Citrus Sinensis ID: 044010

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Local Sequence Feature Prediction

Residue Number Marker
--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120-------130-------140-------150-------160-------170-------180-------190-------200-------210-------220-------230-------240-------25
Protein Sequence
MDLINKFLNLVAPPFTLFSLCLFLPPFLCYKFLLSVFNSIFSEDVSGKVVIITGASSGIGEHLAYEYARRGACLALCARREKSLEEVADTAREIGSPDVITIRADVSKVDDCRSLVEETMNHFGRLDHLVNNAGISSVALFEDIVNITDFKQIMNINFWGSVYTTRFAVPHLRYTKGKIVVLSSAASWLTAPRMSFYNASKAALVLFFETLRVELGSDVGVTIVTPGFIESELTQGKFLTGRRQNSDR
Secondary Structure (PSIPRED)
cHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcccccccccEEEEEccccHHHHHHHHHHHHcccEEEEEcccHHHHHHHHHHHHHcccccEEEEEcccccHHHHHHHHHHHHHHcccccEEEEcccccccccccccccHHHHHHHHHHHcHHHHHHHHHHHHHHHHcccEEEEEcccccccccccHHHHHHHHHHHHHHHHHHHHHHcccccEEEEEccccccccccccccccccccccc
Secondary Structure Prediction (SSPRO)
cHHHHHHHHHHccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcccccEEEEcccccHHHHHHHHHHHHcccEEEEEEcccHHHHHHHHHHHHHccccEEEEEcccccHHHHHHHHHHHHHHHccccEEEEcccccccccHHHcccHHHHHHHHHHHHHHHHHHHHHHHHHHHHcccEEEEEEEHHEccccccHHHHHHHHHHHHHHHHHHHHHHccccEEEEEccccEEccccHcccHHHHHHHHcc
Coil and Loop (DISEMBL)
MDLINKFlnlvappftlfslclflppflcYKFLLSVFNSifsedvsgKVVIITGASSGIGEHLAYEYARRGACLALCARREKSLEEVADTAreigspdvitiradvskvddCRSLVEETMNHFGRLDHlvnnagissvaLFEDIVNITDFKQIMNINFWgsvyttrfavphlrytKGKIVVLSSAaswltaprmsfYNASKAALVLFFETLRVELgsdvgvtivtpgfieseltqgkfltgrrqnsdr
Flexible Loop (DISEMBL)
MDLINKFLNLVAPPFTLFSLCLFLPPFLCYKFLLSVFNSIFSEDVSGKVVIITGASSGIGEHLAYEYARRGACLALCARREKSLEEVadtareigspdvitiradvskVDDCRSLVEETMNHFGRLDHLVNNAGISSVALFEDIVNITDFKQIMNINFWGSVYTTRFAVPHLRYTKGKIVVLSSAASWLTAPRMSFYNASKAALVLFFETLRVELGSDVGVTIVTpgfieseltqgkfltgrrqnsdr
Low Complexity Region (SEG)
MDLINKFLNLVAppftlfslclflppflcykfllSVFNSIFSEDVSGKVVIITGASSGIGEHLAYEYarrgaclalcarrEKSLEEVADTAREIGSPDVITIRADVSKVDDCRSLVEETMNHFGRLDHLVNNAGISSVALFEDIVNITDFKQIMNINFWGSVYTTRFAVPHLRYTKGKIVVLSSAASWLTAPRMSFYNASKAALVLFFETLRVELGSDVGVTIVTPGFIESELTQGKFLTGRRQNSDR
Disordered region (IsUnstruct)
**LINKFLNLVAPPFTLFSLCLFLPPFLCYKFLLSVFNSIFSEDVSGKVVIITGASSGIGEHLAYEYARRGACLALCARREKSLEEVADTAREIGSPDVITIRADVSKVDDCRSLVEETMNHFGRLDHLVNNAGISSVALFEDIVNITDFKQIMNINFWGSVYTTRFAVPHLRYTKGKIVVLSSAASWLTAPRMSFYNASKAALVLFFETLRVELGSDVGVTIVTPGFIESELTQGKF**********
Disordered Region (DISOPRED)
*DLINKFLNLVAPPFTLFSLCLFLPPFLCYKFLLSVFNSIFSEDVSGKVVIITGASSGIGEHLAYEYARRGACLALCARREKSLEEVADTAREIGSPDVITIRADVSKVDDCRSLVEETMNHFGRLDHLVNNAGISSVALFEDIVNITDFKQIMNINFWGSVYTTRFAVPHLRYTKGKIVVLSSAASWLTAPRMSFYNASKAALVLFFETLRVELGSDVGVTIVTPGFIESEL***************
Disordered Region (DISEMBL)
MDLINKFLNLVAPPFTLFSLCLFLPPFLCYKFLLSVFNSIFSEDVSGKVVIITGASSGIGEHLAYEYARRGACLALCARREKSLEEVADTAREIGSPDVITIRADVSKVDDCRSLVEETMNHFGRLDHLVNNAGISSVALFEDIVNITDFKQIMNINFWGSVYTTRFAVPHLRYTKGKIVVLSSAASWLTAPRMSFYNASKAALVLFFETLRVELGSDVGVTIVTPGFIESELTQGKF**********
Disordered Region (DISPRO)
MDLINKFLNLVAPPFTLFSLCLFLPPFLCYKFLLSVFNSIFSEDVSGKVVIITGASSGIGEHLAYEYARRGACLALCARREKSLEEVADTAREIGSPDVITIRADVSKVDDCRSLVEETMNHFGRLDHLVNNAGISSVALFEDIVNITDFKQIMNINFWGSVYTTRFAVPHLRYTKGKIVVLSSAASWLTAPRMSFYNASKAALVLFFETLRVELGSDVGVTIVTPGFIESELTQGKFLTGRRQ*S**
Transmembrane Helix (TMHMM)
iiiiiiHHHHHHHHHHHHHHHHHHHHHHHooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
Transmembrane Helix (HMMTOP)
iiiiiiHHHHHHHHHHHHHHHHHHooooooooooooooooooooHHHHHHHHHHHHHHHHHHHHiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiHHHHHHHHHHHHHHHHHHHHooooooooooooooooooooooooooooooHHHHHHHHHHHHHHHHHHHiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiii
Transmembrane Helix (MEMSAT)
ooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooHHHHHHHHHHHHHHHHHHHHiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiii
TM Helix, Signal Peptide (MEMSAT_SVM)
oooooooooooHHHHHHHHHHHHHHHHHHHHHHHiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiii
TM Helix, Signal Peptide (Phobius)
iiiiiiHHHHHHHHHHHHHHHHHHHHHHoooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
Signal Peptide (SignalP HMM Mode)
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Signal Peptide (SignalP NN Mode)
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Coiled Coils (COILS)
MDLINKFLNLVAPPFTLFSLCLFLPPFLCYKFLLSVFNSIFSEDVSGKVVIITGASSGIGEHLAYEYARRGACLALCARREKSLEEVADTAREIGSPDVITIRADVSKVDDCRSLVEETMNHFGRLDHLVNNAGISSVALFEDIVNITDFKQIMNINFWGSVYTTRFAVPHLRYTKGKIVVLSSAASWLTAPRMSFYNASKAALVLFFETLRVELGSDVGVTIVTPGFIESELTQGKFLTGRRQNSDR
Positional Conservation
no confident homologs detected

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Close Homologs for Annotation Transfer

Close Homologs in SWISS-PROT Database Detected by BLAST

Original result of BLAST against SWISS-PROT Database

ID	Length	Definition	RBH(Q2H)	RBH(H2Q)	Q cover	H cover	Identity	E-value
Query	248	2.2.26 [Sep-21-2011]
A4IGM4	286	Hydroxysteroid 11-beta-de	no	no	0.778	0.674	0.371	5e-27
Q8T197	316	Dehydrogenase/reductase S	yes	no	0.923	0.724	0.352	5e-27
Q6P7J1	291	Hydroxysteroid 11-beta-de	N/A	no	0.842	0.718	0.357	4e-26
Q9CXR1	338	Dehydrogenase/reductase S	yes	no	0.782	0.573	0.358	2e-25
Q49WS9	246	Uncharacterized oxidoredu	yes	no	0.75	0.756	0.372	2e-25
Q7SYS6	291	Hydroxysteroid 11-beta-de	N/A	no	0.850	0.725	0.337	4e-25
Q6PUF3	287	Hydroxysteroid 11-beta-de	yes	no	0.838	0.724	0.350	7e-25
Q7Q732	317	Dehydrogenase/reductase S	no	no	0.826	0.646	0.358	1e-24
O32291	356	Uncharacterized oxidoredu	yes	no	0.75	0.522	0.373	2e-24
Q6PUF4	287	Hydroxysteroid 11-beta-de	no	no	0.854	0.738	0.354	2e-24

>sp|A4IGM4|DHI1L_XENTR Hydroxysteroid 11-beta-dehydrogenase 1-like protein OS=Xenopus tropicalis GN=hsd11b1l PE=2 SV=1

 Score =  121 bits (303), Expect = 5e-27,   Method: Compositional matrix adjust.
 Identities = 74/199 (37%), Positives = 117/199 (58%), Gaps = 6/199 (3%)

Query: 38  NSIFSEDVSGKVVIITGASSGIGEHLAYEYARRGACLALCARREKSLEEVADTAREIGSP 97
           +S   E ++   V++TGAS+GIGE +AY YAR GA L L ARRE +L+EV     E+G+ 
Sbjct: 23  DSFDPETLANTRVLVTGASTGIGEEIAYHYARAGAKLVLTARREHALQEVKSRCLELGAK 82

Query: 98  DVITIRADVSKVDDCRSLVEETMNHFGRLDHLV-NNAGISSVALFEDIVNITDFKQIMNI 156
           +V  + AD++  +    +V E ++  G LD+LV N+ G +   +++  VN T  + +M +
Sbjct: 83  NVFLVVADMASHNAREQVVAEALSALGGLDYLVLNHIGWTPFKMWDGDVNHT--RWLMEV 140

Query: 157 NFWGSVYTTRFAVPHLRYTKGKIVVLSSAASWLTAPRMSFYNASKAALVLFFETLRVEL- 215
           NF   ++    A+P+L  +KG I+VLSS  +    P  + Y ASK AL  FF +LR EL 
Sbjct: 141 NFLSYIHLATAALPYLTQSKGSIIVLSSLTAKTPIPYTTSYAASKFALEGFFSSLRHELT 200

Query: 216 --GSDVGVTIVTPGFIESE 232
              + V +T+   G I+++
Sbjct: 201 MQNNPVSITLCILGLIDTQ 219

Xenopus tropicalis (taxid: 8364)
EC: 1EC: .EC: 1EC: .EC: 1EC: .EC: -

>sp|Q8T197|DHRS7_DICDI Dehydrogenase/reductase SDR family protein 7-like OS=Dictyostelium discoideum GN=DDB_G0274201 PE=3 SV=1

 Score =  121 bits (303), Expect = 5e-27,   Method: Compositional matrix adjust.
 Identities = 88/250 (35%), Positives = 141/250 (56%), Gaps = 21/250 (8%)

Query: 8   LNLVAPPFTL-FSLCLFLPPFLCYKFLLSVFNSIFSEDVSGKVVIITGASSGIGEHLAYE 66
           ++++ P  +L F  C F+ P L  K   S  N         KVVIITGASSGIG  LA +
Sbjct: 21  VSIILPIASLYFIYCNFIAPKLREKPESSYKN---------KVVIITGASSGIGAELAKK 71

Query: 67  YARRGACLALCARREKSLEEV-----ADTAREIGSPDVITIRADVSKVDDCRSLVEETMN 121
           YAR G  + + ARR   LE+V      D +R +   D++ I+ D++ +DDC+++VE+ + 
Sbjct: 72  YARLGCKVTIVARRLDQLEKVKSSFLKDYSR-VNDDDILVIKGDLTLIDDCKNMVEKVIE 130

Query: 122 HFGRLDHLVNNAGISSVALFEDIV-NITDFKQIMNINFWGSVYTTRFAVPHLRYTKGKIV 180
            + ++D  V NAG  S+  F  +  +I+ ++  M +N++  V  T     +L  + G I+
Sbjct: 131 KWSKIDICVWNAGSGSLIEFSKLQGDISIYRDNMELNYFSLVNCTHLVYKYLEQSHGSII 190

Query: 181 VLSS-AASWLTAPRMSFYNASKAALVLFFETLRVELGSDVGVTIVTPGFIESELTQG-KF 238
           V+SS A  + TA R S Y++SK A++ FF +LR E   ++ +TIV PGFI +E     K 
Sbjct: 191 VISSLAGKFGTALRTS-YSSSKHAVMGFFNSLRNET-KNIQITIVCPGFILTEFHDNLKT 248

Query: 239 LTGRRQNSDR 248
           L G++   ++
Sbjct: 249 LDGKQVERNK 258

Putative oxidoreductase.

Dictyostelium discoideum (taxid: 44689)

EC: 1

EC: .

EC: 1

EC: .

EC: -

EC: .

EC: -

>sp|Q6P7J1|DHI1A_XENLA Hydroxysteroid 11-beta-dehydrogenase 1-like protein A OS=Xenopus laevis GN=hsd11b1l-a PE=2 SV=1

 Score =  118 bits (295), Expect = 4e-26,   Method: Compositional matrix adjust.
 Identities = 79/221 (35%), Positives = 124/221 (56%), Gaps = 12/221 (5%)

Query: 17  LFSLCLFLPPFLCYKFLLSVFNSIFSEDVSGKVVIITGASSGIGEHLAYEYARRGACLAL 76
           L SLC+    +  Y F  S   S+  E V GK V+ITG+S+GIGE +AYE+AR GA + +
Sbjct: 8   LLSLCV---GYTAYHFYSS--ESMNPESVRGKRVLITGSSTGIGEQIAYEFARMGAHIMV 62

Query: 77  CARREKSLEEVADTAREIGSPDVITIRADVSKVDDCRSLVEETMNHFGRLDHLVNN--AG 134
            ARR + L+EVA+   ++G+     + +D+  +   + + +E +N  G LD+LV N   G
Sbjct: 63  TARRLQRLQEVANECLKLGAASAHYVASDMGNLTSAQYVAQEAVNKLGGLDYLVLNHIGG 122

Query: 135 ISSVALFEDIVNITDFKQIMNINFWGSVYTTRFAVPHLRYTKGKIVVLSSAASWLTAPRM 194
            +S   F+    +      + INF   V  T  A+  L+ ++G IVV+SS +  + AP  
Sbjct: 123 SASFGFFKG--EMDPVVGSIYINFLSYVQLTSAALKALQESQGSIVVMSSMSGRIGAPFT 180

Query: 195 SFYNASKAALVLFFETLRVELG---SDVGVTIVTPGFIESE 232
           + Y ASK AL  F+ +LR E     S++ VT+   G+I++E
Sbjct: 181 TSYCASKFALEGFYSSLRREFALQNSNMSVTVAVLGYIDTE 221

Xenopus laevis (taxid: 8355)

EC: 1

EC: .

EC: 1

EC: .

EC: 1

EC: .

EC: -

>sp|Q9CXR1|DHRS7_MOUSE Dehydrogenase/reductase SDR family member 7 OS=Mus musculus GN=Dhrs7 PE=2 SV=2

 Score =  116 bits (290), Expect = 2e-25,   Method: Compositional matrix adjust.
 Identities = 72/201 (35%), Positives = 114/201 (56%), Gaps = 7/201 (3%)

Query: 44  DVSGKVVIITGASSGIGEHLAYEYARRGACLALCARREKSLEEVADTAREIGS---PDVI 100
           +++  VV +TGASSGIGE LA++ ++ G  L L ARR + LE V     E G+    D++
Sbjct: 47  ELTDMVVWVTGASSGIGEELAFQLSKLGVSLVLSARRAQELERVKRRCLENGNLKEKDIL 106

Query: 101 TIRADVSKVDDCRSLVEETMNHFGRLDHLVNNAGISSVALFEDIVNITDFKQIMNINFWG 160
            +  D++      +  +  +  FG++D LVNN G S  +L  +  N+  FK+++N+N+ G
Sbjct: 107 VLPLDLTDTSSHEAATKAVLQEFGKIDILVNNGGRSQRSLVLE-TNLDVFKELINLNYIG 165

Query: 161 SVYTTRFAVPHL-RYTKGKIVVLSSAASWLTAPRMSFYNASKAALVLFFETLRVELGSDV 219
           +V  T+  +PH+    +GKIV ++S A   +    S Y ASK AL  FF  L  ELG   
Sbjct: 166 TVSLTKCVLPHMIERKQGKIVTVNSIAGIASVSLSSGYCASKHALRGFFNALHSELGQYP 225

Query: 220 GVTI--VTPGFIESELTQGKF 238
           G+T   V PG ++S++ +  F
Sbjct: 226 GITFCNVYPGPVQSDIVKNAF 246

Mus musculus (taxid: 10090)

EC: 1

EC: .

EC: 1

EC: .

EC: -

EC: .

EC: -

>sp|Q49WS9|Y1627_STAS1 Uncharacterized oxidoreductase SSP1627 OS=Staphylococcus saprophyticus subsp. saprophyticus (strain ATCC 15305 / DSM 20229) GN=SSP1627 PE=3 SV=1

 Score =  115 bits (289), Expect = 2e-25,   Method: Compositional matrix adjust.
 Identities = 73/196 (37%), Positives = 112/196 (57%), Gaps = 10/196 (5%)

Query: 44  DVSGKVVIITGASSGIGEHLAYEYARRGACLALCARREKSLEEVADTAREIGSPDVITIR 103
           +V  KVV+ITGASSGIGE      +  GA L L ARR   LE++    +++G   V   +
Sbjct: 3   NVKDKVVVITGASSGIGEETVNLLSENGAKLVLGARRLDRLEKIQ---QKVGHDSVSIKK 59

Query: 104 ADVSKVDDCRSLVEETMNHFGRLDHLVNNAGISSVALFEDIVNITD-FKQIMNINFWGSV 162
            DV+K D+  +L+E   N FGR+D L+NNAG+   +  E   N  D + Q++++N  G +
Sbjct: 60  TDVTKPDEVNALIETAYNDFGRIDVLINNAGLMPQSFLEK--NKQDEWNQMIDVNIKGVL 117

Query: 163 YTTRFAVPHLRYTK-GKIVVLSSAASWLTAPRMSFYNASKAALVLFFETLRVE---LGSD 218
           Y     +P++R  K G I+ L+S A  +  P  + Y  +K A+    E LR E   +GS+
Sbjct: 118 YGIGAVLPYMRKQKSGHIINLASVAGHVVFPGSAVYCGTKYAVRAITEGLRQEEAIVGSN 177

Query: 219 VGVTIVTPGFIESELT 234
           +  TI++PG + +ELT
Sbjct: 178 IRTTILSPGAVSTELT 193

Staphylococcus saprophyticus subsp. saprophyticus (strain ATCC 15305 / DSM 20229) (taxid: 342451)

EC: 1

EC: .

EC: -

EC: .

EC: -

EC: .

EC: -

>sp|Q7SYS6|DHI1B_XENLA Hydroxysteroid 11-beta-dehydrogenase 1-like protein B OS=Xenopus laevis GN=hsd11b1l-b PE=2 SV=1

 Score =  115 bits (287), Expect = 4e-25,   Method: Compositional matrix adjust.
 Identities = 74/219 (33%), Positives = 120/219 (54%), Gaps = 8/219 (3%)

Query: 17  LFSLCLFLPPFLCYKFLLSVFNSIFSEDVSGKVVIITGASSGIGEHLAYEYARRGACLAL 76
           L SLC+    ++ Y F  +   S+  E V GK V+ITG+S+G+GE +AYE+AR GA + +
Sbjct: 8   LLSLCV---GYIAYYFFRT--ESMNKESVRGKRVLITGSSTGLGEQIAYEFARMGAHIMI 62

Query: 77  CARREKSLEEVADTAREIGSPDVITIRADVSKVDDCRSLVEETMNHFGRLDHLVNNAGIS 136
            ARR + L+EVA    ++G+     + +D+  ++  +S+ +E +   G LD+LV N    
Sbjct: 63  TARRLQQLQEVASQCMKLGAASAHYVASDMGNLESAQSVAQEAVVKLGGLDYLVLNHIGG 122

Query: 137 SVALFEDIVNITDFKQIMNINFWGSVYTTRFAVPHLRYTKGKIVVLSSAASWLTAPRMSF 196
           S        ++        +NF   V  T  A+  L+ ++G IVV+SS +  + AP  + 
Sbjct: 123 SGGFGFFKGDMDPVVGSTTVNFLSYVQLTSSALSALQESQGSIVVISSMSGRIGAPFTTS 182

Query: 197 YNASKAALVLFFETLRVELG---SDVGVTIVTPGFIESE 232
           Y ASK AL  F+ +LR E     S + VT+   G+I++E
Sbjct: 183 YCASKFALEGFYSSLRREFALQNSKMSVTVAVLGYIDTE 221

Xenopus laevis (taxid: 8355)

EC: 1

EC: .

EC: 1

EC: .

EC: 1

EC: .

EC: -

>sp|Q6PUF3|DHI1L_DANRE Hydroxysteroid 11-beta-dehydrogenase 1-like protein OS=Danio rerio GN=hsd11b1l PE=2 SV=1

 Score =  114 bits (285), Expect = 7e-25,   Method: Compositional matrix adjust.
 Identities = 76/217 (35%), Positives = 116/217 (53%), Gaps = 9/217 (4%)

Query: 20  LCLFLPPFLCYKFLLSVFNSIFSEDVSGKVVIITGASSGIGEHLAYEYARRGACLALCAR 79
           LC     F+  ++    FN    E + G  V++TGAS+GIGE LAY YAR GA + + AR
Sbjct: 9   LCSICVAFIAVRWSAPSFNE---ESLKGARVLVTGASTGIGEQLAYHYARLGAQIVITAR 65

Query: 80  REKSLEEVADTAREIGSPDVITIRADVSKVDDCRSLVEETMNHFGRLDHLV-NNAGISSV 138
           R   LE+V    RE+G+     I AD++   D   +V+  +   G LD+LV N+ G S  
Sbjct: 66  RGNVLEQVVSKCREMGAQKAFYIPADMANPSDADLVVKYAIEQLGGLDYLVLNHIGPSPY 125

Query: 139 ALFEDIVNITDFKQIMNINFWGSVYTTRFAVPHLRYTKGKIVVLSSAASWLTAPRMSFYN 198
            +++  V  T  + ++ +NF   +   + A+P L  +KG IVV+SS    +  P    Y 
Sbjct: 126 QMWDGDVQHT--RWLLEVNFLSYLQMAQKALPTLEKSKGSIVVVSSLLGKICGPFALPYA 183

Query: 199 ASKAALVLFFETLRVELG---SDVGVTIVTPGFIESE 232
           ++K AL  FF  L+ EL    S+V +TI   G I+++
Sbjct: 184 STKFALNGFFGGLQNELAMQKSNVSITICILGLIDTD 220

Danio rerio (taxid: 7955)

EC: 1

EC: .

EC: 1

EC: .

EC: 1

EC: .

EC: -

>sp|Q7Q732|DHRS7_ANOGA Dehydrogenase/reductase SDR family protein 7-like OS=Anopheles gambiae GN=AGAP005532 PE=3 SV=3

 Score =  113 bits (282), Expect = 1e-24,   Method: Compositional matrix adjust.
 Identities = 82/229 (35%), Positives = 124/229 (54%), Gaps = 24/229 (10%)

Query: 22  LFLP---PFLCYKFLLSVFNSIFSEDVSGKVVIITGASSGIGEHLAYEYARRGACLALCA 78
           LFLP   P L  K L  +     +  ++GKVV+ITGASSG+GE LA+ +   G  + L A
Sbjct: 20  LFLPIAIPGLVLKLLTMMKEQRNARHLNGKVVLITGASSGLGEALAHSFFLAGCKVVLAA 79

Query: 79  RREKSLEEVADTAREIGS-----PDVITIRADVSKVDDCRSLVEETMNHFGRLDHLVNNA 133
           RR+  LE V     E+ +     P +I +  D+S ++     V+  +   G +D LVNN 
Sbjct: 80  RRKDELERVRKDLLELHATVPTHPPII-LPLDLSDLNSIGGKVQSVLEIHGAIDILVNNG 138

Query: 134 GIS------SVALFEDIVNITDFKQIMNINFWGSVYTTRFAVPHLRYTK-GKIVVLSSAA 186
           GIS      S A+  DI       +IM +N++GSV  T+  +P +   K G+IV +SS  
Sbjct: 139 GISVRGDALSTAIDVDI-------RIMLVNYFGSVALTKACLPSMMARKEGRIVSISSVQ 191

Query: 187 SWLTAPRMSFYNASKAALVLFFETLRVELGSD-VGVTIVTPGFIESELT 234
                P  S Y+ASK A+  F ++LR E+  D + VT+++PG+I + L+
Sbjct: 192 GKFAIPHRSAYSASKHAMQAFCDSLRAEVAKDNIKVTLISPGYINTALS 240

Putative oxidoreductase.

Anopheles gambiae (taxid: 7165)

EC: 1

EC: .

EC: 1

EC: .

EC: -

EC: .

EC: -

>sp|O32291|YXNA_BACSU Uncharacterized oxidoreductase YxnA OS=Bacillus subtilis (strain 168) GN=yxnA PE=3 SV=2

 Score =  112 bits (281), Expect = 2e-24,   Method: Compositional matrix adjust.
 Identities = 72/193 (37%), Positives = 109/193 (56%), Gaps = 7/193 (3%)

Query: 48  KVVIITGASSGIGEHLAYEYARRGACLALCARREKSLEEVADTAREIGSPDVITIRADVS 107
           +V++ITGASSGIG   A   A +GA +   AR E++L+E+ D  +E G  D I ++ADV 
Sbjct: 32  QVIVITGASSGIGLVTARMAAEKGAKVVAAARNEEALKELTDELKEKGH-DAIWVKADVG 90

Query: 108 KVDDCRSLVEETMNHFGRLDHLVNNAGISSVALFEDIVNITDFKQIMNINFWGSVYTTRF 167
           K +D   + E  ++ FGR D  VNNA +S+     D V + D K++ + NFWG VY TR 
Sbjct: 91  KEEDVNRIAETAISTFGRFDTWVNNAAVSTFGHAMD-VTVEDMKRMFDTNFWGPVYGTRA 149

Query: 168 AVPHL--RYTKGKIVVLSSAASWLTAPRMSFYNASKAALVLFFETLRVELGSD---VGVT 222
           AV H   R   G ++ + S          S Y ++K AL  + E++R+EL  +   V VT
Sbjct: 150 AVKHYTGRGVPGALINVGSLFGDRGTVIQSTYASAKFALHGWTESIRMELEKEQAPVSVT 209

Query: 223 IVTPGFIESELTQ 235
           ++ PG I++   +
Sbjct: 210 LIHPGRIDTPYNE 222

Bacillus subtilis (strain 168) (taxid: 224308)

EC: 1

EC: .

EC: -

EC: .

EC: -

EC: .

EC: -

>sp|Q6PUF4|DHI1L_CHICK Hydroxysteroid 11-beta-dehydrogenase 1-like protein OS=Gallus gallus GN=HSD11B1L PE=2 SV=1

 Score =  112 bits (280), Expect = 2e-24,   Method: Compositional matrix adjust.
 Identities = 82/231 (35%), Positives = 123/231 (53%), Gaps = 19/231 (8%)

Query: 24  LPPF---LCYKFLLSVFNSIF------SEDVSGKVVIITGASSGIGEHLAYEYARRGACL 74
           + PF   LC    L+V  + F       E +SG  V++TGAS+GIGE +AY YA  GA +
Sbjct: 2   MKPFGKVLCAAGSLAVLLAFFWRDTFQPEQLSGARVLLTGASAGIGEQMAYHYATFGAEI 61

Query: 75  ALCARREKSLEEVADTAREIGSPDVITIRADVSKVDDCRSLVEETMNHFGRLDHLV-NNA 133
            L ARRE  L+EV      +G+  V  I AD+S   +   +V+  + + G LD+LV N+ 
Sbjct: 62  VLTARREAVLQEVMKKCLTLGAKKVFYIPADMSSPSEPDRVVQFAVQNLGGLDYLVLNHI 121

Query: 134 GISSVALFEDIVNITDFKQIMNINFWGSVYTTRFAVPHLRYTKGKIVVLSSAASWLTAPR 193
           G+S   ++   V  T  + +M +NF+  V     A+P L    G +VV+SS    +  P 
Sbjct: 122 GVSPFQMWGGDVEHT--RWLMQVNFFSYVALATAALPTLEKNHGSVVVVSSLTGKIPTPF 179

Query: 194 MSFYNASKAALVLFFETLRVEL---GSDVGVTIVTPGFIES----ELTQGK 237
            + Y+A+K AL  FF +LR EL     +V +T+   G I++    E T+GK
Sbjct: 180 TTSYSATKFALDGFFSSLRHELTMQKRNVSITLCILGLIDTDAALEKTRGK 230

Gallus gallus (taxid: 9031)

EC: 1

EC: .

EC: 1

EC: .

EC: 1

EC: .

EC: -

Close Homologs in the Non-Redundant Database Detected by BLAST

Original result of BLAST against Nonredundant Database

GI	Length	Definition	Q cover	H cover	Identity	E-value
Query	248
255540161	349	Corticosteroid 11-beta-dehydrogenase, pu	0.963	0.684	0.753	1e-101
196122094	349	steroleosin SLO1-1 [Brassica napus]	0.971	0.690	0.697	5e-93
196122096	349	steroleosin SLO1-2 [Brassica napus]	0.971	0.690	0.692	3e-92
134304897	349	short-chain dehydrogenase reductase [Bra	0.971	0.690	0.688	3e-92
18423187	349	hydroxysteroid dehydrogenase 1 [Arabidop	0.971	0.690	0.688	5e-92
124107990	349	short-chain dehydrogenase reductase [Bra	0.971	0.690	0.692	1e-91
297795869	349	short-chain dehydrogenase/reductase fami	0.971	0.690	0.684	3e-91
449454957	349	PREDICTED: dehydrogenase/reductase SDR f	0.971	0.690	0.659	4e-91
449503706	349	PREDICTED: hydroxysteroid 11-beta-dehydr	0.963	0.684	0.661	2e-90
449454959	349	PREDICTED: hydroxysteroid 11-beta-dehydr	0.963	0.684	0.661	3e-90

>gi|255540161|ref|XP_002511145.1| Corticosteroid 11-beta-dehydrogenase, putative [Ricinus communis] gi|223550260|gb|EEF51747.1| Corticosteroid 11-beta-dehydrogenase, putative [Ricinus communis]

 Score =  372 bits (955), Expect = e-101,   Method: Compositional matrix adjust.
 Identities = 180/239 (75%), Positives = 201/239 (84%)

Query: 1   MDLINKFLNLVAPPFTLFSLCLFLPPFLCYKFLLSVFNSIFSEDVSGKVVIITGASSGIG 60
           MDLIN FLNLVAPPFT FSLC  LPP+L YK   SVFN IFSEDV+GKVV+ITGASSGIG
Sbjct: 1   MDLINTFLNLVAPPFTFFSLCFLLPPYLIYKGFSSVFNFIFSEDVTGKVVLITGASSGIG 60

Query: 61  EHLAYEYARRGACLALCARREKSLEEVADTAREIGSPDVITIRADVSKVDDCRSLVEETM 120
           EHLAYEYA+RGACLAL ARREK L +V   A E GSPDV+ I ADV KVDDC  LVEET+
Sbjct: 61  EHLAYEYAKRGACLALVARREKRLRDVVYRAEEYGSPDVLMILADVQKVDDCNRLVEETI 120

Query: 121 NHFGRLDHLVNNAGISSVALFEDIVNITDFKQIMNINFWGSVYTTRFAVPHLRYTKGKIV 180
           +HFGRLDHLVNNAGISS A+ E+I +IT F+ IM+ NFWGS Y T FAVP+LR T+GKI+
Sbjct: 121 SHFGRLDHLVNNAGISSAAMLEEITDITTFRTIMDTNFWGSAYITHFAVPYLRGTRGKII 180

Query: 181 VLSSAASWLTAPRMSFYNASKAALVLFFETLRVELGSDVGVTIVTPGFIESELTQGKFL 239
           V++S+ASWL +PR S YNASKAALV FFETLRVELGSD+ V IVTPGFIESELTQGKFL
Sbjct: 181 VIASSASWLPSPRFSIYNASKAALVAFFETLRVELGSDIHVLIVTPGFIESELTQGKFL 239

Source: Ricinus communis

Species: Ricinus communis

Genus: Ricinus

Family: Euphorbiaceae

Order: Malpighiales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|196122094|gb|ACG69522.1| steroleosin SLO1-1 [Brassica napus]

 Score =  346 bits (888), Expect = 5e-93,   Method: Compositional matrix adjust.
 Identities = 168/241 (69%), Positives = 208/241 (86%)

Query: 1   MDLINKFLNLVAPPFTLFSLCLFLPPFLCYKFLLSVFNSIFSEDVSGKVVIITGASSGIG 60
           M+LIN FLNL AP FT F LC FLPPF  +KF+ S+F++IFSE+V GKVV+ITGASSGIG
Sbjct: 1   MELINDFLNLTAPFFTFFGLCFFLPPFYFFKFVQSIFSTIFSENVYGKVVLITGASSGIG 60

Query: 61  EHLAYEYARRGACLALCARREKSLEEVADTAREIGSPDVITIRADVSKVDDCRSLVEETM 120
           E LAYEYA +GACLAL ARR+  LEEVA+ ARE+GSP+V+T+ ADVSK DDCR +V+ET+
Sbjct: 61  EQLAYEYASKGACLALTARRKNRLEEVAEIAREVGSPNVVTVHADVSKPDDCRRIVDETI 120

Query: 121 NHFGRLDHLVNNAGISSVALFEDIVNITDFKQIMNINFWGSVYTTRFAVPHLRYTKGKIV 180
           +HFGRLDHLVNNAGI  +++FE+I  IT  + +M+ NFWG+VYTTR A+P+LR + GKIV
Sbjct: 121 SHFGRLDHLVNNAGIMQISMFENIEEITRTRAVMDTNFWGAVYTTRAALPYLRQSNGKIV 180

Query: 181 VLSSAASWLTAPRMSFYNASKAALVLFFETLRVELGSDVGVTIVTPGFIESELTQGKFLT 240
            +SS+A+WLTAPRMSFYNASKAAL+ FFETLR+ELGSDV +TIVTPG+IESELTQGK+++
Sbjct: 181 AMSSSAAWLTAPRMSFYNASKAALLNFFETLRIELGSDVHITIVTPGYIESELTQGKYVS 240

Query: 241 G 241
           G
Sbjct: 241 G 241

Source: Brassica napus

Species: Brassica napus

Genus: Brassica

Family: Brassicaceae

Order: Brassicales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|196122096|gb|ACG69523.1| steroleosin SLO1-2 [Brassica napus]

 Score =  343 bits (881), Expect = 3e-92,   Method: Compositional matrix adjust.
 Identities = 167/241 (69%), Positives = 206/241 (85%)

Query: 1   MDLINKFLNLVAPPFTLFSLCLFLPPFLCYKFLLSVFNSIFSEDVSGKVVIITGASSGIG 60
           M+LIN F NL AP FT F LC FLPPF  +KF+ S+F++IFSE++ GKVV+ITGASSGIG
Sbjct: 1   MELINDFFNLTAPFFTFFGLCFFLPPFYFFKFVQSIFSTIFSENLYGKVVLITGASSGIG 60

Query: 61  EHLAYEYARRGACLALCARREKSLEEVADTAREIGSPDVITIRADVSKVDDCRSLVEETM 120
           E LAYEYA +GACLAL ARR+  LEEVA+ ARE+GSP+V+T+ ADVSK DDCR +V+ET+
Sbjct: 61  EQLAYEYASKGACLALTARRKNRLEEVAEIAREVGSPNVVTVHADVSKPDDCRRIVDETI 120

Query: 121 NHFGRLDHLVNNAGISSVALFEDIVNITDFKQIMNINFWGSVYTTRFAVPHLRYTKGKIV 180
           +HFGRLDHLVNNAGI  +++FE+I  IT  + +M+ NFWGSVYTTR A+P+LR + GKIV
Sbjct: 121 SHFGRLDHLVNNAGIMQISMFENIEEITRTRAVMDTNFWGSVYTTRAALPYLRQSNGKIV 180

Query: 181 VLSSAASWLTAPRMSFYNASKAALVLFFETLRVELGSDVGVTIVTPGFIESELTQGKFLT 240
            +SS+A+WLTAPRMSFYNASKAAL+ FFETLR+ELGSDV +TIVTPG+IESELTQGK+ +
Sbjct: 181 AMSSSAAWLTAPRMSFYNASKAALLNFFETLRIELGSDVHITIVTPGYIESELTQGKYFS 240

Query: 241 G 241
           G
Sbjct: 241 G 241

Source: Brassica napus

Species: Brassica napus

Genus: Brassica

Family: Brassicaceae

Order: Brassicales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|134304897|gb|ABO71657.1| short-chain dehydrogenase reductase [Brassica napus]

 Score =  343 bits (881), Expect = 3e-92,   Method: Compositional matrix adjust.
 Identities = 166/241 (68%), Positives = 206/241 (85%)

Query: 1   MDLINKFLNLVAPPFTLFSLCLFLPPFLCYKFLLSVFNSIFSEDVSGKVVIITGASSGIG 60
           M+LIN FLNL AP FT F  C FLPPF  +KF+ S+F++IFSE+V GKVV+ITGASSGIG
Sbjct: 1   MELINDFLNLTAPFFTFFGPCFFLPPFYFFKFVQSIFSTIFSENVYGKVVLITGASSGIG 60

Query: 61  EHLAYEYARRGACLALCARREKSLEEVADTAREIGSPDVITIRADVSKVDDCRSLVEETM 120
           E LAYEYA +GACLAL ARR+  LEEVA+ ARE+GSP+V+T+ ADVSK DDCR +V+ET+
Sbjct: 61  EQLAYEYASKGACLALTARRKNRLEEVAEIAREVGSPNVVTVHADVSKPDDCRRIVDETI 120

Query: 121 NHFGRLDHLVNNAGISSVALFEDIVNITDFKQIMNINFWGSVYTTRFAVPHLRYTKGKIV 180
           +HFGRLDHLVNNAGI  +++FE+I  IT  + +M+ NFWG+VYTTR A+P+LR + GKIV
Sbjct: 121 SHFGRLDHLVNNAGIMQISMFENIEEITRTRAVMDTNFWGAVYTTRAALPYLRQSNGKIV 180

Query: 181 VLSSAASWLTAPRMSFYNASKAALVLFFETLRVELGSDVGVTIVTPGFIESELTQGKFLT 240
            +SS+A+WLTAPRMS YNASKAAL+ FFETLR+ELGSDV +TIVTPG+IESELTQGK+++
Sbjct: 181 AMSSSAAWLTAPRMSLYNASKAALLNFFETLRIELGSDVHITIVTPGYIESELTQGKYVS 240

Query: 241 G 241
           G
Sbjct: 241 G 241

Source: Brassica napus

Species: Brassica napus

Genus: Brassica

Family: Brassicaceae

Order: Brassicales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|18423187|ref|NP_568742.1| hydroxysteroid dehydrogenase 1 [Arabidopsis thaliana] gi|22327700|ref|NP_680418.1| hydroxysteroid dehydrogenase 1 [Arabidopsis thaliana] gi|17386150|gb|AAL38621.1|AF446888_1 AT5g50700/MFB16_9 [Arabidopsis thaliana] gi|8777393|dbj|BAA96983.1| 11-beta-hydroxysteroid dehydrogenase-like [Arabidopsis thaliana] gi|9758769|dbj|BAB09145.1| 11-beta-hydroxysteroid dehydrogenase-like [Arabidopsis thaliana] gi|15450585|gb|AAK96564.1| AT5g50700/MFB16_9 [Arabidopsis thaliana] gi|17065384|gb|AAL32846.1| 11-beta-hydroxysteroid dehydrogenase-like [Arabidopsis thaliana] gi|20148649|gb|AAM10215.1| 11-beta-hydroxysteroid dehydrogenase-like [Arabidopsis thaliana] gi|62320743|dbj|BAD95411.1| 11-beta-hydroxysteroid dehydrogenase-like [Arabidopsis thaliana] gi|332008584|gb|AED95967.1| hydroxysteroid dehydrogenase 1 [Arabidopsis thaliana] gi|332008598|gb|AED95981.1| hydroxysteroid dehydrogenase 1 [Arabidopsis thaliana]

 Score =  343 bits (879), Expect = 5e-92,   Method: Compositional matrix adjust.
 Identities = 166/241 (68%), Positives = 207/241 (85%)

Query: 1   MDLINKFLNLVAPPFTLFSLCLFLPPFLCYKFLLSVFNSIFSEDVSGKVVIITGASSGIG 60
           M+LIN FLNL AP FT F LC FLPPF  +KFL S+F++IFSE++ GKVV+ITGASSGIG
Sbjct: 1   MELINDFLNLTAPFFTFFGLCFFLPPFYFFKFLQSIFSTIFSENLYGKVVLITGASSGIG 60

Query: 61  EHLAYEYARRGACLALCARREKSLEEVADTAREIGSPDVITIRADVSKVDDCRSLVEETM 120
           E LAYEYA RGACLAL ARR+  LEEVA+ ARE+GSP+V+T+ ADVSK DDCR +V++T+
Sbjct: 61  EQLAYEYACRGACLALTARRKNRLEEVAEIARELGSPNVVTVHADVSKPDDCRRIVDDTI 120

Query: 121 NHFGRLDHLVNNAGISSVALFEDIVNITDFKQIMNINFWGSVYTTRFAVPHLRYTKGKIV 180
            HFGRLDHLVNNAG++ +++FE+I +IT  K +++ NFWGSVYTTR A+P+LR + GKIV
Sbjct: 121 THFGRLDHLVNNAGMTQISMFENIEDITRTKAVLDTNFWGSVYTTRAALPYLRQSNGKIV 180

Query: 181 VLSSAASWLTAPRMSFYNASKAALVLFFETLRVELGSDVGVTIVTPGFIESELTQGKFLT 240
            +SS+A+WLTAPRMSFYNASKAAL+ FFET+R+ELG DV +TIVTPG+IESELTQGK+ +
Sbjct: 181 AMSSSAAWLTAPRMSFYNASKAALLSFFETMRIELGGDVHITIVTPGYIESELTQGKYFS 240

Query: 241 G 241
           G
Sbjct: 241 G 241

Source: Arabidopsis thaliana

Species: Arabidopsis thaliana

Genus: Arabidopsis

Family: Brassicaceae

Order: Brassicales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|124107990|gb|ABM90633.1| short-chain dehydrogenase reductase [Brassica napus] gi|321173854|gb|ADW77633.1| steroleosin-A [Brassica napus] gi|321173856|gb|ADW77634.1| steroleosin-A [Brassica napus]

 Score =  341 bits (875), Expect = 1e-91,   Method: Compositional matrix adjust.
 Identities = 167/241 (69%), Positives = 206/241 (85%)

Query: 1   MDLINKFLNLVAPPFTLFSLCLFLPPFLCYKFLLSVFNSIFSEDVSGKVVIITGASSGIG 60
           M+LIN FLNL AP FT F LC FLPPF   KF+ S+F++I SE+V GKVV+ITGASSGIG
Sbjct: 1   MELINDFLNLTAPFFTFFGLCFFLPPFYFSKFVQSIFSTISSENVYGKVVLITGASSGIG 60

Query: 61  EHLAYEYARRGACLALCARREKSLEEVADTAREIGSPDVITIRADVSKVDDCRSLVEETM 120
           E LAYEYA +GACLAL ARR+  LEEVA+ ARE+GSP+V+T+ ADVSK DDCR +V+ET+
Sbjct: 61  EQLAYEYASKGACLALTARRKNRLEEVAEIAREVGSPNVVTVHADVSKPDDCRRIVDETI 120

Query: 121 NHFGRLDHLVNNAGISSVALFEDIVNITDFKQIMNINFWGSVYTTRFAVPHLRYTKGKIV 180
           +HFGRLDHLVNNAGI  +++FE+I  IT  + +M+ NFWG+VYTTR A+P+LR + GKIV
Sbjct: 121 SHFGRLDHLVNNAGIMQISMFENIEEITRTRAVMDTNFWGAVYTTRAALPYLRQSNGKIV 180

Query: 181 VLSSAASWLTAPRMSFYNASKAALVLFFETLRVELGSDVGVTIVTPGFIESELTQGKFLT 240
            +SS+A+WLTAPRMSFYNASKAAL+ FFETLR+ELGSDV +TIVTPG+IESELTQGK+++
Sbjct: 181 AMSSSAAWLTAPRMSFYNASKAALLNFFETLRIELGSDVHITIVTPGYIESELTQGKYVS 240

Query: 241 G 241
           G
Sbjct: 241 G 241

Source: Brassica napus

Species: Brassica napus

Genus: Brassica

Family: Brassicaceae

Order: Brassicales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|297795869|ref|XP_002865819.1| short-chain dehydrogenase/reductase family protein [Arabidopsis lyrata subsp. lyrata] gi|297311654|gb|EFH42078.1| short-chain dehydrogenase/reductase family protein [Arabidopsis lyrata subsp. lyrata]

 Score =  340 bits (872), Expect = 3e-91,   Method: Compositional matrix adjust.
 Identities = 165/241 (68%), Positives = 206/241 (85%)

Query: 1   MDLINKFLNLVAPPFTLFSLCLFLPPFLCYKFLLSVFNSIFSEDVSGKVVIITGASSGIG 60
           M+LIN FLNL AP FT F LC FLPPF  +KFL S+F++IF E++ GKVV+ITGASSGIG
Sbjct: 1   MELINDFLNLTAPFFTFFGLCFFLPPFYFFKFLQSIFSTIFLENLYGKVVLITGASSGIG 60

Query: 61  EHLAYEYARRGACLALCARREKSLEEVADTAREIGSPDVITIRADVSKVDDCRSLVEETM 120
           E LAYEYA RGACLAL ARR+  LEEVA+ ARE+GSP+V+T+ ADVSK DDCR +V++T+
Sbjct: 61  EQLAYEYACRGACLALTARRKNRLEEVAEIARELGSPNVVTVHADVSKPDDCRRIVDDTI 120

Query: 121 NHFGRLDHLVNNAGISSVALFEDIVNITDFKQIMNINFWGSVYTTRFAVPHLRYTKGKIV 180
            HFGRLDHLVNNAG++ +++FE+I +IT  K +++ NFWGSVYTTR A+P+LR + GKIV
Sbjct: 121 THFGRLDHLVNNAGMTQISMFENIEDITRTKAVLDTNFWGSVYTTRAALPYLRQSNGKIV 180

Query: 181 VLSSAASWLTAPRMSFYNASKAALVLFFETLRVELGSDVGVTIVTPGFIESELTQGKFLT 240
            +SS+A+WLTAPRMSFYNASKAAL+ FFET+R+ELG DV +TIVTPG+IESELTQGK+ +
Sbjct: 181 AMSSSAAWLTAPRMSFYNASKAALLSFFETMRIELGGDVHITIVTPGYIESELTQGKYFS 240

Query: 241 G 241
           G
Sbjct: 241 G 241

Source: Arabidopsis lyrata subsp. lyrata

Species: Arabidopsis lyrata

Genus: Arabidopsis

Family: Brassicaceae

Order: Brassicales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|449454957|ref|XP_004145220.1| PREDICTED: dehydrogenase/reductase SDR family protein 7-like [Cucumis sativus] gi|449470840|ref|XP_004153124.1| PREDICTED: dehydrogenase/reductase SDR family protein 7-like [Cucumis sativus] gi|449503704|ref|XP_004162135.1| PREDICTED: dehydrogenase/reductase SDR family protein 7-like [Cucumis sativus]

 Score =  340 bits (872), Expect = 4e-91,   Method: Compositional matrix adjust.
 Identities = 159/241 (65%), Positives = 194/241 (80%)

Query: 1   MDLINKFLNLVAPPFTLFSLCLFLPPFLCYKFLLSVFNSIFSEDVSGKVVIITGASSGIG 60
           M+LI+ FLNLV+PPFT  SL L LPP+   K  LS+   +F+E+V GKVV+ITGASSGIG
Sbjct: 1   MNLIHSFLNLVSPPFTFISLFLLLPPYQALKSFLSLLGVLFTENVHGKVVLITGASSGIG 60

Query: 61  EHLAYEYARRGACLALCARREKSLEEVADTAREIGSPDVITIRADVSKVDDCRSLVEETM 120
           EHLAYEYA+RGACL L ARR+  LEEVAD AR  GSP VITI+ADVSK +DCR ++ ETM
Sbjct: 61  EHLAYEYAKRGACLVLVARRQNLLEEVADIARYYGSPGVITIKADVSKFEDCRRVINETM 120

Query: 121 NHFGRLDHLVNNAGISSVALFEDIVNITDFKQIMNINFWGSVYTTRFAVPHLRYTKGKIV 180
           N+FGRLDHLVNNA I+ + LFEDI +I  FKQ+M+IN+WG+VY T  A+P+LRY++GKIV
Sbjct: 121 NNFGRLDHLVNNAAITHLVLFEDIADIAAFKQVMDINYWGAVYMTHLAIPYLRYSRGKIV 180

Query: 181 VLSSAASWLTAPRMSFYNASKAALVLFFETLRVELGSDVGVTIVTPGFIESELTQGKFLT 240
            LS+  +WL +PRMS YN+SKAA+   FETLRVEL  ++GVTIVTPGF+ESELTQGK L 
Sbjct: 181 ALSAPPAWLPSPRMSIYNSSKAAIKSMFETLRVELAPEIGVTIVTPGFVESELTQGKALN 240

Query: 241 G 241
            
Sbjct: 241 A 241

Source: Cucumis sativus

Species: Cucumis sativus

Genus: Cucumis

Family: Cucurbitaceae

Order: Cucurbitales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|449503706|ref|XP_004162136.1| PREDICTED: hydroxysteroid 11-beta-dehydrogenase 1-like protein-like [Cucumis sativus]

 Score =  337 bits (864), Expect = 2e-90,   Method: Compositional matrix adjust.
 Identities = 158/239 (66%), Positives = 195/239 (81%)

Query: 1   MDLINKFLNLVAPPFTLFSLCLFLPPFLCYKFLLSVFNSIFSEDVSGKVVIITGASSGIG 60
           M+LI  FLNLV+PP T  SL  FLPP++  K+ L +   IF+EDV+GKVV+ITGASSGIG
Sbjct: 1   MELIKSFLNLVSPPITFVSLGFFLPPYVVLKYFLYLVRGIFTEDVAGKVVLITGASSGIG 60

Query: 61  EHLAYEYARRGACLALCARREKSLEEVADTAREIGSPDVITIRADVSKVDDCRSLVEETM 120
           EHLAY+YA+RGA LAL  RR+  L EVAD AR  GSPDVITI ADVSK+ D R ++ +T+
Sbjct: 61  EHLAYQYAQRGARLALVDRRKSPLHEVADIARYYGSPDVITIPADVSKLQDSRRIIYDTI 120

Query: 121 NHFGRLDHLVNNAGISSVALFEDIVNITDFKQIMNINFWGSVYTTRFAVPHLRYTKGKIV 180
           NHFGRLDHLVNNAG++++ LFE++ +IT F QIM+ N+WGSVYTT+FA+P+LR  +GKI+
Sbjct: 121 NHFGRLDHLVNNAGVANMTLFEEMKDITSFNQIMDTNYWGSVYTTQFAIPYLRNNRGKII 180

Query: 181 VLSSAASWLTAPRMSFYNASKAALVLFFETLRVELGSDVGVTIVTPGFIESELTQGKFL 239
           VLSS A+WL APRMS YNA+KAAL   FETLRVEL  D+G+TIVTPGF+ESELT+GK L
Sbjct: 181 VLSSTAAWLPAPRMSIYNATKAALKSMFETLRVELAPDIGITIVTPGFVESELTKGKAL 239

Source: Cucumis sativus

Species: Cucumis sativus

Genus: Cucumis

Family: Cucurbitaceae

Order: Cucurbitales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|449454959|ref|XP_004145221.1| PREDICTED: hydroxysteroid 11-beta-dehydrogenase 1-like protein-like [Cucumis sativus] gi|449470838|ref|XP_004153123.1| PREDICTED: hydroxysteroid 11-beta-dehydrogenase 1-like protein-like [Cucumis sativus]

 Score =  337 bits (864), Expect = 3e-90,   Method: Compositional matrix adjust.
 Identities = 158/239 (66%), Positives = 195/239 (81%)

Query: 1   MDLINKFLNLVAPPFTLFSLCLFLPPFLCYKFLLSVFNSIFSEDVSGKVVIITGASSGIG 60
           M+LI  FLNLV+PP T  SL  FLPP++  K+ L +   IF+EDV+GKVV+ITGASSGIG
Sbjct: 1   MELIKSFLNLVSPPITFVSLGFFLPPYVVLKYFLYLVRGIFTEDVAGKVVLITGASSGIG 60

Query: 61  EHLAYEYARRGACLALCARREKSLEEVADTAREIGSPDVITIRADVSKVDDCRSLVEETM 120
           EHLAY+YA+RGA LAL  RR+  L EVAD AR  GSPDVITI ADVSK+ D R ++ +T+
Sbjct: 61  EHLAYQYAQRGARLALVDRRKSPLHEVADIARYYGSPDVITIPADVSKLQDSRRIIYDTI 120

Query: 121 NHFGRLDHLVNNAGISSVALFEDIVNITDFKQIMNINFWGSVYTTRFAVPHLRYTKGKIV 180
           NHFGRLDHLVNNAG++++ LFE++ +IT F QIM+ N+WGSVYTT+FA+P+LR  +GKI+
Sbjct: 121 NHFGRLDHLVNNAGVANMTLFEEMKDITSFNQIMDTNYWGSVYTTQFAIPYLRNNRGKII 180

Query: 181 VLSSAASWLTAPRMSFYNASKAALVLFFETLRVELGSDVGVTIVTPGFIESELTQGKFL 239
           VLSS A+WL APRMS YNA+KAAL   FETLRVEL  D+G+TIVTPGF+ESELT+GK L
Sbjct: 181 VLSSTAAWLPAPRMSIYNATKAALKSMFETLRVELAPDIGITIVTPGFVESELTKGKAL 239

Source: Cucumis sativus

Species: Cucumis sativus

Genus: Cucumis

Family: Cucurbitaceae

Order: Cucurbitales

Phylum: Streptophyta

Superkingdom: Eukaryota

---

Prediction of Gene Ontology (GO) Terms

Close Homologs with Gene Ontology terms Detected by BLAST

Original result of BLAST against Gene Ontology (AMIGO)

ID	Length	Definition	Q cover	H cover	Identity	E-value
Query	248
TAIR|locus:2159747	349	HSD1 "hydroxysteroid dehydroge	0.971	0.690	0.585	2.5e-72
TAIR|locus:2832487	349	HSD1 "hydroxysteroid dehydroge	0.971	0.690	0.585	2.5e-72
TAIR|locus:2159737	299	HSD4 "hydroxysteroid dehydroge	0.979	0.812	0.485	6.8e-56
TAIR|locus:2832482	299	HSD7 "hydroxysteroid dehydroge	0.979	0.812	0.485	6.8e-56
TAIR|locus:2099510	321	HSD2 "hydroxysteroid dehydroge	0.822	0.635	0.534	2.3e-55
TAIR|locus:2163315	342	HSD6 "hydroxysteroid dehydroge	0.967	0.701	0.462	1.3e-54
TAIR|locus:2099515	309	HSD3 "hydroxysteroid dehydroge	0.943	0.757	0.452	9.2e-52
TAIR|locus:2140553	389	HSD5 "hydroxysteroid dehydroge	0.963	0.614	0.445	6.5e-51
TIGR_CMR|SO_0438	267	SO_0438 "oxidoreductase, short	0.766	0.711	0.369	1.1e-30
UNIPROTKB|E1BV75	336	DHRS7 "Uncharacterized protein	0.782	0.577	0.353	2.5e-26

TAIR|locus:2159747 HSD1 "hydroxysteroid dehydrogenase 1" [Arabidopsis thaliana (taxid:3702)]

 Score = 731 (262.4 bits), Expect = 2.5e-72, P = 2.5e-72
 Identities = 141/241 (58%), Positives = 181/241 (75%)

Query:     1 MDLINKFLNLVAXXXXXXXXXXXXXXXXXXXXXXSVFNSIFSEDVSGKVVIITGASSGIG 60
             M+LIN FLNL A                      S+F++IFSE++ GKVV+ITGASSGIG
Sbjct:     1 MELINDFLNLTAPFFTFFGLCFFLPPFYFFKFLQSIFSTIFSENLYGKVVLITGASSGIG 60

Query:    61 EHLAYEYXXXXXXXXXXXXXEKSLEEVADTAREIGSPDVITIRADVSKVDDCRSLVEETM 120
             E LAYEY             +  LEEVA+ ARE+GSP+V+T+ ADVSK DDCR +V++T+
Sbjct:    61 EQLAYEYACRGACLALTARRKNRLEEVAEIARELGSPNVVTVHADVSKPDDCRRIVDDTI 120

Query:   121 NHFGRLDHLVNNAGISSVALFEDIVNITDFKQIMNINFWGSVYTTRFAVPHLRYTKGKIV 180
              HFGRLDHLVNNAG++ +++FE+I +IT  K +++ NFWGSVYTTR A+P+LR + GKIV
Sbjct:   121 THFGRLDHLVNNAGMTQISMFENIEDITRTKAVLDTNFWGSVYTTRAALPYLRQSNGKIV 180

Query:   181 VLSSAASWLTAPRMSFYNASKAALVLFFETLRVELGSDVGVTIVTPGFIESELTQGKFLT 240
              +SS+A+WLTAPRMSFYNASKAAL+ FFET+R+ELG DV +TIVTPG+IESELTQGK+ +
Sbjct:   181 AMSSSAAWLTAPRMSFYNASKAALLSFFETMRIELGGDVHITIVTPGYIESELTQGKYFS 240

Query:   241 G 241
             G
Sbjct:   241 G 241

GO:0000166 "nucleotide binding" evidence=IEA

GO:0008152 "metabolic process" evidence=IEA

GO:0009507 "chloroplast" evidence=ISM

GO:0016491 "oxidoreductase activity" evidence=IEA;ISS

GO:0008202 "steroid metabolic process" evidence=IDA

GO:0070524 "11-beta-hydroxysteroid dehydrogenase (NADP+) activity" evidence=IDA

GO:0072555 "17-beta-ketosteroid reductase activity" evidence=IDA

GO:0072582 "17-beta-hydroxysteroid dehydrogenase (NADP+) activity" evidence=IDA

GO:0009737 "response to abscisic acid stimulus" evidence=IMP

GO:0009741 "response to brassinosteroid stimulus" evidence=IMP

TAIR|locus:2832487 HSD1 "hydroxysteroid dehydrogenase 1" [Arabidopsis thaliana (taxid:3702)]

 Score = 731 (262.4 bits), Expect = 2.5e-72, P = 2.5e-72
 Identities = 141/241 (58%), Positives = 181/241 (75%)

Query:     1 MDLINKFLNLVAXXXXXXXXXXXXXXXXXXXXXXSVFNSIFSEDVSGKVVIITGASSGIG 60
             M+LIN FLNL A                      S+F++IFSE++ GKVV+ITGASSGIG
Sbjct:     1 MELINDFLNLTAPFFTFFGLCFFLPPFYFFKFLQSIFSTIFSENLYGKVVLITGASSGIG 60

Query:    61 EHLAYEYXXXXXXXXXXXXXEKSLEEVADTAREIGSPDVITIRADVSKVDDCRSLVEETM 120
             E LAYEY             +  LEEVA+ ARE+GSP+V+T+ ADVSK DDCR +V++T+
Sbjct:    61 EQLAYEYACRGACLALTARRKNRLEEVAEIARELGSPNVVTVHADVSKPDDCRRIVDDTI 120

Query:   121 NHFGRLDHLVNNAGISSVALFEDIVNITDFKQIMNINFWGSVYTTRFAVPHLRYTKGKIV 180
              HFGRLDHLVNNAG++ +++FE+I +IT  K +++ NFWGSVYTTR A+P+LR + GKIV
Sbjct:   121 THFGRLDHLVNNAGMTQISMFENIEDITRTKAVLDTNFWGSVYTTRAALPYLRQSNGKIV 180

Query:   181 VLSSAASWLTAPRMSFYNASKAALVLFFETLRVELGSDVGVTIVTPGFIESELTQGKFLT 240
              +SS+A+WLTAPRMSFYNASKAAL+ FFET+R+ELG DV +TIVTPG+IESELTQGK+ +
Sbjct:   181 AMSSSAAWLTAPRMSFYNASKAALLSFFETMRIELGGDVHITIVTPGYIESELTQGKYFS 240

Query:   241 G 241
             G
Sbjct:   241 G 241

GO:0000166 "nucleotide binding" evidence=IEA

GO:0008152 "metabolic process" evidence=IEA

GO:0009507 "chloroplast" evidence=ISM

GO:0016491 "oxidoreductase activity" evidence=IEA;ISS

TAIR|locus:2159737 HSD4 "hydroxysteroid dehydrogenase 4" [Arabidopsis thaliana (taxid:3702)]

 Score = 576 (207.8 bits), Expect = 6.8e-56, P = 6.8e-56
 Identities = 118/243 (48%), Positives = 148/243 (60%)

Query:     1 MDLINKFLNLVAXXXXXXXXXXXXXXXXXXXXXXSVFNSIFSEDVSGKVVIITGASSGIG 60
             MDL NK  N++                        +     SE V+GKVVIITG+SSGIG
Sbjct:     1 MDLNNKIFNILLPIVTVSFLLVFMPFSIFFKLLQFIRGCKESEKVNGKVVIITGSSSGIG 60

Query:    61 EHLAYEYXXXXXXXXXXXXXEKSLEEVADTAREIGSPDVITIRADVSKVDDCRSLVEETM 120
             EHLAYEY             E  L+ VAD  R++GSPDV  +R DVS + DC+  V+ET+
Sbjct:    61 EHLAYEYARRGAYLTLVARREDRLQVVADRCRKLGSPDVAVVRGDVSVIKDCKRFVQETI 120

Query:   121 NHFGRLDHLVNNAGISSVALFEDIVNITDFKQIMNINFWGSVYTTRFAVPHLRYTKGKIV 180
             + FGRLDHLVNNAGI+    FED   I+D   I+N NFWG VY T FA+PHL+ TKGKI+
Sbjct:   121 SRFGRLDHLVNNAGIAEAKFFEDYSEISDVLPIVNTNFWGPVYATHFAIPHLKKTKGKII 180

Query:   181 VLSSAASWLTAPRMSFYNASKAALVLFFETLRVELGSDVGVTIVTPGFIESELTQGKFLT 240
              ++S A W   PRMS Y ASKAA++ F+ETLR+EL  +VGVTIV PG IE+  T    L 
Sbjct:   181 AVASPAGWSGVPRMSIYAASKAAMINFYETLRIELHPEVGVTIVFPGLIENGNTNPDLLA 240

Query:   241 GRR 243
              ++
Sbjct:   241 EKQ 243

GO:0000166 "nucleotide binding" evidence=IEA

GO:0005576 "extracellular region" evidence=ISM

GO:0008152 "metabolic process" evidence=IEA

GO:0016491 "oxidoreductase activity" evidence=IEA;ISS

TAIR|locus:2832482 HSD7 "hydroxysteroid dehydrogenase 7" [Arabidopsis thaliana (taxid:3702)]

 Score = 576 (207.8 bits), Expect = 6.8e-56, P = 6.8e-56
 Identities = 118/243 (48%), Positives = 148/243 (60%)

Query:     1 MDLINKFLNLVAXXXXXXXXXXXXXXXXXXXXXXSVFNSIFSEDVSGKVVIITGASSGIG 60
             MDL NK  N++                        +     SE V+GKVVIITG+SSGIG
Sbjct:     1 MDLNNKIFNILLPIVTVSFLLVFMPFSIFFKLLQFIRGCKESEKVNGKVVIITGSSSGIG 60

Query:    61 EHLAYEYXXXXXXXXXXXXXEKSLEEVADTAREIGSPDVITIRADVSKVDDCRSLVEETM 120
             EHLAYEY             E  L+ VAD  R++GSPDV  +R DVS + DC+  V+ET+
Sbjct:    61 EHLAYEYARRGAYLTLVARREDRLQVVADRCRKLGSPDVAVVRGDVSVIKDCKRFVQETI 120

Query:   121 NHFGRLDHLVNNAGISSVALFEDIVNITDFKQIMNINFWGSVYTTRFAVPHLRYTKGKIV 180
             + FGRLDHLVNNAGI+    FED   I+D   I+N NFWG VY T FA+PHL+ TKGKI+
Sbjct:   121 SRFGRLDHLVNNAGIAEAKFFEDYSEISDVLPIVNTNFWGPVYATHFAIPHLKKTKGKII 180

Query:   181 VLSSAASWLTAPRMSFYNASKAALVLFFETLRVELGSDVGVTIVTPGFIESELTQGKFLT 240
              ++S A W   PRMS Y ASKAA++ F+ETLR+EL  +VGVTIV PG IE+  T    L 
Sbjct:   181 AVASPAGWSGVPRMSIYAASKAAMINFYETLRIELHPEVGVTIVFPGLIENGNTNPDLLA 240

Query:   241 GRR 243
              ++
Sbjct:   241 EKQ 243

GO:0000166 "nucleotide binding" evidence=IEA

GO:0005576 "extracellular region" evidence=ISM

GO:0008152 "metabolic process" evidence=IEA

GO:0016491 "oxidoreductase activity" evidence=IEA;ISS

TAIR|locus:2099510 HSD2 "hydroxysteroid dehydrogenase 2" [Arabidopsis thaliana (taxid:3702)]

 Score = 571 (206.1 bits), Expect = 2.3e-55, P = 2.3e-55
 Identities = 109/204 (53%), Positives = 143/204 (70%)

Query:    35 SVFNSIFSEDVSGKVVIITGASSGIGEHLAYEYXXXXXXXXXXXXXEKSLEEVADTAREI 94
             S    +  E+V+GKVV+ITGASSGIGEH+AYEY             +  LE VA+T+R++
Sbjct:    34 SCLKHLHFENVTGKVVLITGASSGIGEHVAYEYAKKGAKLALVARRKDRLEIVAETSRQL 93

Query:    95 GSPDVITIRADVSKVDDCRSLVEETMNHFGRLDHLVNNAGISSVALFEDIVNITDFKQIM 154
             GS DVI I  DVS V+DC+  ++ET++HFG+LDHL+NNAG+    +FED   I D   IM
Sbjct:    94 GSGDVIIIPGDVSNVEDCKKFIDETIHHFGKLDHLINNAGVPQTVIFEDFTQIQDANSIM 153

Query:   155 NINFWGSVYTTRFAVPHLRYTKGKIVVLSSAASWLTAPRMSFYNASKAALVLFFETLRVE 214
             +INFWGS Y T FA+PHLR +KGKIVV+SSA + +     S Y+ASKAALV FFETLRVE
Sbjct:   154 DINFWGSTYITYFAIPHLRKSKGKIVVISSATAIIPLQAASVYSASKAALVKFFETLRVE 213

Query:   215 LGSDVGVTIVTPGFIESELTQGKF 238
             +  D+ +TI  PGFI +++T  +F
Sbjct:   214 ISPDIKITIALPGFISTDMTTPQF 237

GO:0000166 "nucleotide binding" evidence=IEA

GO:0008152 "metabolic process" evidence=IEA

GO:0009507 "chloroplast" evidence=ISM

GO:0016491 "oxidoreductase activity" evidence=IEA;ISS

TAIR|locus:2163315 HSD6 "hydroxysteroid dehydrogenase 6" [Arabidopsis thaliana (taxid:3702)]

 Score = 564 (203.6 bits), Expect = 1.3e-54, P = 1.3e-54
 Identities = 111/240 (46%), Positives = 154/240 (64%)

Query:     1 MDLINKFLNLVAXXXXXXXXXXXXXXXXXXXXXXSVFNSIFSEDVSGKVVIITGASSGIG 60
             MD INK +N +                       S+  ++FSE+V+GKVV+ITGA+SGIG
Sbjct:     1 MDSINKIINFLFPLLTLYALLVFYPTYQRLKSAVSICRNLFSENVAGKVVVITGAASGIG 60

Query:    61 EHLAYEYXXXXXXXXXXXXXEKSLEEVADTAREIGSPDVITIRADVSKVDDCRSLVEETM 120
             E LAYEY              + L  VA  A   GSP+V+ + ADVSK+ DC   +  T+
Sbjct:    61 EALAYEYGKRGAYLALVDIRGEPLFHVAALAELYGSPEVLPLVADVSKLQDCERFIRATV 120

Query:   121 NHFGRLDHLVNNAGISSVALFEDIVNITDFKQIMNINFWGSVYTTRFAVPHLRYTKGKIV 180
              HFGRLDHLV NAG++ +  F DI +++     M+INFWGSVY T FA P+L+  +G+IV
Sbjct:   121 LHFGRLDHLVTNAGVAPLYFFADIEDVSKASPAMDINFWGSVYCTFFASPYLKKFRGRIV 180

Query:   181 VLSSAASWLTAPRMSFYNASKAALVLFFETLRVELGSDVGVTIVTPGFIESELTQGKFLT 240
             V++S   ++ +PR+SFY ASKAA++ F+ETLR E GSD+GVTIV PG ++SE+++GKF+T
Sbjct:   181 VIASGCGYIASPRLSFYCASKAAVIAFYETLRTEFGSDIGVTIVAPGIVDSEMSRGKFMT 240

GO:0000166 "nucleotide binding" evidence=IEA

GO:0005576 "extracellular region" evidence=ISM

GO:0008152 "metabolic process" evidence=IEA

GO:0016491 "oxidoreductase activity" evidence=IEA;ISS

TAIR|locus:2099515 HSD3 "hydroxysteroid dehydrogenase 3" [Arabidopsis thaliana (taxid:3702)]

 Score = 537 (194.1 bits), Expect = 9.2e-52, P = 9.2e-52
 Identities = 106/234 (45%), Positives = 146/234 (62%)

Query:     1 MDLINKFLNLVAXXXXXXXXXXXXXXXXXXXXXXSVFNSIFSEDVSGKVVIITGASSGIG 60
             MD++   LNL+                        +  ++  E+V+ KVV+ITGASSGIG
Sbjct:     1 MDILTTILNLLLPPLTIIFLFLFYPFYLLIKLVLCLRKNLHFENVARKVVLITGASSGIG 60

Query:    61 EHLAYEYXXXXXXXXXXXXXEKSLEEVADTAREIGSPDVITIRADVSKVDDCRSLVEETM 120
             EH+AYEY                LE VA+T+R++GS +VI I  DVS V+DC+  ++ET+
Sbjct:    61 EHVAYEYAKKGAYLALVARRRDRLEIVAETSRQLGSGNVIIIPGDVSNVEDCKKFIDETI 120

Query:   121 NHFGRLDHLVNNAGISSVALFEDIVNITDFKQIMNINFWGSVYTTRFAVPHLRYTKGKIV 180
              HFG+LDHL+NNAG+    LFED   I D   IM+INFWG+ Y T FA+PHLR +KGKIV
Sbjct:   121 RHFGKLDHLINNAGVFQTVLFEDFTQIQDANPIMDINFWGTTYITYFAIPHLRKSKGKIV 180

Query:   181 VLSSAASWLTAPRMSFYNASKAALVLFFETLRVELGSDVGVTIVTPGFIESELT 234
              ++S ++ +  P  S Y ASKAAL+ FFETLR+EL  D+ +TIV PG + +++T
Sbjct:   181 AITSGSANIPLPLASIYAASKAALLRFFETLRIELSPDIKITIVLPGVVSTDMT 234

GO:0000166 "nucleotide binding" evidence=IEA

GO:0008152 "metabolic process" evidence=IEA

GO:0009507 "chloroplast" evidence=ISM

GO:0016491 "oxidoreductase activity" evidence=IEA;ISS

TAIR|locus:2140553 HSD5 "hydroxysteroid dehydrogenase 5" [Arabidopsis thaliana (taxid:3702)]

 Score = 529 (191.3 bits), Expect = 6.5e-51, P = 6.5e-51
 Identities = 107/240 (44%), Positives = 149/240 (62%)

Query:     1 MDLINKFLNLVAXXXXXXXXXXXXXXXXXXXXXXSVFNSIFS-EDVSGKVVIITGASSGI 59
             +DL+N  +NLVA                        +NS F+ E++  KVV+ITGASS I
Sbjct:     2 VDLLNSVMNLVAPPATMVVMAFAWPLLSFISFSERAYNSYFATENMEDKVVVITGASSAI 61

Query:    60 GEHLAYEYXXXXXXXXXXXXXEKSLEEVADTAREIGSPDVITIRADVSKVDDCRSLVEET 119
             GE +AYEY             E+ L  V++ A++IG+  VI I ADV K DDCR  + + 
Sbjct:    62 GEQIAYEYAKRGANLVLVARREQRLRVVSNKAKQIGANHVIIIAADVIKEDDCRRFITQA 121

Query:   120 MNHFGRLDHLVNNAGISSVALFEDIVNITDFKQIMNINFWGSVYTTRFAVPHLRYTKGKI 179
             +N++GR+DHLVN A +     FE++ + T F  +++INFWG+VY T  A+P+L  T G+I
Sbjct:   122 VNYYGRVDHLVNTASLGHTFYFEEVSDTTVFPHLLDINFWGNVYPTYVALPYLHQTNGRI 181

Query:   180 VVLSSAASWLTAPRMSFYNASKAALVLFFETLRVELGSDVGVTIVTPGFIESELTQGKFL 239
             VV +S  +WL  PRMS Y+A+KAALV F+ETLR EL  DVG+TI T G+I SE++ GKF+
Sbjct:   182 VVNASVENWLPLPRMSLYSAAKAALVNFYETLRFELNGDVGITIATHGWIGSEMSGGKFM 241

GO:0000166 "nucleotide binding" evidence=IEA

GO:0005576 "extracellular region" evidence=ISM

GO:0008152 "metabolic process" evidence=IEA

GO:0016491 "oxidoreductase activity" evidence=IEA;ISS

GO:0016114 "terpenoid biosynthetic process" evidence=RCA

TIGR_CMR|SO_0438 SO_0438 "oxidoreductase, short chain dehydrogenase/reductase family" [Shewanella oneidensis MR-1 (taxid:211586)]

 Score = 338 (124.0 bits), Expect = 1.1e-30, P = 1.1e-30
 Identities = 71/192 (36%), Positives = 110/192 (57%)

Query:    43 EDVSGKVVIITGASSGIGEHLAYEYXXXXXXXXXXXXXEKSLEEVADTAREIGSPDVITI 102
             + ++GKVVIITGAS GIG  LA                E  L  +A      G P     
Sbjct:     2 DGLTGKVVIITGASEGIGRALAIAMARIGCQLVLSARNETRLASLALEVANYG-PTPFVF 60

Query:   103 RADVSKVDDCRSLVEETMNHFGRLDHLVNNAGISSVALFEDIVNITDFKQIMNINFWGSV 162
              ADVS    C  L+  T+ H+GR+D LVNNAG++  + F+++  ++  + IM +N+ G  
Sbjct:    61 AADVSSASQCEDLIHATIAHYGRIDILVNNAGMTMWSRFDELTQLSVLEDIMRVNYLGPA 120

Query:   163 YTTRFAVPHLRYTKGKIVVLSSAASWLTAPRMSFYNASKAALVLFFETLRVELGSD-VGV 221
             Y T  A+P+L+ ++G++V+++S A     P  S Y ASK A++ FF++LR+EL  D V V
Sbjct:   121 YLTHAALPYLKSSQGQVVIVASVAGLTGVPTRSGYAASKHAVIGFFDSLRIELADDNVAV 180

Query:   222 TIVTPGFIESEL 233
             T++ P F+ S++
Sbjct:   181 TVICPDFVVSQI 192

GO:0008152 "metabolic process" evidence=ISS

GO:0016491 "oxidoreductase activity" evidence=ISS

UNIPROTKB|E1BV75 DHRS7 "Uncharacterized protein" [Gallus gallus (taxid:9031)]

 Score = 297 (109.6 bits), Expect = 2.5e-26, P = 2.5e-26
 Identities = 71/201 (35%), Positives = 107/201 (53%)

Query:    44 DVSGKVVIITGASSGIGEHLAYEYXXXXXXXXXXXXXEKSLEEVADTAREIGS---PDVI 100
             ++ GKVV +TGASSGIGE LAY+              E  LE V     +I +    D++
Sbjct:    48 ELRGKVVWVTGASSGIGEELAYQLSKIGALLAISARREDELERVKKKCLQISNLSDKDIL 107

Query:   101 TIRADVSKVDDCRSLVEETMNHFGRLDHLVNNAGISSVALFEDIVNITDFKQIMNINFWG 160
              +R D++      +     + HFG++D LVNN G S  +LF D  N+  F  IM +N+ G
Sbjct:   108 VLRLDLTDRSSHEAATNSVLKHFGKIDVLVNNGGRSQRSLFVD-TNLDVFSAIMELNYLG 166

Query:   161 SVYTTRFAVPHL-RYTKGKIVVLSSAASWLTAPRMSFYNASKAALVLFFETLRVELGS-- 217
             ++  T+  + H+    +GKIV +SS    + AP  S Y ASK AL  FF +LR EL    
Sbjct:   167 TISLTKHVLNHMIERRRGKIVTVSSVMGIMGAPLASGYCASKHALQGFFNSLRTELTDYP 226

Query:   218 DVGVTIVTPGFIESELTQGKF 238
             ++ +  + PG ++S++ Q  F
Sbjct:   227 EISIINICPGPVQSKIIQNVF 247

GO:0000166 "nucleotide binding" evidence=IEA

GO:0016491 "oxidoreductase activity" evidence=IEA

---

Prediction of Enzyme Commission (EC) Number

EC Number Prediction by Annotation Transfer from SWISS-PROT Entries

Original result of BLAST against SWISS-PROT

No confident hit for EC number transfering in SWISSPROT detected by BLAST

EC Number Prediction by Ezypred Server

Original result from Ezypred Server

Fail to connect to Ezypred Server

EC Number Prediction by EFICAz Software

Prediction Level	EC number	Confidence of Prediction
3rd Layer	1.1.1	LOW CONFIDENCE prediction!
4th Layer	1.1.1.14	LOW CONFIDENCE prediction!

---

Prediction of Functionally Associated Proteins

Functionally Associated Proteins Detected by STRING

Original result from the STRING server

Fail to connect to STRING server

---

Conserved Domains and Related Protein Families

Conserved Domains Detected by RPS-BLAST

Original result of RPS-BLAST against CDD database part I

ID	Length	Definition	E-value
Query	248
cd05332	257	cd05332, 11beta-HSD1_like_SDR_c, 11beta-hydroxyste	2e-74
PRK06181	263	PRK06181, PRK06181, short chain dehydrogenase; Pro	1e-65
cd05233	234	cd05233, SDR_c, classical (c) SDRs	2e-59
COG1028	251	COG1028, FabG, Dehydrogenases with different speci	6e-51
cd05360	233	cd05360, SDR_c3, classical (c) SDR, subgroup 3	5e-50
cd05374	248	cd05374, 17beta-HSD-like_SDR_c, 17beta hydroxyster	1e-49
PRK07231	251	PRK07231, fabG, 3-ketoacyl-(acyl-carrier-protein)	1e-49
cd05364	253	cd05364, SDR_c11, classical (c) SDR, subgroup 11	1e-46
PRK07109	334	PRK07109, PRK07109, short chain dehydrogenase; Pro	3e-45
PRK05653	246	PRK05653, fabG, 3-ketoacyl-(acyl-carrier-protein)	6e-44
PRK05565	247	PRK05565, fabG, 3-ketoacyl-(acyl-carrier-protein)	8e-42
COG0300	265	COG0300, DltE, Short-chain dehydrogenases of vario	2e-41
cd08939	239	cd08939, KDSR-like_SDR_c, 3-ketodihydrosphingosine	4e-41
PRK05557	248	PRK05557, fabG, 3-ketoacyl-(acyl-carrier-protein)	1e-40
COG4221	246	COG4221, COG4221, Short-chain alcohol dehydrogenas	1e-40
PRK05872	296	PRK05872, PRK05872, short chain dehydrogenase; Pro	2e-40
cd05339	243	cd05339, 17beta-HSDXI-like_SDR_c, human 17-beta-hy	1e-39
cd08934	243	cd08934, CAD_SDR_c, clavulanic acid dehydrogenase	1e-39
PRK12826	251	PRK12826, PRK12826, 3-ketoacyl-(acyl-carrier-prote	8e-39
PRK12829	264	PRK12829, PRK12829, short chain dehydrogenase; Pro	9e-39
PRK12939	250	PRK12939, PRK12939, short chain dehydrogenase; Pro	8e-38
PRK05650	270	PRK05650, PRK05650, short chain dehydrogenase; Pro	4e-37
cd05350	239	cd05350, SDR_c6, classical (c) SDR, subgroup 6	6e-37
cd05362	243	cd05362, THN_reductase-like_SDR_c, tetrahydroxynap	2e-36
PRK07201	657	PRK07201, PRK07201, short chain dehydrogenase; Pro	2e-36
cd05323	244	cd05323, ADH_SDR_c_like, insect type alcohol dehyd	6e-36
cd05333	240	cd05333, BKR_SDR_c, beta-Keto acyl carrier protein	7e-36
PRK12429	258	PRK12429, PRK12429, 3-hydroxybutyrate dehydrogenas	2e-35
PRK07024	257	PRK07024, PRK07024, short chain dehydrogenase; Pro	2e-35
PRK07326	237	PRK07326, PRK07326, short chain dehydrogenase; Pro	5e-35
TIGR01830	239	TIGR01830, 3oxo_ACP_reduc, 3-oxoacyl-(acyl-carrier	7e-35
cd05369	249	cd05369, TER_DECR_SDR_a, Trans-2-enoyl-CoA reducta	2e-34
PRK12825	249	PRK12825, fabG, 3-ketoacyl-(acyl-carrier-protein)	4e-34
TIGR01963	255	TIGR01963, PHB_DH, 3-hydroxybutyrate dehydrogenase	6e-34
PRK05855	582	PRK05855, PRK05855, short chain dehydrogenase; Val	9e-34
PRK12828	239	PRK12828, PRK12828, short chain dehydrogenase; Pro	9e-34
PRK12935	247	PRK12935, PRK12935, acetoacetyl-CoA reductase; Pro	1e-33
cd05344	253	cd05344, BKR_like_SDR_like, putative beta-ketoacyl	4e-33
PRK07890	258	PRK07890, PRK07890, short chain dehydrogenase; Pro	6e-33
cd05341	247	cd05341, 3beta-17beta-HSD_like_SDR_c, 3beta17beta	9e-33
PRK06841	255	PRK06841, PRK06841, short chain dehydrogenase; Pro	1e-32
PRK06139	330	PRK06139, PRK06139, short chain dehydrogenase; Pro	1e-32
PRK07666	239	PRK07666, fabG, 3-ketoacyl-(acyl-carrier-protein)	1e-32
PRK06172	253	PRK06172, PRK06172, short chain dehydrogenase; Pro	2e-32
pfam00106	167	pfam00106, adh_short, short chain dehydrogenase	5e-32
cd05359	242	cd05359, ChcA_like_SDR_c, 1-cyclohexenylcarbonyl_c	8e-32
PRK06138	252	PRK06138, PRK06138, short chain dehydrogenase; Pro	7e-31
PRK08213	259	PRK08213, PRK08213, gluconate 5-dehydrogenase; Pro	9e-31
PRK06463	255	PRK06463, fabG, 3-ketoacyl-(acyl-carrier-protein)	9e-31
cd05338	246	cd05338, DHRS1_HSDL2-like_SDR_c, human dehydrogena	9e-31
PRK06198	260	PRK06198, PRK06198, short chain dehydrogenase; Pro	1e-30
cd05355	270	cd05355, SDR_c1, classical (c) SDR, subgroup 1	2e-30
cd05347	248	cd05347, Ga5DH-like_SDR_c, gluconate 5-dehydrogena	3e-30
cd08933	261	cd08933, RDH_SDR_c, retinal dehydrogenase-like, cl	3e-30
cd05358	253	cd05358, GlcDH_SDR_c, glucose 1 dehydrogenase (Glc	4e-30
cd08932	223	cd08932, HetN_like_SDR_c, HetN oxidoreductase-like	4e-30
PRK07825	273	PRK07825, PRK07825, short chain dehydrogenase; Pro	5e-30
cd08944	246	cd08944, SDR_c12, classical (c) SDR, subgroup 12	7e-30
PRK06194	287	PRK06194, PRK06194, hypothetical protein; Provisio	8e-30
PRK08936	261	PRK08936, PRK08936, glucose-1-dehydrogenase; Provi	4e-29
PRK08264	238	PRK08264, PRK08264, short chain dehydrogenase; Val	6e-29
PRK06077	252	PRK06077, fabG, 3-ketoacyl-(acyl-carrier-protein)	9e-29
TIGR04316	250	TIGR04316, dhbA_paeA, 2,3-dihydro-2,3-dihydroxyben	1e-28
cd05346	249	cd05346, SDR_c5, classical (c) SDR, subgroup 5	2e-28
PRK13394	262	PRK13394, PRK13394, 3-hydroxybutyrate dehydrogenas	2e-28
PRK05866	293	PRK05866, PRK05866, short chain dehydrogenase; Pro	2e-28
PRK07774	250	PRK07774, PRK07774, short chain dehydrogenase; Pro	3e-28
cd05329	251	cd05329, TR_SDR_c, tropinone reductase-I and II (T	4e-28
cd05356	239	cd05356, 17beta-HSD1_like_SDR_c, 17-beta-hydroxyst	4e-28
cd09805	281	cd09805, type2_17beta_HSD-like_SDR_c, human 17beta	7e-28
PRK08324	681	PRK08324, PRK08324, short chain dehydrogenase; Val	7e-28
cd05370	228	cd05370, SDR_c2, classical (c) SDR, subgroup 2	1e-27
cd05326	249	cd05326, secoisolariciresinol-DH_like_SDR_c, secoi	1e-27
cd05352	252	cd05352, MDH-like_SDR_c, mannitol dehydrogenase (M	1e-27
PRK08267	260	PRK08267, PRK08267, short chain dehydrogenase; Pro	3e-27
PRK08263	275	PRK08263, PRK08263, short chain dehydrogenase; Pro	5e-27
PRK08226	263	PRK08226, PRK08226, short chain dehydrogenase; Pro	5e-27
PRK06200	263	PRK06200, PRK06200, 2,3-dihydroxy-2,3-dihydropheny	6e-27
PRK08251	248	PRK08251, PRK08251, short chain dehydrogenase; Pro	6e-27
PRK06500	249	PRK06500, PRK06500, short chain dehydrogenase; Pro	7e-27
cd05343	250	cd05343, Mgc4172-like_SDR_c, human Mgc4172-like, c	8e-27
PRK06701	290	PRK06701, PRK06701, short chain dehydrogenase; Pro	1e-26
PRK06179	270	PRK06179, PRK06179, short chain dehydrogenase; Pro	2e-26
cd05345	248	cd05345, BKR_3_SDR_c, putative beta-ketoacyl acyl	2e-26
PRK05867	253	PRK05867, PRK05867, short chain dehydrogenase; Pro	2e-26
PRK07677	252	PRK07677, PRK07677, short chain dehydrogenase; Pro	4e-26
cd08943	250	cd08943, R1PA_ADH_SDR_c, rhamnulose-1-phosphate al	6e-26
cd05327	269	cd05327, retinol-DH_like_SDR_c_like, retinol dehyd	8e-26
PRK06182	273	PRK06182, PRK06182, short chain dehydrogenase; Val	2e-25
PRK06914	280	PRK06914, PRK06914, short chain dehydrogenase; Pro	2e-25
PRK12745	256	PRK12745, PRK12745, 3-ketoacyl-(acyl-carrier-prote	3e-25
PRK07478	254	PRK07478, PRK07478, short chain dehydrogenase; Pro	3e-25
cd08940	258	cd08940, HBDH_SDR_c, d-3-hydroxybutyrate dehydroge	7e-25
cd08929	226	cd08929, SDR_c4, classical (c) SDR, subgroup 4	8e-25
PRK12937	245	PRK12937, PRK12937, short chain dehydrogenase; Pro	8e-25
cd05366	257	cd05366, meso-BDH-like_SDR_c, meso-2,3-butanediol	1e-24
cd05348	257	cd05348, BphB-like_SDR_c, cis-biphenyl-2,3-dihydro	1e-24
PRK09072	263	PRK09072, PRK09072, short chain dehydrogenase; Pro	1e-24
PRK07063	260	PRK07063, PRK07063, short chain dehydrogenase; Pro	1e-24
PRK08220	252	PRK08220, PRK08220, 2,3-dihydroxybenzoate-2,3-dehy	2e-24
cd05330	257	cd05330, cyclohexanol_reductase_SDR_c, cyclohexano	2e-24
PRK07067	257	PRK07067, PRK07067, sorbitol dehydrogenase; Provis	2e-24
cd05354	235	cd05354, SDR_c7, classical (c) SDR, subgroup 7	3e-24
PRK06484	520	PRK06484, PRK06484, short chain dehydrogenase; Val	3e-24
cd08931	227	cd08931, SDR_c9, classical (c) SDR, subgroup 9	7e-24
PRK07832	272	PRK07832, PRK07832, short chain dehydrogenase; Pro	1e-23
PRK07454	241	PRK07454, PRK07454, short chain dehydrogenase; Pro	1e-23
cd09761	242	cd09761, A3DFK9-like_SDR_c, Clostridium thermocell	1e-23
PRK12827	249	PRK12827, PRK12827, short chain dehydrogenase; Pro	2e-23
PRK08217	253	PRK08217, fabG, 3-ketoacyl-(acyl-carrier-protein)	2e-23
PRK08628	258	PRK08628, PRK08628, short chain dehydrogenase; Pro	3e-23
PRK06180	277	PRK06180, PRK06180, short chain dehydrogenase; Pro	5e-23
PRK09242	257	PRK09242, PRK09242, tropinone reductase; Provision	6e-23
cd05337	255	cd05337, BKR_1_SDR_c, putative beta-ketoacyl acyl	6e-23
TIGR03971	265	TIGR03971, SDR_subfam_1, oxidoreductase, SDR famil	7e-23
PRK08219	227	PRK08219, PRK08219, short chain dehydrogenase; Pro	8e-23
cd05367	241	cd05367, SPR-like_SDR_c, sepiapterin reductase (SP	8e-23
TIGR02415	254	TIGR02415, 23BDH, acetoin reductases	9e-23
PRK06949	258	PRK06949, PRK06949, short chain dehydrogenase; Pro	1e-22
PRK07062	265	PRK07062, PRK07062, short chain dehydrogenase; Pro	1e-22
PRK07775	274	PRK07775, PRK07775, short chain dehydrogenase; Pro	2e-22
PRK08277	278	PRK08277, PRK08277, D-mannonate oxidoreductase; Pr	2e-22
PRK06398	258	PRK06398, PRK06398, aldose dehydrogenase; Validate	2e-22
PRK06171	266	PRK06171, PRK06171, sorbitol-6-phosphate 2-dehydro	2e-22
PRK12936	245	PRK12936, PRK12936, 3-ketoacyl-(acyl-carrier-prote	3e-22
PRK08643	256	PRK08643, PRK08643, acetoin reductase; Validated	5e-22
PRK06523	260	PRK06523, PRK06523, short chain dehydrogenase; Pro	6e-22
PRK06484	520	PRK06484, PRK06484, short chain dehydrogenase; Val	1e-21
PRK06101	240	PRK06101, PRK06101, short chain dehydrogenase; Pro	1e-21
PRK07814	263	PRK07814, PRK07814, short chain dehydrogenase; Pro	2e-21
PRK07856	252	PRK07856, PRK07856, short chain dehydrogenase; Pro	2e-21
PRK06947	248	PRK06947, PRK06947, glucose-1-dehydrogenase; Provi	3e-21
cd05365	242	cd05365, 7_alpha_HSDH_SDR_c, 7 alpha-hydroxysteroi	3e-21
COG3967	245	COG3967, DltE, Short-chain dehydrogenase involved	4e-21
PRK08063	250	PRK08063, PRK08063, enoyl-(acyl carrier protein) r	7e-21
PRK06482	276	PRK06482, PRK06482, short chain dehydrogenase; Pro	8e-21
cd05357	234	cd05357, PR_SDR_c, pteridine reductase (PR), class	1e-20
cd05324	225	cd05324, carb_red_PTCR-like_SDR_c, Porcine testicu	1e-20
cd05331	244	cd05331, DH-DHB-DH_SDR_c, 2,3 dihydro-2,3 dihydroz	1e-20
cd05340	236	cd05340, Ycik_SDR_c, Escherichia coli K-12 YCIK-li	1e-20
cd08936	256	cd08936, CR_SDR_c, Porcine peroxisomal carbonyl re	2e-20
PRK08589	272	PRK08589, PRK08589, short chain dehydrogenase; Val	2e-20
cd05349	246	cd05349, BKR_2_SDR_c, putative beta-ketoacyl acyl	2e-20
TIGR01832	248	TIGR01832, kduD, 2-deoxy-D-gluconate 3-dehydrogena	3e-20
cd05353	250	cd05353, hydroxyacyl-CoA-like_DH_SDR_c-like, (3R)-	4e-20
cd05325	233	cd05325, carb_red_sniffer_like_SDR_c, carbonyl red	4e-20
PRK08265	261	PRK08265, PRK08265, short chain dehydrogenase; Pro	4e-20
PRK07069	251	PRK07069, PRK07069, short chain dehydrogenase; Val	5e-20
cd08942	250	cd08942, RhlG_SDR_c, RhlG and related beta-ketoacy	6e-20
PRK07060	245	PRK07060, PRK07060, short chain dehydrogenase; Pro	9e-20
PRK05876	275	PRK05876, PRK05876, short chain dehydrogenase; Pro	9e-20
cd09763	265	cd09763, DHRS1-like_SDR_c, human dehydrogenase/red	1e-19
PRK09135	249	PRK09135, PRK09135, pteridine reductase; Provision	1e-19
PRK12743	256	PRK12743, PRK12743, oxidoreductase; Provisional	1e-19
PRK05693	274	PRK05693, PRK05693, short chain dehydrogenase; Pro	3e-19
PRK06113	255	PRK06113, PRK06113, 7-alpha-hydroxysteroid dehydro	3e-19
cd08935	271	cd08935, mannonate_red_SDR_c, putative D-mannonate	3e-19
PRK06123	248	PRK06123, PRK06123, short chain dehydrogenase; Pro	4e-19
PRK05786	238	PRK05786, fabG, 3-ketoacyl-(acyl-carrier-protein)	5e-19
PLN02253	280	PLN02253, PLN02253, xanthoxin dehydrogenase	7e-19
PRK06114	254	PRK06114, PRK06114, short chain dehydrogenase; Pro	7e-19
cd05363	254	cd05363, SDH_SDR_c, Sorbitol dehydrogenase (SDH),	7e-19
TIGR03325	262	TIGR03325, BphB_TodD, cis-2,3-dihydrobiphenyl-2,3-	8e-19
cd05351	244	cd05351, XR_like_SDR_c, xylulose reductase-like, c	9e-19
cd05371	252	cd05371, HSD10-like_SDR_c, 17hydroxysteroid dehydr	1e-18
cd08937	256	cd08937, DHB_DH-like_SDR_c, 1,6-dihydroxycyclohexa	2e-18
PRK06128	300	PRK06128, PRK06128, oxidoreductase; Provisional	3e-18
cd05368	241	cd05368, DHRS6_like_SDR_c, human DHRS6-like, class	6e-18
cd09807	274	cd09807, retinol-DH_like_SDR_c, retinol dehydrogen	8e-18
PRK08945	247	PRK08945, PRK08945, putative oxoacyl-(acyl carrier	9e-18
PRK12746	254	PRK12746, PRK12746, short chain dehydrogenase; Pro	1e-17
PRK07831	262	PRK07831, PRK07831, short chain dehydrogenase; Pro	1e-17
cd08945	258	cd08945, PKR_SDR_c, Polyketide ketoreductase, clas	1e-17
PRK08993	253	PRK08993, PRK08993, 2-deoxy-D-gluconate 3-dehydrog	1e-17
PRK07035	252	PRK07035, PRK07035, short chain dehydrogenase; Pro	5e-17
PRK12384	259	PRK12384, PRK12384, sorbitol-6-phosphate dehydroge	6e-17
PRK07576	264	PRK07576, PRK07576, short chain dehydrogenase; Pro	8e-17
PRK07985	294	PRK07985, PRK07985, oxidoreductase; Provisional	1e-16
PRK12481	251	PRK12481, PRK12481, 2-deoxy-D-gluconate 3-dehydrog	1e-16
PRK12823	260	PRK12823, benD, 1,6-dihydroxycyclohexa-2,4-diene-1	2e-16
PRK05717	255	PRK05717, PRK05717, oxidoreductase; Validated	3e-16
PRK09730	247	PRK09730, PRK09730, putative NAD(P)-binding oxidor	3e-16
TIGR02632	676	TIGR02632, RhaD_aldol-ADH, rhamnulose-1-phosphate	3e-16
PRK08278	273	PRK08278, PRK08278, short chain dehydrogenase; Pro	4e-16
PRK08261	450	PRK08261, fabG, 3-ketoacyl-(acyl-carrier-protein)	4e-16
PRK06935	258	PRK06935, PRK06935, 2-deoxy-D-gluconate 3-dehydrog	5e-16
PRK05993	277	PRK05993, PRK05993, short chain dehydrogenase; Pro	7e-16
PRK12747	252	PRK12747, PRK12747, short chain dehydrogenase; Pro	2e-15
PRK08642	253	PRK08642, fabG, 3-ketoacyl-(acyl-carrier-protein)	4e-15
PRK08339	263	PRK08339, PRK08339, short chain dehydrogenase; Pro	4e-15
cd05373	238	cd05373, SDR_c10, classical (c) SDR, subgroup 10	5e-15
TIGR03206	250	TIGR03206, benzo_BadH, 2-hydroxycyclohexanecarboxy	6e-15
PRK08085	254	PRK08085, PRK08085, gluconate 5-dehydrogenase; Pro	7e-15
PRK07041	230	PRK07041, PRK07041, short chain dehydrogenase; Pro	8e-15
cd09806	258	cd09806, type1_17beta-HSD-like_SDR_c, human estrog	9e-15
cd11730	206	cd11730, Tthb094_like_SDR_c, Tthb094 and related p	1e-14
PRK06125	259	PRK06125, PRK06125, short chain dehydrogenase; Pro	1e-14
PRK07097	265	PRK07097, PRK07097, gluconate 5-dehydrogenase; Pro	5e-14
PRK07523	255	PRK07523, PRK07523, gluconate 5-dehydrogenase; Pro	7e-14
PRK10538	248	PRK10538, PRK10538, malonic semialdehyde reductase	9e-14
PRK07792	306	PRK07792, fabG, 3-ketoacyl-(acyl-carrier-protein)	1e-13
PRK06124	256	PRK06124, PRK06124, gluconate 5-dehydrogenase; Pro	2e-13
PRK05875	276	PRK05875, PRK05875, short chain dehydrogenase; Pro	2e-13
TIGR01829	242	TIGR01829, AcAcCoA_reduct, acetoacetyl-CoA reducta	2e-13
PRK08017	256	PRK08017, PRK08017, oxidoreductase; Provisional	2e-13
PRK05599	246	PRK05599, PRK05599, hypothetical protein; Provisio	3e-13
PRK08340	259	PRK08340, PRK08340, glucose-1-dehydrogenase; Provi	4e-13
PRK12824	245	PRK12824, PRK12824, acetoacetyl-CoA reductase; Pro	7e-13
cd08930	250	cd08930, SDR_c8, classical (c) SDR, subgroup 8	8e-13
PLN02780	320	PLN02780, PLN02780, ketoreductase/ oxidoreductase	1e-12
PRK06057	255	PRK06057, PRK06057, short chain dehydrogenase; Pro	1e-12
smart00822	180	smart00822, PKS_KR, This enzymatic domain is part	1e-12
PRK07791	286	PRK07791, PRK07791, short chain dehydrogenase; Pro	2e-12
PRK08703	239	PRK08703, PRK08703, short chain dehydrogenase; Pro	2e-12
pfam08659	181	pfam08659, KR, KR domain	5e-12
cd09762	243	cd09762, HSDL2_SDR_c, human hydroxysteroid dehydro	6e-12
PRK07102	243	PRK07102, PRK07102, short chain dehydrogenase; Pro	8e-12
PRK07577	234	PRK07577, PRK07577, short chain dehydrogenase; Pro	2e-11
PRK07806	248	PRK07806, PRK07806, short chain dehydrogenase; Pro	2e-11
PRK06197	306	PRK06197, PRK06197, short chain dehydrogenase; Pro	3e-11
cd05334	221	cd05334, DHPR_SDR_c_like, dihydropteridine reducta	4e-11
PRK09291	257	PRK09291, PRK09291, short chain dehydrogenase; Pro	5e-11
PRK06550	235	PRK06550, fabG, 3-ketoacyl-(acyl-carrier-protein)	7e-11
TIGR01831	239	TIGR01831, fabG_rel, 3-oxoacyl-(acyl-carrier-prote	8e-11
PRK07074	257	PRK07074, PRK07074, short chain dehydrogenase; Pro	1e-10
cd11731	198	cd11731, Lin1944_like_SDR_c, Lin1944 and related p	1e-10
pfam13561	239	pfam13561, adh_short_C2, Enoyl-(Acyl carrier prote	4e-10
cd05322	257	cd05322, SDH_SDR_c_like, Sorbitol 6-phosphate dehy	5e-10
PRK12748	256	PRK12748, PRK12748, 3-ketoacyl-(acyl-carrier-prote	9e-10
PRK06924	251	PRK06924, PRK06924, short chain dehydrogenase; Pro	1e-09
PRK09134	258	PRK09134, PRK09134, short chain dehydrogenase; Pro	2e-09
TIGR01500	256	TIGR01500, sepiapter_red, sepiapterin reductase	3e-09
cd09810	311	cd09810, LPOR_like_SDR_c_like, light-dependent pro	5e-09
cd08953	436	cd08953, KR_2_SDR_x, ketoreductase (KR), subgroup	1e-08
PRK12938	246	PRK12938, PRK12938, acetyacetyl-CoA reductase; Pro	2e-08
cd05361	242	cd05361, haloalcohol_DH_SDR_c-like, haloalcohol de	3e-08
cd09809	284	cd09809, human_WWOX_like_SDR_c-like, human WWOX (W	3e-08
PRK12742	237	PRK12742, PRK12742, oxidoreductase; Provisional	3e-08
PRK06196	315	PRK06196, PRK06196, oxidoreductase; Provisional	6e-08
cd09808	255	cd09808, DHRS-12_like_SDR_c-like, human dehydrogen	8e-08
PRK12859	256	PRK12859, PRK12859, 3-ketoacyl-(acyl-carrier-prote	1e-07
cd02266	186	cd02266, SDR, Short-chain dehydrogenases/reductase	2e-07
PRK08177	225	PRK08177, PRK08177, short chain dehydrogenase; Pro	2e-07
PRK12744	257	PRK12744, PRK12744, short chain dehydrogenase; Pro	3e-07
cd05274	375	cd05274, KR_FAS_SDR_x, ketoreductase (KR) and fatt	3e-07
cd08951	260	cd08951, DR_C-13_KR_SDR_c_like, daunorubicin C-13	3e-07
PRK08416	260	PRK08416, PRK08416, 7-alpha-hydroxysteroid dehydro	4e-07
PRK05854	313	PRK05854, PRK05854, short chain dehydrogenase; Pro	5e-07
COG0623	259	COG0623, FabI, Enoyl-[acyl-carrier-protein]	5e-07
cd05372	250	cd05372, ENR_SDR, Enoyl acyl carrier protein (ACP)	1e-06
PRK06940	275	PRK06940, PRK06940, short chain dehydrogenase; Pro	1e-06
cd05328	250	cd05328, 3alpha_HSD_SDR_c, alpha hydroxysteroid de	2e-06
PRK06720	169	PRK06720, PRK06720, hypothetical protein; Provisio	2e-06
PRK07453	322	PRK07453, PRK07453, protochlorophyllide oxidoreduc	2e-06
PRK09186	256	PRK09186, PRK09186, flagellin modification protein	8e-06
PRK06953	222	PRK06953, PRK06953, short chain dehydrogenase; Pro	1e-05
TIGR01289	314	TIGR01289, LPOR, light-dependent protochlorophylli	2e-05
PRK08303	305	PRK08303, PRK08303, short chain dehydrogenase; Pro	4e-05
TIGR02685	267	TIGR02685, pter_reduc_Leis, pteridine reductase	4e-05
cd08941	290	cd08941, 3KS_SDR_c, 3-keto steroid reductase, clas	9e-05
PRK08415	274	PRK08415, PRK08415, enoyl-(acyl carrier protein) r	2e-04
PRK08862	227	PRK08862, PRK08862, short chain dehydrogenase; Pro	4e-04
PRK07533	258	PRK07533, PRK07533, enoyl-(acyl carrier protein) r	5e-04
PLN00015	308	PLN00015, PLN00015, protochlorophyllide reductase	0.001

>gnl|CDD|187593 cd05332, 11beta-HSD1_like_SDR_c, 11beta-hydroxysteroid dehydrogenase type 1 (11beta-HSD1)-like, classical (c) SDRs

 Score =  226 bits (579), Expect = 2e-74
 Identities = 94/199 (47%), Positives = 128/199 (64%), Gaps = 4/199 (2%)

Query: 45  VSGKVVIITGASSGIGEHLAYEYARRGACLALCARREKSLEEVADTAREIGSPDVITIRA 104
           + GKVVIITGASSGIGE LAY  AR GA L L ARRE+ LEEV     E+G+P    +  
Sbjct: 1   LQGKVVIITGASSGIGEELAYHLARLGARLVLSARREERLEEVKSECLELGAPSPHVVPL 60

Query: 105 DVSKVDDCRSLVEETMNHFGRLDHLVNNAGISSVALFEDIVNITDFKQIMNINFWGSVYT 164
           D+S ++D   +VEE +  FG LD L+NNAGIS  +LF D  +I   ++IM +N++G V  
Sbjct: 61  DMSDLEDAEQVVEEALKLFGGLDILINNAGISMRSLFHD-TSIDVDRKIMEVNYFGPVAL 119

Query: 165 TRFAVPHLRY-TKGKIVVLSSAASWLTAPRMSFYNASKAALVLFFETLRVEL-GSDVGVT 222
           T+ A+PHL   ++G IVV+SS A  +  P  + Y ASK AL  FF++LR EL   ++ VT
Sbjct: 120 TKAALPHLIERSQGSIVVVSSIAGKIGVPFRTAYAASKHALQGFFDSLRAELSEPNISVT 179

Query: 223 IVTPGFIESELTQGKFLTG 241
           +V PG I++ +     L+G
Sbjct: 180 VVCPGLIDTNIAM-NALSG 197

Human 11beta_HSD1 catalyzes the NADP(H)-dependent interconversion of cortisone and cortisol. This subgroup also includes human dehydrogenase/reductase SDR family member 7C (DHRS7C) and DHRS7B. These proteins have the GxxxGxG nucleotide binding motif and S-Y-K catalytic triad characteristic of the SDRs, but have an atypical C-terminal domain that contributes to homodimerization contacts. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold (alpha/beta folding pattern with a central beta-sheet), an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Classical SDRs are typically about 250 residues long, while extended SDRs are approximately 350 residues. Sequence identity between different SDR enzymes are typically in the 15-30% range, but the enzymes share the Rossmann fold NAD-binding motif and characteristic NAD-binding and catalytic sequence patterns. These enzymes catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase (15-PGDH) numbering). In addition to the Tyr and Lys, there is often an upstream Ser (Ser-138, 15-PGDH numbering) and/or an Asn (Asn-107, 15-PGDH numbering) contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. Extended SDRs have additional elements in the C-terminal region, and typically have a TGXXGXXG cofactor binding motif. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid synthase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type ketoacyl reductases have a TGXXXGX(1-2)G NAD(P)-binding motif. Some atypical SDRs have lost catalytic activity and/or have an unusual NAD(P)-binding motif and missing or unusual active site residues. Reactions catalyzed within the SDR family include isomerization, decarboxylation, epimerization, C=N bond reduction, dehydratase activity, dehalogenation, Enoyl-CoA reduction, and carbonyl-alcohol oxidoreduction. Length = 257

>gnl|CDD|235726 PRK06181, PRK06181, short chain dehydrogenase; Provisional

 Score =  204 bits (520), Expect = 1e-65
 Identities = 83/190 (43%), Positives = 120/190 (63%), Gaps = 2/190 (1%)

Query: 47  GKVVIITGASSGIGEHLAYEYARRGACLALCARREKSLEEVADTAREIGSPDVITIRADV 106
           GKVVIITGAS GIG  LA   AR GA L L AR E  L  +A    + G    + +  DV
Sbjct: 1   GKVVIITGASEGIGRALAVRLARAGAQLVLAARNETRLASLAQELADHGGE-ALVVPTDV 59

Query: 107 SKVDDCRSLVEETMNHFGRLDHLVNNAGISSVALFEDIVNITDFKQIMNINFWGSVYTTR 166
           S  + C  L+E  +  FG +D LVNNAGI+  + F+++ +++ F+++M +N+ G+VY T 
Sbjct: 60  SDAEACERLIEAAVARFGGIDILVNNAGITMWSRFDELTDLSVFERVMRVNYLGAVYCTH 119

Query: 167 FAVPHLRYTKGKIVVLSSAASWLTAPRMSFYNASKAALVLFFETLRVEL-GSDVGVTIVT 225
            A+PHL+ ++G+IVV+SS A     P  S Y ASK AL  FF++LR+EL    V VT+V 
Sbjct: 120 AALPHLKASRGQIVVVSSLAGLTGVPTRSGYAASKHALHGFFDSLRIELADDGVAVTVVC 179

Query: 226 PGFIESELTQ 235
           PGF+ +++ +
Sbjct: 180 PGFVATDIRK 189

Length = 263

>gnl|CDD|212491 cd05233, SDR_c, classical (c) SDRs

 Score =  187 bits (476), Expect = 2e-59
 Identities = 71/188 (37%), Positives = 107/188 (56%), Gaps = 5/188 (2%)

Query: 50  VIITGASSGIGEHLAYEYARRGACLALCARREKSLEEVADTAREIGSPDVITIRADVSKV 109
            ++TGASSGIG  +A   AR GA + L  R E++L E+A      G+   + ++ADVS  
Sbjct: 1   ALVTGASSGIGRAIARRLAREGAKVVLADRNEEALAELAAIEALGGN--AVAVQADVSDE 58

Query: 110 DDCRSLVEETMNHFGRLDHLVNNAGISSVALFEDIVNITDFKQIMNINFWGSVYTTRFAV 169
           +D  +LVEE +  FGRLD LVNNAGI+     E++    D+ +++++N  G    TR A+
Sbjct: 59  EDVEALVEEALEEFGRLDILVNNAGIARPGPLEEL-TDEDWDRVLDVNLTGVFLLTRAAL 117

Query: 170 PHLRY-TKGKIVVLSSAASWLTAPRMSFYNASKAALVLFFETLRVELGSD-VGVTIVTPG 227
           PH++    G+IV +SS A     P  + Y ASKAAL     +L +EL    + V  V PG
Sbjct: 118 PHMKKQGGGRIVNISSVAGLRPLPGQAAYAASKAALEGLTRSLALELAPYGIRVNAVAPG 177

Query: 228 FIESELTQ 235
            +++ +  
Sbjct: 178 LVDTPMLA 185

SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold (alpha/beta folding pattern with a central beta-sheet), an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Classical SDRs are typically about 250 residues long, while extended SDRs are approximately 350 residues. Sequence identity between different SDR enzymes are typically in the 15-30% range, but the enzymes share the Rossmann fold NAD-binding motif and characteristic NAD-binding and catalytic sequence patterns. These enzymes catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, human prostaglandin dehydrogenase (PGDH) numbering). In addition to the Tyr and Lys, there is often an upstream Ser (Ser-138, PGDH numbering) and/or an Asn (Asn-107, PGDH numbering) contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. Extended SDRs have additional elements in the C-terminal region, and typically have a TGXXGXXG cofactor binding motif. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid synthase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type ketoacyl reductases have a TGXXXGX(1-2)G NAD(P)-binding motif. Some atypical SDRs have lost catalytic activity and/or have an unusual NAD(P)-binding motif and missing or unusual active site residues. Reactions catalyzed within the SDR family include isomerization, decarboxylation, epimerization, C=N bond reduction, dehydratase activity, dehalogenation, Enoyl-CoA reduction, and carbonyl-alcohol oxidoreduction. Length = 234

>gnl|CDD|223959 COG1028, FabG, Dehydrogenases with different specificities (related to short-chain alcohol dehydrogenases) [Secondary metabolites biosynthesis, transport, and catabolism / General function prediction only]

 Score =  166 bits (421), Expect = 6e-51
 Identities = 73/197 (37%), Positives = 109/197 (55%), Gaps = 6/197 (3%)

Query: 44  DVSGKVVIITGASSGIGEHLAYEYARRGACLALCARR--EKSLEEVADTAREIGSPDVIT 101
           D+SGKV ++TGASSGIG  +A   AR GA + + ARR  E++ E +A   +E G      
Sbjct: 2   DLSGKVALVTGASSGIGRAIARALAREGARVVVAARRSEEEAAEALAAAIKEAGGGRAAA 61

Query: 102 IRADVSKV-DDCRSLVEETMNHFGRLDHLVNNAGISSVALFEDIVNITDFKQIMNINFWG 160
           + ADVS   +   +LV      FGR+D LVNNAGI+      + +   D+ +++++N  G
Sbjct: 62  VAADVSDDEESVEALVAAAEEEFGRIDILVNNAGIAGPDAPLEELTEEDWDRVIDVNLLG 121

Query: 161 SVYTTRFAVPHLRYTKGKIVVLSSAASWLTAPRMSFYNASKAALVLFFETLRVELG-SDV 219
           +   TR A+P     K +IV +SS A     P  + Y ASKAAL+   + L +EL    +
Sbjct: 122 AFLLTRAALPL--MKKQRIVNISSVAGLGGPPGQAAYAASKAALIGLTKALALELAPRGI 179

Query: 220 GVTIVTPGFIESELTQG 236
            V  V PG+I++ +T  
Sbjct: 180 RVNAVAPGYIDTPMTAA 196

Length = 251

>gnl|CDD|187618 cd05360, SDR_c3, classical (c) SDR, subgroup 3

 Score =  163 bits (414), Expect = 5e-50
 Identities = 73/187 (39%), Positives = 110/187 (58%), Gaps = 6/187 (3%)

Query: 49  VVIITGASSGIGEHLAYEYARRGACLALCARREKSLEEVADTAREIGSPDVITIRADVSK 108
           VV+ITGASSGIG   A  +A RGA + L AR  ++L E+A   RE+G  + I + ADV+ 
Sbjct: 2   VVVITGASSGIGRATALAFAERGAKVVLAARSAEALHELAREVRELGG-EAIAVVADVAD 60

Query: 109 VDDCRSLVEETMNHFGRLDHLVNNAGISSVALFEDIVNITDFKQIMNINFWGSVYTTRFA 168
                   +  +  FGR+D  VNNAG++    FED V   +F+++ ++N+ G VY T  A
Sbjct: 61  AAQVERAADTAVERFGRIDTWVNNAGVAVFGRFED-VTPEEFRRVFDVNYLGHVYGTLAA 119

Query: 169 VPHLRYTK-GKIVVLSSAASWLTAPRMSFYNASKAALVLFFETLRVEL---GSDVGVTIV 224
           +PHLR    G ++ + S   + +AP  + Y+ASK A+  F E+LR EL   G+ + VT+V
Sbjct: 120 LPHLRRRGGGALINVGSLLGYRSAPLQAAYSASKHAVRGFTESLRAELAHDGAPISVTLV 179

Query: 225 TPGFIES 231
            P  + +
Sbjct: 180 QPTAMNT 186

These proteins are members of the classical SDR family, with a canonical active site triad (and also active site Asn) and a typical Gly-rich NAD-binding motif. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold (alpha/beta folding pattern with a central beta-sheet), an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Classical SDRs are typically about 250 residues long, while extended SDRS are approximately 350 residues. Sequence identity between different SDR enzymes are typically in the 15-30% range, but the enzymes share the Rossmann fold NAD-binding motif and characteristic NAD-binding and catalytic sequence patterns. These enzymes have a 3-glycine N-terminal NAD(P)(H)-binding pattern (typically, TGxxxGxG in classical SDRs and TGxxGxxG in extended SDRs), while substrate binding is in the C-terminal region. A critical catalytic Tyr residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase (15-PGDH) numbering), is often found in a conserved YXXXK pattern. In addition to the Tyr and Lys, there is often an upstream Ser (Ser-138, 15-PGDH numbering) and/or an Asn (Asn-107, 15-PGDH numbering) or additional Ser, contributing to the active site. Substrates for these enzymes include sugars, steroids, alcohols, and aromatic compounds. The standard reaction mechanism is a proton relay involving the conserved Tyr and Lys, as well as Asn (or Ser). Some SDR family members, including 17 beta-hydroxysteroid dehydrogenase contain an additional helix-turn-helix motif that is not generally found among SDRs. Length = 233

>gnl|CDD|187632 cd05374, 17beta-HSD-like_SDR_c, 17beta hydroxysteroid dehydrogenase-like, classical (c) SDRs

 Score =  162 bits (413), Expect = 1e-49
 Identities = 66/189 (34%), Positives = 102/189 (53%), Gaps = 7/189 (3%)

Query: 48  KVVIITGASSGIGEHLAYEYARRGACLALCARREKSLEEVADTAREIGSPDVITIRADVS 107
           KVV+ITG SSGIG  LA   A +G  +   AR    LE       E+ + ++  +  DV+
Sbjct: 1   KVVLITGCSSGIGLALALALAAQGYRVIATARNPDKLES----LGELLNDNLEVLELDVT 56

Query: 108 KVDDCRSLVEETMNHFGRLDHLVNNAGISSVALFEDIVNITDFKQIMNINFWGSVYTTRF 167
             +  ++ V+E +  FGR+D LVNNAG       E+  +I + +++  +N +G +  TR 
Sbjct: 57  DEESIKAAVKEVIERFGRIDVLVNNAGYGLFGPLEET-SIEEVRELFEVNVFGPLRVTRA 115

Query: 168 AVPHLR-YTKGKIVVLSSAASWLTAPRMSFYNASKAALVLFFETLRVEL-GSDVGVTIVT 225
            +P +R    G+IV +SS A  +  P +  Y ASKAAL    E+LR+EL    + VTI+ 
Sbjct: 116 FLPLMRKQGSGRIVNVSSVAGLVPTPFLGPYCASKAALEALSESLRLELAPFGIKVTIIE 175

Query: 226 PGFIESELT 234
           PG + +   
Sbjct: 176 PGPVRTGFA 184

17beta-hydroxysteroid dehydrogenases are a group of isozymes that catalyze activation and inactivation of estrogen and androgens. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold (alpha/beta folding pattern with a central beta-sheet), an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Classical SDRs are typically about 250 residues long, while extended SDRs are approximately 350 residues. Sequence identity between different SDR enzymes are typically in the 15-30% range, but the enzymes share the Rossmann fold NAD-binding motif and characteristic NAD-binding and catalytic sequence patterns. These enzymes catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase (15-PGDH) numbering). In addition to the Tyr and Lys, there is often an upstream Ser (Ser-138, 15-PGDH numbering) and/or an Asn (Asn-107, 15-PGDH numbering) contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. Extended SDRs have additional elements in the C-terminal region, and typically have a TGXXGXXG cofactor binding motif. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid synthase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type ketoacyl reductases have a TGXXXGX(1-2)G NAD(P)-binding motif. Some atypical SDRs have lost catalytic activity and/or have an unusual NAD(P)-binding motif and missing or unusual active site residues. Reactions catalyzed within the SDR family include isomerization, decarboxylation, epimerization, C=N bond reduction, dehydratase activity, dehalogenation, Enoyl-CoA reduction, and carbonyl-alcohol oxidoreduction. Length = 248

>gnl|CDD|235975 PRK07231, fabG, 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional

 Score =  162 bits (413), Expect = 1e-49
 Identities = 70/197 (35%), Positives = 104/197 (52%), Gaps = 10/197 (5%)

Query: 44  DVSGKVVIITGASSGIGEHLAYEYARRGACLALCARREKSLEEVADTAREIGSPD-VITI 102
            + GKV I+TGASSGIGE +A  +A  GA + +  R E++ E VA    EI +    I +
Sbjct: 2   RLEGKVAIVTGASSGIGEGIARRFAAEGARVVVTDRNEEAAERVAA---EILAGGRAIAV 58

Query: 103 RADVSKVDDCRSLVEETMNHFGRLDHLVNNAGISSVALFEDIVNIT--DFKQIMNINFWG 160
            ADVS   D  + V   +  FG +D LVNNAG +       ++++   +F +I  +N   
Sbjct: 59  AADVSDEADVEAAVAAALERFGSVDILVNNAGTTHR--NGPLLDVDEAEFDRIFAVNVKS 116

Query: 161 SVYTTRFAVPHLRYTK-GKIVVLSSAASWLTAPRMSFYNASKAALVLFFETLRVELGSD- 218
               T+ AVP +R    G IV ++S A     P + +YNASK A++   + L  ELG D 
Sbjct: 117 PYLWTQAAVPAMRGEGGGAIVNVASTAGLRPRPGLGWYNASKGAVITLTKALAAELGPDK 176

Query: 219 VGVTIVTPGFIESELTQ 235
           + V  V P  +E+ L +
Sbjct: 177 IRVNAVAPVVVETGLLE 193

Length = 251

>gnl|CDD|187622 cd05364, SDR_c11, classical (c) SDR, subgroup 11

 Score =  155 bits (393), Expect = 1e-46
 Identities = 78/192 (40%), Positives = 111/192 (57%), Gaps = 4/192 (2%)

Query: 46  SGKVVIITGASSGIGEHLAYEYARRGACLALCARREKSLEEVADTAREIGSPD--VITIR 103
           SGKV IITG+SSGIG   A  +AR GA LAL  R  + LEE   +  + G  +  ++ + 
Sbjct: 2   SGKVAIITGSSSGIGAGTAILFARLGARLALTGRDAERLEETRQSCLQAGVSEKKILLVV 61

Query: 104 ADVSKVDDCRSLVEETMNHFGRLDHLVNNAGISSVALFEDIVNITDFKQIMNINFWGSVY 163
           AD+++ +    ++  T+  FGRLD LVNNAGI +    ED  +I ++ ++MN+N    +Y
Sbjct: 62  ADLTEEEGQDRIISTTLAKFGRLDILVNNAGILAKGGGEDQ-DIEEYDKVMNLNLRAVIY 120

Query: 164 TTRFAVPHLRYTKGKIVVLSSAASWLTAPRMSFYNASKAALVLFFETLRVELGS-DVGVT 222
            T+ AVPHL  TKG+IV +SS A   + P + +Y  SKAAL  F     +EL    V V 
Sbjct: 121 LTKLAVPHLIKTKGEIVNVSSVAGGRSFPGVLYYCISKAALDQFTRCTALELAPKGVRVN 180

Query: 223 IVTPGFIESELT 234
            V+PG I +   
Sbjct: 181 SVSPGVIVTGFH 192

SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold (alpha/beta folding pattern with a central beta-sheet), an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Classical SDRs are typically about 250 residues long, while extended SDRs are approximately 350 residues. Sequence identity between different SDR enzymes are typically in the 15-30% range, but the enzymes share the Rossmann fold NAD-binding motif and characteristic NAD-binding and catalytic sequence patterns. These enzymes catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase (15-PGDH) numbering). In addition to the Tyr and Lys, there is often an upstream Ser (Ser-138, 15-PGDH numbering) and/or an Asn (Asn-107, 15-PGDH numbering) contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. Extended SDRs have additional elements in the C-terminal region, and typically have a TGXXGXXG cofactor binding motif. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid synthase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type ketoacyl reductases have a TGXXXGX(1-2)G NAD(P)-binding motif. Some atypical SDRs have lost catalytic activity and/or have an unusual NAD(P)-binding motif and missing or unusual active site residues. Reactions catalyzed within the SDR family include isomerization, decarboxylation, epimerization, C=N bond reduction, dehydratase activity, dehalogenation, Enoyl-CoA reduction, and carbonyl-alcohol oxidoreduction. Length = 253

>gnl|CDD|235935 PRK07109, PRK07109, short chain dehydrogenase; Provisional

 Score =  153 bits (390), Expect = 3e-45
 Identities = 65/190 (34%), Positives = 107/190 (56%), Gaps = 6/190 (3%)

Query: 45  VSGKVVIITGASSGIGEHLAYEYARRGACLALCARREKSLEEVADTAREIGSPDVITIRA 104
           +  +VV+ITGAS+G+G   A  +ARRGA + L AR E+ LE +A   R  G  + + + A
Sbjct: 6   IGRQVVVITGASAGVGRATARAFARRGAKVVLLARGEEGLEALAAEIRAAGG-EALAVVA 64

Query: 105 DVSKVDDCRSLVEETMNHFGRLDHLVNNAGISSVALFEDIVNITDFKQIMNINFWGSVYT 164
           DV+  +  ++  +      G +D  VNNA ++    FED+    +F+++  + + G V+ 
Sbjct: 65  DVADAEAVQAAADRAEEELGPIDTWVNNAMVTVFGPFEDV-TPEEFRRVTEVTYLGVVHG 123

Query: 165 TRFAVPHLRYT-KGKIVVLSSAASWLTAPRMSFYNASKAALVLFFETLRVEL---GSDVG 220
           T  A+ H+R   +G I+ + SA ++ + P  S Y A+K A+  F ++LR EL   GS V 
Sbjct: 124 TLAALRHMRPRDRGAIIQVGSALAYRSIPLQSAYCAAKHAIRGFTDSLRCELLHDGSPVS 183

Query: 221 VTIVTPGFIE 230
           VT+V P  + 
Sbjct: 184 VTMVQPPAVN 193

Length = 334

>gnl|CDD|235546 PRK05653, fabG, 3-ketoacyl-(acyl-carrier-protein) reductase; Validated

 Score =  147 bits (375), Expect = 6e-44
 Identities = 68/195 (34%), Positives = 110/195 (56%), Gaps = 8/195 (4%)

Query: 46  SGKVVIITGASSGIGEHLAYEYARRGACLALCARREKSLEEVADTAREIGSPDVITIRAD 105
            GK  ++TGAS GIG  +A   A  GA + +    E++ E +A   R  G  +   +  D
Sbjct: 4   QGKTALVTGASRGIGRAIALRLAADGAKVVIYDSNEEAAEALAAELRAAGG-EARVLVFD 62

Query: 106 VSKVDDCRSLVEETMNHFGRLDHLVNNAGISSVALFEDIVNITDFKQIMNINFWGSVYTT 165
           VS     R+L+E  +  FG LD LVNNAGI+  AL   + +  D+ +++++N  G+    
Sbjct: 63  VSDEAAVRALIEAAVEAFGALDILVNNAGITRDALLPRM-SEEDWDRVIDVNLTGTFNVV 121

Query: 166 RFAVPHLRYT-KGKIVVLSSAASWLTAPR-MSFYNASKAALVLFFETLRVELGSDVGVTI 223
           R A+P +     G+IV +SS  S +T     + Y+A+KA ++ F + L +EL S  G+T+
Sbjct: 122 RAALPPMIKARYGRIVNISS-VSGVTGNPGQTNYSAAKAGVIGFTKALALELASR-GITV 179

Query: 224 --VTPGFIESELTQG 236
             V PGFI++++T+G
Sbjct: 180 NAVAPGFIDTDMTEG 194

Length = 246

>gnl|CDD|235506 PRK05565, fabG, 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional

 Score =  142 bits (361), Expect = 8e-42
 Identities = 71/207 (34%), Positives = 116/207 (56%), Gaps = 7/207 (3%)

Query: 43  EDVSGKVVIITGASSGIGEHLAYEYARRGACLAL-CARREKSLEEVADTAREIGSPDVIT 101
             + GKV I+TGAS GIG  +A   A+ GA + +     E++ +E+ +  +E G  D I 
Sbjct: 1   MKLMGKVAIVTGASGGIGRAIAELLAKEGAKVVIAYDINEEAAQELLEEIKEEGG-DAIA 59

Query: 102 IRADVSKVDDCRSLVEETMNHFGRLDHLVNNAGISSVALFEDIVNITDFKQIMNINFWGS 161
           ++ADVS  +D  +LVE+ +  FG++D LVNNAGIS+  L  D +   ++ +++++N  G 
Sbjct: 60  VKADVSSEEDVENLVEQIVEKFGKIDILVNNAGISNFGLVTD-MTDEEWDRVIDVNLTGV 118

Query: 162 VYTTRFAVPHLRYTK-GKIVVLSSAASWLTAPRMSFYNASKAALVLFFETLRVELG-SDV 219
           +  TR+A+P++   K G IV +SS    + A     Y+ASK A+  F + L  EL  S +
Sbjct: 119 MLLTRYALPYMIKRKSGVIVNISSIWGLIGASCEVLYSASKGAVNAFTKALAKELAPSGI 178

Query: 220 GVTIVTPGFIESELTQGKFLTGRRQNS 246
            V  V PG I++E+      +   +  
Sbjct: 179 RVNAVAPGAIDTEM--WSSFSEEDKEG 203

Length = 247

>gnl|CDD|223377 COG0300, DltE, Short-chain dehydrogenases of various substrate specificities [General function prediction only]

 Score =  142 bits (359), Expect = 2e-41
 Identities = 71/198 (35%), Positives = 105/198 (53%), Gaps = 3/198 (1%)

Query: 43  EDVSGKVVIITGASSGIGEHLAYEYARRGACLALCARREKSLEEVADTAREIGSPDVITI 102
             + GK  +ITGASSGIG  LA + ARRG  L L ARRE  LE +A    +    +V  I
Sbjct: 2   GPMKGKTALITGASSGIGAELAKQLARRGYNLILVARREDKLEALAKELEDKTGVEVEVI 61

Query: 103 RADVSKVDDCRSLVEETMNHFGRLDHLVNNAGISSVALFEDIVNITDFKQIMNINFWGSV 162
            AD+S  +    L +E     G +D LVNNAG  +   F ++ ++ + ++++ +N     
Sbjct: 62  PADLSDPEALERLEDELKERGGPIDVLVNNAGFGTFGPFLEL-SLDEEEEMIQLNILALT 120

Query: 163 YTTRFAVPHL-RYTKGKIVVLSSAASWLTAPRMSFYNASKAALVLFFETLRVEL-GSDVG 220
             T+  +P +     G I+ + SAA  +  P M+ Y+A+KA ++ F E LR EL G+ V 
Sbjct: 121 RLTKAVLPGMVERGAGHIINIGSAAGLIPTPYMAVYSATKAFVLSFSEALREELKGTGVK 180

Query: 221 VTIVTPGFIESELTQGKF 238
           VT V PG   +E    K 
Sbjct: 181 VTAVCPGPTRTEFFDAKG 198

Length = 265

>gnl|CDD|187643 cd08939, KDSR-like_SDR_c, 3-ketodihydrosphingosine reductase (KDSR) and related proteins, classical (c) SDR

 Score =  140 bits (356), Expect = 4e-41
 Identities = 63/191 (32%), Positives = 99/191 (51%), Gaps = 6/191 (3%)

Query: 47  GKVVIITGASSGIGEHLAYEYARRGACLALCARREKSLEEVADTAREIGSPD---VITIR 103
           GK V+ITG SSGIG+ LA E  + GA + + AR E  LEE  +      +     V  I 
Sbjct: 1   GKHVLITGGSSGIGKALAKELVKEGANVIIVARSESKLEEAVEEIEAEANASGQKVSYIS 60

Query: 104 ADVSKVDDCRSLVEETMNHFGRLDHLVNNAGISSVALFEDIVNITDFKQIMNINFWGSVY 163
           AD+S  ++      + +   G  D +VN AGIS   LFED+    +F++ M++N++GS+ 
Sbjct: 61  ADLSDYEEVEQAFAQAVEKGGPPDLVVNCAGISIPGLFEDL-TAEEFERGMDVNYFGSLN 119

Query: 164 TTRFAVPHLRYTKGKIVVL-SSAASWLTAPRMSFYNASKAALVLFFETLRVEL-GSDVGV 221
                +P ++  +   +V  SS A+ +     S Y  SK AL    E+LR EL   ++ V
Sbjct: 120 VAHAVLPLMKEQRPGHIVFVSSQAALVGIYGYSAYCPSKFALRGLAESLRQELKPYNIRV 179

Query: 222 TIVTPGFIESE 232
           ++V P   ++ 
Sbjct: 180 SVVYPPDTDTP 190

These proteins include members identified as KDSR, ribitol type dehydrogenase, and others. The group shows strong conservation of the active site tetrad and glycine rich NAD-binding motif of the classical SDRs. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold (alpha/beta folding pattern with a central beta-sheet), an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Classical SDRs are typically about 250 residues long, while extended SDRs are approximately 350 residues. Sequence identity between different SDR enzymes are typically in the 15-30% range, but the enzymes share the Rossmann fold NAD-binding motif and characteristic NAD-binding and catalytic sequence patterns. These enzymes catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase (15-PGDH) numbering). In addition to the Tyr and Lys, there is often an upstream Ser (Ser-138, 15-PGDH numbering) and/or an Asn (Asn-107, 15-PGDH numbering) contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. Extended SDRs have additional elements in the C-terminal region, and typically have a TGXXGXXG cofactor binding motif. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid synthase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type ketoacyl reductases have a TGXXXGX(1-2)G NAD(P)-binding motif. Some atypical SDRs have lost catalytic activity and/or have an unusual NAD(P)-binding motif and missing or unusual active site residues. Reactions catalyzed within the SDR family include isomerization, decarboxylation, epimerization, C=N bond reduction, dehydratase activity, dehalogenation, Enoyl-CoA reduction, and carbonyl-alcohol oxidoreduction. Length = 239

>gnl|CDD|235500 PRK05557, fabG, 3-ketoacyl-(acyl-carrier-protein) reductase; Validated

 Score =  139 bits (353), Expect = 1e-40
 Identities = 61/192 (31%), Positives = 98/192 (51%), Gaps = 5/192 (2%)

Query: 46  SGKVVIITGASSGIGEHLAYEYARRGACLAL-CARREKSLEEVADTAREIGSPDVITIRA 104
            GKV ++TGAS GIG  +A   A +GA + +  A  E   E +      +G    + ++ 
Sbjct: 4   EGKVALVTGASRGIGRAIAERLAAQGANVVINYASSEAGAEALVAEIGALGG-KALAVQG 62

Query: 105 DVSKVDDCRSLVEETMNHFGRLDHLVNNAGISSVALFEDIVNITDFKQIMNINFWGSVYT 164
           DVS  +     V+E    FG +D LVNNAGI+   L   +    D+ ++++ N  G    
Sbjct: 63  DVSDAESVERAVDEAKAEFGGVDILVNNAGITRDNLLMRM-KEEDWDRVIDTNLTGVFNL 121

Query: 165 TRFAVPHLRYTK-GKIVVLSSAASWLTAPRMSFYNASKAALVLFFETLRVELGS-DVGVT 222
           T+     +   + G+I+ +SS    +  P  + Y ASKA ++ F ++L  EL S  + V 
Sbjct: 122 TKAVARPMMKQRSGRIINISSVVGLMGNPGQANYAASKAGVIGFTKSLARELASRGITVN 181

Query: 223 IVTPGFIESELT 234
            V PGFIE+++T
Sbjct: 182 AVAPGFIETDMT 193

Length = 248

>gnl|CDD|226674 COG4221, COG4221, Short-chain alcohol dehydrogenase of unknown specificity [General function prediction only]

 Score =  139 bits (353), Expect = 1e-40
 Identities = 71/194 (36%), Positives = 108/194 (55%), Gaps = 6/194 (3%)

Query: 42  SEDVSGKVVIITGASSGIGEHLAYEYARRGACLALCARREKSLEEVADTAREIGSPDVIT 101
              + GKV +ITGASSGIGE  A   A  GA + L ARRE+ LE +AD   EIG+   + 
Sbjct: 1   MTTLKGKVALITGASSGIGEATARALAEAGAKVVLAARREERLEALAD---EIGAGAALA 57

Query: 102 IRADVSKVDDCRSLVEETMNHFGRLDHLVNNAGISSVALFEDIVNITDFKQIMNINFWGS 161
           +  DV+      + +E     FGR+D LVNNAG++     ++  ++ D+ ++++ N  G 
Sbjct: 58  LALDVTDRAAVEAAIEALPEEFGRIDILVNNAGLALGDPLDE-ADLDDWDRMIDTNVKGL 116

Query: 162 VYTTRFAVPHLRYTK-GKIVVLSSAASWLTAPRMSFYNASKAALVLFFETLRVEL-GSDV 219
           +  TR  +P +   K G I+ L S A     P  + Y A+KAA+  F   LR EL G+ +
Sbjct: 117 LNGTRAVLPGMVERKSGHIINLGSIAGRYPYPGGAVYGATKAAVRAFSLGLRQELAGTGI 176

Query: 220 GVTIVTPGFIESEL 233
            VT+++PG +E+  
Sbjct: 177 RVTVISPGLVETTE 190

Length = 246

>gnl|CDD|235633 PRK05872, PRK05872, short chain dehydrogenase; Provisional

 Score =  140 bits (355), Expect = 2e-40
 Identities = 68/195 (34%), Positives = 109/195 (55%), Gaps = 6/195 (3%)

Query: 44  DVSGKVVIITGASSGIGEHLAYEYARRGACLALCARREKSLEEVADTAREIGSPD-VITI 102
            ++GKVV++TGA+ GIG  LA     RGA LAL    E  L  +A    E+G  D V+T+
Sbjct: 6   SLAGKVVVVTGAARGIGAELARRLHARGAKLALVDLEEAELAALAA---ELGGDDRVLTV 62

Query: 103 RADVSKVDDCRSLVEETMNHFGRLDHLVNNAGISSVALFEDIVNITDFKQIMNINFWGSV 162
            ADV+ +   ++  EE +  FG +D +V NAGI+S       V+   F++++++N  G  
Sbjct: 63  VADVTDLAAMQAAAEEAVERFGGIDVVVANAGIASGGSVAQ-VDPDAFRRVIDVNLLGVF 121

Query: 163 YTTRFAVPHLRYTKGKIVVLSSAASWLTAPRMSFYNASKAALVLFFETLRVELGSD-VGV 221
           +T R  +P L   +G ++ +SS A++  AP M+ Y ASKA +  F   LR+E+    V V
Sbjct: 122 HTVRATLPALIERRGYVLQVSSLAAFAAAPGMAAYCASKAGVEAFANALRLEVAHHGVTV 181

Query: 222 TIVTPGFIESELTQG 236
                 +I+++L + 
Sbjct: 182 GSAYLSWIDTDLVRD 196

Length = 296

>gnl|CDD|187598 cd05339, 17beta-HSDXI-like_SDR_c, human 17-beta-hydroxysteroid dehydrogenase XI-like, classical (c) SDRs

 Score =  136 bits (346), Expect = 1e-39
 Identities = 64/193 (33%), Positives = 103/193 (53%), Gaps = 7/193 (3%)

Query: 49  VVIITGASSGIGEHLAYEYARRGACLALCARREKSLEEVADTAREIGSPDVITIRADVSK 108
           +V+ITG  SGIG  LA E+A+RGA + +    EK  EE A+  R+ G   V   + DVSK
Sbjct: 1   IVLITGGGSGIGRLLALEFAKRGAKVVILDINEKGAEETANNVRKAG-GKVHYYKCDVSK 59

Query: 109 VDDCRSLVEETMNHFGRLDHLVNNAGISSVALFEDIVNITDFKQIMNINFWGSVYTTRFA 168
            ++     ++     G +  L+NNAG+ S     ++ +  + ++   +N     +TT+  
Sbjct: 60  REEVYEAAKKIKKEVGDVTILINNAGVVSGKKLLELPD-EEIEKTFEVNTLAHFWTTKAF 118

Query: 169 VPH-LRYTKGKIVVLSSAASWLTAPRMSFYNASKAALVLFFETLRVELGSD----VGVTI 223
           +P  L    G IV ++S A  ++   ++ Y ASKAA V F E+LR+EL +     +  T+
Sbjct: 119 LPDMLERNHGHIVTIASVAGLISPAGLADYCASKAAAVGFHESLRLELKAYGKPGIKTTL 178

Query: 224 VTPGFIESELTQG 236
           V P FI + + QG
Sbjct: 179 VCPYFINTGMFQG 191

17-beta-hydroxysteroid dehydrogenases (17betaHSD) are a group of isozymes that catalyze activation and inactivation of estrogen and androgens. 17betaHSD type XI, a classical SDR, preferentially converts 3alpha-adiol to androsterone but not numerous other tested steroids. This subgroup of classical SDRs also includes members identified as retinol dehydrogenases, which convert retinol to retinal, a property that overlaps with 17betaHSD activity. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold (alpha/beta folding pattern with a central beta-sheet), an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Classical SDRs are typically about 250 residues long, while extended SDRS are approximately 350 residues. Sequence identity between different SDR enzymes are typically in the 15-30% range, but the enzymes share the Rossmann fold NAD-binding motif and characteristic NAD-binding and catalytic sequence patterns. These enzymes have a 3-glycine N-terminal NAD(P)(H)-binding pattern (typically, TGxxxGxG in classical SDRs and TGxxGxxG in extended SDRs), while substrate binding is in the C-terminal region. A critical catalytic Tyr residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase (15-PGDH) numbering), is often found in a conserved YXXXK pattern. In addition to the Tyr and Lys, there is often an upstream Ser (Ser-138, 15-PGDH numbering) and/or an Asn (Asn-107, 15-PGDH numbering) or additional Ser, contributing to the active site. Substrates for these enzymes include sugars, steroids, alcohols, and aromatic compounds. The standard reaction mechanism is a proton relay involving the conserved Tyr and Lys, as well as Asn (or Ser). Some SDR family members, including 17 beta-hydroxysteroid dehydrogenase contain an additional helix-turn-helix motif that is not generally found among SDRs. Length = 243

>gnl|CDD|187639 cd08934, CAD_SDR_c, clavulanic acid dehydrogenase (CAD), classical (c) SDR

 Score =  136 bits (345), Expect = 1e-39
 Identities = 75/190 (39%), Positives = 105/190 (55%), Gaps = 4/190 (2%)

Query: 47  GKVVIITGASSGIGEHLAYEYARRGACLALCARREKSLEEVADTAREIGSPDVITIRADV 106
           GKV ++TGASSGIGE  A   A  GA +A+ ARR   LE +AD     G    + +  DV
Sbjct: 3   GKVALVTGASSGIGEATARALAAEGAAVAIAARRVDRLEALADELEAEGG-KALVLELDV 61

Query: 107 SKVDDCRSLVEETMNHFGRLDHLVNNAGISSVALFEDIVNITDFKQIMNINFWGSVYTTR 166
           +      + VE T+   GRLD LVNNAGI  +   ED  + TD+ ++++ N  G +YTT 
Sbjct: 62  TDEQQVDAAVERTVEALGRLDILVNNAGIMLLGPVED-ADTTDWTRMIDTNLLGLMYTTH 120

Query: 167 FAVPHLR-YTKGKIVVLSSAASWLTAPRMSFYNASKAALVLFFETLRVELGSD-VGVTIV 224
            A+PH     KG IV +SS A  +     + YNA+K  +  F E LR E+    V V ++
Sbjct: 121 AALPHHLLRNKGTIVNISSVAGRVAVRNSAVYNATKFGVNAFSEGLRQEVTERGVRVVVI 180

Query: 225 TPGFIESELT 234
            PG +++EL 
Sbjct: 181 EPGTVDTELR 190

CAD catalyzes the NADP-dependent reduction of clavulanate-9-aldehyde to clavulanic acid, a beta-lactamase inhibitor. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold (alpha/beta folding pattern with a central beta-sheet), an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Classical SDRs are typically about 250 residues long, while extended SDRs are approximately 350 residues. Sequence identity between different SDR enzymes are typically in the 15-30% range, but the enzymes share the Rossmann fold NAD-binding motif and characteristic NAD-binding and catalytic sequence patterns. These enzymes catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase (15-PGDH) numbering). In addition to the Tyr and Lys, there is often an upstream Ser (Ser-138, 15-PGDH numbering) and/or an Asn (Asn-107, 15-PGDH numbering) contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. Extended SDRs have additional elements in the C-terminal region, and typically have a TGXXGXXG cofactor binding motif. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid synthase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type ketoacyl reductases have a TGXXXGX(1-2)G NAD(P)-binding motif. Some atypical SDRs have lost catalytic activity and/or have an unusual NAD(P)-binding motif and missing or unusual active site residues. Reactions catalyzed within the SDR family include isomerization, decarboxylation, epimerization, C=N bond reduction, dehydratase activity, dehalogenation, Enoyl-CoA reduction, and carbonyl-alcohol oxidoreduction. Length = 243

>gnl|CDD|183775 PRK12826, PRK12826, 3-ketoacyl-(acyl-carrier-protein) reductase; Reviewed

 Score =  135 bits (341), Expect = 8e-39
 Identities = 58/202 (28%), Positives = 97/202 (48%), Gaps = 13/202 (6%)

Query: 44  DVSGKVVIITGASSGIGEHLAYEYARRGACLALCARREKSLEEVADTAREIGSPDVITIR 103
           D+ G+V ++TGA+ GIG  +A   A  GA + +           A+     G       +
Sbjct: 3   DLEGRVALVTGAARGIGRAIAVRLAADGAEVIVVDICGDDAAATAELVEAAG-GKARARQ 61

Query: 104 ADVSKVDDCRSLVEETMNHFGRLDHLVNNAGISSVALFEDIVNITDFKQIMNINFWGSVY 163
            DV      ++ V   +  FGRLD LV NAGI  +  F ++ +   +++++++N  G+  
Sbjct: 62  VDVRDRAALKAAVAAGVEDFGRLDILVANAGIFPLTPFAEM-DDEQWERVIDVNLTGTFL 120

Query: 164 TTRFAVPHLRYTK-GKIVVLSSAASWLTAPRMSF-----YNASKAALVLFFETLRVELGS 217
            T+ A+P L     G+IV+ SS    +  PR+ +     Y ASKA LV F   L +EL +
Sbjct: 121 LTQAALPALIRAGGGRIVLTSS----VAGPRVGYPGLAHYAASKAGLVGFTRALALELAA 176

Query: 218 D-VGVTIVTPGFIESELTQGKF 238
             + V  V PG +++ +     
Sbjct: 177 RNITVNSVHPGGVDTPMAGNLG 198

Length = 251

>gnl|CDD|183778 PRK12829, PRK12829, short chain dehydrogenase; Provisional

 Score =  135 bits (341), Expect = 9e-39
 Identities = 63/196 (32%), Positives = 95/196 (48%), Gaps = 6/196 (3%)

Query: 44  DVSGKVVIITGASSGIGEHLAYEYARRGACLALCARREKSLEEVADTAREIGSPDVITIR 103
            + G  V++TG +SGIG  +A  +A  GA + +C   E     +A TA  +    V    
Sbjct: 8   PLDGLRVLVTGGASGIGRAIAEAFAEAGARVHVCDVSE---AALAATAARLPGAKVTATV 64

Query: 104 ADVSKVDDCRSLVEETMNHFGRLDHLVNNAGISSVALFEDIVNITDFKQIMNINFWGSVY 163
           ADV+       + +  +  FG LD LVNNAGI+      D +    ++Q + +N  G  Y
Sbjct: 65  ADVADPAQVERVFDTAVERFGGLDVLVNNAGIAGPTGGIDEITPEQWEQTLAVNLNGQFY 124

Query: 164 TTRFAVPHLRYTK--GKIVVLSSAASWLTAPRMSFYNASKAALVLFFETLRVELG-SDVG 220
             R AVP L+ +   G I+ LSS A  L  P  + Y ASK A+V   ++L +ELG   + 
Sbjct: 125 FARAAVPLLKASGHGGVIIALSSVAGRLGYPGRTPYAASKWAVVGLVKSLAIELGPLGIR 184

Query: 221 VTIVTPGFIESELTQG 236
           V  + PG +     + 
Sbjct: 185 VNAILPGIVRGPRMRR 200

Length = 264

>gnl|CDD|183833 PRK12939, PRK12939, short chain dehydrogenase; Provisional

 Score =  132 bits (334), Expect = 8e-38
 Identities = 61/192 (31%), Positives = 95/192 (49%), Gaps = 6/192 (3%)

Query: 46  SGKVVIITGASSGIGEHLAYEYARRGACLALCARREKSLEEVADTAREIGSPDVITIRAD 105
           +GK  ++TGA+ G+G   A   A  GA +A          E+A      G      I AD
Sbjct: 6   AGKRALVTGAARGLGAAFAEALAEAGATVAFNDGLAAEARELAAALEAAGG-RAHAIAAD 64

Query: 106 VSKVDDCRSLVEETMNHFGRLDHLVNNAGISSVALFEDIVNITDFKQIMNINFWGSVYTT 165
           ++     +   +      G LD LVNNAGI++     ++ +I  +  +MN+N  G+    
Sbjct: 65  LADPASVQRFFDAAAAALGGLDGLVNNAGITNSKSATEL-DIDTWDAVMNVNVRGTFLML 123

Query: 166 RFAVPHLR-YTKGKIVVLSSAASWLTAPRMSFYNASKAALVLFFETLRVELGSDVGVTI- 223
           R A+PHLR   +G+IV L+S  +   AP++  Y ASK A++    +L  ELG   G+T+ 
Sbjct: 124 RAALPHLRDSGRGRIVNLASDTALWGAPKLGAYVASKGAVIGMTRSLARELGGR-GITVN 182

Query: 224 -VTPGFIESELT 234
            + PG   +E T
Sbjct: 183 AIAPGLTATEAT 194

Length = 250

>gnl|CDD|235545 PRK05650, PRK05650, short chain dehydrogenase; Provisional

 Score =  131 bits (331), Expect = 4e-37
 Identities = 69/186 (37%), Positives = 101/186 (54%), Gaps = 4/186 (2%)

Query: 50  VIITGASSGIGEHLAYEYARRGACLALCARREKSLEEVADTAREIGSPDVITIRADVSKV 109
           V+ITGA+SG+G  +A  +AR G  LAL    E+  EE     RE G  D    R DV   
Sbjct: 3   VMITGAASGLGRAIALRWAREGWRLALADVNEEGGEETLKLLREAG-GDGFYQRCDVRDY 61

Query: 110 DDCRSLVEETMNHFGRLDHLVNNAGISSVALFEDIVNITDFKQIMNINFWGSVYTTRFAV 169
               +L +     +G +D +VNNAG++S   FE+ +++ D+   + IN  G V   +  +
Sbjct: 62  SQLTALAQACEEKWGGIDVIVNNAGVASGGFFEE-LSLEDWDWQIAINLMGVVKGCKAFL 120

Query: 170 PHLRYTK-GKIVVLSSAASWLTAPRMSFYNASKAALVLFFETLRVELGSD-VGVTIVTPG 227
           P  +  K G+IV ++S A  +  P MS YN +KA +V   ETL VEL  D +GV +V P 
Sbjct: 121 PLFKRQKSGRIVNIASMAGLMQGPAMSSYNVAKAGVVALSETLLVELADDEIGVHVVCPS 180

Query: 228 FIESEL 233
           F ++ L
Sbjct: 181 FFQTNL 186

Length = 270

>gnl|CDD|187608 cd05350, SDR_c6, classical (c) SDR, subgroup 6

 Score =  129 bits (327), Expect = 6e-37
 Identities = 65/189 (34%), Positives = 103/189 (54%), Gaps = 8/189 (4%)

Query: 50  VIITGASSGIGEHLAYEYARRGACLALCARREKSLEEVADTAREIGSPD--VITIRADVS 107
           V+ITGASSGIG  LA E+A+ G  +AL ARR   L+E+     E+ +P+  V     DV+
Sbjct: 1   VLITGASSGIGRALAREFAKAGYNVALAARRTDRLDELKA---ELLNPNPSVEVEILDVT 57

Query: 108 KVDDCRSLVEETMNHFGRLDHLVNNAGISSVALFEDIVNITDFKQIMNINFWGSVYTTRF 167
             +  + ++ E     G LD ++ NAG+       D+     F++ ++ N  G+      
Sbjct: 58  DEERNQLVIAELEAELGGLDLVIINAGVGKGTSLGDLS-FKAFRETIDTNLLGAAAILEA 116

Query: 168 AVPHLRYTK-GKIVVLSSAASWLTAPRMSFYNASKAALVLFFETLRVEL-GSDVGVTIVT 225
           A+P  R    G +V++SS A+    P  + Y+ASKAAL    E+LR ++    + VT++ 
Sbjct: 117 ALPQFRAKGRGHLVLISSVAALRGLPGAAAYSASKAALSSLAESLRYDVKKRGIRVTVIN 176

Query: 226 PGFIESELT 234
           PGFI++ LT
Sbjct: 177 PGFIDTPLT 185

These proteins are members of the classical SDR family, with a canonical active site tetrad and a fairly well conserved typical Gly-rich NAD-binding motif. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold (alpha/beta folding pattern with a central beta-sheet), an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Classical SDRs are typically about 250 residues long, while extended SDRS are approximately 350 residues. Sequence identity between different SDR enzymes are typically in the 15-30% range, but the enzymes share the Rossmann fold NAD-binding motif and characteristic NAD-binding and catalytic sequence patterns. These enzymes have a 3-glycine N-terminal NAD(P)(H)-binding pattern (typically, TGxxxGxG in classical SDRs and TGxxGxxG in extended SDRs), while substrate binding is in the C-terminal region. A critical catalytic Tyr residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase (15-PGDH) numbering), is often found in a conserved YXXXK pattern. In addition to the Tyr and Lys, there is often an upstream Ser (Ser-138, 15-PGDH numbering) and/or an Asn (Asn-107, 15-PGDH numbering) or additional Ser, contributing to the active site. Substrates for these enzymes include sugars, steroids, alcohols, and aromatic compounds. The standard reaction mechanism is a proton relay involving the conserved Tyr and Lys, as well as Asn (or Ser). Some SDR family members, including 17 beta-hydroxysteroid dehydrogenase contain an additional helix-turn-helix motif that is not generally found among SDRs. Length = 239

>gnl|CDD|187620 cd05362, THN_reductase-like_SDR_c, tetrahydroxynaphthalene/trihydroxynaphthalene reductase-like, classical (c) SDRs

 Score =  128 bits (325), Expect = 2e-36
 Identities = 62/192 (32%), Positives = 96/192 (50%), Gaps = 9/192 (4%)

Query: 46  SGKVVIITGASSGIGEHLAYEYARRGACLAL-CARREKSLEEVADTAREIGSPDVITIRA 104
           +GKV ++TGAS GIG  +A   AR GA + +  A  + + EEV       G    I ++A
Sbjct: 2   AGKVALVTGASRGIGRAIAKRLARDGASVVVNYASSKAAAEEVVAEIEAAG-GKAIAVQA 60

Query: 105 DVSKVDDCRSLVEETMNHFGRLDHLVNNAGISSVALFEDIVNITD--FKQIMNINFWGSV 162
           DVS       L +     FG +D LVNNAG+    L + I   ++  F ++  +N  G+ 
Sbjct: 61  DVSDPSQVARLFDAAEKAFGGVDILVNNAGVM---LKKPIAETSEEEFDRMFTVNTKGAF 117

Query: 163 YTTRFAVPHLRYTKGKIVVLSSAASWLTAPRMSFYNASKAALVLFFETLRVELGS-DVGV 221
           +  + A   LR   G+I+ +SS+ +    P    Y  SKAA+  F   L  ELG   + V
Sbjct: 118 FVLQEAAKRLR-DGGRIINISSSLTAAYTPNYGAYAGSKAAVEAFTRVLAKELGGRGITV 176

Query: 222 TIVTPGFIESEL 233
             V PG +++++
Sbjct: 177 NAVAPGPVDTDM 188

1,3,6,8-tetrahydroxynaphthalene reductase (4HNR) of Magnaporthe grisea and the related 1,3,8-trihydroxynaphthalene reductase (3HNR) are typical members of the SDR family containing the canonical glycine rich NAD(P)-binding site and active site tetrad, and function in fungal melanin biosynthesis. This subgroup also includes an SDR from Norway spruce that may function to protect against both biotic and abitoic stress. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold (alpha/beta folding pattern with a central beta-sheet), an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Classical SDRs are typically about 250 residues long, while extended SDRs are approximately 350 residues. Sequence identity between different SDR enzymes are typically in the 15-30% range, but the enzymes share the Rossmann fold NAD-binding motif and characteristic NAD-binding and catalytic sequence patterns. These enzymes catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase (15-PGDH) numbering). In addition to the Tyr and Lys, there is often an upstream Ser (Ser-138, 15-PGDH numbering) and/or an Asn (Asn-107, 15-PGDH numbering) contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. Extended SDRs have additional elements in the C-terminal region, and typically have a TGXXGXXG cofactor binding motif. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid synthase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type ketoacyl reductases have a TGXXXGX(1-2)G NAD(P)-binding motif. Some atypical SDRs have lost catalytic activity and/or have an unusual NAD(P)-binding motif and missing or unusual active site residues. Reactions catalyzed within the SDR family include isomerization, decarboxylation, epimerization, C=N bond reduction, dehydratase activity, dehalogenation, Enoyl-CoA reduction, and carbonyl-alcohol oxidoreduction. Length = 243

>gnl|CDD|235962 PRK07201, PRK07201, short chain dehydrogenase; Provisional

 Score =  135 bits (342), Expect = 2e-36
 Identities = 68/185 (36%), Positives = 97/185 (52%), Gaps = 8/185 (4%)

Query: 45  VSGKVVIITGASSGIGEHLAYEYARRGACLALCARREKSLEEVADTAREIGSPDVITIRA 104
           + GKVV+ITGASSGIG   A + A  GA + L AR  ++L+E+    R  G         
Sbjct: 369 LVGKVVLITGASSGIGRATAIKVAEAGATVFLVARNGEALDELVAEIRAKGG-TAHAYTC 427

Query: 105 DVSKVDDCRSLVEETMNHFGRLDHLVNNAGIS---SVALFEDIVNITDFKQIMNINFWGS 161
           D++        V++ +   G +D+LVNNAG S   SV    D     D+++ M +N++G+
Sbjct: 428 DLTDSAAVDHTVKDILAEHGHVDYLVNNAGRSIRRSVENSTD--RFHDYERTMAVNYFGA 485

Query: 162 VYTTRFAVPHLRYTK-GKIVVLSSAASWLTAPRMSFYNASKAALVLFFETLRVELGSDVG 220
           V      +PH+R  + G +V +SS      APR S Y ASKAAL  F +    E  SD G
Sbjct: 486 VRLILGLLPHMRERRFGHVVNVSSIGVQTNAPRFSAYVASKAALDAFSDVAASETLSD-G 544

Query: 221 VTIVT 225
           +T  T
Sbjct: 545 ITFTT 549

Length = 657

>gnl|CDD|187584 cd05323, ADH_SDR_c_like, insect type alcohol dehydrogenase (ADH)-like, classical (c) SDRs

 Score =  127 bits (321), Expect = 6e-36
 Identities = 56/193 (29%), Positives = 90/193 (46%), Gaps = 8/193 (4%)

Query: 48  KVVIITGASSGIGEHLAYEYARRGACLALCARREKSLEEVADTAREIGSPDVITIRADVS 107
           KV IITG +SGIG   A    ++GA +A+  R E      A+            ++ DV+
Sbjct: 1   KVAIITGGASGIGLATAKLLLKKGAKVAILDRNEN-PGAAAELQAINPKVKATFVQCDVT 59

Query: 108 KVDDCRSLVEETMNHFGRLDHLVNNAGIS-SVALFEDIVNITDFKQIMNINFWGSVYTTR 166
             +   +  ++ +  FGR+D L+NNAGI    +          +++ +++N  G + TT 
Sbjct: 60  SWEQLAAAFKKAIEKFGRVDILINNAGILDEKSYLFAGKLPPPWEKTIDVNLTGVINTTY 119

Query: 167 FAVPHLRYTK----GKIVVLSSAASWLTAPRMSFYNASKAALVLFFETLRVELGSDVGVT 222
            A+ ++   K    G IV + S A    AP+   Y+ASK  +V F  +L   L    GV 
Sbjct: 120 LALHYMDKNKGGKGGVIVNIGSVAGLYPAPQFPVYSASKHGVVGFTRSLADLLEYKTGVR 179

Query: 223 IVT--PGFIESEL 233
           +    PGF  + L
Sbjct: 180 VNAICPGFTNTPL 192

This subgroup contains insect type ADH, and 15-hydroxyprostaglandin dehydrogenase (15-PGDH) type I; these proteins are classical SDRs. ADH catalyzes the NAD+-dependent oxidation of alcohols to aldehydes/ketones. This subgroup is distinct from the zinc-dependent alcohol dehydrogenases of the medium chain dehydrogenase/reductase family, and evolved in fruit flies to allow the digestion of fermenting fruit. 15-PGDH catalyzes the NAD-dependent interconversion of (5Z,13E)-(15S)-11alpha,15-dihydroxy-9-oxoprost-13-enoate and (5Z,13E)-11alpha-hydroxy-9,15-dioxoprost-13-enoate, and has a typical SDR glycine-rich NAD-binding motif, which is not fully present in ADH. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold (alpha/beta folding pattern with a central beta-sheet), an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Classical SDRs are typically about 250 residues long, while extended SDRs are approximately 350 residues. Sequence identity between different SDR enzymes are typically in the 15-30% range, but the enzymes share the Rossmann fold NAD-binding motif and characteristic NAD-binding and catalytic sequence patterns. These enzymes catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase (15-PGDH) numbering). In addition to the Tyr and Lys, there is often an upstream Ser (Ser-138, 15-PGDH numbering) and/or an Asn (Asn-107, 15-PGDH numbering) contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. Extended SDRs have additional elements in the C-terminal region, and typically have a TGXXGXXG cofactor binding motif. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid synthase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type ketoacyl reductases have a TGXXXGX(1-2)G NAD(P)-binding motif. Some atypical SDRs have lost catalytic activity and/or have an unusual NAD(P)-binding motif and missing or unusual active site residues. Reactions catalyzed within the SDR family include isomerization, decarboxylation, epimerization, C=N bond reduction, dehydratase activity, dehalogenation, Enoyl-CoA reduction, and carbonyl-alcohol oxidoreduction. Length = 244

>gnl|CDD|187594 cd05333, BKR_SDR_c, beta-Keto acyl carrier protein reductase (BKR), involved in Type II FAS, classical (c) SDRs

 Score =  126 bits (320), Expect = 7e-36
 Identities = 63/191 (32%), Positives = 105/191 (54%), Gaps = 8/191 (4%)

Query: 48  KVVIITGASSGIGEHLAYEYARRGACLALCARREKSLEEVADTAREIGSPDVITIRADVS 107
           KV ++TGAS GIG  +A   A  GA +A+  R E++  E  +  + +G  +   + ADVS
Sbjct: 1   KVALVTGASRGIGRAIALRLAAEGAKVAVTDRSEEAAAETVEEIKALGG-NAAALEADVS 59

Query: 108 KVDDCRSLVEETMNHFGRLDHLVNNAGISSVALFEDIVNIT--DFKQIMNINFWGSVYTT 165
             +   +LVE+    FG +D LVNNAGI+   L    + ++  D+  ++N+N  G    T
Sbjct: 60  DREAVEALVEKVEAEFGPVDILVNNAGITRDNLL---MRMSEEDWDAVINVNLTGVFNVT 116

Query: 166 RFAVPH-LRYTKGKIVVLSSAASWLTAPRMSFYNASKAALVLFFETLRVELGS-DVGVTI 223
           +  +   ++   G+I+ +SS    +  P  + Y ASKA ++ F ++L  EL S  + V  
Sbjct: 117 QAVIRAMIKRRSGRIINISSVVGLIGNPGQANYAASKAGVIGFTKSLAKELASRGITVNA 176

Query: 224 VTPGFIESELT 234
           V PGFI++++T
Sbjct: 177 VAPGFIDTDMT 187

This subgroup includes the Escherichai coli K12 BKR, FabG. BKR catalyzes the NADPH-dependent reduction of ACP in the first reductive step of de novo fatty acid synthesis (FAS). FAS consists of four elongation steps, which are repeated to extend the fatty acid chain through the addition of two-carbo units from malonyl acyl-carrier protein (ACP): condensation, reduction, dehydration, and a final reduction. Type II FAS, typical of plants and many bacteria, maintains these activities on discrete polypeptides, while type I FAS utilizes one or two multifunctional polypeptides. BKR resembles enoyl reductase, which catalyzes the second reduction step in FAS. SDRs are a functionally diverse family of oxidoreductases that have a single domain with structurally conserved Rossmann fold (alpha/beta folding pattern with a central beta-sheet) NAD(P)(H) binding region and a structurally diverse C-terminal region. Classical SDRs are typically about 250 residues long, while extended SDRS are approximately 350 residues. Sequence identity between different SDR enzymes are typically in the 15-30% range, but the enzymes share the Rossmann fold NAD binding motif and characteristic NAD-binding and catalytic sequence patterns. These enzymes have a 3-glycine N-terminal NAD(P)(H) binding pattern: TGxxxGxG in classical SDRs. Extended SDRs have additional elements in the C-terminal region, and typically have a TGXXGXXG cofactor binding motif. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid synthase have a GGXGXXG NAD(P) binding motif and an altered active site motif (YXXXN). Fungal type type ketoacyl reductases have a TGXXXGX(1-2)G NAD(P)-binding motif. Some atypical SDRs have lost catalytic activity and/or have an unusual NAD(P) binding motif and missing or unusual active site residues. Reactions catalyzed within the SDR family include isomerization, decarboxylation, epimerization, C=N bond reduction, dehydratase activity, dehalogenation, Enoyl-CoA reduction, and carbonyl-alcohol oxidoreduction. A critical catalytic Tyr residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase (15-PGDH) numbering), is often found in a conserved YXXXK pattern. In addition to the Tyr and Lys, there is often an upstream Ser (Ser-138, 15-PGDH numbering) and/or an Asn (Asn-107, 15-PGDH numbering) or additional Ser, contributing to the active site. Substrates for these enzymes include sugars, steroids, alcohols, and aromatic compounds. The standard reaction mechanism is a proton relay involving the conserved Tyr-151 and Lys-155, and well as Asn-111 (or Ser). Some SDR family members, including 17 beta-hydroxysteroid dehydrogenase contain an additional helix-turn-helix motif that is not generally found among SDRs. Length = 240

>gnl|CDD|237100 PRK12429, PRK12429, 3-hydroxybutyrate dehydrogenase; Provisional

 Score =  126 bits (318), Expect = 2e-35
 Identities = 54/197 (27%), Positives = 106/197 (53%), Gaps = 6/197 (3%)

Query: 45  VSGKVVIITGASSGIGEHLAYEYARRGACLALCARREKSLEEVADTAREIGSPDVITIRA 104
           + GKV ++TGA+SGIG  +A   A+ GA + +    +++    A+  ++ G    I +  
Sbjct: 2   LKGKVALVTGAASGIGLEIALALAKEGAKVVIADLNDEAAAAAAEALQKAG-GKAIGVAM 60

Query: 105 DVSKVDDCRSLVEETMNHFGRLDHLVNNAGISSVALFEDIVNITDFKQIMNINFWGSVYT 164
           DV+  +   + ++  +  FG +D LVNNAGI  VA  ED      +K+++ I   G+  T
Sbjct: 61  DVTDEEAINAGIDYAVETFGGVDILVNNAGIQHVAPIEDF-PTEKWKKMIAIMLDGAFLT 119

Query: 165 TRFAVPHLRYTK-GKIVVLSSAASWLTAPRMSFYNASKAALVLFFETLRVELGSDVGVT- 222
           T+ A+P ++    G+I+ ++S    + +   + Y ++K  L+   + + +E G+  GVT 
Sbjct: 120 TKAALPIMKAQGGGRIINMASVHGLVGSAGKAAYVSAKHGLIGLTKVVALE-GATHGVTV 178

Query: 223 -IVTPGFIESELTQGKF 238
             + PG++++ L + + 
Sbjct: 179 NAICPGYVDTPLVRKQI 195

Length = 258

>gnl|CDD|235910 PRK07024, PRK07024, short chain dehydrogenase; Provisional

 Score =  126 bits (318), Expect = 2e-35
 Identities = 70/189 (37%), Positives = 102/189 (53%), Gaps = 4/189 (2%)

Query: 50  VIITGASSGIGEHLAYEYARRGACLALCARREKSLEEVADTAREIGSPDVITIRADVSKV 109
           V ITGASSGIG+ LA EYAR+GA L L ARR  +L+  A       +  V    ADV   
Sbjct: 5   VFITGASSGIGQALAREYARQGATLGLVARRTDALQAFAARLP--KAARVSVYAADVRDA 62

Query: 110 DDCRSLVEETMNHFGRLDHLVNNAGISSVALFEDIVNITDFKQIMNINFWGSVYT-TRFA 168
           D   +   + +   G  D ++ NAGIS   L E+  ++  F+++M+ N++G V T   F 
Sbjct: 63  DALAAAAADFIAAHGLPDVVIANAGISVGTLTEEREDLAVFREVMDTNYFGMVATFQPFI 122

Query: 169 VPHLRYTKGKIVVLSSAASWLTAPRMSFYNASKAALVLFFETLRVEL-GSDVGVTIVTPG 227
            P     +G +V ++S A     P    Y+ASKAA + + E+LRVEL  + V V  + PG
Sbjct: 123 APMRAARRGTLVGIASVAGVRGLPGAGAYSASKAAAIKYLESLRVELRPAGVRVVTIAPG 182

Query: 228 FIESELTQG 236
           +I + +T  
Sbjct: 183 YIRTPMTAH 191

Length = 257

>gnl|CDD|235990 PRK07326, PRK07326, short chain dehydrogenase; Provisional

 Score =  124 bits (314), Expect = 5e-35
 Identities = 63/183 (34%), Positives = 95/183 (51%), Gaps = 4/183 (2%)

Query: 46  SGKVVIITGASSGIGEHLAYEYARRGACLALCARREKSLEEVADTAREIGSPDVITIRAD 105
            GKV +ITG S GIG  +A      G  +A+ AR +K LEE A      G  +V+ + AD
Sbjct: 5   KGKVALITGGSKGIGFAIAEALLAEGYKVAITARDQKELEEAAAELNNKG--NVLGLAAD 62

Query: 106 VSKVDDCRSLVEETMNHFGRLDHLVNNAGISSVALFEDIVNITDFKQIMNINFWGSVYTT 165
           V    D +  V+  +  FG LD L+ NAG+   A  E++    +++ +++ N  G+ YT 
Sbjct: 63  VRDEADVQRAVDAIVAAFGGLDVLIANAGVGHFAPVEEL-TPEEWRLVIDTNLTGAFYTI 121

Query: 166 RFAVPHLRYTKGKIVVLSSAASWLTAPRMSFYNASKAALVLFFETLRVELGS-DVGVTIV 224
           + AVP L+   G I+ +SS A        + YNASK  LV F E   ++L    + V+ +
Sbjct: 122 KAAVPALKRGGGYIINISSLAGTNFFAGGAAYNASKFGLVGFSEAAMLDLRQYGIKVSTI 181

Query: 225 TPG 227
            PG
Sbjct: 182 MPG 184

Length = 237

>gnl|CDD|233590 TIGR01830, 3oxo_ACP_reduc, 3-oxoacyl-(acyl-carrier-protein) reductase

 Score =  124 bits (314), Expect = 7e-35
 Identities = 59/190 (31%), Positives = 102/190 (53%), Gaps = 9/190 (4%)

Query: 50  VIITGASSGIGEHLAYEYARRGACLALCARR-EKSLEEVADTAREIGSPDVITIRADVSK 108
            ++TGAS GIG  +A + A+ GA + +  R  E+  EEV +  +  G    + +  DVS 
Sbjct: 1   ALVTGASRGIGRAIALKLAKEGAKVIITYRSSEEGAEEVVEELKAYGV-KALGVVCDVSD 59

Query: 109 VDDCRSLVEETMNHFGRLDHLVNNAGISSVALFEDIVNIT--DFKQIMNINFWGSVYTTR 166
            +D +++VEE     G +D LVNNAGI+   L    + +   D+  +++ N  G    T+
Sbjct: 60  REDVKAVVEEIEEELGPIDILVNNAGITRDNLL---MRMKEEDWDAVIDTNLTGVFNLTQ 116

Query: 167 FAVPH-LRYTKGKIVVLSSAASWLTAPRMSFYNASKAALVLFFETLRVELGS-DVGVTIV 224
             +   ++   G+I+ +SS    +     + Y ASKA ++ F ++L  EL S ++ V  V
Sbjct: 117 AVLRIMIKQRSGRIINISSVVGLMGNAGQANYAASKAGVIGFTKSLAKELASRNITVNAV 176

Query: 225 TPGFIESELT 234
            PGFI++++T
Sbjct: 177 APGFIDTDMT 186

This model represents 3-oxoacyl-[ACP] reductase, also called 3-ketoacyl-acyl carrier protein reductase, an enzyme of fatty acid biosynthesis [Fatty acid and phospholipid metabolism, Biosynthesis]. Length = 239

>gnl|CDD|187627 cd05369, TER_DECR_SDR_a, Trans-2-enoyl-CoA reductase (TER) and 2,4-dienoyl-CoA reductase (DECR), atypical (a) SDR

 Score =  123 bits (311), Expect = 2e-34
 Identities = 55/191 (28%), Positives = 95/191 (49%), Gaps = 6/191 (3%)

Query: 46  SGKVVIITGASSGIGEHLAYEYARRGACLALCARREKSLEEVADTAREIGSPDVITIRAD 105
            GKV  ITG  +GIG+ +A  +A  GA +A+  R+ + LE  A+            I+ D
Sbjct: 2   KGKVAFITGGGTGIGKAIAKAFAELGASVAIAGRKPEVLEAAAEEISSATGGRAHPIQCD 61

Query: 106 VSKVDDCRSLVEETMNHFGRLDHLVNNAGISSVALFEDIVNITDFKQIMNINFWGSVYTT 165
           V   +   + V+ET+  FG++D L+NNA  + +A  E + +   FK +++I+  G+  TT
Sbjct: 62  VRDPEAVEAAVDETLKEFGKIDILINNAAGNFLAPAESL-SPNGFKTVIDIDLNGTFNTT 120

Query: 166 RFAVPHLRYTKGKIVVLSSAA--SWLTAPRMSFYNASKAALVLFFETLRVELGSDVGVTI 223
           +     L   K    +L+ +A  ++  +P      A+KA +     +L VE G   G+ +
Sbjct: 121 KAVGKRLIEAKHGGSILNISATYAYTGSPFQVHSAAAKAGVDALTRSLAVEWGPY-GIRV 179

Query: 224 --VTPGFIESE 232
             + PG I + 
Sbjct: 180 NAIAPGPIPTT 190

TTER is a peroxisomal protein with a proposed role in fatty acid elongation. Fatty acid synthesis is known to occur in the both endoplasmic reticulum and mitochondria; peroxisomal TER has been proposed as an additional fatty acid elongation system, it reduces the double bond at C-2 as the last step of elongation. This system resembles the mitochondrial system in that acetyl-CoA is used as a carbon donor. TER may also function in phytol metabolism, reducting phytenoyl-CoA to phytanoyl-CoA in peroxisomes. DECR processes double bonds in fatty acids to increase their utility in fatty acid metabolism; it reduces 2,4-dienoyl-CoA to an enoyl-CoA. DECR is active in mitochondria and peroxisomes. This subgroup has the Gly-rich NAD-binding motif of the classical SDR family, but does not display strong identity to the canonical active site tetrad, and lacks the characteristic Tyr at the usual position. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold (alpha/beta folding pattern with a central beta-sheet), an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Classical SDRs are typically about 250 residues long, while extended SDRS are approximately 350 residues. Sequence identity between different SDR enzymes are typically in the 15-30% range, but the enzymes share the Rossmann fold NAD-binding motif and characteristic NAD-binding and catalytic sequence patterns. These enzymes have a 3-glycine N-terminal NAD(P)(H)-binding pattern (typically, TGxxxGxG in classical SDRs and TGxxGxxG in extended SDRs), while substrate binding is in the C-terminal region. A critical catalytic Tyr residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase (15-PGDH) numbering), is often found in a conserved YXXXK pattern. In addition to the Tyr and Lys, there is often an upstream Ser (Ser-138, 15-PGDH numbering) and/or an Asn (Asn-107, 15-PGDH numbering) or additional Ser, contributing to the active site. Substrates for these enzymes include sugars, steroids, alcohols, and aromatic compounds. The standard reaction mechanism is a proton relay involving the conserved Tyr and Lys, as well as Asn (or Ser). Some SDR family members, including 17 beta-hydroxysteroid dehydrogenase contain an additional helix-turn-helix motif that is not generally found among SDRs. Length = 249

>gnl|CDD|237218 PRK12825, fabG, 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional

 Score =  122 bits (309), Expect = 4e-34
 Identities = 59/194 (30%), Positives = 98/194 (50%), Gaps = 9/194 (4%)

Query: 44  DVSGKVVIITGASSGIGEHLAYEYARRGACLALCARREKSLEEVADTAREIGS--PDVIT 101
            + G+V ++TGA+ G+G  +A   AR GA + +  R     E   +    + +       
Sbjct: 3   SLMGRVALVTGAARGLGRAIALRLARAGADVVVHYRS--DEEAAEELVEAVEALGRRAQA 60

Query: 102 IRADVSKVDDCRSLVEETMNHFGRLDHLVNNAGISSVALFEDIVNITDFKQIMNINFWGS 161
           ++ADV+      + V   +  FGR+D LVNNAGI       D+ +  ++ +++++N  G 
Sbjct: 61  VQADVTDKAALEAAVAAAVERFGRIDILVNNAGIFEDKPLADM-SDDEWDEVIDVNLSGV 119

Query: 162 VYTTRFAVPHLRYTK-GKIVVLSSAASWLTAPRMSFYNASKAALVLFFETLRVELGSDVG 220
            +  R  VP +R  + G+IV +SS A     P  S Y A+KA LV   + L  EL    G
Sbjct: 120 FHLLRAVVPPMRKQRGGRIVNISSVAGLPGWPGRSNYAAAKAGLVGLTKALARELAE-YG 178

Query: 221 VTI--VTPGFIESE 232
           +T+  V PG I+++
Sbjct: 179 ITVNMVAPGDIDTD 192

Length = 249

>gnl|CDD|211705 TIGR01963, PHB_DH, 3-hydroxybutyrate dehydrogenase

 Score =  122 bits (308), Expect = 6e-34
 Identities = 63/195 (32%), Positives = 106/195 (54%), Gaps = 6/195 (3%)

Query: 47  GKVVIITGASSGIGEHLAYEYARRGACLALCARREKSLEEVADTAREIGSPDVITIRADV 106
           GK  ++TGA+SGIG  +A   A  GA + +    E+  E  A  A + G   VI + ADV
Sbjct: 1   GKTALVTGAASGIGLAIARALAAAGANVVVNDFGEEGAEAAAKVAGDAGG-SVIYLPADV 59

Query: 107 SKVDDCRSLVEETMNHFGRLDHLVNNAGISSVALFEDIVNITDFKQIMNINFWGSVYTTR 166
           +K D+   ++      FG LD LVNNAGI  VA  E+     D+ +I+ +    + +T R
Sbjct: 60  TKEDEIADMIAAAAAEFGGLDILVNNAGIQHVAPIEEF-PPEDWDRIIAVMLTSAFHTIR 118

Query: 167 FAVPHLRYTK-GKIVVLSSAASWLTAPRMSFYNASKAALVLFFETLRVELGSDVGVTI-- 223
            A+PH++    G+I+ ++SA   + +P  S Y A+K  L+   + L +E  ++ G+T+  
Sbjct: 119 AALPHMKKQGWGRIINIASAHGLVASPFKSAYVAAKHGLIGLTKVLALE-VAEHGITVNA 177

Query: 224 VTPGFIESELTQGKF 238
           + PG++ + L + + 
Sbjct: 178 ICPGYVRTPLVEKQI 192

This model represents a subfamily of the short chain dehydrogenases. Characterized members so far as 3-hydroxybutyrate dehydrogenases and are found in species that accumulate ester polmers called polyhydroxyalkanoic acids (PHAs) under certain conditions. Several members of the family are from species not known to accumulate PHAs, including Oceanobacillus iheyensis and Bacillus subtilis. However, polymer formation is not required for there be a role for 3-hydroxybutyrate dehydrogenase; it may be members of this family have the same function in those species. Length = 255

>gnl|CDD|235628 PRK05855, PRK05855, short chain dehydrogenase; Validated

 Score =  127 bits (321), Expect = 9e-34
 Identities = 66/197 (33%), Positives = 101/197 (51%), Gaps = 5/197 (2%)

Query: 42  SEDVSGKVVIITGASSGIGEHLAYEYARRGACLALCARREKSLEEVADTAREIGSPDVIT 101
               SGK+V++TGA SGIG   A  +AR GA +      E + E  A+  R  G      
Sbjct: 310 RGPFSGKLVVVTGAGSGIGRETALAFAREGAEVVASDIDEAAAERTAELIRAAG-AVAHA 368

Query: 102 IRADVSKVDDCRSLVEETMNHFGRLDHLVNNAGISSVALFEDIVNITDFKQIMNINFWGS 161
            R DVS  D   +  E      G  D +VNNAGI     F D  +  D+ +++++N WG 
Sbjct: 369 YRVDVSDADAMEAFAEWVRAEHGVPDIVVNNAGIGMAGGFLD-TSAEDWDRVLDVNLWGV 427

Query: 162 VYTTRFAVPHL--RYTKGKIVVLSSAASWLTAPRMSFYNASKAALVLFFETLRVELGS-D 218
           ++  R     +  R T G IV ++SAA++  +  +  Y  SKAA+++  E LR EL +  
Sbjct: 428 IHGCRLFGRQMVERGTGGHIVNVASAAAYAPSRSLPAYATSKAAVLMLSECLRAELAAAG 487

Query: 219 VGVTIVTPGFIESELTQ 235
           +GVT + PGF+++ +  
Sbjct: 488 IGVTAICPGFVDTNIVA 504

Length = 582

>gnl|CDD|237220 PRK12828, PRK12828, short chain dehydrogenase; Provisional

 Score =  121 bits (305), Expect = 9e-34
 Identities = 61/196 (31%), Positives = 88/196 (44%), Gaps = 16/196 (8%)

Query: 44  DVSGKVVIITGASSGIGEHLAYEYARRGACLALCARR----EKSLEEVADTAREIGSPDV 99
            + GKVV ITG   G+G   A   A RGA +AL  R      ++L  V   A  IG    
Sbjct: 4   SLQGKVVAITGGFGGLGRATAAWLAARGARVALIGRGAAPLSQTLPGVPADALRIG---- 59

Query: 100 ITIRADVSKVDDCRSLVEETMNHFGRLDHLVNNAGISSVALFEDIVNITDFKQIMNINFW 159
                D+      R  V+E    FGRLD LVN AG        D  +   + ++  +N  
Sbjct: 60  ---GIDLVDPQAARRAVDEVNRQFGRLDALVNIAGAFVWGTIADG-DADTWDRMYGVNVK 115

Query: 160 GSVYTTRFAVPHL-RYTKGKIVVLSSAASWLTAPRMSFYNASKAALVLFFETLRVELGSD 218
            ++  ++ A+P L     G+IV + + A+    P M  Y A+KA +    E L  EL  D
Sbjct: 116 TTLNASKAALPALTASGGGRIVNIGAGAALKAGPGMGAYAAAKAGVARLTEALAAELL-D 174

Query: 219 VGVTI--VTPGFIESE 232
            G+T+  V P  I++ 
Sbjct: 175 RGITVNAVLPSIIDTP 190

Length = 239

>gnl|CDD|183832 PRK12935, PRK12935, acetoacetyl-CoA reductase; Provisional

 Score =  121 bits (304), Expect = 1e-33
 Identities = 67/193 (34%), Positives = 115/193 (59%), Gaps = 7/193 (3%)

Query: 45  VSGKVVIITGASSGIGEHLAYEYARRGACLALCARREKSLEEVADTAREIGSP--DVITI 102
           ++GKV I+TG + GIG+ +    A+ GA + +      S E   +   E+G    DV  +
Sbjct: 4   LNGKVAIVTGGAKGIGKAITVALAQEGAKVVI--NYNSSKEAAENLVNELGKEGHDVYAV 61

Query: 103 RADVSKVDDCRSLVEETMNHFGRLDHLVNNAGISSVALFEDIVNITDFKQIMNINFWGSV 162
           +ADVSKV+D   LVEE +NHFG++D LVNNAGI+    F+ + N  D+++++++N     
Sbjct: 62  QADVSKVEDANRLVEEAVNHFGKVDILVNNAGITRDRTFKKL-NREDWERVIDVNLSSVF 120

Query: 163 YTTRFAVPHLRYTK-GKIVVLSSAASWLTAPRMSFYNASKAALVLFFETLRVELG-SDVG 220
            TT   +P++   + G+I+ +SS          + Y+A+KA ++ F ++L +EL  ++V 
Sbjct: 121 NTTSAVLPYITEAEEGRIISISSIIGQAGGFGQTNYSAAKAGMLGFTKSLALELAKTNVT 180

Query: 221 VTIVTPGFIESEL 233
           V  + PGFI++E+
Sbjct: 181 VNAICPGFIDTEM 193

Length = 247

>gnl|CDD|187602 cd05344, BKR_like_SDR_like, putative beta-ketoacyl acyl carrier protein [ACP] reductase (BKR)-like, SDR

 Score =  120 bits (302), Expect = 4e-33
 Identities = 67/189 (35%), Positives = 103/189 (54%), Gaps = 6/189 (3%)

Query: 47  GKVVIITGASSGIGEHLAYEYARRGACLALCARREKSLEEVADTAREIGSPDVITIRADV 106
           GKV ++T ASSGIG  +A   AR GA +A+CAR  ++LE  A   R  G   V+ + AD+
Sbjct: 1   GKVALVTAASSGIGLAIARALAREGARVAICARNRENLERAASELRAGG-AGVLAVVADL 59

Query: 107 SKVDDCRSLVEETMNHFGRLDHLVNNAGISSVALFEDIVNITDFKQIMNINFWGSVYTTR 166
           +  +D   LVE+  + FGR+D LVNNAG      F ++    D+ +  ++     +   R
Sbjct: 60  TDPEDIDRLVEKAGDAFGRVDILVNNAGGPPPGPFAEL-TDEDWLEAFDLKLLSVIRIVR 118

Query: 167 FAVPHLRYTK-GKIVVLSSAASWLTAPRMSFYNASKAALVLFFETLRVELGSDVGVTI-- 223
             +P ++    G+IV +SS       P +   N ++A L+   +TL  EL  D GVT+  
Sbjct: 119 AVLPGMKERGWGRIVNISSLTVKEPEPNLVLSNVARAGLIGLVKTLSRELAPD-GVTVNS 177

Query: 224 VTPGFIESE 232
           V PG+I++E
Sbjct: 178 VLPGYIDTE 186

This subgroup resembles the SDR family, but does not have a perfect match to the NAD-binding motif or the catalytic tetrad characteristic of the SDRs. It includes the SDRs, Q9HYA2 from Pseudomonas aeruginosa PAO1 and APE0912 from Aeropyrum pernix K1. BKR catalyzes the NADPH-dependent reduction of ACP in the first reductive step of de novo fatty acid synthesis (FAS). FAS consists of four elongation steps, which are repeated to extend the fatty acid chain through the addition of two-carbo units from malonyl acyl-carrier protein (ACP): condensation, reduction, dehydration, and a final reduction. Type II FAS, typical of plants and many bacteria, maintains these activities on discrete polypeptides, while type I FAS utilizes one or two multifunctional polypeptides. BKR resembles enoyl reductase, which catalyzes the second reduction step in FAS. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold (alpha/beta folding pattern with a central beta-sheet), an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Classical SDRs are typically about 250 residues long, while extended SDRS are approximately 350 residues. Sequence identity between different SDR enzymes are typically in the 15-30% range, but the enzymes share the Rossmann fold NAD-binding motif and characteristic NAD-binding and catalytic sequence patterns. These enzymes have a 3-glycine N-terminal NAD(P)(H)-binding pattern (typically, TGxxxGxG in classical SDRs and TGxxGxxG in extended SDRs), while substrate binding is in the C-terminal region. A critical catalytic Tyr residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase (15-PGDH) numbering), is often found in a conserved YXXXK pattern. In addition to the Tyr and Lys, there is often an upstream Ser (Ser-138, 15-PGDH numbering) and/or an Asn (Asn-107, 15-PGDH numbering) or additional Ser, contributing to the active site. Substrates for these enzymes include sugars, steroids, alcohols, and aromatic compounds. The standard reaction mechanism is a proton relay involving the conserved Tyr and Lys, as well as Asn (or Ser). Some SDR family members, including 17 beta-hydroxysteroid dehydrogenase contain an additional helix-turn-helix motif that is not generally found among SDRs. Length = 253

>gnl|CDD|181159 PRK07890, PRK07890, short chain dehydrogenase; Provisional

 Score =  119 bits (301), Expect = 6e-33
 Identities = 63/197 (31%), Positives = 101/197 (51%), Gaps = 8/197 (4%)

Query: 46  SGKVVIITGASSGIGEHLAYEYARRGACLALCARREKSLEEVADTAREIGSPDVITIRAD 105
            GKVV+++G   G+G  LA   AR GA + L AR  + L+EVA    ++G    + +  D
Sbjct: 4   KGKVVVVSGVGPGLGRTLAVRAARAGADVVLAARTAERLDEVAAEIDDLGR-RALAVPTD 62

Query: 106 VSKVDDCRSLVEETMNHFGRLDHLVNNAGISSVALFEDIVNITDFKQI---MNINFWGSV 162
           ++  D C +LV   +  FGR+D LVNNA    V   + + +  DF      + +N  G++
Sbjct: 63  ITDEDQCANLVALALERFGRVDALVNNA--FRVPSMKPLAD-ADFAHWRAVIELNVLGTL 119

Query: 163 YTTRFAVPHLRYTKGKIVVLSSAASWLTAPRMSFYNASKAALVLFFETLRVELGSD-VGV 221
             T+   P L  + G IV+++S     + P+   Y  +K AL+   ++L  ELG   + V
Sbjct: 120 RLTQAFTPALAESGGSIVMINSMVLRHSQPKYGAYKMAKGALLAASQSLATELGPQGIRV 179

Query: 222 TIVTPGFIESELTQGKF 238
             V PG+I  +  +G F
Sbjct: 180 NSVAPGYIWGDPLKGYF 196

Length = 258

>gnl|CDD|187600 cd05341, 3beta-17beta-HSD_like_SDR_c, 3beta17beta hydroxysteroid dehydrogenase-like, classical (c) SDRs

 Score =  119 bits (299), Expect = 9e-33
 Identities = 58/197 (29%), Positives = 94/197 (47%), Gaps = 9/197 (4%)

Query: 44  DVSGKVVIITGASSGIGEHLAYEYARRGACLALCARREKSLEEVADTAREIGSPDVITIR 103
            + GKV I+TG + G+G   A      GA + L    +   EE    A E+G        
Sbjct: 2   RLKGKVAIVTGGARGLGLAHARLLVAEGAKVVLSDILD---EEGQAAAAELGD-AARFFH 57

Query: 104 ADVSKVDDCRSLVEETMNHFGRLDHLVNNAGISSVALFEDIVNITDFKQIMNINFWGSVY 163
            DV+  D   ++V+     FGRLD LVNNAGI +    E    + +++++++IN  G   
Sbjct: 58  LDVTDEDGWTAVVDTAREAFGRLDVLVNNAGILTGGTVET-TTLEEWRRLLDINLTGVFL 116

Query: 164 TTRFAVPHLRYT-KGKIVVLSSAASWLTAPRMSFYNASKAALVLFFETLRVELG---SDV 219
            TR  +P ++    G I+ +SS    +  P ++ YNASK A+    ++  +E       +
Sbjct: 117 GTRAVIPPMKEAGGGSIINMSSIEGLVGDPALAAYNASKGAVRGLTKSAALECATQGYGI 176

Query: 220 GVTIVTPGFIESELTQG 236
            V  V PG+I + +T  
Sbjct: 177 RVNSVHPGYIYTPMTDE 193

This subgroup includes members identified as 3beta17beta hydroxysteroid dehydrogenase, 20beta hydroxysteroid dehydrogenase, and R-alcohol dehydrogenase. These proteins exhibit the canonical active site tetrad and glycine rich NAD(P)-binding motif of the classical SDRs. 17beta-dehydrogenases are a group of isozymes that catalyze activation and inactivation of estrogen and androgens, and include members of the SDR family. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold (alpha/beta folding pattern with a central beta-sheet), an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Classical SDRs are typically about 250 residues long, while extended SDRS are approximately 350 residues. Sequence identity between different SDR enzymes are typically in the 15-30% range, but the enzymes share the Rossmann fold NAD-binding motif and characteristic NAD-binding and catalytic sequence patterns. These enzymes have a 3-glycine N-terminal NAD(P)(H)-binding pattern (typically, TGxxxGxG in classical SDRs and TGxxGxxG in extended SDRs), while substrate binding is in the C-terminal region. A critical catalytic Tyr residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase (15-PGDH) numbering), is often found in a conserved YXXXK pattern. In addition to the Tyr and Lys, there is often an upstream Ser (Ser-138, 15-PGDH numbering) and/or an Asn (Asn-107, 15-PGDH numbering) or additional Ser, contributing to the active site. Substrates for these enzymes include sugars, steroids, alcohols, and aromatic compounds. The standard reaction mechanism is a proton relay involving the conserved Tyr and Lys, as well as Asn (or Ser). Some SDR family members, including 17 beta-hydroxysteroid dehydrogenase contain an additional helix-turn-helix motif that is not generally found among SDRs. Length = 247

>gnl|CDD|180723 PRK06841, PRK06841, short chain dehydrogenase; Provisional

 Score =  119 bits (300), Expect = 1e-32
 Identities = 66/192 (34%), Positives = 105/192 (54%), Gaps = 7/192 (3%)

Query: 44  DVSGKVVIITGASSGIGEHLAYEYARRGACLALCARREKSLEEVADTAREIGSPDVITIR 103
           D+SGKV ++TG +SGIG  +A  +A +GA +AL  R E    +VA+ A ++   +   + 
Sbjct: 12  DLSGKVAVVTGGASGIGHAIAELFAAKGARVALLDRSE----DVAEVAAQLLGGNAKGLV 67

Query: 104 ADVSKVDDCRSLVEETMNHFGRLDHLVNNAGISSVALFEDIVNITDFKQIMNINFWGSVY 163
            DVS      + V   ++ FGR+D LVN+AG++ +A  ED V+  D+ + ++IN  GS  
Sbjct: 68  CDVSDSQSVEAAVAAVISAFGRIDILVNSAGVALLAPAED-VSEEDWDKTIDINLKGSFL 126

Query: 164 TTRFAVPHLRYT-KGKIVVLSSAASWLTAPRMSFYNASKAALVLFFETLRVELGS-DVGV 221
             +    H+     GKIV L+S A  +   R   Y ASKA +V   + L +E G   + V
Sbjct: 127 MAQAVGRHMIAAGGGKIVNLASQAGVVALERHVAYCASKAGVVGMTKVLALEWGPYGITV 186

Query: 222 TIVTPGFIESEL 233
             ++P  + +EL
Sbjct: 187 NAISPTVVLTEL 198

Length = 255

>gnl|CDD|235713 PRK06139, PRK06139, short chain dehydrogenase; Provisional

 Score =  120 bits (304), Expect = 1e-32
 Identities = 73/201 (36%), Positives = 109/201 (54%), Gaps = 6/201 (2%)

Query: 47  GKVVIITGASSGIGEHLAYEYARRGACLALCARREKSLEEVADTAREIGSPDVITIRADV 106
           G VV+ITGASSGIG+  A  +ARRGA L L AR E++L+ VA+  R +G+ +V+ +  DV
Sbjct: 7   GAVVVITGASSGIGQATAEAFARRGARLVLAARDEEALQAVAEECRALGA-EVLVVPTDV 65

Query: 107 SKVDDCRSLVEETMNHFGRLDHLVNNAGISSVALFEDIVNITDFKQIMNINFWGSVYTTR 166
           +  D  ++L  +  +  GR+D  VNN G+ +V  FE+   I   +Q++  N  G +    
Sbjct: 66  TDADQVKALATQAASFGGRIDVWVNNVGVGAVGRFEE-TPIEAHEQVIQTNLIGYMRDAH 124

Query: 167 FAVPHLRYTK-GKIVVLSSAASWLTAPRMSFYNASKAALVLFFETLRVELGS--DVGVTI 223
            A+P  +    G  + + S   +   P  + Y+ASK  L  F E LR EL    D+ V  
Sbjct: 125 AALPIFKKQGHGIFINMISLGGFAAQPYAAAYSASKFGLRGFSEALRGELADHPDIHVCD 184

Query: 224 VTPGFIESE-LTQGKFLTGRR 243
           V P F+++     G   TGRR
Sbjct: 185 VYPAFMDTPGFRHGANYTGRR 205

Length = 330

>gnl|CDD|236074 PRK07666, fabG, 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional

 Score =  118 bits (298), Expect = 1e-32
 Identities = 64/200 (32%), Positives = 107/200 (53%), Gaps = 4/200 (2%)

Query: 43  EDVSGKVVIITGASSGIGEHLAYEYARRGACLALCARREKSLEEVADTAREIGSPDVITI 102
           + + GK  +ITGA  GIG  +A   A+ G  + L AR E++L+ VA+     G   V+  
Sbjct: 3   QSLQGKNALITGAGRGIGRAVAIALAKEGVNVGLLARTEENLKAVAEEVEAYGV-KVVIA 61

Query: 103 RADVSKVDDCRSLVEETMNHFGRLDHLVNNAGISSVALFEDIVNITDFKQIMNINFWGSV 162
            ADVS  ++  + +E+  N  G +D L+NNAGIS    F + ++  ++++I+ +N  G  
Sbjct: 62  TADVSDYEEVTAAIEQLKNELGSIDILINNAGISKFGKFLE-LDPAEWEKIIQVNLMGVY 120

Query: 163 YTTRFAVPHL-RYTKGKIVVLSSAASWLTAPRMSFYNASKAALVLFFETLRVEL-GSDVG 220
           Y TR  +P +     G I+ +SS A    A   S Y+ASK  ++   E+L  E+   ++ 
Sbjct: 121 YATRAVLPSMIERQSGDIINISSTAGQKGAAVTSAYSASKFGVLGLTESLMQEVRKHNIR 180

Query: 221 VTIVTPGFIESELTQGKFLT 240
           VT +TP  + +++     LT
Sbjct: 181 VTALTPSTVATDMAVDLGLT 200

Length = 239

>gnl|CDD|180440 PRK06172, PRK06172, short chain dehydrogenase; Provisional

 Score =  118 bits (297), Expect = 2e-32
 Identities = 64/196 (32%), Positives = 101/196 (51%), Gaps = 7/196 (3%)

Query: 42  SEDVSGKVVIITGASSGIGEHLAYEYARRGACLALCARREKSLEEVADTAREIGSPDVIT 101
           S   SGKV ++TG ++GIG   A  +AR GA + +  R     EE     RE G  + + 
Sbjct: 2   SMTFSGKVALVTGGAAGIGRATALAFAREGAKVVVADRDAAGGEETVALIREAGG-EALF 60

Query: 102 IRADVSKVDDCRSLVEETMNHFGRLDHLVNNAGISSV--ALFEDIVNITDFKQIMNINFW 159
           +  DV++  + ++LVE+T+  +GRLD+  NNAGI      L E   +  +F  IM +N  
Sbjct: 61  VACDVTRDAEVKALVEQTIAAYGRLDYAFNNAGIEIEQGRLAEG--SEAEFDAIMGVNVK 118

Query: 160 GSVYTTRFAVPH-LRYTKGKIVVLSSAASWLTAPRMSFYNASKAALVLFFETLRVELG-S 217
           G     ++ +P  L    G IV  +S A    AP+MS Y ASK A++   ++  +E    
Sbjct: 119 GVWLCMKYQIPLMLAQGGGAIVNTASVAGLGAAPKMSIYAASKHAVIGLTKSAAIEYAKK 178

Query: 218 DVGVTIVTPGFIESEL 233
            + V  V P  I++++
Sbjct: 179 GIRVNAVCPAVIDTDM 194

Length = 253

>gnl|CDD|215720 pfam00106, adh_short, short chain dehydrogenase

 Score =  114 bits (289), Expect = 5e-32
 Identities = 47/171 (27%), Positives = 73/171 (42%), Gaps = 8/171 (4%)

Query: 48  KVVIITGASSGIGEHLAYEYARRGA-CLALCARREKSLEEVADTAREIGSP--DVITIRA 104
             V+ITG + G+G  LA   A  GA  L L +RR  +    A+   E+ +   +V     
Sbjct: 1   GTVLITGGTGGLGLALARWLAAEGARHLVLVSRRGPA-PGAAELVAELEALGAEVTVAAC 59

Query: 105 DVSKVDDCRSLVEETMNHFGRLDHLVNNAGISSVALFEDIVNITDFKQIMNINFWGSVYT 164
           DV+  D   +L+       G LD +V+NAG+      E++     F++++     G+   
Sbjct: 60  DVADRDALAALLAALPAALGPLDGVVHNAGVLDDGPLEEL-TPERFERVLAPKVTGAWNL 118

Query: 165 TRFAVPHLRYTKGKIVVLSSAASWLTAPRMSFYNASKAALVLFFETLRVEL 215
                       G  V+ SS A  L +P  + Y A+ AAL    E  R E 
Sbjct: 119 HELTRDL---DLGAFVLFSSVAGVLGSPGQANYAAANAALDALAEHRRAEG 166

This family contains a wide variety of dehydrogenases. Length = 167

>gnl|CDD|187617 cd05359, ChcA_like_SDR_c, 1-cyclohexenylcarbonyl_coenzyme A_reductase (ChcA)_like, classical (c) SDRs

 Score =  116 bits (293), Expect = 8e-32
 Identities = 62/192 (32%), Positives = 89/192 (46%), Gaps = 11/192 (5%)

Query: 50  VIITGASSGIGEHLAYEYARRGACLALCARREKSLEEVADTAREIGSP--DVITIRADVS 107
            ++TG S GIG+ +A   A RGA + +  R  KS +  A+ A EI       + +RADVS
Sbjct: 1   ALVTGGSRGIGKAIALRLAERGADVVINYR--KSKDAAAEVAAEIEELGGKAVVVRADVS 58

Query: 108 KVDDCRSLVEETMNHFGRLDHLVNNAGISSVALFEDIVNIT--DFKQIMNINFWGSVYTT 165
           +  D   +       FGRLD LV+NA       F  +  +T   +   MN N    V+  
Sbjct: 59  QPQDVEEMFAAVKERFGRLDVLVSNAAAG---AFRPLSELTPAHWDAKMNTNLKALVHCA 115

Query: 166 RFAVPHLRYTK-GKIVVLSSAASWLTAPRMSFYNASKAALVLFFETLRVELGSD-VGVTI 223
           + A   +R    G+IV +SS  S    P       +KAAL      L VELG   + V  
Sbjct: 116 QQAAKLMRERGGGRIVAISSLGSIRALPNYLAVGTAKAALEALVRYLAVELGPRGIRVNA 175

Query: 224 VTPGFIESELTQ 235
           V+PG I+++   
Sbjct: 176 VSPGVIDTDALA 187

This subgroup contains classical SDR proteins, including members identified as 1-cyclohexenylcarbonyl coenzyme A reductase. ChcA of Streptomyces collinus is implicated in the final reduction step of shikimic acid to ansatrienin. ChcA shows sequence similarity to the SDR family of NAD-binding proteins, but it lacks the conserved Tyr of the characteristic catalytic site. This subgroup also contains the NADH-dependent enoyl-[acyl-carrier-protein(ACP)] reductase FabL from Bacillus subtilis. This enzyme participates in bacterial fatty acid synthesis, in type II fatty-acid synthases and catalyzes the last step in each elongation cycle. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold (alpha/beta folding pattern with a central beta-sheet), an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Classical SDRs are typically about 250 residues long, while extended SDRS are approximately 350 residues. Sequence identity between different SDR enzymes are typically in the 15-30% range, but the enzymes share the Rossmann fold NAD-binding motif and characteristic NAD-binding and catalytic sequence patterns. These enzymes have a 3-glycine N-terminal NAD(P)(H)-binding pattern (typically, TGxxxGxG in classical SDRs and TGxxGxxG in extended SDRs), while substrate binding is in the C-terminal region. A critical catalytic Tyr residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase (15-PGDH) numbering), is often found in a conserved YXXXK pattern. In addition to the Tyr and Lys, there is often an upstream Ser (Ser-138, 15-PGDH numbering) and/or an Asn (Asn-107, 15-PGDH numbering) or additional Ser, contributing to the active site. Substrates for these enzymes include sugars, steroids, alcohols, and aromatic compounds. The standard reaction mechanism is a proton relay involving the conserved Tyr and Lys, as well as Asn (or Ser). Some SDR family members, including 17 beta-hydroxysteroid dehydrogenase contain an additional helix-turn-helix motif that is not generally found among SDRs. Length = 242

>gnl|CDD|235712 PRK06138, PRK06138, short chain dehydrogenase; Provisional

 Score =  114 bits (287), Expect = 7e-31
 Identities = 55/190 (28%), Positives = 89/190 (46%), Gaps = 5/190 (2%)

Query: 44  DVSGKVVIITGASSGIGEHLAYEYARRGACLALCARREKSLEEVADTAREIGSPDVITIR 103
            ++G+V I+TGA SGIG   A  +AR GA + +  R  ++ E VA      G       +
Sbjct: 2   RLAGRVAIVTGAGSGIGRATAKLFAREGARVVVADRDAEAAERVAAAIAAGG--RAFARQ 59

Query: 104 ADVSKVDDCRSLVEETMNHFGRLDHLVNNAGISSVALFEDIVNITDFKQIMNINFWGSVY 163
            DV   +   +LV+     +GRLD LVNNAG           +  D+  +M +N  G   
Sbjct: 60  GDVGSAEAVEALVDFVAARWGRLDVLVNNAGFGCGGTVVTT-DEADWDAVMRVNVGGVFL 118

Query: 164 TTRFAVPHLRYTK-GKIVVLSSAASWLTAPRMSFYNASKAALVLFFETLRVELGSD-VGV 221
             ++A+P ++    G IV  +S  +       + Y ASK A+      + ++  +D + V
Sbjct: 119 WAKYAIPIMQRQGGGSIVNTASQLALAGGRGRAAYVASKGAIASLTRAMALDHATDGIRV 178

Query: 222 TIVTPGFIES 231
             V PG I++
Sbjct: 179 NAVAPGTIDT 188

Length = 252

>gnl|CDD|181295 PRK08213, PRK08213, gluconate 5-dehydrogenase; Provisional

 Score =  114 bits (287), Expect = 9e-31
 Identities = 66/200 (33%), Positives = 101/200 (50%), Gaps = 9/200 (4%)

Query: 44  DVSGKVVIITGASSGIGEHLAYEYARRGACLALCARREKSLEEVADTAREIGSPDVITIR 103
           D+SGK  ++TG S G+G  +A      GA + L AR+ + LEE A     +G  D + I 
Sbjct: 9   DLSGKTALVTGGSRGLGLQIAEALGEAGARVVLSARKAEELEEAAAHLEALGI-DALWIA 67

Query: 104 ADVSKVDDCRSLVEETMNHFGRLDHLVNNAGISSVALFEDIVNITDFKQIMNINFWGSVY 163
           ADV+   D   L EET+  FG +D LVNNAG +  A  ED   +  + ++MN+N  G   
Sbjct: 68  ADVADEADIERLAEETLERFGHVDILVNNAGATWGAPAED-HPVEAWDKVMNLNVRGLFL 126

Query: 164 TTRFAVPH--LRYTKGKIVVLSSAASWL-TAPRMS---FYNASKAALVLFFETLRVELG- 216
            ++       +    G+I+ ++S A      P +     YN SK A++ F   L  E G 
Sbjct: 127 LSQAVAKRSMIPRGYGRIINVASVAGLGGNPPEVMDTIAYNTSKGAVINFTRALAAEWGP 186

Query: 217 SDVGVTIVTPGFIESELTQG 236
             + V  + PGF  +++T+G
Sbjct: 187 HGIRVNAIAPGFFPTKMTRG 206

Length = 259

>gnl|CDD|180576 PRK06463, fabG, 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional

 Score =  114 bits (286), Expect = 9e-31
 Identities = 70/195 (35%), Positives = 105/195 (53%), Gaps = 12/195 (6%)

Query: 46  SGKVVIITGASSGIGEHLAYEYARRGACLA-LCARREKSLEEVADTAREIGSPDVITIRA 104
            GKV +ITG + GIG  +A  + R GA +A L    E   +E+    RE G   V TI+ 
Sbjct: 6   KGKVALITGGTRGIGRAIAEAFLREGAKVAVLYNSAENEAKEL----REKG---VFTIKC 58

Query: 105 DVSKVDDCRSLVEETMNHFGRLDHLVNNAGISSVALFEDIVNITDFKQIMNINFWGSVYT 164
           DV   D  +   E     FGR+D LVNNAGI  +  FE+  +   + +++ IN  G++YT
Sbjct: 59  DVGNRDQVKKSKEVVEKEFGRVDVLVNNAGIMYLMPFEEF-DEEKYNKMIKINLNGAIYT 117

Query: 165 TRFAVPHLRYTK-GKIVVLSSAASWLTAPR-MSFYNASKAALVLFFETLRVELGS-DVGV 221
           T   +P L+ +K G IV ++S A   TA    +FY  +KA +++    L  ELG   + V
Sbjct: 118 TYEFLPLLKLSKNGAIVNIASNAGIGTAAEGTTFYAITKAGIIILTRRLAFELGKYGIRV 177

Query: 222 TIVTPGFIESELTQG 236
             V PG++E+++T  
Sbjct: 178 NAVAPGWVETDMTLS 192

Length = 255

>gnl|CDD|187597 cd05338, DHRS1_HSDL2-like_SDR_c, human dehydrogenase/reductase (SDR family) member 1 (DHRS1) and human hydroxysteroid dehydrogenase-like protein 2 (HSDL2), classical (c) SDRs

 Score =  114 bits (286), Expect = 9e-31
 Identities = 66/195 (33%), Positives = 94/195 (48%), Gaps = 14/195 (7%)

Query: 46  SGKVVIITGASSGIGEHLAYEYARRGACLALCARRE--------KSLE-EVADTAREIGS 96
           SGKV  +TGAS GIG  +A   A+ GA + + A+          KSL   + +TA EI +
Sbjct: 2   SGKVAFVTGASRGIGRAIALRLAKAGATVVVAAKTASEGDNGSAKSLPGTIEETAEEIEA 61

Query: 97  PDV--ITIRADVSKVDDCRSLVEETMNHFGRLDHLVNNAGISSVALFEDIVNITDFKQIM 154
                + I  DV   D  R+LVE T++ FGRLD LVNNAG   ++L ED      F  + 
Sbjct: 62  AGGQALPIVVDVRDEDQVRALVEATVDQFGRLDILVNNAGAIWLSLVEDTPAKR-FDLMQ 120

Query: 155 NINFWGSVYTTRFAVPHLRYT-KGKIVVLSSAASWLTAPRMSFYNASKAALVLFFETLRV 213
            +N  G+   ++ A+PH+    +G I+ +S   S   A     Y A KA +      L  
Sbjct: 121 RVNLRGTYLLSQAALPHMVKAGQGHILNISPPLSLRPARGDVAYAAGKAGMSRLTLGLAA 180

Query: 214 EL-GSDVGVTIVTPG 227
           EL    + V  + P 
Sbjct: 181 ELRRHGIAVNSLWPS 195

This subgroup includes human DHRS1 and human HSDL2 and related proteins. These are members of the classical SDR family, with a canonical Gly-rich NAD-binding motif and the typical YXXXK active site motif. However, the rest of the catalytic tetrad is not strongly conserved. DHRS1 mRNA has been detected in many tissues, liver, heart, skeletal muscle, kidney and pancreas; a longer transcript is predominantly expressed in the liver , a shorter one in the heart. HSDL2 may play a part in fatty acid metabolism, as it is found in peroxisomes. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold (alpha/beta folding pattern with a central beta-sheet), an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Classical SDRs are typically about 250 residues long, while extended SDRS are approximately 350 residues. Sequence identity between different SDR enzymes are typically in the 15-30% range, but the enzymes share the Rossmann fold NAD-binding motif and characteristic NAD-binding and catalytic sequence patterns. These enzymes have a 3-glycine N-terminal NAD(P)(H)-binding pattern (typically, TGxxxGxG in classical SDRs and TGxxGxxG in extended SDRs), while substrate binding is in the C-terminal region. A critical catalytic Tyr residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase (15-PGDH) numbering), is often found in a conserved YXXXK pattern. In addition to the Tyr and Lys, there is often an upstream Ser (Ser-138, 15-PGDH numbering) and/or an Asn (Asn-107, 15-PGDH numbering) or additional Ser, contributing to the active site. Substrates for these enzymes include sugars, steroids, alcohols, and aromatic compounds. The standard reaction mechanism is a proton relay involving the conserved Tyr and Lys, as well as Asn (or Ser). Some SDR family members, including 17 beta-hydroxysteroid dehydrogenase contain an additional helix-turn-helix motif that is not generally found among SDRs. Length = 246

>gnl|CDD|180462 PRK06198, PRK06198, short chain dehydrogenase; Provisional

 Score =  113 bits (286), Expect = 1e-30
 Identities = 54/168 (32%), Positives = 84/168 (50%), Gaps = 11/168 (6%)

Query: 44  DVSGKVVIITGASSGIGEHLAYEYARRGA-CLALCARREKSLEEVADTAREIGSPDVITI 102
            + GKV ++TG + G+G  +A  +A RGA  L +C R  +  E  A     +G+   + +
Sbjct: 3   RLDGKVALVTGGTQGLGAAIARAFAERGAAGLVICGRNAEKGEAQAAELEALGAK-AVFV 61

Query: 103 RADVSKVDDCRSLVEETMNHFGRLDHLVNNAGISSVALFEDIVNITD---FKQIMNINFW 159
           +AD+S V+DCR +V      FGRLD LVN AG++      D    T    F +   +N  
Sbjct: 62  QADLSDVEDCRRVVAAADEAFGRLDALVNAAGLTDRGTILD----TSPELFDRHFAVNVR 117

Query: 160 GSVYTTRFAVPHLRYTK--GKIVVLSSAASWLTAPRMSFYNASKAALV 205
              +  + A+  +R  K  G IV + S ++    P ++ Y ASK AL 
Sbjct: 118 APFFLMQEAIKLMRRRKAEGTIVNIGSMSAHGGQPFLAAYCASKGALA 165

Length = 260

>gnl|CDD|187613 cd05355, SDR_c1, classical (c) SDR, subgroup 1

 Score =  113 bits (285), Expect = 2e-30
 Identities = 65/204 (31%), Positives = 94/204 (46%), Gaps = 9/204 (4%)

Query: 42  SEDVSGKVVIITGASSGIGEHLAYEYARRGA--CLALCARREKSLEEVADTAREIGSPDV 99
           S  + GK  +ITG  SGIG  +A  +AR GA   +      E   EE      E G    
Sbjct: 21  SGKLKGKKALITGGDSGIGRAVAIAFAREGADVAINYLPEEEDDAEETKKLIEEEGR-KC 79

Query: 100 ITIRADVSKVDDCRSLVEETMNHFGRLDHLVNNAGISSVALFEDIVNITD--FKQIMNIN 157
           + I  D+     CR LV+E +  FG+LD LVNNA        E I +IT    ++    N
Sbjct: 80  LLIPGDLGDESFCRDLVKEVVKEFGKLDILVNNAAYQHPQ--ESIEDITTEQLEKTFRTN 137

Query: 158 FWGSVYTTRFAVPHLRYTKGKIVVLSSAASWLTAPRMSFYNASKAALVLFFETLRVELGS 217
            +   Y T+ A+PHL+     I+  +S  ++  +P +  Y A+K A+V F   L ++L  
Sbjct: 138 IFSMFYLTKAALPHLK-KGSSIINTTSVTAYKGSPHLLDYAATKGAIVAFTRGLSLQLAE 196

Query: 218 D-VGVTIVTPGFIESELTQGKFLT 240
             + V  V PG I + L    F  
Sbjct: 197 KGIRVNAVAPGPIWTPLIPSSFPE 220

These proteins are members of the classical SDR family, with a canonical active site tetrad and a typical Gly-rich NAD-binding motif. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold (alpha/beta folding pattern with a central beta-sheet), an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Classical SDRs are typically about 250 residues long, while extended SDRs are approximately 350 residues. Sequence identity between different SDR enzymes are typically in the 15-30% range, but the enzymes share the Rossmann fold NAD-binding motif and characteristic NAD-binding and catalytic sequence patterns. These enzymes catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase (15-PGDH) numbering). In addition to the Tyr and Lys, there is often an upstream Ser (Ser-138, 15-PGDH numbering) and/or an Asn (Asn-107, 15-PGDH numbering) contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. Extended SDRs have additional elements in the C-terminal region, and typically have a TGXXGXXG cofactor binding motif. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid synthase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type ketoacyl reductases have a TGXXXGX(1-2)G NAD(P)-binding motif. Some atypical SDRs have lost catalytic activity and/or have an unusual NAD(P)-binding motif and missing or unusual active site residues. Reactions catalyzed within the SDR family include isomerization, decarboxylation, epimerization, C=N bond reduction, dehydratase activity, dehalogenation, Enoyl-CoA reduction, and carbonyl-alcohol oxidoreduction. Length = 270

>gnl|CDD|187605 cd05347, Ga5DH-like_SDR_c, gluconate 5-dehydrogenase (Ga5DH)-like, classical (c) SDRs

 Score =  112 bits (283), Expect = 3e-30
 Identities = 56/195 (28%), Positives = 94/195 (48%), Gaps = 4/195 (2%)

Query: 44  DVSGKVVIITGASSGIGEHLAYEYARRGACLALCARREKSLEEVADTAREIGSPDVITIR 103
            + GKV ++TGAS GIG  +A   A  GA + + +R E+  EE      + G  +     
Sbjct: 2   SLKGKVALVTGASRGIGFGIASGLAEAGANIVINSRNEEKAEEAQQLIEKEGV-EATAFT 60

Query: 104 ADVSKVDDCRSLVEETMNHFGRLDHLVNNAGISSVALFEDIVNITDFKQIMNINFWGSVY 163
            DVS  +  ++ VE     FG++D LVNNAGI      E+     +++ ++++N  G  +
Sbjct: 61  CDVSDEEAIKAAVEAIEEDFGKIDILVNNAGIIRRHPAEEF-PEAEWRDVIDVNLNGVFF 119

Query: 164 TTRFAVPHLRYTK-GKIVVLSSAASWLTAPRMSFYNASKAALVLFFETLRVELGSD-VGV 221
            ++    H+     GKI+ + S  S L  P +  Y ASK  +    + L  E     + V
Sbjct: 120 VSQAVARHMIKQGHGKIINICSLLSELGGPPVPAYAASKGGVAGLTKALATEWARHGIQV 179

Query: 222 TIVTPGFIESELTQG 236
             + PG+  +E+T+ 
Sbjct: 180 NAIAPGYFATEMTEA 194

Ga5DH catalyzes the NADP-dependent conversion of carbon source D-gluconate and 5-keto-D-gluconate. This SDR subgroup has a classical Gly-rich NAD(P)-binding motif and a conserved active site tetrad pattern. However, it has been proposed that Arg104 (Streptococcus suis Ga5DH numbering), as well as an active site Ca2+, play a critical role in catalysis. In addition to Ga5DHs this subgroup contains Erwinia chrysanthemi KduD which is involved in pectin degradation, and is a putative 2,5-diketo-3-deoxygluconate dehydrogenase. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold (alpha/beta folding pattern with a central beta-sheet), an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Classical SDRs are typically about 250 residues long, while extended SDRs are approximately 350 residues. Sequence identity between different SDR enzymes are typically in the 15-30% range, but the enzymes share the Rossmann fold NAD-binding motif and characteristic NAD-binding and catalytic sequence patterns. These enzymes catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase (15-PGDH) numbering). In addition to the Tyr and Lys, there is often an upstream Ser (Ser-138, 15-PGDH numbering) and/or an Asn (Asn-107,15-PGDH numbering) contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. Extended SDRs have additional elements in the C-terminal region, and typically have a TGXXGXXG cofactor binding motif. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid synthase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type ketoacyl reductases have a TGXXXGX(1-2)G NAD(P)-binding motif. Some atypical SDRs have lost catalytic activity and/or have an unusual NAD(P)-binding motif and missing or unusual active site residues. Reactions catalyzed within the SDR family include isomerization, decarboxylation, epimerization, C=N bond reduction, dehydratase activity, dehalogenation, Enoyl-CoA reduction, and carbonyl-alcohol oxidoreduction. Length = 248

>gnl|CDD|187638 cd08933, RDH_SDR_c, retinal dehydrogenase-like, classical (c) SDR

 Score =  113 bits (283), Expect = 3e-30
 Identities = 63/194 (32%), Positives = 101/194 (52%), Gaps = 7/194 (3%)

Query: 47  GKVVIITGASSGIGEHLAYEYARRGACLALCARRE---KSLEEVADTAREIGSPDVITIR 103
            KVVI+TG S GIG  +   +   GA +  CAR E   ++LE   + A   G      + 
Sbjct: 9   DKVVIVTGGSRGIGRGIVRAFVENGAKVVFCARGEAAGQALESELNRA---GPGSCKFVP 65

Query: 104 ADVSKVDDCRSLVEETMNHFGRLDHLVNNAGISSVALFEDIVNITDFKQIMNINFWGSVY 163
            DV+K +D ++L+  T+  FGR+D LVNNAG        D  +  +F+ ++N+N      
Sbjct: 66  CDVTKEEDIKTLISVTVERFGRIDCLVNNAGWHPPHQTTDETSAQEFRDLLNLNLISYFL 125

Query: 164 TTRFAVPHLRYTKGKIVVLSSAASWLTAPRMSFYNASKAALVLFFETLRV-ELGSDVGVT 222
            +++A+PHLR ++G I+ LSS    +   + + Y A+K A+    + L V E    V V 
Sbjct: 126 ASKYALPHLRKSQGNIINLSSLVGSIGQKQAAPYVATKGAITAMTKALAVDESRYGVRVN 185

Query: 223 IVTPGFIESELTQG 236
            ++PG I + L + 
Sbjct: 186 CISPGNIWTPLWEE 199

These classical SDRs includes members identified as retinol dehydrogenases, which convert retinol to retinal, a property that overlaps with 17betaHSD activity. 17beta-dehydrogenases are a group of isozymes that catalyze activation and inactivation of estrogen and androgens, and include members of the short-chain dehydrogenases/reductase family. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold (alpha/beta folding pattern with a central beta-sheet), an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Classical SDRs are typically about 250 residues long, while extended SDRs are approximately 350 residues. Sequence identity between different SDR enzymes are typically in the 15-30% range, but the enzymes share the Rossmann fold NAD-binding motif and characteristic NAD-binding and catalytic sequence patterns. These enzymes catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase (15-PGDH) numbering). In addition to the Tyr and Lys, there is often an upstream Ser (Ser-138, 15-PGDH numbering) and/or an Asn (Asn-107, 15-PGDH numbering) contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. Extended SDRs have additional elements in the C-terminal region, and typically have a TGXXGXXG cofactor binding motif. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid synthase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type ketoacyl reductases have a TGXXXGX(1-2)G NAD(P)-binding motif. Some atypical SDRs have lost catalytic activity and/or have an unusual NAD(P)-binding motif and missing or unusual active site residues. Reactions catalyzed within the SDR family include isomerization, decarboxylation, epimerization, C=N bond reduction, dehydratase activity, dehalogenation, Enoyl-CoA reduction, and carbonyl-alcohol oxidoreduction. Length = 261

>gnl|CDD|187616 cd05358, GlcDH_SDR_c, glucose 1 dehydrogenase (GlcDH), classical (c) SDRs

 Score =  112 bits (282), Expect = 4e-30
 Identities = 63/196 (32%), Positives = 103/196 (52%), Gaps = 6/196 (3%)

Query: 47  GKVVIITGASSGIGEHLAYEYARRGACLALCARREKS-LEEVADTAREIGSPDVITIRAD 105
           GKV ++TGASSGIG+ +A   A  GA + +  R ++   EEV +  + +G    I ++AD
Sbjct: 3   GKVALVTGASSGIGKAIAIRLATAGANVVVNYRSKEDAAEEVVEEIKAVGG-KAIAVQAD 61

Query: 106 VSKVDDCRSLVEETMNHFGRLDHLVNNAGISSVALFEDIVNITDFKQIMNINFWGSVYTT 165
           VSK +D  +L +  +  FG LD LVNNAG+   A   ++  + D+ +++++N  G     
Sbjct: 62  VSKEEDVVALFQSAIKEFGTLDILVNNAGLQGDASSHEM-TLEDWNKVIDVNLTGQFLCA 120

Query: 166 RFAVPHLRYTK--GKIVVLSSAASWLTAPRMSFYNASKAALVLFFETLRVELGS-DVGVT 222
           R A+   R +K  GKI+ +SS    +  P    Y ASK  + +  +TL  E     + V 
Sbjct: 121 REAIKRFRKSKIKGKIINMSSVHEKIPWPGHVNYAASKGGVKMMTKTLAQEYAPKGIRVN 180

Query: 223 IVTPGFIESELTQGKF 238
            + PG I + +    +
Sbjct: 181 AIAPGAINTPINAEAW 196

GlcDH, is a tetrameric member of the SDR family, it catalyzes the NAD(P)-dependent oxidation of beta-D-glucose to D-glucono-delta-lactone. GlcDH has a typical NAD-binding site glycine-rich pattern as well as the canonical active site tetrad (YXXXK motif plus upstream Ser and Asn). SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold (alpha/beta folding pattern with a central beta-sheet), an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Classical SDRs are typically about 250 residues long, while extended SDRS are approximately 350 residues. Sequence identity between different SDR enzymes are typically in the 15-30% range, but the enzymes share the Rossmann fold NAD-binding motif and characteristic NAD-binding and catalytic sequence patterns. These enzymes have a 3-glycine N-terminal NAD(P)(H)-binding pattern (typically, TGxxxGxG in classical SDRs and TGxxGxxG in extended SDRs), while substrate binding is in the C-terminal region. A critical catalytic Tyr residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase (15-PGDH) numbering), is often found in a conserved YXXXK pattern. In addition to the Tyr and Lys, there is often an upstream Ser (Ser-138, 15-PGDH numbering) and/or an Asn (Asn-107, 15-PGDH numbering) or additional Ser, contributing to the active site. Substrates for these enzymes include sugars, steroids, alcohols, and aromatic compounds. The standard reaction mechanism is a proton relay involving the conserved Tyr and Lys, as well as Asn (or Ser). Some SDR family members, including 17 beta-hydroxysteroid dehydrogenase contain an additional helix-turn-helix motif that is not generally found among SDRs. Length = 253

>gnl|CDD|212493 cd08932, HetN_like_SDR_c, HetN oxidoreductase-like, classical (c) SDR

 Score =  111 bits (279), Expect = 4e-30
 Identities = 64/192 (33%), Positives = 94/192 (48%), Gaps = 10/192 (5%)

Query: 48  KVVIITGASSGIGEHLAYEYARRGACLALCARREKSLEEVADTAREIGSPDVITIRADVS 107
           KV ++TGAS GIG  +A   AR G  ++L  R  + L      A      DV  +  D  
Sbjct: 1   KVALVTGASRGIGIEIARALARDGYRVSLGLRNPEDLA-----ALSASGGDVEAVPYDAR 55

Query: 108 KVDDCRSLVEETMNHFGRLDHLVNNAGISSVALFEDIVNITDFKQIMNINFWGSVYTTRF 167
             +D R+LV+   + FGR+D LV+NAGI       +  +  + +   +IN       TR 
Sbjct: 56  DPEDARALVDALRDRFGRIDVLVHNAGIGRPTTLREG-SDAELEAHFSINVIAPAELTRA 114

Query: 168 AVPHLRY-TKGKIVVLSSAASWLTAPRMSFYNASKAALVLFFETLRVELGSDVGV--TIV 224
            +P LR    G++V L+S +        + Y+ASK AL      LR E G D GV  + V
Sbjct: 115 LLPALREAGSGRVVFLNSLSGKRVLAGNAGYSASKFALRALAHALRQE-GWDHGVRVSAV 173

Query: 225 TPGFIESELTQG 236
            PGF+++ + QG
Sbjct: 174 CPGFVDTPMAQG 185

This subgroup includes Anabaena sp. strain PCC 7120 HetN, a putative oxidoreductase involved in heterocyst differentiation, and related proteins. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold (alpha/beta folding pattern with a central beta-sheet), an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Classical SDRs are typically about 250 residues long, while extended SDRs are approximately 350 residues. Sequence identity between different SDR enzymes are typically in the 15-30% range, but the enzymes share the Rossmann fold NAD-binding motif and characteristic NAD-binding and catalytic sequence patterns. These enzymes catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase (15-PGDH) numbering). In addition to the Tyr and Lys, there is often an upstream Ser (Ser-138, 15-PGDH numbering) and/or an Asn (Asn-107, 15-PGDH numbering) contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. Extended SDRs have additional elements in the C-terminal region, and typically have a TGXXGXXG cofactor binding motif. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid synthase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type ketoacyl reductases have a TGXXXGX(1-2)G NAD(P)-binding motif. Some atypical SDRs have lost catalytic activity and/or have an unusual NAD(P)-binding motif and missing or unusual active site residues. Reactions catalyzed within the SDR family include isomerization, decarboxylation, epimerization, C=N bond reduction, dehydratase activity, dehalogenation, Enoyl-CoA reduction, and carbonyl-alcohol oxidoreduction. Length = 223

>gnl|CDD|181136 PRK07825, PRK07825, short chain dehydrogenase; Provisional

 Score =  112 bits (283), Expect = 5e-30
 Identities = 64/200 (32%), Positives = 102/200 (51%), Gaps = 8/200 (4%)

Query: 44  DVSGKVVIITGASSGIGEHLAYEYARRGACLALCARREKSLEEVADTAREIGSPDVITIR 103
           D+ GKVV ITG + GIG   A   A  GA +A+    E   +E A    E+G      + 
Sbjct: 2   DLRGKVVAITGGARGIGLATARALAALGARVAIGDLDEALAKETAA---ELGLVVGGPL- 57

Query: 104 ADVSKVDDCRSLVEETMNHFGRLDHLVNNAGISSVALFEDIVNITDFKQIMNINFWGSVY 163
            DV+      + ++      G +D LVNNAG+  V  F D  +    ++I+++N +G + 
Sbjct: 58  -DVTDPASFAAFLDAVEADLGPIDVLVNNAGVMPVGPFLDEPDAVT-RRILDVNVYGVIL 115

Query: 164 TTRFAVPHLRYT-KGKIVVLSSAASWLTAPRMSFYNASKAALVLFFETLRVEL-GSDVGV 221
            ++ A P +    +G +V ++S A  +  P M+ Y ASK A+V F +  R+EL G+ V V
Sbjct: 116 GSKLAAPRMVPRGRGHVVNVASLAGKIPVPGMATYCASKHAVVGFTDAARLELRGTGVHV 175

Query: 222 TIVTPGFIESELTQGKFLTG 241
           ++V P F+ +EL  G     
Sbjct: 176 SVVLPSFVNTELIAGTGGAK 195

Length = 273

>gnl|CDD|187648 cd08944, SDR_c12, classical (c) SDR, subgroup 12

 Score =  111 bits (279), Expect = 7e-30
 Identities = 62/195 (31%), Positives = 85/195 (43%), Gaps = 6/195 (3%)

Query: 45  VSGKVVIITGASSGIGEHLAYEYARRGACLALCARREKSLEEVADTAREIGSPDVITIRA 104
           + GKV I+TGA +GIG   A   AR G    + A  +    +      +I     + +R 
Sbjct: 1   LEGKVAIVTGAGAGIGAACAARLAREG-ARVVVADIDGGAAQAV--VAQIAG-GALALRV 56

Query: 105 DVSKVDDCRSLVEETMNHFGRLDHLVNNAGISSVALFEDIVNITDFKQIMNINFWGSVYT 164
           DV+      +L E  +  FG LD LVNNAG   +       ++  + Q M IN  G+   
Sbjct: 57  DVTDEQQVAALFERAVEEFGGLDLLVNNAGAMHLTPAIIDTDLAVWDQTMAINLRGTFLC 116

Query: 165 TRFAVPHLRYT-KGKIVVLSSAASWLTAPRMSFYNASKAALVLFFETLRVELGSD-VGVT 222
            R A P +     G IV LSS A     P    Y ASKAA+     TL  EL    +   
Sbjct: 117 CRHAAPRMIARGGGSIVNLSSIAGQSGDPGYGAYGASKAAIRNLTRTLAAELRHAGIRCN 176

Query: 223 IVTPGFIESELTQGK 237
            + PG I++ L   K
Sbjct: 177 ALAPGLIDTPLLLAK 191

These are classical SDRs, with the canonical active site tetrad and glycine-rich NAD-binding motif. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold (alpha/beta folding pattern with a central beta-sheet), an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Classical SDRs are typically about 250 residues long, while extended SDRs are approximately 350 residues. Sequence identity between different SDR enzymes are typically in the 15-30% range, but the enzymes share the Rossmann fold NAD-binding motif and characteristic NAD-binding and catalytic sequence patterns. These enzymes catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase (15-PGDH) numbering). In addition to the Tyr and Lys, there is often an upstream Ser (Ser-138, 15-PGDH numbering) and/or an Asn (Asn-107, 15-PGDH numbering) contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. Extended SDRs have additional elements in the C-terminal region, and typically have a TGXXGXXG cofactor binding motif. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid synthase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type ketoacyl reductases have a TGXXXGX(1-2)G NAD(P)-binding motif. Some atypical SDRs have lost catalytic activity and/or have an unusual NAD(P)-binding motif and missing or unusual active site residues. Reactions catalyzed within the SDR family include isomerization, decarboxylation, epimerization, C=N bond reduction, dehydratase activity, dehalogenation, Enoyl-CoA reduction, and carbonyl-alcohol oxidoreduction. Length = 246

>gnl|CDD|180458 PRK06194, PRK06194, hypothetical protein; Provisional

 Score =  112 bits (282), Expect = 8e-30
 Identities = 63/204 (30%), Positives = 102/204 (50%), Gaps = 14/204 (6%)

Query: 43  EDVSGKVVIITGASSGIGEHLAYEYARRGACLALCARREKSLEEVADTAREIGSPDVITI 102
           +D +GKV +ITGA+SG G   A   A  G  L L   ++ +L+      R  G+ +V+ +
Sbjct: 2   KDFAGKVAVITGAASGFGLAFARIGAALGMKLVLADVQQDALDRAVAELRAQGA-EVLGV 60

Query: 103 RADVSKVDDCRSLVEETMNHFGRLDHLVNNAGISSVAL-FEDIVNITDFKQIMNINFWGS 161
           R DVS      +L +  +  FG +  L NNAG+ +  L +E+ +   D++ ++ +N WG 
Sbjct: 61  RTDVSDAAQVEALADAALERFGAVHLLFNNAGVGAGGLVWENSLA--DWEWVLGVNLWGV 118

Query: 162 VYTTRFAVPHL-------RYTKGKIVVLSSAASWLTAPRMSFYNASKAALVLFFETLRVE 214
           ++  R   P +          +G IV  +S A  L  P M  YN SK A+V   ETL  +
Sbjct: 119 IHGVRAFTPLMLAAAEKDPAYEGHIVNTASMAGLLAPPAMGIYNVSKHAVVSLTETLYQD 178

Query: 215 L---GSDVGVTIVTPGFIESELTQ 235
           L      VG +++ P F+ + + Q
Sbjct: 179 LSLVTDQVGASVLCPYFVPTGIWQ 202

Length = 287

>gnl|CDD|181585 PRK08936, PRK08936, glucose-1-dehydrogenase; Provisional

 Score =  109 bits (275), Expect = 4e-29
 Identities = 60/202 (29%), Positives = 106/202 (52%), Gaps = 12/202 (5%)

Query: 44  DVSGKVVIITGASSGIGEHLAYEYARRGACLALCAR-REKSLEEVADTAREIGSPDVITI 102
           D+ GKVV+ITG S+G+G  +A  + +  A + +  R  E+   +VA+  ++ G  + I +
Sbjct: 4   DLEGKVVVITGGSTGLGRAMAVRFGKEKAKVVINYRSDEEEANDVAEEIKKAGG-EAIAV 62

Query: 103 RADVSKVDDCRSLVEETMNHFGRLDHLVNNAGISSVALFEDIVNITDFKQIMNINFWGSV 162
           + DV+   D  +L++  +  FG LD ++NNAGI +     + +++ D+ +++N N  G+ 
Sbjct: 63  KGDVTVESDVVNLIQTAVKEFGTLDVMINNAGIENAVPSHE-MSLEDWNKVINTNLTGAF 121

Query: 163 YTTRFAVPHLRY-----TKGKIVVLSSAASWLTAPRMSFYNASKAALVLFFETLRVELGS 217
             +R A   ++Y      KG I+ +SS    +  P    Y ASK  + L  ETL +E   
Sbjct: 122 LGSREA---IKYFVEHDIKGNIINMSSVHEQIPWPLFVHYAASKGGVKLMTETLAMEYAP 178

Query: 218 D-VGVTIVTPGFIESELTQGKF 238
             + V  + PG I + +   KF
Sbjct: 179 KGIRVNNIGPGAINTPINAEKF 200

Length = 261

>gnl|CDD|181335 PRK08264, PRK08264, short chain dehydrogenase; Validated

 Score =  108 bits (273), Expect = 6e-29
 Identities = 58/196 (29%), Positives = 86/196 (43%), Gaps = 15/196 (7%)

Query: 44  DVSGKVVIITGASSGIGEHLAYEYARRGAC-LALCARREKSLEEVADTAREIGSPDVITI 102
           D+ GKVV++TGA+ GIG     +   RGA  +   AR  +S+ +          P V+ +
Sbjct: 3   DIKGKVVLVTGANRGIGRAFVEQLLARGAAKVYAAARDPESVTD--------LGPRVVPL 54

Query: 103 RADVSKVDDCRSLVEETMNHFGRLDHLVNNAGISSVALFEDIVNITDFKQIMNINFWGSV 162
           + DV+        V         +  LVNNAGI          +    +  M  N++G +
Sbjct: 55  QLDVTDPAS----VAAAAEAASDVTILVNNAGIFRTGSLLLEGDEDALRAEMETNYFGPL 110

Query: 163 YTTRFAVPHL-RYTKGKIVVLSSAASWLTAPRMSFYNASKAALVLFFETLRVEL-GSDVG 220
              R   P L     G IV + S  SW+  P +  Y+ASKAA     + LR EL      
Sbjct: 111 AMARAFAPVLAANGGGAIVNVLSVLSWVNFPNLGTYSASKAAAWSLTQALRAELAPQGTR 170

Query: 221 VTIVTPGFIESELTQG 236
           V  V PG I++++  G
Sbjct: 171 VLGVHPGPIDTDMAAG 186

Length = 238

>gnl|CDD|235693 PRK06077, fabG, 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional

 Score =  109 bits (273), Expect = 9e-29
 Identities = 59/193 (30%), Positives = 105/193 (54%), Gaps = 8/193 (4%)

Query: 44  DVSGKVVIITGASSGIGEHLAYEYARRGACLALCARREKSLEEVADTAREI---GSPDVI 100
            +  KVV++TG+  GIG  +A   A+ G+ + + A+  K  EE+ +T + +   G  + I
Sbjct: 3   SLKDKVVVVTGSGRGIGRAIAVRLAKEGSLVVVNAK--KRAEEMNETLKMVKENGG-EGI 59

Query: 101 TIRADVSKVDDCRSLVEETMNHFGRLDHLVNNAGISSVALFEDIVNITDFKQIMNINFWG 160
            + ADVS  + C +L + T++ +G  D LVNNAG+   + F ++ +    K I + +F  
Sbjct: 60  GVLADVSTREGCETLAKATIDRYGVADILVNNAGLGLFSPFLNVDDKLIDKHI-STDFKS 118

Query: 161 SVYTTRFAVPHLRYTKGKIVVLSSAASWLTAPRMSFYNASKAALVLFFETLRVELGSDVG 220
            +Y ++     +R   G IV ++S A    A  +S Y A KAA++   + L +EL   + 
Sbjct: 119 VIYCSQELAKEMR-EGGAIVNIASVAGIRPAYGLSIYGAMKAAVINLTKYLALELAPKIR 177

Query: 221 VTIVTPGFIESEL 233
           V  + PGF++++L
Sbjct: 178 VNAIAPGFVKTKL 190

Length = 252

>gnl|CDD|213929 TIGR04316, dhbA_paeA, 2,3-dihydro-2,3-dihydroxybenzoate dehydrogenase

 Score =  108 bits (272), Expect = 1e-28
 Identities = 57/192 (29%), Positives = 96/192 (50%), Gaps = 10/192 (5%)

Query: 50  VIITGASSGIGEHLAYEYARRGACLALCARREKSLEEVADTAREIGSPDVITIRADVSKV 109
           V++TGA+ GIG  +A   A  GA +A   R  + L E+    R  G P   T + DV+  
Sbjct: 1   VLVTGAAQGIGYAVARALAEAGARVAAVDRNFEQLLELVADLRRYGYP-FATYKLDVADS 59

Query: 110 DDCRSLVEETMNHFGRLDHLVNNAGISSVALFEDIVNITDFKQIMNINFWGSVYTTRFAV 169
                +V+     +G +D LVN AGI  +   + + +  D++    +N +G    ++   
Sbjct: 60  AAVDEVVQRLEREYGPIDVLVNVAGILRLGAIDSL-SDEDWQATFAVNTFGVFNVSQAVS 118

Query: 170 PHLRYTK-GKIVVLSSAASWLTAPR--MSFYNASKAALVLFFETLRVELGSDVGV--TIV 224
           P ++  + G IV + S A+    PR  M+ Y ASKAAL +  + L +EL    G+   +V
Sbjct: 119 PRMKRRRSGAIVTVGSNAA--NVPRMGMAAYAASKAALTMLTKCLGLELAPY-GIRCNVV 175

Query: 225 TPGFIESELTQG 236
           +PG  ++E+ + 
Sbjct: 176 SPGSTDTEMQRQ 187

Members of this family are 2,3-dihydro-2,3-dihydroxybenzoate dehydrogenase (EC 1.3.1.28), the third enzyme in the biosynthesis of 2,3-dihydroxybenzoic acid (DHB) from chorismate. The first two enzymes are isochorismate synthase (EC 5.4.4.2) and isochorismatase (EC 3.3.2.1). Synthesis is often followed by adenylation by the enzyme DHBA-AMP ligase (EC 2.7.7.58) to activate (DHB) for a non-ribosomal peptide synthetase. Length = 250

>gnl|CDD|187604 cd05346, SDR_c5, classical (c) SDR, subgroup 5

 Score =  108 bits (271), Expect = 2e-28
 Identities = 68/196 (34%), Positives = 105/196 (53%), Gaps = 8/196 (4%)

Query: 48  KVVIITGASSGIGEHLAYEYARRGACLALCARREKSLEEVADTAREIGSPDVITIRADVS 107
           K V+ITGASSGIGE  A  +A+ GA L L  RR + L+E+AD         V+ ++ DVS
Sbjct: 1   KTVLITGASSGIGEATARRFAKAGAKLILTGRRAERLQELADELGAKFPVKVLPLQLDVS 60

Query: 108 KVDDCRSLVEETMNHFGRLDHLVNNAGISSVALFEDIV---NITDFKQIMNINFWGSVYT 164
             +   + +E     F  +D LVNNAG+   AL  D     ++ D++ +++ N  G +  
Sbjct: 61  DRESIEAALENLPEEFRDIDILVNNAGL---ALGLDPAQEADLEDWETMIDTNVKGLLNV 117

Query: 165 TRFAVPHL-RYTKGKIVVLSSAASWLTAPRMSFYNASKAALVLFFETLRVEL-GSDVGVT 222
           TR  +P +    +G I+ L S A        + Y A+KAA+  F   LR +L G+ + VT
Sbjct: 118 TRLILPIMIARNQGHIINLGSIAGRYPYAGGNVYCATKAAVRQFSLNLRKDLIGTGIRVT 177

Query: 223 IVTPGFIESELTQGKF 238
            + PG +E+E +  +F
Sbjct: 178 NIEPGLVETEFSLVRF 193

These proteins are members of the classical SDR family, with a canonical active site tetrad and a typical Gly-rich NAD-binding motif. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold (alpha/beta folding pattern with a central beta-sheet), an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Classical SDRs are typically about 250 residues long, while extended SDRs are approximately 350 residues. Sequence identity between different SDR enzymes are typically in the 15-30% range, but the enzymes share the Rossmann fold NAD-binding motif and characteristic NAD-binding and catalytic sequence patterns. These enzymes catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase (15-PGDH) numbering). In addition to the Tyr and Lys, there is often an upstream Ser (Ser-138, 15-PGDH numbering) and/or an Asn (Asn-107, 15-PGDH numbering) contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. Extended SDRs have additional elements in the C-terminal region, and typically have a TGXXGXXG cofactor binding motif. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid synthase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type ketoacyl reductases have a TGXXXGX(1-2)G NAD(P)-binding motif. Some atypical SDRs have lost catalytic activity and/or have an unusual NAD(P)-binding motif and missing or unusual active site residues. Reactions catalyzed within the SDR family include isomerization, decarboxylation, epimerization, C=N bond reduction, dehydratase activity, dehalogenation, Enoyl-CoA reduction, and carbonyl-alcohol oxidoreduction. Length = 249

>gnl|CDD|184025 PRK13394, PRK13394, 3-hydroxybutyrate dehydrogenase; Provisional

 Score =  108 bits (270), Expect = 2e-28
 Identities = 59/195 (30%), Positives = 99/195 (50%), Gaps = 5/195 (2%)

Query: 44  DVSGKVVIITGASSGIGEHLAYEYARRGACLALCARREKSLEEVADTAREIGSPDVITIR 103
           +++GK  ++TGA+SGIG+ +A E AR GA +A+    +     VAD   + G    I + 
Sbjct: 4   NLNGKTAVVTGAASGIGKEIALELARAGAAVAIADLNQDGANAVADEINKAGG-KAIGVA 62

Query: 104 ADVSKVDDCRSLVEETMNHFGRLDHLVNNAGISSVALFEDIVNITDFKQIMNINFWGSVY 163
            DV+  D   + +++    FG +D LV+NAGI  V   E+  +  D+K++  I+  G+  
Sbjct: 63  MDVTNEDAVNAGIDKVAERFGSVDILVSNAGIQIVNPIENY-SFADWKKMQAIHVDGAFL 121

Query: 164 TTRFAVPHLRYTK--GKIVVLSSAASWLTAPRMSFYNASKAALVLFFETLRVE-LGSDVG 220
           TT+ A+ H+      G ++ + S  S   +P  S Y  +K  L+     L  E    +V 
Sbjct: 122 TTKAALKHMYKDDRGGVVIYMGSVHSHEASPLKSAYVTAKHGLLGLARVLAKEGAKHNVR 181

Query: 221 VTIVTPGFIESELTQ 235
             +V PGF+ + L  
Sbjct: 182 SHVVCPGFVRTPLVD 196

Length = 262

>gnl|CDD|235631 PRK05866, PRK05866, short chain dehydrogenase; Provisional

 Score =  108 bits (272), Expect = 2e-28
 Identities = 70/188 (37%), Positives = 100/188 (53%), Gaps = 11/188 (5%)

Query: 44  DVSGKVVIITGASSGIGEHLAYEYARRGACLALCARREKSLEEVADTAREIGSPDVITIR 103
           D++GK +++TGASSGIGE  A ++ARRGA +   ARRE  L+ VAD     G  D + + 
Sbjct: 37  DLTGKRILLTGASSGIGEAAAEQFARRGATVVAVARREDLLDAVADRITRAGG-DAMAVP 95

Query: 104 ADVSKVDDCRSLVEETMNHFGRLDHLVNNAGIS-SVALFEDIVNITDFKQIMNINFWGSV 162
            D+S +D   +LV +     G +D L+NNAG S    L E +    D ++ M +N++  +
Sbjct: 96  CDLSDLDAVDALVADVEKRIGGVDILINNAGRSIRRPLAESLDRWHDVERTMVLNYYAPL 155

Query: 163 YTTR-FAVPHLRYTKGKIVVLSSAASW--LT--APRMSFYNASKAALVLFFETLRVELGS 217
              R  A   L    G I+   + A+W  L+  +P  S YNASKAAL      +  E G 
Sbjct: 156 RLIRGLAPGMLERGDGHII---NVATWGVLSEASPLFSVYNASKAALSAVSRVIETEWG- 211

Query: 218 DVGVTIVT 225
           D GV   T
Sbjct: 212 DRGVHSTT 219

Length = 293

>gnl|CDD|236094 PRK07774, PRK07774, short chain dehydrogenase; Provisional

 Score =  107 bits (268), Expect = 3e-28
 Identities = 63/197 (31%), Positives = 98/197 (49%), Gaps = 8/197 (4%)

Query: 42  SEDVSGKVVIITGASSGIGEHLAYEYARRGACLALCARREKSLEEVADTAREIGSPDVIT 101
                 KV I+TGA+ GIG+  A   AR GA + +     +  E VA      G    I 
Sbjct: 1   MGRFDDKVAIVTGAAGGIGQAYAEALAREGASVVVADINAEGAERVAKQIVADGG-TAIA 59

Query: 102 IRADVSKVDDCRSLVEETMNHFGRLDHLVNNAGISSVALFEDI--VNITDFKQIMNINFW 159
           ++ DVS  D  +++ + T++ FG +D+LVNNA I      + +  V    +K+ M++N  
Sbjct: 60  VQVDVSDPDSAKAMADATVSAFGGIDYLVNNAAIYGGMKLDLLITVPWDYYKKFMSVNLD 119

Query: 160 GSVYTTRFAVPHLRYTK-GKIVVLSSAASWLTAPRMSFYNASKAALVLFFETLRVELG-S 217
           G++  TR    H+     G IV  SS A+WL +   +FY  +K  L    + L  ELG  
Sbjct: 120 GALVCTRAVYKHMAKRGGGAIVNQSSTAAWLYS---NFYGLAKVGLNGLTQQLARELGGM 176

Query: 218 DVGVTIVTPGFIESELT 234
           ++ V  + PG I++E T
Sbjct: 177 NIRVNAIAPGPIDTEAT 193

Length = 250

>gnl|CDD|187590 cd05329, TR_SDR_c, tropinone reductase-I and II (TR-1, and TR-II)-like, classical (c) SDRs

 Score =  107 bits (268), Expect = 4e-28
 Identities = 65/195 (33%), Positives = 97/195 (49%), Gaps = 9/195 (4%)

Query: 47  GKVVIITGASSGIGEHLAYEYARRGACLALCARREKSLEEVADTAREIGSPDVITIRADV 106
           GK  ++TG + GIG  +  E A  GA +  CAR +K L+E     RE G   V     DV
Sbjct: 6   GKTALVTGGTKGIGYAIVEELAGLGAEVYTCARNQKELDECLTEWREKGF-KVEGSVCDV 64

Query: 107 SKVDDCRSLVEETMNHF-GRLDHLVNNAGISSVALFEDIVNIT--DFKQIMNINFWGSVY 163
           S   + + L++   +HF G+L+ LVNNAG +   + ++  + T  D+  IM+ NF  + +
Sbjct: 65  SSRSERQELMDTVASHFGGKLNILVNNAGTN---IRKEAKDYTEEDYSLIMSTNFEAAYH 121

Query: 164 TTRFAVPHL-RYTKGKIVVLSSAASWLTAPRMSFYNASKAALVLFFETLRVELGSD-VGV 221
            +R A P L     G IV +SS A  +  P  + Y A+K AL     +L  E   D + V
Sbjct: 122 LSRLAHPLLKASGNGNIVFISSVAGVIAVPSGAPYGATKGALNQLTRSLACEWAKDNIRV 181

Query: 222 TIVTPGFIESELTQG 236
             V P  I + L + 
Sbjct: 182 NAVAPWVIATPLVEP 196

This subgroup includes TR-I and TR-II; these proteins are members of the SDR family. TRs catalyze the NADPH-dependent reductions of the 3-carbonyl group of tropinone, to a beta-hydroxyl group. TR-I and TR-II produce different stereoisomers from tropinone, TR-I produces tropine (3alpha-hydroxytropane), and TR-II, produces pseudotropine (sigma-tropine, 3beta-hydroxytropane). SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold (alpha/beta folding pattern with a central beta-sheet), an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Classical SDRs are typically about 250 residues long, while extended SDRs are approximately 350 residues. Sequence identity between different SDR enzymes are typically in the 15-30% range, but the enzymes share the Rossmann fold NAD-binding motif and characteristic NAD-binding and catalytic sequence patterns. These enzymes catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase (15-PGDH) numbering). In addition to the Tyr and Lys, there is often an upstream Ser (Ser-138, 15-PGDH numbering) and/or an Asn (Asn-107, 15-PGDH numbering) contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. Extended SDRs have additional elements in the C-terminal region, and typically have a TGXXGXXG cofactor binding motif. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid synthase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type ketoacyl reductases have a TGXXXGX(1-2)G NAD(P)-binding motif. Some atypical SDRs have lost catalytic activity and/or have an unusual NAD(P)-binding motif and missing or unusual active site residues. Reactions catalyzed within the SDR family include isomerization, decarboxylation, epimerization, C=N bond reduction, dehydratase activity, dehalogenation, Enoyl-CoA reduction, and carbonyl-alcohol oxidoreduction. Length = 251

>gnl|CDD|187614 cd05356, 17beta-HSD1_like_SDR_c, 17-beta-hydroxysteroid dehydrogenases (17beta-HSDs) types -1, -3, and -12, -like, classical (c) SDRs

 Score =  106 bits (267), Expect = 4e-28
 Identities = 62/197 (31%), Positives = 98/197 (49%), Gaps = 12/197 (6%)

Query: 47  GKVVIITGASSGIGEHLAYEYARRGACLALCARREKSLEEVADTAREIGSPDVITIRADV 106
           G   ++TGA+ GIG+  A E A+RG  + L +R ++ L+ VA    E    +  TI AD 
Sbjct: 1   GTWAVVTGATDGIGKAYAEELAKRGFNVILISRTQEKLDAVAKEIEEKYGVETKTIAADF 60

Query: 107 SKVDDCRSLVEETMNHFGRLD--HLVNNAGIS---SVALFEDIVNITDFKQIMNINFWGS 161
           S  DD    +E+ +     LD   LVNN GIS        E      + + I+N+N   +
Sbjct: 61  SAGDDIYERIEKELEG---LDIGILVNNVGISHSIPEYFLE--TPEDELQDIINVNVMAT 115

Query: 162 VYTTRFAVPH-LRYTKGKIVVLSSAASWLTAPRMSFYNASKAALVLFFETLRVELGSD-V 219
           +  TR  +P  ++  KG IV +SS A  +  P ++ Y+ASKA L  F   L  E  S  +
Sbjct: 116 LKMTRLILPGMVKRKKGAIVNISSFAGLIPTPLLATYSASKAFLDFFSRALYEEYKSQGI 175

Query: 220 GVTIVTPGFIESELTQG 236
            V  + P  + +++++ 
Sbjct: 176 DVQSLLPYLVATKMSKI 192

This subgroup includes various 17-beta-hydroxysteroid dehydrogenases and 3-ketoacyl-CoA reductase, these are members of the SDR family, and contain the canonical active site tetrad and glycine-rich NAD-binding motif of the classical SDRs. 3-ketoacyl-CoA reductase (KAR, aka 17beta-HSD type 12, encoded by HSD17B12) acts in fatty acid elongation; 17beta- hydroxysteroid dehydrogenases are isozymes that catalyze activation and inactivation of estrogen and androgens, and include members of the SDR family. 17beta-estradiol dehydrogenase (aka 17beta-HSD type 1, encoded by HSD17B1) converts estrone to estradiol. Estradiol is the predominant female sex hormone. 17beta-HSD type 3 (aka testosterone 17-beta-dehydrogenase 3, encoded by HSD17B3) catalyses the reduction of androstenedione to testosterone, it also accepts estrogens as substrates. This subgroup also contains a putative steroid dehydrogenase let-767 from Caenorhabditis elegans, mutation in which results in hypersensitivity to cholesterol limitation. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold (alpha/beta folding pattern with a central beta-sheet), an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Classical SDRs are typically about 250 residues long, while extended SDRS are approximately 350 residues. Sequence identity between different SDR enzymes are typically in the 15-30% range, but the enzymes share the Rossmann fold NAD-binding motif and characteristic NAD-binding and catalytic sequence patterns. These enzymes have a 3-glycine N-terminal NAD(P)(H)-binding pattern (typically, TGxxxGxG in classical SDRs and TGxxGxxG in extended SDRs), while substrate binding is in the C-terminal region. A critical catalytic Tyr residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase (15-PGDH) numbering), is often found in a conserved YXXXK pattern. In addition to the Tyr and Lys, there is often an upstream Ser (Ser-138, 15-PGDH numbering) and/or an Asn (Asn-107, 15-PGDH numbering) or additional Ser, contributing to the active site. Substrates for these enzymes include sugars, steroids, alcohols, and aromatic compounds. The standard reaction mechanism is a proton relay involving the conserved Tyr and Lys, as well as Asn (or Ser). Some SDR family members, including 17 beta-hydroxysteroid dehydrogenase contain an additional helix-turn-helix motif that is not generally found among SDRs. Length = 239

>gnl|CDD|187665 cd09805, type2_17beta_HSD-like_SDR_c, human 17beta-hydroxysteroid dehydrogenase type 2 (type 2 17beta-HSD)-like, classical (c) SDRs

 Score =  107 bits (269), Expect = 7e-28
 Identities = 65/190 (34%), Positives = 97/190 (51%), Gaps = 17/190 (8%)

Query: 48  KVVIITGASSGIGEHLAYEYARRG-ACLALCARREKSLEEVADTA---REIGSPDVITIR 103
           K V+ITG  SG G  LA +    G   LA C      L +    A   R + S  + T++
Sbjct: 1   KAVLITGCDSGFGNLLAKKLDSLGFTVLAGC------LTKNGPGAKELRRVCSDRLRTLQ 54

Query: 104 ADVSKVDDCRSLVEETMNHFGR--LDHLVNNAGISSVALFEDIVNITDFKQIMNINFWGS 161
            DV+K +  +   +    H G   L  LVNNAGI      E+++ + D+++ M +N +G+
Sbjct: 55  LDVTKPEQIKRAAQWVKEHVGEKGLWGLVNNAGILGFGGDEELLPMDDYRKCMEVNLFGT 114

Query: 162 VYTTRFAVPHLRYTKGKIVVLSSAASWLTAPRMSFYNASKAALVLFFETLRVEL---GSD 218
           V  T+  +P LR  KG++V +SS    +  P    Y ASKAA+  F ++LR EL   G  
Sbjct: 115 VEVTKAFLPLLRRAKGRVVNVSSMGGRVPFPAGGAYCASKAAVEAFSDSLRRELQPWG-- 172

Query: 219 VGVTIVTPGF 228
           V V+I+ PG 
Sbjct: 173 VKVSIIEPGN 182

17beta-hydroxysteroid dehydrogenases are a group of isozymes that catalyze activation and inactivation of estrogen and androgens. This classical-SDR subgroup includes the human proteins: type 2 17beta-HSD, type 6 17beta-HSD, type 2 11beta-HSD, dehydrogenase/reductase SDR family member 9, short-chain dehydrogenase/reductase family 9C member 7, 3-hydroxybutyrate dehydrogenase type 1, and retinol dehydrogenase 5. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold (alpha/beta folding pattern with a central beta-sheet), an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Classical SDRs are typically about 250 residues long, while extended SDRs are approximately 350 residues. Sequence identity between different SDR enzymes are typically in the 15-30% range, but the enzymes share the Rossmann fold NAD-binding motif and characteristic NAD-binding and catalytic sequence patterns. These enzymes catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase (15-PGDH) numbering). In addition to the Tyr and Lys, there is often an upstream Ser (Ser-138, 15-PGDH numbering) and/or an Asn (Asn-107, 15-PGDH numbering) contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. Extended SDRs have additional elements in the C-terminal region, and typically have a TGXXGXXG cofactor binding motif. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid synthase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type ketoacyl reductases have a TGXXXGX(1-2)G NAD(P)-binding motif. Some atypical SDRs have lost catalytic activity and/or have an unusual NAD(P)-binding motif and missing or unusual active site residues. Reactions catalyzed within the SDR family include isomerization, decarboxylation, epimerization, C=N bond reduction, dehydratase activity, dehalogenation, Enoyl-CoA reduction, and carbonyl-alcohol oxidoreduction. Length = 281

>gnl|CDD|236241 PRK08324, PRK08324, short chain dehydrogenase; Validated

 Score =  111 bits (279), Expect = 7e-28
 Identities = 56/176 (31%), Positives = 89/176 (50%), Gaps = 7/176 (3%)

Query: 46  SGKVVIITGASSGIGEHLAYEYARRGACLALCARREKSLEEVADTAREIGSPD-VITIRA 104
           +GKV ++TGA+ GIG+  A   A  GAC+ L    E++ E  A    E+G PD  + +  
Sbjct: 421 AGKVALVTGAAGGIGKATAKRLAAEGACVVLADLDEEAAEAAA---AELGGPDRALGVAC 477

Query: 105 DVSKVDDCRSLVEETMNHFGRLDHLVNNAGISSVALFEDIVNITDFKQIMNINFWGSVYT 164
           DV+     ++  EE    FG +D +V+NAGI+     E+  +  D+++  ++N  G    
Sbjct: 478 DVTDEAAVQAAFEEAALAFGGVDIVVSNAGIAISGPIEE-TSDEDWRRSFDVNATGHFLV 536

Query: 165 TRFAVPHLRY--TKGKIVVLSSAASWLTAPRMSFYNASKAALVLFFETLRVELGSD 218
            R AV  ++     G IV ++S  +    P    Y A+KAA +     L +ELG D
Sbjct: 537 AREAVRIMKAQGLGGSIVFIASKNAVNPGPNFGAYGAAKAAELHLVRQLALELGPD 592

Length = 681

>gnl|CDD|187628 cd05370, SDR_c2, classical (c) SDR, subgroup 2

 Score =  105 bits (263), Expect = 1e-27
 Identities = 57/197 (28%), Positives = 99/197 (50%), Gaps = 8/197 (4%)

Query: 44  DVSGKVVIITGASSGIGEHLAYEYARRGACLALCARREKSLEEVADTAREIGSPDVITIR 103
            ++G  V+ITG +SGIG  LA ++   G  + +  RRE+ L E     +E+  P++ TI 
Sbjct: 2   KLTGNTVLITGGTSGIGLALARKFLEAGNTVIITGRREERLAEA---KKEL--PNIHTIV 56

Query: 104 ADVSKVDDCRSLVEETMNHFGRLDHLVNNAGISSVALFED-IVNITDFKQIMNINFWGSV 162
            DV   +   +L E  ++ +  LD L+NNAGI       D   ++      ++ N  G +
Sbjct: 57  LDVGDAESVEALAEALLSEYPNLDILINNAGIQRPIDLRDPASDLDKADTEIDTNLIGPI 116

Query: 163 YTTRFAVPHL-RYTKGKIVVLSSAASWLTAPRMSFYNASKAALVLFFETLRVEL-GSDVG 220
              +  +PHL +  +  IV +SS  +++       Y A+KAAL  +   LR +L  + V 
Sbjct: 117 RLIKAFLPHLKKQPEATIVNVSSGLAFVPMAANPVYCATKAALHSYTLALRHQLKDTGVE 176

Query: 221 VTIVTPGFIESELTQGK 237
           V  + P  +++EL + +
Sbjct: 177 VVEIVPPAVDTELHEER 193

Short-chain dehydrogenases/reductases (SDRs, aka Tyrosine-dependent oxidoreductases) are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold (alpha/beta folding pattern with a central beta-sheet), an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Classical SDRs are typically about 250 residues long, while extended SDRs are approximately 350 residues. Sequence identity between different SDR enzymes are typically in the 15-30% range, but the enzymes share the Rossmann fold NAD-binding motif and characteristic NAD-binding and catalytic sequence patterns. These enzymes catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase (15-PGDH) numbering). In addition to the Tyr and Lys, there is often an upstream Ser (Ser-138, 15-PGDH numbering) and/or an Asn (Asn-107, 15-PGDH numbering) contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. Extended SDRs have additional elements in the C-terminal region, and typically have a TGXXGXXG cofactor binding motif. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid synthase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type ketoacyl reductases have a TGXXXGX(1-2)G NAD(P)-binding motif. Some atypical SDRs have lost catalytic activity and/or have an unusual NAD(P)-binding motif and missing or unusual active site residues. Reactions catalyzed within the SDR family include isomerization, decarboxylation, epimerization, C=N bond reduction, dehydratase activity, dehalogenation, Enoyl-CoA reduction, and carbonyl-alcohol oxidoreduction. Length = 228

>gnl|CDD|187587 cd05326, secoisolariciresinol-DH_like_SDR_c, secoisolariciresinol dehydrogenase (secoisolariciresinol-DH)-like, classical (c) SDRs

 Score =  105 bits (264), Expect = 1e-27
 Identities = 60/191 (31%), Positives = 101/191 (52%), Gaps = 8/191 (4%)

Query: 47  GKVVIITGASSGIGEHLAYEYARRGACLALCARREKSLEEVADTAREIGSPDVITIRADV 106
           GKV IITG +SGIGE  A  +A+ GA + +    + + + VA    E+G PD+  +  DV
Sbjct: 4   GKVAIITGGASGIGEATARLFAKHGARVVIADIDDDAGQAVA---AELGDPDISFVHCDV 60

Query: 107 SKVDDCRSLVEETMNHFGRLDHLVNNAGISSVALFEDIVNIT--DFKQIMNINFWGSVYT 164
           +   D R+ V+  +  FGRLD + NNAG+     +  I+  +  +F++++++N +G+   
Sbjct: 61  TVEADVRAAVDTAVARFGRLDIMFNNAGVLGAPCY-SILETSLEEFERVLDVNVYGAFLG 119

Query: 165 TRFAVPHLR-YTKGKIVVLSSAASWLTAPRMSFYNASKAALVLFFETLRVELGS-DVGVT 222
           T+ A   +    KG IV ++S A  +       Y ASK A++    +   ELG   + V 
Sbjct: 120 TKHAARVMIPAKKGSIVSVASVAGVVGGLGPHAYTASKHAVLGLTRSAATELGEHGIRVN 179

Query: 223 IVTPGFIESEL 233
            V+P  + + L
Sbjct: 180 CVSPYGVATPL 190

Podophyllum secoisolariciresinol-DH is a homo tetrameric, classical SDR that catalyzes the NAD-dependent conversion of (-)-secoisolariciresinol to (-)-matairesinol via a (-)-lactol intermediate. (-)-Matairesinol is an intermediate to various 8'-lignans, including the cancer-preventive mammalian lignan, and those involved in vascular plant defense. This subgroup also includes rice momilactone A synthase which catalyzes the conversion of 3beta-hydroxy-9betaH-pimara-7,15-dien-19,6beta-olide into momilactone A, Arabidopsis ABA2 which during abscisic acid (ABA) biosynthesis, catalyzes the conversion of xanthoxin to abscisic aldehyde and, maize Tasselseed2 which participate in the maize sex determination pathway. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold (alpha/beta folding pattern with a central beta-sheet), an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Classical SDRs are typically about 250 residues long, while extended SDRs are approximately 350 residues. Sequence identity between different SDR enzymes are typically in the 15-30% range, but the enzymes share the Rossmann fold NAD-binding motif and characteristic NAD-binding and catalytic sequence patterns. These enzymes catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, 15-hydroxyprostaglandin dehydrogenase (15-PGDH) numbering). In addition to the Tyr and Lys, there is often an upstream Ser (Ser-138, 15-PGDH numbering) and/or an Asn (Asn-107, 15-PGDH numbering) contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. Extended SDRs have additional elements in the C-terminal region, and typically have a TGXXGXXG cofactor binding motif. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid synthase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type ketoacyl reductases have a TGXXXGX(1-2)G NAD(P)-binding motif. Some atypical SDRs have lost catalytic activity and/or have an unusual NAD(P)-binding motif and missing or unusual active site residues. Reactions catalyzed within the SDR family include isomerization, decarboxylation, epimerization, C=N bond reduction, dehydratase activity, dehalogenation, Enoyl-CoA reduction, and carbonyl-alcohol oxidoreduction. Length = 249

>gnl|CDD|187610 cd05352, MDH-like_SDR_c, mannitol dehydrogenase (MDH)-like, classical (c) SDRs

 Score =  105 bits (264), Expect = 1e-27
 Identities = 53/195 (27%), Positives = 95/195 (48%), Gaps = 5/195 (2%)

Query: 44  DVSGKVVIITGASSGIGEHLAYEYARRGACLALCARREKSLEEVADTAREIGSPDVITIR 103
            + GKV I+TG S GIG  +A   A  GA +A+        EE A+   +         +
Sbjct: 5   SLKGKVAIVTGGSRGIGLAIARALAEAGADVAIIYNSAPRAEEKAEELAKKYGVKTKAYK 64

Query: 104 ADVSKVDDCRSLVEETMNHFGRLDHLVNNAGISSVALFEDIVNITDFKQIMNINFWGSVY 163
            DVS  +      ++    FG++D L+ NAGI+      D      + +++++N  G   
Sbjct: 65  CDVSSQESVEKTFKQIQKDFGKIDILIANAGITVHKPALDY-TYEQWNKVIDVNLNGVFN 123

Query: 164 TTRFAVPHLRYT-KGKIVVLSSAASWL-TAPR-MSFYNASKAALVLFFETLRVELGSD-V 219
             + A    +   KG +++ +S +  +   P+  + YNASKAA++   ++L VE     +
Sbjct: 124 CAQAAAKIFKKQGKGSLIITASMSGTIVNRPQPQAAYNASKAAVIHLAKSLAVEWAKYFI 183

Query: 220 GVTIVTPGFIESELT 234
            V  ++PG+I+++LT
Sbjct: 184 RVNSISPGYIDTDLT 198

NADP-mannitol dehydrogenase catalyzes the conversion of fructose to mannitol, an acyclic 6-carbon sugar. MDH is a tetrameric member of the SDR family. This subgroup also includes various other tetrameric SDRs, including Pichia stipitis D-arabinitol dehydrogenase (aka polyol dehydrogenase), Candida albicans Sou1p, a sorbose reductase, and Candida parapsilosis (S)-specific carbonyl reductase (SCR, aka S-specific alcohol dehydrogenase) which catalyzes the enantioselective reduction of 2-hydroxyacetophenone into (S)-1-phenyl-1,2-ethanediol. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold (alpha/beta folding pattern with a central beta-sheet), an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Classical SDRs are typically about 250 residues long, while extended SDRS are approximately 350 residues. Sequence identity between different SDR enzymes are typically in the 15-30% range, but the enzymes share the Rossmann fold NAD-binding motif and characteristic NAD-binding and catalytic sequence patterns. These enzymes have a 3-glycine N-terminal NAD(P)(H)-binding pattern (typically, TGxxxGxG in classical SDRs and TGxxGxxG in extended SDRs), while substrate binding is in the C-terminal region. A critical catalytic Tyr residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase (15-PGDH) numbering), is often found in a conserved YXXXK pattern. In addition to the Tyr and Lys, there is often an upstream Ser (Ser-138, 15-PGDH numbering) and/or an Asn (Asn-107, 15-PGDH numbering) or additional Ser, contributing to the active site. Substrates for these enzymes include sugars, steroids, alcohols, and aromatic compounds. The standard reaction mechanism is a proton relay involving the conserved Tyr and Lys, as well as Asn (or Ser). Length = 252

>gnl|CDD|236210 PRK08267, PRK08267, short chain dehydrogenase; Provisional

 Score =  104 bits (262), Expect = 3e-27
 Identities = 59/192 (30%), Positives = 93/192 (48%), Gaps = 7/192 (3%)

Query: 48  KVVIITGASSGIGEHLAYEYARRGACLALCARREKSLEEVADTAREIGSPDVITIRADVS 107
           K + ITGA+SGIG   A  +A  G  +      E  L      A E+G+ +  T   DV+
Sbjct: 2   KSIFITGAASGIGRATALLFAAEGWRVGAYDINEAGLAA---LAAELGAGNAWTGALDVT 58

Query: 108 KVDDCRSLVEE-TMNHFGRLDHLVNNAGISSVALFEDIVNITDFKQIMNINFWGSVYTTR 166
                 + + +      GRLD L NNAGI     FEDI  +    ++++IN  G +    
Sbjct: 59  DRAAWDAALADFAAATGGRLDVLFNNAGILRGGPFEDI-PLEAHDRVIDINVKGVLNGAH 117

Query: 167 FAVPHLRYTKGKIVV-LSSAASWLTAPRMSFYNASKAALVLFFETLRVELG-SDVGVTIV 224
            A+P+L+ T G  V+  SSA++    P ++ Y+A+K A+    E L +E     + V  V
Sbjct: 118 AALPYLKATPGARVINTSSASAIYGQPGLAVYSATKFAVRGLTEALDLEWRRHGIRVADV 177

Query: 225 TPGFIESELTQG 236
            P F+++ +  G
Sbjct: 178 MPLFVDTAMLDG 189

Length = 260

>gnl|CDD|181334 PRK08263, PRK08263, short chain dehydrogenase; Provisional

 Score =  104 bits (262), Expect = 5e-27
 Identities = 59/185 (31%), Positives = 91/185 (49%), Gaps = 9/185 (4%)

Query: 46  SGKVVIITGASSGIGEHLAYEYARRGACLALCARREKSLEEVADTAREIGSPD-VITIRA 104
             KV  ITGAS G G         RG  +   AR   +L ++A+        D ++ +  
Sbjct: 2   MEKVWFITGASRGFGRAWTEAALERGDRVVATARDTATLADLAEK-----YGDRLLPLAL 56

Query: 105 DVSKVDDCRSLVEETMNHFGRLDHLVNNAGISSVALFEDIVNITDFKQIMNINFWGSVYT 164
           DV+      + VE  + HFGRLD +VNNAG     + E+ V  ++ +  ++ NF+G+++ 
Sbjct: 57  DVTDRAAVFAAVETAVEHFGRLDIVVNNAGYGLFGMIEE-VTESEARAQIDTNFFGALWV 115

Query: 165 TRFAVPHLRYT-KGKIVVLSSAASWLTAPRMSFYNASKAALVLFFETLRVEL-GSDVGVT 222
           T+  +P+LR    G I+ +SS       P    Y+ASK AL    E L  E+    + VT
Sbjct: 116 TQAVLPYLREQRSGHIIQISSIGGISAFPMSGIYHASKWALEGMSEALAQEVAEFGIKVT 175

Query: 223 IVTPG 227
           +V PG
Sbjct: 176 LVEPG 180

Length = 275

>gnl|CDD|181305 PRK08226, PRK08226, short chain dehydrogenase; Provisional

 Score =  104 bits (261), Expect = 5e-27
 Identities = 61/196 (31%), Positives = 95/196 (48%), Gaps = 12/196 (6%)

Query: 47  GKVVIITGASSGIGEHLAYEYARRGACLALCARREKSLEEVADTAREIGSP--DVITIRA 104
           GK  +ITGA  GIGE +A  +AR GA L L         E+   A E+         + A
Sbjct: 6   GKTALITGALQGIGEGIARVFARHGANLILLDIS----PEIEKLADELCGRGHRCTAVVA 61

Query: 105 DVSKVDDCRSLVEETMNHFGRLDHLVNNAGISSVALFEDIVN-ITDFKQIMNINFWGSVY 163
           DV       + ++      GR+D LVNNAG+  +  F D+ +   DF   +NI   G   
Sbjct: 62  DVRDPASVAAAIKRAKEKEGRIDILVNNAGVCRLGSFLDMSDEDRDFHIDINIK--GVWN 119

Query: 164 TTRFAVPHLRYTK-GKIVVLSSAASWLTA-PRMSFYNASKAALVLFFETLRVELG-SDVG 220
            T+  +P +   K G+IV++SS    + A P  + Y  +KAA+V   ++L VE   S + 
Sbjct: 120 VTKAVLPEMIARKDGRIVMMSSVTGDMVADPGETAYALTKAAIVGLTKSLAVEYAQSGIR 179

Query: 221 VTIVTPGFIESELTQG 236
           V  + PG++ + + + 
Sbjct: 180 VNAICPGYVRTPMAES 195

Length = 263

>gnl|CDD|235739 PRK06200, PRK06200, 2,3-dihydroxy-2,3-dihydrophenylpropionate dehydrogenase; Provisional

 Score =  104 bits (261), Expect = 6e-27
 Identities = 60/193 (31%), Positives = 95/193 (49%), Gaps = 12/193 (6%)

Query: 47  GKVVIITGASSGIGEHLAYEYARRGACLALCARREKSLEEVADTAREIGSPDVITIRADV 106
           G+V +ITG  SGIG  L   +   GA +A+    E+S E++A   +  G   V+ +  DV
Sbjct: 6   GQVALITGGGSGIGRALVERFLAEGARVAVL---ERSAEKLASLRQRFGD-HVLVVEGDV 61

Query: 107 SKVDDCRSLVEETMNHFGRLDHLVNNAGISSVALFEDIVNITD------FKQIMNINFWG 160
           +   D +  V++T++ FG+LD  V NAGI        +V+I        F +I N+N  G
Sbjct: 62  TSYADNQRAVDQTVDAFGKLDCFVGNAGIWD--YNTSLVDIPAETLDTAFDEIFNVNVKG 119

Query: 161 SVYTTRFAVPHLRYTKGKIVVLSSAASWLTAPRMSFYNASKAALVLFFETLRVELGSDVG 220
            +   + A+P L+ + G ++   S +S+        Y ASK A+V     L  EL   + 
Sbjct: 120 YLLGAKAALPALKASGGSMIFTLSNSSFYPGGGGPLYTASKHAVVGLVRQLAYELAPKIR 179

Query: 221 VTIVTPGFIESEL 233
           V  V PG   ++L
Sbjct: 180 VNGVAPGGTVTDL 192

Length = 263

>gnl|CDD|181324 PRK08251, PRK08251, short chain dehydrogenase; Provisional

 Score =  103 bits (260), Expect = 6e-27
 Identities = 64/199 (32%), Positives = 96/199 (48%), Gaps = 17/199 (8%)

Query: 48  KVVIITGASSGIGEHLAYEYARRGACLALCARREKSLEEVADTAREIGSPDV-ITIRA-D 105
           + ++ITGASSG+G  +A E+A +G  LALCARR   LEE+         P + + + A D
Sbjct: 3   QKILITGASSGLGAGMAREFAAKGRDLALCARRTDRLEELKAELLAR-YPGIKVAVAALD 61

Query: 106 VSKVDDCRSLVEETMNHFGRLDHLVNNAGISSVA-----LFEDIVNITDFKQIMNINFWG 160
           V+  D    +  E  +  G LD ++ NAGI   A      F    N    K     NF  
Sbjct: 62  VNDHDQVFEVFAEFRDELGGLDRVIVNAGIGKGARLGTGKFW--AN----KATAETNFVA 115

Query: 161 SVYTTRFAVPHLRYT-KGKIVVLSSAASWLTAPR-MSFYNASKAALVLFFETLRVEL-GS 217
           ++     A+   R    G +V++SS ++    P   + Y ASKA +    E LR EL  +
Sbjct: 116 ALAQCEAAMEIFREQGSGHLVLISSVSAVRGLPGVKAAYAASKAGVASLGEGLRAELAKT 175

Query: 218 DVGVTIVTPGFIESELTQG 236
            + V+ + PG+I SE+   
Sbjct: 176 PIKVSTIEPGYIRSEMNAK 194

Length = 248

>gnl|CDD|235816 PRK06500, PRK06500, short chain dehydrogenase; Provisional

 Score =  103 bits (260), Expect = 7e-27
 Identities = 63/189 (33%), Positives = 91/189 (48%), Gaps = 9/189 (4%)

Query: 47  GKVVIITGASSGIGEHLAYEYARRGACLALCARREKSLEEVADTAREIGSPDVITIRADV 106
           GK  +ITG +SGIG   A ++   GA +A+  R   SLE     AR       + IRAD 
Sbjct: 6   GKTALITGGTSGIGLETARQFLAEGARVAITGRDPASLEA----ARAELGESALVIRADA 61

Query: 107 SKVDDCRSLVEETMNHFGRLDHLVNNAGISSVALFEDIVNITDFKQIMNINFWGSVYTTR 166
             V   ++L +     FGRLD +  NAG++  A  ED  +   F +  N N  G  +  +
Sbjct: 62  GDVAAQKALAQALAEAFGRLDAVFINAGVAKFAPLED-WDEAMFDRSFNTNVKGPYFLIQ 120

Query: 167 FAVPHLRYTKGKIVVL-SSAASWLTAPRMSFYNASKAALVLFFETLRVEL-GSDVGVTIV 224
             +P L       +VL  S  + +  P  S Y ASKAAL+   +TL  EL    + V  V
Sbjct: 121 ALLPLL--ANPASIVLNGSINAHIGMPNSSVYAASKAALLSLAKTLSGELLPRGIRVNAV 178

Query: 225 TPGFIESEL 233
           +PG +++ L
Sbjct: 179 SPGPVQTPL 187

Length = 249

>gnl|CDD|187601 cd05343, Mgc4172-like_SDR_c, human Mgc4172-like, classical (c) SDRs

 Score =  103 bits (259), Expect = 8e-27
 Identities = 51/198 (25%), Positives = 88/198 (44%), Gaps = 9/198 (4%)

Query: 43  EDVSGKVVIITGASSGIGEHLAYEYARRGACLALCARREKSLEEVADTAREIGSPDVITI 102
           E   G+V ++TGAS GIG  +A    + G  +  CARR   +E +A   +  G P +   
Sbjct: 2   ERWRGRVALVTGASVGIGAAVARALVQHGMKVVGCARRVDKIEALAAECQSAGYPTLFPY 61

Query: 103 RADVSKVDDCRSLVEETMNHFGRLDHLVNNAGISSVALFEDIVNITDFKQIMNINFWGSV 162
           + D+S  +   S+          +D  +NNAG++             +K++ ++N     
Sbjct: 62  QCDLSNEEQILSMFSAIRTQHQGVDVCINNAGLARPEPLLS-GKTEGWKEMFDVNVLALS 120

Query: 163 YTTRFAVPHLRYTK---GKIVVLSSAA--SWLTAPRMSFYNASKAALVLFFETLRVEL-- 215
             TR A   ++      G I+ ++S +           FY A+K A+    E LR EL  
Sbjct: 121 ICTREAYQSMKERNVDDGHIININSMSGHRVPPVSVFHFYAATKHAVTALTEGLRQELRE 180

Query: 216 -GSDVGVTIVTPGFIESE 232
             + +  T ++PG +E+E
Sbjct: 181 AKTHIRATSISPGLVETE 198

Human Mgc4172-like proteins, putative SDRs. These proteins are members of the SDR family, with a canonical active site tetrad and a typical Gly-rich NAD-binding motif. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold (alpha/beta folding pattern with a central beta-sheet), an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Classical SDRs are typically about 250 residues long, while extended SDRs are approximately 350 residues. Sequence identity between different SDR enzymes are typically in the 15-30% range, but the enzymes share the Rossmann fold NAD-binding motif and characteristic NAD-binding and catalytic sequence patterns. These enzymes catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase (15-PGDH) numbering). In addition to the Tyr and Lys, there is often an upstream Ser (Ser-138, 15-PGDH numbering) and/or an Asn (Asn-107, 15-PGDH numbering) contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. Extended SDRs have additional elements in the C-terminal region, and typically have a TGXXGXXG cofactor binding motif. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid synthase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type ketoacyl reductases have a TGXXXGX(1-2)G NAD(P)-binding motif. Some atypical SDRs have lost catalytic activity and/or have an unusual NAD(P)-binding motif and missing or unusual active site residues. Reactions catalyzed within the SDR family include isomerization, decarboxylation, epimerization, C=N bond reduction, dehydratase activity, dehalogenation, Enoyl-CoA reduction, and carbonyl-alcohol oxidoreduction. Length = 250

>gnl|CDD|235853 PRK06701, PRK06701, short chain dehydrogenase; Provisional

 Score =  103 bits (260), Expect = 1e-26
 Identities = 59/191 (30%), Positives = 90/191 (47%), Gaps = 10/191 (5%)

Query: 42  SEDVSGKVVIITGASSGIGEHLAYEYARRGACLALCARREKSLEEVADTAREIGSPDV-- 99
           S  + GKV +ITG  SGIG  +A  +A+ GA +A+    E   E+  +T + +    V  
Sbjct: 41  SGKLKGKVALITGGDSGIGRAVAVLFAKEGADIAIVYLDEH--EDANETKQRVEKEGVKC 98

Query: 100 ITIRADVSKVDDCRSLVEETMNHFGRLDHLVNNAGISSVALFEDIVNITD--FKQIMNIN 157
           + I  DVS    C+  VEET+   GRLD LVNNA        + + +IT     +    N
Sbjct: 99  LLIPGDVSDEAFCKDAVEETVRELGRLDILVNNAAFQYPQ--QSLEDITAEQLDKTFKTN 156

Query: 158 FWGSVYTTRFAVPHLRYTKGKIVVLSSAASWLTAPRMSFYNASKAALVLFFETLRVELGS 217
            +   + T+ A+PHL+     I+   S   +     +  Y+A+K A+  F  +L   L  
Sbjct: 157 IYSYFHMTKAALPHLK-QGSAIINTGSITGYEGNETLIDYSATKGAIHAFTRSLAQSLVQ 215

Query: 218 D-VGVTIVTPG 227
             + V  V PG
Sbjct: 216 KGIRVNAVAPG 226

Length = 290

>gnl|CDD|235725 PRK06179, PRK06179, short chain dehydrogenase; Provisional

 Score =  103 bits (258), Expect = 2e-26
 Identities = 60/190 (31%), Positives = 95/190 (50%), Gaps = 20/190 (10%)

Query: 46  SGKVVIITGASSGIGEHLAYEYARRGACLALCARREKSLEEVADTAREIG----SPDVIT 101
           + KV ++TGASSGIG   A + AR G               V  T+R        P V  
Sbjct: 3   NSKVALVTGASSGIGRATAEKLARAGY-------------RVFGTSRNPARAAPIPGVEL 49

Query: 102 IRADVSKVDDCRSLVEETMNHFGRLDHLVNNAGISSVALFEDIVNITDFKQIMNINFWGS 161
           +  DV+     ++ V+E +   GR+D LVNNAG+      E+  +I   + + + N +G 
Sbjct: 50  LELDVTDDASVQAAVDEVIARAGRIDVLVNNAGVGLAGAAEE-SSIAQAQALFDTNVFGI 108

Query: 162 VYTTRFAVPHLRYTK-GKIVVLSSAASWLTAPRMSFYNASKAALVLFFETLRVELGS-DV 219
           +  TR  +PH+R    G+I+ +SS   +L AP M+ Y ASK A+  + E+L  E+    +
Sbjct: 109 LRMTRAVLPHMRAQGSGRIINISSVLGFLPAPYMALYAASKHAVEGYSESLDHEVRQFGI 168

Query: 220 GVTIVTPGFI 229
            V++V P + 
Sbjct: 169 RVSLVEPAYT 178

Length = 270

>gnl|CDD|187603 cd05345, BKR_3_SDR_c, putative beta-ketoacyl acyl carrier protein [ACP] reductase (BKR), subgroup 3, classical (c) SDR

 Score =  102 bits (256), Expect = 2e-26
 Identities = 63/182 (34%), Positives = 97/182 (53%), Gaps = 6/182 (3%)

Query: 47  GKVVIITGASSGIGEHLAYEYARRGACLALCARREKSLEEVADTAREIGSPDVITIRADV 106
           GKV I+TGA SG GE +A  +A+ GA + +        E VA    +IG    I I+ADV
Sbjct: 5   GKVAIVTGAGSGFGEGIARRFAQEGARVVIADINADGAERVA---ADIG-EAAIAIQADV 60

Query: 107 SKVDDCRSLVEETMNHFGRLDHLVNNAGISSVALFEDIVNITDFKQIMNINFWGSVYTTR 166
           +K  D  ++VE  ++ FGRLD LVNNAGI+        V+  +F ++  +N      + +
Sbjct: 61  TKRADVEAMVEAALSKFGRLDILVNNAGITHRNKPMLEVDEEEFDRVFAVNVKSIYLSAQ 120

Query: 167 FAVPHLRYTK-GKIVVLSSAASWLTAPRMSFYNASKAALVLFFETLRVELG-SDVGVTIV 224
             VPH+     G I+ ++S A     P +++YNASK  +V   + + VEL   ++ V  +
Sbjct: 121 ALVPHMEEQGGGVIINIASTAGLRPRPGLTWYNASKGWVVTATKAMAVELAPRNIRVNCL 180

Query: 225 TP 226
            P
Sbjct: 181 CP 182

This subgroup includes the putative Brucella melitensis biovar Abortus 2308 BKR, FabG, Mesorhizobium loti MAFF303099 FabG, and other classical SDRs. BKR, a member of the SDR family, catalyzes the NADPH-dependent reduction of acyl carrier protein in the first reductive step of de novo fatty acid synthesis (FAS). FAS consists of 4 elongation steps, which are repeated to extend the fatty acid chain thru the addition of two-carbo units from malonyl acyl-carrier protein (ACP): condensation, reduction, dehydration, and final reduction. Type II FAS, typical of plants and many bacteria, maintains these activities on discrete polypeptides, while type I Fas utilizes one or 2 multifunctional polypeptides. BKR resembles enoyl reductase, which catalyzes the second reduction step in FAS. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold (alpha/beta folding pattern with a central beta-sheet), an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Classical SDRs are typically about 250 residues long, while extended SDRS are approximately 350 residues. Sequence identity between different SDR enzymes are typically in the 15-30% range, but the enzymes share the Rossmann fold NAD-binding motif and characteristic NAD-binding and catalytic sequence patterns. These enzymes have a 3-glycine N-terminal NAD(P)(H)-binding pattern (typically, TGxxxGxG in classical SDRs and TGxxGxxG in extended SDRs), while substrate binding is in the C-terminal region. A critical catalytic Tyr residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase (15-PGDH) numbering), is often found in a conserved YXXXK pattern. In addition to the Tyr and Lys, there is often an upstream Ser (Ser-138, 15-PGDH numbering) and/or an Asn (Asn-107, 15-PGDH numbering) or additional Ser, contributing to the active site. Substrates for these enzymes include sugars, steroids, alcohols, and aromatic compounds. The standard reaction mechanism is a proton relay involving the conserved Tyr and Lys, as well as Asn (or Ser). Some SDR family members, including 17 beta-hydroxysteroid dehydrogenase contain an additional helix-turn-helix motif that is not generally found among SDRs. Length = 248

>gnl|CDD|135631 PRK05867, PRK05867, short chain dehydrogenase; Provisional

 Score =  102 bits (256), Expect = 2e-26
 Identities = 63/197 (31%), Positives = 110/197 (55%), Gaps = 7/197 (3%)

Query: 44  DVSGKVVIITGASSGIGEHLAYEYARRGACLALCARREKSLEEVADTAREIGSPDVITIR 103
           D+ GK  +ITGAS+GIG+ +A  Y   GA +A+ AR   +LE++AD     G   V+ + 
Sbjct: 6   DLHGKRALITGASTGIGKRVALAYVEAGAQVAIAARHLDALEKLADEIGTSGG-KVVPVC 64

Query: 104 ADVSKVDDCRSLVEETMNHFGRLDHLVNNAGISSVALFEDIVNITDFKQIMNINFWGSVY 163
            DVS+     S++++     G +D  V NAGI +V    D+  + +F+++ N N  G   
Sbjct: 65  CDVSQHQQVTSMLDQVTAELGGIDIAVCNAGIITVTPMLDM-PLEEFQRLQNTNVTGVFL 123

Query: 164 TTRFAV-PHLRYTKGKIVVLSSAASW--LTAP-RMSFYNASKAALVLFFETLRVELGS-D 218
           T + A    ++  +G +++ +++ S   +  P ++S Y ASKAA++   + + VEL    
Sbjct: 124 TAQAAAKAMVKQGQGGVIINTASMSGHIINVPQQVSHYCASKAAVIHLTKAMAVELAPHK 183

Query: 219 VGVTIVTPGFIESELTQ 235
           + V  V+PG+I +EL +
Sbjct: 184 IRVNSVSPGYILTELVE 200

Length = 253

>gnl|CDD|181077 PRK07677, PRK07677, short chain dehydrogenase; Provisional

 Score =  101 bits (254), Expect = 4e-26
 Identities = 60/190 (31%), Positives = 100/190 (52%), Gaps = 10/190 (5%)

Query: 47  GKVVIITGASSGIGEHLAYEYARRGACLALCARREKSLEEVADTAREIGSPD--VITIRA 104
            KVVIITG SSG+G+ +A  +A  GA + +  R ++ LEE      EI      V+T++ 
Sbjct: 1   EKVVIITGGSSGMGKAMAKRFAEEGANVVITGRTKEKLEE---AKLEIEQFPGQVLTVQM 57

Query: 105 DVSKVDDCRSLVEETMNHFGRLDHLVNNAGISSVALFEDIVNITDFKQIMNINFWGSVYT 164
           DV   +D + +VE+    FGR+D L+NNA  + +   ED+ ++  +  +++I   G+ Y 
Sbjct: 58  DVRNPEDVQKMVEQIDEKFGRIDALINNAAGNFICPAEDL-SVNGWNSVIDIVLNGTFYC 116

Query: 165 TRFAVPHL--RYTKGKIVVLSSAASWLTAPRMSFYNASKAALVLFFETLRVELGSDVG-- 220
           ++    +   +  KG I+ + +  +W   P +    A+KA ++    TL VE G   G  
Sbjct: 117 SQAVGKYWIEKGIKGNIINMVATYAWDAGPGVIHSAAAKAGVLAMTRTLAVEWGRKYGIR 176

Query: 221 VTIVTPGFIE 230
           V  + PG IE
Sbjct: 177 VNAIAPGPIE 186

Length = 252

>gnl|CDD|187647 cd08943, R1PA_ADH_SDR_c, rhamnulose-1-phosphate aldolase/alcohol dehydrogenase, classical (c) SDRs

 Score =  101 bits (253), Expect = 6e-26
 Identities = 56/183 (30%), Positives = 94/183 (51%), Gaps = 6/183 (3%)

Query: 47  GKVVIITGASSGIGEHLAYEYARRGACLALCARREKSLEEVADTAREIGSPDVITIRADV 106
           GKV ++TG +SGIG  +A   A  GA + +     +  E+VA+ A+  G P  + ++ DV
Sbjct: 1   GKVALVTGGASGIGLAIAKRLAAEGAAVVVADIDPEIAEKVAEAAQ--GGPRALGVQCDV 58

Query: 107 SKVDDCRSLVEETMNHFGRLDHLVNNAGISSVALFEDIVNITDFKQIMNINFWGSVYTTR 166
           +     +S  E+ +  FG LD +V+NAGI++ +   +  ++ D+ + M+IN  G    +R
Sbjct: 59  TSEAQVQSAFEQAVLEFGGLDIVVSNAGIATSSPIAE-TSLEDWNRSMDINLTGHFLVSR 117

Query: 167 FAVPHLRYTK--GKIVVLSSAASWLTAPRMSFYNASKAALVLFFETLRVELGSD-VGVTI 223
            A   ++     G IV  +S  +    P  + Y+A+KAA       L +E G D + V  
Sbjct: 118 EAFRIMKSQGIGGNIVFNASKNAVAPGPNAAAYSAAKAAEAHLARCLALEGGEDGIRVNT 177

Query: 224 VTP 226
           V P
Sbjct: 178 VNP 180

This family has bifunctional proteins with an N-terminal aldolase and a C-terminal classical SDR domain. One member is identified as a rhamnulose-1-phosphate aldolase/alcohol dehydrogenase. The SDR domain has a canonical SDR glycine-rich NAD(P) binding motif and a match to the characteristic active site triad. However, it lacks an upstream active site Asn typical of SDRs. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold (alpha/beta folding pattern with a central beta-sheet), an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Classical SDRs are typically about 250 residues long, while extended SDRs are approximately 350 residues. Sequence identity between different SDR enzymes are typically in the 15-30% range, but the enzymes share the Rossmann fold NAD-binding motif and characteristic NAD-binding and catalytic sequence patterns. These enzymes catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase (15-PGDH) numbering). In addition to the Tyr and Lys, there is often an upstream Ser (Ser-138, 15-PGDH numbering) and/or an Asn (Asn-107, 15-PGDH numbering) contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. Extended SDRs have additional elements in the C-terminal region, and typically have a TGXXGXXG cofactor binding motif. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid synthase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type ketoacyl reductases have a TGXXXGX(1-2)G NAD(P)-binding motif. Some atypical SDRs have lost catalytic activity and/or have an unusual NAD(P)-binding motif and missing or unusual active site residues. Reactions catalyzed within the SDR family include isomerization, decarboxylation, epimerization, C=N bond reduction, dehydratase activity, dehalogenation, Enoyl-CoA reduction, and carbonyl-alcohol oxidoreduction. Length = 250

>gnl|CDD|212492 cd05327, retinol-DH_like_SDR_c_like, retinol dehydrogenase (retinol-DH), Light dependent Protochlorophyllide (Pchlide) OxidoReductase (LPOR) and related proteins, classical (c) SDRs

 Score =  101 bits (254), Expect = 8e-26
 Identities = 69/205 (33%), Positives = 94/205 (45%), Gaps = 22/205 (10%)

Query: 47  GKVVIITGASSGIGEHLAYEYARRGACLALCARREKSLEEVADT-AREIGSPDVITIRAD 105
           GKVV+ITGA+SGIG+  A E A+RGA + +  R E+  EE A    +E G+  V  I+ D
Sbjct: 1   GKVVVITGANSGIGKETARELAKRGAHVIIACRNEEKGEEAAAEIKKETGNAKVEVIQLD 60

Query: 106 VSKVDDCRSLVEETMNHFGRLDHLVNNAGISSVALFEDIVNITDFKQIMNINFWGSVYTT 165
           +S +   R   EE +  F RLD L+NNAGI +              Q   +N+ G    T
Sbjct: 61  LSSLASVRQFAEEFLARFPRLDILINNAGIMAPPRRLTKDGFE--LQFA-VNYLGHFLLT 117

Query: 166 RFAVPHLRYTKGK-IVVLSSAA-----------SWLTAPRMS---FYNASKAALVLFFET 210
              +P L+ +    IV +SS A                   S    Y  SK A +LF   
Sbjct: 118 NLLLPVLKASAPSRIVNVSSIAHRAGPIDFNDLDLENNKEYSPYKAYGQSKLANILFTRE 177

Query: 211 LRVELGSDVGVTIV--TPGFIESEL 233
           L   L    GVT+    PG + +EL
Sbjct: 178 LARRLEGT-GVTVNALHPGVVRTEL 201

Classical SDR subgroup containing retinol-DHs, LPORs, and related proteins. Retinol is processed by a medium chain alcohol dehydrogenase followed by retinol-DHs. Pchlide reductases act in chlorophyll biosynthesis. There are distinct enzymes that catalyze Pchlide reduction in light or dark conditions. Light-dependent reduction is via an NADP-dependent SDR, LPOR. Proteins in this subfamily share the glycine-rich NAD-binding motif of the classical SDRs, have a partial match to the canonical active site tetrad, but lack the typical active site Ser. This subgroup includes the human proteins: retinol dehydrogenase -12, -13 ,and -14, dehydrogenase/reductase SDR family member (DHRS)-12 , -13 and -X (a DHRS on chromosome X), and WWOX (WW domain-containing oxidoreductase), as well as a Neurospora crassa SDR encoded by the blue light inducible bli-4 gene. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold (alpha/beta folding pattern with a central beta-sheet), an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Classical SDRs are typically about 250 residues long, while extended SDRs are approximately 350 residues. Sequence identity between different SDR enzymes are typically in the 15-30% range, but the enzymes share the Rossmann fold NAD-binding motif and characteristic NAD-binding and catalytic sequence patterns. These enzymes catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase (15-PGDH) numbering). In addition to the Tyr and Lys, there is often an upstream Ser (Ser-138, 15-PGDH numbering) and/or an Asn (Asn-107, 15-PGDH numbering) contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. Extended SDRs have additional elements in the C-terminal region, and typically have a TGXXGXXG cofactor binding motif. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid synthase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type ketoacyl reductases have a TGXXXGX(1-2)G NAD(P)-binding motif. Some atypical SDRs have lost catalytic activity and/or have an unusual NAD(P)-binding motif and missing or unusual active site residues. Reactions catalyzed within the SDR family include isomerization, decarboxylation, epimerization, C=N bond reduction, dehydratase activity, dehalogenation, Enoyl-CoA reduction, and carbonyl-alcohol oxidoreduction. Length = 269

>gnl|CDD|180448 PRK06182, PRK06182, short chain dehydrogenase; Validated

 Score =  100 bits (251), Expect = 2e-25
 Identities = 63/189 (33%), Positives = 103/189 (54%), Gaps = 14/189 (7%)

Query: 48  KVVIITGASSGIGEHLAYEYARRGACLALCARREKSLEEVADTAREIGSPDVITIRADVS 107
           KV ++TGASSGIG+  A   A +G  +   ARR   +E++A          V  +  DV+
Sbjct: 4   KVALVTGASSGIGKATARRLAAQGYTVYGAARRVDKMEDLASLG-------VHPLSLDVT 56

Query: 108 KVDDCRSLVEETMNHFGRLDHLVNNAGISSVALFEDIVNITDFKQIMNINFWGSVYTTRF 167
                ++ V+  +   GR+D LVNNAG  S    ED V I + ++   +N +G+   T+ 
Sbjct: 57  DEASIKAAVDTIIAEEGRIDVLVNNAGYGSYGAIED-VPIDEARRQFEVNLFGAARLTQL 115

Query: 168 AVPHLRYTK-GKIVVLSSAASWLTAPRMSFYNASKAALVLFFETLRVEL---GSDVGVTI 223
            +PH+R  + G+I+ +SS    +  P  ++Y+A+K AL  F + LR+E+   G D  V +
Sbjct: 116 VLPHMRAQRSGRIINISSMGGKIYTPLGAWYHATKFALEGFSDALRLEVAPFGID--VVV 173

Query: 224 VTPGFIESE 232
           + PG I++E
Sbjct: 174 IEPGGIKTE 182

Length = 273

>gnl|CDD|180744 PRK06914, PRK06914, short chain dehydrogenase; Provisional

 Score =  100 bits (251), Expect = 2e-25
 Identities = 58/187 (31%), Positives = 101/187 (54%), Gaps = 9/187 (4%)

Query: 46  SGKVVIITGASSGIGEHLAYEYARRGACLALCARREKSLEEVADTAREIGSPDVITIRA- 104
           + K+ I+TGASSG G     E A++G  +    R  +  E +   A ++     I ++  
Sbjct: 2   NKKIAIVTGASSGFGLLTTLELAKKGYLVIATMRNPEKQENLLSQATQLNLQQNIKVQQL 61

Query: 105 DVSKVDDCRSL--VEETMNHFGRLDHLVNNAGISSVALFEDIVNITDFKQIMNINFWGSV 162
           DV+   D  S+   +  +   GR+D LVNNAG ++    E+I  + ++++    N +G++
Sbjct: 62  DVT---DQNSIHNFQLVLKEIGRIDLLVNNAGYANGGFVEEI-PVEEYRKQFETNVFGAI 117

Query: 163 YTTRFAVPHLRYTK-GKIVVLSSAASWLTAPRMSFYNASKAALVLFFETLRVELGS-DVG 220
             T+  +P++R  K GKI+ +SS +  +  P +S Y +SK AL  F E+LR+EL    + 
Sbjct: 118 SVTQAVLPYMRKQKSGKIINISSISGRVGFPGLSPYVSSKYALEGFSESLRLELKPFGID 177

Query: 221 VTIVTPG 227
           V ++ PG
Sbjct: 178 VALIEPG 184

Length = 280

>gnl|CDD|237188 PRK12745, PRK12745, 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional

 Score = 99.7 bits (249), Expect = 3e-25
 Identities = 54/200 (27%), Positives = 91/200 (45%), Gaps = 13/200 (6%)

Query: 48  KVVIITGASSGIGEHLAYEYARRGACLALCARR-EKSLEEVADTAREIGSPDVITIRADV 106
            V ++TG   GIG  +A   A  G  LA+  R  ++ L       R +G   VI   ADV
Sbjct: 3   PVALVTGGRRGIGLGIARALAAAGFDLAINDRPDDEELAATQQELRALGVE-VIFFPADV 61

Query: 107 SKVDDCRSLVEETMNHFGRLDHLVNNAGISSVALFEDIVNIT--DFKQIMNINFWGSVYT 164
           + +    ++++     +GR+D LVNNAG+       D++++T   F +++ IN  G  + 
Sbjct: 62  ADLSAHEAMLDAAQAAWGRIDCLVNNAGVGVKVR-GDLLDLTPESFDRVLAINLRGPFFL 120

Query: 165 TRFAVPHLRYTKGK-------IVVLSSAASWLTAPRMSFYNASKAALVLFFETLRVELG- 216
           T+     +             IV +SS  + + +P    Y  SKA L +  +     L  
Sbjct: 121 TQAVAKRMLAQPEPEELPHRSIVFVSSVNAIMVSPNRGEYCISKAGLSMAAQLFAARLAE 180

Query: 217 SDVGVTIVTPGFIESELTQG 236
             +GV  V PG I++++T  
Sbjct: 181 EGIGVYEVRPGLIKTDMTAP 200

Length = 256

>gnl|CDD|180993 PRK07478, PRK07478, short chain dehydrogenase; Provisional

 Score = 99.2 bits (248), Expect = 3e-25
 Identities = 56/185 (30%), Positives = 90/185 (48%), Gaps = 4/185 (2%)

Query: 46  SGKVVIITGASSGIGEHLAYEYARRGACLALCARREKSLEEVADTAREIGSPDVITIRAD 105
           +GKV IITGASSGIG   A  +AR GA + + ARR+  L+++    R  G  + + +  D
Sbjct: 5   NGKVAIITGASSGIGRAAAKLFAREGAKVVVGARRQAELDQLVAEIRAEGG-EAVALAGD 63

Query: 106 VSKVDDCRSLVEETMNHFGRLDHLVNNAGISSVALFEDIVNITDFKQIMNINFWGSVYTT 165
           V      ++LV   +  FG LD   NNAG          +++  +++ +  N   +    
Sbjct: 64  VRDEAYAKALVALAVERFGGLDIAFNNAGTLGEMGPVAEMSLEGWRETLATNLTSAFLGA 123

Query: 166 RFAVPHLRYTKGKIVVLSSAASWLTA--PRMSFYNASKAALVLFFETLRVELGSD-VGVT 222
           +  +P +    G  ++ +S     TA  P M+ Y ASKA L+   + L  E G+  + V 
Sbjct: 124 KHQIPAMLARGGGSLIFTSTFVGHTAGFPGMAAYAASKAGLIGLTQVLAAEYGAQGIRVN 183

Query: 223 IVTPG 227
            + PG
Sbjct: 184 ALLPG 188

Length = 254

>gnl|CDD|187644 cd08940, HBDH_SDR_c, d-3-hydroxybutyrate dehydrogenase (HBDH), classical (c) SDRs

 Score = 98.7 bits (246), Expect = 7e-25
 Identities = 59/194 (30%), Positives = 94/194 (48%), Gaps = 6/194 (3%)

Query: 46  SGKVVIITGASSGIGEHLAYEYARRGACLALCA-RREKSLEEVADTAREIGSPDVITIRA 104
            GKV ++TG++SGIG  +A   A  GA + L        +E V           V+   A
Sbjct: 1   KGKVALVTGSTSGIGLGIARALAAAGANIVLNGFGDAAEIEAVRAGLAAKHGVKVLYHGA 60

Query: 105 DVSKVDDCRSLVEETMNHFGRLDHLVNNAGISSVALFEDIVNITDFKQIMNINFWGSVYT 164
           D+SK      +V      FG +D LVNNAGI  VA  ED      +  I+ +N     +T
Sbjct: 61  DLSKPAAIEDMVAYAQRQFGGVDILVNNAGIQHVAPIEDF-PTEKWDAIIALNLSAVFHT 119

Query: 165 TRFAVPHLRYTK-GKIVVLSSAASWLTAPRMSFYNASKAALVLFFETLRVELGSDVGVTI 223
           TR A+PH++    G+I+ ++S    + +   S Y A+K  +V   + + +E  +  GVT 
Sbjct: 120 TRLALPHMKKQGWGRIINIASVHGLVASANKSAYVAAKHGVVGLTKVVALE-TAGTGVTC 178

Query: 224 --VTPGFIESELTQ 235
             + PG++ + L +
Sbjct: 179 NAICPGWVLTPLVE 192

DHBDH, an NAD+ -dependent enzyme, catalyzes the interconversion of D-3-hydroxybutyrate and acetoacetate. It is a classical SDR, with the canonical NAD-binding motif and active site tetrad. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold (alpha/beta folding pattern with a central beta-sheet), an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Classical SDRs are typically about 250 residues long, while extended SDRs are approximately 350 residues. Sequence identity between different SDR enzymes are typically in the 15-30% range, but the enzymes share the Rossmann fold NAD-binding motif and characteristic NAD-binding and catalytic sequence patterns. These enzymes catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase (15-PGDH) numbering). In addition to the Tyr and Lys, there is often an upstream Ser (Ser-138, 15-PGDH numbering) and/or an Asn (Asn-107, 15-PGDH numbering) contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. Extended SDRs have additional elements in the C-terminal region, and typically have a TGXXGXXG cofactor binding motif. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid synthase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type ketoacyl reductases have a TGXXXGX(1-2)G NAD(P)-binding motif. Some atypical SDRs have lost catalytic activity and/or have an unusual NAD(P)-binding motif and missing or unusual active site residues. Reactions catalyzed within the SDR family include isomerization, decarboxylation, epimerization, C=N bond reduction, dehydratase activity, dehalogenation, Enoyl-CoA reduction, and carbonyl-alcohol oxidoreduction. Length = 258

>gnl|CDD|187634 cd08929, SDR_c4, classical (c) SDR, subgroup 4

 Score = 98.0 bits (244), Expect = 8e-25
 Identities = 60/189 (31%), Positives = 85/189 (44%), Gaps = 11/189 (5%)

Query: 48  KVVIITGASSGIGEHLAYEYARRGACLALCARREKSLEEVADTAREIGSPDVITIRADVS 107
           K  ++TGAS GIGE  A      G  + +CAR E  L   A    E     V+ +  DV 
Sbjct: 1   KAALVTGASRGIGEATARLLHAEGYRVGICARDEARLAAAAAQELE----GVLGLAGDVR 56

Query: 108 KVDDCRSLVEETMNHFGRLDHLVNNAGISSVALFEDIVNITDFKQIMNI--NFWGSVYTT 165
              D R  V+     FG LD LVNNAG   V + + +  +T  +  + +  N  G+ Y  
Sbjct: 57  DEADVRRAVDAMEEAFGGLDALVNNAG---VGVMKPVEELTPEEWRLVLDTNLTGAFYCI 113

Query: 166 RFAVPH-LRYTKGKIVVLSSAASWLTAPRMSFYNASKAALVLFFETLRVELGS-DVGVTI 223
             A P  LR   G IV + S A        + YNASK  L+   E   ++L   ++ V  
Sbjct: 114 HKAAPALLRRGGGTIVNVGSLAGKNAFKGGAAYNASKFGLLGLSEAAMLDLREANIRVVN 173

Query: 224 VTPGFIESE 232
           V PG +++ 
Sbjct: 174 VMPGSVDTG 182

This subgroup has a canonical active site tetrad and a typical Gly-rich NAD-binding motif. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold (alpha/beta folding pattern with a central beta-sheet), an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Classical SDRs are typically about 250 residues long, while extended SDRs are approximately 350 residues. Sequence identity between different SDR enzymes are typically in the 15-30% range, but the enzymes share the Rossmann fold NAD-binding motif and characteristic NAD-binding and catalytic sequence patterns. These enzymes catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase (15-PGDH) numbering). In addition to the Tyr and Lys, there is often an upstream Ser (Ser-138, 15-PGDH numbering) and/or an Asn (Asn-107, 15-PGDH numbering) contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. Extended SDRs have additional elements in the C-terminal region, and typically have a TGXXGXXG cofactor binding motif. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid synthase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type ketoacyl reductases have a TGXXXGX(1-2)G NAD(P)-binding motif. Some atypical SDRs have lost catalytic activity and/or have an unusual NAD(P)-binding motif and missing or unusual active site residues. Reactions catalyzed within the SDR family include isomerization, decarboxylation, epimerization, C=N bond reduction, dehydratase activity, dehalogenation, Enoyl-CoA reduction, and carbonyl-alcohol oxidoreduction. Length = 226

>gnl|CDD|171821 PRK12937, PRK12937, short chain dehydrogenase; Provisional

 Score = 98.3 bits (245), Expect = 8e-25
 Identities = 64/190 (33%), Positives = 91/190 (47%), Gaps = 5/190 (2%)

Query: 46  SGKVVIITGASSGIGEHLAYEYARRGACLALC-ARREKSLEEVADTAREIGSPDVITIRA 104
           S KV I+TGAS GIG  +A   A  G  +A+  A    + +E+       G    I ++A
Sbjct: 4   SNKVAIVTGASRGIGAAIARRLAADGFAVAVNYAGSAAAADELVAEIEAAGG-RAIAVQA 62

Query: 105 DVSKVDDCRSLVEETMNHFGRLDHLVNNAGISSVALFEDIVNITDFKQIMNINFWGSVYT 164
           DV+       L +     FGR+D LVNNAG+  +    D  ++ DF + +  N  G+   
Sbjct: 63  DVADAAAVTRLFDAAETAFGRIDVLVNNAGVMPLGTIADF-DLEDFDRTIATNLRGAFVV 121

Query: 165 TRFAVPHLRYTKGKIVVLSSAASWLTAPRMSFYNASKAALVLFFETLRVEL-GSDVGVTI 223
            R A  HL    G+I+ LS++   L  P    Y ASKAA+      L  EL G  + V  
Sbjct: 122 LREAARHLG-QGGRIINLSTSVIALPLPGYGPYAASKAAVEGLVHVLANELRGRGITVNA 180

Query: 224 VTPGFIESEL 233
           V PG + +EL
Sbjct: 181 VAPGPVATEL 190

Length = 245

>gnl|CDD|187624 cd05366, meso-BDH-like_SDR_c, meso-2,3-butanediol dehydrogenase-like, classical (c) SDRs

 Score = 98.2 bits (245), Expect = 1e-24
 Identities = 58/193 (30%), Positives = 95/193 (49%), Gaps = 8/193 (4%)

Query: 46  SGKVVIITGASSGIGEHLAYEYARRGACLALCA-RREKSLEEVADTAREIGSPDVITIRA 104
             KV IITGA+ GIG  +A   A  G  + L     E++ +       E G  + + + A
Sbjct: 1   MSKVAIITGAAQGIGRAIAERLAADGFNIVLADLNLEEAAKSTIQEISEAGY-NAVAVGA 59

Query: 105 DVSKVDDCRSLVEETMNHFGRLDHLVNNAGISSVALFEDIVNITDFKQIMNINFWGSVYT 164
           DV+  DD  +L+++ +  FG  D +VNNAGI+ +     I    D K++  +N +G ++ 
Sbjct: 60  DVTDKDDVEALIDQAVEKFGSFDVMVNNAGIAPITPLLTITE-EDLKKVYAVNVFGVLFG 118

Query: 165 TRFAVPHLRY--TKGKIVVLSSAASWLTAPRMSFYNASKAALVLFFETLRVELGSDVGVT 222
            + A    +     GKI+  SS A     P +  Y+ASK A+    +T   EL    G+T
Sbjct: 119 IQAAARQFKKLGHGGKIINASSIAGVQGFPNLGAYSASKFAVRGLTQTAAQELAPK-GIT 177

Query: 223 I--VTPGFIESEL 233
           +    PG +++E+
Sbjct: 178 VNAYAPGIVKTEM 190

2,3-butanediol dehydrogenases (BDHs) catalyze the NAD+ dependent conversion of 2,3-butanediol to acetonin; BDHs are classified into types according to their stereospecificity as to substrates and products. Included in this subgroup are Klebsiella pneumonia meso-BDH which catalyzes meso-2,3-butanediol to D(-)-acetonin, and Corynebacterium glutamicum L-BDH which catalyzes lX+)-2,3-butanediol to L(+)-acetonin. This subgroup is comprised of classical SDRs with the characteristic catalytic triad and NAD-binding motif. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold (alpha/beta folding pattern with a central beta-sheet), an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Classical SDRs are typically about 250 residues long, while extended SDRs are approximately 350 residues. Sequence identity between different SDR enzymes are typically in the 15-30% range, but the enzymes share the Rossmann fold NAD-binding motif and characteristic NAD-binding and catalytic sequence patterns. These enzymes catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase (15-PGDH) numbering). In addition to the Tyr and Lys, there is often an upstream Ser (Ser-138, 15-PGDH numbering) and/or an Asn (Asn-107, 15-PGDH numbering) contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. Extended SDRs have additional elements in the C-terminal region, and typically have a TGXXGXXG cofactor binding motif. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid synthase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type ketoacyl reductases have a TGXXXGX(1-2)G NAD(P)-binding motif. Some atypical SDRs have lost catalytic activity and/or have an unusual NAD(P)-binding motif and missing or unusual active site residues. Reactions catalyzed within the SDR family include isomerization, decarboxylation, epimerization, C=N bond reduction, dehydratase activity, dehalogenation, Enoyl-CoA reduction, and carbonyl-alcohol oxidoreduction. Length = 257

>gnl|CDD|187606 cd05348, BphB-like_SDR_c, cis-biphenyl-2,3-dihydrodiol-2,3-dehydrogenase (BphB)-like, classical (c) SDRs

 Score = 98.2 bits (245), Expect = 1e-24
 Identities = 57/193 (29%), Positives = 94/193 (48%), Gaps = 12/193 (6%)

Query: 47  GKVVIITGASSGIGEHLAYEYARRGACLALCARREKSLEEVADTAREIGSPDVITIRADV 106
           G+V +ITG  SG+G  L   +   GA +A+    ++S E+VA+   + G   V+ +  DV
Sbjct: 4   GEVALITGGGSGLGRALVERFVAEGAKVAVL---DRSAEKVAELRADFGD-AVVGVEGDV 59

Query: 107 SKVDDCRSLVEETMNHFGRLDHLVNNAGISSVALFEDIVNITD------FKQIMNINFWG 160
             + D    V   +  FG+LD  + NAGI   +    +V+I +      F ++ +IN  G
Sbjct: 60  RSLADNERAVARCVERFGKLDCFIGNAGIWDYST--SLVDIPEEKLDEAFDELFHINVKG 117

Query: 161 SVYTTRFAVPHLRYTKGKIVVLSSAASWLTAPRMSFYNASKAALVLFFETLRVELGSDVG 220
            +   + A+P L  T+G ++   S A +        Y ASK A+V   + L  EL   + 
Sbjct: 118 YILGAKAALPALYATEGSVIFTVSNAGFYPGGGGPLYTASKHAVVGLVKQLAYELAPHIR 177

Query: 221 VTIVTPGFIESEL 233
           V  V PG + ++L
Sbjct: 178 VNGVAPGGMVTDL 190

cis-biphenyl-2,3-dihydrodiol-2,3-dehydrogenase (BphB) is a classical SDR, it is of particular importance for its role in the degradation of biphenyl/polychlorinated biphenyls(PCBs); PCBs are a significant source of environmental contamination. This subgroup also includes Pseudomonas putida F1 cis-biphenyl-1,2-dihydrodiol-1,2-dehydrogenase (aka cis-benzene glycol dehydrogenase, encoded by the bnzE gene), which participates in benzene metabolism. In addition it includes Pseudomonas sp. C18 putative 1,2-dihydroxy-1,2-dihydronaphthalene dehydrogenase (aka dibenzothiophene dihydrodiol dehydrogenase, encoded by the doxE gene) which participates in an upper naphthalene catabolic pathway. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold (alpha/beta folding pattern with a central beta-sheet), an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Classical SDRs are typically about 250 residues long, while extended SDRs are approximately 350 residues. Sequence identity between different SDR enzymes are typically in the 15-30% range, but the enzymes share the Rossmann fold NAD-binding motif and characteristic NAD-binding and catalytic sequence patterns. These enzymes catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase (15-PGDH) numbering). In addition to the Tyr and Lys, there is often an upstream Ser (Ser-138, 15-PGDH numbering) and/or an Asn (Asn-107, 15-PGDH numbering) contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. Extended SDRs have additional elements in the C-terminal region, and typically have a TGXXGXXG cofactor binding motif. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid synthase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type ketoacyl reductases have a TGXXXGX(1-2)G NAD(P)-binding motif. Some atypical SDRs have lost catalytic activity and/or have an unusual NAD(P)-binding motif and missing or unusual active site residues. Reactions catalyzed within the SDR family include isomerization, decarboxylation, epimerization, C=N bond reduction, dehydratase activity, dehalogenation, Enoyl-CoA reduction, and carbonyl-alcohol oxidoreduction. Length = 257

>gnl|CDD|236372 PRK09072, PRK09072, short chain dehydrogenase; Provisional

 Score = 98.1 bits (245), Expect = 1e-24
 Identities = 60/186 (32%), Positives = 89/186 (47%), Gaps = 8/186 (4%)

Query: 44  DVSGKVVIITGASSGIGEHLAYEYARRGACLALCARREKSLEEVADTAREIGSPD-VITI 102
           D+  K V++TGAS GIG+ LA   A  GA L L  R  + LE +   A  +  P     +
Sbjct: 2   DLKDKRVLLTGASGGIGQALAEALAAAGARLLLVGRNAEKLEAL---AARLPYPGRHRWV 58

Query: 103 RADVSKVDDCRSLVEETMNHFGRLDHLVNNAGISSVALFEDIVNITDFKQIMNINFWGSV 162
            AD++     R  V       G ++ L+NNAG++  AL ED  +    ++++ +N    +
Sbjct: 59  VADLTSEAG-REAVLARAREMGGINVLINNAGVNHFALLEDQ-DPEAIERLLALNLTAPM 116

Query: 163 YTTRFAVPHLRY-TKGKIVVLSSAASWLTAPRMSFYNASKAALVLFFETLRVEL-GSDVG 220
             TR  +P LR      +V + S    +  P  + Y ASK AL  F E LR EL  + V 
Sbjct: 117 QLTRALLPLLRAQPSAMVVNVGSTFGSIGYPGYASYCASKFALRGFSEALRRELADTGVR 176

Query: 221 VTIVTP 226
           V  + P
Sbjct: 177 VLYLAP 182

Length = 263

>gnl|CDD|235924 PRK07063, PRK07063, short chain dehydrogenase; Provisional

 Score = 97.8 bits (244), Expect = 1e-24
 Identities = 59/199 (29%), Positives = 98/199 (49%), Gaps = 8/199 (4%)

Query: 41  FSEDVSGKVVIITGASSGIGEHLAYEYARRGACLALCARREKSLEEVADTAREIGSP-DV 99
               ++GKV ++TGA+ GIG  +A  +AR GA +AL        E  A       +   V
Sbjct: 1   MMNRLAGKVALVTGAAQGIGAAIARAFAREGAAVALADLDAALAERAAAAIARDVAGARV 60

Query: 100 ITIRADVSKVDDCRSLVEETMNHFGRLDHLVNNAGISSVALFEDIVNIT--DFKQIMNIN 157
           + + ADV+      + V      FG LD LVNNAGI+   +F D + +T  D+++   ++
Sbjct: 61  LAVPADVTDAASVAAAVAAAEEAFGPLDVLVNNAGIN---VFADPLAMTDEDWRRCFAVD 117

Query: 158 FWGSVYTTRFAVPH-LRYTKGKIVVLSSAASWLTAPRMSFYNASKAALVLFFETLRVELG 216
             G+    R  +P  +   +G IV ++S  ++   P    Y  +K  L+     L +E  
Sbjct: 118 LDGAWNGCRAVLPGMVERGRGSIVNIASTHAFKIIPGCFPYPVAKHGLLGLTRALGIEYA 177

Query: 217 S-DVGVTIVTPGFIESELT 234
           + +V V  + PG+IE++LT
Sbjct: 178 ARNVRVNAIAPGYIETQLT 196

Length = 260

>gnl|CDD|236190 PRK08220, PRK08220, 2,3-dihydroxybenzoate-2,3-dehydrogenase; Validated

 Score = 97.6 bits (244), Expect = 2e-24
 Identities = 58/189 (30%), Positives = 86/189 (45%), Gaps = 19/189 (10%)

Query: 44  DVSGKVVIITGASSGIGEHLAYEYARRGACLALCARREKSLEEVADTAREIGSPDVITIR 103
           D SGK V +TGA+ GIG  +A  +   GA +    +   + E+              T  
Sbjct: 5   DFSGKTVWVTGAAQGIGYAVALAFVEAGAKVIGFDQAFLTQEDYP----------FATFV 54

Query: 104 ADVSKVDDCRSLVEETMNHFGRLDHLVNNAGISSVALFEDIVNITDFKQIMNINFWGSVY 163
            DVS       + +  +   G LD LVN AGI  +   + + +  D++Q   +N  G+  
Sbjct: 55  LDVSDAAAVAQVCQRLLAETGPLDVLVNAAGILRMGATDSL-SDEDWQQTFAVNAGGAFN 113

Query: 164 TTRFAVPHLRYTK-GKIV-VLSSAASWLTAPR--MSFYNASKAALVLFFETLRVEL-GSD 218
             R  +P  R  + G IV V S+AA     PR  M+ Y ASKAAL    + + +EL    
Sbjct: 114 LFRAVMPQFRRQRSGAIVTVGSNAAH---VPRIGMAAYGASKAALTSLAKCVGLELAPYG 170

Query: 219 VGVTIVTPG 227
           V   +V+PG
Sbjct: 171 VRCNVVSPG 179

Length = 252

>gnl|CDD|187591 cd05330, cyclohexanol_reductase_SDR_c, cyclohexanol reductases, including levodione reductase, classical (c) SDRs

 Score = 97.6 bits (243), Expect = 2e-24
 Identities = 66/197 (33%), Positives = 93/197 (47%), Gaps = 9/197 (4%)

Query: 48  KVVIITGASSGIGEHLAYEYARRGACLALCARREKSLEEVADTAREIGSPD--VITIRAD 105
           KVV+ITG  SG+G   A   A+ GA L+L    E+ LE       EI +PD  V+ I+AD
Sbjct: 4   KVVLITGGGSGLGLATAVRLAKEGAKLSLVDLNEEGLEAAKAALLEI-APDAEVLLIKAD 62

Query: 106 VSKVDDCRSLVEETMNHFGRLDHLVNNAGISS-VALFEDIVNITDFKQIMNINFWGSVYT 164
           VS      + V+ T+  FGR+D   NNAGI     L ED     +F ++++IN  G  Y 
Sbjct: 63  VSDEAQVEAYVDATVEQFGRIDGFFNNAGIEGKQNLTEDF-GADEFDKVVSINLRGVFYG 121

Query: 165 TRFAVPHLRYTK-GKIVVLSSAASWLTAPRMSFYNASKAALVLFFETLRVELGSDVGVTI 223
               +  +R    G IV  +S          S Y A+K  +V       VE G   G+ I
Sbjct: 122 LEKVLKVMREQGSGMIVNTASVGGIRGVGNQSGYAAAKHGVVGLTRNSAVEYGQY-GIRI 180

Query: 224 --VTPGFIESELTQGKF 238
             + PG I + + +G  
Sbjct: 181 NAIAPGAILTPMVEGSL 197

Cyloclohexanol reductases,including (6R)-2,2,6-trimethyl-1,4-cyclohexanedione (levodione) reductase of Corynebacterium aquaticum, catalyze the reversible oxidoreduction of hydroxycyclohexanone derivatives. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold (alpha/beta folding pattern with a central beta-sheet), an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Classical SDRs are typically about 250 residues long, while extended SDRs are approximately 350 residues. Sequence identity between different SDR enzymes are typically in the 15-30% range, but the enzymes share the Rossmann fold NAD-binding motif and characteristic NAD-binding and catalytic sequence patterns. These enzymes catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase (15-PGDH) numbering). In addition to the Tyr and Lys, there is often an upstream Ser (Ser-138, 15-PGDH numbering) and/or an Asn (Asn-107, 15-PGDH numbering) contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. Extended SDRs have additional elements in the C-terminal region, and typically have a TGXXGXXG cofactor binding motif. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid synthase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type ketoacyl reductases have a TGXXXGX(1-2)G NAD(P)-binding motif. Some atypical SDRs have lost catalytic activity and/or have an unusual NAD(P)-binding motif and missing or unusual active site residues. Reactions catalyzed within the SDR family include isomerization, decarboxylation, epimerization, C=N bond reduction, dehydratase activity, dehalogenation, Enoyl-CoA reduction, and carbonyl-alcohol oxidoreduction. Length = 257

>gnl|CDD|235925 PRK07067, PRK07067, sorbitol dehydrogenase; Provisional

 Score = 97.8 bits (244), Expect = 2e-24
 Identities = 49/164 (29%), Positives = 80/164 (48%), Gaps = 11/164 (6%)

Query: 46  SGKVVIITGASSGIGEHLAYEYARRGACLALCARREKSLEEVADTAREIGSPDVITIRAD 105
            GKV ++TGA+SGIGE +A  Y   GA        +         A EIG P  I +  D
Sbjct: 5   QGKVALLTGAASGIGEAVAERYLAEGA---RVVIADIKPARARLAALEIG-PAAIAVSLD 60

Query: 106 VSKVDDCRSLVEETMNHFGRLDHLVNNAGISSVALFEDIVNIT--DFKQIMNINFWGSVY 163
           V++ D    +V   +  FG +D L NNA +  +A    I++I+   + ++  +N  G  +
Sbjct: 61  VTRQDSIDRIVAAAVERFGGIDILFNNAALFDMA---PILDISRDSYDRLFAVNVKGLFF 117

Query: 164 TTRFAVPHL--RYTKGKIVVLSSAASWLTAPRMSFYNASKAALV 205
             +    H+  +   GKI+ ++S A       +S Y A+KAA++
Sbjct: 118 LMQAVARHMVEQGRGGKIINMASQAGRRGEALVSHYCATKAAVI 161

Length = 257

>gnl|CDD|187612 cd05354, SDR_c7, classical (c) SDR, subgroup 7

 Score = 96.7 bits (241), Expect = 3e-24
 Identities = 59/195 (30%), Positives = 90/195 (46%), Gaps = 11/195 (5%)

Query: 45  VSGKVVIITGASSGIGEHLAYEYARRGACLALCARREKSLEEVADTAREIGSPDVITIRA 104
           +  K V++TGA+ GIG+         GA     A R+      A    + G   V+ +R 
Sbjct: 1   IKDKTVLVTGANRGIGKAFVESLLAHGAKKVYAAVRD--PGSAAHLVAKYGD-KVVPLRL 57

Query: 105 DVSKVDDCRSLVEETMNHFGRLDHLVNNAGISSVA-LFEDIVNITDFKQIMNINFWGSVY 163
           DV+   D  S ++        +D ++NNAG+   A L E+   +   KQ M++N +G + 
Sbjct: 58  DVT---DPES-IKAAAAQAKDVDVVINNAGVLKPATLLEEGA-LEALKQEMDVNVFGLLR 112

Query: 164 TTRFAVPHL-RYTKGKIVVLSSAASWLTAPRMSFYNASKAALVLFFETLRVELGSD-VGV 221
             +   P L     G IV L+S AS    P M  Y+ASK+A     + LR EL +    V
Sbjct: 113 LAQAFAPVLKANGGGAIVNLNSVASLKNFPAMGTYSASKSAAYSLTQGLRAELAAQGTLV 172

Query: 222 TIVTPGFIESELTQG 236
             V PG I++ +  G
Sbjct: 173 LSVHPGPIDTRMAAG 187

These proteins are members of the classical SDR family, with a canonical active site triad (and also an active site Asn) and a typical Gly-rich NAD-binding motif. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold (alpha/beta folding pattern with a central beta-sheet), an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Classical SDRs are typically about 250 residues long, while extended SDRS are approximately 350 residues. Sequence identity between different SDR enzymes are typically in the 15-30% range, but the enzymes share the Rossmann fold NAD-binding motif and characteristic NAD-binding and catalytic sequence patterns. These enzymes have a 3-glycine N-terminal NAD(P)(H)-binding pattern (typically, TGxxxGxG in classical SDRs and TGxxGxxG in extended SDRs), while substrate binding is in the C-terminal region. A critical catalytic Tyr residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase (15-PGDH) numbering), is often found in a conserved YXXXK pattern. In addition to the Tyr and Lys, there is often an upstream Ser (Ser-138, 15-PGDH numbering) and/or an Asn (Asn-107, 15-PGDH numbering) or additional Ser, contributing to the active site. Substrates for these enzymes include sugars, steroids, alcohols, and aromatic compounds. The standard reaction mechanism is a proton relay involving the conserved Tyr and Lys, as well as Asn (or Ser). Some SDR family members, including 17 beta-hydroxysteroid dehydrogenase contain an additional helix-turn-helix motif that is not generally found among SDRs. Length = 235

>gnl|CDD|168574 PRK06484, PRK06484, short chain dehydrogenase; Validated

 Score =  100 bits (250), Expect = 3e-24
 Identities = 54/193 (27%), Positives = 93/193 (48%), Gaps = 8/193 (4%)

Query: 47  GKVVIITGASSGIGEHLAYEYARRGACLALCARREKSLEEVADTAREIGSPDVITIRADV 106
            +VV++TGA+ GIG      +AR G  + +  R  +   E AD    +G      +  DV
Sbjct: 5   SRVVLVTGAAGGIGRAACQRFARAGDQVVVADRNVERARERAD---SLGPDHH-ALAMDV 60

Query: 107 SKVDDCRSLVEETMNHFGRLDHLVNNAGISSVALFEDI-VNITDFKQIMNINFWGSVYTT 165
           S     R   E+    FGR+D LVNNAG++   +   +   + +F ++  IN  G+    
Sbjct: 61  SDEAQIREGFEQLHREFGRIDVLVNNAGVTDPTMTATLDTTLEEFARLQAINLTGAYLVA 120

Query: 166 RFAVPHLRYTK--GKIVVLSSAASWLTAPRMSFYNASKAALVLFFETLRVELGSD-VGVT 222
           R A+  +        IV ++S A  +  P+ + Y+ASKAA++    +L  E  +  + V 
Sbjct: 121 REALRLMIEQGHGAAIVNVASGAGLVALPKRTAYSASKAAVISLTRSLACEWAAKGIRVN 180

Query: 223 IVTPGFIESELTQ 235
            V PG++ +++  
Sbjct: 181 AVLPGYVRTQMVA 193

Length = 520

>gnl|CDD|187636 cd08931, SDR_c9, classical (c) SDR, subgroup 9

 Score = 95.2 bits (237), Expect = 7e-24
 Identities = 59/187 (31%), Positives = 95/187 (50%), Gaps = 7/187 (3%)

Query: 48  KVVIITGASSGIGEHLAYEYARRGACLALCARREKSLEEVADTAREIGSPDVITIRADVS 107
           K + ITGA+SGIG   A  +AR G  + L    E  L   A  A E+G+ +V+    DV+
Sbjct: 1   KAIFITGAASGIGRETALLFARNGWFVGLYDIDEDGL---AALAAELGAENVVAGALDVT 57

Query: 108 KVDDCR-SLVEETMNHFGRLDHLVNNAGISSVALFEDIVNITDFKQIMNINFWGSVYTTR 166
                  +L +      GRLD L NNAG+     FED+  +    ++++IN  G +    
Sbjct: 58  DRAAWAAALADFAAATGGRLDALFNNAGVGRGGPFEDV-PLAAHDRMVDINVKGVLNGAY 116

Query: 167 FAVPHLRYTKGKIVV-LSSAASWLTAPRMSFYNASKAALVLFFETLRVELGS-DVGVTIV 224
            A+P+L+ T G  V+  +S+++    P ++ Y+A+K A+    E L VE     + V  V
Sbjct: 117 AALPYLKATPGARVINTASSSAIYGQPDLAVYSATKFAVRGLTEALDVEWARHGIRVADV 176

Query: 225 TPGFIES 231
            P F+++
Sbjct: 177 WPWFVDT 183

This subgroup has the canonical active site tetrad and NAD-binding motif of the classical SDRs. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold (alpha/beta folding pattern with a central beta-sheet), an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Classical SDRs are typically about 250 residues long, while extended SDRs are approximately 350 residues. Sequence identity between different SDR enzymes are typically in the 15-30% range, but the enzymes share the Rossmann fold NAD-binding motif and characteristic NAD-binding and catalytic sequence patterns. These enzymes catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase (15-PGDH) numbering). In addition to the Tyr and Lys, there is often an upstream Ser (Ser-138, 15-PGDH numbering) and/or an Asn (Asn-107, 15-PGDH numbering) contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. Extended SDRs have additional elements in the C-terminal region, and typically have a TGXXGXXG cofactor binding motif. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid synthase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type ketoacyl reductases have a TGXXXGX(1-2)G NAD(P)-binding motif. Some atypical SDRs have lost catalytic activity and/or have an unusual NAD(P)-binding motif and missing or unusual active site residues. Reactions catalyzed within the SDR family include isomerization, decarboxylation, epimerization, C=N bond reduction, dehydratase activity, dehalogenation, Enoyl-CoA reduction, and carbonyl-alcohol oxidoreduction. Length = 227

>gnl|CDD|181139 PRK07832, PRK07832, short chain dehydrogenase; Provisional

 Score = 95.9 bits (239), Expect = 1e-23
 Identities = 59/194 (30%), Positives = 95/194 (48%), Gaps = 10/194 (5%)

Query: 48  KVVIITGASSGIGEHLAYEYARRGACLALCARREKSLEEVADTAREIGSPDVITIRA-DV 106
           K   +TGA+SGIG   A   A +GA L L  R    L +    AR +G   V   RA D+
Sbjct: 1   KRCFVTGAASGIGRATALRLAAQGAELFLTDRDADGLAQTVADARALGG-TVPEHRALDI 59

Query: 107 SKVDDCRSLVEETMNHFGRLDHLVNNAGISSVALFEDIVNIT--DFKQIMNINFWGSVYT 164
           S  D   +   +     G +D ++N AGIS    +  +  +T   +++++++N  G ++ 
Sbjct: 60  SDYDAVAAFAADIHAAHGSMDVVMNIAGIS---AWGTVDRLTHEQWRRMVDVNLMGPIHV 116

Query: 165 TRFAVPHL--RYTKGKIVVLSSAASWLTAPRMSFYNASKAALVLFFETLRVELGS-DVGV 221
               VP +      G +V +SSAA  +  P  + Y+ASK  L    E LR +L    +GV
Sbjct: 117 IETFVPPMVAAGRGGHLVNVSSAAGLVALPWHAAYSASKFGLRGLSEVLRFDLARHGIGV 176

Query: 222 TIVTPGFIESELTQ 235
           ++V PG +++ L  
Sbjct: 177 SVVVPGAVKTPLVN 190

Length = 272

>gnl|CDD|180984 PRK07454, PRK07454, short chain dehydrogenase; Provisional

 Score = 95.0 bits (237), Expect = 1e-23
 Identities = 58/189 (30%), Positives = 95/189 (50%), Gaps = 6/189 (3%)

Query: 48  KVVIITGASSGIGEHLAYEYARRGACLALCARREKSLEEVADTAREIGSPDVITIRADVS 107
              +ITGASSGIG+  A  +A+ G  LAL AR + +LE +A   R  G         D+S
Sbjct: 7   PRALITGASSGIGKATALAFAKAGWDLALVARSQDALEALAAELRSTGV-KAAAYSIDLS 65

Query: 108 KVDDCRSLVEETMNHFGRLDHLVNNAGISSVALFEDIVNITDFKQIMNINFWGSVY-TTR 166
             +     + E +  FG  D L+NNAG++      + + ++D++ ++ +N   SV+    
Sbjct: 66  NPEAIAPGIAELLEQFGCPDVLINNAGMAYTGPLLE-MPLSDWQWVIQLNL-TSVFQCCS 123

Query: 167 FAVPHLRYTKGKIVV-LSSAASWLTAPRMSFYNASKAALVLFFETLRVELGS-DVGVTIV 224
             +P +R   G +++ +SS A+    P+   Y  SKAAL  F + L  E  S  + V  +
Sbjct: 124 AVLPGMRARGGGLIINVSSIAARNAFPQWGAYCVSKAALAAFTKCLAEEERSHGIRVCTI 183

Query: 225 TPGFIESEL 233
           T G + + L
Sbjct: 184 TLGAVNTPL 192

Length = 241

>gnl|CDD|187662 cd09761, A3DFK9-like_SDR_c, Clostridium thermocellum A3DFK9-like, a putative carbohydrate or polyalcohol metabolizing SDR, classical (c) SDRs

 Score = 95.0 bits (236), Expect = 1e-23
 Identities = 51/198 (25%), Positives = 93/198 (46%), Gaps = 5/198 (2%)

Query: 47  GKVVIITGASSGIGEHLAYEYARRGACLALCARREKSLEEVADTAREIGSPDVITIRADV 106
           GKV I+TG   GIG+ +  ++   G  +      E+   + A+       P++  +  DV
Sbjct: 1   GKVAIVTGGGHGIGKQICLDFLEAGDKVVFADIDEERGADFAEAEG----PNLFFVHGDV 56

Query: 107 SKVDDCRSLVEETMNHFGRLDHLVNNAGISSVALFEDIVNITDFKQIMNINFWGSVYTTR 166
           +     + +V   +   GR+D LVNNA   S  +   ++ + ++ +I+++N  G    +R
Sbjct: 57  ADETLVKFVVYAMLEKLGRIDVLVNNAARGSKGILSSLL-LEEWDRILSVNLTGPYELSR 115

Query: 167 FAVPHLRYTKGKIVVLSSAASWLTAPRMSFYNASKAALVLFFETLRVELGSDVGVTIVTP 226
           +    L   KG+I+ ++S  ++ + P    Y ASK  LV     L + LG D+ V  ++P
Sbjct: 116 YCRDELIKNKGRIINIASTRAFQSEPDSEAYAASKGGLVALTHALAMSLGPDIRVNCISP 175

Query: 227 GFIESELTQGKFLTGRRQ 244
           G+I +   Q        Q
Sbjct: 176 GWINTTEQQEFTAAPLTQ 193

This subgroup includes a putative carbohydrate or polyalcohol metabolizing SDR (A3DFK9) from Clostridium thermocellum. Its members have a TGXXXGXG classical-SDR glycine-rich NAD-binding motif, and some have a canonical SDR active site tetrad (A3DFK9 lacks the upstream Asn). SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold (alpha/beta folding pattern with a central beta-sheet), an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Classical SDRs are typically about 250 residues long, while extended SDRs are approximately 350 residues. Sequence identity between different SDR enzymes are typically in the 15-30% range, but the enzymes share the Rossmann fold NAD-binding motif and characteristic NAD-binding and catalytic sequence patterns. These enzymes catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase (15-PGDH) numbering). In addition to the Tyr and Lys, there is often an upstream Ser (Ser-138, 15-PGDH numbering) and/or an Asn (Asn-107, 15-PGDH numbering) contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. Extended SDRs have additional elements in the C-terminal region, and typically have a TGXXGXXG cofactor binding motif. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid synthase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type ketoacyl reductases have a TGXXXGX(1-2)G NAD(P)-binding motif. Some atypical SDRs have lost catalytic activity and/or have an unusual NAD(P)-binding motif and missing or unusual active site residues. Reactions catalyzed within the SDR family include isomerization, decarboxylation, epimerization, C=N bond reduction, dehydratase activity, dehalogenation, Enoyl-CoA reduction, and carbonyl-alcohol oxidoreduction. Length = 242

>gnl|CDD|237219 PRK12827, PRK12827, short chain dehydrogenase; Provisional

 Score = 94.8 bits (236), Expect = 2e-23
 Identities = 61/207 (29%), Positives = 96/207 (46%), Gaps = 11/207 (5%)

Query: 47  GKVVIITGASSGIGEHLAYEYARRGA---CLALCARREKSLEEVADTAREIGSP--DVIT 101
            + V+ITG S G+G  +A   A  GA    L +   R     E    A  I +     + 
Sbjct: 6   SRRVLITGGSGGLGRAIAVRLAADGADVIVLDIHPMR--GRAEADAVAAGIEAAGGKALG 63

Query: 102 IRADVSKVDDCRSLVEETMNHFGRLDHLVNNAGISSVALFEDIVNITDFKQIMNINFWGS 161
           +  DV      R+ ++  +  FGRLD LVNNAGI++ A F + ++I ++  ++++N  G 
Sbjct: 64  LAFDVRDFAATRAALDAGVEEFGRLDILVNNAGIATDAAFAE-LSIEEWDDVIDVNLDGF 122

Query: 162 VYTTRFAVPHLRYTK--GKIVVLSSAASWLTAPRMSFYNASKAALVLFFETLRVELGS-D 218
              T+ A+P +   +  G+IV ++S A          Y ASKA L+   +TL  EL    
Sbjct: 123 FNVTQAALPPMIRARRGGRIVNIASVAGVRGNRGQVNYAASKAGLIGLTKTLANELAPRG 182

Query: 219 VGVTIVTPGFIESELTQGKFLTGRRQN 245
           + V  V PG I + +      T    N
Sbjct: 183 ITVNAVAPGAINTPMADNAAPTEHLLN 209

Length = 249

>gnl|CDD|181297 PRK08217, fabG, 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional

 Score = 94.6 bits (236), Expect = 2e-23
 Identities = 61/204 (29%), Positives = 101/204 (49%), Gaps = 17/204 (8%)

Query: 44  DVSGKVVIITGASSGIGEHLAYEYARRGACLALCARREKSLEEVADTAREIGSPDVITIR 103
           D+  KV++ITG + G+G  +A   A++GA LAL    ++ LEE       +G+ +V    
Sbjct: 2   DLKDKVIVITGGAQGLGRAMAEYLAQKGAKLALIDLNQEKLEEAVAECGALGT-EVRGYA 60

Query: 104 ADVSKVDDCRSLVEETMNHFGRLDHLVNNAGISSVALF--------EDIVNITDFKQIMN 155
           A+V+  +D  +   +    FG+L+ L+NNAGI    L            +++  F+ +++
Sbjct: 61  ANVTDEEDVEATFAQIAEDFGQLNGLINNAGILRDGLLVKAKDGKVTSKMSLEQFQSVID 120

Query: 156 INFWGSVYTTRFAVPHLRYT--KGKIVVLSSAASWLTAPRM--SFYNASKAALVLFFETL 211
           +N  G     R A   +  +  KG I+ +SS A    A  M  + Y+ASKA +     T 
Sbjct: 121 VNLTGVFLCGREAAAKMIESGSKGVIINISSIAR---AGNMGQTNYSASKAGVAAMTVTW 177

Query: 212 RVELGS-DVGVTIVTPGFIESELT 234
             EL    + V  + PG IE+E+T
Sbjct: 178 AKELARYGIRVAAIAPGVIETEMT 201

Length = 253

>gnl|CDD|181508 PRK08628, PRK08628, short chain dehydrogenase; Provisional

 Score = 94.3 bits (235), Expect = 3e-23
 Identities = 50/158 (31%), Positives = 74/158 (46%), Gaps = 6/158 (3%)

Query: 47  GKVVIITGASSGIGEHLAYEYARRGACLALCARREKSLEEVADTAREIGSPDVITIRADV 106
            KVVI+TG +SGIG  ++   A  GA   +  R     E   +       P    ++ D+
Sbjct: 7   DKVVIVTGGASGIGAAISLRLAEEGAIPVIFGRSAPDDEFAEELRAL--QPRAEFVQVDL 64

Query: 107 SKVDDCRSLVEETMNHFGRLDHLVNNAGIS-SVALFEDIVNITDFKQIMNINFWGSVYTT 165
           +    CR  VE+T+  FGR+D LVNNAG++  V L E       F   +  N        
Sbjct: 65  TDDAQCRDAVEQTVAKFGRIDGLVNNAGVNDGVGL-EA--GREAFVASLERNLIHYYVMA 121

Query: 166 RFAVPHLRYTKGKIVVLSSAASWLTAPRMSFYNASKAA 203
            + +PHL+ ++G IV +SS  +       S Y A+K A
Sbjct: 122 HYCLPHLKASRGAIVNISSKTALTGQGGTSGYAAAKGA 159

Length = 258

>gnl|CDD|180446 PRK06180, PRK06180, short chain dehydrogenase; Provisional

 Score = 93.8 bits (234), Expect = 5e-23
 Identities = 53/184 (28%), Positives = 84/184 (45%), Gaps = 7/184 (3%)

Query: 46  SGKVVIITGASSGIGEHLAYEYARRGACLALCARREKSLEEVADTAREIGSPDVITIRAD 105
           S K  +ITG SSG G  LA      G  +    R E +  +      +      +    D
Sbjct: 3   SMKTWLITGVSSGFGRALAQAALAAGHRVVGTVRSEAARADFEALHPD----RALARLLD 58

Query: 106 VSKVDDCRSLVEETMNHFGRLDHLVNNAGISSVALFEDIVNITDFKQIMNINFWGSVYTT 165
           V+  D   ++V +    FG +D LVNNAG       E+   + + ++   +N +G+V  T
Sbjct: 59  VTDFDAIDAVVADAEATFGPIDVLVNNAGYGHEGAIEE-SPLAEMRRQFEVNVFGAVAMT 117

Query: 166 RFAVPHLRYTK-GKIVVLSSAASWLTAPRMSFYNASKAALVLFFETLRVELGS-DVGVTI 223
           +  +P +R  + G IV ++S    +T P + +Y  SK AL    E+L  E+    + VT 
Sbjct: 118 KAVLPGMRARRRGHIVNITSMGGLITMPGIGYYCGSKFALEGISESLAKEVAPFGIHVTA 177

Query: 224 VTPG 227
           V PG
Sbjct: 178 VEPG 181

Length = 277

>gnl|CDD|181721 PRK09242, PRK09242, tropinone reductase; Provisional

 Score = 93.3 bits (232), Expect = 6e-23
 Identities = 62/198 (31%), Positives = 97/198 (48%), Gaps = 12/198 (6%)

Query: 46  SGKVVIITGASSGIGEHLAYEYARRGACLALCARREKSLEEVADTAREIGSP-DVITIRA 104
            G+  +ITGAS GIG  +A E+   GA + + AR   +L +  D   E     +V  + A
Sbjct: 8   DGQTALITGASKGIGLAIAREFLGLGADVLIVARDADALAQARDELAEEFPEREVHGLAA 67

Query: 105 DVSKVDDCRSLVEETMNHFGRLDHLVNNAG--ISSVAL--FEDIVNITDFKQIMNINFWG 160
           DVS  +D R++++   +H+  L  LVNNAG  I   A+   ED     +++ I   N + 
Sbjct: 68  DVSDDEDRRAILDWVEDHWDGLHILVNNAGGNIRKAAIDYTED-----EWRGIFETNLFS 122

Query: 161 SVYTTRFAVPHL-RYTKGKIVVLSSAASWLTAPRMSFYNASKAALVLFFETLRVELGSD- 218
           +   +R+A P L ++    IV + S +        + Y  +KAAL+     L VE   D 
Sbjct: 123 AFELSRYAHPLLKQHASSAIVNIGSVSGLTHVRSGAPYGMTKAALLQMTRNLAVEWAEDG 182

Query: 219 VGVTIVTPGFIESELTQG 236
           + V  V P +I + LT G
Sbjct: 183 IRVNAVAPWYIRTPLTSG 200

Length = 257

>gnl|CDD|187596 cd05337, BKR_1_SDR_c, putative beta-ketoacyl acyl carrier protein [ACP] reductase (BKR), subgroup 1, classical (c) SDR

 Score = 93.3 bits (232), Expect = 6e-23
 Identities = 62/202 (30%), Positives = 98/202 (48%), Gaps = 23/202 (11%)

Query: 49  VVIITGASSGIGEHLAYEYARRGACLALCARREK-SLEEVADTAREIGSPDVITIRADVS 107
           V I+TGAS GIG  +A E A RG  +A+    +     EV       G    I  +AD+ 
Sbjct: 3   VAIVTGASRGIGRAIATELAARGFDIAINDLPDDDQATEVVAEVLAAGR-RAIYFQADIG 61

Query: 108 KVDDCRSLVEETMNHFGRLDHLVNNAGISSVALFEDIVNITD--FKQIMNINFWGSVYTT 165
           ++ D  +L+++    FGRLD LVNNAGI+      D++++T+  F +++ IN  G  + T
Sbjct: 62  ELSDHEALLDQAWEDFGRLDCLVNNAGIAVRPR-GDLLDLTEDSFDRLIAINLRGPFFLT 120

Query: 166 ------------RFAVPHLRYTKGKIVVLSSAASWLTAPRMSFYNASKAALVLFFETLRV 213
                       RF  PH       I+ ++S  ++L +P    Y  SKA L +    L  
Sbjct: 121 QAVARRMVEQPDRFDGPH-----RSIIFVTSINAYLVSPNRGEYCISKAGLSMATRLLAY 175

Query: 214 ELGSD-VGVTIVTPGFIESELT 234
            L  + + V  + PG I +++T
Sbjct: 176 RLADEGIAVHEIRPGLIHTDMT 197

This subgroup includes Escherichia coli CFT073 FabG. The Escherichai coli K12 BKR, FabG, belongs to a different subgroup. BKR catalyzes the NADPH-dependent reduction of ACP in the first reductive step of de novo fatty acid synthesis (FAS). FAS consists of four elongation steps, which are repeated to extend the fatty acid chain through the addition of two-carbo units from malonyl acyl-carrier protein (ACP): condensation, reduction, dehydration, and a final reduction. Type II FAS, typical of plants and many bacteria, maintains these activities on discrete polypeptides, while type I FAS utilizes one or two multifunctional polypeptides. BKR resembles enoyl reductase, which catalyzes the second reduction step in FAS. SDRs are a functionally diverse family of oxidoreductases that have a single domain with structurally conserved Rossmann fold (alpha/beta folding pattern with a central beta-sheet) NAD(P)(H) binding region and a structurally diverse C-terminal region. Classical SDRs are typically about 250 residues long, while extended SDRS are approximately 350 residues. Sequence identity between different SDR enzymes are typically in the 15-30% range, but the enzymes share the Rossmann fold NAD binding motif and characteristic NAD-binding and catalytic sequence patterns. These enzymes have a 3-glycine N-terminal NAD(P)(H) binding pattern: TGxxxGxG in classical SDRs. Extended SDRs have additional elements in the C-terminal region, and typically have a TGXXGXXG cofactor binding motif. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid synthase have a GGXGXXG NAD(P) binding motif and an altered active site motif (YXXXN). Fungal type type ketoacyl reductases have a TGXXXGX(1-2)G NAD(P)-binding motif. Some atypical SDRs have lost catalytic activity and/or have an unusual NAD(P) binding motif and missing or unusual active site residues. Reactions catalyzed within the SDR family include isomerization, decarboxylation, epimerization, C=N bond reduction, dehydratase activity, dehalogenation, Enoyl-CoA reduction, and carbonyl-alcohol oxidoreduction. A critical catalytic Tyr residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase (15-PGDH) numbering), is often found in a conserved YXXXK pattern. In addition to the Tyr and Lys, there is often an upstream Ser (Ser-138, 15-PGDH numbering) and/or an Asn (Asn-107, 15-PGDH numbering) or additional Ser, contributing to the active site. Substrates for these enzymes include sugars, steroids, alcohols, and aromatic compounds. The standard reaction mechanism is a proton relay involving the conserved Tyr-151 and Lys-155, and well as Asn-111 (or Ser). Some SDR family members, including 17 beta-hydroxysteroid dehydrogenase contain an additional helix-turn-helix motif that is not generally found among SDRs. Length = 255

>gnl|CDD|234422 TIGR03971, SDR_subfam_1, oxidoreductase, SDR family

 Score = 93.4 bits (232), Expect = 7e-23
 Identities = 64/205 (31%), Positives = 101/205 (49%), Gaps = 18/205 (8%)

Query: 47  GKVVIITGASSGIGEHLAYEYARRGA---CLALCARREK-------SLEEVADTAR--EI 94
           GKV  ITGA+ G G   A   A  GA    + LCA           + E++ +TAR  E 
Sbjct: 3   GKVAFITGAARGQGRAHAVRLAAEGADIIAIDLCAPLSDYPTYPLATREDLDETARLVEA 62

Query: 95  GSPDVITIRADVSKVDDCRSLVEETMNHFGRLDHLVNNAGISSVA-LFEDIVNITDFKQI 153
               V+  +ADV  + + R++VE+ +  FGRLD +V NAG+ S    +E  ++   +  +
Sbjct: 63  LGRKVLARKADVRDLAEVRAVVEDGVEQFGRLDVVVANAGVLSYGRSWE--LSEEQWDTV 120

Query: 154 MNINFWGSVYTTRFAVPHL--RYTKGKIVVLSSAASWLTAPRMSFYNASKAALVLFFETL 211
           ++IN  G   T +  VPH+  R   G I++ SS A     P ++ Y A+K  LV   +TL
Sbjct: 121 LDINLTGVWRTCKAVVPHMIERGNGGSIIITSSVAGLKALPGLAHYAAAKHGLVGLTKTL 180

Query: 212 RVELGS-DVGVTIVTPGFIESELTQ 235
             EL    + V  + P  +++ +  
Sbjct: 181 ANELAEYGIRVNSIHPYSVDTPMIA 205

Members of this protein subfamily are putative oxidoreductases belonging to the larger SDR family. Members of the present subfamily may occur several to a genome and are largely restricted to genomes that contain members of families TIGR03962, TIGR03967, and TIGR03969. Many members have been annotated by homology as carveol dehydrogenases. Length = 265

>gnl|CDD|181298 PRK08219, PRK08219, short chain dehydrogenase; Provisional

 Score = 92.7 bits (231), Expect = 8e-23
 Identities = 57/189 (30%), Positives = 88/189 (46%), Gaps = 11/189 (5%)

Query: 48  KVVIITGASSGIGEHLAYEYARRGACLALCARREKSLEEVADTAREIGSPDVITIRADVS 107
              +ITGAS GIG  +A E A     L L  R  + L+E+A        P       D++
Sbjct: 4   PTALITGASRGIGAAIARELAPTHT-LLLGGRPAERLDELAAEL-----PGATPFPVDLT 57

Query: 108 KVDDCRSLVEETMNHFGRLDHLVNNAGISSVALFEDIVNITDFKQIMNINFWGSVYTTRF 167
             +   + VE      GRLD LV+NAG++ +    +   + +++  + +N       TR 
Sbjct: 58  DPEAIAAAVE----QLGRLDVLVHNAGVADLGPVAE-STVDEWRATLEVNVVAPAELTRL 112

Query: 168 AVPHLRYTKGKIVVLSSAASWLTAPRMSFYNASKAALVLFFETLRVELGSDVGVTIVTPG 227
            +P LR   G +V ++S A     P    Y ASK AL    + LR E   +V VT V PG
Sbjct: 113 LLPALRAAHGHVVFINSGAGLRANPGWGSYAASKFALRALADALREEEPGNVRVTSVHPG 172

Query: 228 FIESELTQG 236
             ++++ +G
Sbjct: 173 RTDTDMQRG 181

Length = 227

>gnl|CDD|187625 cd05367, SPR-like_SDR_c, sepiapterin reductase (SPR)-like, classical (c) SDRs

 Score = 92.7 bits (231), Expect = 8e-23
 Identities = 57/184 (30%), Positives = 84/184 (45%), Gaps = 9/184 (4%)

Query: 49  VVIITGASSGIGEHLAYEYARRG-ACLALCARREKSLEEVADTAREIGSPDVITIR-ADV 106
           V+I+TGAS GIG  LA E  +RG   + +   R  S E + +   E+     +T   AD+
Sbjct: 1   VIILTGASRGIGRALAEELLKRGSPSVVVLLAR--SEEPLQELKEELRPGLRVTTVKADL 58

Query: 107 SKVDDCRSLVEETMNHFGRLDHLVNNAG-ISSVALFEDIVNITDFKQIMNINFWGSVYTT 165
           S       L+E      G  D L+NNAG +  V+  E I ++ + ++  ++N    V  T
Sbjct: 59  SDAAGVEQLLEAIRKLDGERDLLINNAGSLGPVSKIEFI-DLDELQKYFDLNLTSPVCLT 117

Query: 166 RFAVPHL--RYTKGKIVVLSSAASWLTAPRMSFYNASKAALVLFFETLRVELGSDVGVTI 223
              +     R  K  +V +SS A+         Y +SKAA  +FF  L  E   DV V  
Sbjct: 118 STLLRAFKKRGLKKTVVNVSSGAAVNPFKGWGLYCSSKAARDMFFRVLAAEE-PDVRVLS 176

Query: 224 VTPG 227
             PG
Sbjct: 177 YAPG 180

Human SPR, a member of the SDR family, catalyzes the NADP-dependent reduction of sepiaptern to 7,8-dihydrobiopterin (BH2). In addition to SPRs, this subgroup also contains Bacillus cereus yueD, a benzil reductase, which catalyzes the stereospecific reduction of benzil to (S)-benzoin. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold (alpha/beta folding pattern with a central beta-sheet), an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Classical SDRs are typically about 250 residues long, while extended SDRs are approximately 350 residues. Sequence identity between different SDR enzymes are typically in the 15-30% range, but the enzymes share the Rossmann fold NAD-binding motif and characteristic NAD-binding and catalytic sequence patterns. These enzymes catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase (15-PGDH) numbering). In addition to the Tyr and Lys, there is often an upstream Ser (Ser-138, 15-PGDH numbering) and/or an Asn (Asn-107, 15-PGDH numbering) contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. Extended SDRs have additional elements in the C-terminal region, and typically have a TGXXGXXG cofactor binding motif. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid synthase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type ketoacyl reductases have a TGXXXGX(1-2)G NAD(P)-binding motif. Some atypical SDRs have lost catalytic activity and/or have an unusual NAD(P)-binding motif and missing or unusual active site residues. Reactions catalyzed within the SDR family include isomerization, decarboxylation, epimerization, C=N bond reduction, dehydratase activity, dehalogenation, Enoyl-CoA reduction, and carbonyl-alcohol oxidoreduction. Length = 241

>gnl|CDD|131468 TIGR02415, 23BDH, acetoin reductases

 Score = 92.9 bits (231), Expect = 9e-23
 Identities = 51/190 (26%), Positives = 95/190 (50%), Gaps = 7/190 (3%)

Query: 48  KVVIITGASSGIGEHLAYEYARRGACLALCARREKSLEEVADTAREIGSPDVITIRADVS 107
           KV ++TG + GIG+ +A   A+ G  +A+    E++ +E A    + G    +  + DVS
Sbjct: 1   KVALVTGGAQGIGKGIAERLAKDGFAVAVADLNEETAKETAKEINQAGG-KAVAYKLDVS 59

Query: 108 KVDDCRSLVEETMNHFGRLDHLVNNAGISSVALFEDIVNITDFKQIMNINFWGSVYTTRF 167
             D   S +++    FG  D +VNNAG++ +    +I    + K++ N+N  G ++  + 
Sbjct: 60  DKDQVFSAIDQAAEKFGGFDVMVNNAGVAPITPILEITE-EELKKVYNVNVKGVLFGIQA 118

Query: 168 AVPHLRY--TKGKIVVLSSAASWLTAPRMSFYNASKAALVLFFETLRVELGSDVGVTI-- 223
           A    +     GKI+  +S A     P +S Y+++K A+    +T   EL    G+T+  
Sbjct: 119 AARQFKKQGHGGKIINAASIAGHEGNPILSAYSSTKFAVRGLTQTAAQELAPK-GITVNA 177

Query: 224 VTPGFIESEL 233
             PG +++ +
Sbjct: 178 YCPGIVKTPM 187

One member of this family, as characterized in Klebsiella terrigena, is described as able to interconvert acetoin + NADH with meso-2,3-butanediol + NAD(+). It is also called capable of irreversible reduction of diacetyl with NADH to acetoin. Blomqvist, et al. decline to specify either EC 1.1.1.4 which is (R,R)-butanediol dehydrogenase, or EC 1.1.1.5, which is acetoin dehydrogenase without a specified stereochemistry, for this enzyme. This enzyme is a homotetramer in the family of short chain dehydrogenases (pfam00106). Another member of this family, from Corynebacterium glutamicum, is called L-2,3-butanediol dehydrogenase (PMID:11577733) [Energy metabolism, Fermentation]. Length = 254

>gnl|CDD|180773 PRK06949, PRK06949, short chain dehydrogenase; Provisional

 Score = 92.9 bits (231), Expect = 1e-22
 Identities = 61/211 (28%), Positives = 104/211 (49%), Gaps = 14/211 (6%)

Query: 41  FSEDVSGKVVIITGASSGIGEHLAYEYARRGACLALCARREKSLEEV-ADTAREIGSPDV 99
            S ++ GKV ++TGASSG+G   A   A+ GA + L +RR + L+E+ A+   E G+  V
Sbjct: 3   RSINLEGKVALVTGASSGLGARFAQVLAQAGAKVVLASRRVERLKELRAEIEAEGGAAHV 62

Query: 100 ITIRADVSKVDDCRSLVEETMNHFGRLDHLVNNAGISSVALFEDIVNITDFKQIMNINFW 159
           +++  DV+     ++ V       G +D LVNN+G+S+     D V   DF  + + N  
Sbjct: 63  VSL--DVTDYQSIKAAVAHAETEAGTIDILVNNSGVSTTQKLVD-VTPADFDFVFDTNTR 119

Query: 160 GSVYTT---------RFAVPHLRYTKGKIVVLSSAASWLTAPRMSFYNASKAALVLFFET 210
           G+ +           R          G+I+ ++S A     P++  Y  SKAA+V     
Sbjct: 120 GAFFVAQEVAKRMIARAKGAGNTKPGGRIINIASVAGLRVLPQIGLYCMSKAAVVHMTRA 179

Query: 211 LRVELGS-DVGVTIVTPGFIESELTQGKFLT 240
           + +E G   + V  + PG+I++E+    + T
Sbjct: 180 MALEWGRHGINVNAICPGYIDTEINHHHWET 210

Length = 258

>gnl|CDD|180818 PRK07062, PRK07062, short chain dehydrogenase; Provisional

 Score = 92.8 bits (231), Expect = 1e-22
 Identities = 55/191 (28%), Positives = 88/191 (46%), Gaps = 4/191 (2%)

Query: 44  DVSGKVVIITGASSGIGEHLAYEYARRGACLALCARREKSLEEVADTAREIGSPD-VITI 102
            + G+V ++TG SSGIG          GA +A+C R E+ L       RE      ++  
Sbjct: 5   QLEGRVAVVTGGSSGIGLATVELLLEAGASVAICGRDEERLASAEARLREKFPGARLLAA 64

Query: 103 RADVSKVDDCRSLVEETMNHFGRLDHLVNNAGISSVALFEDIVNITDFKQIMNINFWGSV 162
           R DV    D  +        FG +D LVNNAG   V+ F D  +   ++  + + ++  +
Sbjct: 65  RCDVLDEADVAAFAAAVEARFGGVDMLVNNAGQGRVSTFADTTD-DAWRDELELKYFSVI 123

Query: 163 YTTRFAVPHLRYT-KGKIVVLSSAASWLTAPRMSFYNASKAALVLFFETLRVELGSD-VG 220
             TR  +P LR +    IV ++S  +    P M   +A++A L+   ++L  EL    V 
Sbjct: 124 NPTRAFLPLLRASAAASIVCVNSLLALQPEPHMVATSAARAGLLNLVKSLATELAPKGVR 183

Query: 221 VTIVTPGFIES 231
           V  +  G +ES
Sbjct: 184 VNSILLGLVES 194

Length = 265

>gnl|CDD|181113 PRK07775, PRK07775, short chain dehydrogenase; Provisional

 Score = 92.5 bits (230), Expect = 2e-22
 Identities = 54/180 (30%), Positives = 86/180 (47%), Gaps = 4/180 (2%)

Query: 50  VIITGASSGIGEHLAYEYARRGACLALCARREKSLEEVADTAREIGSPDVITIRADVSKV 109
            ++ GASSGIG   A E A  G  +AL ARR +  EE+ D  R  G  + +    DV+  
Sbjct: 13  ALVAGASSGIGAATAIELAAAGFPVALGARRVEKCEELVDKIRADGG-EAVAFPLDVTDP 71

Query: 110 DDCRSLVEETMNHFGRLDHLVNNAGISSVALFEDIVNITDFKQIMNINFWGSVYTTRFAV 169
           D  +S V +     G ++ LV+ AG +      +I +   F+  + I+  G+       +
Sbjct: 72  DSVKSFVAQAEEALGEIEVLVSGAGDTYFGKLHEI-STEQFESQVQIHLVGANRLATAVL 130

Query: 170 PHLR-YTKGKIVVLSSAASWLTAPRMSFYNASKAALVLFFETLRVEL-GSDVGVTIVTPG 227
           P +    +G ++ + S  +    P M  Y A+KA L      L++EL G+ V  +IV PG
Sbjct: 131 PGMIERRRGDLIFVGSDVALRQRPHMGAYGAAKAGLEAMVTNLQMELEGTGVRASIVHPG 190

Length = 274

>gnl|CDD|236216 PRK08277, PRK08277, D-mannonate oxidoreductase; Provisional

 Score = 92.3 bits (230), Expect = 2e-22
 Identities = 56/208 (26%), Positives = 97/208 (46%), Gaps = 21/208 (10%)

Query: 43  EDVSGKVVIITGASSGIGEHLAYEYARRGACLALCARREKSLEEVADTAREIGSPDVITI 102
             + GKV +ITG    +G  +A E AR GA +A+  R ++  E V    +  G  + + +
Sbjct: 6   FSLKGKVAVITGGGGVLGGAMAKELARAGAKVAILDRNQEKAEAVVAEIKAAGG-EALAV 64

Query: 103 RADVSKVDDCRSLVEETMNHFGRLDHLVNNAG---------------ISSVALFEDIVNI 147
           +ADV   +      ++ +  FG  D L+N AG               I     F D+ + 
Sbjct: 65  KADVLDKESLEQARQQILEDFGPCDILINGAGGNHPKATTDNEFHELIEPTKTFFDL-DE 123

Query: 148 TDFKQIMNINFWGSVYTTR-FAVPHLRYTKGKIVVLSSAASWLTAPRMSFYNASKAALVL 206
             F+ + ++N  G++  T+ FA   +    G I+ +SS  ++    ++  Y+A+KAA+  
Sbjct: 124 EGFEFVFDLNLLGTLLPTQVFAKDMVGRKGGNIINISSMNAFTPLTKVPAYSAAKAAISN 183

Query: 207 FFETLRVELGSDVG--VTIVTPGFIESE 232
           F + L V   + VG  V  + PGF  +E
Sbjct: 184 FTQWLAVHF-AKVGIRVNAIAPGFFLTE 210

Length = 278

>gnl|CDD|235794 PRK06398, PRK06398, aldose dehydrogenase; Validated

 Score = 92.2 bits (229), Expect = 2e-22
 Identities = 49/192 (25%), Positives = 88/192 (45%), Gaps = 14/192 (7%)

Query: 43  EDVSGKVVIITGASSGIGEHLAYEYARRGACLALCARREKSLEEVADTAREIGSPDVITI 102
             +  KV I+TG S GIG+ +       G+ +     +E S              DV   
Sbjct: 2   LGLKDKVAIVTGGSQGIGKAVVNRLKEEGSNVINFDIKEPS------------YNDVDYF 49

Query: 103 RADVSKVDDCRSLVEETMNHFGRLDHLVNNAGISSVALFEDIVNITDFKQIMNINFWGSV 162
           + DVS  +     ++  ++ +GR+D LVNNAGI S      +    ++ +I+N+N  G  
Sbjct: 50  KVDVSNKEQVIKGIDYVISKYGRIDILVNNAGIESYGAIHAV-EEDEWDRIINVNVNGIF 108

Query: 163 YTTRFAVPH-LRYTKGKIVVLSSAASWLTAPRMSFYNASKAALVLFFETLRVELGSDVGV 221
             +++ +P+ L+  KG I+ ++S  S+      + Y  SK A++    ++ V+    +  
Sbjct: 109 LMSKYTIPYMLKQDKGVIINIASVQSFAVTRNAAAYVTSKHAVLGLTRSIAVDYAPTIRC 168

Query: 222 TIVTPGFIESEL 233
             V PG I + L
Sbjct: 169 VAVCPGSIRTPL 180

Length = 258

>gnl|CDD|180439 PRK06171, PRK06171, sorbitol-6-phosphate 2-dehydrogenase; Provisional

 Score = 92.0 bits (229), Expect = 2e-22
 Identities = 59/197 (29%), Positives = 88/197 (44%), Gaps = 20/197 (10%)

Query: 44  DVSGKVVIITGASSGIGEHLAYEYARRGACLALCARREKSLEEVADTAREIGSPDVITIR 103
           ++ GK++I+TG SSGIG  +  E    GA +          +            +   + 
Sbjct: 6   NLQGKIIIVTGGSSGIGLAIVKELLANGANVVNADIHGGDGQH----------ENYQFVP 55

Query: 104 ADVSKVDDCRSLVEETMNHFGRLDHLVNNAGISSVALFED--------IVNITDFKQIMN 155
            DVS  ++    V E +  FGR+D LVNNAGI+   L  D         +N   F ++ N
Sbjct: 56  TDVSSAEEVNHTVAEIIEKFGRIDGLVNNAGINIPRLLVDEKDPAGKYELNEAAFDKMFN 115

Query: 156 INFWGSVYTTRFAVPHL-RYTKGKIVVLSSAASWLTAPRMSFYNASKAALVLFFETLRVE 214
           IN  G    ++     + +   G IV +SS A    +   S Y A+KAAL  F  +   E
Sbjct: 116 INQKGVFLMSQAVARQMVKQHDGVIVNMSSEAGLEGSEGQSCYAATKAALNSFTRSWAKE 175

Query: 215 LG-SDVGVTIVTPGFIE 230
           LG  ++ V  V PG +E
Sbjct: 176 LGKHNIRVVGVAPGILE 192

Length = 266

>gnl|CDD|171820 PRK12936, PRK12936, 3-ketoacyl-(acyl-carrier-protein) reductase NodG; Reviewed

 Score = 91.5 bits (227), Expect = 3e-22
 Identities = 64/193 (33%), Positives = 104/193 (53%), Gaps = 7/193 (3%)

Query: 44  DVSGKVVIITGASSGIGEHLAYEYARRGACLALCARREKSLEEVADTAREIGSPDVITIR 103
           D+SG+  ++TGAS GIGE +A     +GA + L   R + LE +A    E+G   V    
Sbjct: 3   DLSGRKALVTGASGGIGEEIARLLHAQGAIVGLHGTRVEKLEALAA---ELGE-RVKIFP 58

Query: 104 ADVSKVDDCRSLVEETMNHFGRLDHLVNNAGISSVALFEDIVNITDFKQIMNINFWGSVY 163
           A++S  D+ ++L ++       +D LVNNAGI+   LF  + +  D+  ++ +N   +  
Sbjct: 59  ANLSDRDEVKALGQKAEADLEGVDILVNNAGITKDGLFVRMSD-EDWDSVLEVNLTATFR 117

Query: 164 TTR-FAVPHLRYTKGKIVVLSSAASWLTAPRMSFYNASKAALVLFFETLRVELGS-DVGV 221
            TR    P +R   G+I+ ++S       P  + Y ASKA ++ F ++L  E+ + +V V
Sbjct: 118 LTRELTHPMMRRRYGRIINITSVVGVTGNPGQANYCASKAGMIGFSKSLAQEIATRNVTV 177

Query: 222 TIVTPGFIESELT 234
             V PGFIES +T
Sbjct: 178 NCVAPGFIESAMT 190

Length = 245

>gnl|CDD|181518 PRK08643, PRK08643, acetoin reductase; Validated

 Score = 90.9 bits (226), Expect = 5e-22
 Identities = 54/190 (28%), Positives = 96/190 (50%), Gaps = 7/190 (3%)

Query: 46  SGKVVIITGASSGIGEHLAYEYARRGACLALCARREKSLEEVADTAREIGSPDVITIRAD 105
             KV ++TGA  GIG  +A      G  +A+    E++ +  AD   + G    I ++AD
Sbjct: 1   MSKVALVTGAGQGIGFAIAKRLVEDGFKVAIVDYNEETAQAAADKLSKDGG-KAIAVKAD 59

Query: 106 VSKVDDCRSLVEETMNHFGRLDHLVNNAGISSVALFEDIVNITDFKQIMNINFWGSVYTT 165
           VS  D   + V + ++ FG L+ +VNNAG++     E I     F ++ NIN  G ++  
Sbjct: 60  VSDRDQVFAAVRQVVDTFGDLNVVVNNAGVAPTTPIETITE-EQFDKVYNINVGGVIWGI 118

Query: 166 RFAVPHLRYTK--GKIVVLSSAASWLTAPRMSFYNASKAALVLFFETLRVELGSDVGVTI 223
           + A    +     GKI+  +S A  +  P ++ Y+++K A+    +T   +L S+ G+T+
Sbjct: 119 QAAQEAFKKLGHGGKIINATSQAGVVGNPELAVYSSTKFAVRGLTQTAARDLASE-GITV 177

Query: 224 --VTPGFIES 231
               PG +++
Sbjct: 178 NAYAPGIVKT 187

Length = 256

>gnl|CDD|180604 PRK06523, PRK06523, short chain dehydrogenase; Provisional

 Score = 90.7 bits (226), Expect = 6e-22
 Identities = 51/201 (25%), Positives = 91/201 (45%), Gaps = 24/201 (11%)

Query: 41  FSEDVSGKVVIITGASSGIGEHLAYEYARRGACLALCARREKSLEEVADTAREIGSPDVI 100
           F  +++GK  ++TG + GIG          GA +   AR          +  +     V 
Sbjct: 3   FFLELAGKRALVTGGTKGIGAATVARLLEAGARVVTTAR----------SRPDDLPEGVE 52

Query: 101 TIRADVSKVDDCRSLVEETMNHFGRLDHLVNNAGISS------VALFEDIVNITDFKQIM 154
            + AD++  + C ++    +   G +D LV+  G SS       AL ++     +++  +
Sbjct: 53  FVAADLTTAEGCAAVARAVLERLGGVDILVHVLGGSSAPAGGFAALTDE-----EWQDEL 107

Query: 155 NINFWGSVYTTRFAVPHLRYT-KGKIVVLSSAASWLTAPRMSF-YNASKAALVLFFETLR 212
           N+N   +V   R  +P +     G I+ ++S    L  P  +  Y A+KAAL  + ++L 
Sbjct: 108 NLNLLAAVRLDRALLPGMIARGSGVIIHVTSIQRRLPLPESTTAYAAAKAALSTYSKSLS 167

Query: 213 VELGSD-VGVTIVTPGFIESE 232
            E+    V V  V+PG+IE+E
Sbjct: 168 KEVAPKGVRVNTVSPGWIETE 188

Length = 260

>gnl|CDD|168574 PRK06484, PRK06484, short chain dehydrogenase; Validated

 Score = 93.0 bits (231), Expect = 1e-21
 Identities = 62/200 (31%), Positives = 96/200 (48%), Gaps = 6/200 (3%)

Query: 46  SGKVVIITGASSGIGEHLAYEYARRGACLALCARREKSLEEVADTAREIGSPDVITIRAD 105
           S +VV ITG + GIG  +A  +A  G  L +  R  +  +++A+     G    ++++AD
Sbjct: 268 SPRVVAITGGARGIGRAVADRFAAAGDRLLIIDRDAEGAKKLAEAL---GDEH-LSVQAD 323

Query: 106 VSKVDDCRSLVEETMNHFGRLDHLVNNAGISSVALFEDIVNITDFKQIMNINFWGSVYTT 165
           ++      S   +    +GRLD LVNNAGI+ V       +  DF ++ ++N  G+    
Sbjct: 324 ITDEAAVESAFAQIQARWGRLDVLVNNAGIAEVFKPSLEQSAEDFTRVYDVNLSGAFACA 383

Query: 166 RFAVPHLRYTKGKIVVLSSAASWLTAPRMSFYNASKAALVLFFETLRVELGS-DVGVTIV 224
           R A   +    G IV L S AS L  P  + Y ASKAA+ +   +L  E     + V  V
Sbjct: 384 RAAARLMS-QGGVIVNLGSIASLLALPPRNAYCASKAAVTMLSRSLACEWAPAGIRVNTV 442

Query: 225 TPGFIESELTQGKFLTGRRQ 244
            PG+IE+        +GR  
Sbjct: 443 APGYIETPAVLALKASGRAD 462

Length = 520

>gnl|CDD|180399 PRK06101, PRK06101, short chain dehydrogenase; Provisional

 Score = 89.5 bits (222), Expect = 1e-21
 Identities = 61/193 (31%), Positives = 93/193 (48%), Gaps = 23/193 (11%)

Query: 49  VVIITGASSGIGEHLAYEYARRGACLALCARREKSLEEVADTAREIGSPDVITIRADVSK 108
            V+ITGA+SGIG+ LA +YA++G  +  C R +  L+E+   +  I      T+  DV+ 
Sbjct: 3   AVLITGATSGIGKQLALDYAKQGWQVIACGRNQSVLDELHTQSANIF-----TLAFDVTD 57

Query: 109 VDDCRSLVEETMNHFGRL----DHLVNNAGISSVALFED-IVNITDFKQIMNINFWGSVY 163
                     T     +L    +  + NAG       +D  V+ T   ++ N+N  G   
Sbjct: 58  -------HPGTKAALSQLPFIPELWIFNAG--DCEYMDDGKVDATLMARVFNVNVLGVAN 108

Query: 164 TTRFAVPHLRYTKG-KIVVLSSAASWLTAPRMSFYNASKAALVLFFETLRVELGSD-VGV 221
                 PHL    G ++V++ S AS L  PR   Y ASKAA+  F  TL+++L    + V
Sbjct: 109 CIEGIQPHLS--CGHRVVIVGSIASELALPRAEAYGASKAAVAYFARTLQLDLRPKGIEV 166

Query: 222 TIVTPGFIESELT 234
             V PGF+ + LT
Sbjct: 167 VTVFPGFVATPLT 179

Length = 240

>gnl|CDD|181131 PRK07814, PRK07814, short chain dehydrogenase; Provisional

 Score = 89.5 bits (222), Expect = 2e-21
 Identities = 51/185 (27%), Positives = 82/185 (44%), Gaps = 4/185 (2%)

Query: 47  GKVVIITGASSGIGEHLAYEYARRGACLALCARREKSLEEVADTAREIGSPDVITIRADV 106
            +V ++TGA  G+G  +A  +A  GA + + AR E  L+EVA+  R  G    + + AD+
Sbjct: 10  DQVAVVTGAGRGLGAAIALAFAEAGADVLIAARTESQLDEVAEQIRAAGRRAHV-VAADL 68

Query: 107 SKVDDCRSLVEETMNHFGRLDHLVNNAGISSVALFEDIVNITDFKQIMNINFWGSVYTTR 166
           +  +    L  + +  FGRLD +VNN G +            D       N   +   T 
Sbjct: 69  AHPEATAGLAGQAVEAFGRLDIVVNNVGGTMPNPLLSTST-KDLADAFTFNVATAHALTV 127

Query: 167 FAVPHLRYTK--GKIVVLSSAASWLTAPRMSFYNASKAALVLFFETLRVELGSDVGVTIV 224
            AVP +      G ++ +SS    L     + Y  +KAAL  +     ++L   + V  +
Sbjct: 128 AAVPLMLEHSGGGSVINISSTMGRLAGRGFAAYGTAKAALAHYTRLAALDLCPRIRVNAI 187

Query: 225 TPGFI 229
            PG I
Sbjct: 188 APGSI 192

Length = 263

>gnl|CDD|236116 PRK07856, PRK07856, short chain dehydrogenase; Provisional

 Score = 89.2 bits (222), Expect = 2e-21
 Identities = 59/202 (29%), Positives = 88/202 (43%), Gaps = 28/202 (13%)

Query: 44  DVSGKVVIITGASSGIGEHLAYEYARRGACLALCARREKSLEEVADTAREIGSPDVITIR 103
           D++G+VV++TG + GIG  +A  +   GA + +C RR    E V     E          
Sbjct: 3   DLTGRVVLVTGGTRGIGAGIARAFLAAGATVVVCGRRAP--ETVDGRPAE-------FHA 53

Query: 104 ADVSKVDDCRSLVEETMNHFGRLDHLVNNAGIS--------SVALFEDIVNITDFKQIMN 155
           ADV   D   +LV+  +   GRLD LVNNAG S        S    E IV          
Sbjct: 54  ADVRDPDQVAALVDAIVERHGRLDVLVNNAGGSPYALAAEASPRFHEKIV---------E 104

Query: 156 INFWGSVYTTRFAVPHLR--YTKGKIVVLSSAASWLTAPRMSFYNASKAALVLFFETLRV 213
           +N    +   + A   ++     G IV + S +    +P  + Y A+KA L+    +L V
Sbjct: 105 LNLLAPLLVAQAANAVMQQQPGGGSIVNIGSVSGRRPSPGTAAYGAAKAGLLNLTRSLAV 164

Query: 214 ELGSDVGVTIVTPGFIESELTQ 235
           E    V V  V  G + +E ++
Sbjct: 165 EWAPKVRVNAVVVGLVRTEQSE 186

Length = 252

>gnl|CDD|180771 PRK06947, PRK06947, glucose-1-dehydrogenase; Provisional

 Score = 88.7 bits (220), Expect = 3e-21
 Identities = 70/195 (35%), Positives = 94/195 (48%), Gaps = 12/195 (6%)

Query: 48  KVVIITGASSGIGEHLAYEYARRGACLAL-CARREKSLEEVADTAREIGSPDVITIRADV 106
           KVV+ITGAS GIG   A   A RG  + +  AR   + EE AD  R  G      +  DV
Sbjct: 3   KVVLITGASRGIGRATAVLAAARGWSVGINYARDAAAAEETADAVRAAGG-RACVVAGDV 61

Query: 107 SKVDDCRSLVEETMNHFGRLDHLVNNAGISSVALFEDIVNIT--DFKQIMNINFWGSVYT 164
           +   D  ++ +   + FGRLD LVNNAGI  VA    + ++     +++ + N  G+   
Sbjct: 62  ANEADVIAMFDAVQSAFGRLDALVNNAGI--VAPSMPLADMDAARLRRMFDTNVLGAYLC 119

Query: 165 TRFAVPHLRYTK----GKIVVLSSAASWLTAPRMSF-YNASKAALVLFFETLRVELGSD- 218
            R A   L   +    G IV +SS AS L +P     Y  SK A+      L  ELG   
Sbjct: 120 AREAARRLSTDRGGRGGAIVNVSSIASRLGSPNEYVDYAGSKGAVDTLTLGLAKELGPHG 179

Query: 219 VGVTIVTPGFIESEL 233
           V V  V PG IE+E+
Sbjct: 180 VRVNAVRPGLIETEI 194

Length = 248

>gnl|CDD|187623 cd05365, 7_alpha_HSDH_SDR_c, 7 alpha-hydroxysteroid dehydrogenase (7 alpha-HSDH), classical (c) SDRs

 Score = 88.4 bits (219), Expect = 3e-21
 Identities = 52/186 (27%), Positives = 96/186 (51%), Gaps = 3/186 (1%)

Query: 49  VVIITGASSGIGEHLAYEYARRGACLALCARREKSLEEVADTAREIGSPDVITIRADVSK 108
           V I+TG ++GIG+ +A   A+ GA + +   + +  E VA   ++ G    I +  +V+ 
Sbjct: 1   VAIVTGGAAGIGKAIAGTLAKAGASVVIADLKSEGAEAVAAAIQQAGG-QAIGLECNVTS 59

Query: 109 VDDCRSLVEETMNHFGRLDHLVNNAGISSVALFEDIVNITDFKQIMNINFWGSVYTTRFA 168
             D  ++V+ T++ FG +  LVNNAG      F+  +   DF+    +N + +   ++  
Sbjct: 60  EQDLEAVVKATVSQFGGITILVNNAGGGGPKPFDMPMTEEDFEWAFKLNLFSAFRLSQLC 119

Query: 169 VPHLRYTK-GKIVVLSSAASWLTAPRMSFYNASKAALVLFFETLRVELGSD-VGVTIVTP 226
            PH++    G I+ +SS +S     R++ Y +SKAA+      L  +LG   + V  V P
Sbjct: 120 APHMQKAGGGAILNISSMSSENKNVRIAAYGSSKAAVNHMTRNLAFDLGPKGIRVNAVAP 179

Query: 227 GFIESE 232
           G ++++
Sbjct: 180 GAVKTD 185

This bacterial subgroup contains 7 alpha-HSDHs, including Escherichia coli 7 alpha-HSDH. 7 alpha-HSDH, a member of the SDR family, catalyzes the NAD+ -dependent dehydrogenation of a hydroxyl group at position 7 of the steroid skeleton of bile acids. In humans the two primary bile acids are cholic and chenodeoxycholic acids, these are formed from cholesterol in the liver. Escherichia coli 7 alpha-HSDH dehydroxylates these bile acids in the human intestine. Mammalian 7 alpha-HSDH activity has been found in livers. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold (alpha/beta folding pattern with a central beta-sheet), an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Classical SDRs are typically about 250 residues long, while extended SDRS are approximately 350 residues. Sequence identity between different SDR enzymes are typically in the 15-30% range, but the enzymes share the Rossmann fold NAD-binding motif and characteristic NAD-binding and catalytic sequence patterns. These enzymes have a 3-glycine N-terminal NAD(P)(H)-binding pattern (typically, TGxxxGxG in classical SDRs and TGxxGxxG in extended SDRs), while substrate binding is in the C-terminal region. A critical catalytic Tyr residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase (15-PGDH) numbering), is often found in a conserved YXXXK pattern. In addition to the Tyr and Lys, there is often an upstream Ser (Ser-138, 15-PGDH numbering) and/or an Asn (Asn-107, 15-PGDH numbering) or additional Ser, contributing to the active site. Substrates for these enzymes include sugars, steroids, alcohols, and aromatic compounds. The standard reaction mechanism is a proton relay involving the conserved Tyr and Lys, as well as Asn (or Ser). Some SDR family members, including 17 beta-hydroxysteroid dehydrogenase contain an additional helix-turn-helix motif that is not generally found among SDRs. Length = 242

>gnl|CDD|226476 COG3967, DltE, Short-chain dehydrogenase involved in D-alanine esterification of lipoteichoic acid and wall teichoic acid (D-alanine transfer protein) [Cell envelope biogenesis, outer membrane]

 Score = 88.3 bits (219), Expect = 4e-21
 Identities = 56/196 (28%), Positives = 91/196 (46%), Gaps = 14/196 (7%)

Query: 46  SGKVVIITGASSGIGEHLAYEYARRGACLALCARREKSLEEVADTAREIGSPDVITIRAD 105
           +G  ++ITG +SGIG  LA  +   G  + +C R E+ L E         +P++ T   D
Sbjct: 4   TGNTILITGGASGIGLALAKRFLELGNTVIICGRNEERLAEAKA-----ENPEIHTEVCD 58

Query: 106 VSKVDDCRSLVEETMNHFGRLDHLVNNAGISSVALFEDIVNITDF----KQIMNINFWGS 161
           V+  D  R LVE     +  L+ L+NNAGI      ED+    D     +Q +  N    
Sbjct: 59  VADRDSRRELVEWLKKEYPNLNVLINNAGIQRN---EDLTGAEDLLDDAEQEIATNLLAP 115

Query: 162 VYTTRFAVPHL-RYTKGKIVVLSSAASWLTAPRMSFYNASKAALVLFFETLRVEL-GSDV 219
           +  T   +PHL R  +  I+ +SS  +++       Y A+KAA+  +   LR +L  + V
Sbjct: 116 IRLTALLLPHLLRQPEATIINVSSGLAFVPMASTPVYCATKAAIHSYTLALREQLKDTSV 175

Query: 220 GVTIVTPGFIESELTQ 235
            V  + P  +++    
Sbjct: 176 EVIELAPPLVDTTEGN 191

Length = 245

>gnl|CDD|236145 PRK08063, PRK08063, enoyl-(acyl carrier protein) reductase; Provisional

 Score = 87.9 bits (218), Expect = 7e-21
 Identities = 60/192 (31%), Positives = 94/192 (48%), Gaps = 9/192 (4%)

Query: 46  SGKVVIITGASSGIGEHLAYEYARRGACLALC-ARREKSLEEVADTAREIGSPDVITIRA 104
           SGKV ++TG+S GIG+ +A   A  G  +A+  AR  K+ EE A+    +G    + ++A
Sbjct: 3   SGKVALVTGSSRGIGKAIALRLAEEGYDIAVNYARSRKAAEETAEEIEALGR-KALAVKA 61

Query: 105 DVSKVDDCRSLVEETMNHFGRLDHLVNNAGISSV--ALFEDIVNITDFKQIMNINFWGSV 162
           +V  V+  + +  +    FGRLD  VNNA  S V     E  +  + +   MNIN    +
Sbjct: 62  NVGDVEKIKEMFAQIDEEFGRLDVFVNNAA-SGVLRPAME--LEESHWDWTMNINAKALL 118

Query: 163 YTTRFAVPHL-RYTKGKIVVLSSAASWLTAPRMSFYNASKAALVLFFETLRVELGSD-VG 220
           +  + A   + +   GKI+ LSS  S       +    SKAAL      L VEL    + 
Sbjct: 119 FCAQEAAKLMEKVGGGKIISLSSLGSIRYLENYTTVGVSKAALEALTRYLAVELAPKGIA 178

Query: 221 VTIVTPGFIESE 232
           V  V+ G ++++
Sbjct: 179 VNAVSGGAVDTD 190

Length = 250

>gnl|CDD|235813 PRK06482, PRK06482, short chain dehydrogenase; Provisional

 Score = 88.2 bits (219), Expect = 8e-21
 Identities = 58/182 (31%), Positives = 88/182 (48%), Gaps = 15/182 (8%)

Query: 52  ITGASSGIGEHLAYEYARRGACLALCARREKSLEEVADTAREIGSPDVITIRA-DVSKVD 110
           ITGASSG G  +      RG  +A   RR  +L+++          D + +   DV+   
Sbjct: 7   ITGASSGFGRGMTERLLARGDRVAATVRRPDALDDLKAR-----YGDRLWVLQLDVTDSA 61

Query: 111 DCRSLVEETMNHFGRLDHLVNNAGISSVALFEDIVNITDFKQI---MNINFWGSVYTTRF 167
             R++V+      GR+D +V+NAG     LF     ++D  QI   ++ N  GS+   R 
Sbjct: 62  AVRAVVDRAFAALGRIDVVVSNAG---YGLFGAAEELSD-AQIRRQIDTNLIGSIQVIRA 117

Query: 168 AVPHLRYTKG-KIVVLSSAASWLTAPRMSFYNASKAALVLFFETLRVELGS-DVGVTIVT 225
           A+PHLR   G +IV +SS    +  P  S Y+A+K  +  F E +  E+    +  TIV 
Sbjct: 118 ALPHLRRQGGGRIVQVSSEGGQIAYPGFSLYHATKWGIEGFVEAVAQEVAPFGIEFTIVE 177

Query: 226 PG 227
           PG
Sbjct: 178 PG 179

Length = 276

>gnl|CDD|187615 cd05357, PR_SDR_c, pteridine reductase (PR), classical (c) SDRs

 Score = 86.9 bits (216), Expect = 1e-20
 Identities = 45/187 (24%), Positives = 72/187 (38%), Gaps = 10/187 (5%)

Query: 48  KVVIITGASSGIGEHLAYEYARRGACLALCARR-EKSLEEVADTAREIGSPDVITIRADV 106
            V ++TGA+  IG  +A   A  G  + +   R E   + + D    + +   + ++AD+
Sbjct: 1   AVALVTGAAKRIGRAIAEALAAEGYRVVVHYNRSEAEAQRLKDELNALRN-SAVLVQADL 59

Query: 107 SKVDDCRSLVEETMNHFGRLDHLVNNAGI---SSVALFEDIVNITDFKQIMNINFWGSVY 163
           S    C  LV      FGR D LVNNA     + +          +   +  IN      
Sbjct: 60  SDFAACADLVAAAFRAFGRCDVLVNNASAFYPTPL-GQGSEDAWAE---LFGINLKAPYL 115

Query: 164 TTRFAVPHLR-YTKGKIVVLSSAASWLTAPRMSFYNASKAALVLFFETLRVELGSDVGVT 222
             +     L     G I+ +  A +         Y  SKAAL     +  +EL  ++ V 
Sbjct: 116 LIQAFARRLAGSRNGSIINIIDAMTDRPLTGYFAYCMSKAALEGLTRSAALELAPNIRVN 175

Query: 223 IVTPGFI 229
            + PG I
Sbjct: 176 GIAPGLI 182

Pteridine reductases (PRs), members of the SDR family, catalyzes the NAD-dependent reduction of folic acid, dihydrofolate and related compounds. In Leishmania, pteridine reductase (PTR1) acts to circumvent the anti-protozoan drugs that attack dihydrofolate reductase activity. Proteins in this subgroup have an N-terminal NAD-binding motif and a YxxxK active site motif, but have an Asp instead of the usual upstream catalytic Ser. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold (alpha/beta folding pattern with a central beta-sheet), an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Classical SDRs are typically about 250 residues long, while extended SDRS are approximately 350 residues. Sequence identity between different SDR enzymes are typically in the 15-30% range, but the enzymes share the Rossmann fold NAD-binding motif and characteristic NAD-binding and catalytic sequence patterns. These enzymes have a 3-glycine N-terminal NAD(P)(H)-binding pattern (typically, TGxxxGxG in classical SDRs and TGxxGxxG in extended SDRs), while substrate binding is in the C-terminal region. A critical catalytic Tyr residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase (15-PGDH) numbering), is often found in a conserved YXXXK pattern. In addition to the Tyr and Lys, there is often an upstream Ser (Ser-138, 15-PGDH numbering) and/or an Asn (Asn-107, 15-PGDH numbering) or additional Ser, contributing to the active site. Substrates for these enzymes include sugars, steroids, alcohols, and aromatic compounds. The standard reaction mechanism is a proton relay involving the conserved Tyr and Lys, as well as Asn (or Ser). Some SDR family members, including 17 beta-hydroxysteroid dehydrogenase contain an additional helix-turn-helix motif that is not generally found among SDRs. Length = 234

>gnl|CDD|187585 cd05324, carb_red_PTCR-like_SDR_c, Porcine testicular carbonyl reductase (PTCR)-like, classical (c) SDRs

 Score = 86.5 bits (215), Expect = 1e-20
 Identities = 58/194 (29%), Positives = 91/194 (46%), Gaps = 10/194 (5%)

Query: 48  KVVIITGASSGIGEHLAYEYARRGAC-LALCAR-REKSLEEVADTAREIGSPDVITIRAD 105
           KV ++TGA+ GIG  +  + A+ G   + L AR  E+    V     E  S     +  D
Sbjct: 1   KVALVTGANRGIGFEIVRQLAKSGPGTVILTARDVERGQAAVEKLRAEGLSVRFHQL--D 58

Query: 106 VSKVDDCRSLVEETMNHFGRLDHLVNNAGISSVALFEDIVNITDFKQIMNINFWGSVYTT 165
           V+      +  +     +G LD LVNNAGI+     +        ++ M  NF+G+V  T
Sbjct: 59  VTDDASIEAAADFVEEKYGGLDILVNNAGIAFKGFDDSTPTREQARETMKTNFFGTVDVT 118

Query: 166 RFAVPHLRYTK-GKIVVLSSAASWLTAPRMSFYNASKAALVLFFETLRVELGSD-VGVTI 223
           +  +P L+ +  G+IV +SS    LT+     Y  SKAAL      L  EL    + V  
Sbjct: 119 QALLPLLKKSPAGRIVNVSSGLGSLTSA----YGVSKAALNALTRILAKELKETGIKVNA 174

Query: 224 VTPGFIESELTQGK 237
             PG++++++  GK
Sbjct: 175 CCPGWVKTDMGGGK 188

PTCR is a classical SDR which catalyzes the NADPH-dependent reduction of ketones on steroids and prostaglandins. Unlike most SDRs, PTCR functions as a monomer. This subgroup also includes human carbonyl reductase 1 (CBR1) and CBR3. CBR1 is an NADPH-dependent SDR with broad substrate specificity and may be responsible for the in vivo reduction of quinones, prostaglandins, and other carbonyl-containing compounds. In addition it includes poppy NADPH-dependent salutaridine reductase which catalyzes the stereospecific reduction of salutaridine to 7(S)-salutaridinol in the biosynthesis of morphine, and Arabidopsis SDR1,a menthone reductase, which catalyzes the reduction of menthone to neomenthol, a compound with antimicrobial activity; SDR1 can also carry out neomenthol oxidation. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold (alpha/beta folding pattern with a central beta-sheet), an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Classical SDRs are typically about 250 residues long, while extended SDRs are approximately 350 residues. Sequence identity between different SDR enzymes are typically in the 15-30% range, but the enzymes share the Rossmann fold NAD-binding motif and characteristic NAD-binding and catalytic sequence patterns. These enzymes catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, 15-hydroxyprostaglandin dehydrogenase (15-PGDH) numbering). In addition to the Tyr and Lys, there is often an upstream Ser (Ser-138, 15-PGDH numbering) and/or an Asn (Asn-107, 15-PGDH numbering) contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. Extended SDRs have additional elements in the C-terminal region, and typically have a TGXXGXXG cofactor binding motif. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid synthase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type ketoacyl reductases have a TGXXXGX(1-2)G NAD(P)-binding motif. Some atypical SDRs have lost catalytic activity and/or have an unusual NAD(P)-binding motif and missing or unusual active site residues. Reactions catalyzed within the SDR family include isomerization, decarboxylation, epimerization, C=N bond reduction, dehydratase activity, dehalogenation, Enoyl-CoA reduction, and carbonyl-alcohol oxidoreduction. Length = 225

>gnl|CDD|187592 cd05331, DH-DHB-DH_SDR_c, 2,3 dihydro-2,3 dihydrozybenzoate dehydrogenases, classical (c) SDRs

 Score = 87.1 bits (216), Expect = 1e-20
 Identities = 52/189 (27%), Positives = 84/189 (44%), Gaps = 11/189 (5%)

Query: 50  VIITGASSGIGEHLAYEYARRGACLALCARREKSLEEVADTAREIGSPDVITIRADVSKV 109
           VI+TGA+ GIG  +A    + GA +         L E  D  R            DV+  
Sbjct: 1   VIVTGAAQGIGRAVARHLLQAGATVIALDLPFVLLLEYGDPLR--------LTPLDVADA 52

Query: 110 DDCRSLVEETMNHFGRLDHLVNNAGISSVALFEDIVNITDFKQIMNINFWGSVYTTRFAV 169
              R +    +   G +D LVN AG+       D ++  D++Q   +N  G     +   
Sbjct: 53  AAVREVCSRLLAEHGPIDALVNCAGVLRPGAT-DPLSTEDWEQTFAVNVTGVFNLLQAVA 111

Query: 170 PHLRYTK-GKIVVLSSAASWLTAPRMSFYNASKAALVLFFETLRVEL-GSDVGVTIVTPG 227
           PH++  + G IV ++S A+ +    M+ Y ASKAAL    + L +EL    V   +V+PG
Sbjct: 112 PHMKDRRTGAIVTVASNAAHVPRISMAAYGASKAALASLSKCLGLELAPYGVRCNVVSPG 171

Query: 228 FIESELTQG 236
             ++ + + 
Sbjct: 172 STDTAMQRT 180

2,3 dihydro-2,3 dihydrozybenzoate dehydrogenase shares the characteristics of the classical SDRs. This subgroup includes Escherichai coli EntA which catalyzes the NAD+-dependent oxidation of 2,3-dihydro-2,3-dihydroxybenzoate to 2,3-dihydroxybenzoate during biosynthesis of the siderophore Enterobactin. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold (alpha/beta folding pattern with a central beta-sheet), an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Classical SDRs are typically about 250 residues long, while extended SDRs are approximately 350 residues. Sequence identity between different SDR enzymes are typically in the 15-30% range, but the enzymes share the Rossmann fold NAD-binding motif and characteristic NAD-binding and catalytic sequence patterns. These enzymes catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase (15-PGDH) numbering). In addition to the Tyr and Lys, there is often an upstream Ser (Ser-138, 15-PGDH numbering) and/or an Asn (Asn-107, 15-PGDH numbering) contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. Extended SDRs have additional elements in the C-terminal region, and typically have a TGXXGXXG cofactor binding motif. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid synthase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type ketoacyl reductases have a TGXXXGX(1-2)G NAD(P)-binding motif. Some atypical SDRs have lost catalytic activity and/or have an unusual NAD(P)-binding motif and missing or unusual active site residues. Reactions catalyzed within the SDR family include isomerization, decarboxylation, epimerization, C=N bond reduction, dehydratase activity, dehalogenation, Enoyl-CoA reduction, and carbonyl-alcohol oxidoreduction. Length = 244

>gnl|CDD|187599 cd05340, Ycik_SDR_c, Escherichia coli K-12 YCIK-like, classical (c) SDRs

 Score = 86.9 bits (215), Expect = 1e-20
 Identities = 49/187 (26%), Positives = 84/187 (44%), Gaps = 4/187 (2%)

Query: 45  VSGKVVIITGASSGIGEHLAYEYARRGACLALCARREKSLEEVADTAREIG--SPDVITI 102
           ++ +++++TGAS GIG   A  YAR GA + L  R E+ L +VAD   E G   P    +
Sbjct: 2   LNDRIILVTGASDGIGREAALTYARYGATVILLGRNEEKLRQVADHINEEGGRQPQWFIL 61

Query: 103 RADVSKVDDCRSLVEETMNHFGRLDHLVNNAGISSVALFEDIVNITDFKQIMNINFWGSV 162
                  ++C+ L +    ++ RLD +++NAG+          N   ++ +  +N   + 
Sbjct: 62  DLLTCTSENCQQLAQRIAVNYPRLDGVLHNAGLLGDVCPLSEQNPQVWQDVXQVNVNATF 121

Query: 163 YTTRFAVPHL-RYTKGKIVVLSSAASWLTAPRMSFYNASKAALVLFFETLRVEL-GSDVG 220
             T+  +P L +   G +V  SS+           Y  SK A     + L  E    ++ 
Sbjct: 122 MLTQALLPLLLKSDAGSLVFTSSSVGRQGRANWGAYAVSKFATEGLXQVLADEYQQRNLR 181

Query: 221 VTIVTPG 227
           V  + PG
Sbjct: 182 VNCINPG 188

Escherichia coli K-12 YCIK and related proteins have a canonical classical SDR nucleotide-binding motif and active site tetrad. They are predicted oxoacyl-(acyl carrier protein/ACP) reductases. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold (alpha/beta folding pattern with a central beta-sheet), an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Classical SDRs are typically about 250 residues long, while extended SDRS are approximately 350 residues. Sequence identity between different SDR enzymes are typically in the 15-30% range, but the enzymes share the Rossmann fold NAD-binding motif and characteristic NAD-binding and catalytic sequence patterns. These enzymes have a 3-glycine N-terminal NAD(P)(H)-binding pattern (typically, TGxxxGxG in classical SDRs and TGxxGxxG in extended SDRs), while substrate binding is in the C-terminal region. A critical catalytic Tyr residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase (15-PGDH) numbering), is often found in a conserved YXXXK pattern. In addition to the Tyr and Lys, there is often an upstream Ser (Ser-138, 15-PGDH numbering) and/or an Asn (Asn-107, 15-PGDH numbering) or additional Ser, contributing to the active site. Substrates for these enzymes include sugars, steroids, alcohols, and aromatic compounds. The standard reaction mechanism is a proton relay involving the conserved Tyr and Lys, as well as Asn (or Ser). Some SDR family members, including 17 beta-hydroxysteroid dehydrogenase contain an additional helix-turn-helix motif that is not generally found among SDRs. Length = 236

>gnl|CDD|187641 cd08936, CR_SDR_c, Porcine peroxisomal carbonyl reductase like, classical (c) SDR

 Score = 87.2 bits (216), Expect = 2e-20
 Identities = 53/198 (26%), Positives = 105/198 (53%), Gaps = 7/198 (3%)

Query: 42  SEDVSGKVVIITGASSGIGEHLAYEYARRGACLALCARREKSLEEVADTAREIGSPDVIT 101
            + ++ KV ++T ++ GIG  +A   A+ GA + + +R++++++    T +  G   V  
Sbjct: 5   RDPLANKVALVTASTDGIGLAIARRLAQDGAHVVVSSRKQQNVDRAVATLQGEGL-SVTG 63

Query: 102 IRADVSKVDDCRSLVEETMNHFGRLDHLVNNAGISSVALFEDIVNITD--FKQIMNINFW 159
               V K +D   LV   +N  G +D LV+NA ++    F +I++ T+  + +I+++N  
Sbjct: 64  TVCHVGKAEDRERLVATAVNLHGGVDILVSNAAVN--PFFGNILDSTEEVWDKILDVNVK 121

Query: 160 GSVYTTRFAVPHL-RYTKGKIVVLSSAASWLTAPRMSFYNASKAALVLFFETLRVELG-S 217
            +   T+  VP + +   G +V++SS A++   P +  YN SK AL+   + L  EL   
Sbjct: 122 ATALMTKAVVPEMEKRGGGSVVIVSSVAAFHPFPGLGPYNVSKTALLGLTKNLAPELAPR 181

Query: 218 DVGVTIVTPGFIESELTQ 235
           ++ V  + PG I++  + 
Sbjct: 182 NIRVNCLAPGLIKTSFSS 199

This subgroup contains porcine peroxisomal carbonyl reductase and similar proteins. The porcine enzyme efficiently reduces retinals. This subgroup also includes human dehydrogenase/reductase (SDR family) member 4 (DHRS4), and human DHRS4L1. DHRS4 is a peroxisomal enzyme with 3beta-hydroxysteroid dehydrogenase activity; it catalyzes the reduction of 3-keto-C19/C21-steroids into 3beta-hydroxysteroids more efficiently than it does the retinal reduction. The human DHRS4 gene cluster contains DHRS4, DHRS4L2 and DHRS4L1. DHRS4L2 and DHRS4L1 are paralogs of DHRS4, DHRS4L2 being the most recent member. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold (alpha/beta folding pattern with a central beta-sheet), an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Classical SDRs are typically about 250 residues long, while extended SDRs are approximately 350 residues. Sequence identity between different SDR enzymes are typically in the 15-30% range, but the enzymes share the Rossmann fold NAD-binding motif and characteristic NAD-binding and catalytic sequence patterns. These enzymes catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase (15-PGDH) numbering). In addition to the Tyr and Lys, there is often an upstream Ser (Ser-138, 15-PGDH numbering) and/or an Asn (Asn-107, 15-PGDH numbering) contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. Extended SDRs have additional elements in the C-terminal region, and typically have a TGXXGXXG cofactor binding motif. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid synthase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type ketoacyl reductases have a TGXXXGX(1-2)G NAD(P)-binding motif. Some atypical SDRs have lost catalytic activity and/or have an unusual NAD(P)-binding motif and missing or unusual active site residues. Reactions catalyzed within the SDR family include isomerization, decarboxylation, epimerization, C=N bond reduction, dehydratase activity, dehalogenation, Enoyl-CoA reduction, and carbonyl-alcohol oxidoreduction. Length = 256

>gnl|CDD|181491 PRK08589, PRK08589, short chain dehydrogenase; Validated

 Score = 87.1 bits (216), Expect = 2e-20
 Identities = 59/190 (31%), Positives = 97/190 (51%), Gaps = 9/190 (4%)

Query: 48  KVVIITGASSGIGEHLAYEYARRGACLALCARREKSLEEVADTAREIGSPDVITIRADVS 107
           KV +ITGAS+GIG+  A   A+ GA + L     +++ E  D  +  G         D+S
Sbjct: 7   KVAVITGASTGIGQASAIALAQEGAYV-LAVDIAEAVSETVDKIKSNGG-KAKAYHVDIS 64

Query: 108 KVDDCRSLVEETMNHFGRLDHLVNNAGISSVA--LFEDIVNITDFKQIMNINFWGSVYTT 165
                +    E    FGR+D L NNAG+ + A  + E  V++  F +IM ++  G+   T
Sbjct: 65  DEQQVKDFASEIKEQFGRVDVLFNNAGVDNAAGRIHEYPVDV--FDKIMAVDMRGTFLMT 122

Query: 166 RFAVPHLRYTKGKIVVLSSAASWLTAP-RMSFYNASKAALVLFFETLRVELGSD-VGVTI 223
           +  +P L   +G  ++ +S+ S   A    S YNA+K A++ F +++ +E G D +    
Sbjct: 123 KMLLP-LMMEQGGSIINTSSFSGQAADLYRSGYNAAKGAVINFTKSIAIEYGRDGIRANA 181

Query: 224 VTPGFIESEL 233
           + PG IE+ L
Sbjct: 182 IAPGTIETPL 191

Length = 272

>gnl|CDD|187607 cd05349, BKR_2_SDR_c, putative beta-ketoacyl acyl carrier protein [ACP]reductase (BKR), subgroup 2, classical (c) SDR

 Score = 86.7 bits (215), Expect = 2e-20
 Identities = 53/193 (27%), Positives = 92/193 (47%), Gaps = 12/193 (6%)

Query: 48  KVVIITGASSGIGEHLAYEYARRGACLALCARREKSLEEVADTAREIGSPDVITIRADVS 107
           +VV++TGAS G+G  +A  +AR GA + +   R     E A+          I I+ADV 
Sbjct: 1   QVVLVTGASRGLGAAIARSFAREGARVVVNYYRST---ESAEAVAAEAGERAIAIQADVR 57

Query: 108 KVDDCRSLVEETMNHFGRLDHLVNNAGISSV------ALFEDIVNITDFKQIMNINFWGS 161
             D  ++++EE  NHFG +D +VNNA I           F+ I +  D++Q +     G+
Sbjct: 58  DRDQVQAMIEEAKNHFGPVDTIVNNALIDFPFDPDQRKTFDTI-DWEDYQQQLEGAVKGA 116

Query: 162 VYTTRFAVPHLRYTK-GKIVVLSSAASWLTAPRMSFYNASKAALVLFFETLRVELGSD-V 219
           +   +  +P  +    G+++ + +            Y  +KAAL+ F   +  ELG   +
Sbjct: 117 LNLLQAVLPDFKERGSGRVINIGTNLFQNPVVPYHDYTTAKAALLGFTRNMAKELGPYGI 176

Query: 220 GVTIVTPGFIESE 232
            V +V+ G ++  
Sbjct: 177 TVNMVSGGLLKVT 189

This subgroup includes Rhizobium sp. NGR234 FabG1. The Escherichai coli K12 BKR, FabG, belongs to a different subgroup. BKR catalyzes the NADPH-dependent reduction of ACP in the first reductive step of de novo fatty acid synthesis (FAS). FAS consists of four elongation steps, which are repeated to extend the fatty acid chain through the addition of two-carbo units from malonyl acyl-carrier protein (ACP): condensation, reduction, dehydration, and a final reduction. Type II FAS, typical of plants and many bacteria, maintains these activities on discrete polypeptides, while type I FAS utilizes one or two multifunctional polypeptides. BKR resembles enoyl reductase, which catalyzes the second reduction step in FAS. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold (alpha/beta folding pattern with a central beta-sheet), an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Classical SDRs are typically about 250 residues long, while extended SDRS are approximately 350 residues. Sequence identity between different SDR enzymes are typically in the 15-30% range, but the enzymes share the Rossmann fold NAD-binding motif and characteristic NAD-binding and catalytic sequence patterns. These enzymes have a 3-glycine N-terminal NAD(P)(H)-binding pattern (typically, TGxxxGxG in classical SDRs and TGxxGxxG in extended SDRs), while substrate binding is in the C-terminal region. A critical catalytic Tyr residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase (15-PGDH) numbering), is often found in a conserved YXXXK pattern. In addition to the Tyr and Lys, there is often an upstream Ser (Ser-138, 15-PGDH numbering) and/or an Asn (Asn-107, 15-PGDH numbering) or additional Ser, contributing to the active site. Substrates for these enzymes include sugars, steroids, alcohols, and aromatic compounds. The standard reaction mechanism is a proton relay involving the conserved Tyr and Lys, as well as Asn (or Ser). Some SDR family members, including 17 beta-hydroxysteroid dehydrogenase contain an additional helix-turn-helix motif that is not generally found among SDRs. Length = 246

>gnl|CDD|188170 TIGR01832, kduD, 2-deoxy-D-gluconate 3-dehydrogenase

 Score = 86.4 bits (214), Expect = 3e-20
 Identities = 59/195 (30%), Positives = 99/195 (50%), Gaps = 7/195 (3%)

Query: 44  DVSGKVVIITGASSGIGEHLAYEYARRGACLALCARREKSLEEVADTAREIGSPDVITIR 103
            + GKV ++TGA++G+G+ +A   A  GA +    R E S  E       +G    +++ 
Sbjct: 2   SLEGKVALVTGANTGLGQGIAVGLAEAGADIVGAGRSEPS--ETQQQVEALGR-RFLSLT 58

Query: 104 ADVSKVDDCRSLVEETMNHFGRLDHLVNNAGISSVALFEDIVNITDFKQIMNINFWGSVY 163
           AD+S ++  ++LV+  +  FG +D LVNNAGI   A  E+     D+  +MN+N     +
Sbjct: 59  ADLSDIEAIKALVDSAVEEFGHIDILVNNAGIIRRADAEEFSE-KDWDDVMNVNLKSVFF 117

Query: 164 TTRFAVPHL--RYTKGKIVVLSSAASWLTAPRMSFYNASKAALVLFFETLRVELG-SDVG 220
            T+ A  H   +   GKI+ ++S  S+    R+  Y ASK A+    + L  E     + 
Sbjct: 118 LTQAAAKHFLKQGRGGKIINIASMLSFQGGIRVPSYTASKHAVAGLTKLLANEWAAKGIN 177

Query: 221 VTIVTPGFIESELTQ 235
           V  + PG++ +  TQ
Sbjct: 178 VNAIAPGYMATNNTQ 192

This model describes 2-deoxy-D-gluconate 3-dehydrogenase (also called 2-keto-3-deoxygluconate oxidoreductase), a member of the family of short-chain-alcohol dehydrogenases (pfam00106). This protein has been characterized in Erwinia chrysanthemi as an enzyme of pectin degradation [Energy metabolism, Biosynthesis and degradation of polysaccharides]. Length = 248

>gnl|CDD|187611 cd05353, hydroxyacyl-CoA-like_DH_SDR_c-like, (3R)-hydroxyacyl-CoA dehydrogenase-like, classical(c)-like SDRs

 Score = 85.8 bits (213), Expect = 4e-20
 Identities = 56/181 (30%), Positives = 88/181 (48%), Gaps = 19/181 (10%)

Query: 47  GKVVIITGASSGIGEHLAYEYARRGAC---------LALCARREKSLEEVADTAREIGSP 97
           G+VV++TGA  G+G   A  +A RGA               +   + ++V D  +  G  
Sbjct: 5   GRVVLVTGAGGGLGRAYALAFAERGAKVVVNDLGGDRKGSGKSSSAADKVVDEIKAAGGK 64

Query: 98  DVITIRADVSKVDDCRSLVEETMNHFGRLDHLVNNAGISSVALFEDIVNIT--DFKQIMN 155
            V    A+   V+D   +V+  ++ FGR+D LVNNAGI     F     ++  D+  +M 
Sbjct: 65  AV----ANYDSVEDGEKIVKTAIDAFGRVDILVNNAGILRDRSF---AKMSEEDWDLVMR 117

Query: 156 INFWGSVYTTRFAVPHLRYTK-GKIVVLSSAASWLTAPRMSFYNASKAALVLFFETLRVE 214
           ++  GS   TR A P++R  K G+I+  SSAA        + Y+A+K  L+    TL +E
Sbjct: 118 VHLKGSFKVTRAAWPYMRKQKFGRIINTSSAAGLYGNFGQANYSAAKLGLLGLSNTLAIE 177

Query: 215 L 215
            
Sbjct: 178 G 178

Beta oxidation of fatty acids in eukaryotes occurs by a four-reaction cycle, that may take place in mitochondria or in peroxisomes. (3R)-hydroxyacyl-CoA dehydrogenase is part of rat peroxisomal multifunctional MFE-2, it is a member of the NAD-dependent SDRs, but contains an additional small C-terminal domain that completes the active site pocket and participates in dimerization. The atypical, additional C-terminal extension allows for more extensive dimerization contact than other SDRs. MFE-2 catalyzes the second and third reactions of the peroxisomal beta oxidation cycle. Proteins in this subgroup have a typical catalytic triad, but have a His in place of the usual upstream Asn. This subgroup also contains members identified as 17-beta-hydroxysteroid dehydrogenases, including human peroxisomal 17-beta-hydroxysteroid dehydrogenase type 4 (17beta-HSD type 4, aka MFE-2, encoded by HSD17B4 gene) which is involved in fatty acid beta-oxidation and steroid metabolism. This subgroup also includes two SDR domains of the Neurospora crassa and Saccharomyces cerevisiae multifunctional beta-oxidation protein (MFP, aka Fox2). SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold (alpha/beta folding pattern with a central beta-sheet), an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Classical SDRs are typically about 250 residues long, while extended SDRS are approximately 350 residues. Sequence identity between different SDR enzymes are typically in the 15-30% range, but the enzymes share the Rossmann fold NAD-binding motif and characteristic NAD-binding and catalytic sequence patterns. These enzymes have a 3-glycine N-terminal NAD(P)(H)-binding pattern (typically, TGxxxGxG in classical SDRs and TGxxGxxG in extended SDRs), while substrate binding is in the C-terminal region. A critical catalytic Tyr residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase (15-PGDH) numbering), is often found in a conserved YXXXK pattern. In addition to the Tyr and Lys, there is often an upstream Ser (Ser-138, 15-PGDH numbering) and/or an Asn (Asn-107, 15-PGDH numbering) or additional Ser, contributing to the active site. Substrates for these enzymes include sugars, steroids, alcohols, and aromatic compounds. The standard reaction mechanism is a proton relay involving the conserved Tyr and Lys, as well as Asn (or Ser). Some SDR family members, including 17 beta-hydroxysteroid dehydrogenase contain an additional helix-turn-helix motif that is not generally found among SDRs. Length = 250

>gnl|CDD|187586 cd05325, carb_red_sniffer_like_SDR_c, carbonyl reductase sniffer-like, classical (c) SDRs

 Score = 85.4 bits (212), Expect = 4e-20
 Identities = 57/198 (28%), Positives = 89/198 (44%), Gaps = 16/198 (8%)

Query: 50  VIITGASSGIGEHLAYEYARRG-ACLALCARREKSLEEVADTAREIGSPDVITIRADVSK 108
           V+ITGAS GIG  L  +   RG   +    R   +  E+A          +  +  DV+ 
Sbjct: 1   VLITGASRGIGLELVRQLLARGNNTVIATCRDPSAATELAALGA--SHSRLHILELDVT- 57

Query: 109 VDDCRSLVEETMNHFG--RLDHLVNNAGISSVALFEDIVNITDFKQIMNINFWGSVYTTR 166
            D+     E      G   LD L+NNAGI         V+  D  ++  +N  G +  T+
Sbjct: 58  -DEIAESAEAVAERLGDAGLDVLINNAGILHSYGPASEVDSEDLLEVFQVNVLGPLLLTQ 116

Query: 167 FAVPHLRY-TKGKIVVLSSAASWLTA----PRMSFYNASKAALVLFFETLRVELGSDVGV 221
             +P L    + KI+ +SS    +         S Y ASKAAL +  ++L VEL  D G+
Sbjct: 117 AFLPLLLKGARAKIINISSRVGSIGDNTSGGWYS-YRASKAALNMLTKSLAVELKRD-GI 174

Query: 222 TIVT--PGFIESELTQGK 237
           T+V+  PG++ +++    
Sbjct: 175 TVVSLHPGWVRTDMGGPF 192

Sniffer is an NADPH-dependent carbonyl reductase of the classical SDR family. Studies in Drosophila melanogaster implicate Sniffer in the prevention of neurodegeneration due to aging and oxidative-stress. This subgroup also includes Rhodococcus sp. AD45 IsoH, which is an NAD-dependent 1-hydroxy-2-glutathionyl-2-methyl-3-butene dehydrogenase involved in isoprene metabolism, Aspergillus nidulans StcE encoded by a gene which is part of a proposed sterigmatocystin biosynthesis gene cluster, Bacillus circulans SANK 72073 BtrF encoded by a gene found in the butirosin biosynthesis gene cluster, and Aspergillus parasiticus nor-1 involved in the biosynthesis of aflatoxins. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold (alpha/beta folding pattern with a central beta-sheet), an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Classical SDRs are typically about 250 residues long, while extended SDRs are approximately 350 residues. Sequence identity between different SDR enzymes are typically in the 15-30% range, but the enzymes share the Rossmann fold NAD-binding motif and characteristic NAD-binding and catalytic sequence patterns. These enzymes catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase (15-PGDH) numbering). In addition to the Tyr and Lys, there is often an upstream Ser (Ser-138, 15-PGDH numbering) and/or an Asn (Asn-107, 15-PGDH numbering) contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. Extended SDRs have additional elements in the C-terminal region, and typically have a TGXXGXXG cofactor binding motif. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid synthase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type ketoacyl reductases have a TGXXXGX(1-2)G NAD(P)-binding motif. Some atypical SDRs have lost catalytic activity and/or have an unusual NAD(P)-binding motif and missing or unusual active site residues. Reactions catalyzed within the SDR family include isomerization, decarboxylation, epimerization, C=N bond reduction, dehydratase activity, dehalogenation, Enoyl-CoA reduction, and carbonyl-alcohol oxidoreduction. Length = 233

>gnl|CDD|236209 PRK08265, PRK08265, short chain dehydrogenase; Provisional

 Score = 85.8 bits (213), Expect = 4e-20
 Identities = 54/204 (26%), Positives = 89/204 (43%), Gaps = 23/204 (11%)

Query: 44  DVSGKVVIITGASSGIGEHLAYEYARRGACLALCARREKSLEEVADTAREIGSPDVITIR 103
            ++GKV I+TG ++ IG  +A      GA +A+      +   VA     +G      I 
Sbjct: 3   GLAGKVAIVTGGATLIGAAVARALVAAGARVAIVDIDADNGAAVAA---SLGE-RARFIA 58

Query: 104 ADVSKVDDCRSLVEETMNHFGRLDHLVNNA------GISSVALFEDIVNITDFKQIMNIN 157
            D++        V   +  FGR+D LVN A      G++S        +  D+   +++N
Sbjct: 59  TDITDDAAIERAVATVVARFGRVDILVNLACTYLDDGLAS--------SRADWLAALDVN 110

Query: 158 FWGSVYTTRFAVPHLRYTKGKIVVLSSAASWLTAPRMSFYNASKAALVLFFETLRVELGS 217
              +    + A PHL    G IV  +S ++         Y ASKAA+     ++ ++L  
Sbjct: 111 LVSAAMLAQAAHPHLARGGGAIVNFTSISAKFAQTGRWLYPASKAAIRQLTRSMAMDLAP 170

Query: 218 D-VGVTIVTPGFIES----ELTQG 236
           D + V  V+PG+  S    EL+ G
Sbjct: 171 DGIRVNSVSPGWTWSRVMDELSGG 194

Length = 261

>gnl|CDD|180822 PRK07069, PRK07069, short chain dehydrogenase; Validated

 Score = 85.5 bits (212), Expect = 5e-20
 Identities = 55/193 (28%), Positives = 92/193 (47%), Gaps = 7/193 (3%)

Query: 52  ITGASSGIGEHLAYEYARRGACLALC-ARREKSLEEVADTAREI-GSPDVITIRADVSKV 109
           ITGA+ G+G  +A   A +GA + L        L+  A       G         DV+  
Sbjct: 4   ITGAAGGLGRAIARRMAEQGAKVFLTDINDAAGLDAFAAEINAAHGEGVAFAAVQDVTDE 63

Query: 110 DDCRSLVEETMNHFGRLDHLVNNAGISSVALFEDIVNITDFKQIMNINFWGSVYTTRFAV 169
              ++L+ +  +  G L  LVNNAG+ S    E I  + +++++M IN        + A+
Sbjct: 64  AQWQALLAQAADAMGGLSVLVNNAGVGSFGAIEQI-ELDEWRRVMAINVESIFLGCKHAL 122

Query: 170 PHLRYTK-GKIVVLSSAASWLTAPRMSFYNASKAALVLFFETLRVEL---GSDVGVTIVT 225
           P+LR ++   IV +SS A++   P  + YNASKAA+    +++ ++    G DV    + 
Sbjct: 123 PYLRASQPASIVNISSVAAFKAEPDYTAYNASKAAVASLTKSIALDCARRGLDVRCNSIH 182

Query: 226 PGFIESELTQGKF 238
           P FI + +    F
Sbjct: 183 PTFIRTGIVDPIF 195

Length = 251

>gnl|CDD|187646 cd08942, RhlG_SDR_c, RhlG and related beta-ketoacyl reductases, classical (c) SDRs

 Score = 85.2 bits (211), Expect = 6e-20
 Identities = 58/199 (29%), Positives = 98/199 (49%), Gaps = 10/199 (5%)

Query: 44  DVSGKVVIITGASSGIGEHLAYEYARRGACLALCARREKSLEEVADTAREIGSPDVITIR 103
            V+GK+V++TG S GIG  +A  +   GA + + AR+ ++  + A+     G  + I I 
Sbjct: 3   SVAGKIVLVTGGSRGIGRMIAQGFLEAGARVIISARKAEACADAAEELSAYG--ECIAIP 60

Query: 104 ADVSKVDDCRSLVEETMNHFGRLDHLVNNAGISSVALFEDIVNITDFKQIMNINFWGSVY 163
           AD+S  +   +LV        RLD LVNNAG +  A  E     + + ++M+IN     +
Sbjct: 61  ADLSSEEGIEALVARVAERSDRLDVLVNNAGATWGAPLEAF-PESGWDKVMDINVKSVFF 119

Query: 164 TTRFAVPHLRYTK-----GKIVVLSSAASWLTAPRMSF-YNASKAALVLFFETLRVELGS 217
            T+  +P LR         +++ + S A  + +   ++ Y ASKAA+      L  EL  
Sbjct: 120 LTQALLPLLRAAATAENPARVINIGSIAGIVVSGLENYSYGASKAAVHQLTRKLAKELAG 179

Query: 218 D-VGVTIVTPGFIESELTQ 235
           + + V  + PG   S++T 
Sbjct: 180 EHITVNAIAPGRFPSKMTA 198

Pseudomonas aeruginosa RhlG is an SDR-family beta-ketoacyl reductase involved in Rhamnolipid biosynthesis. RhlG is similar to but distinct from the FabG family of beta-ketoacyl-acyl carrier protein (ACP) of type II fatty acid synthesis. RhlG and related proteins are classical SDRs, with a canonical active site tetrad and glycine-rich NAD(P)-binding motif. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold (alpha/beta folding pattern with a central beta-sheet), an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Classical SDRs are typically about 250 residues long, while extended SDRs are approximately 350 residues. Sequence identity between different SDR enzymes are typically in the 15-30% range, but the enzymes share the Rossmann fold NAD-binding motif and characteristic NAD-binding and catalytic sequence patterns. These enzymes catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase (15-PGDH) numbering). In addition to the Tyr and Lys, there is often an upstream Ser (Ser-138, 15-PGDH numbering) and/or an Asn (Asn-107, 15-PGDH numbering) contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. Extended SDRs have additional elements in the C-terminal region, and typically have a TGXXGXXG cofactor binding motif. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid synthase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type ketoacyl reductases have a TGXXXGX(1-2)G NAD(P)-binding motif. Some atypical SDRs have lost catalytic activity and/or have an unusual NAD(P)-binding motif and missing or unusual active site residues. Reactions catalyzed within the SDR family include isomerization, decarboxylation, epimerization, C=N bond reduction, dehydratase activity, dehalogenation, Enoyl-CoA reduction, and carbonyl-alcohol oxidoreduction. Length = 250

>gnl|CDD|180817 PRK07060, PRK07060, short chain dehydrogenase; Provisional

 Score = 84.8 bits (210), Expect = 9e-20
 Identities = 65/197 (32%), Positives = 90/197 (45%), Gaps = 18/197 (9%)

Query: 44  DVSGKVVIITGASSGIGEHLAYEYARRGACLALCARREKSLEEVADTAREIGSPDVITIR 103
           D SGK V++TGASSGIG   A   A+RGA +   AR   +L+ +A    E G      +R
Sbjct: 6   DFSGKSVLVTGASSGIGRACAVALAQRGARVVAAARNAAALDRLAG---ETGCE---PLR 59

Query: 104 ADVSKVDDCRSLVEETMNHFGRLDHLVNNAGISSVALFEDIVNITD--FKQIMNINFWGS 161
            DV       + +   +   G  D LVN AGI   A  E  +++T   F ++M +N  G+
Sbjct: 60  LDVG----DDAAIRAALAAAGAFDGLVNCAGI---ASLESALDMTAEGFDRVMAVNARGA 112

Query: 162 VYTTRFAVPHL--RYTKGKIVVLSSAASWLTAPRMSFYNASKAALVLFFETLRVELGS-D 218
               R     +      G IV +SS A+ +  P    Y ASKAAL      L VELG   
Sbjct: 113 ALVARHVARAMIAAGRGGSIVNVSSQAALVGLPDHLAYCASKAALDAITRVLCVELGPHG 172

Query: 219 VGVTIVTPGFIESELTQ 235
           + V  V P    + +  
Sbjct: 173 IRVNSVNPTVTLTPMAA 189

Length = 245

>gnl|CDD|135637 PRK05876, PRK05876, short chain dehydrogenase; Provisional

 Score = 85.4 bits (211), Expect = 9e-20
 Identities = 55/190 (28%), Positives = 97/190 (51%), Gaps = 5/190 (2%)

Query: 47  GKVVIITGASSGIGEHLAYEYARRGACLALCARREKSLEEVADTAREIGSPDVITIRADV 106
           G+  +ITG +SGIG     E+ARRGA + L    +  L +  +  R  G  DV  +  DV
Sbjct: 6   GRGAVITGGASGIGLATGTEFARRGARVVLGDVDKPGLRQAVNHLRAEGF-DVHGVMCDV 64

Query: 107 SKVDDCRSLVEETMNHFGRLDHLVNNAGISSVALFEDIVNITDFKQIMNINFWGSVYTTR 166
              ++   L +E     G +D + +NAGI       ++    D++ +++++ WGS++T  
Sbjct: 65  RHREEVTHLADEAFRLLGHVDVVFSNAGIVVGGPIVEM-THDDWRWVIDVDLWGSIHTVE 123

Query: 167 FAVPHL--RYTKGKIVVLSSAASWLTAPRMSFYNASKAALVLFFETLRVELGSD-VGVTI 223
             +P L  + T G +V  +S A  +    +  Y  +K  +V   ETL  E+ +D +GV++
Sbjct: 124 AFLPRLLEQGTGGHVVFTASFAGLVPNAGLGAYGVAKYGVVGLAETLAREVTADGIGVSV 183

Query: 224 VTPGFIESEL 233
           + P  +E+ L
Sbjct: 184 LCPMVVETNL 193

Length = 275

>gnl|CDD|187664 cd09763, DHRS1-like_SDR_c, human dehydrogenase/reductase (SDR family) member 1 (DHRS1) -like, classical (c) SDRs

 Score = 85.2 bits (211), Expect = 1e-19
 Identities = 61/201 (30%), Positives = 87/201 (43%), Gaps = 18/201 (8%)

Query: 46  SGKVVIITGASSGIGEHLAYEYARRGACLALCAR-REKSLEEVADTAREIGSPDVITIRA 104
           SGK+ ++TGAS GIG  +A +    GA + +  R     L   A+     G    I +R 
Sbjct: 2   SGKIALVTGASRGIGRGIALQLGEAGATVYITGRTILPQLPGTAEEIEARGG-KCIPVRC 60

Query: 105 DVSKVDDCRSLVEETMNHF-GRLDHLVNNA--------GISSVALFEDIVNITDFKQIMN 155
           D S  D+  +L E       GRLD LVNNA           +   +E+   I D   I N
Sbjct: 61  DHSDDDEVEALFERVAREQQGRLDILVNNAYAAVQLILVGVAKPFWEEPPTIWD--DINN 118

Query: 156 INFWGSVYTTRFAVPHLR-YTKGKIVVLSSAASWLTAPRMSFYNASKAALVLFFETLRVE 214
           +        + +A P +    KG IV++SS    L       Y   KAA+      +  E
Sbjct: 119 VGLRAHYACSVYAAPLMVKAGKGLIVIISSTG-GLEYLFNVAYGVGKAAIDRMAADMAHE 177

Query: 215 LGSDVGVTIVT--PGFIESEL 233
           L    GV +V+  PGF+ +EL
Sbjct: 178 LKPH-GVAVVSLWPGFVRTEL 197

This subgroup includes human DHRS1 and related proteins. These are members of the classical SDR family, with a canonical Gly-rich NAD-binding motif and the typical YXXXK active site motif. However, the rest of the catalytic tetrad is not strongly conserved. DHRS1 mRNA has been detected in many tissues, liver, heart, skeletal muscle, kidney and pancreas; a longer transcript is predominantly expressed in the liver , a shorter one in the heart. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold (alpha/beta folding pattern with a central beta-sheet), an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Classical SDRs are typically about 250 residues long, while extended SDRS are approximately 350 residues. Sequence identity between different SDR enzymes are typically in the 15-30% range, but the enzymes share the Rossmann fold NAD-binding motif and characteristic NAD-binding and catalytic sequence patterns. These enzymes have a 3-glycine N-terminal NAD(P)(H)-binding pattern (typically, TGxxxGxG in classical SDRs and TGxxGxxG in extended SDRs), while substrate binding is in the C-terminal region. A critical catalytic Tyr residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase (15-PGDH) numbering), is often found in a conserved YXXXK pattern. In addition to the Tyr and Lys, there is often an upstream Ser (Ser-138, 15-PGDH numbering) and/or an Asn (Asn-107, 15-PGDH numbering) or additional Ser, contributing to the active site. Substrates for these enzymes include sugars, steroids, alcohols, and aromatic compounds. The standard reaction mechanism is a proton relay involving the conserved Tyr and Lys, as well as Asn (or Ser). Some SDR family members, including 17 beta-hydroxysteroid dehydrogenase contain an additional helix-turn-helix motif that is not generally found among SDRs. Length = 265

>gnl|CDD|181668 PRK09135, PRK09135, pteridine reductase; Provisional

 Score = 84.6 bits (210), Expect = 1e-19
 Identities = 58/190 (30%), Positives = 84/190 (44%), Gaps = 12/190 (6%)

Query: 46  SGKVVIITGASSGIGEHLAYEYARRGACLALCARREKSLEEVADTAREIGS--PD-VITI 102
           S KV +ITG +  IG  +A      G  +A+   R  S  E    A E+ +  P     +
Sbjct: 5   SAKVALITGGARRIGAAIARTLHAAGYRVAIHYHR--SAAEADALAAELNALRPGSAAAL 62

Query: 103 RADVSKVDDCRSLVEETMNHFGRLDHLVNNAGISS---VALFEDIVNITDFKQIMNINFW 159
           +AD+   D    LV   +  FGRLD LVNNA  SS     L    +    +  +   N  
Sbjct: 63  QADLLDPDALPELVAACVAAFGRLDALVNNA--SSFYPTPLGS--ITEAQWDDLFASNLK 118

Query: 160 GSVYTTRFAVPHLRYTKGKIVVLSSAASWLTAPRMSFYNASKAALVLFFETLRVELGSDV 219
              + ++ A P LR  +G IV ++   +         Y A+KAAL +   +L +EL  +V
Sbjct: 119 APFFLSQAAAPQLRKQRGAIVNITDIHAERPLKGYPVYCAAKAALEMLTRSLALELAPEV 178

Query: 220 GVTIVTPGFI 229
            V  V PG I
Sbjct: 179 RVNAVAPGAI 188

Length = 249

>gnl|CDD|237187 PRK12743, PRK12743, oxidoreductase; Provisional

 Score = 84.3 bits (209), Expect = 1e-19
 Identities = 50/192 (26%), Positives = 94/192 (48%), Gaps = 6/192 (3%)

Query: 48  KVVIITGASSGIGEHLAYEYARRGACLALCARR-EKSLEEVADTAREIGSPDVITIRADV 106
           +V I+T + SGIG+  A   A++G  + +     E+  +E A+  R  G       + D+
Sbjct: 3   QVAIVTASDSGIGKACALLLAQQGFDIGITWHSDEEGAKETAEEVRSHGV-RAEIRQLDL 61

Query: 107 SKVDDCRSLVEETMNHFGRLDHLVNNAGISSVALFEDIVNITDFKQIMNINFWGSVYTTR 166
           S + +    +++ +   GR+D LVNNAG  + A F D ++  ++++I  ++  G+   ++
Sbjct: 62  SDLPEGAQALDKLIQRLGRIDVLVNNAGAMTKAPFLD-MDFDEWRKIFTVDVDGAFLCSQ 120

Query: 167 FAVPHLRY--TKGKIVVLSSAASWLTAPRMSFYNASKAALVLFFETLRVELGS-DVGVTI 223
            A  H+      G+I+ ++S       P  S Y A+K AL    + + +EL    + V  
Sbjct: 121 IAARHMVKQGQGGRIINITSVHEHTPLPGASAYTAAKHALGGLTKAMALELVEHGILVNA 180

Query: 224 VTPGFIESELTQ 235
           V PG I + +  
Sbjct: 181 VAPGAIATPMNG 192

Length = 256

>gnl|CDD|168186 PRK05693, PRK05693, short chain dehydrogenase; Provisional

 Score = 84.1 bits (208), Expect = 3e-19
 Identities = 60/189 (31%), Positives = 86/189 (45%), Gaps = 9/189 (4%)

Query: 48  KVVIITGASSGIGEHLAYEYARRGACLALCARREKSLEEVADTAREIGSPDVITIRADVS 107
            VV+ITG SSGIG  LA  +   G  +   AR+ + +E +A             ++ DV+
Sbjct: 2   PVVLITGCSSGIGRALADAFKAAGYEVWATARKAEDVEALAAAG-------FTAVQLDVN 54

Query: 108 KVDDCRSLVEETMNHFGRLDHLVNNAGISSVALFEDIVNITDFKQIMNINFWGSVYTTRF 167
                  L EE     G LD L+NNAG  ++    D   +   ++    N +  V  TR 
Sbjct: 55  DGAALARLAEELEAEHGGLDVLINNAGYGAMGPLLDG-GVEAMRRQFETNVFAVVGVTRA 113

Query: 168 AVPHLRYTKGKIVVLSSAASWLTAPRMSFYNASKAALVLFFETLRVELGS-DVGVTIVTP 226
             P LR ++G +V + S +  L  P    Y ASKAA+    + LR+EL    V V  V P
Sbjct: 114 LFPLLRRSRGLVVNIGSVSGVLVTPFAGAYCASKAAVHALSDALRLELAPFGVQVMEVQP 173

Query: 227 GFIESELTQ 235
           G I S+   
Sbjct: 174 GAIASQFAS 182

Length = 274

>gnl|CDD|135765 PRK06113, PRK06113, 7-alpha-hydroxysteroid dehydrogenase; Validated

 Score = 83.7 bits (207), Expect = 3e-19
 Identities = 49/188 (26%), Positives = 92/188 (48%), Gaps = 5/188 (2%)

Query: 47  GKVVIITGASSGIGEHLAYEYARRGACLALCARREKSLEEVADTAREIGSPDVITIRADV 106
           GK  IITGA +GIG+ +A  +A  GA + +      +   V D  +++G       R D+
Sbjct: 11  GKCAIITGAGAGIGKEIAITFATAGASVVVSDINADAANHVVDEIQQLGG-QAFACRCDI 69

Query: 107 SKVDDCRSLVEETMNHFGRLDHLVNNAGISSVALFEDIVNITDFKQIMNINFWGSVYTTR 166
           +   +  +L +  ++  G++D LVNNAG      F+  + + DF++   +N +   + ++
Sbjct: 70  TSEQELSALADFALSKLGKVDILVNNAGGGGPKPFD--MPMADFRRAYELNVFSFFHLSQ 127

Query: 167 FAVPHLRYT-KGKIVVLSSAASWLTAPRMSFYNASKAALVLFFETLRVELGS-DVGVTIV 224
              P +     G I+ ++S A+      M+ Y +SKAA       +  +LG  ++ V  +
Sbjct: 128 LVAPEMEKNGGGVILTITSMAAENKNINMTSYASSKAAASHLVRNMAFDLGEKNIRVNGI 187

Query: 225 TPGFIESE 232
            PG I ++
Sbjct: 188 APGAILTD 195

Length = 255

>gnl|CDD|187640 cd08935, mannonate_red_SDR_c, putative D-mannonate oxidoreductase, classical (c) SDR

 Score = 83.7 bits (207), Expect = 3e-19
 Identities = 54/206 (26%), Positives = 90/206 (43%), Gaps = 16/206 (7%)

Query: 43  EDVSGKVVIITGASSGIGEHLAYEYARRGACLALCARREKSLEEVADTAREIGSPDVITI 102
             +  KV +ITG +  +G  +A   A+ GA +A   R ++  ++VA     +G    I +
Sbjct: 1   FSLKNKVAVITGGTGVLGGAMARALAQAGAKVAALGRNQEKGDKVAKEITALGG-RAIAL 59

Query: 103 RADVSKVDDCRSLVEETMNHFGRLDHLVNNAG--------ISSVALFEDIVNITD----- 149
            ADV          EE +  FG +D L+N AG               E   N  D     
Sbjct: 60  AADVLDRASLERAREEIVAQFGTVDILINGAGGNHPDATTDPEHYEPETEQNFFDLDEEG 119

Query: 150 FKQIMNINFWGSVYTTR-FAVPHLRYTKGKIVVLSSAASWLTAPRMSFYNASKAALVLFF 208
           ++ + ++N  GS   ++ F    L    G I+ +SS  ++    ++  Y+A+KAA+  F 
Sbjct: 120 WEFVFDLNLNGSFLPSQVFGKDMLEQKGGSIINISSMNAFSPLTKVPAYSAAKAAVSNFT 179

Query: 209 ETLRVEL-GSDVGVTIVTPGFIESEL 233
           + L VE   + V V  + PGF  +  
Sbjct: 180 QWLAVEFATTGVRVNAIAPGFFVTPQ 205

D-mannonate oxidoreductase catalyzes the NAD-dependent interconversion of D-mannonate and D-fructuronate. This subgroup includes Bacillus subtitils UxuB/YjmF, a putative D-mannonate oxidoreductase; the B. subtilis UxuB gene is part of a putative ten-gene operon (the Yjm operon) involved in hexuronate catabolism. Escherichia coli UxuB does not belong to this subgroup. This subgroup has a canonical active site tetrad and a typical Gly-rich NAD-binding motif. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold (alpha/beta folding pattern with a central beta-sheet), an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Classical SDRs are typically about 250 residues long, while extended SDRs are approximately 350 residues. Sequence identity between different SDR enzymes are typically in the 15-30% range, but the enzymes share the Rossmann fold NAD-binding motif and characteristic NAD-binding and catalytic sequence patterns. These enzymes catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase (15-PGDH) numbering). In addition to the Tyr and Lys, there is often an upstream Ser (Ser-138, 15-PGDH numbering) and/or an Asn (Asn-107, 15-PGDH numbering) contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. Extended SDRs have additional elements in the C-terminal region, and typically have a TGXXGXXG cofactor binding motif. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid synthase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type ketoacyl reductases have a TGXXXGX(1-2)G NAD(P)-binding motif. Some atypical SDRs have lost catalytic activity and/or have an unusual NAD(P)-binding motif and missing or unusual active site residues. Reactions catalyzed within the SDR family include isomerization, decarboxylation, epimerization, C=N bond reduction, dehydratase activity, dehalogenation, Enoyl-CoA reduction, and carbonyl-alcohol oxidoreduction. Length = 271

>gnl|CDD|180411 PRK06123, PRK06123, short chain dehydrogenase; Provisional

 Score = 83.3 bits (206), Expect = 4e-19
 Identities = 69/199 (34%), Positives = 93/199 (46%), Gaps = 20/199 (10%)

Query: 48  KVVIITGASSGIGEHLAYEYARRGACLALCA---RREKSLEEVADTAREIGSPDVITIRA 104
           KV+IITGAS GIG   A   A RG   A+C    R   + E V    R  G  + + + A
Sbjct: 3   KVMIITGASRGIGAATALLAAERG--YAVCLNYLRNRDAAEAVVQAIRRQGG-EALAVAA 59

Query: 105 DVSKVDDCRSLVEETMNHFGRLDHLVNNAGISSVALFEDIVNITDFKQIMNINFWGSVYT 164
           DV+   D   L E      GRLD LVNNAGI    +  + ++     +I   N  GS   
Sbjct: 60  DVADEADVLRLFEAVDRELGRLDALVNNAGILEAQMRLEQMDAARLTRIFATNVVGSFLC 119

Query: 165 TRFAVPHL--RY--TKGKIVVLSSAASWLTAPRMSF-YNASKAALVLFFETLRVELGSDV 219
            R AV  +  R+    G IV +SS A+ L +P     Y ASK A+    +T+ + L  +V
Sbjct: 120 AREAVKRMSTRHGGRGGAIVNVSSMAARLGSPGEYIDYAASKGAI----DTMTIGLAKEV 175

Query: 220 G-----VTIVTPGFIESEL 233
                 V  V PG I +E+
Sbjct: 176 AAEGIRVNAVRPGVIYTEI 194

Length = 248

>gnl|CDD|235608 PRK05786, fabG, 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional

 Score = 82.5 bits (204), Expect = 5e-19
 Identities = 52/201 (25%), Positives = 88/201 (43%), Gaps = 17/201 (8%)

Query: 47  GKVVIITGASSGIGEHLAYEYARRGACLALCARREKSLEEVADTAREIGSPDVITIRADV 106
           GK V I G S G+G  +AY   + GA + + +R E  L+ +  T  + G+  +  +  DV
Sbjct: 5   GKKVAIIGVSEGLGYAVAYFALKEGAQVCINSRNENKLKRMKKTLSKYGN--IHYVVGDV 62

Query: 107 SKVDDCRSLVEETMNHFGRLDHLVNNAGISSVALFEDIV-NITDFKQIMNINFWGSVYTT 165
           S  +  R+++E+       +D LV   G       ED V   +  ++++  +    +Y  
Sbjct: 63  SSTESARNVIEKAAKVLNAIDGLVVTVG----GYVEDTVEEFSGLEEMLTNHIKIPLYAV 118

Query: 166 RFAVPHLRYTKGKIVVLSSAASWL--TAPRMSFYNASKAALVLFFETLRVE-LGSDVGVT 222
             ++  L+  +G  +VL S+ S +   +P    Y  +KA L    E L  E LG  + V 
Sbjct: 119 NASLRFLK--EGSSIVLVSSMSGIYKASPDQLSYAVAKAGLAKAVEILASELLGRGIRVN 176

Query: 223 IVTPGFIESELTQGKFLTGRR 243
            + P  I      G F   R 
Sbjct: 177 GIAPTTIS-----GDFEPERN 192

Length = 238

>gnl|CDD|177895 PLN02253, PLN02253, xanthoxin dehydrogenase

 Score = 82.9 bits (205), Expect = 7e-19
 Identities = 61/199 (30%), Positives = 103/199 (51%), Gaps = 13/199 (6%)

Query: 35  SVFNSIFSEDVSGKVVIITGASSGIGEHLAYEYARRGACLALCARREKSLEEVADTAREI 94
           S  +S+ S+ + GKV ++TG ++GIGE +   + + GA + +   ++   + V D+    
Sbjct: 6   SSASSLPSQRLLGKVALVTGGATGIGESIVRLFHKHGAKVCIVDLQDDLGQNVCDSLG-- 63

Query: 95  GSPDVITIRADVSKVDDCRSLVEETMNHFGRLDHLVNNAGISSVALFEDIVNI--TDFKQ 152
           G P+V     DV+  DD    V+ T++ FG LD +VNNAG++      DI N+  ++F++
Sbjct: 64  GEPNVCFFHCDVTVEDDVSRAVDFTVDKFGTLDIMVNNAGLTG-PPCPDIRNVELSEFEK 122

Query: 153 IMNIN----FWGSVYTTRFAVPHLRYTKGKIVVLSSAASWLTAPRMSFYNASKAALVLFF 208
           + ++N    F G  +  R  +P     KG IV L S AS +       Y  SK A++   
Sbjct: 123 VFDVNVKGVFLGMKHAARIMIPL---KKGSIVSLCSVASAIGGLGPHAYTGSKHAVLGLT 179

Query: 209 ETLRVELGSD-VGVTIVTP 226
            ++  ELG   + V  V+P
Sbjct: 180 RSVAAELGKHGIRVNCVSP 198

Length = 280

>gnl|CDD|180408 PRK06114, PRK06114, short chain dehydrogenase; Provisional

 Score = 82.5 bits (204), Expect = 7e-19
 Identities = 60/190 (31%), Positives = 96/190 (50%), Gaps = 7/190 (3%)

Query: 44  DVSGKVVIITGASSGIGEHLAYEYARRGACLALCARREK-SLEEVADTAREIGSPDVITI 102
           D+ G+V  +TGA SGIG+ +A   A+ GA +AL   R    L E A+     G    I I
Sbjct: 5   DLDGQVAFVTGAGSGIGQRIAIGLAQAGADVALFDLRTDDGLAETAEHIEAAGR-RAIQI 63

Query: 103 RADVSKVDDCRSLVEETMNHFGRLDHLVNNAGISSVALFEDIVNITDFKQIMNINFWGSV 162
            ADV+   D R+ V  T    G L   VN AGI++    E++     ++ +M+IN  G  
Sbjct: 64  AADVTSKADLRAAVARTEAELGALTLAVNAAGIANANPAEEM-EEEQWQTVMDINLTGVF 122

Query: 163 YTTRF-AVPHLRYTKGKIVVLSSAASWLTAPRM--SFYNASKAALVLFFETLRVE-LGSD 218
            + +  A   L    G IV ++S +  +    +  + YNASKA ++   ++L +E +G  
Sbjct: 123 LSCQAEARAMLENGGGSIVNIASMSGIIVNRGLLQAHYNASKAGVIHLSKSLAMEWVGRG 182

Query: 219 VGVTIVTPGF 228
           + V  ++PG+
Sbjct: 183 IRVNSISPGY 192

Length = 254

>gnl|CDD|187621 cd05363, SDH_SDR_c, Sorbitol dehydrogenase (SDH), classical (c) SDR

 Score = 82.7 bits (204), Expect = 7e-19
 Identities = 59/197 (29%), Positives = 96/197 (48%), Gaps = 16/197 (8%)

Query: 47  GKVVIITGASSGIGEHLAYEYARRGACLALCARREKSLEEVADTAREIGSPDVITIRADV 106
           GK  +ITG++ GIG   A  Y R GA +A+    + +LE    TA EIG P    I  DV
Sbjct: 3   GKTALITGSARGIGRAFAQAYVREGARVAIA---DINLEAARATAAEIG-PAACAISLDV 58

Query: 107 SKVDDCRSLVEETMNHFGRLDHLVNNAGISSVALFE--DIVNIT--DFKQIMNINFWGSV 162
           +        V   ++ +G +D LVNNA     ALF+   IV+IT   + ++  IN  G++
Sbjct: 59  TDQASIDRCVAALVDRWGSIDILVNNA-----ALFDLAPIVDITRESYDRLFAINVSGTL 113

Query: 163 YTTRFAVPHL--RYTKGKIVVLSSAASWLTAPRMSFYNASKAALVLFFETLRVELGS-DV 219
           +  +     +  +   GKI+ ++S A       +  Y A+KAA++   ++  + L    +
Sbjct: 114 FMMQAVARAMIAQGRGGKIINMASQAGRRGEALVGVYCATKAAVISLTQSAGLNLIRHGI 173

Query: 220 GVTIVTPGFIESELTQG 236
            V  + PG ++ E   G
Sbjct: 174 NVNAIAPGVVDGEHWDG 190

This bacterial subgroup includes Rhodobacter sphaeroides SDH, and other SDHs. SDH preferentially interconverts D-sorbitol (D-glucitol) and D-fructose, but also interconverts L-iditol/L-sorbose and galactitol/D-tagatose. SDH is NAD-dependent and is a dimeric member of the SDR family. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold (alpha/beta folding pattern with a central beta-sheet), an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Classical SDRs are typically about 250 residues long, while extended SDRS are approximately 350 residues. Sequence identity between different SDR enzymes are typically in the 15-30% range, but the enzymes share the Rossmann fold NAD-binding motif and characteristic NAD-binding and catalytic sequence patterns. These enzymes have a 3-glycine N-terminal NAD(P)(H)-binding pattern (typically, TGxxxGxG in classical SDRs and TGxxGxxG in extended SDRs), while substrate binding is in the C-terminal region. A critical catalytic Tyr residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase (15-PGDH) numbering), is often found in a conserved YXXXK pattern. In addition to the Tyr and Lys, there is often an upstream Ser (Ser-138, 15-PGDH numbering) and/or an Asn (Asn-107, 15-PGDH numbering) or additional Ser, contributing to the active site. Substrates for these enzymes include sugars, steroids, alcohols, and aromatic compounds. The standard reaction mechanism is a proton relay involving the conserved Tyr and Lys, as well as Asn (or Ser). Some SDR family members, including 17 beta-hydroxysteroid dehydrogenase contain an additional helix-turn-helix motif that is not generally found among SDRs. Length = 254

>gnl|CDD|132368 TIGR03325, BphB_TodD, cis-2,3-dihydrobiphenyl-2,3-diol dehydrogenase

 Score = 82.5 bits (204), Expect = 8e-19
 Identities = 58/197 (29%), Positives = 96/197 (48%), Gaps = 16/197 (8%)

Query: 45  VSGKVVIITGASSGIGEHLAYEYARRGACLALCARREKSLEEVADTAREIGSPDVITIRA 104
           + G+VV++TG +SG+G  +   +   GA +A+  +    L+E+           V+ +  
Sbjct: 3   LKGEVVLVTGGASGLGRAIVDRFVAEGARVAVLDKSAAGLQEL----EAAHGDAVVGVEG 58

Query: 105 DVSKVDDCRSLVEETMNHFGRLDHLVNNAGI--SSVALFEDIVNITD------FKQIMNI 156
           DV  +DD +  V   +  FG++D L+ NAGI   S AL    V+I D      F ++ +I
Sbjct: 59  DVRSLDDHKEAVARCVAAFGKIDCLIPNAGIWDYSTAL----VDIPDDRIDEAFDEVFHI 114

Query: 157 NFWGSVYTTRFAVPHLRYTKGKIVVLSSAASWLTAPRMSFYNASKAALVLFFETLRVELG 216
           N  G +   + A+P L  ++G ++   S A +        Y A+K A+V   + L  EL 
Sbjct: 115 NVKGYLLAVKAALPALVASRGSVIFTISNAGFYPNGGGPLYTAAKHAVVGLVKELAFELA 174

Query: 217 SDVGVTIVTPGFIESEL 233
             V V  V PG + S+L
Sbjct: 175 PYVRVNGVAPGGMSSDL 191

Members of this family occur as the BphD protein of biphenyl catabolism and as the TodD protein of toluene catabolism. Members catalyze the second step in each pathway and proved interchangeable when tested; the first and fourth enzymes in each pathway confer metabolic specificity. In the context of biphenyl degradation, the enzyme acts as cis-2,3-dihydrobiphenyl-2,3-diol dehydrogenase (EC 1.3.1.56), while in toluene degradation it acts as cis-toluene dihydrodiol dehydrogenase. Length = 262

>gnl|CDD|187609 cd05351, XR_like_SDR_c, xylulose reductase-like, classical (c) SDRs

 Score = 82.1 bits (203), Expect = 9e-19
 Identities = 51/186 (27%), Positives = 87/186 (46%), Gaps = 13/186 (6%)

Query: 44  DVSGKVVIITGASSGIGEHLAYEYARRGACLALCARREKSLEEVADTAREIGSPDVITIR 103
           D +GK  ++TGA  GIG       A+ GA +   +R +  L+ +    RE   P +  + 
Sbjct: 4   DFAGKRALVTGAGKGIGRATVKALAKAGARVVAVSRTQADLDSL---VRE--CPGIEPVC 58

Query: 104 ADVSKVDDCRSLVEETMNHFGRLDHLVNNAGISSVALFEDIVNITDFKQIMNINFWGSVY 163
            D+S  D      EE +   G +D LVNNA ++ +  F ++     F +  ++N    ++
Sbjct: 59  VDLSDWDA----TEEALGSVGPVDLLVNNAAVAILQPFLEVTK-EAFDRSFDVNVRAVIH 113

Query: 164 TTRFAVPHL--RYTKGKIVVLSSAASWLTAPRMSFYNASKAALVLFFETLRVELGS-DVG 220
            ++     +  R   G IV +SS AS       + Y ++KAAL +  + + +ELG   + 
Sbjct: 114 VSQIVARGMIARGVPGSIVNVSSQASQRALTNHTVYCSTKAALDMLTKVMALELGPHKIR 173

Query: 221 VTIVTP 226
           V  V P
Sbjct: 174 VNSVNP 179

Members of this subgroup include proteins identified as L-xylulose reductase (XR) and carbonyl reductase; they are members of the SDR family. XR, catalyzes the NADP-dependent reduction of L-xyulose and other sugars. Tetrameric mouse carbonyl reductase is involved in the metabolism of biogenic and xenobiotic carbonyl compounds. This subgroup also includes tetrameric chicken liver D-erythrulose reductase, which catalyzes the reduction of D-erythrulose to D-threitol. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold (alpha/beta folding pattern with a central beta-sheet), an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Classical SDRs are typically about 250 residues long, while extended SDRS are approximately 350 residues. Sequence identity between different SDR enzymes are typically in the 15-30% range, but the enzymes share the Rossmann fold NAD-binding motif and characteristic NAD-binding and catalytic sequence patterns. These enzymes have a 3-glycine N-terminal NAD(P)(H)-binding pattern (typically, TGxxxGxG in classical SDRs and TGxxGxxG in extended SDRs), while substrate binding is in the C-terminal region. A critical catalytic Tyr residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase (15-PGDH) numbering), is often found in a conserved YXXXK pattern. In addition to the Tyr and Lys, there is often an upstream Ser (Ser-138, 15-PGDH numbering) and/or an Asn (Asn-107, 15-PGDH numbering) or additional Ser, contributing to the active site. Substrates for these enzymes include sugars, steroids, alcohols, and aromatic compounds. The standard reaction mechanism is a proton relay involving the conserved Tyr and Lys, as well as Asn (or Ser). Length = 244

>gnl|CDD|187629 cd05371, HSD10-like_SDR_c, 17hydroxysteroid dehydrogenase type 10 (HSD10)-like, classical (c) SDRs

 Score = 81.6 bits (202), Expect = 1e-18
 Identities = 51/206 (24%), Positives = 90/206 (43%), Gaps = 24/206 (11%)

Query: 47  GKVVIITGASSGIGEHLAYEYARRGACLALCARREKSLEEVADTAREIGSPDVITIRADV 106
           G V ++TG +SG+G         +GA + +        E VA         +   +  DV
Sbjct: 2   GLVAVVTGGASGLGLATVERLLAQGAKVVILDLPNSPGETVAK-----LGDNCRFVPVDV 56

Query: 107 SKVDDCRSLVEETMNHFGRLDHLVNNAGISSVALF-----EDIVNITDFKQIMNINFWGS 161
           +   D ++ +      FGRLD +VN AGI+  A       +   ++  F++++N+N  G+
Sbjct: 57  TSEKDVKAALALAKAKFGRLDIVVNCAGIAVAAKTYNKKGQQPHSLELFQRVINVNLIGT 116

Query: 162 VYTTRFAVPHLRYT-------KGKIVVLSSAASWLTAPRMSFYNASKAALVLFFETLRV- 213
               R A   +          +G I+  +S A++      + Y+ASK  +V    TL + 
Sbjct: 117 FNVIRLAAGAMGKNEPDQGGERGVIINTASVAAFEGQIGQAAYSASKGGIVGM--TLPIA 174

Query: 214 -ELGSDVGVTIVT--PGFIESELTQG 236
            +L    G+ +VT  PG  ++ L  G
Sbjct: 175 RDLAPQ-GIRVVTIAPGLFDTPLLAG 199

HSD10, also known as amyloid-peptide-binding alcohol dehydrogenase (ABAD), was previously identified as a L-3-hydroxyacyl-CoA dehydrogenase, HADH2. In fatty acid metabolism, HADH2 catalyzes the third step of beta-oxidation, the conversion of a hydroxyl to a keto group in the NAD-dependent oxidation of L-3-hydroxyacyl CoA. In addition to alcohol dehydrogenase and HADH2 activites, HSD10 has steroid dehydrogenase activity. Although the mechanism is unclear, HSD10 is implicated in the formation of amyloid beta-petide in the brain (which is linked to the development of Alzheimer's disease). Although HSD10 is normally concentrated in the mitochondria, in the presence of amyloid beta-peptide it translocates into the plasma membrane, where it's action may generate cytotoxic aldehydes and may lower estrogen levels through its use of 17-beta-estradiol as a substrate. HSD10 is a member of the SRD family, but differs from other SDRs by the presence of two insertions of unknown function. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold (alpha/beta folding pattern with a central beta-sheet), an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Classical SDRs are typically about 250 residues long, while extended SDRs are approximately 350 residues. Sequence identity between different SDR enzymes are typically in the 15-30% range, but the enzymes share the Rossmann fold NAD-binding motif and characteristic NAD-binding and catalytic sequence patterns. These enzymes catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase (15-PGDH) numbering). In addition to the Tyr and Lys, there is often an upstream Ser (Ser-138, 15-PGDH numbering) and/or an Asn (Asn-107, 15-PGDH numbering) contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. Extended SDRs have additional elements in the C-terminal region, and typically have a TGXXGXXG cofactor binding motif. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid synthase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type ketoacyl reductases have a TGXXXGX(1-2)G NAD(P)-binding motif. Some atypical SDRs have lost catalytic activity and/or have an unusual NAD(P)-binding motif and missing or unusual active site residues. Reactions catalyzed within the SDR family include isomerization, decarboxylation, epimerization, C=N bond reduction, dehydratase activity, dehalogenation, Enoyl-CoA reduction, and carbonyl-alcohol oxidoreduction. Length = 252

>gnl|CDD|187642 cd08937, DHB_DH-like_SDR_c, 1,6-dihydroxycyclohexa-2,4-diene-1-carboxylate dehydrogenase (DHB DH)-like, classical (c) SDR

 Score = 81.4 bits (201), Expect = 2e-18
 Identities = 54/191 (28%), Positives = 85/191 (44%), Gaps = 10/191 (5%)

Query: 46  SGKVVIITGASSGIGEHLAYEYARRGACLALCARREKSLEEVADTAREIGSPDVITIRAD 105
            GKVV++TGA+ GIG  +A   A  GA + L  R E  + EV       G        AD
Sbjct: 3   EGKVVVVTGAAQGIGRGVAERLAGEGARVLLVDRSE-LVHEVLAEILAAGD-AAHVHTAD 60

Query: 106 VSKVDDCRSLVEETMNHFGRLDHLVNNAGISSVALFEDIVNITDFKQIMNINFWGSVYTT 165
           +      + +V   +  FGR+D L+NN G +  A   +       +  +  + + +++  
Sbjct: 61  LETYAGAQGVVRAAVERFGRVDVLINNVGGTIWAKPYEHYEEEQIEAEIRRSLFPTLWCC 120

Query: 166 RFAVPH-LRYTKGKIVVLSSAAS--WLTAPRMSFYNASKAALVLFFETLRVELGSD-VGV 221
           R  +PH L   +G IV +SS A+      P    Y+A+K  +     +L  E   D + V
Sbjct: 121 RAVLPHMLERQQGVIVNVSSIATRGIYRIP----YSAAKGGVNALTASLAFEHARDGIRV 176

Query: 222 TIVTPGFIESE 232
             V PG  E+ 
Sbjct: 177 NAVAPGGTEAP 187

DHB DH (aka 1,2-dihydroxycyclohexa-3,5-diene-1-carboxylate dehydrogenase) catalyzes the NAD-dependent conversion of 1,2-dihydroxycyclohexa-3,4-diene carboxylate to a catechol. This subgroup also contains Pseudomonas putida F1 CmtB, 2,3-dihydroxy-2,3-dihydro-p-cumate dehydrogenase, the second enzyme in the pathway for catabolism of p-cumate catabolism. This subgroup shares the glycine-rich NAD-binding motif of the classical SDRs and shares the same catalytic triad; however, the upstream Asn implicated in cofactor binding or catalysis in other SDRs is generally substituted by a Ser. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold (alpha/beta folding pattern with a central beta-sheet), an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Classical SDRs are typically about 250 residues long, while extended SDRs are approximately 350 residues. Sequence identity between different SDR enzymes are typically in the 15-30% range, but the enzymes share the Rossmann fold NAD-binding motif and characteristic NAD-binding and catalytic sequence patterns. These enzymes catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase (15-PGDH) numbering). In addition to the Tyr and Lys, there is often an upstream Ser (Ser-138, 15-PGDH numbering) and/or an Asn (Asn-107, 15-PGDH numbering) contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. Extended SDRs have additional elements in the C-terminal region, and typically have a TGXXGXXG cofactor binding motif. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid synthase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type ketoacyl reductases have a TGXXXGX(1-2)G NAD(P)-binding motif. Some atypical SDRs have lost catalytic activity and/or have an unusual NAD(P)-binding motif and missing or unusual active site residues. Reactions catalyzed within the SDR family include isomerization, decarboxylation, epimerization, C=N bond reduction, dehydratase activity, dehalogenation, Enoyl-CoA reduction, and carbonyl-alcohol oxidoreduction. Length = 256

>gnl|CDD|180413 PRK06128, PRK06128, oxidoreductase; Provisional

 Score = 81.4 bits (201), Expect = 3e-18
 Identities = 60/188 (31%), Positives = 89/188 (47%), Gaps = 9/188 (4%)

Query: 45  VSGKVVIITGASSGIGEHLAYEYARRGACLAL--CARREKSLEEVADTAREIGSPDVITI 102
           + G+  +ITGA SGIG   A  +AR GA +AL      E+   EV    +  G    + +
Sbjct: 53  LQGRKALITGADSGIGRATAIAFAREGADIALNYLPEEEQDAAEVVQLIQAEGR-KAVAL 111

Query: 103 RADVSKVDDCRSLVEETMNHFGRLDHLVNNAGISSVALFEDIVNIT--DFKQIMNINFWG 160
             D+     CR LVE  +   G LD LVN AG    A+ +DI +IT   F      N + 
Sbjct: 112 PGDLKDEAFCRQLVERAVKELGGLDILVNIAG-KQTAV-KDIADITTEQFDATFKTNVYA 169

Query: 161 SVYTTRFAVPHLRYTKGKIVVLSSAASWLTAPRMSFYNASKAALVLFFETLRVEL-GSDV 219
             +  + A+PHL      I+   S  S+  +P +  Y ++KAA+V F + L  ++    +
Sbjct: 170 MFWLCKAAIPHLP-PGASIINTGSIQSYQPSPTLLDYASTKAAIVAFTKALAKQVAEKGI 228

Query: 220 GVTIVTPG 227
            V  V PG
Sbjct: 229 RVNAVAPG 236

Length = 300

>gnl|CDD|187626 cd05368, DHRS6_like_SDR_c, human DHRS6-like, classical (c) SDRs

 Score = 79.8 bits (197), Expect = 6e-18
 Identities = 49/188 (26%), Positives = 83/188 (44%), Gaps = 14/188 (7%)

Query: 47  GKVVIITGASSGIGEHLAYEYARRGACLALCARREKSLEEVADTAREIGSPDVITIRADV 106
           GKV +IT A+ GIG  +A  +AR GA +      E+ L+E+         P + T   DV
Sbjct: 2   GKVALITAAAQGIGRAIALAFAREGANVIATDINEEKLKELE------RGPGITTRVLDV 55

Query: 107 SKVDDCRSLVEETMNHFGRLDHLVNNAGISSVALFEDIVNITDFKQIMNINFWGSVYTTR 166
           +  +     V       GR+D L N AG        D  +  D+   MN+N        +
Sbjct: 56  TDKEQ----VAALAKEEGRIDVLFNCAGFVHHGSILDCED-DDWDFAMNLNVRSMYLMIK 110

Query: 167 FAVPHLRYTK-GKIVVLSSAASWL-TAPRMSFYNASKAALVLFFETLRVE-LGSDVGVTI 223
             +P +   K G I+ +SS AS +   P    Y+ +KAA++   +++  +     +    
Sbjct: 111 AVLPKMLARKDGSIINMSSVASSIKGVPNRFVYSTTKAAVIGLTKSVAADFAQQGIRCNA 170

Query: 224 VTPGFIES 231
           + PG +++
Sbjct: 171 ICPGTVDT 178

Human DHRS6, and similar proteins. These proteins are classical SDRs, with a canonical active site tetrad and a close match to the typical Gly-rich NAD-binding motif. Human DHRS6 is a cytosolic type 2 (R)-hydroxybutyrate dehydrogenase, which catalyses the conversion of (R)-hydroxybutyrate to acetoacetate. Also included in this subgroup is Escherichia coli UcpA (upstream cys P). Classical SDRs are typically about 250 residues long, while extended SDRs are approximately 350 residues. Sequence identity between different SDR enzymes are typically in the 15-30% range, but the enzymes share the Rossmann fold NAD-binding motif and characteristic NAD-binding and catalytic sequence patterns. These enzymes catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase (15-PGDH) numbering). In addition to the Tyr and Lys, there is often an upstream Ser (Ser-138, 15-PGDH numbering) and/or an Asn (Asn-107, 15-PGDH numbering) contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. Extended SDRs have additional elements in the C-terminal region, and typically have a TGXXGXXG cofactor binding motif. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid synthase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type ketoacyl reductases have a TGXXXGX(1-2)G NAD(P)-binding motif. Some atypical SDRs have lost catalytic activity and/or have an unusual NAD(P)-binding motif and missing or unusual active site residues. Reactions catalyzed within the SDR family include isomerization, decarboxylation, epimerization, C=N bond reduction, dehydratase activity, dehalogenation, Enoyl-CoA reduction, and carbonyl-alcohol oxidoreduction. Note: removed : needed to make this chiodl smaller when drew final trees: rmeoved text form description: Other proteins in this subgroup include Thermoplasma acidophilum aldohexose dehydrogenase, which has high dehydrogenase activity against D-mannose, Bacillus subtilis BacC involved in the biosynthesis of the dipeptide bacilysin and its antibiotic moiety anticapsin, Sphingomonas paucimobilis strain B90 LinC, involved in the degradation of hexachlorocyclohexane isomers...... P). Length = 241

>gnl|CDD|212495 cd09807, retinol-DH_like_SDR_c, retinol dehydrogenases (retinol-DHs), classical (c) SDRs

 Score = 79.8 bits (197), Expect = 8e-18
 Identities = 64/220 (29%), Positives = 96/220 (43%), Gaps = 54/220 (24%)

Query: 47  GKVVIITGASSGIGEHLAYEYARRGACLAL-CARREKSLEEVADTAREIGSPDVITIRAD 105
           GK VIITGA++GIG+  A E ARRGA + + C    K  E  A+  R+  + +VI    D
Sbjct: 1   GKTVIITGANTGIGKETARELARRGARVIMACRDMAKCEEAAAEIRRDTLNHEVIVRHLD 60

Query: 106 VSKVDDCRSLVEETMNHFGRLDHLVNNAGISSVALFEDIVNITDFKQIMNINFWGSV--Y 163
           ++ +   R+   E +    RLD L+NNAG                  +M   +  +   +
Sbjct: 61  LASLKSIRAFAAEFLAEEDRLDVLINNAG------------------VMRCPYSKTEDGF 102

Query: 164 TTRFAVPHL--------------RYTKGKIVVLSSAASWLTAPRMSF------------- 196
             +F V HL              +    +IV +SS A    A +++F             
Sbjct: 103 EMQFGVNHLGHFLLTNLLLDLLKKSAPSRIVNVSSLAH--KAGKINFDDLNSEKSYNTGF 160

Query: 197 -YNASKAALVLFFETL--RVELGSDVGVTIVTPGFIESEL 233
            Y  SK A VLF   L  R++ G+ V V  + PG + +EL
Sbjct: 161 AYCQSKLANVLFTRELARRLQ-GTGVTVNALHPGVVRTEL 199

Classical SDR-like subgroup containing retinol-DHs and related proteins. Retinol is processed by a medium chain alcohol dehydrogenase followed by retinol-DHs. Proteins in this subfamily share the glycine-rich NAD-binding motif of the classical SDRs, have a partial match to the canonical active site tetrad, but lack the typical active site Ser. This subgroup includes the human proteins: retinol dehydrogenase -12, -13 ,and -14. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold (alpha/beta folding pattern with a central beta-sheet), an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Classical SDRs are typically about 250 residues long, while extended SDRs are approximately 350 residues. Sequence identity between different SDR enzymes are typically in the 15-30% range, but the enzymes share the Rossmann fold NAD-binding motif and characteristic NAD-binding and catalytic sequence patterns. These enzymes catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase (15-PGDH) numbering). In addition to the Tyr and Lys, there is often an upstream Ser (Ser-138, 15-PGDH numbering) and/or an Asn (Asn-107, 15-PGDH numbering) contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. Extended SDRs have additional elements in the C-terminal region, and typically have a TGXXGXXG cofactor binding motif. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid synthase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type ketoacyl reductases have a TGXXXGX(1-2)G NAD(P)-binding motif. Some atypical SDRs have lost catalytic activity and/or have an unusual NAD(P)-binding motif and missing or unusual active site residues. Reactions catalyzed within the SDR family include isomerization, decarboxylation, epimerization, C=N bond reduction, dehydratase activity, dehalogenation, Enoyl-CoA reduction, and carbonyl-alcohol oxidoreduction. Length = 274

>gnl|CDD|236357 PRK08945, PRK08945, putative oxoacyl-(acyl carrier protein) reductase; Provisional

 Score = 79.5 bits (197), Expect = 9e-18
 Identities = 41/142 (28%), Positives = 67/142 (47%), Gaps = 5/142 (3%)

Query: 47  GKVVIITGASSGIGEHLAYEYARRGACLALCARREKSLEEVADTAREIGSPDVITIRADV 106
            +++++TGA  GIG   A  YAR GA + L  R E+ LE V D     G P    I  D+
Sbjct: 12  DRIILVTGAGDGIGREAALTYARHGATVILLGRTEEKLEAVYDEIEAAGGPQPAIIPLDL 71

Query: 107 SKVD--DCRSLVEETMNHFGRLDHLVNNAGI-SSVALFEDIVNITDFKQIMNINFWGSVY 163
                 + + L +     FGRLD +++NAG+   +   E   +   ++ +M +N   +  
Sbjct: 72  LTATPQNYQQLADTIEEQFGRLDGVLHNAGLLGELGPMEQQ-DPEVWQDVMQVNVNATFM 130

Query: 164 TTRFAVPHLRYTK-GKIVVLSS 184
            T+  +P L  +    +V  SS
Sbjct: 131 LTQALLPLLLKSPAASLVFTSS 152

Length = 247

>gnl|CDD|183718 PRK12746, PRK12746, short chain dehydrogenase; Provisional

 Score = 79.3 bits (195), Expect = 1e-17
 Identities = 64/202 (31%), Positives = 99/202 (49%), Gaps = 17/202 (8%)

Query: 43  EDVSGKVVIITGASSGIGEHLAYEYARRGACLALCARREKSLEEVADTAREIGSPD--VI 100
           +++ GKV ++TGAS GIG  +A   A  GA +A+   R K   +  +T REI S      
Sbjct: 2   KNLDGKVALVTGASRGIGRAIAMRLANDGALVAIHYGRNKQAAD--ETIREIESNGGKAF 59

Query: 101 TIRADVSKVDDCRSLVEETMNHF------GRLDHLVNNAGISSVALFEDIVNITD--FKQ 152
            I AD++ +D  + LVE+  N          +D LVNNAGI +    E   N T+  F +
Sbjct: 60  LIEADLNSIDGVKKLVEQLKNELQIRVGTSEIDILVNNAGIGTQGTIE---NTTEEIFDE 116

Query: 153 IMNINFWGSVYTTRFAVPHLRYTKGKIVVLSSAASWLTAPRMSFYNASKAALVLFFETLR 212
           IM +N     +  +  +P LR  +G+++ +SSA   L       Y  SK AL      L 
Sbjct: 117 IMAVNIKAPFFLIQQTLPLLR-AEGRVINISSAEVRLGFTGSIAYGLSKGALNTMTLPLA 175

Query: 213 VELGS-DVGVTIVTPGFIESEL 233
             LG   + V  + PG+ ++++
Sbjct: 176 KHLGERGITVNTIMPGYTKTDI 197

Length = 254

>gnl|CDD|236110 PRK07831, PRK07831, short chain dehydrogenase; Provisional

 Score = 79.3 bits (196), Expect = 1e-17
 Identities = 51/162 (31%), Positives = 82/162 (50%), Gaps = 9/162 (5%)

Query: 47  GKVVIITGAS-SGIGEHLAYEYARRGACLALCARREKSLEEVADT-AREIGSPDVITIRA 104
           GKVV++T A+ +GIG   A      GA + +    E+ L E AD  A E+G   V  +  
Sbjct: 17  GKVVLVTAAAGTGIGSATARRALEEGARVVISDIHERRLGETADELAAELGLGRVEAVVC 76

Query: 105 DVSKVDDCRSLVEETMNHFGRLDHLVNNAGISSVALFEDIVNITD--FKQIMNINFWGSV 162
           DV+      +L++  +   GRLD LVNNAG+        +V++TD  + +++++   G+ 
Sbjct: 77  DVTSEAQVDALIDAAVERLGRLDVLVNNAGLGGQT---PVVDMTDDEWSRVLDVTLTGTF 133

Query: 163 YTTRFAVPHL--RYTKGKIVVLSSAASWLTAPRMSFYNASKA 202
             TR A+ ++  R   G IV  +S   W      + Y A+KA
Sbjct: 134 RATRAALRYMRARGHGGVIVNNASVLGWRAQHGQAHYAAAKA 175

Length = 262

>gnl|CDD|187649 cd08945, PKR_SDR_c, Polyketide ketoreductase, classical (c) SDR

 Score = 79.1 bits (195), Expect = 1e-17
 Identities = 56/195 (28%), Positives = 92/195 (47%), Gaps = 12/195 (6%)

Query: 48  KVVIITGASSGIGEHLAYEYARRGACLALCARREKSLEEVADTAREIGSPDVITIRADVS 107
           +V ++TGA+SGIG  +A    + G  + +CAR E+ L       RE G  +      DV 
Sbjct: 4   EVALVTGATSGIGLAIARRLGKEGLRVFVCARGEEGLATTVKELREAGV-EADGRTCDVR 62

Query: 108 KVDDCRSLVEETMNHFGRLDHLVNNAGISSVALFEDIVNITD--FKQIMNINFWGSVYTT 165
            V +  +LV   +  +G +D LVNNAG S          + D  +  ++  N  G    T
Sbjct: 63  SVPEIEALVAAAVARYGPIDVLVNNAGRSGGG---ATAELADELWLDVVETNLTGVFRVT 119

Query: 166 RFAVPH---LRYTKGKIVVLSSAASWLTAPRMSFYNASKAALVLFFETLRVELGSDVGVT 222
           +  +     L    G+I+ ++S          + Y+ASK  +V F + L +EL +  G+T
Sbjct: 120 KEVLKAGGMLERGTGRIINIASTGGKQGVVHAAPYSASKHGVVGFTKALGLEL-ARTGIT 178

Query: 223 I--VTPGFIESELTQ 235
           +  V PGF+E+ +  
Sbjct: 179 VNAVCPGFVETPMAA 193

Polyketide ketoreductase (KR) is a classical SDR with a characteristic NAD-binding pattern and active site tetrad. Aromatic polyketides include various aromatic compounds of pharmaceutical interest. Polyketide KR, part of the type II polyketide synthase (PKS) complex, is comprised of stand-alone domains that resemble the domains found in fatty acid synthase and multidomain type I PKS. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold (alpha/beta folding pattern with a central beta-sheet), an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Classical SDRs are typically about 250 residues long, while extended SDRS are approximately 350 residues. Sequence identity between different SDR enzymes are typically in the 15-30% range, but the enzymes share the Rossmann fold NAD-binding motif and characteristic NAD-binding and catalytic sequence patterns. These enzymes have a 3-glycine N-terminal NAD(P)(H)-binding pattern (typically, TGxxxGxG in classical SDRs and TGxxGxxG in extended SDRs), while substrate binding is in the C-terminal region. A critical catalytic Tyr residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase (15-PGDH) numbering), is often found in a conserved YXXXK pattern. In addition to the Tyr and Lys, there is often an upstream Ser (Ser-138, 15-PGDH numbering) and/or an Asn (Asn-107, 15-PGDH numbering) or additional Ser, contributing to the active site. Substrates for these enzymes include sugars, steroids, alcohols, and aromatic compounds. The standard reaction mechanism is a proton relay involving the conserved Tyr and Lys, as well as Asn (or Ser). Some SDR family members, including 17 beta-hydroxysteroid dehydrogenase contain an additional helix-turn-helix motif that is not generally found among SDRs. Length = 258

>gnl|CDD|181605 PRK08993, PRK08993, 2-deoxy-D-gluconate 3-dehydrogenase; Validated

 Score = 78.8 bits (194), Expect = 1e-17
 Identities = 53/202 (26%), Positives = 100/202 (49%), Gaps = 17/202 (8%)

Query: 42  SEDVSGKVVIITGASSGIGEHLAYEYARRGACLAL---CARREKSLEEVADTAREIGSPD 98
           +  + GKV ++TG  +G+G+ +A   A  G C  +        +++E+V    R      
Sbjct: 5   AFSLEGKVAVVTGCDTGLGQGMALGLAEAG-CDIVGINIVEPTETIEQVTALGRRF---- 59

Query: 99  VITIRADVSKVDDCRSLVEETMNHFGRLDHLVNNAGISSVALFEDIVNIT--DFKQIMNI 156
            +++ AD+ K+D   +L+E  +  FG +D LVNNAG+      ED +  +  D+  +MN+
Sbjct: 60  -LSLTADLRKIDGIPALLERAVAEFGHIDILVNNAGLIRR---EDAIEFSEKDWDDVMNL 115

Query: 157 NFWGSVYTTRFAVPHL--RYTKGKIVVLSSAASWLTAPRMSFYNASKAALVLFFETLRVE 214
           N     + ++ A  H   +   GKI+ ++S  S+    R+  Y ASK+ ++     +  E
Sbjct: 116 NIKSVFFMSQAAAKHFIAQGNGGKIINIASMLSFQGGIRVPSYTASKSGVMGVTRLMANE 175

Query: 215 LGS-DVGVTIVTPGFIESELTQ 235
               ++ V  + PG++ +  TQ
Sbjct: 176 WAKHNINVNAIAPGYMATNNTQ 197

Length = 253

>gnl|CDD|180802 PRK07035, PRK07035, short chain dehydrogenase; Provisional

 Score = 77.4 bits (191), Expect = 5e-17
 Identities = 54/201 (26%), Positives = 95/201 (47%), Gaps = 16/201 (7%)

Query: 44  DVSGKVVIITGASSGIGEHLAYEYARRGACLALCARREKSLEEVADTAREIG-SPDVITI 102
           D++GK+ ++TGAS GIGE +A   A++GA + + +R+    + VAD     G   + +  
Sbjct: 5   DLTGKIALVTGASRGIGEAIAKLLAQQGAHVIVSSRKLDGCQAVADAIVAAGGKAEALA- 63

Query: 103 RADVSKVDDCRSLVEETMNHFGRLDHLVNNAGISSVALFEDIVNITD---FKQIMNINFW 159
              + +++   +L        GRLD LVNNA  +    F  I++ TD   F++ +++N  
Sbjct: 64  -CHIGEMEQIDALFAHIRERHGRLDILVNNAAANP--YFGHILD-TDLGAFQKTVDVNIR 119

Query: 160 GSVYTTRFAVPHLR-YTKGKIVVLSSAASWLTAPRMSFYNASKAALVLFFETLRVELGSD 218
           G  + +  A   ++    G IV ++S            Y+ +KAA++   +    E    
Sbjct: 120 GYFFMSVEAGKLMKEQGGGSIVNVASVNGVSPGDFQGIYSITKAAVISMTKAFAKECAPF 179

Query: 219 -VGVTIVTPGFIESELTQGKF 238
            + V  + PG     LT  KF
Sbjct: 180 GIRVNALLPG-----LTDTKF 195

Length = 252

>gnl|CDD|183489 PRK12384, PRK12384, sorbitol-6-phosphate dehydrogenase; Provisional

 Score = 77.4 bits (191), Expect = 6e-17
 Identities = 46/196 (23%), Positives = 85/196 (43%), Gaps = 8/196 (4%)

Query: 47  GKVVIITGASSGIGEHLAYEYARRGACLALCARREKSLEEVADT-AREIGSPDVITIRAD 105
            +V ++ G    +G  L +  A  G  +A+     +    VA     E G        AD
Sbjct: 2   NQVAVVIGGGQTLGAFLCHGLAEEGYRVAVADINSEKAANVAQEINAEYGEGMAYGFGAD 61

Query: 106 VSKVDDCRSLVEETMNHFGRLDHLVNNAGISSVALFEDIVNITDFKQIMNINFWGSVYTT 165
            +      +L       FGR+D LV NAGI+  A   D   + DF + + +N  G     
Sbjct: 62  ATSEQSVLALSRGVDEIFGRVDLLVYNAGIAKAAFITDF-QLGDFDRSLQVNLVGYFLCA 120

Query: 166 RFAVPHL--RYTKGKIVVLSSAASWLTAPRMSFYNASKAALVLFFETLRVELGSDVGVTI 223
           R     +     +G+I+ ++S +  + +   S Y+A+K   V   ++L ++L ++ G+T+
Sbjct: 121 REFSRLMIRDGIQGRIIQINSKSGKVGSKHNSGYSAAKFGGVGLTQSLALDL-AEYGITV 179

Query: 224 --VTPG-FIESELTQG 236
             +  G  ++S + Q 
Sbjct: 180 HSLMLGNLLKSPMFQS 195

Length = 259

>gnl|CDD|236056 PRK07576, PRK07576, short chain dehydrogenase; Provisional

 Score = 76.9 bits (190), Expect = 8e-17
 Identities = 51/190 (26%), Positives = 94/190 (49%), Gaps = 7/190 (3%)

Query: 44  DVSGKVVIITGASSGIGEHLAYEYARRGACLALCARREKSLEEVADTAREIGS--PDVIT 101
           D +GK V++ G +SGI   +A  +AR GA +A+ +R   S E+V     ++    P+ + 
Sbjct: 6   DFAGKNVVVVGGTSGINLGIAQAFARAGANVAVASR---SQEKVDAAVAQLQQAGPEGLG 62

Query: 102 IRADVSKVDDCRSLVEETMNHFGRLDHLVNNAGISSVALFEDIVNITDFKQIMNINFWGS 161
           + ADV       +   +  + FG +D LV+ A  +  A    + +   FK +++I+  G+
Sbjct: 63  VSADVRDYAAVEAAFAQIADEFGPIDVLVSGAAGNFPAPAAGM-SANGFKTVVDIDLLGT 121

Query: 162 VYTTRFAVPHLRYTKGKIVVLSSAASWLTAPRMSFYNASKAALVLFFETLRVELGSD-VG 220
               + A P LR     I+ +S+  +++  P  +   A+KA + +   TL +E G + + 
Sbjct: 122 FNVLKAAYPLLRRPGASIIQISAPQAFVPMPMQAHVCAAKAGVDMLTRTLALEWGPEGIR 181

Query: 221 VTIVTPGFIE 230
           V  + PG I 
Sbjct: 182 VNSIVPGPIA 191

Length = 264

>gnl|CDD|181188 PRK07985, PRK07985, oxidoreductase; Provisional

 Score = 77.3 bits (190), Expect = 1e-16
 Identities = 60/197 (30%), Positives = 95/197 (48%), Gaps = 9/197 (4%)

Query: 42  SEDVSGKVVIITGASSGIGEHLAYEYARRGACLAL--CARREKSLEEVADTAREIGSPDV 99
           S  +  +  ++TG  SGIG   A  YAR GA +A+      E+  ++V     E G   V
Sbjct: 44  SGRLKDRKALVTGGDSGIGRAAAIAYAREGADVAISYLPVEEEDAQDVKKIIEECGRKAV 103

Query: 100 ITIRADVSKVDDCRSLVEETMNHFGRLDHLVNNAGISSVALFEDIVNIT--DFKQIMNIN 157
           + +  D+S     RSLV E     G LD +   AG   VA+  DI ++T   F++   IN
Sbjct: 104 L-LPGDLSDEKFARSLVHEAHKALGGLDIMALVAG-KQVAI-PDIADLTSEQFQKTFAIN 160

Query: 158 FWGSVYTTRFAVPHLRYTKGKIVVLSSAASWLTAPRMSFYNASKAALVLFFETLRVELGS 217
            +   + T+ A+P L      I+  SS  ++  +P +  Y A+KAA++ +   L  ++  
Sbjct: 161 VFALFWLTQEAIPLLP-KGASIITTSSIQAYQPSPHLLDYAATKAAILNYSRGLAKQVAE 219

Query: 218 D-VGVTIVTPGFIESEL 233
             + V IV PG I + L
Sbjct: 220 KGIRVNIVAPGPIWTAL 236

Length = 294

>gnl|CDD|171531 PRK12481, PRK12481, 2-deoxy-D-gluconate 3-dehydrogenase; Provisional

 Score = 76.1 bits (187), Expect = 1e-16
 Identities = 57/200 (28%), Positives = 101/200 (50%), Gaps = 19/200 (9%)

Query: 44  DVSGKVVIITGASSGIGEHLAYEYARRGACLALCARRE--KSLEEVADTAREIGSPDVIT 101
           D++GKV IITG ++G+G+ +A   A+ GA +      E  ++  +V    R+        
Sbjct: 5   DLNGKVAIITGCNTGLGQGMAIGLAKAGADIVGVGVAEAPETQAQVEALGRKFHF----- 59

Query: 102 IRADVSKVDDCRSLVEETMNHFGRLDHLVNNAGISSVALFEDIVNIT--DFKQIMNIN-- 157
           I AD+ +  D  S+V + +   G +D L+NNAGI      +D++     D+  ++NIN  
Sbjct: 60  ITADLIQQKDIDSIVSQAVEVMGHIDILINNAGIIRR---QDLLEFGNKDWDDVININQK 116

Query: 158 --FWGSVYTTRFAVPHLRYTKGKIVVLSSAASWLTAPRMSFYNASKAALVLFFETLRVEL 215
             F+ S    +  V   +   GKI+ ++S  S+    R+  Y ASK+A++     L  EL
Sbjct: 117 TVFFLSQAVAKQFVK--QGNGGKIINIASMLSFQGGIRVPSYTASKSAVMGLTRALATEL 174

Query: 216 GS-DVGVTIVTPGFIESELT 234
              ++ V  + PG++ ++ T
Sbjct: 175 SQYNINVNAIAPGYMATDNT 194

Length = 251

>gnl|CDD|183772 PRK12823, benD, 1,6-dihydroxycyclohexa-2,4-diene-1-carboxylate dehydrogenase; Provisional

 Score = 75.8 bits (187), Expect = 2e-16
 Identities = 32/89 (35%), Positives = 49/89 (55%), Gaps = 2/89 (2%)

Query: 46  SGKVVIITGASSGIGEHLAYEYARRGACLALCARREKSLEEVADTAREIGSPDVITIRAD 105
           +GKVV++TGA+ GIG  +A   A  GA + L  R E  + EVA   R  G  + + + AD
Sbjct: 7   AGKVVVVTGAAQGIGRGVALRAAAEGARVVLVDRSEL-VHEVAAELRAAGG-EALALTAD 64

Query: 106 VSKVDDCRSLVEETMNHFGRLDHLVNNAG 134
           +      ++ +   +  FGR+D L+NN G
Sbjct: 65  LETYAGAQAAMAAAVEAFGRIDVLINNVG 93

Length = 260

>gnl|CDD|168204 PRK05717, PRK05717, oxidoreductase; Validated

 Score = 75.7 bits (186), Expect = 3e-16
 Identities = 57/193 (29%), Positives = 91/193 (47%), Gaps = 19/193 (9%)

Query: 47  GKVVIITGASSGIGEHLAYEYARRGACLALC-ARREKSLEEVADTAREIGSPDVITIRAD 105
           G+V ++TGA+ GIG  +A      G  + L    RE+     +  A+ +G  +   I  D
Sbjct: 10  GRVALVTGAARGIGLGIAAWLIAEGWQVVLADLDRERG----SKVAKALGE-NAWFIAMD 64

Query: 106 VSKVDDCRSLVEETMNHFGRLDHLVNNAGISSVALFEDIVNIT-------DFKQIMNINF 158
           V+      + V E +  FGRLD LV NA I+      D  N T        + +++ +N 
Sbjct: 65  VADEAQVAAGVAEVLGQFGRLDALVCNAAIA------DPHNTTLESLSLAHWNRVLAVNL 118

Query: 159 WGSVYTTRFAVPHLRYTKGKIVVLSSAASWLTAPRMSFYNASKAALVLFFETLRVELGSD 218
            G +   +   P+LR   G IV L+S  +  + P    Y ASK  L+     L + LG +
Sbjct: 119 TGPMLLAKHCAPYLRAHNGAIVNLASTRARQSEPDTEAYAASKGGLLALTHALAISLGPE 178

Query: 219 VGVTIVTPGFIES 231
           + V  V+PG+I++
Sbjct: 179 IRVNAVSPGWIDA 191

Length = 255

>gnl|CDD|182051 PRK09730, PRK09730, putative NAD(P)-binding oxidoreductase; Provisional

 Score = 75.3 bits (185), Expect = 3e-16
 Identities = 59/197 (29%), Positives = 92/197 (46%), Gaps = 16/197 (8%)

Query: 48  KVVIITGASSGIGEHLAYEYARRGACLAL-CARREKSLEEVADTAREIGSPDVITIRADV 106
            + ++TG S GIG   A   A+ G  +A+   +   + +EV +   + G      ++AD+
Sbjct: 2   AIALVTGGSRGIGRATALLLAQEGYTVAVNYQQNLHAAQEVVNLITQAGG-KAFVLQADI 60

Query: 107 SKVDDCRSLVEETMNHFGRLDHLVNNAGISSVALFED--IVNIT--DFKQIMNINFWGSV 162
           S  +   ++      H   L  LVNNAGI    LF    + N+T     ++++ N  G  
Sbjct: 61  SDENQVVAMFTAIDQHDEPLAALVNNAGI----LFTQCTVENLTAERINRVLSTNVTGYF 116

Query: 163 YTTRFAVPHLRY----TKGKIVVLSSAASWLTAP-RMSFYNASKAALVLFFETLRVELGS 217
              R AV  +      + G IV +SSAAS L AP     Y ASK A+      L +E+ +
Sbjct: 117 LCCREAVKRMALKHGGSGGAIVNVSSAASRLGAPGEYVDYAASKGAIDTLTTGLSLEVAA 176

Query: 218 D-VGVTIVTPGFIESEL 233
             + V  V PGFI +E+
Sbjct: 177 QGIRVNCVRPGFIYTEM 193

Length = 247

>gnl|CDD|131680 TIGR02632, RhaD_aldol-ADH, rhamnulose-1-phosphate aldolase/alcohol dehydrogenase

 Score = 77.6 bits (191), Expect = 3e-16
 Identities = 47/185 (25%), Positives = 85/185 (45%), Gaps = 5/185 (2%)

Query: 46  SGKVVIITGASSGIGEHLAYEYARRGACLALCARREKSLEEVA-DTAREIGSPDVITIRA 104
           + +V  +TG + GIG   A   A  GA + L     ++ E VA +   + G+   + ++ 
Sbjct: 413 ARRVAFVTGGAGGIGRETARRLAAEGAHVVLADLNLEAAEAVAAEINGQFGAGRAVALKM 472

Query: 105 DVSKVDDCRSLVEETMNHFGRLDHLVNNAGISSVALFEDIVNITDFKQIMNINFWGSVYT 164
           DV+     ++   +    +G +D +VNNAGI++ + FE+   + +++  ++I   G    
Sbjct: 473 DVTDEQAVKAAFADVALAYGGVDIVVNNAGIATSSPFEETT-LQEWQLNLDILATGYFLV 531

Query: 165 TR--FAVPHLRYTKGKIVVLSSAASWLTAPRMSFYNASKAALVLFFETLRVELGS-DVGV 221
            R  F     +   G IV ++S  +       S Y+A+KAA       L  E G+  + V
Sbjct: 532 AREAFRQMREQGLGGNIVFIASKNAVYAGKNASAYSAAKAAEAHLARCLAAEGGTYGIRV 591

Query: 222 TIVTP 226
             V P
Sbjct: 592 NTVNP 596

Length = 676

>gnl|CDD|181349 PRK08278, PRK08278, short chain dehydrogenase; Provisional

 Score = 75.3 bits (186), Expect = 4e-16
 Identities = 40/140 (28%), Positives = 64/140 (45%), Gaps = 15/140 (10%)

Query: 44  DVSGKVVIITGASSGIGEHLAYEYARRGACLALCA-------RREKSLEEVADTAREIGS 96
            +SGK + ITGAS GIG  +A   AR GA + + A       +   ++   A+     G 
Sbjct: 3   SLSGKTLFITGASRGIGLAIALRAARDGANIVIAAKTAEPHPKLPGTIHTAAEEIEAAGG 62

Query: 97  PDVITIRADVSKVDDCRSLVEETMNHFGRLDHLVNNAGISSVALFEDIVNITDFKQ---I 153
              + +  DV   D   + V + +  FG +D  VNNA   ++   ED    T  K+   +
Sbjct: 63  -QALPLVGDVRDEDQVAAAVAKAVERFGGIDICVNNASAINLTGTED----TPMKRFDLM 117

Query: 154 MNINFWGSVYTTRFAVPHLR 173
             IN  G+   ++  +PHL+
Sbjct: 118 QQINVRGTFLVSQACLPHLK 137

Length = 273

>gnl|CDD|236207 PRK08261, fabG, 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional

 Score = 76.4 bits (189), Expect = 4e-16
 Identities = 68/219 (31%), Positives = 100/219 (45%), Gaps = 37/219 (16%)

Query: 47  GKVVIITGASSGIGEHLAYEYARRGACLALCARREKSLEEVADTAREIGSPDVITIRADV 106
           GKV ++TGA+ GIG  +A   AR GA + +C     + E +A  A  +G      +  D+
Sbjct: 210 GKVALVTGAARGIGAAIAEVLARDGAHV-VCLDVPAAGEALAAVANRVGGT---ALALDI 265

Query: 107 SKVDDCRSLVEETMNHFGRLDHLVNNAGISSVALFED--IVNITDFKQIMNINFWGSVYT 164
           +  D    + E      G LD +V+NAGI+      D  + N+ +         W SV  
Sbjct: 266 TAPDAPARIAEHLAERHGGLDIVVHNAGIT-----RDKTLANMDE-------ARWDSVLA 313

Query: 165 TRFAVPHLRYTK-----------GKIVVLSSAASWLTAPRMSFYNASKAALVLFFETLRV 213
                P LR T+           G+IV +SS +        + Y ASKA ++   + L  
Sbjct: 314 VNLLAP-LRITEALLAAGALGDGGRIVGVSSISGIAGNRGQTNYAASKAGVIGLVQALAP 372

Query: 214 ELGSDVGVTI--VTPGFIESELT-QGKFLT---GRRQNS 246
            L  + G+TI  V PGFIE+++T    F T   GRR NS
Sbjct: 373 LLA-ERGITINAVAPGFIETQMTAAIPFATREAGRRMNS 410

Length = 450

>gnl|CDD|180761 PRK06935, PRK06935, 2-deoxy-D-gluconate 3-dehydrogenase; Provisional

 Score = 74.8 bits (184), Expect = 5e-16
 Identities = 56/208 (26%), Positives = 101/208 (48%), Gaps = 13/208 (6%)

Query: 31  KFLLSVFNSIFSEDVSGKVVIITGASSGIGEHLAYEYARRGACLALCARREKSLEEVADT 90
           KF +  F+      + GKV I+TG ++G+G+  A   A+ GA + +      + +E    
Sbjct: 5   KFSMDFFS------LDGKVAIVTGGNTGLGQGYAVALAKAGADI-IITTHGTNWDETRRL 57

Query: 91  AREIGSPDVITIRADVSKVDDCRSLVEETMNHFGRLDHLVNNAGISSVALFEDIVNITDF 150
             + G   V  ++ D++K +    +V+E +  FG++D LVNNAG    A   +  +  D+
Sbjct: 58  IEKEGR-KVTFVQVDLTKPESAEKVVKEALEEFGKIDILVNNAGTIRRAPLLEYKD-EDW 115

Query: 151 KQIMNINFWGSVY--TTRFAVPHLRYTKGKIVVLSSAASWLTAPRMSFYNASKAALVLFF 208
             +M+IN   SVY  +   A    +   GKI+ ++S  S+     +  Y ASK  +    
Sbjct: 116 NAVMDINL-NSVYHLSQAVAKVMAKQGSGKIINIASMLSFQGGKFVPAYTASKHGVAGLT 174

Query: 209 ETLRVELGS-DVGVTIVTPGFIESELTQ 235
           +    EL + ++ V  + PG+I++  T 
Sbjct: 175 KAFANELAAYNIQVNAIAPGYIKTANTA 202

Length = 258

>gnl|CDD|180343 PRK05993, PRK05993, short chain dehydrogenase; Provisional

 Score = 74.7 bits (184), Expect = 7e-16
 Identities = 56/196 (28%), Positives = 87/196 (44%), Gaps = 21/196 (10%)

Query: 48  KVVIITGASSGIGEHLAYEYARRGACLALCARREKSLEEVADTAREIGSPDVITIRADVS 107
           + ++ITG SSGIG + A      G  +    R+E+ +  +     E         + D +
Sbjct: 5   RSILITGCSSGIGAYCARALQSDGWRVFATCRKEEDVAALEAEGLE-------AFQLDYA 57

Query: 108 KVDDCRSLVEETMNHF-GRLDHLVNNAGISSVALFEDIVNITDFKQIMNINFWGSVYTTR 166
           + +   +LV + +    GRLD L NN         ED+      +     NF+G    TR
Sbjct: 58  EPESIAALVAQVLELSGGRLDALFNNGAYGQPGAVEDL-PTEALRAQFEANFFGWHDLTR 116

Query: 167 FAVPHLR-YTKGKIVVLSS-----AASWLTAPRMSFYNASKAALVLFFETLRVEL-GSDV 219
             +P +R   +G+IV  SS        +  A     YNASK A+     TLR+EL GS +
Sbjct: 117 RVIPVMRKQGQGRIVQCSSILGLVPMKYRGA-----YNASKFAIEGLSLTLRMELQGSGI 171

Query: 220 GVTIVTPGFIESELTQ 235
            V+++ PG IE+    
Sbjct: 172 HVSLIEPGPIETRFRA 187

Length = 277

>gnl|CDD|183719 PRK12747, PRK12747, short chain dehydrogenase; Provisional

 Score = 73.2 bits (179), Expect = 2e-15
 Identities = 59/198 (29%), Positives = 102/198 (51%), Gaps = 13/198 (6%)

Query: 45  VSGKVVIITGASSGIGEHLAYEYARRGACLAL--CARREKSLEEVADTAREIGSPDVITI 102
           + GKV ++TGAS GIG  +A   A  GA +A+    R+E++ E V +     GS    +I
Sbjct: 2   LKGKVALVTGASRGIGRAIAKRLANDGALVAIHYGNRKEEAEETVYEIQSNGGS--AFSI 59

Query: 103 RADVSKVDDCRSLVE----ETMNHFG--RLDHLVNNAGISSVALFEDIVNITDFKQIMNI 156
            A++  +    +L      E  N  G  + D L+NNAGI   A  E+      F +++++
Sbjct: 60  GANLESLHGVEALYSSLDNELQNRTGSTKFDILINNAGIGPGAFIEETTE-QFFDRMVSV 118

Query: 157 NFWGSVYTTRFAVPHLRYTKGKIVVLSSAASWLTAPRMSFYNASKAALVLFFETLRVELG 216
           N     +  + A+  LR    +I+ +SSAA+ ++ P    Y+ +K A+     TL  +LG
Sbjct: 119 NAKAPFFIIQQALSRLR-DNSRIINISSAATRISLPDFIAYSMTKGAINTMTFTLAKQLG 177

Query: 217 S-DVGVTIVTPGFIESEL 233
           +  + V  + PGFI++++
Sbjct: 178 ARGITVNAILPGFIKTDM 195

Length = 252

>gnl|CDD|181517 PRK08642, fabG, 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional

 Score = 72.0 bits (177), Expect = 4e-15
 Identities = 51/190 (26%), Positives = 94/190 (49%), Gaps = 17/190 (8%)

Query: 44  DVSGKVVIITGASSGIGEHLAYEYARRGACLALCARREKSLEEVADTAREIGSPDVITIR 103
            +S + V++TG S G+G  +A  +AR GA + +   +  S +     A E+G    I ++
Sbjct: 2   QISEQTVLVTGGSRGLGAAIARAFAREGARVVVNYHQ--SEDAAEALADELG-DRAIALQ 58

Query: 104 ADVSKVDDCRSLVEETMNHFGR-LDHLVNNAGI------SSVALFEDIVNITDFKQIMNI 156
           ADV+  +  +++      HFG+ +  +VNNA         +    +DI    DF+Q +  
Sbjct: 59  ADVTDREQVQAMFATATEHFGKPITTVVNNALADFSFDGDARKKADDI-TWEDFQQQLEG 117

Query: 157 NFWGSVYTTRFAVPHLRYTK-GKIVVLSSAASWLTAPRMSF--YNASKAALVLFFETLRV 213
           +  G++ T + A+P +R    G+I+ + +  +    P + +  Y  +KAAL+     L  
Sbjct: 118 SVKGALNTIQAALPGMREQGFGRIINIGT--NLFQNPVVPYHDYTTAKAALLGLTRNLAA 175

Query: 214 ELGSDVGVTI 223
           ELG   G+T+
Sbjct: 176 ELGPY-GITV 184

Length = 253

>gnl|CDD|169389 PRK08339, PRK08339, short chain dehydrogenase; Provisional

 Score = 72.2 bits (177), Expect = 4e-15
 Identities = 56/192 (29%), Positives = 98/192 (51%), Gaps = 6/192 (3%)

Query: 44  DVSGKVVIITGASSGIGEHLAYEYARRGACLALCARREKSLEEVADTAREIGSPDVITIR 103
           D+SGK+   T +S GIG  +A   AR GA + L +R E++L++  +  +   + DV  I 
Sbjct: 5   DLSGKLAFTTASSKGIGFGVARVLARAGADVILLSRNEENLKKAREKIKSESNVDVSYIV 64

Query: 104 ADVSKVDDCRSLVEETMNHFGRLDHLVNNAGISSVALFEDIVNITDFKQIMNINFWGSVY 163
           AD++K +D    V+E  N  G  D    + G      F ++ ++ D++  + +  + +VY
Sbjct: 65  ADLTKREDLERTVKELKN-IGEPDIFFFSTGGPKPGYFMEM-SMEDWEGAVKLLLYPAVY 122

Query: 164 TTRFAVPHL-RYTKGKIVVLSSAASWLTAPRMSFYNASKAALVLFFETLRVELGSDVGVT 222
            TR  VP + R   G+I+  +S A     P ++  N  + ++     TL  ELG   G+T
Sbjct: 123 LTRALVPAMERKGFGRIIYSTSVAIKEPIPNIALSNVVRISMAGLVRTLAKELGPK-GIT 181

Query: 223 I--VTPGFIESE 232
           +  + PG I ++
Sbjct: 182 VNGIMPGIIRTD 193

Length = 263

>gnl|CDD|187631 cd05373, SDR_c10, classical (c) SDR, subgroup 10

 Score = 71.6 bits (176), Expect = 5e-15
 Identities = 44/172 (25%), Positives = 72/172 (41%), Gaps = 6/172 (3%)

Query: 49  VVIITGASSGIGEHLAYEYARRGACLALCARREKSLEEVADTAREIGSPDVITIRADVSK 108
           V  + GA  G+G  +A  +A  G  +AL ARRE  LE +              +  D   
Sbjct: 1   VAAVVGAGDGLGAAIARRFAAEGFSVALAARREAKLEALLVDIIRDAGGSAKAVPTDARD 60

Query: 109 VDDCRSLVEETMNHFGRLDHLVNNAGISSVALFEDIVNIT--DFKQIMNINFWGSVYTTR 166
            D+  +L +      G L+ LV NAG ++V     I+  T   F+++  +  +G     R
Sbjct: 61  EDEVIALFDLIEEEIGPLEVLVYNAG-ANVWF--PILETTPRVFEKVWEMAAFGGFLAAR 117

Query: 167 FAVPH-LRYTKGKIVVLSSAASWLTAPRMSFYNASKAALVLFFETLRVELGS 217
            A    L   +G I+   + AS       + +  +K AL    +++  ELG 
Sbjct: 118 EAAKRMLARGRGTIIFTGATASLRGRAGFAAFAGAKFALRALAQSMARELGP 169

This subgroup resembles the classical SDRs, but has an incomplete match to the canonical glycine rich NAD-binding motif and lacks the typical active site tetrad (instead of the critical active site Tyr, it has Phe, but contains the nearby Lys). SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold (alpha/beta folding pattern with a central beta-sheet), an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Classical SDRs are typically about 250 residues long, while extended SDRs are approximately 350 residues. Sequence identity between different SDR enzymes are typically in the 15-30% range, but the enzymes share the Rossmann fold NAD-binding motif and characteristic NAD-binding and catalytic sequence patterns. These enzymes catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase (15-PGDH) numbering). In addition to the Tyr and Lys, there is often an upstream Ser (Ser-138, 15-PGDH numbering) and/or an Asn (Asn-107, 15-PGDH numbering) contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. Extended SDRs have additional elements in the C-terminal region, and typically have a TGXXGXXG cofactor binding motif. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid synthase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type ketoacyl reductases have a TGXXXGX(1-2)G NAD(P)-binding motif. Some atypical SDRs have lost catalytic activity and/or have an unusual NAD(P)-binding motif and missing or unusual active site residues. Reactions catalyzed within the SDR family include isomerization, decarboxylation, epimerization, C=N bond reduction, dehydratase activity, dehalogenation, Enoyl-CoA reduction, and carbonyl-alcohol oxidoreduction. Length = 238

>gnl|CDD|132250 TIGR03206, benzo_BadH, 2-hydroxycyclohexanecarboxyl-CoA dehydrogenase

 Score = 71.5 bits (175), Expect = 6e-15
 Identities = 50/191 (26%), Positives = 86/191 (45%), Gaps = 4/191 (2%)

Query: 45  VSGKVVIITGASSGIGEHLAYEYARRGACLALCARREKSLEEVADTAREIGSPDVITIRA 104
           +  K  I+TG   GIG      +A  GA +A+     ++ E+VA   R  G  +      
Sbjct: 1   LKDKTAIVTGGGGGIGGATCRRFAEEGAKVAVFDLNREAAEKVAADIRAKGG-NAQAFAC 59

Query: 105 DVSKVDDCRSLVEETMNHFGRLDHLVNNAGISSVALFEDIVNITDFKQIMNINFWGSVYT 164
           D++  D   + V       G +D LVNNAG      F        +++++ IN  G+++ 
Sbjct: 60  DITDRDSVDTAVAAAEQALGPVDVLVNNAGWDKFGPFTK-TEPPLWERLIAINLTGALHM 118

Query: 165 TRFAVPHLRYTK-GKIVVLSSAASWLTAPRMSFYNASKAALVLFFETLRVELG-SDVGVT 222
               +P +     G+IV ++S A+ + +   + Y A K  LV F +T+  E     + V 
Sbjct: 119 HHAVLPGMVERGAGRIVNIASDAARVGSSGEAVYAACKGGLVAFSKTMAREHARHGITVN 178

Query: 223 IVTPGFIESEL 233
           +V PG  ++ L
Sbjct: 179 VVCPGPTDTAL 189

Members of this protein family are the enzyme 2-hydroxycyclohexanecarboxyl-CoA dehydrogenase. The enzymatic properties were confirmed experimentally in Rhodopseudomonas palustris; the enzyme is homotetrameric, and not sensitive to oxygen. This enzyme is part of proposed pathway for degradation of benzoyl-CoA to 3-hydroxypimeloyl-CoA that differs from the analogous in Thauera aromatica. It also may occur in degradation of the non-aromatic compound cyclohexane-1-carboxylate. Length = 250

>gnl|CDD|181225 PRK08085, PRK08085, gluconate 5-dehydrogenase; Provisional

 Score = 71.3 bits (175), Expect = 7e-15
 Identities = 54/203 (26%), Positives = 94/203 (46%), Gaps = 12/203 (5%)

Query: 38  NSIFSEDVSGKVVIITGASSGIGEHLAYEYARRGACLALCARREKSLEEVADTAREIGSP 97
           N +FS  ++GK ++ITG++ GIG  LA   A  GA + +     +  E      R+ G  
Sbjct: 2   NDLFS--LAGKNILITGSAQGIGFLLATGLAEYGAEIIINDITAERAELAVAKLRQEGI- 58

Query: 98  DVITIRADVSKVDDCRSLVEETMNHFGRLDHLVNNAGISSVALFEDIVNITDFKQIMNIN 157
                  +V+   +  + +E      G +D L+NNAGI     F +     ++  ++ +N
Sbjct: 59  KAHAAPFNVTHKQEVEAAIEHIEKDIGPIDVLINNAGIQRRHPFTEFPE-QEWNDVIAVN 117

Query: 158 ----FWGSVYTTRFAVPHLRYTKGKIVVLSSAASWLTAPRMSFYNASKAALVLFFETLRV 213
               F  S    R+ V       GKI+ + S  S L    ++ Y ASK A+ +    + V
Sbjct: 118 QTAVFLVSQAVARYMVKRQA---GKIINICSMQSELGRDTITPYAASKGAVKMLTRGMCV 174

Query: 214 ELGS-DVGVTIVTPGFIESELTQ 235
           EL   ++ V  + PG+ ++E+T+
Sbjct: 175 ELARHNIQVNGIAPGYFKTEMTK 197

Length = 254

>gnl|CDD|235914 PRK07041, PRK07041, short chain dehydrogenase; Provisional

 Score = 70.8 bits (174), Expect = 8e-15
 Identities = 47/184 (25%), Positives = 77/184 (41%), Gaps = 13/184 (7%)

Query: 51  IITGASSGIGEHLAYEYARRGACLALCARREKSLEEVADTAREIGSP-DVITIRADVSKV 109
           ++ G SSGIG  LA  +A  GA + + +R   S + +A  AR +G    V T   D++  
Sbjct: 1   LVVGGSSGIGLALARAFAAEGARVTIASR---SRDRLAAAARALGGGAPVRTAALDITDE 57

Query: 110 DDCRSLVEETMNHFGRLDHLVNNAGISSVALFEDIVNITDFKQIMNINFWGSVYTTRFAV 169
               +   E     G  DH+V  A  +       +  +   +  M+  FWG+    R   
Sbjct: 58  AAVDAFFAEA----GPFDHVVITAADTPGGPVRAL-PLAAAQAAMDSKFWGAYRVAR--A 110

Query: 170 PHLRYTKGKIVVLSSAASWLTAPRMSFYNASKAALVLFFETLRVELGSDVGVTIVTPGFI 229
             +    G +  +S  A+   +       A  AAL      L +EL + V V  V+PG +
Sbjct: 111 ARIAPG-GSLTFVSGFAAVRPSASGVLQGAINAALEALARGLALEL-APVRVNTVSPGLV 168

Query: 230 ESEL 233
           ++ L
Sbjct: 169 DTPL 172

Length = 230

>gnl|CDD|187666 cd09806, type1_17beta-HSD-like_SDR_c, human estrogenic 17beta-hydroxysteroid dehydrogenase type 1 (type 1 17beta-HSD)-like, classical (c) SDRs

 Score = 71.3 bits (175), Expect = 9e-15
 Identities = 54/197 (27%), Positives = 83/197 (42%), Gaps = 22/197 (11%)

Query: 48  KVVIITGASSGIGEHLAYEYARRGAC----------LALCARREKSLEEVADTAREIGSP 97
            VV+ITG SSGIG HLA   A   +           L    R  ++   +A    E    
Sbjct: 1   TVVLITGCSSGIGLHLAVRLASDPSKRFKVYATMRDLKKKGRLWEAAGALAGGTLETLQL 60

Query: 98  DVITIRADVSKVDDCRSLVEETMNHFGRLDHLVNNAGISSVALFEDIVNITDFKQIMNIN 157
           DV     D   V      V E       +D LV NAG+  +   E + +      + ++N
Sbjct: 61  DV----CDSKSVAAAVERVTE-----RHVDVLVCNAGVGLLGPLEAL-SEDAMASVFDVN 110

Query: 158 FWGSVYTTRFAVPHL-RYTKGKIVVLSSAASWLTAPRMSFYNASKAALVLFFETLRVELG 216
            +G+V   +  +P + R   G+I+V SS       P    Y ASK AL    E+L V+L 
Sbjct: 111 VFGTVRMLQAFLPDMKRRGSGRILVTSSVGGLQGLPFNDVYCASKFALEGLCESLAVQLL 170

Query: 217 S-DVGVTIVTPGFIESE 232
             +V ++++  G + + 
Sbjct: 171 PFNVHLSLIECGPVHTA 187

17beta-hydroxysteroid dehydrogenases are a group of isozymes that catalyze activation and inactivation of estrogen and androgens. This classical SDR subgroup includes human type 1 17beta-HSD, human retinol dehydrogenase 8, zebrafish photoreceptor associated retinol dehydrogenase type 2, and a chicken ovary-specific 17beta-hydroxysteroid dehydrogenase. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold (alpha/beta folding pattern with a central beta-sheet), an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Classical SDRs are typically about 250 residues long, while extended SDRs are approximately 350 residues. Sequence identity between different SDR enzymes are typically in the 15-30% range, but the enzymes share the Rossmann fold NAD-binding motif and characteristic NAD-binding and catalytic sequence patterns. These enzymes catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase (15-PGDH) numbering). In addition to the Tyr and Lys, there is often an upstream Ser (Ser-138, 15-PGDH numbering) and/or an Asn (Asn-107, 15-PGDH numbering) contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. Extended SDRs have additional elements in the C-terminal region, and typically have a TGXXGXXG cofactor binding motif. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid synthase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type ketoacyl reductases have a TGXXXGX(1-2)G NAD(P)-binding motif. Some atypical SDRs have lost catalytic activity and/or have an unusual NAD(P)-binding motif and missing or unusual active site residues. Reactions catalyzed within the SDR family include isomerization, decarboxylation, epimerization, C=N bond reduction, dehydratase activity, dehalogenation, Enoyl-CoA reduction, and carbonyl-alcohol oxidoreduction. Length = 258

>gnl|CDD|212496 cd11730, Tthb094_like_SDR_c, Tthb094 and related proteins, classical (c) SDRs

 Score = 70.2 bits (172), Expect = 1e-14
 Identities = 55/185 (29%), Positives = 86/185 (46%), Gaps = 15/185 (8%)

Query: 50  VIITGASSGIGEHLAYEYARRGACLALCARREKSLEEVADTAREIGSPDVITIRADVSKV 109
            +I GA+ GIG  LA   A RG  L L  R   +L   A  A E+G+       ADV+  
Sbjct: 1   ALILGATGGIGRALARALAGRGWRLLLSGRDAGAL---AGLAAEVGALARP---ADVAAE 54

Query: 110 DDCRSLVEETMNHFGRLDHLVNNAG-ISSVALFEDIVNITDFKQIMNINFWGSVYTTRFA 168
            +  +L +E     G LD LV  AG I    L         +++I++ N  G+    + A
Sbjct: 55  LEVWALAQEL----GPLDLLVYAAGAILGKPLART--KPAAWRRILDANLTGAALVLKHA 108

Query: 169 VPHLRYTKGKIVVLSSAASWLTAPRMSFYNASKAALVLFFETLRVELGSDVGVTIVTPGF 228
           +  L     ++V L +    +  P +S Y A+KAAL  + E  R E+   + +T+V P  
Sbjct: 109 LALLA-AGARLVFLGAYPELVMLPGLSAYAAAKAALEAYVEVARKEV-RGLRLTLVRPPA 166

Query: 229 IESEL 233
           +++ L
Sbjct: 167 VDTGL 171

Tthb094 from Thermus Thermophilus is a classical SDR which binds NADP. Members of this subgroup contain the YXXXK active site characteristic of SDRs. Also, an upstream Asn residue of the canonical catalytic tetrad is partially conserved in this subgroup of proteins of undetermined function. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold (alpha/beta folding pattern with a central beta-sheet), an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Classical SDRs are typically about 250 residues long, while extended SDRs are approximately 350 residues. Sequence identity between different SDR enzymes are typically in the 15-30% range, but the enzymes share the Rossmann fold NAD-binding motif and characteristic NAD-binding and catalytic sequence patterns. These enzymes catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, human prostaglandin dehydrogenase (PGDH) numbering). In addition to the Tyr and Lys, there is often an upstream Ser (Ser-138, PGDH numbering) and/or an Asn (Asn-107, PGDH numbering) contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. Extended SDRs have additional elements in the C-terminal region, and typically have a TGXXGXXG cofactor binding motif. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid synthase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type ketoacyl reductases have a TGXXXGX(1-2)G NAD(P)-binding motif. Some atypical SDRs have lost catalytic activity and/or have an unusual NAD(P)-binding motif and missing or unusual active site residues. Reactions catalyzed within the SDR family include isomerization, decarboxylation, epimerization, C=N bond reduction, dehydratase activity, dehalogenation, Enoyl-CoA reduction, and carbonyl-alcohol oxidoreduction. Length = 206

>gnl|CDD|235703 PRK06125, PRK06125, short chain dehydrogenase; Provisional

 Score = 71.2 bits (175), Expect = 1e-14
 Identities = 60/188 (31%), Positives = 86/188 (45%), Gaps = 11/188 (5%)

Query: 44  DVSGKVVIITGASSGIGEHLAYEYARRGACLALCARREKSLEEVADTAREIGSPDVITIR 103
            ++GK V+ITGAS GIG   A  +A  G  L L AR   +LE +A   R     DV    
Sbjct: 4   HLAGKRVLITGASKGIGAAAAEAFAAEGCHLHLVARDADALEALAADLRAAHGVDVAVHA 63

Query: 104 ADVSKVDDCRSLVEETMNHFGRLDHLVNNAG-ISSVALFEDIVNITDFKQIMNINFWGSV 162
            D+S  +    L  E     G +D LVNNAG I    L  D V+   ++    +  +G +
Sbjct: 64  LDLSSPEAREQLAAEA----GDIDILVNNAGAIPGGGL--DDVDDAAWRAGWELKVFGYI 117

Query: 163 YTTRFAVPHLRYTKGKIVVLSSAASWLTAPRMSFY--NASKAALVLFFETLRVE-LGSDV 219
             TR A P ++  +G  V+++   +    P   +   +A  AAL+ F   L  + L   V
Sbjct: 118 DLTRLAYPRMK-ARGSGVIVNVIGAAGENPDADYICGSAGNAALMAFTRALGGKSLDDGV 176

Query: 220 GVTIVTPG 227
            V  V PG
Sbjct: 177 RVVGVNPG 184

Length = 259

>gnl|CDD|235933 PRK07097, PRK07097, gluconate 5-dehydrogenase; Provisional

 Score = 69.3 bits (170), Expect = 5e-14
 Identities = 54/194 (27%), Positives = 99/194 (51%), Gaps = 6/194 (3%)

Query: 44  DVSGKVVIITGASSGIGEHLAYEYARRGACLALCARREKSLEEVADTAREIGSPDVITIR 103
            + GK+ +ITGAS GIG  +A  YA+ GA +      ++ +++     RE+G  +     
Sbjct: 7   SLKGKIALITGASYGIGFAIAKAYAKAGATIVFNDINQELVDKGLAAYRELGI-EAHGYV 65

Query: 104 ADVSKVDDCRSLVEETMNHFGRLDHLVNNAG-ISSVALFEDIVNITDFKQIMNINFWGSV 162
            DV+  D  +++V +     G +D LVNNAG I  + + E  ++  DF+Q+++I+     
Sbjct: 66  CDVTDEDGVQAMVSQIEKEVGVIDILVNNAGIIKRIPMLE--MSAEDFRQVIDIDLNAPF 123

Query: 163 YTTRFAVPHL-RYTKGKIVVLSSAASWLTAPRMSFYNASKAALVLFFETLRVELGS-DVG 220
             ++  +P + +   GKI+ + S  S L    +S Y A+K  L +  + +  E G  ++ 
Sbjct: 124 IVSKAVIPSMIKKGHGKIINICSMMSELGRETVSAYAAAKGGLKMLTKNIASEYGEANIQ 183

Query: 221 VTIVTPGFIESELT 234
              + PG+I +  T
Sbjct: 184 CNGIGPGYIATPQT 197

Length = 265

>gnl|CDD|236040 PRK07523, PRK07523, gluconate 5-dehydrogenase; Provisional

 Score = 68.6 bits (168), Expect = 7e-14
 Identities = 47/162 (29%), Positives = 78/162 (48%), Gaps = 3/162 (1%)

Query: 44  DVSGKVVIITGASSGIGEHLAYEYARRGACLALCARREKSLEEVADTAREIGSPDVITIR 103
           D++G+  ++TG+S GIG  LA   A+ GA + L  R    L   A++ +  G      + 
Sbjct: 7   DLTGRRALVTGSSQGIGYALAEGLAQAGAEVILNGRDPAKLAAAAESLKGQGL-SAHALA 65

Query: 104 ADVSKVDDCRSLVEETMNHFGRLDHLVNNAGISSVALFEDIVNITDFKQIMNINFWGSVY 163
            DV+  D  R+ ++      G +D LVNNAG+      ED      F++++  N     Y
Sbjct: 66  FDVTDHDAVRAAIDAFEAEIGPIDILVNNAGMQFRTPLEDF-PADAFERLLRTNISSVFY 124

Query: 164 TTRFAVPHL-RYTKGKIVVLSSAASWLTAPRMSFYNASKAAL 204
             +    H+     GKI+ ++S  S L  P ++ Y A+K A+
Sbjct: 125 VGQAVARHMIARGAGKIINIASVQSALARPGIAPYTATKGAV 166

Length = 255

>gnl|CDD|182531 PRK10538, PRK10538, malonic semialdehyde reductase; Provisional

 Score = 68.2 bits (167), Expect = 9e-14
 Identities = 53/184 (28%), Positives = 96/184 (52%), Gaps = 8/184 (4%)

Query: 49  VVIITGASSGIGEHLAYEYARRGACLALCARREKSLEEVADTAREIGSPDVITIRADVSK 108
           +V++TGA++G GE +   + ++G  +    RR++ L+E+ D   E+G  ++   + DV  
Sbjct: 2   IVLVTGATAGFGECITRRFIQQGHKVIATGRRQERLQELKD---ELGD-NLYIAQLDVRN 57

Query: 109 VDDCRSLVEETMNHFGRLDHLVNNAGISSVALFEDIVNITDFKQIMNINFWGSVYTTRFA 168
                 ++      +  +D LVNNAG++         ++ D++ +++ N  G VY TR  
Sbjct: 58  RAAIEEMLASLPAEWRNIDVLVNNAGLALGLEPAHKASVEDWETMIDTNNKGLVYMTRAV 117

Query: 169 VPHL-RYTKGKIVVL-SSAASWLTAPRMSFYNASKAALVLFFETLRVEL-GSDVGVTIVT 225
           +P +     G I+ + S+A SW  A   + Y A+KA +  F   LR +L G+ V VT + 
Sbjct: 118 LPGMVERNHGHIINIGSTAGSWPYAGG-NVYGATKAFVRQFSLNLRTDLHGTAVRVTDIE 176

Query: 226 PGFI 229
           PG +
Sbjct: 177 PGLV 180

Length = 248

>gnl|CDD|181120 PRK07792, fabG, 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional

 Score = 68.7 bits (168), Expect = 1e-13
 Identities = 50/174 (28%), Positives = 81/174 (46%), Gaps = 18/174 (10%)

Query: 44  DVSGKVVIITGASSGIGEHLAYEYARRGACLALCARREKSLEEVADTAREIGSP--DVIT 101
           D+SGKV ++TGA++G+G   A   AR GA   +      S  + +D   EI +     + 
Sbjct: 9   DLSGKVAVVTGAAAGLGRAEALGLARLGA--TVVVNDVASALDASDVLDEIRAAGAKAVA 66

Query: 102 IRADVSKVDDCRSLVEETMNHFGRLDHLVNNAGISSVALFEDIVNITD--FKQIMNINFW 159
           +  D+S+      LV  T    G LD +VNNAGI+   +   + N++D  +  ++ ++  
Sbjct: 67  VAGDISQRATADELV-ATAVGLGGLDIVVNNAGITRDRM---LFNMSDEEWDAVIAVHLR 122

Query: 160 GSVYTTRFAVPHLRYTK--------GKIVVLSSAASWLTAPRMSFYNASKAALV 205
           G    TR A  + R           G+IV  SS A  +     + Y A+KA + 
Sbjct: 123 GHFLLTRNAAAYWRAKAKAAGGPVYGRIVNTSSEAGLVGPVGQANYGAAKAGIT 176

Length = 306

>gnl|CDD|235702 PRK06124, PRK06124, gluconate 5-dehydrogenase; Provisional

 Score = 67.8 bits (166), Expect = 2e-13
 Identities = 46/198 (23%), Positives = 82/198 (41%), Gaps = 18/198 (9%)

Query: 44  DVSGKVVIITGASSGIGEHLAYEYARRGACLALCARREKSLEEVADTAREIG---SPDVI 100
            ++G+V ++TG++ G+G  +A   A  GA + +  R   +LE      R  G        
Sbjct: 8   SLAGQVALVTGSARGLGFEIARALAGAGAHVLVNGRNAATLEAAVAALRAAGGAAEALAF 67

Query: 101 TIRADVSKVDDCRSLVEETMNHFGRLDHLVNNAGI---SSVALFEDIVNITDFKQIMNIN 157
               D++  +   +         GRLD LVNN G      +A  +D       + ++  +
Sbjct: 68  ----DIADEEAVAAAFARIDAEHGRLDILVNNVGARDRRPLAELDD----AAIRALLETD 119

Query: 158 FWGSVYTTRFAVPHL-RYTKGKIVVLSSAASWLTAPRMSFYNASKAALVLFFETLRVELG 216
               +  +R A   + R   G+I+ ++S A  +     + Y A+K  L      L  E G
Sbjct: 120 LVAPILLSRLAAQRMKRQGYGRIIAITSIAGQVARAGDAVYPAAKQGLTGLMRALAAEFG 179

Query: 217 SDVGVTI--VTPGFIESE 232
              G+T   + PG+  +E
Sbjct: 180 PH-GITSNAIAPGYFATE 196

Length = 256

>gnl|CDD|180300 PRK05875, PRK05875, short chain dehydrogenase; Provisional

 Score = 67.9 bits (166), Expect = 2e-13
 Identities = 56/197 (28%), Positives = 89/197 (45%), Gaps = 19/197 (9%)

Query: 48  KVVIITGASSGIGEHLAYEYARRGACLALCARREKSLEEVADTAREIGSPD----VITIR 103
           +  ++TG  SGIG+ +A      GA + +  R     +++A  A EI +      V    
Sbjct: 8   RTYLVTGGGSGIGKGVAAGLVAAGAAVMIVGRNP---DKLAAAAEEIEALKGAGAVRYEP 64

Query: 104 ADVSKVDDCRSLVEETMNHFGRLDHLVNNAGISSVALFEDIVNITD-----FKQIMNINF 158
           ADV+  D     V+      GRL  +V+ AG S     E I  IT      +++ +++N 
Sbjct: 65  ADVTDEDQVARAVDAATAWHGRLHGVVHCAGGS-----ETIGPITQIDSDAWRRTVDLNV 119

Query: 159 WGSVYTTRFAVPHL-RYTKGKIVVLSSAASWLTAPRMSFYNASKAALVLFFETLRVELG- 216
            G++Y  + A   L R   G  V +SS A+  T      Y  +K+A+    +    ELG 
Sbjct: 120 NGTMYVLKHAARELVRGGGGSFVGISSIAASNTHRWFGAYGVTKSAVDHLMKLAADELGP 179

Query: 217 SDVGVTIVTPGFIESEL 233
           S V V  + PG I ++L
Sbjct: 180 SWVRVNSIRPGLIRTDL 196

Length = 276

>gnl|CDD|188169 TIGR01829, AcAcCoA_reduct, acetoacetyl-CoA reductase

 Score = 67.1 bits (164), Expect = 2e-13
 Identities = 50/195 (25%), Positives = 91/195 (46%), Gaps = 15/195 (7%)

Query: 48  KVVIITGASSGIGEHLAYEYARRG-----ACLALCARREKSLEEVADTAREIGSPDVITI 102
           ++ ++TG   GIG  +    A+ G      C     R E  L+E     +     D   +
Sbjct: 1   RIALVTGGMGGIGTAICQRLAKDGYRVAANCGPNEERAEAWLQE-----QGALGFDFRVV 55

Query: 103 RADVSKVDDCRSLVEETMNHFGRLDHLVNNAGISSVALFEDIVNITDFKQIMNINFWGSV 162
             DVS  + C++ V +     G +D LVNNAGI+  A F+ +     +  +++ N     
Sbjct: 56  EGDVSSFESCKAAVAKVEAELGPIDVLVNNAGITRDATFKKMTY-EQWSAVIDTNLNSVF 114

Query: 163 YTTRFAVPHLRYTK-GKIVVLSSAASWLTAPRMSFYNASKAALVLFFETLRVELGSDVGV 221
             T+  +  +R    G+I+ +SS          + Y+A+KA ++ F + L  E G+  GV
Sbjct: 115 NVTQPVIDGMRERGWGRIINISSVNGQKGQFGQTNYSAAKAGMIGFTKALAQE-GATKGV 173

Query: 222 TI--VTPGFIESELT 234
           T+  ++PG+I +++ 
Sbjct: 174 TVNTISPGYIATDMV 188

This model represent acetoacetyl-CoA reductase, a member of the family short-chain-alcohol dehydrogenases. Note that, despite the precision implied by the enzyme name, the reaction of EC 1.1.1.36 is defined more generally as (R)-3-hydroxyacyl-CoA + NADP+ = 3-oxoacyl-CoA + NADPH. Members of this family may act in the biosynthesis of poly-beta-hydroxybutyrate (e.g. Rhizobium meliloti) and related poly-beta-hydroxyalkanoates. Note that the member of this family from Azospirillum brasilense, designated NodG, appears to lack acetoacetyl-CoA reductase activity and to act instead in the production of nodulation factor. This family is downgraded to subfamily for this NodG. Other proteins designated NodG, as from Rhizobium, belong to related but distinct protein families. Length = 242

>gnl|CDD|181198 PRK08017, PRK08017, oxidoreductase; Provisional

 Score = 67.4 bits (165), Expect = 2e-13
 Identities = 59/191 (30%), Positives = 88/191 (46%), Gaps = 11/191 (5%)

Query: 48  KVVIITGASSGIGEHLAYEYARRGAC-LALCARREKSLEEVADTAREIGSPDVITIRADV 106
           K V+ITG SSGIG   A E  RRG   LA C R+   +  +      +G   ++    D 
Sbjct: 3   KSVLITGCSSGIGLEAALELKRRGYRVLAAC-RKPDDVARM----NSLGFTGILLDLDDP 57

Query: 107 SKVDDCRSLVEETMNHFGRLDHLVNNAGISSVALFEDIVNITDFKQIMNINFWGSVYTTR 166
             V+     V    +   RL  L NNAG         I      +Q  + NF+G+   T 
Sbjct: 58  ESVERAADEVIALTD--NRLYGLFNNAGFGVYGPLSTISR-QQMEQQFSTNFFGTHQLTM 114

Query: 167 FAVPHLR-YTKGKIVVLSSAASWLTAPRMSFYNASKAALVLFFETLRVEL-GSDVGVTIV 224
             +P +  + +G+IV+ SS    ++ P    Y ASK AL  + + LR+EL  S + V+++
Sbjct: 115 LLLPAMLPHGEGRIVMTSSVMGLISTPGRGAYAASKYALEAWSDALRMELRHSGIKVSLI 174

Query: 225 TPGFIESELTQ 235
            PG I +  T 
Sbjct: 175 EPGPIRTRFTD 185

Length = 256

>gnl|CDD|235527 PRK05599, PRK05599, hypothetical protein; Provisional

 Score = 66.8 bits (163), Expect = 3e-13
 Identities = 53/200 (26%), Positives = 82/200 (41%), Gaps = 25/200 (12%)

Query: 50  VIITGASSGIGEHLAYEYARRGAC---LALCARREKSLEEVADTAREIGSPDVITIRADV 106
           ++I G +S I      E A        + L ARR ++ + +A   R+ G+  V  +  D 
Sbjct: 3   ILILGGTSDIAG----EIATLLCHGEDVVLAARRPEAAQGLASDLRQRGATSVHVLSFDA 58

Query: 107 SKVDDCRSLVEETMNHFGRLDHLVNNAGI--------SSVALFEDIVNITDFKQIMNINF 158
             +D  R LV++T    G +   V   GI        +  A   +I  +    Q+     
Sbjct: 59  QDLDTHRELVKQTQELAGEISLAVVAFGILGDQERAETDEAHAVEIATVDYTAQV----- 113

Query: 159 WGSVYTTRFAVPHLRYTKGKIVVLSSAASWLTAPRMSF-YNASKAALVLFFETLRVEL-G 216
             S+ T        +     IV  SS A W  A R ++ Y ++KA L  F + L   L G
Sbjct: 114 --SMLTVLADELRAQTAPAAIVAFSSIAGW-RARRANYVYGSTKAGLDAFCQGLADSLHG 170

Query: 217 SDVGVTIVTPGFIESELTQG 236
           S V + I  PGF+   +T G
Sbjct: 171 SHVRLIIARPGFVIGSMTTG 190

Length = 246

>gnl|CDD|169390 PRK08340, PRK08340, glucose-1-dehydrogenase; Provisional

 Score = 66.8 bits (163), Expect = 4e-13
 Identities = 45/159 (28%), Positives = 81/159 (50%), Gaps = 5/159 (3%)

Query: 50  VIITGASSGIGEHLAYEYARRGACLALCARREKSLEEVADTAREIGSPDVITIRADVSKV 109
           V++T +S GIG ++A E  ++GA + + +R E++LE+     +E G  +V  ++AD+S  
Sbjct: 3   VLVTASSRGIGFNVARELLKKGARVVISSRNEENLEKALKELKEYG--EVYAVKADLSDK 60

Query: 110 DDCRSLVEETMNHFGRLDHLVNNAG-ISSVALFEDIVNITDFKQIMNINFWGSVYTTRFA 168
           DD ++LV+E     G +D LV NAG +            +D+ +   ++     Y T   
Sbjct: 61  DDLKNLVKEAWELLGGIDALVWNAGNVRCEPCMLHEAGYSDWLEAALLHLVAPGYLTTLL 120

Query: 169 VPHL--RYTKGKIVVLSSAASWLTAPRMSFYNASKAALV 205
           +     +  KG +V LSS +     P +   + ++A LV
Sbjct: 121 IQAWLEKKMKGVLVYLSSVSVKEPMPPLVLADVTRAGLV 159

Length = 259

>gnl|CDD|183773 PRK12824, PRK12824, acetoacetyl-CoA reductase; Provisional

 Score = 65.6 bits (160), Expect = 7e-13
 Identities = 43/190 (22%), Positives = 81/190 (42%), Gaps = 3/190 (1%)

Query: 48  KVVIITGASSGIGEHLAYEYARRGACLALCARREKSLEEVADTAREIGSPDVITIRADVS 107
           K+ ++TGA  GIG  +A E    G  +           +            V     DV+
Sbjct: 3   KIALVTGAKRGIGSAIARELLNDGYRVIATYFSGNDCAKDWFEEYGFTEDQVRLKELDVT 62

Query: 108 KVDDCRSLVEETMNHFGRLDHLVNNAGISSVALFEDIVNITDFKQIMNINFWGSVYTTRF 167
             ++C   + E     G +D LVNNAGI+  ++F+  ++  ++  ++N N       T+ 
Sbjct: 63  DTEECAEALAEIEEEEGPVDILVNNAGITRDSVFKR-MSHQEWNDVINTNLNSVFNVTQP 121

Query: 168 AVPHLRYTK-GKIVVLSSAASWLTAPRMSFYNASKAALVLFFETLRVELG-SDVGVTIVT 225
               +     G+I+ +SS          + Y+A+KA ++ F + L  E     + V  + 
Sbjct: 122 LFAAMCEQGYGRIINISSVNGLKGQFGQTNYSAAKAGMIGFTKALASEGARYGITVNCIA 181

Query: 226 PGFIESELTQ 235
           PG+I + + +
Sbjct: 182 PGYIATPMVE 191

Length = 245

>gnl|CDD|187635 cd08930, SDR_c8, classical (c) SDR, subgroup 8

 Score = 65.4 bits (160), Expect = 8e-13
 Identities = 34/142 (23%), Positives = 66/142 (46%), Gaps = 3/142 (2%)

Query: 46  SGKVVIITGASSGIGEHLAYEYARRGACLALCARREKSLEEVADTAREIGSPDVITIRAD 105
             K+++ITGA+  IG+         GA L L      +LE++ +    +    VI +  D
Sbjct: 1   EDKIILITGAAGLIGKAFCKALLSAGARLILADINAPALEQLKEELTNLYKNRVIALELD 60

Query: 106 VSKVDDCRSLVEETMNHFGRLDHLVNNAGISSVALFEDIVNIT--DFKQIMNINFWGSVY 163
           ++  +  + L+E  +  FGR+D L+NNA  S               + +++N+N  G+  
Sbjct: 61  ITSKESIKELIESYLEKFGRIDILINNAYPSPKVWGSRFEEFPYEQWNEVLNVNLGGAFL 120

Query: 164 TTRFAVPH-LRYTKGKIVVLSS 184
            ++  +    +  KG I+ ++S
Sbjct: 121 CSQAFIKLFKKQGKGSIINIAS 142

This subgroup has a fairly well conserved active site tetrad and domain size of the classical SDRs, but has an atypical NAD-binding motif ([ST]G[GA]XGXXG). SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold (alpha/beta folding pattern with a central beta-sheet), an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Classical SDRs are typically about 250 residues long, while extended SDRs are approximately 350 residues. Sequence identity between different SDR enzymes are typically in the 15-30% range, but the enzymes share the Rossmann fold NAD-binding motif and characteristic NAD-binding and catalytic sequence patterns. These enzymes catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase (15-PGDH) numbering). In addition to the Tyr and Lys, there is often an upstream Ser (Ser-138, 15-PGDH numbering) and/or an Asn (Asn-107, 15-PGDH numbering) contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. Extended SDRs have additional elements in the C-terminal region, and typically have a TGXXGXXG cofactor binding motif. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid synthase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type ketoacyl reductases have a TGXXXGX(1-2)G NAD(P)-binding motif. Some atypical SDRs have lost catalytic activity and/or have an unusual NAD(P)-binding motif and missing or unusual active site residues. Reactions catalyzed within the SDR family include isomerization, decarboxylation, epimerization, C=N bond reduction, dehydratase activity, dehalogenation, Enoyl-CoA reduction, and carbonyl-alcohol oxidoreduction. Length = 250

>gnl|CDD|166421 PLN02780, PLN02780, ketoreductase/ oxidoreductase

 Score = 65.7 bits (160), Expect = 1e-12
 Identities = 61/235 (25%), Positives = 115/235 (48%), Gaps = 23/235 (9%)

Query: 15  FTLFSLCLFLPPFLCYKFLLSVFNSIF------SEDVS--GKVVIITGASSGIGEHLAYE 66
           F L SL +        KF  ++ N ++      ++++   G   ++TG + GIG+  A++
Sbjct: 20  FVLGSLSIL-------KFFFTILNWVYVYFLRPAKNLKKYGSWALVTGPTDGIGKGFAFQ 72

Query: 67  YARRGACLALCARREKSLEEVADTAR-EIGSPDVITIRADVS-KVDDCRSLVEETMNHFG 124
            AR+G  L L AR    L++V+D+ + +     + T+  D S  +D+    ++ET+    
Sbjct: 73  LARKGLNLVLVARNPDKLKDVSDSIQSKYSKTQIKTVVVDFSGDIDEGVKRIKETIEGLD 132

Query: 125 RLDHLVNNAGIS-SVALFEDIVNITDFKQIMNINFWGSVYTTRFAVPH-LRYTKGKIVVL 182
            +  L+NN G+S   A F   V+    K ++ +N  G+   T+  +P  L+  KG I+ +
Sbjct: 133 -VGVLINNVGVSYPYARFFHEVDEELLKNLIKVNVEGTTKVTQAVLPGMLKRKKGAIINI 191

Query: 183 SSAASWL--TAPRMSFYNASKAALVLFFETLRVEL-GSDVGVTIVTPGFIESELT 234
            S A+ +  + P  + Y A+KA +  F   L VE   S + V    P ++ +++ 
Sbjct: 192 GSGAAIVIPSDPLYAVYAATKAYIDQFSRCLYVEYKKSGIDVQCQVPLYVATKMA 246

Length = 320

>gnl|CDD|180371 PRK06057, PRK06057, short chain dehydrogenase; Provisional

 Score = 65.1 bits (159), Expect = 1e-12
 Identities = 58/210 (27%), Positives = 98/210 (46%), Gaps = 28/210 (13%)

Query: 42  SEDVSGKVVIITGASSGIGEHLAYEYARRGACLALCARREKSLEEVADTAREIGSPDVIT 101
           S+ ++G+V +ITG  SGIG   A   A  GA + +     ++ +  AD   E+G    + 
Sbjct: 2   SQRLAGRVAVITGGGSGIGLATARRLAAEGATVVVGDIDPEAGKAAAD---EVG---GLF 55

Query: 102 IRADVSKVDDCRSLVEETMNHFGRLDHLVNNAGISSVALFEDIVNITD---FKQIMNINF 158
           +  DV+  D   +L +     +G +D   NNAGIS     +D +  T    ++++ ++N 
Sbjct: 56  VPTDVTDEDAVNALFDTAAETYGSVDIAFNNAGISPPE--DDSILNTGLDAWQRVQDVNL 113

Query: 159 WGSVY-TTRFAVPHLRYT-KGKIV-------VLSSAASWLTAPRMSFYNASKAALVLFFE 209
             SVY   + A+PH+    KG I+       V+ SA S ++      Y ASK  ++    
Sbjct: 114 -TSVYLCCKAALPHMVRQGKGSIINTASFVAVMGSATSQIS------YTASKGGVLAMSR 166

Query: 210 TLRVELGSD-VGVTIVTPGFIESELTQGKF 238
            L V+     + V  + PG + + L Q  F
Sbjct: 167 ELGVQFARQGIRVNALCPGPVNTPLLQELF 196

Length = 255

>gnl|CDD|214833 smart00822, PKS_KR, This enzymatic domain is part of bacterial polyketide synthases

 Score = 63.7 bits (156), Expect = 1e-12
 Identities = 37/165 (22%), Positives = 59/165 (35%), Gaps = 17/165 (10%)

Query: 48  KVVIITGASSGIGEHLAYEYARRGAC-LALCARREKSLEEVADTAREIGS--PDVITIRA 104
              +ITG   G+G  LA   A RGA  L L +R        A    E+ +    V  +  
Sbjct: 1   GTYLITGGLGGLGRALARWLAERGARRLVLLSRSGPDAPGAAALLAELEAAGARVTVVAC 60

Query: 105 DVSKVDDCRSLVEETMNHFGRLDHLVNNAGISSVALFEDIVNITDFKQIMNINFWGSVYT 164
           DV+  D   +++       G L  +++ AG+    +   +     F  +           
Sbjct: 61  DVADRDALAAVLAAIPAVEGPLTGVIHAAGVLDDGVLASL-TPERFAAV----LAPKAAG 115

Query: 165 TRFAVPHL-RYTKGK----IVVLSSAASWLTAPRMSFYNASKAAL 204
                 +L   T        V+ SS A  L +P  + Y A+ A L
Sbjct: 116 AW----NLHELTADLPLDFFVLFSSIAGVLGSPGQANYAAANAFL 156

It catalyses the first step in the reductive modification of the beta-carbonyl centres in the growing polyketide chain. It uses NADPH to reduce the keto group to a hydroxy group. Length = 180

>gnl|CDD|236099 PRK07791, PRK07791, short chain dehydrogenase; Provisional

 Score = 65.5 bits (160), Expect = 2e-12
 Identities = 50/177 (28%), Positives = 77/177 (43%), Gaps = 22/177 (12%)

Query: 47  GKVVIITGASSGIGEHLAYEYARRGA---------CLALCARREKSLEEVADTAREIGSP 97
           G+VVI+TGA  GIG   A  +A  GA          L   A    + + V D     G  
Sbjct: 6   GRVVIVTGAGGGIGRAHALAFAAEGARVVVNDIGVGLDGSASGGSAAQAVVDEIVAAGGE 65

Query: 98  DVITIRADVSKVDDCRSLVEETMNHFGRLDHLVNNAGISSVALFEDIVNIT--DFKQIMN 155
            V     D++  D   +LV+  +  FG LD LVNNAGI    +     N++  ++  ++ 
Sbjct: 66  AVAN-GDDIADWDGAANLVDAAVETFGGLDVLVNNAGILRDRMI---ANMSEEEWDAVIA 121

Query: 156 INFWGSVYTTRFAVPHLR-YTK------GKIVVLSSAASWLTAPRMSFYNASKAALV 205
           ++  G   T R A  + R  +K       +I+  SS A    +     Y+A+KA + 
Sbjct: 122 VHLKGHFATLRHAAAYWRAESKAGRAVDARIINTSSGAGLQGSVGQGNYSAAKAGIA 178

Length = 286

>gnl|CDD|169556 PRK08703, PRK08703, short chain dehydrogenase; Provisional

 Score = 64.2 bits (156), Expect = 2e-12
 Identities = 51/167 (30%), Positives = 78/167 (46%), Gaps = 10/167 (5%)

Query: 45  VSGKVVIITGASSGIGEHLAYEYARRGACLALCARREKSLEEVADTAREIGSPDVITIRA 104
           +S K +++TGAS G+GE +A  YA  GA + L AR +K LE+V D   E G P+   IR 
Sbjct: 4   LSDKTILVTGASQGLGEQVAKAYAAAGATVILVARHQKKLEKVYDAIVEAGHPEPFAIRF 63

Query: 105 DVSKVDD------CRSLVEETMNHFGRLDHLVNNAGISSVALFEDIVNITDFKQIMNINF 158
           D+   ++        ++ E T    G+LD +V+ AG        D   + ++     IN 
Sbjct: 64  DLMSAEEKEFEQFAATIAEATQ---GKLDGIVHCAGYFYALSPLDFQTVAEWVNQYRINT 120

Query: 159 WGSVYTTRFAVPHLRYTKGKIVVLSSAASWLT-APRMSFYNASKAAL 204
              +  TR   P L+ +    V+    +   T       + ASKAAL
Sbjct: 121 VAPMGLTRALFPLLKQSPDASVIFVGESHGETPKAYWGGFGASKAAL 167

Length = 239

>gnl|CDD|219957 pfam08659, KR, KR domain

 Score = 62.2 bits (152), Expect = 5e-12
 Identities = 43/164 (26%), Positives = 70/164 (42%), Gaps = 17/164 (10%)

Query: 49  VVIITGASSGIGEHLAYEYARRGA-CLALCARREKSLEEVADTAREIGSP--DVITIRAD 105
             ++TG   G+G  LA   A RGA  L L +R      E      E+ +   +V  +  D
Sbjct: 2   TYLVTGGLGGLGLELARWLAERGARHLVLLSRSGAPDPEAEALLAELEARGAEVTVVACD 61

Query: 106 VSKVDDCRSLVEETMNHFGRLDHLVNNAGISSVALFEDIVNITDFKQIMNINFWGSVYTT 165
           VS  D  R+L+ E       L  +++ AG+   AL  + +   DF +++     G+    
Sbjct: 62  VSDRDAVRALLAEIRADGPPLRGVIHAAGVLRDALLAN-MTAEDFARVLAPKVTGAW--- 117

Query: 166 RFAVPHL-RYTKGK----IVVLSSAASWLTAPRMSFYNASKAAL 204
                +L   T+ +     V+ SS A  L +P  + Y A+ A L
Sbjct: 118 -----NLHEATRDRPLDFFVLFSSIAGVLGSPGQANYAAANAFL 156

This enzymatic domain is part of bacterial polyketide synthases and catalyzes the first step in the reductive modification of the beta-carbonyl centres in the growing polyketide chain. It uses NADPH to reduce the keto group to a hydroxy group. Length = 181

>gnl|CDD|187663 cd09762, HSDL2_SDR_c, human hydroxysteroid dehydrogenase-like protein 2 (HSDL2), classical (c) SDRs

 Score = 63.2 bits (154), Expect = 6e-12
 Identities = 51/177 (28%), Positives = 83/177 (46%), Gaps = 23/177 (12%)

Query: 46  SGKVVIITGASSGIGEHLAYEYARRGACLALCAR----REKSLEEVADTAREI------G 95
           +GK + ITGAS GIG+ +A + AR GA + + A+      K    +   A EI       
Sbjct: 2   AGKTLFITGASRGIGKAIALKAARDGANVVIAAKTAEPHPKLPGTIYTAAEEIEAAGGKA 61

Query: 96  SPDVITIRADVSKVDDCRSLVEETMNHFGRLDHLVNNAGISSVALFEDIVNITDFKQIMN 155
            P ++ IR +    D  R+ VE+ +  FG +D LVNNA   S+    D   +  +  +M 
Sbjct: 62  LPCIVDIRDE----DQVRAAVEKAVEKFGGIDILVNNASAISLTGTLD-TPMKRYDLMMG 116

Query: 156 INFWGSVYTTRFAVPHLRYTKGKIVV-----LSSAASWL---TAPRMSFYNASKAAL 204
           +N  G+   ++  +P+L+ +K   ++     L+    W    TA  M+ Y  S   L
Sbjct: 117 VNTRGTYLCSKACLPYLKKSKNPHILNLSPPLNLNPKWFKNHTAYTMAKYGMSMCVL 173

This subgroup includes human HSDL2 and related protens. These are members of the classical SDR family, with a canonical Gly-rich NAD-binding motif and the typical YXXXK active site motif. However, the rest of the catalytic tetrad is not strongly conserved. HSDL2 may play a part in fatty acid metabolism, as it is found in peroxisomes. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold (alpha/beta folding pattern with a central beta-sheet), an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Classical SDRs are typically about 250 residues long, while extended SDRS are approximately 350 residues. Sequence identity between different SDR enzymes are typically in the 15-30% range, but the enzymes share the Rossmann fold NAD-binding motif and characteristic NAD-binding and catalytic sequence patterns. These enzymes have a 3-glycine N-terminal NAD(P)(H)-binding pattern (typically, TGxxxGxG in classical SDRs and TGxxGxxG in extended SDRs), while substrate binding is in the C-terminal region. A critical catalytic Tyr residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase (15-PGDH) numbering), is often found in a conserved YXXXK pattern. In addition to the Tyr and Lys, there is often an upstream Ser (Ser-138, 15-PGDH numbering) and/or an Asn (Asn-107, 15-PGDH numbering) or additional Ser, contributing to the active site. Substrates for these enzymes include sugars, steroids, alcohols, and aromatic compounds. The standard reaction mechanism is a proton relay involving the conserved Tyr and Lys, as well as Asn (or Ser). Some SDR family members, including 17 beta-hydroxysteroid dehydrogenase contain an additional helix-turn-helix motif that is not generally found among SDRs. Length = 243

>gnl|CDD|180838 PRK07102, PRK07102, short chain dehydrogenase; Provisional

 Score = 62.6 bits (153), Expect = 8e-12
 Identities = 60/211 (28%), Positives = 78/211 (36%), Gaps = 44/211 (20%)

Query: 47  GKVVIITGASSGIGEHLAYEYARRGACLALCARREKSLEEVADTAREIGSPDVITIRADV 106
            K ++I GA+S I    A  YA  GA L L AR  + LE +AD  R  G+  V T   D+
Sbjct: 1   MKKILIIGATSDIARACARRYAAAGARLYLAARDVERLERLADDLRARGAVAVSTHELDI 60

Query: 107 SKVDDCRSLVEETMNHFGRLDHLVNNAGISSVALFEDIVNI------------TDF---K 151
                                  +++      AL  DIV I             D     
Sbjct: 61  --------------LDTASHAAFLDSLP----ALP-DIVLIAVGTLGDQAACEADPALAL 101

Query: 152 QIMNINFWGSV-----YTTRFAVPHLRYTKGKIVVLSSAASWLTAPRMSFYNASKAALVL 206
           +    NF G +        RF         G IV +SS A          Y ++KAAL  
Sbjct: 102 REFRTNFEGPIALLTLLANRFEARG----SGTIVGISSVAGDRGRASNYVYGSAKAALTA 157

Query: 207 FFETLRVELG-SDVGVTIVTPGFIESELTQG 236
           F   LR  L  S V V  V PGF+ + +T G
Sbjct: 158 FLSGLRNRLFKSGVHVLTVKPGFVRTPMTAG 188

Length = 243

>gnl|CDD|181044 PRK07577, PRK07577, short chain dehydrogenase; Provisional

 Score = 61.7 bits (150), Expect = 2e-11
 Identities = 57/207 (27%), Positives = 96/207 (46%), Gaps = 25/207 (12%)

Query: 46  SGKVVIITGASSGIGEHLAYEYARRGACLALCARREKSLEEVADTAREIGSPDVITIRAD 105
           S + V++TGA+ GIG  L+   A  G  +   AR       + D   E+ + D+    AD
Sbjct: 2   SSRTVLVTGATKGIGLALSLRLANLGHQVIGIARS-----AIDDFPGELFACDL----AD 52

Query: 106 VSKVDDC-RSLVEETMNHFGRLDHLVNNAGISSVALFEDIVNITDFKQIMNINFWGSVYT 164
           + +       + E        +D +VNN GI+       I ++   + + ++N   +V  
Sbjct: 53  IEQTAATLAQINEI-----HPVDAIVNNVGIALPQPLGKI-DLAALQDVYDLNVRAAVQV 106

Query: 165 TRFAVPHLRYTK-GKIVVLSSAASWLTAPRMSFYNASKAALVLFFETLRVELGSDVGVTI 223
           T+  +  ++  + G+IV + S A +    R S Y+A+K+ALV    T  +EL    G+T+
Sbjct: 107 TQAFLEGMKLREQGRIVNICSRAIFGALDRTS-YSAAKSALVGCTRTWALELAE-YGITV 164

Query: 224 --VTPGFIESELTQGKFLTGRRQNSDR 248
             V PG IE+EL    F   R   S+ 
Sbjct: 165 NAVAPGPIETEL----FRQTRPVGSEE 187

Length = 234

>gnl|CDD|181126 PRK07806, PRK07806, short chain dehydrogenase; Provisional

 Score = 61.7 bits (150), Expect = 2e-11
 Identities = 27/91 (29%), Positives = 42/91 (46%), Gaps = 2/91 (2%)

Query: 44  DVSGKVVIITGASSGIGEHLAYEYARRGACLALCAR-REKSLEEVADTAREIGSPDVITI 102
           D+ GK  ++TG+S GIG   A   A  GA + +  R +     +V       G      +
Sbjct: 3   DLPGKTALVTGSSRGIGADTAKILAGAGAHVVVNYRQKAPRANKVVAEIEAAGG-RASAV 61

Query: 103 RADVSKVDDCRSLVEETMNHFGRLDHLVNNA 133
            AD++  +   +L++     FG LD LV NA
Sbjct: 62  GADLTDEESVAALMDTAREEFGGLDALVLNA 92

Length = 248

>gnl|CDD|235737 PRK06197, PRK06197, short chain dehydrogenase; Provisional

 Score = 61.6 bits (150), Expect = 3e-11
 Identities = 54/209 (25%), Positives = 83/209 (39%), Gaps = 21/209 (10%)

Query: 44  DVSGKVVIITGASSGIGEHLAYEYARRGACLALCARR-EKSLEEVADTAREIGSPDVITI 102
           D SG+V ++TGA++G+G   A   A +GA + L  R  +K     A         DV   
Sbjct: 13  DQSGRVAVVTGANTGLGYETAAALAAKGAHVVLAVRNLDKGKAAAARITAATPGADVTLQ 72

Query: 103 RADVSKVDDCRSLVEETMNHFGRLDHLVNNAGISSVALFEDIVNITDFKQIMNINFWGSV 162
             D++ +   R+  +     + R+D L+NNAG   V           F+     N  G  
Sbjct: 73  ELDLTSLASVRAAADALRAAYPRIDLLINNAG---VMYTPKQTTADGFELQFGTNHLGHF 129

Query: 163 YTTRFAVPHLRYTKG-KIVVLSSAASWLTAP-------------RMSFYNASKAALVLFF 208
             T   +  L    G ++V +SS    + A              R++ Y  SK A +LF 
Sbjct: 130 ALTGLLLDRLLPVPGSRVVTVSSGGHRIRAAIHFDDLQWERRYNRVAAYGQSKLANLLFT 189

Query: 209 ETLRVELGSDVGVTIVT---PGFIESELT 234
             L+  L +    TI     PG   +EL 
Sbjct: 190 YELQRRLAAAGATTIAVAAHPGVSNTELA 218

Length = 306

>gnl|CDD|187595 cd05334, DHPR_SDR_c_like, dihydropteridine reductase (DHPR), classical (c) SDRs

 Score = 60.4 bits (147), Expect = 4e-11
 Identities = 44/187 (23%), Positives = 72/187 (38%), Gaps = 27/187 (14%)

Query: 47  GKVVIITGASSGIGEHLAYEYARRGACLALCARREKSLEEVADTAREIGSPDVITIRADV 106
            +VV++ G    +G  +   +  RG  +A     E    E AD A        I +    
Sbjct: 1   ARVVLVYGGRGALGSAVVQAFKSRGWWVASIDLAEN---EEAD-AS-------IIVLDSD 49

Query: 107 SKVDDCRSLVEETMNHFGRLDHLVNNAG------ISSVALFEDIVNITDFKQIMNINFWG 160
           S  +  + +V       G++D L+  AG        S +  +      ++  +   N W 
Sbjct: 50  SFTEQAKQVVASVARLSGKVDALICVAGGWAGGSAKSKSFVK------NWDLMWKQNLWT 103

Query: 161 SVYTTRFAVPHLRYTKGKIVVLSSAASWLTA-PRMSFYNASKAALVLFFETLRVEL-GSD 218
           S   +  A  HL    G ++VL+ A + L   P M  Y A+KAA+    ++L  E  G  
Sbjct: 104 SFIASHLATKHLL--SGGLLVLTGAKAALEPTPGMIGYGAAKAAVHQLTQSLAAENSGLP 161

Query: 219 VGVTIVT 225
            G T   
Sbjct: 162 AGSTANA 168

Dihydropteridine reductase is an NAD-binding protein related to the SDRs. It converts dihydrobiopterin into tetrahydrobiopterin, a cofactor necessary in catecholamines synthesis. Dihydropteridine reductase has the YXXXK of these tyrosine-dependent oxidoreductases, but lacks the typical upstream Asn and Ser catalytic residues. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold (alpha/beta folding pattern with a central beta-sheet), an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Classical SDRs are typically about 250 residues long, while extended SDRS are approximately 350 residues. Sequence identity between different SDR enzymes are typically in the 15-30% range, but the enzymes share the Rossmann fold NAD-binding motif and characteristic NAD-binding and catalytic sequence patterns. These enzymes have a 3-glycine N-terminal NAD(P)(H)-binding pattern (typically, TGxxxGxG in classical SDRs and TGxxGxxG in extended SDRs), while substrate binding is in the C-terminal region. A critical catalytic Tyr residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase (15-PGDH) numbering), is often found in a conserved YXXXK pattern. In addition to the Tyr and Lys, there is often an upstream Ser (Ser-138, 15-PGDH numbering) and/or an Asn (Asn-107, 15-PGDH numbering) or additional Ser, contributing to the active site. Substrates for these enzymes include sugars, steroids, alcohols, and aromatic compounds. The standard reaction mechanism is a proton relay involving the conserved Tyr and Lys, as well as Asn (or Ser). Some SDR family members, including 17 beta-hydroxysteroid dehydrogenase contain an additional helix-turn-helix motif that is not generally found among SDRs. Length = 221

>gnl|CDD|181762 PRK09291, PRK09291, short chain dehydrogenase; Provisional

 Score = 60.8 bits (148), Expect = 5e-11
 Identities = 55/203 (27%), Positives = 83/203 (40%), Gaps = 31/203 (15%)

Query: 47  GKVVIITGASSGIGEHLAYEYARRGACLALCARREKSLEEVADTAREIGSPDVITIRADV 106
            K ++ITGA SG G  +A   AR+G  +    +    +  +   A   G      +   V
Sbjct: 2   SKTILITGAGSGFGREVALRLARKGHNVIAGVQIAPQVTALRAEAARRG------LALRV 55

Query: 107 SKVDDCRSLVEETMNHFGRLDH--LVNNAGIS-SVALFE---DIVNITDFKQIMNINFWG 160
            K+D                D   L+NNAGI  + A+ +   ++V     +++   N +G
Sbjct: 56  EKLD---LTDAIDRAQAAEWDVDVLLNNAGIGEAGAVVDIPVELV-----RELFETNVFG 107

Query: 161 SVYTTRFAVPH-LRYTKGKIVVLSSAASWLTAPRMSFYNASKAALVLFFETLRVELGS-D 218
            +  T+  V   +   KGK+V  SS A  +T P    Y ASK AL    E +  EL    
Sbjct: 108 PLELTQGFVRKMVARGKGKVVFTSSMAGLITGPFTGAYCASKHALEAIAEAMHAELKPFG 167

Query: 219 VGVTIVTPGFIESELTQGKFLTG 241
           + V  V PG          +LTG
Sbjct: 168 IQVATVNPGP---------YLTG 181

Length = 257

>gnl|CDD|180617 PRK06550, fabG, 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional

 Score = 60.0 bits (146), Expect = 7e-11
 Identities = 53/203 (26%), Positives = 92/203 (45%), Gaps = 22/203 (10%)

Query: 43  EDVSGKVVIITGASSGIGEHLAYEYARRGACLALCARREKSLEEVADTAREIGSPDVITI 102
           ++   K V+ITGA+SGIG   A  +  +GA +    +++K             S +   +
Sbjct: 1   QEFMTKTVLITGAASGIGLAQARAFLAQGAQVYGVDKQDKPDL----------SGNFHFL 50

Query: 103 RADVSKVDDCRSLVEETMNHFGRLDHLVNNAGI-SSVALFEDIVNITDFKQIMNINFWGS 161
           + D+S  DD   L +        +D L N AGI        D  ++ +++ I + N   +
Sbjct: 51  QLDLS--DDLEPLFDW----VPSVDILCNTAGILDDYKPLLDT-SLEEWQHIFDTNLTST 103

Query: 162 VYTTRFAVPH-LRYTKGKIVVLSSAASWLTAPRMSFYNASKAALVLFFETLRVELGSDVG 220
              TR  +P  L    G I+ + S AS++     + Y ASK AL  F + L ++   D G
Sbjct: 104 FLLTRAYLPQMLERKSGIIINMCSIASFVAGGGGAAYTASKHALAGFTKQLALDYAKD-G 162

Query: 221 VTI--VTPGFIESELTQGKFLTG 241
           + +  + PG +++ +T   F  G
Sbjct: 163 IQVFGIAPGAVKTPMTAADFEPG 185

Length = 235

>gnl|CDD|130890 TIGR01831, fabG_rel, 3-oxoacyl-(acyl-carrier-protein) reductase, putative

 Score = 59.9 bits (145), Expect = 8e-11
 Identities = 51/189 (26%), Positives = 90/189 (47%), Gaps = 8/189 (4%)

Query: 50  VIITGASSGIGEHLAYEYARRGACLALCARREKS-LEEVADTAREIGSPDVITIRADVSK 108
           V++TGAS GIG  +A   A  G  + +     +S  E V    +  G  +   ++ DV+ 
Sbjct: 1   VLVTGASRGIGRAIANRLAADGFEICVHYHSGRSDAESVVSAIQAQGG-NARLLQFDVAD 59

Query: 109 VDDCRSLVEETMNHFGRLDHLVNNAGISSVALFEDIVNITDFKQIMNIN---FWGSVYTT 165
              CR+L+E  +   G    +V NAGI+  A F  +    D+  +++ N   F+  ++  
Sbjct: 60  RVACRTLLEADIAEHGAYYGVVLNAGITRDAAFPALSE-EDWDIVIHTNLDGFYNVIHPC 118

Query: 166 RFAVPHLRYTKGKIVVLSSAASWLTAPRMSFYNASKAALVLFFETLRVELGS-DVGVTIV 224
              +   R   G+I+ L+S +  +       Y+A+KA L+   + L VEL    + V  +
Sbjct: 119 TMPMIRAR-QGGRIITLASVSGVMGNRGQVNYSAAKAGLIGATKALAVELAKRKITVNCI 177

Query: 225 TPGFIESEL 233
            PG I++E+
Sbjct: 178 APGLIDTEM 186

This model represents a small, very well conserved family of proteins closely related to the FabG family, TIGR01830, and possibly equal in function. In all completed genomes with a member of this family, a FabG in TIGR01830 is also found [Fatty acid and phospholipid metabolism, Biosynthesis]. Length = 239

>gnl|CDD|180823 PRK07074, PRK07074, short chain dehydrogenase; Provisional

 Score = 59.8 bits (145), Expect = 1e-10
 Identities = 39/183 (21%), Positives = 75/183 (40%), Gaps = 9/183 (4%)

Query: 48  KVVIITGASSGIGEHLAYEYARRGACLALCARREKSLEEVADTAREIGSPDVITIRADVS 107
           +  ++TGA+ GIG+ LA  +   G  +        +L   A     +G    + +  D++
Sbjct: 3   RTALVTGAAGGIGQALARRFLAAGDRVLALDIDAAALAAFA---DALGDARFVPVACDLT 59

Query: 108 KVDDCRSLVEETMNHFGRLDHLVNNAGIS-SVALFEDIVNITDFKQIMNINFWGSVYTTR 166
                 + +       G +D LV NAG + + +L +       ++    +N   +     
Sbjct: 60  DAASLAAALANAAAERGPVDVLVANAGAARAASLHDTTPAS--WRADNALNLEAAYLCVE 117

Query: 167 -FAVPHLRYTKGKIVVLSSAASWLTAPRMSFYNASKAALVLFFETLRVELGSD-VGVTIV 224
                 L+ ++G +V + S    + A     Y+A+KA L+ + + L VE G   +    V
Sbjct: 118 AVLEGMLKRSRGAVVNIGSVNG-MAALGHPAYSAAKAGLIHYTKLLAVEYGRFGIRANAV 176

Query: 225 TPG 227
            PG
Sbjct: 177 APG 179

Length = 257

>gnl|CDD|212497 cd11731, Lin1944_like_SDR_c, Lin1944 and related proteins, classical (c) SDRs

 Score = 58.4 bits (142), Expect = 1e-10
 Identities = 45/193 (23%), Positives = 75/193 (38%), Gaps = 25/193 (12%)

Query: 50  VIITGASSGIGEHLAYEYARRGACLALCARREKSLEEVADTAREIGSPDVITIRADVSKV 109
           +I+ GA+  IG  +A   +  G              EV    R   S D    + D++  
Sbjct: 1   IIVIGATGTIGLAVAQLLSAHGH-------------EVITAGR--SSGDY---QVDITDE 42

Query: 110 DDCRSLVEETMNHFGRLDHLVNNAGISSVALFEDIVNITDFKQIMNINFWGSVYTTRFAV 169
              ++L E+     G  D +V+ AG +  A   ++    DF++ +N    G +   R  +
Sbjct: 43  ASIKALFEKV----GHFDAIVSTAGDAEFAPLAEL-TDADFQRGLNSKLLGQINLVRHGL 97

Query: 170 PHLRYTKGKIVVLSSAASWLTAPRMSFYNASKAALVLFFETLRVELGSDVGVTIVTPGFI 229
           P+L    G I + S   +    P  +       AL  F     +EL   + +  V+PG +
Sbjct: 98  PYLN-DGGSITLTSGILAQRPIPGGAAAATVNGALEGFVRAAAIELPRGIRINAVSPGVV 156

Query: 230 -ESELTQGKFLTG 241
            ES    G F  G
Sbjct: 157 EESLEAYGDFFPG 169

Lin1944 protein from Listeria Innocua is a classical SDR, it contains a glycine-rich motif similar to the canonical motif of the SDR NAD(P)-binding site. However, the typical SDR active site residues are absent in this subgroup of proteins of undetermined function. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold (alpha/beta folding pattern with a central beta-sheet), an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Classical SDRs are typically about 250 residues long, while extended SDRs are approximately 350 residues. Sequence identity between different SDR enzymes are typically in the 15-30% range, but the enzymes share the Rossmann fold NAD-binding motif and characteristic NAD-binding and catalytic sequence patterns. These enzymes catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, human prostaglandin dehydrogenase (PGDH) numbering). In addition to the Tyr and Lys, there is often an upstream Ser (Ser-138, PGDH numbering) and/or an Asn (Asn-107, PGDH numbering) contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. Extended SDRs have additional elements in the C-terminal region, and typically have a TGXXGXXG cofactor binding motif. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid synthase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type ketoacyl reductases have a TGXXXGX(1-2)G NAD(P)-binding motif. Some atypical SDRs have lost catalytic activity and/or have an unusual NAD(P)-binding motif and missing or unusual active site residues. Reactions catalyzed within the SDR family include isomerization, decarboxylation, epimerization, C=N bond reduction, dehydratase activity, dehalogenation, Enoyl-CoA reduction, and carbonyl-alcohol oxidoreduction. Length = 198

>gnl|CDD|222222 pfam13561, adh_short_C2, Enoyl-(Acyl carrier protein) reductase

 Score = 58.0 bits (141), Expect = 4e-10
 Identities = 39/171 (22%), Positives = 73/171 (42%), Gaps = 12/171 (7%)

Query: 54  GASSGIGEHLAYEYARRGACLAL-CARREKSLEEVADTAREIGSPDVITIRADVSKVDDC 112
              + I   +A   A  GA + L        +  V + A+E+ +     I  DV+  +D 
Sbjct: 3   ADDNSIAWAIAKAAAEEGAEVVLTTWPPALRMGAVDELAKELPAD---VIPLDVTSDEDI 59

Query: 113 RSLVEETMNHFGRLDHLVNNAGISS-VALFEDIVNIT--DFKQIMNINFWGSVYTTRFAV 169
             L E+     G++D LV++  +S  +   +  ++ +   F + ++I+ +  +   + A 
Sbjct: 60  DELFEKVKEDGGKIDFLVHSIAMSPEIRKGKPYLDTSREGFLKALDISAYSFISLAKAAK 119

Query: 170 PHLRYTKGKIVVLSSAASWLTAPRMSFYNASKAALVLFFETLRVELGSDVG 220
           P +    G IV LS  A+    P       +KAAL    E+L   L  ++G
Sbjct: 120 PLMNEG-GSIVALSYIAAERVFPGYGGMGVAKAAL----ESLARYLAYELG 165

Length = 239

>gnl|CDD|187583 cd05322, SDH_SDR_c_like, Sorbitol 6-phosphate dehydrogenase (SDH), classical (c) SDRs

 Score = 57.9 bits (140), Expect = 5e-10
 Identities = 47/195 (24%), Positives = 91/195 (46%), Gaps = 7/195 (3%)

Query: 47  GKVVIITGASSGIGEHLAYEYARRGACLALCARREKSLEEVADTAREIGSPDVITIRADV 106
            +V ++ G    +GE L +  A  G  +A+     ++ E+VAD              AD 
Sbjct: 2   NQVAVVIGGGQTLGEFLCHGLAEAGYDVAVADINSENAEKVADEINAEYGEKAYGFGADA 61

Query: 107 SKVDDCRSLVEETMNHFGRLDHLVNNAGISSVALFEDIVNITDFKQIMNINFWGSVYTTR 166
           +      +L +     F R+D LV +AGI+  A   D   + DF + + +N  G     R
Sbjct: 62  TNEQSVIALSKGVDEIFKRVDLLVYSAGIAKSAKITDF-ELGDFDRSLQVNLVGYFLCAR 120

Query: 167 -FAVPHLRY-TKGKIVVLSSAASWLTAPRMSFYNASKAALVLFFETLRVELGSDVGVTI- 223
            F+   +R   +G+I+ ++S +  + +   S Y+A+K   V   ++L ++L ++ G+T+ 
Sbjct: 121 EFSKLMIRDGIQGRIIQINSKSGKVGSKHNSGYSAAKFGGVGLTQSLALDL-AEHGITVN 179

Query: 224 -VTPG-FIESELTQG 236
            +  G  ++S + Q 
Sbjct: 180 SLMLGNLLKSPMFQS 194

Sorbitol 6-phosphate dehydrogenase (SDH, aka glucitol 6-phosphate dehydrogenase) catalyzes the NAD-dependent interconversion of D-fructose 6-phosphate to D-sorbitol 6-phosphate. SDH is a member of the classical SDRs, with the characteristic catalytic tetrad, but without a complete match to the typical NAD-binding motif. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold (alpha/beta folding pattern with a central beta-sheet), an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Classical SDRs are typically about 250 residues long, while extended SDRs are approximately 350 residues. Sequence identity between different SDR enzymes are typically in the 15-30% range, but the enzymes share the Rossmann fold NAD-binding motif and characteristic NAD-binding and catalytic sequence patterns. These enzymes catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase (15-PGDH) numbering). In addition to the Tyr and Lys, there is often an upstream Ser (Ser-138, 15-PGDH numbering) and/or an Asn (Asn-107, 15-PGDH numbering) contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. Extended SDRs have additional elements in the C-terminal region, and typically have a TGXXGXXG cofactor binding motif. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid synthase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type ketoacyl reductases have a TGXXXGX(1-2)G NAD(P)-binding motif. Some atypical SDRs have lost catalytic activity and/or have an unusual NAD(P)-binding motif and missing or unusual active site residues. Reactions catalyzed within the SDR family include isomerization, decarboxylation, epimerization, C=N bond reduction, dehydratase activity, dehalogenation, Enoyl-CoA reduction, and carbonyl-alcohol oxidoreduction. Length = 257

>gnl|CDD|237189 PRK12748, PRK12748, 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional

 Score = 57.0 bits (138), Expect = 9e-10
 Identities = 53/219 (24%), Positives = 85/219 (38%), Gaps = 25/219 (11%)

Query: 47  GKVVIITGAS--SGIGEHLAYEYARRGACLALCARREKSLEEVADT--------AREIGS 96
            K+ ++TGAS  +GIG  +    A +G  +                          EI S
Sbjct: 5   KKIALVTGASRLNGIGAAVCRRLAAKGIDIFFTYWSPYDKTMPWGMHDKEPVLLKEEIES 64

Query: 97  PDV--ITIRADVSKVDDCRSLVEETMNHFGRLDHLVNNAGISSVALFEDI-VNITDFKQI 153
             V    +  D+S+      +        G    L+NNA  S+    E++     D    
Sbjct: 65  YGVRCEHMEIDLSQPYAPNRVFYAVSERLGDPSILINNAAYSTHTRLEELTAEQLDKHYA 124

Query: 154 MNINFWGSVYTTRFAVPHLRYTKGKIVVLSSAASWLTAPRMSFYNASKAALVLFFETLRV 213
           +N+     + ++ FA  +     G+I+ L+S  S    P    Y A+K A+  F ++L  
Sbjct: 125 VNVRA-TMLLSSAFAKQYDGKAGGRIINLTSGQSLGPMPDELAYAATKGAIEAFTKSLAP 183

Query: 214 ELGSDVGVTI--VTPG-----FIESELTQG---KFLTGR 242
           EL  + G+T+  V PG     +I  EL      KF  GR
Sbjct: 184 ELA-EKGITVNAVNPGPTDTGWITEELKHHLVPKFPQGR 221

Length = 256

>gnl|CDD|180753 PRK06924, PRK06924, short chain dehydrogenase; Provisional

 Score = 56.6 bits (137), Expect = 1e-09
 Identities = 46/176 (26%), Positives = 80/176 (45%), Gaps = 15/176 (8%)

Query: 48  KVVIITGASSGIGEHLAYEYARRGACLALCARREKSLEEVADTAREIGSPDVITIRADVS 107
           + VIITG S G+GE +A +   +G  +   +R E   +E+   A E  + ++     D+ 
Sbjct: 2   RYVIITGTSQGLGEAIANQLLEKGTHVISISRTEN--KELTKLA-EQYNSNLTFHSLDLQ 58

Query: 108 KVDDCRSLVEE-----TMNHFGRLDHLVNNAGISSVALFEDIVNITDFKQIMN--INFWG 160
            V +  +   E       ++   + HL+NNAG+  VA  + I      + I N  +N   
Sbjct: 59  DVHELETNFNEILSSIQEDNVSSI-HLINNAGM--VAPIKPIEKAESEELITNVHLNLLA 115

Query: 161 SVYTTRFAVPHLRYTKGK--IVVLSSAASWLTAPRMSFYNASKAALVLFFETLRVE 214
            +  T   + H +  K    ++ +SS A+       S Y +SKA L +F +T+  E
Sbjct: 116 PMILTSTFMKHTKDWKVDKRVINISSGAAKNPYFGWSAYCSSKAGLDMFTQTVATE 171

Length = 251

>gnl|CDD|236389 PRK09134, PRK09134, short chain dehydrogenase; Provisional

 Score = 56.1 bits (136), Expect = 2e-09
 Identities = 29/98 (29%), Positives = 48/98 (48%), Gaps = 9/98 (9%)

Query: 48  KVVIITGASSGIGEHLAYEYARRGACLALCARREKSLEEVADTAREIGSPDV--ITIRAD 105
           +  ++TGA+  IG  +A + A  G  +A+   R  S +E    A EI +     + ++AD
Sbjct: 10  RAALVTGAARRIGRAIALDLAAHGFDVAVHYNR--SRDEAEALAAEIRALGRRAVALQAD 67

Query: 106 VSKVDDCRSLVEETMNHFGRLDHLVNNAGISSVALFED 143
           ++   + R+LV       G +  LVNNA     +LFE 
Sbjct: 68  LADEAEVRALVARASAALGPITLLVNNA-----SLFEY 100

Length = 258

>gnl|CDD|233441 TIGR01500, sepiapter_red, sepiapterin reductase

 Score = 55.3 bits (133), Expect = 3e-09
 Identities = 53/207 (25%), Positives = 93/207 (44%), Gaps = 25/207 (12%)

Query: 49  VVIITGASSGIGEHLAYEYARR----GACLALCARREKSLEEVADTAREIGS--PD--VI 100
           V ++TGAS G G  +A E A+     G+ L L AR +++L +      EIG+      V+
Sbjct: 2   VCLVTGASRGFGRTIAQELAKCLKSPGSVLVLSARNDEALRQ---LKAEIGAERSGLRVV 58

Query: 101 TIRADVSKVDDCRSL---VEETM--NHFGRLDHLVNNAGISSVALFEDIVNITDFKQIMN 155
            +  D+        L   + E        RL  L+NNAG +   + +  V+++D  Q+ N
Sbjct: 59  RVSLDLGAEAGLEQLLKALRELPRPKGLQRL-LLINNAG-TLGDVSKGFVDLSDSTQVQN 116

Query: 156 ---INFWGSVYTTRFAVPHLRYTKG---KIVVLSSAASWLTAPRMSFYNASKAALVLFFE 209
              +N    +  T   +   + + G    +V +SS  +       + Y A KAA  + F+
Sbjct: 117 YWALNLTSMLCLTSSVLKAFKDSPGLNRTVVNISSLCAIQPFKGWALYCAGKAARDMLFQ 176

Query: 210 TLRVE-LGSDVGVTIVTPGFIESELTQ 235
            L +E    +V V    PG +++++ Q
Sbjct: 177 VLALEEKNPNVRVLNYAPGVLDTDMQQ 203

This model describes sepiapterin reductase, a member of the short chain dehydrogenase/reductase family. The enzyme catalyzes the last step in the biosynthesis of tetrahydrobiopterin. A similar enzyme in Bacillus cereus was isolated for its ability to convert benzil to (S)-benzoin, a property sepiapterin reductase also shares. Cutoff scores for this model are set such that benzil reductase scores between trusted and noise cutoffs. Length = 256

>gnl|CDD|187670 cd09810, LPOR_like_SDR_c_like, light-dependent protochlorophyllide reductase (LPOR)-like, classical (c)-like SDRs

 Score = 55.2 bits (133), Expect = 5e-09
 Identities = 41/142 (28%), Positives = 61/142 (42%), Gaps = 7/142 (4%)

Query: 48  KVVIITGASSGIGEHLAYEYARRGACLALCARREKSLEEVADTAREIGSP--DVITIRAD 105
             V+ITGASSG+G   A   ARRG    + A R+    E A  A+E+G P      +  D
Sbjct: 2   GTVVITGASSGLGLAAAKALARRGEWHVVMACRDFLKAEQA--AQEVGMPKDSYSVLHCD 59

Query: 106 VSKVDDCRSLVEETMNHFGRLDHLVNNAGISSVALFEDIVNITDFKQIMNINFWGSVYTT 165
           ++ +D  R  V+        LD LV NA +      E       F+  + +N  G    T
Sbjct: 60  LASLDSVRQFVDNFRRTGRPLDALVCNAAVYLPTAKEPRFTADGFELTVGVNHLGHFLLT 119

Query: 166 RFAVPHLR---YTKGKIVVLSS 184
              +  L+       +IV++ S
Sbjct: 120 NLLLEDLQRSENASPRIVIVGS 141

Classical SDR-like subgroup containing LPOR and related proteins. Protochlorophyllide (Pchlide) reductases act in chlorophyll biosynthesis. There are distinct enzymes that catalyze Pchlide reduction in light or dark conditions. Light-dependent reduction is via an NADP-dependent SDR, LPOR. Proteins in this subfamily share the glycine-rich NAD-binding motif of the classical SDRs, have a partial match to the canonical active site tetrad, but lack the typical active site Ser. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold (alpha/beta folding pattern with a central beta-sheet), an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Classical SDRs are typically about 250 residues long, while extended SDRs are approximately 350 residues. Sequence identity between different SDR enzymes are typically in the 15-30% range, but the enzymes share the Rossmann fold NAD-binding motif and characteristic NAD-binding and catalytic sequence patterns. These enzymes catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase (15-PGDH) numbering). In addition to the Tyr and Lys, there is often an upstream Ser (Ser-138, 15-PGDH numbering) and/or an Asn (Asn-107, 15-PGDH numbering) contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. Extended SDRs have additional elements in the C-terminal region, and typically have a TGXXGXXG cofactor binding motif. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid synthase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type ketoacyl reductases have a TGXXXGX(1-2)G NAD(P)-binding motif. Some atypical SDRs have lost catalytic activity and/or have an unusual NAD(P)-binding motif and missing or unusual active site residues. Reactions catalyzed within the SDR family include isomerization, decarboxylation, epimerization, C=N bond reduction, dehydratase activity, dehalogenation, Enoyl-CoA reduction, and carbonyl-alcohol oxidoreduction. Length = 311

>gnl|CDD|187656 cd08953, KR_2_SDR_x, ketoreductase (KR), subgroup 2, complex (x) SDRs

 Score = 54.7 bits (132), Expect = 1e-08
 Identities = 34/102 (33%), Positives = 49/102 (48%), Gaps = 5/102 (4%)

Query: 47  GKVVIITGASSGIGEHLAYEYARR-GACLALCARREKSLEEVAD--TAREIGSP--DVIT 101
           G V ++TG + GIG  LA   ARR GA L L  R     EE     T   + +    V+ 
Sbjct: 205 GGVYLVTGGAGGIGRALARALARRYGARLVLLGRSPLPPEEEWKAQTLAALEALGARVLY 264

Query: 102 IRADVSKVDDCRSLVEETMNHFGRLDHLVNNAGISSVALFED 143
           I ADV+     R L+E+    +G +D +++ AG+   AL   
Sbjct: 265 ISADVTDAAAVRRLLEKVRERYGAIDGVIHAAGVLRDALLAQ 306

Ketoreductase, a module of the multidomain polyketide synthase (PKS), has 2 subdomains, each corresponding to a SDR family monomer. The C-terminal subdomain catalyzes the NADPH-dependent reduction of the beta-carbonyl of a polyketide to a hydroxyl group, a step in the biosynthesis of polyketides, such as erythromycin. The N-terminal subdomain, an interdomain linker, is a truncated Rossmann fold which acts to stabilizes the catalytic subdomain. Unlike typical SDRs, the isolated domain does not oligomerize but is composed of 2 subdomains, each resembling an SDR monomer. The active site resembles that of typical SDRs, except that the usual positions of the catalytic Asn and Tyr are swapped, so that the canonical YXXXK motif changes to YXXXN. Modular PKSs are multifunctional structures in which the makeup recapitulates that found in (and may have evolved from) FAS. Polyketide synthesis also proceeds via the addition of 2-carbon units as in fatty acid synthesis. The complex SDR NADP-binding motif, GGXGXXG, is often present, but is not strictly conserved in each instance of the module. This subfamily includes both KR domains of the Bacillus subtilis Pks J,-L, and PksM, and all three KR domains of PksN, components of the megacomplex bacillaene synthase, which synthesizes the antibiotic bacillaene. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold (alpha/beta folding pattern with a central beta-sheet), an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Classical SDRs are typically about 250 residues long, while extended SDRs are approximately 350 residues. Sequence identity between different SDR enzymes are typically in the 15-30% range, but the enzymes share the Rossmann fold NAD-binding motif and characteristic NAD-binding and catalytic sequence patterns. These enzymes catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, human prostaglandin dehydrogenase (PGDH) numbering). In addition to the Tyr and Lys, there is often an upstream Ser (Ser-138, PGDH numbering) and/or an Asn (Asn-107, PGDH numbering) contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. Extended SDRs have additional elements in the C-terminal region, and typically have a TGXXGXXG cofactor binding motif. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid synthase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type KRs have a TGXXXGX(1-2)G NAD(P)-binding motif. Some atypical SDRs have lost catalytic activity and/or have an unusual NAD(P)-binding motif and missing or unusual active site residues. Reactions catalyzed within the SDR family include isomerization, decarboxylation, epimerization, C=N bond reduction, dehydratase activity, dehalogenation, Enoyl-CoA reduction, and carbonyl-alcohol oxidoreduction. Length = 436

>gnl|CDD|171822 PRK12938, PRK12938, acetyacetyl-CoA reductase; Provisional

 Score = 53.1 bits (127), Expect = 2e-08
 Identities = 47/198 (23%), Positives = 88/198 (44%), Gaps = 13/198 (6%)

Query: 45  VSGKVVIITGASSGIGEHLAYEYARRG-----ACLALCARREKSLEEVADTAREIGSPDV 99
           +S ++  +TG   GIG  +     + G      C     RR K LE+     + +G  D 
Sbjct: 1   MSQRIAYVTGGMGGIGTSICQRLHKDGFKVVAGCGPNSPRRVKWLED----QKALGF-DF 55

Query: 100 ITIRADVSKVDDCRSLVEETMNHFGRLDHLVNNAGISSVALFEDIVNITDFKQIMNINFW 159
           I    +V   D  ++  ++     G +D LVNNAGI+   +F  +    D+  +++ N  
Sbjct: 56  IASEGNVGDWDSTKAAFDKVKAEVGEIDVLVNNAGITRDVVFRKMTR-EDWTAVIDTNLT 114

Query: 160 GSVYTTRFAVPHL-RYTKGKIVVLSSAASWLTAPRMSFYNASKAALVLFFETLRVELGSD 218
                T+  +  +     G+I+ +SS          + Y+ +KA +  F  +L  E+ + 
Sbjct: 115 SLFNVTKQVIDGMVERGWGRIINISSVNGQKGQFGQTNYSTAKAGIHGFTMSLAQEVATK 174

Query: 219 -VGVTIVTPGFIESELTQ 235
            V V  V+PG+I +++ +
Sbjct: 175 GVTVNTVSPGYIGTDMVK 192

Length = 246

>gnl|CDD|187619 cd05361, haloalcohol_DH_SDR_c-like, haloalcohol dehalogenase, classical (c) SDRs

 Score = 52.6 bits (126), Expect = 3e-08
 Identities = 30/124 (24%), Positives = 48/124 (38%), Gaps = 2/124 (1%)

Query: 111 DCRSLVEETMNHFGRLDHLVNNAGISSVALFEDIVNITDFKQIMNINFWGSVYTTRFAVP 170
               LV+  +   G +D LV+N  I       D  +  D +Q             + A+ 
Sbjct: 58  KPEELVDAVLQAGGAIDVLVSNDYIPRPMNPIDGTSEADIRQAFEALSIFPFALLQAAIA 117

Query: 171 HLRYTK-GKIVVLSSAASWLTAPRMSFYNASKAALVLFFETLRVELGSD-VGVTIVTPGF 228
            ++    G I+ ++SA         S Y  ++AA V   E+L  EL  D + V  + P F
Sbjct: 118 QMKKAGGGSIIFITSAVPKKPLAYNSLYGPARAAAVALAESLAKELSRDNILVYAIGPNF 177

Query: 229 IESE 232
             S 
Sbjct: 178 FNSP 181

Dehalogenases cleave carbon-halogen bonds. Haloalcohol dehalogenase show low sequence similarity to short-chain dehydrogenases/reductases (SDRs). Like the SDRs, haloalcohol dehalogenases have a conserved catalytic triad (Ser-Tyr-Lys/Arg), and form a Rossmann fold. However, the normal classical SDR NAD(P)-binding motif (TGXXGXG) and NAD-binding function is replaced with a halide binding site, allowing the enzyme to catalyze a dehalogenation reaction. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold (alpha/beta folding pattern with a central beta-sheet), an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Classical SDRs are typically about 250 residues long, while extended SDRs are approximately 350 residues. Sequence identity between different SDR enzymes are typically in the 15-30% range, but the enzymes share the Rossmann fold NAD-binding motif and characteristic NAD-binding and catalytic sequence patterns. These enzymes catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase (15-PGDH) numbering). In addition to the Tyr and Lys, there is often an upstream Ser (Ser-138, 15-PGDH numbering) and/or an Asn (Asn-107, 15-PGDH numbering) contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. Extended SDRs have additional elements in the C-terminal region, and typically have a TGXXGXXG cofactor binding motif. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid synthase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type ketoacyl reductases have a TGXXXGX(1-2)G NAD(P)-binding motif. Some atypical SDRs have lost catalytic activity and/or have an unusual NAD(P)-binding motif and missing or unusual active site residues. Reactions catalyzed within the SDR family include isomerization, decarboxylation, epimerization, C=N bond reduction, dehydratase activity, dehalogenation, Enoyl-CoA reduction, and carbonyl-alcohol oxidoreduction. Length = 242

>gnl|CDD|187669 cd09809, human_WWOX_like_SDR_c-like, human WWOX (WW domain-containing oxidoreductase)-like, classical (c)-like SDRs

 Score = 53.0 bits (127), Expect = 3e-08
 Identities = 55/207 (26%), Positives = 82/207 (39%), Gaps = 32/207 (15%)

Query: 47  GKVVIITGASSGIGEHLAYEYARRGACLAL-CARREKSLEEVADTAREIGSPDVITIRAD 105
           GKV+IITGA+SGIG   A  +A  GA + L C    ++   V+    E     V  +  D
Sbjct: 1   GKVIIITGANSGIGFETARSFALHGAHVILACRNMSRASAAVSRILEEWHKARVEAMTLD 60

Query: 106 VSKVDDCRSLVEETMNHFGRLDHLVNNAGI--SSVALFEDIVNITDFKQIMNINFWGSVY 163
           ++ +   +   E        L  LV NA +      L ED       +    +N  G  Y
Sbjct: 61  LASLRSVQRFAEAFKAKNSPLHVLVCNAAVFALPWTLTED-----GLETTFQVNHLGHFY 115

Query: 164 TTRFAVPHLRYT-KGKIVVLSS---------------AASWLTAPR-----MSFYNASKA 202
             +     LR +   +++V+SS                 S L+ P+     M  YN +K 
Sbjct: 116 LVQLLEDVLRRSAPARVIVVSSESHRFTDLPDSCGNLDFSLLSPPKKKYWSMLAYNRAKL 175

Query: 203 ALVLFFETLRVELGSDVGVTI--VTPG 227
             +LF   L   L S  G+T   + PG
Sbjct: 176 CNILFSNELHRRL-SPRGITSNSLHPG 201

Classical-like SDR domain of human WWOX and related proteins. Proteins in this subfamily share the glycine-rich NAD-binding motif of the classical SDRs, have a partial match to the canonical active site tetrad, but lack the typical active site Ser. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold (alpha/beta folding pattern with a central beta-sheet), an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Classical SDRs are typically about 250 residues long, while extended SDRs are approximately 350 residues. Sequence identity between different SDR enzymes are typically in the 15-30% range, but the enzymes share the Rossmann fold NAD-binding motif and characteristic NAD-binding and catalytic sequence patterns. These enzymes catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase (15-PGDH) numbering). In addition to the Tyr and Lys, there is often an upstream Ser (Ser-138, 15-PGDH numbering) and/or an Asn (Asn-107, 15-PGDH numbering) contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. Extended SDRs have additional elements in the C-terminal region, and typically have a TGXXGXXG cofactor binding motif. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid synthase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type ketoacyl reductases have a TGXXXGX(1-2)G NAD(P)-binding motif. Some atypical SDRs have lost catalytic activity and/or have an unusual NAD(P)-binding motif and missing or unusual active site residues. Reactions catalyzed within the SDR family include isomerization, decarboxylation, epimerization, C=N bond reduction, dehydratase activity, dehalogenation, Enoyl-CoA reduction, and carbonyl-alcohol oxidoreduction. Length = 284

>gnl|CDD|183714 PRK12742, PRK12742, oxidoreductase; Provisional

 Score = 52.5 bits (126), Expect = 3e-08
 Identities = 54/196 (27%), Positives = 85/196 (43%), Gaps = 21/196 (10%)

Query: 44  DVSGKVVIITGASSGIGEHLAYEYARRGACLALCARREKSLEEVADTAREIGSPDVITIR 103
             +GK V++ G S GIG  +   +   GA +       K   E    A+E G+  V T  
Sbjct: 3   AFTGKKVLVLGGSRGIGAAIVRRFVTDGANVRFTYAGSKDAAER--LAQETGATAVQTDS 60

Query: 104 ADVSKVDDCRSLVEETMNHFGRLDHLVNNAGISSVALFEDIVNIT--DFKQIMNINFWGS 161
           AD       R  V + +   G LD LV NAGI   A+F D + +   D  ++  IN    
Sbjct: 61  AD-------RDAVIDVVRKSGALDILVVNAGI---AVFGDALELDADDIDRLFKINIHAP 110

Query: 162 VYTTRFAVPHLRYTK--GKIVVLSSA-ASWLTAPRMSFYNASKAALVLFFETLRVELG-S 217
            +    +V   R     G+I+++ S     +    M+ Y ASK+AL      L  + G  
Sbjct: 111 YHA---SVEAARQMPEGGRIIIIGSVNGDRMPVAGMAAYAASKSALQGMARGLARDFGPR 167

Query: 218 DVGVTIVTPGFIESEL 233
            + + +V PG I+++ 
Sbjct: 168 GITINVVQPGPIDTDA 183

Length = 237

>gnl|CDD|235736 PRK06196, PRK06196, oxidoreductase; Provisional

 Score = 52.0 bits (125), Expect = 6e-08
 Identities = 29/92 (31%), Positives = 48/92 (52%), Gaps = 5/92 (5%)

Query: 44  DVSGKVVIITGASSGIGEHLAYEYARRGACLALCARREKSLEEVADTAREIGSPDVITIR 103
           D+SGK  I+TG  SG+G       A+ GA + + ARR     E       I   +V+ + 
Sbjct: 23  DLSGKTAIVTGGYSGLGLETTRALAQAGAHVIVPARRPDVAREA---LAGIDGVEVVML- 78

Query: 104 ADVSKVDDCRSLVEETMNHFGRLDHLVNNAGI 135
            D++ ++  R+  E  ++   R+D L+NNAG+
Sbjct: 79  -DLADLESVRAFAERFLDSGRRIDILINNAGV 109

Length = 315

>gnl|CDD|187668 cd09808, DHRS-12_like_SDR_c-like, human dehydrogenase/reductase SDR family member (DHRS)-12/FLJ13639-like, classical (c)-like SDRs

 Score = 51.4 bits (123), Expect = 8e-08
 Identities = 28/89 (31%), Positives = 45/89 (50%), Gaps = 1/89 (1%)

Query: 47  GKVVIITGASSGIGEHLAYEYARRGACLAL-CARREKSLEEVADTAREIGSPDVITIRAD 105
           G+  +ITGA+SGIG+  A   A+RG  + + C  + ++ E   +   E G+ ++     D
Sbjct: 1   GRSFLITGANSGIGKAAALAIAKRGGTVHMVCRNQTRAEEARKEIETESGNQNIFLHIVD 60

Query: 106 VSKVDDCRSLVEETMNHFGRLDHLVNNAG 134
           +S        VEE      +L  L+NNAG
Sbjct: 61  MSDPKQVWEFVEEFKEEGKKLHVLINNAG 89

Classical SDR-like subgroup containing human DHRS-12/FLJ13639, the 36K protein of zebrafish CNS myelin, and related proteins. DHRS-12/FLJ13639 is expressed in neurons and oligodendrocytes in the human cerebral cortex. Proteins in this subgroup share the glycine-rich NAD-binding motif of the classical SDRs, have a partial match to the canonical active site tetrad, but lack the typical active site Ser. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold (alpha/beta folding pattern with a central beta-sheet), an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Classical SDRs are typically about 250 residues long, while extended SDRs are approximately 350 residues. Sequence identity between different SDR enzymes are typically in the 15-30% range, but the enzymes share the Rossmann fold NAD-binding motif and characteristic NAD-binding and catalytic sequence patterns. These enzymes catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase (15-PGDH) numbering). In addition to the Tyr and Lys, there is often an upstream Ser (Ser-138, 15-PGDH numbering) and/or an Asn (Asn-107, 15-PGDH numbering) contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. Extended SDRs have additional elements in the C-terminal region, and typically have a TGXXGXXG cofactor binding motif. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid synthase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type ketoacyl reductases have a TGXXXGX(1-2)G NAD(P)-binding motif. Some atypical SDRs have lost catalytic activity and/or have an unusual NAD(P)-binding motif and missing or unusual active site residues. Reactions catalyzed within the SDR family include isomerization, decarboxylation, epimerization, C=N bond reduction, dehydratase activity, dehalogenation, Enoyl-CoA reduction, and carbonyl-alcohol oxidoreduction. Length = 255

>gnl|CDD|183797 PRK12859, PRK12859, 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional

 Score = 50.9 bits (122), Expect = 1e-07
 Identities = 50/222 (22%), Positives = 89/222 (40%), Gaps = 31/222 (13%)

Query: 47  GKVVIITGAS--SGIGEHLAYEYARRGACLALC--ARREKSL------EEVADTAREIGS 96
            KV ++TG S   GIG  +  E A  GA +        +K +      +E      E+  
Sbjct: 6   NKVAVVTGVSRLDGIGAAICKELAEAGADIFFTYWTAYDKEMPWGVDQDEQIQLQEELLK 65

Query: 97  PDVI--TIRADVSKVDDCRSLVEETMNHFGRLDHLVNNAGISSVALFEDI-VNITDFKQI 153
             V   ++  D+++ D  + L+ +     G    LVNNA  S+   F ++     D   +
Sbjct: 66  NGVKVSSMELDLTQNDAPKELLNKVTEQLGYPHILVNNAAYSTNNDFSNLTAEELDKHYM 125

Query: 154 MNIN---FWGSVYTTRFAVPHLRYTKGKIVVLSSAASWLTAPRMSFYNASKAALVLFFET 210
           +N+       S +   F         G+I+ ++S            Y A+K A+     +
Sbjct: 126 VNVRATTLLSSQFARGFDKKS----GGRIINMTSGQFQGPMVGELAYAATKGAIDALTSS 181

Query: 211 LRVELGSDVGVTI--VTP-----GFIESELTQG---KFLTGR 242
           L  E+ + +G+T+  + P     G++  E+ QG    F  GR
Sbjct: 182 LAAEV-AHLGITVNAINPGPTDTGWMTEEIKQGLLPMFPFGR 222

Length = 256

>gnl|CDD|187535 cd02266, SDR, Short-chain dehydrogenases/reductases (SDR)

 Score = 49.8 bits (119), Expect = 2e-07
 Identities = 41/184 (22%), Positives = 65/184 (35%), Gaps = 48/184 (26%)

Query: 50  VIITGASSGIGEHLAYEYARRGACLALCARREKSLEEVADTAREIGSPDVITIRADVSKV 109
           V++TG S GIG  +A   A RG+   L                      V++        
Sbjct: 1   VLVTGGSGGIGGAIARWLASRGSPKVL----------------------VVS-------- 30

Query: 110 DDCRSLVEETMNHFGRLDHLVNNAGISSVALFEDIVNITDFKQIMNINFWGSVYTTRFAV 169
                          R D +V+NA I       D+   +  ++ +  N  G+      A 
Sbjct: 31  ---------------RRDVVVHNAAILDDGRLIDLTG-SRIERAIRANVVGTRRLLEAAR 74

Query: 170 PHLRYT-KGKIVVLSSAASWLTAPRMSFYNASKAALVLFFETLRVE-LGSDVGVTIVTPG 227
             ++    G+ +++SS A    AP +  Y ASKAAL    +    E  G+ +  T V  G
Sbjct: 75  ELMKAKRLGRFILISSVAGLFGAPGLGGYAASKAALDGLAQQWASEGWGNGLPATAVACG 134

Query: 228 FIES 231
               
Sbjct: 135 TWAG 138

SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold (alpha/beta folding pattern with a central beta-sheet), an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Classical SDRs are typically about 250 residues long, while extended SDRs are approximately 350 residues. Sequence identity between different SDR enzymes are typically in the 15-30% range, but the enzymes share the Rossmann fold NAD-binding motif and characteristic NAD-binding and catalytic sequence patterns. These enzymes catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, human prostaglandin dehydrogenase (PGDH) numbering). In addition to the Tyr and Lys, there is often an upstream Ser (Ser-138, PGDH numbering) and/or an Asn (Asn-107, PGDH numbering) contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. Extended SDRs have additional elements in the C-terminal region, and typically have a TGXXGXXG cofactor binding motif. Complex (multidomain) SDRs such as ketoreductase (KR) domains of fatty acid synthase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type KRs have a TGXXXGX(1-2)G NAD(P)-binding motif. Some atypical SDRs have lost catalytic activity and/or have an unusual NAD(P)-binding motif and missing or unusual active site residues. Reactions catalyzed within the SDR family include isomerization, decarboxylation, epimerization, C=N bond reduction, dehydratase activity, dehalogenation, Enoyl-CoA reduction, and carbonyl-alcohol oxidoreduction. Length = 186

>gnl|CDD|236173 PRK08177, PRK08177, short chain dehydrogenase; Provisional

 Score = 50.0 bits (120), Expect = 2e-07
 Identities = 45/196 (22%), Positives = 79/196 (40%), Gaps = 23/196 (11%)

Query: 48  KVVIITGASSGIGEHLAYEYARRGACLALCARR---EKSLEEVADTAREIGSPDVITIRA 104
           +  +I GAS G+G  L      RG  +    R    + +L+ +     E         + 
Sbjct: 2   RTALIIGASRGLGLGLVDRLLERGWQVTATVRGPQQDTALQALPGVHIE---------KL 52

Query: 105 DVSKVDDCRSLVEETMNHFGRLDHLVNNAGISSVALFEDIVNITDFKQIMNINFWGSVYT 164
           D++       L++       R D L  NAGIS     +   + T   +I  +    ++  
Sbjct: 53  DMNDPASLDQLLQRLQGQ--RFDLLFVNAGISG-PAHQSAADATA-AEIGQLFLTNAIAP 108

Query: 165 TRFA---VPHLRYTKGKIVVLSSAASWLTAP---RMSFYNASKAALVLFFETLRVELGS- 217
            R A   +  +R  +G +  +SS    +  P    M  Y ASKAAL     +   ELG  
Sbjct: 109 IRLARRLLGQVRPGQGVLAFMSSQLGSVELPDGGEMPLYKASKAALNSMTRSFVAELGEP 168

Query: 218 DVGVTIVTPGFIESEL 233
            + V  + PG++++++
Sbjct: 169 TLTVLSMHPGWVKTDM 184

Length = 225

>gnl|CDD|183716 PRK12744, PRK12744, short chain dehydrogenase; Provisional

 Score = 49.7 bits (119), Expect = 3e-07
 Identities = 55/193 (28%), Positives = 87/193 (45%), Gaps = 16/193 (8%)

Query: 44  DVSGKVVIITGASSGIGEHLAYEYARRGA-CLAL---CARREKSLEEVADTAREIGSPDV 99
            + GKVV+I G +  +G  +A + A +GA  +A+    A  +   EE     +  G+   
Sbjct: 5   SLKGKVVLIAGGAKNLGGLIARDLAAQGAKAVAIHYNSAASKADAEETVAAVKAAGA-KA 63

Query: 100 ITIRADVSKVDDCRSLVEETMNHFGRLDHLVNNAGISSVALFEDIVNIT--DFKQIMNIN 157
           +  +AD++       L ++    FGR D  +N  G     L + IV I+  ++ ++  +N
Sbjct: 64  VAFQADLTTAAAVEKLFDDAKAAFGRPDIAINTVG---KVLKKPIVEISEAEYDEMFAVN 120

Query: 158 FWGSVYTTRFAVPHLRYTKGKIVVLSSAASWLTA--PRMSFYNASKAALVLFFETLRVEL 215
              + +  + A  HL    GKIV L    S L A  P  S Y  SKA +  F      E 
Sbjct: 121 SKSAFFFIKEAGRHLN-DNGKIVTL--VTSLLGAFTPFYSAYAGSKAPVEHFTRAASKEF 177

Query: 216 GS-DVGVTIVTPG 227
           G+  + VT V PG
Sbjct: 178 GARGISVTAVGPG 190

Length = 257

>gnl|CDD|187582 cd05274, KR_FAS_SDR_x, ketoreductase (KR) and fatty acid synthase (FAS), complex (x) SDRs

 Score = 50.5 bits (121), Expect = 3e-07
 Identities = 29/97 (29%), Positives = 44/97 (45%), Gaps = 3/97 (3%)

Query: 50  VIITGASSGIGEHLAYEYARRGAC-LALCARREKSLEEVADTA-REIGSPDVITIRADVS 107
            +ITG   G+G  +A   A RGA  L L +RR  +    A  A    G   V  +R DV+
Sbjct: 153 YLITGGLGGLGLLVARWLAARGARHLVLLSRRGPAPRAAARAALLRAGGARVSVVRCDVT 212

Query: 108 KVDDCRSLVEETMNHFGRLDHLVNNAGISSVALFEDI 144
                 +L+ E     G L  +++ AG+   AL  ++
Sbjct: 213 DPAALAALLAEL-AAGGPLAGVIHAAGVLRDALLAEL 248

Ketoreductase, a module of the multidomain polyketide synthase (PKS), has 2 subdomains, each corresponding to a SDR family monomer. The C-terminal subdomain catalyzes the NADPH-dependent reduction of the beta-carbonyl of a polyketide to a hydroxyl group, a step in the biosynthesis of polyketides, such as erythromycin. The N-terminal subdomain, an interdomain linker, is a truncated Rossmann fold which acts to stabilizes the catalytic subdomain. Unlike typical SDRs, the isolated domain does not oligomerize but is composed of 2 subdomains, each resembling an SDR monomer. The active site resembles that of typical SDRs, except that the usual positions of the catalytic Asn and Tyr are swapped, so that the canonical YXXXK motif changes to YXXXN. Modular PKSs are multifunctional structures in which the makeup recapitulates that found in (and may have evolved from) FAS. In some instances, such as porcine FAS, an enoyl reductase (ER) module is inserted between the sub-domains. Fatty acid synthesis occurs via the stepwise elongation of a chain (which is attached to acyl carrier protein, ACP) with 2-carbon units. Eukaryotic systems consist of large, multifunctional synthases (type I) while bacterial, type II systems, use single function proteins. Fungal fatty acid synthase uses a dodecamer of 6 alpha and 6 beta subunits. In mammalian type FAS cycles, ketoacyl synthase forms acetoacetyl-ACP which is reduced by the NADP-dependent beta-KR, forming beta-hydroxyacyl-ACP, which is in turn dehydrated by dehydratase to a beta-enoyl intermediate, which is reduced by NADP-dependent beta-ER. Polyketide synthesis also proceeds via the addition of 2-carbon units as in fatty acid synthesis. The complex SDR NADP-binding motif, GGXGXXG, is often present, but is not strictly conserved in each instance of the module. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold (alpha/beta folding pattern with a central beta-sheet), an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Classical SDRs are typically about 250 residues long, while extended SDRs are approximately 350 residues. Sequence identity between different SDR enzymes are typically in the 15-30% range, but the enzymes share the Rossmann fold NAD-binding motif and characteristic NAD-binding and catalytic sequence patterns. These enzymes catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, human prostaglandin dehydrogenase (PGDH) numbering). In addition to the Tyr and Lys, there is often an upstream Ser (Ser-138, PGDH numbering) and/or an Asn (Asn-107, PGDH numbering) contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. Extended SDRs have additional elements in the C-terminal region, and typically have a TGXXGXXG cofactor binding motif. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid synthase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type KRs have a TGXXXGX(1-2)G NAD(P)-binding motif. Some atypical SDRs have lost catalytic activity and/or have an unusual NAD(P)-binding motif and missing or unusual active site residues. Reactions catalyzed within the SDR family include isomerization, decarboxylation, epimerization, C=N bond reduction, dehydratase activity, dehalogenation, Enoyl-CoA reduction, and carbonyl-alcohol oxidoreduction. Length = 375

>gnl|CDD|187654 cd08951, DR_C-13_KR_SDR_c_like, daunorubicin C-13 ketoreductase (KR), classical (c)-like SDRs

 Score = 49.8 bits (119), Expect = 3e-07
 Identities = 25/86 (29%), Positives = 42/86 (48%), Gaps = 5/86 (5%)

Query: 50  VIITGASSGIGEHLAYEYARRGACLALCARREKSLEEVADTAREIGSPDVITIRADVSKV 109
           + ITG+S G+G   A     +G  + L AR +K   +             + I  D+S +
Sbjct: 10  IFITGSSDGLGLAAARTLLHQGHEVVLHARSQKRAADAKAACPGAAG---VLI-GDLSSL 65

Query: 110 DDCRSLVEETMNHFGRLDHLVNNAGI 135
            + R L ++ +N  GR D +++NAGI
Sbjct: 66  AETRKLADQ-VNAIGRFDAVIHNAGI 90

Daunorubicin is a clinically important therapeutic compound used in some cancer treatments. Daunorubicin C-13 ketoreductase is member of the classical SDR family with a canonical glycine-rich NAD(P)-binding motif, but lacking a complete match to the active site tetrad characteristic of this group. The critical Tyr, plus the Lys and upstream Asn are present, but the catalytic Ser is replaced, generally by Gln. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold (alpha/beta folding pattern with a central beta-sheet), an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Classical SDRs are typically about 250 residues long, while extended SDRs are approximately 350 residues. Sequence identity between different SDR enzymes are typically in the 15-30% range, but the enzymes share the Rossmann fold NAD-binding motif and characteristic NAD-binding and catalytic sequence patterns. These enzymes catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, human prostaglandin dehydrogenase (PGDH) numbering). In addition to the Tyr and Lys, there is often an upstream Ser (Ser-138, PGDH numbering) and/or an Asn (Asn-107, PGDH numbering) contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. Extended SDRs have additional elements in the C-terminal region, and typically have a TGXXGXXG cofactor binding motif. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid synthase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type KRs have a TGXXXGX(1-2)G NAD(P)-binding motif. Some atypical SDRs have lost catalytic activity and/or have an unusual NAD(P)-binding motif and missing or unusual active site residues. Reactions catalyzed within the SDR family include isomerization, decarboxylation, epimerization, C=N bond reduction, dehydratase activity, dehalogenation, Enoyl-CoA reduction, and carbonyl-alcohol oxidoreduction. Length = 260

>gnl|CDD|181417 PRK08416, PRK08416, 7-alpha-hydroxysteroid dehydrogenase; Provisional

 Score = 49.4 bits (118), Expect = 4e-07
 Identities = 50/207 (24%), Positives = 94/207 (45%), Gaps = 24/207 (11%)

Query: 42  SEDVSGKVVIITGASSGIGEHLAYEYARRGACLALCARREKSLEEVADTAREIGSPDVIT 101
           S ++ GK ++I+G + GIG+ + YE+A+ G  +A         EE    A ++     I 
Sbjct: 3   SNEMKGKTLVISGGTRGIGKAIVYEFAQSGVNIAFTYNSNV--EEANKIAEDLEQKYGIK 60

Query: 102 IRA---DVSKVDDCRSLVEETMNHFGRLDHLVNNAGISSVALFEDIVNITDFKQIMNINF 158
            +A   ++ + +  + L ++    F R+D  ++NA IS  A+      +  + + M +  
Sbjct: 61  AKAYPLNILEPETYKELFKKIDEDFDRVDFFISNAIISGRAV------VGGYTKFMRLKP 114

Query: 159 WG--SVYTTR---FAVPHLRYTK-------GKIVVLSSAASWLTAPRMSFYNASKAALVL 206
            G  ++YT     F V      K       G I+ LSS  + +     + +  SKAA+  
Sbjct: 115 KGLNNIYTATVNAFVVGAQEAAKRMEKVGGGSIISLSSTGNLVYIENYAGHGTSKAAVET 174

Query: 207 FFETLRVELGS-DVGVTIVTPGFIESE 232
             +    ELG  ++ V  V+ G I+++
Sbjct: 175 MVKYAATELGEKNIRVNAVSGGPIDTD 201

Length = 260

>gnl|CDD|235627 PRK05854, PRK05854, short chain dehydrogenase; Provisional

 Score = 49.3 bits (118), Expect = 5e-07
 Identities = 56/179 (31%), Positives = 79/179 (44%), Gaps = 19/179 (10%)

Query: 44  DVSGKVVIITGASSGIGEHLAYEYARRGACLALCARREKSLEEVADTAREIGSPDV-ITI 102
           D+SGK  ++TGAS G+G  LA   A  GA + L  R     E      R    PD  +++
Sbjct: 11  DLSGKRAVVTGASDGLGLGLARRLAAAGAEVILPVRNRAKGEAAVAAIRT-AVPDAKLSL 69

Query: 103 RA-DVSKVDDCRSLVEETMNHFGRLDH-LVNNAGISSVALFEDIVNITDFKQIMNINFWG 160
           RA D+S +    +L  E +   GR  H L+NNAG+ +    E       F+     N  G
Sbjct: 70  RALDLSSLASVAAL-GEQLRAEGRPIHLLINNAGVMTPP--ERQTTADGFELQFGTNHLG 126

Query: 161 SVYTTRFAVPHLRYTKGKIVVLSSAAS------W--LTAPR----MSFYNASKAALVLF 207
               T   +P LR  + ++   SS A+      W  L   R    M  Y+ SK A+ LF
Sbjct: 127 HFALTAHLLPLLRAGRARVTSQSSIAARRGAINWDDLNWERSYAGMRAYSQSKIAVGLF 185

Length = 313

>gnl|CDD|223696 COG0623, FabI, Enoyl-[acyl-carrier-protein]

 Score = 49.1 bits (118), Expect = 5e-07
 Identities = 47/184 (25%), Positives = 81/184 (44%), Gaps = 16/184 (8%)

Query: 44  DVSGKVVIITGASS--GIGEHLAYEYARRGACLALCARREKSLEEVADTAREIGSPDVIT 101
            + GK ++I G ++   I   +A   A +GA LA   + E+  + V + A E+GS  V  
Sbjct: 3   LLEGKRILIMGVANNRSIAWGIAKALAEQGAELAFTYQGERLEKRVEELAEELGSDLV-- 60

Query: 102 IRADVSKVDDCRSLVEETMNHFGRLDHLVNNAGIS-SVALFEDIVNIT--DFKQIMNINF 158
           +  DV+  +   +L       +G+LD LV++   +    L  D ++ +   F   M+I  
Sbjct: 61  LPCDVTNDESIDALFATIKKKWGKLDGLVHSIAFAPKEELKGDYLDTSREGFLIAMDI-- 118

Query: 159 WGSVYT----TRFAVPHLRYTKGKIVVLSSAASWLTAPRMSFYNASKAALVLFFETLRVE 214
             S Y+     + A P +    G I+ L+   S    P  +    +KAAL      L  +
Sbjct: 119 --SAYSFTALAKAARPLMN-NGGSILTLTYLGSERVVPNYNVMGVAKAALEASVRYLAAD 175

Query: 215 LGSD 218
           LG +
Sbjct: 176 LGKE 179

Length = 259

>gnl|CDD|187630 cd05372, ENR_SDR, Enoyl acyl carrier protein (ACP) reductase (ENR), divergent SDR

 Score = 48.0 bits (115), Expect = 1e-06
 Identities = 43/163 (26%), Positives = 75/163 (46%), Gaps = 7/163 (4%)

Query: 47  GKVVIITGASS--GIGEHLAYEYARRGACLALCARREKSLEEVADTAREIGSPDVITIRA 104
           GK ++ITG ++   I   +A      GA LA   + E   + V   A  +G   ++ +  
Sbjct: 1   GKRILITGIANDRSIAWGIAKALHEAGAELAFTYQPEALRKRVEKLAERLGESALV-LPC 59

Query: 105 DVSKVDDCRSLVEETMNHFGRLDHLVNNAGIS-SVALFEDIVNIT--DFKQIMNINFWGS 161
           DVS  ++ + L  E    +G+LD LV++   +  V L    ++ +   F + ++I+ +  
Sbjct: 60  DVSNDEEIKELFAEVKKDWGKLDGLVHSIAFAPKVQLKGPFLDTSRKGFLKALDISAYSL 119

Query: 162 VYTTRFAVPHLRYTKGKIVVLSSAASWLTAPRMSFYNASKAAL 204
           V   + A+P +    G IV LS   S    P  +    +KAAL
Sbjct: 120 VSLAKAALPIMN-PGGSIVTLSYLGSERVVPGYNVMGVAKAAL 161

This bacterial subgroup of ENRs includes Escherichia coli ENR. ENR catalyzes the NAD(P)H-dependent reduction of enoyl-ACP in the last step of fatty acid biosynthesis. De novo fatty acid biosynthesis is catalyzed by the fatty acid synthetase complex, through the serial addition of 2-carbon subunits. In bacteria and plants,ENR catalyzes one of six synthetic steps in this process. Oilseed rape ENR, and also apparently the NADH-specific form of Escherichia coli ENR, is tetrameric. Although similar to the classical SDRs, this group does not have the canonical catalytic tetrad, nor does it have the typical Gly-rich NAD-binding pattern. Such so-called divergent SDRs have a GXXXXXSXA NAD-binding motif and a YXXMXXXK (or YXXXMXXXK) active site motif. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold (alpha/beta folding pattern with a central beta-sheet), an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Classical SDRs are typically about 250 residues long, while extended SDRs are approximately 350 residues. Sequence identity between different SDR enzymes are typically in the 15-30% range, but the enzymes share the Rossmann fold NAD-binding motif and characteristic NAD-binding and catalytic sequence patterns. These enzymes catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase (15-PGDH) numbering). In addition to the Tyr and Lys, there is often an upstream Ser (Ser-138, 15-PGDH numbering) and/or an Asn (Asn-107, 15-PGDH numbering) contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. Extended SDRs have additional elements in the C-terminal region, and typically have a TGXXGXXG cofactor binding motif. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid synthase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type ketoacyl reductases have a TGXXXGX(1-2)G NAD(P)-binding motif. Some atypical SDRs have lost catalytic activity and/or have an unusual NAD(P)-binding motif and missing or unusual active site residues. Reactions catalyzed within the SDR family include isomerization, decarboxylation, epimerization, C=N bond reduction, dehydratase activity, dehalogenation, Enoyl-CoA reduction, and carbonyl-alcohol oxidoreduction. Length = 250

>gnl|CDD|180766 PRK06940, PRK06940, short chain dehydrogenase; Provisional

 Score = 47.7 bits (114), Expect = 1e-06
 Identities = 33/92 (35%), Positives = 47/92 (51%), Gaps = 10/92 (10%)

Query: 48  KVVIITGASSGIGEHLAYEYARR---GACLALCARREKSLEEVADTAREIGSPDVITIRA 104
           +VV++ GA  GIG+ +A    RR   G  + L    E++LE  A T RE G  DV T   
Sbjct: 3   EVVVVIGAG-GIGQAIA----RRVGAGKKVLLADYNEENLEAAAKTLREAGF-DVSTQEV 56

Query: 105 DVSKVDDCRSLVEETMNHFGRLDHLVNNAGIS 136
           DVS  +  ++L        G +  LV+ AG+S
Sbjct: 57  DVSSRESVKALAATAQT-LGPVTGLVHTAGVS 87

Length = 275

>gnl|CDD|187589 cd05328, 3alpha_HSD_SDR_c, alpha hydroxysteroid dehydrogenase (3alpha_HSD), classical (c) SDRs

 Score = 47.1 bits (112), Expect = 2e-06
 Identities = 54/229 (23%), Positives = 79/229 (34%), Gaps = 58/229 (25%)

Query: 49  VVIITGASSGIGEHLAYEYARRGACLALCARREKSLEEVADTAREIGSPD-VITIRADVS 107
            ++ITGA+SGIG   A      G  +     RE      AD   ++ +P+      ADV 
Sbjct: 1   TIVITGAASGIGAATAELLEDAGHTVIGIDLRE------ADVIADLSTPEGRAAAIADVL 54

Query: 108 KVDDCRSLVEETMNHFGRLDHLVNNAGISSVALFEDIVNITDFKQIMNINFWGSVYTTRF 167
               C           G LD LVN AG+    +   ++ +         N++G       
Sbjct: 55  --ARCS----------GVLDGLVNCAGVGGTTVAGLVLKV---------NYFGLRALMEA 93

Query: 168 AVPHL-RYTKGKIVVLSSAAS--W----------LTAPRMSF---------------YNA 199
            +P L +      VV+SS A   W          L A   +                Y  
Sbjct: 94  LLPRLRKGHGPAAVVVSSIAGAGWAQDKLELAKALAAGTEARAVALAEHAGQPGYLAYAG 153

Query: 200 SKAALVLFFETLRV--ELGSDVGVTIVTPGFIESELTQGKFLTGRRQNS 246
           SK AL ++          G+ V V  V PG +E+ + Q      R   S
Sbjct: 154 SKEALTVWTRRRAATWLYGAGVRVNTVAPGPVETPILQAFLQDPRGGES 202

Bacterial 3-alpha_HSD, which catalyzes the NAD-dependent oxidoreduction of hydroxysteroids, is a dimeric member of the classical SDR family. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold (alpha/beta folding pattern with a central beta-sheet), an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Classical SDRs are typically about 250 residues long, while extended SDRs are approximately 350 residues. Sequence identity between different SDR enzymes are typically in the 15-30% range, but the enzymes share the Rossmann fold NAD-binding motif and characteristic NAD-binding and catalytic sequence patterns. These enzymes catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase (15-PGDH) numbering). In addition to the Tyr and Lys, there is often an upstream Ser (Ser-138, 15-PGDH numbering) and/or an Asn (Asn-107, 15-PGDH numbering) contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. Extended SDRs have additional elements in the C-terminal region, and typically have a TGXXGXXG cofactor binding motif. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid synthase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type ketoacyl reductases have a TGXXXGX(1-2)G NAD(P)-binding motif. Some atypical SDRs have lost catalytic activity and/or have an unusual NAD(P)-binding motif and missing or unusual active site residues. Reactions catalyzed within the SDR family include isomerization, decarboxylation, epimerization, C=N bond reduction, dehydratase activity, dehalogenation, Enoyl-CoA reduction, and carbonyl-alcohol oxidoreduction. Length = 250

>gnl|CDD|180669 PRK06720, PRK06720, hypothetical protein; Provisional

 Score = 46.1 bits (109), Expect = 2e-06
 Identities = 28/100 (28%), Positives = 54/100 (54%), Gaps = 2/100 (2%)

Query: 45  VSGKVVIITGASSGIGEHLAYEYARRGACLALCARREKSLEEVADTAREIGSPDVITIRA 104
           ++GKV I+TG   GIG + A   A++GA + +    ++S +   +    +G  + + +  
Sbjct: 14  LAGKVAIVTGGGIGIGRNTALLLAKQGAKVIVTDIDQESGQATVEEITNLGG-EALFVSY 72

Query: 105 DVSKVDDCRSLVEETMNHFGRLDHLVNNAGISSV-ALFED 143
           D+ K  D + ++  T+N F R+D L  NAG+  + ++F  
Sbjct: 73  DMEKQGDWQRVISITLNAFSRIDMLFQNAGLYKIDSIFSR 112

Length = 169

>gnl|CDD|180983 PRK07453, PRK07453, protochlorophyllide oxidoreductase; Validated

 Score = 47.3 bits (113), Expect = 2e-06
 Identities = 33/94 (35%), Positives = 48/94 (51%), Gaps = 17/94 (18%)

Query: 50  VIITGASSGIGEHLAYEYARRG-----ACLALCARREKSLEEVADTAREIGSP--DVITI 102
           VIITGASSG+G + A   A+RG     AC        ++L++    A+E+G P      I
Sbjct: 9   VIITGASSGVGLYAAKALAKRGWHVIMAC--------RNLKKAEAAAQELGIPPDSYTII 60

Query: 103 RADVSKVDDCRSLVEETMNHFGR-LDHLVNNAGI 135
             D+  +D  R  V++     G+ LD LV NA +
Sbjct: 61  HIDLGDLDSVRRFVDD-FRALGKPLDALVCNAAV 93

Length = 322

>gnl|CDD|236399 PRK09186, PRK09186, flagellin modification protein A; Provisional

 Score = 45.4 bits (108), Expect = 8e-06
 Identities = 35/158 (22%), Positives = 70/158 (44%), Gaps = 7/158 (4%)

Query: 46  SGKVVIITGASSGIGEHLAYEYARRGACLALCARREKSLEEVADT-AREIGSPDVITIRA 104
            GK ++ITGA   IG  L       G  +      +++L E+ ++  +E  S  +  +  
Sbjct: 3   KGKTILITGAGGLIGSALVKAILEAGGIVIAADIDKEALNELLESLGKEFKSKKLSLVEL 62

Query: 105 DVSKVDDCRSLVEETMNHFGRLDHLVNNA---GISSVALFEDIVNITDFKQIMNINFWGS 161
           D++  +     + ++   +G++D  VN A          F D V++ DF + ++++   S
Sbjct: 63  DITDQESLEEFLSKSAEKYGKIDGAVNCAYPRNKDYGKKFFD-VSLDDFNENLSLHLGSS 121

Query: 162 VYTTR-FAVPHLRYTKGKIVVLSSAASWLTAPRMSFYN 198
              ++ FA    +   G +V +SS    + AP+   Y 
Sbjct: 122 FLFSQQFAKYFKKQGGGNLVNISSIYG-VVAPKFEIYE 158

Length = 256

>gnl|CDD|180774 PRK06953, PRK06953, short chain dehydrogenase; Provisional

 Score = 44.7 bits (106), Expect = 1e-05
 Identities = 49/173 (28%), Positives = 65/173 (37%), Gaps = 37/173 (21%)

Query: 48  KVVIITGASSGIGEHLAYEYARRGACLALCARREKSLEEVADTAREIGSPDVITIRADVS 107
           K V+I GAS GIG     +Y   G  +   AR   +L  +     E  + DV    A V+
Sbjct: 2   KTVLIVGASRGIGREFVRQYRADGWRVIATARDAAALAALQALGAEALALDV-ADPASVA 60

Query: 108 ----KVDDCRSLVEETMNHFGRLDHLVNNAGISSVALFEDIVNIT--DFKQIMNINFWGS 161
               K+D               LD  V  AG+      E +  IT  DF  +M+ N  G 
Sbjct: 61  GLAWKLDG------------EALDAAVYVAGVYG-PRTEGVEPITREDFDAVMHTNVLGP 107

Query: 162 VYTTRFAVPHLRYTKGKIVVLSS----------AASWLTAPRMSFYNASKAAL 204
           +      +P +    G + VLSS             WL       Y ASKAAL
Sbjct: 108 MQLLPILLPLVEAAGGVLAVLSSRMGSIGDATGTTGWL-------YRASKAAL 153

Length = 222

>gnl|CDD|200089 TIGR01289, LPOR, light-dependent protochlorophyllide reductase

 Score = 44.9 bits (106), Expect = 2e-05
 Identities = 30/88 (34%), Positives = 42/88 (47%), Gaps = 4/88 (4%)

Query: 50  VIITGASSGIGEHLAYEYARRGACLALCARREKSLEEVADTAREIG-SPDVITI-RADVS 107
           VIITGASSG+G + A   A  G    + A R+    +    A+ +G   D  TI   D+ 
Sbjct: 6   VIITGASSGLGLYAAKALAATGEWHVIMACRD--FLKAEQAAKSLGMPKDSYTIMHLDLG 63

Query: 108 KVDDCRSLVEETMNHFGRLDHLVNNAGI 135
            +D  R  V++       LD LV NA +
Sbjct: 64  SLDSVRQFVQQFRESGRPLDALVCNAAV 91

This model represents the light-dependent, NADPH-dependent form of protochlorophyllide reductase. It belongs to the short chain alcohol dehydrogenase family, in contrast to the nitrogenase-related light-independent form [Biosynthesis of cofactors, prosthetic groups, and carriers, Chlorophyll and bacteriochlorphyll]. Length = 314

>gnl|CDD|236229 PRK08303, PRK08303, short chain dehydrogenase; Provisional

 Score = 43.4 bits (103), Expect = 4e-05
 Identities = 58/207 (28%), Positives = 95/207 (45%), Gaps = 22/207 (10%)

Query: 47  GKVVIITGASSGIGEHLAYEYARRGACLALCAR----------REKSLEEVADTAREIGS 96
           GKV ++ GA+ G G  +A E    GA + +  R          R +++EE A+     G 
Sbjct: 8   GKVALVAGATRGAGRGIAVELGAAGATVYVTGRSTRARRSEYDRPETIEETAELVTAAGG 67

Query: 97  PDVITIRADVSKVDDCRSLVEETMNHFGRLDHLVNNA-GISSVALFEDIV---NITDFKQ 152
              I ++ D    +  R+LVE      GRLD LVN+  G   +  +   V   ++    +
Sbjct: 68  RG-IAVQVDHLVPEQVRALVERIDREQGRLDILVNDIWGGEKLFEWGKPVWEHSLDKGLR 126

Query: 153 IMNINFWGSVYTTRFAVPHLRYTKGKIVVL---SSAASWLTAPRMS-FYNASKAALVLFF 208
           ++ +     + T+ FA+P L    G +VV     +A    T  R+S FY+ +K ++    
Sbjct: 127 MLRLAIDTHLITSHFALPLLIRRPGGLVVEITDGTAEYNATHYRLSVFYDLAKTSVNRLA 186

Query: 209 ETLRVELGSDVGVTIV--TPGFIESEL 233
            +L  EL    G T V  TPG++ SE+
Sbjct: 187 FSLAHELAPH-GATAVALTPGWLRSEM 212

Length = 305

>gnl|CDD|131732 TIGR02685, pter_reduc_Leis, pteridine reductase

 Score = 43.4 bits (102), Expect = 4e-05
 Identities = 24/90 (26%), Positives = 39/90 (43%), Gaps = 5/90 (5%)

Query: 49  VVIITGASSGIGEHLAYEYARRGACLALCARR-EKSLEEVADTAREIGSPDVITIRADVS 107
             ++TGA+  IG  +A    + G  + L   R   +   +A           +T +AD+S
Sbjct: 3   AAVVTGAAKRIGSSIAVALHQEGYRVVLHYHRSAAAASTLAAELNARRPNSAVTCQADLS 62

Query: 108 KV----DDCRSLVEETMNHFGRLDHLVNNA 133
                   C ++++     FGR D LVNNA
Sbjct: 63  NSATLFSRCEAIIDACFRAFGRCDVLVNNA 92

Pteridine reductase is an enzyme used by trypanosomatids (including Trypanosoma cruzi and Leishmania major) to obtain reduced pteridines by salvage rather than biosynthetic pathways. Enzymes in T. cruzi described as pteridine reductase 1 (PTR1) and pteridine reductase 2 (PTR2) have different activity profiles. PTR1 is more active with with fully oxidized biopterin and folate than with reduced forms, while PTR2 reduces dihydrobiopterin and dihydrofolate but not oxidized pteridines. T. cruzi PTR1 and PTR2 are more similar to each other in sequence than either is to the pteridine reductase of Leishmania major, and all are included in this family. Length = 267

>gnl|CDD|187645 cd08941, 3KS_SDR_c, 3-keto steroid reductase, classical (c) SDRs

 Score = 42.4 bits (100), Expect = 9e-05
 Identities = 35/145 (24%), Positives = 51/145 (35%), Gaps = 21/145 (14%)

Query: 48  KVVIITGASSGIG----EHLAYEYA-RRGACLALCARREKSLEEVADTAREIGSPDVIT- 101
           KVV++TGA+SG+G    E L  E        L L  R  +  E              +  
Sbjct: 2   KVVLVTGANSGLGLAICERLLAEDDENPELTLILACRNLQRAEAACRALLASHPDARVVF 61

Query: 102 --IRADVSKVDDCRSLVEETMNHFGRLDHLVNNAGISSVALFEDIVNITDFKQIMNI-NF 158
             +  D+S +    +  +E    + RLD+L  NAGI                 I  I   
Sbjct: 62  DYVLVDLSNMVSVFAAAKELKKRYPRLDYLYLNAGIM------------PNPGIDWIGAI 109

Query: 159 WGSVYTTRFAVPHLRYTKGKIVVLS 183
              +    FAV +  Y      +LS
Sbjct: 110 KEVLTNPLFAVTNPTYKIQAEGLLS 134

3-keto steroid reductase (in concert with other enzymes) catalyzes NADP-dependent sterol C-4 demethylation, as part of steroid biosynthesis. 3-keto reductase is a classical SDR, with a well conserved canonical active site tetrad and fairly well conserved characteristic NAD-binding motif. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold (alpha/beta folding pattern with a central beta-sheet), an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Classical SDRs are typically about 250 residues long, while extended SDRs are approximately 350 residues. Sequence identity between different SDR enzymes are typically in the 15-30% range, but the enzymes share the Rossmann fold NAD-binding motif and characteristic NAD-binding and catalytic sequence patterns. These enzymes catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase (15-PGDH) numbering). In addition to the Tyr and Lys, there is often an upstream Ser (Ser-138, 15-PGDH numbering) and/or an Asn (Asn-107, 15-PGDH numbering) contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. Extended SDRs have additional elements in the C-terminal region, and typically have a TGXXGXXG cofactor binding motif. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid synthase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type ketoacyl reductases have a TGXXXGX(1-2)G NAD(P)-binding motif. Some atypical SDRs have lost catalytic activity and/or have an unusual NAD(P)-binding motif and missing or unusual active site residues. Reactions catalyzed within the SDR family include isomerization, decarboxylation, epimerization, C=N bond reduction, dehydratase activity, dehalogenation, Enoyl-CoA reduction, and carbonyl-alcohol oxidoreduction. Length = 290

>gnl|CDD|181416 PRK08415, PRK08415, enoyl-(acyl carrier protein) reductase; Provisional

 Score = 41.7 bits (98), Expect = 2e-04
 Identities = 53/183 (28%), Positives = 81/183 (44%), Gaps = 20/183 (10%)

Query: 47  GKVVIITGASS--GIGEHLAYEYARRGACLALCARREKSLEEVADTAREIGSPDVITIRA 104
           GK  +I G ++   I   +A     +GA LA     E   + V   A+E+GS  V  +  
Sbjct: 5   GKKGLIVGVANNKSIAYGIAKACFEQGAELAFTYLNEALKKRVEPIAQELGSDYVYEL-- 62

Query: 105 DVSKVDDCRSLVEETMNHFGRLDHLVNN-AGISSVALFEDIVNITDFKQIMNINFWGSVY 163
           DVSK +  +SL E      G++D +V++ A     AL    +  +  K+  NI    SVY
Sbjct: 63  DVSKPEHFKSLAESLKKDLGKIDFIVHSVAFAPKEALEGSFLETS--KEAFNIAMEISVY 120

Query: 164 T----TRFAVPHLRYTKGKIVVLSSAASWLTAPR-MSFYN---ASKAALVLFFETLRVEL 215
           +    TR  +P L      ++ L    S+L   + +  YN    +KAAL      L V+L
Sbjct: 121 SLIELTRALLPLLN-DGASVLTL----SYLGGVKYVPHYNVMGVAKAALESSVRYLAVDL 175

Query: 216 GSD 218
           G  
Sbjct: 176 GKK 178

Length = 274

>gnl|CDD|236342 PRK08862, PRK08862, short chain dehydrogenase; Provisional

 Score = 40.1 bits (94), Expect = 4e-04
 Identities = 24/90 (26%), Positives = 44/90 (48%), Gaps = 2/90 (2%)

Query: 44  DVSGKVVIITGASSGIGEHLAYEYARRGACLALCARREKSLEEVADTAREIGSPDVITIR 103
           D+   +++IT A S +G  ++  +AR GA L LC + + +L++  +    +   +V + +
Sbjct: 2   DIKSSIILITSAGSVLGRTISCHFARLGATLILCDQDQSALKDTYEQCSALTD-NVYSFQ 60

Query: 104 ADVSKVDDCRSLVEETMNHFGR-LDHLVNN 132
                 +  R L +     F R  D LVNN
Sbjct: 61  LKDFSQESIRHLFDAIEQQFNRAPDVLVNN 90

Length = 227

>gnl|CDD|181020 PRK07533, PRK07533, enoyl-(acyl carrier protein) reductase; Provisional

 Score = 39.9 bits (94), Expect = 5e-04
 Identities = 53/211 (25%), Positives = 88/211 (41%), Gaps = 51/211 (24%)

Query: 44  DVSGKVVIITGASSGIGEH-LAYEYARR----GACLALCARREKSLEEVADTAREIGSPD 98
            ++GK  ++ G ++   E  +A+  AR     GA LA+    +K+   V   A E+ +P 
Sbjct: 7   PLAGKRGLVVGIAN---EQSIAWGCARAFRALGAELAVTYLNDKARPYVEPLAEELDAP- 62

Query: 99  VITIRADVSKVDDCRSLVEETMNHFGRLDHLVNNAGISSVALF---EDI-VNITD----- 149
            I +  DV +     ++       +GRLD L++     S+A F   ED+   + D     
Sbjct: 63  -IFLPLDVREPGQLEAVFARIAEEWGRLDFLLH-----SIA-FAPKEDLHGRVVDCSREG 115

Query: 150 FKQIMNINFWGSVYTTRFAVPHLRYTKGKIVVLSSAASWLTAPRMSFYNAS--------- 200
           F   M+++    +   R A P          ++++  S LT   MS+Y A          
Sbjct: 116 FALAMDVSCHSFIRMARLAEP----------LMTNGGSLLT---MSYYGAEKVVENYNLM 162

Query: 201 ---KAALVLFFETLRVELG-SDVGVTIVTPG 227
              KAAL      L  ELG   + V  ++PG
Sbjct: 163 GPVKAALESSVRYLAAELGPKGIRVHAISPG 193

Length = 258

>gnl|CDD|177654 PLN00015, PLN00015, protochlorophyllide reductase

 Score = 39.3 bits (92), Expect = 0.001
 Identities = 27/87 (31%), Positives = 37/87 (42%), Gaps = 4/87 (4%)

Query: 51  IITGASSGIGEHLAYEYARRGACLALCARREKSLEEVADTAREIGSPD--VITIRADVSK 108
           IITGASSG+G   A   A  G    + A R     +    A+  G P      +  D++ 
Sbjct: 1   IITGASSGLGLATAKALAETGKWHVVMACR--DFLKAERAAKSAGMPKDSYTVMHLDLAS 58

Query: 109 VDDCRSLVEETMNHFGRLDHLVNNAGI 135
           +D  R  V+        LD LV NA +
Sbjct: 59  LDSVRQFVDNFRRSGRPLDVLVCNAAV 85

Length = 308

Conserved Domains Detected by HHsearch

Original result of HHsearch against CDD database

ID	Length	Definition	Probability
Query	248
KOG1205	282	consensus Predicted dehydrogenase [Secondary metab	100.0
COG0300	265	DltE Short-chain dehydrogenases of various substra	100.0
COG4221	246	Short-chain alcohol dehydrogenase of unknown speci	100.0
KOG1201	300	consensus Hydroxysteroid 17-beta dehydrogenase 11	100.0
PRK08339	263	short chain dehydrogenase; Provisional	100.0
PRK06079	252	enoyl-(acyl carrier protein) reductase; Provisiona	100.0
PRK06505	271	enoyl-(acyl carrier protein) reductase; Provisiona	100.0
PRK08415	274	enoyl-(acyl carrier protein) reductase; Provisiona	100.0
PRK08589	272	short chain dehydrogenase; Validated	100.0
PRK08690	261	enoyl-(acyl carrier protein) reductase; Provisiona	100.0
PRK12481	251	2-deoxy-D-gluconate 3-dehydrogenase; Provisional	100.0
PRK08594	257	enoyl-(acyl carrier protein) reductase; Provisiona	100.0
PRK07063	260	short chain dehydrogenase; Provisional	100.0
PRK07478	254	short chain dehydrogenase; Provisional	100.0
PRK07533	258	enoyl-(acyl carrier protein) reductase; Provisiona	100.0
PRK07370	258	enoyl-(acyl carrier protein) reductase; Validated	100.0
PRK06603	260	enoyl-(acyl carrier protein) reductase; Provisiona	100.0
PRK07062	265	short chain dehydrogenase; Provisional	100.0
PRK07984	262	enoyl-(acyl carrier protein) reductase; Provisiona	100.0
PRK08862	227	short chain dehydrogenase; Provisional	100.0
PRK06997	260	enoyl-(acyl carrier protein) reductase; Provisiona	100.0
KOG0725	270	consensus Reductases with broad range of substrate	100.0
PRK05867	253	short chain dehydrogenase; Provisional	100.0
PRK07791	286	short chain dehydrogenase; Provisional	100.0
PRK08416	260	7-alpha-hydroxysteroid dehydrogenase; Provisional	100.0
PLN02730	303	enoyl-[acyl-carrier-protein] reductase	100.0
PRK08303	305	short chain dehydrogenase; Provisional	100.0
KOG1200	256	consensus Mitochondrial/plastidial beta-ketoacyl-A	100.0
PRK06139	330	short chain dehydrogenase; Provisional	100.0
PRK08159	272	enoyl-(acyl carrier protein) reductase; Provisiona	100.0
PRK05876	275	short chain dehydrogenase; Provisional	100.0
PLN02780	320	ketoreductase/ oxidoreductase	100.0
TIGR03325	262	BphB_TodD cis-2,3-dihydrobiphenyl-2,3-diol dehydro	100.0
PRK06200	263	2,3-dihydroxy-2,3-dihydrophenylpropionate dehydrog	100.0
PRK06398	258	aldose dehydrogenase; Validated	100.0
PRK05599	246	hypothetical protein; Provisional	100.0
PRK05872	296	short chain dehydrogenase; Provisional	100.0
PRK08265	261	short chain dehydrogenase; Provisional	100.0
PRK07889	256	enoyl-(acyl carrier protein) reductase; Provisiona	100.0
PRK06114	254	short chain dehydrogenase; Provisional	100.0
PRK12747	252	short chain dehydrogenase; Provisional	100.0
PRK08085	254	gluconate 5-dehydrogenase; Provisional	100.0
PRK06172	253	short chain dehydrogenase; Provisional	100.0
PRK06935	258	2-deoxy-D-gluconate 3-dehydrogenase; Provisional	100.0
PRK07035	252	short chain dehydrogenase; Provisional	100.0
PRK08993	253	2-deoxy-D-gluconate 3-dehydrogenase; Validated	100.0
PRK08277	278	D-mannonate oxidoreductase; Provisional	100.0
PRK06128	300	oxidoreductase; Provisional	100.0
PRK07985	294	oxidoreductase; Provisional	100.0
PRK07097	265	gluconate 5-dehydrogenase; Provisional	100.0
PLN02253	280	xanthoxin dehydrogenase	100.0
PRK06125	259	short chain dehydrogenase; Provisional	100.0
PRK05717	255	oxidoreductase; Validated	100.0
PRK05854	313	short chain dehydrogenase; Provisional	100.0
PRK07523	255	gluconate 5-dehydrogenase; Provisional	100.0
PRK08936	261	glucose-1-dehydrogenase; Provisional	100.0
PRK12859	256	3-ketoacyl-(acyl-carrier-protein) reductase; Provi	100.0
PRK07831	262	short chain dehydrogenase; Provisional	100.0
PRK09242	257	tropinone reductase; Provisional	100.0
TIGR01832	248	kduD 2-deoxy-D-gluconate 3-dehydrogenase. This mod	100.0
PRK08643	256	acetoin reductase; Validated	100.0
PRK06113	255	7-alpha-hydroxysteroid dehydrogenase; Validated	100.0
PRK08340	259	glucose-1-dehydrogenase; Provisional	100.0
PRK06463	255	fabG 3-ketoacyl-(acyl-carrier-protein) reductase;	100.0
PRK12823	260	benD 1,6-dihydroxycyclohexa-2,4-diene-1-carboxylat	100.0
PRK05866	293	short chain dehydrogenase; Provisional	100.0
PRK07109	334	short chain dehydrogenase; Provisional	100.0
PRK07677	252	short chain dehydrogenase; Provisional	100.0
PRK08278	273	short chain dehydrogenase; Provisional	100.0
KOG4169	261	consensus 15-hydroxyprostaglandin dehydrogenase an	100.0
PRK07856	252	short chain dehydrogenase; Provisional	100.0
PRK07825	273	short chain dehydrogenase; Provisional	100.0
PRK07890	258	short chain dehydrogenase; Provisional	100.0
COG3967	245	DltE Short-chain dehydrogenase involved in D-alani	100.0
KOG1610	322	consensus Corticosteroid 11-beta-dehydrogenase and	100.0
PRK07024	257	short chain dehydrogenase; Provisional	100.0
PRK08703	239	short chain dehydrogenase; Provisional	100.0
PRK06484	520	short chain dehydrogenase; Validated	100.0
PRK06194	287	hypothetical protein; Provisional	100.0
PRK06124	256	gluconate 5-dehydrogenase; Provisional	100.0
PRK08628	258	short chain dehydrogenase; Provisional	100.0
PRK06483	236	dihydromonapterin reductase; Provisional	100.0
PRK07814	263	short chain dehydrogenase; Provisional	100.0
PRK07792	306	fabG 3-ketoacyl-(acyl-carrier-protein) reductase;	100.0
PRK05855	582	short chain dehydrogenase; Validated	100.0
PF13561	241	adh_short_C2: Enoyl-(Acyl carrier protein) reducta	100.0
TIGR01500	256	sepiapter_red sepiapterin reductase. This model de	100.0
PRK06300	299	enoyl-(acyl carrier protein) reductase; Provisiona	100.0
PRK07067	257	sorbitol dehydrogenase; Provisional	100.0
PRK12743	256	oxidoreductase; Provisional	100.0
PRK08226	263	short chain dehydrogenase; Provisional	100.0
PRK07576	264	short chain dehydrogenase; Provisional	100.0
PRK05993	277	short chain dehydrogenase; Provisional	100.0
PRK06841	255	short chain dehydrogenase; Provisional	100.0
PRK07904	253	short chain dehydrogenase; Provisional	100.0
PRK12938	246	acetyacetyl-CoA reductase; Provisional	100.0
PRK06182	273	short chain dehydrogenase; Validated	100.0
PRK08063	250	enoyl-(acyl carrier protein) reductase; Provisiona	100.0
PRK05650	270	short chain dehydrogenase; Provisional	100.0
PRK06940	275	short chain dehydrogenase; Provisional	100.0
PRK06701	290	short chain dehydrogenase; Provisional	100.0
PRK12748	256	3-ketoacyl-(acyl-carrier-protein) reductase; Provi	100.0
PRK06523	260	short chain dehydrogenase; Provisional	100.0
TIGR01289	314	LPOR light-dependent protochlorophyllide reductase	100.0
PRK06171	266	sorbitol-6-phosphate 2-dehydrogenase; Provisional	100.0
KOG1014	312	consensus 17 beta-hydroxysteroid dehydrogenase typ	100.0
PRK12939	250	short chain dehydrogenase; Provisional	100.0
PRK06138	252	short chain dehydrogenase; Provisional	100.0
PRK12384	259	sorbitol-6-phosphate dehydrogenase; Provisional	100.0
PRK07666	239	fabG 3-ketoacyl-(acyl-carrier-protein) reductase;	100.0
PRK07231	251	fabG 3-ketoacyl-(acyl-carrier-protein) reductase;	100.0
PRK06500	249	short chain dehydrogenase; Provisional	100.0
PRK07832	272	short chain dehydrogenase; Provisional	100.0
PRK09072	263	short chain dehydrogenase; Provisional	100.0
PRK06949	258	short chain dehydrogenase; Provisional	100.0
PRK12937	245	short chain dehydrogenase; Provisional	100.0
PRK08642	253	fabG 3-ketoacyl-(acyl-carrier-protein) reductase;	100.0
PRK07454	241	short chain dehydrogenase; Provisional	100.0
PRK08251	248	short chain dehydrogenase; Provisional	100.0
KOG1207	245	consensus Diacetyl reductase/L-xylulose reductase	100.0
PRK12744	257	short chain dehydrogenase; Provisional	100.0
TIGR02415	254	23BDH acetoin reductases. One member of this famil	100.0
PRK06197	306	short chain dehydrogenase; Provisional	100.0
PRK06484	520	short chain dehydrogenase; Validated	100.0
PRK06180	277	short chain dehydrogenase; Provisional	100.0
PRK13394	262	3-hydroxybutyrate dehydrogenase; Provisional	100.0
PRK08213	259	gluconate 5-dehydrogenase; Provisional	100.0
PRK06179	270	short chain dehydrogenase; Provisional	100.0
PRK06196	315	oxidoreductase; Provisional	100.0
PRK08267	260	short chain dehydrogenase; Provisional	100.0
PRK05693	274	short chain dehydrogenase; Provisional	100.0
PLN00015	308	protochlorophyllide reductase	100.0
PRK08263	275	short chain dehydrogenase; Provisional	100.0
PRK12429	258	3-hydroxybutyrate dehydrogenase; Provisional	100.0
PRK06123	248	short chain dehydrogenase; Provisional	100.0
PRK05875	276	short chain dehydrogenase; Provisional	100.0
PRK06914	280	short chain dehydrogenase; Provisional	100.0
PRK08220	252	2,3-dihydroxybenzoate-2,3-dehydrogenase; Validated	100.0
PRK12936	245	3-ketoacyl-(acyl-carrier-protein) reductase NodG;	100.0
PRK07774	250	short chain dehydrogenase; Provisional	100.0
PRK12935	247	acetoacetyl-CoA reductase; Provisional	100.0
PRK08945	247	putative oxoacyl-(acyl carrier protein) reductase;	100.0
TIGR03206	250	benzo_BadH 2-hydroxycyclohexanecarboxyl-CoA dehydr	100.0
PRK06181	263	short chain dehydrogenase; Provisional	100.0
TIGR02685	267	pter_reduc_Leis pteridine reductase. Pteridine red	100.0
KOG1209	289	consensus 1-Acyl dihydroxyacetone phosphate reduct	100.0
KOG1208	314	consensus Dehydrogenases with different specificit	100.0
PRK09134	258	short chain dehydrogenase; Provisional	100.0
PRK06057	255	short chain dehydrogenase; Provisional	100.0
PRK07453	322	protochlorophyllide oxidoreductase; Validated	100.0
PRK07201	657	short chain dehydrogenase; Provisional	100.0
PRK09186	256	flagellin modification protein A; Provisional	100.0
PRK07102	243	short chain dehydrogenase; Provisional	100.0
PRK06947	248	glucose-1-dehydrogenase; Provisional	100.0
PRK12746	254	short chain dehydrogenase; Provisional	100.0
COG1028	251	FabG Dehydrogenases with different specificities (	100.0
KOG1611	249	consensus Predicted short chain-type dehydrogenase	100.0
PRK07775	274	short chain dehydrogenase; Provisional	100.0
PF00106	167	adh_short: short chain dehydrogenase alcohol dehyd	100.0
PRK05884	223	short chain dehydrogenase; Provisional	100.0
PRK12742	237	oxidoreductase; Provisional	100.0
PRK06198	260	short chain dehydrogenase; Provisional	100.0
TIGR01831	239	fabG_rel 3-oxoacyl-(acyl-carrier-protein) reductas	100.0
PRK07069	251	short chain dehydrogenase; Validated	99.98
PRK08217	253	fabG 3-ketoacyl-(acyl-carrier-protein) reductase;	99.98
PRK06077	252	fabG 3-ketoacyl-(acyl-carrier-protein) reductase;	99.98
PRK10538	248	malonic semialdehyde reductase; Provisional	99.98
TIGR01829	242	AcAcCoA_reduct acetoacetyl-CoA reductase. (R)-3-hy	99.98
PRK12824	245	acetoacetyl-CoA reductase; Provisional	99.98
PRK06550	235	fabG 3-ketoacyl-(acyl-carrier-protein) reductase;	99.98
PRK06482	276	short chain dehydrogenase; Provisional	99.98
PRK09135	249	pteridine reductase; Provisional	99.98
PRK05565	247	fabG 3-ketoacyl-(acyl-carrier-protein) reductase;	99.98
PRK07326	237	short chain dehydrogenase; Provisional	99.97
PRK12827	249	short chain dehydrogenase; Provisional	99.97
PRK12745	256	3-ketoacyl-(acyl-carrier-protein) reductase; Provi	99.97
PRK08177	225	short chain dehydrogenase; Provisional	99.97
PRK06101	240	short chain dehydrogenase; Provisional	99.97
TIGR02632	676	RhaD_aldol-ADH rhamnulose-1-phosphate aldolase/alc	99.97
PRK12826	251	3-ketoacyl-(acyl-carrier-protein) reductase; Revie	99.97
PRK09730	247	putative NAD(P)-binding oxidoreductase; Provisiona	99.97
PRK07578	199	short chain dehydrogenase; Provisional	99.97
PRK06924	251	short chain dehydrogenase; Provisional	99.97
PRK05557	248	fabG 3-ketoacyl-(acyl-carrier-protein) reductase;	99.97
PRK12828	239	short chain dehydrogenase; Provisional	99.97
PRK07060	245	short chain dehydrogenase; Provisional	99.97
KOG1210	331	consensus Predicted 3-ketosphinganine reductase [S	99.97
PRK07074	257	short chain dehydrogenase; Provisional	99.97
PRK05653	246	fabG 3-ketoacyl-(acyl-carrier-protein) reductase;	99.97
PRK07577	234	short chain dehydrogenase; Provisional	99.97
PRK07023	243	short chain dehydrogenase; Provisional	99.97
PRK12829	264	short chain dehydrogenase; Provisional	99.97
PRK09291	257	short chain dehydrogenase; Provisional	99.97
TIGR01963	255	PHB_DH 3-hydroxybutyrate dehydrogenase. This model	99.97
PRK12825	249	fabG 3-ketoacyl-(acyl-carrier-protein) reductase;	99.97
PRK07041	230	short chain dehydrogenase; Provisional	99.97
PRK08261	450	fabG 3-ketoacyl-(acyl-carrier-protein) reductase;	99.97
PRK07806	248	short chain dehydrogenase; Provisional	99.97
KOG1199	260	consensus Short-chain alcohol dehydrogenase/3-hydr	99.97
PRK08324	681	short chain dehydrogenase; Validated	99.97
PRK08264	238	short chain dehydrogenase; Validated	99.97
PRK09009	235	C factor cell-cell signaling protein; Provisional	99.96
COG0623	259	FabI Enoyl-[acyl-carrier-protein]	99.96
PRK05786	238	fabG 3-ketoacyl-(acyl-carrier-protein) reductase;	99.96
TIGR01830	239	3oxo_ACP_reduc 3-oxoacyl-(acyl-carrier-protein) re	99.96
PRK06953	222	short chain dehydrogenase; Provisional	99.96
PRK08017	256	oxidoreductase; Provisional	99.96
PRK12367	245	short chain dehydrogenase; Provisional	99.95
PRK08219	227	short chain dehydrogenase; Provisional	99.95
KOG1204	253	consensus Predicted dehydrogenase [Secondary metab	99.95
TIGR02813	2582	omega_3_PfaA polyketide-type polyunsaturated fatty	99.94
smart00822	180	PKS_KR This enzymatic domain is part of bacterial	99.92
PRK12428	241	3-alpha-hydroxysteroid dehydrogenase; Provisional	99.92
PRK07424	406	bifunctional sterol desaturase/short chain dehydro	99.92
PF08659	181	KR: KR domain; InterPro: IPR013968 This domain is	99.9
KOG1478	341	consensus 3-keto sterol reductase [Lipid transport	99.9
PRK13656	398	trans-2-enoyl-CoA reductase; Provisional	99.89
TIGR03589	324	PseB UDP-N-acetylglucosamine 4,6-dehydratase. This	99.89
TIGR02622	349	CDP_4_6_dhtase CDP-glucose 4,6-dehydratase. Member	99.87
PLN02989	325	cinnamyl-alcohol dehydrogenase family protein	99.86
PRK06720	169	hypothetical protein; Provisional	99.85
PLN03209	576	translocon at the inner envelope of chloroplast su	99.84
PLN02653	340	GDP-mannose 4,6-dehydratase	99.83
PLN02986	322	cinnamyl-alcohol dehydrogenase family protein	99.83
PLN00198	338	anthocyanidin reductase; Provisional	99.82
PLN02896	353	cinnamyl-alcohol dehydrogenase	99.81
PLN02572	442	UDP-sulfoquinovose synthase	99.8
PLN02583	297	cinnamoyl-CoA reductase	99.8
TIGR01472	343	gmd GDP-mannose 4,6-dehydratase. Excluded from thi	99.8
PLN02650	351	dihydroflavonol-4-reductase	99.8
PRK10217	355	dTDP-glucose 4,6-dehydratase; Provisional	99.8
PLN02214	342	cinnamoyl-CoA reductase	99.78
PLN02240	352	UDP-glucose 4-epimerase	99.78
PLN02662	322	cinnamyl-alcohol dehydrogenase family protein	99.78
COG1086	588	Predicted nucleoside-diphosphate sugar epimerases	99.75
KOG1502	327	consensus Flavonol reductase/cinnamoyl-CoA reducta	99.75
PRK10675	338	UDP-galactose-4-epimerase; Provisional	99.74
PRK15181	348	Vi polysaccharide biosynthesis protein TviC; Provi	99.73
TIGR01181	317	dTDP_gluc_dehyt dTDP-glucose 4,6-dehydratase. This	99.73
PRK10084	352	dTDP-glucose 4,6 dehydratase; Provisional	99.73
COG1087	329	GalE UDP-glucose 4-epimerase [Cell envelope biogen	99.72
PLN02686	367	cinnamoyl-CoA reductase	99.71
PF02719	293	Polysacc_synt_2: Polysaccharide biosynthesis prote	99.71
TIGR01179	328	galE UDP-glucose-4-epimerase. This enzyme intercon	99.69
PLN02427	386	UDP-apiose/xylose synthase	99.69
TIGR03466	328	HpnA hopanoid-associated sugar epimerase. The sequ	99.68
PF01073	280	3Beta_HSD: 3-beta hydroxysteroid dehydrogenase/iso	99.65
PLN00141	251	Tic62-NAD(P)-related group II protein; Provisional	99.65
COG1088	340	RfbB dTDP-D-glucose 4,6-dehydratase [Cell envelope	99.63
PF01370	236	Epimerase: NAD dependent epimerase/dehydratase fam	99.62
KOG1371	343	consensus UDP-glucose 4-epimerase/UDP-sulfoquinovo	99.62
TIGR01746	367	Thioester-redct thioester reductase domain. It has	99.62
PLN02695	370	GDP-D-mannose-3',5'-epimerase	99.58
PRK08125	660	bifunctional UDP-glucuronic acid decarboxylase/UDP	99.58
PLN02260	668	probable rhamnose biosynthetic enzyme	99.58
PRK11150	308	rfaD ADP-L-glycero-D-mannoheptose-6-epimerase; Pro	99.57
PRK11908	347	NAD-dependent epimerase/dehydratase family protein	99.57
TIGR02197	314	heptose_epim ADP-L-glycero-D-manno-heptose-6-epime	99.56
PLN02657	390	3,8-divinyl protochlorophyllide a 8-vinyl reductas	99.56
PLN02206	442	UDP-glucuronate decarboxylase	99.55
TIGR01214	287	rmlD dTDP-4-dehydrorhamnose reductase. This enzyme	99.54
COG0451	314	WcaG Nucleoside-diphosphate-sugar epimerases [Cell	99.52
PLN02166	436	dTDP-glucose 4,6-dehydratase	99.52
PRK09987	299	dTDP-4-dehydrorhamnose reductase; Provisional	99.5
PLN02725	306	GDP-4-keto-6-deoxymannose-3,5-epimerase-4-reductas	99.48
KOG4022	236	consensus Dihydropteridine reductase DHPR/QDPR [Am	99.41
PF07993	249	NAD_binding_4: Male sterility protein; InterPro: I	99.41
PRK07201	657	short chain dehydrogenase; Provisional	99.41
PLN02996	491	fatty acyl-CoA reductase	99.4
PF08643	299	DUF1776: Fungal family of unknown function (DUF177	99.39
CHL00194	317	ycf39 Ycf39; Provisional	99.36
PF13460	183	NAD_binding_10: NADH(P)-binding ; PDB: 3OH8_A 3E8X	99.35
PF04321	286	RmlD_sub_bind: RmlD substrate binding domain; Inte	99.34
PLN02778	298	3,5-epimerase/4-reductase	99.33
KOG1430	361	consensus C-3 sterol dehydrogenase/3-beta-hydroxys	99.3
PRK05865	854	hypothetical protein; Provisional	99.25
COG1089	345	Gmd GDP-D-mannose dehydratase [Cell envelope bioge	99.23
COG1091	281	RfbD dTDP-4-dehydrorhamnose reductase [Cell envelo	99.22
TIGR02114	227	coaB_strep phosphopantothenate--cysteine ligase, s	99.19
PLN02503	605	fatty acyl-CoA reductase 2	99.19
KOG1429	350	consensus dTDP-glucose 4-6-dehydratase/UDP-glucuro	99.16
PRK08309	177	short chain dehydrogenase; Provisional	99.15
PLN02260	668	probable rhamnose biosynthetic enzyme	99.12
COG3320	382	Putative dehydrogenase domain of multifunctional n	99.11
TIGR03443	1389	alpha_am_amid L-aminoadipate-semialdehyde dehydrog	99.08
TIGR01777	292	yfcH conserved hypothetical protein TIGR01777. Thi	98.99
TIGR03649	285	ergot_EASG ergot alkaloid biosynthesis protein, AF	98.96
PRK05579	399	bifunctional phosphopantothenoylcysteine decarboxy	98.88
PLN00016	378	RNA-binding protein; Provisional	98.85
PRK12548	289	shikimate 5-dehydrogenase; Provisional	98.84
PRK12320	699	hypothetical protein; Provisional	98.84
cd01078	194	NAD_bind_H4MPT_DH NADP binding domain of methylene	98.79
KOG1202	2376	consensus Animal-type fatty acid synthase and rela	98.78
PRK08261	450	fabG 3-ketoacyl-(acyl-carrier-protein) reductase;	98.73
KOG0747	331	consensus Putative NAD+-dependent epimerases [Carb	98.73
COG1090	297	Predicted nucleoside-diphosphate sugar epimerase [	98.7
COG4982	866	3-oxoacyl-[acyl-carrier protein]	98.62
TIGR00521	390	coaBC_dfp phosphopantothenoylcysteine decarboxylas	98.58
PRK06732	229	phosphopantothenate--cysteine ligase; Validated	98.58
PF05368	233	NmrA: NmrA-like family; InterPro: IPR008030 NmrA i	98.57
COG0702	275	Predicted nucleoside-diphosphate-sugar epimerases	98.51
KOG1221	467	consensus Acyl-CoA reductase [Lipid transport and	98.46
KOG2865	391	consensus NADH:ubiquinone oxidoreductase, NDUFA9/3	98.45
COG1748	389	LYS9 Saccharopine dehydrogenase and related protei	98.37
PRK14106	450	murD UDP-N-acetylmuramoyl-L-alanyl-D-glutamate syn	98.3
PRK09620	229	hypothetical protein; Provisional	98.29
PF01488	135	Shikimate_DH: Shikimate / quinate 5-dehydrogenase;	98.28
KOG2733	423	consensus Uncharacterized membrane protein [Functi	98.28
PF03435	386	Saccharop_dh: Saccharopine dehydrogenase ; InterPr	98.24
PLN00106	323	malate dehydrogenase	98.15
KOG1372	376	consensus GDP-mannose 4,6 dehydratase [Carbohydrat	98.15
PRK14982	340	acyl-ACP reductase; Provisional	98.05
PTZ00325	321	malate dehydrogenase; Provisional	97.94
KOG1203	411	consensus Predicted dehydrogenase [Carbohydrate tr	97.92
KOG1431	315	consensus GDP-L-fucose synthetase [Carbohydrate tr	97.88
cd01065	155	NAD_bind_Shikimate_DH NAD(P) binding domain of Shi	97.84
cd01336	325	MDH_cytoplasmic_cytosolic Cytoplasmic and cytosoli	97.82
PRK00258	278	aroE shikimate 5-dehydrogenase; Reviewed	97.79
PRK02472	447	murD UDP-N-acetylmuramoyl-L-alanyl-D-glutamate syn	97.78
TIGR00507	270	aroE shikimate 5-dehydrogenase. This model finds p	97.76
cd08253	325	zeta_crystallin Zeta-crystallin with NADP-dependen	97.75
PF04127	185	DFP: DNA / pantothenate metabolism flavoprotein; I	97.74
COG2910	211	Putative NADH-flavin reductase [General function p	97.69
cd08266	342	Zn_ADH_like1 Alcohol dehydrogenases of the MDR fam	97.64
PLN02520	529	bifunctional 3-dehydroquinate dehydratase/shikimat	97.64
COG0169	283	AroE Shikimate 5-dehydrogenase [Amino acid transpo	97.61
PRK12549	284	shikimate 5-dehydrogenase; Reviewed	97.57
TIGR02813	2582	omega_3_PfaA polyketide-type polyunsaturated fatty	97.48
PRK13940	414	glutamyl-tRNA reductase; Provisional	97.44
PRK14027	283	quinate/shikimate dehydrogenase; Provisional	97.43
cd00704	323	MDH Malate dehydrogenase. Malate dehydrogenase (MD	97.42
KOG2774	366	consensus NAD dependent epimerase [General functio	97.41
PRK06849	389	hypothetical protein; Provisional	97.4
cd05291	306	HicDH_like L-2-hydroxyisocapronate dehydrogenases	97.4
TIGR01809	282	Shik-DH-AROM shikimate-5-dehydrogenase, fungal ARO	97.4
PRK12475	338	thiamine/molybdopterin biosynthesis MoeB-like prot	97.38
PRK15116	268	sulfur acceptor protein CsdL; Provisional	97.34
TIGR02356	202	adenyl_thiF thiazole biosynthesis adenylyltransfer	97.33
PF00056	141	Ldh_1_N: lactate/malate dehydrogenase, NAD binding	97.31
TIGR01758	324	MDH_euk_cyt malate dehydrogenase, NAD-dependent. T	97.3
cd01075	200	NAD_bind_Leu_Phe_Val_DH NAD(P) binding domain of l	97.28
cd00755	231	YgdL_like Family of activating enzymes (E1) of ubi	97.27
PRK12749	288	quinate/shikimate dehydrogenase; Reviewed	97.26
PRK13982	475	bifunctional SbtC-like/phosphopantothenoylcysteine	97.24
COG0569	225	TrkA K+ transport systems, NAD-binding component [	97.21
cd08295	338	double_bond_reductase_like Arabidopsis alkenal dou	97.19
PRK05086	312	malate dehydrogenase; Provisional	97.16
PRK09424	509	pntA NAD(P) transhydrogenase subunit alpha; Provis	97.15
PRK00066	315	ldh L-lactate dehydrogenase; Reviewed	97.14
TIGR00715	256	precor6x_red precorrin-6x reductase. This enzyme w	97.13
PRK14968	188	putative methyltransferase; Provisional	97.11
TIGR02853	287	spore_dpaA dipicolinic acid synthetase, A subunit.	97.1
cd00757	228	ThiF_MoeB_HesA_family ThiF_MoeB_HesA. Family of E1	97.03
TIGR00518	370	alaDH alanine dehydrogenase. The family of known L	97.03
cd05188	271	MDR Medium chain reductase/dehydrogenase (MDR)/zin	97.03
KOG4039	238	consensus Serine/threonine kinase TIP30/CC3 [Signa	97.01
COG0373	414	HemA Glutamyl-tRNA reductase [Coenzyme metabolism]	97.01
PRK08762	376	molybdopterin biosynthesis protein MoeB; Validated	96.98
PF00899	135	ThiF: ThiF family; InterPro: IPR000594 Ubiquitin-a	96.95
cd01080	168	NAD_bind_m-THF_DH_Cyclohyd NADP binding domain of	96.95
PLN03154	348	putative allyl alcohol dehydrogenase; Provisional	96.92
COG0604	326	Qor NADPH:quinone reductase and related Zn-depende	96.91
cd01338	322	MDH_choloroplast_like Chloroplast-like malate dehy	96.9
cd08259	332	Zn_ADH5 Alcohol dehydrogenases of the MDR family.	96.9
cd05276	323	p53_inducible_oxidoreductase PIG3 p53-inducible qu	96.89
PRK07688	339	thiamine/molybdopterin biosynthesis ThiF/MoeB-like	96.89
TIGR02825	325	B4_12hDH leukotriene B4 12-hydroxydehydrogenase/15	96.87
PRK08644	212	thiamine biosynthesis protein ThiF; Provisional	96.86
cd08293	345	PTGR2 Prostaglandin reductase. Prostaglandins and	96.85
KOG1198	347	consensus Zinc-binding oxidoreductase [Energy prod	96.83
TIGR01470	205	cysG_Nterm siroheme synthase, N-terminal domain. T	96.83
PF02826	178	2-Hacid_dh_C: D-isomer specific 2-hydroxyacid dehy	96.82
TIGR00561	511	pntA NAD(P) transhydrogenase, alpha subunit. In so	96.81
TIGR01381	664	E1_like_apg7 E1-like protein-activating enzyme Gsa	96.8
PRK05597	355	molybdopterin biosynthesis protein MoeB; Validated	96.76
COG3007	398	Uncharacterized paraquat-inducible protein B [Func	96.76
TIGR01035	417	hemA glutamyl-tRNA reductase. This enzyme, togethe	96.75
PRK00045	423	hemA glutamyl-tRNA reductase; Reviewed	96.74
PRK05690	245	molybdopterin biosynthesis protein MoeB; Provision	96.73
PRK09496	453	trkA potassium transporter peripheral membrane com	96.72
TIGR02355	240	moeB molybdopterin synthase sulfurylase MoeB. This	96.71
COG3268	382	Uncharacterized conserved protein [Function unknow	96.66
cd05213	311	NAD_bind_Glutamyl_tRNA_reduct NADP-binding domain	96.66
PRK09310	477	aroDE bifunctional 3-dehydroquinate dehydratase/sh	96.59
PRK08223	287	hypothetical protein; Validated	96.56
PRK05600	370	thiamine biosynthesis protein ThiF; Validated	96.53
PF02254	116	TrkA_N: TrkA-N domain; InterPro: IPR003148 The reg	96.52
cd05294	309	LDH-like_MDH_nadp A lactate dehydrogenases-like st	96.52
COG1064	339	AdhP Zn-dependent alcohol dehydrogenases [General	96.51
PLN02602	350	lactate dehydrogenase	96.5
TIGR02354	200	thiF_fam2 thiamine biosynthesis protein ThiF, fami	96.5
PRK08306	296	dipicolinate synthase subunit A; Reviewed	96.47
cd01487	174	E1_ThiF_like E1_ThiF_like. Member of superfamily o	96.46
PLN00203	519	glutamyl-tRNA reductase	96.45
PRK04308	445	murD UDP-N-acetylmuramoyl-L-alanyl-D-glutamate syn	96.45
cd00650	263	LDH_MDH_like NAD-dependent, lactate dehydrogenase-	96.43
PRK06719	157	precorrin-2 dehydrogenase; Validated	96.41
PRK04148	134	hypothetical protein; Provisional	96.41
PLN02819	1042	lysine-ketoglutarate reductase/saccharopine dehydr	96.4
TIGR02824	325	quinone_pig3 putative NAD(P)H quinone oxidoreducta	96.39
PRK10669	558	putative cation:proton antiport protein; Provision	96.38
cd01483	143	E1_enzyme_family Superfamily of activating enzymes	96.37
cd08294	329	leukotriene_B4_DH_like 13-PGR is a bifunctional en	96.34
PRK09880	343	L-idonate 5-dehydrogenase; Provisional	96.33
PRK14192	283	bifunctional 5,10-methylene-tetrahydrofolate dehyd	96.32
PRK08328	231	hypothetical protein; Provisional	96.32
cd05288	329	PGDH Prostaglandin dehydrogenases. Prostaglandins	96.31
PLN00112	444	malate dehydrogenase (NADP); Provisional	96.28
PTZ00117	319	malate dehydrogenase; Provisional	96.24
PRK01438	480	murD UDP-N-acetylmuramoyl-L-alanyl-D-glutamate syn	96.23
TIGR01759	323	MalateDH-SF1 malate dehydrogenase. This model repr	96.22
PRK06718	202	precorrin-2 dehydrogenase; Reviewed	96.21
PRK09496	453	trkA potassium transporter peripheral membrane com	96.2
cd01492	197	Aos1_SUMO Ubiquitin activating enzyme (E1) subunit	96.19
cd08268	328	MDR2 Medium chain dehydrogenases/reductase (MDR)/z	96.19
cd01485	198	E1-1_like Ubiquitin activating enzyme (E1), repeat	96.16
cd05293	312	LDH_1 A subgroup of L-lactate dehydrogenases. L-la	96.14
PRK05442	326	malate dehydrogenase; Provisional	96.1
PF12242	78	Eno-Rase_NADH_b: NAD(P)H binding domain of trans-2	96.03
cd01489	312	Uba2_SUMO Ubiquitin activating enzyme (E1) subunit	96.03
cd08244	324	MDR_enoyl_red Possible enoyl reductase. Member ide	95.99
cd01484	234	E1-2_like Ubiquitin activating enzyme (E1), repeat	95.93
KOG1197	336	consensus Predicted quinone oxidoreductase [Energy	95.9
PRK14851	679	hypothetical protein; Provisional	95.88
cd05212	140	NAD_bind_m-THF_DH_Cyclohyd_like NAD(P) binding dom	95.86
cd08290	341	ETR 2-enoyl thioester reductase (ETR). 2-enoyl thi	95.83
cd01337	310	MDH_glyoxysomal_mitochondrial Glyoxysomal and mito	95.83
TIGR01915	219	npdG NADPH-dependent F420 reductase. This model re	95.81
PTZ00082	321	L-lactate dehydrogenase; Provisional	95.81
PF01113	124	DapB_N: Dihydrodipicolinate reductase, N-terminus;	95.81
cd05290	307	LDH_3 A subgroup of L-lactate dehydrogenases. L-la	95.8
PRK06223	307	malate dehydrogenase; Reviewed	95.76
cd08239	339	THR_DH_like L-threonine dehydrogenase (TDH)-like.	95.76
cd05295	452	MDH_like Malate dehydrogenase-like. These MDH-like	95.74
TIGR01757	387	Malate-DH_plant malate dehydrogenase, NADP-depende	95.74
PRK08655	437	prephenate dehydrogenase; Provisional	95.72
cd05311	226	NAD_bind_2_malic_enz NAD(P) binding domain of mali	95.7
PRK10537	393	voltage-gated potassium channel; Provisional	95.7
TIGR02818	368	adh_III_F_hyde S-(hydroxymethyl)glutathione dehydr	95.69
PRK07411	390	hypothetical protein; Validated	95.66
cd08292	324	ETR_like_2 2-enoyl thioester reductase (ETR) like	95.66
PF13241	103	NAD_binding_7: Putative NAD(P)-binding; PDB: 3DFZ_	95.64
cd08238	410	sorbose_phosphate_red L-sorbose-1-phosphate reduct	95.64
cd08300	368	alcohol_DH_class_III class III alcohol dehydrogena	95.61
PRK07878	392	molybdopterin biosynthesis-like protein MoeZ; Vali	95.56
cd08243	320	quinone_oxidoreductase_like_1 Quinone oxidoreducta	95.56
PRK12550	272	shikimate 5-dehydrogenase; Reviewed	95.55
PF02737	180	3HCDH_N: 3-hydroxyacyl-CoA dehydrogenase, NAD bind	95.54
PRK03562	621	glutathione-regulated potassium-efflux system prot	95.52
PF03446	163	NAD_binding_2: NAD binding domain of 6-phosphogluc	95.48
COG4123	248	Predicted O-methyltransferase [General function pr	95.48
cd01488	291	Uba3_RUB Ubiquitin activating enzyme (E1) subunit	95.48
cd00300	300	LDH_like L-lactate dehydrogenase-like enzymes. Mem	95.46
PRK14852	989	hypothetical protein; Provisional	95.42
cd05282	323	ETR_like 2-enoyl thioester reductase-like. 2-enoyl	95.41
TIGR01772	312	MDH_euk_gproteo malate dehydrogenase, NAD-dependen	95.41
cd08289	326	MDR_yhfp_like Yhfp putative quinone oxidoreductase	95.41
cd01486	307	Apg7 Apg7 is an E1-like protein, that activates tw	95.39
cd08250	329	Mgc45594_like Mgc45594 gene product and other MDR	95.36
PLN02740	381	Alcohol dehydrogenase-like	95.33
cd05191	86	NAD_bind_amino_acid_DH NAD(P) binding domain of am	95.33
PTZ00354	334	alcohol dehydrogenase; Provisional	95.33
PRK14194	301	bifunctional 5,10-methylene-tetrahydrofolate dehyd	95.33
COG0039	313	Mdh Malate/lactate dehydrogenases [Energy producti	95.32
PRK03659	601	glutathione-regulated potassium-efflux system prot	95.31
PRK12480	330	D-lactate dehydrogenase; Provisional	95.29
cd08301	369	alcohol_DH_plants Plant alcohol dehydrogenase. NAD	95.29
PLN02586	360	probable cinnamyl alcohol dehydrogenase	95.26
KOG0023	360	consensus Alcohol dehydrogenase, class V [Secondar	95.23
PLN02306	386	hydroxypyruvate reductase	95.22
PF03807	96	F420_oxidored: NADP oxidoreductase coenzyme F420-d	95.19
COG1179	263	Dinucleotide-utilizing enzymes involved in molybdo	95.19
cd08241	323	QOR1 Quinone oxidoreductase (QOR). QOR catalyzes t	95.18
cd05286	320	QOR2 Quinone oxidoreductase (QOR). Quinone oxidore	95.13
PRK15469	312	ghrA bifunctional glyoxylate/hydroxypyruvate reduc	95.12
PLN02178	375	cinnamyl-alcohol dehydrogenase	95.12
cd08291	324	ETR_like_1 2-enoyl thioester reductase (ETR) like	95.1
cd08299	373	alcohol_DH_class_I_II_IV class I, II, IV alcohol d	95.09
PRK14175	286	bifunctional 5,10-methylene-tetrahydrofolate dehyd	95.08
COG2085	211	Predicted dinucleotide-binding enzymes [General fu	95.08
TIGR03840	213	TMPT_Se_Te thiopurine S-methyltransferase, Se/Te d	95.05
PRK14188	296	bifunctional 5,10-methylene-tetrahydrofolate dehyd	95.04
COG2130	340	Putative NADP-dependent oxidoreductases [General f	95.04
cd08230	355	glucose_DH Glucose dehydrogenase. Glucose dehydrog	95.01
TIGR00446	264	nop2p NOL1/NOP2/sun family putative RNA methylase.	94.96
PF10727	127	Rossmann-like: Rossmann-like domain; InterPro: IPR	94.93
TIGR01751	398	crot-CoA-red crotonyl-CoA reductase. The enzyme mo	94.93
TIGR00537	179	hemK_rel_arch HemK-related putative methylase. The	94.93
PRK13243	333	glyoxylate reductase; Reviewed	94.91
PRK13771	334	putative alcohol dehydrogenase; Provisional	94.89
cd08277	365	liver_alcohol_DH_like Liver alcohol dehydrogenase.	94.88
TIGR03451	358	mycoS_dep_FDH mycothiol-dependent formaldehyde deh	94.87
TIGR03201	349	dearomat_had 6-hydroxycyclohex-1-ene-1-carbonyl-Co	94.82
PF02882	160	THF_DHG_CYH_C: Tetrahydrofolate dehydrogenase/cycl	94.79
cd08281	371	liver_ADH_like1 Zinc-dependent alcohol dehydrogena	94.79
PRK07877	722	hypothetical protein; Provisional	94.77
PRK11207	197	tellurite resistance protein TehB; Provisional	94.76
cd08248	350	RTN4I1 Human Reticulon 4 Interacting Protein 1. Hu	94.76
cd05292	308	LDH_2 A subgroup of L-lactate dehydrogenases. L-la	94.73
PRK11873	272	arsM arsenite S-adenosylmethyltransferase; Reviewe	94.73

>KOG1205 consensus Predicted dehydrogenase [Secondary metabolites biosynthesis, transport and catabolism]

Probab=100.00  E-value=5.7e-42  Score=287.41  Aligned_cols=201  Identities=48%  Similarity=0.725  Sum_probs=184.7

Q ss_pred             ccccCCCCCEEEEcCCCChHHHHHHHHHHHcCCeEEEEeCCcchHHHHHHHHHhhCCCc-EEEEEccCCCHHHHHHHHHH
Q 044010           40 IFSEDVSGKVVIITGASSGIGEHLAYEYARRGACLALCARREKSLEEVADTAREIGSPD-VITIRADVSKVDDCRSLVEE  118 (248)
Q Consensus        40 ~~~~~~~~k~~lVtGg~~gIG~aia~~l~~~G~~V~l~~r~~~~~~~~~~~l~~~~~~~-v~~~~~D~~~~~~~~~~~~~  118 (248)
                      ..++++.||+++|||+|+|||.++|++|+++|++++++.|...+++...+++++..... +..++||++|.+++++++++
T Consensus         5 ~~~e~~~~kvVvITGASsGIG~~lA~~la~~G~~l~lvar~~rrl~~v~~~l~~~~~~~~v~~~~~Dvs~~~~~~~~~~~   84 (282)
T KOG1205|consen    5 LFMERLAGKVVLITGASSGIGEALAYELAKRGAKLVLVARRARRLERVAEELRKLGSLEKVLVLQLDVSDEESVKKFVEW   84 (282)
T ss_pred             ccHHHhCCCEEEEeCCCcHHHHHHHHHHHhCCCceEEeehhhhhHHHHHHHHHHhCCcCccEEEeCccCCHHHHHHHHHH
Confidence            44578999999999999999999999999999999999999999999999998877655 99999999999999999999


Q ss_pred             HHhHcCCccEEEEccccCCcccccccCChHHHHHHHHhhhHHHHHHHHHHhhhhhhcC-CeEEEEcCccccccCCCCccc
Q 044010          119 TMNHFGRLDHLVNNAGISSVALFEDIVNITDFKQIMNINFWGSVYTTRFAVPHLRYTK-GKIVVLSSAASWLTAPRMSFY  197 (248)
Q Consensus       119 ~~~~~g~id~vv~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~-g~iV~isS~~~~~~~~~~~~Y  197 (248)
                      +.+++|++|++|||||... ..+.+..+.+++.+.|++|+.|++.+++.++|.|++++ |+||++||.+|..+.|..+.|
T Consensus        85 ~~~~fg~vDvLVNNAG~~~-~~~~~~~~~~~~~~~mdtN~~G~V~~Tk~alp~m~~r~~GhIVvisSiaG~~~~P~~~~Y  163 (282)
T KOG1205|consen   85 AIRHFGRVDVLVNNAGISL-VGFLEDTDIEDVRNVMDTNVFGTVYLTKAALPSMKKRNDGHIVVISSIAGKMPLPFRSIY  163 (282)
T ss_pred             HHHhcCCCCEEEecCcccc-ccccccCcHHHHHHHhhhhchhhHHHHHHHHHHhhhcCCCeEEEEeccccccCCCccccc
Confidence            9999999999999999988 55555578899999999999999999999999999877 999999999999999999999


Q ss_pred             hHHHHHHHHHHHHHHHHhCC-C--eEEEEEecCccccCcccccccccc
Q 044010          198 NASKAALVLFFETLRVELGS-D--VGVTIVTPGFIESELTQGKFLTGR  242 (248)
Q Consensus       198 ~~sKaal~~l~~~la~~~~~-~--i~v~~v~pg~v~T~~~~~~~~~~~  242 (248)
                      ++||+|+++|..+|+.|+.+ +  |++ +|+||+|+|++..+......
T Consensus       164 ~ASK~Al~~f~etLR~El~~~~~~i~i-~V~PG~V~Te~~~~~~~~~~  210 (282)
T KOG1205|consen  164 SASKHALEGFFETLRQELIPLGTIIII-LVSPGPIETEFTGKELLGEE  210 (282)
T ss_pred             chHHHHHHHHHHHHHHHhhccCceEEE-EEecCceeecccchhhcccc
Confidence            99999999999999999976 2  677 99999999998777665543

>COG0300 DltE Short-chain dehydrogenases of various substrate specificities [General function prediction only]

Probab=100.00  E-value=1.4e-41  Score=283.08  Aligned_cols=192  Identities=36%  Similarity=0.509  Sum_probs=182.6

Q ss_pred             cCCCCCEEEEcCCCChHHHHHHHHHHHcCCeEEEEeCCcchHHHHHHHHHhhCCCcEEEEEccCCCHHHHHHHHHHHHhH
Q 044010           43 EDVSGKVVIITGASSGIGEHLAYEYARRGACLALCARREKSLEEVADTAREIGSPDVITIRADVSKVDDCRSLVEETMNH  122 (248)
Q Consensus        43 ~~~~~k~~lVtGg~~gIG~aia~~l~~~G~~V~l~~r~~~~~~~~~~~l~~~~~~~v~~~~~D~~~~~~~~~~~~~~~~~  122 (248)
                      ..+++|+++|||+|+|||+++|++|+++|++|++++|+.+++++..+++++..+.+++++.+|+++.++++++.+++.++
T Consensus         2 ~~~~~~~~lITGASsGIG~~~A~~lA~~g~~liLvaR~~~kL~~la~~l~~~~~v~v~vi~~DLs~~~~~~~l~~~l~~~   81 (265)
T COG0300           2 GPMKGKTALITGASSGIGAELAKQLARRGYNLILVARREDKLEALAKELEDKTGVEVEVIPADLSDPEALERLEDELKER   81 (265)
T ss_pred             CCCCCcEEEEECCCchHHHHHHHHHHHCCCEEEEEeCcHHHHHHHHHHHHHhhCceEEEEECcCCChhHHHHHHHHHHhc
Confidence            46789999999999999999999999999999999999999999999999888778999999999999999999999999


Q ss_pred             cCCccEEEEccccCCcccccccCChHHHHHHHHhhhHHHHHHHHHHhhhhhhc-CCeEEEEcCccccccCCCCccchHHH
Q 044010          123 FGRLDHLVNNAGISSVALFEDIVNITDFKQIMNINFWGSVYTTRFAVPHLRYT-KGKIVVLSSAASWLTAPRMSFYNASK  201 (248)
Q Consensus       123 ~g~id~vv~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~-~g~iV~isS~~~~~~~~~~~~Y~~sK  201 (248)
                      .++||++|||||+...+++.+ +++++.++++++|+.++..++++++|.|.++ +|+|||++|.++..+.|.++.|++||
T Consensus        82 ~~~IdvLVNNAG~g~~g~f~~-~~~~~~~~mi~lN~~a~~~LT~~~lp~m~~~~~G~IiNI~S~ag~~p~p~~avY~ATK  160 (265)
T COG0300          82 GGPIDVLVNNAGFGTFGPFLE-LSLDEEEEMIQLNILALTRLTKAVLPGMVERGAGHIINIGSAAGLIPTPYMAVYSATK  160 (265)
T ss_pred             CCcccEEEECCCcCCccchhh-CChHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCceEEEEechhhcCCCcchHHHHHHH
Confidence            899999999999998887777 6889999999999999999999999998755 59999999999999999999999999


Q ss_pred             HHHHHHHHHHHHHhCC-CeEEEEEecCccccCccc
Q 044010          202 AALVLFFETLRVELGS-DVGVTIVTPGFIESELTQ  235 (248)
Q Consensus       202 aal~~l~~~la~~~~~-~i~v~~v~pg~v~T~~~~  235 (248)
                      +++.+|+++|+.|+++ +|+|.+|+||++.|++++
T Consensus       161 a~v~~fSeaL~~EL~~~gV~V~~v~PG~~~T~f~~  195 (265)
T COG0300         161 AFVLSFSEALREELKGTGVKVTAVCPGPTRTEFFD  195 (265)
T ss_pred             HHHHHHHHHHHHHhcCCCeEEEEEecCcccccccc
Confidence            9999999999999977 499999999999999996

>COG4221 Short-chain alcohol dehydrogenase of unknown specificity [General function prediction only]

Probab=100.00  E-value=3.5e-41  Score=273.72  Aligned_cols=193  Identities=35%  Similarity=0.512  Sum_probs=177.7

Q ss_pred             CCCCCEEEEcCCCChHHHHHHHHHHHcCCeEEEEeCCcchHHHHHHHHHhhCCCcEEEEEccCCCHHHHHHHHHHHHhHc
Q 044010           44 DVSGKVVIITGASSGIGEHLAYEYARRGACLALCARREKSLEEVADTAREIGSPDVITIRADVSKVDDCRSLVEETMNHF  123 (248)
Q Consensus        44 ~~~~k~~lVtGg~~gIG~aia~~l~~~G~~V~l~~r~~~~~~~~~~~l~~~~~~~v~~~~~D~~~~~~~~~~~~~~~~~~  123 (248)
                      .+++|+++|||+|+|||.++|++|+++|++|++++|+.+++++..+++.+   .++..+..|++|.++++++++.+.+++
T Consensus         3 ~~~~kv~lITGASSGiG~A~A~~l~~~G~~vvl~aRR~drL~~la~~~~~---~~~~~~~~DVtD~~~~~~~i~~~~~~~   79 (246)
T COG4221           3 TLKGKVALITGASSGIGEATARALAEAGAKVVLAARREERLEALADEIGA---GAALALALDVTDRAAVEAAIEALPEEF   79 (246)
T ss_pred             CCCCcEEEEecCcchHHHHHHHHHHHCCCeEEEEeccHHHHHHHHHhhcc---CceEEEeeccCCHHHHHHHHHHHHHhh
Confidence            56789999999999999999999999999999999999999999998876   378899999999999999999999999


Q ss_pred             CCccEEEEccccCCcccccccCChHHHHHHHHhhhHHHHHHHHHHhhhhhhcC-CeEEEEcCccccccCCCCccchHHHH
Q 044010          124 GRLDHLVNNAGISSVALFEDIVNITDFKQIMNINFWGSVYTTRFAVPHLRYTK-GKIVVLSSAASWLTAPRMSFYNASKA  202 (248)
Q Consensus       124 g~id~vv~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~-g~iV~isS~~~~~~~~~~~~Y~~sKa  202 (248)
                      +++|++|||||.....+..+ .+.++|++++++|+.|.++.+++++|.|.+++ |+|||+||.+|..++|+.+.|+++|+
T Consensus        80 g~iDiLvNNAGl~~g~~~~~-~~~~dw~~Mid~Ni~G~l~~~~avLP~m~~r~~G~IiN~~SiAG~~~y~~~~vY~ATK~  158 (246)
T COG4221          80 GRIDILVNNAGLALGDPLDE-ADLDDWDRMIDTNVKGLLNGTRAVLPGMVERKSGHIINLGSIAGRYPYPGGAVYGATKA  158 (246)
T ss_pred             CcccEEEecCCCCcCChhhh-CCHHHHHHHHHHHHHHHHHHHHHhhhHHHhcCCceEEEeccccccccCCCCccchhhHH
Confidence            99999999999987755555 68899999999999999999999999998665 89999999999999999999999999


Q ss_pred             HHHHHHHHHHHHhCC-CeEEEEEecCccccCcccccccc
Q 044010          203 ALVLFFETLRVELGS-DVGVTIVTPGFIESELTQGKFLT  240 (248)
Q Consensus       203 al~~l~~~la~~~~~-~i~v~~v~pg~v~T~~~~~~~~~  240 (248)
                      ++.+++..|+.|+.. +|||.+|+||.|.|........+
T Consensus       159 aV~~fs~~LR~e~~g~~IRVt~I~PG~v~~~~~s~v~~~  197 (246)
T COG4221         159 AVRAFSLGLRQELAGTGIRVTVISPGLVETTEFSTVRFE  197 (246)
T ss_pred             HHHHHHHHHHHHhcCCCeeEEEecCceecceecccccCC
Confidence            999999999999976 59999999999987766655444

>KOG1201 consensus Hydroxysteroid 17-beta dehydrogenase 11 [Secondary metabolites biosynthesis, transport and catabolism]

Probab=100.00  E-value=9.6e-39  Score=265.96  Aligned_cols=193  Identities=33%  Similarity=0.497  Sum_probs=181.7

Q ss_pred             cccCCCCCEEEEcCCCChHHHHHHHHHHHcCCeEEEEeCCcchHHHHHHHHHhhCCCcEEEEEccCCCHHHHHHHHHHHH
Q 044010           41 FSEDVSGKVVIITGASSGIGEHLAYEYARRGACLALCARREKSLEEVADTAREIGSPDVITIRADVSKVDDCRSLVEETM  120 (248)
Q Consensus        41 ~~~~~~~k~~lVtGg~~gIG~aia~~l~~~G~~V~l~~r~~~~~~~~~~~l~~~~~~~v~~~~~D~~~~~~~~~~~~~~~  120 (248)
                      ...+.+|+++|||||++|+|+++|.+||++|+++++.|.|.+..++..+++++.+  +++.+.||+++.+++.+..++++
T Consensus        32 ~~k~v~g~~vLITGgg~GlGr~ialefa~rg~~~vl~Din~~~~~etv~~~~~~g--~~~~y~cdis~~eei~~~a~~Vk  109 (300)
T KOG1201|consen   32 PLKSVSGEIVLITGGGSGLGRLIALEFAKRGAKLVLWDINKQGNEETVKEIRKIG--EAKAYTCDISDREEIYRLAKKVK  109 (300)
T ss_pred             chhhccCCEEEEeCCCchHHHHHHHHHHHhCCeEEEEeccccchHHHHHHHHhcC--ceeEEEecCCCHHHHHHHHHHHH
Confidence            4468999999999999999999999999999999999999999999999998774  89999999999999999999999


Q ss_pred             hHcCCccEEEEccccCCcccccccCChHHHHHHHHhhhHHHHHHHHHHhhhhhh-cCCeEEEEcCccccccCCCCccchH
Q 044010          121 NHFGRLDHLVNNAGISSVALFEDIVNITDFKQIMNINFWGSVYTTRFAVPHLRY-TKGKIVVLSSAASWLTAPRMSFYNA  199 (248)
Q Consensus       121 ~~~g~id~vv~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~-~~g~iV~isS~~~~~~~~~~~~Y~~  199 (248)
                      ++.|+||++|||||+...+++.+ .+.+++++++++|+.|++...|+|+|.|.+ +.|+||+++|.+|..+.++...|++
T Consensus       110 ~e~G~V~ILVNNAGI~~~~~ll~-~~d~ei~k~~~vN~~~~f~t~kaFLP~M~~~~~GHIV~IaS~aG~~g~~gl~~Yca  188 (300)
T KOG1201|consen  110 KEVGDVDILVNNAGIVTGKKLLD-CSDEEIQKTFDVNTIAHFWTTKAFLPKMLENNNGHIVTIASVAGLFGPAGLADYCA  188 (300)
T ss_pred             HhcCCceEEEeccccccCCCccC-CCHHHHHHHHHHhhHHHHHHHHHHhHHHHhcCCceEEEehhhhcccCCccchhhhh
Confidence            99999999999999999888888 477999999999999999999999999875 5699999999999999999999999


Q ss_pred             HHHHHHHHHHHHHHHhC---CC-eEEEEEecCccccCcccc
Q 044010          200 SKAALVLFFETLRVELG---SD-VGVTIVTPGFIESELTQG  236 (248)
Q Consensus       200 sKaal~~l~~~la~~~~---~~-i~v~~v~pg~v~T~~~~~  236 (248)
                      ||+|+.++.++|..|+.   .+ |+..+|+|+.++|+|.+.
T Consensus       189 SK~a~vGfhesL~~EL~~~~~~~IktTlv~P~~i~Tgmf~~  229 (300)
T KOG1201|consen  189 SKFAAVGFHESLSMELRALGKDGIKTTLVCPYFINTGMFDG  229 (300)
T ss_pred             hHHHHHHHHHHHHHHHHhcCCCCeeEEEEeeeeccccccCC
Confidence            99999999999999993   34 999999999999999986

>PRK08339 short chain dehydrogenase; Provisional

Probab=100.00  E-value=5.8e-39  Score=272.01  Aligned_cols=192  Identities=28%  Similarity=0.409  Sum_probs=173.6

Q ss_pred             cCCCCCEEEEcCCCChHHHHHHHHHHHcCCeEEEEeCCcchHHHHHHHHHhhCCCcEEEEEccCCCHHHHHHHHHHHHhH
Q 044010           43 EDVSGKVVIITGASSGIGEHLAYEYARRGACLALCARREKSLEEVADTAREIGSPDVITIRADVSKVDDCRSLVEETMNH  122 (248)
Q Consensus        43 ~~~~~k~~lVtGg~~gIG~aia~~l~~~G~~V~l~~r~~~~~~~~~~~l~~~~~~~v~~~~~D~~~~~~~~~~~~~~~~~  122 (248)
                      .+++||++|||||++|||+++|++|+++|++|++++|+.+++++..+++++..+.++.++.+|++|.++++++++++. +
T Consensus         4 ~~l~~k~~lItGas~gIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~i~~~~~~~~-~   82 (263)
T PRK08339          4 IDLSGKLAFTTASSKGIGFGVARVLARAGADVILLSRNEENLKKAREKIKSESNVDVSYIVADLTKREDLERTVKELK-N   82 (263)
T ss_pred             cCCCCCEEEEeCCCCcHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhhcCCceEEEEecCCCHHHHHHHHHHHH-h
Confidence            468999999999999999999999999999999999998888888877766544578899999999999999999985 6


Q ss_pred             cCCccEEEEccccCCcccccccCChHHHHHHHHhhhHHHHHHHHHHhhhhhhcC-CeEEEEcCccccccCCCCccchHHH
Q 044010          123 FGRLDHLVNNAGISSVALFEDIVNITDFKQIMNINFWGSVYTTRFAVPHLRYTK-GKIVVLSSAASWLTAPRMSFYNASK  201 (248)
Q Consensus       123 ~g~id~vv~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~-g~iV~isS~~~~~~~~~~~~Y~~sK  201 (248)
                      +|++|++|||||...+.++.+ .+.++|++.+++|+.+++.++++++|.|++++ |+||++||.++..+.+.++.|+++|
T Consensus        83 ~g~iD~lv~nag~~~~~~~~~-~~~~~~~~~~~~n~~~~~~~~~~~l~~m~~~~~g~Ii~isS~~~~~~~~~~~~y~asK  161 (263)
T PRK08339         83 IGEPDIFFFSTGGPKPGYFME-MSMEDWEGAVKLLLYPAVYLTRALVPAMERKGFGRIIYSTSVAIKEPIPNIALSNVVR  161 (263)
T ss_pred             hCCCcEEEECCCCCCCCCccc-CCHHHHHHHHHHHhHHHHHHHHHHHHHHHHcCCCEEEEEcCccccCCCCcchhhHHHH
Confidence            899999999999876555554 57899999999999999999999999997554 8999999999998889999999999


Q ss_pred             HHHHHHHHHHHHHhCCC-eEEEEEecCccccCcccc
Q 044010          202 AALVLFFETLRVELGSD-VGVTIVTPGFIESELTQG  236 (248)
Q Consensus       202 aal~~l~~~la~~~~~~-i~v~~v~pg~v~T~~~~~  236 (248)
                      +|+++|+++++.|++++ ||||+|+||+++|+|...
T Consensus       162 aal~~l~~~la~el~~~gIrVn~v~PG~v~T~~~~~  197 (263)
T PRK08339        162 ISMAGLVRTLAKELGPKGITVNGIMPGIIRTDRVIQ  197 (263)
T ss_pred             HHHHHHHHHHHHHhcccCeEEEEEEeCcCccHHHHH
Confidence            99999999999999875 999999999999998653

>PRK06079 enoyl-(acyl carrier protein) reductase; Provisional

Probab=100.00  E-value=6.7e-38  Score=263.87  Aligned_cols=189  Identities=18%  Similarity=0.274  Sum_probs=165.2

Q ss_pred             ccCCCCCEEEEcCCC--ChHHHHHHHHHHHcCCeEEEEeCCcchHHHHHHHHHhhCCCcEEEEEccCCCHHHHHHHHHHH
Q 044010           42 SEDVSGKVVIITGAS--SGIGEHLAYEYARRGACLALCARREKSLEEVADTAREIGSPDVITIRADVSKVDDCRSLVEET  119 (248)
Q Consensus        42 ~~~~~~k~~lVtGg~--~gIG~aia~~l~~~G~~V~l~~r~~~~~~~~~~~l~~~~~~~v~~~~~D~~~~~~~~~~~~~~  119 (248)
                      ...++||+++||||+  +|||+++|++|+++|++|++++|+. +.++..+++.   ..++.++++|++|.++++++++++
T Consensus         2 ~~~l~~k~~lItGas~~~gIG~a~a~~la~~G~~Vi~~~r~~-~~~~~~~~~~---~~~~~~~~~Dl~~~~~v~~~~~~~   77 (252)
T PRK06079          2 SGILSGKKIVVMGVANKRSIAWGCAQAIKDQGATVIYTYQND-RMKKSLQKLV---DEEDLLVECDVASDESIERAFATI   77 (252)
T ss_pred             ccccCCCEEEEeCCCCCCchHHHHHHHHHHCCCEEEEecCch-HHHHHHHhhc---cCceeEEeCCCCCHHHHHHHHHHH
Confidence            356889999999999  7999999999999999999999983 3343333332   236788999999999999999999


Q ss_pred             HhHcCCccEEEEccccCCc----ccccccCChHHHHHHHHhhhHHHHHHHHHHhhhhhhcCCeEEEEcCccccccCCCCc
Q 044010          120 MNHFGRLDHLVNNAGISSV----ALFEDIVNITDFKQIMNINFWGSVYTTRFAVPHLRYTKGKIVVLSSAASWLTAPRMS  195 (248)
Q Consensus       120 ~~~~g~id~vv~~ag~~~~----~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~g~iV~isS~~~~~~~~~~~  195 (248)
                      .+++|++|++|||||...+    .++.+ .+.++|++.+++|+.+++.+++.+.|.|. ++|+||++||..+..+.+.+.
T Consensus        78 ~~~~g~iD~lv~nAg~~~~~~~~~~~~~-~~~~~~~~~~~in~~~~~~l~~~~~~~~~-~~g~Iv~iss~~~~~~~~~~~  155 (252)
T PRK06079         78 KERVGKIDGIVHAIAYAKKEELGGNVTD-TSRDGYALAQDISAYSLIAVAKYARPLLN-PGASIVTLTYFGSERAIPNYN  155 (252)
T ss_pred             HHHhCCCCEEEEcccccccccccCCccc-CCHHHHHHHhCcccHHHHHHHHHHHHhcc-cCceEEEEeccCccccCCcch
Confidence            9999999999999998653    33333 57799999999999999999999999996 468999999999988888999


Q ss_pred             cchHHHHHHHHHHHHHHHHhCCC-eEEEEEecCccccCcccc
Q 044010          196 FYNASKAALVLFFETLRVELGSD-VGVTIVTPGFIESELTQG  236 (248)
Q Consensus       196 ~Y~~sKaal~~l~~~la~~~~~~-i~v~~v~pg~v~T~~~~~  236 (248)
                      +|++||+|+++|+++++.|++++ ||||+|+||+|+|++...
T Consensus       156 ~Y~asKaal~~l~~~la~el~~~gI~vn~i~PG~v~T~~~~~  197 (252)
T PRK06079        156 VMGIAKAALESSVRYLARDLGKKGIRVNAISAGAVKTLAVTG  197 (252)
T ss_pred             hhHHHHHHHHHHHHHHHHHhhhcCcEEEEEecCccccccccc
Confidence            99999999999999999999875 999999999999998654

>PRK06505 enoyl-(acyl carrier protein) reductase; Provisional

Probab=100.00  E-value=8.6e-38  Score=266.01  Aligned_cols=189  Identities=21%  Similarity=0.280  Sum_probs=163.2

Q ss_pred             cCCCCCEEEEcCCCC--hHHHHHHHHHHHcCCeEEEEeCCcchHHHHHHHHHhhCCCcEEEEEccCCCHHHHHHHHHHHH
Q 044010           43 EDVSGKVVIITGASS--GIGEHLAYEYARRGACLALCARREKSLEEVADTAREIGSPDVITIRADVSKVDDCRSLVEETM  120 (248)
Q Consensus        43 ~~~~~k~~lVtGg~~--gIG~aia~~l~~~G~~V~l~~r~~~~~~~~~~~l~~~~~~~v~~~~~D~~~~~~~~~~~~~~~  120 (248)
                      ..|++|++|||||++  |||+++|++|+++|++|++.+|+....+. .+++.+..+ ....+++|++|.++++++++++.
T Consensus         3 ~~l~~k~~lVTGas~~~GIG~aiA~~la~~Ga~V~~~~r~~~~~~~-~~~~~~~~g-~~~~~~~Dv~d~~~v~~~~~~~~   80 (271)
T PRK06505          3 GLMQGKRGLIMGVANDHSIAWGIAKQLAAQGAELAFTYQGEALGKR-VKPLAESLG-SDFVLPCDVEDIASVDAVFEALE   80 (271)
T ss_pred             cccCCCEEEEeCCCCCCcHHHHHHHHHHhCCCEEEEecCchHHHHH-HHHHHHhcC-CceEEeCCCCCHHHHHHHHHHHH
Confidence            357899999999996  99999999999999999999997643333 333332222 23578999999999999999999


Q ss_pred             hHcCCccEEEEccccCCc----ccccccCChHHHHHHHHhhhHHHHHHHHHHhhhhhhcCCeEEEEcCccccccCCCCcc
Q 044010          121 NHFGRLDHLVNNAGISSV----ALFEDIVNITDFKQIMNINFWGSVYTTRFAVPHLRYTKGKIVVLSSAASWLTAPRMSF  196 (248)
Q Consensus       121 ~~~g~id~vv~~ag~~~~----~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~g~iV~isS~~~~~~~~~~~~  196 (248)
                      +++|++|++|||||....    .++.+ .+.++|++.+++|+.+++.++|++.|.|. ++|+||++||..+..+.+.+.+
T Consensus        81 ~~~g~iD~lVnnAG~~~~~~~~~~~~~-~~~~~~~~~~~vn~~~~~~l~~~~~~~m~-~~G~Iv~isS~~~~~~~~~~~~  158 (271)
T PRK06505         81 KKWGKLDFVVHAIGFSDKNELKGRYAD-TTRENFSRTMVISCFSFTEIAKRAAKLMP-DGGSMLTLTYGGSTRVMPNYNV  158 (271)
T ss_pred             HHhCCCCEEEECCccCCCccccCChhh-cCHHHHHHHHhhhhhhHHHHHHHHHHhhc-cCceEEEEcCCCccccCCccch
Confidence            999999999999997643    23333 57899999999999999999999999997 4689999999999888889999


Q ss_pred             chHHHHHHHHHHHHHHHHhCCC-eEEEEEecCccccCccc
Q 044010          197 YNASKAALVLFFETLRVELGSD-VGVTIVTPGFIESELTQ  235 (248)
Q Consensus       197 Y~~sKaal~~l~~~la~~~~~~-i~v~~v~pg~v~T~~~~  235 (248)
                      |++||+|+++|+++++.|++++ ||||+|+||+++|++..
T Consensus       159 Y~asKaAl~~l~r~la~el~~~gIrVn~v~PG~i~T~~~~  198 (271)
T PRK06505        159 MGVAKAALEASVRYLAADYGPQGIRVNAISAGPVRTLAGA  198 (271)
T ss_pred             hhhhHHHHHHHHHHHHHHHhhcCeEEEEEecCCccccccc
Confidence            9999999999999999999885 99999999999999864

>PRK08415 enoyl-(acyl carrier protein) reductase; Provisional

Probab=100.00  E-value=8.6e-38  Score=266.38  Aligned_cols=189  Identities=24%  Similarity=0.311  Sum_probs=163.0

Q ss_pred             cCCCCCEEEEcCCC--ChHHHHHHHHHHHcCCeEEEEeCCcchHHHHHHHHHhhCCCcEEEEEccCCCHHHHHHHHHHHH
Q 044010           43 EDVSGKVVIITGAS--SGIGEHLAYEYARRGACLALCARREKSLEEVADTAREIGSPDVITIRADVSKVDDCRSLVEETM  120 (248)
Q Consensus        43 ~~~~~k~~lVtGg~--~gIG~aia~~l~~~G~~V~l~~r~~~~~~~~~~~l~~~~~~~v~~~~~D~~~~~~~~~~~~~~~  120 (248)
                      |.++||+++||||+  +|||+++|++|+++|++|++.+|+.+ .++..+++.+..+.. ..+++|++|.++++++++++.
T Consensus         1 ~~l~~k~~lItGas~~~GIG~aiA~~la~~G~~Vil~~r~~~-~~~~~~~~~~~~~~~-~~~~~Dv~d~~~v~~~~~~i~   78 (274)
T PRK08415          1 MIMKGKKGLIVGVANNKSIAYGIAKACFEQGAELAFTYLNEA-LKKRVEPIAQELGSD-YVYELDVSKPEHFKSLAESLK   78 (274)
T ss_pred             CccCCcEEEEECCCCCCCHHHHHHHHHHHCCCEEEEEecCHH-HHHHHHHHHHhcCCc-eEEEecCCCHHHHHHHHHHHH
Confidence            35789999999997  79999999999999999999999853 233334443322223 678999999999999999999


Q ss_pred             hHcCCccEEEEccccCCc----ccccccCChHHHHHHHHhhhHHHHHHHHHHhhhhhhcCCeEEEEcCccccccCCCCcc
Q 044010          121 NHFGRLDHLVNNAGISSV----ALFEDIVNITDFKQIMNINFWGSVYTTRFAVPHLRYTKGKIVVLSSAASWLTAPRMSF  196 (248)
Q Consensus       121 ~~~g~id~vv~~ag~~~~----~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~g~iV~isS~~~~~~~~~~~~  196 (248)
                      +++|++|++|||||...+    .++.+ .+.++|++.+++|+.+++.+++.++|.|.+ +|+||++||.++..+.+.+..
T Consensus        79 ~~~g~iDilVnnAG~~~~~~~~~~~~~-~~~~~~~~~~~vN~~g~~~l~~~~~p~m~~-~g~Iv~isS~~~~~~~~~~~~  156 (274)
T PRK08415         79 KDLGKIDFIVHSVAFAPKEALEGSFLE-TSKEAFNIAMEISVYSLIELTRALLPLLND-GASVLTLSYLGGVKYVPHYNV  156 (274)
T ss_pred             HHcCCCCEEEECCccCccccccccccc-CCHHHHHHHhhhhhHHHHHHHHHHHHHhcc-CCcEEEEecCCCccCCCcchh
Confidence            999999999999997643    33333 578999999999999999999999999964 589999999999888888999


Q ss_pred             chHHHHHHHHHHHHHHHHhCCC-eEEEEEecCccccCccc
Q 044010          197 YNASKAALVLFFETLRVELGSD-VGVTIVTPGFIESELTQ  235 (248)
Q Consensus       197 Y~~sKaal~~l~~~la~~~~~~-i~v~~v~pg~v~T~~~~  235 (248)
                      |++||+|+.+|+++++.|+++. ||||+|+||+|+|++..
T Consensus       157 Y~asKaal~~l~~~la~el~~~gIrVn~v~PG~v~T~~~~  196 (274)
T PRK08415        157 MGVAKAALESSVRYLAVDLGKKGIRVNAISAGPIKTLAAS  196 (274)
T ss_pred             hhhHHHHHHHHHHHHHHHhhhcCeEEEEEecCccccHHHh
Confidence            9999999999999999999874 99999999999998865

>PRK08589 short chain dehydrogenase; Validated

Probab=100.00  E-value=1.7e-37  Score=264.12  Aligned_cols=191  Identities=28%  Similarity=0.463  Sum_probs=172.4

Q ss_pred             CCCCCEEEEcCCCChHHHHHHHHHHHcCCeEEEEeCCcchHHHHHHHHHhhCCCcEEEEEccCCCHHHHHHHHHHHHhHc
Q 044010           44 DVSGKVVIITGASSGIGEHLAYEYARRGACLALCARREKSLEEVADTAREIGSPDVITIRADVSKVDDCRSLVEETMNHF  123 (248)
Q Consensus        44 ~~~~k~~lVtGg~~gIG~aia~~l~~~G~~V~l~~r~~~~~~~~~~~l~~~~~~~v~~~~~D~~~~~~~~~~~~~~~~~~  123 (248)
                      ++++|++|||||++|||++++++|+++|++|++++|+ ++.++..+++++.+. ++..+.+|+++.++++++++++.+++
T Consensus         3 ~l~~k~vlItGas~gIG~aia~~l~~~G~~vi~~~r~-~~~~~~~~~~~~~~~-~~~~~~~Dl~~~~~~~~~~~~~~~~~   80 (272)
T PRK08589          3 RLENKVAVITGASTGIGQASAIALAQEGAYVLAVDIA-EAVSETVDKIKSNGG-KAKAYHVDISDEQQVKDFASEIKEQF   80 (272)
T ss_pred             CCCCCEEEEECCCchHHHHHHHHHHHCCCEEEEEeCc-HHHHHHHHHHHhcCC-eEEEEEeecCCHHHHHHHHHHHHHHc
Confidence            5789999999999999999999999999999999999 777777777765443 68899999999999999999999999


Q ss_pred             CCccEEEEccccCCc-ccccccCChHHHHHHHHhhhHHHHHHHHHHhhhhhhcCCeEEEEcCccccccCCCCccchHHHH
Q 044010          124 GRLDHLVNNAGISSV-ALFEDIVNITDFKQIMNINFWGSVYTTRFAVPHLRYTKGKIVVLSSAASWLTAPRMSFYNASKA  202 (248)
Q Consensus       124 g~id~vv~~ag~~~~-~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~g~iV~isS~~~~~~~~~~~~Y~~sKa  202 (248)
                      |++|++|||||.... .+..+ .+.++|++.+++|+.+++.+++.++|.|.+++|+||++||..+..+.+...+|++||+
T Consensus        81 g~id~li~~Ag~~~~~~~~~~-~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~g~iv~isS~~~~~~~~~~~~Y~asKa  159 (272)
T PRK08589         81 GRVDVLFNNAGVDNAAGRIHE-YPVDVFDKIMAVDMRGTFLMTKMLLPLMMEQGGSIINTSSFSGQAADLYRSGYNAAKG  159 (272)
T ss_pred             CCcCEEEECCCCCCCCCCccc-CCHHHHHHHHHHHhHHHHHHHHHHHHHHHHcCCEEEEeCchhhcCCCCCCchHHHHHH
Confidence            999999999998653 33333 5779999999999999999999999999877799999999999988888999999999


Q ss_pred             HHHHHHHHHHHHhCCC-eEEEEEecCccccCccccc
Q 044010          203 ALVLFFETLRVELGSD-VGVTIVTPGFIESELTQGK  237 (248)
Q Consensus       203 al~~l~~~la~~~~~~-i~v~~v~pg~v~T~~~~~~  237 (248)
                      |++++++++++|+++. ||||+|+||+|+|++.+..
T Consensus       160 al~~l~~~la~e~~~~gI~v~~v~PG~v~T~~~~~~  195 (272)
T PRK08589        160 AVINFTKSIAIEYGRDGIRANAIAPGTIETPLVDKL  195 (272)
T ss_pred             HHHHHHHHHHHHhhhcCeEEEEEecCcccCchhhhh
Confidence            9999999999999874 9999999999999987643

>PRK08690 enoyl-(acyl carrier protein) reductase; Provisional

Probab=100.00  E-value=1e-37  Score=264.07  Aligned_cols=191  Identities=23%  Similarity=0.279  Sum_probs=164.8

Q ss_pred             CCCCCEEEEcCC--CChHHHHHHHHHHHcCCeEEEEeCCcchHHHHHHHHHhhCCCcEEEEEccCCCHHHHHHHHHHHHh
Q 044010           44 DVSGKVVIITGA--SSGIGEHLAYEYARRGACLALCARREKSLEEVADTAREIGSPDVITIRADVSKVDDCRSLVEETMN  121 (248)
Q Consensus        44 ~~~~k~~lVtGg--~~gIG~aia~~l~~~G~~V~l~~r~~~~~~~~~~~l~~~~~~~v~~~~~D~~~~~~~~~~~~~~~~  121 (248)
                      .++||+++||||  ++|||+++|++|+++|++|++.+|+. +.++..+++.+..+ ....++||++|.++++++++++.+
T Consensus         3 ~~~~k~~lITGa~~~~GIG~a~a~~l~~~G~~v~~~~~~~-~~~~~~~~~~~~~~-~~~~~~~Dv~~~~~v~~~~~~~~~   80 (261)
T PRK08690          3 FLQGKKILITGMISERSIAYGIAKACREQGAELAFTYVVD-KLEERVRKMAAELD-SELVFRCDVASDDEINQVFADLGK   80 (261)
T ss_pred             ccCCcEEEEECCCCCCcHHHHHHHHHHHCCCEEEEEcCcH-HHHHHHHHHHhccC-CceEEECCCCCHHHHHHHHHHHHH
Confidence            578999999997  67999999999999999999988863 33444455544333 345789999999999999999999


Q ss_pred             HcCCccEEEEccccCCcc----cccccCChHHHHHHHHhhhHHHHHHHHHHhhhhhhcCCeEEEEcCccccccCCCCccc
Q 044010          122 HFGRLDHLVNNAGISSVA----LFEDIVNITDFKQIMNINFWGSVYTTRFAVPHLRYTKGKIVVLSSAASWLTAPRMSFY  197 (248)
Q Consensus       122 ~~g~id~vv~~ag~~~~~----~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~g~iV~isS~~~~~~~~~~~~Y  197 (248)
                      ++|++|++|||||.....    +..+..+.++|+..+++|+.+++.+++++.|.|++++|+||++||..+..+.+++..|
T Consensus        81 ~~g~iD~lVnnAG~~~~~~~~~~~~~~~~~~~~~~~~~vn~~~~~~l~~~~~p~m~~~~g~Iv~iss~~~~~~~~~~~~Y  160 (261)
T PRK08690         81 HWDGLDGLVHSIGFAPKEALSGDFLDSISREAFNTAHEISAYSLPALAKAARPMMRGRNSAIVALSYLGAVRAIPNYNVM  160 (261)
T ss_pred             HhCCCcEEEECCccCCccccccchhhhcCHHHHHHHHHhchHHHHHHHHHHHHHhhhcCcEEEEEcccccccCCCCcccc
Confidence            999999999999986532    2223356789999999999999999999999997667899999999998888999999


Q ss_pred             hHHHHHHHHHHHHHHHHhCCC-eEEEEEecCccccCcccc
Q 044010          198 NASKAALVLFFETLRVELGSD-VGVTIVTPGFIESELTQG  236 (248)
Q Consensus       198 ~~sKaal~~l~~~la~~~~~~-i~v~~v~pg~v~T~~~~~  236 (248)
                      ++||+|+++|+++++.|++++ ||||+|+||+++|++...
T Consensus       161 ~asKaal~~l~~~la~e~~~~gIrVn~i~PG~v~T~~~~~  200 (261)
T PRK08690        161 GMAKASLEAGIRFTAACLGKEGIRCNGISAGPIKTLAASG  200 (261)
T ss_pred             hhHHHHHHHHHHHHHHHhhhcCeEEEEEecCcccchhhhc
Confidence            999999999999999999885 999999999999998654

>PRK12481 2-deoxy-D-gluconate 3-dehydrogenase; Provisional

Probab=100.00  E-value=2.1e-37  Score=260.60  Aligned_cols=191  Identities=28%  Similarity=0.421  Sum_probs=168.6

Q ss_pred             cCCCCCEEEEcCCCChHHHHHHHHHHHcCCeEEEEeCCcchHHHHHHHHHhhCCCcEEEEEccCCCHHHHHHHHHHHHhH
Q 044010           43 EDVSGKVVIITGASSGIGEHLAYEYARRGACLALCARREKSLEEVADTAREIGSPDVITIRADVSKVDDCRSLVEETMNH  122 (248)
Q Consensus        43 ~~~~~k~~lVtGg~~gIG~aia~~l~~~G~~V~l~~r~~~~~~~~~~~l~~~~~~~v~~~~~D~~~~~~~~~~~~~~~~~  122 (248)
                      ++++||+++||||++|||+++|++|+++|++|++++|+..  ++..+++++.+ .++.++.+|++++++++++++++.+.
T Consensus         4 ~~l~~k~~lItGas~gIG~aia~~l~~~G~~vv~~~~~~~--~~~~~~~~~~~-~~~~~~~~Dl~~~~~~~~~~~~~~~~   80 (251)
T PRK12481          4 FDLNGKVAIITGCNTGLGQGMAIGLAKAGADIVGVGVAEA--PETQAQVEALG-RKFHFITADLIQQKDIDSIVSQAVEV   80 (251)
T ss_pred             cccCCCEEEEeCCCchHHHHHHHHHHHCCCEEEEecCchH--HHHHHHHHHcC-CeEEEEEeCCCCHHHHHHHHHHHHHH
Confidence            4688999999999999999999999999999999988642  34444454443 47889999999999999999999999


Q ss_pred             cCCccEEEEccccCCcccccccCChHHHHHHHHhhhHHHHHHHHHHhhhhhhc--CCeEEEEcCccccccCCCCccchHH
Q 044010          123 FGRLDHLVNNAGISSVALFEDIVNITDFKQIMNINFWGSVYTTRFAVPHLRYT--KGKIVVLSSAASWLTAPRMSFYNAS  200 (248)
Q Consensus       123 ~g~id~vv~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~--~g~iV~isS~~~~~~~~~~~~Y~~s  200 (248)
                      +|++|++|||||.....+..+ .+.++|++.+++|+.+++.+++++.|.|.++  +|+||++||..+..+.+..++|++|
T Consensus        81 ~g~iD~lv~~ag~~~~~~~~~-~~~~~~~~~~~vN~~~~~~l~~~~~~~~~~~~~~g~ii~isS~~~~~~~~~~~~Y~as  159 (251)
T PRK12481         81 MGHIDILINNAGIIRRQDLLE-FGNKDWDDVININQKTVFFLSQAVAKQFVKQGNGGKIINIASMLSFQGGIRVPSYTAS  159 (251)
T ss_pred             cCCCCEEEECCCcCCCCCccc-CCHHHHHHHheeCcHHHHHHHHHHHHHHHHcCCCCEEEEeCChhhcCCCCCCcchHHH
Confidence            999999999999876655554 5789999999999999999999999998654  4899999999999888888999999


Q ss_pred             HHHHHHHHHHHHHHhCCC-eEEEEEecCccccCccccc
Q 044010          201 KAALVLFFETLRVELGSD-VGVTIVTPGFIESELTQGK  237 (248)
Q Consensus       201 Kaal~~l~~~la~~~~~~-i~v~~v~pg~v~T~~~~~~  237 (248)
                      |+|+++++++++.|+++. ||||+|+||+++|++....
T Consensus       160 K~a~~~l~~~la~e~~~~girvn~v~PG~v~t~~~~~~  197 (251)
T PRK12481        160 KSAVMGLTRALATELSQYNINVNAIAPGYMATDNTAAL  197 (251)
T ss_pred             HHHHHHHHHHHHHHHhhcCeEEEEEecCCCccCchhhc
Confidence            999999999999999874 9999999999999987653

>PRK08594 enoyl-(acyl carrier protein) reductase; Provisional

Probab=100.00  E-value=2.9e-37  Score=260.78  Aligned_cols=190  Identities=17%  Similarity=0.215  Sum_probs=163.0

Q ss_pred             cCCCCCEEEEcCCC--ChHHHHHHHHHHHcCCeEEEEeCCcchHHHHHHHHHhh-CCCcEEEEEccCCCHHHHHHHHHHH
Q 044010           43 EDVSGKVVIITGAS--SGIGEHLAYEYARRGACLALCARREKSLEEVADTAREI-GSPDVITIRADVSKVDDCRSLVEET  119 (248)
Q Consensus        43 ~~~~~k~~lVtGg~--~gIG~aia~~l~~~G~~V~l~~r~~~~~~~~~~~l~~~-~~~~v~~~~~D~~~~~~~~~~~~~~  119 (248)
                      .+++||+++||||+  +|||+++|++|+++|++|++++|+.... +..+++.+. .+.++..+++|++|.++++++++++
T Consensus         3 ~~~~~k~~lItGa~~s~GIG~aia~~la~~G~~v~~~~r~~~~~-~~~~~~~~~~~~~~~~~~~~Dv~d~~~v~~~~~~~   81 (257)
T PRK08594          3 LSLEGKTYVVMGVANKRSIAWGIARSLHNAGAKLVFTYAGERLE-KEVRELADTLEGQESLLLPCDVTSDEEITACFETI   81 (257)
T ss_pred             cccCCCEEEEECCCCCCCHHHHHHHHHHHCCCEEEEecCcccch-HHHHHHHHHcCCCceEEEecCCCCHHHHHHHHHHH
Confidence            46889999999997  8999999999999999999998864222 222223222 2346888999999999999999999


Q ss_pred             HhHcCCccEEEEccccCCc----ccccccCChHHHHHHHHhhhHHHHHHHHHHhhhhhhcCCeEEEEcCccccccCCCCc
Q 044010          120 MNHFGRLDHLVNNAGISSV----ALFEDIVNITDFKQIMNINFWGSVYTTRFAVPHLRYTKGKIVVLSSAASWLTAPRMS  195 (248)
Q Consensus       120 ~~~~g~id~vv~~ag~~~~----~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~g~iV~isS~~~~~~~~~~~  195 (248)
                      .+++|++|++|||||....    .++.+ .+.++|+..+++|+.+++.+++.+.|.|.+ +|+||++||..+..+.+.+.
T Consensus        82 ~~~~g~ld~lv~nag~~~~~~~~~~~~~-~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~-~g~Iv~isS~~~~~~~~~~~  159 (257)
T PRK08594         82 KEEVGVIHGVAHCIAFANKEDLRGEFLE-TSRDGFLLAQNISAYSLTAVAREAKKLMTE-GGSIVTLTYLGGERVVQNYN  159 (257)
T ss_pred             HHhCCCccEEEECcccCCCCcCCCcccc-CCHHHHHHHHhhhHHHHHHHHHHHHHhccc-CceEEEEcccCCccCCCCCc
Confidence            9999999999999997642    23333 577999999999999999999999999964 68999999999998888999


Q ss_pred             cchHHHHHHHHHHHHHHHHhCCC-eEEEEEecCccccCccc
Q 044010          196 FYNASKAALVLFFETLRVELGSD-VGVTIVTPGFIESELTQ  235 (248)
Q Consensus       196 ~Y~~sKaal~~l~~~la~~~~~~-i~v~~v~pg~v~T~~~~  235 (248)
                      +|++||+|+++|+++++.|++++ ||||+|+||+++|++.+
T Consensus       160 ~Y~asKaal~~l~~~la~el~~~gIrvn~v~PG~v~T~~~~  200 (257)
T PRK08594        160 VMGVAKASLEASVKYLANDLGKDGIRVNAISAGPIRTLSAK  200 (257)
T ss_pred             hhHHHHHHHHHHHHHHHHHhhhcCCEEeeeecCcccCHhHh
Confidence            99999999999999999999874 99999999999999754

>PRK07063 short chain dehydrogenase; Provisional

Probab=100.00  E-value=3.6e-37  Score=260.04  Aligned_cols=194  Identities=29%  Similarity=0.443  Sum_probs=174.2

Q ss_pred             cCCCCCEEEEcCCCChHHHHHHHHHHHcCCeEEEEeCCcchHHHHHHHHHhh-CCCcEEEEEccCCCHHHHHHHHHHHHh
Q 044010           43 EDVSGKVVIITGASSGIGEHLAYEYARRGACLALCARREKSLEEVADTAREI-GSPDVITIRADVSKVDDCRSLVEETMN  121 (248)
Q Consensus        43 ~~~~~k~~lVtGg~~gIG~aia~~l~~~G~~V~l~~r~~~~~~~~~~~l~~~-~~~~v~~~~~D~~~~~~~~~~~~~~~~  121 (248)
                      .++++|+++||||++|||++++++|+++|++|++++|+.++.++..+++++. .+.++.++.+|++|+++++++++++.+
T Consensus         3 ~~l~~k~vlVtGas~gIG~~~a~~l~~~G~~vv~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~   82 (260)
T PRK07063          3 NRLAGKVALVTGAAQGIGAAIARAFAREGAAVALADLDAALAERAAAAIARDVAGARVLAVPADVTDAASVAAAVAAAEE   82 (260)
T ss_pred             cccCCCEEEEECCCchHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhccCCceEEEEEccCCCHHHHHHHHHHHHH
Confidence            3688999999999999999999999999999999999998888888877653 234688999999999999999999999


Q ss_pred             HcCCccEEEEccccCCcccccccCChHHHHHHHHhhhHHHHHHHHHHhhhhhhc-CCeEEEEcCccccccCCCCccchHH
Q 044010          122 HFGRLDHLVNNAGISSVALFEDIVNITDFKQIMNINFWGSVYTTRFAVPHLRYT-KGKIVVLSSAASWLTAPRMSFYNAS  200 (248)
Q Consensus       122 ~~g~id~vv~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~-~g~iV~isS~~~~~~~~~~~~Y~~s  200 (248)
                      ++|++|++|||||.....+..+ .+.++|++.+++|+.+++.+++++.|.|.++ .|+||++||..+..+.++..+|++|
T Consensus        83 ~~g~id~li~~ag~~~~~~~~~-~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~g~iv~isS~~~~~~~~~~~~Y~~s  161 (260)
T PRK07063         83 AFGPLDVLVNNAGINVFADPLA-MTDEDWRRCFAVDLDGAWNGCRAVLPGMVERGRGSIVNIASTHAFKIIPGCFPYPVA  161 (260)
T ss_pred             HhCCCcEEEECCCcCCCCChhh-CCHHHHHHHHHhhhHHHHHHHHHHHHHHHhhCCeEEEEECChhhccCCCCchHHHHH
Confidence            9999999999999865554444 4679999999999999999999999998754 4899999999999888899999999


Q ss_pred             HHHHHHHHHHHHHHhCCC-eEEEEEecCccccCccccc
Q 044010          201 KAALVLFFETLRVELGSD-VGVTIVTPGFIESELTQGK  237 (248)
Q Consensus       201 Kaal~~l~~~la~~~~~~-i~v~~v~pg~v~T~~~~~~  237 (248)
                      |+|+++++++++.|+++. ||||+|+||+++|++....
T Consensus       162 Kaa~~~~~~~la~el~~~gIrvn~v~PG~v~t~~~~~~  199 (260)
T PRK07063        162 KHGLLGLTRALGIEYAARNVRVNAIAPGYIETQLTEDW  199 (260)
T ss_pred             HHHHHHHHHHHHHHhCccCeEEEEEeeCCccChhhhhh
Confidence            999999999999999874 9999999999999997643

>PRK07478 short chain dehydrogenase; Provisional

Probab=100.00  E-value=5.6e-37  Score=258.06  Aligned_cols=193  Identities=28%  Similarity=0.453  Sum_probs=172.5

Q ss_pred             cCCCCCEEEEcCCCChHHHHHHHHHHHcCCeEEEEeCCcchHHHHHHHHHhhCCCcEEEEEccCCCHHHHHHHHHHHHhH
Q 044010           43 EDVSGKVVIITGASSGIGEHLAYEYARRGACLALCARREKSLEEVADTAREIGSPDVITIRADVSKVDDCRSLVEETMNH  122 (248)
Q Consensus        43 ~~~~~k~~lVtGg~~gIG~aia~~l~~~G~~V~l~~r~~~~~~~~~~~l~~~~~~~v~~~~~D~~~~~~~~~~~~~~~~~  122 (248)
                      +++++|+++||||++|||.+++++|+++|++|++++|+.++.++..+++++.+. ++.++.+|+++.++++++++++.++
T Consensus         2 ~~~~~k~~lItGas~giG~~ia~~l~~~G~~v~~~~r~~~~~~~~~~~~~~~~~-~~~~~~~D~~~~~~~~~~~~~~~~~   80 (254)
T PRK07478          2 MRLNGKVAIITGASSGIGRAAAKLFAREGAKVVVGARRQAELDQLVAEIRAEGG-EAVALAGDVRDEAYAKALVALAVER   80 (254)
T ss_pred             CCCCCCEEEEeCCCChHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcCC-cEEEEEcCCCCHHHHHHHHHHHHHh
Confidence            468899999999999999999999999999999999999888888887776553 7889999999999999999999999


Q ss_pred             cCCccEEEEccccCCc-ccccccCChHHHHHHHHhhhHHHHHHHHHHhhhhhhc-CCeEEEEcCcccc-ccCCCCccchH
Q 044010          123 FGRLDHLVNNAGISSV-ALFEDIVNITDFKQIMNINFWGSVYTTRFAVPHLRYT-KGKIVVLSSAASW-LTAPRMSFYNA  199 (248)
Q Consensus       123 ~g~id~vv~~ag~~~~-~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~-~g~iV~isS~~~~-~~~~~~~~Y~~  199 (248)
                      ++++|++|||||...+ .+..+ .+.++|++.+++|+.+++.+.+.++|.|.+. .|+||++||..+. .+.++...|++
T Consensus        81 ~~~id~li~~ag~~~~~~~~~~-~~~~~~~~~~~~N~~~~~~~~~~~~~~l~~~~~~~iv~~sS~~~~~~~~~~~~~Y~~  159 (254)
T PRK07478         81 FGGLDIAFNNAGTLGEMGPVAE-MSLEGWRETLATNLTSAFLGAKHQIPAMLARGGGSLIFTSTFVGHTAGFPGMAAYAA  159 (254)
T ss_pred             cCCCCEEEECCCCCCCCCChhh-CCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcCCceEEEEechHhhccCCCCcchhHH
Confidence            9999999999998643 33333 5779999999999999999999999998755 4899999998886 56788899999


Q ss_pred             HHHHHHHHHHHHHHHhCC-CeEEEEEecCccccCccccc
Q 044010          200 SKAALVLFFETLRVELGS-DVGVTIVTPGFIESELTQGK  237 (248)
Q Consensus       200 sKaal~~l~~~la~~~~~-~i~v~~v~pg~v~T~~~~~~  237 (248)
                      ||++++.++++++.|+++ +|+||+|+||+++|+|.+..
T Consensus       160 sK~a~~~~~~~la~e~~~~gi~v~~v~PG~v~t~~~~~~  198 (254)
T PRK07478        160 SKAGLIGLTQVLAAEYGAQGIRVNALLPGGTDTPMGRAM  198 (254)
T ss_pred             HHHHHHHHHHHHHHHHhhcCEEEEEEeeCcccCcccccc
Confidence            999999999999999987 49999999999999987643

>PRK07533 enoyl-(acyl carrier protein) reductase; Provisional

Probab=100.00  E-value=4.3e-37  Score=259.79  Aligned_cols=191  Identities=20%  Similarity=0.278  Sum_probs=164.0

Q ss_pred             ccCCCCCEEEEcCCC--ChHHHHHHHHHHHcCCeEEEEeCCcchHHHHHHHHHhhCCCcEEEEEccCCCHHHHHHHHHHH
Q 044010           42 SEDVSGKVVIITGAS--SGIGEHLAYEYARRGACLALCARREKSLEEVADTAREIGSPDVITIRADVSKVDDCRSLVEET  119 (248)
Q Consensus        42 ~~~~~~k~~lVtGg~--~gIG~aia~~l~~~G~~V~l~~r~~~~~~~~~~~l~~~~~~~v~~~~~D~~~~~~~~~~~~~~  119 (248)
                      ..+++||+++||||+  +|||+++|++|+++|++|++++|+.+..+ ..+++.+..+ ...++.||++|.++++++++++
T Consensus         5 ~~~~~~k~~lItGas~g~GIG~a~a~~la~~G~~v~l~~r~~~~~~-~~~~~~~~~~-~~~~~~~D~~~~~~v~~~~~~~   82 (258)
T PRK07533          5 LLPLAGKRGLVVGIANEQSIAWGCARAFRALGAELAVTYLNDKARP-YVEPLAEELD-APIFLPLDVREPGQLEAVFARI   82 (258)
T ss_pred             ccccCCCEEEEECCCCCCcHHHHHHHHHHHcCCEEEEEeCChhhHH-HHHHHHHhhc-cceEEecCcCCHHHHHHHHHHH
Confidence            356899999999998  59999999999999999999999864322 2333333222 3567899999999999999999


Q ss_pred             HhHcCCccEEEEccccCCc----ccccccCChHHHHHHHHhhhHHHHHHHHHHhhhhhhcCCeEEEEcCccccccCCCCc
Q 044010          120 MNHFGRLDHLVNNAGISSV----ALFEDIVNITDFKQIMNINFWGSVYTTRFAVPHLRYTKGKIVVLSSAASWLTAPRMS  195 (248)
Q Consensus       120 ~~~~g~id~vv~~ag~~~~----~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~g~iV~isS~~~~~~~~~~~  195 (248)
                      .+++|++|++|||||....    .++.+ .+.++|++.+++|+.+++.+++.+.|.|+ ++|+||++||..+..+.+.+.
T Consensus        83 ~~~~g~ld~lv~nAg~~~~~~~~~~~~~-~~~~~~~~~~~vN~~~~~~~~~~~~p~m~-~~g~Ii~iss~~~~~~~~~~~  160 (258)
T PRK07533         83 AEEWGRLDFLLHSIAFAPKEDLHGRVVD-CSREGFALAMDVSCHSFIRMARLAEPLMT-NGGSLLTMSYYGAEKVVENYN  160 (258)
T ss_pred             HHHcCCCCEEEEcCccCCcccccCCccc-CCHHHHHHHHhhhhHHHHHHHHHHHHHhc-cCCEEEEEeccccccCCccch
Confidence            9999999999999997643    23333 57799999999999999999999999996 468999999999888888899


Q ss_pred             cchHHHHHHHHHHHHHHHHhCCC-eEEEEEecCccccCcccc
Q 044010          196 FYNASKAALVLFFETLRVELGSD-VGVTIVTPGFIESELTQG  236 (248)
Q Consensus       196 ~Y~~sKaal~~l~~~la~~~~~~-i~v~~v~pg~v~T~~~~~  236 (248)
                      .|++||+|+++|+++++.|++++ ||||+|+||+++|+|.+.
T Consensus       161 ~Y~asKaal~~l~~~la~el~~~gI~Vn~v~PG~v~T~~~~~  202 (258)
T PRK07533        161 LMGPVKAALESSVRYLAAELGPKGIRVHAISPGPLKTRAASG  202 (258)
T ss_pred             hhHHHHHHHHHHHHHHHHHhhhcCcEEEEEecCCcCChhhhc
Confidence            99999999999999999999874 999999999999998754

>PRK07370 enoyl-(acyl carrier protein) reductase; Validated

Probab=100.00  E-value=4.8e-37  Score=259.58  Aligned_cols=189  Identities=22%  Similarity=0.287  Sum_probs=165.2

Q ss_pred             CCCCCEEEEcCCC--ChHHHHHHHHHHHcCCeEEEEeCCcc--hHHHHHHHHHhhCCCcEEEEEccCCCHHHHHHHHHHH
Q 044010           44 DVSGKVVIITGAS--SGIGEHLAYEYARRGACLALCARREK--SLEEVADTAREIGSPDVITIRADVSKVDDCRSLVEET  119 (248)
Q Consensus        44 ~~~~k~~lVtGg~--~gIG~aia~~l~~~G~~V~l~~r~~~--~~~~~~~~l~~~~~~~v~~~~~D~~~~~~~~~~~~~~  119 (248)
                      +++||+++||||+  +|||+++|++|+++|++|++.+|+.+  +.++..+++.+... ++.++++|++|.++++++++++
T Consensus         3 ~l~~k~~lItGas~~~GIG~aia~~la~~G~~v~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~Dl~d~~~v~~~~~~~   81 (258)
T PRK07370          3 DLTGKKALVTGIANNRSIAWGIAQQLHAAGAELGITYLPDEKGRFEKKVRELTEPLN-PSLFLPCDVQDDAQIEETFETI   81 (258)
T ss_pred             ccCCcEEEEeCCCCCCchHHHHHHHHHHCCCEEEEEecCcccchHHHHHHHHHhccC-cceEeecCcCCHHHHHHHHHHH
Confidence            5789999999986  89999999999999999999877543  34455555654443 5678899999999999999999


Q ss_pred             HhHcCCccEEEEccccCCc----ccccccCChHHHHHHHHhhhHHHHHHHHHHhhhhhhcCCeEEEEcCccccccCCCCc
Q 044010          120 MNHFGRLDHLVNNAGISSV----ALFEDIVNITDFKQIMNINFWGSVYTTRFAVPHLRYTKGKIVVLSSAASWLTAPRMS  195 (248)
Q Consensus       120 ~~~~g~id~vv~~ag~~~~----~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~g~iV~isS~~~~~~~~~~~  195 (248)
                      .+++|++|++|||||....    .++.+ .+.++|++.+++|+.+++.+++.++|.|++ +|+||++||..+..+.+++.
T Consensus        82 ~~~~g~iD~lv~nag~~~~~~~~~~~~~-~~~~~~~~~~~iN~~~~~~l~~~~~~~m~~-~g~Iv~isS~~~~~~~~~~~  159 (258)
T PRK07370         82 KQKWGKLDILVHCLAFAGKEELIGDFSA-TSREGFARALEISAYSLAPLCKAAKPLMSE-GGSIVTLTYLGGVRAIPNYN  159 (258)
T ss_pred             HHHcCCCCEEEEcccccCcccccCcchh-hCHHHHHHHheeeeHHHHHHHHHHHHHHhh-CCeEEEEeccccccCCcccc
Confidence            9999999999999997642    33333 577999999999999999999999999974 68999999999988889999


Q ss_pred             cchHHHHHHHHHHHHHHHHhCCC-eEEEEEecCccccCccc
Q 044010          196 FYNASKAALVLFFETLRVELGSD-VGVTIVTPGFIESELTQ  235 (248)
Q Consensus       196 ~Y~~sKaal~~l~~~la~~~~~~-i~v~~v~pg~v~T~~~~  235 (248)
                      .|++||+|+++++++++.|++++ ||||+|+||+++|++..
T Consensus       160 ~Y~asKaal~~l~~~la~el~~~gI~Vn~i~PG~v~T~~~~  200 (258)
T PRK07370        160 VMGVAKAALEASVRYLAAELGPKNIRVNAISAGPIRTLASS  200 (258)
T ss_pred             hhhHHHHHHHHHHHHHHHHhCcCCeEEEEEecCcccCchhh
Confidence            99999999999999999999875 99999999999999864

>PRK06603 enoyl-(acyl carrier protein) reductase; Provisional

Probab=100.00  E-value=7.5e-37  Score=258.65  Aligned_cols=189  Identities=21%  Similarity=0.280  Sum_probs=163.5

Q ss_pred             cCCCCCEEEEcCCCC--hHHHHHHHHHHHcCCeEEEEeCCcchHHHHHHHHHhhCCCcEEEEEccCCCHHHHHHHHHHHH
Q 044010           43 EDVSGKVVIITGASS--GIGEHLAYEYARRGACLALCARREKSLEEVADTAREIGSPDVITIRADVSKVDDCRSLVEETM  120 (248)
Q Consensus        43 ~~~~~k~~lVtGg~~--gIG~aia~~l~~~G~~V~l~~r~~~~~~~~~~~l~~~~~~~v~~~~~D~~~~~~~~~~~~~~~  120 (248)
                      ..++||+++||||++  |||+++|++|+++|++|++.+|+. +.++..+++.+..+ ....+++|++|.++++++++++.
T Consensus         4 ~~~~~k~~lITGas~~~GIG~a~a~~la~~G~~v~~~~r~~-~~~~~~~~l~~~~g-~~~~~~~Dv~~~~~v~~~~~~~~   81 (260)
T PRK06603          4 GLLQGKKGLITGIANNMSISWAIAQLAKKHGAELWFTYQSE-VLEKRVKPLAEEIG-CNFVSELDVTNPKSISNLFDDIK   81 (260)
T ss_pred             cccCCcEEEEECCCCCcchHHHHHHHHHHcCCEEEEEeCch-HHHHHHHHHHHhcC-CceEEEccCCCHHHHHHHHHHHH
Confidence            357899999999997  999999999999999999999874 34444555554422 23467899999999999999999


Q ss_pred             hHcCCccEEEEccccCCc----ccccccCChHHHHHHHHhhhHHHHHHHHHHhhhhhhcCCeEEEEcCccccccCCCCcc
Q 044010          121 NHFGRLDHLVNNAGISSV----ALFEDIVNITDFKQIMNINFWGSVYTTRFAVPHLRYTKGKIVVLSSAASWLTAPRMSF  196 (248)
Q Consensus       121 ~~~g~id~vv~~ag~~~~----~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~g~iV~isS~~~~~~~~~~~~  196 (248)
                      +++|++|++|||||....    .++.+ .+.++|++.+++|+.+++.+++.+.|.|. ++|+||++||..+..+.+++.+
T Consensus        82 ~~~g~iDilVnnag~~~~~~~~~~~~~-~~~~~~~~~~~vn~~~~~~~~~~~~~~m~-~~G~Iv~isS~~~~~~~~~~~~  159 (260)
T PRK06603         82 EKWGSFDFLLHGMAFADKNELKGRYVD-TSLENFHNSLHISCYSLLELSRSAEALMH-DGGSIVTLTYYGAEKVIPNYNV  159 (260)
T ss_pred             HHcCCccEEEEccccCCcccccCcccc-CCHHHHHHHHHHHHHHHHHHHHHHHhhhc-cCceEEEEecCccccCCCcccc
Confidence            999999999999997542    23333 57899999999999999999999999996 4689999999998888889999


Q ss_pred             chHHHHHHHHHHHHHHHHhCCC-eEEEEEecCccccCccc
Q 044010          197 YNASKAALVLFFETLRVELGSD-VGVTIVTPGFIESELTQ  235 (248)
Q Consensus       197 Y~~sKaal~~l~~~la~~~~~~-i~v~~v~pg~v~T~~~~  235 (248)
                      |++||+|+++|+++++.|++++ ||||+|+||+++|+|..
T Consensus       160 Y~asKaal~~l~~~la~el~~~gIrVn~v~PG~v~T~~~~  199 (260)
T PRK06603        160 MGVAKAALEASVKYLANDMGENNIRVNAISAGPIKTLASS  199 (260)
T ss_pred             hhhHHHHHHHHHHHHHHHhhhcCeEEEEEecCcCcchhhh
Confidence            9999999999999999999875 99999999999999864

>PRK07062 short chain dehydrogenase; Provisional

Probab=100.00  E-value=1.2e-36  Score=257.57  Aligned_cols=194  Identities=28%  Similarity=0.435  Sum_probs=175.5

Q ss_pred             ccCCCCCEEEEcCCCChHHHHHHHHHHHcCCeEEEEeCCcchHHHHHHHHHhhCC-CcEEEEEccCCCHHHHHHHHHHHH
Q 044010           42 SEDVSGKVVIITGASSGIGEHLAYEYARRGACLALCARREKSLEEVADTAREIGS-PDVITIRADVSKVDDCRSLVEETM  120 (248)
Q Consensus        42 ~~~~~~k~~lVtGg~~gIG~aia~~l~~~G~~V~l~~r~~~~~~~~~~~l~~~~~-~~v~~~~~D~~~~~~~~~~~~~~~  120 (248)
                      ..+++||+++||||++|||++++++|+++|++|++++|+.++.++..+++.+..+ .++..+.+|++|.++++++++++.
T Consensus         3 ~~~l~~k~~lItGas~giG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~v~~~~~~~~   82 (265)
T PRK07062          3 QIQLEGRVAVVTGGSSGIGLATVELLLEAGASVAICGRDEERLASAEARLREKFPGARLLAARCDVLDEADVAAFAAAVE   82 (265)
T ss_pred             ccccCCCEEEEeCCCchHHHHHHHHHHHCCCeEEEEeCCHHHHHHHHHHHHhhCCCceEEEEEecCCCHHHHHHHHHHHH
Confidence            3478999999999999999999999999999999999999888888877776543 368889999999999999999999


Q ss_pred             hHcCCccEEEEccccCCcccccccCChHHHHHHHHhhhHHHHHHHHHHhhhhhhc-CCeEEEEcCccccccCCCCccchH
Q 044010          121 NHFGRLDHLVNNAGISSVALFEDIVNITDFKQIMNINFWGSVYTTRFAVPHLRYT-KGKIVVLSSAASWLTAPRMSFYNA  199 (248)
Q Consensus       121 ~~~g~id~vv~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~-~g~iV~isS~~~~~~~~~~~~Y~~  199 (248)
                      +++|++|++|||||.....++.+ .+.++|++.+++|+.+++.+++.++|.|++. +|+||++||..+..+.+....|++
T Consensus        83 ~~~g~id~li~~Ag~~~~~~~~~-~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~g~iv~isS~~~~~~~~~~~~y~a  161 (265)
T PRK07062         83 ARFGGVDMLVNNAGQGRVSTFAD-TTDDAWRDELELKYFSVINPTRAFLPLLRASAAASIVCVNSLLALQPEPHMVATSA  161 (265)
T ss_pred             HhcCCCCEEEECCCCCCCCChhh-CCHHHHHHHHHHHhHHHHHHHHHHHHHHhccCCcEEEEeccccccCCCCCchHhHH
Confidence            99999999999999876555555 5778999999999999999999999999755 489999999999988888999999


Q ss_pred             HHHHHHHHHHHHHHHhCC-CeEEEEEecCccccCcccc
Q 044010          200 SKAALVLFFETLRVELGS-DVGVTIVTPGFIESELTQG  236 (248)
Q Consensus       200 sKaal~~l~~~la~~~~~-~i~v~~v~pg~v~T~~~~~  236 (248)
                      +|+|+++++++++.|+.+ +||||+|+||+++|++...
T Consensus       162 sKaal~~~~~~la~e~~~~gi~v~~i~PG~v~t~~~~~  199 (265)
T PRK07062        162 ARAGLLNLVKSLATELAPKGVRVNSILLGLVESGQWRR  199 (265)
T ss_pred             HHHHHHHHHHHHHHHhhhcCeEEEEEecCccccchhhh
Confidence            999999999999999987 4999999999999998654

>PRK07984 enoyl-(acyl carrier protein) reductase; Provisional

Probab=100.00  E-value=9.9e-37  Score=258.27  Aligned_cols=188  Identities=20%  Similarity=0.265  Sum_probs=163.3

Q ss_pred             CCCCEEEEcCCCC--hHHHHHHHHHHHcCCeEEEEeCCcchHHHHHHHHHhhCCCcEEEEEccCCCHHHHHHHHHHHHhH
Q 044010           45 VSGKVVIITGASS--GIGEHLAYEYARRGACLALCARREKSLEEVADTAREIGSPDVITIRADVSKVDDCRSLVEETMNH  122 (248)
Q Consensus        45 ~~~k~~lVtGg~~--gIG~aia~~l~~~G~~V~l~~r~~~~~~~~~~~l~~~~~~~v~~~~~D~~~~~~~~~~~~~~~~~  122 (248)
                      ++||+++||||++  |||+++|++|+++|++|++.+|+ ++.++..+++....+ .+..+.||++|.++++++++++.++
T Consensus         4 l~~k~~lITGas~~~GIG~aia~~la~~G~~vil~~r~-~~~~~~~~~~~~~~~-~~~~~~~Dl~~~~~v~~~~~~~~~~   81 (262)
T PRK07984          4 LSGKRILVTGVASKLSIAYGIAQAMHREGAELAFTYQN-DKLKGRVEEFAAQLG-SDIVLPCDVAEDASIDAMFAELGKV   81 (262)
T ss_pred             cCCCEEEEeCCCCCccHHHHHHHHHHHCCCEEEEEecc-hhHHHHHHHHHhccC-CceEeecCCCCHHHHHHHHHHHHhh
Confidence            7899999999985  99999999999999999999987 445555666655443 4678899999999999999999999


Q ss_pred             cCCccEEEEccccCCccc----ccccCChHHHHHHHHhhhHHHHHHHHHHhhhhhhcCCeEEEEcCccccccCCCCccch
Q 044010          123 FGRLDHLVNNAGISSVAL----FEDIVNITDFKQIMNINFWGSVYTTRFAVPHLRYTKGKIVVLSSAASWLTAPRMSFYN  198 (248)
Q Consensus       123 ~g~id~vv~~ag~~~~~~----~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~g~iV~isS~~~~~~~~~~~~Y~  198 (248)
                      +|++|++|||||......    .....+.++|++.+++|+.+++.+.+.+.|.++ ++|+||++||..+..+.+.+.+|+
T Consensus        82 ~g~iD~linnAg~~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~-~~g~Iv~iss~~~~~~~~~~~~Y~  160 (262)
T PRK07984         82 WPKFDGFVHSIGFAPGDQLDGDYVNAVTREGFKIAHDISSYSFVAMAKACRSMLN-PGSALLTLSYLGAERAIPNYNVMG  160 (262)
T ss_pred             cCCCCEEEECCccCCccccCCcchhhcCHHHHHHHhhhhhHHHHHHHHHHHHHhc-CCcEEEEEecCCCCCCCCCcchhH
Confidence            999999999999764322    122246789999999999999999999998765 568999999999888888999999


Q ss_pred             HHHHHHHHHHHHHHHHhCCC-eEEEEEecCccccCccc
Q 044010          199 ASKAALVLFFETLRVELGSD-VGVTIVTPGFIESELTQ  235 (248)
Q Consensus       199 ~sKaal~~l~~~la~~~~~~-i~v~~v~pg~v~T~~~~  235 (248)
                      +||+|+++|+++++.|+++. ||||+|+||+++|++..
T Consensus       161 asKaal~~l~~~la~el~~~gIrVn~i~PG~v~T~~~~  198 (262)
T PRK07984        161 LAKASLEANVRYMANAMGPEGVRVNAISAGPIRTLAAS  198 (262)
T ss_pred             HHHHHHHHHHHHHHHHhcccCcEEeeeecCcccchHHh
Confidence            99999999999999999884 99999999999998754

>PRK08862 short chain dehydrogenase; Provisional

Probab=100.00  E-value=1.7e-36  Score=251.72  Aligned_cols=187  Identities=22%  Similarity=0.280  Sum_probs=165.3

Q ss_pred             cCCCCCEEEEcCCCChHHHHHHHHHHHcCCeEEEEeCCcchHHHHHHHHHhhCCCcEEEEEccCCCHHHHHHHHHHHHhH
Q 044010           43 EDVSGKVVIITGASSGIGEHLAYEYARRGACLALCARREKSLEEVADTAREIGSPDVITIRADVSKVDDCRSLVEETMNH  122 (248)
Q Consensus        43 ~~~~~k~~lVtGg~~gIG~aia~~l~~~G~~V~l~~r~~~~~~~~~~~l~~~~~~~v~~~~~D~~~~~~~~~~~~~~~~~  122 (248)
                      ++++||+++||||++|||++++++|+++|++|++++|+.+++++..+++++.+. ++..+.+|+++.++++++++++.++
T Consensus         1 ~~~~~k~~lVtGas~GIG~aia~~la~~G~~V~~~~r~~~~l~~~~~~i~~~~~-~~~~~~~D~~~~~~~~~~~~~~~~~   79 (227)
T PRK08862          1 MDIKSSIILITSAGSVLGRTISCHFARLGATLILCDQDQSALKDTYEQCSALTD-NVYSFQLKDFSQESIRHLFDAIEQQ   79 (227)
T ss_pred             CCCCCeEEEEECCccHHHHHHHHHHHHCCCEEEEEcCCHHHHHHHHHHHHhcCC-CeEEEEccCCCHHHHHHHHHHHHHH
Confidence            468899999999999999999999999999999999999988888887776553 6788999999999999999999999


Q ss_pred             cC-CccEEEEccccCCcccccccCChHHHHHHHHhhhHHHHHHHHHHhhhhhhc--CCeEEEEcCccccccCCCCccchH
Q 044010          123 FG-RLDHLVNNAGISSVALFEDIVNITDFKQIMNINFWGSVYTTRFAVPHLRYT--KGKIVVLSSAASWLTAPRMSFYNA  199 (248)
Q Consensus       123 ~g-~id~vv~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~--~g~iV~isS~~~~~~~~~~~~Y~~  199 (248)
                      +| ++|++|||||.........+.+.++|.+.+++|+.+++.+++.+.|+|.++  +|+||++||..+.   ++...|++
T Consensus        80 ~g~~iD~li~nag~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~m~~~~~~g~Iv~isS~~~~---~~~~~Y~a  156 (227)
T PRK08862         80 FNRAPDVLVNNWTSSPLPSLFDEQPSESFIQQLSSLASTLFTYGQVAAERMRKRNKKGVIVNVISHDDH---QDLTGVES  156 (227)
T ss_pred             hCCCCCEEEECCccCCCCCccccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcCCCceEEEEecCCCC---CCcchhHH
Confidence            99 999999999865443333345778999999999999999999999999754  4899999996543   45778999


Q ss_pred             HHHHHHHHHHHHHHHhCC-CeEEEEEecCccccCc
Q 044010          200 SKAALVLFFETLRVELGS-DVGVTIVTPGFIESEL  233 (248)
Q Consensus       200 sKaal~~l~~~la~~~~~-~i~v~~v~pg~v~T~~  233 (248)
                      ||+|+++|+++++.|+++ +||||+|+||+++|+.
T Consensus       157 sKaal~~~~~~la~el~~~~Irvn~v~PG~i~t~~  191 (227)
T PRK08862        157 SNALVSGFTHSWAKELTPFNIRVGGVVPSIFSANG  191 (227)
T ss_pred             HHHHHHHHHHHHHHHHhhcCcEEEEEecCcCcCCC
Confidence            999999999999999987 4999999999999984

>PRK06997 enoyl-(acyl carrier protein) reductase; Provisional

Probab=100.00  E-value=1.3e-36  Score=257.30  Aligned_cols=190  Identities=22%  Similarity=0.275  Sum_probs=160.5

Q ss_pred             CCCCCEEEEcCC--CChHHHHHHHHHHHcCCeEEEEeCCcchHHHHHHHHHhhCCCcEEEEEccCCCHHHHHHHHHHHHh
Q 044010           44 DVSGKVVIITGA--SSGIGEHLAYEYARRGACLALCARREKSLEEVADTAREIGSPDVITIRADVSKVDDCRSLVEETMN  121 (248)
Q Consensus        44 ~~~~k~~lVtGg--~~gIG~aia~~l~~~G~~V~l~~r~~~~~~~~~~~l~~~~~~~v~~~~~D~~~~~~~~~~~~~~~~  121 (248)
                      .+++|+++||||  ++|||+++|++|+++|++|++++|... .++..+++.+..+ ....+.+|++|+++++++++++.+
T Consensus         3 ~l~~k~vlItGas~~~GIG~a~a~~l~~~G~~v~~~~~~~~-~~~~~~~~~~~~~-~~~~~~~Dv~d~~~v~~~~~~~~~   80 (260)
T PRK06997          3 FLAGKRILITGLLSNRSIAYGIAKACKREGAELAFTYVGDR-FKDRITEFAAEFG-SDLVFPCDVASDEQIDALFASLGQ   80 (260)
T ss_pred             ccCCcEEEEeCCCCCCcHHHHHHHHHHHCCCeEEEEccchH-HHHHHHHHHHhcC-CcceeeccCCCHHHHHHHHHHHHH
Confidence            578999999996  689999999999999999999876522 2233333433322 234689999999999999999999


Q ss_pred             HcCCccEEEEccccCCcc----cccccCChHHHHHHHHhhhHHHHHHHHHHhhhhhhcCCeEEEEcCccccccCCCCccc
Q 044010          122 HFGRLDHLVNNAGISSVA----LFEDIVNITDFKQIMNINFWGSVYTTRFAVPHLRYTKGKIVVLSSAASWLTAPRMSFY  197 (248)
Q Consensus       122 ~~g~id~vv~~ag~~~~~----~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~g~iV~isS~~~~~~~~~~~~Y  197 (248)
                      ++|++|++|||||.....    ++.+..+.++|++.+++|+.+++.++++++|.|+ ++|+||++||..+..+.+++.+|
T Consensus        81 ~~g~iD~lvnnAG~~~~~~~~~~~~~~~~~~~~~~~~~iN~~~~~~l~~~~lp~m~-~~g~Ii~iss~~~~~~~~~~~~Y  159 (260)
T PRK06997         81 HWDGLDGLVHSIGFAPREAIAGDFLDGLSRENFRIAHDISAYSFPALAKAALPMLS-DDASLLTLSYLGAERVVPNYNTM  159 (260)
T ss_pred             HhCCCcEEEEccccCCccccccccchhcCHHHHHHHHHhhhHHHHHHHHHHHHhcC-CCceEEEEeccccccCCCCcchH
Confidence            999999999999986432    2222356789999999999999999999999995 56899999999998888889999


Q ss_pred             hHHHHHHHHHHHHHHHHhCCC-eEEEEEecCccccCcccc
Q 044010          198 NASKAALVLFFETLRVELGSD-VGVTIVTPGFIESELTQG  236 (248)
Q Consensus       198 ~~sKaal~~l~~~la~~~~~~-i~v~~v~pg~v~T~~~~~  236 (248)
                      ++||+|+++|+++++.|++++ ||||+|+||+++|++...
T Consensus       160 ~asKaal~~l~~~la~el~~~gIrVn~i~PG~v~T~~~~~  199 (260)
T PRK06997        160 GLAKASLEASVRYLAVSLGPKGIRANGISAGPIKTLAASG  199 (260)
T ss_pred             HHHHHHHHHHHHHHHHHhcccCeEEEEEeeCccccchhcc
Confidence            999999999999999999885 999999999999998653

>KOG0725 consensus Reductases with broad range of substrate specificities [General function prediction only]

Probab=100.00  E-value=1.7e-36  Score=256.80  Aligned_cols=192  Identities=36%  Similarity=0.487  Sum_probs=168.6

Q ss_pred             ccCCCCCEEEEcCCCChHHHHHHHHHHHcCCeEEEEeCCcchHHHHHHHHHhhCC--CcEEEEEccCCCHHHHHHHHHHH
Q 044010           42 SEDVSGKVVIITGASSGIGEHLAYEYARRGACLALCARREKSLEEVADTAREIGS--PDVITIRADVSKVDDCRSLVEET  119 (248)
Q Consensus        42 ~~~~~~k~~lVtGg~~gIG~aia~~l~~~G~~V~l~~r~~~~~~~~~~~l~~~~~--~~v~~~~~D~~~~~~~~~~~~~~  119 (248)
                      +..++||+++|||+++|||+++|++|++.|++|++++|+.++.++..+++...+.  .++..+.||+++++++++++++.
T Consensus         3 ~~~l~gkvalVTG~s~GIG~aia~~la~~Ga~v~i~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~~~~l~~~~   82 (270)
T KOG0725|consen    3 GGRLAGKVALVTGGSSGIGKAIALLLAKAGAKVVITGRSEERLEETAQELGGLGYTGGKVLAIVCDVSKEVDVEKLVEFA   82 (270)
T ss_pred             CccCCCcEEEEECCCChHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcCCCCCeeEEEECcCCCHHHHHHHHHHH
Confidence            3578999999999999999999999999999999999999998888887765443  36889999999999999999999


Q ss_pred             HhH-cCCccEEEEccccCCcccccccCChHHHHHHHHhhhHH-HHHHHHHHhhhhhh-cCCeEEEEcCccccccCCCC-c
Q 044010          120 MNH-FGRLDHLVNNAGISSVALFEDIVNITDFKQIMNINFWG-SVYTTRFAVPHLRY-TKGKIVVLSSAASWLTAPRM-S  195 (248)
Q Consensus       120 ~~~-~g~id~vv~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~-~~~l~~~~~~~~~~-~~g~iV~isS~~~~~~~~~~-~  195 (248)
                      .++ +|++|++|||||.........+.+.++|++++++|+.| .+.+.+.+.+.+++ ++|+|+++||..+..+.+.. .
T Consensus        83 ~~~~~GkidiLvnnag~~~~~~~~~~~s~e~~d~~~~~Nl~G~~~~~~~~a~~~~~~~~gg~I~~~ss~~~~~~~~~~~~  162 (270)
T KOG0725|consen   83 VEKFFGKIDILVNNAGALGLTGSILDLSEEVFDKIMATNLRGSAFCLKQAARPMLKKSKGGSIVNISSVAGVGPGPGSGV  162 (270)
T ss_pred             HHHhCCCCCEEEEcCCcCCCCCChhhCCHHHHHHHHhhhchhHHHHHHHHHHHHHHhcCCceEEEEeccccccCCCCCcc
Confidence            999 79999999999988766433346899999999999995 55566666666665 35899999999988776655 7


Q ss_pred             cchHHHHHHHHHHHHHHHHhCCC-eEEEEEecCccccCc
Q 044010          196 FYNASKAALVLFFETLRVELGSD-VGVTIVTPGFIESEL  233 (248)
Q Consensus       196 ~Y~~sKaal~~l~~~la~~~~~~-i~v~~v~pg~v~T~~  233 (248)
                      +|+++|+|+++|+|++|.|+++. ||||+|+||++.|++
T Consensus       163 ~Y~~sK~al~~ltr~lA~El~~~gIRvN~v~PG~i~T~~  201 (270)
T KOG0725|consen  163 AYGVSKAALLQLTRSLAKELAKHGIRVNSVSPGLVKTSL  201 (270)
T ss_pred             cchhHHHHHHHHHHHHHHHHhhcCcEEEEeecCcEeCCc
Confidence            99999999999999999999885 999999999999998

>PRK05867 short chain dehydrogenase; Provisional

Probab=100.00  E-value=1.5e-36  Score=255.40  Aligned_cols=191  Identities=34%  Similarity=0.534  Sum_probs=170.0

Q ss_pred             CCCCCEEEEcCCCChHHHHHHHHHHHcCCeEEEEeCCcchHHHHHHHHHhhCCCcEEEEEccCCCHHHHHHHHHHHHhHc
Q 044010           44 DVSGKVVIITGASSGIGEHLAYEYARRGACLALCARREKSLEEVADTAREIGSPDVITIRADVSKVDDCRSLVEETMNHF  123 (248)
Q Consensus        44 ~~~~k~~lVtGg~~gIG~aia~~l~~~G~~V~l~~r~~~~~~~~~~~l~~~~~~~v~~~~~D~~~~~~~~~~~~~~~~~~  123 (248)
                      +++||++|||||++|||.+++++|+++|++|++++|+.++.++..++++..+. ++..+.+|++|.++++++++++.+++
T Consensus         6 ~~~~k~vlVtGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~l~~~~~-~~~~~~~D~~~~~~~~~~~~~~~~~~   84 (253)
T PRK05867          6 DLHGKRALITGASTGIGKRVALAYVEAGAQVAIAARHLDALEKLADEIGTSGG-KVVPVCCDVSQHQQVTSMLDQVTAEL   84 (253)
T ss_pred             cCCCCEEEEECCCchHHHHHHHHHHHCCCEEEEEcCCHHHHHHHHHHHHhcCC-eEEEEEccCCCHHHHHHHHHHHHHHh
Confidence            58899999999999999999999999999999999999888888887776553 78889999999999999999999999


Q ss_pred             CCccEEEEccccCCcccccccCChHHHHHHHHhhhHHHHHHHHHHhhhhhhc--CCeEEEEcCccccccC-C-CCccchH
Q 044010          124 GRLDHLVNNAGISSVALFEDIVNITDFKQIMNINFWGSVYTTRFAVPHLRYT--KGKIVVLSSAASWLTA-P-RMSFYNA  199 (248)
Q Consensus       124 g~id~vv~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~--~g~iV~isS~~~~~~~-~-~~~~Y~~  199 (248)
                      |++|++|||||.....+..+ .+.++|++.+++|+.+++.+++.+.|.|.++  +|+||++||..+..+. + ...+|++
T Consensus        85 g~id~lv~~ag~~~~~~~~~-~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~g~iv~~sS~~~~~~~~~~~~~~Y~a  163 (253)
T PRK05867         85 GGIDIAVCNAGIITVTPMLD-MPLEEFQRLQNTNVTGVFLTAQAAAKAMVKQGQGGVIINTASMSGHIINVPQQVSHYCA  163 (253)
T ss_pred             CCCCEEEECCCCCCCCChhh-CCHHHHHHHHHhcchhHHHHHHHHHHHHHhcCCCcEEEEECcHHhcCCCCCCCccchHH
Confidence            99999999999876665555 5779999999999999999999999998654  3789999998776432 3 4578999


Q ss_pred             HHHHHHHHHHHHHHHhCC-CeEEEEEecCccccCcccc
Q 044010          200 SKAALVLFFETLRVELGS-DVGVTIVTPGFIESELTQG  236 (248)
Q Consensus       200 sKaal~~l~~~la~~~~~-~i~v~~v~pg~v~T~~~~~  236 (248)
                      ||+|++++++++++|+++ +||||+|+||+++|++...
T Consensus       164 sKaal~~~~~~la~e~~~~gI~vn~i~PG~v~t~~~~~  201 (253)
T PRK05867        164 SKAAVIHLTKAMAVELAPHKIRVNSVSPGYILTELVEP  201 (253)
T ss_pred             HHHHHHHHHHHHHHHHhHhCeEEEEeecCCCCCccccc
Confidence            999999999999999987 4999999999999999764

>PRK07791 short chain dehydrogenase; Provisional

Probab=100.00  E-value=1.9e-36  Score=259.58  Aligned_cols=190  Identities=27%  Similarity=0.417  Sum_probs=169.6

Q ss_pred             CCCCCEEEEcCCCChHHHHHHHHHHHcCCeEEEEeCCc---------chHHHHHHHHHhhCCCcEEEEEccCCCHHHHHH
Q 044010           44 DVSGKVVIITGASSGIGEHLAYEYARRGACLALCARRE---------KSLEEVADTAREIGSPDVITIRADVSKVDDCRS  114 (248)
Q Consensus        44 ~~~~k~~lVtGg~~gIG~aia~~l~~~G~~V~l~~r~~---------~~~~~~~~~l~~~~~~~v~~~~~D~~~~~~~~~  114 (248)
                      .+++|+++||||++|||+++|++|+++|++|++++|+.         ++.++..++++..+. ++.++.+|++|++++++
T Consensus         3 ~l~~k~~lITGas~GIG~aia~~la~~G~~vii~~~~~~~~~~~~~~~~~~~~~~~l~~~~~-~~~~~~~Dv~~~~~v~~   81 (286)
T PRK07791          3 LLDGRVVIVTGAGGGIGRAHALAFAAEGARVVVNDIGVGLDGSASGGSAAQAVVDEIVAAGG-EAVANGDDIADWDGAAN   81 (286)
T ss_pred             ccCCCEEEEECCCchHHHHHHHHHHHCCCEEEEeeCCccccccccchhHHHHHHHHHHhcCC-ceEEEeCCCCCHHHHHH
Confidence            47899999999999999999999999999999998876         666677777765543 68889999999999999


Q ss_pred             HHHHHHhHcCCccEEEEccccCCcccccccCChHHHHHHHHhhhHHHHHHHHHHhhhhhhc-------CCeEEEEcCccc
Q 044010          115 LVEETMNHFGRLDHLVNNAGISSVALFEDIVNITDFKQIMNINFWGSVYTTRFAVPHLRYT-------KGKIVVLSSAAS  187 (248)
Q Consensus       115 ~~~~~~~~~g~id~vv~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~-------~g~iV~isS~~~  187 (248)
                      +++++.+++|++|++|||||+....++.+ .+.++|++.+++|+.+++.+++++.|.|.+.       .|+||++||..+
T Consensus        82 ~~~~~~~~~g~id~lv~nAG~~~~~~~~~-~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~~~~~~~~~g~Iv~isS~~~  160 (286)
T PRK07791         82 LVDAAVETFGGLDVLVNNAGILRDRMIAN-MSEEEWDAVIAVHLKGHFATLRHAAAYWRAESKAGRAVDARIINTSSGAG  160 (286)
T ss_pred             HHHHHHHhcCCCCEEEECCCCCCCCCccc-CCHHHHHHHHHHccHHHHHHHHHHHHHHHHhcccCCCCCcEEEEeCchhh
Confidence            99999999999999999999876655554 5789999999999999999999999998643       279999999999


Q ss_pred             cccCCCCccchHHHHHHHHHHHHHHHHhCC-CeEEEEEecCccccCcccc
Q 044010          188 WLTAPRMSFYNASKAALVLFFETLRVELGS-DVGVTIVTPGFIESELTQG  236 (248)
Q Consensus       188 ~~~~~~~~~Y~~sKaal~~l~~~la~~~~~-~i~v~~v~pg~v~T~~~~~  236 (248)
                      ..+.++...|++||+|+++|+++++.|+++ +||||+|+|| ++|+|...
T Consensus       161 ~~~~~~~~~Y~asKaal~~l~~~la~el~~~gIrVn~v~Pg-~~T~~~~~  209 (286)
T PRK07791        161 LQGSVGQGNYSAAKAGIAALTLVAAAELGRYGVTVNAIAPA-ARTRMTET  209 (286)
T ss_pred             CcCCCCchhhHHHHHHHHHHHHHHHHHHHHhCeEEEEECCC-CCCCcchh
Confidence            999999999999999999999999999987 4999999999 89998654

>PRK08416 7-alpha-hydroxysteroid dehydrogenase; Provisional

Probab=100.00  E-value=2.5e-36  Score=255.23  Aligned_cols=194  Identities=22%  Similarity=0.338  Sum_probs=169.7

Q ss_pred             ccCCCCCEEEEcCCCChHHHHHHHHHHHcCCeEEEEeC-CcchHHHHHHHHHhhCCCcEEEEEccCCCHHHHHHHHHHHH
Q 044010           42 SEDVSGKVVIITGASSGIGEHLAYEYARRGACLALCAR-REKSLEEVADTAREIGSPDVITIRADVSKVDDCRSLVEETM  120 (248)
Q Consensus        42 ~~~~~~k~~lVtGg~~gIG~aia~~l~~~G~~V~l~~r-~~~~~~~~~~~l~~~~~~~v~~~~~D~~~~~~~~~~~~~~~  120 (248)
                      ..++++|+++||||++|||+++|++|+++|++|++++| +.+..+...++++...+.++.++.+|++|.++++++++++.
T Consensus         3 ~~~l~~k~vlItGas~gIG~~ia~~l~~~G~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~   82 (260)
T PRK08416          3 SNEMKGKTLVISGGTRGIGKAIVYEFAQSGVNIAFTYNSNVEEANKIAEDLEQKYGIKAKAYPLNILEPETYKELFKKID   82 (260)
T ss_pred             ccccCCCEEEEeCCCchHHHHHHHHHHHCCCEEEEEcCCCHHHHHHHHHHHHHhcCCceEEEEcCCCCHHHHHHHHHHHH
Confidence            45789999999999999999999999999999998865 55566666666665544578899999999999999999999


Q ss_pred             hHcCCccEEEEccccCCc------ccccccCChHHHHHHHHhhhHHHHHHHHHHhhhhhhc-CCeEEEEcCccccccCCC
Q 044010          121 NHFGRLDHLVNNAGISSV------ALFEDIVNITDFKQIMNINFWGSVYTTRFAVPHLRYT-KGKIVVLSSAASWLTAPR  193 (248)
Q Consensus       121 ~~~g~id~vv~~ag~~~~------~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~-~g~iV~isS~~~~~~~~~  193 (248)
                      +++|++|++|||||....      .++.+ .+.+++++.+++|+.+++.+++.+.|.|.+. .|+||++||..+..+.++
T Consensus        83 ~~~g~id~lv~nAg~~~~~~~~~~~~~~~-~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~g~iv~isS~~~~~~~~~  161 (260)
T PRK08416         83 EDFDRVDFFISNAIISGRAVVGGYTKFMR-LKPKGLNNIYTATVNAFVVGAQEAAKRMEKVGGGSIISLSSTGNLVYIEN  161 (260)
T ss_pred             HhcCCccEEEECccccccccccccCChhh-CCHHHHHHHHhhhhHHHHHHHHHHHHhhhccCCEEEEEEeccccccCCCC
Confidence            999999999999986531      23333 4678999999999999999999999998754 489999999988888889


Q ss_pred             CccchHHHHHHHHHHHHHHHHhCC-CeEEEEEecCccccCcccc
Q 044010          194 MSFYNASKAALVLFFETLRVELGS-DVGVTIVTPGFIESELTQG  236 (248)
Q Consensus       194 ~~~Y~~sKaal~~l~~~la~~~~~-~i~v~~v~pg~v~T~~~~~  236 (248)
                      +..|++||+|+++++++++.|+++ +||||+|+||+++|+|.+.
T Consensus       162 ~~~Y~asK~a~~~~~~~la~el~~~gi~v~~v~PG~i~T~~~~~  205 (260)
T PRK08416        162 YAGHGTSKAAVETMVKYAATELGEKNIRVNAVSGGPIDTDALKA  205 (260)
T ss_pred             cccchhhHHHHHHHHHHHHHHhhhhCeEEEEEeeCcccChhhhh
Confidence            999999999999999999999987 4999999999999998654

>PLN02730 enoyl-[acyl-carrier-protein] reductase

Probab=100.00  E-value=1.8e-36  Score=260.72  Aligned_cols=192  Identities=19%  Similarity=0.196  Sum_probs=163.7

Q ss_pred             ccCCCCCEEEEcCC--CChHHHHHHHHHHHcCCeEEEEeCCcchHHHHHHHHHhh--------C-C---CcEEEEEccC-
Q 044010           42 SEDVSGKVVIITGA--SSGIGEHLAYEYARRGACLALCARREKSLEEVADTAREI--------G-S---PDVITIRADV-  106 (248)
Q Consensus        42 ~~~~~~k~~lVtGg--~~gIG~aia~~l~~~G~~V~l~~r~~~~~~~~~~~l~~~--------~-~---~~v~~~~~D~-  106 (248)
                      +++++||++||||+  ++|||+++|+.|+++|++|++ +|+.++++.....+++.        . +   .....+.+|+ 
T Consensus         4 ~~~l~gk~alITGa~~s~GIG~a~A~~la~~Ga~Vv~-~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~   82 (303)
T PLN02730          4 PIDLRGKRAFIAGVADDNGYGWAIAKALAAAGAEILV-GTWVPALNIFETSLRRGKFDESRKLPDGSLMEITKVYPLDAV   82 (303)
T ss_pred             CcCCCCCEEEEeCCCCCCcHHHHHHHHHHHCCCEEEE-EeCcchhhHHHHhhhccccchhhhcccccccCcCeeeeccee
Confidence            45799999999999  799999999999999999999 78888887777666431        1 1   1145788998 


Q ss_pred             -CC------------------HHHHHHHHHHHHhHcCCccEEEEccccCC--cccccccCChHHHHHHHHhhhHHHHHHH
Q 044010          107 -SK------------------VDDCRSLVEETMNHFGRLDHLVNNAGISS--VALFEDIVNITDFKQIMNINFWGSVYTT  165 (248)
Q Consensus       107 -~~------------------~~~~~~~~~~~~~~~g~id~vv~~ag~~~--~~~~~~~~~~~~~~~~~~~n~~~~~~l~  165 (248)
                       ++                  .++++++++++.+++|++|++|||||...  ..++.+ .+.++|++++++|+.+++.++
T Consensus        83 ~~~~~~~~~~~~~~~~~~~~~~~~v~~l~~~i~~~~G~iDiLVnNAG~~~~~~~~~~~-~~~e~~~~~~~vN~~~~~~l~  161 (303)
T PLN02730         83 FDTPEDVPEDVKTNKRYAGSSNWTVQEVAESVKADFGSIDILVHSLANGPEVTKPLLE-TSRKGYLAAISASSYSFVSLL  161 (303)
T ss_pred             cCccccCchhhhcccccccCCHHHHHHHHHHHHHHcCCCCEEEECCCccccCCCChhh-CCHHHHHHHHHHHhHHHHHHH
Confidence             33                  44899999999999999999999998643  244444 578999999999999999999


Q ss_pred             HHHhhhhhhcCCeEEEEcCccccccCCCC-ccchHHHHHHHHHHHHHHHHhCC--CeEEEEEecCccccCcccc
Q 044010          166 RFAVPHLRYTKGKIVVLSSAASWLTAPRM-SFYNASKAALVLFFETLRVELGS--DVGVTIVTPGFIESELTQG  236 (248)
Q Consensus       166 ~~~~~~~~~~~g~iV~isS~~~~~~~~~~-~~Y~~sKaal~~l~~~la~~~~~--~i~v~~v~pg~v~T~~~~~  236 (248)
                      |+++|.|.+ +|+||++||..+..+.+++ .+|++||+|+++|+++|+.|+++  +||||+|+||+++|+|...
T Consensus       162 ~~~~p~m~~-~G~II~isS~a~~~~~p~~~~~Y~asKaAl~~l~~~la~El~~~~gIrVn~V~PG~v~T~~~~~  234 (303)
T PLN02730        162 QHFGPIMNP-GGASISLTYIASERIIPGYGGGMSSAKAALESDTRVLAFEAGRKYKIRVNTISAGPLGSRAAKA  234 (303)
T ss_pred             HHHHHHHhc-CCEEEEEechhhcCCCCCCchhhHHHHHHHHHHHHHHHHHhCcCCCeEEEEEeeCCccCchhhc
Confidence            999999975 4999999999988887766 48999999999999999999974  5999999999999999764

>PRK08303 short chain dehydrogenase; Provisional

Probab=100.00  E-value=3.2e-36  Score=260.33  Aligned_cols=191  Identities=25%  Similarity=0.370  Sum_probs=162.7

Q ss_pred             cCCCCCEEEEcCCCChHHHHHHHHHHHcCCeEEEEeCCc----------chHHHHHHHHHhhCCCcEEEEEccCCCHHHH
Q 044010           43 EDVSGKVVIITGASSGIGEHLAYEYARRGACLALCARRE----------KSLEEVADTAREIGSPDVITIRADVSKVDDC  112 (248)
Q Consensus        43 ~~~~~k~~lVtGg~~gIG~aia~~l~~~G~~V~l~~r~~----------~~~~~~~~~l~~~~~~~v~~~~~D~~~~~~~  112 (248)
                      .+++||+++||||++|||+++|++|+++|++|++++|+.          ++.++..+++++.+. ++.++++|++|.+++
T Consensus         4 ~~l~~k~~lITGgs~GIG~aia~~la~~G~~Vv~~~r~~~~~~~~~~~~~~~~~~~~~l~~~~~-~~~~~~~Dv~~~~~v   82 (305)
T PRK08303          4 KPLRGKVALVAGATRGAGRGIAVELGAAGATVYVTGRSTRARRSEYDRPETIEETAELVTAAGG-RGIAVQVDHLVPEQV   82 (305)
T ss_pred             cCCCCCEEEEeCCCchHHHHHHHHHHHCCCEEEEEecccccccccccccchHHHHHHHHHhcCC-ceEEEEcCCCCHHHH
Confidence            468999999999999999999999999999999999974          345556666655443 678899999999999


Q ss_pred             HHHHHHHHhHcCCccEEEEcc-ccCC----cccccccCChHHHHHHHHhhhHHHHHHHHHHhhhhhhc-CCeEEEEcCcc
Q 044010          113 RSLVEETMNHFGRLDHLVNNA-GISS----VALFEDIVNITDFKQIMNINFWGSVYTTRFAVPHLRYT-KGKIVVLSSAA  186 (248)
Q Consensus       113 ~~~~~~~~~~~g~id~vv~~a-g~~~----~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~-~g~iV~isS~~  186 (248)
                      +++++++.+++|++|++|||| |...    ..+..+ .+.++|++.+++|+.+++.++++++|.|.++ +|+||++||..
T Consensus        83 ~~~~~~~~~~~g~iDilVnnA~g~~~~~~~~~~~~~-~~~~~~~~~~~~n~~~~~~~~~~~lp~m~~~~~g~IV~isS~~  161 (305)
T PRK08303         83 RALVERIDREQGRLDILVNDIWGGEKLFEWGKPVWE-HSLDKGLRMLRLAIDTHLITSHFALPLLIRRPGGLVVEITDGT  161 (305)
T ss_pred             HHHHHHHHHHcCCccEEEECCcccccccccCCchhh-cCHHHHHHHHHHhhHHHHHHHHHHHHHhhhCCCcEEEEECCcc
Confidence            999999999999999999999 7531    123333 4678999999999999999999999999755 58999999976


Q ss_pred             ccc---cCCCCccchHHHHHHHHHHHHHHHHhCC-CeEEEEEecCccccCccc
Q 044010          187 SWL---TAPRMSFYNASKAALVLFFETLRVELGS-DVGVTIVTPGFIESELTQ  235 (248)
Q Consensus       187 ~~~---~~~~~~~Y~~sKaal~~l~~~la~~~~~-~i~v~~v~pg~v~T~~~~  235 (248)
                      +..   +.+....|++||+|+.+|+++++.|+++ +||||+|+||+++|+|..
T Consensus       162 ~~~~~~~~~~~~~Y~asKaal~~lt~~La~el~~~gIrVn~v~PG~v~T~~~~  214 (305)
T PRK08303        162 AEYNATHYRLSVFYDLAKTSVNRLAFSLAHELAPHGATAVALTPGWLRSEMML  214 (305)
T ss_pred             ccccCcCCCCcchhHHHHHHHHHHHHHHHHHhhhcCcEEEEecCCccccHHHH
Confidence            543   2345678999999999999999999987 499999999999999864

>KOG1200 consensus Mitochondrial/plastidial beta-ketoacyl-ACP reductase [Lipid transport and metabolism]

Probab=100.00  E-value=2.5e-37  Score=241.24  Aligned_cols=194  Identities=29%  Similarity=0.373  Sum_probs=173.5

Q ss_pred             CCCCCEEEEcCCCChHHHHHHHHHHHcCCeEEEEeCCcchHHHHHHHHHhhCCCcEEEEEccCCCHHHHHHHHHHHHhHc
Q 044010           44 DVSGKVVIITGASSGIGEHLAYEYARRGACLALCARREKSLEEVADTAREIGSPDVITIRADVSKVDDCRSLVEETMNHF  123 (248)
Q Consensus        44 ~~~~k~~lVtGg~~gIG~aia~~l~~~G~~V~l~~r~~~~~~~~~~~l~~~~~~~v~~~~~D~~~~~~~~~~~~~~~~~~  123 (248)
                      +++.|.++||||++|||+++++.|+++|++|++.+++....++....+...+  +-..+.||+++..+++..+++..+.+
T Consensus        11 r~~sk~~~vtGg~sGIGrAia~~la~~Garv~v~dl~~~~A~ata~~L~g~~--~h~aF~~DVS~a~~v~~~l~e~~k~~   88 (256)
T KOG1200|consen   11 RLMSKVAAVTGGSSGIGRAIAQLLAKKGARVAVADLDSAAAEATAGDLGGYG--DHSAFSCDVSKAHDVQNTLEEMEKSL   88 (256)
T ss_pred             HHhcceeEEecCCchHHHHHHHHHHhcCcEEEEeecchhhHHHHHhhcCCCC--ccceeeeccCcHHHHHHHHHHHHHhc
Confidence            5678999999999999999999999999999999999887777777665443  34568999999999999999999999


Q ss_pred             CCccEEEEccccCCcccccccCChHHHHHHHHhhhHHHHHHHHHHhhhhh--hc-CCeEEEEcCccccccCCCCccchHH
Q 044010          124 GRLDHLVNNAGISSVALFEDIVNITDFKQIMNINFWGSVYTTRFAVPHLR--YT-KGKIVVLSSAASWLTAPRMSFYNAS  200 (248)
Q Consensus       124 g~id~vv~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~--~~-~g~iV~isS~~~~~~~~~~~~Y~~s  200 (248)
                      |+++++|||||+.....+.. ...++|+..+.+|+.|.|+..|++...|.  ++ +++|||+||.-+..+.-++..|+++
T Consensus        89 g~psvlVncAGItrD~~Llr-mkq~qwd~vi~vNL~gvfl~tqaa~r~~~~~~~~~~sIiNvsSIVGkiGN~GQtnYAAs  167 (256)
T KOG1200|consen   89 GTPSVLVNCAGITRDGLLLR-MKQEQWDSVIAVNLTGVFLVTQAAVRAMVMNQQQGLSIINVSSIVGKIGNFGQTNYAAS  167 (256)
T ss_pred             CCCcEEEEcCccccccceee-ccHHHHHHHHHhhchhhHHHHHHHHHHHHHhcCCCceEEeehhhhcccccccchhhhhh
Confidence            99999999999987666665 57899999999999999999999998843  22 3599999999999999999999999


Q ss_pred             HHHHHHHHHHHHHHhCCC-eEEEEEecCccccCcccccccc
Q 044010          201 KAALVLFFETLRVELGSD-VGVTIVTPGFIESELTQGKFLT  240 (248)
Q Consensus       201 Kaal~~l~~~la~~~~~~-i~v~~v~pg~v~T~~~~~~~~~  240 (248)
                      |+++.+|+|+.|+|++++ ||||.|.||++.|||+..+++.
T Consensus       168 K~GvIgftktaArEla~knIrvN~VlPGFI~tpMT~~mp~~  208 (256)
T KOG1200|consen  168 KGGVIGFTKTAARELARKNIRVNVVLPGFIATPMTEAMPPK  208 (256)
T ss_pred             cCceeeeeHHHHHHHhhcCceEeEeccccccChhhhhcCHH
Confidence            999999999999999885 9999999999999999877543

>PRK06139 short chain dehydrogenase; Provisional

Probab=100.00  E-value=4.8e-36  Score=261.77  Aligned_cols=193  Identities=35%  Similarity=0.548  Sum_probs=176.3

Q ss_pred             ccCCCCCEEEEcCCCChHHHHHHHHHHHcCCeEEEEeCCcchHHHHHHHHHhhCCCcEEEEEccCCCHHHHHHHHHHHHh
Q 044010           42 SEDVSGKVVIITGASSGIGEHLAYEYARRGACLALCARREKSLEEVADTAREIGSPDVITIRADVSKVDDCRSLVEETMN  121 (248)
Q Consensus        42 ~~~~~~k~~lVtGg~~gIG~aia~~l~~~G~~V~l~~r~~~~~~~~~~~l~~~~~~~v~~~~~D~~~~~~~~~~~~~~~~  121 (248)
                      .+++++|+++||||++|||++++++|+++|++|++++|+.+++++..+++++.+. ++.++.+|++|.++++++++++.+
T Consensus         2 ~~~l~~k~vlITGAs~GIG~aia~~la~~G~~Vvl~~R~~~~l~~~~~~~~~~g~-~~~~~~~Dv~d~~~v~~~~~~~~~   80 (330)
T PRK06139          2 MGPLHGAVVVITGASSGIGQATAEAFARRGARLVLAARDEEALQAVAEECRALGA-EVLVVPTDVTDADQVKALATQAAS   80 (330)
T ss_pred             CcCCCCCEEEEcCCCCHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHhcCC-cEEEEEeeCCCHHHHHHHHHHHHH
Confidence            3578899999999999999999999999999999999999998888888876553 788899999999999999999999


Q ss_pred             HcCCccEEEEccccCCcccccccCChHHHHHHHHhhhHHHHHHHHHHhhhhhhc-CCeEEEEcCccccccCCCCccchHH
Q 044010          122 HFGRLDHLVNNAGISSVALFEDIVNITDFKQIMNINFWGSVYTTRFAVPHLRYT-KGKIVVLSSAASWLTAPRMSFYNAS  200 (248)
Q Consensus       122 ~~g~id~vv~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~-~g~iV~isS~~~~~~~~~~~~Y~~s  200 (248)
                      .+|++|++|||||.....++.+ .+.+++++.+++|+.+++.+++.++|.|.++ .|+||++||..+..+.|..+.|++|
T Consensus        81 ~~g~iD~lVnnAG~~~~~~~~~-~~~e~~~~~~~vN~~g~~~~~~~~lp~~~~~~~g~iV~isS~~~~~~~p~~~~Y~as  159 (330)
T PRK06139         81 FGGRIDVWVNNVGVGAVGRFEE-TPIEAHEQVIQTNLIGYMRDAHAALPIFKKQGHGIFINMISLGGFAAQPYAAAYSAS  159 (330)
T ss_pred             hcCCCCEEEECCCcCCCCCccc-CCHHHHHHHHHhhhHHHHHHHHHHHHHHHHcCCCEEEEEcChhhcCCCCCchhHHHH
Confidence            8999999999999877666655 5789999999999999999999999999765 4899999999999999999999999


Q ss_pred             HHHHHHHHHHHHHHhCC--CeEEEEEecCccccCcccc
Q 044010          201 KAALVLFFETLRVELGS--DVGVTIVTPGFIESELTQG  236 (248)
Q Consensus       201 Kaal~~l~~~la~~~~~--~i~v~~v~pg~v~T~~~~~  236 (248)
                      |+++.+|+++++.|+.+  +|+|++|+||+++|++...
T Consensus       160 Kaal~~~~~sL~~El~~~~gI~V~~v~Pg~v~T~~~~~  197 (330)
T PRK06139        160 KFGLRGFSEALRGELADHPDIHVCDVYPAFMDTPGFRH  197 (330)
T ss_pred             HHHHHHHHHHHHHHhCCCCCeEEEEEecCCccCccccc
Confidence            99999999999999975  5999999999999998753

>PRK08159 enoyl-(acyl carrier protein) reductase; Provisional

Probab=100.00  E-value=3.7e-36  Score=256.11  Aligned_cols=189  Identities=21%  Similarity=0.283  Sum_probs=162.5

Q ss_pred             cCCCCCEEEEcCCC--ChHHHHHHHHHHHcCCeEEEEeCCcchHHHHHHHHHhhCCCcEEEEEccCCCHHHHHHHHHHHH
Q 044010           43 EDVSGKVVIITGAS--SGIGEHLAYEYARRGACLALCARREKSLEEVADTAREIGSPDVITIRADVSKVDDCRSLVEETM  120 (248)
Q Consensus        43 ~~~~~k~~lVtGg~--~gIG~aia~~l~~~G~~V~l~~r~~~~~~~~~~~l~~~~~~~v~~~~~D~~~~~~~~~~~~~~~  120 (248)
                      ..++||+++||||+  +|||+++|++|+++|++|++++|+.. .++..+++.+..+ ....+++|++|+++++++++++.
T Consensus         6 ~~~~~k~~lItGas~~~GIG~aia~~la~~G~~V~l~~r~~~-~~~~~~~l~~~~~-~~~~~~~Dl~~~~~v~~~~~~~~   83 (272)
T PRK08159          6 GLMAGKRGLILGVANNRSIAWGIAKACRAAGAELAFTYQGDA-LKKRVEPLAAELG-AFVAGHCDVTDEASIDAVFETLE   83 (272)
T ss_pred             ccccCCEEEEECCCCCCcHHHHHHHHHHHCCCEEEEEcCchH-HHHHHHHHHHhcC-CceEEecCCCCHHHHHHHHHHHH
Confidence            45789999999997  89999999999999999999988632 2333344433322 35578999999999999999999


Q ss_pred             hHcCCccEEEEccccCCc----ccccccCChHHHHHHHHhhhHHHHHHHHHHhhhhhhcCCeEEEEcCccccccCCCCcc
Q 044010          121 NHFGRLDHLVNNAGISSV----ALFEDIVNITDFKQIMNINFWGSVYTTRFAVPHLRYTKGKIVVLSSAASWLTAPRMSF  196 (248)
Q Consensus       121 ~~~g~id~vv~~ag~~~~----~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~g~iV~isS~~~~~~~~~~~~  196 (248)
                      +++|++|++|||||+..+    .++.+ .+.++|++.+++|+.+++.+++.+.|.|. ++|+||++||.++..+.|++..
T Consensus        84 ~~~g~iD~lv~nAG~~~~~~~~~~~~~-~~~~~~~~~~~vN~~~~~~l~~~~~~~~~-~~g~Iv~iss~~~~~~~p~~~~  161 (272)
T PRK08159         84 KKWGKLDFVVHAIGFSDKDELTGRYVD-TSRDNFTMTMDISVYSFTAVAQRAEKLMT-DGGSILTLTYYGAEKVMPHYNV  161 (272)
T ss_pred             HhcCCCcEEEECCcccCccccccCccc-CCHHHHHHHHhHHHHHHHHHHHHHHHhcC-CCceEEEEeccccccCCCcchh
Confidence            999999999999998653    23333 57799999999999999999999999986 4689999999988888899999


Q ss_pred             chHHHHHHHHHHHHHHHHhCCC-eEEEEEecCccccCccc
Q 044010          197 YNASKAALVLFFETLRVELGSD-VGVTIVTPGFIESELTQ  235 (248)
Q Consensus       197 Y~~sKaal~~l~~~la~~~~~~-i~v~~v~pg~v~T~~~~  235 (248)
                      |++||+|+++|+++++.|++++ ||||+|+||+++|+|..
T Consensus       162 Y~asKaal~~l~~~la~el~~~gIrVn~v~PG~v~T~~~~  201 (272)
T PRK08159        162 MGVAKAALEASVKYLAVDLGPKNIRVNAISAGPIKTLAAS  201 (272)
T ss_pred             hhhHHHHHHHHHHHHHHHhcccCeEEEEeecCCcCCHHHh
Confidence            9999999999999999999875 99999999999999864

>PRK05876 short chain dehydrogenase; Provisional

Probab=100.00  E-value=5.5e-36  Score=255.41  Aligned_cols=192  Identities=28%  Similarity=0.473  Sum_probs=174.2

Q ss_pred             cCCCCCEEEEcCCCChHHHHHHHHHHHcCCeEEEEeCCcchHHHHHHHHHhhCCCcEEEEEccCCCHHHHHHHHHHHHhH
Q 044010           43 EDVSGKVVIITGASSGIGEHLAYEYARRGACLALCARREKSLEEVADTAREIGSPDVITIRADVSKVDDCRSLVEETMNH  122 (248)
Q Consensus        43 ~~~~~k~~lVtGg~~gIG~aia~~l~~~G~~V~l~~r~~~~~~~~~~~l~~~~~~~v~~~~~D~~~~~~~~~~~~~~~~~  122 (248)
                      .+++||+++||||++|||+++|++|+++|++|++++|+.+++++..+++++.+. ++.++.+|++|.++++++++++.+.
T Consensus         2 ~~~~~k~vlVTGas~gIG~ala~~La~~G~~Vv~~~r~~~~l~~~~~~l~~~~~-~~~~~~~Dv~d~~~v~~~~~~~~~~   80 (275)
T PRK05876          2 DGFPGRGAVITGGASGIGLATGTEFARRGARVVLGDVDKPGLRQAVNHLRAEGF-DVHGVMCDVRHREEVTHLADEAFRL   80 (275)
T ss_pred             CCcCCCEEEEeCCCchHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcCC-eEEEEeCCCCCHHHHHHHHHHHHHH
Confidence            358899999999999999999999999999999999998888887777765543 6888999999999999999999999


Q ss_pred             cCCccEEEEccccCCcccccccCChHHHHHHHHhhhHHHHHHHHHHhhhhhhc--CCeEEEEcCccccccCCCCccchHH
Q 044010          123 FGRLDHLVNNAGISSVALFEDIVNITDFKQIMNINFWGSVYTTRFAVPHLRYT--KGKIVVLSSAASWLTAPRMSFYNAS  200 (248)
Q Consensus       123 ~g~id~vv~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~--~g~iV~isS~~~~~~~~~~~~Y~~s  200 (248)
                      +|++|++|||||.....+..+ .+.++|++.+++|+.+++.+++.++|.|.++  +|+||++||.++..+.++...|++|
T Consensus        81 ~g~id~li~nAg~~~~~~~~~-~~~~~~~~~~~~N~~g~~~l~~~~~p~m~~~~~~g~iv~isS~~~~~~~~~~~~Y~as  159 (275)
T PRK05876         81 LGHVDVVFSNAGIVVGGPIVE-MTHDDWRWVIDVDLWGSIHTVEAFLPRLLEQGTGGHVVFTASFAGLVPNAGLGAYGVA  159 (275)
T ss_pred             cCCCCEEEECCCcCCCCCccc-CCHHHHHHHHhhhhHHHHHHHHHHHHHHHhcCCCCEEEEeCChhhccCCCCCchHHHH
Confidence            999999999999876665555 5779999999999999999999999998654  5899999999999999999999999


Q ss_pred             HHHHHHHHHHHHHHhCC-CeEEEEEecCccccCcccc
Q 044010          201 KAALVLFFETLRVELGS-DVGVTIVTPGFIESELTQG  236 (248)
Q Consensus       201 Kaal~~l~~~la~~~~~-~i~v~~v~pg~v~T~~~~~  236 (248)
                      |+++++++++++.|+++ +|+|++|+||+++|++..+
T Consensus       160 K~a~~~~~~~l~~e~~~~gi~v~~v~Pg~v~t~~~~~  196 (275)
T PRK05876        160 KYGVVGLAETLAREVTADGIGVSVLCPMVVETNLVAN  196 (275)
T ss_pred             HHHHHHHHHHHHHHhhhcCcEEEEEEeCccccccccc
Confidence            99999999999999976 4999999999999998654

>PLN02780 ketoreductase/ oxidoreductase

Probab=100.00  E-value=1.3e-35  Score=258.12  Aligned_cols=187  Identities=27%  Similarity=0.439  Sum_probs=158.8

Q ss_pred             CCCEEEEcCCCChHHHHHHHHHHHcCCeEEEEeCCcchHHHHHHHHHhhCC-CcEEEEEccCCCHHHHHHHHHHHHhHcC
Q 044010           46 SGKVVIITGASSGIGEHLAYEYARRGACLALCARREKSLEEVADTAREIGS-PDVITIRADVSKVDDCRSLVEETMNHFG  124 (248)
Q Consensus        46 ~~k~~lVtGg~~gIG~aia~~l~~~G~~V~l~~r~~~~~~~~~~~l~~~~~-~~v~~~~~D~~~~~~~~~~~~~~~~~~g  124 (248)
                      .||+++||||++|||+++|++|+++|++|++++|+++++++..+++++.++ .++..+.+|+++  ++.+.++++.+.++
T Consensus        52 ~g~~~lITGAs~GIG~alA~~La~~G~~Vil~~R~~~~l~~~~~~l~~~~~~~~~~~~~~Dl~~--~~~~~~~~l~~~~~  129 (320)
T PLN02780         52 YGSWALVTGPTDGIGKGFAFQLARKGLNLVLVARNPDKLKDVSDSIQSKYSKTQIKTVVVDFSG--DIDEGVKRIKETIE  129 (320)
T ss_pred             cCCEEEEeCCCcHHHHHHHHHHHHCCCCEEEEECCHHHHHHHHHHHHHHCCCcEEEEEEEECCC--CcHHHHHHHHHHhc
Confidence            689999999999999999999999999999999999999998888876543 467889999985  33444444444444


Q ss_pred             --CccEEEEccccCCc--ccccccCChHHHHHHHHhhhHHHHHHHHHHhhhhhhc-CCeEEEEcCccccc-c-CCCCccc
Q 044010          125 --RLDHLVNNAGISSV--ALFEDIVNITDFKQIMNINFWGSVYTTRFAVPHLRYT-KGKIVVLSSAASWL-T-APRMSFY  197 (248)
Q Consensus       125 --~id~vv~~ag~~~~--~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~-~g~iV~isS~~~~~-~-~~~~~~Y  197 (248)
                        ++|++|||||...+  ..+.+ .+.+++++.+++|+.|++.+++.++|.|.++ +|+||++||.++.. + .|....|
T Consensus       130 ~~didilVnnAG~~~~~~~~~~~-~~~~~~~~~~~vN~~g~~~l~~~~lp~m~~~~~g~IV~iSS~a~~~~~~~p~~~~Y  208 (320)
T PLN02780        130 GLDVGVLINNVGVSYPYARFFHE-VDEELLKNLIKVNVEGTTKVTQAVLPGMLKRKKGAIINIGSGAAIVIPSDPLYAVY  208 (320)
T ss_pred             CCCccEEEEecCcCCCCCccccc-CCHHHHHHHHHHhHHHHHHHHHHHHHHHHhcCCcEEEEEechhhccCCCCccchHH
Confidence              56799999998643  23334 5789999999999999999999999998654 59999999998864 3 5788999


Q ss_pred             hHHHHHHHHHHHHHHHHhCC-CeEEEEEecCccccCccc
Q 044010          198 NASKAALVLFFETLRVELGS-DVGVTIVTPGFIESELTQ  235 (248)
Q Consensus       198 ~~sKaal~~l~~~la~~~~~-~i~v~~v~pg~v~T~~~~  235 (248)
                      ++||+++++++++++.|+++ +|+|++|+||+++|+|.+
T Consensus       209 ~aSKaal~~~~~~L~~El~~~gI~V~~v~PG~v~T~~~~  247 (320)
T PLN02780        209 AATKAYIDQFSRCLYVEYKKSGIDVQCQVPLYVATKMAS  247 (320)
T ss_pred             HHHHHHHHHHHHHHHHHHhccCeEEEEEeeCceecCccc
Confidence            99999999999999999987 599999999999999976

>TIGR03325 BphB_TodD cis-2,3-dihydrobiphenyl-2,3-diol dehydrogenase

Probab=100.00  E-value=4.7e-36  Score=253.70  Aligned_cols=190  Identities=28%  Similarity=0.464  Sum_probs=164.3

Q ss_pred             cCCCCCEEEEcCCCChHHHHHHHHHHHcCCeEEEEeCCcchHHHHHHHHHhhCCCcEEEEEccCCCHHHHHHHHHHHHhH
Q 044010           43 EDVSGKVVIITGASSGIGEHLAYEYARRGACLALCARREKSLEEVADTAREIGSPDVITIRADVSKVDDCRSLVEETMNH  122 (248)
Q Consensus        43 ~~~~~k~~lVtGg~~gIG~aia~~l~~~G~~V~l~~r~~~~~~~~~~~l~~~~~~~v~~~~~D~~~~~~~~~~~~~~~~~  122 (248)
                      |++++|+++||||++|||++++++|+++|++|++++|+.+..++..+    ..+.++..+.+|+++.++++++++++.++
T Consensus         1 m~~~~k~vlItGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~l~~----~~~~~~~~~~~D~~~~~~~~~~~~~~~~~   76 (262)
T TIGR03325         1 MRLKGEVVLVTGGASGLGRAIVDRFVAEGARVAVLDKSAAGLQELEA----AHGDAVVGVEGDVRSLDDHKEAVARCVAA   76 (262)
T ss_pred             CCcCCcEEEEECCCChHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHh----hcCCceEEEEeccCCHHHHHHHHHHHHHH
Confidence            36789999999999999999999999999999999998765554432    22346888999999999999999999999


Q ss_pred             cCCccEEEEccccCCc-ccccccCC---hHHHHHHHHhhhHHHHHHHHHHhhhhhhcCCeEEEEcCccccccCCCCccch
Q 044010          123 FGRLDHLVNNAGISSV-ALFEDIVN---ITDFKQIMNINFWGSVYTTRFAVPHLRYTKGKIVVLSSAASWLTAPRMSFYN  198 (248)
Q Consensus       123 ~g~id~vv~~ag~~~~-~~~~~~~~---~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~g~iV~isS~~~~~~~~~~~~Y~  198 (248)
                      ++++|++|||||.... .+..+...   .++|++.+++|+.+++.+++++.|.|.+.+|++|++||..+..+.++...|+
T Consensus        77 ~g~id~li~~Ag~~~~~~~~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~~~g~iv~~sS~~~~~~~~~~~~Y~  156 (262)
T TIGR03325        77 FGKIDCLIPNAGIWDYSTALVDIPDDRIDEAFDEVFHINVKGYLLAVKAALPALVASRGSVIFTISNAGFYPNGGGPLYT  156 (262)
T ss_pred             hCCCCEEEECCCCCccCCccccCCchhhhHHHHHhheeecHhHHHHHHHHHHHHhhcCCCEEEEeccceecCCCCCchhH
Confidence            9999999999997532 22222111   2579999999999999999999999976678999999999988888889999


Q ss_pred             HHHHHHHHHHHHHHHHhCCCeEEEEEecCccccCcccc
Q 044010          199 ASKAALVLFFETLRVELGSDVGVTIVTPGFIESELTQG  236 (248)
Q Consensus       199 ~sKaal~~l~~~la~~~~~~i~v~~v~pg~v~T~~~~~  236 (248)
                      +||+|+++|+++++.|++++||||+|+||+++|+|...
T Consensus       157 ~sKaa~~~l~~~la~e~~~~irvn~i~PG~i~t~~~~~  194 (262)
T TIGR03325       157 AAKHAVVGLVKELAFELAPYVRVNGVAPGGMSSDLRGP  194 (262)
T ss_pred             HHHHHHHHHHHHHHHhhccCeEEEEEecCCCcCCCccc
Confidence            99999999999999999888999999999999998653

Members of this family occur as the BphD protein of biphenyl catabolism and as the TodD protein of toluene catabolism. Members catalyze the second step in each pathway and proved interchangeable when tested; the first and fourth enzymes in each pathway confer metabolic specificity. In the context of biphenyl degradation, the enzyme acts as cis-2,3-dihydrobiphenyl-2,3-diol dehydrogenase (EC 1.3.1.56), while in toluene degradation it acts as cis-toluene dihydrodiol dehydrogenase.

>PRK06200 2,3-dihydroxy-2,3-dihydrophenylpropionate dehydrogenase; Provisional

Probab=100.00  E-value=6.6e-36  Score=252.84  Aligned_cols=187  Identities=30%  Similarity=0.469  Sum_probs=164.9

Q ss_pred             CCCCCEEEEcCCCChHHHHHHHHHHHcCCeEEEEeCCcchHHHHHHHHHhhCCCcEEEEEccCCCHHHHHHHHHHHHhHc
Q 044010           44 DVSGKVVIITGASSGIGEHLAYEYARRGACLALCARREKSLEEVADTAREIGSPDVITIRADVSKVDDCRSLVEETMNHF  123 (248)
Q Consensus        44 ~~~~k~~lVtGg~~gIG~aia~~l~~~G~~V~l~~r~~~~~~~~~~~l~~~~~~~v~~~~~D~~~~~~~~~~~~~~~~~~  123 (248)
                      .+++|+++||||++|||++++++|+++|++|++++|+.++.++..+++    +.++.++++|++|.++++++++++.+++
T Consensus         3 ~~~~k~vlVtGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~----~~~~~~~~~D~~~~~~~~~~~~~~~~~~   78 (263)
T PRK06200          3 WLHGQVALITGGGSGIGRALVERFLAEGARVAVLERSAEKLASLRQRF----GDHVLVVEGDVTSYADNQRAVDQTVDAF   78 (263)
T ss_pred             CCCCCEEEEeCCCchHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHh----CCcceEEEccCCCHHHHHHHHHHHHHhc
Confidence            578999999999999999999999999999999999987666554433    2367889999999999999999999999


Q ss_pred             CCccEEEEccccCCc-ccccccCChHH----HHHHHHhhhHHHHHHHHHHhhhhhhcCCeEEEEcCccccccCCCCccch
Q 044010          124 GRLDHLVNNAGISSV-ALFEDIVNITD----FKQIMNINFWGSVYTTRFAVPHLRYTKGKIVVLSSAASWLTAPRMSFYN  198 (248)
Q Consensus       124 g~id~vv~~ag~~~~-~~~~~~~~~~~----~~~~~~~n~~~~~~l~~~~~~~~~~~~g~iV~isS~~~~~~~~~~~~Y~  198 (248)
                      |++|++|||||+... .++.+ .+.++    |++.+++|+.+++.+++.+.|.|++.+|+||++||..+..+.++...|+
T Consensus        79 g~id~li~~ag~~~~~~~~~~-~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~g~iv~~sS~~~~~~~~~~~~Y~  157 (263)
T PRK06200         79 GKLDCFVGNAGIWDYNTSLVD-IPAETLDTAFDEIFNVNVKGYLLGAKAALPALKASGGSMIFTLSNSSFYPGGGGPLYT  157 (263)
T ss_pred             CCCCEEEECCCCcccCCCccc-CChhHHHHHHHHHeeeccHhHHHHHHHHHHHHHhcCCEEEEECChhhcCCCCCCchhH
Confidence            999999999997643 22323 23343    8999999999999999999999987779999999999998888889999


Q ss_pred             HHHHHHHHHHHHHHHHhCCCeEEEEEecCccccCccc
Q 044010          199 ASKAALVLFFETLRVELGSDVGVTIVTPGFIESELTQ  235 (248)
Q Consensus       199 ~sKaal~~l~~~la~~~~~~i~v~~v~pg~v~T~~~~  235 (248)
                      +||+|+++++++++.|++++||||+|+||+++|+|..
T Consensus       158 ~sK~a~~~~~~~la~el~~~Irvn~i~PG~i~t~~~~  194 (263)
T PRK06200        158 ASKHAVVGLVRQLAYELAPKIRVNGVAPGGTVTDLRG  194 (263)
T ss_pred             HHHHHHHHHHHHHHHHHhcCcEEEEEeCCccccCCcC
Confidence            9999999999999999988899999999999999864

>PRK06398 aldose dehydrogenase; Validated

Probab=100.00  E-value=6.6e-36  Score=252.51  Aligned_cols=181  Identities=27%  Similarity=0.431  Sum_probs=164.4

Q ss_pred             cCCCCCEEEEcCCCChHHHHHHHHHHHcCCeEEEEeCCcchHHHHHHHHHhhCCCcEEEEEccCCCHHHHHHHHHHHHhH
Q 044010           43 EDVSGKVVIITGASSGIGEHLAYEYARRGACLALCARREKSLEEVADTAREIGSPDVITIRADVSKVDDCRSLVEETMNH  122 (248)
Q Consensus        43 ~~~~~k~~lVtGg~~gIG~aia~~l~~~G~~V~l~~r~~~~~~~~~~~l~~~~~~~v~~~~~D~~~~~~~~~~~~~~~~~  122 (248)
                      ++++||++|||||++|||+++|++|+++|++|++.+|+.+..            .++.+++||++|+++++++++++.++
T Consensus         2 ~~l~gk~vlItGas~gIG~~ia~~l~~~G~~Vi~~~r~~~~~------------~~~~~~~~D~~~~~~i~~~~~~~~~~   69 (258)
T PRK06398          2 LGLKDKVAIVTGGSQGIGKAVVNRLKEEGSNVINFDIKEPSY------------NDVDYFKVDVSNKEQVIKGIDYVISK   69 (258)
T ss_pred             CCCCCCEEEEECCCchHHHHHHHHHHHCCCeEEEEeCCcccc------------CceEEEEccCCCHHHHHHHHHHHHHH
Confidence            378999999999999999999999999999999999986431            15778999999999999999999999


Q ss_pred             cCCccEEEEccccCCcccccccCChHHHHHHHHhhhHHHHHHHHHHhhhhhhc-CCeEEEEcCccccccCCCCccchHHH
Q 044010          123 FGRLDHLVNNAGISSVALFEDIVNITDFKQIMNINFWGSVYTTRFAVPHLRYT-KGKIVVLSSAASWLTAPRMSFYNASK  201 (248)
Q Consensus       123 ~g~id~vv~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~-~g~iV~isS~~~~~~~~~~~~Y~~sK  201 (248)
                      ++++|++|||||.....+..+ .+.++|++.+++|+.+++.+++.+.|.|.+. .|+||++||..+..+.++..+|++||
T Consensus        70 ~~~id~li~~Ag~~~~~~~~~-~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~g~iv~isS~~~~~~~~~~~~Y~~sK  148 (258)
T PRK06398         70 YGRIDILVNNAGIESYGAIHA-VEEDEWDRIINVNVNGIFLMSKYTIPYMLKQDKGVIINIASVQSFAVTRNAAAYVTSK  148 (258)
T ss_pred             cCCCCEEEECCCCCCCCCccc-CCHHHHHHHHHHhhHHHHHHHHHHHHHHHHcCCeEEEEeCcchhccCCCCCchhhhhH
Confidence            999999999999876555554 5789999999999999999999999998754 48999999999998889999999999


Q ss_pred             HHHHHHHHHHHHHhCCCeEEEEEecCccccCcccc
Q 044010          202 AALVLFFETLRVELGSDVGVTIVTPGFIESELTQG  236 (248)
Q Consensus       202 aal~~l~~~la~~~~~~i~v~~v~pg~v~T~~~~~  236 (248)
                      +|+++++++++.|++++||||+|+||+++|++...
T Consensus       149 aal~~~~~~la~e~~~~i~vn~i~PG~v~T~~~~~  183 (258)
T PRK06398        149 HAVLGLTRSIAVDYAPTIRCVAVCPGSIRTPLLEW  183 (258)
T ss_pred             HHHHHHHHHHHHHhCCCCEEEEEecCCccchHHhh
Confidence            99999999999999877999999999999998754

>PRK05599 hypothetical protein; Provisional

Probab=100.00  E-value=1.3e-35  Score=249.08  Aligned_cols=188  Identities=26%  Similarity=0.355  Sum_probs=167.7

Q ss_pred             CEEEEcCCCChHHHHHHHHHHHcCCeEEEEeCCcchHHHHHHHHHhhCCCcEEEEEccCCCHHHHHHHHHHHHhHcCCcc
Q 044010           48 KVVIITGASSGIGEHLAYEYARRGACLALCARREKSLEEVADTAREIGSPDVITIRADVSKVDDCRSLVEETMNHFGRLD  127 (248)
Q Consensus        48 k~~lVtGg~~gIG~aia~~l~~~G~~V~l~~r~~~~~~~~~~~l~~~~~~~v~~~~~D~~~~~~~~~~~~~~~~~~g~id  127 (248)
                      ++++||||++|||+++|++|+ +|++|++++|+.+++++..+++++.+...+.++.||++|.++++++++++.+.+|++|
T Consensus         1 ~~vlItGas~GIG~aia~~l~-~g~~Vil~~r~~~~~~~~~~~l~~~~~~~~~~~~~Dv~d~~~v~~~~~~~~~~~g~id   79 (246)
T PRK05599          1 MSILILGGTSDIAGEIATLLC-HGEDVVLAARRPEAAQGLASDLRQRGATSVHVLSFDAQDLDTHRELVKQTQELAGEIS   79 (246)
T ss_pred             CeEEEEeCccHHHHHHHHHHh-CCCEEEEEeCCHHHHHHHHHHHHhccCCceEEEEcccCCHHHHHHHHHHHHHhcCCCC
Confidence            579999999999999999999 5999999999999998888888776654578899999999999999999999999999


Q ss_pred             EEEEccccCCcccccccCChHHHHHHHHhhhHHHHHHHHHHhhhhhhc--CCeEEEEcCccccccCCCCccchHHHHHHH
Q 044010          128 HLVNNAGISSVALFEDIVNITDFKQIMNINFWGSVYTTRFAVPHLRYT--KGKIVVLSSAASWLTAPRMSFYNASKAALV  205 (248)
Q Consensus       128 ~vv~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~--~g~iV~isS~~~~~~~~~~~~Y~~sKaal~  205 (248)
                      ++|||||.....+..+ .+.+++.+.+++|+.+++.+.+.+.|.|.++  +|+||++||.++..+.++.+.|++||+|++
T Consensus        80 ~lv~nag~~~~~~~~~-~~~~~~~~~~~~n~~~~~~~~~~~~~~m~~~~~~g~Iv~isS~~~~~~~~~~~~Y~asKaa~~  158 (246)
T PRK05599         80 LAVVAFGILGDQERAE-TDEAHAVEIATVDYTAQVSMLTVLADELRAQTAPAAIVAFSSIAGWRARRANYVYGSTKAGLD  158 (246)
T ss_pred             EEEEecCcCCCchhhh-cCcHHHHHHHHHHHHhHHHHHHHHHHHHHhcCCCCEEEEEeccccccCCcCCcchhhHHHHHH
Confidence            9999999875544433 4557788999999999999999999998654  489999999999998889999999999999


Q ss_pred             HHHHHHHHHhCC-CeEEEEEecCccccCccccc
Q 044010          206 LFFETLRVELGS-DVGVTIVTPGFIESELTQGK  237 (248)
Q Consensus       206 ~l~~~la~~~~~-~i~v~~v~pg~v~T~~~~~~  237 (248)
                      +++++++.|+++ +||||+|+||+++|+|..+.
T Consensus       159 ~~~~~la~el~~~~I~v~~v~PG~v~T~~~~~~  191 (246)
T PRK05599        159 AFCQGLADSLHGSHVRLIIARPGFVIGSMTTGM  191 (246)
T ss_pred             HHHHHHHHHhcCCCceEEEecCCcccchhhcCC
Confidence            999999999977 49999999999999987543

>PRK05872 short chain dehydrogenase; Provisional

Probab=100.00  E-value=9.6e-36  Score=256.41  Aligned_cols=192  Identities=34%  Similarity=0.518  Sum_probs=173.5

Q ss_pred             cCCCCCEEEEcCCCChHHHHHHHHHHHcCCeEEEEeCCcchHHHHHHHHHhhCCCcEEEEEccCCCHHHHHHHHHHHHhH
Q 044010           43 EDVSGKVVIITGASSGIGEHLAYEYARRGACLALCARREKSLEEVADTAREIGSPDVITIRADVSKVDDCRSLVEETMNH  122 (248)
Q Consensus        43 ~~~~~k~~lVtGg~~gIG~aia~~l~~~G~~V~l~~r~~~~~~~~~~~l~~~~~~~v~~~~~D~~~~~~~~~~~~~~~~~  122 (248)
                      .+++||++|||||++|||.+++++|+++|++|++++|+.+++++..+++..  +.++..+.+|++|.++++++++++.+.
T Consensus         5 ~~l~gk~vlItGas~gIG~~ia~~l~~~G~~V~~~~r~~~~l~~~~~~l~~--~~~~~~~~~Dv~d~~~v~~~~~~~~~~   82 (296)
T PRK05872          5 TSLAGKVVVVTGAARGIGAELARRLHARGAKLALVDLEEAELAALAAELGG--DDRVLTVVADVTDLAAMQAAAEEAVER   82 (296)
T ss_pred             CCCCCCEEEEECCCchHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHhcC--CCcEEEEEecCCCHHHHHHHHHHHHHH
Confidence            468899999999999999999999999999999999998887777766642  235677889999999999999999999


Q ss_pred             cCCccEEEEccccCCcccccccCChHHHHHHHHhhhHHHHHHHHHHhhhhhhcCCeEEEEcCccccccCCCCccchHHHH
Q 044010          123 FGRLDHLVNNAGISSVALFEDIVNITDFKQIMNINFWGSVYTTRFAVPHLRYTKGKIVVLSSAASWLTAPRMSFYNASKA  202 (248)
Q Consensus       123 ~g~id~vv~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~g~iV~isS~~~~~~~~~~~~Y~~sKa  202 (248)
                      +|++|++|||||.....++.+ .+.++|++.+++|+.+++.+++.+.|.|.+.+|+||++||..+..+.+++..|++||+
T Consensus        83 ~g~id~vI~nAG~~~~~~~~~-~~~~~~~~~~~vn~~g~~~l~~~~~~~~~~~~g~iv~isS~~~~~~~~~~~~Y~asKa  161 (296)
T PRK05872         83 FGGIDVVVANAGIASGGSVAQ-VDPDAFRRVIDVNLLGVFHTVRATLPALIERRGYVLQVSSLAAFAAAPGMAAYCASKA  161 (296)
T ss_pred             cCCCCEEEECCCcCCCcCccc-CCHHHHHHHHHHHhHHHHHHHHHHHHHHHHcCCEEEEEeCHhhcCCCCCchHHHHHHH
Confidence            999999999999876655555 5789999999999999999999999998767799999999999999999999999999


Q ss_pred             HHHHHHHHHHHHhCC-CeEEEEEecCccccCccccc
Q 044010          203 ALVLFFETLRVELGS-DVGVTIVTPGFIESELTQGK  237 (248)
Q Consensus       203 al~~l~~~la~~~~~-~i~v~~v~pg~v~T~~~~~~  237 (248)
                      ++++++++++.|+++ +|+|++|+||+++|+|.+..
T Consensus       162 al~~~~~~l~~e~~~~gi~v~~v~Pg~v~T~~~~~~  197 (296)
T PRK05872        162 GVEAFANALRLEVAHHGVTVGSAYLSWIDTDLVRDA  197 (296)
T ss_pred             HHHHHHHHHHHHHHHHCcEEEEEecCcccchhhhhc
Confidence            999999999999977 49999999999999997753

>PRK08265 short chain dehydrogenase; Provisional

Probab=100.00  E-value=1.9e-35  Score=250.08  Aligned_cols=187  Identities=26%  Similarity=0.338  Sum_probs=167.9

Q ss_pred             CCCCCEEEEcCCCChHHHHHHHHHHHcCCeEEEEeCCcchHHHHHHHHHhhCCCcEEEEEccCCCHHHHHHHHHHHHhHc
Q 044010           44 DVSGKVVIITGASSGIGEHLAYEYARRGACLALCARREKSLEEVADTAREIGSPDVITIRADVSKVDDCRSLVEETMNHF  123 (248)
Q Consensus        44 ~~~~k~~lVtGg~~gIG~aia~~l~~~G~~V~l~~r~~~~~~~~~~~l~~~~~~~v~~~~~D~~~~~~~~~~~~~~~~~~  123 (248)
                      ++++|+++||||++|||++++++|+++|++|++++|+.++.++..+++    +.++.++++|++|+++++++++++.+++
T Consensus         3 ~~~~k~vlItGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~----~~~~~~~~~Dl~~~~~~~~~~~~~~~~~   78 (261)
T PRK08265          3 GLAGKVAIVTGGATLIGAAVARALVAAGARVAIVDIDADNGAAVAASL----GERARFIATDITDDAAIERAVATVVARF   78 (261)
T ss_pred             CCCCCEEEEECCCChHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHh----CCeeEEEEecCCCHHHHHHHHHHHHHHh
Confidence            688999999999999999999999999999999999987666655544    2368899999999999999999999999


Q ss_pred             CCccEEEEccccCCcccccccCChHHHHHHHHhhhHHHHHHHHHHhhhhhhcCCeEEEEcCccccccCCCCccchHHHHH
Q 044010          124 GRLDHLVNNAGISSVALFEDIVNITDFKQIMNINFWGSVYTTRFAVPHLRYTKGKIVVLSSAASWLTAPRMSFYNASKAA  203 (248)
Q Consensus       124 g~id~vv~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~g~iV~isS~~~~~~~~~~~~Y~~sKaa  203 (248)
                      +++|++|||||....... + .+.++|++.+++|+.+++.+++++.|.|++..|+||++||.++..+.++...|+++|++
T Consensus        79 g~id~lv~~ag~~~~~~~-~-~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~g~ii~isS~~~~~~~~~~~~Y~asKaa  156 (261)
T PRK08265         79 GRVDILVNLACTYLDDGL-A-SSRADWLAALDVNLVSAAMLAQAAHPHLARGGGAIVNFTSISAKFAQTGRWLYPASKAA  156 (261)
T ss_pred             CCCCEEEECCCCCCCCcC-c-CCHHHHHHHHhHhhHHHHHHHHHHHHHHhcCCcEEEEECchhhccCCCCCchhHHHHHH
Confidence            999999999997654433 2 46799999999999999999999999987556999999999999998999999999999


Q ss_pred             HHHHHHHHHHHhCCC-eEEEEEecCccccCcccc
Q 044010          204 LVLFFETLRVELGSD-VGVTIVTPGFIESELTQG  236 (248)
Q Consensus       204 l~~l~~~la~~~~~~-i~v~~v~pg~v~T~~~~~  236 (248)
                      +++++++++.|+++. ||||+|+||+++|++...
T Consensus       157 ~~~~~~~la~e~~~~gi~vn~v~PG~~~t~~~~~  190 (261)
T PRK08265        157 IRQLTRSMAMDLAPDGIRVNSVSPGWTWSRVMDE  190 (261)
T ss_pred             HHHHHHHHHHHhcccCEEEEEEccCCccChhhhh
Confidence            999999999999874 999999999999998754

>PRK07889 enoyl-(acyl carrier protein) reductase; Provisional

Probab=100.00  E-value=1.2e-35  Score=250.78  Aligned_cols=187  Identities=23%  Similarity=0.306  Sum_probs=158.9

Q ss_pred             cCCCCCEEEEcCC--CChHHHHHHHHHHHcCCeEEEEeCCc--chHHHHHHHHHhhCCCcEEEEEccCCCHHHHHHHHHH
Q 044010           43 EDVSGKVVIITGA--SSGIGEHLAYEYARRGACLALCARRE--KSLEEVADTAREIGSPDVITIRADVSKVDDCRSLVEE  118 (248)
Q Consensus        43 ~~~~~k~~lVtGg--~~gIG~aia~~l~~~G~~V~l~~r~~--~~~~~~~~~l~~~~~~~v~~~~~D~~~~~~~~~~~~~  118 (248)
                      .++++|+++||||  ++|||+++|++|+++|++|++++|+.  +..++..+++    +.++.++.+|++|.+++++++++
T Consensus         3 ~~~~~k~~lItGa~~s~GIG~a~a~~la~~G~~v~l~~r~~~~~~~~~~~~~~----~~~~~~~~~Dv~~~~~i~~~~~~   78 (256)
T PRK07889          3 GLLEGKRILVTGVITDSSIAFHVARVAQEQGAEVVLTGFGRALRLTERIAKRL----PEPAPVLELDVTNEEHLASLADR   78 (256)
T ss_pred             ccccCCEEEEeCCCCcchHHHHHHHHHHHCCCEEEEecCccchhHHHHHHHhc----CCCCcEEeCCCCCHHHHHHHHHH
Confidence            4688999999999  89999999999999999999999864  2233333322    22567899999999999999999


Q ss_pred             HHhHcCCccEEEEccccCCc----ccccccCChHHHHHHHHhhhHHHHHHHHHHhhhhhhcCCeEEEEcCccccccCCCC
Q 044010          119 TMNHFGRLDHLVNNAGISSV----ALFEDIVNITDFKQIMNINFWGSVYTTRFAVPHLRYTKGKIVVLSSAASWLTAPRM  194 (248)
Q Consensus       119 ~~~~~g~id~vv~~ag~~~~----~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~g~iV~isS~~~~~~~~~~  194 (248)
                      +.+++|++|++|||||....    .++.+ .+.++|++.+++|+.+++.+++.++|.|+ ++|+||++|+.. ..+.+.+
T Consensus        79 ~~~~~g~iD~li~nAG~~~~~~~~~~~~~-~~~~~~~~~~~vN~~~~~~l~~~~~~~m~-~~g~Iv~is~~~-~~~~~~~  155 (256)
T PRK07889         79 VREHVDGLDGVVHSIGFAPQSALGGNFLD-APWEDVATALHVSAYSLKSLAKALLPLMN-EGGSIVGLDFDA-TVAWPAY  155 (256)
T ss_pred             HHHHcCCCcEEEEccccccccccCCCccc-CCHHHHHHHHHHHhHHHHHHHHHHHHhcc-cCceEEEEeecc-cccCCcc
Confidence            99999999999999998643    22333 47799999999999999999999999997 468999998754 4556778


Q ss_pred             ccchHHHHHHHHHHHHHHHHhCCC-eEEEEEecCccccCcccc
Q 044010          195 SFYNASKAALVLFFETLRVELGSD-VGVTIVTPGFIESELTQG  236 (248)
Q Consensus       195 ~~Y~~sKaal~~l~~~la~~~~~~-i~v~~v~pg~v~T~~~~~  236 (248)
                      ..|++||+|+++|+++++.|+++. ||||+|+||+++|+|.+.
T Consensus       156 ~~Y~asKaal~~l~~~la~el~~~gIrvn~v~PG~v~T~~~~~  198 (256)
T PRK07889        156 DWMGVAKAALESTNRYLARDLGPRGIRVNLVAAGPIRTLAAKA  198 (256)
T ss_pred             chhHHHHHHHHHHHHHHHHHhhhcCeEEEeeccCcccChhhhc
Confidence            889999999999999999999874 999999999999998654

>PRK06114 short chain dehydrogenase; Provisional

Probab=100.00  E-value=2.4e-35  Score=248.29  Aligned_cols=191  Identities=30%  Similarity=0.455  Sum_probs=168.5

Q ss_pred             cCCCCCEEEEcCCCChHHHHHHHHHHHcCCeEEEEeCCcc-hHHHHHHHHHhhCCCcEEEEEccCCCHHHHHHHHHHHHh
Q 044010           43 EDVSGKVVIITGASSGIGEHLAYEYARRGACLALCARREK-SLEEVADTAREIGSPDVITIRADVSKVDDCRSLVEETMN  121 (248)
Q Consensus        43 ~~~~~k~~lVtGg~~gIG~aia~~l~~~G~~V~l~~r~~~-~~~~~~~~l~~~~~~~v~~~~~D~~~~~~~~~~~~~~~~  121 (248)
                      .++++|+++||||++|||+++|++|+++|++|++++|+.+ ..++..+++++.+. ++..+.+|++|+++++++++++.+
T Consensus         4 ~~~~~k~~lVtG~s~gIG~~ia~~l~~~G~~v~~~~r~~~~~~~~~~~~l~~~~~-~~~~~~~D~~~~~~i~~~~~~~~~   82 (254)
T PRK06114          4 FDLDGQVAFVTGAGSGIGQRIAIGLAQAGADVALFDLRTDDGLAETAEHIEAAGR-RAIQIAADVTSKADLRAAVARTEA   82 (254)
T ss_pred             cCCCCCEEEEECCCchHHHHHHHHHHHCCCEEEEEeCCcchHHHHHHHHHHhcCC-ceEEEEcCCCCHHHHHHHHHHHHH
Confidence            3689999999999999999999999999999999999764 45666666765543 688899999999999999999999


Q ss_pred             HcCCccEEEEccccCCcccccccCChHHHHHHHHhhhHHHHHHHHHHhhhhhhc-CCeEEEEcCccccccCCC--Cccch
Q 044010          122 HFGRLDHLVNNAGISSVALFEDIVNITDFKQIMNINFWGSVYTTRFAVPHLRYT-KGKIVVLSSAASWLTAPR--MSFYN  198 (248)
Q Consensus       122 ~~g~id~vv~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~-~g~iV~isS~~~~~~~~~--~~~Y~  198 (248)
                      .+|++|++|||||.....+..+ .+.++|++.+++|+.+++.+.+++.|.|.++ +|+||++||..+..+.++  ...|+
T Consensus        83 ~~g~id~li~~ag~~~~~~~~~-~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~iv~isS~~~~~~~~~~~~~~Y~  161 (254)
T PRK06114         83 ELGALTLAVNAAGIANANPAEE-MEEEQWQTVMDINLTGVFLSCQAEARAMLENGGGSIVNIASMSGIIVNRGLLQAHYN  161 (254)
T ss_pred             HcCCCCEEEECCCCCCCCChHh-CCHHHHHHHHhhcchhhHHHHHHHHHHHHhcCCcEEEEECchhhcCCCCCCCcchHH
Confidence            9999999999999876655544 5789999999999999999999999998654 489999999988776553  67999


Q ss_pred             HHHHHHHHHHHHHHHHhCC-CeEEEEEecCccccCccc
Q 044010          199 ASKAALVLFFETLRVELGS-DVGVTIVTPGFIESELTQ  235 (248)
Q Consensus       199 ~sKaal~~l~~~la~~~~~-~i~v~~v~pg~v~T~~~~  235 (248)
                      ++|+|+++++++++.|+++ +||||+|+||+++|+|..
T Consensus       162 ~sKaa~~~l~~~la~e~~~~gi~v~~v~PG~i~t~~~~  199 (254)
T PRK06114        162 ASKAGVIHLSKSLAMEWVGRGIRVNSISPGYTATPMNT  199 (254)
T ss_pred             HHHHHHHHHHHHHHHHHhhcCeEEEEEeecCccCcccc
Confidence            9999999999999999987 499999999999999975

>PRK12747 short chain dehydrogenase; Provisional

Probab=100.00  E-value=2.9e-35  Score=247.35  Aligned_cols=190  Identities=29%  Similarity=0.474  Sum_probs=164.8

Q ss_pred             CCCCEEEEcCCCChHHHHHHHHHHHcCCeEEEEe-CCcchHHHHHHHHHhhCCCcEEEEEccCCCHHHHHHHHHHHHhH-
Q 044010           45 VSGKVVIITGASSGIGEHLAYEYARRGACLALCA-RREKSLEEVADTAREIGSPDVITIRADVSKVDDCRSLVEETMNH-  122 (248)
Q Consensus        45 ~~~k~~lVtGg~~gIG~aia~~l~~~G~~V~l~~-r~~~~~~~~~~~l~~~~~~~v~~~~~D~~~~~~~~~~~~~~~~~-  122 (248)
                      +++|+++||||++|||.+++++|+++|++|++.+ |+.++.++..++++..+. ++..+.+|+++.++++.+++++.+. 
T Consensus         2 ~~~k~~lItGas~gIG~~ia~~l~~~G~~v~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~D~~~~~~~~~~~~~~~~~~   80 (252)
T PRK12747          2 LKGKVALVTGASRGIGRAIAKRLANDGALVAIHYGNRKEEAEETVYEIQSNGG-SAFSIGANLESLHGVEALYSSLDNEL   80 (252)
T ss_pred             CCCCEEEEeCCCChHHHHHHHHHHHCCCeEEEEcCCCHHHHHHHHHHHHhcCC-ceEEEecccCCHHHHHHHHHHHHHHh
Confidence            4689999999999999999999999999998875 566666666666765443 6778999999999999999988763 


Q ss_pred             ---cC--CccEEEEccccCCcccccccCChHHHHHHHHhhhHHHHHHHHHHhhhhhhcCCeEEEEcCccccccCCCCccc
Q 044010          123 ---FG--RLDHLVNNAGISSVALFEDIVNITDFKQIMNINFWGSVYTTRFAVPHLRYTKGKIVVLSSAASWLTAPRMSFY  197 (248)
Q Consensus       123 ---~g--~id~vv~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~g~iV~isS~~~~~~~~~~~~Y  197 (248)
                         ++  ++|++|||||.....+..+ .+.++|++.+++|+.+++.+++.++|.|.+ .|+||++||..+..+.++..+|
T Consensus        81 ~~~~g~~~id~lv~~Ag~~~~~~~~~-~~~~~~~~~~~vN~~~~~~l~~~~~~~~~~-~g~iv~isS~~~~~~~~~~~~Y  158 (252)
T PRK12747         81 QNRTGSTKFDILINNAGIGPGAFIEE-TTEQFFDRMVSVNAKAPFFIIQQALSRLRD-NSRIINISSAATRISLPDFIAY  158 (252)
T ss_pred             hhhcCCCCCCEEEECCCcCCCCCccc-CCHHHHHHHHHHhhhHHHHHHHHHHHHhhc-CCeEEEECCcccccCCCCchhH
Confidence               34  8999999999865444444 577999999999999999999999999864 5899999999999998999999


Q ss_pred             hHHHHHHHHHHHHHHHHhCCC-eEEEEEecCccccCccccc
Q 044010          198 NASKAALVLFFETLRVELGSD-VGVTIVTPGFIESELTQGK  237 (248)
Q Consensus       198 ~~sKaal~~l~~~la~~~~~~-i~v~~v~pg~v~T~~~~~~  237 (248)
                      ++||+++++++++++.|++++ ||||+|+||+|+|+|....
T Consensus       159 ~~sKaa~~~~~~~la~e~~~~girvn~v~Pg~v~t~~~~~~  199 (252)
T PRK12747        159 SMTKGAINTMTFTLAKQLGARGITVNAILPGFIKTDMNAEL  199 (252)
T ss_pred             HHHHHHHHHHHHHHHHHHhHcCCEEEEEecCCccCchhhhc
Confidence            999999999999999999874 9999999999999997643

>PRK08085 gluconate 5-dehydrogenase; Provisional

Probab=100.00  E-value=2.8e-35  Score=247.65  Aligned_cols=193  Identities=24%  Similarity=0.362  Sum_probs=173.7

Q ss_pred             cCCCCCEEEEcCCCChHHHHHHHHHHHcCCeEEEEeCCcchHHHHHHHHHhhCCCcEEEEEccCCCHHHHHHHHHHHHhH
Q 044010           43 EDVSGKVVIITGASSGIGEHLAYEYARRGACLALCARREKSLEEVADTAREIGSPDVITIRADVSKVDDCRSLVEETMNH  122 (248)
Q Consensus        43 ~~~~~k~~lVtGg~~gIG~aia~~l~~~G~~V~l~~r~~~~~~~~~~~l~~~~~~~v~~~~~D~~~~~~~~~~~~~~~~~  122 (248)
                      .++++|++|||||++|||++++++|+++|++|++.+|+.++.++..++++..+ .++..+.+|++|.++++++++++.+.
T Consensus         5 ~~l~~k~~lItGas~giG~~ia~~L~~~G~~vvl~~r~~~~~~~~~~~l~~~~-~~~~~~~~Dl~~~~~~~~~~~~~~~~   83 (254)
T PRK08085          5 FSLAGKNILITGSAQGIGFLLATGLAEYGAEIIINDITAERAELAVAKLRQEG-IKAHAAPFNVTHKQEVEAAIEHIEKD   83 (254)
T ss_pred             ccCCCCEEEEECCCChHHHHHHHHHHHcCCEEEEEcCCHHHHHHHHHHHHhcC-CeEEEEecCCCCHHHHHHHHHHHHHh
Confidence            36789999999999999999999999999999999999888888877776654 36788999999999999999999999


Q ss_pred             cCCccEEEEccccCCcccccccCChHHHHHHHHhhhHHHHHHHHHHhhhhhhc-CCeEEEEcCccccccCCCCccchHHH
Q 044010          123 FGRLDHLVNNAGISSVALFEDIVNITDFKQIMNINFWGSVYTTRFAVPHLRYT-KGKIVVLSSAASWLTAPRMSFYNASK  201 (248)
Q Consensus       123 ~g~id~vv~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~-~g~iV~isS~~~~~~~~~~~~Y~~sK  201 (248)
                      ++++|++|||+|.....+..+ .+.++|++.+++|+.+++.+.+++.+.+.++ .|+||++||..+..+.++...|+++|
T Consensus        84 ~~~id~vi~~ag~~~~~~~~~-~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~iv~isS~~~~~~~~~~~~Y~~sK  162 (254)
T PRK08085         84 IGPIDVLINNAGIQRRHPFTE-FPEQEWNDVIAVNQTAVFLVSQAVARYMVKRQAGKIINICSMQSELGRDTITPYAASK  162 (254)
T ss_pred             cCCCCEEEECCCcCCCCChhh-CCHHHHHHHHHHHhHHHHHHHHHHHHHHHHcCCcEEEEEccchhccCCCCCcchHHHH
Confidence            999999999999876555554 5779999999999999999999999998644 48999999998888888899999999


Q ss_pred             HHHHHHHHHHHHHhCC-CeEEEEEecCccccCccccc
Q 044010          202 AALVLFFETLRVELGS-DVGVTIVTPGFIESELTQGK  237 (248)
Q Consensus       202 aal~~l~~~la~~~~~-~i~v~~v~pg~v~T~~~~~~  237 (248)
                      ++++++++++++++++ +||||+|+||+++|++....
T Consensus       163 ~a~~~~~~~la~e~~~~gi~v~~v~pG~~~t~~~~~~  199 (254)
T PRK08085        163 GAVKMLTRGMCVELARHNIQVNGIAPGYFKTEMTKAL  199 (254)
T ss_pred             HHHHHHHHHHHHHHHhhCeEEEEEEeCCCCCcchhhh
Confidence            9999999999999987 59999999999999987654

>PRK06172 short chain dehydrogenase; Provisional

Probab=100.00  E-value=5.3e-35  Score=245.75  Aligned_cols=194  Identities=31%  Similarity=0.468  Sum_probs=173.8

Q ss_pred             cCCCCCEEEEcCCCChHHHHHHHHHHHcCCeEEEEeCCcchHHHHHHHHHhhCCCcEEEEEccCCCHHHHHHHHHHHHhH
Q 044010           43 EDVSGKVVIITGASSGIGEHLAYEYARRGACLALCARREKSLEEVADTAREIGSPDVITIRADVSKVDDCRSLVEETMNH  122 (248)
Q Consensus        43 ~~~~~k~~lVtGg~~gIG~aia~~l~~~G~~V~l~~r~~~~~~~~~~~l~~~~~~~v~~~~~D~~~~~~~~~~~~~~~~~  122 (248)
                      +++++|+++||||++|||.+++++|+++|++|++++|+.++.++..+++++.+ .++.++.+|+++.++++++++++.+.
T Consensus         3 ~~l~~k~ilItGas~~iG~~ia~~l~~~G~~v~~~~r~~~~~~~~~~~~~~~~-~~~~~~~~D~~~~~~i~~~~~~~~~~   81 (253)
T PRK06172          3 MTFSGKVALVTGGAAGIGRATALAFAREGAKVVVADRDAAGGEETVALIREAG-GEALFVACDVTRDAEVKALVEQTIAA   81 (253)
T ss_pred             cCCCCCEEEEeCCCchHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHHHHhcC-CceEEEEcCCCCHHHHHHHHHHHHHH
Confidence            56889999999999999999999999999999999999988887777776654 37889999999999999999999999


Q ss_pred             cCCccEEEEccccCCcccccccCChHHHHHHHHhhhHHHHHHHHHHhhhhhhc-CCeEEEEcCccccccCCCCccchHHH
Q 044010          123 FGRLDHLVNNAGISSVALFEDIVNITDFKQIMNINFWGSVYTTRFAVPHLRYT-KGKIVVLSSAASWLTAPRMSFYNASK  201 (248)
Q Consensus       123 ~g~id~vv~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~-~g~iV~isS~~~~~~~~~~~~Y~~sK  201 (248)
                      +|++|++|||+|...........+.+++++.+++|+.+++.+.++++|.|.++ .+++|++||..+..+.++...|++||
T Consensus        82 ~g~id~li~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~~ii~~sS~~~~~~~~~~~~Y~~sK  161 (253)
T PRK06172         82 YGRLDYAFNNAGIEIEQGRLAEGSEAEFDAIMGVNVKGVWLCMKYQIPLMLAQGGGAIVNTASVAGLGAAPKMSIYAASK  161 (253)
T ss_pred             hCCCCEEEECCCCCCCCCChhhCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcCCcEEEEECchhhccCCCCCchhHHHH
Confidence            99999999999986543322335779999999999999999999999998644 48999999999999999999999999


Q ss_pred             HHHHHHHHHHHHHhCC-CeEEEEEecCccccCccccc
Q 044010          202 AALVLFFETLRVELGS-DVGVTIVTPGFIESELTQGK  237 (248)
Q Consensus       202 aal~~l~~~la~~~~~-~i~v~~v~pg~v~T~~~~~~  237 (248)
                      +++++++++++.++.+ +|+|++|+||+++|++....
T Consensus       162 aa~~~~~~~la~e~~~~~i~v~~i~PG~v~t~~~~~~  198 (253)
T PRK06172        162 HAVIGLTKSAAIEYAKKGIRVNAVCPAVIDTDMFRRA  198 (253)
T ss_pred             HHHHHHHHHHHHHhcccCeEEEEEEeCCccChhhhhh
Confidence            9999999999999987 49999999999999997754

>PRK06935 2-deoxy-D-gluconate 3-dehydrogenase; Provisional

Probab=100.00  E-value=5.8e-35  Score=246.43  Aligned_cols=191  Identities=26%  Similarity=0.419  Sum_probs=170.6

Q ss_pred             cCCCCCEEEEcCCCChHHHHHHHHHHHcCCeEEEEeCCcchHHHHHHHHHhhCCCcEEEEEccCCCHHHHHHHHHHHHhH
Q 044010           43 EDVSGKVVIITGASSGIGEHLAYEYARRGACLALCARREKSLEEVADTAREIGSPDVITIRADVSKVDDCRSLVEETMNH  122 (248)
Q Consensus        43 ~~~~~k~~lVtGg~~gIG~aia~~l~~~G~~V~l~~r~~~~~~~~~~~l~~~~~~~v~~~~~D~~~~~~~~~~~~~~~~~  122 (248)
                      .++++|++|||||++|||.+++++|+++|++|++++|+ ++.++..+.+.+.+ .++.++.+|+++.++++++++++.+.
T Consensus        11 ~~l~~k~vlItGas~gIG~~ia~~l~~~G~~v~~~~~~-~~~~~~~~~~~~~~-~~~~~~~~D~~~~~~i~~~~~~~~~~   88 (258)
T PRK06935         11 FSLDGKVAIVTGGNTGLGQGYAVALAKAGADIIITTHG-TNWDETRRLIEKEG-RKVTFVQVDLTKPESAEKVVKEALEE   88 (258)
T ss_pred             ccCCCCEEEEeCCCchHHHHHHHHHHHCCCEEEEEeCC-cHHHHHHHHHHhcC-CceEEEEcCCCCHHHHHHHHHHHHHH
Confidence            36889999999999999999999999999999999998 56666666665544 37889999999999999999999999


Q ss_pred             cCCccEEEEccccCCcccccccCChHHHHHHHHhhhHHHHHHHHHHhhhhhhc-CCeEEEEcCccccccCCCCccchHHH
Q 044010          123 FGRLDHLVNNAGISSVALFEDIVNITDFKQIMNINFWGSVYTTRFAVPHLRYT-KGKIVVLSSAASWLTAPRMSFYNASK  201 (248)
Q Consensus       123 ~g~id~vv~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~-~g~iV~isS~~~~~~~~~~~~Y~~sK  201 (248)
                      +|++|++|||+|...+.+..+ .+.++|++.+++|+.+++.+++.+.|.|.++ .|+||++||..+..+.+..+.|++||
T Consensus        89 ~g~id~li~~ag~~~~~~~~~-~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~g~iv~isS~~~~~~~~~~~~Y~asK  167 (258)
T PRK06935         89 FGKIDILVNNAGTIRRAPLLE-YKDEDWNAVMDINLNSVYHLSQAVAKVMAKQGSGKIINIASMLSFQGGKFVPAYTASK  167 (258)
T ss_pred             cCCCCEEEECCCCCCCCCccc-CCHHHHHHHHHHhCHHHHHHHHHHHHHHHhcCCeEEEEECCHHhccCCCCchhhHHHH
Confidence            999999999999876555544 4678999999999999999999999998755 48999999999988888899999999


Q ss_pred             HHHHHHHHHHHHHhCC-CeEEEEEecCccccCcccc
Q 044010          202 AALVLFFETLRVELGS-DVGVTIVTPGFIESELTQG  236 (248)
Q Consensus       202 aal~~l~~~la~~~~~-~i~v~~v~pg~v~T~~~~~  236 (248)
                      ++++++++++++|+++ +||||+|+||+++|++.+.
T Consensus       168 ~a~~~~~~~la~e~~~~gi~v~~i~PG~v~t~~~~~  203 (258)
T PRK06935        168 HGVAGLTKAFANELAAYNIQVNAIAPGYIKTANTAP  203 (258)
T ss_pred             HHHHHHHHHHHHHhhhhCeEEEEEEeccccccchhh
Confidence            9999999999999987 5999999999999998654

>PRK07035 short chain dehydrogenase; Provisional

Probab=100.00  E-value=7.4e-35  Score=244.74  Aligned_cols=193  Identities=24%  Similarity=0.397  Sum_probs=172.2

Q ss_pred             cCCCCCEEEEcCCCChHHHHHHHHHHHcCCeEEEEeCCcchHHHHHHHHHhhCCCcEEEEEccCCCHHHHHHHHHHHHhH
Q 044010           43 EDVSGKVVIITGASSGIGEHLAYEYARRGACLALCARREKSLEEVADTAREIGSPDVITIRADVSKVDDCRSLVEETMNH  122 (248)
Q Consensus        43 ~~~~~k~~lVtGg~~gIG~aia~~l~~~G~~V~l~~r~~~~~~~~~~~l~~~~~~~v~~~~~D~~~~~~~~~~~~~~~~~  122 (248)
                      +++++|+++||||++|||.+++++|+++|++|++++|+.++.++..+++.+.+. ++.++.+|+++.++++++++++.+.
T Consensus         4 ~~l~~k~vlItGas~gIG~~l~~~l~~~G~~Vi~~~r~~~~~~~~~~~~~~~~~-~~~~~~~D~~~~~~~~~~~~~~~~~   82 (252)
T PRK07035          4 FDLTGKIALVTGASRGIGEAIAKLLAQQGAHVIVSSRKLDGCQAVADAIVAAGG-KAEALACHIGEMEQIDALFAHIRER   82 (252)
T ss_pred             cccCCCEEEEECCCcHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcCC-eEEEEEcCCCCHHHHHHHHHHHHHH
Confidence            368899999999999999999999999999999999998888887777765543 6788999999999999999999999


Q ss_pred             cCCccEEEEccccCCc-ccccccCChHHHHHHHHhhhHHHHHHHHHHhhhhhhc-CCeEEEEcCccccccCCCCccchHH
Q 044010          123 FGRLDHLVNNAGISSV-ALFEDIVNITDFKQIMNINFWGSVYTTRFAVPHLRYT-KGKIVVLSSAASWLTAPRMSFYNAS  200 (248)
Q Consensus       123 ~g~id~vv~~ag~~~~-~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~-~g~iV~isS~~~~~~~~~~~~Y~~s  200 (248)
                      ++++|++|||||.... .+..+ .+.+++++.+++|+.+++.++++++|.|++. .++++++||..+..+.++.+.|++|
T Consensus        83 ~~~id~li~~ag~~~~~~~~~~-~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~iv~~sS~~~~~~~~~~~~Y~~s  161 (252)
T PRK07035         83 HGRLDILVNNAAANPYFGHILD-TDLGAFQKTVDVNIRGYFFMSVEAGKLMKEQGGGSIVNVASVNGVSPGDFQGIYSIT  161 (252)
T ss_pred             cCCCCEEEECCCcCCCCCCccc-CCHHHHHHHHHHhhHHHHHHHHHHHHHHHhCCCcEEEEECchhhcCCCCCCcchHHH
Confidence            9999999999997542 33333 5779999999999999999999999998754 4899999999998888899999999


Q ss_pred             HHHHHHHHHHHHHHhCCC-eEEEEEecCccccCccccc
Q 044010          201 KAALVLFFETLRVELGSD-VGVTIVTPGFIESELTQGK  237 (248)
Q Consensus       201 Kaal~~l~~~la~~~~~~-i~v~~v~pg~v~T~~~~~~  237 (248)
                      |+++++++++++++++++ |+|++|+||+++|++....
T Consensus       162 K~al~~~~~~l~~e~~~~gi~v~~i~PG~v~t~~~~~~  199 (252)
T PRK07035        162 KAAVISMTKAFAKECAPFGIRVNALLPGLTDTKFASAL  199 (252)
T ss_pred             HHHHHHHHHHHHHHHhhcCEEEEEEeeccccCcccccc
Confidence            999999999999999874 9999999999999987654

>PRK08993 2-deoxy-D-gluconate 3-dehydrogenase; Validated

Probab=100.00  E-value=7e-35  Score=245.41  Aligned_cols=191  Identities=26%  Similarity=0.435  Sum_probs=167.7

Q ss_pred             cCCCCCEEEEcCCCChHHHHHHHHHHHcCCeEEEEeCCcchHHHHHHHHHhhCCCcEEEEEccCCCHHHHHHHHHHHHhH
Q 044010           43 EDVSGKVVIITGASSGIGEHLAYEYARRGACLALCARREKSLEEVADTAREIGSPDVITIRADVSKVDDCRSLVEETMNH  122 (248)
Q Consensus        43 ~~~~~k~~lVtGg~~gIG~aia~~l~~~G~~V~l~~r~~~~~~~~~~~l~~~~~~~v~~~~~D~~~~~~~~~~~~~~~~~  122 (248)
                      ++++||+++||||++|||.+++++|+++|++|++++++..  ++..+.+++.+ .++..+++|++|.++++++++++.++
T Consensus         6 ~~l~~k~~lItG~~~gIG~a~a~~l~~~G~~vv~~~~~~~--~~~~~~~~~~~-~~~~~~~~Dl~~~~~~~~~~~~~~~~   82 (253)
T PRK08993          6 FSLEGKVAVVTGCDTGLGQGMALGLAEAGCDIVGINIVEP--TETIEQVTALG-RRFLSLTADLRKIDGIPALLERAVAE   82 (253)
T ss_pred             cCCCCCEEEEECCCchHHHHHHHHHHHCCCEEEEecCcch--HHHHHHHHhcC-CeEEEEECCCCCHHHHHHHHHHHHHH
Confidence            4689999999999999999999999999999998877542  34445555443 36888999999999999999999999


Q ss_pred             cCCccEEEEccccCCcccccccCChHHHHHHHHhhhHHHHHHHHHHhhhhhhc--CCeEEEEcCccccccCCCCccchHH
Q 044010          123 FGRLDHLVNNAGISSVALFEDIVNITDFKQIMNINFWGSVYTTRFAVPHLRYT--KGKIVVLSSAASWLTAPRMSFYNAS  200 (248)
Q Consensus       123 ~g~id~vv~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~--~g~iV~isS~~~~~~~~~~~~Y~~s  200 (248)
                      ++++|++|||||.....+..+ .+.++|++.+++|+.+++.+.+++.|.|.++  +|+||++||..+..+.+....|++|
T Consensus        83 ~~~~D~li~~Ag~~~~~~~~~-~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~~~~~g~iv~isS~~~~~~~~~~~~Y~~s  161 (253)
T PRK08993         83 FGHIDILVNNAGLIRREDAIE-FSEKDWDDVMNLNIKSVFFMSQAAAKHFIAQGNGGKIINIASMLSFQGGIRVPSYTAS  161 (253)
T ss_pred             hCCCCEEEECCCCCCCCCccc-CCHHHHHHHHhhhhHHHHHHHHHHHHHHHhCCCCeEEEEECchhhccCCCCCcchHHH
Confidence            999999999999876555554 5779999999999999999999999998654  4899999999999888888999999


Q ss_pred             HHHHHHHHHHHHHHhCC-CeEEEEEecCccccCccccc
Q 044010          201 KAALVLFFETLRVELGS-DVGVTIVTPGFIESELTQGK  237 (248)
Q Consensus       201 Kaal~~l~~~la~~~~~-~i~v~~v~pg~v~T~~~~~~  237 (248)
                      |+|+++++++++.|+.+ +|+||+|+||+++|++....
T Consensus       162 Kaa~~~~~~~la~e~~~~gi~v~~v~pG~v~T~~~~~~  199 (253)
T PRK08993        162 KSGVMGVTRLMANEWAKHNINVNAIAPGYMATNNTQQL  199 (253)
T ss_pred             HHHHHHHHHHHHHHhhhhCeEEEEEeeCcccCcchhhh
Confidence            99999999999999987 59999999999999987643

>PRK08277 D-mannonate oxidoreductase; Provisional

Probab=100.00  E-value=7.3e-35  Score=248.38  Aligned_cols=194  Identities=25%  Similarity=0.403  Sum_probs=172.3

Q ss_pred             cCCCCCEEEEcCCCChHHHHHHHHHHHcCCeEEEEeCCcchHHHHHHHHHhhCCCcEEEEEccCCCHHHHHHHHHHHHhH
Q 044010           43 EDVSGKVVIITGASSGIGEHLAYEYARRGACLALCARREKSLEEVADTAREIGSPDVITIRADVSKVDDCRSLVEETMNH  122 (248)
Q Consensus        43 ~~~~~k~~lVtGg~~gIG~aia~~l~~~G~~V~l~~r~~~~~~~~~~~l~~~~~~~v~~~~~D~~~~~~~~~~~~~~~~~  122 (248)
                      .++++|+++||||++|||++++++|+++|++|++++|+.++.++..+++++.+. ++.++.+|+++.+++.++++++.++
T Consensus         6 ~~~~~k~vlVtGas~giG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~-~~~~~~~Dl~~~~~v~~~~~~~~~~   84 (278)
T PRK08277          6 FSLKGKVAVITGGGGVLGGAMAKELARAGAKVAILDRNQEKAEAVVAEIKAAGG-EALAVKADVLDKESLEQARQQILED   84 (278)
T ss_pred             eccCCCEEEEeCCCchHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcCC-eEEEEECCCCCHHHHHHHHHHHHHH
Confidence            367899999999999999999999999999999999998888887777766543 6889999999999999999999999


Q ss_pred             cCCccEEEEccccCCccc--------------ccccCChHHHHHHHHhhhHHHHHHHHHHhhhhhhc-CCeEEEEcCccc
Q 044010          123 FGRLDHLVNNAGISSVAL--------------FEDIVNITDFKQIMNINFWGSVYTTRFAVPHLRYT-KGKIVVLSSAAS  187 (248)
Q Consensus       123 ~g~id~vv~~ag~~~~~~--------------~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~-~g~iV~isS~~~  187 (248)
                      ++++|++|||||...+..              ...+.+.++|++.+++|+.+++.+++.+.|.|.+. .|+||++||..+
T Consensus        85 ~g~id~li~~ag~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~g~ii~isS~~~  164 (278)
T PRK08277         85 FGPCDILINGAGGNHPKATTDNEFHELIEPTKTFFDLDEEGFEFVFDLNLLGTLLPTQVFAKDMVGRKGGNIINISSMNA  164 (278)
T ss_pred             cCCCCEEEECCCCCCcccccccccccccccccccccCCHHHHHHHHhhhhHHHHHHHHHHHHHHHhcCCcEEEEEccchh
Confidence            999999999999654321              12235678999999999999999999999998755 489999999999


Q ss_pred             cccCCCCccchHHHHHHHHHHHHHHHHhCC-CeEEEEEecCccccCccccc
Q 044010          188 WLTAPRMSFYNASKAALVLFFETLRVELGS-DVGVTIVTPGFIESELTQGK  237 (248)
Q Consensus       188 ~~~~~~~~~Y~~sKaal~~l~~~la~~~~~-~i~v~~v~pg~v~T~~~~~~  237 (248)
                      ..+.++...|++||+|+++++++++.++++ +||||+|+||+++|++.+..
T Consensus       165 ~~~~~~~~~Y~~sK~a~~~l~~~la~e~~~~girvn~v~Pg~v~t~~~~~~  215 (278)
T PRK08277        165 FTPLTKVPAYSAAKAAISNFTQWLAVHFAKVGIRVNAIAPGFFLTEQNRAL  215 (278)
T ss_pred             cCCCCCCchhHHHHHHHHHHHHHHHHHhCccCeEEEEEEeccCcCcchhhh
Confidence            999999999999999999999999999987 49999999999999986644

>PRK06128 oxidoreductase; Provisional

Probab=100.00  E-value=1.5e-34  Score=249.42  Aligned_cols=191  Identities=29%  Similarity=0.449  Sum_probs=166.5

Q ss_pred             CCCCCEEEEcCCCChHHHHHHHHHHHcCCeEEEEeCCcc--hHHHHHHHHHhhCCCcEEEEEccCCCHHHHHHHHHHHHh
Q 044010           44 DVSGKVVIITGASSGIGEHLAYEYARRGACLALCARREK--SLEEVADTAREIGSPDVITIRADVSKVDDCRSLVEETMN  121 (248)
Q Consensus        44 ~~~~k~~lVtGg~~gIG~aia~~l~~~G~~V~l~~r~~~--~~~~~~~~l~~~~~~~v~~~~~D~~~~~~~~~~~~~~~~  121 (248)
                      ++++|++|||||++|||++++++|+++|++|++++++.+  ..++..+.++..+ .++.++.+|++|.++++++++++.+
T Consensus        52 ~l~~k~vlITGas~gIG~~~a~~l~~~G~~V~i~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~Dl~~~~~v~~~~~~~~~  130 (300)
T PRK06128         52 RLQGRKALITGADSGIGRATAIAFAREGADIALNYLPEEEQDAAEVVQLIQAEG-RKAVALPGDLKDEAFCRQLVERAVK  130 (300)
T ss_pred             ccCCCEEEEecCCCcHHHHHHHHHHHcCCEEEEEeCCcchHHHHHHHHHHHHcC-CeEEEEecCCCCHHHHHHHHHHHHH
Confidence            578999999999999999999999999999999887643  3444555555544 3788999999999999999999999


Q ss_pred             HcCCccEEEEccccCCcccccccCChHHHHHHHHhhhHHHHHHHHHHhhhhhhcCCeEEEEcCccccccCCCCccchHHH
Q 044010          122 HFGRLDHLVNNAGISSVALFEDIVNITDFKQIMNINFWGSVYTTRFAVPHLRYTKGKIVVLSSAASWLTAPRMSFYNASK  201 (248)
Q Consensus       122 ~~g~id~vv~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~g~iV~isS~~~~~~~~~~~~Y~~sK  201 (248)
                      .++++|++|||||.........+.+.++|++.+++|+.+++.+++++.|.|+ .+++||++||..++.+.++...|++||
T Consensus       131 ~~g~iD~lV~nAg~~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~-~~~~iv~~sS~~~~~~~~~~~~Y~asK  209 (300)
T PRK06128        131 ELGGLDILVNIAGKQTAVKDIADITTEQFDATFKTNVYAMFWLCKAAIPHLP-PGASIINTGSIQSYQPSPTLLDYASTK  209 (300)
T ss_pred             HhCCCCEEEECCcccCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHhcC-cCCEEEEECCccccCCCCCchhHHHHH
Confidence            9999999999999764333233357899999999999999999999999986 458999999999998888999999999


Q ss_pred             HHHHHHHHHHHHHhCC-CeEEEEEecCccccCcccc
Q 044010          202 AALVLFFETLRVELGS-DVGVTIVTPGFIESELTQG  236 (248)
Q Consensus       202 aal~~l~~~la~~~~~-~i~v~~v~pg~v~T~~~~~  236 (248)
                      +++++++++++.++.+ +||||+|+||+++|++...
T Consensus       210 ~a~~~~~~~la~el~~~gI~v~~v~PG~i~t~~~~~  245 (300)
T PRK06128        210 AAIVAFTKALAKQVAEKGIRVNAVAPGPVWTPLQPS  245 (300)
T ss_pred             HHHHHHHHHHHHHhhhcCcEEEEEEECcCcCCCccc
Confidence            9999999999999987 4999999999999998643

>PRK07985 oxidoreductase; Provisional

Probab=100.00  E-value=1.5e-34  Score=248.78  Aligned_cols=188  Identities=28%  Similarity=0.420  Sum_probs=164.4

Q ss_pred             CCCCCEEEEcCCCChHHHHHHHHHHHcCCeEEEEeCCc--chHHHHHHHHHhhCCCcEEEEEccCCCHHHHHHHHHHHHh
Q 044010           44 DVSGKVVIITGASSGIGEHLAYEYARRGACLALCARRE--KSLEEVADTAREIGSPDVITIRADVSKVDDCRSLVEETMN  121 (248)
Q Consensus        44 ~~~~k~~lVtGg~~gIG~aia~~l~~~G~~V~l~~r~~--~~~~~~~~~l~~~~~~~v~~~~~D~~~~~~~~~~~~~~~~  121 (248)
                      ++++|++|||||++|||+++|++|+++|++|++.+|+.  +..++..+.+++.+ .++.++.+|++|.+++.++++++.+
T Consensus        46 ~~~~k~vlITGas~gIG~aia~~L~~~G~~Vi~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~Dl~~~~~~~~~~~~~~~  124 (294)
T PRK07985         46 RLKDRKALVTGGDSGIGRAAAIAYAREGADVAISYLPVEEEDAQDVKKIIEECG-RKAVLLPGDLSDEKFARSLVHEAHK  124 (294)
T ss_pred             ccCCCEEEEECCCCcHHHHHHHHHHHCCCEEEEecCCcchhhHHHHHHHHHHcC-CeEEEEEccCCCHHHHHHHHHHHHH
Confidence            58899999999999999999999999999999988754  33445544444433 3688899999999999999999999


Q ss_pred             HcCCccEEEEccccCCc-ccccccCChHHHHHHHHhhhHHHHHHHHHHhhhhhhcCCeEEEEcCccccccCCCCccchHH
Q 044010          122 HFGRLDHLVNNAGISSV-ALFEDIVNITDFKQIMNINFWGSVYTTRFAVPHLRYTKGKIVVLSSAASWLTAPRMSFYNAS  200 (248)
Q Consensus       122 ~~g~id~vv~~ag~~~~-~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~g~iV~isS~~~~~~~~~~~~Y~~s  200 (248)
                      .+|++|++|||||.... .+..+ .+.++|++.+++|+.+++.+++++.|.|+ .+|+||++||..+..+.++..+|++|
T Consensus       125 ~~g~id~lv~~Ag~~~~~~~~~~-~~~~~~~~~~~~N~~g~~~l~~~~~~~m~-~~g~iv~iSS~~~~~~~~~~~~Y~as  202 (294)
T PRK07985        125 ALGGLDIMALVAGKQVAIPDIAD-LTSEQFQKTFAINVFALFWLTQEAIPLLP-KGASIITTSSIQAYQPSPHLLDYAAT  202 (294)
T ss_pred             HhCCCCEEEECCCCCcCCCChhh-CCHHHHHHHHHHHhHHHHHHHHHHHHhhh-cCCEEEEECCchhccCCCCcchhHHH
Confidence            99999999999997533 33333 57899999999999999999999999986 45899999999999888899999999


Q ss_pred             HHHHHHHHHHHHHHhCC-CeEEEEEecCccccCcc
Q 044010          201 KAALVLFFETLRVELGS-DVGVTIVTPGFIESELT  234 (248)
Q Consensus       201 Kaal~~l~~~la~~~~~-~i~v~~v~pg~v~T~~~  234 (248)
                      |+|+++++++++.|+++ +||||+|+||+++|++.
T Consensus       203 Kaal~~l~~~la~el~~~gIrvn~i~PG~v~t~~~  237 (294)
T PRK07985        203 KAAILNYSRGLAKQVAEKGIRVNIVAPGPIWTALQ  237 (294)
T ss_pred             HHHHHHHHHHHHHHHhHhCcEEEEEECCcCccccc
Confidence            99999999999999987 59999999999999985

>PRK07097 gluconate 5-dehydrogenase; Provisional

Probab=100.00  E-value=2e-34  Score=244.18  Aligned_cols=193  Identities=27%  Similarity=0.440  Sum_probs=174.4

Q ss_pred             cCCCCCEEEEcCCCChHHHHHHHHHHHcCCeEEEEeCCcchHHHHHHHHHhhCCCcEEEEEccCCCHHHHHHHHHHHHhH
Q 044010           43 EDVSGKVVIITGASSGIGEHLAYEYARRGACLALCARREKSLEEVADTAREIGSPDVITIRADVSKVDDCRSLVEETMNH  122 (248)
Q Consensus        43 ~~~~~k~~lVtGg~~gIG~aia~~l~~~G~~V~l~~r~~~~~~~~~~~l~~~~~~~v~~~~~D~~~~~~~~~~~~~~~~~  122 (248)
                      .++++|+++||||++|||.+++++|+++|++|++.+|+.++.++..+.+++.+ .++.++.+|++|.++++++++++.+.
T Consensus         6 ~~~~~k~~lItGa~~~iG~~ia~~l~~~G~~vv~~~~~~~~~~~~~~~~~~~~-~~~~~~~~Dl~~~~~~~~~~~~~~~~   84 (265)
T PRK07097          6 FSLKGKIALITGASYGIGFAIAKAYAKAGATIVFNDINQELVDKGLAAYRELG-IEAHGYVCDVTDEDGVQAMVSQIEKE   84 (265)
T ss_pred             cCCCCCEEEEeCCCchHHHHHHHHHHHCCCeEEEEeCCHHHHHHHHHHHHhcC-CceEEEEcCCCCHHHHHHHHHHHHHh
Confidence            47899999999999999999999999999999999999888887777776554 37889999999999999999999999


Q ss_pred             cCCccEEEEccccCCcccccccCChHHHHHHHHhhhHHHHHHHHHHhhhhhhc-CCeEEEEcCccccccCCCCccchHHH
Q 044010          123 FGRLDHLVNNAGISSVALFEDIVNITDFKQIMNINFWGSVYTTRFAVPHLRYT-KGKIVVLSSAASWLTAPRMSFYNASK  201 (248)
Q Consensus       123 ~g~id~vv~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~-~g~iV~isS~~~~~~~~~~~~Y~~sK  201 (248)
                      ++++|++|||||.....+..+ .+.+++++.+++|+.+++.+.+.+.|.|.+. .|+||++||..+..+.++...|+++|
T Consensus        85 ~~~id~li~~ag~~~~~~~~~-~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~g~iv~isS~~~~~~~~~~~~Y~~sK  163 (265)
T PRK07097         85 VGVIDILVNNAGIIKRIPMLE-MSAEDFRQVIDIDLNAPFIVSKAVIPSMIKKGHGKIINICSMMSELGRETVSAYAAAK  163 (265)
T ss_pred             CCCCCEEEECCCCCCCCCccc-CCHHHHHHHHHhhhHHHHHHHHHHHHHHHhcCCcEEEEEcCccccCCCCCCccHHHHH
Confidence            999999999999877665554 5789999999999999999999999998754 48999999998888888899999999


Q ss_pred             HHHHHHHHHHHHHhCC-CeEEEEEecCccccCccccc
Q 044010          202 AALVLFFETLRVELGS-DVGVTIVTPGFIESELTQGK  237 (248)
Q Consensus       202 aal~~l~~~la~~~~~-~i~v~~v~pg~v~T~~~~~~  237 (248)
                      ++++++++++++++++ +|+||+|+||+++|++....
T Consensus       164 aal~~l~~~la~e~~~~gi~v~~v~Pg~v~t~~~~~~  200 (265)
T PRK07097        164 GGLKMLTKNIASEYGEANIQCNGIGPGYIATPQTAPL  200 (265)
T ss_pred             HHHHHHHHHHHHHhhhcCceEEEEEeccccccchhhh
Confidence            9999999999999987 59999999999999987543

>PLN02253 xanthoxin dehydrogenase

Probab=100.00  E-value=2e-34  Score=245.88  Aligned_cols=193  Identities=28%  Similarity=0.433  Sum_probs=168.4

Q ss_pred             ccCCCCCEEEEcCCCChHHHHHHHHHHHcCCeEEEEeCCcchHHHHHHHHHhhCCCcEEEEEccCCCHHHHHHHHHHHHh
Q 044010           42 SEDVSGKVVIITGASSGIGEHLAYEYARRGACLALCARREKSLEEVADTAREIGSPDVITIRADVSKVDDCRSLVEETMN  121 (248)
Q Consensus        42 ~~~~~~k~~lVtGg~~gIG~aia~~l~~~G~~V~l~~r~~~~~~~~~~~l~~~~~~~v~~~~~D~~~~~~~~~~~~~~~~  121 (248)
                      ..+++||+++||||++|||.+++++|+++|++|++++|+.+..++..+++..  +.++.++++|++|.++++++++++.+
T Consensus        13 ~~~l~~k~~lItGas~gIG~~la~~l~~~G~~v~~~~~~~~~~~~~~~~~~~--~~~~~~~~~Dl~d~~~~~~~~~~~~~   90 (280)
T PLN02253         13 SQRLLGKVALVTGGATGIGESIVRLFHKHGAKVCIVDLQDDLGQNVCDSLGG--EPNVCFFHCDVTVEDDVSRAVDFTVD   90 (280)
T ss_pred             ccccCCCEEEEECCCchHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHHhcC--CCceEEEEeecCCHHHHHHHHHHHHH
Confidence            3578899999999999999999999999999999999987766666555532  23688999999999999999999999


Q ss_pred             HcCCccEEEEccccCCcc-cccccCChHHHHHHHHhhhHHHHHHHHHHhhhhhh-cCCeEEEEcCccccccCCCCccchH
Q 044010          122 HFGRLDHLVNNAGISSVA-LFEDIVNITDFKQIMNINFWGSVYTTRFAVPHLRY-TKGKIVVLSSAASWLTAPRMSFYNA  199 (248)
Q Consensus       122 ~~g~id~vv~~ag~~~~~-~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~-~~g~iV~isS~~~~~~~~~~~~Y~~  199 (248)
                      ++|++|++|||||..... ....+.+.++|++.+++|+.+++++++++.+.|.+ .+|++|++||..+..+.++..+|++
T Consensus        91 ~~g~id~li~~Ag~~~~~~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~~~~~~~g~ii~isS~~~~~~~~~~~~Y~~  170 (280)
T PLN02253         91 KFGTLDIMVNNAGLTGPPCPDIRNVELSEFEKVFDVNVKGVFLGMKHAARIMIPLKKGSIVSLCSVASAIGGLGPHAYTG  170 (280)
T ss_pred             HhCCCCEEEECCCcCCCCCCCcccCCHHHHHHHHhHhhHHHHHHHHHHHHHHHhcCCceEEEecChhhcccCCCCcccHH
Confidence            999999999999976432 22233578999999999999999999999999864 4589999999999888888889999


Q ss_pred             HHHHHHHHHHHHHHHhCC-CeEEEEEecCccccCcccc
Q 044010          200 SKAALVLFFETLRVELGS-DVGVTIVTPGFIESELTQG  236 (248)
Q Consensus       200 sKaal~~l~~~la~~~~~-~i~v~~v~pg~v~T~~~~~  236 (248)
                      ||+++++++++++.|+++ +|+||+|+||+++|++...
T Consensus       171 sK~a~~~~~~~la~e~~~~gi~v~~i~pg~v~t~~~~~  208 (280)
T PLN02253        171 SKHAVLGLTRSVAAELGKHGIRVNCVSPYAVPTALALA  208 (280)
T ss_pred             HHHHHHHHHHHHHHHhhhcCeEEEEEeeCccccccccc
Confidence            999999999999999987 4999999999999998643

>PRK06125 short chain dehydrogenase; Provisional

Probab=100.00  E-value=1.7e-34  Score=243.71  Aligned_cols=189  Identities=31%  Similarity=0.370  Sum_probs=168.6

Q ss_pred             cCCCCCEEEEcCCCChHHHHHHHHHHHcCCeEEEEeCCcchHHHHHHHHHhhCCCcEEEEEccCCCHHHHHHHHHHHHhH
Q 044010           43 EDVSGKVVIITGASSGIGEHLAYEYARRGACLALCARREKSLEEVADTAREIGSPDVITIRADVSKVDDCRSLVEETMNH  122 (248)
Q Consensus        43 ~~~~~k~~lVtGg~~gIG~aia~~l~~~G~~V~l~~r~~~~~~~~~~~l~~~~~~~v~~~~~D~~~~~~~~~~~~~~~~~  122 (248)
                      +++++|+++||||++|||++++++|+++|++|++++|+.++.++..++++...+.++.++.+|++|.+++++++++    
T Consensus         3 ~~~~~k~vlItG~~~giG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~D~~~~~~~~~~~~~----   78 (259)
T PRK06125          3 LHLAGKRVLITGASKGIGAAAAEAFAAEGCHLHLVARDADALEALAADLRAAHGVDVAVHALDLSSPEAREQLAAE----   78 (259)
T ss_pred             cCCCCCEEEEeCCCchHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHHHHhhcCCceEEEEecCCCHHHHHHHHHH----
Confidence            5688999999999999999999999999999999999998888887777765555788999999999999888764    


Q ss_pred             cCCccEEEEccccCCcccccccCChHHHHHHHHhhhHHHHHHHHHHhhhhhhc-CCeEEEEcCccccccCCCCccchHHH
Q 044010          123 FGRLDHLVNNAGISSVALFEDIVNITDFKQIMNINFWGSVYTTRFAVPHLRYT-KGKIVVLSSAASWLTAPRMSFYNASK  201 (248)
Q Consensus       123 ~g~id~vv~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~-~g~iV~isS~~~~~~~~~~~~Y~~sK  201 (248)
                      ++++|++|||+|.....++.+ .+.++|++.+++|+.+++.+++++.|.|.++ .|+||++||..+..+.+.+..|+++|
T Consensus        79 ~g~id~lv~~ag~~~~~~~~~-~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~g~iv~iss~~~~~~~~~~~~y~ask  157 (259)
T PRK06125         79 AGDIDILVNNAGAIPGGGLDD-VDDAAWRAGWELKVFGYIDLTRLAYPRMKARGSGVIVNVIGAAGENPDADYICGSAGN  157 (259)
T ss_pred             hCCCCEEEECCCCCCCCCccc-CCHHHHHHHHHHhhHHHHHHHHHHHHHHHHcCCcEEEEecCccccCCCCCchHhHHHH
Confidence            579999999999876555555 5789999999999999999999999999765 48999999999988888888999999


Q ss_pred             HHHHHHHHHHHHHhCC-CeEEEEEecCccccCcccc
Q 044010          202 AALVLFFETLRVELGS-DVGVTIVTPGFIESELTQG  236 (248)
Q Consensus       202 aal~~l~~~la~~~~~-~i~v~~v~pg~v~T~~~~~  236 (248)
                      +|+++++++++.|+.+ +||||+|+||+++|++...
T Consensus       158 ~al~~~~~~la~e~~~~gi~v~~i~PG~v~t~~~~~  193 (259)
T PRK06125        158 AALMAFTRALGGKSLDDGVRVVGVNPGPVATDRMLT  193 (259)
T ss_pred             HHHHHHHHHHHHHhCccCeEEEEEecCccccHHHHH
Confidence            9999999999999987 4999999999999997543

>PRK05717 oxidoreductase; Validated

Probab=100.00  E-value=2.6e-34  Score=242.02  Aligned_cols=189  Identities=28%  Similarity=0.434  Sum_probs=166.9

Q ss_pred             cCCCCCEEEEcCCCChHHHHHHHHHHHcCCeEEEEeCCcchHHHHHHHHHhhCCCcEEEEEccCCCHHHHHHHHHHHHhH
Q 044010           43 EDVSGKVVIITGASSGIGEHLAYEYARRGACLALCARREKSLEEVADTAREIGSPDVITIRADVSKVDDCRSLVEETMNH  122 (248)
Q Consensus        43 ~~~~~k~~lVtGg~~gIG~aia~~l~~~G~~V~l~~r~~~~~~~~~~~l~~~~~~~v~~~~~D~~~~~~~~~~~~~~~~~  122 (248)
                      .+++||+++||||++|||.++|++|+++|++|++++|+.++.++..+++    +.++.++.+|+++.++++++++++.++
T Consensus         6 ~~~~~k~vlItG~sg~IG~~~a~~l~~~g~~v~~~~~~~~~~~~~~~~~----~~~~~~~~~Dl~~~~~~~~~~~~~~~~   81 (255)
T PRK05717          6 PGHNGRVALVTGAARGIGLGIAAWLIAEGWQVVLADLDRERGSKVAKAL----GENAWFIAMDVADEAQVAAGVAEVLGQ   81 (255)
T ss_pred             cccCCCEEEEeCCcchHHHHHHHHHHHcCCEEEEEcCCHHHHHHHHHHc----CCceEEEEccCCCHHHHHHHHHHHHHH
Confidence            4688999999999999999999999999999999999876555443332    236789999999999999999999999


Q ss_pred             cCCccEEEEccccCCcc-cccccCChHHHHHHHHhhhHHHHHHHHHHhhhhhhcCCeEEEEcCccccccCCCCccchHHH
Q 044010          123 FGRLDHLVNNAGISSVA-LFEDIVNITDFKQIMNINFWGSVYTTRFAVPHLRYTKGKIVVLSSAASWLTAPRMSFYNASK  201 (248)
Q Consensus       123 ~g~id~vv~~ag~~~~~-~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~g~iV~isS~~~~~~~~~~~~Y~~sK  201 (248)
                      +|++|++|||||...+. ......+.++|++.+++|+.+++.+++.+.|.|.+.+|+||++||..+..+.+...+|++||
T Consensus        82 ~g~id~li~~ag~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~g~ii~~sS~~~~~~~~~~~~Y~~sK  161 (255)
T PRK05717         82 FGRLDALVCNAAIADPHNTTLESLSLAHWNRVLAVNLTGPMLLAKHCAPYLRAHNGAIVNLASTRARQSEPDTEAYAASK  161 (255)
T ss_pred             hCCCCEEEECCCcccCCCCChhhCCHHHHHHHHHHhhHHHHHHHHHHHHHHHHcCcEEEEEcchhhcCCCCCCcchHHHH
Confidence            99999999999986532 22333577999999999999999999999999976678999999999998888899999999


Q ss_pred             HHHHHHHHHHHHHhCCCeEEEEEecCccccCccc
Q 044010          202 AALVLFFETLRVELGSDVGVTIVTPGFIESELTQ  235 (248)
Q Consensus       202 aal~~l~~~la~~~~~~i~v~~v~pg~v~T~~~~  235 (248)
                      +++++++++++.+++++++|++|+||+++|++..
T Consensus       162 aa~~~~~~~la~~~~~~i~v~~i~Pg~i~t~~~~  195 (255)
T PRK05717        162 GGLLALTHALAISLGPEIRVNAVSPGWIDARDPS  195 (255)
T ss_pred             HHHHHHHHHHHHHhcCCCEEEEEecccCcCCccc
Confidence            9999999999999987799999999999998754

>PRK05854 short chain dehydrogenase; Provisional

Probab=100.00  E-value=1.3e-34  Score=251.24  Aligned_cols=192  Identities=26%  Similarity=0.297  Sum_probs=167.3

Q ss_pred             cCCCCCEEEEcCCCChHHHHHHHHHHHcCCeEEEEeCCcchHHHHHHHHHhhC-CCcEEEEEccCCCHHHHHHHHHHHHh
Q 044010           43 EDVSGKVVIITGASSGIGEHLAYEYARRGACLALCARREKSLEEVADTAREIG-SPDVITIRADVSKVDDCRSLVEETMN  121 (248)
Q Consensus        43 ~~~~~k~~lVtGg~~gIG~aia~~l~~~G~~V~l~~r~~~~~~~~~~~l~~~~-~~~v~~~~~D~~~~~~~~~~~~~~~~  121 (248)
                      .+++||+++||||++|||+++|++|+++|++|++++|+.++.++..+++.+.. +.++.++.+|++|.++++++++++.+
T Consensus        10 ~~l~gk~~lITGas~GIG~~~a~~La~~G~~Vil~~R~~~~~~~~~~~l~~~~~~~~v~~~~~Dl~d~~sv~~~~~~~~~   89 (313)
T PRK05854         10 PDLSGKRAVVTGASDGLGLGLARRLAAAGAEVILPVRNRAKGEAAVAAIRTAVPDAKLSLRALDLSSLASVAALGEQLRA   89 (313)
T ss_pred             cccCCCEEEEeCCCChHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHHhCCCCceEEEEecCCCHHHHHHHHHHHHH
Confidence            47899999999999999999999999999999999999998888888886653 34688999999999999999999999


Q ss_pred             HcCCccEEEEccccCCcccccccCChHHHHHHHHhhhHHHHHHHHHHhhhhhhcCCeEEEEcCcccccc-----------
Q 044010          122 HFGRLDHLVNNAGISSVALFEDIVNITDFKQIMNINFWGSVYTTRFAVPHLRYTKGKIVVLSSAASWLT-----------  190 (248)
Q Consensus       122 ~~g~id~vv~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~g~iV~isS~~~~~~-----------  190 (248)
                      +++++|++|||||..... ..+ .+.++++..+.+|+.+++.+++.++|.|++..++||++||.++..+           
T Consensus        90 ~~~~iD~li~nAG~~~~~-~~~-~t~~~~e~~~~vN~~g~~~l~~~llp~l~~~~~riv~vsS~~~~~~~~~~~~~~~~~  167 (313)
T PRK05854         90 EGRPIHLLINNAGVMTPP-ERQ-TTADGFELQFGTNHLGHFALTAHLLPLLRAGRARVTSQSSIAARRGAINWDDLNWER  167 (313)
T ss_pred             hCCCccEEEECCccccCC-ccc-cCcccHHHHhhhhhHHHHHHHHHHHHHHHhCCCCeEEEechhhcCCCcCcccccccc
Confidence            999999999999986542 222 3568999999999999999999999999766789999999877543           


Q ss_pred             -CCCCccchHHHHHHHHHHHHHHHHh--CC-CeEEEEEecCccccCcccc
Q 044010          191 -APRMSFYNASKAALVLFFETLRVEL--GS-DVGVTIVTPGFIESELTQG  236 (248)
Q Consensus       191 -~~~~~~Y~~sKaal~~l~~~la~~~--~~-~i~v~~v~pg~v~T~~~~~  236 (248)
                       +++...|+.||+|++.+++.+++++  .. +|+||+++||+++|++...
T Consensus       168 ~~~~~~~Y~~SK~a~~~~~~~la~~~~~~~~gI~v~~v~PG~v~T~~~~~  217 (313)
T PRK05854        168 SYAGMRAYSQSKIAVGLFALELDRRSRAAGWGITSNLAHPGVAPTNLLAA  217 (313)
T ss_pred             cCcchhhhHHHHHHHHHHHHHHHHHhhcCCCCeEEEEEecceeccCcccc
Confidence             2456789999999999999999865  23 5999999999999998743

>PRK07523 gluconate 5-dehydrogenase; Provisional

Probab=100.00  E-value=2.4e-34  Score=242.15  Aligned_cols=192  Identities=26%  Similarity=0.423  Sum_probs=173.7

Q ss_pred             CCCCCEEEEcCCCChHHHHHHHHHHHcCCeEEEEeCCcchHHHHHHHHHhhCCCcEEEEEccCCCHHHHHHHHHHHHhHc
Q 044010           44 DVSGKVVIITGASSGIGEHLAYEYARRGACLALCARREKSLEEVADTAREIGSPDVITIRADVSKVDDCRSLVEETMNHF  123 (248)
Q Consensus        44 ~~~~k~~lVtGg~~gIG~aia~~l~~~G~~V~l~~r~~~~~~~~~~~l~~~~~~~v~~~~~D~~~~~~~~~~~~~~~~~~  123 (248)
                      +++||++|||||++|||.+++++|+++|++|++.+|++++.++..+.+++.+ .++..+.+|++|.++++++++++.+++
T Consensus         7 ~~~~k~vlItGa~g~iG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~i~~~~-~~~~~~~~D~~~~~~~~~~~~~~~~~~   85 (255)
T PRK07523          7 DLTGRRALVTGSSQGIGYALAEGLAQAGAEVILNGRDPAKLAAAAESLKGQG-LSAHALAFDVTDHDAVRAAIDAFEAEI   85 (255)
T ss_pred             CCCCCEEEEECCcchHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHHHHhcC-ceEEEEEccCCCHHHHHHHHHHHHHhc
Confidence            6889999999999999999999999999999999999888777777776654 368899999999999999999999999


Q ss_pred             CCccEEEEccccCCcccccccCChHHHHHHHHhhhHHHHHHHHHHhhhhhhc-CCeEEEEcCccccccCCCCccchHHHH
Q 044010          124 GRLDHLVNNAGISSVALFEDIVNITDFKQIMNINFWGSVYTTRFAVPHLRYT-KGKIVVLSSAASWLTAPRMSFYNASKA  202 (248)
Q Consensus       124 g~id~vv~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~-~g~iV~isS~~~~~~~~~~~~Y~~sKa  202 (248)
                      +++|++|||+|...+.+..+ .+.++|++.+++|+.+++.+++.+.+.|.++ .|+||++||..+..+.++...|+++|+
T Consensus        86 ~~~d~li~~ag~~~~~~~~~-~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~g~iv~iss~~~~~~~~~~~~y~~sK~  164 (255)
T PRK07523         86 GPIDILVNNAGMQFRTPLED-FPADAFERLLRTNISSVFYVGQAVARHMIARGAGKIINIASVQSALARPGIAPYTATKG  164 (255)
T ss_pred             CCCCEEEECCCCCCCCChhh-CCHHHHHHHHHHHhHHHHHHHHHHHHHHHHhCCeEEEEEccchhccCCCCCccHHHHHH
Confidence            99999999999876665554 4779999999999999999999999998754 589999999988888889999999999


Q ss_pred             HHHHHHHHHHHHhCC-CeEEEEEecCccccCccccc
Q 044010          203 ALVLFFETLRVELGS-DVGVTIVTPGFIESELTQGK  237 (248)
Q Consensus       203 al~~l~~~la~~~~~-~i~v~~v~pg~v~T~~~~~~  237 (248)
                      ++++++++++.++++ +|+||+|+||+++|++....
T Consensus       165 a~~~~~~~~a~e~~~~gi~v~~i~pg~~~t~~~~~~  200 (255)
T PRK07523        165 AVGNLTKGMATDWAKHGLQCNAIAPGYFDTPLNAAL  200 (255)
T ss_pred             HHHHHHHHHHHHhhHhCeEEEEEEECcccCchhhhh
Confidence            999999999999977 59999999999999987644

>PRK08936 glucose-1-dehydrogenase; Provisional

Probab=100.00  E-value=4.3e-34  Score=241.51  Aligned_cols=192  Identities=29%  Similarity=0.524  Sum_probs=170.1

Q ss_pred             cCCCCCEEEEcCCCChHHHHHHHHHHHcCCeEEEEeCCc-chHHHHHHHHHhhCCCcEEEEEccCCCHHHHHHHHHHHHh
Q 044010           43 EDVSGKVVIITGASSGIGEHLAYEYARRGACLALCARRE-KSLEEVADTAREIGSPDVITIRADVSKVDDCRSLVEETMN  121 (248)
Q Consensus        43 ~~~~~k~~lVtGg~~gIG~aia~~l~~~G~~V~l~~r~~-~~~~~~~~~l~~~~~~~v~~~~~D~~~~~~~~~~~~~~~~  121 (248)
                      .++++|+++||||++|||.++|++|+++|++|++.+|+. +..+...+++++.+ .++.++.+|++|.++++++++++.+
T Consensus         3 ~~~~~k~~lItGa~~gIG~~ia~~l~~~G~~vvi~~~~~~~~~~~~~~~l~~~~-~~~~~~~~Dl~~~~~i~~~~~~~~~   81 (261)
T PRK08936          3 SDLEGKVVVITGGSTGLGRAMAVRFGKEKAKVVINYRSDEEEANDVAEEIKKAG-GEAIAVKGDVTVESDVVNLIQTAVK   81 (261)
T ss_pred             cCCCCCEEEEeCCCChHHHHHHHHHHHCCCEEEEEeCCCHHHHHHHHHHHHHcC-CeEEEEEecCCCHHHHHHHHHHHHH
Confidence            468999999999999999999999999999999988854 44555666666544 4788999999999999999999999


Q ss_pred             HcCCccEEEEccccCCcccccccCChHHHHHHHHhhhHHHHHHHHHHhhhhhhc--CCeEEEEcCccccccCCCCccchH
Q 044010          122 HFGRLDHLVNNAGISSVALFEDIVNITDFKQIMNINFWGSVYTTRFAVPHLRYT--KGKIVVLSSAASWLTAPRMSFYNA  199 (248)
Q Consensus       122 ~~g~id~vv~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~--~g~iV~isS~~~~~~~~~~~~Y~~  199 (248)
                      .++++|++|||||...+.+..+ .+.++|++.+++|+.+++.+++.+++.|.+.  +|+||++||..+..+.++..+|++
T Consensus        82 ~~g~id~lv~~ag~~~~~~~~~-~~~~~~~~~~~~N~~~~~~~~~~~l~~~~~~~~~g~iv~~sS~~~~~~~~~~~~Y~~  160 (261)
T PRK08936         82 EFGTLDVMINNAGIENAVPSHE-MSLEDWNKVINTNLTGAFLGSREAIKYFVEHDIKGNIINMSSVHEQIPWPLFVHYAA  160 (261)
T ss_pred             HcCCCCEEEECCCCCCCCChhh-CCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcCCCcEEEEEccccccCCCCCCcccHH
Confidence            9999999999999876655544 4779999999999999999999999998754  489999999999888899999999


Q ss_pred             HHHHHHHHHHHHHHHhCC-CeEEEEEecCccccCcccc
Q 044010          200 SKAALVLFFETLRVELGS-DVGVTIVTPGFIESELTQG  236 (248)
Q Consensus       200 sKaal~~l~~~la~~~~~-~i~v~~v~pg~v~T~~~~~  236 (248)
                      +|+|+++++++++.++.+ +|+||+|+||+++|++...
T Consensus       161 sKaa~~~~~~~la~e~~~~gi~v~~v~pg~v~t~~~~~  198 (261)
T PRK08936        161 SKGGVKLMTETLAMEYAPKGIRVNNIGPGAINTPINAE  198 (261)
T ss_pred             HHHHHHHHHHHHHHHHhhcCeEEEEEEECcCCCCcccc
Confidence            999999999999999977 4999999999999998754

>PRK12859 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional

Probab=100.00  E-value=3e-34  Score=242.07  Aligned_cols=192  Identities=20%  Similarity=0.285  Sum_probs=166.0

Q ss_pred             cCCCCCEEEEcCCC--ChHHHHHHHHHHHcCCeEEEEeCC-----------cchHHHHHHHHHhhCCCcEEEEEccCCCH
Q 044010           43 EDVSGKVVIITGAS--SGIGEHLAYEYARRGACLALCARR-----------EKSLEEVADTAREIGSPDVITIRADVSKV  109 (248)
Q Consensus        43 ~~~~~k~~lVtGg~--~gIG~aia~~l~~~G~~V~l~~r~-----------~~~~~~~~~~l~~~~~~~v~~~~~D~~~~  109 (248)
                      .+++||+++||||+  +|||+++|++|+++|++|++.+|.           .++.++..+++++.+ .++.++.+|++|.
T Consensus         2 ~~l~~k~vlVtGas~~~giG~~~a~~l~~~G~~vi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g-~~~~~~~~D~~~~   80 (256)
T PRK12859          2 NQLKNKVAVVTGVSRLDGIGAAICKELAEAGADIFFTYWTAYDKEMPWGVDQDEQIQLQEELLKNG-VKVSSMELDLTQN   80 (256)
T ss_pred             CCcCCcEEEEECCCCCCChHHHHHHHHHHCCCeEEEEecccccccccccccHHHHHHHHHHHHhcC-CeEEEEEcCCCCH
Confidence            36899999999999  499999999999999999987642           122334445555444 4788999999999


Q ss_pred             HHHHHHHHHHHhHcCCccEEEEccccCCcccccccCChHHHHHHHHhhhHHHHHHHHHHhhhhhhc-CCeEEEEcCcccc
Q 044010          110 DDCRSLVEETMNHFGRLDHLVNNAGISSVALFEDIVNITDFKQIMNINFWGSVYTTRFAVPHLRYT-KGKIVVLSSAASW  188 (248)
Q Consensus       110 ~~~~~~~~~~~~~~g~id~vv~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~-~g~iV~isS~~~~  188 (248)
                      ++++++++++.+++|++|++|||||.....+..+ .+.++|++.+++|+.+++.+.+.+.|.|+++ .|+||++||..+.
T Consensus        81 ~~i~~~~~~~~~~~g~id~li~~ag~~~~~~~~~-~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~g~iv~isS~~~~  159 (256)
T PRK12859         81 DAPKELLNKVTEQLGYPHILVNNAAYSTNNDFSN-LTAEELDKHYMVNVRATTLLSSQFARGFDKKSGGRIINMTSGQFQ  159 (256)
T ss_pred             HHHHHHHHHHHHHcCCCcEEEECCCCCCCCChhh-CCHHHHHHHHHHHhHHHHHHHHHHHHHHhhcCCeEEEEEcccccC
Confidence            9999999999999999999999999876555554 5789999999999999999999999998754 5899999999999


Q ss_pred             ccCCCCccchHHHHHHHHHHHHHHHHhCC-CeEEEEEecCccccCcccc
Q 044010          189 LTAPRMSFYNASKAALVLFFETLRVELGS-DVGVTIVTPGFIESELTQG  236 (248)
Q Consensus       189 ~~~~~~~~Y~~sKaal~~l~~~la~~~~~-~i~v~~v~pg~v~T~~~~~  236 (248)
                      .+.+++..|++||+++++|+++++.++++ +|+||+|+||+++|++...
T Consensus       160 ~~~~~~~~Y~~sK~a~~~l~~~la~~~~~~~i~v~~v~PG~i~t~~~~~  208 (256)
T PRK12859        160 GPMVGELAYAATKGAIDALTSSLAAEVAHLGITVNAINPGPTDTGWMTE  208 (256)
T ss_pred             CCCCCchHHHHHHHHHHHHHHHHHHHhhhhCeEEEEEEEccccCCCCCH
Confidence            88899999999999999999999999987 4999999999999997543

>PRK07831 short chain dehydrogenase; Provisional

Probab=100.00  E-value=4.7e-34  Score=241.42  Aligned_cols=192  Identities=27%  Similarity=0.398  Sum_probs=171.9

Q ss_pred             CCCCCEEEEcCCCC-hHHHHHHHHHHHcCCeEEEEeCCcchHHHHHHHHHhh-CCCcEEEEEccCCCHHHHHHHHHHHHh
Q 044010           44 DVSGKVVIITGASS-GIGEHLAYEYARRGACLALCARREKSLEEVADTAREI-GSPDVITIRADVSKVDDCRSLVEETMN  121 (248)
Q Consensus        44 ~~~~k~~lVtGg~~-gIG~aia~~l~~~G~~V~l~~r~~~~~~~~~~~l~~~-~~~~v~~~~~D~~~~~~~~~~~~~~~~  121 (248)
                      .+++|+++||||+| |||.+++++|+++|++|++++|+.++.++..+++++. +..++.++.+|+++.++++++++++.+
T Consensus        14 ~~~~k~vlItG~sg~gIG~~ia~~l~~~G~~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~   93 (262)
T PRK07831         14 LLAGKVVLVTAAAGTGIGSATARRALEEGARVVISDIHERRLGETADELAAELGLGRVEAVVCDVTSEAQVDALIDAAVE   93 (262)
T ss_pred             ccCCCEEEEECCCcccHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHHHHHhcCCceEEEEEccCCCHHHHHHHHHHHHH
Confidence            46789999999985 9999999999999999999999988888887777663 334688899999999999999999999


Q ss_pred             HcCCccEEEEccccCCcccccccCChHHHHHHHHhhhHHHHHHHHHHhhhhhhc--CCeEEEEcCccccccCCCCccchH
Q 044010          122 HFGRLDHLVNNAGISSVALFEDIVNITDFKQIMNINFWGSVYTTRFAVPHLRYT--KGKIVVLSSAASWLTAPRMSFYNA  199 (248)
Q Consensus       122 ~~g~id~vv~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~--~g~iV~isS~~~~~~~~~~~~Y~~  199 (248)
                      ++|++|++|||||...+....+ .+.++|++.+++|+.+++.+++.+.|.|.+.  .|+||++||..+..+.++...|++
T Consensus        94 ~~g~id~li~~ag~~~~~~~~~-~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~g~iv~~ss~~~~~~~~~~~~Y~~  172 (262)
T PRK07831         94 RLGRLDVLVNNAGLGGQTPVVD-MTDDEWSRVLDVTLTGTFRATRAALRYMRARGHGGVIVNNASVLGWRAQHGQAHYAA  172 (262)
T ss_pred             HcCCCCEEEECCCCCCCCCccc-CCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcCCCcEEEEeCchhhcCCCCCCcchHH
Confidence            9999999999999866555554 5779999999999999999999999998754  589999999998888888999999


Q ss_pred             HHHHHHHHHHHHHHHhCCC-eEEEEEecCccccCcccc
Q 044010          200 SKAALVLFFETLRVELGSD-VGVTIVTPGFIESELTQG  236 (248)
Q Consensus       200 sKaal~~l~~~la~~~~~~-i~v~~v~pg~v~T~~~~~  236 (248)
                      +|+|+++++++++.|+++. ||||+|+||+++|++.+.
T Consensus       173 sKaal~~~~~~la~e~~~~gI~v~~i~Pg~~~t~~~~~  210 (262)
T PRK07831        173 AKAGVMALTRCSALEAAEYGVRINAVAPSIAMHPFLAK  210 (262)
T ss_pred             HHHHHHHHHHHHHHHhCccCeEEEEEeeCCccCccccc
Confidence            9999999999999999874 999999999999998754

>PRK09242 tropinone reductase; Provisional

Probab=100.00  E-value=3.9e-34  Score=241.14  Aligned_cols=195  Identities=30%  Similarity=0.401  Sum_probs=174.6

Q ss_pred             ccCCCCCEEEEcCCCChHHHHHHHHHHHcCCeEEEEeCCcchHHHHHHHHHhhC-CCcEEEEEccCCCHHHHHHHHHHHH
Q 044010           42 SEDVSGKVVIITGASSGIGEHLAYEYARRGACLALCARREKSLEEVADTAREIG-SPDVITIRADVSKVDDCRSLVEETM  120 (248)
Q Consensus        42 ~~~~~~k~~lVtGg~~gIG~aia~~l~~~G~~V~l~~r~~~~~~~~~~~l~~~~-~~~v~~~~~D~~~~~~~~~~~~~~~  120 (248)
                      ..++++|+++||||++|||.+++++|+++|++|++++|+.++.++..+++.... +.++.++.+|++++++++++++++.
T Consensus         4 ~~~~~~k~~lItGa~~gIG~~~a~~l~~~G~~v~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~   83 (257)
T PRK09242          4 RWRLDGQTALITGASKGIGLAIAREFLGLGADVLIVARDADALAQARDELAEEFPEREVHGLAADVSDDEDRRAILDWVE   83 (257)
T ss_pred             ccccCCCEEEEeCCCchHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHHHHhhCCCCeEEEEECCCCCHHHHHHHHHHHH
Confidence            346889999999999999999999999999999999999888888777776552 3478899999999999999999999


Q ss_pred             hHcCCccEEEEccccCCcccccccCChHHHHHHHHhhhHHHHHHHHHHhhhhhhc-CCeEEEEcCccccccCCCCccchH
Q 044010          121 NHFGRLDHLVNNAGISSVALFEDIVNITDFKQIMNINFWGSVYTTRFAVPHLRYT-KGKIVVLSSAASWLTAPRMSFYNA  199 (248)
Q Consensus       121 ~~~g~id~vv~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~-~g~iV~isS~~~~~~~~~~~~Y~~  199 (248)
                      ++++++|++|||+|.....+..+ .+.++|++.+++|+.+++.+++++.|.|+++ .++||++||..+..+.++...|++
T Consensus        84 ~~~g~id~li~~ag~~~~~~~~~-~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~ii~~sS~~~~~~~~~~~~Y~~  162 (257)
T PRK09242         84 DHWDGLHILVNNAGGNIRKAAID-YTEDEWRGIFETNLFSAFELSRYAHPLLKQHASSAIVNIGSVSGLTHVRSGAPYGM  162 (257)
T ss_pred             HHcCCCCEEEECCCCCCCCChhh-CCHHHHHHHHhhhhHHHHHHHHHHHHHHHhcCCceEEEECccccCCCCCCCcchHH
Confidence            99999999999999865444444 4779999999999999999999999999754 489999999999999889999999


Q ss_pred             HHHHHHHHHHHHHHHhCC-CeEEEEEecCccccCccccc
Q 044010          200 SKAALVLFFETLRVELGS-DVGVTIVTPGFIESELTQGK  237 (248)
Q Consensus       200 sKaal~~l~~~la~~~~~-~i~v~~v~pg~v~T~~~~~~  237 (248)
                      +|+++++++++++.++.+ +|+||+|+||+++|++....
T Consensus       163 sK~a~~~~~~~la~e~~~~~i~v~~i~Pg~i~t~~~~~~  201 (257)
T PRK09242        163 TKAALLQMTRNLAVEWAEDGIRVNAVAPWYIRTPLTSGP  201 (257)
T ss_pred             HHHHHHHHHHHHHHHHHHhCeEEEEEEECCCCCcccccc
Confidence            999999999999999976 59999999999999997654

>TIGR01832 kduD 2-deoxy-D-gluconate 3-dehydrogenase

Probab=100.00  E-value=4.3e-34  Score=239.44  Aligned_cols=190  Identities=30%  Similarity=0.492  Sum_probs=166.9

Q ss_pred             CCCCCEEEEcCCCChHHHHHHHHHHHcCCeEEEEeCCcchHHHHHHHHHhhCCCcEEEEEccCCCHHHHHHHHHHHHhHc
Q 044010           44 DVSGKVVIITGASSGIGEHLAYEYARRGACLALCARREKSLEEVADTAREIGSPDVITIRADVSKVDDCRSLVEETMNHF  123 (248)
Q Consensus        44 ~~~~k~~lVtGg~~gIG~aia~~l~~~G~~V~l~~r~~~~~~~~~~~l~~~~~~~v~~~~~D~~~~~~~~~~~~~~~~~~  123 (248)
                      +++||+++||||++|||.+++++|+++|++|++++|+.  .++..+.+++.+ .++.++.+|+++.++++++++++.+.+
T Consensus         2 ~~~~k~vlItGas~gIG~~ia~~l~~~G~~vi~~~r~~--~~~~~~~~~~~~-~~~~~~~~D~~~~~~~~~~~~~~~~~~   78 (248)
T TIGR01832         2 SLEGKVALVTGANTGLGQGIAVGLAEAGADIVGAGRSE--PSETQQQVEALG-RRFLSLTADLSDIEAIKALVDSAVEEF   78 (248)
T ss_pred             CCCCCEEEEECCCchHHHHHHHHHHHCCCEEEEEcCch--HHHHHHHHHhcC-CceEEEECCCCCHHHHHHHHHHHHHHc
Confidence            57899999999999999999999999999999999975  234445554444 368899999999999999999999999


Q ss_pred             CCccEEEEccccCCcccccccCChHHHHHHHHhhhHHHHHHHHHHhhhhhhc--CCeEEEEcCccccccCCCCccchHHH
Q 044010          124 GRLDHLVNNAGISSVALFEDIVNITDFKQIMNINFWGSVYTTRFAVPHLRYT--KGKIVVLSSAASWLTAPRMSFYNASK  201 (248)
Q Consensus       124 g~id~vv~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~--~g~iV~isS~~~~~~~~~~~~Y~~sK  201 (248)
                      +++|++|||||...+.+..+ .+.++|++.+++|+.+++.+++++.+.|.++  .|++|++||..+..+.+....|++||
T Consensus        79 ~~~d~li~~ag~~~~~~~~~-~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~g~iv~~sS~~~~~~~~~~~~Y~~sK  157 (248)
T TIGR01832        79 GHIDILVNNAGIIRRADAEE-FSEKDWDDVMNVNLKSVFFLTQAAAKHFLKQGRGGKIINIASMLSFQGGIRVPSYTASK  157 (248)
T ss_pred             CCCCEEEECCCCCCCCChhh-CCHHHHHHHHhhhhHHHHHHHHHHHHHHHhcCCCeEEEEEecHHhccCCCCCchhHHHH
Confidence            99999999999876655444 4678999999999999999999999998644  48999999999888888889999999


Q ss_pred             HHHHHHHHHHHHHhCC-CeEEEEEecCccccCccccc
Q 044010          202 AALVLFFETLRVELGS-DVGVTIVTPGFIESELTQGK  237 (248)
Q Consensus       202 aal~~l~~~la~~~~~-~i~v~~v~pg~v~T~~~~~~  237 (248)
                      ++++++++++++++++ +|+||+|+||+++|++.+..
T Consensus       158 aa~~~~~~~la~e~~~~gi~v~~v~pg~v~t~~~~~~  194 (248)
T TIGR01832       158 HGVAGLTKLLANEWAAKGINVNAIAPGYMATNNTQAL  194 (248)
T ss_pred             HHHHHHHHHHHHHhCccCcEEEEEEECcCcCcchhcc
Confidence            9999999999999987 49999999999999987643

This model describes 2-deoxy-D-gluconate 3-dehydrogenase (also called 2-keto-3-deoxygluconate oxidoreductase), a member of the family of short-chain-alcohol dehydrogenases (pfam00106). This protein has been characterized in Erwinia chrysanthemi as an enzyme of pectin degradation.

>PRK08643 acetoin reductase; Validated

Probab=100.00  E-value=5.5e-34  Score=239.99  Aligned_cols=188  Identities=28%  Similarity=0.447  Sum_probs=169.9

Q ss_pred             CCEEEEcCCCChHHHHHHHHHHHcCCeEEEEeCCcchHHHHHHHHHhhCCCcEEEEEccCCCHHHHHHHHHHHHhHcCCc
Q 044010           47 GKVVIITGASSGIGEHLAYEYARRGACLALCARREKSLEEVADTAREIGSPDVITIRADVSKVDDCRSLVEETMNHFGRL  126 (248)
Q Consensus        47 ~k~~lVtGg~~gIG~aia~~l~~~G~~V~l~~r~~~~~~~~~~~l~~~~~~~v~~~~~D~~~~~~~~~~~~~~~~~~g~i  126 (248)
                      +|+++||||++|||.+++++|+++|++|++++|+.++.++..+++.+.+ .++.++.+|+++.++++++++++.++++++
T Consensus         2 ~k~~lItGas~giG~~la~~l~~~G~~v~~~~r~~~~~~~~~~~~~~~~-~~~~~~~~Dl~~~~~~~~~~~~~~~~~~~i   80 (256)
T PRK08643          2 SKVALVTGAGQGIGFAIAKRLVEDGFKVAIVDYNEETAQAAADKLSKDG-GKAIAVKADVSDRDQVFAAVRQVVDTFGDL   80 (256)
T ss_pred             CCEEEEECCCChHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcC-CeEEEEECCCCCHHHHHHHHHHHHHHcCCC
Confidence            7899999999999999999999999999999999888887777776554 378889999999999999999999999999


Q ss_pred             cEEEEccccCCcccccccCChHHHHHHHHhhhHHHHHHHHHHhhhhhhc--CCeEEEEcCccccccCCCCccchHHHHHH
Q 044010          127 DHLVNNAGISSVALFEDIVNITDFKQIMNINFWGSVYTTRFAVPHLRYT--KGKIVVLSSAASWLTAPRMSFYNASKAAL  204 (248)
Q Consensus       127 d~vv~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~--~g~iV~isS~~~~~~~~~~~~Y~~sKaal  204 (248)
                      |++|||||.....+..+ .+.+++++.+++|+.+++.+++.+.+.|++.  +++||++||..+..+.++...|+++|+++
T Consensus        81 d~vi~~ag~~~~~~~~~-~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~~~iv~~sS~~~~~~~~~~~~Y~~sK~a~  159 (256)
T PRK08643         81 NVVVNNAGVAPTTPIET-ITEEQFDKVYNINVGGVIWGIQAAQEAFKKLGHGGKIINATSQAGVVGNPELAVYSSTKFAV  159 (256)
T ss_pred             CEEEECCCCCCCCCccc-CCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcCCCCEEEEECccccccCCCCCchhHHHHHHH
Confidence            99999999876555544 5779999999999999999999999998654  37999999999988888899999999999


Q ss_pred             HHHHHHHHHHhCCC-eEEEEEecCccccCcccc
Q 044010          205 VLFFETLRVELGSD-VGVTIVTPGFIESELTQG  236 (248)
Q Consensus       205 ~~l~~~la~~~~~~-i~v~~v~pg~v~T~~~~~  236 (248)
                      +.+++.++.|+.+. |+||+|+||+++|++...
T Consensus       160 ~~~~~~la~e~~~~gi~v~~i~Pg~v~t~~~~~  192 (256)
T PRK08643        160 RGLTQTAARDLASEGITVNAYAPGIVKTPMMFD  192 (256)
T ss_pred             HHHHHHHHHHhcccCcEEEEEeeCCCcChhhhH
Confidence            99999999999874 999999999999998764

>PRK06113 7-alpha-hydroxysteroid dehydrogenase; Validated

Probab=100.00  E-value=6.2e-34  Score=239.74  Aligned_cols=192  Identities=26%  Similarity=0.462  Sum_probs=172.0

Q ss_pred             cCCCCCEEEEcCCCChHHHHHHHHHHHcCCeEEEEeCCcchHHHHHHHHHhhCCCcEEEEEccCCCHHHHHHHHHHHHhH
Q 044010           43 EDVSGKVVIITGASSGIGEHLAYEYARRGACLALCARREKSLEEVADTAREIGSPDVITIRADVSKVDDCRSLVEETMNH  122 (248)
Q Consensus        43 ~~~~~k~~lVtGg~~gIG~aia~~l~~~G~~V~l~~r~~~~~~~~~~~l~~~~~~~v~~~~~D~~~~~~~~~~~~~~~~~  122 (248)
                      .++++|+++||||++|||.+++++|+++|++|++++|+.+..+...++++..+. ++.++.+|+++.++++++++++.+.
T Consensus         7 ~~l~~k~vlVtG~s~gIG~~la~~l~~~G~~vv~~~r~~~~~~~~~~~l~~~~~-~~~~~~~D~~~~~~i~~~~~~~~~~   85 (255)
T PRK06113          7 LRLDGKCAIITGAGAGIGKEIAITFATAGASVVVSDINADAANHVVDEIQQLGG-QAFACRCDITSEQELSALADFALSK   85 (255)
T ss_pred             cCcCCCEEEEECCCchHHHHHHHHHHHCCCeEEEEeCCHHHHHHHHHHHHhcCC-cEEEEEccCCCHHHHHHHHHHHHHH
Confidence            467899999999999999999999999999999999998887777777765443 7888999999999999999999999


Q ss_pred             cCCccEEEEccccCCcccccccCChHHHHHHHHhhhHHHHHHHHHHhhhhhhc-CCeEEEEcCccccccCCCCccchHHH
Q 044010          123 FGRLDHLVNNAGISSVALFEDIVNITDFKQIMNINFWGSVYTTRFAVPHLRYT-KGKIVVLSSAASWLTAPRMSFYNASK  201 (248)
Q Consensus       123 ~g~id~vv~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~-~g~iV~isS~~~~~~~~~~~~Y~~sK  201 (248)
                      ++++|++|||||...+.+. + .+.++|++.+++|+.+++.+++++.|.|.+. +|+||++||..+..+.++...|++||
T Consensus        86 ~~~~d~li~~ag~~~~~~~-~-~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~iv~isS~~~~~~~~~~~~Y~~sK  163 (255)
T PRK06113         86 LGKVDILVNNAGGGGPKPF-D-MPMADFRRAYELNVFSFFHLSQLVAPEMEKNGGGVILTITSMAAENKNINMTSYASSK  163 (255)
T ss_pred             cCCCCEEEECCCCCCCCCC-C-CCHHHHHHHHHHhhhhHHHHHHHHHHHHHhcCCcEEEEEecccccCCCCCcchhHHHH
Confidence            9999999999998665444 3 4679999999999999999999999998644 47999999999998888899999999


Q ss_pred             HHHHHHHHHHHHHhCCC-eEEEEEecCccccCccccc
Q 044010          202 AALVLFFETLRVELGSD-VGVTIVTPGFIESELTQGK  237 (248)
Q Consensus       202 aal~~l~~~la~~~~~~-i~v~~v~pg~v~T~~~~~~  237 (248)
                      +|+++++++++.++.+. ||||+|+||+++|++....
T Consensus       164 ~a~~~~~~~la~~~~~~~i~v~~v~pg~~~t~~~~~~  200 (255)
T PRK06113        164 AAASHLVRNMAFDLGEKNIRVNGIAPGAILTDALKSV  200 (255)
T ss_pred             HHHHHHHHHHHHHhhhhCeEEEEEecccccccccccc
Confidence            99999999999999874 9999999999999987654

>PRK08340 glucose-1-dehydrogenase; Provisional

Probab=100.00  E-value=3.9e-34  Score=241.61  Aligned_cols=185  Identities=26%  Similarity=0.399  Sum_probs=164.9

Q ss_pred             EEEEcCCCChHHHHHHHHHHHcCCeEEEEeCCcchHHHHHHHHHhhCCCcEEEEEccCCCHHHHHHHHHHHHhHcCCccE
Q 044010           49 VVIITGASSGIGEHLAYEYARRGACLALCARREKSLEEVADTAREIGSPDVITIRADVSKVDDCRSLVEETMNHFGRLDH  128 (248)
Q Consensus        49 ~~lVtGg~~gIG~aia~~l~~~G~~V~l~~r~~~~~~~~~~~l~~~~~~~v~~~~~D~~~~~~~~~~~~~~~~~~g~id~  128 (248)
                      +++||||++|||+++|++|+++|++|++++|++++.++..+++++.+  ++.++.+|++|.++++++++++.+++|++|+
T Consensus         2 ~vlItGas~gIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~l~~~~--~~~~~~~Dv~d~~~~~~~~~~~~~~~g~id~   79 (259)
T PRK08340          2 NVLVTASSRGIGFNVARELLKKGARVVISSRNEENLEKALKELKEYG--EVYAVKADLSDKDDLKNLVKEAWELLGGIDA   79 (259)
T ss_pred             eEEEEcCCcHHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHHHHhcC--CceEEEcCCCCHHHHHHHHHHHHHhcCCCCE
Confidence            69999999999999999999999999999999988888877776543  5788999999999999999999999999999


Q ss_pred             EEEccccCCc--ccccccCChHHHHHHHHhhhHHHHHHHHHHhhhhhh--cCCeEEEEcCccccccCCCCccchHHHHHH
Q 044010          129 LVNNAGISSV--ALFEDIVNITDFKQIMNINFWGSVYTTRFAVPHLRY--TKGKIVVLSSAASWLTAPRMSFYNASKAAL  204 (248)
Q Consensus       129 vv~~ag~~~~--~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~--~~g~iV~isS~~~~~~~~~~~~Y~~sKaal  204 (248)
                      +|||||....  .+..+ .+.++|.+.+++|+.+++.+.+.++|.|.+  .+|+||++||..+..+.++...|++||+|+
T Consensus        80 li~naG~~~~~~~~~~~-~~~~~~~~~~~~n~~~~~~~~~~~l~~~~~~~~~g~iv~isS~~~~~~~~~~~~y~~sKaa~  158 (259)
T PRK08340         80 LVWNAGNVRCEPCMLHE-AGYSDWLEAALLHLVAPGYLTTLLIQAWLEKKMKGVLVYLSSVSVKEPMPPLVLADVTRAGL  158 (259)
T ss_pred             EEECCCCCCCCcccccc-ccHHHHHHHHhhcchHHHHHHHHHHHHHHhcCCCCEEEEEeCcccCCCCCCchHHHHHHHHH
Confidence            9999997532  22333 467899999999999999999999998752  358999999999988888899999999999


Q ss_pred             HHHHHHHHHHhCCC-eEEEEEecCccccCcccc
Q 044010          205 VLFFETLRVELGSD-VGVTIVTPGFIESELTQG  236 (248)
Q Consensus       205 ~~l~~~la~~~~~~-i~v~~v~pg~v~T~~~~~  236 (248)
                      ++++++++.++++. ||||+|+||+++|++.+.
T Consensus       159 ~~~~~~la~e~~~~gI~v~~v~pG~v~t~~~~~  191 (259)
T PRK08340        159 VQLAKGVSRTYGGKGIRAYTVLLGSFDTPGARE  191 (259)
T ss_pred             HHHHHHHHHHhCCCCEEEEEeccCcccCccHHH
Confidence            99999999999875 999999999999998753

>PRK06463 fabG 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional

Probab=100.00  E-value=4e-34  Score=240.88  Aligned_cols=188  Identities=35%  Similarity=0.566  Sum_probs=161.6

Q ss_pred             ccCCCCCEEEEcCCCChHHHHHHHHHHHcCCeEEEEeCCcchHHHHHHHHHhhCCCcEEEEEccCCCHHHHHHHHHHHHh
Q 044010           42 SEDVSGKVVIITGASSGIGEHLAYEYARRGACLALCARREKSLEEVADTAREIGSPDVITIRADVSKVDDCRSLVEETMN  121 (248)
Q Consensus        42 ~~~~~~k~~lVtGg~~gIG~aia~~l~~~G~~V~l~~r~~~~~~~~~~~l~~~~~~~v~~~~~D~~~~~~~~~~~~~~~~  121 (248)
                      .+++++|+++||||++|||.++|++|+++|++|++.+++.++   ..+++++.   ++.++.+|++|+++++++++++.+
T Consensus         2 ~~~l~~k~~lItGas~gIG~~~a~~l~~~G~~v~~~~~~~~~---~~~~l~~~---~~~~~~~Dl~~~~~~~~~~~~~~~   75 (255)
T PRK06463          2 SMRFKGKVALITGGTRGIGRAIAEAFLREGAKVAVLYNSAEN---EAKELREK---GVFTIKCDVGNRDQVKKSKEVVEK   75 (255)
T ss_pred             CCCcCCCEEEEeCCCChHHHHHHHHHHHCCCEEEEEeCCcHH---HHHHHHhC---CCeEEEecCCCHHHHHHHHHHHHH
Confidence            357889999999999999999999999999999988775532   22333322   467899999999999999999999


Q ss_pred             HcCCccEEEEccccCCcccccccCChHHHHHHHHhhhHHHHHHHHHHhhhhhh-cCCeEEEEcCccccc-cCCCCccchH
Q 044010          122 HFGRLDHLVNNAGISSVALFEDIVNITDFKQIMNINFWGSVYTTRFAVPHLRY-TKGKIVVLSSAASWL-TAPRMSFYNA  199 (248)
Q Consensus       122 ~~g~id~vv~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~-~~g~iV~isS~~~~~-~~~~~~~Y~~  199 (248)
                      .++++|++|||||.....+..+ .+.++|++.+++|+.+++.+++.++|.|++ .+|+||++||..+.. +.++...|++
T Consensus        76 ~~~~id~li~~ag~~~~~~~~~-~~~~~~~~~~~~n~~~~~~~~~~~l~~~~~~~~g~iv~isS~~~~~~~~~~~~~Y~a  154 (255)
T PRK06463         76 EFGRVDVLVNNAGIMYLMPFEE-FDEEKYNKMIKINLNGAIYTTYEFLPLLKLSKNGAIVNIASNAGIGTAAEGTTFYAI  154 (255)
T ss_pred             HcCCCCEEEECCCcCCCCChhh-CCHHHHHHHHhHhhHHHHHHHHHHHHHHHhcCCcEEEEEcCHHhCCCCCCCccHhHH
Confidence            9999999999999875554444 477999999999999999999999999874 458999999988874 4467788999


Q ss_pred             HHHHHHHHHHHHHHHhCC-CeEEEEEecCccccCcccc
Q 044010          200 SKAALVLFFETLRVELGS-DVGVTIVTPGFIESELTQG  236 (248)
Q Consensus       200 sKaal~~l~~~la~~~~~-~i~v~~v~pg~v~T~~~~~  236 (248)
                      ||+|+++++++++.|+++ +|+||+|+||+++|++...
T Consensus       155 sKaa~~~~~~~la~e~~~~~i~v~~i~Pg~v~t~~~~~  192 (255)
T PRK06463        155 TKAGIIILTRRLAFELGKYGIRVNAVAPGWVETDMTLS  192 (255)
T ss_pred             HHHHHHHHHHHHHHHhhhcCeEEEEEeeCCCCCchhhc
Confidence            999999999999999987 4999999999999998753

>PRK12823 benD 1,6-dihydroxycyclohexa-2,4-diene-1-carboxylate dehydrogenase; Provisional

Probab=100.00  E-value=7.4e-34  Score=239.70  Aligned_cols=188  Identities=28%  Similarity=0.434  Sum_probs=161.4

Q ss_pred             ccCCCCCEEEEcCCCChHHHHHHHHHHHcCCeEEEEeCCcchHHHHHHHHHhhCCCcEEEEEccCCCHHHHHHHHHHHHh
Q 044010           42 SEDVSGKVVIITGASSGIGEHLAYEYARRGACLALCARREKSLEEVADTAREIGSPDVITIRADVSKVDDCRSLVEETMN  121 (248)
Q Consensus        42 ~~~~~~k~~lVtGg~~gIG~aia~~l~~~G~~V~l~~r~~~~~~~~~~~l~~~~~~~v~~~~~D~~~~~~~~~~~~~~~~  121 (248)
                      ..++++|+++||||++|||.+++++|+++|++|++++|+. ..++..+++...+ .++.++.+|+++.++++++++++.+
T Consensus         3 ~~~~~~k~vlVtGas~gIG~~la~~l~~~G~~v~~~~r~~-~~~~~~~~~~~~~-~~~~~~~~D~~~~~~~~~~~~~~~~   80 (260)
T PRK12823          3 NQRFAGKVVVVTGAAQGIGRGVALRAAAEGARVVLVDRSE-LVHEVAAELRAAG-GEALALTADLETYAGAQAAMAAAVE   80 (260)
T ss_pred             ccccCCCEEEEeCCCchHHHHHHHHHHHCCCEEEEEeCch-HHHHHHHHHHhcC-CeEEEEEEeCCCHHHHHHHHHHHHH
Confidence            4568899999999999999999999999999999999985 3445555555444 3688899999999999999999999


Q ss_pred             HcCCccEEEEccccCC-cccccccCChHHHHHHHHhhhHHHHHHHHHHhhhhhhcC-CeEEEEcCccccccCCCCccchH
Q 044010          122 HFGRLDHLVNNAGISS-VALFEDIVNITDFKQIMNINFWGSVYTTRFAVPHLRYTK-GKIVVLSSAASWLTAPRMSFYNA  199 (248)
Q Consensus       122 ~~g~id~vv~~ag~~~-~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~-g~iV~isS~~~~~~~~~~~~Y~~  199 (248)
                      +++++|++|||||... ..+..+ .+.++|++.+++|+.+++.+++.++|.|.+.+ |+||++||..+..  +...+|++
T Consensus        81 ~~~~id~lv~nAg~~~~~~~~~~-~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~g~iv~~sS~~~~~--~~~~~Y~~  157 (260)
T PRK12823         81 AFGRIDVLINNVGGTIWAKPFEE-YEEEQIEAEIRRSLFPTLWCCRAVLPHMLAQGGGAIVNVSSIATRG--INRVPYSA  157 (260)
T ss_pred             HcCCCeEEEECCccccCCCChhh-CChHHHHHHHHHHhHHHHHHHHHHHHHHHhcCCCeEEEEcCccccC--CCCCccHH
Confidence            9999999999999653 333333 57799999999999999999999999997554 8999999987642  34578999


Q ss_pred             HHHHHHHHHHHHHHHhCC-CeEEEEEecCccccCcc
Q 044010          200 SKAALVLFFETLRVELGS-DVGVTIVTPGFIESELT  234 (248)
Q Consensus       200 sKaal~~l~~~la~~~~~-~i~v~~v~pg~v~T~~~  234 (248)
                      ||+|+++++++++.++++ +|+||+|+||+++|++.
T Consensus       158 sK~a~~~~~~~la~e~~~~gi~v~~v~Pg~v~t~~~  193 (260)
T PRK12823        158 AKGGVNALTASLAFEYAEHGIRVNAVAPGGTEAPPR  193 (260)
T ss_pred             HHHHHHHHHHHHHHHhcccCcEEEEEecCccCCcch
Confidence            999999999999999987 49999999999999863

>PRK05866 short chain dehydrogenase; Provisional

Probab=100.00  E-value=7.5e-34  Score=244.36  Aligned_cols=194  Identities=32%  Similarity=0.469  Sum_probs=170.8

Q ss_pred             ccCCCCCEEEEcCCCChHHHHHHHHHHHcCCeEEEEeCCcchHHHHHHHHHhhCCCcEEEEEccCCCHHHHHHHHHHHHh
Q 044010           42 SEDVSGKVVIITGASSGIGEHLAYEYARRGACLALCARREKSLEEVADTAREIGSPDVITIRADVSKVDDCRSLVEETMN  121 (248)
Q Consensus        42 ~~~~~~k~~lVtGg~~gIG~aia~~l~~~G~~V~l~~r~~~~~~~~~~~l~~~~~~~v~~~~~D~~~~~~~~~~~~~~~~  121 (248)
                      .+++++|+++||||++|||+++|++|+++|++|++++|+.+++++..+++.+.+. ++.++.+|++|.++++++++++.+
T Consensus        35 ~~~~~~k~vlItGasggIG~~la~~La~~G~~Vi~~~R~~~~l~~~~~~l~~~~~-~~~~~~~Dl~d~~~v~~~~~~~~~  113 (293)
T PRK05866         35 PVDLTGKRILLTGASSGIGEAAAEQFARRGATVVAVARREDLLDAVADRITRAGG-DAMAVPCDLSDLDAVDALVADVEK  113 (293)
T ss_pred             CcCCCCCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHhcCC-cEEEEEccCCCHHHHHHHHHHHHH
Confidence            4578899999999999999999999999999999999999888888777765543 688999999999999999999999


Q ss_pred             HcCCccEEEEccccCCccccccc-CChHHHHHHHHhhhHHHHHHHHHHhhhhhhc-CCeEEEEcCccccc-cCCCCccch
Q 044010          122 HFGRLDHLVNNAGISSVALFEDI-VNITDFKQIMNINFWGSVYTTRFAVPHLRYT-KGKIVVLSSAASWL-TAPRMSFYN  198 (248)
Q Consensus       122 ~~g~id~vv~~ag~~~~~~~~~~-~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~-~g~iV~isS~~~~~-~~~~~~~Y~  198 (248)
                      .+|++|++|||||.....+..+. .+.++++..+++|+.+++.+++.+.|.|.+. .|+||++||.++.. +.++...|+
T Consensus       114 ~~g~id~li~~AG~~~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~~~~~~~g~iv~isS~~~~~~~~p~~~~Y~  193 (293)
T PRK05866        114 RIGGVDILINNAGRSIRRPLAESLDRWHDVERTMVLNYYAPLRLIRGLAPGMLERGDGHIINVATWGVLSEASPLFSVYN  193 (293)
T ss_pred             HcCCCCEEEECCCCCCCcchhhccccHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCcEEEEECChhhcCCCCCCcchHH
Confidence            99999999999998766554432 2457889999999999999999999998754 48999999977654 367788999


Q ss_pred             HHHHHHHHHHHHHHHHhCC-CeEEEEEecCccccCcccc
Q 044010          199 ASKAALVLFFETLRVELGS-DVGVTIVTPGFIESELTQG  236 (248)
Q Consensus       199 ~sKaal~~l~~~la~~~~~-~i~v~~v~pg~v~T~~~~~  236 (248)
                      +||+|+++++++++.|+++ +|+|++|+||.++|++.+.
T Consensus       194 asKaal~~l~~~la~e~~~~gI~v~~v~pg~v~T~~~~~  232 (293)
T PRK05866        194 ASKAALSAVSRVIETEWGDRGVHSTTLYYPLVATPMIAP  232 (293)
T ss_pred             HHHHHHHHHHHHHHHHhcccCcEEEEEEcCcccCccccc
Confidence            9999999999999999987 4999999999999999864

>PRK07109 short chain dehydrogenase; Provisional

Probab=100.00  E-value=6.1e-34  Score=249.12  Aligned_cols=191  Identities=34%  Similarity=0.525  Sum_probs=174.2

Q ss_pred             cCCCCCEEEEcCCCChHHHHHHHHHHHcCCeEEEEeCCcchHHHHHHHHHhhCCCcEEEEEccCCCHHHHHHHHHHHHhH
Q 044010           43 EDVSGKVVIITGASSGIGEHLAYEYARRGACLALCARREKSLEEVADTAREIGSPDVITIRADVSKVDDCRSLVEETMNH  122 (248)
Q Consensus        43 ~~~~~k~~lVtGg~~gIG~aia~~l~~~G~~V~l~~r~~~~~~~~~~~l~~~~~~~v~~~~~D~~~~~~~~~~~~~~~~~  122 (248)
                      .++++|+++||||++|||++++++|+++|++|++++|+++++++..+++++.+. ++.++.+|++|.++++++++++.++
T Consensus         4 ~~l~~k~vlITGas~gIG~~la~~la~~G~~Vvl~~R~~~~l~~~~~~l~~~g~-~~~~v~~Dv~d~~~v~~~~~~~~~~   82 (334)
T PRK07109          4 KPIGRQVVVITGASAGVGRATARAFARRGAKVVLLARGEEGLEALAAEIRAAGG-EALAVVADVADAEAVQAAADRAEEE   82 (334)
T ss_pred             CCCCCCEEEEECCCCHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHHcCC-cEEEEEecCCCHHHHHHHHHHHHHH
Confidence            468899999999999999999999999999999999999888888888876554 7889999999999999999999999


Q ss_pred             cCCccEEEEccccCCcccccccCChHHHHHHHHhhhHHHHHHHHHHhhhhhhc-CCeEEEEcCccccccCCCCccchHHH
Q 044010          123 FGRLDHLVNNAGISSVALFEDIVNITDFKQIMNINFWGSVYTTRFAVPHLRYT-KGKIVVLSSAASWLTAPRMSFYNASK  201 (248)
Q Consensus       123 ~g~id~vv~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~-~g~iV~isS~~~~~~~~~~~~Y~~sK  201 (248)
                      +|++|++|||||.....++.+ .+.+++++.+++|+.+++.+++.++|.|.++ .|+||++||..+..+.+....|++||
T Consensus        83 ~g~iD~lInnAg~~~~~~~~~-~~~~~~~~~~~vN~~g~~~~~~~~l~~~~~~~~g~iV~isS~~~~~~~~~~~~Y~asK  161 (334)
T PRK07109         83 LGPIDTWVNNAMVTVFGPFED-VTPEEFRRVTEVTYLGVVHGTLAALRHMRPRDRGAIIQVGSALAYRSIPLQSAYCAAK  161 (334)
T ss_pred             CCCCCEEEECCCcCCCCchhh-CCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcCCcEEEEeCChhhccCCCcchHHHHHH
Confidence            999999999999876655555 5789999999999999999999999999765 58999999999999989999999999


Q ss_pred             HHHHHHHHHHHHHhCC---CeEEEEEecCccccCccc
Q 044010          202 AALVLFFETLRVELGS---DVGVTIVTPGFIESELTQ  235 (248)
Q Consensus       202 aal~~l~~~la~~~~~---~i~v~~v~pg~v~T~~~~  235 (248)
                      +++++++++++.|+.+   +|+|++|+||.++|++..
T Consensus       162 ~a~~~~~~~l~~el~~~~~~I~v~~v~Pg~v~T~~~~  198 (334)
T PRK07109        162 HAIRGFTDSLRCELLHDGSPVSVTMVQPPAVNTPQFD  198 (334)
T ss_pred             HHHHHHHHHHHHHHhhcCCCeEEEEEeCCCccCchhh
Confidence            9999999999999853   499999999999999865

>PRK07677 short chain dehydrogenase; Provisional

Probab=100.00  E-value=7.5e-34  Score=238.84  Aligned_cols=184  Identities=31%  Similarity=0.508  Sum_probs=164.6

Q ss_pred             CCEEEEcCCCChHHHHHHHHHHHcCCeEEEEeCCcchHHHHHHHHHhhCCCcEEEEEccCCCHHHHHHHHHHHHhHcCCc
Q 044010           47 GKVVIITGASSGIGEHLAYEYARRGACLALCARREKSLEEVADTAREIGSPDVITIRADVSKVDDCRSLVEETMNHFGRL  126 (248)
Q Consensus        47 ~k~~lVtGg~~gIG~aia~~l~~~G~~V~l~~r~~~~~~~~~~~l~~~~~~~v~~~~~D~~~~~~~~~~~~~~~~~~g~i  126 (248)
                      ||+++||||++|||.+++++|+++|++|++++|+.++.++..+++++.+ .++.++.+|++|+++++++++++.+.++++
T Consensus         1 ~k~~lItG~s~giG~~ia~~l~~~G~~Vi~~~r~~~~~~~~~~~~~~~~-~~~~~~~~D~~~~~~~~~~~~~~~~~~~~i   79 (252)
T PRK07677          1 EKVVIITGGSSGMGKAMAKRFAEEGANVVITGRTKEKLEEAKLEIEQFP-GQVLTVQMDVRNPEDVQKMVEQIDEKFGRI   79 (252)
T ss_pred             CCEEEEeCCCChHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcC-CcEEEEEecCCCHHHHHHHHHHHHHHhCCc
Confidence            6899999999999999999999999999999999887777777776554 378899999999999999999999999999


Q ss_pred             cEEEEccccCCcccccccCChHHHHHHHHhhhHHHHHHHHHHhhhhhhc--CCeEEEEcCccccccCCCCccchHHHHHH
Q 044010          127 DHLVNNAGISSVALFEDIVNITDFKQIMNINFWGSVYTTRFAVPHLRYT--KGKIVVLSSAASWLTAPRMSFYNASKAAL  204 (248)
Q Consensus       127 d~vv~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~--~g~iV~isS~~~~~~~~~~~~Y~~sKaal  204 (248)
                      |++|||+|.....+..+ .+.++|++.+++|+.+++.+.+++.+.|.+.  +|+||++||..+..+.+...+|++||+|+
T Consensus        80 d~lI~~ag~~~~~~~~~-~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~g~ii~isS~~~~~~~~~~~~Y~~sKaa~  158 (252)
T PRK07677         80 DALINNAAGNFICPAED-LSVNGWNSVIDIVLNGTFYCSQAVGKYWIEKGIKGNIINMVATYAWDAGPGVIHSAAAKAGV  158 (252)
T ss_pred             cEEEECCCCCCCCCccc-CCHHHHHHHHhHhhHHHHHHHHHHHHHHHhcCCCEEEEEEcChhhccCCCCCcchHHHHHHH
Confidence            99999999765444444 5789999999999999999999999987643  48999999999988888889999999999


Q ss_pred             HHHHHHHHHHhCC--CeEEEEEecCccccC
Q 044010          205 VLFFETLRVELGS--DVGVTIVTPGFIESE  232 (248)
Q Consensus       205 ~~l~~~la~~~~~--~i~v~~v~pg~v~T~  232 (248)
                      ++++++++.|+.+  ++|||+|+||+++|+
T Consensus       159 ~~~~~~la~e~~~~~gi~v~~v~PG~v~~~  188 (252)
T PRK07677        159 LAMTRTLAVEWGRKYGIRVNAIAPGPIERT  188 (252)
T ss_pred             HHHHHHHHHHhCcccCeEEEEEeecccccc
Confidence            9999999999964  599999999999963

>PRK08278 short chain dehydrogenase; Provisional

Probab=100.00  E-value=7.4e-34  Score=241.94  Aligned_cols=193  Identities=26%  Similarity=0.392  Sum_probs=168.0

Q ss_pred             cCCCCCEEEEcCCCChHHHHHHHHHHHcCCeEEEEeCCcch-------HHHHHHHHHhhCCCcEEEEEccCCCHHHHHHH
Q 044010           43 EDVSGKVVIITGASSGIGEHLAYEYARRGACLALCARREKS-------LEEVADTAREIGSPDVITIRADVSKVDDCRSL  115 (248)
Q Consensus        43 ~~~~~k~~lVtGg~~gIG~aia~~l~~~G~~V~l~~r~~~~-------~~~~~~~l~~~~~~~v~~~~~D~~~~~~~~~~  115 (248)
                      +++++|+++||||++|||.+++++|+++|++|++++|+.+.       +++..++++..+ .++.++.+|+++.++++++
T Consensus         2 ~~~~~k~vlItGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~-~~~~~~~~D~~~~~~i~~~   80 (273)
T PRK08278          2 MSLSGKTLFITGASRGIGLAIALRAARDGANIVIAAKTAEPHPKLPGTIHTAAEEIEAAG-GQALPLVGDVRDEDQVAAA   80 (273)
T ss_pred             CCCCCCEEEEECCCchHHHHHHHHHHHCCCEEEEEecccccccchhhHHHHHHHHHHhcC-CceEEEEecCCCHHHHHHH
Confidence            46889999999999999999999999999999999997653       344455555544 3788999999999999999


Q ss_pred             HHHHHhHcCCccEEEEccccCCcccccccCChHHHHHHHHhhhHHHHHHHHHHhhhhhhc-CCeEEEEcCccccccC--C
Q 044010          116 VEETMNHFGRLDHLVNNAGISSVALFEDIVNITDFKQIMNINFWGSVYTTRFAVPHLRYT-KGKIVVLSSAASWLTA--P  192 (248)
Q Consensus       116 ~~~~~~~~g~id~vv~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~-~g~iV~isS~~~~~~~--~  192 (248)
                      ++++.+.++++|++|||||...+.+..+ .+.++|++.+++|+.+++.+++++.|.|.++ +|+|+++||..+..+.  +
T Consensus        81 ~~~~~~~~g~id~li~~ag~~~~~~~~~-~~~~~~~~~~~vN~~~~~~l~~~~~~~~~~~~~g~iv~iss~~~~~~~~~~  159 (273)
T PRK08278         81 VAKAVERFGGIDICVNNASAINLTGTED-TPMKRFDLMQQINVRGTFLVSQACLPHLKKSENPHILTLSPPLNLDPKWFA  159 (273)
T ss_pred             HHHHHHHhCCCCEEEECCCCcCCCCccc-CCHHHHHHHHHHhchHHHHHHHHHHHHHHhcCCCEEEEECCchhccccccC
Confidence            9999999999999999999876655554 5779999999999999999999999998755 4899999998877766  7


Q ss_pred             CCccchHHHHHHHHHHHHHHHHhCC-CeEEEEEecC-ccccCccccc
Q 044010          193 RMSFYNASKAALVLFFETLRVELGS-DVGVTIVTPG-FIESELTQGK  237 (248)
Q Consensus       193 ~~~~Y~~sKaal~~l~~~la~~~~~-~i~v~~v~pg-~v~T~~~~~~  237 (248)
                      ++.+|++||+++++++++++.|+++ +|+||+|+|| +++|++.+..
T Consensus       160 ~~~~Y~~sK~a~~~~~~~la~el~~~~I~v~~i~Pg~~i~t~~~~~~  206 (273)
T PRK08278        160 PHTAYTMAKYGMSLCTLGLAEEFRDDGIAVNALWPRTTIATAAVRNL  206 (273)
T ss_pred             CcchhHHHHHHHHHHHHHHHHHhhhcCcEEEEEeCCCccccHHHHhc
Confidence            8899999999999999999999987 4999999999 6899876643

>KOG4169 consensus 15-hydroxyprostaglandin dehydrogenase and related dehydrogenases [Lipid transport and metabolism; General function prediction only]

Probab=100.00  E-value=1.6e-35  Score=236.48  Aligned_cols=185  Identities=30%  Similarity=0.454  Sum_probs=164.1

Q ss_pred             cCCCCCEEEEcCCCChHHHHHHHHHHHcCCeEEEEeCCcchHHHHHHHHHh-hCCCcEEEEEccCCCHHHHHHHHHHHHh
Q 044010           43 EDVSGKVVIITGASSGIGEHLAYEYARRGACLALCARREKSLEEVADTARE-IGSPDVITIRADVSKVDDCRSLVEETMN  121 (248)
Q Consensus        43 ~~~~~k~~lVtGg~~gIG~aia~~l~~~G~~V~l~~r~~~~~~~~~~~l~~-~~~~~v~~~~~D~~~~~~~~~~~~~~~~  121 (248)
                      ++++||.+++|||.||||++++++|+++|..+.++..+.++.+...+ +++ .+..++.|++||+++..+++++++++.+
T Consensus         1 m~~tGKna~vtggagGIGl~~sk~Ll~kgik~~~i~~~~En~~a~ak-L~ai~p~~~v~F~~~DVt~~~~~~~~f~ki~~   79 (261)
T KOG4169|consen    1 MDLTGKNALVTGGAGGIGLATSKALLEKGIKVLVIDDSEENPEAIAK-LQAINPSVSVIFIKCDVTNRGDLEAAFDKILA   79 (261)
T ss_pred             CcccCceEEEecCCchhhHHHHHHHHHcCchheeehhhhhCHHHHHH-HhccCCCceEEEEEeccccHHHHHHHHHHHHH
Confidence            36789999999999999999999999999988777777777555444 444 4455789999999999999999999999


Q ss_pred             HcCCccEEEEccccCCcccccccCChHHHHHHHHhhhHHHHHHHHHHhhhhhhcC----CeEEEEcCccccccCCCCccc
Q 044010          122 HFGRLDHLVNNAGISSVALFEDIVNITDFKQIMNINFWGSVYTTRFAVPHLRYTK----GKIVVLSSAASWLTAPRMSFY  197 (248)
Q Consensus       122 ~~g~id~vv~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~----g~iV~isS~~~~~~~~~~~~Y  197 (248)
                      .+|.+|++||+||+..         ..+|++++.+|+.|.++-....+|+|.++.    |-|||+||..|..|.|..+.|
T Consensus        80 ~fg~iDIlINgAGi~~---------dkd~e~Ti~vNLtgvin~T~~alpyMdk~~gG~GGiIvNmsSv~GL~P~p~~pVY  150 (261)
T KOG4169|consen   80 TFGTIDILINGAGILD---------DKDWERTINVNLTGVINGTQLALPYMDKKQGGKGGIIVNMSSVAGLDPMPVFPVY  150 (261)
T ss_pred             HhCceEEEEccccccc---------chhHHHhhccchhhhhhhhhhhhhhhhhhcCCCCcEEEEeccccccCccccchhh
Confidence            9999999999999864         367999999999999999999999997543    789999999999999999999


Q ss_pred             hHHHHHHHHHHHHHHHHh---CCCeEEEEEecCccccCccccc
Q 044010          198 NASKAALVLFFETLRVEL---GSDVGVTIVTPGFIESELTQGK  237 (248)
Q Consensus       198 ~~sKaal~~l~~~la~~~---~~~i~v~~v~pg~v~T~~~~~~  237 (248)
                      ++||+++.+|++++|...   ..+||+++||||+++|++....
T Consensus       151 ~AsKaGVvgFTRSla~~ayy~~sGV~~~avCPG~t~t~l~~~~  193 (261)
T KOG4169|consen  151 AASKAGVVGFTRSLADLAYYQRSGVRFNAVCPGFTRTDLAENI  193 (261)
T ss_pred             hhcccceeeeehhhhhhhhHhhcCEEEEEECCCcchHHHHHHH
Confidence            999999999999987665   3469999999999999998765

>PRK07856 short chain dehydrogenase; Provisional

Probab=100.00  E-value=6.7e-34  Score=239.15  Aligned_cols=184  Identities=30%  Similarity=0.454  Sum_probs=164.7

Q ss_pred             cCCCCCEEEEcCCCChHHHHHHHHHHHcCCeEEEEeCCcchHHHHHHHHHhhCCCcEEEEEccCCCHHHHHHHHHHHHhH
Q 044010           43 EDVSGKVVIITGASSGIGEHLAYEYARRGACLALCARREKSLEEVADTAREIGSPDVITIRADVSKVDDCRSLVEETMNH  122 (248)
Q Consensus        43 ~~~~~k~~lVtGg~~gIG~aia~~l~~~G~~V~l~~r~~~~~~~~~~~l~~~~~~~v~~~~~D~~~~~~~~~~~~~~~~~  122 (248)
                      +++++|+++||||++|||++++++|+++|++|++++|+.++        . ..+.++.++++|+++.++++++++++.+.
T Consensus         2 ~~~~~k~~lItGas~gIG~~la~~l~~~g~~v~~~~r~~~~--------~-~~~~~~~~~~~D~~~~~~~~~~~~~~~~~   72 (252)
T PRK07856          2 LDLTGRVVLVTGGTRGIGAGIARAFLAAGATVVVCGRRAPE--------T-VDGRPAEFHAADVRDPDQVAALVDAIVER   72 (252)
T ss_pred             CCCCCCEEEEeCCCchHHHHHHHHHHHCCCEEEEEeCChhh--------h-hcCCceEEEEccCCCHHHHHHHHHHHHHH
Confidence            46899999999999999999999999999999999998653        1 12236889999999999999999999999


Q ss_pred             cCCccEEEEccccCCcccccccCChHHHHHHHHhhhHHHHHHHHHHhhhhhhc--CCeEEEEcCccccccCCCCccchHH
Q 044010          123 FGRLDHLVNNAGISSVALFEDIVNITDFKQIMNINFWGSVYTTRFAVPHLRYT--KGKIVVLSSAASWLTAPRMSFYNAS  200 (248)
Q Consensus       123 ~g~id~vv~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~--~g~iV~isS~~~~~~~~~~~~Y~~s  200 (248)
                      ++++|++|||||.....+..+ .+.++|++.+++|+.+++.+++.+.+.|.++  .|+||++||..+..+.++...|+++
T Consensus        73 ~~~id~vi~~ag~~~~~~~~~-~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~g~ii~isS~~~~~~~~~~~~Y~~s  151 (252)
T PRK07856         73 HGRLDVLVNNAGGSPYALAAE-ASPRFHEKIVELNLLAPLLVAQAANAVMQQQPGGGSIVNIGSVSGRRPSPGTAAYGAA  151 (252)
T ss_pred             cCCCCEEEECCCCCCCCCccc-CCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcCCCcEEEEEcccccCCCCCCCchhHHH
Confidence            999999999999876555444 5779999999999999999999999988753  3899999999999999999999999


Q ss_pred             HHHHHHHHHHHHHHhCCCeEEEEEecCccccCcccc
Q 044010          201 KAALVLFFETLRVELGSDVGVTIVTPGFIESELTQG  236 (248)
Q Consensus       201 Kaal~~l~~~la~~~~~~i~v~~v~pg~v~T~~~~~  236 (248)
                      |+++++++++++.|++++|+||+|+||+++|++...
T Consensus       152 K~a~~~l~~~la~e~~~~i~v~~i~Pg~v~t~~~~~  187 (252)
T PRK07856        152 KAGLLNLTRSLAVEWAPKVRVNAVVVGLVRTEQSEL  187 (252)
T ss_pred             HHHHHHHHHHHHHHhcCCeEEEEEEeccccChHHhh
Confidence            999999999999999877999999999999998654

>PRK07825 short chain dehydrogenase; Provisional

Probab=100.00  E-value=7.6e-34  Score=241.50  Aligned_cols=189  Identities=33%  Similarity=0.479  Sum_probs=170.1

Q ss_pred             cCCCCCEEEEcCCCChHHHHHHHHHHHcCCeEEEEeCCcchHHHHHHHHHhhCCCcEEEEEccCCCHHHHHHHHHHHHhH
Q 044010           43 EDVSGKVVIITGASSGIGEHLAYEYARRGACLALCARREKSLEEVADTAREIGSPDVITIRADVSKVDDCRSLVEETMNH  122 (248)
Q Consensus        43 ~~~~~k~~lVtGg~~gIG~aia~~l~~~G~~V~l~~r~~~~~~~~~~~l~~~~~~~v~~~~~D~~~~~~~~~~~~~~~~~  122 (248)
                      +++++|+++||||++|||++++++|+++|++|++++|++++.++..+++.     ++.++.+|++|.++++++++++.+.
T Consensus         1 ~~~~~~~ilVtGasggiG~~la~~l~~~G~~v~~~~r~~~~~~~~~~~~~-----~~~~~~~D~~~~~~~~~~~~~~~~~   75 (273)
T PRK07825          1 DDLRGKVVAITGGARGIGLATARALAALGARVAIGDLDEALAKETAAELG-----LVVGGPLDVTDPASFAAFLDAVEAD   75 (273)
T ss_pred             CCCCCCEEEEeCCCchHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHhc-----cceEEEccCCCHHHHHHHHHHHHHH
Confidence            46789999999999999999999999999999999999877766655542     4778999999999999999999999


Q ss_pred             cCCccEEEEccccCCcccccccCChHHHHHHHHhhhHHHHHHHHHHhhhhhhc-CCeEEEEcCccccccCCCCccchHHH
Q 044010          123 FGRLDHLVNNAGISSVALFEDIVNITDFKQIMNINFWGSVYTTRFAVPHLRYT-KGKIVVLSSAASWLTAPRMSFYNASK  201 (248)
Q Consensus       123 ~g~id~vv~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~-~g~iV~isS~~~~~~~~~~~~Y~~sK  201 (248)
                      ++++|++|||||.....+..+ .+.+++++++++|+.+++.+++.+.|.|.++ .|+||++||..+..+.++...|++||
T Consensus        76 ~~~id~li~~ag~~~~~~~~~-~~~~~~~~~~~~n~~g~~~~~~~~~~~~~~~~~g~iv~isS~~~~~~~~~~~~Y~asK  154 (273)
T PRK07825         76 LGPIDVLVNNAGVMPVGPFLD-EPDAVTRRILDVNVYGVILGSKLAAPRMVPRGRGHVVNVASLAGKIPVPGMATYCASK  154 (273)
T ss_pred             cCCCCEEEECCCcCCCCcccc-CCHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCCCEEEEEcCccccCCCCCCcchHHHH
Confidence            999999999999887665555 4778999999999999999999999998754 48999999999999999999999999


Q ss_pred             HHHHHHHHHHHHHhCC-CeEEEEEecCccccCccccc
Q 044010          202 AALVLFFETLRVELGS-DVGVTIVTPGFIESELTQGK  237 (248)
Q Consensus       202 aal~~l~~~la~~~~~-~i~v~~v~pg~v~T~~~~~~  237 (248)
                      +++++++++++.|+.+ +|++++|+||+++|++....
T Consensus       155 aa~~~~~~~l~~el~~~gi~v~~v~Pg~v~t~~~~~~  191 (273)
T PRK07825        155 HAVVGFTDAARLELRGTGVHVSVVLPSFVNTELIAGT  191 (273)
T ss_pred             HHHHHHHHHHHHHhhccCcEEEEEeCCcCcchhhccc
Confidence            9999999999999976 59999999999999987654

>PRK07890 short chain dehydrogenase; Provisional

Probab=100.00  E-value=8e-34  Score=238.98  Aligned_cols=192  Identities=31%  Similarity=0.512  Sum_probs=171.8

Q ss_pred             CCCCCEEEEcCCCChHHHHHHHHHHHcCCeEEEEeCCcchHHHHHHHHHhhCCCcEEEEEccCCCHHHHHHHHHHHHhHc
Q 044010           44 DVSGKVVIITGASSGIGEHLAYEYARRGACLALCARREKSLEEVADTAREIGSPDVITIRADVSKVDDCRSLVEETMNHF  123 (248)
Q Consensus        44 ~~~~k~~lVtGg~~gIG~aia~~l~~~G~~V~l~~r~~~~~~~~~~~l~~~~~~~v~~~~~D~~~~~~~~~~~~~~~~~~  123 (248)
                      .+++|+++||||++|||++++++|+++|++|++++|++++.++..+++++.+. ++.++.+|++|.++++++++++.+++
T Consensus         2 ~l~~k~vlItGa~~~IG~~la~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~-~~~~~~~D~~~~~~~~~~~~~~~~~~   80 (258)
T PRK07890          2 LLKGKVVVVSGVGPGLGRTLAVRAARAGADVVLAARTAERLDEVAAEIDDLGR-RALAVPTDITDEDQCANLVALALERF   80 (258)
T ss_pred             ccCCCEEEEECCCCcHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHHHHHhCC-ceEEEecCCCCHHHHHHHHHHHHHHc
Confidence            46889999999999999999999999999999999998877777777765443 68899999999999999999999999


Q ss_pred             CCccEEEEccccCCcccccccCChHHHHHHHHhhhHHHHHHHHHHhhhhhhcCCeEEEEcCccccccCCCCccchHHHHH
Q 044010          124 GRLDHLVNNAGISSVALFEDIVNITDFKQIMNINFWGSVYTTRFAVPHLRYTKGKIVVLSSAASWLTAPRMSFYNASKAA  203 (248)
Q Consensus       124 g~id~vv~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~g~iV~isS~~~~~~~~~~~~Y~~sKaa  203 (248)
                      +++|++|||||...+.......+.++|++.+++|+.+++.+++++.+.|.+.+++||++||..+..+.++...|+++|++
T Consensus        81 g~~d~vi~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~ii~~sS~~~~~~~~~~~~Y~~sK~a  160 (258)
T PRK07890         81 GRVDALVNNAFRVPSMKPLADADFAHWRAVIELNVLGTLRLTQAFTPALAESGGSIVMINSMVLRHSQPKYGAYKMAKGA  160 (258)
T ss_pred             CCccEEEECCccCCCCCCcccCCHHHHHHHHHhhhHHHHHHHHHHHHHHHhCCCEEEEEechhhccCCCCcchhHHHHHH
Confidence            99999999999764422233357899999999999999999999999987777899999999998888899999999999


Q ss_pred             HHHHHHHHHHHhCC-CeEEEEEecCccccCcccc
Q 044010          204 LVLFFETLRVELGS-DVGVTIVTPGFIESELTQG  236 (248)
Q Consensus       204 l~~l~~~la~~~~~-~i~v~~v~pg~v~T~~~~~  236 (248)
                      ++.++++++.++++ +|++++|+||.+.|++...
T Consensus       161 ~~~l~~~~a~~~~~~~i~v~~v~pg~v~~~~~~~  194 (258)
T PRK07890        161 LLAASQSLATELGPQGIRVNSVAPGYIWGDPLKG  194 (258)
T ss_pred             HHHHHHHHHHHHhhcCcEEEEEeCCccCcHHHHH
Confidence            99999999999977 4999999999999998653

>COG3967 DltE Short-chain dehydrogenase involved in D-alanine esterification of lipoteichoic acid and wall teichoic acid (D-alanine transfer protein) [Cell envelope biogenesis, outer membrane]

Probab=100.00  E-value=3.3e-34  Score=225.65  Aligned_cols=185  Identities=28%  Similarity=0.421  Sum_probs=167.2

Q ss_pred             cCCCCCEEEEcCCCChHHHHHHHHHHHcCCeEEEEeCCcchHHHHHHHHHhhCCCcEEEEEccCCCHHHHHHHHHHHHhH
Q 044010           43 EDVSGKVVIITGASSGIGEHLAYEYARRGACLALCARREKSLEEVADTAREIGSPDVITIRADVSKVDDCRSLVEETMNH  122 (248)
Q Consensus        43 ~~~~~k~~lVtGg~~gIG~aia~~l~~~G~~V~l~~r~~~~~~~~~~~l~~~~~~~v~~~~~D~~~~~~~~~~~~~~~~~  122 (248)
                      |++.|.++|||||++|||+++|++|.+.|-+|++++|++++++++.++..     .+....||+.|.++.+++++++.++
T Consensus         1 mk~tgnTiLITGG~sGIGl~lak~f~elgN~VIi~gR~e~~L~e~~~~~p-----~~~t~v~Dv~d~~~~~~lvewLkk~   75 (245)
T COG3967           1 MKTTGNTILITGGASGIGLALAKRFLELGNTVIICGRNEERLAEAKAENP-----EIHTEVCDVADRDSRRELVEWLKKE   75 (245)
T ss_pred             CcccCcEEEEeCCcchhhHHHHHHHHHhCCEEEEecCcHHHHHHHHhcCc-----chheeeecccchhhHHHHHHHHHhh
Confidence            46789999999999999999999999999999999999988877766543     6778999999999999999999999


Q ss_pred             cCCccEEEEccccCCccccc-ccCChHHHHHHHHhhhHHHHHHHHHHhhhhhhc-CCeEEEEcCccccccCCCCccchHH
Q 044010          123 FGRLDHLVNNAGISSVALFE-DIVNITDFKQIMNINFWGSVYTTRFAVPHLRYT-KGKIVVLSSAASWLTAPRMSFYNAS  200 (248)
Q Consensus       123 ~g~id~vv~~ag~~~~~~~~-~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~-~g~iV~isS~~~~~~~~~~~~Y~~s  200 (248)
                      ++.+|++|||||+.....+. .+...++.++.+++|+.+|+.+.+.++|.+.++ ++.||++||..++.|....+.|+++
T Consensus        76 ~P~lNvliNNAGIqr~~dlt~~e~~~~~~~~eI~~Nl~API~Lt~~~lphl~~q~~a~IInVSSGLafvPm~~~PvYcaT  155 (245)
T COG3967          76 YPNLNVLINNAGIQRNEDLTGAEDLLDDAEQEIATNLLAPIRLTALLLPHLLRQPEATIINVSSGLAFVPMASTPVYCAT  155 (245)
T ss_pred             CCchheeeecccccchhhccCCcchhhHHHHHHHHhhhhHHHHHHHHHHHHHhCCCceEEEeccccccCcccccccchhh
Confidence            99999999999988655443 223457789999999999999999999997755 5999999999999999999999999


Q ss_pred             HHHHHHHHHHHHHHhCC-CeEEEEEecCccccC
Q 044010          201 KAALVLFFETLRVELGS-DVGVTIVTPGFIESE  232 (248)
Q Consensus       201 Kaal~~l~~~la~~~~~-~i~v~~v~pg~v~T~  232 (248)
                      |+|++.++.+|+.+++. +|.|.-+.|..|+|+
T Consensus       156 KAaiHsyt~aLR~Qlk~t~veVIE~~PP~V~t~  188 (245)
T COG3967         156 KAAIHSYTLALREQLKDTSVEVIELAPPLVDTT  188 (245)
T ss_pred             HHHHHHHHHHHHHHhhhcceEEEEecCCceecC
Confidence            99999999999999987 599999999999997

>KOG1610 consensus Corticosteroid 11-beta-dehydrogenase and related short chain-type dehydrogenases [Secondary metabolites biosynthesis, transport and catabolism; General function prediction only]

Probab=100.00  E-value=5.6e-34  Score=238.42  Aligned_cols=199  Identities=30%  Similarity=0.486  Sum_probs=177.7

Q ss_pred             HHhhhhccccCCCCCEEEEcCCCChHHHHHHHHHHHcCCeEEEEeCCcchHHHHHHHHHhhCCCcEEEEEccCCCHHHHH
Q 044010           34 LSVFNSIFSEDVSGKVVIITGASSGIGEHLAYEYARRGACLALCARREKSLEEVADTAREIGSPDVITIRADVSKVDDCR  113 (248)
Q Consensus        34 ~~~~~~~~~~~~~~k~~lVtGg~~gIG~aia~~l~~~G~~V~l~~r~~~~~~~~~~~l~~~~~~~v~~~~~D~~~~~~~~  113 (248)
                      ++........+.++|.++|||+.+|+|+.+|++|.++|++|....-+++..+....+.+   .++...++.|+|++++++
T Consensus        16 ~~~~~~~~~~~~~~k~VlITGCDSGfG~~LA~~L~~~Gf~V~Agcl~~~gae~L~~~~~---s~rl~t~~LDVT~~esi~   92 (322)
T KOG1610|consen   16 RVRLERQVLDSLSDKAVLITGCDSGFGRLLAKKLDKKGFRVFAGCLTEEGAESLRGETK---SPRLRTLQLDVTKPESVK   92 (322)
T ss_pred             HHHHhhhcccccCCcEEEEecCCcHHHHHHHHHHHhcCCEEEEEeecCchHHHHhhhhc---CCcceeEeeccCCHHHHH
Confidence            33344555568999999999999999999999999999999999988777676665554   347888999999999999


Q ss_pred             HHHHHHHhHcC--CccEEEEccccCCcccccccCChHHHHHHHHhhhHHHHHHHHHHhhhhhhcCCeEEEEcCccccccC
Q 044010          114 SLVEETMNHFG--RLDHLVNNAGISSVALFEDIVNITDFKQIMNINFWGSVYTTRFAVPHLRYTKGKIVVLSSAASWLTA  191 (248)
Q Consensus       114 ~~~~~~~~~~g--~id~vv~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~g~iV~isS~~~~~~~  191 (248)
                      ++.+.+.+..+  .+..+|||||+.......+..+.+++++++++|+.|++.+++.++|.+++.+||||++||..|..+.
T Consensus        93 ~a~~~V~~~l~~~gLwglVNNAGi~~~~g~~ewl~~~d~~~~l~vNllG~irvT~~~lpLlr~arGRvVnvsS~~GR~~~  172 (322)
T KOG1610|consen   93 EAAQWVKKHLGEDGLWGLVNNAGISGFLGPDEWLTVEDYRKVLNVNLLGTIRVTKAFLPLLRRARGRVVNVSSVLGRVAL  172 (322)
T ss_pred             HHHHHHHHhcccccceeEEeccccccccCccccccHHHHHHHHhhhhhhHHHHHHHHHHHHHhccCeEEEecccccCccC
Confidence            99999998764  6999999999776555555568899999999999999999999999999999999999999999999


Q ss_pred             CCCccchHHHHHHHHHHHHHHHHhCC-CeEEEEEecCccccCccc
Q 044010          192 PRMSFYNASKAALVLFFETLRVELGS-DVGVTIVTPGFIESELTQ  235 (248)
Q Consensus       192 ~~~~~Y~~sKaal~~l~~~la~~~~~-~i~v~~v~pg~v~T~~~~  235 (248)
                      |..++|++||+|++.++.++++|+.+ ++.|..|.||..+|++.+
T Consensus       173 p~~g~Y~~SK~aVeaf~D~lR~EL~~fGV~VsiiePG~f~T~l~~  217 (322)
T KOG1610|consen  173 PALGPYCVSKFAVEAFSDSLRRELRPFGVKVSIIEPGFFKTNLAN  217 (322)
T ss_pred             cccccchhhHHHHHHHHHHHHHHHHhcCcEEEEeccCccccccCC
Confidence            99999999999999999999999988 699999999999999987

>PRK07024 short chain dehydrogenase; Provisional

Probab=100.00  E-value=9.4e-34  Score=239.00  Aligned_cols=188  Identities=37%  Similarity=0.525  Sum_probs=166.6

Q ss_pred             CCEEEEcCCCChHHHHHHHHHHHcCCeEEEEeCCcchHHHHHHHHHhhCCCcEEEEEccCCCHHHHHHHHHHHHhHcCCc
Q 044010           47 GKVVIITGASSGIGEHLAYEYARRGACLALCARREKSLEEVADTAREIGSPDVITIRADVSKVDDCRSLVEETMNHFGRL  126 (248)
Q Consensus        47 ~k~~lVtGg~~gIG~aia~~l~~~G~~V~l~~r~~~~~~~~~~~l~~~~~~~v~~~~~D~~~~~~~~~~~~~~~~~~g~i  126 (248)
                      +|+++||||++|||.+++++|+++|++|++++|+.++.++..++++..+  ++.++.+|++|.+++.++++++.+++|.+
T Consensus         2 ~~~vlItGas~gIG~~la~~l~~~G~~v~~~~r~~~~~~~~~~~~~~~~--~~~~~~~Dl~~~~~i~~~~~~~~~~~g~i   79 (257)
T PRK07024          2 PLKVFITGASSGIGQALAREYARQGATLGLVARRTDALQAFAARLPKAA--RVSVYAADVRDADALAAAAADFIAAHGLP   79 (257)
T ss_pred             CCEEEEEcCCcHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHhcccCC--eeEEEEcCCCCHHHHHHHHHHHHHhCCCC
Confidence            4799999999999999999999999999999999877776666554322  68899999999999999999999999999


Q ss_pred             cEEEEccccCCcccccccCChHHHHHHHHhhhHHHHHHHHHHhhhhhhc-CCeEEEEcCccccccCCCCccchHHHHHHH
Q 044010          127 DHLVNNAGISSVALFEDIVNITDFKQIMNINFWGSVYTTRFAVPHLRYT-KGKIVVLSSAASWLTAPRMSFYNASKAALV  205 (248)
Q Consensus       127 d~vv~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~-~g~iV~isS~~~~~~~~~~~~Y~~sKaal~  205 (248)
                      |++|||||........+..+.+++++.+++|+.+++.+++.++|.|.+. +|+||++||..+..+.++...|++||++++
T Consensus        80 d~lv~~ag~~~~~~~~~~~~~~~~~~~~~~n~~g~~~l~~~~l~~~~~~~~~~iv~isS~~~~~~~~~~~~Y~asK~a~~  159 (257)
T PRK07024         80 DVVIANAGISVGTLTEEREDLAVFREVMDTNYFGMVATFQPFIAPMRAARRGTLVGIASVAGVRGLPGAGAYSASKAAAI  159 (257)
T ss_pred             CEEEECCCcCCCccccccCCHHHHHHHHhHhcHHHHHHHHHHHHHHHhcCCCEEEEEechhhcCCCCCCcchHHHHHHHH
Confidence            9999999986544333335678999999999999999999999998654 489999999999999999999999999999


Q ss_pred             HHHHHHHHHhCC-CeEEEEEecCccccCcccc
Q 044010          206 LFFETLRVELGS-DVGVTIVTPGFIESELTQG  236 (248)
Q Consensus       206 ~l~~~la~~~~~-~i~v~~v~pg~v~T~~~~~  236 (248)
                      .++++++.|+.+ +++|++|+||.++|++...
T Consensus       160 ~~~~~l~~e~~~~gi~v~~v~Pg~v~t~~~~~  191 (257)
T PRK07024        160 KYLESLRVELRPAGVRVVTIAPGYIRTPMTAH  191 (257)
T ss_pred             HHHHHHHHHhhccCcEEEEEecCCCcCchhhc
Confidence            999999999976 5999999999999998653

>PRK08703 short chain dehydrogenase; Provisional

Probab=100.00  E-value=1.8e-33  Score=234.65  Aligned_cols=195  Identities=27%  Similarity=0.366  Sum_probs=170.9

Q ss_pred             cCCCCCEEEEcCCCChHHHHHHHHHHHcCCeEEEEeCCcchHHHHHHHHHhhCCCcEEEEEccCCC--HHHHHHHHHHHH
Q 044010           43 EDVSGKVVIITGASSGIGEHLAYEYARRGACLALCARREKSLEEVADTAREIGSPDVITIRADVSK--VDDCRSLVEETM  120 (248)
Q Consensus        43 ~~~~~k~~lVtGg~~gIG~aia~~l~~~G~~V~l~~r~~~~~~~~~~~l~~~~~~~v~~~~~D~~~--~~~~~~~~~~~~  120 (248)
                      .+|++|+++||||++|||.+++++|+++|++|++++|++++.++..+++.+.+...+.++.+|+++  .++++++++++.
T Consensus         2 ~~l~~k~vlItG~sggiG~~la~~l~~~g~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~D~~~~~~~~~~~~~~~i~   81 (239)
T PRK08703          2 ATLSDKTILVTGASQGLGEQVAKAYAAAGATVILVARHQKKLEKVYDAIVEAGHPEPFAIRFDLMSAEEKEFEQFAATIA   81 (239)
T ss_pred             CCCCCCEEEEECCCCcHHHHHHHHHHHcCCEEEEEeCChHHHHHHHHHHHHcCCCCcceEEeeecccchHHHHHHHHHHH
Confidence            368899999999999999999999999999999999999888888788776555567788999986  578999999998


Q ss_pred             hHc-CCccEEEEccccCCcccccccCChHHHHHHHHhhhHHHHHHHHHHhhhhhhc-CCeEEEEcCccccccCCCCccch
Q 044010          121 NHF-GRLDHLVNNAGISSVALFEDIVNITDFKQIMNINFWGSVYTTRFAVPHLRYT-KGKIVVLSSAASWLTAPRMSFYN  198 (248)
Q Consensus       121 ~~~-g~id~vv~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~-~g~iV~isS~~~~~~~~~~~~Y~  198 (248)
                      +.+ +.+|++|||||.........+.+.++|++.+++|+.+++.+++++.|.|.+. ++++|++||..+..+.++..+|+
T Consensus        82 ~~~~~~id~vi~~ag~~~~~~~~~~~~~~~~~~~~~~n~~g~~~l~~~~~~~~~~~~~~~iv~~ss~~~~~~~~~~~~Y~  161 (239)
T PRK08703         82 EATQGKLDGIVHCAGYFYALSPLDFQTVAEWVNQYRINTVAPMGLTRALFPLLKQSPDASVIFVGESHGETPKAYWGGFG  161 (239)
T ss_pred             HHhCCCCCEEEEeccccccCCCccccCHHHHHHHHHHhhhHHHHHHHHHHHHHHhCCCCEEEEEeccccccCCCCccchH
Confidence            888 8999999999976432223335789999999999999999999999998755 48999999999988888889999


Q ss_pred             HHHHHHHHHHHHHHHHhCC--CeEEEEEecCccccCccccc
Q 044010          199 ASKAALVLFFETLRVELGS--DVGVTIVTPGFIESELTQGK  237 (248)
Q Consensus       199 ~sKaal~~l~~~la~~~~~--~i~v~~v~pg~v~T~~~~~~  237 (248)
                      +||++++.++++++.|+.+  +|||++|+||+++|++....
T Consensus       162 ~sKaa~~~~~~~la~e~~~~~~i~v~~v~pG~v~t~~~~~~  202 (239)
T PRK08703        162 ASKAALNYLCKVAADEWERFGNLRANVLVPGPINSPQRIKS  202 (239)
T ss_pred             HhHHHHHHHHHHHHHHhccCCCeEEEEEecCcccCcccccc
Confidence            9999999999999999975  49999999999999987644

>PRK06484 short chain dehydrogenase; Validated

Probab=100.00  E-value=5.3e-34  Score=263.08  Aligned_cols=186  Identities=32%  Similarity=0.469  Sum_probs=166.7

Q ss_pred             CCCCEEEEcCCCChHHHHHHHHHHHcCCeEEEEeCCcchHHHHHHHHHhhCCCcEEEEEccCCCHHHHHHHHHHHHhHcC
Q 044010           45 VSGKVVIITGASSGIGEHLAYEYARRGACLALCARREKSLEEVADTAREIGSPDVITIRADVSKVDDCRSLVEETMNHFG  124 (248)
Q Consensus        45 ~~~k~~lVtGg~~gIG~aia~~l~~~G~~V~l~~r~~~~~~~~~~~l~~~~~~~v~~~~~D~~~~~~~~~~~~~~~~~~g  124 (248)
                      ..||++|||||++|||+++|++|+++|++|++++|+.+++++..+++    +.++..+.+|++|.++++++++++.+++|
T Consensus       267 ~~~k~~lItGas~gIG~~~a~~l~~~G~~V~~~~r~~~~~~~~~~~~----~~~~~~~~~D~~~~~~~~~~~~~~~~~~g  342 (520)
T PRK06484        267 ESPRVVAITGGARGIGRAVADRFAAAGDRLLIIDRDAEGAKKLAEAL----GDEHLSVQADITDEAAVESAFAQIQARWG  342 (520)
T ss_pred             cCCCEEEEECCCcHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHh----CCceeEEEccCCCHHHHHHHHHHHHHHcC
Confidence            47899999999999999999999999999999999987766655444    23677899999999999999999999999


Q ss_pred             CccEEEEccccCCc-ccccccCChHHHHHHHHhhhHHHHHHHHHHhhhhhhcCCeEEEEcCccccccCCCCccchHHHHH
Q 044010          125 RLDHLVNNAGISSV-ALFEDIVNITDFKQIMNINFWGSVYTTRFAVPHLRYTKGKIVVLSSAASWLTAPRMSFYNASKAA  203 (248)
Q Consensus       125 ~id~vv~~ag~~~~-~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~g~iV~isS~~~~~~~~~~~~Y~~sKaa  203 (248)
                      ++|++|||||.... .+..+ .+.++|++++++|+.+++++++.++|.| +++|+||++||.++..+.++..+|++||++
T Consensus       343 ~id~li~nAg~~~~~~~~~~-~~~~~~~~~~~~n~~~~~~~~~~~~~~~-~~~g~iv~isS~~~~~~~~~~~~Y~asKaa  420 (520)
T PRK06484        343 RLDVLVNNAGIAEVFKPSLE-QSAEDFTRVYDVNLSGAFACARAAARLM-SQGGVIVNLGSIASLLALPPRNAYCASKAA  420 (520)
T ss_pred             CCCEEEECCCCcCCCCChhh-CCHHHHHHHHHhCcHHHHHHHHHHHHHh-ccCCEEEEECchhhcCCCCCCchhHHHHHH
Confidence            99999999998643 33334 5789999999999999999999999999 456899999999999999999999999999


Q ss_pred             HHHHHHHHHHHhCCC-eEEEEEecCccccCcccc
Q 044010          204 LVLFFETLRVELGSD-VGVTIVTPGFIESELTQG  236 (248)
Q Consensus       204 l~~l~~~la~~~~~~-i~v~~v~pg~v~T~~~~~  236 (248)
                      +++|+++++.|+++. ||||+|+||+|+|+|...
T Consensus       421 l~~l~~~la~e~~~~gI~vn~v~PG~v~t~~~~~  454 (520)
T PRK06484        421 VTMLSRSLACEWAPAGIRVNTVAPGYIETPAVLA  454 (520)
T ss_pred             HHHHHHHHHHHhhhhCeEEEEEEeCCccCchhhh
Confidence            999999999999874 999999999999998754

>PRK06194 hypothetical protein; Provisional

Probab=100.00  E-value=1.9e-33  Score=240.63  Aligned_cols=192  Identities=32%  Similarity=0.531  Sum_probs=171.4

Q ss_pred             CCCCCEEEEcCCCChHHHHHHHHHHHcCCeEEEEeCCcchHHHHHHHHHhhCCCcEEEEEccCCCHHHHHHHHHHHHhHc
Q 044010           44 DVSGKVVIITGASSGIGEHLAYEYARRGACLALCARREKSLEEVADTAREIGSPDVITIRADVSKVDDCRSLVEETMNHF  123 (248)
Q Consensus        44 ~~~~k~~lVtGg~~gIG~aia~~l~~~G~~V~l~~r~~~~~~~~~~~l~~~~~~~v~~~~~D~~~~~~~~~~~~~~~~~~  123 (248)
                      ++++|++|||||++|||.+++++|+++|++|++++|+.+..++..+++...+ .++.++.+|++|.++++++++++.+++
T Consensus         3 ~~~~k~vlVtGasggIG~~la~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~-~~~~~~~~D~~d~~~~~~~~~~~~~~~   81 (287)
T PRK06194          3 DFAGKVAVITGAASGFGLAFARIGAALGMKLVLADVQQDALDRAVAELRAQG-AEVLGVRTDVSDAAQVEALADAALERF   81 (287)
T ss_pred             CCCCCEEEEeCCccHHHHHHHHHHHHCCCEEEEEeCChHHHHHHHHHHHhcC-CeEEEEECCCCCHHHHHHHHHHHHHHc
Confidence            5789999999999999999999999999999999999887777777776543 368889999999999999999999999


Q ss_pred             CCccEEEEccccCCcccccccCChHHHHHHHHhhhHHHHHHHHHHhhhhhhcC-------CeEEEEcCccccccCCCCcc
Q 044010          124 GRLDHLVNNAGISSVALFEDIVNITDFKQIMNINFWGSVYTTRFAVPHLRYTK-------GKIVVLSSAASWLTAPRMSF  196 (248)
Q Consensus       124 g~id~vv~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~-------g~iV~isS~~~~~~~~~~~~  196 (248)
                      |++|++|||||.....+..+ .+.++|++.+++|+.+++.++++++|.|.+..       |++|++||.++..+.++.+.
T Consensus        82 g~id~vi~~Ag~~~~~~~~~-~~~~~~~~~~~~N~~g~~~~~~~~~~~~~~~~~~~~~~~g~iv~~sS~~~~~~~~~~~~  160 (287)
T PRK06194         82 GAVHLLFNNAGVGAGGLVWE-NSLADWEWVLGVNLWGVIHGVRAFTPLMLAAAEKDPAYEGHIVNTASMAGLLAPPAMGI  160 (287)
T ss_pred             CCCCEEEECCCCCCCCCccc-CCHHHHHHHHhhccHHHHHHHHHHHHHHHhcCCCCCCCCeEEEEeCChhhccCCCCCcc
Confidence            99999999999877655544 47799999999999999999999999986432       69999999999998889999


Q ss_pred             chHHHHHHHHHHHHHHHHhCC---CeEEEEEecCccccCccccc
Q 044010          197 YNASKAALVLFFETLRVELGS---DVGVTIVTPGFIESELTQGK  237 (248)
Q Consensus       197 Y~~sKaal~~l~~~la~~~~~---~i~v~~v~pg~v~T~~~~~~  237 (248)
                      |++||+++++++++++.+++.   ++|+++++||+++|++....
T Consensus       161 Y~~sK~a~~~~~~~l~~e~~~~~~~irv~~v~pg~i~t~~~~~~  204 (287)
T PRK06194        161 YNVSKHAVVSLTETLYQDLSLVTDQVGASVLCPYFVPTGIWQSE  204 (287)
T ss_pred             hHHHHHHHHHHHHHHHHHHhhcCCCeEEEEEEeCcccCcccccc
Confidence            999999999999999999863   49999999999999987643

>PRK06124 gluconate 5-dehydrogenase; Provisional

Probab=100.00  E-value=1.5e-33  Score=237.30  Aligned_cols=194  Identities=21%  Similarity=0.397  Sum_probs=174.7

Q ss_pred             ccCCCCCEEEEcCCCChHHHHHHHHHHHcCCeEEEEeCCcchHHHHHHHHHhhCCCcEEEEEccCCCHHHHHHHHHHHHh
Q 044010           42 SEDVSGKVVIITGASSGIGEHLAYEYARRGACLALCARREKSLEEVADTAREIGSPDVITIRADVSKVDDCRSLVEETMN  121 (248)
Q Consensus        42 ~~~~~~k~~lVtGg~~gIG~aia~~l~~~G~~V~l~~r~~~~~~~~~~~l~~~~~~~v~~~~~D~~~~~~~~~~~~~~~~  121 (248)
                      +.++++|+++||||+++||.+++++|+++|++|++++|+.++.+...+++++.+. ++.++.+|+++.+++.++++++.+
T Consensus         6 ~~~~~~k~ilItGas~~IG~~la~~l~~~G~~v~~~~r~~~~~~~~~~~~~~~~~-~~~~~~~Dl~~~~~~~~~~~~~~~   84 (256)
T PRK06124          6 RFSLAGQVALVTGSARGLGFEIARALAGAGAHVLVNGRNAATLEAAVAALRAAGG-AAEALAFDIADEEAVAAAFARIDA   84 (256)
T ss_pred             ccCCCCCEEEEECCCchHHHHHHHHHHHcCCeEEEEeCCHHHHHHHHHHHHhcCC-ceEEEEccCCCHHHHHHHHHHHHH
Confidence            4568999999999999999999999999999999999998887777777766543 688999999999999999999999


Q ss_pred             HcCCccEEEEccccCCcccccccCChHHHHHHHHhhhHHHHHHHHHHhhhhhhc-CCeEEEEcCccccccCCCCccchHH
Q 044010          122 HFGRLDHLVNNAGISSVALFEDIVNITDFKQIMNINFWGSVYTTRFAVPHLRYT-KGKIVVLSSAASWLTAPRMSFYNAS  200 (248)
Q Consensus       122 ~~g~id~vv~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~-~g~iV~isS~~~~~~~~~~~~Y~~s  200 (248)
                      .++++|++|||+|.....++.+ .+.++|++.+++|+.+++.+.+.+.+.|.+. .+++|++||..+..+.++..+|+++
T Consensus        85 ~~~~id~vi~~ag~~~~~~~~~-~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~~iv~~ss~~~~~~~~~~~~Y~~s  163 (256)
T PRK06124         85 EHGRLDILVNNVGARDRRPLAE-LDDAAIRALLETDLVAPILLSRLAAQRMKRQGYGRIIAITSIAGQVARAGDAVYPAA  163 (256)
T ss_pred             hcCCCCEEEECCCCCCCCChhh-CCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcCCcEEEEEeechhccCCCCccHhHHH
Confidence            9999999999999876655554 4679999999999999999999999998644 4899999999999888999999999


Q ss_pred             HHHHHHHHHHHHHHhCC-CeEEEEEecCccccCccccc
Q 044010          201 KAALVLFFETLRVELGS-DVGVTIVTPGFIESELTQGK  237 (248)
Q Consensus       201 Kaal~~l~~~la~~~~~-~i~v~~v~pg~v~T~~~~~~  237 (248)
                      |++++++++.++.|+++ +++|++|+||+++|++....
T Consensus       164 K~a~~~~~~~la~e~~~~~i~v~~i~pg~v~t~~~~~~  201 (256)
T PRK06124        164 KQGLTGLMRALAAEFGPHGITSNAIAPGYFATETNAAM  201 (256)
T ss_pred             HHHHHHHHHHHHHHHHHhCcEEEEEEECCccCcchhhh
Confidence            99999999999999987 59999999999999986544

>PRK08628 short chain dehydrogenase; Provisional

Probab=100.00  E-value=1e-33  Score=238.60  Aligned_cols=190  Identities=29%  Similarity=0.432  Sum_probs=169.0

Q ss_pred             cCCCCCEEEEcCCCChHHHHHHHHHHHcCCeEEEEeCCcchHHHHHHHHHhhCCCcEEEEEccCCCHHHHHHHHHHHHhH
Q 044010           43 EDVSGKVVIITGASSGIGEHLAYEYARRGACLALCARREKSLEEVADTAREIGSPDVITIRADVSKVDDCRSLVEETMNH  122 (248)
Q Consensus        43 ~~~~~k~~lVtGg~~gIG~aia~~l~~~G~~V~l~~r~~~~~~~~~~~l~~~~~~~v~~~~~D~~~~~~~~~~~~~~~~~  122 (248)
                      .+++||++|||||++|||++++++|+++|++|++++|+.++. +..+++++.+. ++.++.+|+++.++++++++++.+.
T Consensus         3 ~~l~~~~ilItGasggiG~~la~~l~~~G~~v~~~~r~~~~~-~~~~~~~~~~~-~~~~~~~D~~~~~~~~~~~~~~~~~   80 (258)
T PRK08628          3 LNLKDKVVIVTGGASGIGAAISLRLAEEGAIPVIFGRSAPDD-EFAEELRALQP-RAEFVQVDLTDDAQCRDAVEQTVAK   80 (258)
T ss_pred             CCcCCCEEEEeCCCChHHHHHHHHHHHcCCcEEEEcCChhhH-HHHHHHHhcCC-ceEEEEccCCCHHHHHHHHHHHHHh
Confidence            579999999999999999999999999999999999988765 55566655443 6889999999999999999999999


Q ss_pred             cCCccEEEEccccCCcccccccCChHHHHHHHHhhhHHHHHHHHHHhhhhhhcCCeEEEEcCccccccCCCCccchHHHH
Q 044010          123 FGRLDHLVNNAGISSVALFEDIVNITDFKQIMNINFWGSVYTTRFAVPHLRYTKGKIVVLSSAASWLTAPRMSFYNASKA  202 (248)
Q Consensus       123 ~g~id~vv~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~g~iV~isS~~~~~~~~~~~~Y~~sKa  202 (248)
                      ++++|++|||||........+ .. ++|++.+++|+.+++.+.+.+.|.+++..|+||++||..+..+.++...|++||+
T Consensus        81 ~~~id~vi~~ag~~~~~~~~~-~~-~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~iv~~ss~~~~~~~~~~~~Y~~sK~  158 (258)
T PRK08628         81 FGRIDGLVNNAGVNDGVGLEA-GR-EAFVASLERNLIHYYVMAHYCLPHLKASRGAIVNISSKTALTGQGGTSGYAAAKG  158 (258)
T ss_pred             cCCCCEEEECCcccCCCcccC-CH-HHHHHHHhhhhHHHHHHHHHHHHHhhccCcEEEEECCHHhccCCCCCchhHHHHH
Confidence            999999999999765444333 34 8999999999999999999999998766789999999999988888999999999


Q ss_pred             HHHHHHHHHHHHhCC-CeEEEEEecCccccCcccc
Q 044010          203 ALVLFFETLRVELGS-DVGVTIVTPGFIESELTQG  236 (248)
Q Consensus       203 al~~l~~~la~~~~~-~i~v~~v~pg~v~T~~~~~  236 (248)
                      ++++++++++.|+.+ +|+||+|+||.++|++...
T Consensus       159 a~~~~~~~l~~e~~~~~i~v~~v~pg~v~t~~~~~  193 (258)
T PRK08628        159 AQLALTREWAVALAKDGVRVNAVIPAEVMTPLYEN  193 (258)
T ss_pred             HHHHHHHHHHHHHhhcCeEEEEEecCccCCHHHHH
Confidence            999999999999976 4999999999999998654

>PRK06483 dihydromonapterin reductase; Provisional

Probab=100.00  E-value=1.1e-33  Score=235.39  Aligned_cols=180  Identities=21%  Similarity=0.197  Sum_probs=158.1

Q ss_pred             CCEEEEcCCCChHHHHHHHHHHHcCCeEEEEeCCcchHHHHHHHHHhhCCCcEEEEEccCCCHHHHHHHHHHHHhHcCCc
Q 044010           47 GKVVIITGASSGIGEHLAYEYARRGACLALCARREKSLEEVADTAREIGSPDVITIRADVSKVDDCRSLVEETMNHFGRL  126 (248)
Q Consensus        47 ~k~~lVtGg~~gIG~aia~~l~~~G~~V~l~~r~~~~~~~~~~~l~~~~~~~v~~~~~D~~~~~~~~~~~~~~~~~~g~i  126 (248)
                      +|++|||||++|||++++++|+++|++|++++|+.++.   .+.+++.   .+.++.+|++|.++++++++++.+.++++
T Consensus         2 ~k~vlItGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~---~~~~~~~---~~~~~~~D~~~~~~~~~~~~~~~~~~~~i   75 (236)
T PRK06483          2 PAPILITGAGQRIGLALAWHLLAQGQPVIVSYRTHYPA---IDGLRQA---GAQCIQADFSTNAGIMAFIDELKQHTDGL   75 (236)
T ss_pred             CceEEEECCCChHHHHHHHHHHHCCCeEEEEeCCchhH---HHHHHHc---CCEEEEcCCCCHHHHHHHHHHHHhhCCCc
Confidence            57999999999999999999999999999999987543   2333332   35678999999999999999999999999


Q ss_pred             cEEEEccccCCcccccccCChHHHHHHHHhhhHHHHHHHHHHhhhhhhc---CCeEEEEcCccccccCCCCccchHHHHH
Q 044010          127 DHLVNNAGISSVALFEDIVNITDFKQIMNINFWGSVYTTRFAVPHLRYT---KGKIVVLSSAASWLTAPRMSFYNASKAA  203 (248)
Q Consensus       127 d~vv~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~---~g~iV~isS~~~~~~~~~~~~Y~~sKaa  203 (248)
                      |++|||||........+ .+.++|++.+++|+.+++.+.+.+.|.|.+.   +|+||++||..+..+.+++.+|++||++
T Consensus        76 d~lv~~ag~~~~~~~~~-~~~~~~~~~~~vn~~~~~~l~~~~~~~~~~~~~~~g~iv~~ss~~~~~~~~~~~~Y~asKaa  154 (236)
T PRK06483         76 RAIIHNASDWLAEKPGA-PLADVLARMMQIHVNAPYLLNLALEDLLRGHGHAASDIIHITDYVVEKGSDKHIAYAASKAA  154 (236)
T ss_pred             cEEEECCccccCCCcCc-cCHHHHHHHHHHcchHHHHHHHHHHHHHHhCCCCCceEEEEcchhhccCCCCCccHHHHHHH
Confidence            99999999765444433 4679999999999999999999999998754   3799999999888888889999999999


Q ss_pred             HHHHHHHHHHHhCCCeEEEEEecCccccCc
Q 044010          204 LVLFFETLRVELGSDVGVTIVTPGFIESEL  233 (248)
Q Consensus       204 l~~l~~~la~~~~~~i~v~~v~pg~v~T~~  233 (248)
                      +++|+++++.|++++||||+|+||++.|+.
T Consensus       155 l~~l~~~~a~e~~~~irvn~v~Pg~~~~~~  184 (236)
T PRK06483        155 LDNMTLSFAAKLAPEVKVNSIAPALILFNE  184 (236)
T ss_pred             HHHHHHHHHHHHCCCcEEEEEccCceecCC
Confidence            999999999999878999999999998864

>PRK07814 short chain dehydrogenase; Provisional

Probab=100.00  E-value=2.3e-33  Score=237.46  Aligned_cols=191  Identities=27%  Similarity=0.403  Sum_probs=172.0

Q ss_pred             CCCCCEEEEcCCCChHHHHHHHHHHHcCCeEEEEeCCcchHHHHHHHHHhhCCCcEEEEEccCCCHHHHHHHHHHHHhHc
Q 044010           44 DVSGKVVIITGASSGIGEHLAYEYARRGACLALCARREKSLEEVADTAREIGSPDVITIRADVSKVDDCRSLVEETMNHF  123 (248)
Q Consensus        44 ~~~~k~~lVtGg~~gIG~aia~~l~~~G~~V~l~~r~~~~~~~~~~~l~~~~~~~v~~~~~D~~~~~~~~~~~~~~~~~~  123 (248)
                      ++++|++|||||++|||.+++++|+++|++|++++|+.++.++..+.++..+ .++.++.+|+++.++++++++++.+.+
T Consensus         7 ~~~~~~vlItGasggIG~~~a~~l~~~G~~Vi~~~r~~~~~~~~~~~l~~~~-~~~~~~~~D~~~~~~~~~~~~~~~~~~   85 (263)
T PRK07814          7 RLDDQVAVVTGAGRGLGAAIALAFAEAGADVLIAARTESQLDEVAEQIRAAG-RRAHVVAADLAHPEATAGLAGQAVEAF   85 (263)
T ss_pred             cCCCCEEEEECCCChHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcC-CcEEEEEccCCCHHHHHHHHHHHHHHc
Confidence            5789999999999999999999999999999999999887777777776544 378889999999999999999999999


Q ss_pred             CCccEEEEccccCCcccccccCChHHHHHHHHhhhHHHHHHHHHHhhhhhh--cCCeEEEEcCccccccCCCCccchHHH
Q 044010          124 GRLDHLVNNAGISSVALFEDIVNITDFKQIMNINFWGSVYTTRFAVPHLRY--TKGKIVVLSSAASWLTAPRMSFYNASK  201 (248)
Q Consensus       124 g~id~vv~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~--~~g~iV~isS~~~~~~~~~~~~Y~~sK  201 (248)
                      +++|++|||||.....+..+ .+.+++++.+++|+.+++.+.+++.+.|.+  ..|++|++||..+..+.++...|+++|
T Consensus        86 ~~id~vi~~Ag~~~~~~~~~-~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~g~iv~~sS~~~~~~~~~~~~Y~~sK  164 (263)
T PRK07814         86 GRLDIVVNNVGGTMPNPLLS-TSTKDLADAFTFNVATAHALTVAAVPLMLEHSGGGSVINISSTMGRLAGRGFAAYGTAK  164 (263)
T ss_pred             CCCCEEEECCCCCCCCChhh-CCHHHHHHHHHhhcHHHHHHHHHHHHHHHhhcCCeEEEEEccccccCCCCCCchhHHHH
Confidence            99999999999866555554 477999999999999999999999999864  348999999999988889999999999


Q ss_pred             HHHHHHHHHHHHHhCCCeEEEEEecCccccCcccc
Q 044010          202 AALVLFFETLRVELGSDVGVTIVTPGFIESELTQG  236 (248)
Q Consensus       202 aal~~l~~~la~~~~~~i~v~~v~pg~v~T~~~~~  236 (248)
                      +++++++++++.++.++++||+|+||+++|++...
T Consensus       165 ~a~~~~~~~~~~e~~~~i~v~~i~Pg~v~t~~~~~  199 (263)
T PRK07814        165 AALAHYTRLAALDLCPRIRVNAIAPGSILTSALEV  199 (263)
T ss_pred             HHHHHHHHHHHHHHCCCceEEEEEeCCCcCchhhh
Confidence            99999999999999878999999999999998653

>PRK07792 fabG 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional

Probab=100.00  E-value=1.9e-33  Score=243.23  Aligned_cols=193  Identities=27%  Similarity=0.402  Sum_probs=169.0

Q ss_pred             cccCCCCCEEEEcCCCChHHHHHHHHHHHcCCeEEEEeCCc-chHHHHHHHHHhhCCCcEEEEEccCCCHHHHHHHHHHH
Q 044010           41 FSEDVSGKVVIITGASSGIGEHLAYEYARRGACLALCARRE-KSLEEVADTAREIGSPDVITIRADVSKVDDCRSLVEET  119 (248)
Q Consensus        41 ~~~~~~~k~~lVtGg~~gIG~aia~~l~~~G~~V~l~~r~~-~~~~~~~~~l~~~~~~~v~~~~~D~~~~~~~~~~~~~~  119 (248)
                      +..+++||+++||||++|||+++|++|+++|++|++.+++. +..++..++++..+ .++.++.+|++|.++++++++++
T Consensus         6 ~~~~l~~k~~lVTGas~gIG~~ia~~L~~~Ga~Vv~~~~~~~~~~~~~~~~i~~~g-~~~~~~~~Dv~d~~~~~~~~~~~   84 (306)
T PRK07792          6 NTTDLSGKVAVVTGAAAGLGRAEALGLARLGATVVVNDVASALDASDVLDEIRAAG-AKAVAVAGDISQRATADELVATA   84 (306)
T ss_pred             CCcCCCCCEEEEECCCChHHHHHHHHHHHCCCEEEEecCCchhHHHHHHHHHHhcC-CeEEEEeCCCCCHHHHHHHHHHH
Confidence            34578999999999999999999999999999999998854 45666677776654 37889999999999999999999


Q ss_pred             HhHcCCccEEEEccccCCcccccccCChHHHHHHHHhhhHHHHHHHHHHhhhhhhc--------CCeEEEEcCccccccC
Q 044010          120 MNHFGRLDHLVNNAGISSVALFEDIVNITDFKQIMNINFWGSVYTTRFAVPHLRYT--------KGKIVVLSSAASWLTA  191 (248)
Q Consensus       120 ~~~~g~id~vv~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~--------~g~iV~isS~~~~~~~  191 (248)
                      .+ +|++|++|||||......+.+ .+.++|++.+++|+.+++.+++++.++|.+.        .|+||++||..+..+.
T Consensus        85 ~~-~g~iD~li~nAG~~~~~~~~~-~~~~~~~~~~~vn~~g~~~l~~~~~~~~~~~~~~~~~~~~g~iv~isS~~~~~~~  162 (306)
T PRK07792         85 VG-LGGLDIVVNNAGITRDRMLFN-MSDEEWDAVIAVHLRGHFLLTRNAAAYWRAKAKAAGGPVYGRIVNTSSEAGLVGP  162 (306)
T ss_pred             HH-hCCCCEEEECCCCCCCCCccc-CCHHHHHHHHHHhhhHHHHHHHHHHHHHHHhhcccCCCCCcEEEEECCcccccCC
Confidence            88 999999999999876655554 4679999999999999999999999988632        2799999999998888


Q ss_pred             CCCccchHHHHHHHHHHHHHHHHhCC-CeEEEEEecCccccCccccc
Q 044010          192 PRMSFYNASKAALVLFFETLRVELGS-DVGVTIVTPGFIESELTQGK  237 (248)
Q Consensus       192 ~~~~~Y~~sKaal~~l~~~la~~~~~-~i~v~~v~pg~v~T~~~~~~  237 (248)
                      ++.+.|++||+++++++++++.|+++ +|+||+|+|| ..|+|....
T Consensus       163 ~~~~~Y~asKaal~~l~~~la~e~~~~gI~vn~i~Pg-~~t~~~~~~  208 (306)
T PRK07792        163 VGQANYGAAKAGITALTLSAARALGRYGVRANAICPR-ARTAMTADV  208 (306)
T ss_pred             CCCchHHHHHHHHHHHHHHHHHHhhhcCeEEEEECCC-CCCchhhhh
Confidence            88999999999999999999999977 5999999999 489887544

>PRK05855 short chain dehydrogenase; Validated

Probab=100.00  E-value=1.3e-33  Score=262.72  Aligned_cols=193  Identities=33%  Similarity=0.534  Sum_probs=176.5

Q ss_pred             cCCCCCEEEEcCCCChHHHHHHHHHHHcCCeEEEEeCCcchHHHHHHHHHhhCCCcEEEEEccCCCHHHHHHHHHHHHhH
Q 044010           43 EDVSGKVVIITGASSGIGEHLAYEYARRGACLALCARREKSLEEVADTAREIGSPDVITIRADVSKVDDCRSLVEETMNH  122 (248)
Q Consensus        43 ~~~~~k~~lVtGg~~gIG~aia~~l~~~G~~V~l~~r~~~~~~~~~~~l~~~~~~~v~~~~~D~~~~~~~~~~~~~~~~~  122 (248)
                      ..++++++|||||++|||.+++++|+++|++|++++|+.++.++..+++++.+. ++.++.+|++|.++++++++++.++
T Consensus       311 ~~~~~~~~lv~G~s~giG~~~a~~l~~~G~~v~~~~r~~~~~~~~~~~~~~~~~-~~~~~~~Dv~~~~~~~~~~~~~~~~  389 (582)
T PRK05855        311 GPFSGKLVVVTGAGSGIGRETALAFAREGAEVVASDIDEAAAERTAELIRAAGA-VAHAYRVDVSDADAMEAFAEWVRAE  389 (582)
T ss_pred             ccCCCCEEEEECCcCHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcCC-eEEEEEcCCCCHHHHHHHHHHHHHh
Confidence            467889999999999999999999999999999999999888888887876654 7889999999999999999999999


Q ss_pred             cCCccEEEEccccCCcccccccCChHHHHHHHHhhhHHHHHHHHHHhhhhhhcC--CeEEEEcCccccccCCCCccchHH
Q 044010          123 FGRLDHLVNNAGISSVALFEDIVNITDFKQIMNINFWGSVYTTRFAVPHLRYTK--GKIVVLSSAASWLTAPRMSFYNAS  200 (248)
Q Consensus       123 ~g~id~vv~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~--g~iV~isS~~~~~~~~~~~~Y~~s  200 (248)
                      +|++|++|||||........+ .+.+++++++++|+.|++++++.+.|.|.+++  |+||++||.++..+.++...|++|
T Consensus       390 ~g~id~lv~~Ag~~~~~~~~~-~~~~~~~~~~~~n~~g~~~~~~~~~~~~~~~~~~g~iv~~sS~~~~~~~~~~~~Y~~s  468 (582)
T PRK05855        390 HGVPDIVVNNAGIGMAGGFLD-TSAEDWDRVLDVNLWGVIHGCRLFGRQMVERGTGGHIVNVASAAAYAPSRSLPAYATS  468 (582)
T ss_pred             cCCCcEEEECCccCCCCCccc-CCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcCCCcEEEEECChhhccCCCCCcHHHHH
Confidence            999999999999876665555 57799999999999999999999999987553  899999999999999999999999


Q ss_pred             HHHHHHHHHHHHHHhCC-CeEEEEEecCccccCccccc
Q 044010          201 KAALVLFFETLRVELGS-DVGVTIVTPGFIESELTQGK  237 (248)
Q Consensus       201 Kaal~~l~~~la~~~~~-~i~v~~v~pg~v~T~~~~~~  237 (248)
                      |+++++++++++.|+.+ +|+|++|+||+|+|+|.+..
T Consensus       469 Kaa~~~~~~~l~~e~~~~gi~v~~v~Pg~v~t~~~~~~  506 (582)
T PRK05855        469 KAAVLMLSECLRAELAAAGIGVTAICPGFVDTNIVATT  506 (582)
T ss_pred             HHHHHHHHHHHHHHhcccCcEEEEEEeCCCcccchhcc
Confidence            99999999999999987 59999999999999987754

>PF13561 adh_short_C2: Enoyl-(Acyl carrier protein) reductase; PDB: 2UV8_B 3HMJ_A 2VKZ_C 1O5I_A 2P91_C 2OP0_A 2OL4_B 1NHW_A 1NNU_B 2O2Y_B

Probab=100.00  E-value=2.9e-34  Score=239.98  Aligned_cols=180  Identities=34%  Similarity=0.504  Sum_probs=163.0

Q ss_pred             CCC--ChHHHHHHHHHHHcCCeEEEEeCCcchHHHHHHHHHhhCCCcEEEEEccCCCHHHHHHHHHHHHhHc-CCccEEE
Q 044010           54 GAS--SGIGEHLAYEYARRGACLALCARREKSLEEVADTAREIGSPDVITIRADVSKVDDCRSLVEETMNHF-GRLDHLV  130 (248)
Q Consensus        54 Gg~--~gIG~aia~~l~~~G~~V~l~~r~~~~~~~~~~~l~~~~~~~v~~~~~D~~~~~~~~~~~~~~~~~~-g~id~vv  130 (248)
                      |++  +|||+++|++|+++|++|++++|+.++.++..+++.+..+.+  ++.+|++++++++++++++.+.+ |++|++|
T Consensus         1 g~~~s~GiG~aia~~l~~~Ga~V~~~~~~~~~~~~~~~~l~~~~~~~--~~~~D~~~~~~v~~~~~~~~~~~~g~iD~lV   78 (241)
T PF13561_consen    1 GAGSSSGIGRAIARALAEEGANVILTDRNEEKLADALEELAKEYGAE--VIQCDLSDEESVEALFDEAVERFGGRIDILV   78 (241)
T ss_dssp             STSSTSHHHHHHHHHHHHTTEEEEEEESSHHHHHHHHHHHHHHTTSE--EEESCTTSHHHHHHHHHHHHHHHCSSESEEE
T ss_pred             CCCCCCChHHHHHHHHHHCCCEEEEEeCChHHHHHHHHHHHHHcCCc--eEeecCcchHHHHHHHHHHHhhcCCCeEEEE
Confidence            566  999999999999999999999999998877788887766544  59999999999999999999999 9999999


Q ss_pred             EccccCCc----ccccccCChHHHHHHHHhhhHHHHHHHHHHhhhhhhcCCeEEEEcCccccccCCCCccchHHHHHHHH
Q 044010          131 NNAGISSV----ALFEDIVNITDFKQIMNINFWGSVYTTRFAVPHLRYTKGKIVVLSSAASWLTAPRMSFYNASKAALVL  206 (248)
Q Consensus       131 ~~ag~~~~----~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~g~iV~isS~~~~~~~~~~~~Y~~sKaal~~  206 (248)
                      ||+|...+    .++.+ .+.++|++.+++|+.+++.++|++.|.|+ +.|+||++||..+..+.+++..|+++|+|+++
T Consensus        79 ~~a~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~gsii~iss~~~~~~~~~~~~y~~sKaal~~  156 (241)
T PF13561_consen   79 NNAGISPPSNVEKPLLD-LSEEDWDKTFDINVFSPFLLAQAALPLMK-KGGSIINISSIAAQRPMPGYSAYSASKAALEG  156 (241)
T ss_dssp             EEEESCTGGGTSSSGGG-SHHHHHHHHHHHHTHHHHHHHHHHHHHHH-HEEEEEEEEEGGGTSBSTTTHHHHHHHHHHHH
T ss_pred             ecccccccccCCCChHh-CCHHHHHHHHHHHHHHHHHHHHHHHHHHh-hCCCcccccchhhcccCccchhhHHHHHHHHH
Confidence            99998775    44444 57899999999999999999999999876 45899999999999999999999999999999


Q ss_pred             HHHHHHHHhCC-C-eEEEEEecCccccCccccc
Q 044010          207 FFETLRVELGS-D-VGVTIVTPGFIESELTQGK  237 (248)
Q Consensus       207 l~~~la~~~~~-~-i~v~~v~pg~v~T~~~~~~  237 (248)
                      +++++|.|+++ + ||||+|+||+++|++.+..
T Consensus       157 l~r~lA~el~~~~gIrVN~V~pG~i~t~~~~~~  189 (241)
T PF13561_consen  157 LTRSLAKELAPKKGIRVNAVSPGPIETPMTERI  189 (241)
T ss_dssp             HHHHHHHHHGGHGTEEEEEEEESSBSSHHHHHH
T ss_pred             HHHHHHHHhccccCeeeeeecccceeccchhcc
Confidence            99999999998 5 9999999999999986654

...

>TIGR01500 sepiapter_red sepiapterin reductase

Probab=100.00  E-value=1.7e-33  Score=237.33  Aligned_cols=188  Identities=24%  Similarity=0.329  Sum_probs=163.6

Q ss_pred             EEEEcCCCChHHHHHHHHHHH----cCCeEEEEeCCcchHHHHHHHHHhh-CCCcEEEEEccCCCHHHHHHHHHHHHhHc
Q 044010           49 VVIITGASSGIGEHLAYEYAR----RGACLALCARREKSLEEVADTAREI-GSPDVITIRADVSKVDDCRSLVEETMNHF  123 (248)
Q Consensus        49 ~~lVtGg~~gIG~aia~~l~~----~G~~V~l~~r~~~~~~~~~~~l~~~-~~~~v~~~~~D~~~~~~~~~~~~~~~~~~  123 (248)
                      +++||||++|||+++|++|++    +|++|++++|+.+.+++..+++++. .+.++.++.+|++|.++++++++++.+.+
T Consensus         2 ~vlItGas~GIG~~~a~~la~~~~~~g~~V~~~~r~~~~~~~~~~~l~~~~~~~~v~~~~~Dl~~~~~v~~~~~~~~~~~   81 (256)
T TIGR01500         2 VCLVTGASRGFGRTIAQELAKCLKSPGSVLVLSARNDEALRQLKAEIGAERSGLRVVRVSLDLGAEAGLEQLLKALRELP   81 (256)
T ss_pred             EEEEecCCCchHHHHHHHHHHhhccCCcEEEEEEcCHHHHHHHHHHHHhcCCCceEEEEEeccCCHHHHHHHHHHHHhcc
Confidence            689999999999999999997    7999999999998888888888763 23468899999999999999999998877


Q ss_pred             CCc----cEEEEccccCCcc-c-ccccCChHHHHHHHHhhhHHHHHHHHHHhhhhhhc---CCeEEEEcCccccccCCCC
Q 044010          124 GRL----DHLVNNAGISSVA-L-FEDIVNITDFKQIMNINFWGSVYTTRFAVPHLRYT---KGKIVVLSSAASWLTAPRM  194 (248)
Q Consensus       124 g~i----d~vv~~ag~~~~~-~-~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~---~g~iV~isS~~~~~~~~~~  194 (248)
                      |.+    |++|||||..... . ..+..+.++|++.+++|+.+++.+++.++|.|.++   .|+||++||..+..+.++.
T Consensus        82 g~~~~~~~~lv~nAG~~~~~~~~~~~~~~~~~~~~~~~vN~~~~~~~~~~~~~~l~~~~~~~~~iv~isS~~~~~~~~~~  161 (256)
T TIGR01500        82 RPKGLQRLLLINNAGTLGDVSKGFVDLSDSTQVQNYWALNLTSMLCLTSSVLKAFKDSPGLNRTVVNISSLCAIQPFKGW  161 (256)
T ss_pred             ccCCCceEEEEeCCcccCccccccccCCCHHHHHHHHHhhhHHHHHHHHHHHHHHhhcCCCCCEEEEECCHHhCCCCCCc
Confidence            643    6999999975432 2 22223568999999999999999999999998754   3799999999999998999


Q ss_pred             ccchHHHHHHHHHHHHHHHHhCCC-eEEEEEecCccccCcccc
Q 044010          195 SFYNASKAALVLFFETLRVELGSD-VGVTIVTPGFIESELTQG  236 (248)
Q Consensus       195 ~~Y~~sKaal~~l~~~la~~~~~~-i~v~~v~pg~v~T~~~~~  236 (248)
                      .+|++||+|+++|+++++.|+++. |+||+|+||+++|+|.+.
T Consensus       162 ~~Y~asKaal~~l~~~la~e~~~~~i~v~~v~PG~v~T~~~~~  204 (256)
T TIGR01500       162 ALYCAGKAARDMLFQVLALEEKNPNVRVLNYAPGVLDTDMQQQ  204 (256)
T ss_pred             hHHHHHHHHHHHHHHHHHHHhcCCCeEEEEecCCcccchHHHH
Confidence            999999999999999999999874 999999999999999764

This model describes sepiapterin reductase, a member of the short chain dehydrogenase/reductase family. The enzyme catalyzes the last step in the biosynthesis of tetrahydrobiopterin. A similar enzyme in Bacillus cereus was isolated for its ability to convert benzil to (S)-benzoin, a property sepiapterin reductase also shares. Cutoff scores for this model are set such that benzil reductase scores between trusted and noise cutoffs.

>PRK06300 enoyl-(acyl carrier protein) reductase; Provisional

Probab=100.00  E-value=4.2e-34  Score=245.86  Aligned_cols=192  Identities=19%  Similarity=0.233  Sum_probs=150.9

Q ss_pred             ccCCCCCEEEEcCCC--ChHHHHHHHHHHHcCCeEEEEeCCcchHHHHHHHHH---------hhCCC-----cEEEEEcc
Q 044010           42 SEDVSGKVVIITGAS--SGIGEHLAYEYARRGACLALCARREKSLEEVADTAR---------EIGSP-----DVITIRAD  105 (248)
Q Consensus        42 ~~~~~~k~~lVtGg~--~gIG~aia~~l~~~G~~V~l~~r~~~~~~~~~~~l~---------~~~~~-----~v~~~~~D  105 (248)
                      ..+++||+++|||++  +|||+++|+.|+++|++|++.++.+ .++...+...         ...+.     ++..+.+|
T Consensus         3 ~~~~~gk~alITGa~~~~GIG~a~A~~la~~Ga~Vvv~~~~~-~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~d   81 (299)
T PRK06300          3 KIDLTGKIAFIAGIGDDQGYGWGIAKALAEAGATILVGTWVP-IYKIFSQSLELGKFDASRKLSNGSLLTFAKIYPMDAS   81 (299)
T ss_pred             CcCCCCCEEEEeCCCCCCCHHHHHHHHHHHCCCEEEEEeccc-hhhhhhhhcccccccccccccccchhhhhhHHHhhhh
Confidence            457899999999996  9999999999999999999987642 1111100000         00000     01112233


Q ss_pred             CCCH------------------HHHHHHHHHHHhHcCCccEEEEccccCC--cccccccCChHHHHHHHHhhhHHHHHHH
Q 044010          106 VSKV------------------DDCRSLVEETMNHFGRLDHLVNNAGISS--VALFEDIVNITDFKQIMNINFWGSVYTT  165 (248)
Q Consensus       106 ~~~~------------------~~~~~~~~~~~~~~g~id~vv~~ag~~~--~~~~~~~~~~~~~~~~~~~n~~~~~~l~  165 (248)
                      +++.                  ++++++++++.+++|++|++|||||...  ..++.+ .+.++|++.+++|+.|+++++
T Consensus        82 ~~~~~~v~~~i~~~~~~~~~~~~si~~~~~~v~~~~G~lDvLVnNAG~~~~~~~~~~~-~~~e~~~~~~~vNl~g~~~l~  160 (299)
T PRK06300         82 FDTPEDVPEEIRENKRYKDLSGYTISEVAEQVKKDFGHIDILVHSLANSPEISKPLLE-TSRKGYLAALSTSSYSFVSLL  160 (299)
T ss_pred             cCCCEEeecccCccccccCCCHHHHHHHHHHHHHHcCCCcEEEECCCcCcccCCChhh-CCHHHHHHHHHHHhHHHHHHH
Confidence            3333                  4689999999999999999999999753  344444 578999999999999999999


Q ss_pred             HHHhhhhhhcCCeEEEEcCccccccCCCCc-cchHHHHHHHHHHHHHHHHhCC--CeEEEEEecCccccCcccc
Q 044010          166 RFAVPHLRYTKGKIVVLSSAASWLTAPRMS-FYNASKAALVLFFETLRVELGS--DVGVTIVTPGFIESELTQG  236 (248)
Q Consensus       166 ~~~~~~~~~~~g~iV~isS~~~~~~~~~~~-~Y~~sKaal~~l~~~la~~~~~--~i~v~~v~pg~v~T~~~~~  236 (248)
                      ++++|.|+ ++|+||++||..+..+.+++. .|++||+|+++|+++++.|+++  +||||+|+||+++|++...
T Consensus       161 ~a~~p~m~-~~G~ii~iss~~~~~~~p~~~~~Y~asKaAl~~lt~~la~el~~~~gIrVn~V~PG~v~T~~~~~  233 (299)
T PRK06300        161 SHFGPIMN-PGGSTISLTYLASMRAVPGYGGGMSSAKAALESDTKVLAWEAGRRWGIRVNTISAGPLASRAGKA  233 (299)
T ss_pred             HHHHHHhh-cCCeEEEEeehhhcCcCCCccHHHHHHHHHHHHHHHHHHHHhCCCCCeEEEEEEeCCccChhhhc
Confidence            99999996 468999999999888888775 8999999999999999999974  5999999999999998753

>PRK07067 sorbitol dehydrogenase; Provisional

Probab=100.00  E-value=3.6e-33  Score=235.22  Aligned_cols=189  Identities=26%  Similarity=0.433  Sum_probs=167.8

Q ss_pred             cCCCCCEEEEcCCCChHHHHHHHHHHHcCCeEEEEeCCcchHHHHHHHHHhhCCCcEEEEEccCCCHHHHHHHHHHHHhH
Q 044010           43 EDVSGKVVIITGASSGIGEHLAYEYARRGACLALCARREKSLEEVADTAREIGSPDVITIRADVSKVDDCRSLVEETMNH  122 (248)
Q Consensus        43 ~~~~~k~~lVtGg~~gIG~aia~~l~~~G~~V~l~~r~~~~~~~~~~~l~~~~~~~v~~~~~D~~~~~~~~~~~~~~~~~  122 (248)
                      +.+++|+++||||++|||.++|++|+++|++|++++|+.++.++..+.+.    .++.++.+|++|.++++++++++.++
T Consensus         2 ~~l~~~~vlItGas~~iG~~ia~~l~~~G~~v~~~~r~~~~~~~~~~~~~----~~~~~~~~D~~~~~~~~~~~~~~~~~   77 (257)
T PRK07067          2 MRLQGKVALLTGAASGIGEAVAERYLAEGARVVIADIKPARARLAALEIG----PAAIAVSLDVTRQDSIDRIVAAAVER   77 (257)
T ss_pred             CCCCCCEEEEeCCCchHHHHHHHHHHHcCCEEEEEcCCHHHHHHHHHHhC----CceEEEEccCCCHHHHHHHHHHHHHH
Confidence            35789999999999999999999999999999999999877666554442    35788999999999999999999999


Q ss_pred             cCCccEEEEccccCCcccccccCChHHHHHHHHhhhHHHHHHHHHHhhhhhhc--CCeEEEEcCccccccCCCCccchHH
Q 044010          123 FGRLDHLVNNAGISSVALFEDIVNITDFKQIMNINFWGSVYTTRFAVPHLRYT--KGKIVVLSSAASWLTAPRMSFYNAS  200 (248)
Q Consensus       123 ~g~id~vv~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~--~g~iV~isS~~~~~~~~~~~~Y~~s  200 (248)
                      ++++|++|||||.....+..+ .+.+++++.+++|+.+++.+++.+.+.|.++  +|+||++||..+..+.++..+|++|
T Consensus        78 ~~~id~li~~ag~~~~~~~~~-~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~iv~~sS~~~~~~~~~~~~Y~~s  156 (257)
T PRK07067         78 FGGIDILFNNAALFDMAPILD-ISRDSYDRLFAVNVKGLFFLMQAVARHMVEQGRGGKIINMASQAGRRGEALVSHYCAT  156 (257)
T ss_pred             cCCCCEEEECCCcCCCCCccc-CCHHHHHHHHHhhhhhHHHHHHHHHHHHHhcCCCcEEEEeCCHHhCCCCCCCchhhhh
Confidence            999999999999876555444 4779999999999999999999999988643  4799999999888888899999999


Q ss_pred             HHHHHHHHHHHHHHhCCC-eEEEEEecCccccCcccc
Q 044010          201 KAALVLFFETLRVELGSD-VGVTIVTPGFIESELTQG  236 (248)
Q Consensus       201 Kaal~~l~~~la~~~~~~-i~v~~v~pg~v~T~~~~~  236 (248)
                      |+++++++++++.++++. |+||+|.||+++|++.+.
T Consensus       157 K~a~~~~~~~la~e~~~~gi~v~~i~pg~v~t~~~~~  193 (257)
T PRK07067        157 KAAVISYTQSAALALIRHGINVNAIAPGVVDTPMWDQ  193 (257)
T ss_pred             HHHHHHHHHHHHHHhcccCeEEEEEeeCcccchhhhh
Confidence            999999999999999874 999999999999998653

>PRK12743 oxidoreductase; Provisional

Probab=100.00  E-value=4.9e-33  Score=234.47  Aligned_cols=189  Identities=26%  Similarity=0.408  Sum_probs=167.0

Q ss_pred             CCCEEEEcCCCChHHHHHHHHHHHcCCeEEEEeC-CcchHHHHHHHHHhhCCCcEEEEEccCCCHHHHHHHHHHHHhHcC
Q 044010           46 SGKVVIITGASSGIGEHLAYEYARRGACLALCAR-REKSLEEVADTAREIGSPDVITIRADVSKVDDCRSLVEETMNHFG  124 (248)
Q Consensus        46 ~~k~~lVtGg~~gIG~aia~~l~~~G~~V~l~~r-~~~~~~~~~~~l~~~~~~~v~~~~~D~~~~~~~~~~~~~~~~~~g  124 (248)
                      .+|+++||||++|||++++++|+++|++|+++.+ +.+..+...++++..+ .++.++.+|+++.++++++++++.++++
T Consensus         1 ~~k~vlItGas~giG~~~a~~l~~~G~~V~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~Dl~~~~~~~~~~~~~~~~~~   79 (256)
T PRK12743          1 MAQVAIVTASDSGIGKACALLLAQQGFDIGITWHSDEEGAKETAEEVRSHG-VRAEIRQLDLSDLPEGAQALDKLIQRLG   79 (256)
T ss_pred             CCCEEEEECCCchHHHHHHHHHHHCCCEEEEEeCCChHHHHHHHHHHHhcC-CceEEEEccCCCHHHHHHHHHHHHHHcC
Confidence            3689999999999999999999999999988865 5555666666666554 3788999999999999999999999999


Q ss_pred             CccEEEEccccCCcccccccCChHHHHHHHHhhhHHHHHHHHHHhhhhhhc--CCeEEEEcCccccccCCCCccchHHHH
Q 044010          125 RLDHLVNNAGISSVALFEDIVNITDFKQIMNINFWGSVYTTRFAVPHLRYT--KGKIVVLSSAASWLTAPRMSFYNASKA  202 (248)
Q Consensus       125 ~id~vv~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~--~g~iV~isS~~~~~~~~~~~~Y~~sKa  202 (248)
                      ++|++|||+|........+ .+.++|++.+++|+.+++.+++++.+.|.++  +|+||++||..+..+.++...|+++|+
T Consensus        80 ~id~li~~ag~~~~~~~~~-~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~~g~ii~isS~~~~~~~~~~~~Y~~sK~  158 (256)
T PRK12743         80 RIDVLVNNAGAMTKAPFLD-MDFDEWRKIFTVDVDGAFLCSQIAARHMVKQGQGGRIINITSVHEHTPLPGASAYTAAKH  158 (256)
T ss_pred             CCCEEEECCCCCCCCChhh-CCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcCCCeEEEEEeeccccCCCCCcchhHHHHH
Confidence            9999999999876554444 5789999999999999999999999998643  489999999999889889999999999


Q ss_pred             HHHHHHHHHHHHhCC-CeEEEEEecCccccCcccc
Q 044010          203 ALVLFFETLRVELGS-DVGVTIVTPGFIESELTQG  236 (248)
Q Consensus       203 al~~l~~~la~~~~~-~i~v~~v~pg~v~T~~~~~  236 (248)
                      ++++++++++.++.+ +||||+|+||+++|++...
T Consensus       159 a~~~l~~~la~~~~~~~i~v~~v~Pg~~~t~~~~~  193 (256)
T PRK12743        159 ALGGLTKAMALELVEHGILVNAVAPGAIATPMNGM  193 (256)
T ss_pred             HHHHHHHHHHHHhhhhCeEEEEEEeCCccCccccc
Confidence            999999999999987 4999999999999998754

>PRK08226 short chain dehydrogenase; Provisional

Probab=100.00  E-value=4.1e-33  Score=235.55  Aligned_cols=191  Identities=30%  Similarity=0.472  Sum_probs=166.2

Q ss_pred             CCCCCEEEEcCCCChHHHHHHHHHHHcCCeEEEEeCCcchHHHHHHHHHhhCCCcEEEEEccCCCHHHHHHHHHHHHhHc
Q 044010           44 DVSGKVVIITGASSGIGEHLAYEYARRGACLALCARREKSLEEVADTAREIGSPDVITIRADVSKVDDCRSLVEETMNHF  123 (248)
Q Consensus        44 ~~~~k~~lVtGg~~gIG~aia~~l~~~G~~V~l~~r~~~~~~~~~~~l~~~~~~~v~~~~~D~~~~~~~~~~~~~~~~~~  123 (248)
                      ++++|+++||||++|||++++++|+++|++|++++|+.+ .++..+++.+.+ .++.++.+|+++.++++++++++.+.+
T Consensus         3 ~~~~~~~lItG~s~giG~~la~~l~~~G~~Vv~~~r~~~-~~~~~~~~~~~~-~~~~~~~~Dl~~~~~v~~~~~~~~~~~   80 (263)
T PRK08226          3 KLTGKTALITGALQGIGEGIARVFARHGANLILLDISPE-IEKLADELCGRG-HRCTAVVADVRDPASVAAAIKRAKEKE   80 (263)
T ss_pred             CCCCCEEEEeCCCChHHHHHHHHHHHCCCEEEEecCCHH-HHHHHHHHHHhC-CceEEEECCCCCHHHHHHHHHHHHHHc
Confidence            678999999999999999999999999999999999864 344445554433 367889999999999999999999999


Q ss_pred             CCccEEEEccccCCcccccccCChHHHHHHHHhhhHHHHHHHHHHhhhhhhc-CCeEEEEcCccc-cccCCCCccchHHH
Q 044010          124 GRLDHLVNNAGISSVALFEDIVNITDFKQIMNINFWGSVYTTRFAVPHLRYT-KGKIVVLSSAAS-WLTAPRMSFYNASK  201 (248)
Q Consensus       124 g~id~vv~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~-~g~iV~isS~~~-~~~~~~~~~Y~~sK  201 (248)
                      +++|++|||||.....+..+ .+.+++++.+++|+.+++.+++.+.+.+.+. .+++|++||..+ ..+.+++..|+++|
T Consensus        81 ~~id~vi~~ag~~~~~~~~~-~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~~iv~isS~~~~~~~~~~~~~Y~~sK  159 (263)
T PRK08226         81 GRIDILVNNAGVCRLGSFLD-MSDEDRDFHIDINIKGVWNVTKAVLPEMIARKDGRIVMMSSVTGDMVADPGETAYALTK  159 (263)
T ss_pred             CCCCEEEECCCcCCCCCccc-CCHHHHHHHHhhhhHHHHHHHHHHHHHHHhcCCcEEEEECcHHhcccCCCCcchHHHHH
Confidence            99999999999876655555 4678999999999999999999999988644 489999999887 45667788999999


Q ss_pred             HHHHHHHHHHHHHhCC-CeEEEEEecCccccCccccc
Q 044010          202 AALVLFFETLRVELGS-DVGVTIVTPGFIESELTQGK  237 (248)
Q Consensus       202 aal~~l~~~la~~~~~-~i~v~~v~pg~v~T~~~~~~  237 (248)
                      +++++++++++.++++ +|+||+|+||+++|+|.+..
T Consensus       160 ~a~~~~~~~la~~~~~~~i~v~~i~pg~v~t~~~~~~  196 (263)
T PRK08226        160 AAIVGLTKSLAVEYAQSGIRVNAICPGYVRTPMAESI  196 (263)
T ss_pred             HHHHHHHHHHHHHhcccCcEEEEEecCcccCHHHHhh
Confidence            9999999999999987 49999999999999987654

>PRK07576 short chain dehydrogenase; Provisional

Probab=100.00  E-value=4.4e-33  Score=236.00  Aligned_cols=190  Identities=26%  Similarity=0.427  Sum_probs=169.4

Q ss_pred             ccCCCCCEEEEcCCCChHHHHHHHHHHHcCCeEEEEeCCcchHHHHHHHHHhhCCCcEEEEEccCCCHHHHHHHHHHHHh
Q 044010           42 SEDVSGKVVIITGASSGIGEHLAYEYARRGACLALCARREKSLEEVADTAREIGSPDVITIRADVSKVDDCRSLVEETMN  121 (248)
Q Consensus        42 ~~~~~~k~~lVtGg~~gIG~aia~~l~~~G~~V~l~~r~~~~~~~~~~~l~~~~~~~v~~~~~D~~~~~~~~~~~~~~~~  121 (248)
                      .+++++|+++||||++|||.+++++|+++|++|++++|+.++.++..+++.+.+. ++.++.+|++++++++++++++.+
T Consensus         4 ~~~~~~k~ilItGasggIG~~la~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~-~~~~~~~Dv~~~~~i~~~~~~~~~   82 (264)
T PRK07576          4 MFDFAGKNVVVVGGTSGINLGIAQAFARAGANVAVASRSQEKVDAAVAQLQQAGP-EGLGVSADVRDYAAVEAAFAQIAD   82 (264)
T ss_pred             cccCCCCEEEEECCCchHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHHhCC-ceEEEECCCCCHHHHHHHHHHHHH
Confidence            3578999999999999999999999999999999999998877777666665543 678899999999999999999999


Q ss_pred             HcCCccEEEEccccCCcccccccCChHHHHHHHHhhhHHHHHHHHHHhhhhhhcCCeEEEEcCccccccCCCCccchHHH
Q 044010          122 HFGRLDHLVNNAGISSVALFEDIVNITDFKQIMNINFWGSVYTTRFAVPHLRYTKGKIVVLSSAASWLTAPRMSFYNASK  201 (248)
Q Consensus       122 ~~g~id~vv~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~g~iV~isS~~~~~~~~~~~~Y~~sK  201 (248)
                      .++++|++|||||.....+..+ .+.++|++.+++|+.+++.+++++.|.|++.+|+||++||..+..+.++...|+++|
T Consensus        83 ~~~~iD~vi~~ag~~~~~~~~~-~~~~~~~~~~~~n~~g~~~l~~~~~~~l~~~~g~iv~iss~~~~~~~~~~~~Y~asK  161 (264)
T PRK07576         83 EFGPIDVLVSGAAGNFPAPAAG-MSANGFKTVVDIDLLGTFNVLKAAYPLLRRPGASIIQISAPQAFVPMPMQAHVCAAK  161 (264)
T ss_pred             HcCCCCEEEECCCCCCCCcccc-CCHHHHHHHHHHHhHHHHHHHHHHHHHHHhCCCEEEEECChhhccCCCCccHHHHHH
Confidence            9999999999999765554444 577899999999999999999999999876678999999998888888899999999


Q ss_pred             HHHHHHHHHHHHHhCCC-eEEEEEecCccc-cCc
Q 044010          202 AALVLFFETLRVELGSD-VGVTIVTPGFIE-SEL  233 (248)
Q Consensus       202 aal~~l~~~la~~~~~~-i~v~~v~pg~v~-T~~  233 (248)
                      +++++++++++.++.++ |+|++|+||+++ |+.
T Consensus       162 ~a~~~l~~~la~e~~~~gi~v~~v~pg~~~~t~~  195 (264)
T PRK07576        162 AGVDMLTRTLALEWGPEGIRVNSIVPGPIAGTEG  195 (264)
T ss_pred             HHHHHHHHHHHHHhhhcCeEEEEEecccccCcHH
Confidence            99999999999999774 999999999997 553

>PRK05993 short chain dehydrogenase; Provisional

Probab=100.00  E-value=2.9e-33  Score=238.74  Aligned_cols=183  Identities=28%  Similarity=0.390  Sum_probs=162.9

Q ss_pred             CCCEEEEcCCCChHHHHHHHHHHHcCCeEEEEeCCcchHHHHHHHHHhhCCCcEEEEEccCCCHHHHHHHHHHHHhHc-C
Q 044010           46 SGKVVIITGASSGIGEHLAYEYARRGACLALCARREKSLEEVADTAREIGSPDVITIRADVSKVDDCRSLVEETMNHF-G  124 (248)
Q Consensus        46 ~~k~~lVtGg~~gIG~aia~~l~~~G~~V~l~~r~~~~~~~~~~~l~~~~~~~v~~~~~D~~~~~~~~~~~~~~~~~~-g  124 (248)
                      .+|+++||||++|||.+++++|+++|++|++++|+.++++...    +.   .+.++.+|++|.++++++++++.+.+ |
T Consensus         3 ~~k~vlItGasggiG~~la~~l~~~G~~Vi~~~r~~~~~~~l~----~~---~~~~~~~Dl~d~~~~~~~~~~~~~~~~g   75 (277)
T PRK05993          3 MKRSILITGCSSGIGAYCARALQSDGWRVFATCRKEEDVAALE----AE---GLEAFQLDYAEPESIAALVAQVLELSGG   75 (277)
T ss_pred             CCCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEECCHHHHHHHH----HC---CceEEEccCCCHHHHHHHHHHHHHHcCC
Confidence            3689999999999999999999999999999999876654432    21   46788999999999999999997765 6


Q ss_pred             CccEEEEccccCCcccccccCChHHHHHHHHhhhHHHHHHHHHHhhhhhhcC-CeEEEEcCccccccCCCCccchHHHHH
Q 044010          125 RLDHLVNNAGISSVALFEDIVNITDFKQIMNINFWGSVYTTRFAVPHLRYTK-GKIVVLSSAASWLTAPRMSFYNASKAA  203 (248)
Q Consensus       125 ~id~vv~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~-g~iV~isS~~~~~~~~~~~~Y~~sKaa  203 (248)
                      ++|++|||||...+....+ .+.+++++.+++|+.|++.+++.++|.|.+.+ |+||++||..+..+.+....|++||++
T Consensus        76 ~id~li~~Ag~~~~~~~~~-~~~~~~~~~~~~N~~g~~~~~~~~l~~~~~~~~g~iv~isS~~~~~~~~~~~~Y~asK~a  154 (277)
T PRK05993         76 RLDALFNNGAYGQPGAVED-LPTEALRAQFEANFFGWHDLTRRVIPVMRKQGQGRIVQCSSILGLVPMKYRGAYNASKFA  154 (277)
T ss_pred             CccEEEECCCcCCCCCccc-CCHHHHHHHHhHHhHHHHHHHHHHHHHHhhcCCCEEEEECChhhcCCCCccchHHHHHHH
Confidence            8999999999887666555 57799999999999999999999999997654 899999999999998999999999999


Q ss_pred             HHHHHHHHHHHhCC-CeEEEEEecCccccCcccc
Q 044010          204 LVLFFETLRVELGS-DVGVTIVTPGFIESELTQG  236 (248)
Q Consensus       204 l~~l~~~la~~~~~-~i~v~~v~pg~v~T~~~~~  236 (248)
                      +++++++++.|+.+ +|+|++|+||+++|++..+
T Consensus       155 ~~~~~~~l~~el~~~gi~v~~v~Pg~v~T~~~~~  188 (277)
T PRK05993        155 IEGLSLTLRMELQGSGIHVSLIEPGPIETRFRAN  188 (277)
T ss_pred             HHHHHHHHHHHhhhhCCEEEEEecCCccCchhhH
Confidence            99999999999987 4999999999999998764

>PRK06841 short chain dehydrogenase; Provisional

Probab=100.00  E-value=8e-33  Score=232.64  Aligned_cols=189  Identities=35%  Similarity=0.482  Sum_probs=165.7

Q ss_pred             CCCCCEEEEcCCCChHHHHHHHHHHHcCCeEEEEeCCcchHHHHHHHHHhhCCCcEEEEEccCCCHHHHHHHHHHHHhHc
Q 044010           44 DVSGKVVIITGASSGIGEHLAYEYARRGACLALCARREKSLEEVADTAREIGSPDVITIRADVSKVDDCRSLVEETMNHF  123 (248)
Q Consensus        44 ~~~~k~~lVtGg~~gIG~aia~~l~~~G~~V~l~~r~~~~~~~~~~~l~~~~~~~v~~~~~D~~~~~~~~~~~~~~~~~~  123 (248)
                      ++++|+++||||++|||.+++++|+++|++|++++|+.+.. +..+++   .+.++..+.+|+++.++++++++++.+.+
T Consensus        12 ~~~~k~vlItGas~~IG~~la~~l~~~G~~Vi~~~r~~~~~-~~~~~~---~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~   87 (255)
T PRK06841         12 DLSGKVAVVTGGASGIGHAIAELFAAKGARVALLDRSEDVA-EVAAQL---LGGNAKGLVCDVSDSQSVEAAVAAVISAF   87 (255)
T ss_pred             CCCCCEEEEECCCChHHHHHHHHHHHCCCEEEEEeCCHHHH-HHHHHh---hCCceEEEEecCCCHHHHHHHHHHHHHHh
Confidence            67899999999999999999999999999999999987532 222222   23357789999999999999999999999


Q ss_pred             CCccEEEEccccCCcccccccCChHHHHHHHHhhhHHHHHHHHHHhhhhhhc-CCeEEEEcCccccccCCCCccchHHHH
Q 044010          124 GRLDHLVNNAGISSVALFEDIVNITDFKQIMNINFWGSVYTTRFAVPHLRYT-KGKIVVLSSAASWLTAPRMSFYNASKA  202 (248)
Q Consensus       124 g~id~vv~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~-~g~iV~isS~~~~~~~~~~~~Y~~sKa  202 (248)
                      +++|++|||+|.....+..+ .+.+++++.+++|+.+++.+++.+.+.|.+. .++||++||..+..+.+...+|+++|+
T Consensus        88 ~~~d~vi~~ag~~~~~~~~~-~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~iv~~sS~~~~~~~~~~~~Y~~sK~  166 (255)
T PRK06841         88 GRIDILVNSAGVALLAPAED-VSEEDWDKTIDINLKGSFLMAQAVGRHMIAAGGGKIVNLASQAGVVALERHVAYCASKA  166 (255)
T ss_pred             CCCCEEEECCCCCCCCChhh-CCHHHHHHHHHHhcHHHHHHHHHHHHHHHhcCCceEEEEcchhhccCCCCCchHHHHHH
Confidence            99999999999876555444 4679999999999999999999999998754 489999999999889999999999999


Q ss_pred             HHHHHHHHHHHHhCC-CeEEEEEecCccccCccccc
Q 044010          203 ALVLFFETLRVELGS-DVGVTIVTPGFIESELTQGK  237 (248)
Q Consensus       203 al~~l~~~la~~~~~-~i~v~~v~pg~v~T~~~~~~  237 (248)
                      ++++++++++.++++ +|+||+|+||+++|++.+..
T Consensus       167 a~~~~~~~la~e~~~~gi~v~~v~pg~v~t~~~~~~  202 (255)
T PRK06841        167 GVVGMTKVLALEWGPYGITVNAISPTVVLTELGKKA  202 (255)
T ss_pred             HHHHHHHHHHHHHHhhCeEEEEEEeCcCcCcccccc
Confidence            999999999999987 49999999999999987643

>PRK07904 short chain dehydrogenase; Provisional

Probab=100.00  E-value=8.3e-33  Score=233.07  Aligned_cols=190  Identities=22%  Similarity=0.265  Sum_probs=164.7

Q ss_pred             CCCEEEEcCCCChHHHHHHHHHHHcC-CeEEEEeCCcch-HHHHHHHHHhhCCCcEEEEEccCCCHHHHHHHHHHHHhHc
Q 044010           46 SGKVVIITGASSGIGEHLAYEYARRG-ACLALCARREKS-LEEVADTAREIGSPDVITIRADVSKVDDCRSLVEETMNHF  123 (248)
Q Consensus        46 ~~k~~lVtGg~~gIG~aia~~l~~~G-~~V~l~~r~~~~-~~~~~~~l~~~~~~~v~~~~~D~~~~~~~~~~~~~~~~~~  123 (248)
                      .+|+++||||++|||+++|++|+++| ++|++++|+.++ +++..++++..+..+++++.+|++|.++++++++++.+ .
T Consensus         7 ~~~~vlItGas~giG~~la~~l~~~gg~~V~~~~r~~~~~~~~~~~~l~~~~~~~v~~~~~D~~~~~~~~~~~~~~~~-~   85 (253)
T PRK07904          7 NPQTILLLGGTSEIGLAICERYLKNAPARVVLAALPDDPRRDAAVAQMKAAGASSVEVIDFDALDTDSHPKVIDAAFA-G   85 (253)
T ss_pred             CCcEEEEEcCCcHHHHHHHHHHHhcCCCeEEEEeCCcchhHHHHHHHHHhcCCCceEEEEecCCChHHHHHHHHHHHh-c
Confidence            57899999999999999999999995 899999999886 78888888776544788999999999999999999876 5


Q ss_pred             CCccEEEEccccCCcccccccCChHHHHHHHHhhhHHHHHHHHHHhhhhhhc-CCeEEEEcCccccccCCCCccchHHHH
Q 044010          124 GRLDHLVNNAGISSVALFEDIVNITDFKQIMNINFWGSVYTTRFAVPHLRYT-KGKIVVLSSAASWLTAPRMSFYNASKA  202 (248)
Q Consensus       124 g~id~vv~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~-~g~iV~isS~~~~~~~~~~~~Y~~sKa  202 (248)
                      |++|++|||+|...+..... .+.++..+.+++|+.+++.+.+.++|.|.++ .|+||++||..+..+.++...|++||+
T Consensus        86 g~id~li~~ag~~~~~~~~~-~~~~~~~~~~~vN~~~~~~l~~~l~~~~~~~~~~~iv~isS~~g~~~~~~~~~Y~~sKa  164 (253)
T PRK07904         86 GDVDVAIVAFGLLGDAEELW-QNQRKAVQIAEINYTAAVSVGVLLGEKMRAQGFGQIIAMSSVAGERVRRSNFVYGSTKA  164 (253)
T ss_pred             CCCCEEEEeeecCCchhhcc-cCHHHHHHHHHHHhHhHHHHHHHHHHHHHhcCCceEEEEechhhcCCCCCCcchHHHHH
Confidence            89999999999864322111 2445667889999999999999999999755 489999999998888788889999999


Q ss_pred             HHHHHHHHHHHHhCC-CeEEEEEecCccccCccccc
Q 044010          203 ALVLFFETLRVELGS-DVGVTIVTPGFIESELTQGK  237 (248)
Q Consensus       203 al~~l~~~la~~~~~-~i~v~~v~pg~v~T~~~~~~  237 (248)
                      ++.+++++++.|+.+ +++|++|+||+++|++....
T Consensus       165 a~~~~~~~l~~el~~~~i~v~~v~Pg~v~t~~~~~~  200 (253)
T PRK07904        165 GLDGFYLGLGEALREYGVRVLVVRPGQVRTRMSAHA  200 (253)
T ss_pred             HHHHHHHHHHHHHhhcCCEEEEEeeCceecchhccC
Confidence            999999999999987 49999999999999988754

>PRK12938 acetyacetyl-CoA reductase; Provisional

Probab=100.00  E-value=1.1e-32  Score=230.70  Aligned_cols=190  Identities=22%  Similarity=0.364  Sum_probs=165.4

Q ss_pred             CCCCEEEEcCCCChHHHHHHHHHHHcCCeEEEE-eCCcchHHHHHHHHHhhCCCcEEEEEccCCCHHHHHHHHHHHHhHc
Q 044010           45 VSGKVVIITGASSGIGEHLAYEYARRGACLALC-ARREKSLEEVADTAREIGSPDVITIRADVSKVDDCRSLVEETMNHF  123 (248)
Q Consensus        45 ~~~k~~lVtGg~~gIG~aia~~l~~~G~~V~l~-~r~~~~~~~~~~~l~~~~~~~v~~~~~D~~~~~~~~~~~~~~~~~~  123 (248)
                      |++|+++||||++|||++++++|+++|++|++. +++.+..++..++++..+ .++..+.+|++|.++++++++++.+.+
T Consensus         1 ~~~k~~lVtG~s~giG~~~a~~l~~~G~~vv~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~D~~~~~~~~~~~~~~~~~~   79 (246)
T PRK12938          1 MSQRIAYVTGGMGGIGTSICQRLHKDGFKVVAGCGPNSPRRVKWLEDQKALG-FDFIASEGNVGDWDSTKAAFDKVKAEV   79 (246)
T ss_pred             CCCCEEEEECCCChHHHHHHHHHHHcCCEEEEEcCCChHHHHHHHHHHHhcC-CcEEEEEcCCCCHHHHHHHHHHHHHHh
Confidence            578999999999999999999999999998875 445555555555555444 367888999999999999999999999


Q ss_pred             CCccEEEEccccCCcccccccCChHHHHHHHHhhhHHHHHHHHHHhhhhhhcC-CeEEEEcCccccccCCCCccchHHHH
Q 044010          124 GRLDHLVNNAGISSVALFEDIVNITDFKQIMNINFWGSVYTTRFAVPHLRYTK-GKIVVLSSAASWLTAPRMSFYNASKA  202 (248)
Q Consensus       124 g~id~vv~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~-g~iV~isS~~~~~~~~~~~~Y~~sKa  202 (248)
                      +++|++|||||.....+..+ .+.++|++.+++|+.+++.+++++.+.|.+.+ ++||++||..+..+.++...|+++|+
T Consensus        80 ~~id~li~~ag~~~~~~~~~-~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~~iv~isS~~~~~~~~~~~~y~~sK~  158 (246)
T PRK12938         80 GEIDVLVNNAGITRDVVFRK-MTREDWTAVIDTNLTSLFNVTKQVIDGMVERGWGRIINISSVNGQKGQFGQTNYSTAKA  158 (246)
T ss_pred             CCCCEEEECCCCCCCCChhh-CCHHHHHHHHHHhhHHHHHHHHHHHHHHHHcCCeEEEEEechhccCCCCCChhHHHHHH
Confidence            99999999999876554444 47799999999999999999999999987554 89999999998888889999999999


Q ss_pred             HHHHHHHHHHHHhCC-CeEEEEEecCccccCcccc
Q 044010          203 ALVLFFETLRVELGS-DVGVTIVTPGFIESELTQG  236 (248)
Q Consensus       203 al~~l~~~la~~~~~-~i~v~~v~pg~v~T~~~~~  236 (248)
                      ++++++++++.++.+ ++++|+|+||+++|++.+.
T Consensus       159 a~~~~~~~l~~~~~~~gi~v~~i~pg~~~t~~~~~  193 (246)
T PRK12938        159 GIHGFTMSLAQEVATKGVTVNTVSPGYIGTDMVKA  193 (246)
T ss_pred             HHHHHHHHHHHHhhhhCeEEEEEEecccCCchhhh
Confidence            999999999999987 4999999999999998764

>PRK06182 short chain dehydrogenase; Validated

Probab=100.00  E-value=9.2e-33  Score=234.94  Aligned_cols=183  Identities=33%  Similarity=0.533  Sum_probs=163.1

Q ss_pred             CCCCEEEEcCCCChHHHHHHHHHHHcCCeEEEEeCCcchHHHHHHHHHhhCCCcEEEEEccCCCHHHHHHHHHHHHhHcC
Q 044010           45 VSGKVVIITGASSGIGEHLAYEYARRGACLALCARREKSLEEVADTAREIGSPDVITIRADVSKVDDCRSLVEETMNHFG  124 (248)
Q Consensus        45 ~~~k~~lVtGg~~gIG~aia~~l~~~G~~V~l~~r~~~~~~~~~~~l~~~~~~~v~~~~~D~~~~~~~~~~~~~~~~~~g  124 (248)
                      +++|+++||||++|||++++++|+++|++|++++|+.+++++..    +   ..+.++.+|++|.++++++++++.+.++
T Consensus         1 ~~~k~vlItGasggiG~~la~~l~~~G~~V~~~~r~~~~l~~~~----~---~~~~~~~~Dv~~~~~~~~~~~~~~~~~~   73 (273)
T PRK06182          1 MQKKVALVTGASSGIGKATARRLAAQGYTVYGAARRVDKMEDLA----S---LGVHPLSLDVTDEASIKAAVDTIIAEEG   73 (273)
T ss_pred             CCCCEEEEECCCChHHHHHHHHHHHCCCEEEEEeCCHHHHHHHH----h---CCCeEEEeeCCCHHHHHHHHHHHHHhcC
Confidence            46899999999999999999999999999999999976554332    1   1477899999999999999999999999


Q ss_pred             CccEEEEccccCCcccccccCChHHHHHHHHhhhHHHHHHHHHHhhhhhhcC-CeEEEEcCccccccCCCCccchHHHHH
Q 044010          125 RLDHLVNNAGISSVALFEDIVNITDFKQIMNINFWGSVYTTRFAVPHLRYTK-GKIVVLSSAASWLTAPRMSFYNASKAA  203 (248)
Q Consensus       125 ~id~vv~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~-g~iV~isS~~~~~~~~~~~~Y~~sKaa  203 (248)
                      ++|++|||||.....+..+ .+.+++++.+++|+.+++.+++.++|.|++.+ |+||++||..+..+.+....|++||++
T Consensus        74 ~id~li~~ag~~~~~~~~~-~~~~~~~~~~~~n~~~~~~~~~~~l~~~~~~~~g~iv~isS~~~~~~~~~~~~Y~~sKaa  152 (273)
T PRK06182         74 RIDVLVNNAGYGSYGAIED-VPIDEARRQFEVNLFGAARLTQLVLPHMRAQRSGRIINISSMGGKIYTPLGAWYHATKFA  152 (273)
T ss_pred             CCCEEEECCCcCCCCchhh-CCHHHHHHHHhHHhHHHHHHHHHHHHHHHhcCCCEEEEEcchhhcCCCCCccHhHHHHHH
Confidence            9999999999876666555 47899999999999999999999999997554 899999999888888888899999999


Q ss_pred             HHHHHHHHHHHhCC-CeEEEEEecCccccCccc
Q 044010          204 LVLFFETLRVELGS-DVGVTIVTPGFIESELTQ  235 (248)
Q Consensus       204 l~~l~~~la~~~~~-~i~v~~v~pg~v~T~~~~  235 (248)
                      +++++++++.|+.+ +|+|++|+||+++|++..
T Consensus       153 ~~~~~~~l~~e~~~~gi~v~~v~Pg~v~t~~~~  185 (273)
T PRK06182        153 LEGFSDALRLEVAPFGIDVVVIEPGGIKTEWGD  185 (273)
T ss_pred             HHHHHHHHHHHhcccCCEEEEEecCCcccccch
Confidence            99999999999987 499999999999999863

>PRK08063 enoyl-(acyl carrier protein) reductase; Provisional

Probab=100.00  E-value=1.2e-32  Score=230.89  Aligned_cols=190  Identities=30%  Similarity=0.429  Sum_probs=168.6

Q ss_pred             CCCCEEEEcCCCChHHHHHHHHHHHcCCeEEE-EeCCcchHHHHHHHHHhhCCCcEEEEEccCCCHHHHHHHHHHHHhHc
Q 044010           45 VSGKVVIITGASSGIGEHLAYEYARRGACLAL-CARREKSLEEVADTAREIGSPDVITIRADVSKVDDCRSLVEETMNHF  123 (248)
Q Consensus        45 ~~~k~~lVtGg~~gIG~aia~~l~~~G~~V~l-~~r~~~~~~~~~~~l~~~~~~~v~~~~~D~~~~~~~~~~~~~~~~~~  123 (248)
                      |++|+++||||++|||++++++|+++|++|++ .+|+.++.++..+++++.+. ++.++.+|++|+++++++++++.+.+
T Consensus         2 ~~~~~vlItGa~g~iG~~~a~~l~~~g~~v~~~~~r~~~~~~~~~~~~~~~~~-~~~~~~~D~~~~~~~~~~~~~~~~~~   80 (250)
T PRK08063          2 FSGKVALVTGSSRGIGKAIALRLAEEGYDIAVNYARSRKAAEETAEEIEALGR-KALAVKANVGDVEKIKEMFAQIDEEF   80 (250)
T ss_pred             CCCCEEEEeCCCchHHHHHHHHHHHCCCEEEEEcCCCHHHHHHHHHHHHhcCC-eEEEEEcCCCCHHHHHHHHHHHHHHc
Confidence            57899999999999999999999999999876 57888777777777766553 78899999999999999999999999


Q ss_pred             CCccEEEEccccCCcccccccCChHHHHHHHHhhhHHHHHHHHHHhhhhhhc-CCeEEEEcCccccccCCCCccchHHHH
Q 044010          124 GRLDHLVNNAGISSVALFEDIVNITDFKQIMNINFWGSVYTTRFAVPHLRYT-KGKIVVLSSAASWLTAPRMSFYNASKA  202 (248)
Q Consensus       124 g~id~vv~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~-~g~iV~isS~~~~~~~~~~~~Y~~sKa  202 (248)
                      +++|++|||+|.....+..+ .+.++++..+++|+.+++.+++++.+.|.++ .|+||++||..+..+.++...|+++|+
T Consensus        81 ~~id~vi~~ag~~~~~~~~~-~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~g~iv~~sS~~~~~~~~~~~~y~~sK~  159 (250)
T PRK08063         81 GRLDVFVNNAASGVLRPAME-LEESHWDWTMNINAKALLFCAQEAAKLMEKVGGGKIISLSSLGSIRYLENYTTVGVSKA  159 (250)
T ss_pred             CCCCEEEECCCCCCCCCccc-CCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcCCeEEEEEcchhhccCCCCccHHHHHHH
Confidence            99999999999876555554 4679999999999999999999999998754 489999999888888888899999999


Q ss_pred             HHHHHHHHHHHHhCC-CeEEEEEecCccccCcccc
Q 044010          203 ALVLFFETLRVELGS-DVGVTIVTPGFIESELTQG  236 (248)
Q Consensus       203 al~~l~~~la~~~~~-~i~v~~v~pg~v~T~~~~~  236 (248)
                      ++++++++++.++.+ +|++++|+||+++|++...
T Consensus       160 a~~~~~~~~~~~~~~~~i~v~~i~pg~v~t~~~~~  194 (250)
T PRK08063        160 ALEALTRYLAVELAPKGIAVNAVSGGAVDTDALKH  194 (250)
T ss_pred             HHHHHHHHHHHHHhHhCeEEEeEecCcccCchhhh
Confidence            999999999999976 5999999999999998654

>PRK05650 short chain dehydrogenase; Provisional

Probab=100.00  E-value=1.4e-32  Score=233.35  Aligned_cols=188  Identities=36%  Similarity=0.561  Sum_probs=171.0

Q ss_pred             CEEEEcCCCChHHHHHHHHHHHcCCeEEEEeCCcchHHHHHHHHHhhCCCcEEEEEccCCCHHHHHHHHHHHHhHcCCcc
Q 044010           48 KVVIITGASSGIGEHLAYEYARRGACLALCARREKSLEEVADTAREIGSPDVITIRADVSKVDDCRSLVEETMNHFGRLD  127 (248)
Q Consensus        48 k~~lVtGg~~gIG~aia~~l~~~G~~V~l~~r~~~~~~~~~~~l~~~~~~~v~~~~~D~~~~~~~~~~~~~~~~~~g~id  127 (248)
                      |+++||||++|||++++++|+++|++|++++|+.++.++..+++++.+. ++.++.+|++|.++++++++++.+.++++|
T Consensus         1 ~~vlVtGasggIG~~la~~l~~~g~~V~~~~r~~~~~~~~~~~l~~~~~-~~~~~~~D~~~~~~~~~~~~~i~~~~~~id   79 (270)
T PRK05650          1 NRVMITGAASGLGRAIALRWAREGWRLALADVNEEGGEETLKLLREAGG-DGFYQRCDVRDYSQLTALAQACEEKWGGID   79 (270)
T ss_pred             CEEEEecCCChHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcCC-ceEEEEccCCCHHHHHHHHHHHHHHcCCCC
Confidence            5799999999999999999999999999999998888888877776544 788999999999999999999999999999


Q ss_pred             EEEEccccCCcccccccCChHHHHHHHHhhhHHHHHHHHHHhhhhhhcC-CeEEEEcCccccccCCCCccchHHHHHHHH
Q 044010          128 HLVNNAGISSVALFEDIVNITDFKQIMNINFWGSVYTTRFAVPHLRYTK-GKIVVLSSAASWLTAPRMSFYNASKAALVL  206 (248)
Q Consensus       128 ~vv~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~-g~iV~isS~~~~~~~~~~~~Y~~sKaal~~  206 (248)
                      ++|||||........+ .+.+++++.+++|+.+++.+++.++|.|.+.+ ++||++||..+..+.++.+.|+++|+++++
T Consensus        80 ~lI~~ag~~~~~~~~~-~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~~iv~vsS~~~~~~~~~~~~Y~~sKaa~~~  158 (270)
T PRK05650         80 VIVNNAGVASGGFFEE-LSLEDWDWQIAINLMGVVKGCKAFLPLFKRQKSGRIVNIASMAGLMQGPAMSSYNVAKAGVVA  158 (270)
T ss_pred             EEEECCCCCCCCCccc-CCHHHHHHHHHHccHHHHHHHHHHHHHHHhCCCCEEEEECChhhcCCCCCchHHHHHHHHHHH
Confidence            9999999887666555 47799999999999999999999999987554 899999999999999999999999999999


Q ss_pred             HHHHHHHHhCC-CeEEEEEecCccccCccccc
Q 044010          207 FFETLRVELGS-DVGVTIVTPGFIESELTQGK  237 (248)
Q Consensus       207 l~~~la~~~~~-~i~v~~v~pg~v~T~~~~~~  237 (248)
                      ++++++.|+.+ +|++++|+||+++|++....
T Consensus       159 ~~~~l~~e~~~~gi~v~~v~Pg~v~t~~~~~~  190 (270)
T PRK05650        159 LSETLLVELADDEIGVHVVCPSFFQTNLLDSF  190 (270)
T ss_pred             HHHHHHHHhcccCcEEEEEecCccccCccccc
Confidence            99999999976 59999999999999987653

>PRK06940 short chain dehydrogenase; Provisional

Probab=100.00  E-value=8e-33  Score=235.89  Aligned_cols=177  Identities=27%  Similarity=0.400  Sum_probs=153.8

Q ss_pred             CCEEEEcCCCChHHHHHHHHHHHcCCeEEEEeCCcchHHHHHHHHHhhCCCcEEEEEccCCCHHHHHHHHHHHHhHcCCc
Q 044010           47 GKVVIITGASSGIGEHLAYEYARRGACLALCARREKSLEEVADTAREIGSPDVITIRADVSKVDDCRSLVEETMNHFGRL  126 (248)
Q Consensus        47 ~k~~lVtGg~~gIG~aia~~l~~~G~~V~l~~r~~~~~~~~~~~l~~~~~~~v~~~~~D~~~~~~~~~~~~~~~~~~g~i  126 (248)
                      +|+++|||+ +|||+++|++|+ +|++|++++|+.+++++..+++++.+ .++.++.+|++|.++++++++++ ++++++
T Consensus         2 ~k~~lItGa-~gIG~~la~~l~-~G~~Vv~~~r~~~~~~~~~~~l~~~~-~~~~~~~~Dv~d~~~i~~~~~~~-~~~g~i   77 (275)
T PRK06940          2 KEVVVVIGA-GGIGQAIARRVG-AGKKVLLADYNEENLEAAAKTLREAG-FDVSTQEVDVSSRESVKALAATA-QTLGPV   77 (275)
T ss_pred             CCEEEEECC-ChHHHHHHHHHh-CCCEEEEEeCCHHHHHHHHHHHHhcC-CeEEEEEeecCCHHHHHHHHHHH-HhcCCC
Confidence            689999998 699999999996 89999999999887777777776543 37888999999999999999998 568999


Q ss_pred             cEEEEccccCCcccccccCChHHHHHHHHhhhHHHHHHHHHHhhhhhhcCCeEEEEcCccccccC---------------
Q 044010          127 DHLVNNAGISSVALFEDIVNITDFKQIMNINFWGSVYTTRFAVPHLRYTKGKIVVLSSAASWLTA---------------  191 (248)
Q Consensus       127 d~vv~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~g~iV~isS~~~~~~~---------------  191 (248)
                      |++|||||...        ..++|++++++|+.+++++++.+.|.|+ .+|++|++||.++..+.               
T Consensus        78 d~li~nAG~~~--------~~~~~~~~~~vN~~g~~~l~~~~~~~m~-~~g~iv~isS~~~~~~~~~~~~~~~~~~~~~~  148 (275)
T PRK06940         78 TGLVHTAGVSP--------SQASPEAILKVDLYGTALVLEEFGKVIA-PGGAGVVIASQSGHRLPALTAEQERALATTPT  148 (275)
T ss_pred             CEEEECCCcCC--------chhhHHHHHHHhhHHHHHHHHHHHHHHh-hCCCEEEEEecccccCcccchhhhcccccccc
Confidence            99999999752        2367999999999999999999999996 45788999998876542               


Q ss_pred             ---------------CCCccchHHHHHHHHHHHHHHHHhCCC-eEEEEEecCccccCcccc
Q 044010          192 ---------------PRMSFYNASKAALVLFFETLRVELGSD-VGVTIVTPGFIESELTQG  236 (248)
Q Consensus       192 ---------------~~~~~Y~~sKaal~~l~~~la~~~~~~-i~v~~v~pg~v~T~~~~~  236 (248)
                                     +++..|++||+|+++++++++.|++++ ||||+|+||+++|+|...
T Consensus       149 ~~~~~~~~~~~~~~~~~~~~Y~asKaa~~~~~~~la~e~~~~gIrvn~i~PG~v~T~~~~~  209 (275)
T PRK06940        149 EELLSLPFLQPDAIEDSLHAYQIAKRANALRVMAEAVKWGERGARINSISPGIISTPLAQD  209 (275)
T ss_pred             ccccccccccccccCCccchhHHHHHHHHHHHHHHHHHHccCCeEEEEeccCcCcCccchh
Confidence                           246789999999999999999999874 999999999999998754

>PRK06701 short chain dehydrogenase; Provisional

Probab=100.00  E-value=2.1e-32  Score=235.02  Aligned_cols=193  Identities=30%  Similarity=0.420  Sum_probs=168.0

Q ss_pred             cCCCCCEEEEcCCCChHHHHHHHHHHHcCCeEEEEeCCcc-hHHHHHHHHHhhCCCcEEEEEccCCCHHHHHHHHHHHHh
Q 044010           43 EDVSGKVVIITGASSGIGEHLAYEYARRGACLALCARREK-SLEEVADTAREIGSPDVITIRADVSKVDDCRSLVEETMN  121 (248)
Q Consensus        43 ~~~~~k~~lVtGg~~gIG~aia~~l~~~G~~V~l~~r~~~-~~~~~~~~l~~~~~~~v~~~~~D~~~~~~~~~~~~~~~~  121 (248)
                      +++++|++|||||++|||.+++++|+++|++|++++|+.+ ..+...+.++..+ .++.++.+|+++.++++++++++.+
T Consensus        42 ~~~~~k~iLItGasggIG~~la~~l~~~G~~V~l~~r~~~~~~~~~~~~~~~~~-~~~~~~~~Dl~~~~~~~~~~~~i~~  120 (290)
T PRK06701         42 GKLKGKVALITGGDSGIGRAVAVLFAKEGADIAIVYLDEHEDANETKQRVEKEG-VKCLLIPGDVSDEAFCKDAVEETVR  120 (290)
T ss_pred             cCCCCCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEeCCcchHHHHHHHHHHhcC-CeEEEEEccCCCHHHHHHHHHHHHH
Confidence            5788999999999999999999999999999999999864 3444445554433 4788999999999999999999999


Q ss_pred             HcCCccEEEEccccCCcccccccCChHHHHHHHHhhhHHHHHHHHHHhhhhhhcCCeEEEEcCccccccCCCCccchHHH
Q 044010          122 HFGRLDHLVNNAGISSVALFEDIVNITDFKQIMNINFWGSVYTTRFAVPHLRYTKGKIVVLSSAASWLTAPRMSFYNASK  201 (248)
Q Consensus       122 ~~g~id~vv~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~g~iV~isS~~~~~~~~~~~~Y~~sK  201 (248)
                      .++++|++|||||.........+.+.++|.+.+++|+.+++.+++++.+.|+ .++++|++||..+..+.+....|++||
T Consensus       121 ~~~~iD~lI~~Ag~~~~~~~~~~~~~~~~~~~~~~N~~~~~~l~~a~~~~~~-~~g~iV~isS~~~~~~~~~~~~Y~~sK  199 (290)
T PRK06701        121 ELGRLDILVNNAAFQYPQQSLEDITAEQLDKTFKTNIYSYFHMTKAALPHLK-QGSAIINTGSITGYEGNETLIDYSATK  199 (290)
T ss_pred             HcCCCCEEEECCcccCCCCCcccCCHHHHHHHHhhhhHHHHHHHHHHHHHHh-hCCeEEEEecccccCCCCCcchhHHHH
Confidence            9999999999999764433333357899999999999999999999999885 458999999999998888889999999


Q ss_pred             HHHHHHHHHHHHHhCC-CeEEEEEecCccccCccccc
Q 044010          202 AALVLFFETLRVELGS-DVGVTIVTPGFIESELTQGK  237 (248)
Q Consensus       202 aal~~l~~~la~~~~~-~i~v~~v~pg~v~T~~~~~~  237 (248)
                      +|+++++++++.++.+ +|||++|+||+++|++....
T Consensus       200 ~a~~~l~~~la~~~~~~gIrv~~i~pG~v~T~~~~~~  236 (290)
T PRK06701        200 GAIHAFTRSLAQSLVQKGIRVNAVAPGPIWTPLIPSD  236 (290)
T ss_pred             HHHHHHHHHHHHHhhhcCeEEEEEecCCCCCcccccc
Confidence            9999999999999977 59999999999999987543

>PRK12748 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional

Probab=100.00  E-value=1.5e-32  Score=231.45  Aligned_cols=192  Identities=21%  Similarity=0.272  Sum_probs=164.9

Q ss_pred             cCCCCCEEEEcCCCC--hHHHHHHHHHHHcCCeEEEEeCCc-----------chHHHHHHHHHhhCCCcEEEEEccCCCH
Q 044010           43 EDVSGKVVIITGASS--GIGEHLAYEYARRGACLALCARRE-----------KSLEEVADTAREIGSPDVITIRADVSKV  109 (248)
Q Consensus        43 ~~~~~k~~lVtGg~~--gIG~aia~~l~~~G~~V~l~~r~~-----------~~~~~~~~~l~~~~~~~v~~~~~D~~~~  109 (248)
                      +++++|++|||||++  |||.+++++|+++|++|++++|++           .......+.+...+ .++.++.+|+++.
T Consensus         1 ~~l~~k~vlItGas~~~giG~~la~~l~~~G~~vi~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~D~~~~   79 (256)
T PRK12748          1 LPLMKKIALVTGASRLNGIGAAVCRRLAAKGIDIFFTYWSPYDKTMPWGMHDKEPVLLKEEIESYG-VRCEHMEIDLSQP   79 (256)
T ss_pred             CCCCCcEEEEeCCCCCCCHHHHHHHHHHHcCCcEEEEcCCccccccccccchhhHHHHHHHHHhcC-CeEEEEECCCCCH
Confidence            367899999999994  999999999999999999999872           22222334444333 3788999999999


Q ss_pred             HHHHHHHHHHHhHcCCccEEEEccccCCcccccccCChHHHHHHHHhhhHHHHHHHHHHhhhhhhc-CCeEEEEcCcccc
Q 044010          110 DDCRSLVEETMNHFGRLDHLVNNAGISSVALFEDIVNITDFKQIMNINFWGSVYTTRFAVPHLRYT-KGKIVVLSSAASW  188 (248)
Q Consensus       110 ~~~~~~~~~~~~~~g~id~vv~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~-~g~iV~isS~~~~  188 (248)
                      ++++++++++.++++++|++|||||.....+..+ .+.+++++.+++|+.+++.+.+++.+.|.+. .+++|++||..+.
T Consensus        80 ~~~~~~~~~~~~~~g~id~vi~~ag~~~~~~~~~-~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~iv~~ss~~~~  158 (256)
T PRK12748         80 YAPNRVFYAVSERLGDPSILINNAAYSTHTRLEE-LTAEQLDKHYAVNVRATMLLSSAFAKQYDGKAGGRIINLTSGQSL  158 (256)
T ss_pred             HHHHHHHHHHHHhCCCCCEEEECCCcCCCCChhh-CCHHHHHHHHHHHhHHHHHHHHHHHHHhhhcCCeEEEEECCcccc
Confidence            9999999999999999999999999876555544 4678999999999999999999999998654 4899999999988


Q ss_pred             ccCCCCccchHHHHHHHHHHHHHHHHhCC-CeEEEEEecCccccCcccc
Q 044010          189 LTAPRMSFYNASKAALVLFFETLRVELGS-DVGVTIVTPGFIESELTQG  236 (248)
Q Consensus       189 ~~~~~~~~Y~~sKaal~~l~~~la~~~~~-~i~v~~v~pg~v~T~~~~~  236 (248)
                      .+.++...|++||+++++++++++.++++ +|+|++|+||+++|++...
T Consensus       159 ~~~~~~~~Y~~sK~a~~~~~~~la~e~~~~~i~v~~i~Pg~~~t~~~~~  207 (256)
T PRK12748        159 GPMPDELAYAATKGAIEAFTKSLAPELAEKGITVNAVNPGPTDTGWITE  207 (256)
T ss_pred             CCCCCchHHHHHHHHHHHHHHHHHHHHHHhCeEEEEEEeCcccCCCCCh
Confidence            88888899999999999999999999976 4999999999999997653

>PRK06523 short chain dehydrogenase; Provisional

Probab=100.00  E-value=1.1e-32  Score=232.62  Aligned_cols=183  Identities=27%  Similarity=0.429  Sum_probs=160.4

Q ss_pred             cCCCCCEEEEcCCCChHHHHHHHHHHHcCCeEEEEeCCcchHHHHHHHHHhhCCCcEEEEEccCCCHHHHHHHHHHHHhH
Q 044010           43 EDVSGKVVIITGASSGIGEHLAYEYARRGACLALCARREKSLEEVADTAREIGSPDVITIRADVSKVDDCRSLVEETMNH  122 (248)
Q Consensus        43 ~~~~~k~~lVtGg~~gIG~aia~~l~~~G~~V~l~~r~~~~~~~~~~~l~~~~~~~v~~~~~D~~~~~~~~~~~~~~~~~  122 (248)
                      .+++||++|||||++|||.+++++|+++|++|++++|+.++.         . ..++.++.+|++|.++++++++++.++
T Consensus         5 ~~~~~k~vlItGas~gIG~~ia~~l~~~G~~v~~~~r~~~~~---------~-~~~~~~~~~D~~~~~~~~~~~~~~~~~   74 (260)
T PRK06523          5 LELAGKRALVTGGTKGIGAATVARLLEAGARVVTTARSRPDD---------L-PEGVEFVAADLTTAEGCAAVARAVLER   74 (260)
T ss_pred             cCCCCCEEEEECCCCchhHHHHHHHHHCCCEEEEEeCChhhh---------c-CCceeEEecCCCCHHHHHHHHHHHHHH
Confidence            478999999999999999999999999999999999986421         1 125788999999999999999999999


Q ss_pred             cCCccEEEEccccCC--cccccccCChHHHHHHHHhhhHHHHHHHHHHhhhhhhcC-CeEEEEcCccccccCC-CCccch
Q 044010          123 FGRLDHLVNNAGISS--VALFEDIVNITDFKQIMNINFWGSVYTTRFAVPHLRYTK-GKIVVLSSAASWLTAP-RMSFYN  198 (248)
Q Consensus       123 ~g~id~vv~~ag~~~--~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~-g~iV~isS~~~~~~~~-~~~~Y~  198 (248)
                      ++++|++|||||...  ..+..+ .+.++|++.+++|+.+++.+++.++|.|++++ |+||++||..+..+.+ +..+|+
T Consensus        75 ~~~id~vi~~ag~~~~~~~~~~~-~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~g~ii~isS~~~~~~~~~~~~~Y~  153 (260)
T PRK06523         75 LGGVDILVHVLGGSSAPAGGFAA-LTDEEWQDELNLNLLAAVRLDRALLPGMIARGSGVIIHVTSIQRRLPLPESTTAYA  153 (260)
T ss_pred             cCCCCEEEECCcccccCCCCccc-CCHHHHHHHHhHhhHHHHHHHHHHHHHHHhcCCcEEEEEecccccCCCCCCcchhH
Confidence            999999999999653  222333 46799999999999999999999999997554 8999999999887755 788999


Q ss_pred             HHHHHHHHHHHHHHHHhCCC-eEEEEEecCccccCcccc
Q 044010          199 ASKAALVLFFETLRVELGSD-VGVTIVTPGFIESELTQG  236 (248)
Q Consensus       199 ~sKaal~~l~~~la~~~~~~-i~v~~v~pg~v~T~~~~~  236 (248)
                      +||+++++++++++.++++. |+||+|+||+++|++...
T Consensus       154 ~sK~a~~~l~~~~a~~~~~~gi~v~~i~Pg~v~t~~~~~  192 (260)
T PRK06523        154 AAKAALSTYSKSLSKEVAPKGVRVNTVSPGWIETEAAVA  192 (260)
T ss_pred             HHHHHHHHHHHHHHHHHhhcCcEEEEEecCcccCccHHH
Confidence            99999999999999999874 999999999999998653

>TIGR01289 LPOR light-dependent protochlorophyllide reductase

Probab=100.00  E-value=1.3e-32  Score=238.77  Aligned_cols=190  Identities=22%  Similarity=0.259  Sum_probs=160.7

Q ss_pred             CCCEEEEcCCCChHHHHHHHHHHHcC-CeEEEEeCCcchHHHHHHHHHhhCCCcEEEEEccCCCHHHHHHHHHHHHhHcC
Q 044010           46 SGKVVIITGASSGIGEHLAYEYARRG-ACLALCARREKSLEEVADTAREIGSPDVITIRADVSKVDDCRSLVEETMNHFG  124 (248)
Q Consensus        46 ~~k~~lVtGg~~gIG~aia~~l~~~G-~~V~l~~r~~~~~~~~~~~l~~~~~~~v~~~~~D~~~~~~~~~~~~~~~~~~g  124 (248)
                      .+|+++||||++|||+++|++|+++| ++|++++|+.++.++..+++... +.++.++.+|++|.++++++++++.+.++
T Consensus         2 ~~k~vlITGas~GIG~aia~~L~~~G~~~V~l~~r~~~~~~~~~~~l~~~-~~~~~~~~~Dl~~~~~v~~~~~~~~~~~~   80 (314)
T TIGR01289         2 QKPTVIITGASSGLGLYAAKALAATGEWHVIMACRDFLKAEQAAKSLGMP-KDSYTIMHLDLGSLDSVRQFVQQFRESGR   80 (314)
T ss_pred             CCCEEEEECCCChHHHHHHHHHHHcCCCEEEEEeCCHHHHHHHHHHhcCC-CCeEEEEEcCCCCHHHHHHHHHHHHHhCC
Confidence            47899999999999999999999999 99999999988877777766433 33678899999999999999999988889


Q ss_pred             CccEEEEccccCCcccccccCChHHHHHHHHhhhHHHHHHHHHHhhhhhhc---CCeEEEEcCcccccc-----------
Q 044010          125 RLDHLVNNAGISSVALFEDIVNITDFKQIMNINFWGSVYTTRFAVPHLRYT---KGKIVVLSSAASWLT-----------  190 (248)
Q Consensus       125 ~id~vv~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~---~g~iV~isS~~~~~~-----------  190 (248)
                      ++|++|||||+..+.......+.++|+..+++|+.+++.+++.++|.|++.   .|+||++||..+..+           
T Consensus        81 ~iD~lI~nAG~~~~~~~~~~~~~~~~~~~~~vN~~~~~~l~~~~l~~m~~~~~~~g~IV~vsS~~~~~~~~~~~~~~~~~  160 (314)
T TIGR01289        81 PLDALVCNAAVYFPTAKEPRFTADGFELSVGTNHLGHFLLCNLLLDDLKNSPNKDKRLIIVGSITGNTNTLAGNVPPKAN  160 (314)
T ss_pred             CCCEEEECCCccccCccccccCHHHHHHHHhhhhhHHHHHHHHHHHHHHhCCCCCCeEEEEecCccccccCCCcCCCccc
Confidence            999999999976432222224679999999999999999999999999755   379999999876421           


Q ss_pred             ----------------------CCCCccchHHHHHHHHHHHHHHHHhC--CCeEEEEEecCcc-ccCcccc
Q 044010          191 ----------------------APRMSFYNASKAALVLFFETLRVELG--SDVGVTIVTPGFI-ESELTQG  236 (248)
Q Consensus       191 ----------------------~~~~~~Y~~sKaal~~l~~~la~~~~--~~i~v~~v~pg~v-~T~~~~~  236 (248)
                                            ..+..+|++||+|+..+++.+++++.  ++|+|++|+||.| +|+|.+.
T Consensus       161 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~SK~a~~~~~~~la~~~~~~~gi~v~~v~PG~v~~T~l~~~  231 (314)
T TIGR01289       161 LGDLSGLAAGFKAPIAMIDGKEFKGAKAYKDSKVCNMLTVRELHRRFHDETGITFASLYPGCIADTGLFRE  231 (314)
T ss_pred             ccccccccccCCCcccccCCCCcchhhhHHHhHHHHHHHHHHHHHHhccCCCeEEEEecCCcccCCccccc
Confidence                                  12346799999999999999999984  3599999999999 6998754

This model represents the light-dependent, NADPH-dependent form of protochlorophyllide reductase. It belongs to the short chain alcohol dehydrogenase family, in contrast to the nitrogenase-related light-independent form.

>PRK06171 sorbitol-6-phosphate 2-dehydrogenase; Provisional

Probab=100.00  E-value=1.4e-32  Score=232.77  Aligned_cols=183  Identities=32%  Similarity=0.439  Sum_probs=160.7

Q ss_pred             cCCCCCEEEEcCCCChHHHHHHHHHHHcCCeEEEEeCCcchHHHHHHHHHhhCCCcEEEEEccCCCHHHHHHHHHHHHhH
Q 044010           43 EDVSGKVVIITGASSGIGEHLAYEYARRGACLALCARREKSLEEVADTAREIGSPDVITIRADVSKVDDCRSLVEETMNH  122 (248)
Q Consensus        43 ~~~~~k~~lVtGg~~gIG~aia~~l~~~G~~V~l~~r~~~~~~~~~~~l~~~~~~~v~~~~~D~~~~~~~~~~~~~~~~~  122 (248)
                      +++++|+++||||++|||.+++++|+++|++|++.+|+..+.+          ..++.++.+|++|.++++++++++.++
T Consensus         5 ~~l~~k~vlItG~s~gIG~~la~~l~~~G~~v~~~~~~~~~~~----------~~~~~~~~~D~~~~~~~~~~~~~~~~~   74 (266)
T PRK06171          5 LNLQGKIIIVTGGSSGIGLAIVKELLANGANVVNADIHGGDGQ----------HENYQFVPTDVSSAEEVNHTVAEIIEK   74 (266)
T ss_pred             ccCCCCEEEEeCCCChHHHHHHHHHHHCCCEEEEEeCCccccc----------cCceEEEEccCCCHHHHHHHHHHHHHH
Confidence            4688999999999999999999999999999999999875432          125778999999999999999999999


Q ss_pred             cCCccEEEEccccCCccccc--------ccCChHHHHHHHHhhhHHHHHHHHHHhhhhhhc-CCeEEEEcCccccccCCC
Q 044010          123 FGRLDHLVNNAGISSVALFE--------DIVNITDFKQIMNINFWGSVYTTRFAVPHLRYT-KGKIVVLSSAASWLTAPR  193 (248)
Q Consensus       123 ~g~id~vv~~ag~~~~~~~~--------~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~-~g~iV~isS~~~~~~~~~  193 (248)
                      ++++|++|||||...+....        ...+.++|++.+++|+.+++.+++++.+.|.++ .|+||++||..+..+.++
T Consensus        75 ~g~id~li~~Ag~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~g~iv~isS~~~~~~~~~  154 (266)
T PRK06171         75 FGRIDGLVNNAGINIPRLLVDEKDPAGKYELNEAAFDKMFNINQKGVFLMSQAVARQMVKQHDGVIVNMSSEAGLEGSEG  154 (266)
T ss_pred             cCCCCEEEECCcccCCccccccccccccccCCHHHHHHHHhhhchhHHHHHHHHHHHHHhcCCcEEEEEccccccCCCCC
Confidence            99999999999976433221        124679999999999999999999999998754 489999999999988889


Q ss_pred             CccchHHHHHHHHHHHHHHHHhCC-CeEEEEEecCccc-cCccc
Q 044010          194 MSFYNASKAALVLFFETLRVELGS-DVGVTIVTPGFIE-SELTQ  235 (248)
Q Consensus       194 ~~~Y~~sKaal~~l~~~la~~~~~-~i~v~~v~pg~v~-T~~~~  235 (248)
                      ...|++||+++++++++++.++++ +||||+|+||+++ |++..
T Consensus       155 ~~~Y~~sK~a~~~l~~~la~e~~~~gi~v~~v~pG~~~~t~~~~  198 (266)
T PRK06171        155 QSCYAATKAALNSFTRSWAKELGKHNIRVVGVAPGILEATGLRT  198 (266)
T ss_pred             CchhHHHHHHHHHHHHHHHHHhhhcCeEEEEEeccccccCCCcC
Confidence            999999999999999999999987 4999999999997 67643

>KOG1014 consensus 17 beta-hydroxysteroid dehydrogenase type 3, HSD17B3 [Lipid transport and metabolism]

Probab=100.00  E-value=3.6e-33  Score=233.41  Aligned_cols=190  Identities=30%  Similarity=0.397  Sum_probs=166.9

Q ss_pred             CCEEEEcCCCChHHHHHHHHHHHcCCeEEEEeCCcchHHHHHHHHHhhCCCcEEEEEccCCCHHHHHHHHHHHHhHcCCc
Q 044010           47 GKVVIITGASSGIGEHLAYEYARRGACLALCARREKSLEEVADTAREIGSPDVITIRADVSKVDDCRSLVEETMNHFGRL  126 (248)
Q Consensus        47 ~k~~lVtGg~~gIG~aia~~l~~~G~~V~l~~r~~~~~~~~~~~l~~~~~~~v~~~~~D~~~~~~~~~~~~~~~~~~g~i  126 (248)
                      |+|++|||||+|||++.|++||++|.+|++++|++++++...+|+.+.++.+++++.+|+++.+.+.+-+.+-... .+|
T Consensus        49 g~WAVVTGaTDGIGKayA~eLAkrG~nvvLIsRt~~KL~~v~kEI~~~~~vev~~i~~Dft~~~~~ye~i~~~l~~-~~V  127 (312)
T KOG1014|consen   49 GSWAVVTGATDGIGKAYARELAKRGFNVVLISRTQEKLEAVAKEIEEKYKVEVRIIAIDFTKGDEVYEKLLEKLAG-LDV  127 (312)
T ss_pred             CCEEEEECCCCcchHHHHHHHHHcCCEEEEEeCCHHHHHHHHHHHHHHhCcEEEEEEEecCCCchhHHHHHHHhcC-Cce
Confidence            4999999999999999999999999999999999999999999999988888999999999987633322222221 379


Q ss_pred             cEEEEccccCC--cccccccCChHHHHHHHHhhhHHHHHHHHHHhhhhhh-cCCeEEEEcCccccccCCCCccchHHHHH
Q 044010          127 DHLVNNAGISS--VALFEDIVNITDFKQIMNINFWGSVYTTRFAVPHLRY-TKGKIVVLSSAASWLTAPRMSFYNASKAA  203 (248)
Q Consensus       127 d~vv~~ag~~~--~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~-~~g~iV~isS~~~~~~~~~~~~Y~~sKaa  203 (248)
                      -++|||+|...  |..+.+ .+.+.+++.+++|..++..+.+.++|.|.+ ++|-|||+||.++..+.|.++.|+++|+.
T Consensus       128 gILVNNvG~~~~~P~~f~~-~~~~~~~~ii~vN~~~~~~~t~~ilp~M~~r~~G~IvnigS~ag~~p~p~~s~ysasK~~  206 (312)
T KOG1014|consen  128 GILVNNVGMSYDYPESFLK-YPEGELQNIINVNILSVTLLTQLILPGMVERKKGIIVNIGSFAGLIPTPLLSVYSASKAF  206 (312)
T ss_pred             EEEEecccccCCCcHHHHh-CchhhhhheeEEecchHHHHHHHhhhhhhcCCCceEEEeccccccccChhHHHHHHHHHH
Confidence            99999999776  555555 354589999999999999999999999865 56999999999999999999999999999


Q ss_pred             HHHHHHHHHHHhCCC-eEEEEEecCccccCcccccc
Q 044010          204 LVLFFETLRVELGSD-VGVTIVTPGFIESELTQGKF  238 (248)
Q Consensus       204 l~~l~~~la~~~~~~-i~v~~v~pg~v~T~~~~~~~  238 (248)
                      ++.++++|+.|++.. |.|.++.|..|-|+|.....
T Consensus       207 v~~~S~~L~~Ey~~~gI~Vq~v~p~~VaTkm~~~~~  242 (312)
T KOG1014|consen  207 VDFFSRCLQKEYESKGIFVQSVIPYLVATKMAKYRK  242 (312)
T ss_pred             HHHHHHHHHHHHHhcCeEEEEeehhheeccccccCC
Confidence            999999999999874 99999999999999987654

>PRK12939 short chain dehydrogenase; Provisional

Probab=100.00  E-value=2.9e-32  Score=228.24  Aligned_cols=193  Identities=31%  Similarity=0.496  Sum_probs=173.2

Q ss_pred             cCCCCCEEEEcCCCChHHHHHHHHHHHcCCeEEEEeCCcchHHHHHHHHHhhCCCcEEEEEccCCCHHHHHHHHHHHHhH
Q 044010           43 EDVSGKVVIITGASSGIGEHLAYEYARRGACLALCARREKSLEEVADTAREIGSPDVITIRADVSKVDDCRSLVEETMNH  122 (248)
Q Consensus        43 ~~~~~k~~lVtGg~~gIG~aia~~l~~~G~~V~l~~r~~~~~~~~~~~l~~~~~~~v~~~~~D~~~~~~~~~~~~~~~~~  122 (248)
                      .++++|+++||||++|||.+++++|+++|++|++++|++++.++..+++++.+ .++.++.+|++|.++++++++++.+.
T Consensus         3 ~~~~~~~vlItGa~g~iG~~la~~l~~~G~~v~~~~r~~~~~~~~~~~~~~~~-~~~~~~~~Dl~~~~~~~~~~~~~~~~   81 (250)
T PRK12939          3 SNLAGKRALVTGAARGLGAAFAEALAEAGATVAFNDGLAAEARELAAALEAAG-GRAHAIAADLADPASVQRFFDAAAAA   81 (250)
T ss_pred             CCCCCCEEEEeCCCChHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHHHHhcC-CcEEEEEccCCCHHHHHHHHHHHHHH
Confidence            36789999999999999999999999999999999999888887777776554 37889999999999999999999999


Q ss_pred             cCCccEEEEccccCCcccccccCChHHHHHHHHhhhHHHHHHHHHHhhhhhhc-CCeEEEEcCccccccCCCCccchHHH
Q 044010          123 FGRLDHLVNNAGISSVALFEDIVNITDFKQIMNINFWGSVYTTRFAVPHLRYT-KGKIVVLSSAASWLTAPRMSFYNASK  201 (248)
Q Consensus       123 ~g~id~vv~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~-~g~iV~isS~~~~~~~~~~~~Y~~sK  201 (248)
                      ++++|++|||+|.....+..+ .+.+++++.++.|+.+++.+.+.+.+.|.+. .|++|++||..+..+.+....|+++|
T Consensus        82 ~~~id~vi~~ag~~~~~~~~~-~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~g~iv~isS~~~~~~~~~~~~y~~sK  160 (250)
T PRK12939         82 LGGLDGLVNNAGITNSKSATE-LDIDTWDAVMNVNVRGTFLMLRAALPHLRDSGRGRIVNLASDTALWGAPKLGAYVASK  160 (250)
T ss_pred             cCCCCEEEECCCCCCCCChhh-CCHHHHHHHHHHhhHHHHHHHHHHHHHHHHcCCeEEEEECchhhccCCCCcchHHHHH
Confidence            999999999999876655444 4779999999999999999999999998654 48999999999988888889999999


Q ss_pred             HHHHHHHHHHHHHhCC-CeEEEEEecCccccCccccc
Q 044010          202 AALVLFFETLRVELGS-DVGVTIVTPGFIESELTQGK  237 (248)
Q Consensus       202 aal~~l~~~la~~~~~-~i~v~~v~pg~v~T~~~~~~  237 (248)
                      ++++.+++.++.++++ ++++++|+||+++|++....
T Consensus       161 ~~~~~~~~~l~~~~~~~~i~v~~v~pg~v~t~~~~~~  197 (250)
T PRK12939        161 GAVIGMTRSLARELGGRGITVNAIAPGLTATEATAYV  197 (250)
T ss_pred             HHHHHHHHHHHHHHhhhCEEEEEEEECCCCCcccccc
Confidence            9999999999999976 59999999999999997643

>PRK06138 short chain dehydrogenase; Provisional

Probab=100.00  E-value=2.2e-32  Score=229.28  Aligned_cols=192  Identities=28%  Similarity=0.424  Sum_probs=171.4

Q ss_pred             cCCCCCEEEEcCCCChHHHHHHHHHHHcCCeEEEEeCCcchHHHHHHHHHhhCCCcEEEEEccCCCHHHHHHHHHHHHhH
Q 044010           43 EDVSGKVVIITGASSGIGEHLAYEYARRGACLALCARREKSLEEVADTAREIGSPDVITIRADVSKVDDCRSLVEETMNH  122 (248)
Q Consensus        43 ~~~~~k~~lVtGg~~gIG~aia~~l~~~G~~V~l~~r~~~~~~~~~~~l~~~~~~~v~~~~~D~~~~~~~~~~~~~~~~~  122 (248)
                      |++++|+++||||+++||.+++++|+++|++|++++|+.++.++..+++.  .+.++.++.+|++|.++++++++++.++
T Consensus         1 m~~~~k~~lItG~sg~iG~~la~~l~~~G~~v~~~~r~~~~~~~~~~~~~--~~~~~~~~~~D~~~~~~~~~~~~~i~~~   78 (252)
T PRK06138          1 MRLAGRVAIVTGAGSGIGRATAKLFAREGARVVVADRDAEAAERVAAAIA--AGGRAFARQGDVGSAEAVEALVDFVAAR   78 (252)
T ss_pred             CCCCCcEEEEeCCCchHHHHHHHHHHHCCCeEEEecCCHHHHHHHHHHHh--cCCeEEEEEcCCCCHHHHHHHHHHHHHH
Confidence            46889999999999999999999999999999999999877777666665  2346889999999999999999999999


Q ss_pred             cCCccEEEEccccCCcccccccCChHHHHHHHHhhhHHHHHHHHHHhhhhhhcC-CeEEEEcCccccccCCCCccchHHH
Q 044010          123 FGRLDHLVNNAGISSVALFEDIVNITDFKQIMNINFWGSVYTTRFAVPHLRYTK-GKIVVLSSAASWLTAPRMSFYNASK  201 (248)
Q Consensus       123 ~g~id~vv~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~-g~iV~isS~~~~~~~~~~~~Y~~sK  201 (248)
                      ++++|++|||+|........+ .+.+++++.+++|+.+++.+.+.+.+.|++.+ ++|+++||..+..+.++...|+++|
T Consensus        79 ~~~id~vi~~ag~~~~~~~~~-~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~ii~~sS~~~~~~~~~~~~Y~~sK  157 (252)
T PRK06138         79 WGRLDVLVNNAGFGCGGTVVT-TDEADWDAVMRVNVGGVFLWAKYAIPIMQRQGGGSIVNTASQLALAGGRGRAAYVASK  157 (252)
T ss_pred             cCCCCEEEECCCCCCCCCccc-CCHHHHHHHHhhhhhhHHHHHHHHHHHHHhcCCeEEEEECChhhccCCCCccHHHHHH
Confidence            999999999999876655444 46799999999999999999999999987544 8999999998888888899999999


Q ss_pred             HHHHHHHHHHHHHhCC-CeEEEEEecCccccCccccc
Q 044010          202 AALVLFFETLRVELGS-DVGVTIVTPGFIESELTQGK  237 (248)
Q Consensus       202 aal~~l~~~la~~~~~-~i~v~~v~pg~v~T~~~~~~  237 (248)
                      ++++.++++++.++++ ++++++++||.+.|++....
T Consensus       158 ~a~~~~~~~l~~~~~~~~i~v~~v~pg~~~t~~~~~~  194 (252)
T PRK06138        158 GAIASLTRAMALDHATDGIRVNAVAPGTIDTPYFRRI  194 (252)
T ss_pred             HHHHHHHHHHHHHHHhcCeEEEEEEECCccCcchhhh
Confidence            9999999999999976 59999999999999987654

>PRK12384 sorbitol-6-phosphate dehydrogenase; Provisional

Probab=100.00  E-value=2.5e-32  Score=230.22  Aligned_cols=189  Identities=23%  Similarity=0.307  Sum_probs=167.8

Q ss_pred             CCEEEEcCCCChHHHHHHHHHHHcCCeEEEEeCCcchHHHHHHHHHhhCC-CcEEEEEccCCCHHHHHHHHHHHHhHcCC
Q 044010           47 GKVVIITGASSGIGEHLAYEYARRGACLALCARREKSLEEVADTAREIGS-PDVITIRADVSKVDDCRSLVEETMNHFGR  125 (248)
Q Consensus        47 ~k~~lVtGg~~gIG~aia~~l~~~G~~V~l~~r~~~~~~~~~~~l~~~~~-~~v~~~~~D~~~~~~~~~~~~~~~~~~g~  125 (248)
                      +|++|||||+++||.+++++|+++|++|++++|+.+..++..+++....+ .++.++.+|+++.++++++++++.+.+++
T Consensus         2 ~k~ilItG~~~~IG~~la~~l~~~g~~vi~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~i~~~~~~~~~~~~~   81 (259)
T PRK12384          2 NQVAVVIGGGQTLGAFLCHGLAEEGYRVAVADINSEKAANVAQEINAEYGEGMAYGFGADATSEQSVLALSRGVDEIFGR   81 (259)
T ss_pred             CCEEEEECCCcHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHHhcCCceeEEEEccCCCHHHHHHHHHHHHHHcCC
Confidence            68999999999999999999999999999999998887777777765543 46889999999999999999999999999


Q ss_pred             ccEEEEccccCCcccccccCChHHHHHHHHhhhHHHHHHHHHHhhhhhhc--CCeEEEEcCccccccCCCCccchHHHHH
Q 044010          126 LDHLVNNAGISSVALFEDIVNITDFKQIMNINFWGSVYTTRFAVPHLRYT--KGKIVVLSSAASWLTAPRMSFYNASKAA  203 (248)
Q Consensus       126 id~vv~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~--~g~iV~isS~~~~~~~~~~~~Y~~sKaa  203 (248)
                      +|++|||||.....+..+ .+.++|++.+++|+.+++.+++++.+.|.++  ++++|++||..+..+.+...+|++||+|
T Consensus        82 id~vv~~ag~~~~~~~~~-~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~~~~iv~~ss~~~~~~~~~~~~Y~~sKaa  160 (259)
T PRK12384         82 VDLLVYNAGIAKAAFITD-FQLGDFDRSLQVNLVGYFLCAREFSRLMIRDGIQGRIIQINSKSGKVGSKHNSGYSAAKFG  160 (259)
T ss_pred             CCEEEECCCcCCCCCccc-CCHHHHHHHHHhccHHHHHHHHHHHHHHHhCCCCcEEEEecCcccccCCCCCchhHHHHHH
Confidence            999999999876665555 5789999999999999999999999998654  4799999998888887888899999999


Q ss_pred             HHHHHHHHHHHhCC-CeEEEEEecCcc-ccCcccc
Q 044010          204 LVLFFETLRVELGS-DVGVTIVTPGFI-ESELTQG  236 (248)
Q Consensus       204 l~~l~~~la~~~~~-~i~v~~v~pg~v-~T~~~~~  236 (248)
                      ++++++++++|+++ +|+||+|+||++ .|++...
T Consensus       161 ~~~l~~~la~e~~~~gi~v~~v~pg~~~~~~~~~~  195 (259)
T PRK12384        161 GVGLTQSLALDLAEYGITVHSLMLGNLLKSPMFQS  195 (259)
T ss_pred             HHHHHHHHHHHHHHcCcEEEEEecCCcccchhhhh
Confidence            99999999999976 499999999975 7777653

>PRK07666 fabG 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional

Probab=100.00  E-value=4.1e-32  Score=226.35  Aligned_cols=193  Identities=32%  Similarity=0.513  Sum_probs=172.3

Q ss_pred             cCCCCCEEEEcCCCChHHHHHHHHHHHcCCeEEEEeCCcchHHHHHHHHHhhCCCcEEEEEccCCCHHHHHHHHHHHHhH
Q 044010           43 EDVSGKVVIITGASSGIGEHLAYEYARRGACLALCARREKSLEEVADTAREIGSPDVITIRADVSKVDDCRSLVEETMNH  122 (248)
Q Consensus        43 ~~~~~k~~lVtGg~~gIG~aia~~l~~~G~~V~l~~r~~~~~~~~~~~l~~~~~~~v~~~~~D~~~~~~~~~~~~~~~~~  122 (248)
                      +++++|+++||||++|||.+++++|+++|++|++++|+.++.++..+++...+ .++.++.+|+++.++++++++++.+.
T Consensus         3 ~~~~~~~vlVtG~sg~iG~~l~~~L~~~G~~Vi~~~r~~~~~~~~~~~~~~~~-~~~~~~~~D~~~~~~~~~~~~~~~~~   81 (239)
T PRK07666          3 QSLQGKNALITGAGRGIGRAVAIALAKEGVNVGLLARTEENLKAVAEEVEAYG-VKVVIATADVSDYEEVTAAIEQLKNE   81 (239)
T ss_pred             ccCCCCEEEEEcCCchHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHHhC-CeEEEEECCCCCHHHHHHHHHHHHHH
Confidence            46789999999999999999999999999999999999888777777775543 47889999999999999999999999


Q ss_pred             cCCccEEEEccccCCcccccccCChHHHHHHHHhhhHHHHHHHHHHhhhhhhc-CCeEEEEcCccccccCCCCccchHHH
Q 044010          123 FGRLDHLVNNAGISSVALFEDIVNITDFKQIMNINFWGSVYTTRFAVPHLRYT-KGKIVVLSSAASWLTAPRMSFYNASK  201 (248)
Q Consensus       123 ~g~id~vv~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~-~g~iV~isS~~~~~~~~~~~~Y~~sK  201 (248)
                      ++++|++|||+|........+ .+.+++++.+++|+.+++.+.+.+.+.+.+. .+++|++||..+..+.++...|+++|
T Consensus        82 ~~~id~vi~~ag~~~~~~~~~-~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~iv~~ss~~~~~~~~~~~~Y~~sK  160 (239)
T PRK07666         82 LGSIDILINNAGISKFGKFLE-LDPAEWEKIIQVNLMGVYYATRAVLPSMIERQSGDIINISSTAGQKGAAVTSAYSASK  160 (239)
T ss_pred             cCCccEEEEcCccccCCCccc-CCHHHHHHHHHHHhHHHHHHHHHHHHHHHhCCCcEEEEEcchhhccCCCCCcchHHHH
Confidence            999999999999876554444 4679999999999999999999999998654 48999999999999988889999999


Q ss_pred             HHHHHHHHHHHHHhCC-CeEEEEEecCccccCccccc
Q 044010          202 AALVLFFETLRVELGS-DVGVTIVTPGFIESELTQGK  237 (248)
Q Consensus       202 aal~~l~~~la~~~~~-~i~v~~v~pg~v~T~~~~~~  237 (248)
                      ++++.++++++.++.+ ++++++|+||++.|++....
T Consensus       161 ~a~~~~~~~~a~e~~~~gi~v~~v~pg~v~t~~~~~~  197 (239)
T PRK07666        161 FGVLGLTESLMQEVRKHNIRVTALTPSTVATDMAVDL  197 (239)
T ss_pred             HHHHHHHHHHHHHhhccCcEEEEEecCcccCcchhhc
Confidence            9999999999999977 59999999999999986543

>PRK07231 fabG 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional

Probab=100.00  E-value=2.9e-32  Score=228.31  Aligned_cols=195  Identities=35%  Similarity=0.473  Sum_probs=172.5

Q ss_pred             cCCCCCEEEEcCCCChHHHHHHHHHHHcCCeEEEEeCCcchHHHHHHHHHhhCCCcEEEEEccCCCHHHHHHHHHHHHhH
Q 044010           43 EDVSGKVVIITGASSGIGEHLAYEYARRGACLALCARREKSLEEVADTAREIGSPDVITIRADVSKVDDCRSLVEETMNH  122 (248)
Q Consensus        43 ~~~~~k~~lVtGg~~gIG~aia~~l~~~G~~V~l~~r~~~~~~~~~~~l~~~~~~~v~~~~~D~~~~~~~~~~~~~~~~~  122 (248)
                      +++++|+++||||+++||.+++++|+++|++|++++|+.++.+...+.+.+  +.++.++.+|++|.++++++++++.+.
T Consensus         1 ~~~~~~~vlItGasg~iG~~l~~~l~~~G~~V~~~~r~~~~~~~~~~~~~~--~~~~~~~~~D~~~~~~~~~~~~~~~~~   78 (251)
T PRK07231          1 MRLEGKVAIVTGASSGIGEGIARRFAAEGARVVVTDRNEEAAERVAAEILA--GGRAIAVAADVSDEADVEAAVAAALER   78 (251)
T ss_pred             CCcCCcEEEEECCCChHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHhc--CCeEEEEECCCCCHHHHHHHHHHHHHH
Confidence            367899999999999999999999999999999999998877777666654  346889999999999999999999899


Q ss_pred             cCCccEEEEccccCCcccccccCChHHHHHHHHhhhHHHHHHHHHHhhhhhhc-CCeEEEEcCccccccCCCCccchHHH
Q 044010          123 FGRLDHLVNNAGISSVALFEDIVNITDFKQIMNINFWGSVYTTRFAVPHLRYT-KGKIVVLSSAASWLTAPRMSFYNASK  201 (248)
Q Consensus       123 ~g~id~vv~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~-~g~iV~isS~~~~~~~~~~~~Y~~sK  201 (248)
                      ++++|++|||+|...........+.+++++.+++|+.+++.+++.+.+.|.+. .+++|++||..+..+.++...|+.+|
T Consensus        79 ~~~~d~vi~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~iv~~sS~~~~~~~~~~~~y~~sk  158 (251)
T PRK07231         79 FGSVDILVNNAGTTHRNGPLLDVDEAEFDRIFAVNVKSPYLWTQAAVPAMRGEGGGAIVNVASTAGLRPRPGLGWYNASK  158 (251)
T ss_pred             hCCCCEEEECCCCCCCCCChhhCCHHHHHHHHhhhhHHHHHHHHHHHHHHHhcCCcEEEEEcChhhcCCCCCchHHHHHH
Confidence            99999999999975433322234779999999999999999999999998754 48999999999999999999999999


Q ss_pred             HHHHHHHHHHHHHhCC-CeEEEEEecCccccCccccccc
Q 044010          202 AALVLFFETLRVELGS-DVGVTIVTPGFIESELTQGKFL  239 (248)
Q Consensus       202 aal~~l~~~la~~~~~-~i~v~~v~pg~v~T~~~~~~~~  239 (248)
                      ++++.+++.++.++++ +|++++++||+++|++......
T Consensus       159 ~~~~~~~~~~a~~~~~~~i~v~~i~pg~~~t~~~~~~~~  197 (251)
T PRK07231        159 GAVITLTKALAAELGPDKIRVNAVAPVVVETGLLEAFMG  197 (251)
T ss_pred             HHHHHHHHHHHHHhhhhCeEEEEEEECccCCCcchhhhc
Confidence            9999999999999987 6999999999999999776544

>PRK06500 short chain dehydrogenase; Provisional

Probab=100.00  E-value=2.2e-32  Score=228.90  Aligned_cols=187  Identities=33%  Similarity=0.472  Sum_probs=165.3

Q ss_pred             CCCCCEEEEcCCCChHHHHHHHHHHHcCCeEEEEeCCcchHHHHHHHHHhhCCCcEEEEEccCCCHHHHHHHHHHHHhHc
Q 044010           44 DVSGKVVIITGASSGIGEHLAYEYARRGACLALCARREKSLEEVADTAREIGSPDVITIRADVSKVDDCRSLVEETMNHF  123 (248)
Q Consensus        44 ~~~~k~~lVtGg~~gIG~aia~~l~~~G~~V~l~~r~~~~~~~~~~~l~~~~~~~v~~~~~D~~~~~~~~~~~~~~~~~~  123 (248)
                      ++++|+++||||++|||.+++++|+++|++|++++|+.++.++..+++   + .++.++++|++|.+++.++++++.+.+
T Consensus         3 ~~~~k~vlItGasg~iG~~la~~l~~~g~~v~~~~r~~~~~~~~~~~~---~-~~~~~~~~D~~~~~~~~~~~~~~~~~~   78 (249)
T PRK06500          3 RLQGKTALITGGTSGIGLETARQFLAEGARVAITGRDPASLEAARAEL---G-ESALVIRADAGDVAAQKALAQALAEAF   78 (249)
T ss_pred             CCCCCEEEEeCCCchHHHHHHHHHHHCCCEEEEecCCHHHHHHHHHHh---C-CceEEEEecCCCHHHHHHHHHHHHHHh
Confidence            578999999999999999999999999999999999876555544333   2 367889999999999999999999999


Q ss_pred             CCccEEEEccccCCcccccccCChHHHHHHHHhhhHHHHHHHHHHhhhhhhcCCeEEEEcCccccccCCCCccchHHHHH
Q 044010          124 GRLDHLVNNAGISSVALFEDIVNITDFKQIMNINFWGSVYTTRFAVPHLRYTKGKIVVLSSAASWLTAPRMSFYNASKAA  203 (248)
Q Consensus       124 g~id~vv~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~g~iV~isS~~~~~~~~~~~~Y~~sKaa  203 (248)
                      +++|++|||||.....+..+ .+.++|++.+++|+.+++.+++++.|.|. ..+++|+++|..+..+.+...+|+++|++
T Consensus        79 ~~id~vi~~ag~~~~~~~~~-~~~~~~~~~~~~n~~~~~~l~~~~~~~~~-~~~~~i~~~S~~~~~~~~~~~~Y~~sK~a  156 (249)
T PRK06500         79 GRLDAVFINAGVAKFAPLED-WDEAMFDRSFNTNVKGPYFLIQALLPLLA-NPASIVLNGSINAHIGMPNSSVYAASKAA  156 (249)
T ss_pred             CCCCEEEECCCCCCCCChhh-CCHHHHHHHHHHHhHHHHHHHHHHHHHHh-cCCEEEEEechHhccCCCCccHHHHHHHH
Confidence            99999999999876555444 47799999999999999999999999885 45789999998888888889999999999


Q ss_pred             HHHHHHHHHHHhCC-CeEEEEEecCccccCcccc
Q 044010          204 LVLFFETLRVELGS-DVGVTIVTPGFIESELTQG  236 (248)
Q Consensus       204 l~~l~~~la~~~~~-~i~v~~v~pg~v~T~~~~~  236 (248)
                      +++++++++.|+++ +|++++|+||+++|++...
T Consensus       157 ~~~~~~~la~e~~~~gi~v~~i~pg~~~t~~~~~  190 (249)
T PRK06500        157 LLSLAKTLSGELLPRGIRVNAVSPGPVQTPLYGK  190 (249)
T ss_pred             HHHHHHHHHHHhhhcCeEEEEEeeCcCCCHHHHh
Confidence            99999999999976 4999999999999998654

>PRK07832 short chain dehydrogenase; Provisional

Probab=100.00  E-value=2.9e-32  Score=231.78  Aligned_cols=188  Identities=29%  Similarity=0.444  Sum_probs=167.6

Q ss_pred             CEEEEcCCCChHHHHHHHHHHHcCCeEEEEeCCcchHHHHHHHHHhhCCCcEEEEEccCCCHHHHHHHHHHHHhHcCCcc
Q 044010           48 KVVIITGASSGIGEHLAYEYARRGACLALCARREKSLEEVADTAREIGSPDVITIRADVSKVDDCRSLVEETMNHFGRLD  127 (248)
Q Consensus        48 k~~lVtGg~~gIG~aia~~l~~~G~~V~l~~r~~~~~~~~~~~l~~~~~~~v~~~~~D~~~~~~~~~~~~~~~~~~g~id  127 (248)
                      |+++||||++|||.+++++|+++|++|++++|+.+..++..++++..+.....++.+|++|.++++++++++.+.++++|
T Consensus         1 k~vlItGas~giG~~la~~la~~G~~vv~~~r~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~id   80 (272)
T PRK07832          1 KRCFVTGAASGIGRATALRLAAQGAELFLTDRDADGLAQTVADARALGGTVPEHRALDISDYDAVAAFAADIHAAHGSMD   80 (272)
T ss_pred             CEEEEeCCCCHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcCCCcceEEEeeCCCHHHHHHHHHHHHHhcCCCC
Confidence            57999999999999999999999999999999988877777777765543456689999999999999999999999999


Q ss_pred             EEEEccccCCcccccccCChHHHHHHHHhhhHHHHHHHHHHhhhhhhc--CCeEEEEcCccccccCCCCccchHHHHHHH
Q 044010          128 HLVNNAGISSVALFEDIVNITDFKQIMNINFWGSVYTTRFAVPHLRYT--KGKIVVLSSAASWLTAPRMSFYNASKAALV  205 (248)
Q Consensus       128 ~vv~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~--~g~iV~isS~~~~~~~~~~~~Y~~sKaal~  205 (248)
                      ++|||+|.....+..+ .+.+++++.+++|+.+++.+++.+.|.|.+.  +|+||++||..+..+.+...+|+++|++++
T Consensus        81 ~lv~~ag~~~~~~~~~-~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~~g~ii~isS~~~~~~~~~~~~Y~~sK~a~~  159 (272)
T PRK07832         81 VVMNIAGISAWGTVDR-LTHEQWRRMVDVNLMGPIHVIETFVPPMVAAGRGGHLVNVSSAAGLVALPWHAAYSASKFGLR  159 (272)
T ss_pred             EEEECCCCCCCCcccc-CCHHHHHHHHHHHhHHHHHHHHHHHHHHHhCCCCcEEEEEccccccCCCCCCcchHHHHHHHH
Confidence            9999999876555544 5789999999999999999999999998643  489999999988888888999999999999


Q ss_pred             HHHHHHHHHhCC-CeEEEEEecCccccCcccc
Q 044010          206 LFFETLRVELGS-DVGVTIVTPGFIESELTQG  236 (248)
Q Consensus       206 ~l~~~la~~~~~-~i~v~~v~pg~v~T~~~~~  236 (248)
                      +++++++.|+.+ +|+|++|+||.++|++.++
T Consensus       160 ~~~~~l~~e~~~~~i~v~~v~Pg~v~t~~~~~  191 (272)
T PRK07832        160 GLSEVLRFDLARHGIGVSVVVPGAVKTPLVNT  191 (272)
T ss_pred             HHHHHHHHHhhhcCcEEEEEecCcccCcchhc
Confidence            999999999976 4999999999999998764

>PRK09072 short chain dehydrogenase; Provisional

Probab=100.00  E-value=4.5e-32  Score=229.42  Aligned_cols=190  Identities=30%  Similarity=0.396  Sum_probs=169.1

Q ss_pred             cCCCCCEEEEcCCCChHHHHHHHHHHHcCCeEEEEeCCcchHHHHHHHHHhhCCCcEEEEEccCCCHHHHHHHHHHHHhH
Q 044010           43 EDVSGKVVIITGASSGIGEHLAYEYARRGACLALCARREKSLEEVADTAREIGSPDVITIRADVSKVDDCRSLVEETMNH  122 (248)
Q Consensus        43 ~~~~~k~~lVtGg~~gIG~aia~~l~~~G~~V~l~~r~~~~~~~~~~~l~~~~~~~v~~~~~D~~~~~~~~~~~~~~~~~  122 (248)
                      +++++|+++||||++|||.+++++|+++|++|++++|+.++.++..+++ +. +.++.++.+|++|.++++++++.+.+ 
T Consensus         1 m~~~~~~vlItG~s~~iG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~-~~-~~~~~~~~~D~~d~~~~~~~~~~~~~-   77 (263)
T PRK09072          1 MDLKDKRVLLTGASGGIGQALAEALAAAGARLLLVGRNAEKLEALAARL-PY-PGRHRWVVADLTSEAGREAVLARARE-   77 (263)
T ss_pred             CCCCCCEEEEECCCchHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHH-hc-CCceEEEEccCCCHHHHHHHHHHHHh-
Confidence            4678999999999999999999999999999999999988877776666 22 34788999999999999999999876 


Q ss_pred             cCCccEEEEccccCCcccccccCChHHHHHHHHhhhHHHHHHHHHHhhhhhhc-CCeEEEEcCccccccCCCCccchHHH
Q 044010          123 FGRLDHLVNNAGISSVALFEDIVNITDFKQIMNINFWGSVYTTRFAVPHLRYT-KGKIVVLSSAASWLTAPRMSFYNASK  201 (248)
Q Consensus       123 ~g~id~vv~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~-~g~iV~isS~~~~~~~~~~~~Y~~sK  201 (248)
                      ++++|++|||||.....+..+ .+.+++++.+++|+.+++.+++.+.+.|.++ .+++|++||..+..+.++...|+++|
T Consensus        78 ~~~id~lv~~ag~~~~~~~~~-~~~~~~~~~~~~n~~g~~~l~~~~~~~~~~~~~~~iv~isS~~~~~~~~~~~~Y~~sK  156 (263)
T PRK09072         78 MGGINVLINNAGVNHFALLED-QDPEAIERLLALNLTAPMQLTRALLPLLRAQPSAMVVNVGSTFGSIGYPGYASYCASK  156 (263)
T ss_pred             cCCCCEEEECCCCCCcccccc-CCHHHHHHHHhhhhHHHHHHHHHHHHHHHhcCCCEEEEecChhhCcCCCCccHHHHHH
Confidence            789999999999876555544 4779999999999999999999999998755 48999999999988888899999999


Q ss_pred             HHHHHHHHHHHHHhCC-CeEEEEEecCccccCcccc
Q 044010          202 AALVLFFETLRVELGS-DVGVTIVTPGFIESELTQG  236 (248)
Q Consensus       202 aal~~l~~~la~~~~~-~i~v~~v~pg~v~T~~~~~  236 (248)
                      +++.+++++++.++.+ +|+|++|+||+++|++...
T Consensus       157 ~a~~~~~~~l~~~~~~~~i~v~~v~Pg~~~t~~~~~  192 (263)
T PRK09072        157 FALRGFSEALRRELADTGVRVLYLAPRATRTAMNSE  192 (263)
T ss_pred             HHHHHHHHHHHHHhcccCcEEEEEecCcccccchhh
Confidence            9999999999999976 5999999999999998654

>PRK06949 short chain dehydrogenase; Provisional

Probab=100.00  E-value=3.4e-32  Score=229.06  Aligned_cols=193  Identities=28%  Similarity=0.503  Sum_probs=171.7

Q ss_pred             CCCCCEEEEcCCCChHHHHHHHHHHHcCCeEEEEeCCcchHHHHHHHHHhhCCCcEEEEEccCCCHHHHHHHHHHHHhHc
Q 044010           44 DVSGKVVIITGASSGIGEHLAYEYARRGACLALCARREKSLEEVADTAREIGSPDVITIRADVSKVDDCRSLVEETMNHF  123 (248)
Q Consensus        44 ~~~~k~~lVtGg~~gIG~aia~~l~~~G~~V~l~~r~~~~~~~~~~~l~~~~~~~v~~~~~D~~~~~~~~~~~~~~~~~~  123 (248)
                      ++++|+++||||++|||.+++++|+++|++|++++|+.++.++..++++..+. ++.++.+|+++.++++++++++.+.+
T Consensus         6 ~~~~k~ilItGasg~IG~~~a~~l~~~G~~Vi~~~r~~~~~~~~~~~l~~~~~-~~~~~~~D~~~~~~~~~~~~~~~~~~   84 (258)
T PRK06949          6 NLEGKVALVTGASSGLGARFAQVLAQAGAKVVLASRRVERLKELRAEIEAEGG-AAHVVSLDVTDYQSIKAAVAHAETEA   84 (258)
T ss_pred             CCCCCEEEEECCCcHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcCC-cEEEEEecCCCHHHHHHHHHHHHHhc
Confidence            58899999999999999999999999999999999999888877777765543 68899999999999999999999999


Q ss_pred             CCccEEEEccccCCcccccccCChHHHHHHHHhhhHHHHHHHHHHhhhhhhc---------CCeEEEEcCccccccCCCC
Q 044010          124 GRLDHLVNNAGISSVALFEDIVNITDFKQIMNINFWGSVYTTRFAVPHLRYT---------KGKIVVLSSAASWLTAPRM  194 (248)
Q Consensus       124 g~id~vv~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~---------~g~iV~isS~~~~~~~~~~  194 (248)
                      +++|++|||+|.....+..+ .+.++|+.++++|+.+++.+.+++.+.|.+.         .|++|++||..+..+.+..
T Consensus        85 ~~~d~li~~ag~~~~~~~~~-~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~iv~~sS~~~~~~~~~~  163 (258)
T PRK06949         85 GTIDILVNNSGVSTTQKLVD-VTPADFDFVFDTNTRGAFFVAQEVAKRMIARAKGAGNTKPGGRIINIASVAGLRVLPQI  163 (258)
T ss_pred             CCCCEEEECCCCCCCCCccc-CCHHHHHHHHhhcchhhHHHHHHHHHHHHhcCCcCCCCCCCeEEEEECcccccCCCCCc
Confidence            99999999999865554444 4678999999999999999999999987533         3799999999988888888


Q ss_pred             ccchHHHHHHHHHHHHHHHHhCC-CeEEEEEecCccccCcccccc
Q 044010          195 SFYNASKAALVLFFETLRVELGS-DVGVTIVTPGFIESELTQGKF  238 (248)
Q Consensus       195 ~~Y~~sKaal~~l~~~la~~~~~-~i~v~~v~pg~v~T~~~~~~~  238 (248)
                      .+|+++|++++++++.++.++++ +++|++|+||.++|++....+
T Consensus       164 ~~Y~~sK~a~~~~~~~la~~~~~~~i~v~~v~pG~v~t~~~~~~~  208 (258)
T PRK06949        164 GLYCMSKAAVVHMTRAMALEWGRHGINVNAICPGYIDTEINHHHW  208 (258)
T ss_pred             cHHHHHHHHHHHHHHHHHHHHHhcCeEEEEEeeCCCcCCcchhcc
Confidence            99999999999999999999977 499999999999999976543

>PRK12937 short chain dehydrogenase; Provisional

Probab=100.00  E-value=5.6e-32  Score=225.94  Aligned_cols=190  Identities=33%  Similarity=0.468  Sum_probs=166.6

Q ss_pred             cCCCCCEEEEcCCCChHHHHHHHHHHHcCCeEEEEeCCcc-hHHHHHHHHHhhCCCcEEEEEccCCCHHHHHHHHHHHHh
Q 044010           43 EDVSGKVVIITGASSGIGEHLAYEYARRGACLALCARREK-SLEEVADTAREIGSPDVITIRADVSKVDDCRSLVEETMN  121 (248)
Q Consensus        43 ~~~~~k~~lVtGg~~gIG~aia~~l~~~G~~V~l~~r~~~-~~~~~~~~l~~~~~~~v~~~~~D~~~~~~~~~~~~~~~~  121 (248)
                      +++++|+++||||++|||++++++|+++|++|+++.|+.+ ..++..+++.+.+ .++.++.+|+++.++++++++++.+
T Consensus         1 ~~~~~~~vlItG~~~~iG~~la~~l~~~g~~v~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~Dl~~~~~~~~~~~~~~~   79 (245)
T PRK12937          1 MTLSNKVAIVTGASRGIGAAIARRLAADGFAVAVNYAGSAAAADELVAEIEAAG-GRAIAVQADVADAAAVTRLFDAAET   79 (245)
T ss_pred             CCCCCCEEEEeCCCchHHHHHHHHHHHCCCEEEEecCCCHHHHHHHHHHHHhcC-CeEEEEECCCCCHHHHHHHHHHHHH
Confidence            4678999999999999999999999999999988877543 3455556665544 4788999999999999999999999


Q ss_pred             HcCCccEEEEccccCCcccccccCChHHHHHHHHhhhHHHHHHHHHHhhhhhhcCCeEEEEcCccccccCCCCccchHHH
Q 044010          122 HFGRLDHLVNNAGISSVALFEDIVNITDFKQIMNINFWGSVYTTRFAVPHLRYTKGKIVVLSSAASWLTAPRMSFYNASK  201 (248)
Q Consensus       122 ~~g~id~vv~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~g~iV~isS~~~~~~~~~~~~Y~~sK  201 (248)
                      +++++|++|||||.....+..+ .+.+++++++++|+.+++.+++++.+.|. .+|++|++||..+..+.++...|+++|
T Consensus        80 ~~~~id~vi~~ag~~~~~~~~~-~~~~~~~~~~~~n~~~~~~~~~~~~~~~~-~~~~iv~~ss~~~~~~~~~~~~Y~~sK  157 (245)
T PRK12937         80 AFGRIDVLVNNAGVMPLGTIAD-FDLEDFDRTIATNLRGAFVVLREAARHLG-QGGRIINLSTSVIALPLPGYGPYAASK  157 (245)
T ss_pred             HcCCCCEEEECCCCCCCCChhh-CCHHHHHHHHhhhchHHHHHHHHHHHHhc-cCcEEEEEeeccccCCCCCCchhHHHH
Confidence            9999999999999875544444 46789999999999999999999999986 458999999999888888999999999


Q ss_pred             HHHHHHHHHHHHHhCC-CeEEEEEecCccccCccc
Q 044010          202 AALVLFFETLRVELGS-DVGVTIVTPGFIESELTQ  235 (248)
Q Consensus       202 aal~~l~~~la~~~~~-~i~v~~v~pg~v~T~~~~  235 (248)
                      ++++.++++++.++++ ++++++|+||+++|+|..
T Consensus       158 ~a~~~~~~~~a~~~~~~~i~v~~i~pg~~~t~~~~  192 (245)
T PRK12937        158 AAVEGLVHVLANELRGRGITVNAVAPGPVATELFF  192 (245)
T ss_pred             HHHHHHHHHHHHHhhhcCeEEEEEEeCCccCchhc
Confidence            9999999999999987 499999999999999853

>PRK08642 fabG 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional

Probab=100.00  E-value=5.7e-32  Score=226.94  Aligned_cols=189  Identities=26%  Similarity=0.401  Sum_probs=158.5

Q ss_pred             cCCCCCEEEEcCCCChHHHHHHHHHHHcCCeEEEEeCC-cchHHHHHHHHHhhCCCcEEEEEccCCCHHHHHHHHHHHHh
Q 044010           43 EDVSGKVVIITGASSGIGEHLAYEYARRGACLALCARR-EKSLEEVADTAREIGSPDVITIRADVSKVDDCRSLVEETMN  121 (248)
Q Consensus        43 ~~~~~k~~lVtGg~~gIG~aia~~l~~~G~~V~l~~r~-~~~~~~~~~~l~~~~~~~v~~~~~D~~~~~~~~~~~~~~~~  121 (248)
                      |.+++|+++||||++|||++++++|+++|++|++..++ .++.+...+++    +.++.++.+|++|.++++++++++.+
T Consensus         1 ~~l~~k~ilItGas~gIG~~la~~l~~~G~~vv~~~~~~~~~~~~~~~~~----~~~~~~~~~D~~~~~~~~~~~~~~~~   76 (253)
T PRK08642          1 MQISEQTVLVTGGSRGLGAAIARAFAREGARVVVNYHQSEDAAEALADEL----GDRAIALQADVTDREQVQAMFATATE   76 (253)
T ss_pred             CCCCCCEEEEeCCCCcHHHHHHHHHHHCCCeEEEEcCCCHHHHHHHHHHh----CCceEEEEcCCCCHHHHHHHHHHHHH
Confidence            45788999999999999999999999999999887654 33333332222    24788899999999999999999999


Q ss_pred             HcCC-ccEEEEccccCC------cccccccCChHHHHHHHHhhhHHHHHHHHHHhhhhhhc-CCeEEEEcCccccccCCC
Q 044010          122 HFGR-LDHLVNNAGISS------VALFEDIVNITDFKQIMNINFWGSVYTTRFAVPHLRYT-KGKIVVLSSAASWLTAPR  193 (248)
Q Consensus       122 ~~g~-id~vv~~ag~~~------~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~-~g~iV~isS~~~~~~~~~  193 (248)
                      .+|. +|++|||||...      ..+.. ..+.+++++.+++|+.+++.+++.+.|.|.+. .|+||++||..+..+.++
T Consensus        77 ~~g~~id~li~~ag~~~~~~~~~~~~~~-~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~g~iv~iss~~~~~~~~~  155 (253)
T PRK08642         77 HFGKPITTVVNNALADFSFDGDARKKAD-DITWEDFQQQLEGSVKGALNTIQAALPGMREQGFGRIINIGTNLFQNPVVP  155 (253)
T ss_pred             HhCCCCeEEEECCCccccccccCCCCcc-cCCHHHHHHHHhhhhhHHHHHHHHHHHHHHhcCCeEEEEECCccccCCCCC
Confidence            8887 999999998642      12233 35779999999999999999999999998644 489999999877777777


Q ss_pred             CccchHHHHHHHHHHHHHHHHhCCC-eEEEEEecCccccCcccc
Q 044010          194 MSFYNASKAALVLFFETLRVELGSD-VGVTIVTPGFIESELTQG  236 (248)
Q Consensus       194 ~~~Y~~sKaal~~l~~~la~~~~~~-i~v~~v~pg~v~T~~~~~  236 (248)
                      +..|++||++++++++++++++++. ||||+|+||+++|+....
T Consensus       156 ~~~Y~~sK~a~~~l~~~la~~~~~~~i~v~~i~pG~v~t~~~~~  199 (253)
T PRK08642        156 YHDYTTAKAALLGLTRNLAAELGPYGITVNMVSGGLLRTTDASA  199 (253)
T ss_pred             ccchHHHHHHHHHHHHHHHHHhCccCeEEEEEeecccCCchhhc
Confidence            8899999999999999999999874 999999999999986543

>PRK07454 short chain dehydrogenase; Provisional

Probab=100.00  E-value=4.5e-32  Score=226.40  Aligned_cols=189  Identities=31%  Similarity=0.409  Sum_probs=169.1

Q ss_pred             CCCEEEEcCCCChHHHHHHHHHHHcCCeEEEEeCCcchHHHHHHHHHhhCCCcEEEEEccCCCHHHHHHHHHHHHhHcCC
Q 044010           46 SGKVVIITGASSGIGEHLAYEYARRGACLALCARREKSLEEVADTAREIGSPDVITIRADVSKVDDCRSLVEETMNHFGR  125 (248)
Q Consensus        46 ~~k~~lVtGg~~gIG~aia~~l~~~G~~V~l~~r~~~~~~~~~~~l~~~~~~~v~~~~~D~~~~~~~~~~~~~~~~~~g~  125 (248)
                      ++|+++||||+++||++++++|+++|++|++++|++++.++..+++++.+ .++.++.+|+++.+++.++++++.+++++
T Consensus         5 ~~k~vlItG~sg~iG~~la~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~-~~~~~~~~D~~~~~~~~~~~~~~~~~~~~   83 (241)
T PRK07454          5 SMPRALITGASSGIGKATALAFAKAGWDLALVARSQDALEALAAELRSTG-VKAAAYSIDLSNPEAIAPGIAELLEQFGC   83 (241)
T ss_pred             CCCEEEEeCCCchHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhCC-CcEEEEEccCCCHHHHHHHHHHHHHHcCC
Confidence            46899999999999999999999999999999999887777777676544 37889999999999999999999999999


Q ss_pred             ccEEEEccccCCcccccccCChHHHHHHHHhhhHHHHHHHHHHhhhhhhc-CCeEEEEcCccccccCCCCccchHHHHHH
Q 044010          126 LDHLVNNAGISSVALFEDIVNITDFKQIMNINFWGSVYTTRFAVPHLRYT-KGKIVVLSSAASWLTAPRMSFYNASKAAL  204 (248)
Q Consensus       126 id~vv~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~-~g~iV~isS~~~~~~~~~~~~Y~~sKaal  204 (248)
                      +|++|||+|.....+..+ .+.+++++.+++|+.+++.+++.+.+.|.++ .+++|++||..+..+.++...|+++|+++
T Consensus        84 id~lv~~ag~~~~~~~~~-~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~~iv~isS~~~~~~~~~~~~Y~~sK~~~  162 (241)
T PRK07454         84 PDVLINNAGMAYTGPLLE-MPLSDWQWVIQLNLTSVFQCCSAVLPGMRARGGGLIINVSSIAARNAFPQWGAYCVSKAAL  162 (241)
T ss_pred             CCEEEECCCccCCCchhh-CCHHHHHHHHHhccHHHHHHHHHHHHHHHhcCCcEEEEEccHHhCcCCCCccHHHHHHHHH
Confidence            999999999876554444 4678999999999999999999999998654 48999999999988888899999999999


Q ss_pred             HHHHHHHHHHhCC-CeEEEEEecCccccCcccc
Q 044010          205 VLFFETLRVELGS-DVGVTIVTPGFIESELTQG  236 (248)
Q Consensus       205 ~~l~~~la~~~~~-~i~v~~v~pg~v~T~~~~~  236 (248)
                      +.++++++.++.+ ++++++|.||+++|++...
T Consensus       163 ~~~~~~~a~e~~~~gi~v~~i~pg~i~t~~~~~  195 (241)
T PRK07454        163 AAFTKCLAEEERSHGIRVCTITLGAVNTPLWDT  195 (241)
T ss_pred             HHHHHHHHHHhhhhCCEEEEEecCcccCCcccc
Confidence            9999999999976 5999999999999998653

>PRK08251 short chain dehydrogenase; Provisional

Probab=100.00  E-value=6.9e-32  Score=226.07  Aligned_cols=190  Identities=32%  Similarity=0.429  Sum_probs=168.7

Q ss_pred             CCEEEEcCCCChHHHHHHHHHHHcCCeEEEEeCCcchHHHHHHHHHhhC-CCcEEEEEccCCCHHHHHHHHHHHHhHcCC
Q 044010           47 GKVVIITGASSGIGEHLAYEYARRGACLALCARREKSLEEVADTAREIG-SPDVITIRADVSKVDDCRSLVEETMNHFGR  125 (248)
Q Consensus        47 ~k~~lVtGg~~gIG~aia~~l~~~G~~V~l~~r~~~~~~~~~~~l~~~~-~~~v~~~~~D~~~~~~~~~~~~~~~~~~g~  125 (248)
                      +|+++||||++|||++++++|+++|++|++++|+.++.++..+.+.+.. +.++.++.+|+++.++++++++++.+++++
T Consensus         2 ~k~vlItGas~giG~~la~~l~~~g~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~   81 (248)
T PRK08251          2 RQKILITGASSGLGAGMAREFAAKGRDLALCARRTDRLEELKAELLARYPGIKVAVAALDVNDHDQVFEVFAEFRDELGG   81 (248)
T ss_pred             CCEEEEECCCCHHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHHHHhhCCCceEEEEEcCCCCHHHHHHHHHHHHHHcCC
Confidence            6899999999999999999999999999999999888877777766543 347889999999999999999999999999


Q ss_pred             ccEEEEccccCCcccccccCChHHHHHHHHhhhHHHHHHHHHHhhhhhhc-CCeEEEEcCccccccCCC-CccchHHHHH
Q 044010          126 LDHLVNNAGISSVALFEDIVNITDFKQIMNINFWGSVYTTRFAVPHLRYT-KGKIVVLSSAASWLTAPR-MSFYNASKAA  203 (248)
Q Consensus       126 id~vv~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~-~g~iV~isS~~~~~~~~~-~~~Y~~sKaa  203 (248)
                      +|++|||||+.......+ .+.+.+++.+++|+.+++.+++.+.|.|++. .+++|++||..+..+.+. ..+|+.||++
T Consensus        82 id~vi~~ag~~~~~~~~~-~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~~iv~~sS~~~~~~~~~~~~~Y~~sK~a  160 (248)
T PRK08251         82 LDRVIVNAGIGKGARLGT-GKFWANKATAETNFVAALAQCEAAMEIFREQGSGHLVLISSVSAVRGLPGVKAAYAASKAG  160 (248)
T ss_pred             CCEEEECCCcCCCCCcCc-CCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcCCCeEEEEeccccccCCCCCcccHHHHHHH
Confidence            999999999876655444 4678899999999999999999999998754 489999999988887774 6899999999


Q ss_pred             HHHHHHHHHHHhCC-CeEEEEEecCccccCccccc
Q 044010          204 LVLFFETLRVELGS-DVGVTIVTPGFIESELTQGK  237 (248)
Q Consensus       204 l~~l~~~la~~~~~-~i~v~~v~pg~v~T~~~~~~  237 (248)
                      ++++++.++.++.+ ++++++|+||+++|++.+..
T Consensus       161 ~~~~~~~l~~~~~~~~i~v~~v~pg~v~t~~~~~~  195 (248)
T PRK08251        161 VASLGEGLRAELAKTPIKVSTIEPGYIRSEMNAKA  195 (248)
T ss_pred             HHHHHHHHHHHhcccCcEEEEEecCcCcchhhhcc
Confidence            99999999999976 59999999999999998754

>KOG1207 consensus Diacetyl reductase/L-xylulose reductase [Secondary metabolites biosynthesis, transport and catabolism]

Probab=100.00  E-value=4.8e-34  Score=219.32  Aligned_cols=193  Identities=27%  Similarity=0.421  Sum_probs=168.4

Q ss_pred             ccCCCCCEEEEcCCCChHHHHHHHHHHHcCCeEEEEeCCcchHHHHHHHHHhhCCCcEEEEEccCCCHHHHHHHHHHHHh
Q 044010           42 SEDVSGKVVIITGASSGIGEHLAYEYARRGACLALCARREKSLEEVADTAREIGSPDVITIRADVSKVDDCRSLVEETMN  121 (248)
Q Consensus        42 ~~~~~~k~~lVtGg~~gIG~aia~~l~~~G~~V~l~~r~~~~~~~~~~~l~~~~~~~v~~~~~D~~~~~~~~~~~~~~~~  121 (248)
                      +.++.|+.+++||+..|||++++++|++.|++|+.++|+++.+....++.   + ..+..++.|+++++.+.+++..   
T Consensus         2 ~t~laG~~vlvTgagaGIG~~~v~~La~aGA~ViAvaR~~a~L~sLV~e~---p-~~I~Pi~~Dls~wea~~~~l~~---   74 (245)
T KOG1207|consen    2 KTSLAGVIVLVTGAGAGIGKEIVLSLAKAGAQVIAVARNEANLLSLVKET---P-SLIIPIVGDLSAWEALFKLLVP---   74 (245)
T ss_pred             cccccceEEEeecccccccHHHHHHHHhcCCEEEEEecCHHHHHHHHhhC---C-cceeeeEecccHHHHHHHhhcc---
Confidence            45789999999999999999999999999999999999998776665543   2 2578899999998877766654   


Q ss_pred             HcCCccEEEEccccCCcccccccCChHHHHHHHHhhhHHHHHHHHHHhhhh-hh-cCCeEEEEcCccccccCCCCccchH
Q 044010          122 HFGRLDHLVNNAGISSVALFEDIVNITDFKQIMNINFWGSVYTTRFAVPHL-RY-TKGKIVVLSSAASWLTAPRMSFYNA  199 (248)
Q Consensus       122 ~~g~id~vv~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~-~~-~~g~iV~isS~~~~~~~~~~~~Y~~  199 (248)
                       .+.+|.+|||||+....++.+. +.+++++.|++|+.+.+++.|.....+ .+ .+|.||++||.++.++..++..|++
T Consensus        75 -v~pidgLVNNAgvA~~~pf~ei-T~q~fDr~F~VNvravi~v~Q~var~lv~R~~~GaIVNvSSqas~R~~~nHtvYca  152 (245)
T KOG1207|consen   75 -VFPIDGLVNNAGVATNHPFGEI-TQQSFDRTFAVNVRAVILVAQLVARNLVDRQIKGAIVNVSSQASIRPLDNHTVYCA  152 (245)
T ss_pred             -cCchhhhhccchhhhcchHHHH-hHHhhcceeeeeeeeeeeHHHHHHHhhhhccCCceEEEecchhcccccCCceEEee
Confidence             4689999999999988877774 679999999999999999999966543 22 3589999999999999999999999


Q ss_pred             HHHHHHHHHHHHHHHhCCC-eEEEEEecCccccCccccccccccc
Q 044010          200 SKAALVLFFETLRVELGSD-VGVTIVTPGFIESELTQGKFLTGRR  243 (248)
Q Consensus       200 sKaal~~l~~~la~~~~~~-i~v~~v~pg~v~T~~~~~~~~~~~~  243 (248)
                      +|+|++.++|++|.|++|. ||||+|.|-.|.|+|-+..|.+.+.
T Consensus       153 tKaALDmlTk~lAlELGp~kIRVNsVNPTVVmT~MG~dnWSDP~K  197 (245)
T KOG1207|consen  153 TKAALDMLTKCLALELGPQKIRVNSVNPTVVMTDMGRDNWSDPDK  197 (245)
T ss_pred             cHHHHHHHHHHHHHhhCcceeEeeccCCeEEEecccccccCCchh
Confidence            9999999999999999995 9999999999999999988876553

>PRK12744 short chain dehydrogenase; Provisional

Probab=100.00  E-value=5.8e-32  Score=227.99  Aligned_cols=190  Identities=25%  Similarity=0.392  Sum_probs=158.2

Q ss_pred             cCCCCCEEEEcCCCChHHHHHHHHHHHcCCeEEEEeCCc----chHHHHHHHHHhhCCCcEEEEEccCCCHHHHHHHHHH
Q 044010           43 EDVSGKVVIITGASSGIGEHLAYEYARRGACLALCARRE----KSLEEVADTAREIGSPDVITIRADVSKVDDCRSLVEE  118 (248)
Q Consensus        43 ~~~~~k~~lVtGg~~gIG~aia~~l~~~G~~V~l~~r~~----~~~~~~~~~l~~~~~~~v~~~~~D~~~~~~~~~~~~~  118 (248)
                      .++++|+++||||++|||.++|++|+++|++|+++.++.    +..++..++++..+ .++.++.+|+++.+++++++++
T Consensus         4 ~~l~~k~vlItGa~~gIG~~~a~~l~~~G~~vv~i~~~~~~~~~~~~~~~~~l~~~~-~~~~~~~~D~~~~~~~~~~~~~   82 (257)
T PRK12744          4 HSLKGKVVLIAGGAKNLGGLIARDLAAQGAKAVAIHYNSAASKADAEETVAAVKAAG-AKAVAFQADLTTAAAVEKLFDD   82 (257)
T ss_pred             CCCCCcEEEEECCCchHHHHHHHHHHHCCCcEEEEecCCccchHHHHHHHHHHHHhC-CcEEEEecCcCCHHHHHHHHHH
Confidence            357899999999999999999999999999976666533    33444445554443 3788899999999999999999


Q ss_pred             HHhHcCCccEEEEccccCCcccccccCChHHHHHHHHhhhHHHHHHHHHHhhhhhhcCCeEEEE-cCccccccCCCCccc
Q 044010          119 TMNHFGRLDHLVNNAGISSVALFEDIVNITDFKQIMNINFWGSVYTTRFAVPHLRYTKGKIVVL-SSAASWLTAPRMSFY  197 (248)
Q Consensus       119 ~~~~~g~id~vv~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~g~iV~i-sS~~~~~~~~~~~~Y  197 (248)
                      +.++++++|++|||||.....+..+ .+.+++++.+++|+.+++.+++++.|.|. ..|+++++ ||..+ .+.+.+..|
T Consensus        83 ~~~~~~~id~li~~ag~~~~~~~~~-~~~~~~~~~~~~N~~~~~~~~~~~~~~~~-~~~~iv~~~ss~~~-~~~~~~~~Y  159 (257)
T PRK12744         83 AKAAFGRPDIAINTVGKVLKKPIVE-ISEAEYDEMFAVNSKSAFFFIKEAGRHLN-DNGKIVTLVTSLLG-AFTPFYSAY  159 (257)
T ss_pred             HHHhhCCCCEEEECCcccCCCCccc-CCHHHHHHHHhhhhhHHHHHHHHHHHhhc-cCCCEEEEecchhc-ccCCCcccc
Confidence            9999999999999999876555444 47789999999999999999999999986 34677776 44433 345678899


Q ss_pred             hHHHHHHHHHHHHHHHHhCCC-eEEEEEecCccccCcccc
Q 044010          198 NASKAALVLFFETLRVELGSD-VGVTIVTPGFIESELTQG  236 (248)
Q Consensus       198 ~~sKaal~~l~~~la~~~~~~-i~v~~v~pg~v~T~~~~~  236 (248)
                      ++||+|+++++++++.|+++. |+|++|+||++.|++..+
T Consensus       160 ~~sK~a~~~~~~~la~e~~~~~i~v~~v~pg~v~t~~~~~  199 (257)
T PRK12744        160 AGSKAPVEHFTRAASKEFGARGISVTAVGPGPMDTPFFYP  199 (257)
T ss_pred             hhhHHHHHHHHHHHHHHhCcCceEEEEEecCccccchhcc
Confidence            999999999999999999874 999999999999998654

>TIGR02415 23BDH acetoin reductases

Probab=100.00  E-value=5.7e-32  Score=227.23  Aligned_cols=188  Identities=26%  Similarity=0.439  Sum_probs=168.8

Q ss_pred             CEEEEcCCCChHHHHHHHHHHHcCCeEEEEeCCcchHHHHHHHHHhhCCCcEEEEEccCCCHHHHHHHHHHHHhHcCCcc
Q 044010           48 KVVIITGASSGIGEHLAYEYARRGACLALCARREKSLEEVADTAREIGSPDVITIRADVSKVDDCRSLVEETMNHFGRLD  127 (248)
Q Consensus        48 k~~lVtGg~~gIG~aia~~l~~~G~~V~l~~r~~~~~~~~~~~l~~~~~~~v~~~~~D~~~~~~~~~~~~~~~~~~g~id  127 (248)
                      |+++||||+++||.+++++|+++|++|++++|+.++.++..++++..+ .++.++.+|++|.+++.++++++.+.++++|
T Consensus         1 k~~lItG~sg~iG~~la~~l~~~G~~v~~~~r~~~~~~~~~~~l~~~~-~~~~~~~~Dl~~~~~i~~~~~~~~~~~~~id   79 (254)
T TIGR02415         1 KVALVTGGAQGIGKGIAERLAKDGFAVAVADLNEETAKETAKEINQAG-GKAVAYKLDVSDKDQVFSAIDQAAEKFGGFD   79 (254)
T ss_pred             CEEEEeCCCchHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcC-CeEEEEEcCCCCHHHHHHHHHHHHHHcCCCC
Confidence            689999999999999999999999999999999877777777776544 3788999999999999999999999999999


Q ss_pred             EEEEccccCCcccccccCChHHHHHHHHhhhHHHHHHHHHHhhhhhhc--CCeEEEEcCccccccCCCCccchHHHHHHH
Q 044010          128 HLVNNAGISSVALFEDIVNITDFKQIMNINFWGSVYTTRFAVPHLRYT--KGKIVVLSSAASWLTAPRMSFYNASKAALV  205 (248)
Q Consensus       128 ~vv~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~--~g~iV~isS~~~~~~~~~~~~Y~~sKaal~  205 (248)
                      ++|||+|.....+..+ .+.++|++.+++|+.+++.+++.+.+.|++.  ++++|++||..+..+.+.+.+|++||++++
T Consensus        80 ~vi~~ag~~~~~~~~~-~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~~~iv~~sS~~~~~~~~~~~~Y~~sK~a~~  158 (254)
T TIGR02415        80 VMVNNAGVAPITPILE-ITEEELKKVYNVNVKGVLFGIQAAARQFKKQGHGGKIINAASIAGHEGNPILSAYSSTKFAVR  158 (254)
T ss_pred             EEEECCCcCCCCCccc-CCHHHHHHHHhhhhHHHHHHHHHHHHHHHhCCCCeEEEEecchhhcCCCCCCcchHHHHHHHH
Confidence            9999999876655554 4779999999999999999999999998754  379999999999999999999999999999


Q ss_pred             HHHHHHHHHhCCC-eEEEEEecCccccCccccc
Q 044010          206 LFFETLRVELGSD-VGVTIVTPGFIESELTQGK  237 (248)
Q Consensus       206 ~l~~~la~~~~~~-i~v~~v~pg~v~T~~~~~~  237 (248)
                      +++++++.++++. |+|++|+||+++|++....
T Consensus       159 ~~~~~l~~~~~~~~i~v~~v~Pg~i~t~~~~~~  191 (254)
T TIGR02415       159 GLTQTAAQELAPKGITVNAYCPGIVKTPMWEEI  191 (254)
T ss_pred             HHHHHHHHHhcccCeEEEEEecCcccChhhhhh
Confidence            9999999999874 9999999999999997544

One member of this family, as characterized in Klebsiella terrigena, is described as able to interconvert acetoin + NADH with meso-2,3-butanediol + NAD(+). It is also called capable of irreversible reduction of diacetyl with NADH to acetoin. Blomqvist, et al. decline to specify either EC 1.1.1.4 which is (R,R)-butanediol dehydrogenase, or EC 1.1.1.5, which is acetoin dehydrogenase without a specified stereochemistry, for this enzyme. This enzyme is a homotetramer in the family of short chain dehydrogenases (pfam00106). Another member of this family, from Corynebacterium glutamicum, is called L-2,3-butanediol dehydrogenase (PubMed:11577733).

>PRK06197 short chain dehydrogenase; Provisional

Probab=100.00  E-value=1.8e-32  Score=236.97  Aligned_cols=192  Identities=25%  Similarity=0.362  Sum_probs=162.7

Q ss_pred             cCCCCCEEEEcCCCChHHHHHHHHHHHcCCeEEEEeCCcchHHHHHHHHHhhC-CCcEEEEEccCCCHHHHHHHHHHHHh
Q 044010           43 EDVSGKVVIITGASSGIGEHLAYEYARRGACLALCARREKSLEEVADTAREIG-SPDVITIRADVSKVDDCRSLVEETMN  121 (248)
Q Consensus        43 ~~~~~k~~lVtGg~~gIG~aia~~l~~~G~~V~l~~r~~~~~~~~~~~l~~~~-~~~v~~~~~D~~~~~~~~~~~~~~~~  121 (248)
                      .+++||+++||||++|||.++|++|+++|++|++++|+.++.++..+++.+.. +.++.++.+|++|.++++++++++.+
T Consensus        12 ~~~~~k~vlItGas~gIG~~~a~~l~~~G~~vi~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~Dl~d~~~v~~~~~~~~~   91 (306)
T PRK06197         12 PDQSGRVAVVTGANTGLGYETAAALAAKGAHVVLAVRNLDKGKAAAARITAATPGADVTLQELDLTSLASVRAAADALRA   91 (306)
T ss_pred             ccCCCCEEEEcCCCCcHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHHhCCCCceEEEECCCCCHHHHHHHHHHHHh
Confidence            47899999999999999999999999999999999999888777777766442 34688999999999999999999999


Q ss_pred             HcCCccEEEEccccCCcccccccCChHHHHHHHHhhhHHHHHHHHHHhhhhhhc-CCeEEEEcCccccc-----------
Q 044010          122 HFGRLDHLVNNAGISSVALFEDIVNITDFKQIMNINFWGSVYTTRFAVPHLRYT-KGKIVVLSSAASWL-----------  189 (248)
Q Consensus       122 ~~g~id~vv~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~-~g~iV~isS~~~~~-----------  189 (248)
                      +++++|++|||||...+.  .. .+.++++..+++|+.+++.+++.++|.|.+. .++||++||.++..           
T Consensus        92 ~~~~iD~li~nAg~~~~~--~~-~~~~~~~~~~~vN~~g~~~l~~~ll~~l~~~~~~~iV~vSS~~~~~~~~~~~~~~~~  168 (306)
T PRK06197         92 AYPRIDLLINNAGVMYTP--KQ-TTADGFELQFGTNHLGHFALTGLLLDRLLPVPGSRVVTVSSGGHRIRAAIHFDDLQW  168 (306)
T ss_pred             hCCCCCEEEECCccccCC--Cc-cCCCCcchhhhhhhHHHHHHHHHHHHHHhhCCCCEEEEECCHHHhccCCCCccccCc
Confidence            999999999999976543  12 3457899999999999999999999998754 47999999987543           


Q ss_pred             --cCCCCccchHHHHHHHHHHHHHHHHhCC-CeEEEE--EecCccccCccccc
Q 044010          190 --TAPRMSFYNASKAALVLFFETLRVELGS-DVGVTI--VTPGFIESELTQGK  237 (248)
Q Consensus       190 --~~~~~~~Y~~sKaal~~l~~~la~~~~~-~i~v~~--v~pg~v~T~~~~~~  237 (248)
                        +.++..+|++||++++.+++.+++++++ ++++++  ++||+|+|+|.++.
T Consensus       169 ~~~~~~~~~Y~~SK~a~~~~~~~la~~l~~~~i~v~~v~~~PG~v~T~~~~~~  221 (306)
T PRK06197        169 ERRYNRVAAYGQSKLANLLFTYELQRRLAAAGATTIAVAAHPGVSNTELARNL  221 (306)
T ss_pred             ccCCCcHHHHHHHHHHHHHHHHHHHHHhhcCCCCeEEEEeCCCcccCcccccC
Confidence              2334568999999999999999999965 466654  57999999997754

>PRK06484 short chain dehydrogenase; Validated

Probab=100.00  E-value=2.7e-32  Score=251.77  Aligned_cols=188  Identities=31%  Similarity=0.498  Sum_probs=166.7

Q ss_pred             CCCCCEEEEcCCCChHHHHHHHHHHHcCCeEEEEeCCcchHHHHHHHHHhhCCCcEEEEEccCCCHHHHHHHHHHHHhHc
Q 044010           44 DVSGKVVIITGASSGIGEHLAYEYARRGACLALCARREKSLEEVADTAREIGSPDVITIRADVSKVDDCRSLVEETMNHF  123 (248)
Q Consensus        44 ~~~~k~~lVtGg~~gIG~aia~~l~~~G~~V~l~~r~~~~~~~~~~~l~~~~~~~v~~~~~D~~~~~~~~~~~~~~~~~~  123 (248)
                      +.+||+++||||++|||+++|++|+++|++|++++|+.+++++..+++   + .++.++.+|++|.++++++++++.+++
T Consensus         2 ~~~~k~~lITGas~gIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~~---~-~~~~~~~~D~~~~~~~~~~~~~~~~~~   77 (520)
T PRK06484          2 KAQSRVVLVTGAAGGIGRAACQRFARAGDQVVVADRNVERARERADSL---G-PDHHALAMDVSDEAQIREGFEQLHREF   77 (520)
T ss_pred             CCCCeEEEEECCCcHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHh---C-CceeEEEeccCCHHHHHHHHHHHHHHh
Confidence            467999999999999999999999999999999999987766655444   2 367789999999999999999999999


Q ss_pred             CCccEEEEccccCCc--ccccccCChHHHHHHHHhhhHHHHHHHHHHhhhhhhcC-C-eEEEEcCccccccCCCCccchH
Q 044010          124 GRLDHLVNNAGISSV--ALFEDIVNITDFKQIMNINFWGSVYTTRFAVPHLRYTK-G-KIVVLSSAASWLTAPRMSFYNA  199 (248)
Q Consensus       124 g~id~vv~~ag~~~~--~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~-g-~iV~isS~~~~~~~~~~~~Y~~  199 (248)
                      |++|++|||||...+  .++.+ .+.++|++.+++|+.+++.++++++|.|.+++ | +||++||..+..+.++..+|++
T Consensus        78 g~iD~li~nag~~~~~~~~~~~-~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~g~~iv~isS~~~~~~~~~~~~Y~a  156 (520)
T PRK06484         78 GRIDVLVNNAGVTDPTMTATLD-TTLEEFARLQAINLTGAYLVAREALRLMIEQGHGAAIVNVASGAGLVALPKRTAYSA  156 (520)
T ss_pred             CCCCEEEECCCcCCCCCccccc-CCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcCCCCeEEEECCcccCCCCCCCchHHH
Confidence            999999999997432  33334 57799999999999999999999999996543 4 9999999999999999999999


Q ss_pred             HHHHHHHHHHHHHHHhCC-CeEEEEEecCccccCcccc
Q 044010          200 SKAALVLFFETLRVELGS-DVGVTIVTPGFIESELTQG  236 (248)
Q Consensus       200 sKaal~~l~~~la~~~~~-~i~v~~v~pg~v~T~~~~~  236 (248)
                      +|+++++++++++.|+.+ +|||++|+||+++|++...
T Consensus       157 sKaal~~l~~~la~e~~~~~i~v~~i~Pg~v~t~~~~~  194 (520)
T PRK06484        157 SKAAVISLTRSLACEWAAKGIRVNAVLPGYVRTQMVAE  194 (520)
T ss_pred             HHHHHHHHHHHHHHHhhhhCeEEEEEccCCcCchhhhh
Confidence            999999999999999987 4999999999999999754

>PRK06180 short chain dehydrogenase; Provisional

Probab=100.00  E-value=8.2e-32  Score=229.71  Aligned_cols=186  Identities=28%  Similarity=0.432  Sum_probs=164.3

Q ss_pred             CCCEEEEcCCCChHHHHHHHHHHHcCCeEEEEeCCcchHHHHHHHHHhhCCCcEEEEEccCCCHHHHHHHHHHHHhHcCC
Q 044010           46 SGKVVIITGASSGIGEHLAYEYARRGACLALCARREKSLEEVADTAREIGSPDVITIRADVSKVDDCRSLVEETMNHFGR  125 (248)
Q Consensus        46 ~~k~~lVtGg~~gIG~aia~~l~~~G~~V~l~~r~~~~~~~~~~~l~~~~~~~v~~~~~D~~~~~~~~~~~~~~~~~~g~  125 (248)
                      .+|+++||||+||||.+++++|+++|++|++++|+.++.+...+    ..+.++..+.+|++|.+++.++++++.+.+++
T Consensus         3 ~~~~vlVtGasggiG~~la~~l~~~G~~V~~~~r~~~~~~~l~~----~~~~~~~~~~~D~~d~~~~~~~~~~~~~~~~~   78 (277)
T PRK06180          3 SMKTWLITGVSSGFGRALAQAALAAGHRVVGTVRSEAARADFEA----LHPDRALARLLDVTDFDAIDAVVADAEATFGP   78 (277)
T ss_pred             CCCEEEEecCCChHHHHHHHHHHhCcCEEEEEeCCHHHHHHHHh----hcCCCeeEEEccCCCHHHHHHHHHHHHHHhCC
Confidence            57899999999999999999999999999999998765544332    23346788999999999999999999999999


Q ss_pred             ccEEEEccccCCcccccccCChHHHHHHHHhhhHHHHHHHHHHhhhhhhc-CCeEEEEcCccccccCCCCccchHHHHHH
Q 044010          126 LDHLVNNAGISSVALFEDIVNITDFKQIMNINFWGSVYTTRFAVPHLRYT-KGKIVVLSSAASWLTAPRMSFYNASKAAL  204 (248)
Q Consensus       126 id~vv~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~-~g~iV~isS~~~~~~~~~~~~Y~~sKaal  204 (248)
                      +|++|||||.....+..+ .+.++|++.+++|+.+++++.+.++|.|++. .++||++||..+..+.++..+|+++|+++
T Consensus        79 ~d~vv~~ag~~~~~~~~~-~~~~~~~~~~~~n~~g~~~l~~~~~~~~~~~~~~~iv~iSS~~~~~~~~~~~~Y~~sK~a~  157 (277)
T PRK06180         79 IDVLVNNAGYGHEGAIEE-SPLAEMRRQFEVNVFGAVAMTKAVLPGMRARRRGHIVNITSMGGLITMPGIGYYCGSKFAL  157 (277)
T ss_pred             CCEEEECCCccCCccccc-CCHHHHHHHHHHHhHHHHHHHHHHHHHHhccCCCEEEEEecccccCCCCCcchhHHHHHHH
Confidence            999999999876555554 4678999999999999999999999998754 48999999999998889999999999999


Q ss_pred             HHHHHHHHHHhCC-CeEEEEEecCccccCcccc
Q 044010          205 VLFFETLRVELGS-DVGVTIVTPGFIESELTQG  236 (248)
Q Consensus       205 ~~l~~~la~~~~~-~i~v~~v~pg~v~T~~~~~  236 (248)
                      ++++++++.++++ ++++++|.||.++|++...
T Consensus       158 ~~~~~~la~e~~~~gi~v~~i~Pg~v~t~~~~~  190 (277)
T PRK06180        158 EGISESLAKEVAPFGIHVTAVEPGSFRTDWAGR  190 (277)
T ss_pred             HHHHHHHHHHhhhhCcEEEEEecCCcccCcccc
Confidence            9999999999976 5999999999999987543

>PRK13394 3-hydroxybutyrate dehydrogenase; Provisional

Probab=100.00  E-value=7.8e-32  Score=227.23  Aligned_cols=193  Identities=31%  Similarity=0.496  Sum_probs=172.1

Q ss_pred             cCCCCCEEEEcCCCChHHHHHHHHHHHcCCeEEEEeCCcchHHHHHHHHHhhCCCcEEEEEccCCCHHHHHHHHHHHHhH
Q 044010           43 EDVSGKVVIITGASSGIGEHLAYEYARRGACLALCARREKSLEEVADTAREIGSPDVITIRADVSKVDDCRSLVEETMNH  122 (248)
Q Consensus        43 ~~~~~k~~lVtGg~~gIG~aia~~l~~~G~~V~l~~r~~~~~~~~~~~l~~~~~~~v~~~~~D~~~~~~~~~~~~~~~~~  122 (248)
                      .++++|++|||||+++||.+++++|+++|++|++++|++++.++..+++++.+ .++.++++|++|.++++++++++.++
T Consensus         3 ~~~~~~~vlItGasg~iG~~la~~l~~~G~~v~~~~r~~~~~~~~~~~~~~~~-~~~~~~~~Dl~~~~~~~~~~~~~~~~   81 (262)
T PRK13394          3 SNLNGKTAVVTGAASGIGKEIALELARAGAAVAIADLNQDGANAVADEINKAG-GKAIGVAMDVTNEDAVNAGIDKVAER   81 (262)
T ss_pred             ccCCCCEEEEECCCChHHHHHHHHHHHCCCeEEEEeCChHHHHHHHHHHHhcC-ceEEEEECCCCCHHHHHHHHHHHHHH
Confidence            36789999999999999999999999999999999999988888888776654 36888999999999999999999999


Q ss_pred             cCCccEEEEccccCCcccccccCChHHHHHHHHhhhHHHHHHHHHHhhhh-hhc-CCeEEEEcCccccccCCCCccchHH
Q 044010          123 FGRLDHLVNNAGISSVALFEDIVNITDFKQIMNINFWGSVYTTRFAVPHL-RYT-KGKIVVLSSAASWLTAPRMSFYNAS  200 (248)
Q Consensus       123 ~g~id~vv~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~-~~~-~g~iV~isS~~~~~~~~~~~~Y~~s  200 (248)
                      ++++|++|||||...+....+ .+.+++++.+++|+.+++.+++.+++.+ ++. .++||++||..+..+.+....|+++
T Consensus        82 ~~~~d~vi~~ag~~~~~~~~~-~~~~~~~~~~~~n~~~~~~~~~~~l~~~~~~~~~~~iv~~ss~~~~~~~~~~~~y~~s  160 (262)
T PRK13394         82 FGSVDILVSNAGIQIVNPIEN-YSFADWKKMQAIHVDGAFLTTKAALKHMYKDDRGGVVIYMGSVHSHEASPLKSAYVTA  160 (262)
T ss_pred             cCCCCEEEECCccCCCCchhh-CCHHHHHHHHHhhhhhHHHHHHHHHHHHHhhcCCcEEEEEcchhhcCCCCCCcccHHH
Confidence            999999999999876555544 4678999999999999999999999998 543 3899999999888888888899999


Q ss_pred             HHHHHHHHHHHHHHhCC-CeEEEEEecCccccCccccc
Q 044010          201 KAALVLFFETLRVELGS-DVGVTIVTPGFIESELTQGK  237 (248)
Q Consensus       201 Kaal~~l~~~la~~~~~-~i~v~~v~pg~v~T~~~~~~  237 (248)
                      |++++.+++.++.++.+ +|++++|.||+++|++....
T Consensus       161 k~a~~~~~~~la~~~~~~~i~v~~v~pg~v~~~~~~~~  198 (262)
T PRK13394        161 KHGLLGLARVLAKEGAKHNVRSHVVCPGFVRTPLVDKQ  198 (262)
T ss_pred             HHHHHHHHHHHHHHhhhcCeEEEEEeeCcccchhhhhh
Confidence            99999999999999976 59999999999999986544

>PRK08213 gluconate 5-dehydrogenase; Provisional

Probab=100.00  E-value=9.6e-32  Score=226.81  Aligned_cols=192  Identities=34%  Similarity=0.531  Sum_probs=167.3

Q ss_pred             CCCCCEEEEcCCCChHHHHHHHHHHHcCCeEEEEeCCcchHHHHHHHHHhhCCCcEEEEEccCCCHHHHHHHHHHHHhHc
Q 044010           44 DVSGKVVIITGASSGIGEHLAYEYARRGACLALCARREKSLEEVADTAREIGSPDVITIRADVSKVDDCRSLVEETMNHF  123 (248)
Q Consensus        44 ~~~~k~~lVtGg~~gIG~aia~~l~~~G~~V~l~~r~~~~~~~~~~~l~~~~~~~v~~~~~D~~~~~~~~~~~~~~~~~~  123 (248)
                      ++++|++|||||+++||.++|++|+++|++|++++|+.++.+...+.+.+.+ .++.++.+|++|.++++++++++.+.+
T Consensus         9 ~~~~k~ilItGa~g~IG~~la~~l~~~G~~V~~~~r~~~~~~~~~~~i~~~~-~~~~~~~~Dl~d~~~i~~~~~~~~~~~   87 (259)
T PRK08213          9 DLSGKTALVTGGSRGLGLQIAEALGEAGARVVLSARKAEELEEAAAHLEALG-IDALWIAADVADEADIERLAEETLERF   87 (259)
T ss_pred             CcCCCEEEEECCCchHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHHHHhcC-CeEEEEEccCCCHHHHHHHHHHHHHHh
Confidence            5789999999999999999999999999999999999887777776666544 367889999999999999999999999


Q ss_pred             CCccEEEEccccCCcccccccCChHHHHHHHHhhhHHHHHHHHHHhhh-hhhc-CCeEEEEcCccccccCCC----Cccc
Q 044010          124 GRLDHLVNNAGISSVALFEDIVNITDFKQIMNINFWGSVYTTRFAVPH-LRYT-KGKIVVLSSAASWLTAPR----MSFY  197 (248)
Q Consensus       124 g~id~vv~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~-~~~~-~g~iV~isS~~~~~~~~~----~~~Y  197 (248)
                      +++|++|||||.....+..+ .+.++|++.+++|+.+++.+++++.+. |.++ .+++|++||..+..+.++    ...|
T Consensus        88 ~~id~vi~~ag~~~~~~~~~-~~~~~~~~~~~~n~~~~~~l~~~~~~~~l~~~~~~~~v~~sS~~~~~~~~~~~~~~~~Y  166 (259)
T PRK08213         88 GHVDILVNNAGATWGAPAED-HPVEAWDKVMNLNVRGLFLLSQAVAKRSMIPRGYGRIINVASVAGLGGNPPEVMDTIAY  166 (259)
T ss_pred             CCCCEEEECCCCCCCCChhh-CCHHHHHHHHhHHhHHHHHHHHHHHHHHHHhcCCeEEEEECChhhccCCCccccCcchH
Confidence            99999999999765544444 467999999999999999999999997 6544 379999999887765543    4789


Q ss_pred             hHHHHHHHHHHHHHHHHhCC-CeEEEEEecCccccCccccc
Q 044010          198 NASKAALVLFFETLRVELGS-DVGVTIVTPGFIESELTQGK  237 (248)
Q Consensus       198 ~~sKaal~~l~~~la~~~~~-~i~v~~v~pg~v~T~~~~~~  237 (248)
                      +++|++++++++++++++++ +|++++|+||+++|++..+.
T Consensus       167 ~~sKa~~~~~~~~~a~~~~~~gi~v~~v~Pg~~~t~~~~~~  207 (259)
T PRK08213        167 NTSKGAVINFTRALAAEWGPHGIRVNAIAPGFFPTKMTRGT  207 (259)
T ss_pred             HHHHHHHHHHHHHHHHHhcccCEEEEEEecCcCCCcchhhh
Confidence            99999999999999999987 49999999999999986543

>PRK06179 short chain dehydrogenase; Provisional

Probab=100.00  E-value=4.3e-32  Score=230.27  Aligned_cols=182  Identities=32%  Similarity=0.502  Sum_probs=163.3

Q ss_pred             CCCEEEEcCCCChHHHHHHHHHHHcCCeEEEEeCCcchHHHHHHHHHhhCCCcEEEEEccCCCHHHHHHHHHHHHhHcCC
Q 044010           46 SGKVVIITGASSGIGEHLAYEYARRGACLALCARREKSLEEVADTAREIGSPDVITIRADVSKVDDCRSLVEETMNHFGR  125 (248)
Q Consensus        46 ~~k~~lVtGg~~gIG~aia~~l~~~G~~V~l~~r~~~~~~~~~~~l~~~~~~~v~~~~~D~~~~~~~~~~~~~~~~~~g~  125 (248)
                      ++|+++||||+||||++++++|+++|++|++++|+.++.+.         ..++.++.+|++|.++++++++++.+++|+
T Consensus         3 ~~~~vlVtGasg~iG~~~a~~l~~~g~~V~~~~r~~~~~~~---------~~~~~~~~~D~~d~~~~~~~~~~~~~~~g~   73 (270)
T PRK06179          3 NSKVALVTGASSGIGRATAEKLARAGYRVFGTSRNPARAAP---------IPGVELLELDVTDDASVQAAVDEVIARAGR   73 (270)
T ss_pred             CCCEEEEecCCCHHHHHHHHHHHHCCCEEEEEeCChhhccc---------cCCCeeEEeecCCHHHHHHHHHHHHHhCCC
Confidence            57899999999999999999999999999999998654321         125788999999999999999999999999


Q ss_pred             ccEEEEccccCCcccccccCChHHHHHHHHhhhHHHHHHHHHHhhhhhhc-CCeEEEEcCccccccCCCCccchHHHHHH
Q 044010          126 LDHLVNNAGISSVALFEDIVNITDFKQIMNINFWGSVYTTRFAVPHLRYT-KGKIVVLSSAASWLTAPRMSFYNASKAAL  204 (248)
Q Consensus       126 id~vv~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~-~g~iV~isS~~~~~~~~~~~~Y~~sKaal  204 (248)
                      +|++|||||........+ .+.+++++.+++|+.+++.+++.+.|.|++. .|+||++||..+..+.+....|++||+++
T Consensus        74 ~d~li~~ag~~~~~~~~~-~~~~~~~~~~~~n~~g~~~~~~~~~~~~~~~~~~~iv~isS~~~~~~~~~~~~Y~~sK~a~  152 (270)
T PRK06179         74 IDVLVNNAGVGLAGAAEE-SSIAQAQALFDTNVFGILRMTRAVLPHMRAQGSGRIINISSVLGFLPAPYMALYAASKHAV  152 (270)
T ss_pred             CCEEEECCCCCCCcCccc-CCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcCCceEEEECCccccCCCCCccHHHHHHHHH
Confidence            999999999877665554 5789999999999999999999999998755 48999999999999989999999999999


Q ss_pred             HHHHHHHHHHhCC-CeEEEEEecCccccCccccc
Q 044010          205 VLFFETLRVELGS-DVGVTIVTPGFIESELTQGK  237 (248)
Q Consensus       205 ~~l~~~la~~~~~-~i~v~~v~pg~v~T~~~~~~  237 (248)
                      ++++++++.|+++ +|++++|+||+++|++..+.
T Consensus       153 ~~~~~~l~~el~~~gi~v~~v~pg~~~t~~~~~~  186 (270)
T PRK06179        153 EGYSESLDHEVRQFGIRVSLVEPAYTKTNFDANA  186 (270)
T ss_pred             HHHHHHHHHHHhhhCcEEEEEeCCCccccccccc
Confidence            9999999999976 59999999999999987654

>PRK06196 oxidoreductase; Provisional

Probab=100.00  E-value=3.9e-32  Score=235.88  Aligned_cols=187  Identities=27%  Similarity=0.315  Sum_probs=160.9

Q ss_pred             cCCCCCEEEEcCCCChHHHHHHHHHHHcCCeEEEEeCCcchHHHHHHHHHhhCCCcEEEEEccCCCHHHHHHHHHHHHhH
Q 044010           43 EDVSGKVVIITGASSGIGEHLAYEYARRGACLALCARREKSLEEVADTAREIGSPDVITIRADVSKVDDCRSLVEETMNH  122 (248)
Q Consensus        43 ~~~~~k~~lVtGg~~gIG~aia~~l~~~G~~V~l~~r~~~~~~~~~~~l~~~~~~~v~~~~~D~~~~~~~~~~~~~~~~~  122 (248)
                      .++++|+++||||++|||++++++|+++|++|++++|+.++.++..+++.     .+.++.+|++|.++++++++++.++
T Consensus        22 ~~l~~k~vlITGasggIG~~~a~~L~~~G~~Vv~~~R~~~~~~~~~~~l~-----~v~~~~~Dl~d~~~v~~~~~~~~~~   96 (315)
T PRK06196         22 HDLSGKTAIVTGGYSGLGLETTRALAQAGAHVIVPARRPDVAREALAGID-----GVEVVMLDLADLESVRAFAERFLDS   96 (315)
T ss_pred             CCCCCCEEEEeCCCchHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHhh-----hCeEEEccCCCHHHHHHHHHHHHhc
Confidence            36789999999999999999999999999999999999877766665553     3678999999999999999999998


Q ss_pred             cCCccEEEEccccCCcccccccCChHHHHHHHHhhhHHHHHHHHHHhhhhhhcC-CeEEEEcCccccc------------
Q 044010          123 FGRLDHLVNNAGISSVALFEDIVNITDFKQIMNINFWGSVYTTRFAVPHLRYTK-GKIVVLSSAASWL------------  189 (248)
Q Consensus       123 ~g~id~vv~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~-g~iV~isS~~~~~------------  189 (248)
                      ++++|++|||||...+.  .+ .+.++|+..+++|+.+++.++++++|.|.+.+ ++||++||..+..            
T Consensus        97 ~~~iD~li~nAg~~~~~--~~-~~~~~~~~~~~vN~~g~~~l~~~ll~~l~~~~~~~iV~vSS~~~~~~~~~~~~~~~~~  173 (315)
T PRK06196         97 GRRIDILINNAGVMACP--ET-RVGDGWEAQFATNHLGHFALVNLLWPALAAGAGARVVALSSAGHRRSPIRWDDPHFTR  173 (315)
T ss_pred             CCCCCEEEECCCCCCCC--Cc-cCCccHHHHHHHhhHHHHHHHHHHHHHHHhcCCCeEEEECCHHhccCCCCccccCccC
Confidence            99999999999976432  22 34588999999999999999999999987654 8999999976532            


Q ss_pred             cCCCCccchHHHHHHHHHHHHHHHHhCC-CeEEEEEecCccccCccccc
Q 044010          190 TAPRMSFYNASKAALVLFFETLRVELGS-DVGVTIVTPGFIESELTQGK  237 (248)
Q Consensus       190 ~~~~~~~Y~~sKaal~~l~~~la~~~~~-~i~v~~v~pg~v~T~~~~~~  237 (248)
                      +.++...|++||++++.+++.+++++++ +|+|++|+||+++|++.+..
T Consensus       174 ~~~~~~~Y~~SK~a~~~~~~~la~~~~~~gi~v~~v~PG~v~t~~~~~~  222 (315)
T PRK06196        174 GYDKWLAYGQSKTANALFAVHLDKLGKDQGVRAFSVHPGGILTPLQRHL  222 (315)
T ss_pred             CCChHHHHHHHHHHHHHHHHHHHHHhcCCCcEEEEeeCCcccCCccccC
Confidence            2334568999999999999999999976 59999999999999987543

>PRK08267 short chain dehydrogenase; Provisional

Probab=100.00  E-value=9.3e-32  Score=227.02  Aligned_cols=185  Identities=29%  Similarity=0.395  Sum_probs=165.8

Q ss_pred             CEEEEcCCCChHHHHHHHHHHHcCCeEEEEeCCcchHHHHHHHHHhhCCCcEEEEEccCCCHHHHHHHHHHHHhH-cCCc
Q 044010           48 KVVIITGASSGIGEHLAYEYARRGACLALCARREKSLEEVADTAREIGSPDVITIRADVSKVDDCRSLVEETMNH-FGRL  126 (248)
Q Consensus        48 k~~lVtGg~~gIG~aia~~l~~~G~~V~l~~r~~~~~~~~~~~l~~~~~~~v~~~~~D~~~~~~~~~~~~~~~~~-~g~i  126 (248)
                      |++|||||++|||.+++++|+++|++|++++|+.++.++..+.+.   +.++.++++|++|.++++++++++.++ .+++
T Consensus         2 k~vlItGasg~iG~~la~~l~~~G~~V~~~~r~~~~~~~~~~~~~---~~~~~~~~~D~~~~~~v~~~~~~~~~~~~~~i   78 (260)
T PRK08267          2 KSIFITGAASGIGRATALLFAAEGWRVGAYDINEAGLAALAAELG---AGNAWTGALDVTDRAAWDAALADFAAATGGRL   78 (260)
T ss_pred             cEEEEeCCCchHHHHHHHHHHHCCCeEEEEeCCHHHHHHHHHHhc---CCceEEEEecCCCHHHHHHHHHHHHHHcCCCC
Confidence            689999999999999999999999999999999877666655543   347889999999999999999998777 7899


Q ss_pred             cEEEEccccCCcccccccCChHHHHHHHHhhhHHHHHHHHHHhhhhhhc-CCeEEEEcCccccccCCCCccchHHHHHHH
Q 044010          127 DHLVNNAGISSVALFEDIVNITDFKQIMNINFWGSVYTTRFAVPHLRYT-KGKIVVLSSAASWLTAPRMSFYNASKAALV  205 (248)
Q Consensus       127 d~vv~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~-~g~iV~isS~~~~~~~~~~~~Y~~sKaal~  205 (248)
                      |++|||||......+.+ .+.+++++.+++|+.+++.+++.+.+.|++. +++||++||..+..+.++...|++||++++
T Consensus        79 d~vi~~ag~~~~~~~~~-~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~iv~isS~~~~~~~~~~~~Y~~sKaa~~  157 (260)
T PRK08267         79 DVLFNNAGILRGGPFED-IPLEAHDRVIDINVKGVLNGAHAALPYLKATPGARVINTSSASAIYGQPGLAVYSATKFAVR  157 (260)
T ss_pred             CEEEECCCCCCCCcccc-CCHHHHHHHHHHHhHHHHHHHHHHHHHHHhCCCCEEEEeCchhhCcCCCCchhhHHHHHHHH
Confidence            99999999876655555 4779999999999999999999999998754 589999999999999899999999999999


Q ss_pred             HHHHHHHHHhCC-CeEEEEEecCccccCcccc
Q 044010          206 LFFETLRVELGS-DVGVTIVTPGFIESELTQG  236 (248)
Q Consensus       206 ~l~~~la~~~~~-~i~v~~v~pg~v~T~~~~~  236 (248)
                      +++++++.++.+ +|++++|.||+++|++...
T Consensus       158 ~~~~~l~~~~~~~~i~v~~i~pg~~~t~~~~~  189 (260)
T PRK08267        158 GLTEALDLEWRRHGIRVADVMPLFVDTAMLDG  189 (260)
T ss_pred             HHHHHHHHHhcccCcEEEEEecCCcCCccccc
Confidence            999999999977 4999999999999998764

>PRK05693 short chain dehydrogenase; Provisional

Probab=100.00  E-value=8.1e-32  Score=229.22  Aligned_cols=181  Identities=33%  Similarity=0.446  Sum_probs=161.8

Q ss_pred             CEEEEcCCCChHHHHHHHHHHHcCCeEEEEeCCcchHHHHHHHHHhhCCCcEEEEEccCCCHHHHHHHHHHHHhHcCCcc
Q 044010           48 KVVIITGASSGIGEHLAYEYARRGACLALCARREKSLEEVADTAREIGSPDVITIRADVSKVDDCRSLVEETMNHFGRLD  127 (248)
Q Consensus        48 k~~lVtGg~~gIG~aia~~l~~~G~~V~l~~r~~~~~~~~~~~l~~~~~~~v~~~~~D~~~~~~~~~~~~~~~~~~g~id  127 (248)
                      |++|||||++|||.+++++|+++|++|++++|+.++.+..    .+.   .+.++.+|+++.++++++++++.+.++++|
T Consensus         2 k~vlItGasggiG~~la~~l~~~G~~V~~~~r~~~~~~~~----~~~---~~~~~~~Dl~~~~~~~~~~~~~~~~~~~id   74 (274)
T PRK05693          2 PVVLITGCSSGIGRALADAFKAAGYEVWATARKAEDVEAL----AAA---GFTAVQLDVNDGAALARLAEELEAEHGGLD   74 (274)
T ss_pred             CEEEEecCCChHHHHHHHHHHHCCCEEEEEeCCHHHHHHH----HHC---CCeEEEeeCCCHHHHHHHHHHHHHhcCCCC
Confidence            6899999999999999999999999999999987654432    221   356889999999999999999999999999


Q ss_pred             EEEEccccCCcccccccCChHHHHHHHHhhhHHHHHHHHHHhhhhhhcCCeEEEEcCccccccCCCCccchHHHHHHHHH
Q 044010          128 HLVNNAGISSVALFEDIVNITDFKQIMNINFWGSVYTTRFAVPHLRYTKGKIVVLSSAASWLTAPRMSFYNASKAALVLF  207 (248)
Q Consensus       128 ~vv~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~g~iV~isS~~~~~~~~~~~~Y~~sKaal~~l  207 (248)
                      ++|||||.....+..+ .+.+++++.+++|+.+++.+++.+.|.|.+..|++|++||..+..+.+....|++||++++.+
T Consensus        75 ~vi~~ag~~~~~~~~~-~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~~g~iv~isS~~~~~~~~~~~~Y~~sK~al~~~  153 (274)
T PRK05693         75 VLINNAGYGAMGPLLD-GGVEAMRRQFETNVFAVVGVTRALFPLLRRSRGLVVNIGSVSGVLVTPFAGAYCASKAAVHAL  153 (274)
T ss_pred             EEEECCCCCCCCCccc-CCHHHHHHHHHHHhHHHHHHHHHHHHHHhhcCCEEEEECCccccCCCCCccHHHHHHHHHHHH
Confidence            9999999876555555 478999999999999999999999999976679999999999998888899999999999999


Q ss_pred             HHHHHHHhCC-CeEEEEEecCccccCcccc
Q 044010          208 FETLRVELGS-DVGVTIVTPGFIESELTQG  236 (248)
Q Consensus       208 ~~~la~~~~~-~i~v~~v~pg~v~T~~~~~  236 (248)
                      +++++.|+++ +|+|++|+||+++|++.+.
T Consensus       154 ~~~l~~e~~~~gi~v~~v~pg~v~t~~~~~  183 (274)
T PRK05693        154 SDALRLELAPFGVQVMEVQPGAIASQFASN  183 (274)
T ss_pred             HHHHHHHhhhhCeEEEEEecCccccccccc
Confidence            9999999977 5999999999999998765

>PLN00015 protochlorophyllide reductase

Probab=100.00  E-value=4.4e-32  Score=234.93  Aligned_cols=185  Identities=22%  Similarity=0.274  Sum_probs=156.4

Q ss_pred             EEcCCCChHHHHHHHHHHHcC-CeEEEEeCCcchHHHHHHHHHhhCCCcEEEEEccCCCHHHHHHHHHHHHhHcCCccEE
Q 044010           51 IITGASSGIGEHLAYEYARRG-ACLALCARREKSLEEVADTAREIGSPDVITIRADVSKVDDCRSLVEETMNHFGRLDHL  129 (248)
Q Consensus        51 lVtGg~~gIG~aia~~l~~~G-~~V~l~~r~~~~~~~~~~~l~~~~~~~v~~~~~D~~~~~~~~~~~~~~~~~~g~id~v  129 (248)
                      +||||++|||++++++|+++| ++|++++|+.++.++..+++...+ .++.++.+|++|.++++++++++.+.++++|++
T Consensus         1 lITGas~GIG~aia~~l~~~G~~~V~~~~r~~~~~~~~~~~l~~~~-~~~~~~~~Dl~d~~~v~~~~~~~~~~~~~iD~l   79 (308)
T PLN00015          1 IITGASSGLGLATAKALAETGKWHVVMACRDFLKAERAAKSAGMPK-DSYTVMHLDLASLDSVRQFVDNFRRSGRPLDVL   79 (308)
T ss_pred             CEeCCCChHHHHHHHHHHHCCCCEEEEEeCCHHHHHHHHHHhcCCC-CeEEEEEecCCCHHHHHHHHHHHHhcCCCCCEE
Confidence            699999999999999999999 999999999887777776664322 367889999999999999999999888999999


Q ss_pred             EEccccCCcccccccCChHHHHHHHHhhhHHHHHHHHHHhhhhhhc---CCeEEEEcCcccccc----------------
Q 044010          130 VNNAGISSVALFEDIVNITDFKQIMNINFWGSVYTTRFAVPHLRYT---KGKIVVLSSAASWLT----------------  190 (248)
Q Consensus       130 v~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~---~g~iV~isS~~~~~~----------------  190 (248)
                      |||||...+.......+.++|++.+++|+.|++.+++.++|.|.+.   +|+||++||..+..+                
T Consensus        80 InnAG~~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~lp~l~~~~~~~g~IV~vsS~~~~~~~~~~~~~~~~~~~~~~  159 (308)
T PLN00015         80 VCNAAVYLPTAKEPTFTADGFELSVGTNHLGHFLLSRLLLDDLKKSDYPSKRLIIVGSITGNTNTLAGNVPPKANLGDLR  159 (308)
T ss_pred             EECCCcCCCCCCcCCCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhCCCCCCEEEEEeccccccccccccCCCccchhhhh
Confidence            9999986433222224679999999999999999999999999755   489999999876421                


Q ss_pred             -------------------CCCCccchHHHHHHHHHHHHHHHHhCC--CeEEEEEecCcc-ccCcccc
Q 044010          191 -------------------APRMSFYNASKAALVLFFETLRVELGS--DVGVTIVTPGFI-ESELTQG  236 (248)
Q Consensus       191 -------------------~~~~~~Y~~sKaal~~l~~~la~~~~~--~i~v~~v~pg~v-~T~~~~~  236 (248)
                                         .++..+|++||+|+..+++.++++++.  +|+|++|+||+| .|+|.+.
T Consensus       160 ~~~~~~~~~~~~~~~~~~~~~~~~aY~~SK~a~~~~~~~la~~~~~~~gi~v~~v~PG~v~~t~~~~~  227 (308)
T PLN00015        160 GLAGGLNGLNSSAMIDGGEFDGAKAYKDSKVCNMLTMQEFHRRYHEETGITFASLYPGCIATTGLFRE  227 (308)
T ss_pred             hhhcccCCccchhhccccCCcHHHHHhHhHHHHHHHHHHHHHhhcccCCeEEEEecCCcccCcccccc
Confidence                               123567999999999999999999963  599999999999 7998754

>PRK08263 short chain dehydrogenase; Provisional

Probab=100.00  E-value=1e-31  Score=228.83  Aligned_cols=186  Identities=31%  Similarity=0.466  Sum_probs=166.1

Q ss_pred             CCCCEEEEcCCCChHHHHHHHHHHHcCCeEEEEeCCcchHHHHHHHHHhhCCCcEEEEEccCCCHHHHHHHHHHHHhHcC
Q 044010           45 VSGKVVIITGASSGIGEHLAYEYARRGACLALCARREKSLEEVADTAREIGSPDVITIRADVSKVDDCRSLVEETMNHFG  124 (248)
Q Consensus        45 ~~~k~~lVtGg~~gIG~aia~~l~~~G~~V~l~~r~~~~~~~~~~~l~~~~~~~v~~~~~D~~~~~~~~~~~~~~~~~~g  124 (248)
                      |.+|+++||||++|||++++++|+++|++|++++|+.++.++..+.+    ..++.++.+|++|.++++++++++.+.++
T Consensus         1 ~~~k~vlItGasg~iG~~~a~~l~~~g~~V~~~~r~~~~~~~~~~~~----~~~~~~~~~D~~~~~~~~~~~~~~~~~~~   76 (275)
T PRK08263          1 MMEKVWFITGASRGFGRAWTEAALERGDRVVATARDTATLADLAEKY----GDRLLPLALDVTDRAAVFAAVETAVEHFG   76 (275)
T ss_pred             CCCCEEEEeCCCChHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHhc----cCCeeEEEccCCCHHHHHHHHHHHHHHcC
Confidence            35789999999999999999999999999999999877655544332    23678899999999999999999999999


Q ss_pred             CccEEEEccccCCcccccccCChHHHHHHHHhhhHHHHHHHHHHhhhhhhc-CCeEEEEcCccccccCCCCccchHHHHH
Q 044010          125 RLDHLVNNAGISSVALFEDIVNITDFKQIMNINFWGSVYTTRFAVPHLRYT-KGKIVVLSSAASWLTAPRMSFYNASKAA  203 (248)
Q Consensus       125 ~id~vv~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~-~g~iV~isS~~~~~~~~~~~~Y~~sKaa  203 (248)
                      ++|++|||||.....+..+ .+.++|++.+++|+.+++.+++.+.|.|++. .+++|++||..+..+.++...|+++|++
T Consensus        77 ~~d~vi~~ag~~~~~~~~~-~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~iv~vsS~~~~~~~~~~~~Y~~sKaa  155 (275)
T PRK08263         77 RLDIVVNNAGYGLFGMIEE-VTESEARAQIDTNFFGALWVTQAVLPYLREQRSGHIIQISSIGGISAFPMSGIYHASKWA  155 (275)
T ss_pred             CCCEEEECCCCcccccccc-CCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcCCCEEEEEcChhhcCCCCCccHHHHHHHH
Confidence            9999999999887666555 4779999999999999999999999998754 4899999999999999999999999999


Q ss_pred             HHHHHHHHHHHhCC-CeEEEEEecCccccCccc
Q 044010          204 LVLFFETLRVELGS-DVGVTIVTPGFIESELTQ  235 (248)
Q Consensus       204 l~~l~~~la~~~~~-~i~v~~v~pg~v~T~~~~  235 (248)
                      ++.+++.++.++++ +++|++|+||+++|++..
T Consensus       156 ~~~~~~~la~e~~~~gi~v~~v~Pg~~~t~~~~  188 (275)
T PRK08263        156 LEGMSEALAQEVAEFGIKVTLVEPGGYSTDWAG  188 (275)
T ss_pred             HHHHHHHHHHHhhhhCcEEEEEecCCccCCccc
Confidence            99999999999976 599999999999999874

>PRK12429 3-hydroxybutyrate dehydrogenase; Provisional

Probab=100.00  E-value=1.3e-31  Score=225.25  Aligned_cols=192  Identities=27%  Similarity=0.470  Sum_probs=172.7

Q ss_pred             CCCCCEEEEcCCCChHHHHHHHHHHHcCCeEEEEeCCcchHHHHHHHHHhhCCCcEEEEEccCCCHHHHHHHHHHHHhHc
Q 044010           44 DVSGKVVIITGASSGIGEHLAYEYARRGACLALCARREKSLEEVADTAREIGSPDVITIRADVSKVDDCRSLVEETMNHF  123 (248)
Q Consensus        44 ~~~~k~~lVtGg~~gIG~aia~~l~~~G~~V~l~~r~~~~~~~~~~~l~~~~~~~v~~~~~D~~~~~~~~~~~~~~~~~~  123 (248)
                      ++++|+++||||+++||.+++++|+++|++|++++|+.++.++..+++++.+ .++..+.+|++|.++++++++++.+.+
T Consensus         1 ~~~~~~vlItG~sg~iG~~la~~l~~~g~~v~~~~r~~~~~~~~~~~~~~~~-~~~~~~~~Dl~~~~~~~~~~~~~~~~~   79 (258)
T PRK12429          1 MLKGKVALVTGAASGIGLEIALALAKEGAKVVIADLNDEAAAAAAEALQKAG-GKAIGVAMDVTDEEAINAGIDYAVETF   79 (258)
T ss_pred             CCCCCEEEEECCCchHHHHHHHHHHHCCCeEEEEeCCHHHHHHHHHHHHhcC-CcEEEEEcCCCCHHHHHHHHHHHHHHc
Confidence            3678999999999999999999999999999999999988887777776644 378899999999999999999999999


Q ss_pred             CCccEEEEccccCCcccccccCChHHHHHHHHhhhHHHHHHHHHHhhhhhhcC-CeEEEEcCccccccCCCCccchHHHH
Q 044010          124 GRLDHLVNNAGISSVALFEDIVNITDFKQIMNINFWGSVYTTRFAVPHLRYTK-GKIVVLSSAASWLTAPRMSFYNASKA  202 (248)
Q Consensus       124 g~id~vv~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~-g~iV~isS~~~~~~~~~~~~Y~~sKa  202 (248)
                      +++|++|||||........+ .+.+++++.+++|+.+++.+++.+++.|++++ +++|++||..+..+.++...|+++|+
T Consensus        80 ~~~d~vi~~a~~~~~~~~~~-~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~iv~iss~~~~~~~~~~~~y~~~k~  158 (258)
T PRK12429         80 GGVDILVNNAGIQHVAPIED-FPTEKWKKMIAIMLDGAFLTTKAALPIMKAQGGGRIINMASVHGLVGSAGKAAYVSAKH  158 (258)
T ss_pred             CCCCEEEECCCCCCCCChhh-CCHHHHHHHHhhcchhhHHHHHHHHHHHHhcCCeEEEEEcchhhccCCCCcchhHHHHH
Confidence            99999999999876665555 46789999999999999999999999997554 89999999999999999999999999


Q ss_pred             HHHHHHHHHHHHhCC-CeEEEEEecCccccCccccc
Q 044010          203 ALVLFFETLRVELGS-DVGVTIVTPGFIESELTQGK  237 (248)
Q Consensus       203 al~~l~~~la~~~~~-~i~v~~v~pg~v~T~~~~~~  237 (248)
                      +++.+++.++.++.+ +|+++++.||.++|++....
T Consensus       159 a~~~~~~~l~~~~~~~~i~v~~~~pg~v~~~~~~~~  194 (258)
T PRK12429        159 GLIGLTKVVALEGATHGVTVNAICPGYVDTPLVRKQ  194 (258)
T ss_pred             HHHHHHHHHHHHhcccCeEEEEEecCCCcchhhhhh
Confidence            999999999999976 59999999999999987543

>PRK06123 short chain dehydrogenase; Provisional

Probab=100.00  E-value=1.3e-31  Score=224.19  Aligned_cols=188  Identities=35%  Similarity=0.436  Sum_probs=160.5

Q ss_pred             CCEEEEcCCCChHHHHHHHHHHHcCCeEEEEeC-CcchHHHHHHHHHhhCCCcEEEEEccCCCHHHHHHHHHHHHhHcCC
Q 044010           47 GKVVIITGASSGIGEHLAYEYARRGACLALCAR-REKSLEEVADTAREIGSPDVITIRADVSKVDDCRSLVEETMNHFGR  125 (248)
Q Consensus        47 ~k~~lVtGg~~gIG~aia~~l~~~G~~V~l~~r-~~~~~~~~~~~l~~~~~~~v~~~~~D~~~~~~~~~~~~~~~~~~g~  125 (248)
                      +|++|||||+++||.+++++|+++|++|++..+ +++..++..+.++..+ .++.++.+|++|.++++++++++.+.+++
T Consensus         2 ~~~~lVtG~~~~iG~~~a~~l~~~G~~vv~~~~~~~~~~~~~~~~l~~~~-~~~~~~~~Dl~~~~~~~~~~~~~~~~~~~   80 (248)
T PRK06123          2 RKVMIITGASRGIGAATALLAAERGYAVCLNYLRNRDAAEAVVQAIRRQG-GEALAVAADVADEADVLRLFEAVDRELGR   80 (248)
T ss_pred             CCEEEEECCCchHHHHHHHHHHHCCCeEEEecCCCHHHHHHHHHHHHhCC-CcEEEEEeccCCHHHHHHHHHHHHHHhCC
Confidence            579999999999999999999999999888874 4444555555565444 36788999999999999999999999999


Q ss_pred             ccEEEEccccCCcccccccCChHHHHHHHHhhhHHHHHHHHHHhhhhhhc----CCeEEEEcCccccccCCC-CccchHH
Q 044010          126 LDHLVNNAGISSVALFEDIVNITDFKQIMNINFWGSVYTTRFAVPHLRYT----KGKIVVLSSAASWLTAPR-MSFYNAS  200 (248)
Q Consensus       126 id~vv~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~----~g~iV~isS~~~~~~~~~-~~~Y~~s  200 (248)
                      +|++|||||...+....+..+.++|++.+++|+.+++.+++.+.+.|.++    +|++|++||..+..+.++ ...|+++
T Consensus        81 id~li~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~g~iv~~sS~~~~~~~~~~~~~Y~~s  160 (248)
T PRK06123         81 LDALVNNAGILEAQMRLEQMDAARLTRIFATNVVGSFLCAREAVKRMSTRHGGRGGAIVNVSSMAARLGSPGEYIDYAAS  160 (248)
T ss_pred             CCEEEECCCCCCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcCCCCCeEEEEECchhhcCCCCCCccchHHH
Confidence            99999999987543323335789999999999999999999999998643    378999999988887776 3679999


Q ss_pred             HHHHHHHHHHHHHHhCC-CeEEEEEecCccccCccc
Q 044010          201 KAALVLFFETLRVELGS-DVGVTIVTPGFIESELTQ  235 (248)
Q Consensus       201 Kaal~~l~~~la~~~~~-~i~v~~v~pg~v~T~~~~  235 (248)
                      |+++++++++++.++++ +|+|++|+||.+.|++..
T Consensus       161 Kaa~~~~~~~la~~~~~~~i~v~~i~pg~v~~~~~~  196 (248)
T PRK06123        161 KGAIDTMTIGLAKEVAAEGIRVNAVRPGVIYTEIHA  196 (248)
T ss_pred             HHHHHHHHHHHHHHhcccCeEEEEEecCcccCchhh
Confidence            99999999999999977 499999999999999754

>PRK05875 short chain dehydrogenase; Provisional

Probab=100.00  E-value=2e-31  Score=226.86  Aligned_cols=194  Identities=25%  Similarity=0.333  Sum_probs=169.1

Q ss_pred             cCCCCCEEEEcCCCChHHHHHHHHHHHcCCeEEEEeCCcchHHHHHHHHHhhC-CCcEEEEEccCCCHHHHHHHHHHHHh
Q 044010           43 EDVSGKVVIITGASSGIGEHLAYEYARRGACLALCARREKSLEEVADTAREIG-SPDVITIRADVSKVDDCRSLVEETMN  121 (248)
Q Consensus        43 ~~~~~k~~lVtGg~~gIG~aia~~l~~~G~~V~l~~r~~~~~~~~~~~l~~~~-~~~v~~~~~D~~~~~~~~~~~~~~~~  121 (248)
                      .+|++|++||||++++||.+++++|+++|++|++++|+.++.++..+++.... ..++.++.+|++|.++++++++++.+
T Consensus         3 ~~~~~k~vlItGasg~IG~~la~~l~~~G~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~   82 (276)
T PRK05875          3 LSFQDRTYLVTGGGSGIGKGVAAGLVAAGAAVMIVGRNPDKLAAAAEEIEALKGAGAVRYEPADVTDEDQVARAVDAATA   82 (276)
T ss_pred             cCCCCCEEEEECCCcHHHHHHHHHHHHCCCeEEEEeCCHHHHHHHHHHHHhccCCCceEEEEcCCCCHHHHHHHHHHHHH
Confidence            35789999999999999999999999999999999999877777666665543 24678899999999999999999999


Q ss_pred             HcCCccEEEEccccCCcccccccCChHHHHHHHHhhhHHHHHHHHHHhhhhhhc-CCeEEEEcCccccccCCCCccchHH
Q 044010          122 HFGRLDHLVNNAGISSVALFEDIVNITDFKQIMNINFWGSVYTTRFAVPHLRYT-KGKIVVLSSAASWLTAPRMSFYNAS  200 (248)
Q Consensus       122 ~~g~id~vv~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~-~g~iV~isS~~~~~~~~~~~~Y~~s  200 (248)
                      +++++|++|||||...........+.+++++++++|+.+++.+++.+.+.|.+. .|+|+++||..+..+.+...+|+++
T Consensus        83 ~~~~~d~li~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~g~iv~~sS~~~~~~~~~~~~Y~~s  162 (276)
T PRK05875         83 WHGRLHGVVHCAGGSETIGPITQIDSDAWRRTVDLNVNGTMYVLKHAARELVRGGGGSFVGISSIAASNTHRWFGAYGVT  162 (276)
T ss_pred             HcCCCCEEEECCCcccCCCChhhCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcCCcEEEEEechhhcCCCCCCcchHHH
Confidence            999999999999975432222235778999999999999999999999988643 4899999999988888888999999


Q ss_pred             HHHHHHHHHHHHHHhCC-CeEEEEEecCccccCcccc
Q 044010          201 KAALVLFFETLRVELGS-DVGVTIVTPGFIESELTQG  236 (248)
Q Consensus       201 Kaal~~l~~~la~~~~~-~i~v~~v~pg~v~T~~~~~  236 (248)
                      |++++++++.+++++.+ +||+++|.||+++|++...
T Consensus       163 K~a~~~~~~~~~~~~~~~~i~v~~i~Pg~v~t~~~~~  199 (276)
T PRK05875        163 KSAVDHLMKLAADELGPSWVRVNSIRPGLIRTDLVAP  199 (276)
T ss_pred             HHHHHHHHHHHHHHhcccCeEEEEEecCccCCccccc
Confidence            99999999999999976 4999999999999998754

>PRK06914 short chain dehydrogenase; Provisional

Probab=100.00  E-value=1.5e-31  Score=228.16  Aligned_cols=190  Identities=28%  Similarity=0.477  Sum_probs=169.0

Q ss_pred             CCCCEEEEcCCCChHHHHHHHHHHHcCCeEEEEeCCcchHHHHHHHHHhhC-CCcEEEEEccCCCHHHHHHHHHHHHhHc
Q 044010           45 VSGKVVIITGASSGIGEHLAYEYARRGACLALCARREKSLEEVADTAREIG-SPDVITIRADVSKVDDCRSLVEETMNHF  123 (248)
Q Consensus        45 ~~~k~~lVtGg~~gIG~aia~~l~~~G~~V~l~~r~~~~~~~~~~~l~~~~-~~~v~~~~~D~~~~~~~~~~~~~~~~~~  123 (248)
                      |++|++|||||+||||.+++++|+++|++|++++|+.+..++..+++...+ +.++.++.+|++|.+++++ ++++.+.+
T Consensus         1 ~~~k~~lItGasg~iG~~la~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~D~~d~~~~~~-~~~~~~~~   79 (280)
T PRK06914          1 MNKKIAIVTGASSGFGLLTTLELAKKGYLVIATMRNPEKQENLLSQATQLNLQQNIKVQQLDVTDQNSIHN-FQLVLKEI   79 (280)
T ss_pred             CCCCEEEEECCCchHHHHHHHHHHhCCCEEEEEeCCHHHHHHHHHHHHhcCCCCceeEEecCCCCHHHHHH-HHHHHHhc
Confidence            468999999999999999999999999999999999887777766665543 3478899999999999999 99998889


Q ss_pred             CCccEEEEccccCCcccccccCChHHHHHHHHhhhHHHHHHHHHHhhhhhhc-CCeEEEEcCccccccCCCCccchHHHH
Q 044010          124 GRLDHLVNNAGISSVALFEDIVNITDFKQIMNINFWGSVYTTRFAVPHLRYT-KGKIVVLSSAASWLTAPRMSFYNASKA  202 (248)
Q Consensus       124 g~id~vv~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~-~g~iV~isS~~~~~~~~~~~~Y~~sKa  202 (248)
                      +++|++|||||...+....+ .+.+++++.+++|+.+++.+++.+.|.|++. .+++|++||..+..+.++...|++||+
T Consensus        80 ~~id~vv~~ag~~~~~~~~~-~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~iv~vsS~~~~~~~~~~~~Y~~sK~  158 (280)
T PRK06914         80 GRIDLLVNNAGYANGGFVEE-IPVEEYRKQFETNVFGAISVTQAVLPYMRKQKSGKIINISSISGRVGFPGLSPYVSSKY  158 (280)
T ss_pred             CCeeEEEECCcccccCcccc-CCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcCCCEEEEECcccccCCCCCCchhHHhHH
Confidence            99999999999877655544 5779999999999999999999999998755 489999999998888889999999999


Q ss_pred             HHHHHHHHHHHHhCC-CeEEEEEecCccccCcccc
Q 044010          203 ALVLFFETLRVELGS-DVGVTIVTPGFIESELTQG  236 (248)
Q Consensus       203 al~~l~~~la~~~~~-~i~v~~v~pg~v~T~~~~~  236 (248)
                      ++++++++++.++.+ +|++++++||+++|++...
T Consensus       159 ~~~~~~~~l~~~~~~~~i~v~~v~pg~~~t~~~~~  193 (280)
T PRK06914        159 ALEGFSESLRLELKPFGIDVALIEPGSYNTNIWEV  193 (280)
T ss_pred             HHHHHHHHHHHHhhhhCCEEEEEecCCcccchhhc
Confidence            999999999999877 5999999999999998653

>PRK08220 2,3-dihydroxybenzoate-2,3-dehydrogenase; Validated

Probab=100.00  E-value=1.5e-31  Score=224.48  Aligned_cols=186  Identities=28%  Similarity=0.396  Sum_probs=165.0

Q ss_pred             ccCCCCCEEEEcCCCChHHHHHHHHHHHcCCeEEEEeCCcchHHHHHHHHHhhCCCcEEEEEccCCCHHHHHHHHHHHHh
Q 044010           42 SEDVSGKVVIITGASSGIGEHLAYEYARRGACLALCARREKSLEEVADTAREIGSPDVITIRADVSKVDDCRSLVEETMN  121 (248)
Q Consensus        42 ~~~~~~k~~lVtGg~~gIG~aia~~l~~~G~~V~l~~r~~~~~~~~~~~l~~~~~~~v~~~~~D~~~~~~~~~~~~~~~~  121 (248)
                      .+++++|++|||||+++||.+++++|+++|++|++++|+.         ++.. +.++.++.+|+++.++++++++++.+
T Consensus         3 ~~~~~~k~vlItGas~~iG~~la~~l~~~G~~v~~~~~~~---------~~~~-~~~~~~~~~D~~~~~~~~~~~~~~~~   72 (252)
T PRK08220          3 AMDFSGKTVWVTGAAQGIGYAVALAFVEAGAKVIGFDQAF---------LTQE-DYPFATFVLDVSDAAAVAQVCQRLLA   72 (252)
T ss_pred             ccCCCCCEEEEeCCCchHHHHHHHHHHHCCCEEEEEecch---------hhhc-CCceEEEEecCCCHHHHHHHHHHHHH
Confidence            3578999999999999999999999999999999999975         1112 23688899999999999999999999


Q ss_pred             HcCCccEEEEccccCCcccccccCChHHHHHHHHhhhHHHHHHHHHHhhhhhhc-CCeEEEEcCccccccCCCCccchHH
Q 044010          122 HFGRLDHLVNNAGISSVALFEDIVNITDFKQIMNINFWGSVYTTRFAVPHLRYT-KGKIVVLSSAASWLTAPRMSFYNAS  200 (248)
Q Consensus       122 ~~g~id~vv~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~-~g~iV~isS~~~~~~~~~~~~Y~~s  200 (248)
                      .++++|++|||+|.....+..+ .+.+++++.+++|+.+++.+++++.+.|+++ .|+||++||..+..+.++...|++|
T Consensus        73 ~~~~id~vi~~ag~~~~~~~~~-~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~g~iv~~ss~~~~~~~~~~~~Y~~s  151 (252)
T PRK08220         73 ETGPLDVLVNAAGILRMGATDS-LSDEDWQQTFAVNAGGAFNLFRAVMPQFRRQRSGAIVTVGSNAAHVPRIGMAAYGAS  151 (252)
T ss_pred             HcCCCCEEEECCCcCCCCCccc-CCHHHHHHHHHHhhHHHHHHHHHHHHHHHhCCCCEEEEECCchhccCCCCCchhHHH
Confidence            9999999999999876655544 4679999999999999999999999998754 4899999999988888889999999


Q ss_pred             HHHHHHHHHHHHHHhCC-CeEEEEEecCccccCcccccc
Q 044010          201 KAALVLFFETLRVELGS-DVGVTIVTPGFIESELTQGKF  238 (248)
Q Consensus       201 Kaal~~l~~~la~~~~~-~i~v~~v~pg~v~T~~~~~~~  238 (248)
                      |++++++++++++|+++ +|+||+|.||+++|++....+
T Consensus       152 K~a~~~~~~~la~e~~~~~i~v~~i~pg~v~t~~~~~~~  190 (252)
T PRK08220        152 KAALTSLAKCVGLELAPYGVRCNVVSPGSTDTDMQRTLW  190 (252)
T ss_pred             HHHHHHHHHHHHHHhhHhCeEEEEEecCcCcchhhhhhc
Confidence            99999999999999976 499999999999999876543

>PRK12936 3-ketoacyl-(acyl-carrier-protein) reductase NodG; Reviewed

Probab=100.00  E-value=1.9e-31  Score=222.57  Aligned_cols=189  Identities=32%  Similarity=0.470  Sum_probs=166.3

Q ss_pred             cCCCCCEEEEcCCCChHHHHHHHHHHHcCCeEEEEeCCcchHHHHHHHHHhhCCCcEEEEEccCCCHHHHHHHHHHHHhH
Q 044010           43 EDVSGKVVIITGASSGIGEHLAYEYARRGACLALCARREKSLEEVADTAREIGSPDVITIRADVSKVDDCRSLVEETMNH  122 (248)
Q Consensus        43 ~~~~~k~~lVtGg~~gIG~aia~~l~~~G~~V~l~~r~~~~~~~~~~~l~~~~~~~v~~~~~D~~~~~~~~~~~~~~~~~  122 (248)
                      +++++|+++||||+++||++++++|+++|+.|++.+|+.++.++..+.+   + .++.++.+|+++.++++++++++.+.
T Consensus         2 ~~~~~~~vlItGa~g~iG~~la~~l~~~g~~v~~~~~~~~~~~~~~~~~---~-~~~~~~~~D~~~~~~~~~~~~~~~~~   77 (245)
T PRK12936          2 FDLSGRKALVTGASGGIGEEIARLLHAQGAIVGLHGTRVEKLEALAAEL---G-ERVKIFPANLSDRDEVKALGQKAEAD   77 (245)
T ss_pred             cCCCCCEEEEECCCChHHHHHHHHHHHCCCEEEEEcCCHHHHHHHHHHh---C-CceEEEEccCCCHHHHHHHHHHHHHH
Confidence            3688999999999999999999999999999999999877666544333   2 36788999999999999999999999


Q ss_pred             cCCccEEEEccccCCcccccccCChHHHHHHHHhhhHHHHHHHHHHhhhhhh-cCCeEEEEcCccccccCCCCccchHHH
Q 044010          123 FGRLDHLVNNAGISSVALFEDIVNITDFKQIMNINFWGSVYTTRFAVPHLRY-TKGKIVVLSSAASWLTAPRMSFYNASK  201 (248)
Q Consensus       123 ~g~id~vv~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~-~~g~iV~isS~~~~~~~~~~~~Y~~sK  201 (248)
                      ++++|++|||||...+.+..+ .+.++|++.+++|+.+++.+++.+.+.+.+ ..+++|++||..+..+.+....|+++|
T Consensus        78 ~~~id~vi~~ag~~~~~~~~~-~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~iv~~sS~~~~~~~~~~~~Y~~sk  156 (245)
T PRK12936         78 LEGVDILVNNAGITKDGLFVR-MSDEDWDSVLEVNLTATFRLTRELTHPMMRRRYGRIINITSVVGVTGNPGQANYCASK  156 (245)
T ss_pred             cCCCCEEEECCCCCCCCcccc-CCHHHHHHHHhhccHHHHHHHHHHHHHHHHhCCCEEEEECCHHhCcCCCCCcchHHHH
Confidence            999999999999876655444 466899999999999999999999987654 458999999999988888899999999


Q ss_pred             HHHHHHHHHHHHHhCC-CeEEEEEecCccccCcccc
Q 044010          202 AALVLFFETLRVELGS-DVGVTIVTPGFIESELTQG  236 (248)
Q Consensus       202 aal~~l~~~la~~~~~-~i~v~~v~pg~v~T~~~~~  236 (248)
                      +++.++++.++.++.+ ++++++++||+++|++...
T Consensus       157 ~a~~~~~~~la~~~~~~~i~v~~i~pg~~~t~~~~~  192 (245)
T PRK12936        157 AGMIGFSKSLAQEIATRNVTVNCVAPGFIESAMTGK  192 (245)
T ss_pred             HHHHHHHHHHHHHhhHhCeEEEEEEECcCcCchhcc
Confidence            9999999999999976 4999999999999998754

>PRK07774 short chain dehydrogenase; Provisional

Probab=100.00  E-value=2.6e-31  Score=222.70  Aligned_cols=190  Identities=34%  Similarity=0.499  Sum_probs=164.7

Q ss_pred             cCCCCCEEEEcCCCChHHHHHHHHHHHcCCeEEEEeCCcchHHHHHHHHHhhCCCcEEEEEccCCCHHHHHHHHHHHHhH
Q 044010           43 EDVSGKVVIITGASSGIGEHLAYEYARRGACLALCARREKSLEEVADTAREIGSPDVITIRADVSKVDDCRSLVEETMNH  122 (248)
Q Consensus        43 ~~~~~k~~lVtGg~~gIG~aia~~l~~~G~~V~l~~r~~~~~~~~~~~l~~~~~~~v~~~~~D~~~~~~~~~~~~~~~~~  122 (248)
                      +++++|+++||||++|||.+++++|+++|++|++++|+.+..++..++++..+. ++.++.+|+++.++++++++++.+.
T Consensus         2 ~~~~~k~vlItGasg~iG~~la~~l~~~g~~vi~~~r~~~~~~~~~~~~~~~~~-~~~~~~~Dl~~~~~~~~~~~~~~~~   80 (250)
T PRK07774          2 GRFDDKVAIVTGAAGGIGQAYAEALAREGASVVVADINAEGAERVAKQIVADGG-TAIAVQVDVSDPDSAKAMADATVSA   80 (250)
T ss_pred             cccCCCEEEEECCCchHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcCC-cEEEEEcCCCCHHHHHHHHHHHHHH
Confidence            467899999999999999999999999999999999998776666666654433 6778999999999999999999999


Q ss_pred             cCCccEEEEccccCCc---ccccccCChHHHHHHHHhhhHHHHHHHHHHhhhhhhc-CCeEEEEcCccccccCCCCccch
Q 044010          123 FGRLDHLVNNAGISSV---ALFEDIVNITDFKQIMNINFWGSVYTTRFAVPHLRYT-KGKIVVLSSAASWLTAPRMSFYN  198 (248)
Q Consensus       123 ~g~id~vv~~ag~~~~---~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~-~g~iV~isS~~~~~~~~~~~~Y~  198 (248)
                      ++++|++|||||....   .+..+ .+.+++++.+++|+.+++.+++.+.+.+.+. .|++|++||..++.+   ...|+
T Consensus        81 ~~~id~vi~~ag~~~~~~~~~~~~-~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~iv~~sS~~~~~~---~~~Y~  156 (250)
T PRK07774         81 FGGIDYLVNNAAIYGGMKLDLLIT-VPWDYYKKFMSVNLDGALVCTRAVYKHMAKRGGGAIVNQSSTAAWLY---SNFYG  156 (250)
T ss_pred             hCCCCEEEECCCCcCCCCCCChhh-CCHHHHHHHHhhhhHHHHHHHHHHHHHHHHhCCcEEEEEecccccCC---ccccH
Confidence            9999999999997642   23333 4779999999999999999999999998643 589999999887644   56899


Q ss_pred             HHHHHHHHHHHHHHHHhCC-CeEEEEEecCccccCccccc
Q 044010          199 ASKAALVLFFETLRVELGS-DVGVTIVTPGFIESELTQGK  237 (248)
Q Consensus       199 ~sKaal~~l~~~la~~~~~-~i~v~~v~pg~v~T~~~~~~  237 (248)
                      +||++++++++++++++.. ++++++++||+++|++.+..
T Consensus       157 ~sK~a~~~~~~~l~~~~~~~~i~v~~v~pg~~~t~~~~~~  196 (250)
T PRK07774        157 LAKVGLNGLTQQLARELGGMNIRVNAIAPGPIDTEATRTV  196 (250)
T ss_pred             HHHHHHHHHHHHHHHHhCccCeEEEEEecCcccCcccccc
Confidence            9999999999999999976 59999999999999997654

>PRK12935 acetoacetyl-CoA reductase; Provisional

Probab=100.00  E-value=2.1e-31  Score=222.99  Aligned_cols=192  Identities=34%  Similarity=0.570  Sum_probs=167.1

Q ss_pred             CCCCCEEEEcCCCChHHHHHHHHHHHcCCeEEEEeC-CcchHHHHHHHHHhhCCCcEEEEEccCCCHHHHHHHHHHHHhH
Q 044010           44 DVSGKVVIITGASSGIGEHLAYEYARRGACLALCAR-REKSLEEVADTAREIGSPDVITIRADVSKVDDCRSLVEETMNH  122 (248)
Q Consensus        44 ~~~~k~~lVtGg~~gIG~aia~~l~~~G~~V~l~~r-~~~~~~~~~~~l~~~~~~~v~~~~~D~~~~~~~~~~~~~~~~~  122 (248)
                      ++++|+++||||++|||.+++++|+++|++|+++.+ +++..++..+.+++.+ .++.++.+|+++.++++++++++.++
T Consensus         3 ~~~~~~~lItG~s~~iG~~la~~l~~~g~~v~~~~~~~~~~~~~~~~~l~~~~-~~~~~~~~D~~~~~~~~~~~~~~~~~   81 (247)
T PRK12935          3 QLNGKVAIVTGGAKGIGKAITVALAQEGAKVVINYNSSKEAAENLVNELGKEG-HDVYAVQADVSKVEDANRLVEEAVNH   81 (247)
T ss_pred             CCCCCEEEEECCCCHHHHHHHHHHHHcCCEEEEEcCCcHHHHHHHHHHHHhcC-CeEEEEECCCCCHHHHHHHHHHHHHH
Confidence            478999999999999999999999999999987655 4455555556665544 36889999999999999999999999


Q ss_pred             cCCccEEEEccccCCcccccccCChHHHHHHHHhhhHHHHHHHHHHhhhhhhc-CCeEEEEcCccccccCCCCccchHHH
Q 044010          123 FGRLDHLVNNAGISSVALFEDIVNITDFKQIMNINFWGSVYTTRFAVPHLRYT-KGKIVVLSSAASWLTAPRMSFYNASK  201 (248)
Q Consensus       123 ~g~id~vv~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~-~g~iV~isS~~~~~~~~~~~~Y~~sK  201 (248)
                      ++++|++|||||........+ .+.+++++.+++|+.+++.+++.++|.|.+. .+++|++||..+..+.++...|++||
T Consensus        82 ~~~id~vi~~ag~~~~~~~~~-~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~iv~~sS~~~~~~~~~~~~Y~~sK  160 (247)
T PRK12935         82 FGKVDILVNNAGITRDRTFKK-LNREDWERVIDVNLSSVFNTTSAVLPYITEAEEGRIISISSIIGQAGGFGQTNYSAAK  160 (247)
T ss_pred             cCCCCEEEECCCCCCCCChhh-CCHHHHHHHHHHHhHHHHHHHHHHHHHHHHcCCcEEEEEcchhhcCCCCCCcchHHHH
Confidence            999999999999876554444 4779999999999999999999999998643 58999999999888888899999999


Q ss_pred             HHHHHHHHHHHHHhCC-CeEEEEEecCccccCccccc
Q 044010          202 AALVLFFETLRVELGS-DVGVTIVTPGFIESELTQGK  237 (248)
Q Consensus       202 aal~~l~~~la~~~~~-~i~v~~v~pg~v~T~~~~~~  237 (248)
                      +++++++++++.++.+ +++++.|+||+++|++....
T Consensus       161 ~a~~~~~~~l~~~~~~~~i~v~~v~pg~v~t~~~~~~  197 (247)
T PRK12935        161 AGMLGFTKSLALELAKTNVTVNAICPGFIDTEMVAEV  197 (247)
T ss_pred             HHHHHHHHHHHHHHHHcCcEEEEEEeCCCcChhhhhc
Confidence            9999999999999976 59999999999999986643

>PRK08945 putative oxoacyl-(acyl carrier protein) reductase; Provisional

Probab=100.00  E-value=2.9e-31  Score=222.40  Aligned_cols=196  Identities=26%  Similarity=0.381  Sum_probs=171.0

Q ss_pred             cCCCCCEEEEcCCCChHHHHHHHHHHHcCCeEEEEeCCcchHHHHHHHHHhhCCCcEEEEEccCC--CHHHHHHHHHHHH
Q 044010           43 EDVSGKVVIITGASSGIGEHLAYEYARRGACLALCARREKSLEEVADTAREIGSPDVITIRADVS--KVDDCRSLVEETM  120 (248)
Q Consensus        43 ~~~~~k~~lVtGg~~gIG~aia~~l~~~G~~V~l~~r~~~~~~~~~~~l~~~~~~~v~~~~~D~~--~~~~~~~~~~~~~  120 (248)
                      ..+++|+++||||+++||.+++++|+++|++|++++|+.++.++..+++++.+..++.++.+|++  +.+++.++++.+.
T Consensus         8 ~~~~~k~vlItG~~g~iG~~la~~l~~~G~~Vi~~~r~~~~~~~~~~~l~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~   87 (247)
T PRK08945          8 DLLKDRIILVTGAGDGIGREAALTYARHGATVILLGRTEEKLEAVYDEIEAAGGPQPAIIPLDLLTATPQNYQQLADTIE   87 (247)
T ss_pred             cccCCCEEEEeCCCchHHHHHHHHHHHCCCcEEEEeCCHHHHHHHHHHHHhcCCCCceEEEecccCCCHHHHHHHHHHHH
Confidence            35789999999999999999999999999999999999888777777777665556777888886  7899999999999


Q ss_pred             hHcCCccEEEEccccCCcccccccCChHHHHHHHHhhhHHHHHHHHHHhhhhhhc-CCeEEEEcCccccccCCCCccchH
Q 044010          121 NHFGRLDHLVNNAGISSVALFEDIVNITDFKQIMNINFWGSVYTTRFAVPHLRYT-KGKIVVLSSAASWLTAPRMSFYNA  199 (248)
Q Consensus       121 ~~~g~id~vv~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~-~g~iV~isS~~~~~~~~~~~~Y~~  199 (248)
                      +.++++|++|||||...........+.++|++.+++|+.+++.+++.+.+.|.+. .++||++||..+..+.+...+|++
T Consensus        88 ~~~~~id~vi~~Ag~~~~~~~~~~~~~~~~~~~~~~n~~g~~~~~~~~~~~l~~~~~~~iv~~ss~~~~~~~~~~~~Y~~  167 (247)
T PRK08945         88 EQFGRLDGVLHNAGLLGELGPMEQQDPEVWQDVMQVNVNATFMLTQALLPLLLKSPAASLVFTSSSVGRQGRANWGAYAV  167 (247)
T ss_pred             HHhCCCCEEEECCcccCCCCCcccCCHHHHHHHHHHccHHHHHHHHHHHHHHHhCCCCEEEEEccHhhcCCCCCCcccHH
Confidence            9999999999999976443222234678999999999999999999999998754 489999999998888889999999


Q ss_pred             HHHHHHHHHHHHHHHhCCC-eEEEEEecCccccCcccccc
Q 044010          200 SKAALVLFFETLRVELGSD-VGVTIVTPGFIESELTQGKF  238 (248)
Q Consensus       200 sKaal~~l~~~la~~~~~~-i~v~~v~pg~v~T~~~~~~~  238 (248)
                      ||++++++++.++.++... +++++++||+++|++....+
T Consensus       168 sK~a~~~~~~~~~~~~~~~~i~~~~v~pg~v~t~~~~~~~  207 (247)
T PRK08945        168 SKFATEGMMQVLADEYQGTNLRVNCINPGGTRTAMRASAF  207 (247)
T ss_pred             HHHHHHHHHHHHHHHhcccCEEEEEEecCCccCcchhhhc
Confidence            9999999999999999774 99999999999999865443

>TIGR03206 benzo_BadH 2-hydroxycyclohexanecarboxyl-CoA dehydrogenase

Probab=100.00  E-value=1.9e-31  Score=223.41  Aligned_cols=191  Identities=26%  Similarity=0.406  Sum_probs=170.4

Q ss_pred             CCCCEEEEcCCCChHHHHHHHHHHHcCCeEEEEeCCcchHHHHHHHHHhhCCCcEEEEEccCCCHHHHHHHHHHHHhHcC
Q 044010           45 VSGKVVIITGASSGIGEHLAYEYARRGACLALCARREKSLEEVADTAREIGSPDVITIRADVSKVDDCRSLVEETMNHFG  124 (248)
Q Consensus        45 ~~~k~~lVtGg~~gIG~aia~~l~~~G~~V~l~~r~~~~~~~~~~~l~~~~~~~v~~~~~D~~~~~~~~~~~~~~~~~~g  124 (248)
                      +++|++|||||+++||.+++++|+++|++|++++|+.+..++..+.+++.+ .++.++.+|++|.++++++++++.+.++
T Consensus         1 ~~~~~ilItGas~~iG~~la~~l~~~g~~v~~~~r~~~~~~~~~~~~~~~~-~~~~~~~~d~~~~~~~~~~~~~~~~~~~   79 (250)
T TIGR03206         1 LKDKTAIVTGGGGGIGGATCRRFAEEGAKVAVFDLNREAAEKVAADIRAKG-GNAQAFACDITDRDSVDTAVAAAEQALG   79 (250)
T ss_pred             CCCCEEEEeCCCChHHHHHHHHHHHCCCEEEEecCCHHHHHHHHHHHHhcC-CcEEEEEcCCCCHHHHHHHHHHHHHHcC
Confidence            578999999999999999999999999999999999887777777666544 3688999999999999999999999999


Q ss_pred             CccEEEEccccCCcccccccCChHHHHHHHHhhhHHHHHHHHHHhhhhhhcC-CeEEEEcCccccccCCCCccchHHHHH
Q 044010          125 RLDHLVNNAGISSVALFEDIVNITDFKQIMNINFWGSVYTTRFAVPHLRYTK-GKIVVLSSAASWLTAPRMSFYNASKAA  203 (248)
Q Consensus       125 ~id~vv~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~-g~iV~isS~~~~~~~~~~~~Y~~sKaa  203 (248)
                      ++|++||++|.....+..+ .+.+++++.+++|+.+++.+++.+.+.|++.+ +++|++||..+..+.++...|+++|++
T Consensus        80 ~~d~vi~~ag~~~~~~~~~-~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~ii~iss~~~~~~~~~~~~Y~~sK~a  158 (250)
T TIGR03206        80 PVDVLVNNAGWDKFGPFTK-TEPPLWERLIAINLTGALHMHHAVLPGMVERGAGRIVNIASDAARVGSSGEAVYAACKGG  158 (250)
T ss_pred             CCCEEEECCCCCCCCChhh-CCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcCCeEEEEECchhhccCCCCCchHHHHHHH
Confidence            9999999999865554444 46789999999999999999999999987554 799999999999888899999999999


Q ss_pred             HHHHHHHHHHHhCC-CeEEEEEecCccccCccccc
Q 044010          204 LVLFFETLRVELGS-DVGVTIVTPGFIESELTQGK  237 (248)
Q Consensus       204 l~~l~~~la~~~~~-~i~v~~v~pg~v~T~~~~~~  237 (248)
                      ++++++++++++.+ +++++.++||.++|++....
T Consensus       159 ~~~~~~~la~~~~~~~i~v~~v~pg~~~~~~~~~~  193 (250)
T TIGR03206       159 LVAFSKTMAREHARHGITVNVVCPGPTDTALLDDI  193 (250)
T ss_pred             HHHHHHHHHHHHhHhCcEEEEEecCcccchhHHhh
Confidence            99999999999976 59999999999999986543

Members of this protein family are the enzyme 2-hydroxycyclohexanecarboxyl-CoA dehydrogenase. The enzymatic properties were confirmed experimentally in Rhodopseudomonas palustris; the enzyme is homotetrameric, and not sensitive to oxygen. This enzyme is part of proposed pathway for degradation of benzoyl-CoA to 3-hydroxypimeloyl-CoA that differs from the analogous in Thauera aromatica. It also may occur in degradation of the non-aromatic compound cyclohexane-1-carboxylate.

>PRK06181 short chain dehydrogenase; Provisional

Probab=100.00  E-value=2.6e-31  Score=224.52  Aligned_cols=190  Identities=44%  Similarity=0.732  Sum_probs=170.6

Q ss_pred             CCEEEEcCCCChHHHHHHHHHHHcCCeEEEEeCCcchHHHHHHHHHhhCCCcEEEEEccCCCHHHHHHHHHHHHhHcCCc
Q 044010           47 GKVVIITGASSGIGEHLAYEYARRGACLALCARREKSLEEVADTAREIGSPDVITIRADVSKVDDCRSLVEETMNHFGRL  126 (248)
Q Consensus        47 ~k~~lVtGg~~gIG~aia~~l~~~G~~V~l~~r~~~~~~~~~~~l~~~~~~~v~~~~~D~~~~~~~~~~~~~~~~~~g~i  126 (248)
                      ++++|||||++|||.+++++|+++|++|++++|+.++.++..++++..+. ++.++.+|++|.++++++++++.++++++
T Consensus         1 ~~~vlVtGasg~iG~~la~~l~~~g~~Vi~~~r~~~~~~~~~~~l~~~~~-~~~~~~~Dl~~~~~~~~~~~~~~~~~~~i   79 (263)
T PRK06181          1 GKVVIITGASEGIGRALAVRLARAGAQLVLAARNETRLASLAQELADHGG-EALVVPTDVSDAEACERLIEAAVARFGGI   79 (263)
T ss_pred             CCEEEEecCCcHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcCC-cEEEEEccCCCHHHHHHHHHHHHHHcCCC
Confidence            47899999999999999999999999999999998877777777766553 78899999999999999999999999999


Q ss_pred             cEEEEccccCCcccccccCChHHHHHHHHhhhHHHHHHHHHHhhhhhhcCCeEEEEcCccccccCCCCccchHHHHHHHH
Q 044010          127 DHLVNNAGISSVALFEDIVNITDFKQIMNINFWGSVYTTRFAVPHLRYTKGKIVVLSSAASWLTAPRMSFYNASKAALVL  206 (248)
Q Consensus       127 d~vv~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~g~iV~isS~~~~~~~~~~~~Y~~sKaal~~  206 (248)
                      |++|||+|........+..+.+++++.+++|+.+++.+++.+.+.|.+..+++|++||..+..+.++...|+++|+++++
T Consensus        80 d~vi~~ag~~~~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~~~~~iv~~sS~~~~~~~~~~~~Y~~sK~~~~~  159 (263)
T PRK06181         80 DILVNNAGITMWSRFDELTDLSVFERVMRVNYLGAVYCTHAALPHLKASRGQIVVVSSLAGLTGVPTRSGYAASKHALHG  159 (263)
T ss_pred             CEEEECCCcccccchhccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcCCEEEEEecccccCCCCCccHHHHHHHHHHH
Confidence            99999999876665554226789999999999999999999999987677999999999998888889999999999999


Q ss_pred             HHHHHHHHhCC-CeEEEEEecCccccCccccc
Q 044010          207 FFETLRVELGS-DVGVTIVTPGFIESELTQGK  237 (248)
Q Consensus       207 l~~~la~~~~~-~i~v~~v~pg~v~T~~~~~~  237 (248)
                      ++++++.++++ +++++++.||.+.|++.+..
T Consensus       160 ~~~~l~~~~~~~~i~~~~i~pg~v~t~~~~~~  191 (263)
T PRK06181        160 FFDSLRIELADDGVAVTVVCPGFVATDIRKRA  191 (263)
T ss_pred             HHHHHHHHhhhcCceEEEEecCccccCcchhh
Confidence            99999999976 49999999999999987654

>TIGR02685 pter_reduc_Leis pteridine reductase

Probab=100.00  E-value=1.2e-31  Score=227.50  Aligned_cols=185  Identities=21%  Similarity=0.220  Sum_probs=153.7

Q ss_pred             CEEEEcCCCChHHHHHHHHHHHcCCeEEEEeC-CcchHHHHHHHHHhhCCCcEEEEEccCCCHHHH----HHHHHHHHhH
Q 044010           48 KVVIITGASSGIGEHLAYEYARRGACLALCAR-REKSLEEVADTAREIGSPDVITIRADVSKVDDC----RSLVEETMNH  122 (248)
Q Consensus        48 k~~lVtGg~~gIG~aia~~l~~~G~~V~l~~r-~~~~~~~~~~~l~~~~~~~v~~~~~D~~~~~~~----~~~~~~~~~~  122 (248)
                      ++++||||++|||++++++|+++|++|++++| +.+..+...+++....+.++.++.+|++|.+++    +++++++.+.
T Consensus         2 ~~~lITGas~gIG~~~a~~l~~~G~~V~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~Dv~d~~~~~~~~~~~~~~~~~~   81 (267)
T TIGR02685         2 PAAVVTGAAKRIGSSIAVALHQEGYRVVLHYHRSAAAASTLAAELNARRPNSAVTCQADLSNSATLFSRCEAIIDACFRA   81 (267)
T ss_pred             CEEEEeCCCCcHHHHHHHHHHhCCCeEEEEcCCcHHHHHHHHHHHHhccCCceEEEEccCCCchhhHHHHHHHHHHHHHc
Confidence            68999999999999999999999999998765 456666666767554444677899999999865    5666666677


Q ss_pred             cCCccEEEEccccCCcccccccCCh----------HHHHHHHHhhhHHHHHHHHHHhhhhhhc-------CCeEEEEcCc
Q 044010          123 FGRLDHLVNNAGISSVALFEDIVNI----------TDFKQIMNINFWGSVYTTRFAVPHLRYT-------KGKIVVLSSA  185 (248)
Q Consensus       123 ~g~id~vv~~ag~~~~~~~~~~~~~----------~~~~~~~~~n~~~~~~l~~~~~~~~~~~-------~g~iV~isS~  185 (248)
                      +|++|++|||||...+.+..+....          ++|++.+++|+.+++.+.+++.|.|++.       .++|++++|.
T Consensus        82 ~g~iD~lv~nAG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~~~~~~~~~~~~iv~~~s~  161 (267)
T TIGR02685        82 FGRCDVLVNNASAFYPTPLLRGDAGEGVGDKKSLEVQVAELFGSNAIAPYFLIKAFAQRQAGTRAEQRSTNLSIVNLCDA  161 (267)
T ss_pred             cCCceEEEECCccCCCCcccccccccccccchhhHHHHHHHHHhhhHHHHHHHHHHHHHhhhcccccCCCCeEEEEehhh
Confidence            8999999999998665444332111          3589999999999999999999988532       2689999999


Q ss_pred             cccccCCCCccchHHHHHHHHHHHHHHHHhCC-CeEEEEEecCccccC
Q 044010          186 ASWLTAPRMSFYNASKAALVLFFETLRVELGS-DVGVTIVTPGFIESE  232 (248)
Q Consensus       186 ~~~~~~~~~~~Y~~sKaal~~l~~~la~~~~~-~i~v~~v~pg~v~T~  232 (248)
                      .+..+.++..+|++||+|+++++++++.|+++ +|+|++|+||+++|+
T Consensus       162 ~~~~~~~~~~~Y~asK~a~~~~~~~la~e~~~~gi~v~~v~PG~~~~~  209 (267)
T TIGR02685       162 MTDQPLLGFTMYTMAKHALEGLTRSAALELAPLQIRVNGVAPGLSLLP  209 (267)
T ss_pred             hccCCCcccchhHHHHHHHHHHHHHHHHHHhhhCeEEEEEecCCccCc
Confidence            98888888999999999999999999999987 499999999998765

Pteridine reductase is an enzyme used by trypanosomatids (including Trypanosoma cruzi and Leishmania major) to obtain reduced pteridines by salvage rather than biosynthetic pathways. Enzymes in T. cruzi described as pteridine reductase 1 (PTR1) and pteridine reductase 2 (PTR2) have different activity profiles. PTR1 is more active with with fully oxidized biopterin and folate than with reduced forms, while PTR2 reduces dihydrobiopterin and dihydrofolate but not oxidized pteridines. T. cruzi PTR1 and PTR2 are more similar to each other in sequence than either is to the pteridine reductase of Leishmania major, and all are included in this family.

>KOG1209 consensus 1-Acyl dihydroxyacetone phosphate reductase and related dehydrogenases [Secondary metabolites biosynthesis, transport and catabolism]

Probab=100.00  E-value=1.6e-32  Score=217.15  Aligned_cols=186  Identities=33%  Similarity=0.407  Sum_probs=169.4

Q ss_pred             CCCEEEEcCCC-ChHHHHHHHHHHHcCCeEEEEeCCcchHHHHHHHHHhhCCCcEEEEEccCCCHHHHHHHHHHHHh-Hc
Q 044010           46 SGKVVIITGAS-SGIGEHLAYEYARRGACLALCARREKSLEEVADTAREIGSPDVITIRADVSKVDDCRSLVEETMN-HF  123 (248)
Q Consensus        46 ~~k~~lVtGg~-~gIG~aia~~l~~~G~~V~l~~r~~~~~~~~~~~l~~~~~~~v~~~~~D~~~~~~~~~~~~~~~~-~~  123 (248)
                      ..|.++|||++ ||||.++|+.|++.|+.|+.++|..+...++....      ++.....|+++++++.++..++++ .+
T Consensus         6 ~~k~VlItgcs~GGIG~ala~ef~~~G~~V~AtaR~~e~M~~L~~~~------gl~~~kLDV~~~~~V~~v~~evr~~~~   79 (289)
T KOG1209|consen    6 QPKKVLITGCSSGGIGYALAKEFARNGYLVYATARRLEPMAQLAIQF------GLKPYKLDVSKPEEVVTVSGEVRANPD   79 (289)
T ss_pred             CCCeEEEeecCCcchhHHHHHHHHhCCeEEEEEccccchHhhHHHhh------CCeeEEeccCChHHHHHHHHHHhhCCC
Confidence            35788899887 79999999999999999999999988877654332      477899999999999999999998 78


Q ss_pred             CCccEEEEccccCCcccccccCChHHHHHHHHhhhHHHHHHHHHHhhhhhhcCCeEEEEcCccccccCCCCccchHHHHH
Q 044010          124 GRLDHLVNNAGISSVALFEDIVNITDFKQIMNINFWGSVYTTRFAVPHLRYTKGKIVVLSSAASWLTAPRMSFYNASKAA  203 (248)
Q Consensus       124 g~id~vv~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~g~iV~isS~~~~~~~~~~~~Y~~sKaa  203 (248)
                      |++|+++||||.....+..+ .+.++.+++|++|++|.+.++|++...+.+.||.|||++|..++.|.|.-+.|.+||+|
T Consensus        80 Gkld~L~NNAG~~C~~Pa~d-~~i~ave~~f~vNvfG~irM~~a~~h~likaKGtIVnvgSl~~~vpfpf~~iYsAsKAA  158 (289)
T KOG1209|consen   80 GKLDLLYNNAGQSCTFPALD-ATIAAVEQCFKVNVFGHIRMCRALSHFLIKAKGTIVNVGSLAGVVPFPFGSIYSASKAA  158 (289)
T ss_pred             CceEEEEcCCCCCccccccc-CCHHHHHhhhccceeeeehHHHHHHHHHHHccceEEEecceeEEeccchhhhhhHHHHH
Confidence            99999999999988777666 57899999999999999999999998888899999999999999999999999999999


Q ss_pred             HHHHHHHHHHHhCC-CeEEEEEecCccccCcccccc
Q 044010          204 LVLFFETLRVELGS-DVGVTIVTPGFIESELTQGKF  238 (248)
Q Consensus       204 l~~l~~~la~~~~~-~i~v~~v~pg~v~T~~~~~~~  238 (248)
                      +.++++.|+.|++| +++|..+.||.|.|++.++-.
T Consensus       159 ihay~~tLrlEl~PFgv~Vin~itGGv~T~Ia~k~l  194 (289)
T KOG1209|consen  159 IHAYARTLRLELKPFGVRVINAITGGVATDIADKRL  194 (289)
T ss_pred             HHHhhhhcEEeeeccccEEEEecccceecccccCCC
Confidence            99999999999999 699999999999999988743

>KOG1208 consensus Dehydrogenases with different specificities (related to short-chain alcohol dehydrogenases) [Secondary metabolites biosynthesis, transport and catabolism]

Probab=100.00  E-value=7.9e-32  Score=231.76  Aligned_cols=191  Identities=31%  Similarity=0.421  Sum_probs=169.2

Q ss_pred             ccCCCCCEEEEcCCCChHHHHHHHHHHHcCCeEEEEeCCcchHHHHHHHHHh-hCCCcEEEEEccCCCHHHHHHHHHHHH
Q 044010           42 SEDVSGKVVIITGASSGIGEHLAYEYARRGACLALCARREKSLEEVADTARE-IGSPDVITIRADVSKVDDCRSLVEETM  120 (248)
Q Consensus        42 ~~~~~~k~~lVtGg~~gIG~aia~~l~~~G~~V~l~~r~~~~~~~~~~~l~~-~~~~~v~~~~~D~~~~~~~~~~~~~~~  120 (248)
                      ..++++++++|||+++|||+++|+.|+++|++|++.+|+.++.+++.+.+.. .....+.++++|+++..++.+++++..
T Consensus        30 ~~~~~~~~~vVTGansGIG~eta~~La~~Ga~Vv~~~R~~~~~~~~~~~i~~~~~~~~i~~~~lDLssl~SV~~fa~~~~  109 (314)
T KOG1208|consen   30 GIDLSGKVALVTGATSGIGFETARELALRGAHVVLACRNEERGEEAKEQIQKGKANQKIRVIQLDLSSLKSVRKFAEEFK  109 (314)
T ss_pred             cccCCCcEEEEECCCCchHHHHHHHHHhCCCEEEEEeCCHHHHHHHHHHHHhcCCCCceEEEECCCCCHHHHHHHHHHHH
Confidence            4588999999999999999999999999999999999999999999999887 344578899999999999999999999


Q ss_pred             hHcCCccEEEEccccCCcccccccCChHHHHHHHHhhhHHHHHHHHHHhhhhhhcC-CeEEEEcCcccccc---------
Q 044010          121 NHFGRLDHLVNNAGISSVALFEDIVNITDFKQIMNINFWGSVYTTRFAVPHLRYTK-GKIVVLSSAASWLT---------  190 (248)
Q Consensus       121 ~~~g~id~vv~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~-g~iV~isS~~~~~~---------  190 (248)
                      ++.+++|++|||||+..+..  . .+.|.++..|.+|+.|++.+++.++|.|++.. +|||++||......         
T Consensus       110 ~~~~~ldvLInNAGV~~~~~--~-~t~DG~E~~~~tN~lg~flLt~lLlp~lk~s~~~RIV~vsS~~~~~~~~~~~l~~~  186 (314)
T KOG1208|consen  110 KKEGPLDVLINNAGVMAPPF--S-LTKDGLELTFATNYLGHFLLTELLLPLLKRSAPSRIVNVSSILGGGKIDLKDLSGE  186 (314)
T ss_pred             hcCCCccEEEeCcccccCCc--c-cCccchhheehhhhHHHHHHHHHHHHHHhhCCCCCEEEEcCccccCccchhhccch
Confidence            99999999999999987654  2 35588999999999999999999999998655 89999999876110         


Q ss_pred             ----CCCCccchHHHHHHHHHHHHHHHHhCCCeEEEEEecCccccC-ccc
Q 044010          191 ----APRMSFYNASKAALVLFFETLRVELGSDVGVTIVTPGFIESE-LTQ  235 (248)
Q Consensus       191 ----~~~~~~Y~~sKaal~~l~~~la~~~~~~i~v~~v~pg~v~T~-~~~  235 (248)
                          +....+|+.||.++..+++.+++.+..+|.+++++||.+.|+ +.+
T Consensus       187 ~~~~~~~~~~Y~~SKla~~l~~~eL~k~l~~~V~~~~~hPG~v~t~~l~r  236 (314)
T KOG1208|consen  187 KAKLYSSDAAYALSKLANVLLANELAKRLKKGVTTYSVHPGVVKTTGLSR  236 (314)
T ss_pred             hccCccchhHHHHhHHHHHHHHHHHHHHhhcCceEEEECCCcccccceec
Confidence                223346999999999999999999977899999999999999 555

>PRK09134 short chain dehydrogenase; Provisional

Probab=100.00  E-value=3.4e-31  Score=223.39  Aligned_cols=188  Identities=23%  Similarity=0.322  Sum_probs=163.2

Q ss_pred             CCCCCEEEEcCCCChHHHHHHHHHHHcCCeEEEEeCC-cchHHHHHHHHHhhCCCcEEEEEccCCCHHHHHHHHHHHHhH
Q 044010           44 DVSGKVVIITGASSGIGEHLAYEYARRGACLALCARR-EKSLEEVADTAREIGSPDVITIRADVSKVDDCRSLVEETMNH  122 (248)
Q Consensus        44 ~~~~k~~lVtGg~~gIG~aia~~l~~~G~~V~l~~r~-~~~~~~~~~~l~~~~~~~v~~~~~D~~~~~~~~~~~~~~~~~  122 (248)
                      ...+|+++||||++|||.+++++|+++|++|+++.++ .+..++..+++...+ .++.++.+|++|.+++.++++++.+.
T Consensus         6 ~~~~k~vlItGas~giG~~la~~l~~~g~~v~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~Dl~d~~~~~~~~~~~~~~   84 (258)
T PRK09134          6 MAAPRAALVTGAARRIGRAIALDLAAHGFDVAVHYNRSRDEAEALAAEIRALG-RRAVALQADLADEAEVRALVARASAA   84 (258)
T ss_pred             CCCCCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEeCCCHHHHHHHHHHHHhcC-CeEEEEEcCCCCHHHHHHHHHHHHHH
Confidence            3468899999999999999999999999999887664 455556666665444 36889999999999999999999999


Q ss_pred             cCCccEEEEccccCCcccccccCChHHHHHHHHhhhHHHHHHHHHHhhhhhhc-CCeEEEEcCccccccCCCCccchHHH
Q 044010          123 FGRLDHLVNNAGISSVALFEDIVNITDFKQIMNINFWGSVYTTRFAVPHLRYT-KGKIVVLSSAASWLTAPRMSFYNASK  201 (248)
Q Consensus       123 ~g~id~vv~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~-~g~iV~isS~~~~~~~~~~~~Y~~sK  201 (248)
                      ++++|++|||||...+.+..+ .+.+++++.+++|+.+++.+++++.+.+.+. .+++|+++|..+..+.|.+..|++||
T Consensus        85 ~~~iD~vi~~ag~~~~~~~~~-~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~iv~~~s~~~~~~~p~~~~Y~~sK  163 (258)
T PRK09134         85 LGPITLLVNNASLFEYDSAAS-FTRASWDRHMATNLRAPFVLAQAFARALPADARGLVVNMIDQRVWNLNPDFLSYTLSK  163 (258)
T ss_pred             cCCCCEEEECCcCCCCCcccc-CCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcCCceEEEECchhhcCCCCCchHHHHHH
Confidence            999999999999876655554 4779999999999999999999999998754 48999999987777778788999999


Q ss_pred             HHHHHHHHHHHHHhCCCeEEEEEecCccccCc
Q 044010          202 AALVLFFETLRVELGSDVGVTIVTPGFIESEL  233 (248)
Q Consensus       202 aal~~l~~~la~~~~~~i~v~~v~pg~v~T~~  233 (248)
                      +++++++++++.+++++++|++|+||++.|+.
T Consensus       164 ~a~~~~~~~la~~~~~~i~v~~i~PG~v~t~~  195 (258)
T PRK09134        164 AALWTATRTLAQALAPRIRVNAIGPGPTLPSG  195 (258)
T ss_pred             HHHHHHHHHHHHHhcCCcEEEEeecccccCCc
Confidence            99999999999999777999999999998865

>PRK06057 short chain dehydrogenase; Provisional

Probab=100.00  E-value=1.8e-31  Score=224.80  Aligned_cols=189  Identities=25%  Similarity=0.368  Sum_probs=161.8

Q ss_pred             CCCCCEEEEcCCCChHHHHHHHHHHHcCCeEEEEeCCcchHHHHHHHHHhhCCCcEEEEEccCCCHHHHHHHHHHHHhHc
Q 044010           44 DVSGKVVIITGASSGIGEHLAYEYARRGACLALCARREKSLEEVADTAREIGSPDVITIRADVSKVDDCRSLVEETMNHF  123 (248)
Q Consensus        44 ~~~~k~~lVtGg~~gIG~aia~~l~~~G~~V~l~~r~~~~~~~~~~~l~~~~~~~v~~~~~D~~~~~~~~~~~~~~~~~~  123 (248)
                      .++||+++||||++|||.+++++|+++|++|++++|+.++.++..+++.      ..++.+|+++.++++++++++.+..
T Consensus         4 ~~~~~~vlItGasggIG~~~a~~l~~~G~~v~~~~r~~~~~~~~~~~~~------~~~~~~D~~~~~~~~~~~~~~~~~~   77 (255)
T PRK06057          4 RLAGRVAVITGGGSGIGLATARRLAAEGATVVVGDIDPEAGKAAADEVG------GLFVPTDVTDEDAVNALFDTAAETY   77 (255)
T ss_pred             cCCCCEEEEECCCchHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHHcC------CcEEEeeCCCHHHHHHHHHHHHHHc
Confidence            5789999999999999999999999999999999998776555444431      2578999999999999999999989


Q ss_pred             CCccEEEEccccCCcc-cccccCChHHHHHHHHhhhHHHHHHHHHHhhhhhhc-CCeEEEEcCccccccC-CCCccchHH
Q 044010          124 GRLDHLVNNAGISSVA-LFEDIVNITDFKQIMNINFWGSVYTTRFAVPHLRYT-KGKIVVLSSAASWLTA-PRMSFYNAS  200 (248)
Q Consensus       124 g~id~vv~~ag~~~~~-~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~-~g~iV~isS~~~~~~~-~~~~~Y~~s  200 (248)
                      +++|++|||||...+. ......+.+++++.+++|+.+++.+++.++|.|+++ +|++|++||..+..+. ++...|++|
T Consensus        78 ~~id~vi~~ag~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~g~iv~~sS~~~~~g~~~~~~~Y~~s  157 (255)
T PRK06057         78 GSVDIAFNNAGISPPEDDSILNTGLDAWQRVQDVNLTSVYLCCKAALPHMVRQGKGSIINTASFVAVMGSATSQISYTAS  157 (255)
T ss_pred             CCCCEEEECCCcCCCCCCCcccCCHHHHHHHHHHhcHHHHHHHHHHHHHHHHhCCcEEEEEcchhhccCCCCCCcchHHH
Confidence            9999999999976432 222235778999999999999999999999998744 5899999998776665 367789999


Q ss_pred             HHHHHHHHHHHHHHhCC-CeEEEEEecCccccCcccccc
Q 044010          201 KAALVLFFETLRVELGS-DVGVTIVTPGFIESELTQGKF  238 (248)
Q Consensus       201 Kaal~~l~~~la~~~~~-~i~v~~v~pg~v~T~~~~~~~  238 (248)
                      |++++++++.++.++.+ +++|++|+||+++|++....+
T Consensus       158 Kaal~~~~~~l~~~~~~~gi~v~~i~pg~v~t~~~~~~~  196 (255)
T PRK06057        158 KGGVLAMSRELGVQFARQGIRVNALCPGPVNTPLLQELF  196 (255)
T ss_pred             HHHHHHHHHHHHHHHHhhCcEEEEEeeCCcCCchhhhhc
Confidence            99999999999999976 599999999999999876543

>PRK07453 protochlorophyllide oxidoreductase; Validated

Probab=100.00  E-value=2.8e-31  Score=231.10  Aligned_cols=193  Identities=24%  Similarity=0.282  Sum_probs=161.0

Q ss_pred             cCCCCCEEEEcCCCChHHHHHHHHHHHcCCeEEEEeCCcchHHHHHHHHHhhCCCcEEEEEccCCCHHHHHHHHHHHHhH
Q 044010           43 EDVSGKVVIITGASSGIGEHLAYEYARRGACLALCARREKSLEEVADTAREIGSPDVITIRADVSKVDDCRSLVEETMNH  122 (248)
Q Consensus        43 ~~~~~k~~lVtGg~~gIG~aia~~l~~~G~~V~l~~r~~~~~~~~~~~l~~~~~~~v~~~~~D~~~~~~~~~~~~~~~~~  122 (248)
                      .++++|+++||||++|||.+++++|+++|++|++++|+.++.++..+++... +.++.++.+|++|.++++++++++.+.
T Consensus         2 ~~~~~k~vlVTGas~gIG~~~a~~L~~~G~~V~~~~r~~~~~~~~~~~l~~~-~~~~~~~~~Dl~~~~~v~~~~~~~~~~   80 (322)
T PRK07453          2 SQDAKGTVIITGASSGVGLYAAKALAKRGWHVIMACRNLKKAEAAAQELGIP-PDSYTIIHIDLGDLDSVRRFVDDFRAL   80 (322)
T ss_pred             CCCCCCEEEEEcCCChHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHhhcc-CCceEEEEecCCCHHHHHHHHHHHHHh
Confidence            3567999999999999999999999999999999999988888777776533 336889999999999999999998777


Q ss_pred             cCCccEEEEccccCCcccccccCChHHHHHHHHhhhHHHHHHHHHHhhhhhhcC---CeEEEEcCccccc----------
Q 044010          123 FGRLDHLVNNAGISSVALFEDIVNITDFKQIMNINFWGSVYTTRFAVPHLRYTK---GKIVVLSSAASWL----------  189 (248)
Q Consensus       123 ~g~id~vv~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~---g~iV~isS~~~~~----------  189 (248)
                      ++++|++|||||+..+.......+.++++..+++|+.|++.+++.++|.|++.+   ++||++||.....          
T Consensus        81 ~~~iD~li~nAg~~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~~~~~~~~~~riV~vsS~~~~~~~~~~~~~~~  160 (322)
T PRK07453         81 GKPLDALVCNAAVYMPLLKEPLRSPQGYELSMATNHLGHFLLCNLLLEDLKKSPAPDPRLVILGTVTANPKELGGKIPIP  160 (322)
T ss_pred             CCCccEEEECCcccCCCCCCCCCCHHHHHHHHhHHHHHHHHHHHHHHHHHHhCCCCCceEEEEcccccCccccCCccCCC
Confidence            789999999999764322111246789999999999999999999999997553   5999999965432          


Q ss_pred             -------------------------cCCCCccchHHHHHHHHHHHHHHHHhC-C-CeEEEEEecCcc-ccCcccc
Q 044010          190 -------------------------TAPRMSFYNASKAALVLFFETLRVELG-S-DVGVTIVTPGFI-ESELTQG  236 (248)
Q Consensus       190 -------------------------~~~~~~~Y~~sKaal~~l~~~la~~~~-~-~i~v~~v~pg~v-~T~~~~~  236 (248)
                                               +..+..+|+.||.+.+.+++.+++++. . +|+|++++||.| .|++.++
T Consensus       161 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~SK~a~~~~~~~la~~~~~~~gi~v~~v~PG~v~~t~~~~~  235 (322)
T PRK07453        161 APADLGDLSGFEAGFKAPISMADGKKFKPGKAYKDSKLCNMLTMRELHRRYHESTGITFSSLYPGCVADTPLFRN  235 (322)
T ss_pred             CccchhhhhcchhcccccccccCccCCCccchhhHhHHHHHHHHHHHHHhhcccCCeEEEEecCCcccCCccccc
Confidence                                     012346799999999999999999994 3 599999999999 5888654

>PRK07201 short chain dehydrogenase; Provisional

Probab=100.00  E-value=1.4e-31  Score=253.27  Aligned_cols=193  Identities=33%  Similarity=0.451  Sum_probs=172.2

Q ss_pred             cCCCCCEEEEcCCCChHHHHHHHHHHHcCCeEEEEeCCcchHHHHHHHHHhhCCCcEEEEEccCCCHHHHHHHHHHHHhH
Q 044010           43 EDVSGKVVIITGASSGIGEHLAYEYARRGACLALCARREKSLEEVADTAREIGSPDVITIRADVSKVDDCRSLVEETMNH  122 (248)
Q Consensus        43 ~~~~~k~~lVtGg~~gIG~aia~~l~~~G~~V~l~~r~~~~~~~~~~~l~~~~~~~v~~~~~D~~~~~~~~~~~~~~~~~  122 (248)
                      .++++|+++||||++|||.+++++|+++|++|++++|++++.++..+++.+.+. ++.++.+|++|.++++++++++.++
T Consensus       367 ~~~~~k~vlItGas~giG~~la~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~-~~~~~~~Dv~~~~~~~~~~~~~~~~  445 (657)
T PRK07201        367 GPLVGKVVLITGASSGIGRATAIKVAEAGATVFLVARNGEALDELVAEIRAKGG-TAHAYTCDLTDSAAVDHTVKDILAE  445 (657)
T ss_pred             cCCCCCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHhcCC-cEEEEEecCCCHHHHHHHHHHHHHh
Confidence            367899999999999999999999999999999999999888888777766543 7889999999999999999999999


Q ss_pred             cCCccEEEEccccCCcccccccC-ChHHHHHHHHhhhHHHHHHHHHHhhhhhhcC-CeEEEEcCccccccCCCCccchHH
Q 044010          123 FGRLDHLVNNAGISSVALFEDIV-NITDFKQIMNINFWGSVYTTRFAVPHLRYTK-GKIVVLSSAASWLTAPRMSFYNAS  200 (248)
Q Consensus       123 ~g~id~vv~~ag~~~~~~~~~~~-~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~-g~iV~isS~~~~~~~~~~~~Y~~s  200 (248)
                      +|++|++|||||........+.. +.+++++.+++|+.+++.+++.++|.|++.+ |+||++||.++..+.++.+.|++|
T Consensus       446 ~g~id~li~~Ag~~~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~~~g~iv~isS~~~~~~~~~~~~Y~~s  525 (657)
T PRK07201        446 HGHVDYLVNNAGRSIRRSVENSTDRFHDYERTMAVNYFGAVRLILGLLPHMRERRFGHVVNVSSIGVQTNAPRFSAYVAS  525 (657)
T ss_pred             cCCCCEEEECCCCCCCCChhhcCCCHHHHHHHHHHHHHHHHHHHHHHHHhhhhcCCCEEEEECChhhcCCCCCcchHHHH
Confidence            99999999999976544333221 2578999999999999999999999987554 899999999999888889999999


Q ss_pred             HHHHHHHHHHHHHHhCC-CeEEEEEecCccccCcccc
Q 044010          201 KAALVLFFETLRVELGS-DVGVTIVTPGFIESELTQG  236 (248)
Q Consensus       201 Kaal~~l~~~la~~~~~-~i~v~~v~pg~v~T~~~~~  236 (248)
                      |+++++++++++.|+++ +|+|++|+||+++|+|...
T Consensus       526 K~a~~~~~~~la~e~~~~~i~v~~v~pg~v~T~~~~~  562 (657)
T PRK07201        526 KAALDAFSDVAASETLSDGITFTTIHMPLVRTPMIAP  562 (657)
T ss_pred             HHHHHHHHHHHHHHHHhhCCcEEEEECCcCcccccCc
Confidence            99999999999999976 5999999999999999764

>PRK09186 flagellin modification protein A; Provisional

Probab=100.00  E-value=3.5e-31  Score=222.65  Aligned_cols=189  Identities=21%  Similarity=0.299  Sum_probs=160.7

Q ss_pred             CCCCEEEEcCCCChHHHHHHHHHHHcCCeEEEEeCCcchHHHHHHHHHhh-CCCcEEEEEccCCCHHHHHHHHHHHHhHc
Q 044010           45 VSGKVVIITGASSGIGEHLAYEYARRGACLALCARREKSLEEVADTAREI-GSPDVITIRADVSKVDDCRSLVEETMNHF  123 (248)
Q Consensus        45 ~~~k~~lVtGg~~gIG~aia~~l~~~G~~V~l~~r~~~~~~~~~~~l~~~-~~~~v~~~~~D~~~~~~~~~~~~~~~~~~  123 (248)
                      +++|+++||||++|||+++|++|+++|++|++++|+.++.++..+++.+. +...+.++.+|++|.+++.++++++.+++
T Consensus         2 ~~~k~vlItGas~giG~~~a~~l~~~g~~v~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~Dl~d~~~~~~~~~~~~~~~   81 (256)
T PRK09186          2 LKGKTILITGAGGLIGSALVKAILEAGGIVIAADIDKEALNELLESLGKEFKSKKLSLVELDITDQESLEEFLSKSAEKY   81 (256)
T ss_pred             CCCCEEEEECCCchHHHHHHHHHHHCCCEEEEEecChHHHHHHHHHHHhhcCCCceeEEEecCCCHHHHHHHHHHHHHHc
Confidence            57899999999999999999999999999999999988888777777543 33356677999999999999999999999


Q ss_pred             CCccEEEEccccCC---cccccccCChHHHHHHHHhhhHHHHHHHHHHhhhhhhc-CCeEEEEcCccccccCC-------
Q 044010          124 GRLDHLVNNAGISS---VALFEDIVNITDFKQIMNINFWGSVYTTRFAVPHLRYT-KGKIVVLSSAASWLTAP-------  192 (248)
Q Consensus       124 g~id~vv~~ag~~~---~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~-~g~iV~isS~~~~~~~~-------  192 (248)
                      +++|++|||||...   ..+..+ .+.+++++.+++|+.+++.+++.++|.|+++ .++||++||..+..+..       
T Consensus        82 ~~id~vi~~A~~~~~~~~~~~~~-~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~~iv~~sS~~~~~~~~~~~~~~~  160 (256)
T PRK09186         82 GKIDGAVNCAYPRNKDYGKKFFD-VSLDDFNENLSLHLGSSFLFSQQFAKYFKKQGGGNLVNISSIYGVVAPKFEIYEGT  160 (256)
T ss_pred             CCccEEEECCccccccccCcccc-CCHHHHHHHHHHhhhhHHHHHHHHHHHHHhcCCceEEEEechhhhccccchhcccc
Confidence            99999999998543   223333 5789999999999999999999999999754 38999999987654311       


Q ss_pred             ---CCccchHHHHHHHHHHHHHHHHhCC-CeEEEEEecCccccCcc
Q 044010          193 ---RMSFYNASKAALVLFFETLRVELGS-DVGVTIVTPGFIESELT  234 (248)
Q Consensus       193 ---~~~~Y~~sKaal~~l~~~la~~~~~-~i~v~~v~pg~v~T~~~  234 (248)
                         ....|++||+++++++++++.++.+ +|+|++|+||.+.|+..
T Consensus       161 ~~~~~~~Y~~sK~a~~~l~~~la~e~~~~~i~v~~i~Pg~~~~~~~  206 (256)
T PRK09186        161 SMTSPVEYAAIKAGIIHLTKYLAKYFKDSNIRVNCVSPGGILDNQP  206 (256)
T ss_pred             ccCCcchhHHHHHHHHHHHHHHHHHhCcCCeEEEEEecccccCCCC
Confidence               2246999999999999999999977 49999999999988753

>PRK07102 short chain dehydrogenase; Provisional

Probab=100.00  E-value=2.7e-31  Score=222.04  Aligned_cols=186  Identities=28%  Similarity=0.313  Sum_probs=165.1

Q ss_pred             CEEEEcCCCChHHHHHHHHHHHcCCeEEEEeCCcchHHHHHHHHHhhCCCcEEEEEccCCCHHHHHHHHHHHHhHcCCcc
Q 044010           48 KVVIITGASSGIGEHLAYEYARRGACLALCARREKSLEEVADTAREIGSPDVITIRADVSKVDDCRSLVEETMNHFGRLD  127 (248)
Q Consensus        48 k~~lVtGg~~gIG~aia~~l~~~G~~V~l~~r~~~~~~~~~~~l~~~~~~~v~~~~~D~~~~~~~~~~~~~~~~~~g~id  127 (248)
                      |+++||||++|||.+++++|+++|++|++++|++++.++..+++...++.++.++++|++|.++++++++++.+   ++|
T Consensus         2 ~~vlItGas~giG~~~a~~l~~~G~~Vi~~~r~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~---~~d   78 (243)
T PRK07102          2 KKILIIGATSDIARACARRYAAAGARLYLAARDVERLERLADDLRARGAVAVSTHELDILDTASHAAFLDSLPA---LPD   78 (243)
T ss_pred             cEEEEEcCCcHHHHHHHHHHHhcCCEEEEEeCCHHHHHHHHHHHHHhcCCeEEEEecCCCChHHHHHHHHHHhh---cCC
Confidence            68999999999999999999999999999999998877777777665555789999999999999999998754   479


Q ss_pred             EEEEccccCCcccccccCChHHHHHHHHhhhHHHHHHHHHHhhhhhhc-CCeEEEEcCccccccCCCCccchHHHHHHHH
Q 044010          128 HLVNNAGISSVALFEDIVNITDFKQIMNINFWGSVYTTRFAVPHLRYT-KGKIVVLSSAASWLTAPRMSFYNASKAALVL  206 (248)
Q Consensus       128 ~vv~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~-~g~iV~isS~~~~~~~~~~~~Y~~sKaal~~  206 (248)
                      ++|||+|........+ .+.+++.+.+++|+.+++.+++.+.|.|.+. .+++|++||..+..+.++...|+++|+++++
T Consensus        79 ~vv~~ag~~~~~~~~~-~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~iv~~sS~~~~~~~~~~~~Y~~sK~a~~~  157 (243)
T PRK07102         79 IVLIAVGTLGDQAACE-ADPALALREFRTNFEGPIALLTLLANRFEARGSGTIVGISSVAGDRGRASNYVYGSAKAALTA  157 (243)
T ss_pred             EEEECCcCCCCccccc-CCHHHHHHHHHhhhHHHHHHHHHHHHHHHhCCCCEEEEEecccccCCCCCCcccHHHHHHHHH
Confidence            9999999776555444 4789999999999999999999999998754 4899999999988888888999999999999


Q ss_pred             HHHHHHHHhCC-CeEEEEEecCccccCccccc
Q 044010          207 FFETLRVELGS-DVGVTIVTPGFIESELTQGK  237 (248)
Q Consensus       207 l~~~la~~~~~-~i~v~~v~pg~v~T~~~~~~  237 (248)
                      ++++++.++.+ +++|++|+||+++|++..+.
T Consensus       158 ~~~~l~~el~~~gi~v~~v~pg~v~t~~~~~~  189 (243)
T PRK07102        158 FLSGLRNRLFKSGVHVLTVKPGFVRTPMTAGL  189 (243)
T ss_pred             HHHHHHHHhhccCcEEEEEecCcccChhhhcc
Confidence            99999999977 59999999999999987654

>PRK06947 glucose-1-dehydrogenase; Provisional

Probab=100.00  E-value=3.8e-31  Score=221.55  Aligned_cols=188  Identities=36%  Similarity=0.469  Sum_probs=160.3

Q ss_pred             CCEEEEcCCCChHHHHHHHHHHHcCCeEEEEe-CCcchHHHHHHHHHhhCCCcEEEEEccCCCHHHHHHHHHHHHhHcCC
Q 044010           47 GKVVIITGASSGIGEHLAYEYARRGACLALCA-RREKSLEEVADTAREIGSPDVITIRADVSKVDDCRSLVEETMNHFGR  125 (248)
Q Consensus        47 ~k~~lVtGg~~gIG~aia~~l~~~G~~V~l~~-r~~~~~~~~~~~l~~~~~~~v~~~~~D~~~~~~~~~~~~~~~~~~g~  125 (248)
                      .|+++||||++|||.+++++|+++|++|+++. |+.++.+...++++..+ .++.++.||+++.++++++++++.+.+++
T Consensus         2 ~k~ilItGas~giG~~la~~l~~~g~~v~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~Dl~~~~~~~~~~~~~~~~~~~   80 (248)
T PRK06947          2 RKVVLITGASRGIGRATAVLAAARGWSVGINYARDAAAAEETADAVRAAG-GRACVVAGDVANEADVIAMFDAVQSAFGR   80 (248)
T ss_pred             CcEEEEeCCCCcHHHHHHHHHHHCCCEEEEEeCCCHHHHHHHHHHHHhcC-CcEEEEEeccCCHHHHHHHHHHHHHhcCC
Confidence            36899999999999999999999999988764 56666666666665544 37889999999999999999999988999


Q ss_pred             ccEEEEccccCCcccccccCChHHHHHHHHhhhHHHHHHHHHHhhhhhhc----CCeEEEEcCccccccCCC-CccchHH
Q 044010          126 LDHLVNNAGISSVALFEDIVNITDFKQIMNINFWGSVYTTRFAVPHLRYT----KGKIVVLSSAASWLTAPR-MSFYNAS  200 (248)
Q Consensus       126 id~vv~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~----~g~iV~isS~~~~~~~~~-~~~Y~~s  200 (248)
                      +|++|||||...+.....+.+.+++++.+++|+.+++.+++.+.+.+..+    .+++|++||..+..+.+. +..|++|
T Consensus        81 id~li~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~~~ii~~sS~~~~~~~~~~~~~Y~~s  160 (248)
T PRK06947         81 LDALVNNAGIVAPSMPLADMDAARLRRMFDTNVLGAYLCAREAARRLSTDRGGRGGAIVNVSSIASRLGSPNEYVDYAGS  160 (248)
T ss_pred             CCEEEECCccCCCCCChhhCCHHHHHHHHHhccHHHHHHHHHHHHHHHhcCCCCCcEEEEECchhhcCCCCCCCcccHhh
Confidence            99999999986543322335779999999999999999999999987543    368999999888777654 5789999


Q ss_pred             HHHHHHHHHHHHHHhCC-CeEEEEEecCccccCccc
Q 044010          201 KAALVLFFETLRVELGS-DVGVTIVTPGFIESELTQ  235 (248)
Q Consensus       201 Kaal~~l~~~la~~~~~-~i~v~~v~pg~v~T~~~~  235 (248)
                      |+++++++++++.++++ +++|++|+||+++|++..
T Consensus       161 K~~~~~~~~~la~~~~~~~i~v~~i~Pg~v~t~~~~  196 (248)
T PRK06947        161 KGAVDTLTLGLAKELGPHGVRVNAVRPGLIETEIHA  196 (248)
T ss_pred             HHHHHHHHHHHHHHhhhhCcEEEEEeccCccccccc
Confidence            99999999999999976 599999999999999864

>PRK12746 short chain dehydrogenase; Provisional

Probab=100.00  E-value=4.8e-31  Score=221.71  Aligned_cols=191  Identities=30%  Similarity=0.492  Sum_probs=166.3

Q ss_pred             CCCCCEEEEcCCCChHHHHHHHHHHHcCCeEEEE-eCCcchHHHHHHHHHhhCCCcEEEEEccCCCHHHHHHHHHHHHhH
Q 044010           44 DVSGKVVIITGASSGIGEHLAYEYARRGACLALC-ARREKSLEEVADTAREIGSPDVITIRADVSKVDDCRSLVEETMNH  122 (248)
Q Consensus        44 ~~~~k~~lVtGg~~gIG~aia~~l~~~G~~V~l~-~r~~~~~~~~~~~l~~~~~~~v~~~~~D~~~~~~~~~~~~~~~~~  122 (248)
                      ++++|+++||||++|||.++|++|+++|++|++. .|+.++.++..+++...+ .++.++.+|++|.+++.++++++.++
T Consensus         3 ~~~~~~ilItGasg~iG~~la~~l~~~G~~v~i~~~r~~~~~~~~~~~~~~~~-~~~~~~~~D~~d~~~i~~~~~~~~~~   81 (254)
T PRK12746          3 NLDGKVALVTGASRGIGRAIAMRLANDGALVAIHYGRNKQAADETIREIESNG-GKAFLIEADLNSIDGVKKLVEQLKNE   81 (254)
T ss_pred             CCCCCEEEEeCCCchHHHHHHHHHHHCCCEEEEEcCCCHHHHHHHHHHHHhcC-CcEEEEEcCcCCHHHHHHHHHHHHHH
Confidence            5789999999999999999999999999998774 677766666666665433 36888999999999999999999887


Q ss_pred             c------CCccEEEEccccCCcccccccCChHHHHHHHHhhhHHHHHHHHHHhhhhhhcCCeEEEEcCccccccCCCCcc
Q 044010          123 F------GRLDHLVNNAGISSVALFEDIVNITDFKQIMNINFWGSVYTTRFAVPHLRYTKGKIVVLSSAASWLTAPRMSF  196 (248)
Q Consensus       123 ~------g~id~vv~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~g~iV~isS~~~~~~~~~~~~  196 (248)
                      +      +++|++|||||...+....+ .+.+.|++.+++|+.+++.+++.+.+.+. ..+++|++||..+..+.++...
T Consensus        82 ~~~~~~~~~id~vi~~ag~~~~~~~~~-~~~~~~~~~~~~n~~~~~~l~~~~~~~~~-~~~~~v~~sS~~~~~~~~~~~~  159 (254)
T PRK12746         82 LQIRVGTSEIDILVNNAGIGTQGTIEN-TTEEIFDEIMAVNIKAPFFLIQQTLPLLR-AEGRVINISSAEVRLGFTGSIA  159 (254)
T ss_pred             hccccCCCCccEEEECCCCCCCCChhh-CCHHHHHHHHHHHhHHHHHHHHHHHHHhh-cCCEEEEECCHHhcCCCCCCcc
Confidence            7      47999999999876655444 46789999999999999999999999885 4479999999998888889999


Q ss_pred             chHHHHHHHHHHHHHHHHhCC-CeEEEEEecCccccCccccc
Q 044010          197 YNASKAALVLFFETLRVELGS-DVGVTIVTPGFIESELTQGK  237 (248)
Q Consensus       197 Y~~sKaal~~l~~~la~~~~~-~i~v~~v~pg~v~T~~~~~~  237 (248)
                      |++||++++.+++++++++.+ ++++++++||+++|++....
T Consensus       160 Y~~sK~a~~~~~~~~~~~~~~~~i~v~~v~pg~~~t~~~~~~  201 (254)
T PRK12746        160 YGLSKGALNTMTLPLAKHLGERGITVNTIMPGYTKTDINAKL  201 (254)
T ss_pred             hHhhHHHHHHHHHHHHHHHhhcCcEEEEEEECCccCcchhhh
Confidence            999999999999999999976 49999999999999987643

>COG1028 FabG Dehydrogenases with different specificities (related to short-chain alcohol dehydrogenases) [Secondary metabolites biosynthesis, transport, and catabolism / General function prediction only]

Probab=100.00  E-value=5.2e-31  Score=221.14  Aligned_cols=191  Identities=37%  Similarity=0.574  Sum_probs=164.4

Q ss_pred             CCCCCEEEEcCCCChHHHHHHHHHHHcCCeEEEEeCCcch--HHHHHHHHHhhCC-CcEEEEEccCCC-HHHHHHHHHHH
Q 044010           44 DVSGKVVIITGASSGIGEHLAYEYARRGACLALCARREKS--LEEVADTAREIGS-PDVITIRADVSK-VDDCRSLVEET  119 (248)
Q Consensus        44 ~~~~k~~lVtGg~~gIG~aia~~l~~~G~~V~l~~r~~~~--~~~~~~~l~~~~~-~~v~~~~~D~~~-~~~~~~~~~~~  119 (248)
                      ++++|+++||||++|||+++|++|+++|++|+++.|+.+.  .+...+... ..+ ..+.+..+|+++ .++++.+++.+
T Consensus         2 ~~~~~~ilITGas~GiG~aia~~l~~~G~~v~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~Dvs~~~~~v~~~~~~~   80 (251)
T COG1028           2 DLSGKVALVTGASSGIGRAIARALAREGARVVVAARRSEEEAAEALAAAIK-EAGGGRAAAVAADVSDDEESVEALVAAA   80 (251)
T ss_pred             CCCCCEEEEeCCCCHHHHHHHHHHHHCCCeEEEEcCCCchhhHHHHHHHHH-hcCCCcEEEEEecCCCCHHHHHHHHHHH
Confidence            5789999999999999999999999999998888887664  344444443 222 257788899998 99999999999


Q ss_pred             HhHcCCccEEEEccccCCcc-cccccCChHHHHHHHHhhhHHHHHHHHHHhhhhhhcCCeEEEEcCccccccCCC-Cccc
Q 044010          120 MNHFGRLDHLVNNAGISSVA-LFEDIVNITDFKQIMNINFWGSVYTTRFAVPHLRYTKGKIVVLSSAASWLTAPR-MSFY  197 (248)
Q Consensus       120 ~~~~g~id~vv~~ag~~~~~-~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~g~iV~isS~~~~~~~~~-~~~Y  197 (248)
                      .+++|++|++|||||..... +..+ .+.++|++.+++|+.+++.+.+.+.|.+++ + +||++||..+. +.++ +++|
T Consensus        81 ~~~~g~id~lvnnAg~~~~~~~~~~-~~~~~~~~~~~~n~~g~~~~~~~~~~~~~~-~-~Iv~isS~~~~-~~~~~~~~Y  156 (251)
T COG1028          81 EEEFGRIDILVNNAGIAGPDAPLEE-LTEEDWDRVIDVNLLGAFLLTRAALPLMKK-Q-RIVNISSVAGL-GGPPGQAAY  156 (251)
T ss_pred             HHHcCCCCEEEECCCCCCCCCChhh-CCHHHHHHHHHHhHHHHHHHHHHHHHhhhh-C-eEEEECCchhc-CCCCCcchH
Confidence            99999999999999998763 5555 467999999999999999999988888874 3 99999999998 7777 4999


Q ss_pred             hHHHHHHHHHHHHHHHHhCC-CeEEEEEecCccccCccccccc
Q 044010          198 NASKAALVLFFETLRVELGS-DVGVTIVTPGFIESELTQGKFL  239 (248)
Q Consensus       198 ~~sKaal~~l~~~la~~~~~-~i~v~~v~pg~v~T~~~~~~~~  239 (248)
                      ++||+|+++|+++++.|+.+ +|+|++|+||.++|++......
T Consensus       157 ~~sK~al~~~~~~l~~e~~~~gi~v~~v~PG~~~t~~~~~~~~  199 (251)
T COG1028         157 AASKAALIGLTKALALELAPRGIRVNAVAPGYIDTPMTAALES  199 (251)
T ss_pred             HHHHHHHHHHHHHHHHHHhhhCcEEEEEEeccCCCcchhhhhh
Confidence            99999999999999999876 5999999999999999886543

>KOG1611 consensus Predicted short chain-type dehydrogenase [General function prediction only]

Probab=100.00  E-value=2e-31  Score=213.04  Aligned_cols=189  Identities=28%  Similarity=0.353  Sum_probs=156.6

Q ss_pred             CCCEEEEcCCCChHHHHHHHHHHHc-CCeEEEEe-CCcchHHHHHHHH--HhhCCCcEEEEEccCCCHHHHHHHHHHHHh
Q 044010           46 SGKVVIITGASSGIGEHLAYEYARR-GACLALCA-RREKSLEEVADTA--REIGSPDVITIRADVSKVDDCRSLVEETMN  121 (248)
Q Consensus        46 ~~k~~lVtGg~~gIG~aia~~l~~~-G~~V~l~~-r~~~~~~~~~~~l--~~~~~~~v~~~~~D~~~~~~~~~~~~~~~~  121 (248)
                      +-|.++||||++|||+.++++|++. |.++++.. |+++++   .+++  ..+.+.+++.+++|+++.++++++++++.+
T Consensus         2 spksv~ItGaNRGIGlgLVk~llk~~~i~~iiat~r~~e~a---~~~l~~k~~~d~rvHii~Ldvt~deS~~~~~~~V~~   78 (249)
T KOG1611|consen    2 SPKSVFITGANRGIGLGLVKELLKDKGIEVIIATARDPEKA---ATELALKSKSDSRVHIIQLDVTCDESIDNFVQEVEK   78 (249)
T ss_pred             CCccEEEeccCcchhHHHHHHHhcCCCcEEEEEecCChHHh---hHHHHHhhccCCceEEEEEecccHHHHHHHHHHHHh
Confidence            4466999999999999999999976 66665554 456554   3333  333456899999999999999999999988


Q ss_pred             Hc--CCccEEEEccccCCcccccccCChHHHHHHHHhhhHHHHHHHHHHhhhhhhcC------------CeEEEEcCccc
Q 044010          122 HF--GRLDHLVNNAGISSVALFEDIVNITDFKQIMNINFWGSVYTTRFAVPHLRYTK------------GKIVVLSSAAS  187 (248)
Q Consensus       122 ~~--g~id~vv~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~------------g~iV~isS~~~  187 (248)
                      ..  ..+|+++||||+..+......++.+.|.+.+++|..|++.+.|+|+|++++.+            +.|||+||.++
T Consensus        79 iVg~~GlnlLinNaGi~~~y~~~~~~~r~~~~~~~~tN~v~~il~~Q~~lPLLkkaas~~~gd~~s~~raaIinisS~~~  158 (249)
T KOG1611|consen   79 IVGSDGLNLLINNAGIALSYNTVLKPSRAVLLEQYETNAVGPILLTQAFLPLLKKAASKVSGDGLSVSRAAIINISSSAG  158 (249)
T ss_pred             hcccCCceEEEeccceeeecccccCCcHHHHHHHhhhcchhHHHHHHHHHHHHHHHhhcccCCcccccceeEEEeecccc
Confidence            74  47999999999887666555567788999999999999999999999997543            37999988776


Q ss_pred             ccc---CCCCccchHHHHHHHHHHHHHHHHhCCC-eEEEEEecCccccCccccc
Q 044010          188 WLT---APRMSFYNASKAALVLFFETLRVELGSD-VGVTIVTPGFIESELTQGK  237 (248)
Q Consensus       188 ~~~---~~~~~~Y~~sKaal~~l~~~la~~~~~~-i~v~~v~pg~v~T~~~~~~  237 (248)
                      ..+   ..++.+|.+||+|++.++|+++.|+++. |-|..+|||||+|+|....
T Consensus       159 s~~~~~~~~~~AYrmSKaAlN~f~ksls~dL~~~~ilv~sihPGwV~TDMgg~~  212 (249)
T KOG1611|consen  159 SIGGFRPGGLSAYRMSKAALNMFAKSLSVDLKDDHILVVSIHPGWVQTDMGGKK  212 (249)
T ss_pred             ccCCCCCcchhhhHhhHHHHHHHHHHhhhhhcCCcEEEEEecCCeEEcCCCCCC
Confidence            543   2456799999999999999999999885 9999999999999998743

>PRK07775 short chain dehydrogenase; Provisional

Probab=100.00  E-value=8e-31  Score=223.32  Aligned_cols=191  Identities=27%  Similarity=0.424  Sum_probs=168.3

Q ss_pred             cCCCCCEEEEcCCCChHHHHHHHHHHHcCCeEEEEeCCcchHHHHHHHHHhhCCCcEEEEEccCCCHHHHHHHHHHHHhH
Q 044010           43 EDVSGKVVIITGASSGIGEHLAYEYARRGACLALCARREKSLEEVADTAREIGSPDVITIRADVSKVDDCRSLVEETMNH  122 (248)
Q Consensus        43 ~~~~~k~~lVtGg~~gIG~aia~~l~~~G~~V~l~~r~~~~~~~~~~~l~~~~~~~v~~~~~D~~~~~~~~~~~~~~~~~  122 (248)
                      .++++|+++||||+++||++++++|+++|++|++++|+.++.++..+++...+. ++.++.+|+++++++.++++++.+.
T Consensus         6 ~~~~~~~vlVtGa~g~iG~~la~~L~~~G~~V~~~~r~~~~~~~~~~~~~~~~~-~~~~~~~Dl~~~~~~~~~~~~~~~~   84 (274)
T PRK07775          6 PHPDRRPALVAGASSGIGAATAIELAAAGFPVALGARRVEKCEELVDKIRADGG-EAVAFPLDVTDPDSVKSFVAQAEEA   84 (274)
T ss_pred             CCCCCCEEEEECCCchHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcCC-eEEEEECCCCCHHHHHHHHHHHHHh
Confidence            467789999999999999999999999999999999988777766666655443 6888999999999999999999988


Q ss_pred             cCCccEEEEccccCCcccccccCChHHHHHHHHhhhHHHHHHHHHHhhhhhh-cCCeEEEEcCccccccCCCCccchHHH
Q 044010          123 FGRLDHLVNNAGISSVALFEDIVNITDFKQIMNINFWGSVYTTRFAVPHLRY-TKGKIVVLSSAASWLTAPRMSFYNASK  201 (248)
Q Consensus       123 ~g~id~vv~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~-~~g~iV~isS~~~~~~~~~~~~Y~~sK  201 (248)
                      ++++|++|||||........+ .+.+++++.+++|+.+++++++++++.+.+ ..|+||++||..+..+.+....|+++|
T Consensus        85 ~~~id~vi~~Ag~~~~~~~~~-~~~~~~~~~~~~n~~~~~~l~~~~l~~~~~~~~g~iv~isS~~~~~~~~~~~~Y~~sK  163 (274)
T PRK07775         85 LGEIEVLVSGAGDTYFGKLHE-ISTEQFESQVQIHLVGANRLATAVLPGMIERRRGDLIFVGSDVALRQRPHMGAYGAAK  163 (274)
T ss_pred             cCCCCEEEECCCcCCCccccc-CCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcCCceEEEECChHhcCCCCCcchHHHHH
Confidence            999999999999876554444 467899999999999999999999998764 358999999999888888888999999


Q ss_pred             HHHHHHHHHHHHHhCC-CeEEEEEecCccccCccc
Q 044010          202 AALVLFFETLRVELGS-DVGVTIVTPGFIESELTQ  235 (248)
Q Consensus       202 aal~~l~~~la~~~~~-~i~v~~v~pg~v~T~~~~  235 (248)
                      ++++++++.+++++.+ +|++++|+||+++|++..
T Consensus       164 ~a~~~l~~~~~~~~~~~gi~v~~v~pG~~~t~~~~  198 (274)
T PRK07775        164 AGLEAMVTNLQMELEGTGVRASIVHPGPTLTGMGW  198 (274)
T ss_pred             HHHHHHHHHHHHHhcccCeEEEEEeCCcccCcccc
Confidence            9999999999999976 599999999999998754

>PF00106 adh_short: short chain dehydrogenase alcohol dehydrogenase superfamily signature glucose/ribitol dehydrogenase family signature; InterPro: IPR002198 The short-chain dehydrogenases/reductases family (SDR) [] is a very large family of enzymes, most of which are known to be NAD- or NADP-dependent oxidoreductases

Probab=100.00  E-value=3e-31  Score=209.17  Aligned_cols=163  Identities=39%  Similarity=0.583  Sum_probs=149.9

Q ss_pred             CEEEEcCCCChHHHHHHHHHHHcCC-eEEEEeCC--cchHHHHHHHHHhhCCCcEEEEEccCCCHHHHHHHHHHHHhHcC
Q 044010           48 KVVIITGASSGIGEHLAYEYARRGA-CLALCARR--EKSLEEVADTAREIGSPDVITIRADVSKVDDCRSLVEETMNHFG  124 (248)
Q Consensus        48 k~~lVtGg~~gIG~aia~~l~~~G~-~V~l~~r~--~~~~~~~~~~l~~~~~~~v~~~~~D~~~~~~~~~~~~~~~~~~g  124 (248)
                      |+++||||++|||++++++|+++|. +|++++|+  .+..++..+++++.+ .++.++++|++++++++++++++.++++
T Consensus         1 k~~lItGa~~giG~~~a~~l~~~g~~~v~~~~r~~~~~~~~~l~~~l~~~~-~~~~~~~~D~~~~~~~~~~~~~~~~~~~   79 (167)
T PF00106_consen    1 KTVLITGASSGIGRALARALARRGARVVILTSRSEDSEGAQELIQELKAPG-AKITFIECDLSDPESIRALIEEVIKRFG   79 (167)
T ss_dssp             EEEEEETTTSHHHHHHHHHHHHTTTEEEEEEESSCHHHHHHHHHHHHHHTT-SEEEEEESETTSHHHHHHHHHHHHHHHS
T ss_pred             CEEEEECCCCHHHHHHHHHHHhcCceEEEEeeecccccccccccccccccc-cccccccccccccccccccccccccccc
Confidence            7899999999999999999999966 88999998  666777777888666 5899999999999999999999999999


Q ss_pred             CccEEEEccccCCcccccccCChHHHHHHHHhhhHHHHHHHHHHhhhhhhcCCeEEEEcCccccccCCCCccchHHHHHH
Q 044010          125 RLDHLVNNAGISSVALFEDIVNITDFKQIMNINFWGSVYTTRFAVPHLRYTKGKIVVLSSAASWLTAPRMSFYNASKAAL  204 (248)
Q Consensus       125 ~id~vv~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~g~iV~isS~~~~~~~~~~~~Y~~sKaal  204 (248)
                      ++|++|||+|.....+..+ .+.++|++.+++|+.+++.+.+.+.|   +.+|+||++||..+..+.+++++|++||+|+
T Consensus        80 ~ld~li~~ag~~~~~~~~~-~~~~~~~~~~~~n~~~~~~~~~~~~~---~~~g~iv~~sS~~~~~~~~~~~~Y~askaal  155 (167)
T PF00106_consen   80 PLDILINNAGIFSDGSLDD-LSEEELERVFRVNLFGPFLLAKALLP---QGGGKIVNISSIAGVRGSPGMSAYSASKAAL  155 (167)
T ss_dssp             SESEEEEECSCTTSBSGGG-SHHHHHHHHHHHHTHHHHHHHHHHHH---HTTEEEEEEEEGGGTSSSTTBHHHHHHHHHH
T ss_pred             ccccccccccccccccccc-ccchhhhhccccccceeeeeeehhee---ccccceEEecchhhccCCCCChhHHHHHHHH
Confidence            9999999999988666655 57799999999999999999999999   4689999999999999999999999999999


Q ss_pred             HHHHHHHHHHh
Q 044010          205 VLFFETLRVEL  215 (248)
Q Consensus       205 ~~l~~~la~~~  215 (248)
                      ++|++++++|+
T Consensus       156 ~~~~~~la~e~  166 (167)
T PF00106_consen  156 RGLTQSLAAEL  166 (167)
T ss_dssp             HHHHHHHHHHH
T ss_pred             HHHHHHHHHhc
Confidence            99999999986

As the first member of this family to be characterised was Drosophila alcohol dehydrogenase, this family used to be called [, , ] 'insect-type', or 'short-chain' alcohol dehydrogenases. Most member of this family are proteins of about 250 to 300 amino acid residues. Most dehydrogenases possess at least 2 domains [], the first binding the coenzyme, often NAD, and the second binding the substrate. This latter domain determines the substrate specificity and contains amino acids involved in catalysis. Little sequence similarity has been found in the coenzyme binding domain although there is a large degree of structural similarity, and it has therefore been suggested that the structure of dehydrogenases has arisen through gene fusion of a common ancestral coenzyme nucleotide sequence with various substrate specific domains [].; GO: 0016491 oxidoreductase activity, 0008152 metabolic process; PDB: 3QWI_D 3QWF_G 3IS3_A 3QWH_C 3ITD_A 3L77_A 1HDC_C 2HSD_C 3KVO_A 3KZV_A ....

>PRK05884 short chain dehydrogenase; Provisional

Probab=100.00  E-value=2.3e-31  Score=220.20  Aligned_cols=172  Identities=22%  Similarity=0.220  Sum_probs=145.2

Q ss_pred             EEEEcCCCChHHHHHHHHHHHcCCeEEEEeCCcchHHHHHHHHHhhCCCcEEEEEccCCCHHHHHHHHHHHHhHcCCccE
Q 044010           49 VVIITGASSGIGEHLAYEYARRGACLALCARREKSLEEVADTAREIGSPDVITIRADVSKVDDCRSLVEETMNHFGRLDH  128 (248)
Q Consensus        49 ~~lVtGg~~gIG~aia~~l~~~G~~V~l~~r~~~~~~~~~~~l~~~~~~~v~~~~~D~~~~~~~~~~~~~~~~~~g~id~  128 (248)
                      +++||||++|||++++++|+++|++|++.+|+.++.++..+++      .+.++.+|++|.++++++++++.+   ++|+
T Consensus         2 ~vlItGas~giG~~ia~~l~~~g~~v~~~~r~~~~~~~~~~~~------~~~~~~~D~~~~~~v~~~~~~~~~---~id~   72 (223)
T PRK05884          2 EVLVTGGDTDLGRTIAEGFRNDGHKVTLVGARRDDLEVAAKEL------DVDAIVCDNTDPASLEEARGLFPH---HLDT   72 (223)
T ss_pred             eEEEEeCCchHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHhc------cCcEEecCCCCHHHHHHHHHHHhh---cCcE
Confidence            5899999999999999999999999999999987666554443      246788999999999999887643   6999


Q ss_pred             EEEccccCCc----cc-ccccCChHHHHHHHHhhhHHHHHHHHHHhhhhhhcCCeEEEEcCccccccCCCCccchHHHHH
Q 044010          129 LVNNAGISSV----AL-FEDIVNITDFKQIMNINFWGSVYTTRFAVPHLRYTKGKIVVLSSAASWLTAPRMSFYNASKAA  203 (248)
Q Consensus       129 vv~~ag~~~~----~~-~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~g~iV~isS~~~~~~~~~~~~Y~~sKaa  203 (248)
                      +|||+|....    .. ...+ +.++|++.+++|+.++++++|.+.|.|+ ++|+||++||..    .+...+|++||+|
T Consensus        73 lv~~ag~~~~~~~~~~~~~~~-~~~~~~~~~~~N~~~~~~~~~~~~~~~~-~~g~Iv~isS~~----~~~~~~Y~asKaa  146 (223)
T PRK05884         73 IVNVPAPSWDAGDPRTYSLAD-TANAWRNALDATVLSAVLTVQSVGDHLR-SGGSIISVVPEN----PPAGSAEAAIKAA  146 (223)
T ss_pred             EEECCCccccCCCCcccchhc-CHHHHHHHHHHHHHHHHHHHHHHHHHhh-cCCeEEEEecCC----CCCccccHHHHHH
Confidence            9999985321    10 1111 3589999999999999999999999996 468999999976    3456899999999


Q ss_pred             HHHHHHHHHHHhCCC-eEEEEEecCccccCccc
Q 044010          204 LVLFFETLRVELGSD-VGVTIVTPGFIESELTQ  235 (248)
Q Consensus       204 l~~l~~~la~~~~~~-i~v~~v~pg~v~T~~~~  235 (248)
                      +++++++++.|+++. ||||+|+||+++|++.+
T Consensus       147 l~~~~~~la~e~~~~gI~v~~v~PG~v~t~~~~  179 (223)
T PRK05884        147 LSNWTAGQAAVFGTRGITINAVACGRSVQPGYD  179 (223)
T ss_pred             HHHHHHHHHHHhhhcCeEEEEEecCccCchhhh
Confidence            999999999999875 99999999999999754

>PRK12742 oxidoreductase; Provisional

Probab=100.00  E-value=5.5e-31  Score=219.04  Aligned_cols=181  Identities=24%  Similarity=0.402  Sum_probs=151.7

Q ss_pred             CCCCCEEEEcCCCChHHHHHHHHHHHcCCeEEEEeCC-cchHHHHHHHHHhhCCCcEEEEEccCCCHHHHHHHHHHHHhH
Q 044010           44 DVSGKVVIITGASSGIGEHLAYEYARRGACLALCARR-EKSLEEVADTAREIGSPDVITIRADVSKVDDCRSLVEETMNH  122 (248)
Q Consensus        44 ~~~~k~~lVtGg~~gIG~aia~~l~~~G~~V~l~~r~-~~~~~~~~~~l~~~~~~~v~~~~~D~~~~~~~~~~~~~~~~~  122 (248)
                      ++++|++|||||++|||++++++|+++|++|++++++ .++.++..+++      .+..+.+|++|.+++.++++    +
T Consensus         3 ~~~~k~vlItGasggIG~~~a~~l~~~G~~v~~~~~~~~~~~~~l~~~~------~~~~~~~D~~~~~~~~~~~~----~   72 (237)
T PRK12742          3 AFTGKKVLVLGGSRGIGAAIVRRFVTDGANVRFTYAGSKDAAERLAQET------GATAVQTDSADRDAVIDVVR----K   72 (237)
T ss_pred             CCCCCEEEEECCCChHHHHHHHHHHHCCCEEEEecCCCHHHHHHHHHHh------CCeEEecCCCCHHHHHHHHH----H
Confidence            5789999999999999999999999999999888764 33333322221      24578899999998877765    3


Q ss_pred             cCCccEEEEccccCCcccccccCChHHHHHHHHhhhHHHHHHHHHHhhhhhhcCCeEEEEcCcccc-ccCCCCccchHHH
Q 044010          123 FGRLDHLVNNAGISSVALFEDIVNITDFKQIMNINFWGSVYTTRFAVPHLRYTKGKIVVLSSAASW-LTAPRMSFYNASK  201 (248)
Q Consensus       123 ~g~id~vv~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~g~iV~isS~~~~-~~~~~~~~Y~~sK  201 (248)
                      ++++|++|||||........+ .+.++|++.+++|+.+++.+++.+.+.|+ ..|++|++||..+. .+.++...|+++|
T Consensus        73 ~~~id~li~~ag~~~~~~~~~-~~~~~~~~~~~~n~~~~~~l~~~~~~~~~-~~g~iv~isS~~~~~~~~~~~~~Y~~sK  150 (237)
T PRK12742         73 SGALDILVVNAGIAVFGDALE-LDADDIDRLFKINIHAPYHASVEAARQMP-EGGRIIIIGSVNGDRMPVAGMAAYAASK  150 (237)
T ss_pred             hCCCcEEEECCCCCCCCCccc-CCHHHHHHHHhHHHHHHHHHHHHHHHHHh-cCCeEEEEeccccccCCCCCCcchHHhH
Confidence            578999999999876554444 46799999999999999999999999986 45899999998874 5678889999999


Q ss_pred             HHHHHHHHHHHHHhCCC-eEEEEEecCccccCcccc
Q 044010          202 AALVLFFETLRVELGSD-VGVTIVTPGFIESELTQG  236 (248)
Q Consensus       202 aal~~l~~~la~~~~~~-i~v~~v~pg~v~T~~~~~  236 (248)
                      ++++++++.++.+++++ ||||+|+||+++|++...
T Consensus       151 aa~~~~~~~la~~~~~~gi~v~~v~Pg~~~t~~~~~  186 (237)
T PRK12742        151 SALQGMARGLARDFGPRGITINVVQPGPIDTDANPA  186 (237)
T ss_pred             HHHHHHHHHHHHHHhhhCeEEEEEecCcccCCcccc
Confidence            99999999999999874 999999999999998653

>PRK06198 short chain dehydrogenase; Provisional

Probab=100.00  E-value=7.9e-31  Score=221.12  Aligned_cols=189  Identities=30%  Similarity=0.484  Sum_probs=168.4

Q ss_pred             CCCCCEEEEcCCCChHHHHHHHHHHHcCCe-EEEEeCCcchHHHHHHHHHhhCCCcEEEEEccCCCHHHHHHHHHHHHhH
Q 044010           44 DVSGKVVIITGASSGIGEHLAYEYARRGAC-LALCARREKSLEEVADTAREIGSPDVITIRADVSKVDDCRSLVEETMNH  122 (248)
Q Consensus        44 ~~~~k~~lVtGg~~gIG~aia~~l~~~G~~-V~l~~r~~~~~~~~~~~l~~~~~~~v~~~~~D~~~~~~~~~~~~~~~~~  122 (248)
                      .+++|+++||||++|||.+++++|+++|++ |++++|+.++.++..+++.+.+ .++.++.+|+++.+++.++++.+.++
T Consensus         3 ~~~~k~vlItGa~g~iG~~la~~l~~~G~~~V~~~~r~~~~~~~~~~~l~~~~-~~~~~~~~D~~~~~~~~~~~~~~~~~   81 (260)
T PRK06198          3 RLDGKVALVTGGTQGLGAAIARAFAERGAAGLVICGRNAEKGEAQAAELEALG-AKAVFVQADLSDVEDCRRVVAAADEA   81 (260)
T ss_pred             CCCCcEEEEeCCCchHHHHHHHHHHHCCCCeEEEEcCCHHHHHHHHHHHHhcC-CeEEEEEccCCCHHHHHHHHHHHHHH
Confidence            578999999999999999999999999998 9999998877776666665443 47888999999999999999999999


Q ss_pred             cCCccEEEEccccCCcccccccCChHHHHHHHHhhhHHHHHHHHHHhhhhhhc--CCeEEEEcCccccccCCCCccchHH
Q 044010          123 FGRLDHLVNNAGISSVALFEDIVNITDFKQIMNINFWGSVYTTRFAVPHLRYT--KGKIVVLSSAASWLTAPRMSFYNAS  200 (248)
Q Consensus       123 ~g~id~vv~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~--~g~iV~isS~~~~~~~~~~~~Y~~s  200 (248)
                      ++++|++||++|........+ .+.++|+.++++|+.+++.+++.+.+.|.++  .|++|++||..+..+.++...|+++
T Consensus        82 ~g~id~li~~ag~~~~~~~~~-~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~g~iv~~ss~~~~~~~~~~~~Y~~s  160 (260)
T PRK06198         82 FGRLDALVNAAGLTDRGTILD-TSPELFDRHFAVNVRAPFFLMQEAIKLMRRRKAEGTIVNIGSMSAHGGQPFLAAYCAS  160 (260)
T ss_pred             hCCCCEEEECCCcCCCCChhh-CCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcCCCCEEEEECCcccccCCCCcchhHHH
Confidence            999999999999876554444 4679999999999999999999999998654  4899999999988888888999999


Q ss_pred             HHHHHHHHHHHHHHhCC-CeEEEEEecCccccCcc
Q 044010          201 KAALVLFFETLRVELGS-DVGVTIVTPGFIESELT  234 (248)
Q Consensus       201 Kaal~~l~~~la~~~~~-~i~v~~v~pg~v~T~~~  234 (248)
                      |+++++++++++.++.+ +|+|++|+||+++|++.
T Consensus       161 K~a~~~~~~~~a~e~~~~~i~v~~i~pg~~~t~~~  195 (260)
T PRK06198        161 KGALATLTRNAAYALLRNRIRVNGLNIGWMATEGE  195 (260)
T ss_pred             HHHHHHHHHHHHHHhcccCeEEEEEeeccccCcch
Confidence            99999999999999976 49999999999999874

>TIGR01831 fabG_rel 3-oxoacyl-(acyl-carrier-protein) reductase, putative

Probab=100.00  E-value=4.7e-31  Score=219.82  Aligned_cols=186  Identities=27%  Similarity=0.418  Sum_probs=161.9

Q ss_pred             EEEcCCCChHHHHHHHHHHHcCCeEEEEeCC-cchHHHHHHHHHhhCCCcEEEEEccCCCHHHHHHHHHHHHhHcCCccE
Q 044010           50 VIITGASSGIGEHLAYEYARRGACLALCARR-EKSLEEVADTAREIGSPDVITIRADVSKVDDCRSLVEETMNHFGRLDH  128 (248)
Q Consensus        50 ~lVtGg~~gIG~aia~~l~~~G~~V~l~~r~-~~~~~~~~~~l~~~~~~~v~~~~~D~~~~~~~~~~~~~~~~~~g~id~  128 (248)
                      ++||||++|||.++|++|+++|++|++++|. .++.+...+++++.+. ++.++.+|++|.++++++++++.+.++++|+
T Consensus         1 vlItGas~giG~~~a~~l~~~G~~v~~~~~~~~~~~~~~~~~l~~~~~-~~~~~~~Dl~~~~~~~~~~~~~~~~~~~i~~   79 (239)
T TIGR01831         1 VLVTGASRGIGRAIANRLAADGFEICVHYHSGRSDAESVVSAIQAQGG-NARLLQFDVADRVACRTLLEADIAEHGAYYG   79 (239)
T ss_pred             CEEeCCCchHHHHHHHHHHHCCCEEEEEeCCCHHHHHHHHHHHHHcCC-eEEEEEccCCCHHHHHHHHHHHHHHcCCCCE
Confidence            5899999999999999999999999998875 4555666666665543 7889999999999999999999999999999


Q ss_pred             EEEccccCCcccccccCChHHHHHHHHhhhHHHHHHHHHHh-hhhh-hcCCeEEEEcCccccccCCCCccchHHHHHHHH
Q 044010          129 LVNNAGISSVALFEDIVNITDFKQIMNINFWGSVYTTRFAV-PHLR-YTKGKIVVLSSAASWLTAPRMSFYNASKAALVL  206 (248)
Q Consensus       129 vv~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~-~~~~-~~~g~iV~isS~~~~~~~~~~~~Y~~sKaal~~  206 (248)
                      +|||+|.....++.+ .+.++|++.+++|+.+++.+.+.+. |.++ +..|++|++||..+..+.++...|+++|+++++
T Consensus        80 li~~ag~~~~~~~~~-~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~iv~vsS~~~~~~~~~~~~Y~~sK~a~~~  158 (239)
T TIGR01831        80 VVLNAGITRDAAFPA-LSEEDWDIVIHTNLDGFYNVIHPCTMPMIRARQGGRIITLASVSGVMGNRGQVNYSAAKAGLIG  158 (239)
T ss_pred             EEECCCCCCCCchhh-CCHHHHHHHHHHHhHHHHHHHHHHHHHHHhhcCCeEEEEEcchhhccCCCCCcchHHHHHHHHH
Confidence            999999876555444 4679999999999999999999875 5544 344899999999999999999999999999999


Q ss_pred             HHHHHHHHhCC-CeEEEEEecCccccCccccc
Q 044010          207 FFETLRVELGS-DVGVTIVTPGFIESELTQGK  237 (248)
Q Consensus       207 l~~~la~~~~~-~i~v~~v~pg~v~T~~~~~~  237 (248)
                      ++++++.++.+ +|+|++|+||+++|++..+.
T Consensus       159 ~~~~la~e~~~~gi~v~~v~Pg~v~t~~~~~~  190 (239)
T TIGR01831       159 ATKALAVELAKRKITVNCIAPGLIDTEMLAEV  190 (239)
T ss_pred             HHHHHHHHHhHhCeEEEEEEEccCccccchhh
Confidence            99999999976 59999999999999998754

This model represents a small, very well conserved family of proteins closely related to the FabG family, TIGR01830, and possibly equal in function. In all completed genomes with a member of this family, a FabG in TIGR01830 is also found.

>PRK07069 short chain dehydrogenase; Validated

Probab=99.98  E-value=7.1e-31  Score=220.03  Aligned_cols=186  Identities=27%  Similarity=0.438  Sum_probs=164.0

Q ss_pred             EEEcCCCChHHHHHHHHHHHcCCeEEEEeCC-cchHHHHHHHHHhhCC-CcEEEEEccCCCHHHHHHHHHHHHhHcCCcc
Q 044010           50 VIITGASSGIGEHLAYEYARRGACLALCARR-EKSLEEVADTAREIGS-PDVITIRADVSKVDDCRSLVEETMNHFGRLD  127 (248)
Q Consensus        50 ~lVtGg~~gIG~aia~~l~~~G~~V~l~~r~-~~~~~~~~~~l~~~~~-~~v~~~~~D~~~~~~~~~~~~~~~~~~g~id  127 (248)
                      ++||||++|||.+++++|+++|++|++++|+ .++.+...+++....+ ..+..+.+|++|.++++++++++.+.++++|
T Consensus         2 ilVtG~~~~iG~~~a~~l~~~G~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~id   81 (251)
T PRK07069          2 AFITGAAGGLGRAIARRMAEQGAKVFLTDINDAAGLDAFAAEINAAHGEGVAFAAVQDVTDEAQWQALLAQAADAMGGLS   81 (251)
T ss_pred             EEEECCCChHHHHHHHHHHHCCCEEEEEeCCcchHHHHHHHHHHhcCCCceEEEEEeecCCHHHHHHHHHHHHHHcCCcc
Confidence            7999999999999999999999999999998 6666666666655432 2355688999999999999999999999999


Q ss_pred             EEEEccccCCcccccccCChHHHHHHHHhhhHHHHHHHHHHhhhhhhc-CCeEEEEcCccccccCCCCccchHHHHHHHH
Q 044010          128 HLVNNAGISSVALFEDIVNITDFKQIMNINFWGSVYTTRFAVPHLRYT-KGKIVVLSSAASWLTAPRMSFYNASKAALVL  206 (248)
Q Consensus       128 ~vv~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~-~g~iV~isS~~~~~~~~~~~~Y~~sKaal~~  206 (248)
                      ++|||||.....+..+ .+.+++++.+++|+.+++.+++.++|.|.+. .++||++||..+..+.++...|+++|++++.
T Consensus        82 ~vi~~ag~~~~~~~~~-~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~~ii~~ss~~~~~~~~~~~~Y~~sK~a~~~  160 (251)
T PRK07069         82 VLVNNAGVGSFGAIEQ-IELDEWRRVMAINVESIFLGCKHALPYLRASQPASIVNISSVAAFKAEPDYTAYNASKAAVAS  160 (251)
T ss_pred             EEEECCCcCCCCChhh-CCHHHHHHHHHHhhHHHHHHHHHHHHHHhhcCCcEEEEecChhhccCCCCCchhHHHHHHHHH
Confidence            9999999876665555 4778999999999999999999999999754 4899999999999888999999999999999


Q ss_pred             HHHHHHHHhCC---CeEEEEEecCccccCcccc
Q 044010          207 FFETLRVELGS---DVGVTIVTPGFIESELTQG  236 (248)
Q Consensus       207 l~~~la~~~~~---~i~v~~v~pg~v~T~~~~~  236 (248)
                      ++++++.|+.+   +|+|++|+||+++|++...
T Consensus       161 ~~~~la~e~~~~~~~i~v~~v~pg~v~t~~~~~  193 (251)
T PRK07069        161 LTKSIALDCARRGLDVRCNSIHPTFIRTGIVDP  193 (251)
T ss_pred             HHHHHHHHhcccCCcEEEEEEeecccCCcchhH
Confidence            99999999854   3999999999999999764

>PRK08217 fabG 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional

Probab=99.98  E-value=1.5e-30  Score=218.06  Aligned_cols=193  Identities=31%  Similarity=0.466  Sum_probs=166.2

Q ss_pred             cCCCCCEEEEcCCCChHHHHHHHHHHHcCCeEEEEeCCcchHHHHHHHHHhhCCCcEEEEEccCCCHHHHHHHHHHHHhH
Q 044010           43 EDVSGKVVIITGASSGIGEHLAYEYARRGACLALCARREKSLEEVADTAREIGSPDVITIRADVSKVDDCRSLVEETMNH  122 (248)
Q Consensus        43 ~~~~~k~~lVtGg~~gIG~aia~~l~~~G~~V~l~~r~~~~~~~~~~~l~~~~~~~v~~~~~D~~~~~~~~~~~~~~~~~  122 (248)
                      |++++++++||||++|||.++++.|+++|++|++++|+.++.++..+++++.+ .++..+++|+++.++++++++.+.+.
T Consensus         1 ~~~~~~~~lItG~~g~iG~~~a~~l~~~G~~vi~~~r~~~~~~~~~~~~~~~~-~~~~~~~~D~~~~~~~~~~~~~~~~~   79 (253)
T PRK08217          1 MDLKDKVIVITGGAQGLGRAMAEYLAQKGAKLALIDLNQEKLEEAVAECGALG-TEVRGYAANVTDEEDVEATFAQIAED   79 (253)
T ss_pred             CCCCCCEEEEECCCchHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcC-CceEEEEcCCCCHHHHHHHHHHHHHH
Confidence            35789999999999999999999999999999999999888777777776554 37888999999999999999999888


Q ss_pred             cCCccEEEEccccCCcccc--------cccCChHHHHHHHHhhhHHHHHHHHHHhhhhhhc--CCeEEEEcCccccccCC
Q 044010          123 FGRLDHLVNNAGISSVALF--------EDIVNITDFKQIMNINFWGSVYTTRFAVPHLRYT--KGKIVVLSSAASWLTAP  192 (248)
Q Consensus       123 ~g~id~vv~~ag~~~~~~~--------~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~--~g~iV~isS~~~~~~~~  192 (248)
                      ++++|++|||+|.......        ....+.++++.++++|+.+++.+.+.+.+.|.+.  ++.+|++||.. ..+.+
T Consensus        80 ~~~id~vi~~ag~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~l~~~~~~~~iv~~ss~~-~~~~~  158 (253)
T PRK08217         80 FGQLNGLINNAGILRDGLLVKAKDGKVTSKMSLEQFQSVIDVNLTGVFLCGREAAAKMIESGSKGVIINISSIA-RAGNM  158 (253)
T ss_pred             cCCCCEEEECCCccCcCcccccccccccccCCHHHHHHHHhhhhHHHHHHHHHHHHHHHhcCCCeEEEEEcccc-ccCCC
Confidence            8999999999997543221        1234678999999999999999999999988643  37899998865 45667


Q ss_pred             CCccchHHHHHHHHHHHHHHHHhCC-CeEEEEEecCccccCccccc
Q 044010          193 RMSFYNASKAALVLFFETLRVELGS-DVGVTIVTPGFIESELTQGK  237 (248)
Q Consensus       193 ~~~~Y~~sKaal~~l~~~la~~~~~-~i~v~~v~pg~v~T~~~~~~  237 (248)
                      +...|++||+++++++++++.++.+ ++++++++||.++|++....
T Consensus       159 ~~~~Y~~sK~a~~~l~~~la~~~~~~~i~v~~v~pg~v~t~~~~~~  204 (253)
T PRK08217        159 GQTNYSASKAGVAAMTVTWAKELARYGIRVAAIAPGVIETEMTAAM  204 (253)
T ss_pred             CCchhHHHHHHHHHHHHHHHHHHHHcCcEEEEEeeCCCcCcccccc
Confidence            8899999999999999999999976 59999999999999987653

>PRK06077 fabG 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional

Probab=99.98  E-value=2e-30  Score=217.46  Aligned_cols=191  Identities=29%  Similarity=0.496  Sum_probs=165.6

Q ss_pred             cCCCCCEEEEcCCCChHHHHHHHHHHHcCCeEEEEeCC-cchHHHHHHHHHhhCCCcEEEEEccCCCHHHHHHHHHHHHh
Q 044010           43 EDVSGKVVIITGASSGIGEHLAYEYARRGACLALCARR-EKSLEEVADTAREIGSPDVITIRADVSKVDDCRSLVEETMN  121 (248)
Q Consensus        43 ~~~~~k~~lVtGg~~gIG~aia~~l~~~G~~V~l~~r~-~~~~~~~~~~l~~~~~~~v~~~~~D~~~~~~~~~~~~~~~~  121 (248)
                      +++++|++|||||+++||++++++|+++|++|++..|+ .+..++..+.+++.+ .++..+.+|+++.+++.++++++.+
T Consensus         2 ~~~~~~~vlitGasg~iG~~l~~~l~~~g~~v~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~D~~~~~~~~~~~~~~~~   80 (252)
T PRK06077          2 YSLKDKVVVVTGSGRGIGRAIAVRLAKEGSLVVVNAKKRAEEMNETLKMVKENG-GEGIGVLADVSTREGCETLAKATID   80 (252)
T ss_pred             CCCCCcEEEEeCCCChHHHHHHHHHHHCCCEEEEEeCCChHHHHHHHHHHHHcC-CeeEEEEeccCCHHHHHHHHHHHHH
Confidence            46789999999999999999999999999998877654 344444444455443 3677899999999999999999999


Q ss_pred             HcCCccEEEEccccCCcccccccCChHHHHHHHHhhhHHHHHHHHHHhhhhhhcCCeEEEEcCccccccCCCCccchHHH
Q 044010          122 HFGRLDHLVNNAGISSVALFEDIVNITDFKQIMNINFWGSVYTTRFAVPHLRYTKGKIVVLSSAASWLTAPRMSFYNASK  201 (248)
Q Consensus       122 ~~g~id~vv~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~g~iV~isS~~~~~~~~~~~~Y~~sK  201 (248)
                      .++++|++|||||.....+..+ .+.+++++.+++|+.+++.+++++.|.+++ .+++|++||.++..+.++...|++||
T Consensus        81 ~~~~~d~vi~~ag~~~~~~~~~-~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~-~~~iv~~sS~~~~~~~~~~~~Y~~sK  158 (252)
T PRK06077         81 RYGVADILVNNAGLGLFSPFLN-VDDKLIDKHISTDFKSVIYCSQELAKEMRE-GGAIVNIASVAGIRPAYGLSIYGAMK  158 (252)
T ss_pred             HcCCCCEEEECCCCCCCCChhh-CCHHHHHHHHhHhCHHHHHHHHHHHHHhhc-CcEEEEEcchhccCCCCCchHHHHHH
Confidence            9999999999999876655444 466889999999999999999999999864 58999999999999989999999999


Q ss_pred             HHHHHHHHHHHHHhCCCeEEEEEecCccccCcccc
Q 044010          202 AALVLFFETLRVELGSDVGVTIVTPGFIESELTQG  236 (248)
Q Consensus       202 aal~~l~~~la~~~~~~i~v~~v~pg~v~T~~~~~  236 (248)
                      +++++++++++++++++++++.+.||+++|++...
T Consensus       159 ~~~~~~~~~l~~~~~~~i~v~~v~Pg~i~t~~~~~  193 (252)
T PRK06077        159 AAVINLTKYLALELAPKIRVNAIAPGFVKTKLGES  193 (252)
T ss_pred             HHHHHHHHHHHHHHhcCCEEEEEeeCCccChHHHh
Confidence            99999999999999878999999999999998644

>PRK10538 malonic semialdehyde reductase; Provisional

Probab=99.98  E-value=2e-30  Score=217.61  Aligned_cols=181  Identities=27%  Similarity=0.427  Sum_probs=158.2

Q ss_pred             CEEEEcCCCChHHHHHHHHHHHcCCeEEEEeCCcchHHHHHHHHHhhCCCcEEEEEccCCCHHHHHHHHHHHHhHcCCcc
Q 044010           48 KVVIITGASSGIGEHLAYEYARRGACLALCARREKSLEEVADTAREIGSPDVITIRADVSKVDDCRSLVEETMNHFGRLD  127 (248)
Q Consensus        48 k~~lVtGg~~gIG~aia~~l~~~G~~V~l~~r~~~~~~~~~~~l~~~~~~~v~~~~~D~~~~~~~~~~~~~~~~~~g~id  127 (248)
                      ++++||||++|||.+++++|+++|++|++++|+.++.+...+.+   + .++.++.+|++|.++++++++++.+.++++|
T Consensus         1 ~~vlItGasg~iG~~la~~l~~~G~~V~~~~r~~~~~~~~~~~~---~-~~~~~~~~Dl~~~~~i~~~~~~~~~~~~~id   76 (248)
T PRK10538          1 MIVLVTGATAGFGECITRRFIQQGHKVIATGRRQERLQELKDEL---G-DNLYIAQLDVRNRAAIEEMLASLPAEWRNID   76 (248)
T ss_pred             CEEEEECCCchHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHh---c-cceEEEEecCCCHHHHHHHHHHHHHHcCCCC
Confidence            36899999999999999999999999999999987665544433   2 3688899999999999999999999999999


Q ss_pred             EEEEccccCCc-ccccccCChHHHHHHHHhhhHHHHHHHHHHhhhhhhcC-CeEEEEcCccccccCCCCccchHHHHHHH
Q 044010          128 HLVNNAGISSV-ALFEDIVNITDFKQIMNINFWGSVYTTRFAVPHLRYTK-GKIVVLSSAASWLTAPRMSFYNASKAALV  205 (248)
Q Consensus       128 ~vv~~ag~~~~-~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~-g~iV~isS~~~~~~~~~~~~Y~~sKaal~  205 (248)
                      ++|||||.... .+..+ .+.+++++.+++|+.+++.+++.+.+.|.+.+ +++|++||..+..+.++...|+++|++++
T Consensus        77 ~vi~~ag~~~~~~~~~~-~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~iv~isS~~~~~~~~~~~~Y~~sK~~~~  155 (248)
T PRK10538         77 VLVNNAGLALGLEPAHK-ASVEDWETMIDTNNKGLVYMTRAVLPGMVERNHGHIINIGSTAGSWPYAGGNVYGATKAFVR  155 (248)
T ss_pred             EEEECCCccCCCCCccc-CCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcCCcEEEEECCcccCCCCCCCchhHHHHHHHH
Confidence            99999997542 23333 57799999999999999999999999987554 89999999998888888899999999999


Q ss_pred             HHHHHHHHHhCCC-eEEEEEecCccccCc
Q 044010          206 LFFETLRVELGSD-VGVTIVTPGFIESEL  233 (248)
Q Consensus       206 ~l~~~la~~~~~~-i~v~~v~pg~v~T~~  233 (248)
                      ++++.++.++++. |++++|.||.+.|++
T Consensus       156 ~~~~~l~~~~~~~~i~v~~v~pg~i~~~~  184 (248)
T PRK10538        156 QFSLNLRTDLHGTAVRVTDIEPGLVGGTE  184 (248)
T ss_pred             HHHHHHHHHhcCCCcEEEEEeCCeecccc
Confidence            9999999999874 999999999998544

>TIGR01829 AcAcCoA_reduct acetoacetyl-CoA reductase

Probab=99.98  E-value=2.3e-30  Score=215.68  Aligned_cols=187  Identities=25%  Similarity=0.424  Sum_probs=163.8

Q ss_pred             CEEEEcCCCChHHHHHHHHHHHcCCeEEEEeC-CcchHHHHHHHHHhhCCCcEEEEEccCCCHHHHHHHHHHHHhHcCCc
Q 044010           48 KVVIITGASSGIGEHLAYEYARRGACLALCAR-REKSLEEVADTAREIGSPDVITIRADVSKVDDCRSLVEETMNHFGRL  126 (248)
Q Consensus        48 k~~lVtGg~~gIG~aia~~l~~~G~~V~l~~r-~~~~~~~~~~~l~~~~~~~v~~~~~D~~~~~~~~~~~~~~~~~~g~i  126 (248)
                      |++|||||++|||.+++++|+++|++|+++.| +.++.++..+++...+ .++.++.+|++|+++++++++++.+.++++
T Consensus         1 k~~lItG~sg~iG~~la~~l~~~G~~v~~~~r~~~~~~~~~~~~~~~~~-~~~~~~~~D~~~~~~~~~~~~~~~~~~~~i   79 (242)
T TIGR01829         1 RIALVTGGMGGIGTAICQRLAKDGYRVAANCGPNEERAEAWLQEQGALG-FDFRVVEGDVSSFESCKAAVAKVEAELGPI   79 (242)
T ss_pred             CEEEEECCCChHHHHHHHHHHHCCCEEEEEeCCCHHHHHHHHHHHHhhC-CceEEEEecCCCHHHHHHHHHHHHHHcCCC
Confidence            78999999999999999999999999999888 5555555444444333 378899999999999999999999999999


Q ss_pred             cEEEEccccCCcccccccCChHHHHHHHHhhhHHHHHHHHHHhhhhhhcC-CeEEEEcCccccccCCCCccchHHHHHHH
Q 044010          127 DHLVNNAGISSVALFEDIVNITDFKQIMNINFWGSVYTTRFAVPHLRYTK-GKIVVLSSAASWLTAPRMSFYNASKAALV  205 (248)
Q Consensus       127 d~vv~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~-g~iV~isS~~~~~~~~~~~~Y~~sKaal~  205 (248)
                      |++|||+|...+....+ .+.+++++.+++|+.+++.+++++.+.|++.+ ++||++||..+..+.+++..|+++|++++
T Consensus        80 d~vi~~ag~~~~~~~~~-~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~~iv~iss~~~~~~~~~~~~y~~sk~a~~  158 (242)
T TIGR01829        80 DVLVNNAGITRDATFKK-MTYEQWSAVIDTNLNSVFNVTQPVIDGMRERGWGRIINISSVNGQKGQFGQTNYSAAKAGMI  158 (242)
T ss_pred             cEEEECCCCCCCCChhh-CCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcCCcEEEEEcchhhcCCCCCcchhHHHHHHHH
Confidence            99999999876554444 47789999999999999999999999987544 89999999998888888999999999999


Q ss_pred             HHHHHHHHHhCC-CeEEEEEecCccccCcccc
Q 044010          206 LFFETLRVELGS-DVGVTIVTPGFIESELTQG  236 (248)
Q Consensus       206 ~l~~~la~~~~~-~i~v~~v~pg~v~T~~~~~  236 (248)
                      .+++++++++.+ +++++++.||+++|++...
T Consensus       159 ~~~~~la~~~~~~~i~v~~i~pg~~~t~~~~~  190 (242)
T TIGR01829       159 GFTKALAQEGATKGVTVNTISPGYIATDMVMA  190 (242)
T ss_pred             HHHHHHHHHhhhhCeEEEEEeeCCCcCccccc
Confidence            999999999976 5999999999999998764

(R)-3-hydroxyacyl-CoA + NADP+ = 3-oxoacyl-CoA + NADPH. Members of this family may act in the biosynthesis of poly-beta-hydroxybutyrate (e.g. Rhizobium meliloti) and related poly-beta-hydroxyalkanoates. Note that the member of this family from Azospirillum brasilense, designated NodG, appears to lack acetoacetyl-CoA reductase activity and to act instead in the production of nodulation factor. This family is downgraded to subfamily for this NodG. Other proteins designated NodG, as from Rhizobium, belong to related but distinct protein families.

>PRK12824 acetoacetyl-CoA reductase; Provisional

Probab=99.98  E-value=2.2e-30  Score=216.21  Aligned_cols=187  Identities=23%  Similarity=0.343  Sum_probs=161.8

Q ss_pred             CEEEEcCCCChHHHHHHHHHHHcCCeEEEEeCCcch-HHHHHHHHHhhCCCcEEEEEccCCCHHHHHHHHHHHHhHcCCc
Q 044010           48 KVVIITGASSGIGEHLAYEYARRGACLALCARREKS-LEEVADTAREIGSPDVITIRADVSKVDDCRSLVEETMNHFGRL  126 (248)
Q Consensus        48 k~~lVtGg~~gIG~aia~~l~~~G~~V~l~~r~~~~-~~~~~~~l~~~~~~~v~~~~~D~~~~~~~~~~~~~~~~~~g~i  126 (248)
                      |+++||||+++||+++|++|+++|++|++++|+..+ .++..+..... ..++.++.+|+++.++++++++++.++++++
T Consensus         3 k~vlItG~s~~iG~~la~~l~~~g~~vi~~~r~~~~~~~~~~~~~~~~-~~~~~~~~~D~~~~~~v~~~~~~~~~~~~~i   81 (245)
T PRK12824          3 KIALVTGAKRGIGSAIARELLNDGYRVIATYFSGNDCAKDWFEEYGFT-EDQVRLKELDVTDTEECAEALAEIEEEEGPV   81 (245)
T ss_pred             CEEEEeCCCchHHHHHHHHHHHcCCEEEEEeCCcHHHHHHHHHHhhcc-CCeEEEEEcCCCCHHHHHHHHHHHHHHcCCC
Confidence            689999999999999999999999999999998541 22222222222 2368899999999999999999999999999


Q ss_pred             cEEEEccccCCcccccccCChHHHHHHHHhhhHHHHHHHHHHhhhhhhc-CCeEEEEcCccccccCCCCccchHHHHHHH
Q 044010          127 DHLVNNAGISSVALFEDIVNITDFKQIMNINFWGSVYTTRFAVPHLRYT-KGKIVVLSSAASWLTAPRMSFYNASKAALV  205 (248)
Q Consensus       127 d~vv~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~-~g~iV~isS~~~~~~~~~~~~Y~~sKaal~  205 (248)
                      |++|||+|.....+..+ .+.++|++.+++|+.+++.+.+.+.+.+++. .+++|++||..+..+.++.+.|++||++++
T Consensus        82 d~vi~~ag~~~~~~~~~-~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~iv~iss~~~~~~~~~~~~Y~~sK~a~~  160 (245)
T PRK12824         82 DILVNNAGITRDSVFKR-MSHQEWNDVINTNLNSVFNVTQPLFAAMCEQGYGRIINISSVNGLKGQFGQTNYSAAKAGMI  160 (245)
T ss_pred             CEEEECCCCCCCCcccc-CCHHHHHHHHHHHhHHHHHHHHHHHHHHHHhCCeEEEEECChhhccCCCCChHHHHHHHHHH
Confidence            99999999876555554 4679999999999999999999999998754 489999999999888889999999999999


Q ss_pred             HHHHHHHHHhCC-CeEEEEEecCccccCcccc
Q 044010          206 LFFETLRVELGS-DVGVTIVTPGFIESELTQG  236 (248)
Q Consensus       206 ~l~~~la~~~~~-~i~v~~v~pg~v~T~~~~~  236 (248)
                      ++++.++.++++ ++++++++||.++|++.+.
T Consensus       161 ~~~~~l~~~~~~~~i~v~~v~pg~~~t~~~~~  192 (245)
T PRK12824        161 GFTKALASEGARYGITVNCIAPGYIATPMVEQ  192 (245)
T ss_pred             HHHHHHHHHHHHhCeEEEEEEEcccCCcchhh
Confidence            999999999977 4999999999999998764

>PRK06550 fabG 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional

Probab=99.98  E-value=1e-30  Score=217.33  Aligned_cols=179  Identities=27%  Similarity=0.392  Sum_probs=152.6

Q ss_pred             cCCCCCEEEEcCCCChHHHHHHHHHHHcCCeEEEEeCCcchHHHHHHHHHhhCCCcEEEEEccCCCHHHHHHHHHHHHhH
Q 044010           43 EDVSGKVVIITGASSGIGEHLAYEYARRGACLALCARREKSLEEVADTAREIGSPDVITIRADVSKVDDCRSLVEETMNH  122 (248)
Q Consensus        43 ~~~~~k~~lVtGg~~gIG~aia~~l~~~G~~V~l~~r~~~~~~~~~~~l~~~~~~~v~~~~~D~~~~~~~~~~~~~~~~~  122 (248)
                      +++++|+++||||++|||.+++++|+++|++|++++|+....         . ..++.++.+|++++      ++++.+.
T Consensus         1 ~~l~~k~~lVtGas~~iG~~ia~~l~~~G~~v~~~~r~~~~~---------~-~~~~~~~~~D~~~~------~~~~~~~   64 (235)
T PRK06550          1 QEFMTKTVLITGAASGIGLAQARAFLAQGAQVYGVDKQDKPD---------L-SGNFHFLQLDLSDD------LEPLFDW   64 (235)
T ss_pred             CCCCCCEEEEcCCCchHHHHHHHHHHHCCCEEEEEeCCcccc---------c-CCcEEEEECChHHH------HHHHHHh
Confidence            468899999999999999999999999999999999975431         0 12678899999987      4445556


Q ss_pred             cCCccEEEEccccCCc-ccccccCChHHHHHHHHhhhHHHHHHHHHHhhhhhhc-CCeEEEEcCccccccCCCCccchHH
Q 044010          123 FGRLDHLVNNAGISSV-ALFEDIVNITDFKQIMNINFWGSVYTTRFAVPHLRYT-KGKIVVLSSAASWLTAPRMSFYNAS  200 (248)
Q Consensus       123 ~g~id~vv~~ag~~~~-~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~-~g~iV~isS~~~~~~~~~~~~Y~~s  200 (248)
                      ++++|++|||||.... .+..+ .+.+++++.+++|+.+++.+.+++.|.+.++ .|+||++||..+..+.++...|+++
T Consensus        65 ~~~id~lv~~ag~~~~~~~~~~-~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~iv~~sS~~~~~~~~~~~~Y~~s  143 (235)
T PRK06550         65 VPSVDILCNTAGILDDYKPLLD-TSLEEWQHIFDTNLTSTFLLTRAYLPQMLERKSGIIINMCSIASFVAGGGGAAYTAS  143 (235)
T ss_pred             hCCCCEEEECCCCCCCCCCccc-CCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcCCcEEEEEcChhhccCCCCCcccHHH
Confidence            6899999999997643 33333 5678999999999999999999999998644 4899999999998888889999999


Q ss_pred             HHHHHHHHHHHHHHhCC-CeEEEEEecCccccCcccccc
Q 044010          201 KAALVLFFETLRVELGS-DVGVTIVTPGFIESELTQGKF  238 (248)
Q Consensus       201 Kaal~~l~~~la~~~~~-~i~v~~v~pg~v~T~~~~~~~  238 (248)
                      |+++++++++++.++++ +|+||+|+||+++|++....+
T Consensus       144 K~a~~~~~~~la~~~~~~gi~v~~v~pg~v~t~~~~~~~  182 (235)
T PRK06550        144 KHALAGFTKQLALDYAKDGIQVFGIAPGAVKTPMTAADF  182 (235)
T ss_pred             HHHHHHHHHHHHHHhhhcCeEEEEEeeCCccCccccccc
Confidence            99999999999999977 599999999999999875443

>PRK06482 short chain dehydrogenase; Provisional

Probab=99.98  E-value=2.3e-30  Score=220.45  Aligned_cols=185  Identities=30%  Similarity=0.485  Sum_probs=162.4

Q ss_pred             CCEEEEcCCCChHHHHHHHHHHHcCCeEEEEeCCcchHHHHHHHHHhhCCCcEEEEEccCCCHHHHHHHHHHHHhHcCCc
Q 044010           47 GKVVIITGASSGIGEHLAYEYARRGACLALCARREKSLEEVADTAREIGSPDVITIRADVSKVDDCRSLVEETMNHFGRL  126 (248)
Q Consensus        47 ~k~~lVtGg~~gIG~aia~~l~~~G~~V~l~~r~~~~~~~~~~~l~~~~~~~v~~~~~D~~~~~~~~~~~~~~~~~~g~i  126 (248)
                      .|++|||||+||||++++++|+++|++|++++|+.+..++..+..    +.++.++.+|++|.++++++++++.+.++++
T Consensus         2 ~k~vlVtGasg~IG~~la~~L~~~g~~v~~~~r~~~~~~~~~~~~----~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~i   77 (276)
T PRK06482          2 SKTWFITGASSGFGRGMTERLLARGDRVAATVRRPDALDDLKARY----GDRLWVLQLDVTDSAAVRAVVDRAFAALGRI   77 (276)
T ss_pred             CCEEEEecCCCHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHhc----cCceEEEEccCCCHHHHHHHHHHHHHHcCCC
Confidence            478999999999999999999999999999999876554443322    2368899999999999999999999989999


Q ss_pred             cEEEEccccCCcccccccCChHHHHHHHHhhhHHHHHHHHHHhhhhhhc-CCeEEEEcCccccccCCCCccchHHHHHHH
Q 044010          127 DHLVNNAGISSVALFEDIVNITDFKQIMNINFWGSVYTTRFAVPHLRYT-KGKIVVLSSAASWLTAPRMSFYNASKAALV  205 (248)
Q Consensus       127 d~vv~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~-~g~iV~isS~~~~~~~~~~~~Y~~sKaal~  205 (248)
                      |++|||||.....+..+ .+.+++++.+++|+.+++.+++.++|.|++. .++||++||..+..+.++...|++||++++
T Consensus        78 d~vi~~ag~~~~~~~~~-~~~~~~~~~~~~n~~g~~~l~~~~~~~~~~~~~~~iv~~sS~~~~~~~~~~~~Y~~sK~a~~  156 (276)
T PRK06482         78 DVVVSNAGYGLFGAAEE-LSDAQIRRQIDTNLIGSIQVIRAALPHLRRQGGGRIVQVSSEGGQIAYPGFSLYHATKWGIE  156 (276)
T ss_pred             CEEEECCCCCCCccccc-CCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcCCCEEEEEcCcccccCCCCCchhHHHHHHHH
Confidence            99999999876655544 4678999999999999999999999998754 489999999988888888999999999999


Q ss_pred             HHHHHHHHHhCC-CeEEEEEecCccccCcccc
Q 044010          206 LFFETLRVELGS-DVGVTIVTPGFIESELTQG  236 (248)
Q Consensus       206 ~l~~~la~~~~~-~i~v~~v~pg~v~T~~~~~  236 (248)
                      +++++++.++++ +++++.+.||.+.|++...
T Consensus       157 ~~~~~l~~~~~~~gi~v~~v~pg~~~t~~~~~  188 (276)
T PRK06482        157 GFVEAVAQEVAPFGIEFTIVEPGPARTNFGAG  188 (276)
T ss_pred             HHHHHHHHHhhccCcEEEEEeCCccccCCccc
Confidence            999999999976 5999999999999988654

>PRK09135 pteridine reductase; Provisional

Probab=99.98  E-value=3.2e-30  Score=215.52  Aligned_cols=192  Identities=27%  Similarity=0.359  Sum_probs=166.8

Q ss_pred             CCCCCEEEEcCCCChHHHHHHHHHHHcCCeEEEEeCCc-chHHHHHHHHHhhCCCcEEEEEccCCCHHHHHHHHHHHHhH
Q 044010           44 DVSGKVVIITGASSGIGEHLAYEYARRGACLALCARRE-KSLEEVADTAREIGSPDVITIRADVSKVDDCRSLVEETMNH  122 (248)
Q Consensus        44 ~~~~k~~lVtGg~~gIG~aia~~l~~~G~~V~l~~r~~-~~~~~~~~~l~~~~~~~v~~~~~D~~~~~~~~~~~~~~~~~  122 (248)
                      .+++|++|||||+++||++++++|+++|++|++++|+. ++.+...+.+.+..+..+.++.+|++|.+++.++++++.+.
T Consensus         3 ~~~~~~vlItGa~g~iG~~l~~~l~~~g~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~   82 (249)
T PRK09135          3 TDSAKVALITGGARRIGAAIARTLHAAGYRVAIHYHRSAAEADALAAELNALRPGSAAALQADLLDPDALPELVAACVAA   82 (249)
T ss_pred             CCCCCEEEEeCCCchHHHHHHHHHHHCCCEEEEEcCCCHHHHHHHHHHHHhhcCCceEEEEcCCCCHHHHHHHHHHHHHH
Confidence            45779999999999999999999999999999999864 44555555565544446888999999999999999999999


Q ss_pred             cCCccEEEEccccCCcccccccCChHHHHHHHHhhhHHHHHHHHHHhhhhhhcCCeEEEEcCccccccCCCCccchHHHH
Q 044010          123 FGRLDHLVNNAGISSVALFEDIVNITDFKQIMNINFWGSVYTTRFAVPHLRYTKGKIVVLSSAASWLTAPRMSFYNASKA  202 (248)
Q Consensus       123 ~g~id~vv~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~g~iV~isS~~~~~~~~~~~~Y~~sKa  202 (248)
                      ++++|++||+||...+.+..+ .+.+++++.+++|+.+++.+.+++.+.+.+.++.+++++|..+..+.++..+|++||+
T Consensus        83 ~~~~d~vi~~ag~~~~~~~~~-~~~~~~~~~~~~n~~g~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~sK~  161 (249)
T PRK09135         83 FGRLDALVNNASSFYPTPLGS-ITEAQWDDLFASNLKAPFFLSQAAAPQLRKQRGAIVNITDIHAERPLKGYPVYCAAKA  161 (249)
T ss_pred             cCCCCEEEECCCCCCCCChhh-CCHHHHHHHHHHhchhHHHHHHHHHHHHhhCCeEEEEEeChhhcCCCCCchhHHHHHH
Confidence            999999999999866554444 4668899999999999999999999998767789999888777777788899999999


Q ss_pred             HHHHHHHHHHHHhCCCeEEEEEecCccccCcccc
Q 044010          203 ALVLFFETLRVELGSDVGVTIVTPGFIESELTQG  236 (248)
Q Consensus       203 al~~l~~~la~~~~~~i~v~~v~pg~v~T~~~~~  236 (248)
                      +++.++++++.+++++++++++.||++.|++...
T Consensus       162 ~~~~~~~~l~~~~~~~i~~~~v~pg~~~~~~~~~  195 (249)
T PRK09135        162 ALEMLTRSLALELAPEVRVNAVAPGAILWPEDGN  195 (249)
T ss_pred             HHHHHHHHHHHHHCCCCeEEEEEeccccCccccc
Confidence            9999999999999778999999999999998654

>PRK05565 fabG 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional

Probab=99.98  E-value=2.3e-30  Score=216.11  Aligned_cols=194  Identities=36%  Similarity=0.548  Sum_probs=171.4

Q ss_pred             cCCCCCEEEEcCCCChHHHHHHHHHHHcCCeEEEE-eCCcchHHHHHHHHHhhCCCcEEEEEccCCCHHHHHHHHHHHHh
Q 044010           43 EDVSGKVVIITGASSGIGEHLAYEYARRGACLALC-ARREKSLEEVADTAREIGSPDVITIRADVSKVDDCRSLVEETMN  121 (248)
Q Consensus        43 ~~~~~k~~lVtGg~~gIG~aia~~l~~~G~~V~l~-~r~~~~~~~~~~~l~~~~~~~v~~~~~D~~~~~~~~~~~~~~~~  121 (248)
                      +++.+|++|||||+++||.+++++|+++|++|+++ +|+.++.++..+.+...+ .++.++.+|++|.+++.++++++.+
T Consensus         1 ~~~~~~~ilI~Gasg~iG~~la~~l~~~g~~v~~~~~r~~~~~~~~~~~~~~~~-~~~~~~~~D~~~~~~~~~~~~~~~~   79 (247)
T PRK05565          1 MKLMGKVAIVTGASGGIGRAIAELLAKEGAKVVIAYDINEEAAQELLEEIKEEG-GDAIAVKADVSSEEDVENLVEQIVE   79 (247)
T ss_pred             CCCCCCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEcCCCHHHHHHHHHHHHhcC-CeEEEEECCCCCHHHHHHHHHHHHH
Confidence            46788999999999999999999999999999998 998877777766666533 4688999999999999999999999


Q ss_pred             HcCCccEEEEccccCCcccccccCChHHHHHHHHhhhHHHHHHHHHHhhhhhhc-CCeEEEEcCccccccCCCCccchHH
Q 044010          122 HFGRLDHLVNNAGISSVALFEDIVNITDFKQIMNINFWGSVYTTRFAVPHLRYT-KGKIVVLSSAASWLTAPRMSFYNAS  200 (248)
Q Consensus       122 ~~g~id~vv~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~-~g~iV~isS~~~~~~~~~~~~Y~~s  200 (248)
                      +++++|++||++|.....+..+ .+.+++++.+++|+.+++.+.+.+.+.+.+. .+++|++||..+..+.+...+|+++
T Consensus        80 ~~~~id~vi~~ag~~~~~~~~~-~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~v~~sS~~~~~~~~~~~~y~~s  158 (247)
T PRK05565         80 KFGKIDILVNNAGISNFGLVTD-MTDEEWDRVIDVNLTGVMLLTRYALPYMIKRKSGVIVNISSIWGLIGASCEVLYSAS  158 (247)
T ss_pred             HhCCCCEEEECCCcCCCCChhh-CCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcCCcEEEEECCHhhccCCCCccHHHHH
Confidence            9999999999999875544444 4679999999999999999999999998655 4789999999988888889999999


Q ss_pred             HHHHHHHHHHHHHHhCC-CeEEEEEecCccccCcccccc
Q 044010          201 KAALVLFFETLRVELGS-DVGVTIVTPGFIESELTQGKF  238 (248)
Q Consensus       201 Kaal~~l~~~la~~~~~-~i~v~~v~pg~v~T~~~~~~~  238 (248)
                      |++++.++++++.++.+ ++++++|+||+++|++.+...
T Consensus       159 K~a~~~~~~~~~~~~~~~gi~~~~v~pg~v~t~~~~~~~  197 (247)
T PRK05565        159 KGAVNAFTKALAKELAPSGIRVNAVAPGAIDTEMWSSFS  197 (247)
T ss_pred             HHHHHHHHHHHHHHHHHcCeEEEEEEECCccCccccccC
Confidence            99999999999999965 599999999999999876543

>PRK07326 short chain dehydrogenase; Provisional

Probab=99.97  E-value=6.1e-30  Score=212.74  Aligned_cols=192  Identities=32%  Similarity=0.460  Sum_probs=170.5

Q ss_pred             cCCCCCEEEEcCCCChHHHHHHHHHHHcCCeEEEEeCCcchHHHHHHHHHhhCCCcEEEEEccCCCHHHHHHHHHHHHhH
Q 044010           43 EDVSGKVVIITGASSGIGEHLAYEYARRGACLALCARREKSLEEVADTAREIGSPDVITIRADVSKVDDCRSLVEETMNH  122 (248)
Q Consensus        43 ~~~~~k~~lVtGg~~gIG~aia~~l~~~G~~V~l~~r~~~~~~~~~~~l~~~~~~~v~~~~~D~~~~~~~~~~~~~~~~~  122 (248)
                      +.+++|+++||||+|+||.+++++|+++|++|++++|++++.++..+.+...  .++.++.+|+++.+++.++++++.+.
T Consensus         2 ~~~~~~~ilItGatg~iG~~la~~l~~~g~~V~~~~r~~~~~~~~~~~l~~~--~~~~~~~~D~~~~~~~~~~~~~~~~~   79 (237)
T PRK07326          2 MSLKGKVALITGGSKGIGFAIAEALLAEGYKVAITARDQKELEEAAAELNNK--GNVLGLAADVRDEADVQRAVDAIVAA   79 (237)
T ss_pred             CCCCCCEEEEECCCCcHHHHHHHHHHHCCCEEEEeeCCHHHHHHHHHHHhcc--CcEEEEEccCCCHHHHHHHHHHHHHH
Confidence            3567899999999999999999999999999999999988777777766543  36889999999999999999999999


Q ss_pred             cCCccEEEEccccCCcccccccCChHHHHHHHHhhhHHHHHHHHHHhhhhhhcCCeEEEEcCccccccCCCCccchHHHH
Q 044010          123 FGRLDHLVNNAGISSVALFEDIVNITDFKQIMNINFWGSVYTTRFAVPHLRYTKGKIVVLSSAASWLTAPRMSFYNASKA  202 (248)
Q Consensus       123 ~g~id~vv~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~g~iV~isS~~~~~~~~~~~~Y~~sKa  202 (248)
                      ++++|++||++|.....++.+ .+.+++++.+++|+.+++.+++++.+.+++..+++|++||..+..+.++...|+++|+
T Consensus        80 ~~~~d~vi~~ag~~~~~~~~~-~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~iv~~ss~~~~~~~~~~~~y~~sk~  158 (237)
T PRK07326         80 FGGLDVLIANAGVGHFAPVEE-LTPEEWRLVIDTNLTGAFYTIKAAVPALKRGGGYIINISSLAGTNFFAGGAAYNASKF  158 (237)
T ss_pred             cCCCCEEEECCCCCCCCchhh-CCHHHHHHHHhhccHHHHHHHHHHHHHHHHCCeEEEEECChhhccCCCCCchHHHHHH
Confidence            999999999999876554444 4778999999999999999999999988655689999999988888888889999999


Q ss_pred             HHHHHHHHHHHHhCC-CeEEEEEecCccccCccccc
Q 044010          203 ALVLFFETLRVELGS-DVGVTIVTPGFIESELTQGK  237 (248)
Q Consensus       203 al~~l~~~la~~~~~-~i~v~~v~pg~v~T~~~~~~  237 (248)
                      +++++++.++.++.+ ++++++|.||++.|++....
T Consensus       159 a~~~~~~~~~~~~~~~gi~v~~v~pg~~~t~~~~~~  194 (237)
T PRK07326        159 GLVGFSEAAMLDLRQYGIKVSTIMPGSVATHFNGHT  194 (237)
T ss_pred             HHHHHHHHHHHHhcccCcEEEEEeeccccCcccccc
Confidence            999999999999976 59999999999999886543

>PRK12827 short chain dehydrogenase; Provisional

Probab=99.97  E-value=5.8e-30  Score=213.97  Aligned_cols=193  Identities=30%  Similarity=0.458  Sum_probs=165.4

Q ss_pred             CCCCCEEEEcCCCChHHHHHHHHHHHcCCeEEEEeCC----cchHHHHHHHHHhhCCCcEEEEEccCCCHHHHHHHHHHH
Q 044010           44 DVSGKVVIITGASSGIGEHLAYEYARRGACLALCARR----EKSLEEVADTAREIGSPDVITIRADVSKVDDCRSLVEET  119 (248)
Q Consensus        44 ~~~~k~~lVtGg~~gIG~aia~~l~~~G~~V~l~~r~----~~~~~~~~~~l~~~~~~~v~~~~~D~~~~~~~~~~~~~~  119 (248)
                      ++++|+++||||++|||+++|++|+++|++|++++|.    .+..++..+++...+ .++.++.+|++|.++++++++++
T Consensus         3 ~~~~~~ilItGasg~iG~~la~~l~~~g~~v~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~Dl~~~~~~~~~~~~~   81 (249)
T PRK12827          3 SLDSRRVLITGGSGGLGRAIAVRLAADGADVIVLDIHPMRGRAEADAVAAGIEAAG-GKALGLAFDVRDFAATRAALDAG   81 (249)
T ss_pred             CcCCCEEEEECCCChHHHHHHHHHHHCCCeEEEEcCcccccHHHHHHHHHHHHhcC-CcEEEEEccCCCHHHHHHHHHHH
Confidence            4678999999999999999999999999999997764    333444444454433 37889999999999999999999


Q ss_pred             HhHcCCccEEEEccccCCcccccccCChHHHHHHHHhhhHHHHHHHHHHh-hhhhhc-CCeEEEEcCccccccCCCCccc
Q 044010          120 MNHFGRLDHLVNNAGISSVALFEDIVNITDFKQIMNINFWGSVYTTRFAV-PHLRYT-KGKIVVLSSAASWLTAPRMSFY  197 (248)
Q Consensus       120 ~~~~g~id~vv~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~-~~~~~~-~g~iV~isS~~~~~~~~~~~~Y  197 (248)
                      .+.++++|++|||+|.....+..+ .+.++|++.+++|+.+++.+++.+. +.+++. .+++|++||..+..+.++...|
T Consensus        82 ~~~~~~~d~vi~~ag~~~~~~~~~-~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~iv~~sS~~~~~~~~~~~~y  160 (249)
T PRK12827         82 VEEFGRLDILVNNAGIATDAAFAE-LSIEEWDDVIDVNLDGFFNVTQAALPPMIRARRGGRIVNIASVAGVRGNRGQVNY  160 (249)
T ss_pred             HHHhCCCCEEEECCCCCCCCCccc-CCHHHHHHHHHHhhhHHHHHHHHHHHHHHhcCCCeEEEEECCchhcCCCCCCchh
Confidence            998899999999999877655555 4779999999999999999999999 555543 3799999999998888889999


Q ss_pred             hHHHHHHHHHHHHHHHHhCC-CeEEEEEecCccccCcccccc
Q 044010          198 NASKAALVLFFETLRVELGS-DVGVTIVTPGFIESELTQGKF  238 (248)
Q Consensus       198 ~~sKaal~~l~~~la~~~~~-~i~v~~v~pg~v~T~~~~~~~  238 (248)
                      +++|++++.++++++.++.+ ++++++++||+++|++....+
T Consensus       161 ~~sK~a~~~~~~~l~~~~~~~~i~~~~i~pg~v~t~~~~~~~  202 (249)
T PRK12827        161 AASKAGLIGLTKTLANELAPRGITVNAVAPGAINTPMADNAA  202 (249)
T ss_pred             HHHHHHHHHHHHHHHHHhhhhCcEEEEEEECCcCCCcccccc
Confidence            99999999999999999976 599999999999999876554

>PRK12745 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional

Probab=99.97  E-value=1e-29  Score=213.72  Aligned_cols=188  Identities=28%  Similarity=0.453  Sum_probs=161.7

Q ss_pred             CCEEEEcCCCChHHHHHHHHHHHcCCeEEEEeCCcc-hHHHHHHHHHhhCCCcEEEEEccCCCHHHHHHHHHHHHhHcCC
Q 044010           47 GKVVIITGASSGIGEHLAYEYARRGACLALCARREK-SLEEVADTAREIGSPDVITIRADVSKVDDCRSLVEETMNHFGR  125 (248)
Q Consensus        47 ~k~~lVtGg~~gIG~aia~~l~~~G~~V~l~~r~~~-~~~~~~~~l~~~~~~~v~~~~~D~~~~~~~~~~~~~~~~~~g~  125 (248)
                      +|+++||||++|||.+++++|+++|++|++++|+.+ ..++..+.++..+ .++.++.+|+++++++.++++++.+.+++
T Consensus         2 ~k~vlItG~sg~iG~~la~~L~~~g~~vi~~~r~~~~~~~~~~~~~~~~~-~~~~~~~~D~~~~~~~~~~~~~~~~~~~~   80 (256)
T PRK12745          2 RPVALVTGGRRGIGLGIARALAAAGFDLAINDRPDDEELAATQQELRALG-VEVIFFPADVADLSAHEAMLDAAQAAWGR   80 (256)
T ss_pred             CcEEEEeCCCchHHHHHHHHHHHCCCEEEEEecCchhHHHHHHHHHHhcC-CceEEEEecCCCHHHHHHHHHHHHHhcCC
Confidence            579999999999999999999999999999998653 3444445554433 36889999999999999999999999999


Q ss_pred             ccEEEEccccCCc--ccccccCChHHHHHHHHhhhHHHHHHHHHHhhhhhhcC-------CeEEEEcCccccccCCCCcc
Q 044010          126 LDHLVNNAGISSV--ALFEDIVNITDFKQIMNINFWGSVYTTRFAVPHLRYTK-------GKIVVLSSAASWLTAPRMSF  196 (248)
Q Consensus       126 id~vv~~ag~~~~--~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~-------g~iV~isS~~~~~~~~~~~~  196 (248)
                      +|++|||||....  .++.+ .+.+++++.+++|+.+++.+++.+.+.|.+++       +++|++||..+..+.++...
T Consensus        81 id~vi~~ag~~~~~~~~~~~-~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~~~~~~iv~~sS~~~~~~~~~~~~  159 (256)
T PRK12745         81 IDCLVNNAGVGVKVRGDLLD-LTPESFDRVLAINLRGPFFLTQAVAKRMLAQPEPEELPHRSIVFVSSVNAIMVSPNRGE  159 (256)
T ss_pred             CCEEEECCccCCCCCCChhh-CCHHHHHHHHHhcchHHHHHHHHHHHHHHhccCcCCCCCcEEEEECChhhccCCCCCcc
Confidence            9999999997542  23333 56789999999999999999999999886432       46999999999888888899


Q ss_pred             chHHHHHHHHHHHHHHHHhCC-CeEEEEEecCccccCcccc
Q 044010          197 YNASKAALVLFFETLRVELGS-DVGVTIVTPGFIESELTQG  236 (248)
Q Consensus       197 Y~~sKaal~~l~~~la~~~~~-~i~v~~v~pg~v~T~~~~~  236 (248)
                      |++||++++.++++++.++.+ ++++++|+||++.|++...
T Consensus       160 Y~~sK~a~~~~~~~l~~~~~~~gi~v~~i~pg~v~t~~~~~  200 (256)
T PRK12745        160 YCISKAGLSMAAQLFAARLAEEGIGVYEVRPGLIKTDMTAP  200 (256)
T ss_pred             cHHHHHHHHHHHHHHHHHHHHhCCEEEEEecCCCcCccccc
Confidence            999999999999999999876 5999999999999998754

>PRK08177 short chain dehydrogenase; Provisional

Probab=99.97  E-value=3.8e-30  Score=212.88  Aligned_cols=182  Identities=24%  Similarity=0.318  Sum_probs=153.1

Q ss_pred             CEEEEcCCCChHHHHHHHHHHHcCCeEEEEeCCcchHHHHHHHHHhhCCCcEEEEEccCCCHHHHHHHHHHHHhHcCCcc
Q 044010           48 KVVIITGASSGIGEHLAYEYARRGACLALCARREKSLEEVADTAREIGSPDVITIRADVSKVDDCRSLVEETMNHFGRLD  127 (248)
Q Consensus        48 k~~lVtGg~~gIG~aia~~l~~~G~~V~l~~r~~~~~~~~~~~l~~~~~~~v~~~~~D~~~~~~~~~~~~~~~~~~g~id  127 (248)
                      |+++||||++|||.+++++|+++|++|++++|+.++.++.    ++..  ++.++.+|++|.++++++++.+.+  +++|
T Consensus         2 k~vlItG~sg~iG~~la~~l~~~G~~V~~~~r~~~~~~~~----~~~~--~~~~~~~D~~d~~~~~~~~~~~~~--~~id   73 (225)
T PRK08177          2 RTALIIGASRGLGLGLVDRLLERGWQVTATVRGPQQDTAL----QALP--GVHIEKLDMNDPASLDQLLQRLQG--QRFD   73 (225)
T ss_pred             CEEEEeCCCchHHHHHHHHHHhCCCEEEEEeCCCcchHHH----Hhcc--ccceEEcCCCCHHHHHHHHHHhhc--CCCC
Confidence            6899999999999999999999999999999998765433    2222  567788999999999999998854  4799


Q ss_pred             EEEEccccCCcc-cccccCChHHHHHHHHhhhHHHHHHHHHHhhhhhhcCCeEEEEcCccccccC---CCCccchHHHHH
Q 044010          128 HLVNNAGISSVA-LFEDIVNITDFKQIMNINFWGSVYTTRFAVPHLRYTKGKIVVLSSAASWLTA---PRMSFYNASKAA  203 (248)
Q Consensus       128 ~vv~~ag~~~~~-~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~g~iV~isS~~~~~~~---~~~~~Y~~sKaa  203 (248)
                      ++|||||...+. ....+.+.+++++.+.+|+.+++.+.+.+.+.+++..++++++||..+..+.   .++..|+++|++
T Consensus        74 ~vi~~ag~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~iv~~ss~~g~~~~~~~~~~~~Y~~sK~a  153 (225)
T PRK08177         74 LLFVNAGISGPAHQSAADATAAEIGQLFLTNAIAPIRLARRLLGQVRPGQGVLAFMSSQLGSVELPDGGEMPLYKASKAA  153 (225)
T ss_pred             EEEEcCcccCCCCCCcccCCHHHHhhheeeeeeHHHHHHHHHHHhhhhcCCEEEEEccCccccccCCCCCccchHHHHHH
Confidence            999999986432 2223357799999999999999999999999987555899999997765433   356789999999


Q ss_pred             HHHHHHHHHHHhCC-CeEEEEEecCccccCccccc
Q 044010          204 LVLFFETLRVELGS-DVGVTIVTPGFIESELTQGK  237 (248)
Q Consensus       204 l~~l~~~la~~~~~-~i~v~~v~pg~v~T~~~~~~  237 (248)
                      ++.++++++.++++ +|+||+|+||+++|++....
T Consensus       154 ~~~~~~~l~~e~~~~~i~v~~i~PG~i~t~~~~~~  188 (225)
T PRK08177        154 LNSMTRSFVAELGEPTLTVLSMHPGWVKTDMGGDN  188 (225)
T ss_pred             HHHHHHHHHHHhhcCCeEEEEEcCCceecCCCCCC
Confidence            99999999999976 49999999999999997654

>PRK06101 short chain dehydrogenase; Provisional

Probab=99.97  E-value=3.8e-30  Score=215.00  Aligned_cols=179  Identities=31%  Similarity=0.459  Sum_probs=153.3

Q ss_pred             CEEEEcCCCChHHHHHHHHHHHcCCeEEEEeCCcchHHHHHHHHHhhCCCcEEEEEccCCCHHHHHHHHHHHHhHcCCcc
Q 044010           48 KVVIITGASSGIGEHLAYEYARRGACLALCARREKSLEEVADTAREIGSPDVITIRADVSKVDDCRSLVEETMNHFGRLD  127 (248)
Q Consensus        48 k~~lVtGg~~gIG~aia~~l~~~G~~V~l~~r~~~~~~~~~~~l~~~~~~~v~~~~~D~~~~~~~~~~~~~~~~~~g~id  127 (248)
                      ++++||||++|||.+++++|+++|++|++++|++++.++..+    .. .++.++.+|++|.++++++++++..   .+|
T Consensus         2 ~~vlItGas~giG~~la~~L~~~G~~V~~~~r~~~~~~~~~~----~~-~~~~~~~~D~~~~~~~~~~~~~~~~---~~d   73 (240)
T PRK06101          2 TAVLITGATSGIGKQLALDYAKQGWQVIACGRNQSVLDELHT----QS-ANIFTLAFDVTDHPGTKAALSQLPF---IPE   73 (240)
T ss_pred             cEEEEEcCCcHHHHHHHHHHHhCCCEEEEEECCHHHHHHHHH----hc-CCCeEEEeeCCCHHHHHHHHHhccc---CCC
Confidence            689999999999999999999999999999998765544332    22 2678899999999999999987642   589


Q ss_pred             EEEEccccCCcccccccCChHHHHHHHHhhhHHHHHHHHHHhhhhhhcCCeEEEEcCccccccCCCCccchHHHHHHHHH
Q 044010          128 HLVNNAGISSVALFEDIVNITDFKQIMNINFWGSVYTTRFAVPHLRYTKGKIVVLSSAASWLTAPRMSFYNASKAALVLF  207 (248)
Q Consensus       128 ~vv~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~g~iV~isS~~~~~~~~~~~~Y~~sKaal~~l  207 (248)
                      .+|||||........ ..+.++|++.+++|+.+++++.+.+.|.|. .++++|++||..+..+.++...|++||++++++
T Consensus        74 ~~i~~ag~~~~~~~~-~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~-~~~~iv~isS~~~~~~~~~~~~Y~asK~a~~~~  151 (240)
T PRK06101         74 LWIFNAGDCEYMDDG-KVDATLMARVFNVNVLGVANCIEGIQPHLS-CGHRVVIVGSIASELALPRAEAYGASKAAVAYF  151 (240)
T ss_pred             EEEEcCcccccCCCC-CCCHHHHHHHHHHHHHHHHHHHHHHHHhhh-cCCeEEEEechhhccCCCCCchhhHHHHHHHHH
Confidence            999999865332222 246789999999999999999999999985 457899999999998888999999999999999


Q ss_pred             HHHHHHHhCC-CeEEEEEecCccccCcccc
Q 044010          208 FETLRVELGS-DVGVTIVTPGFIESELTQG  236 (248)
Q Consensus       208 ~~~la~~~~~-~i~v~~v~pg~v~T~~~~~  236 (248)
                      ++.++.|+.+ ++++++|.||+++|++.+.
T Consensus       152 ~~~l~~e~~~~gi~v~~v~pg~i~t~~~~~  181 (240)
T PRK06101        152 ARTLQLDLRPKGIEVVTVFPGFVATPLTDK  181 (240)
T ss_pred             HHHHHHHHHhcCceEEEEeCCcCCCCCcCC
Confidence            9999999976 5999999999999998764

>TIGR02632 RhaD_aldol-ADH rhamnulose-1-phosphate aldolase/alcohol dehydrogenase

Probab=99.97  E-value=6.9e-30  Score=241.52  Aligned_cols=188  Identities=25%  Similarity=0.363  Sum_probs=167.9

Q ss_pred             cCCCCCEEEEcCCCChHHHHHHHHHHHcCCeEEEEeCCcchHHHHHHHHHhhC-CCcEEEEEccCCCHHHHHHHHHHHHh
Q 044010           43 EDVSGKVVIITGASSGIGEHLAYEYARRGACLALCARREKSLEEVADTAREIG-SPDVITIRADVSKVDDCRSLVEETMN  121 (248)
Q Consensus        43 ~~~~~k~~lVtGg~~gIG~aia~~l~~~G~~V~l~~r~~~~~~~~~~~l~~~~-~~~v~~~~~D~~~~~~~~~~~~~~~~  121 (248)
                      ..+++|++|||||++|||++++++|+++|++|++++|+.+..+...+++.+.. ..++..+.+|++|.++++++++++.+
T Consensus       410 ~~l~gkvvLVTGasggIG~aiA~~La~~Ga~Vvi~~r~~~~~~~~~~~l~~~~~~~~~~~v~~Dvtd~~~v~~a~~~i~~  489 (676)
T TIGR02632       410 KTLARRVAFVTGGAGGIGRETARRLAAEGAHVVLADLNLEAAEAVAAEINGQFGAGRAVALKMDVTDEQAVKAAFADVAL  489 (676)
T ss_pred             cCCCCCEEEEeCCCcHHHHHHHHHHHhCCCEEEEEeCCHHHHHHHHHHHHhhcCCCcEEEEECCCCCHHHHHHHHHHHHH
Confidence            46789999999999999999999999999999999999887777777665432 33677899999999999999999999


Q ss_pred             HcCCccEEEEccccCCcccccccCChHHHHHHHHhhhHHHHHHHHHHhhhhhhc--CCeEEEEcCccccccCCCCccchH
Q 044010          122 HFGRLDHLVNNAGISSVALFEDIVNITDFKQIMNINFWGSVYTTRFAVPHLRYT--KGKIVVLSSAASWLTAPRMSFYNA  199 (248)
Q Consensus       122 ~~g~id~vv~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~--~g~iV~isS~~~~~~~~~~~~Y~~  199 (248)
                      .+|++|++|||||.....+..+ .+.++|+..+++|+.+++.+++.+.+.|++.  +|+||++||..+..+.++..+|++
T Consensus       490 ~~g~iDilV~nAG~~~~~~~~~-~~~e~~~~~~~vN~~g~~~l~~~al~~m~~~~~~g~IV~iSS~~a~~~~~~~~aY~a  568 (676)
T TIGR02632       490 AYGGVDIVVNNAGIATSSPFEE-TTLQEWQLNLDILATGYFLVAREAFRQMREQGLGGNIVFIASKNAVYAGKNASAYSA  568 (676)
T ss_pred             hcCCCcEEEECCCCCCCCCccc-CCHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCCEEEEEeChhhcCCCCCCHHHHH
Confidence            9999999999999876555544 4679999999999999999999999998754  379999999999988889999999


Q ss_pred             HHHHHHHHHHHHHHHhCCC-eEEEEEecCcccc
Q 044010          200 SKAALVLFFETLRVELGSD-VGVTIVTPGFIES  231 (248)
Q Consensus       200 sKaal~~l~~~la~~~~~~-i~v~~v~pg~v~T  231 (248)
                      ||+++++++++++.++++. ||||+|+||.|.|
T Consensus       569 SKaA~~~l~r~lA~el~~~gIrVn~V~Pg~V~~  601 (676)
T TIGR02632       569 AKAAEAHLARCLAAEGGTYGIRVNTVNPDAVLQ  601 (676)
T ss_pred             HHHHHHHHHHHHHHHhcccCeEEEEEECCceec
Confidence            9999999999999999874 9999999999965

>PRK12826 3-ketoacyl-(acyl-carrier-protein) reductase; Reviewed

Probab=99.97  E-value=1.4e-29  Score=211.98  Aligned_cols=192  Identities=30%  Similarity=0.479  Sum_probs=170.6

Q ss_pred             CCCCCEEEEcCCCChHHHHHHHHHHHcCCeEEEEeCCcchHHHHHHHHHhhCCCcEEEEEccCCCHHHHHHHHHHHHhHc
Q 044010           44 DVSGKVVIITGASSGIGEHLAYEYARRGACLALCARREKSLEEVADTAREIGSPDVITIRADVSKVDDCRSLVEETMNHF  123 (248)
Q Consensus        44 ~~~~k~~lVtGg~~gIG~aia~~l~~~G~~V~l~~r~~~~~~~~~~~l~~~~~~~v~~~~~D~~~~~~~~~~~~~~~~~~  123 (248)
                      ++++|+++||||+++||.+++++|+++|++|++++|+.++.+...+++.+.+. ++.++.+|++|.++++++++++.+.+
T Consensus         3 ~~~~~~ilItGasg~iG~~l~~~l~~~g~~V~~~~r~~~~~~~~~~~l~~~~~-~~~~~~~Dl~~~~~~~~~~~~~~~~~   81 (251)
T PRK12826          3 DLEGRVALVTGAARGIGRAIAVRLAADGAEVIVVDICGDDAAATAELVEAAGG-KARARQVDVRDRAALKAAVAAGVEDF   81 (251)
T ss_pred             CCCCCEEEEcCCCCcHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcCC-eEEEEECCCCCHHHHHHHHHHHHHHh
Confidence            57889999999999999999999999999999999998877777777765543 68899999999999999999999999


Q ss_pred             CCccEEEEccccCCcccccccCChHHHHHHHHhhhHHHHHHHHHHhhhhhhc-CCeEEEEcCcccc-ccCCCCccchHHH
Q 044010          124 GRLDHLVNNAGISSVALFEDIVNITDFKQIMNINFWGSVYTTRFAVPHLRYT-KGKIVVLSSAASW-LTAPRMSFYNASK  201 (248)
Q Consensus       124 g~id~vv~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~-~g~iV~isS~~~~-~~~~~~~~Y~~sK  201 (248)
                      +++|++||++|.....+..+ .+.+++++.++.|+.+++.+++.+.+.|.+. .+++|++||..+. .+.++...|+++|
T Consensus        82 ~~~d~vi~~ag~~~~~~~~~-~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~ii~~ss~~~~~~~~~~~~~y~~sK  160 (251)
T PRK12826         82 GRLDILVANAGIFPLTPFAE-MDDEQWERVIDVNLTGTFLLTQAALPALIRAGGGRIVLTSSVAGPRVGYPGLAHYAASK  160 (251)
T ss_pred             CCCCEEEECCCCCCCCChhh-CCHHHHHHHHHHhhHHHHHHHHHHHHHHHHcCCcEEEEEechHhhccCCCCccHHHHHH
Confidence            99999999999877655444 4678999999999999999999999998654 4799999999888 7778888999999


Q ss_pred             HHHHHHHHHHHHHhCC-CeEEEEEecCccccCccccc
Q 044010          202 AALVLFFETLRVELGS-DVGVTIVTPGFIESELTQGK  237 (248)
Q Consensus       202 aal~~l~~~la~~~~~-~i~v~~v~pg~v~T~~~~~~  237 (248)
                      ++++.+++.++.++.+ +++++.+.||.+.|+..+..
T Consensus       161 ~a~~~~~~~~~~~~~~~~i~~~~i~pg~~~~~~~~~~  197 (251)
T PRK12826        161 AGLVGFTRALALELAARNITVNSVHPGGVDTPMAGNL  197 (251)
T ss_pred             HHHHHHHHHHHHHHHHcCeEEEEEeeCCCCcchhhhc
Confidence            9999999999999865 59999999999999976544

>PRK09730 putative NAD(P)-binding oxidoreductase; Provisional

Probab=99.97  E-value=1.7e-29  Score=211.01  Aligned_cols=187  Identities=29%  Similarity=0.393  Sum_probs=160.2

Q ss_pred             CEEEEcCCCChHHHHHHHHHHHcCCeEEE-EeCCcchHHHHHHHHHhhCCCcEEEEEccCCCHHHHHHHHHHHHhHcCCc
Q 044010           48 KVVIITGASSGIGEHLAYEYARRGACLAL-CARREKSLEEVADTAREIGSPDVITIRADVSKVDDCRSLVEETMNHFGRL  126 (248)
Q Consensus        48 k~~lVtGg~~gIG~aia~~l~~~G~~V~l-~~r~~~~~~~~~~~l~~~~~~~v~~~~~D~~~~~~~~~~~~~~~~~~g~i  126 (248)
                      |+++||||+++||.+++++|+++|++|++ ..|+.++.++..++++..+ .++..+.+|++|.++++++++++.+.++++
T Consensus         2 ~~~lItGa~g~iG~~l~~~l~~~g~~v~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~D~~d~~~i~~~~~~~~~~~~~i   80 (247)
T PRK09730          2 AIALVTGGSRGIGRATALLLAQEGYTVAVNYQQNLHAAQEVVNLITQAG-GKAFVLQADISDENQVVAMFTAIDQHDEPL   80 (247)
T ss_pred             CEEEEeCCCchHHHHHHHHHHHCCCEEEEEeCCChHHHHHHHHHHHhCC-CeEEEEEccCCCHHHHHHHHHHHHHhCCCC
Confidence            68999999999999999999999999876 4677766666666665544 368889999999999999999999899999


Q ss_pred             cEEEEccccCCcccccccCChHHHHHHHHhhhHHHHHHHHHHhhhhhhc----CCeEEEEcCccccccCCC-CccchHHH
Q 044010          127 DHLVNNAGISSVALFEDIVNITDFKQIMNINFWGSVYTTRFAVPHLRYT----KGKIVVLSSAASWLTAPR-MSFYNASK  201 (248)
Q Consensus       127 d~vv~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~----~g~iV~isS~~~~~~~~~-~~~Y~~sK  201 (248)
                      |++|||+|...........+.++++..+++|+.+++.+++.+++.+.++    +|++|++||..+..+.++ +..|+++|
T Consensus        81 d~vi~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~~~g~~v~~sS~~~~~~~~~~~~~Y~~sK  160 (247)
T PRK09730         81 AALVNNAGILFTQCTVENLTAERINRVLSTNVTGYFLCCREAVKRMALKHGGSGGAIVNVSSAASRLGAPGEYVDYAASK  160 (247)
T ss_pred             CEEEECCCCCCCCCccccCCHHHHHHHHhhhhHHHHHHHHHHHHHHHhcCCCCCcEEEEECchhhccCCCCcccchHhHH
Confidence            9999999976433333335778999999999999999999999988644    478999999988877765 46899999


Q ss_pred             HHHHHHHHHHHHHhCC-CeEEEEEecCccccCccc
Q 044010          202 AALVLFFETLRVELGS-DVGVTIVTPGFIESELTQ  235 (248)
Q Consensus       202 aal~~l~~~la~~~~~-~i~v~~v~pg~v~T~~~~  235 (248)
                      +++++++++++.++.+ ++++++++||.+.|++..
T Consensus       161 ~~~~~~~~~l~~~~~~~~i~v~~i~pg~~~~~~~~  195 (247)
T PRK09730        161 GAIDTLTTGLSLEVAAQGIRVNCVRPGFIYTEMHA  195 (247)
T ss_pred             HHHHHHHHHHHHHHHHhCeEEEEEEeCCCcCcccc
Confidence            9999999999999966 599999999999999754

>PRK07578 short chain dehydrogenase; Provisional

Probab=99.97  E-value=6.6e-30  Score=207.62  Aligned_cols=162  Identities=22%  Similarity=0.324  Sum_probs=144.7

Q ss_pred             EEEEcCCCChHHHHHHHHHHHcCCeEEEEeCCcchHHHHHHHHHhhCCCcEEEEEccCCCHHHHHHHHHHHHhHcCCccE
Q 044010           49 VVIITGASSGIGEHLAYEYARRGACLALCARREKSLEEVADTAREIGSPDVITIRADVSKVDDCRSLVEETMNHFGRLDH  128 (248)
Q Consensus        49 ~~lVtGg~~gIG~aia~~l~~~G~~V~l~~r~~~~~~~~~~~l~~~~~~~v~~~~~D~~~~~~~~~~~~~~~~~~g~id~  128 (248)
                      +++||||++|||.+++++|+++ ++|++.+|+..                  .+.||++|.+++++++++    ++++|+
T Consensus         2 ~vlItGas~giG~~la~~l~~~-~~vi~~~r~~~------------------~~~~D~~~~~~~~~~~~~----~~~id~   58 (199)
T PRK07578          2 KILVIGASGTIGRAVVAELSKR-HEVITAGRSSG------------------DVQVDITDPASIRALFEK----VGKVDA   58 (199)
T ss_pred             eEEEEcCCcHHHHHHHHHHHhc-CcEEEEecCCC------------------ceEecCCChHHHHHHHHh----cCCCCE
Confidence            6999999999999999999999 99999999753                  368999999999998875    478999


Q ss_pred             EEEccccCCcccccccCChHHHHHHHHhhhHHHHHHHHHHhhhhhhcCCeEEEEcCccccccCCCCccchHHHHHHHHHH
Q 044010          129 LVNNAGISSVALFEDIVNITDFKQIMNINFWGSVYTTRFAVPHLRYTKGKIVVLSSAASWLTAPRMSFYNASKAALVLFF  208 (248)
Q Consensus       129 vv~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~g~iV~isS~~~~~~~~~~~~Y~~sKaal~~l~  208 (248)
                      +|||||.....+..+ .+.++|++.+++|+.+++++++.+.|.|. ++|+|+++||..+..+.++...|+++|+++++++
T Consensus        59 lv~~ag~~~~~~~~~-~~~~~~~~~~~~n~~~~~~l~~~~~~~~~-~~g~iv~iss~~~~~~~~~~~~Y~~sK~a~~~~~  136 (199)
T PRK07578         59 VVSAAGKVHFAPLAE-MTDEDFNVGLQSKLMGQVNLVLIGQHYLN-DGGSFTLTSGILSDEPIPGGASAATVNGALEGFV  136 (199)
T ss_pred             EEECCCCCCCCchhh-CCHHHHHHHHHHHHHHHHHHHHHHHHHHh-cCCeEEEEcccccCCCCCCchHHHHHHHHHHHHH
Confidence            999999876555544 46789999999999999999999999986 4589999999999888899999999999999999


Q ss_pred             HHHHHHhCCCeEEEEEecCccccCccc
Q 044010          209 ETLRVELGSDVGVTIVTPGFIESELTQ  235 (248)
Q Consensus       209 ~~la~~~~~~i~v~~v~pg~v~T~~~~  235 (248)
                      ++++.|+.++|+||+|+||+++|++..
T Consensus       137 ~~la~e~~~gi~v~~i~Pg~v~t~~~~  163 (199)
T PRK07578        137 KAAALELPRGIRINVVSPTVLTESLEK  163 (199)
T ss_pred             HHHHHHccCCeEEEEEcCCcccCchhh
Confidence            999999933599999999999999753

>PRK06924 short chain dehydrogenase; Provisional

Probab=99.97  E-value=7.8e-30  Score=213.97  Aligned_cols=185  Identities=23%  Similarity=0.307  Sum_probs=155.8

Q ss_pred             CEEEEcCCCChHHHHHHHHHHHcCCeEEEEeCCcc-hHHHHHHHHHhhCCCcEEEEEccCCCHHHHHHHHHHHHhHcCCc
Q 044010           48 KVVIITGASSGIGEHLAYEYARRGACLALCARREK-SLEEVADTAREIGSPDVITIRADVSKVDDCRSLVEETMNHFGRL  126 (248)
Q Consensus        48 k~~lVtGg~~gIG~aia~~l~~~G~~V~l~~r~~~-~~~~~~~~l~~~~~~~v~~~~~D~~~~~~~~~~~~~~~~~~g~i  126 (248)
                      |+++||||++|||++++++|+++|++|++++|+.. .++    .+.+..+.+++++.+|+++.++++++++++.+.++..
T Consensus         2 k~vlItGasggiG~~ia~~l~~~g~~V~~~~r~~~~~~~----~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~~   77 (251)
T PRK06924          2 RYVIITGTSQGLGEAIANQLLEKGTHVISISRTENKELT----KLAEQYNSNLTFHSLDLQDVHELETNFNEILSSIQED   77 (251)
T ss_pred             cEEEEecCCchHHHHHHHHHHhcCCEEEEEeCCchHHHH----HHHhccCCceEEEEecCCCHHHHHHHHHHHHHhcCcc
Confidence            68999999999999999999999999999999863 222    2222223478899999999999999999998776532


Q ss_pred             ----cEEEEccccCCcccccccCChHHHHHHHHhhhHHHHHHHHHHhhhhhhc--CCeEEEEcCccccccCCCCccchHH
Q 044010          127 ----DHLVNNAGISSVALFEDIVNITDFKQIMNINFWGSVYTTRFAVPHLRYT--KGKIVVLSSAASWLTAPRMSFYNAS  200 (248)
Q Consensus       127 ----d~vv~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~--~g~iV~isS~~~~~~~~~~~~Y~~s  200 (248)
                          +++|||+|...+....+..+.++|.+.+++|+.+++.+++.++|.|.+.  .++||++||..+..+.++..+|+++
T Consensus        78 ~~~~~~~v~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~~~iv~~sS~~~~~~~~~~~~Y~~s  157 (251)
T PRK06924         78 NVSSIHLINNAGMVAPIKPIEKAESEELITNVHLNLLAPMILTSTFMKHTKDWKVDKRVINISSGAAKNPYFGWSAYCSS  157 (251)
T ss_pred             cCCceEEEEcceecccCcccccCCHHHHHHHhccceehHHHHHHHHHHHHhccCCCceEEEecchhhcCCCCCcHHHhHH
Confidence                2899999976543333335789999999999999999999999998753  3799999999998898999999999


Q ss_pred             HHHHHHHHHHHHHHhC--C-CeEEEEEecCccccCcccc
Q 044010          201 KAALVLFFETLRVELG--S-DVGVTIVTPGFIESELTQG  236 (248)
Q Consensus       201 Kaal~~l~~~la~~~~--~-~i~v~~v~pg~v~T~~~~~  236 (248)
                      |+|++++++.++.|++  + +++|++|.||+++|++...
T Consensus       158 Kaa~~~~~~~la~e~~~~~~~i~v~~v~Pg~v~t~~~~~  196 (251)
T PRK06924        158 KAGLDMFTQTVATEQEEEEYPVKIVAFSPGVMDTNMQAQ  196 (251)
T ss_pred             HHHHHHHHHHHHHHhhhcCCCeEEEEecCCccccHhHHH
Confidence            9999999999999985  2 5999999999999998653

>PRK05557 fabG 3-ketoacyl-(acyl-carrier-protein) reductase; Validated

Probab=99.97  E-value=4.2e-29  Score=208.34  Aligned_cols=193  Identities=31%  Similarity=0.501  Sum_probs=167.0

Q ss_pred             cCCCCCEEEEcCCCChHHHHHHHHHHHcCCeEEEEeCCcch-HHHHHHHHHhhCCCcEEEEEccCCCHHHHHHHHHHHHh
Q 044010           43 EDVSGKVVIITGASSGIGEHLAYEYARRGACLALCARREKS-LEEVADTAREIGSPDVITIRADVSKVDDCRSLVEETMN  121 (248)
Q Consensus        43 ~~~~~k~~lVtGg~~gIG~aia~~l~~~G~~V~l~~r~~~~-~~~~~~~l~~~~~~~v~~~~~D~~~~~~~~~~~~~~~~  121 (248)
                      +++++|+++||||+++||.+++++|+++|++|+++.|+.++ .+...+++++.+ .++.++.+|+++.+++.++++++.+
T Consensus         1 ~~~~~~~vlItG~sg~iG~~l~~~l~~~G~~v~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~Dl~~~~~~~~~~~~~~~   79 (248)
T PRK05557          1 MSLEGKVALVTGASRGIGRAIAERLAAQGANVVINYASSEAGAEALVAEIGALG-GKALAVQGDVSDAESVERAVDEAKA   79 (248)
T ss_pred             CCCCCCEEEEECCCchHHHHHHHHHHHCCCEEEEEeCCchhHHHHHHHHHHhcC-CceEEEEcCCCCHHHHHHHHHHHHH
Confidence            36788999999999999999999999999999888886653 445555554443 4788999999999999999999999


Q ss_pred             HcCCccEEEEccccCCcccccccCChHHHHHHHHhhhHHHHHHHHHHhhhhhhcC-CeEEEEcCccccccCCCCccchHH
Q 044010          122 HFGRLDHLVNNAGISSVALFEDIVNITDFKQIMNINFWGSVYTTRFAVPHLRYTK-GKIVVLSSAASWLTAPRMSFYNAS  200 (248)
Q Consensus       122 ~~g~id~vv~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~-g~iV~isS~~~~~~~~~~~~Y~~s  200 (248)
                      .++++|++||++|.....+..+ .+.+++++.+.+|+.+++.+.+.+.+.+.+.+ +++|++||..+..+.++...|+++
T Consensus        80 ~~~~id~vi~~ag~~~~~~~~~-~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~v~iss~~~~~~~~~~~~y~~s  158 (248)
T PRK05557         80 EFGGVDILVNNAGITRDNLLMR-MKEEDWDRVIDTNLTGVFNLTKAVARPMMKQRSGRIINISSVVGLMGNPGQANYAAS  158 (248)
T ss_pred             HcCCCCEEEECCCcCCCCCccc-CCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcCCeEEEEEcccccCcCCCCCchhHHH
Confidence            9999999999999876654444 46789999999999999999999999986543 789999999888888889999999


Q ss_pred             HHHHHHHHHHHHHHhCC-CeEEEEEecCccccCccccc
Q 044010          201 KAALVLFFETLRVELGS-DVGVTIVTPGFIESELTQGK  237 (248)
Q Consensus       201 Kaal~~l~~~la~~~~~-~i~v~~v~pg~v~T~~~~~~  237 (248)
                      |++++++++.++.++++ ++++++++||+++|++.+..
T Consensus       159 k~a~~~~~~~~a~~~~~~~i~~~~v~pg~~~~~~~~~~  196 (248)
T PRK05557        159 KAGVIGFTKSLARELASRGITVNAVAPGFIETDMTDAL  196 (248)
T ss_pred             HHHHHHHHHHHHHHhhhhCeEEEEEecCccCCcccccc
Confidence            99999999999999976 49999999999999987654

>PRK12828 short chain dehydrogenase; Provisional

Probab=99.97  E-value=2.5e-29  Score=208.78  Aligned_cols=191  Identities=29%  Similarity=0.390  Sum_probs=166.7

Q ss_pred             ccCCCCCEEEEcCCCChHHHHHHHHHHHcCCeEEEEeCCcchHHHHHHHHHhhCCCcEEEEEccCCCHHHHHHHHHHHHh
Q 044010           42 SEDVSGKVVIITGASSGIGEHLAYEYARRGACLALCARREKSLEEVADTAREIGSPDVITIRADVSKVDDCRSLVEETMN  121 (248)
Q Consensus        42 ~~~~~~k~~lVtGg~~gIG~aia~~l~~~G~~V~l~~r~~~~~~~~~~~l~~~~~~~v~~~~~D~~~~~~~~~~~~~~~~  121 (248)
                      .+++++|++|||||+++||++++++|+++|++|++++|+.++.++..+++...   .+..+.+|++|.++++++++++.+
T Consensus         2 ~~~~~~k~vlItGatg~iG~~la~~l~~~G~~v~~~~r~~~~~~~~~~~~~~~---~~~~~~~D~~~~~~~~~~~~~~~~   78 (239)
T PRK12828          2 EHSLQGKVVAITGGFGGLGRATAAWLAARGARVALIGRGAAPLSQTLPGVPAD---ALRIGGIDLVDPQAARRAVDEVNR   78 (239)
T ss_pred             CCCCCCCEEEEECCCCcHhHHHHHHHHHCCCeEEEEeCChHhHHHHHHHHhhc---CceEEEeecCCHHHHHHHHHHHHH
Confidence            35688999999999999999999999999999999999987666655555432   456788999999999999999999


Q ss_pred             HcCCccEEEEccccCCcccccccCChHHHHHHHHhhhHHHHHHHHHHhhhhhhc-CCeEEEEcCccccccCCCCccchHH
Q 044010          122 HFGRLDHLVNNAGISSVALFEDIVNITDFKQIMNINFWGSVYTTRFAVPHLRYT-KGKIVVLSSAASWLTAPRMSFYNAS  200 (248)
Q Consensus       122 ~~g~id~vv~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~-~g~iV~isS~~~~~~~~~~~~Y~~s  200 (248)
                      +++++|++||++|........+ .+.+++++.+.+|+.+++.+++.+.+.+.+. .+++|++||..+..+.++...|+++
T Consensus        79 ~~~~~d~vi~~ag~~~~~~~~~-~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~~iv~~sS~~~~~~~~~~~~y~~s  157 (239)
T PRK12828         79 QFGRLDALVNIAGAFVWGTIAD-GDADTWDRMYGVNVKTTLNASKAALPALTASGGGRIVNIGAGAALKAGPGMGAYAAA  157 (239)
T ss_pred             HhCCcCEEEECCcccCcCChhh-CCHHHHHHHHHhhchhHHHHHHHHHHHHHhcCCCEEEEECchHhccCCCCcchhHHH
Confidence            9999999999999765544444 3678999999999999999999999998644 4899999999998888888999999


Q ss_pred             HHHHHHHHHHHHHHhCC-CeEEEEEecCccccCcccc
Q 044010          201 KAALVLFFETLRVELGS-DVGVTIVTPGFIESELTQG  236 (248)
Q Consensus       201 Kaal~~l~~~la~~~~~-~i~v~~v~pg~v~T~~~~~  236 (248)
                      |++++.+++.++.++.+ +++++++.||.+.|++...
T Consensus       158 k~a~~~~~~~~a~~~~~~~i~~~~i~pg~v~~~~~~~  194 (239)
T PRK12828        158 KAGVARLTEALAAELLDRGITVNAVLPSIIDTPPNRA  194 (239)
T ss_pred             HHHHHHHHHHHHHHhhhcCeEEEEEecCcccCcchhh
Confidence            99999999999999866 4999999999999987544

>PRK07060 short chain dehydrogenase; Provisional

Probab=99.97  E-value=1.7e-29  Score=210.96  Aligned_cols=183  Identities=34%  Similarity=0.443  Sum_probs=158.5

Q ss_pred             cCCCCCEEEEcCCCChHHHHHHHHHHHcCCeEEEEeCCcchHHHHHHHHHhhCCCcEEEEEccCCCHHHHHHHHHHHHhH
Q 044010           43 EDVSGKVVIITGASSGIGEHLAYEYARRGACLALCARREKSLEEVADTAREIGSPDVITIRADVSKVDDCRSLVEETMNH  122 (248)
Q Consensus        43 ~~~~~k~~lVtGg~~gIG~aia~~l~~~G~~V~l~~r~~~~~~~~~~~l~~~~~~~v~~~~~D~~~~~~~~~~~~~~~~~  122 (248)
                      .++++|+++||||+++||.++++.|+++|++|++++|+.++.++..++.      ...++.+|+++.++++++++.    
T Consensus         5 ~~~~~~~~lItGa~g~iG~~~a~~l~~~g~~V~~~~r~~~~~~~~~~~~------~~~~~~~D~~~~~~v~~~~~~----   74 (245)
T PRK07060          5 FDFSGKSVLVTGASSGIGRACAVALAQRGARVVAAARNAAALDRLAGET------GCEPLRLDVGDDAAIRAALAA----   74 (245)
T ss_pred             cccCCCEEEEeCCcchHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHh------CCeEEEecCCCHHHHHHHHHH----
Confidence            4688999999999999999999999999999999999876655443322      345788999999988887765    


Q ss_pred             cCCccEEEEccccCCcccccccCChHHHHHHHHhhhHHHHHHHHHHhhhhhhcC--CeEEEEcCccccccCCCCccchHH
Q 044010          123 FGRLDHLVNNAGISSVALFEDIVNITDFKQIMNINFWGSVYTTRFAVPHLRYTK--GKIVVLSSAASWLTAPRMSFYNAS  200 (248)
Q Consensus       123 ~g~id~vv~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~--g~iV~isS~~~~~~~~~~~~Y~~s  200 (248)
                      .+++|++|||+|.....+..+ .+.+++++.+.+|+.+++.+++++.+.+.+.+  +++|++||..+..+.++...|++|
T Consensus        75 ~~~~d~vi~~ag~~~~~~~~~-~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~iv~~sS~~~~~~~~~~~~y~~s  153 (245)
T PRK07060         75 AGAFDGLVNCAGIASLESALD-MTAEGFDRVMAVNARGAALVARHVARAMIAAGRGGSIVNVSSQAALVGLPDHLAYCAS  153 (245)
T ss_pred             hCCCCEEEECCCCCCCCChhh-CCHHHHHHHHHHHhHHHHHHHHHHHHHHHHcCCCcEEEEEccHHHcCCCCCCcHhHHH
Confidence            478999999999876555444 46789999999999999999999999886554  799999999999888889999999


Q ss_pred             HHHHHHHHHHHHHHhCC-CeEEEEEecCccccCcccc
Q 044010          201 KAALVLFFETLRVELGS-DVGVTIVTPGFIESELTQG  236 (248)
Q Consensus       201 Kaal~~l~~~la~~~~~-~i~v~~v~pg~v~T~~~~~  236 (248)
                      |++++.+++.++.++.+ ++++++++||++.|++.+.
T Consensus       154 K~a~~~~~~~~a~~~~~~~i~v~~v~pg~v~~~~~~~  190 (245)
T PRK07060        154 KAALDAITRVLCVELGPHGIRVNSVNPTVTLTPMAAE  190 (245)
T ss_pred             HHHHHHHHHHHHHHHhhhCeEEEEEeeCCCCCchhhh
Confidence            99999999999999976 5999999999999998653

>KOG1210 consensus Predicted 3-ketosphinganine reductase [Secondary metabolites biosynthesis, transport and catabolism]

Probab=99.97  E-value=3.4e-29  Score=209.32  Aligned_cols=189  Identities=31%  Similarity=0.394  Sum_probs=174.5

Q ss_pred             CEEEEcCCCChHHHHHHHHHHHcCCeEEEEeCCcchHHHHHHHHHhhCC-CcEEEEEccCCCHHHHHHHHHHHHhHcCCc
Q 044010           48 KVVIITGASSGIGEHLAYEYARRGACLALCARREKSLEEVADTAREIGS-PDVITIRADVSKVDDCRSLVEETMNHFGRL  126 (248)
Q Consensus        48 k~~lVtGg~~gIG~aia~~l~~~G~~V~l~~r~~~~~~~~~~~l~~~~~-~~v~~~~~D~~~~~~~~~~~~~~~~~~g~i  126 (248)
                      ++++||||++|||.++|+.+..+|++|-++.|+.+++.++..+++-... .++.+..+|++|.++++.+++++++..+.+
T Consensus        34 ~hi~itggS~glgl~la~e~~~~ga~Vti~ar~~~kl~~a~~~l~l~~~~~~v~~~S~d~~~Y~~v~~~~~~l~~~~~~~  113 (331)
T KOG1210|consen   34 RHILITGGSSGLGLALALECKREGADVTITARSGKKLLEAKAELELLTQVEDVSYKSVDVIDYDSVSKVIEELRDLEGPI  113 (331)
T ss_pred             ceEEEecCcchhhHHHHHHHHHccCceEEEeccHHHHHHHHhhhhhhhccceeeEeccccccHHHHHHHHhhhhhccCCc
Confidence            8999999999999999999999999999999999999999988875543 237789999999999999999999999999


Q ss_pred             cEEEEccccCCcccccccCChHHHHHHHHhhhHHHHHHHHHHhhhhhhcC--CeEEEEcCccccccCCCCccchHHHHHH
Q 044010          127 DHLVNNAGISSVALFEDIVNITDFKQIMNINFWGSVYTTRFAVPHLRYTK--GKIVVLSSAASWLTAPRMSFYNASKAAL  204 (248)
Q Consensus       127 d~vv~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~--g~iV~isS~~~~~~~~~~~~Y~~sKaal  204 (248)
                      |.+++|||...++.+++ .+.++++..+++|+.++++++++..+.|++..  |+|+.+||.++..+..++++|+++|+|+
T Consensus       114 d~l~~cAG~~v~g~f~~-~s~~~v~~~m~vNylgt~~v~~~~~~~mk~~~~~g~I~~vsS~~a~~~i~GysaYs~sK~al  192 (331)
T KOG1210|consen  114 DNLFCCAGVAVPGLFED-LSPEVVEKLMDVNYLGTVNVAKAAARAMKKREHLGRIILVSSQLAMLGIYGYSAYSPSKFAL  192 (331)
T ss_pred             ceEEEecCccccccccc-CCHHHHHHHHHhhhhhhHHHHHHHHHHhhccccCcEEEEehhhhhhcCcccccccccHHHHH
Confidence            99999999998888887 48899999999999999999999999998554  6999999999999999999999999999


Q ss_pred             HHHHHHHHHHhCC-CeEEEEEecCccccCccccc
Q 044010          205 VLFFETLRVELGS-DVGVTIVTPGFIESELTQGK  237 (248)
Q Consensus       205 ~~l~~~la~~~~~-~i~v~~v~pg~v~T~~~~~~  237 (248)
                      .+|+..+++|..+ +++|....|+.++||-+...
T Consensus       193 rgLa~~l~qE~i~~~v~Vt~~~P~~~~tpGfE~E  226 (331)
T KOG1210|consen  193 RGLAEALRQELIKYGVHVTLYYPPDTLTPGFERE  226 (331)
T ss_pred             HHHHHHHHHHHhhcceEEEEEcCCCCCCCccccc
Confidence            9999999999976 59999999999999965543

>PRK07074 short chain dehydrogenase; Provisional

Probab=99.97  E-value=3.9e-29  Score=210.54  Aligned_cols=184  Identities=21%  Similarity=0.331  Sum_probs=160.7

Q ss_pred             CCEEEEcCCCChHHHHHHHHHHHcCCeEEEEeCCcchHHHHHHHHHhhCCCcEEEEEccCCCHHHHHHHHHHHHhHcCCc
Q 044010           47 GKVVIITGASSGIGEHLAYEYARRGACLALCARREKSLEEVADTAREIGSPDVITIRADVSKVDDCRSLVEETMNHFGRL  126 (248)
Q Consensus        47 ~k~~lVtGg~~gIG~aia~~l~~~G~~V~l~~r~~~~~~~~~~~l~~~~~~~v~~~~~D~~~~~~~~~~~~~~~~~~g~i  126 (248)
                      +|+++||||+++||.+++++|+++|++|++++|+.++.+...+.+.   +.++.++.+|++|.+++.++++++.+.++++
T Consensus         2 ~k~ilItGat~~iG~~la~~L~~~g~~v~~~~r~~~~~~~~~~~~~---~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~~   78 (257)
T PRK07074          2 KRTALVTGAAGGIGQALARRFLAAGDRVLALDIDAAALAAFADALG---DARFVPVACDLTDAASLAAALANAAAERGPV   78 (257)
T ss_pred             CCEEEEECCcchHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHhc---CCceEEEEecCCCHHHHHHHHHHHHHHcCCC
Confidence            6899999999999999999999999999999999877766665552   2368889999999999999999999999999


Q ss_pred             cEEEEccccCCcccccccCChHHHHHHHHhhhHHHHHHHHHHhhhhhhc-CCeEEEEcCccccccCCCCccchHHHHHHH
Q 044010          127 DHLVNNAGISSVALFEDIVNITDFKQIMNINFWGSVYTTRFAVPHLRYT-KGKIVVLSSAASWLTAPRMSFYNASKAALV  205 (248)
Q Consensus       127 d~vv~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~-~g~iV~isS~~~~~~~~~~~~Y~~sKaal~  205 (248)
                      |++||++|...+.+..+ .+.++|...+.+|+.+++.+.+++.+.+.++ .+++|++||..+..+ .+.+.|+++|++++
T Consensus        79 d~vi~~ag~~~~~~~~~-~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~~iv~~sS~~~~~~-~~~~~y~~sK~a~~  156 (257)
T PRK07074         79 DVLVANAGAARAASLHD-TTPASWRADNALNLEAAYLCVEAVLEGMLKRSRGAVVNIGSVNGMAA-LGHPAYSAAKAGLI  156 (257)
T ss_pred             CEEEECCCCCCCCChhh-CCHHHHHHHHHHhhHHHHHHHHHHHHHHHHcCCeEEEEEcchhhcCC-CCCcccHHHHHHHH
Confidence            99999999876554444 4679999999999999999999999988644 489999999776543 45678999999999


Q ss_pred             HHHHHHHHHhCC-CeEEEEEecCccccCccc
Q 044010          206 LFFETLRVELGS-DVGVTIVTPGFIESELTQ  235 (248)
Q Consensus       206 ~l~~~la~~~~~-~i~v~~v~pg~v~T~~~~  235 (248)
                      +++++++.++++ +++|++++||+++|++..
T Consensus       157 ~~~~~~a~~~~~~gi~v~~v~pg~v~t~~~~  187 (257)
T PRK07074        157 HYTKLLAVEYGRFGIRANAVAPGTVKTQAWE  187 (257)
T ss_pred             HHHHHHHHHHhHhCeEEEEEEeCcCCcchhh
Confidence            999999999987 599999999999999854

>PRK05653 fabG 3-ketoacyl-(acyl-carrier-protein) reductase; Validated

Probab=99.97  E-value=6.2e-29  Score=207.09  Aligned_cols=192  Identities=34%  Similarity=0.570  Sum_probs=170.4

Q ss_pred             cCCCCCEEEEcCCCChHHHHHHHHHHHcCCeEEEEeCCcchHHHHHHHHHhhCCCcEEEEEccCCCHHHHHHHHHHHHhH
Q 044010           43 EDVSGKVVIITGASSGIGEHLAYEYARRGACLALCARREKSLEEVADTAREIGSPDVITIRADVSKVDDCRSLVEETMNH  122 (248)
Q Consensus        43 ~~~~~k~~lVtGg~~gIG~aia~~l~~~G~~V~l~~r~~~~~~~~~~~l~~~~~~~v~~~~~D~~~~~~~~~~~~~~~~~  122 (248)
                      ++|++|+++||||+++||.+++++|+++|++|++++|++++.+...+.++..+. ++.++.+|++|.+++.++++++.+.
T Consensus         1 ~~~~~~~ilItGasg~iG~~l~~~l~~~g~~v~~~~r~~~~~~~~~~~~~~~~~-~~~~~~~D~~~~~~~~~~~~~~~~~   79 (246)
T PRK05653          1 MSLQGKTALVTGASRGIGRAIALRLAADGAKVVIYDSNEEAAEALAAELRAAGG-EARVLVFDVSDEAAVRALIEAAVEA   79 (246)
T ss_pred             CCCCCCEEEEECCCcHHHHHHHHHHHHCCCEEEEEeCChhHHHHHHHHHHhcCC-ceEEEEccCCCHHHHHHHHHHHHHH
Confidence            367889999999999999999999999999999999998887777776665543 7889999999999999999999888


Q ss_pred             cCCccEEEEccccCCcccccccCChHHHHHHHHhhhHHHHHHHHHHhhhhhhcC-CeEEEEcCccccccCCCCccchHHH
Q 044010          123 FGRLDHLVNNAGISSVALFEDIVNITDFKQIMNINFWGSVYTTRFAVPHLRYTK-GKIVVLSSAASWLTAPRMSFYNASK  201 (248)
Q Consensus       123 ~g~id~vv~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~-g~iV~isS~~~~~~~~~~~~Y~~sK  201 (248)
                      ++++|++||++|.....+..+ .+.+++++.++.|+.+++.+++.+.+.+.+.+ +++|++||..+..+.++...|+.+|
T Consensus        80 ~~~id~vi~~ag~~~~~~~~~-~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~~~ii~~ss~~~~~~~~~~~~y~~sk  158 (246)
T PRK05653         80 FGALDILVNNAGITRDALLPR-MSEEDWDRVIDVNLTGTFNVVRAALPPMIKARYGRIVNISSVSGVTGNPGQTNYSAAK  158 (246)
T ss_pred             hCCCCEEEECCCcCCCCChhh-CCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcCCcEEEEECcHHhccCCCCCcHhHhHH
Confidence            899999999999876654444 46789999999999999999999999986554 7999999998888888889999999


Q ss_pred             HHHHHHHHHHHHHhCC-CeEEEEEecCccccCcccc
Q 044010          202 AALVLFFETLRVELGS-DVGVTIVTPGFIESELTQG  236 (248)
Q Consensus       202 aal~~l~~~la~~~~~-~i~v~~v~pg~v~T~~~~~  236 (248)
                      ++++.+++++++++.+ ++++++++||.+.|++...
T Consensus       159 ~~~~~~~~~l~~~~~~~~i~~~~i~pg~~~~~~~~~  194 (246)
T PRK05653        159 AGVIGFTKALALELASRGITVNAVAPGFIDTDMTEG  194 (246)
T ss_pred             HHHHHHHHHHHHHHhhcCeEEEEEEeCCcCCcchhh
Confidence            9999999999999876 5999999999999998763

>PRK07577 short chain dehydrogenase; Provisional

Probab=99.97  E-value=3.4e-29  Score=207.83  Aligned_cols=177  Identities=26%  Similarity=0.379  Sum_probs=154.2

Q ss_pred             CCCCEEEEcCCCChHHHHHHHHHHHcCCeEEEEeCCcchHHHHHHHHHhhCCCcEEEEEccCCCHHHHHHHHHHHHhHcC
Q 044010           45 VSGKVVIITGASSGIGEHLAYEYARRGACLALCARREKSLEEVADTAREIGSPDVITIRADVSKVDDCRSLVEETMNHFG  124 (248)
Q Consensus        45 ~~~k~~lVtGg~~gIG~aia~~l~~~G~~V~l~~r~~~~~~~~~~~l~~~~~~~v~~~~~D~~~~~~~~~~~~~~~~~~g  124 (248)
                      |++|+++||||+++||.+++++|+++|++|++++|+.++      .   .   ...++.+|++|.++++++++++.+.+ 
T Consensus         1 ~~~k~vlItG~s~~iG~~ia~~l~~~G~~v~~~~r~~~~------~---~---~~~~~~~D~~~~~~~~~~~~~~~~~~-   67 (234)
T PRK07577          1 MSSRTVLVTGATKGIGLALSLRLANLGHQVIGIARSAID------D---F---PGELFACDLADIEQTAATLAQINEIH-   67 (234)
T ss_pred             CCCCEEEEECCCCcHHHHHHHHHHHCCCEEEEEeCCccc------c---c---CceEEEeeCCCHHHHHHHHHHHHHhC-
Confidence            468999999999999999999999999999999998753      0   0   12468899999999999999998876 


Q ss_pred             CccEEEEccccCCcccccccCChHHHHHHHHhhhHHHHHHHHHHhhhhhhc-CCeEEEEcCccccccCCCCccchHHHHH
Q 044010          125 RLDHLVNNAGISSVALFEDIVNITDFKQIMNINFWGSVYTTRFAVPHLRYT-KGKIVVLSSAASWLTAPRMSFYNASKAA  203 (248)
Q Consensus       125 ~id~vv~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~-~g~iV~isS~~~~~~~~~~~~Y~~sKaa  203 (248)
                      ++|++|||+|...+.++.+ .+.+++++.+++|+.+++.+.+.+.|.|++. .++||++||... .+.+...+|++||++
T Consensus        68 ~~d~vi~~ag~~~~~~~~~-~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~iv~~sS~~~-~~~~~~~~Y~~sK~a  145 (234)
T PRK07577         68 PVDAIVNNVGIALPQPLGK-IDLAALQDVYDLNVRAAVQVTQAFLEGMKLREQGRIVNICSRAI-FGALDRTSYSAAKSA  145 (234)
T ss_pred             CCcEEEECCCCCCCCChHH-CCHHHHHHHHHHHhHHHHHHHHHHHHHHHHcCCcEEEEEccccc-cCCCCchHHHHHHHH
Confidence            6899999999877665554 4679999999999999999999999998754 489999999864 466778899999999


Q ss_pred             HHHHHHHHHHHhCC-CeEEEEEecCccccCcccc
Q 044010          204 LVLFFETLRVELGS-DVGVTIVTPGFIESELTQG  236 (248)
Q Consensus       204 l~~l~~~la~~~~~-~i~v~~v~pg~v~T~~~~~  236 (248)
                      +++++++++.++.+ +|++++|+||+++|++...
T Consensus       146 ~~~~~~~~a~e~~~~gi~v~~i~pg~~~t~~~~~  179 (234)
T PRK07577        146 LVGCTRTWALELAEYGITVNAVAPGPIETELFRQ  179 (234)
T ss_pred             HHHHHHHHHHHHHhhCcEEEEEecCcccCccccc
Confidence            99999999999976 5999999999999998754

>PRK07023 short chain dehydrogenase; Provisional

Probab=99.97  E-value=2.7e-29  Score=209.98  Aligned_cols=181  Identities=19%  Similarity=0.246  Sum_probs=153.8

Q ss_pred             CEEEEcCCCChHHHHHHHHHHHcCCeEEEEeCCcchHHHHHHHHHhhCCCcEEEEEccCCCHHHHHHHHHH-HHhHc---
Q 044010           48 KVVIITGASSGIGEHLAYEYARRGACLALCARREKSLEEVADTAREIGSPDVITIRADVSKVDDCRSLVEE-TMNHF---  123 (248)
Q Consensus        48 k~~lVtGg~~gIG~aia~~l~~~G~~V~l~~r~~~~~~~~~~~l~~~~~~~v~~~~~D~~~~~~~~~~~~~-~~~~~---  123 (248)
                      ++++||||++|||.+++++|+++|++|++++|+.++.  .    ....+.++.++.+|+++.+++++++++ +.+.+   
T Consensus         2 ~~vlItGasggiG~~ia~~l~~~G~~v~~~~r~~~~~--~----~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~~~   75 (243)
T PRK07023          2 VRAIVTGHSRGLGAALAEQLLQPGIAVLGVARSRHPS--L----AAAAGERLAEVELDLSDAAAAAAWLAGDLLAAFVDG   75 (243)
T ss_pred             ceEEEecCCcchHHHHHHHHHhCCCEEEEEecCcchh--h----hhccCCeEEEEEeccCCHHHHHHHHHHHHHHHhccC
Confidence            3799999999999999999999999999999986531  1    112234788999999999999998877 55554   


Q ss_pred             CCccEEEEccccCCcccccccCChHHHHHHHHhhhHHHHHHHHHHhhhhhhc-CCeEEEEcCccccccCCCCccchHHHH
Q 044010          124 GRLDHLVNNAGISSVALFEDIVNITDFKQIMNINFWGSVYTTRFAVPHLRYT-KGKIVVLSSAASWLTAPRMSFYNASKA  202 (248)
Q Consensus       124 g~id~vv~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~-~g~iV~isS~~~~~~~~~~~~Y~~sKa  202 (248)
                      +++|++|||+|...+.......+.+++++.+++|+.+++.+.+.+.+.|.+. .++||++||..+..+.+++..|+++|+
T Consensus        76 ~~~~~~v~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~iv~isS~~~~~~~~~~~~Y~~sK~  155 (243)
T PRK07023         76 ASRVLLINNAGTVEPIGPLATLDAAAIARAVGLNVAAPLMLTAALAQAASDAAERRILHISSGAARNAYAGWSVYCATKA  155 (243)
T ss_pred             CCceEEEEcCcccCCCCccccCCHHHHHHHeeeeehHHHHHHHHHHHHhhccCCCEEEEEeChhhcCCCCCchHHHHHHH
Confidence            4799999999986543333335789999999999999999999999998754 489999999999999899999999999


Q ss_pred             HHHHHHHHHHHHhCC-CeEEEEEecCccccCccc
Q 044010          203 ALVLFFETLRVELGS-DVGVTIVTPGFIESELTQ  235 (248)
Q Consensus       203 al~~l~~~la~~~~~-~i~v~~v~pg~v~T~~~~  235 (248)
                      +++++++.++.+ ++ +|++++|+||+++|++..
T Consensus       156 a~~~~~~~~~~~-~~~~i~v~~v~pg~~~t~~~~  188 (243)
T PRK07023        156 ALDHHARAVALD-ANRALRIVSLAPGVVDTGMQA  188 (243)
T ss_pred             HHHHHHHHHHhc-CCCCcEEEEecCCccccHHHH
Confidence            999999999999 55 599999999999999864

>PRK12829 short chain dehydrogenase; Provisional

Probab=99.97  E-value=7.6e-29  Score=209.22  Aligned_cols=193  Identities=32%  Similarity=0.476  Sum_probs=165.3

Q ss_pred             cCCCCCEEEEcCCCChHHHHHHHHHHHcCCeEEEEeCCcchHHHHHHHHHhhCCCcEEEEEccCCCHHHHHHHHHHHHhH
Q 044010           43 EDVSGKVVIITGASSGIGEHLAYEYARRGACLALCARREKSLEEVADTAREIGSPDVITIRADVSKVDDCRSLVEETMNH  122 (248)
Q Consensus        43 ~~~~~k~~lVtGg~~gIG~aia~~l~~~G~~V~l~~r~~~~~~~~~~~l~~~~~~~v~~~~~D~~~~~~~~~~~~~~~~~  122 (248)
                      .++++|+++||||+++||++++++|+++|++|++++|+.+..++..++..+   .++.++.+|++|+++++++++++.+.
T Consensus         7 ~~~~~~~vlItGa~g~iG~~~a~~L~~~g~~V~~~~r~~~~~~~~~~~~~~---~~~~~~~~D~~~~~~~~~~~~~~~~~   83 (264)
T PRK12829          7 KPLDGLRVLVTGGASGIGRAIAEAFAEAGARVHVCDVSEAALAATAARLPG---AKVTATVADVADPAQVERVFDTAVER   83 (264)
T ss_pred             hccCCCEEEEeCCCCcHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHhc---CceEEEEccCCCHHHHHHHHHHHHHH
Confidence            468899999999999999999999999999999999987766655444432   25788999999999999999999999


Q ss_pred             cCCccEEEEccccCCcccccccCChHHHHHHHHhhhHHHHHHHHHHhhhhhhcC--CeEEEEcCccccccCCCCccchHH
Q 044010          123 FGRLDHLVNNAGISSVALFEDIVNITDFKQIMNINFWGSVYTTRFAVPHLRYTK--GKIVVLSSAASWLTAPRMSFYNAS  200 (248)
Q Consensus       123 ~g~id~vv~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~--g~iV~isS~~~~~~~~~~~~Y~~s  200 (248)
                      ++++|++||++|...+.......+.+++.+.+++|+.+++.+++.+.+.+.+.+  ++++++||..+..+.++...|+++
T Consensus        84 ~~~~d~vi~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~~~vv~~ss~~~~~~~~~~~~y~~~  163 (264)
T PRK12829         84 FGGLDVLVNNAGIAGPTGGIDEITPEQWEQTLAVNLNGQFYFARAAVPLLKASGHGGVIIALSSVAGRLGYPGRTPYAAS  163 (264)
T ss_pred             hCCCCEEEECCCCCCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhCCCCeEEEEecccccccCCCCCchhHHH
Confidence            999999999999873332222246789999999999999999999999876432  678999998888888888899999


Q ss_pred             HHHHHHHHHHHHHHhCC-CeEEEEEecCccccCcccccc
Q 044010          201 KAALVLFFETLRVELGS-DVGVTIVTPGFIESELTQGKF  238 (248)
Q Consensus       201 Kaal~~l~~~la~~~~~-~i~v~~v~pg~v~T~~~~~~~  238 (248)
                      |++++.+++.++.+++. +++++++.||.+.|++.+..+
T Consensus       164 K~a~~~~~~~l~~~~~~~~i~~~~l~pg~v~~~~~~~~~  202 (264)
T PRK12829        164 KWAVVGLVKSLAIELGPLGIRVNAILPGIVRGPRMRRVI  202 (264)
T ss_pred             HHHHHHHHHHHHHHHhhcCeEEEEEecCCcCChHHHHHh
Confidence            99999999999999865 599999999999999876543

>PRK09291 short chain dehydrogenase; Provisional

Probab=99.97  E-value=7.2e-29  Score=208.70  Aligned_cols=181  Identities=28%  Similarity=0.369  Sum_probs=157.4

Q ss_pred             CCEEEEcCCCChHHHHHHHHHHHcCCeEEEEeCCcchHHHHHHHHHhhCCCcEEEEEccCCCHHHHHHHHHHHHhHcCCc
Q 044010           47 GKVVIITGASSGIGEHLAYEYARRGACLALCARREKSLEEVADTAREIGSPDVITIRADVSKVDDCRSLVEETMNHFGRL  126 (248)
Q Consensus        47 ~k~~lVtGg~~gIG~aia~~l~~~G~~V~l~~r~~~~~~~~~~~l~~~~~~~v~~~~~D~~~~~~~~~~~~~~~~~~g~i  126 (248)
                      +|++|||||+||||.+++++|+++|++|++++|+.+..++..+..++.+. ++.++.+|++|.+++.++++      +++
T Consensus         2 ~~~vlVtGasg~iG~~ia~~l~~~G~~v~~~~r~~~~~~~~~~~~~~~~~-~~~~~~~D~~~~~~~~~~~~------~~i   74 (257)
T PRK09291          2 SKTILITGAGSGFGREVALRLARKGHNVIAGVQIAPQVTALRAEAARRGL-ALRVEKLDLTDAIDRAQAAE------WDV   74 (257)
T ss_pred             CCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcCC-cceEEEeeCCCHHHHHHHhc------CCC
Confidence            57999999999999999999999999999999988766666655554443 68889999999998877654      379


Q ss_pred             cEEEEccccCCcccccccCChHHHHHHHHhhhHHHHHHHHHHhhhhhhcC-CeEEEEcCccccccCCCCccchHHHHHHH
Q 044010          127 DHLVNNAGISSVALFEDIVNITDFKQIMNINFWGSVYTTRFAVPHLRYTK-GKIVVLSSAASWLTAPRMSFYNASKAALV  205 (248)
Q Consensus       127 d~vv~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~-g~iV~isS~~~~~~~~~~~~Y~~sKaal~  205 (248)
                      |++|||||.....+..+ .+.++++..+++|+.+++.+.+.+++.+.+.+ ++||++||..+..+.++...|++||++++
T Consensus        75 d~vi~~ag~~~~~~~~~-~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~~iv~~SS~~~~~~~~~~~~Y~~sK~a~~  153 (257)
T PRK09291         75 DVLLNNAGIGEAGAVVD-IPVELVRELFETNVFGPLELTQGFVRKMVARGKGKVVFTSSMAGLITGPFTGAYCASKHALE  153 (257)
T ss_pred             CEEEECCCcCCCcCccc-CCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcCCceEEEEcChhhccCCCCcchhHHHHHHHH
Confidence            99999999876665555 57799999999999999999999999986543 89999999998888888899999999999


Q ss_pred             HHHHHHHHHhCC-CeEEEEEecCccccCccc
Q 044010          206 LFFETLRVELGS-DVGVTIVTPGFIESELTQ  235 (248)
Q Consensus       206 ~l~~~la~~~~~-~i~v~~v~pg~v~T~~~~  235 (248)
                      ++++.++.++.+ +|++++|+||++.|++..
T Consensus       154 ~~~~~l~~~~~~~gi~~~~v~pg~~~t~~~~  184 (257)
T PRK09291        154 AIAEAMHAELKPFGIQVATVNPGPYLTGFND  184 (257)
T ss_pred             HHHHHHHHHHHhcCcEEEEEecCcccccchh
Confidence            999999999876 599999999999998864

>TIGR01963 PHB_DH 3-hydroxybutyrate dehydrogenase

Probab=99.97  E-value=1e-28  Score=207.22  Aligned_cols=188  Identities=34%  Similarity=0.521  Sum_probs=166.2

Q ss_pred             CCEEEEcCCCChHHHHHHHHHHHcCCeEEEEeCCcchHHHHHHHHHhhCCCcEEEEEccCCCHHHHHHHHHHHHhHcCCc
Q 044010           47 GKVVIITGASSGIGEHLAYEYARRGACLALCARREKSLEEVADTAREIGSPDVITIRADVSKVDDCRSLVEETMNHFGRL  126 (248)
Q Consensus        47 ~k~~lVtGg~~gIG~aia~~l~~~G~~V~l~~r~~~~~~~~~~~l~~~~~~~v~~~~~D~~~~~~~~~~~~~~~~~~g~i  126 (248)
                      +|++|||||+++||.+++++|+++|++|++++|+.++.+...+++...+ .++..+.+|++|.++++++++++.+.++++
T Consensus         1 ~~~vlItGa~g~lG~~l~~~l~~~g~~v~~~~r~~~~~~~~~~~~~~~~-~~~~~~~~D~~~~~~~~~~~~~~~~~~~~~   79 (255)
T TIGR01963         1 GKTALVTGAASGIGLAIALALAAAGANVVVNDLGEAGAEAAAKVATDAG-GSVIYLVADVTKEDEIADMIAAAAAEFGGL   79 (255)
T ss_pred             CCEEEEcCCcchHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcC-CceEEEECCCCCHHHHHHHHHHHHHhcCCC
Confidence            5789999999999999999999999999999999877777776665544 378899999999999999999999989999


Q ss_pred             cEEEEccccCCcccccccCChHHHHHHHHhhhHHHHHHHHHHhhhhhhcC-CeEEEEcCccccccCCCCccchHHHHHHH
Q 044010          127 DHLVNNAGISSVALFEDIVNITDFKQIMNINFWGSVYTTRFAVPHLRYTK-GKIVVLSSAASWLTAPRMSFYNASKAALV  205 (248)
Q Consensus       127 d~vv~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~-g~iV~isS~~~~~~~~~~~~Y~~sKaal~  205 (248)
                      |++||++|........+ .+.+++++.+..|+.+++.+++.+.+.|++.+ +++|++||..+..+.+....|+++|++++
T Consensus        80 d~vi~~a~~~~~~~~~~-~~~~~~~~~~~~n~~g~~~~~~~~~~~~~~~~~~~~v~~ss~~~~~~~~~~~~y~~sk~a~~  158 (255)
T TIGR01963        80 DILVNNAGIQHVAPIEE-FPPEDWDRIIAIMLTSAFHTIRAALPHMKKQGWGRIINIASAHGLVASPFKSAYVAAKHGLI  158 (255)
T ss_pred             CEEEECCCCCCCCCccc-CCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcCCeEEEEEcchhhcCCCCCCchhHHHHHHHH
Confidence            99999999876554444 36788999999999999999999999987554 79999999988888888899999999999


Q ss_pred             HHHHHHHHHhCC-CeEEEEEecCccccCcccc
Q 044010          206 LFFETLRVELGS-DVGVTIVTPGFIESELTQG  236 (248)
Q Consensus       206 ~l~~~la~~~~~-~i~v~~v~pg~v~T~~~~~  236 (248)
                      ++++.++.++.+ +++++.++||.+.|++...
T Consensus       159 ~~~~~~~~~~~~~~i~v~~i~pg~v~~~~~~~  190 (255)
T TIGR01963       159 GLTKVLALEVAAHGITVNAICPGYVRTPLVEK  190 (255)
T ss_pred             HHHHHHHHHhhhcCeEEEEEecCccccHHHHH
Confidence            999999999876 5999999999999987544

This model represents a subfamily of the short chain dehydrogenases. Characterized members so far as 3-hydroxybutyrate dehydrogenases and are found in species that accumulate ester polmers called polyhydroxyalkanoic acids (PHAs) under certain conditions. Several members of the family are from species not known to accumulate PHAs, including Oceanobacillus iheyensis and Bacillus subtilis. However, polymer formation is not required for there be a role for 3-hydroxybutyrate dehydrogenase; it may be members of this family have the same function in those species.

>PRK12825 fabG 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional

Probab=99.97  E-value=2.7e-28  Score=203.41  Aligned_cols=193  Identities=31%  Similarity=0.516  Sum_probs=165.8

Q ss_pred             CCCCCEEEEcCCCChHHHHHHHHHHHcCCeEEEEeCCcc-hHHHHHHHHHhhCCCcEEEEEccCCCHHHHHHHHHHHHhH
Q 044010           44 DVSGKVVIITGASSGIGEHLAYEYARRGACLALCARREK-SLEEVADTAREIGSPDVITIRADVSKVDDCRSLVEETMNH  122 (248)
Q Consensus        44 ~~~~k~~lVtGg~~gIG~aia~~l~~~G~~V~l~~r~~~-~~~~~~~~l~~~~~~~v~~~~~D~~~~~~~~~~~~~~~~~  122 (248)
                      +++.|++|||||+|+||.+++++|+++|++|++..|+.+ ..+...+.+++.+ .++.++.+|++|.++++++++++.+.
T Consensus         3 ~~~~~~vlItGasg~iG~~l~~~l~~~g~~v~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~D~~~~~~v~~~~~~~~~~   81 (249)
T PRK12825          3 SLMGRVALVTGAARGLGRAIALRLARAGADVVVHYRSDEEAAEELVEAVEALG-RRAQAVQADVTDKAALEAAVAAAVER   81 (249)
T ss_pred             CCCCCEEEEeCCCchHHHHHHHHHHHCCCeEEEEeCCCHHHHHHHHHHHHhcC-CceEEEECCcCCHHHHHHHHHHHHHH
Confidence            567789999999999999999999999999887666544 3344444444443 36889999999999999999999888


Q ss_pred             cCCccEEEEccccCCcccccccCChHHHHHHHHhhhHHHHHHHHHHhhhhhhcC-CeEEEEcCccccccCCCCccchHHH
Q 044010          123 FGRLDHLVNNAGISSVALFEDIVNITDFKQIMNINFWGSVYTTRFAVPHLRYTK-GKIVVLSSAASWLTAPRMSFYNASK  201 (248)
Q Consensus       123 ~g~id~vv~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~-g~iV~isS~~~~~~~~~~~~Y~~sK  201 (248)
                      ++++|++||++|...+....+ .+.+++++.+++|+.+++.+++.+.+.+.+.+ +++|++||..+..+.++...|+.+|
T Consensus        82 ~~~id~vi~~ag~~~~~~~~~-~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~i~~SS~~~~~~~~~~~~y~~sK  160 (249)
T PRK12825         82 FGRIDILVNNAGIFEDKPLAD-MSDDEWDEVIDVNLSGVFHLLRAVVPPMRKQRGGRIVNISSVAGLPGWPGRSNYAAAK  160 (249)
T ss_pred             cCCCCEEEECCccCCCCChhh-CCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcCCCEEEEECccccCCCCCCchHHHHHH
Confidence            899999999999776655544 46789999999999999999999999887544 7999999999988888888999999


Q ss_pred             HHHHHHHHHHHHHhCC-CeEEEEEecCccccCcccccc
Q 044010          202 AALVLFFETLRVELGS-DVGVTIVTPGFIESELTQGKF  238 (248)
Q Consensus       202 aal~~l~~~la~~~~~-~i~v~~v~pg~v~T~~~~~~~  238 (248)
                      ++++++++.+++++.+ ++++++++||.+.|++.....
T Consensus       161 ~~~~~~~~~~~~~~~~~~i~~~~i~pg~~~~~~~~~~~  198 (249)
T PRK12825        161 AGLVGLTKALARELAEYGITVNMVAPGDIDTDMKEATI  198 (249)
T ss_pred             HHHHHHHHHHHHHHhhcCeEEEEEEECCccCCcccccc
Confidence            9999999999999876 599999999999999976654

>PRK07041 short chain dehydrogenase; Provisional

Probab=99.97  E-value=4.7e-29  Score=206.64  Aligned_cols=175  Identities=25%  Similarity=0.377  Sum_probs=152.1

Q ss_pred             EEcCCCChHHHHHHHHHHHcCCeEEEEeCCcchHHHHHHHHHhhCCCcEEEEEccCCCHHHHHHHHHHHHhHcCCccEEE
Q 044010           51 IITGASSGIGEHLAYEYARRGACLALCARREKSLEEVADTAREIGSPDVITIRADVSKVDDCRSLVEETMNHFGRLDHLV  130 (248)
Q Consensus        51 lVtGg~~gIG~aia~~l~~~G~~V~l~~r~~~~~~~~~~~l~~~~~~~v~~~~~D~~~~~~~~~~~~~~~~~~g~id~vv  130 (248)
                      +||||++|||++++++|+++|++|++++|+.++.++..+++++  +.++.++.+|++|.+++++++++    .+++|++|
T Consensus         1 lItGas~~iG~~~a~~l~~~G~~v~~~~r~~~~~~~~~~~~~~--~~~~~~~~~Dl~~~~~~~~~~~~----~~~id~li   74 (230)
T PRK07041          1 LVVGGSSGIGLALARAFAAEGARVTIASRSRDRLAAAARALGG--GAPVRTAALDITDEAAVDAFFAE----AGPFDHVV   74 (230)
T ss_pred             CeecCCChHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHhc--CCceEEEEccCCCHHHHHHHHHh----cCCCCEEE
Confidence            6999999999999999999999999999998776666665542  23688899999999999998875    47899999


Q ss_pred             EccccCCcccccccCChHHHHHHHHhhhHHHHHHHHHHhhhhhhcCCeEEEEcCccccccCCCCccchHHHHHHHHHHHH
Q 044010          131 NNAGISSVALFEDIVNITDFKQIMNINFWGSVYTTRFAVPHLRYTKGKIVVLSSAASWLTAPRMSFYNASKAALVLFFET  210 (248)
Q Consensus       131 ~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~g~iV~isS~~~~~~~~~~~~Y~~sKaal~~l~~~  210 (248)
                      ||+|.....++.+ .+.+++++.+++|+.+++.+++  .+.+. +.|+||++||.++..+.++...|++||+++++++++
T Consensus        75 ~~ag~~~~~~~~~-~~~~~~~~~~~~n~~~~~~l~~--~~~~~-~~g~iv~~ss~~~~~~~~~~~~Y~~sK~a~~~~~~~  150 (230)
T PRK07041         75 ITAADTPGGPVRA-LPLAAAQAAMDSKFWGAYRVAR--AARIA-PGGSLTFVSGFAAVRPSASGVLQGAINAALEALARG  150 (230)
T ss_pred             ECCCCCCCCChhh-CCHHHHHHHHHHHHHHHHHHHh--hhhhc-CCeEEEEECchhhcCCCCcchHHHHHHHHHHHHHHH
Confidence            9999876655544 4779999999999999999999  34443 468999999999998888899999999999999999


Q ss_pred             HHHHhCCCeEEEEEecCccccCcccc
Q 044010          211 LRVELGSDVGVTIVTPGFIESELTQG  236 (248)
Q Consensus       211 la~~~~~~i~v~~v~pg~v~T~~~~~  236 (248)
                      ++.|+.+ +||++++||+++|++...
T Consensus       151 la~e~~~-irv~~i~pg~~~t~~~~~  175 (230)
T PRK07041        151 LALELAP-VRVNTVSPGLVDTPLWSK  175 (230)
T ss_pred             HHHHhhC-ceEEEEeecccccHHHHh
Confidence            9999975 999999999999998654

>PRK08261 fabG 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional

Probab=99.97  E-value=6.7e-29  Score=225.46  Aligned_cols=189  Identities=26%  Similarity=0.381  Sum_probs=161.1

Q ss_pred             CCCCCEEEEcCCCChHHHHHHHHHHHcCCeEEEEeCCcchHHHHHHHHHhhCCCcEEEEEccCCCHHHHHHHHHHHHhHc
Q 044010           44 DVSGKVVIITGASSGIGEHLAYEYARRGACLALCARREKSLEEVADTAREIGSPDVITIRADVSKVDDCRSLVEETMNHF  123 (248)
Q Consensus        44 ~~~~k~~lVtGg~~gIG~aia~~l~~~G~~V~l~~r~~~~~~~~~~~l~~~~~~~v~~~~~D~~~~~~~~~~~~~~~~~~  123 (248)
                      .++||+++||||++|||.+++++|+++|++|++++|.... ++..+...+.   ....+.+|++|.++++++++++.+++
T Consensus       207 ~~~g~~vlItGasggIG~~la~~l~~~Ga~vi~~~~~~~~-~~l~~~~~~~---~~~~~~~Dv~~~~~~~~~~~~~~~~~  282 (450)
T PRK08261        207 PLAGKVALVTGAARGIGAAIAEVLARDGAHVVCLDVPAAG-EALAAVANRV---GGTALALDITAPDAPARIAEHLAERH  282 (450)
T ss_pred             CCCCCEEEEecCCCHHHHHHHHHHHHCCCEEEEEeCCccH-HHHHHHHHHc---CCeEEEEeCCCHHHHHHHHHHHHHhC
Confidence            4679999999999999999999999999999999885321 2222222222   23578899999999999999999999


Q ss_pred             CCccEEEEccccCCcccccccCChHHHHHHHHhhhHHHHHHHHHHhhhhh-hcCCeEEEEcCccccccCCCCccchHHHH
Q 044010          124 GRLDHLVNNAGISSVALFEDIVNITDFKQIMNINFWGSVYTTRFAVPHLR-YTKGKIVVLSSAASWLTAPRMSFYNASKA  202 (248)
Q Consensus       124 g~id~vv~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~-~~~g~iV~isS~~~~~~~~~~~~Y~~sKa  202 (248)
                      +++|++|||||......+.+ .+.++|+..+++|+.+++.+.+.+.+.+. +.+++||++||..+..+.++...|+++|+
T Consensus       283 g~id~vi~~AG~~~~~~~~~-~~~~~~~~~~~~n~~g~~~l~~~~~~~~~~~~~g~iv~~SS~~~~~g~~~~~~Y~asKa  361 (450)
T PRK08261        283 GGLDIVVHNAGITRDKTLAN-MDEARWDSVLAVNLLAPLRITEALLAAGALGDGGRIVGVSSISGIAGNRGQTNYAASKA  361 (450)
T ss_pred             CCCCEEEECCCcCCCCChhh-CCHHHHHHHHHHHhHHHHHHHHHHHHhhhhcCCCEEEEECChhhcCCCCCChHHHHHHH
Confidence            99999999999876655554 57799999999999999999999999543 34589999999999988889999999999


Q ss_pred             HHHHHHHHHHHHhCC-CeEEEEEecCccccCccccc
Q 044010          203 ALVLFFETLRVELGS-DVGVTIVTPGFIESELTQGK  237 (248)
Q Consensus       203 al~~l~~~la~~~~~-~i~v~~v~pg~v~T~~~~~~  237 (248)
                      ++++++++++.++++ +|++|+|+||.++|+|+...
T Consensus       362 al~~~~~~la~el~~~gi~v~~v~PG~i~t~~~~~~  397 (450)
T PRK08261        362 GVIGLVQALAPLLAERGITINAVAPGFIETQMTAAI  397 (450)
T ss_pred             HHHHHHHHHHHHHhhhCcEEEEEEeCcCcchhhhcc
Confidence            999999999999977 59999999999999987653

>PRK07806 short chain dehydrogenase; Provisional

Probab=99.97  E-value=4.4e-29  Score=209.03  Aligned_cols=184  Identities=27%  Similarity=0.334  Sum_probs=153.7

Q ss_pred             CCCCCEEEEcCCCChHHHHHHHHHHHcCCeEEEEeCCcc-hHHHHHHHHHhhCCCcEEEEEccCCCHHHHHHHHHHHHhH
Q 044010           44 DVSGKVVIITGASSGIGEHLAYEYARRGACLALCARREK-SLEEVADTAREIGSPDVITIRADVSKVDDCRSLVEETMNH  122 (248)
Q Consensus        44 ~~~~k~~lVtGg~~gIG~aia~~l~~~G~~V~l~~r~~~-~~~~~~~~l~~~~~~~v~~~~~D~~~~~~~~~~~~~~~~~  122 (248)
                      ++++|+++||||++|||.+++++|+++|++|++.+|+.+ ..+...++++..+ .++.++.+|++|.+++.++++++.++
T Consensus         3 ~~~~k~vlItGasggiG~~l~~~l~~~G~~V~~~~r~~~~~~~~~~~~l~~~~-~~~~~~~~D~~~~~~~~~~~~~~~~~   81 (248)
T PRK07806          3 DLPGKTALVTGSSRGIGADTAKILAGAGAHVVVNYRQKAPRANKVVAEIEAAG-GRASAVGADLTDEESVAALMDTAREE   81 (248)
T ss_pred             CCCCcEEEEECCCCcHHHHHHHHHHHCCCEEEEEeCCchHhHHHHHHHHHhcC-CceEEEEcCCCCHHHHHHHHHHHHHh
Confidence            578999999999999999999999999999999999753 4555555665543 36888999999999999999999999


Q ss_pred             cCCccEEEEccccCCcccccccCChHHHHHHHHhhhHHHHHHHHHHhhhhhhcCCeEEEEcCcccc-----ccCCCCccc
Q 044010          123 FGRLDHLVNNAGISSVALFEDIVNITDFKQIMNINFWGSVYTTRFAVPHLRYTKGKIVVLSSAASW-----LTAPRMSFY  197 (248)
Q Consensus       123 ~g~id~vv~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~g~iV~isS~~~~-----~~~~~~~~Y  197 (248)
                      ++++|++|||||.....       ..+++..+++|+.+++++++.+.|.|. .++++|++||..+.     .+.+.+..|
T Consensus        82 ~~~~d~vi~~ag~~~~~-------~~~~~~~~~vn~~~~~~l~~~~~~~~~-~~~~iv~isS~~~~~~~~~~~~~~~~~Y  153 (248)
T PRK07806         82 FGGLDALVLNASGGMES-------GMDEDYAMRLNRDAQRNLARAALPLMP-AGSRVVFVTSHQAHFIPTVKTMPEYEPV  153 (248)
T ss_pred             CCCCcEEEECCCCCCCC-------CCCcceeeEeeeHHHHHHHHHHHhhcc-CCceEEEEeCchhhcCccccCCccccHH
Confidence            99999999999864321       123457889999999999999999885 45799999986543     233456789


Q ss_pred             hHHHHHHHHHHHHHHHHhCC-CeEEEEEecCccccCcccc
Q 044010          198 NASKAALVLFFETLRVELGS-DVGVTIVTPGFIESELTQG  236 (248)
Q Consensus       198 ~~sKaal~~l~~~la~~~~~-~i~v~~v~pg~v~T~~~~~  236 (248)
                      ++||++++.+++.++.++++ +|||++|+||.+.|++...
T Consensus       154 ~~sK~a~e~~~~~l~~~~~~~~i~v~~v~pg~~~~~~~~~  193 (248)
T PRK07806        154 ARSKRAGEDALRALRPELAEKGIGFVVVSGDMIEGTVTAT  193 (248)
T ss_pred             HHHHHHHHHHHHHHHHHhhccCeEEEEeCCccccCchhhh
Confidence            99999999999999999987 4999999999999987653

>KOG1199 consensus Short-chain alcohol dehydrogenase/3-hydroxyacyl-CoA dehydrogenase [Secondary metabolites biosynthesis, transport and catabolism]

Probab=99.97  E-value=9.3e-31  Score=201.07  Aligned_cols=192  Identities=28%  Similarity=0.426  Sum_probs=170.0

Q ss_pred             CCCCCEEEEcCCCChHHHHHHHHHHHcCCeEEEEeCCcchHHHHHHHHHhhCCCcEEEEEccCCCHHHHHHHHHHHHhHc
Q 044010           44 DVSGKVVIITGASSGIGEHLAYEYARRGACLALCARREKSLEEVADTAREIGSPDVITIRADVSKVDDCRSLVEETMNHF  123 (248)
Q Consensus        44 ~~~~k~~lVtGg~~gIG~aia~~l~~~G~~V~l~~r~~~~~~~~~~~l~~~~~~~v~~~~~D~~~~~~~~~~~~~~~~~~  123 (248)
                      ..+|-+++||||.+|+|++.+++|+++|+.|++.+-...+.++..+++   + .++.+...|+++++++..++...+.+|
T Consensus         6 s~kglvalvtggasglg~ataerlakqgasv~lldlp~skg~~vakel---g-~~~vf~padvtsekdv~aala~ak~kf   81 (260)
T KOG1199|consen    6 STKGLVALVTGGASGLGKATAERLAKQGASVALLDLPQSKGADVAKEL---G-GKVVFTPADVTSEKDVRAALAKAKAKF   81 (260)
T ss_pred             hhcCeeEEeecCcccccHHHHHHHHhcCceEEEEeCCcccchHHHHHh---C-CceEEeccccCcHHHHHHHHHHHHhhc
Confidence            467889999999999999999999999999999999888888877776   3 388999999999999999999999999


Q ss_pred             CCccEEEEccccCCcccc-----cccCChHHHHHHHHhhhHHHHHHHHHHhhhhhhc-------CCeEEEEcCccccccC
Q 044010          124 GRLDHLVNNAGISSVALF-----EDIVNITDFKQIMNINFWGSVYTTRFAVPHLRYT-------KGKIVVLSSAASWLTA  191 (248)
Q Consensus       124 g~id~vv~~ag~~~~~~~-----~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~-------~g~iV~isS~~~~~~~  191 (248)
                      |++|.+|||||.....+.     ....+.|++++.+++|+.|+|+++++-...|-+.       .|.||+..|.+++.+.
T Consensus        82 grld~~vncagia~a~ktyn~~k~~~h~ledfqrvidvn~~gtfnvirl~aglmg~nepdq~gqrgviintasvaafdgq  161 (260)
T KOG1199|consen   82 GRLDALVNCAGIAYAFKTYNVQKKKHHDLEDFQRVIDVNVLGTFNVIRLGAGLMGENEPDQNGQRGVIINTASVAAFDGQ  161 (260)
T ss_pred             cceeeeeeccceeeeeeeeeecccccccHHHhhheeeeeeeeeeeeeeehhhhhcCCCCCCCCcceEEEeeceeeeecCc
Confidence            999999999997643211     1114679999999999999999999988888431       3799999999999999


Q ss_pred             CCCccchHHHHHHHHHHHHHHHHhCCC-eEEEEEecCccccCccccccc
Q 044010          192 PRMSFYNASKAALVLFFETLRVELGSD-VGVTIVTPGFIESELTQGKFL  239 (248)
Q Consensus       192 ~~~~~Y~~sKaal~~l~~~la~~~~~~-i~v~~v~pg~v~T~~~~~~~~  239 (248)
                      .+.++|++||.++.+|+--+++++++. ||+++|.||..+||+....++
T Consensus       162 ~gqaaysaskgaivgmtlpiardla~~gir~~tiapglf~tpllsslpe  210 (260)
T KOG1199|consen  162 TGQAAYSASKGAIVGMTLPIARDLAGDGIRFNTIAPGLFDTPLLSSLPE  210 (260)
T ss_pred             cchhhhhcccCceEeeechhhhhcccCceEEEeecccccCChhhhhhhH
Confidence            999999999999999999999999875 999999999999999876543

>PRK08324 short chain dehydrogenase; Validated

Probab=99.97  E-value=1.4e-28  Score=233.33  Aligned_cols=192  Identities=30%  Similarity=0.448  Sum_probs=172.5

Q ss_pred             cCCCCCEEEEcCCCChHHHHHHHHHHHcCCeEEEEeCCcchHHHHHHHHHhhCCCcEEEEEccCCCHHHHHHHHHHHHhH
Q 044010           43 EDVSGKVVIITGASSGIGEHLAYEYARRGACLALCARREKSLEEVADTAREIGSPDVITIRADVSKVDDCRSLVEETMNH  122 (248)
Q Consensus        43 ~~~~~k~~lVtGg~~gIG~aia~~l~~~G~~V~l~~r~~~~~~~~~~~l~~~~~~~v~~~~~D~~~~~~~~~~~~~~~~~  122 (248)
                      ..++||+++||||+||||++++++|+++|++|++++|+.++.+...+++...  .++.++.+|++|.++++++++++.+.
T Consensus       418 ~~l~gk~vLVTGasggIG~~la~~L~~~Ga~Vvl~~r~~~~~~~~~~~l~~~--~~v~~v~~Dvtd~~~v~~~~~~~~~~  495 (681)
T PRK08324        418 KPLAGKVALVTGAAGGIGKATAKRLAAEGACVVLADLDEEAAEAAAAELGGP--DRALGVACDVTDEAAVQAAFEEAALA  495 (681)
T ss_pred             cCCCCCEEEEecCCCHHHHHHHHHHHHCcCEEEEEeCCHHHHHHHHHHHhcc--CcEEEEEecCCCHHHHHHHHHHHHHH
Confidence            3578999999999999999999999999999999999988877777666544  36889999999999999999999999


Q ss_pred             cCCccEEEEccccCCcccccccCChHHHHHHHHhhhHHHHHHHHHHhhhhhhc--CCeEEEEcCccccccCCCCccchHH
Q 044010          123 FGRLDHLVNNAGISSVALFEDIVNITDFKQIMNINFWGSVYTTRFAVPHLRYT--KGKIVVLSSAASWLTAPRMSFYNAS  200 (248)
Q Consensus       123 ~g~id~vv~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~--~g~iV~isS~~~~~~~~~~~~Y~~s  200 (248)
                      +|++|++|||||.....+..+ .+.++|+..+++|+.+++.+++.+.+.|+++  +|+||++||..+..+.++..+|++|
T Consensus       496 ~g~iDvvI~~AG~~~~~~~~~-~~~~~~~~~~~~N~~g~~~l~~~~~~~l~~~~~~g~iV~vsS~~~~~~~~~~~~Y~as  574 (681)
T PRK08324        496 FGGVDIVVSNAGIAISGPIEE-TSDEDWRRSFDVNATGHFLVAREAVRIMKAQGLGGSIVFIASKNAVNPGPNFGAYGAA  574 (681)
T ss_pred             cCCCCEEEECCCCCCCCChhh-CCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcCCCcEEEEECCccccCCCCCcHHHHHH
Confidence            999999999999887666655 4789999999999999999999999998754  3899999999999888899999999


Q ss_pred             HHHHHHHHHHHHHHhCCC-eEEEEEecCcc--ccCccccc
Q 044010          201 KAALVLFFETLRVELGSD-VGVTIVTPGFI--ESELTQGK  237 (248)
Q Consensus       201 Kaal~~l~~~la~~~~~~-i~v~~v~pg~v--~T~~~~~~  237 (248)
                      |++++++++.++.++++. ||||+|+||.+  .|++..+.
T Consensus       575 Kaa~~~l~~~la~e~~~~gIrvn~v~Pg~v~~~t~~~~~~  614 (681)
T PRK08324        575 KAAELHLVRQLALELGPDGIRVNGVNPDAVVRGSGIWTGE  614 (681)
T ss_pred             HHHHHHHHHHHHHHhcccCeEEEEEeCceeecCCccccch
Confidence            999999999999999874 99999999999  89876543

>PRK08264 short chain dehydrogenase; Validated

Probab=99.97  E-value=2e-28  Score=203.91  Aligned_cols=182  Identities=32%  Similarity=0.485  Sum_probs=158.0

Q ss_pred             cCCCCCEEEEcCCCChHHHHHHHHHHHcCC-eEEEEeCCcchHHHHHHHHHhhCCCcEEEEEccCCCHHHHHHHHHHHHh
Q 044010           43 EDVSGKVVIITGASSGIGEHLAYEYARRGA-CLALCARREKSLEEVADTAREIGSPDVITIRADVSKVDDCRSLVEETMN  121 (248)
Q Consensus        43 ~~~~~k~~lVtGg~~gIG~aia~~l~~~G~-~V~l~~r~~~~~~~~~~~l~~~~~~~v~~~~~D~~~~~~~~~~~~~~~~  121 (248)
                      +++++|+++||||+|+||.++|++|+++|+ +|++++|+.++.++        .+.++.++.+|++|.++++++++.   
T Consensus         2 ~~~~~~~vlItGgsg~iG~~la~~l~~~G~~~V~~~~r~~~~~~~--------~~~~~~~~~~D~~~~~~~~~~~~~---   70 (238)
T PRK08264          2 MDIKGKVVLVTGANRGIGRAFVEQLLARGAAKVYAAARDPESVTD--------LGPRVVPLQLDVTDPASVAAAAEA---   70 (238)
T ss_pred             CCCCCCEEEEECCCchHHHHHHHHHHHCCcccEEEEecChhhhhh--------cCCceEEEEecCCCHHHHHHHHHh---
Confidence            467899999999999999999999999999 99999998765433        223688999999999999887764   


Q ss_pred             HcCCccEEEEcccc-CCcccccccCChHHHHHHHHhhhHHHHHHHHHHhhhhhhc-CCeEEEEcCccccccCCCCccchH
Q 044010          122 HFGRLDHLVNNAGI-SSVALFEDIVNITDFKQIMNINFWGSVYTTRFAVPHLRYT-KGKIVVLSSAASWLTAPRMSFYNA  199 (248)
Q Consensus       122 ~~g~id~vv~~ag~-~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~-~g~iV~isS~~~~~~~~~~~~Y~~  199 (248)
                       ++++|++||++|. .......+ .+.+++.+.+++|+.+++.+.+.+.+.+++. .+++|++||..+..+.++...|++
T Consensus        71 -~~~id~vi~~ag~~~~~~~~~~-~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~v~~sS~~~~~~~~~~~~y~~  148 (238)
T PRK08264         71 -ASDVTILVNNAGIFRTGSLLLE-GDEDALRAEMETNYFGPLAMARAFAPVLAANGGGAIVNVLSVLSWVNFPNLGTYSA  148 (238)
T ss_pred             -cCCCCEEEECCCcCCCCCcccc-CCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcCCCEEEEEcChhhccCCCCchHhHH
Confidence             4689999999998 44444444 5779999999999999999999999998654 489999999999888888899999


Q ss_pred             HHHHHHHHHHHHHHHhCC-CeEEEEEecCccccCccccc
Q 044010          200 SKAALVLFFETLRVELGS-DVGVTIVTPGFIESELTQGK  237 (248)
Q Consensus       200 sKaal~~l~~~la~~~~~-~i~v~~v~pg~v~T~~~~~~  237 (248)
                      +|++++++++.++.++.+ +++++++.||.++|++....
T Consensus       149 sK~a~~~~~~~l~~~~~~~~i~~~~v~pg~v~t~~~~~~  187 (238)
T PRK08264        149 SKAAAWSLTQALRAELAPQGTRVLGVHPGPIDTDMAAGL  187 (238)
T ss_pred             HHHHHHHHHHHHHHHhhhcCeEEEEEeCCcccccccccC
Confidence            999999999999999976 59999999999999986543

>PRK09009 C factor cell-cell signaling protein; Provisional

Probab=99.96  E-value=2.1e-28  Score=203.48  Aligned_cols=177  Identities=25%  Similarity=0.321  Sum_probs=143.4

Q ss_pred             CEEEEcCCCChHHHHHHHHHHHcC--CeEEEEeCCcchHHHHHHHHHhhCCCcEEEEEccCCCHHHHHHHHHHHHhHcCC
Q 044010           48 KVVIITGASSGIGEHLAYEYARRG--ACLALCARREKSLEEVADTAREIGSPDVITIRADVSKVDDCRSLVEETMNHFGR  125 (248)
Q Consensus        48 k~~lVtGg~~gIG~aia~~l~~~G--~~V~l~~r~~~~~~~~~~~l~~~~~~~v~~~~~D~~~~~~~~~~~~~~~~~~g~  125 (248)
                      ++++||||++|||++++++|+++|  ..|++..|+....         ....++.++++|+++.++++++.    +.+++
T Consensus         1 ~~vlItGas~gIG~~ia~~l~~~~~~~~v~~~~~~~~~~---------~~~~~~~~~~~Dls~~~~~~~~~----~~~~~   67 (235)
T PRK09009          1 MNILIVGGSGGIGKAMVKQLLERYPDATVHATYRHHKPD---------FQHDNVQWHALDVTDEAEIKQLS----EQFTQ   67 (235)
T ss_pred             CEEEEECCCChHHHHHHHHHHHhCCCCEEEEEccCCccc---------cccCceEEEEecCCCHHHHHHHH----HhcCC
Confidence            479999999999999999999985  5666666654321         11236788999999999988753    45689


Q ss_pred             ccEEEEccccCCcc-----cccccCChHHHHHHHHhhhHHHHHHHHHHhhhhhhcC-CeEEEEcCccccc---cCCCCcc
Q 044010          126 LDHLVNNAGISSVA-----LFEDIVNITDFKQIMNINFWGSVYTTRFAVPHLRYTK-GKIVVLSSAASWL---TAPRMSF  196 (248)
Q Consensus       126 id~vv~~ag~~~~~-----~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~-g~iV~isS~~~~~---~~~~~~~  196 (248)
                      +|++|||||.....     ...+..+.++|++.+++|+.+++.+++.+.|.|++.+ ++++++||..+..   +.+++..
T Consensus        68 id~li~~aG~~~~~~~~~~~~~~~~~~~~~~~~~~vn~~~~~~~~~~~~~~~~~~~~~~i~~iss~~~~~~~~~~~~~~~  147 (235)
T PRK09009         68 LDWLINCVGMLHTQDKGPEKSLQALDADFFLQNITLNTLPSLLLAKHFTPKLKQSESAKFAVISAKVGSISDNRLGGWYS  147 (235)
T ss_pred             CCEEEECCccccccccCcccccccCCHHHHHHHHHHHhHHHHHHHHHHHhhccccCCceEEEEeecccccccCCCCCcch
Confidence            99999999987432     1223357788999999999999999999999987554 7999998865532   3456779


Q ss_pred             chHHHHHHHHHHHHHHHHhCC---CeEEEEEecCccccCccccc
Q 044010          197 YNASKAALVLFFETLRVELGS---DVGVTIVTPGFIESELTQGK  237 (248)
Q Consensus       197 Y~~sKaal~~l~~~la~~~~~---~i~v~~v~pg~v~T~~~~~~  237 (248)
                      |+++|+++++|+++++.|+++   +|+||+|+||+++|+|.++.
T Consensus       148 Y~asK~a~~~~~~~la~e~~~~~~~i~v~~v~PG~v~t~~~~~~  191 (235)
T PRK09009        148 YRASKAALNMFLKTLSIEWQRSLKHGVVLALHPGTTDTALSKPF  191 (235)
T ss_pred             hhhhHHHHHHHHHHHHHHhhcccCCeEEEEEcccceecCCCcch
Confidence            999999999999999999965   59999999999999997653

>COG0623 FabI Enoyl-[acyl-carrier-protein]

Probab=99.96  E-value=2.8e-28  Score=195.28  Aligned_cols=189  Identities=23%  Similarity=0.315  Sum_probs=169.8

Q ss_pred             cCCCCCEEEEcCCC--ChHHHHHHHHHHHcCCeEEEEeCCcchHHHHHHHHHhhCCCcEEEEEccCCCHHHHHHHHHHHH
Q 044010           43 EDVSGKVVIITGAS--SGIGEHLAYEYARRGACLALCARREKSLEEVADTAREIGSPDVITIRADVSKVDDCRSLVEETM  120 (248)
Q Consensus        43 ~~~~~k~~lVtGg~--~gIG~aia~~l~~~G~~V~l~~r~~~~~~~~~~~l~~~~~~~v~~~~~D~~~~~~~~~~~~~~~  120 (248)
                      ..++||++||+|-.  ++|+..||+.|.++|+++.++..++ ++++..+++.+..+ ...+++||+++.++++++++++.
T Consensus         2 g~L~GK~~lI~Gvan~rSIAwGIAk~l~~~GAeL~fTy~~e-~l~krv~~la~~~~-s~~v~~cDV~~d~~i~~~f~~i~   79 (259)
T COG0623           2 GLLEGKRILIMGVANNRSIAWGIAKALAEQGAELAFTYQGE-RLEKRVEELAEELG-SDLVLPCDVTNDESIDALFATIK   79 (259)
T ss_pred             CccCCceEEEEEecccccHHHHHHHHHHHcCCEEEEEeccH-HHHHHHHHHHhhcc-CCeEEecCCCCHHHHHHHHHHHH
Confidence            46899999999986  7999999999999999999999987 77777777766554 35679999999999999999999


Q ss_pred             hHcCCccEEEEccccCCc----ccccccCChHHHHHHHHhhhHHHHHHHHHHhhhhhhcCCeEEEEcCccccccCCCCcc
Q 044010          121 NHFGRLDHLVNNAGISSV----ALFEDIVNITDFKQIMNINFWGSVYTTRFAVPHLRYTKGKIVVLSSAASWLTAPRMSF  196 (248)
Q Consensus       121 ~~~g~id~vv~~ag~~~~----~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~g~iV~isS~~~~~~~~~~~~  196 (248)
                      +++|++|.+||+.|+.+.    +.+.+ ++.|+|...+++..+|...+.+++.|.|. .+|++|.+|-..+....|.|-.
T Consensus        80 ~~~g~lD~lVHsIaFa~k~el~G~~~d-tsre~f~~a~~IS~YS~~~lak~a~~lM~-~ggSiltLtYlgs~r~vPnYNv  157 (259)
T COG0623          80 KKWGKLDGLVHSIAFAPKEELKGDYLD-TSREGFLIAMDISAYSFTALAKAARPLMN-NGGSILTLTYLGSERVVPNYNV  157 (259)
T ss_pred             HhhCcccEEEEEeccCChHHhCCcccc-cCHHHHHhHhhhhHhhHHHHHHHHHHhcC-CCCcEEEEEeccceeecCCCch
Confidence            999999999999999873    33444 78899999999999999999999999997 5899999999999899999999


Q ss_pred             chHHHHHHHHHHHHHHHHhCCC-eEEEEEecCccccCccc
Q 044010          197 YNASKAALVLFFETLRVELGSD-VGVTIVTPGFIESELTQ  235 (248)
Q Consensus       197 Y~~sKaal~~l~~~la~~~~~~-i~v~~v~pg~v~T~~~~  235 (248)
                      ++.+|++++.-+|.||.+++++ ||||+|+.||++|=-..
T Consensus       158 MGvAKAaLEasvRyLA~dlG~~gIRVNaISAGPIrTLAas  197 (259)
T COG0623         158 MGVAKAALEASVRYLAADLGKEGIRVNAISAGPIRTLAAS  197 (259)
T ss_pred             hHHHHHHHHHHHHHHHHHhCccCeEEeeecccchHHHHhh
Confidence            9999999999999999999985 99999999999994433

>PRK05786 fabG 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional

Probab=99.96  E-value=5.8e-28  Score=200.97  Aligned_cols=187  Identities=24%  Similarity=0.363  Sum_probs=160.8

Q ss_pred             cCCCCCEEEEcCCCChHHHHHHHHHHHcCCeEEEEeCCcchHHHHHHHHHhhCCCcEEEEEccCCCHHHHHHHHHHHHhH
Q 044010           43 EDVSGKVVIITGASSGIGEHLAYEYARRGACLALCARREKSLEEVADTAREIGSPDVITIRADVSKVDDCRSLVEETMNH  122 (248)
Q Consensus        43 ~~~~~k~~lVtGg~~gIG~aia~~l~~~G~~V~l~~r~~~~~~~~~~~l~~~~~~~v~~~~~D~~~~~~~~~~~~~~~~~  122 (248)
                      |++++|+++||||+++||.++++.|+++|++|++++|+.++.+...+.+...+  .+.++.+|+++.++++++++++.+.
T Consensus         1 ~~~~~~~vlItGa~g~iG~~~a~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~--~~~~~~~Dl~~~~~~~~~~~~~~~~   78 (238)
T PRK05786          1 MRLKGKKVAIIGVSEGLGYAVAYFALKEGAQVCINSRNENKLKRMKKTLSKYG--NIHYVVGDVSSTESARNVIEKAAKV   78 (238)
T ss_pred             CCcCCcEEEEECCCchHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcC--CeEEEECCCCCHHHHHHHHHHHHHH
Confidence            35789999999999999999999999999999999999877666555554432  5788999999999999999999888


Q ss_pred             cCCccEEEEccccCCcccccccCChHHHHHHHHhhhHHHHHHHHHHhhhhhhcCCeEEEEcCcccc-ccCCCCccchHHH
Q 044010          123 FGRLDHLVNNAGISSVALFEDIVNITDFKQIMNINFWGSVYTTRFAVPHLRYTKGKIVVLSSAASW-LTAPRMSFYNASK  201 (248)
Q Consensus       123 ~g~id~vv~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~g~iV~isS~~~~-~~~~~~~~Y~~sK  201 (248)
                      ++.+|.+++++|.....+..   +.+++++.+++|+.+++.+.+.+.|.+. +++++|++||..+. .+.+....|++||
T Consensus        79 ~~~id~ii~~ag~~~~~~~~---~~~~~~~~~~~n~~~~~~~~~~~~~~~~-~~~~iv~~ss~~~~~~~~~~~~~Y~~sK  154 (238)
T PRK05786         79 LNAIDGLVVTVGGYVEDTVE---EFSGLEEMLTNHIKIPLYAVNASLRFLK-EGSSIVLVSSMSGIYKASPDQLSYAVAK  154 (238)
T ss_pred             hCCCCEEEEcCCCcCCCchH---HHHHHHHHHHHhchHHHHHHHHHHHHHh-cCCEEEEEecchhcccCCCCchHHHHHH
Confidence            89999999999975443332   3488999999999999999999999986 46899999998764 3556678899999


Q ss_pred             HHHHHHHHHHHHHhCC-CeEEEEEecCccccCccc
Q 044010          202 AALVLFFETLRVELGS-DVGVTIVTPGFIESELTQ  235 (248)
Q Consensus       202 aal~~l~~~la~~~~~-~i~v~~v~pg~v~T~~~~  235 (248)
                      ++++.+++.++.++.+ ++++++|.||++.|++..
T Consensus       155 ~~~~~~~~~~~~~~~~~gi~v~~i~pg~v~~~~~~  189 (238)
T PRK05786        155 AGLAKAVEILASELLGRGIRVNGIAPTTISGDFEP  189 (238)
T ss_pred             HHHHHHHHHHHHHHhhcCeEEEEEecCccCCCCCc
Confidence            9999999999999976 599999999999998753

>TIGR01830 3oxo_ACP_reduc 3-oxoacyl-(acyl-carrier-protein) reductase

Probab=99.96  E-value=1.5e-27  Score=198.17  Aligned_cols=185  Identities=31%  Similarity=0.510  Sum_probs=160.6

Q ss_pred             EEEcCCCChHHHHHHHHHHHcCCeEEEEeCCc-chHHHHHHHHHhhCCCcEEEEEccCCCHHHHHHHHHHHHhHcCCccE
Q 044010           50 VIITGASSGIGEHLAYEYARRGACLALCARRE-KSLEEVADTAREIGSPDVITIRADVSKVDDCRSLVEETMNHFGRLDH  128 (248)
Q Consensus        50 ~lVtGg~~gIG~aia~~l~~~G~~V~l~~r~~-~~~~~~~~~l~~~~~~~v~~~~~D~~~~~~~~~~~~~~~~~~g~id~  128 (248)
                      +||||++++||.+++++|+++|++|++++|+. +..+...+.+++.+ .++.++.+|++|.++++++++++.+.++++|+
T Consensus         1 vlItG~~g~iG~~la~~l~~~G~~v~~~~r~~~~~~~~~~~~~~~~~-~~~~~~~~D~~~~~~~~~~~~~~~~~~~~id~   79 (239)
T TIGR01830         1 ALVTGASRGIGRAIALKLAKEGAKVIITYRSSEEGAEEVVEELKAYG-VKALGVVCDVSDREDVKAVVEEIEEELGPIDI   79 (239)
T ss_pred             CEEECCCcHHHHHHHHHHHHCCCEEEEEeCCchhHHHHHHHHHHhcC-CceEEEEecCCCHHHHHHHHHHHHHHhCCCCE
Confidence            58999999999999999999999999999875 44455555565544 36889999999999999999999999999999


Q ss_pred             EEEccccCCcccccccCChHHHHHHHHhhhHHHHHHHHHHhhhhhhc-CCeEEEEcCccccccCCCCccchHHHHHHHHH
Q 044010          129 LVNNAGISSVALFEDIVNITDFKQIMNINFWGSVYTTRFAVPHLRYT-KGKIVVLSSAASWLTAPRMSFYNASKAALVLF  207 (248)
Q Consensus       129 vv~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~-~g~iV~isS~~~~~~~~~~~~Y~~sKaal~~l  207 (248)
                      +||++|.....+..+ .+.+++++.+++|+.+++.+++.+.+.+.+. .++++++||..+..+.++...|+++|++++.+
T Consensus        80 vi~~ag~~~~~~~~~-~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~v~~sS~~~~~g~~~~~~y~~~k~a~~~~  158 (239)
T TIGR01830        80 LVNNAGITRDNLLMR-MKEEDWDAVIDTNLTGVFNLTQAVLRIMIKQRSGRIINISSVVGLMGNAGQANYAASKAGVIGF  158 (239)
T ss_pred             EEECCCCCCCCChhh-CCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcCCeEEEEECCccccCCCCCCchhHHHHHHHHHH
Confidence            999999865544443 4668999999999999999999999987643 47999999998888888899999999999999


Q ss_pred             HHHHHHHhCC-CeEEEEEecCccccCcccc
Q 044010          208 FETLRVELGS-DVGVTIVTPGFIESELTQG  236 (248)
Q Consensus       208 ~~~la~~~~~-~i~v~~v~pg~v~T~~~~~  236 (248)
                      ++.++.++.. ++++++++||+++|++...
T Consensus       159 ~~~l~~~~~~~g~~~~~i~pg~~~~~~~~~  188 (239)
T TIGR01830       159 TKSLAKELASRNITVNAVAPGFIDTDMTDK  188 (239)
T ss_pred             HHHHHHHHhhcCeEEEEEEECCCCChhhhh
Confidence            9999999865 5999999999999987654

This model represents 3-oxoacyl-[ACP] reductase, also called 3-ketoacyl-acyl carrier protein reductase, an enzyme of fatty acid biosynthesis.

>PRK06953 short chain dehydrogenase; Provisional

Probab=99.96  E-value=1e-27  Score=198.00  Aligned_cols=179  Identities=23%  Similarity=0.309  Sum_probs=148.2

Q ss_pred             CEEEEcCCCChHHHHHHHHHHHcCCeEEEEeCCcchHHHHHHHHHhhCCCcEEEEEccCCCHHHHHHHHHHHHhHcCCcc
Q 044010           48 KVVIITGASSGIGEHLAYEYARRGACLALCARREKSLEEVADTAREIGSPDVITIRADVSKVDDCRSLVEETMNHFGRLD  127 (248)
Q Consensus        48 k~~lVtGg~~gIG~aia~~l~~~G~~V~l~~r~~~~~~~~~~~l~~~~~~~v~~~~~D~~~~~~~~~~~~~~~~~~g~id  127 (248)
                      |+++||||+++||++++++|+++|++|++++|+.++.++    +...   .+.++.+|+++.++++++++++.+  +++|
T Consensus         2 ~~vlvtG~sg~iG~~la~~L~~~G~~v~~~~r~~~~~~~----~~~~---~~~~~~~D~~~~~~v~~~~~~~~~--~~~d   72 (222)
T PRK06953          2 KTVLIVGASRGIGREFVRQYRADGWRVIATARDAAALAA----LQAL---GAEALALDVADPASVAGLAWKLDG--EALD   72 (222)
T ss_pred             ceEEEEcCCCchhHHHHHHHHhCCCEEEEEECCHHHHHH----HHhc---cceEEEecCCCHHHHHHHHHHhcC--CCCC
Confidence            689999999999999999999999999999998765443    2222   356789999999999998877643  4799


Q ss_pred             EEEEccccCCcc-cccccCChHHHHHHHHhhhHHHHHHHHHHhhhhhhcCCeEEEEcCccccccCCCC---ccchHHHHH
Q 044010          128 HLVNNAGISSVA-LFEDIVNITDFKQIMNINFWGSVYTTRFAVPHLRYTKGKIVVLSSAASWLTAPRM---SFYNASKAA  203 (248)
Q Consensus       128 ~vv~~ag~~~~~-~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~g~iV~isS~~~~~~~~~~---~~Y~~sKaa  203 (248)
                      ++|||+|..... ......+.++|++.+++|+.+++.+++++.|.|.+.+|+++++||..+..+....   ..|+++|++
T Consensus        73 ~vi~~ag~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~g~iv~isS~~~~~~~~~~~~~~~Y~~sK~a  152 (222)
T PRK06953         73 AAVYVAGVYGPRTEGVEPITREDFDAVMHTNVLGPMQLLPILLPLVEAAGGVLAVLSSRMGSIGDATGTTGWLYRASKAA  152 (222)
T ss_pred             EEEECCCcccCCCCCcccCCHHHHHHHHhhhhhhHHHHHHHHHHhhhccCCeEEEEcCcccccccccCCCccccHHhHHH
Confidence            999999976322 2222346799999999999999999999999987667899999998776553322   359999999


Q ss_pred             HHHHHHHHHHHhCCCeEEEEEecCccccCcccc
Q 044010          204 LVLFFETLRVELGSDVGVTIVTPGFIESELTQG  236 (248)
Q Consensus       204 l~~l~~~la~~~~~~i~v~~v~pg~v~T~~~~~  236 (248)
                      ++++++.++.++. +++||+|+||+++|++.+.
T Consensus       153 ~~~~~~~~~~~~~-~i~v~~v~Pg~i~t~~~~~  184 (222)
T PRK06953        153 LNDALRAASLQAR-HATCIALHPGWVRTDMGGA  184 (222)
T ss_pred             HHHHHHHHhhhcc-CcEEEEECCCeeecCCCCC
Confidence            9999999999874 5999999999999999764

>PRK08017 oxidoreductase; Provisional

Probab=99.96  E-value=2e-27  Score=199.78  Aligned_cols=181  Identities=29%  Similarity=0.447  Sum_probs=157.5

Q ss_pred             CEEEEcCCCChHHHHHHHHHHHcCCeEEEEeCCcchHHHHHHHHHhhCCCcEEEEEccCCCHHHHHHHHHHHHhHc-CCc
Q 044010           48 KVVIITGASSGIGEHLAYEYARRGACLALCARREKSLEEVADTAREIGSPDVITIRADVSKVDDCRSLVEETMNHF-GRL  126 (248)
Q Consensus        48 k~~lVtGg~~gIG~aia~~l~~~G~~V~l~~r~~~~~~~~~~~l~~~~~~~v~~~~~D~~~~~~~~~~~~~~~~~~-g~i  126 (248)
                      |+++||||+|+||.+++++|+++|++|++++|+.++.+..    ++.   .+..+.+|++|.+++.++++.+.+.. +.+
T Consensus         3 k~vlVtGasg~IG~~la~~l~~~g~~v~~~~r~~~~~~~~----~~~---~~~~~~~D~~~~~~~~~~~~~i~~~~~~~~   75 (256)
T PRK08017          3 KSVLITGCSSGIGLEAALELKRRGYRVLAACRKPDDVARM----NSL---GFTGILLDLDDPESVERAADEVIALTDNRL   75 (256)
T ss_pred             CEEEEECCCChHHHHHHHHHHHCCCEEEEEeCCHHHhHHH----HhC---CCeEEEeecCCHHHHHHHHHHHHHhcCCCC
Confidence            6899999999999999999999999999999987655433    221   36788999999999999999887653 689


Q ss_pred             cEEEEccccCCcccccccCChHHHHHHHHhhhHHHHHHHHHHhhhhhhcC-CeEEEEcCccccccCCCCccchHHHHHHH
Q 044010          127 DHLVNNAGISSVALFEDIVNITDFKQIMNINFWGSVYTTRFAVPHLRYTK-GKIVVLSSAASWLTAPRMSFYNASKAALV  205 (248)
Q Consensus       127 d~vv~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~-g~iV~isS~~~~~~~~~~~~Y~~sKaal~  205 (248)
                      |.+|||+|.....+..+ .+.+++++.+++|+.|++.+.+.+.+.|.+.+ +++|++||..+..+.++...|+++|++++
T Consensus        76 ~~ii~~ag~~~~~~~~~-~~~~~~~~~~~~n~~g~~~~~~~~~~~~~~~~~~~iv~~ss~~~~~~~~~~~~Y~~sK~~~~  154 (256)
T PRK08017         76 YGLFNNAGFGVYGPLST-ISRQQMEQQFSTNFFGTHQLTMLLLPAMLPHGEGRIVMTSSVMGLISTPGRGAYAASKYALE  154 (256)
T ss_pred             eEEEECCCCCCccchhh-CCHHHHHHHHHHhhHHHHHHHHHHHHHHhhcCCCEEEEEcCcccccCCCCccHHHHHHHHHH
Confidence            99999999776554444 57799999999999999999999999987544 89999999988888889999999999999


Q ss_pred             HHHHHHHHHhCC-CeEEEEEecCccccCcccc
Q 044010          206 LFFETLRVELGS-DVGVTIVTPGFIESELTQG  236 (248)
Q Consensus       206 ~l~~~la~~~~~-~i~v~~v~pg~v~T~~~~~  236 (248)
                      .++++++.++.+ ++++++|.||+++|++.+.
T Consensus       155 ~~~~~l~~~~~~~~i~v~~v~pg~~~t~~~~~  186 (256)
T PRK08017        155 AWSDALRMELRHSGIKVSLIEPGPIRTRFTDN  186 (256)
T ss_pred             HHHHHHHHHHhhcCCEEEEEeCCCcccchhhc
Confidence            999999999876 4999999999999988764

>PRK12367 short chain dehydrogenase; Provisional

Probab=99.95  E-value=1.1e-26  Score=194.94  Aligned_cols=175  Identities=19%  Similarity=0.166  Sum_probs=133.5

Q ss_pred             cCCCCCEEEEcCCCChHHHHHHHHHHHcCCeEEEEeCCcchHHHHHHHHHhhCCCcEEEEEccCCCHHHHHHHHHHHHhH
Q 044010           43 EDVSGKVVIITGASSGIGEHLAYEYARRGACLALCARREKSLEEVADTAREIGSPDVITIRADVSKVDDCRSLVEETMNH  122 (248)
Q Consensus        43 ~~~~~k~~lVtGg~~gIG~aia~~l~~~G~~V~l~~r~~~~~~~~~~~l~~~~~~~v~~~~~D~~~~~~~~~~~~~~~~~  122 (248)
                      .++++|+++||||++|||.+++++|+++|++|++++|+.....   +... ..  ....+.+|++|.+++++       .
T Consensus        10 ~~l~~k~~lITGas~gIG~ala~~l~~~G~~Vi~~~r~~~~~~---~~~~-~~--~~~~~~~D~~~~~~~~~-------~   76 (245)
T PRK12367         10 STWQGKRIGITGASGALGKALTKAFRAKGAKVIGLTHSKINNS---ESND-ES--PNEWIKWECGKEESLDK-------Q   76 (245)
T ss_pred             HhhCCCEEEEEcCCcHHHHHHHHHHHHCCCEEEEEECCchhhh---hhhc-cC--CCeEEEeeCCCHHHHHH-------h
Confidence            4678999999999999999999999999999999999863211   1111 11  22568899999987754       3


Q ss_pred             cCCccEEEEccccCCcccccccCChHHHHHHHHhhhHHHHHHHHHHhhhhhhc----CCeEEEEcCccccccCCCCccch
Q 044010          123 FGRLDHLVNNAGISSVALFEDIVNITDFKQIMNINFWGSVYTTRFAVPHLRYT----KGKIVVLSSAASWLTAPRMSFYN  198 (248)
Q Consensus       123 ~g~id~vv~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~----~g~iV~isS~~~~~~~~~~~~Y~  198 (248)
                      ++++|++|||||.....   + .+.++|++.+++|+.+++.+++.+.|.|.++    ++.+++.||.++..+ +..+.|+
T Consensus        77 ~~~iDilVnnAG~~~~~---~-~~~~~~~~~~~vN~~g~~~l~~~~~~~m~~~~~~~g~~iiv~ss~a~~~~-~~~~~Y~  151 (245)
T PRK12367         77 LASLDVLILNHGINPGG---R-QDPENINKALEINALSSWRLLELFEDIALNNNSQIPKEIWVNTSEAEIQP-ALSPSYE  151 (245)
T ss_pred             cCCCCEEEECCccCCcC---C-CCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcccCCCeEEEEEecccccCC-CCCchhH
Confidence            56899999999975322   2 4679999999999999999999999998652    234545566665544 4567899


Q ss_pred             HHHHHHHHHH---HHHHHHhCC-CeEEEEEecCccccCccc
Q 044010          199 ASKAALVLFF---ETLRVELGS-DVGVTIVTPGFIESELTQ  235 (248)
Q Consensus       199 ~sKaal~~l~---~~la~~~~~-~i~v~~v~pg~v~T~~~~  235 (248)
                      +||+|+..+.   +.++.|+.+ +++|+++.||+++|++..
T Consensus       152 aSKaal~~~~~l~~~l~~e~~~~~i~v~~~~pg~~~t~~~~  192 (245)
T PRK12367        152 ISKRLIGQLVSLKKNLLDKNERKKLIIRKLILGPFRSELNP  192 (245)
T ss_pred             HHHHHHHHHHHHHHHHHHhhcccccEEEEecCCCcccccCc
Confidence            9999986543   444445455 599999999999999753

>PRK08219 short chain dehydrogenase; Provisional

Probab=99.95  E-value=3.7e-26  Score=188.51  Aligned_cols=179  Identities=32%  Similarity=0.492  Sum_probs=153.5

Q ss_pred             CCEEEEcCCCChHHHHHHHHHHHcCCeEEEEeCCcchHHHHHHHHHhhCCCcEEEEEccCCCHHHHHHHHHHHHhHcCCc
Q 044010           47 GKVVIITGASSGIGEHLAYEYARRGACLALCARREKSLEEVADTAREIGSPDVITIRADVSKVDDCRSLVEETMNHFGRL  126 (248)
Q Consensus        47 ~k~~lVtGg~~gIG~aia~~l~~~G~~V~l~~r~~~~~~~~~~~l~~~~~~~v~~~~~D~~~~~~~~~~~~~~~~~~g~i  126 (248)
                      .|+++||||+|+||.+++++|+++ ++|++++|+.++.++..+..     ..+.++.+|++|.+++++++++.    +++
T Consensus         3 ~~~vlVtG~~g~iG~~l~~~l~~~-~~V~~~~r~~~~~~~~~~~~-----~~~~~~~~D~~~~~~~~~~~~~~----~~i   72 (227)
T PRK08219          3 RPTALITGASRGIGAAIARELAPT-HTLLLGGRPAERLDELAAEL-----PGATPFPVDLTDPEAIAAAVEQL----GRL   72 (227)
T ss_pred             CCEEEEecCCcHHHHHHHHHHHhh-CCEEEEeCCHHHHHHHHHHh-----ccceEEecCCCCHHHHHHHHHhc----CCC
Confidence            579999999999999999999999 99999999876544433322     25778999999999998887653    589


Q ss_pred             cEEEEccccCCcccccccCChHHHHHHHHhhhHHHHHHHHHHhhhhhhcCCeEEEEcCccccccCCCCccchHHHHHHHH
Q 044010          127 DHLVNNAGISSVALFEDIVNITDFKQIMNINFWGSVYTTRFAVPHLRYTKGKIVVLSSAASWLTAPRMSFYNASKAALVL  206 (248)
Q Consensus       127 d~vv~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~g~iV~isS~~~~~~~~~~~~Y~~sKaal~~  206 (248)
                      |++||++|.....+..+ .+.+++.+.+++|+.+++.+.+.+++.+++..+++|++||..+..+.++...|+++|++++.
T Consensus        73 d~vi~~ag~~~~~~~~~-~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~~v~~ss~~~~~~~~~~~~y~~~K~a~~~  151 (227)
T PRK08219         73 DVLVHNAGVADLGPVAE-STVDEWRATLEVNVVAPAELTRLLLPALRAAHGHVVFINSGAGLRANPGWGSYAASKFALRA  151 (227)
T ss_pred             CEEEECCCcCCCCCccc-CCHHHHHHHHHHHhHHHHHHHHHHHHHHHhCCCeEEEEcchHhcCcCCCCchHHHHHHHHHH
Confidence            99999999866554443 46789999999999999999999999988777899999999998888889999999999999


Q ss_pred             HHHHHHHHhCCCeEEEEEecCccccCcccc
Q 044010          207 FFETLRVELGSDVGVTIVTPGFIESELTQG  236 (248)
Q Consensus       207 l~~~la~~~~~~i~v~~v~pg~v~T~~~~~  236 (248)
                      +++.++.++...+++++|.||.++|++...
T Consensus       152 ~~~~~~~~~~~~i~~~~i~pg~~~~~~~~~  181 (227)
T PRK08219        152 LADALREEEPGNVRVTSVHPGRTDTDMQRG  181 (227)
T ss_pred             HHHHHHHHhcCCceEEEEecCCccchHhhh
Confidence            999999987644999999999999987553

>KOG1204 consensus Predicted dehydrogenase [Secondary metabolites biosynthesis, transport and catabolism]

Probab=99.95  E-value=7.5e-28  Score=192.61  Aligned_cols=192  Identities=23%  Similarity=0.272  Sum_probs=158.2

Q ss_pred             CCCEEEEcCCCChHHHHHHHHHHHcCCeEEEEeCCcchHHHHHHHHHhhCCCcEEEEEccCCCHHHHHHHHHHHHhHcCC
Q 044010           46 SGKVVIITGASSGIGEHLAYEYARRGACLALCARREKSLEEVADTAREIGSPDVITIRADVSKVDDCRSLVEETMNHFGR  125 (248)
Q Consensus        46 ~~k~~lVtGg~~gIG~aia~~l~~~G~~V~l~~r~~~~~~~~~~~l~~~~~~~v~~~~~D~~~~~~~~~~~~~~~~~~g~  125 (248)
                      .+|++|+||+++|||...+..+.+++-+....+++...++  .+.++...++.......|.+...-+.++.+..+++.|+
T Consensus         5 ~r~villTGaSrgiG~~~v~~i~aed~e~~r~g~~r~~a~--~~~L~v~~gd~~v~~~g~~~e~~~l~al~e~~r~k~gk   82 (253)
T KOG1204|consen    5 MRKVILLTGASRGIGTGSVATILAEDDEALRYGVARLLAE--LEGLKVAYGDDFVHVVGDITEEQLLGALREAPRKKGGK   82 (253)
T ss_pred             cceEEEEecCCCCccHHHHHHHHhcchHHHHHhhhccccc--ccceEEEecCCcceechHHHHHHHHHHHHhhhhhcCCc
Confidence            4678999999999999999988888766555555444333  22233223334556678888888899999999999999


Q ss_pred             ccEEEEccccCCccccc--ccCChHHHHHHHHhhhHHHHHHHHHHhhhhhhc--CCeEEEEcCccccccCCCCccchHHH
Q 044010          126 LDHLVNNAGISSVALFE--DIVNITDFKQIMNINFWGSVYTTRFAVPHLRYT--KGKIVVLSSAASWLTAPRMSFYNASK  201 (248)
Q Consensus       126 id~vv~~ag~~~~~~~~--~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~--~g~iV~isS~~~~~~~~~~~~Y~~sK  201 (248)
                      .|++|||||...+-...  ++.+.++|++.++.|++|.+.+.+.++|.+++.  .+.+||+||.+++.|.+++++|+++|
T Consensus        83 r~iiI~NAG~lgdvsk~~~~~~D~~qw~ky~~~NlfS~VsL~~~~l~~lk~~p~~~~vVnvSS~aav~p~~~wa~yc~~K  162 (253)
T KOG1204|consen   83 RDIIIHNAGSLGDVSKGAVDLGDSDQWKKYWDLNLFSMVSLVQWALPKLKKSPVNGNVVNVSSLAAVRPFSSWAAYCSSK  162 (253)
T ss_pred             eeEEEecCCCccchhhccCCcccHHHHHHHHHhhhhhHHhhHHHHHHHhcCCCccCeEEEecchhhhccccHHHHhhhhH
Confidence            99999999987654322  245779999999999999999999999999877  49999999999999999999999999


Q ss_pred             HHHHHHHHHHHHHhCCCeEEEEEecCccccCccccccc
Q 044010          202 AALVLFFETLRVELGSDVGVTIVTPGFIESELTQGKFL  239 (248)
Q Consensus       202 aal~~l~~~la~~~~~~i~v~~v~pg~v~T~~~~~~~~  239 (248)
                      +|.+.+.+.+|.|-..+++|.+++||+++|+|....-+
T Consensus       163 aAr~m~f~~lA~EEp~~v~vl~~aPGvvDT~mq~~ir~  200 (253)
T KOG1204|consen  163 AARNMYFMVLASEEPFDVRVLNYAPGVVDTQMQVCIRE  200 (253)
T ss_pred             HHHHHHHHHHhhcCccceeEEEccCCcccchhHHHHhh
Confidence            99999999999995446999999999999999875533

>TIGR02813 omega_3_PfaA polyketide-type polyunsaturated fatty acid synthase PfaA

Probab=99.94  E-value=2.2e-25  Score=230.77  Aligned_cols=183  Identities=17%  Similarity=0.179  Sum_probs=156.3

Q ss_pred             CCCEEEEcCCCChHHHHHHHHHHHc-CCeEEEEeCCcc------------------------------------------
Q 044010           46 SGKVVIITGASSGIGEHLAYEYARR-GACLALCARREK------------------------------------------   82 (248)
Q Consensus        46 ~~k~~lVtGg~~gIG~aia~~l~~~-G~~V~l~~r~~~------------------------------------------   82 (248)
                      +|+++|||||++|||.++|++|+++ |++|++++|+..                                          
T Consensus      1996 ~g~vvLVTGGarGIG~aiA~~LA~~~ga~viL~gRs~~~~~~p~~a~~~~~~~lk~~~~~~l~~~g~~~~P~~i~~~~~~ 2075 (2582)
T TIGR02813      1996 SDDVFLVTGGAKGVTFECALELAKQCQAHFILAGRSSFDDNEPSWAQGKDENELKKAAIQHLQASGEKPTPKKVDALVRP 2075 (2582)
T ss_pred             CCCEEEEeCCCCHHHHHHHHHHHHhcCCEEEEEeCCcccccCchhhhccchHHHHHhhhhhhhhcccccccchhhhcccc
Confidence            5899999999999999999999998 689999999820                                          


Q ss_pred             -----hHHHHHHHHHhhCCCcEEEEEccCCCHHHHHHHHHHHHhHcCCccEEEEccccCCcccccccCChHHHHHHHHhh
Q 044010           83 -----SLEEVADTAREIGSPDVITIRADVSKVDDCRSLVEETMNHFGRLDHLVNNAGISSVALFEDIVNITDFKQIMNIN  157 (248)
Q Consensus        83 -----~~~~~~~~l~~~~~~~v~~~~~D~~~~~~~~~~~~~~~~~~g~id~vv~~ag~~~~~~~~~~~~~~~~~~~~~~n  157 (248)
                           +.++..+.+++.+ .++.++.||++|.++++++++++.++ +++|++|||||+...+.+.+ .+.++|++.+++|
T Consensus      2076 ~~~~~ei~~~la~l~~~G-~~v~y~~~DVtD~~av~~av~~v~~~-g~IDgVVhnAGv~~~~~i~~-~t~e~f~~v~~~n 2152 (2582)
T TIGR02813      2076 VLSSLEIAQALAAFKAAG-ASAEYASADVTNSVSVAATVQPLNKT-LQITGIIHGAGVLADKHIQD-KTLEEFNAVYGTK 2152 (2582)
T ss_pred             cchhHHHHHHHHHHHhcC-CcEEEEEccCCCHHHHHHHHHHHHHh-CCCcEEEECCccCCCCCccc-CCHHHHHHHHHHH
Confidence                 0111122333333 47889999999999999999999877 68999999999887666655 5789999999999


Q ss_pred             hHHHHHHHHHHhhhhhhcCCeEEEEcCccccccCCCCccchHHHHHHHHHHHHHHHHhCCCeEEEEEecCccccCccc
Q 044010          158 FWGSVYTTRFAVPHLRYTKGKIVVLSSAASWLTAPRMSFYNASKAALVLFFETLRVELGSDVGVTIVTPGFIESELTQ  235 (248)
Q Consensus       158 ~~~~~~l~~~~~~~~~~~~g~iV~isS~~~~~~~~~~~~Y~~sKaal~~l~~~la~~~~~~i~v~~v~pg~v~T~~~~  235 (248)
                      +.|.+++++.+.+.+.   ++||++||.++..+.+++..|+++|++++++++.++.++. ++||++|+||+++|+|..
T Consensus      2153 v~G~~~Ll~al~~~~~---~~IV~~SSvag~~G~~gqs~YaaAkaaL~~la~~la~~~~-~irV~sI~wG~wdtgm~~ 2226 (2582)
T TIGR02813      2153 VDGLLSLLAALNAENI---KLLALFSSAAGFYGNTGQSDYAMSNDILNKAALQLKALNP-SAKVMSFNWGPWDGGMVN 2226 (2582)
T ss_pred             HHHHHHHHHHHHHhCC---CeEEEEechhhcCCCCCcHHHHHHHHHHHHHHHHHHHHcC-CcEEEEEECCeecCCccc
Confidence            9999999999876532   4799999999999999999999999999999999999974 489999999999999865

Members of the seed for this alignment are involved in omega-3 polyunsaturated fatty acid biosynthesis, such as the protein PfaA from the eicosapentaenoic acid biosynthesis operon in Photobacterium profundum strain SS9. PfaA is encoded together with PfaB, PfaC, and PfaD, and the functions of the individual polypeptides have not yet been described. More distant homologs of PfaA, also included with the reach of this model, appear to be involved in polyketide-like biosynthetic mechanisms of polyunsaturated fatty acid biosynthesis, an alternative to the more familiar iterated mechanism of chain extension and desaturation, and in most cases are encoded near genes for homologs of PfaB, PfaC, and/or PfaD.

>smart00822 PKS_KR This enzymatic domain is part of bacterial polyketide synthases and catalyses the first step in the reductive modification of the beta-carbonyl centres in the growing polyketide chain

Probab=99.92  E-value=1.2e-23  Score=165.88  Aligned_cols=175  Identities=22%  Similarity=0.267  Sum_probs=145.7

Q ss_pred             CEEEEcCCCChHHHHHHHHHHHcCC-eEEEEeCCcchHHHH---HHHHHhhCCCcEEEEEccCCCHHHHHHHHHHHHhHc
Q 044010           48 KVVIITGASSGIGEHLAYEYARRGA-CLALCARREKSLEEV---ADTAREIGSPDVITIRADVSKVDDCRSLVEETMNHF  123 (248)
Q Consensus        48 k~~lVtGg~~gIG~aia~~l~~~G~-~V~l~~r~~~~~~~~---~~~l~~~~~~~v~~~~~D~~~~~~~~~~~~~~~~~~  123 (248)
                      |+++||||++|||.+++++|+++|+ .|++++|+.+..+..   .+++++.+ .++.++.+|++++++++++++++.+.+
T Consensus         1 ~~~li~Ga~~~iG~~~~~~l~~~g~~~v~~~~r~~~~~~~~~~~~~~~~~~~-~~~~~~~~D~~~~~~~~~~~~~~~~~~   79 (180)
T smart00822        1 GTYLITGGLGGLGLELARWLAERGARHLVLLSRSGPDAPGAAELLAELEALG-AEVTVVACDVADRAALAAALAAIPARL   79 (180)
T ss_pred             CEEEEEcCCChHHHHHHHHHHHhhCCeEEEEeCCCCCCccHHHHHHHHHhcC-CeEEEEECCCCCHHHHHHHHHHHHHHc
Confidence            5799999999999999999999997 688888876554332   23444333 378889999999999999999998889


Q ss_pred             CCccEEEEccccCCcccccccCChHHHHHHHHhhhHHHHHHHHHHhhhhhhcCCeEEEEcCccccccCCCCccchHHHHH
Q 044010          124 GRLDHLVNNAGISSVALFEDIVNITDFKQIMNINFWGSVYTTRFAVPHLRYTKGKIVVLSSAASWLTAPRMSFYNASKAA  203 (248)
Q Consensus       124 g~id~vv~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~g~iV~isS~~~~~~~~~~~~Y~~sKaa  203 (248)
                      +++|.+||++|.....+..+ .+.+++++.+++|+.+++.+.+.+.+   ...++++++||..+..+.++...|+++|++
T Consensus        80 ~~id~li~~ag~~~~~~~~~-~~~~~~~~~~~~n~~~~~~l~~~~~~---~~~~~ii~~ss~~~~~~~~~~~~y~~sk~~  155 (180)
T smart00822       80 GPLRGVIHAAGVLDDGLLAN-LTPERFAAVLAPKVDGAWNLHELTRD---LPLDFFVLFSSVAGVLGNPGQANYAAANAF  155 (180)
T ss_pred             CCeeEEEEccccCCcccccc-CCHHHHHHhhchHhHHHHHHHHHhcc---CCcceEEEEccHHHhcCCCCchhhHHHHHH
Confidence            99999999999765544443 46789999999999999999999843   234799999999988888899999999999


Q ss_pred             HHHHHHHHHHHhCCCeEEEEEecCccc
Q 044010          204 LVLFFETLRVELGSDVGVTIVTPGFIE  230 (248)
Q Consensus       204 l~~l~~~la~~~~~~i~v~~v~pg~v~  230 (248)
                      ++.+++.++.+   ++++.++.||+++
T Consensus       156 ~~~~~~~~~~~---~~~~~~~~~g~~~  179 (180)
T smart00822      156 LDALAAHRRAR---GLPATSINWGAWA  179 (180)
T ss_pred             HHHHHHHHHhc---CCceEEEeecccc
Confidence            99999887654   4779999999875

It uses NADPH to reduce the keto group to a hydroxy group.

>PRK12428 3-alpha-hydroxysteroid dehydrogenase; Provisional

Probab=99.92  E-value=1.6e-24  Score=181.25  Aligned_cols=149  Identities=26%  Similarity=0.273  Sum_probs=127.4

Q ss_pred             HHHHHHHcCCeEEEEeCCcchHHHHHHHHHhhCCCcEEEEEccCCCHHHHHHHHHHHHhHcCCccEEEEccccCCccccc
Q 044010           63 LAYEYARRGACLALCARREKSLEEVADTAREIGSPDVITIRADVSKVDDCRSLVEETMNHFGRLDHLVNNAGISSVALFE  142 (248)
Q Consensus        63 ia~~l~~~G~~V~l~~r~~~~~~~~~~~l~~~~~~~v~~~~~D~~~~~~~~~~~~~~~~~~g~id~vv~~ag~~~~~~~~  142 (248)
                      +|++|+++|++|++++|+.++.+            ...++++|++|.++++++++++.   +++|++|||||....    
T Consensus         1 ~a~~l~~~G~~Vv~~~r~~~~~~------------~~~~~~~Dl~~~~~v~~~~~~~~---~~iD~li~nAG~~~~----   61 (241)
T PRK12428          1 TARLLRFLGARVIGVDRREPGMT------------LDGFIQADLGDPASIDAAVAALP---GRIDALFNIAGVPGT----   61 (241)
T ss_pred             ChHHHHhCCCEEEEEeCCcchhh------------hhHhhcccCCCHHHHHHHHHHhc---CCCeEEEECCCCCCC----
Confidence            47899999999999999876531            12357899999999999998774   689999999997521    


Q ss_pred             ccCChHHHHHHHHhhhHHHHHHHHHHhhhhhhcCCeEEEEcCccccc---------------------------cCCCCc
Q 044010          143 DIVNITDFKQIMNINFWGSVYTTRFAVPHLRYTKGKIVVLSSAASWL---------------------------TAPRMS  195 (248)
Q Consensus       143 ~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~g~iV~isS~~~~~---------------------------~~~~~~  195 (248)
                           +++++.+++|+.+++.+++.+.|.|. .+|+||++||.+++.                           +.++..
T Consensus        62 -----~~~~~~~~vN~~~~~~l~~~~~~~~~-~~g~Iv~isS~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  135 (241)
T PRK12428         62 -----APVELVARVNFLGLRHLTEALLPRMA-PGGAIVNVASLAGAEWPQRLELHKALAATASFDEGAAWLAAHPVALAT  135 (241)
T ss_pred             -----CCHHHhhhhchHHHHHHHHHHHHhcc-CCcEEEEeCcHHhhccccchHHHHhhhccchHHHHHHhhhccCCCccc
Confidence                 34789999999999999999999986 358999999998863                           456678


Q ss_pred             cchHHHHHHHHHHHHHH-HHhCC-CeEEEEEecCccccCcccc
Q 044010          196 FYNASKAALVLFFETLR-VELGS-DVGVTIVTPGFIESELTQG  236 (248)
Q Consensus       196 ~Y~~sKaal~~l~~~la-~~~~~-~i~v~~v~pg~v~T~~~~~  236 (248)
                      +|++||+|+++++++++ .|+++ +||||+|+||.++|+|...
T Consensus       136 ~Y~~sK~a~~~~~~~la~~e~~~~girvn~v~PG~v~T~~~~~  178 (241)
T PRK12428        136 GYQLSKEALILWTMRQAQPWFGARGIRVNCVAPGPVFTPILGD  178 (241)
T ss_pred             HHHHHHHHHHHHHHHHHHHhhhccCeEEEEeecCCccCccccc
Confidence            99999999999999999 99987 4999999999999999764

>PRK07424 bifunctional sterol desaturase/short chain dehydrogenase; Validated

Probab=99.92  E-value=1.2e-23  Score=187.14  Aligned_cols=173  Identities=21%  Similarity=0.201  Sum_probs=133.5

Q ss_pred             CCCCCEEEEcCCCChHHHHHHHHHHHcCCeEEEEeCCcchHHHHHHHHHhhCCCcEEEEEccCCCHHHHHHHHHHHHhHc
Q 044010           44 DVSGKVVIITGASSGIGEHLAYEYARRGACLALCARREKSLEEVADTAREIGSPDVITIRADVSKVDDCRSLVEETMNHF  123 (248)
Q Consensus        44 ~~~~k~~lVtGg~~gIG~aia~~l~~~G~~V~l~~r~~~~~~~~~~~l~~~~~~~v~~~~~D~~~~~~~~~~~~~~~~~~  123 (248)
                      .++||+++||||+||||++++++|+++|++|++++|+.++.+..   ..+.. ..+..+.+|++|.+++.+.       +
T Consensus       175 sl~gK~VLITGASgGIG~aLA~~La~~G~~Vi~l~r~~~~l~~~---~~~~~-~~v~~v~~Dvsd~~~v~~~-------l  243 (406)
T PRK07424        175 SLKGKTVAVTGASGTLGQALLKELHQQGAKVVALTSNSDKITLE---INGED-LPVKTLHWQVGQEAALAEL-------L  243 (406)
T ss_pred             CCCCCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEeCCHHHHHHH---HhhcC-CCeEEEEeeCCCHHHHHHH-------h
Confidence            45799999999999999999999999999999999987654322   22222 2467889999999877554       3


Q ss_pred             CCccEEEEccccCCcccccccCChHHHHHHHHhhhHHHHHHHHHHhhhhhhcC-----CeEEEEcCccccccCCCCccch
Q 044010          124 GRLDHLVNNAGISSVALFEDIVNITDFKQIMNINFWGSVYTTRFAVPHLRYTK-----GKIVVLSSAASWLTAPRMSFYN  198 (248)
Q Consensus       124 g~id~vv~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~-----g~iV~isS~~~~~~~~~~~~Y~  198 (248)
                      +++|++|||||.....    +.+.+++++.+++|+.|++.+++.++|.|++++     +.+|++|+ ++. ..+..+.|+
T Consensus       244 ~~IDiLInnAGi~~~~----~~s~e~~~~~~~vNv~g~i~Li~a~lp~m~~~~~~~~~~iiVn~Ss-a~~-~~~~~~~Y~  317 (406)
T PRK07424        244 EKVDILIINHGINVHG----ERTPEAINKSYEVNTFSAWRLMELFFTTVKTNRDKATKEVWVNTSE-AEV-NPAFSPLYE  317 (406)
T ss_pred             CCCCEEEECCCcCCCC----CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCCCCeEEEEEcc-ccc-cCCCchHHH
Confidence            5899999999975432    246789999999999999999999999987543     34566654 333 324456899


Q ss_pred             HHHHHHHHHHHHHHHHhCCCeEEEEEecCccccCccc
Q 044010          199 ASKAALVLFFETLRVELGSDVGVTIVTPGFIESELTQ  235 (248)
Q Consensus       199 ~sKaal~~l~~~la~~~~~~i~v~~v~pg~v~T~~~~  235 (248)
                      +||+|+.+++. ++++. .++.+..+.||+++|++..
T Consensus       318 ASKaAl~~l~~-l~~~~-~~~~I~~i~~gp~~t~~~~  352 (406)
T PRK07424        318 LSKRALGDLVT-LRRLD-APCVVRKLILGPFKSNLNP  352 (406)
T ss_pred             HHHHHHHHHHH-HHHhC-CCCceEEEEeCCCcCCCCc
Confidence            99999999985 44442 3467778899999999854

>PF08659 KR: KR domain; InterPro: IPR013968 This domain is found in bacterial polyketide synthases that catalyse the first step in the reductive modification of the beta-carbonyl centres in the growing polyketide chain

Probab=99.90  E-value=3.4e-22  Score=160.30  Aligned_cols=174  Identities=23%  Similarity=0.299  Sum_probs=138.5

Q ss_pred             EEEEcCCCChHHHHHHHHHHHcCC-eEEEEeCCc---chHHHHHHHHHhhCCCcEEEEEccCCCHHHHHHHHHHHHhHcC
Q 044010           49 VVIITGASSGIGEHLAYEYARRGA-CLALCARRE---KSLEEVADTAREIGSPDVITIRADVSKVDDCRSLVEETMNHFG  124 (248)
Q Consensus        49 ~~lVtGg~~gIG~aia~~l~~~G~-~V~l~~r~~---~~~~~~~~~l~~~~~~~v~~~~~D~~~~~~~~~~~~~~~~~~g  124 (248)
                      ++|||||.||||..+++.|+++|. +|++++|+.   .+.++..+++++.+. ++.++.||++|+++++++++++.++++
T Consensus         2 tylitGG~gglg~~la~~La~~~~~~~il~~r~~~~~~~~~~~i~~l~~~g~-~v~~~~~Dv~d~~~v~~~~~~~~~~~~   80 (181)
T PF08659_consen    2 TYLITGGLGGLGQSLARWLAERGARRLILLGRSGAPSAEAEAAIRELESAGA-RVEYVQCDVTDPEAVAAALAQLRQRFG   80 (181)
T ss_dssp             EEEEETTTSHHHHHHHHHHHHTT-SEEEEEESSGGGSTTHHHHHHHHHHTT--EEEEEE--TTSHHHHHHHHHTSHTTSS
T ss_pred             EEEEECCccHHHHHHHHHHHHcCCCEEEEeccCCCccHHHHHHHHHHHhCCC-ceeeeccCccCHHHHHHHHHHHHhccC
Confidence            789999999999999999999987 899999983   344567777877654 899999999999999999999999999


Q ss_pred             CccEEEEccccCCcccccccCChHHHHHHHHhhhHHHHHHHHHHhhhhhhcCCeEEEEcCccccccCCCCccchHHHHHH
Q 044010          125 RLDHLVNNAGISSVALFEDIVNITDFKQIMNINFWGSVYTTRFAVPHLRYTKGKIVVLSSAASWLTAPRMSFYNASKAAL  204 (248)
Q Consensus       125 ~id~vv~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~g~iV~isS~~~~~~~~~~~~Y~~sKaal  204 (248)
                      +++.+||+||......+.+ .+.++++..+..++.+.+++.+.+.+.   .-..+|.+||..+..+.++...|+++.+.+
T Consensus        81 ~i~gVih~ag~~~~~~~~~-~t~~~~~~~~~~Kv~g~~~L~~~~~~~---~l~~~i~~SSis~~~G~~gq~~YaaAN~~l  156 (181)
T PF08659_consen   81 PIDGVIHAAGVLADAPIQD-QTPDEFDAVLAPKVRGLWNLHEALENR---PLDFFILFSSISSLLGGPGQSAYAAANAFL  156 (181)
T ss_dssp             -EEEEEE-------B-GCC---HHHHHHHHHHHHHHHHHHHHHHTTT---TTSEEEEEEEHHHHTT-TTBHHHHHHHHHH
T ss_pred             Ccceeeeeeeeeccccccc-CCHHHHHHHHhhhhhHHHHHHHHhhcC---CCCeEEEECChhHhccCcchHhHHHHHHHH
Confidence            9999999999987776666 578999999999999999999988752   336899999999999999999999999999


Q ss_pred             HHHHHHHHHHhCCCeEEEEEecCccc
Q 044010          205 VLFFETLRVELGSDVGVTIVTPGFIE  230 (248)
Q Consensus       205 ~~l~~~la~~~~~~i~v~~v~pg~v~  230 (248)
                      +.+++..+..   +.++.+|+.|+++
T Consensus       157 da~a~~~~~~---g~~~~sI~wg~W~  179 (181)
T PF08659_consen  157 DALARQRRSR---GLPAVSINWGAWD  179 (181)
T ss_dssp             HHHHHHHHHT---TSEEEEEEE-EBS
T ss_pred             HHHHHHHHhC---CCCEEEEEccccC
Confidence            9999987654   3568889988765

It uses NADPH to reduce the keto group to a hydroxy group. ; PDB: 3QP9_D 2FR0_A 2FR1_A 2Z5L_A 3SLK_B 3MJE_B 3MJC_A 3MJT_B 3MJV_A 3MJS_B ....

>KOG1478 consensus 3-keto sterol reductase [Lipid transport and metabolism]

Probab=99.90  E-value=1.9e-22  Score=163.90  Aligned_cols=193  Identities=23%  Similarity=0.298  Sum_probs=164.0

Q ss_pred             CCCEEEEcCCCChHHHHHHHHHHHcC-----CeEEEEeCCcchHHHHHHHHHhhCCC---cEEEEEccCCCHHHHHHHHH
Q 044010           46 SGKVVIITGASSGIGEHLAYEYARRG-----ACLALCARREKSLEEVADTAREIGSP---DVITIRADVSKVDDCRSLVE  117 (248)
Q Consensus        46 ~~k~~lVtGg~~gIG~aia~~l~~~G-----~~V~l~~r~~~~~~~~~~~l~~~~~~---~v~~~~~D~~~~~~~~~~~~  117 (248)
                      -.|++||||+++|||.++|++|++..     .++++++|+-++.+++...+++..++   ++.++.+|+++..|+..+..
T Consensus         2 ~RKvalITGanSglGl~i~~RLl~~~De~~~ltl~ltcR~~~kae~vc~~lk~f~p~~~i~~~yvlvD~sNm~Sv~~A~~   81 (341)
T KOG1478|consen    2 MRKVALITGANSGLGLAICKRLLAEDDENVRLTLCLTCRNMSKAEAVCAALKAFHPKSTIEVTYVLVDVSNMQSVFRASK   81 (341)
T ss_pred             CceEEEEecCCCcccHHHHHHHHhccCCceeEEEEEEeCChhHHHHHHHHHHHhCCCceeEEEEEEEehhhHHHHHHHHH
Confidence            35899999999999999999999864     35899999999999999998887652   57899999999999999999


Q ss_pred             HHHhHcCCccEEEEccccCCcccc--------------------------cccCChHHHHHHHHhhhHHHHHHHHHHhhh
Q 044010          118 ETMNHFGRLDHLVNNAGISSVALF--------------------------EDIVNITDFKQIMNINFWGSVYTTRFAVPH  171 (248)
Q Consensus       118 ~~~~~~g~id~vv~~ag~~~~~~~--------------------------~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~  171 (248)
                      ++.++|.++|.++.|||..+...+                          ....+.+++..+|++|++|++.+.+.+.|+
T Consensus        82 di~~rf~~ld~iylNAg~~~~~gi~w~~avf~~fsnpv~amt~pt~~~~t~G~is~D~lg~iFetnVFGhfyli~~l~pl  161 (341)
T KOG1478|consen   82 DIKQRFQRLDYIYLNAGIMPNPGINWKAAVFGLFSNPVIAMTSPTEGLLTQGKISADGLGEIFETNVFGHFYLIRELEPL  161 (341)
T ss_pred             HHHHHhhhccEEEEccccCCCCcccHHHHHHHHhhchhHHhcCchhhhhhcceecccchhhHhhhcccchhhhHhhhhhH
Confidence            999999999999999998753221                          112356889999999999999999999999


Q ss_pred             hhhcCC-eEEEEcCccccccC---------CCCccchHHHHHHHHHHHHHHHHhCC-CeEEEEEecCccccCcccccc
Q 044010          172 LRYTKG-KIVVLSSAASWLTA---------PRMSFYNASKAALVLFFETLRVELGS-DVGVTIVTPGFIESELTQGKF  238 (248)
Q Consensus       172 ~~~~~g-~iV~isS~~~~~~~---------~~~~~Y~~sKaal~~l~~~la~~~~~-~i~v~~v~pg~v~T~~~~~~~  238 (248)
                      +-.++. .+|.+||..+....         .+-.+|..||.+.+-|.-++-+.+.+ ++-.++++||..-|.+.....
T Consensus       162 l~~~~~~~lvwtSS~~a~kk~lsleD~q~~kg~~pY~sSKrl~DlLh~A~~~~~~~~g~~qyvv~pg~~tt~~~~~~l  239 (341)
T KOG1478|consen  162 LCHSDNPQLVWTSSRMARKKNLSLEDFQHSKGKEPYSSSKRLTDLLHVALNRNFKPLGINQYVVQPGIFTTNSFSEYL  239 (341)
T ss_pred             hhcCCCCeEEEEeecccccccCCHHHHhhhcCCCCcchhHHHHHHHHHHHhccccccchhhhcccCceeecchhhhhh
Confidence            875554 89999998775432         35568999999999999999999987 599999999999998876543

>PRK13656 trans-2-enoyl-CoA reductase; Provisional

Probab=99.89  E-value=1.3e-21  Score=170.50  Aligned_cols=188  Identities=17%  Similarity=0.105  Sum_probs=143.5

Q ss_pred             CCCCEEEEcCCCChHHHH--HHHHHHHcCCeEEEEeCCcchH------------HHHHHHHHhhCCCcEEEEEccCCCHH
Q 044010           45 VSGKVVIITGASSGIGEH--LAYEYARRGACLALCARREKSL------------EEVADTAREIGSPDVITIRADVSKVD  110 (248)
Q Consensus        45 ~~~k~~lVtGg~~gIG~a--ia~~l~~~G~~V~l~~r~~~~~------------~~~~~~l~~~~~~~v~~~~~D~~~~~  110 (248)
                      -.+|++||||+++|||.+  +|+.| ++|++++++++..++.            +...+.+++.+ ..+..+.||+++.+
T Consensus        39 ~ggK~aLVTGaSsGIGlA~~IA~al-~~GA~Vi~v~~~~~~~~~~~~tagwy~~~a~~~~a~~~G-~~a~~i~~DVss~E  116 (398)
T PRK13656         39 NGPKKVLVIGASSGYGLASRIAAAF-GAGADTLGVFFEKPGTEKKTGTAGWYNSAAFDKFAKAAG-LYAKSINGDAFSDE  116 (398)
T ss_pred             CCCCEEEEECCCchHhHHHHHHHHH-HcCCeEEEEecCcchhhhcccccccchHHHHHHHHHhcC-CceEEEEcCCCCHH
Confidence            457999999999999999  89999 9999988888643221            12333444433 36778999999999


Q ss_pred             HHHHHHHHHHhHcCCccEEEEccccCCcccc-----------------c----c------------cCChHHHHHHHHhh
Q 044010          111 DCRSLVEETMNHFGRLDHLVNNAGISSVALF-----------------E----D------------IVNITDFKQIMNIN  157 (248)
Q Consensus       111 ~~~~~~~~~~~~~g~id~vv~~ag~~~~~~~-----------------~----~------------~~~~~~~~~~~~~n  157 (248)
                      +++++++++.+++|++|++|||+|...+..+                 .    +            ..+.++++.++.  
T Consensus       117 ~v~~lie~I~e~~G~IDiLVnSaA~~~r~~p~~g~~~~s~lKpi~~~~~~~~~d~~~~~i~~~s~~~~~~~ei~~Tv~--  194 (398)
T PRK13656        117 IKQKVIELIKQDLGQVDLVVYSLASPRRTDPKTGEVYRSVLKPIGEPYTGKTLDTDKDVIIEVTVEPATEEEIADTVK--  194 (398)
T ss_pred             HHHHHHHHHHHhcCCCCEEEECCccCCCCCcccCceeecccccccccccCCcccccccceeEEEEeeCCHHHHHHHHH--
Confidence            9999999999999999999999998744221                 0    0            122345555433  


Q ss_pred             hHHH---HHHHH--HHhhhhhhcCCeEEEEcCccccccCCCC--ccchHHHHHHHHHHHHHHHHhCCC-eEEEEEecCcc
Q 044010          158 FWGS---VYTTR--FAVPHLRYTKGKIVVLSSAASWLTAPRM--SFYNASKAALVLFFETLRVELGSD-VGVTIVTPGFI  229 (248)
Q Consensus       158 ~~~~---~~l~~--~~~~~~~~~~g~iV~isS~~~~~~~~~~--~~Y~~sKaal~~l~~~la~~~~~~-i~v~~v~pg~v  229 (248)
                      ++|.   ...++  ...+.|. .++++|..|+..+...+|.|  ...|.+|++|+.-++.|+.++++. +|+|++++|++
T Consensus       195 vMggedw~~Wi~al~~a~lla-~g~~~va~TY~G~~~t~p~Y~~g~mG~AKa~LE~~~r~La~~L~~~giran~i~~g~~  273 (398)
T PRK13656        195 VMGGEDWELWIDALDEAGVLA-EGAKTVAYSYIGPELTHPIYWDGTIGKAKKDLDRTALALNEKLAAKGGDAYVSVLKAV  273 (398)
T ss_pred             hhccchHHHHHHHHHhccccc-CCcEEEEEecCCcceeecccCCchHHHHHHHHHHHHHHHHHHhhhcCCEEEEEecCcc
Confidence            3333   23333  3344554 67899999998888888877  488999999999999999999884 99999999999


Q ss_pred             ccCccccc
Q 044010          230 ESELTQGK  237 (248)
Q Consensus       230 ~T~~~~~~  237 (248)
                      .|.-...+
T Consensus       274 ~T~Ass~I  281 (398)
T PRK13656        274 VTQASSAI  281 (398)
T ss_pred             cchhhhcC
Confidence            99876654

>TIGR03589 PseB UDP-N-acetylglucosamine 4,6-dehydratase

Probab=99.89  E-value=2e-21  Score=169.42  Aligned_cols=167  Identities=18%  Similarity=0.204  Sum_probs=132.1

Q ss_pred             CCCCEEEEcCCCChHHHHHHHHHHHcC--CeEEEEeCCcchHHHHHHHHHhhCCCcEEEEEccCCCHHHHHHHHHHHHhH
Q 044010           45 VSGKVVIITGASSGIGEHLAYEYARRG--ACLALCARREKSLEEVADTAREIGSPDVITIRADVSKVDDCRSLVEETMNH  122 (248)
Q Consensus        45 ~~~k~~lVtGg~~gIG~aia~~l~~~G--~~V~l~~r~~~~~~~~~~~l~~~~~~~v~~~~~D~~~~~~~~~~~~~~~~~  122 (248)
                      ++||++|||||+|+||.+++++|+++|  ++|++.+|+..+.+...+.+   ...++.++.+|++|.+++.++++     
T Consensus         2 ~~~k~vLVTGatG~IG~~l~~~L~~~g~~~~V~~~~r~~~~~~~~~~~~---~~~~~~~v~~Dl~d~~~l~~~~~-----   73 (324)
T TIGR03589         2 FNNKSILITGGTGSFGKAFISRLLENYNPKKIIIYSRDELKQWEMQQKF---PAPCLRFFIGDVRDKERLTRALR-----   73 (324)
T ss_pred             cCCCEEEEeCCCCHHHHHHHHHHHHhCCCcEEEEEcCChhHHHHHHHHh---CCCcEEEEEccCCCHHHHHHHHh-----
Confidence            468999999999999999999999986  68999998765443333322   12368899999999999888764     


Q ss_pred             cCCccEEEEccccCCcccccccCChHHHHHHHHhhhHHHHHHHHHHhhhhhhcCCeEEEEcCccccccCCCCccchHHHH
Q 044010          123 FGRLDHLVNNAGISSVALFEDIVNITDFKQIMNINFWGSVYTTRFAVPHLRYTKGKIVVLSSAASWLTAPRMSFYNASKA  202 (248)
Q Consensus       123 ~g~id~vv~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~g~iV~isS~~~~~~~~~~~~Y~~sKa  202 (248)
                        ++|++||+||..... .    ...+..+.+++|+.+++++++++.+.   ..+++|++||.....|   ..+|++||+
T Consensus        74 --~iD~Vih~Ag~~~~~-~----~~~~~~~~~~~Nv~g~~~ll~aa~~~---~~~~iV~~SS~~~~~p---~~~Y~~sK~  140 (324)
T TIGR03589        74 --GVDYVVHAAALKQVP-A----AEYNPFECIRTNINGAQNVIDAAIDN---GVKRVVALSTDKAANP---INLYGATKL  140 (324)
T ss_pred             --cCCEEEECcccCCCc-h----hhcCHHHHHHHHHHHHHHHHHHHHHc---CCCEEEEEeCCCCCCC---CCHHHHHHH
Confidence              599999999975321 1    11223578999999999999998743   3369999999765443   467999999


Q ss_pred             HHHHHHHHHHHHhCC-CeEEEEEecCccccC
Q 044010          203 ALVLFFETLRVELGS-DVGVTIVTPGFIESE  232 (248)
Q Consensus       203 al~~l~~~la~~~~~-~i~v~~v~pg~v~T~  232 (248)
                      +.+.+++.++.+++. +++++++.||.+..+
T Consensus       141 ~~E~l~~~~~~~~~~~gi~~~~lR~g~v~G~  171 (324)
T TIGR03589       141 ASDKLFVAANNISGSKGTRFSVVRYGNVVGS  171 (324)
T ss_pred             HHHHHHHHHHhhccccCcEEEEEeecceeCC
Confidence            999999999887765 599999999999875

This enzyme catalyzes the first step in the biosynthesis of pseudaminic acid, the conversion of UDP-N-acetylglucosamine to UDP-4-keto-6-deoxy-N-acetylglucosamine. These sequences are members of the broader pfam01073 (3-beta hydroxysteroid dehydrogenase/isomerase family) family.

>TIGR02622 CDP_4_6_dhtase CDP-glucose 4,6-dehydratase

Probab=99.87  E-value=1e-20  Score=166.50  Aligned_cols=175  Identities=15%  Similarity=0.114  Sum_probs=136.9

Q ss_pred             CCCCEEEEcCCCChHHHHHHHHHHHcCCeEEEEeCCcchHHHHHHHHHhhCCCcEEEEEccCCCHHHHHHHHHHHHhHcC
Q 044010           45 VSGKVVIITGASSGIGEHLAYEYARRGACLALCARREKSLEEVADTAREIGSPDVITIRADVSKVDDCRSLVEETMNHFG  124 (248)
Q Consensus        45 ~~~k~~lVtGg~~gIG~aia~~l~~~G~~V~l~~r~~~~~~~~~~~l~~~~~~~v~~~~~D~~~~~~~~~~~~~~~~~~g  124 (248)
                      ++||++|||||+|+||.+++++|+++|++|++++|+........+.+.. . .++.++.+|++|.+++.+++++.     
T Consensus         2 ~~~k~ilItGatG~IG~~l~~~L~~~G~~V~~~~r~~~~~~~~~~~~~~-~-~~~~~~~~Dl~~~~~~~~~~~~~-----   74 (349)
T TIGR02622         2 WQGKKVLVTGHTGFKGSWLSLWLLELGAEVYGYSLDPPTSPNLFELLNL-A-KKIEDHFGDIRDAAKLRKAIAEF-----   74 (349)
T ss_pred             cCCCEEEEECCCChhHHHHHHHHHHCCCEEEEEeCCCccchhHHHHHhh-c-CCceEEEccCCCHHHHHHHHhhc-----
Confidence            4689999999999999999999999999999999987654433332321 2 25778899999999999988864     


Q ss_pred             CccEEEEccccCCcccccccCChHHHHHHHHhhhHHHHHHHHHHhhhhhhcCCeEEEEcCccccc------------cCC
Q 044010          125 RLDHLVNNAGISSVALFEDIVNITDFKQIMNINFWGSVYTTRFAVPHLRYTKGKIVVLSSAASWL------------TAP  192 (248)
Q Consensus       125 ~id~vv~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~g~iV~isS~~~~~------------~~~  192 (248)
                      ++|++||+||.....     .+.+++...+++|+.++.++++++...  ...+++|++||...+.            +..
T Consensus        75 ~~d~vih~A~~~~~~-----~~~~~~~~~~~~N~~g~~~ll~a~~~~--~~~~~iv~~SS~~vyg~~~~~~~~~e~~~~~  147 (349)
T TIGR02622        75 KPEIVFHLAAQPLVR-----KSYADPLETFETNVMGTVNLLEAIRAI--GSVKAVVNVTSDKCYRNDEWVWGYRETDPLG  147 (349)
T ss_pred             CCCEEEECCcccccc-----cchhCHHHHHHHhHHHHHHHHHHHHhc--CCCCEEEEEechhhhCCCCCCCCCccCCCCC
Confidence            699999999954321     234667788999999999999987532  1146899999965432            113


Q ss_pred             CCccchHHHHHHHHHHHHHHHHhCC-----CeEEEEEecCccccCc
Q 044010          193 RMSFYNASKAALVLFFETLRVELGS-----DVGVTIVTPGFIESEL  233 (248)
Q Consensus       193 ~~~~Y~~sKaal~~l~~~la~~~~~-----~i~v~~v~pg~v~T~~  233 (248)
                      +..+|++||.+.+.+++.++.++.+     +++++++.|+.+..|-
T Consensus       148 p~~~Y~~sK~~~e~~~~~~~~~~~~~~~~~~i~~~~lR~~~vyGp~  193 (349)
T TIGR02622       148 GHDPYSSSKACAELVIASYRSSFFGVANFHGIKIASARAGNVIGGG  193 (349)
T ss_pred             CCCcchhHHHHHHHHHHHHHHHhhcccccCCCcEEEEccCcccCCC
Confidence            3568999999999999999988743     6999999999998763

Members of this protein family are CDP-glucose 4,6-dehydratase from a variety of Gram-negative and Gram-positive bacteria. Members typically are encoded next to a gene that encodes a glucose-1-phosphate cytidylyltransferase, which produces the substrate, CDP-D-glucose, used by this enzyme to produce CDP-4-keto-6-deoxyglucose.

>PLN02989 cinnamyl-alcohol dehydrogenase family protein

Probab=99.86  E-value=6.6e-20  Score=159.61  Aligned_cols=174  Identities=18%  Similarity=0.232  Sum_probs=135.5

Q ss_pred             CCCEEEEcCCCChHHHHHHHHHHHcCCeEEEEeCCcchHHHHHHHHHhhC-CCcEEEEEccCCCHHHHHHHHHHHHhHcC
Q 044010           46 SGKVVIITGASSGIGEHLAYEYARRGACLALCARREKSLEEVADTAREIG-SPDVITIRADVSKVDDCRSLVEETMNHFG  124 (248)
Q Consensus        46 ~~k~~lVtGg~~gIG~aia~~l~~~G~~V~l~~r~~~~~~~~~~~l~~~~-~~~v~~~~~D~~~~~~~~~~~~~~~~~~g  124 (248)
                      ++|++|||||+|+||.+++++|+++|++|++++|+....+.........+ ..++.++.+|++|.++++++++       
T Consensus         4 ~~k~vlVtG~~G~IG~~l~~~L~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~D~~d~~~~~~~~~-------   76 (325)
T PLN02989          4 GGKVVCVTGASGYIASWIVKLLLFRGYTINATVRDPKDRKKTDHLLALDGAKERLKLFKADLLDEGSFELAID-------   76 (325)
T ss_pred             CCCEEEEECCchHHHHHHHHHHHHCCCEEEEEEcCCcchhhHHHHHhccCCCCceEEEeCCCCCchHHHHHHc-------
Confidence            47999999999999999999999999999999998765544332222111 2368889999999998888775       


Q ss_pred             CccEEEEccccCCcccccccCChHHHHHHHHhhhHHHHHHHHHHhhhhhhcCCeEEEEcCccccccCC------------
Q 044010          125 RLDHLVNNAGISSVALFEDIVNITDFKQIMNINFWGSVYTTRFAVPHLRYTKGKIVVLSSAASWLTAP------------  192 (248)
Q Consensus       125 ~id~vv~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~g~iV~isS~~~~~~~~------------  192 (248)
                      ++|++||+||.....     .+.+++.+.+++|+.+++++++++.+.+  ..++||++||.+++.+..            
T Consensus        77 ~~d~vih~A~~~~~~-----~~~~~~~~~~~~n~~g~~~ll~a~~~~~--~~~~iv~~SS~~~~~~~~~~~~~~~~~~E~  149 (325)
T PLN02989         77 GCETVFHTASPVAIT-----VKTDPQVELINPAVNGTINVLRTCTKVS--SVKRVILTSSMAAVLAPETKLGPNDVVDET  149 (325)
T ss_pred             CCCEEEEeCCCCCCC-----CCCChHHHHHHHHHHHHHHHHHHHHHcC--CceEEEEecchhheecCCccCCCCCccCcC
Confidence            589999999964321     2335678899999999999999987653  246999999987653311            


Q ss_pred             ----------CCccchHHHHHHHHHHHHHHHHhCCCeEEEEEecCccccCccc
Q 044010          193 ----------RMSFYNASKAALVLFFETLRVELGSDVGVTIVTPGFIESELTQ  235 (248)
Q Consensus       193 ----------~~~~Y~~sKaal~~l~~~la~~~~~~i~v~~v~pg~v~T~~~~  235 (248)
                                ....|+.||.+.+.+++.+++++  ++.+..+.|+.+..|...
T Consensus       150 ~~~~p~~~~~~~~~Y~~sK~~~E~~~~~~~~~~--~~~~~ilR~~~vyGp~~~  200 (325)
T PLN02989        150 FFTNPSFAEERKQWYVLSKTLAEDAAWRFAKDN--EIDLIVLNPGLVTGPILQ  200 (325)
T ss_pred             CCCchhHhcccccchHHHHHHHHHHHHHHHHHc--CCeEEEEcCCceeCCCCC
Confidence                      02469999999999999988776  478888999999887543

>PRK06720 hypothetical protein; Provisional

Probab=99.85  E-value=7.7e-20  Score=144.82  Aligned_cols=143  Identities=20%  Similarity=0.288  Sum_probs=114.9

Q ss_pred             ccCCCCCEEEEcCCCChHHHHHHHHHHHcCCeEEEEeCCcchHHHHHHHHHhhCCCcEEEEEccCCCHHHHHHHHHHHHh
Q 044010           42 SEDVSGKVVIITGASSGIGEHLAYEYARRGACLALCARREKSLEEVADTAREIGSPDVITIRADVSKVDDCRSLVEETMN  121 (248)
Q Consensus        42 ~~~~~~k~~lVtGg~~gIG~aia~~l~~~G~~V~l~~r~~~~~~~~~~~l~~~~~~~v~~~~~D~~~~~~~~~~~~~~~~  121 (248)
                      .+++++|+++||||++|||.++++.|+++|++|++++|+.+..++..+++...+. +..++.+|+++.++++++++++.+
T Consensus        11 ~~~l~gk~~lVTGa~~GIG~aia~~l~~~G~~V~l~~r~~~~~~~~~~~l~~~~~-~~~~~~~Dl~~~~~v~~~v~~~~~   89 (169)
T PRK06720         11 KMKLAGKVAIVTGGGIGIGRNTALLLAKQGAKVIVTDIDQESGQATVEEITNLGG-EALFVSYDMEKQGDWQRVISITLN   89 (169)
T ss_pred             ccccCCCEEEEecCCChHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHhcCC-cEEEEEccCCCHHHHHHHHHHHHH
Confidence            3567899999999999999999999999999999999998777777777764443 677889999999999999999999


Q ss_pred             HcCCccEEEEccccCCcccccccCChHHHHHHHHhhhHHHHHHHHHHhhhhhhc--------CCeEEEEcCcccc
Q 044010          122 HFGRLDHLVNNAGISSVALFEDIVNITDFKQIMNINFWGSVYTTRFAVPHLRYT--------KGKIVVLSSAASW  188 (248)
Q Consensus       122 ~~g~id~vv~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~--------~g~iV~isS~~~~  188 (248)
                      ++|++|++|||||.....+.....+.++ ++  ..|+.+.+...+.+.+.|.++        .|++..+||.+..
T Consensus        90 ~~G~iDilVnnAG~~~~~~~~~~~~~~~-~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  161 (169)
T PRK06720         90 AFSRIDMLFQNAGLYKIDSIFSRQQEND-SN--VLCINDVWIEIKQLTSSFMKQQEEVVLSDLPIFGIIGTKGQS  161 (169)
T ss_pred             HcCCCCEEEECCCcCCCCCcccccchhH-hh--ceeccHHHHHHHHHHHHHHhcCCEEEeecCceeeEecccccc
Confidence            9999999999999876554444334344 44  667777788888888876533        2678888876543

>PLN03209 translocon at the inner envelope of chloroplast subunit 62; Provisional

Probab=99.84  E-value=1.9e-19  Score=164.57  Aligned_cols=172  Identities=16%  Similarity=0.233  Sum_probs=134.2

Q ss_pred             CCCCEEEEcCCCChHHHHHHHHHHHcCCeEEEEeCCcchHHHHHHHHHhh-----C---CCcEEEEEccCCCHHHHHHHH
Q 044010           45 VSGKVVIITGASSGIGEHLAYEYARRGACLALCARREKSLEEVADTAREI-----G---SPDVITIRADVSKVDDCRSLV  116 (248)
Q Consensus        45 ~~~k~~lVtGg~~gIG~aia~~l~~~G~~V~l~~r~~~~~~~~~~~l~~~-----~---~~~v~~~~~D~~~~~~~~~~~  116 (248)
                      .+||+++||||+|+||++++++|+++|++|++++|+.++.+...+++.+.     +   ..++.++.+|++|.+++.++ 
T Consensus        78 ~~gKvVLVTGATGgIG~aLAr~LLk~G~~Vval~Rn~ekl~~l~~~l~~~~L~~~Ga~~~~~v~iV~gDLtD~esI~~a-  156 (576)
T PLN03209         78 KDEDLAFVAGATGKVGSRTVRELLKLGFRVRAGVRSAQRAESLVQSVKQMKLDVEGTQPVEKLEIVECDLEKPDQIGPA-  156 (576)
T ss_pred             CCCCEEEEECCCCHHHHHHHHHHHHCCCeEEEEeCCHHHHHHHHHHhhhhccccccccccCceEEEEecCCCHHHHHHH-
Confidence            47899999999999999999999999999999999988877766655431     1   12578999999999887654 


Q ss_pred             HHHHhHcCCccEEEEccccCCcccccccCChHHHHHHHHhhhHHHHHHHHHHhhhhhhcCCeEEEEcCcccc-ccCCCCc
Q 044010          117 EETMNHFGRLDHLVNNAGISSVALFEDIVNITDFKQIMNINFWGSVYTTRFAVPHLRYTKGKIVVLSSAASW-LTAPRMS  195 (248)
Q Consensus       117 ~~~~~~~g~id~vv~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~g~iV~isS~~~~-~~~~~~~  195 (248)
                            ++++|+||||+|....       ...++...+.+|+.+..++++++.+.   ..++||++||.++. .+.+. .
T Consensus       157 ------LggiDiVVn~AG~~~~-------~v~d~~~~~~VN~~Gt~nLl~Aa~~a---gVgRIV~VSSiga~~~g~p~-~  219 (576)
T PLN03209        157 ------LGNASVVICCIGASEK-------EVFDVTGPYRIDYLATKNLVDAATVA---KVNHFILVTSLGTNKVGFPA-A  219 (576)
T ss_pred             ------hcCCCEEEEccccccc-------cccchhhHHHHHHHHHHHHHHHHHHh---CCCEEEEEccchhcccCccc-c
Confidence                  3589999999987531       12356788899999999999987532   34799999998764 23222 2


Q ss_pred             cchHHHHHHHHHHHHHHHHhCC-CeEEEEEecCccccCccc
Q 044010          196 FYNASKAALVLFFETLRVELGS-DVGVTIVTPGFIESELTQ  235 (248)
Q Consensus       196 ~Y~~sKaal~~l~~~la~~~~~-~i~v~~v~pg~v~T~~~~  235 (248)
                      .|. +|.++..+.+.+..++.. +|+++.|+||++.|++..
T Consensus       220 ~~~-sk~~~~~~KraaE~~L~~sGIrvTIVRPG~L~tp~d~  259 (576)
T PLN03209        220 ILN-LFWGVLCWKRKAEEALIASGLPYTIVRPGGMERPTDA  259 (576)
T ss_pred             chh-hHHHHHHHHHHHHHHHHHcCCCEEEEECCeecCCccc
Confidence            243 788888888888888865 599999999999988654

>PLN02653 GDP-mannose 4,6-dehydratase

Probab=99.83  E-value=1.5e-19  Score=158.38  Aligned_cols=178  Identities=19%  Similarity=0.112  Sum_probs=131.4

Q ss_pred             cCCCCCEEEEcCCCChHHHHHHHHHHHcCCeEEEEeCCcchHH-HHHHHHHh---hCCCcEEEEEccCCCHHHHHHHHHH
Q 044010           43 EDVSGKVVIITGASSGIGEHLAYEYARRGACLALCARREKSLE-EVADTARE---IGSPDVITIRADVSKVDDCRSLVEE  118 (248)
Q Consensus        43 ~~~~~k~~lVtGg~~gIG~aia~~l~~~G~~V~l~~r~~~~~~-~~~~~l~~---~~~~~v~~~~~D~~~~~~~~~~~~~  118 (248)
                      .|.++|++|||||+|+||.+++++|+++|++|++++|+.+... ...+.+..   ..+.++.++.+|++|.+++.++++.
T Consensus         2 ~~~~~~~vlVTGatGfiG~~l~~~L~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~~~~~~~~   81 (340)
T PLN02653          2 GDPPRKVALITGITGQDGSYLTEFLLSKGYEVHGIIRRSSNFNTQRLDHIYIDPHPNKARMKLHYGDLSDASSLRRWLDD   81 (340)
T ss_pred             CCCCCCEEEEECCCCccHHHHHHHHHHCCCEEEEEecccccccccchhhhccccccccCceEEEEecCCCHHHHHHHHHH
Confidence            5788999999999999999999999999999999998754211 11122211   1123688999999999999998886


Q ss_pred             HHhHcCCccEEEEccccCCcccccccCChHHHHHHHHhhhHHHHHHHHHHhhhhhhcC--CeEEEEcCccccccC-----
Q 044010          119 TMNHFGRLDHLVNNAGISSVALFEDIVNITDFKQIMNINFWGSVYTTRFAVPHLRYTK--GKIVVLSSAASWLTA-----  191 (248)
Q Consensus       119 ~~~~~g~id~vv~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~--g~iV~isS~~~~~~~-----  191 (248)
                      .     ++|+|||+||......     ..++.+..+++|+.++.++++.+.+...+++  -++|++||...+...     
T Consensus        82 ~-----~~d~Vih~A~~~~~~~-----~~~~~~~~~~~N~~gt~~ll~~~~~~~~~~~~~~~~v~~Ss~~vyg~~~~~~~  151 (340)
T PLN02653         82 I-----KPDEVYNLAAQSHVAV-----SFEMPDYTADVVATGALRLLEAVRLHGQETGRQIKYYQAGSSEMYGSTPPPQS  151 (340)
T ss_pred             c-----CCCEEEECCcccchhh-----hhhChhHHHHHHHHHHHHHHHHHHHhccccccceeEEEeccHHHhCCCCCCCC
Confidence            4     5999999999754321     2244567789999999999999988754321  278888886543321     


Q ss_pred             -----CCCccchHHHHHHHHHHHHHHHHhCCC----eEEEEEecCccc
Q 044010          192 -----PRMSFYNASKAALVLFFETLRVELGSD----VGVTIVTPGFIE  230 (248)
Q Consensus       192 -----~~~~~Y~~sKaal~~l~~~la~~~~~~----i~v~~v~pg~v~  230 (248)
                           .+...|+.||.+.+.+++.++.+++-.    +.+|.+.|+.-.
T Consensus       152 E~~~~~p~~~Y~~sK~~~e~~~~~~~~~~~~~~~~~~~~~~~gp~~~~  199 (340)
T PLN02653        152 ETTPFHPRSPYAVAKVAAHWYTVNYREAYGLFACNGILFNHESPRRGE  199 (340)
T ss_pred             CCCCCCCCChhHHHHHHHHHHHHHHHHHcCCeEEEeeeccccCCCCCc
Confidence                 135579999999999999999887531    445566676543

>PLN02986 cinnamyl-alcohol dehydrogenase family protein

Probab=99.83  E-value=9e-19  Score=152.37  Aligned_cols=174  Identities=18%  Similarity=0.204  Sum_probs=132.3

Q ss_pred             CCCCEEEEcCCCChHHHHHHHHHHHcCCeEEEEeCCcchHHHHHHHHHhhC-CCcEEEEEccCCCHHHHHHHHHHHHhHc
Q 044010           45 VSGKVVIITGASSGIGEHLAYEYARRGACLALCARREKSLEEVADTAREIG-SPDVITIRADVSKVDDCRSLVEETMNHF  123 (248)
Q Consensus        45 ~~~k~~lVtGg~~gIG~aia~~l~~~G~~V~l~~r~~~~~~~~~~~l~~~~-~~~v~~~~~D~~~~~~~~~~~~~~~~~~  123 (248)
                      -.||+++||||+|+||.+++++|+++|++|+++.|+..+.+...+.....+ ..++.++.+|+++.++++++++      
T Consensus         3 ~~~~~vlVTGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~------   76 (322)
T PLN02986          3 GGGKLVCVTGASGYIASWIVKLLLLRGYTVKATVRDLTDRKKTEHLLALDGAKERLKLFKADLLEESSFEQAIE------   76 (322)
T ss_pred             CCCCEEEEECCCcHHHHHHHHHHHHCCCEEEEEECCCcchHHHHHHHhccCCCCceEEEecCCCCcchHHHHHh------
Confidence            468999999999999999999999999999988998765544333222111 2368889999999998888876      


Q ss_pred             CCccEEEEccccCCcccccccCChHHHHHHHHhhhHHHHHHHHHHhhhhhhcCCeEEEEcCccccc-cCC----------
Q 044010          124 GRLDHLVNNAGISSVALFEDIVNITDFKQIMNINFWGSVYTTRFAVPHLRYTKGKIVVLSSAASWL-TAP----------  192 (248)
Q Consensus       124 g~id~vv~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~g~iV~isS~~~~~-~~~----------  192 (248)
                       ++|++||+|+.....      ..+...+.+++|+.++.++++.+....  ..++||++||.+.+. +.+          
T Consensus        77 -~~d~vih~A~~~~~~------~~~~~~~~~~~nv~gt~~ll~~~~~~~--~v~rvV~~SS~~~~~~~~~~~~~~~~~~E  147 (322)
T PLN02986         77 -GCDAVFHTASPVFFT------VKDPQTELIDPALKGTINVLNTCKETP--SVKRVILTSSTAAVLFRQPPIEANDVVDE  147 (322)
T ss_pred             -CCCEEEEeCCCcCCC------CCCchhhhhHHHHHHHHHHHHHHHhcC--CccEEEEecchhheecCCccCCCCCCcCc
Confidence             589999999964321      112335678999999999999875321  225899999986532 110          


Q ss_pred             -----------CCccchHHHHHHHHHHHHHHHHhCCCeEEEEEecCccccCccc
Q 044010          193 -----------RMSFYNASKAALVLFFETLRVELGSDVGVTIVTPGFIESELTQ  235 (248)
Q Consensus       193 -----------~~~~Y~~sKaal~~l~~~la~~~~~~i~v~~v~pg~v~T~~~~  235 (248)
                                 ....|+.||.+.+.+++.+.+++  ++++..+.|+.+.+|...
T Consensus       148 ~~~~~p~~~~~~~~~Y~~sK~~aE~~~~~~~~~~--~~~~~~lrp~~v~Gp~~~  199 (322)
T PLN02986        148 TFFSDPSLCRETKNWYPLSKILAENAAWEFAKDN--GIDMVVLNPGFICGPLLQ  199 (322)
T ss_pred             ccCCChHHhhccccchHHHHHHHHHHHHHHHHHh--CCeEEEEcccceeCCCCC
Confidence                       12569999999999999988776  489999999999988643

>PLN00198 anthocyanidin reductase; Provisional

Probab=99.82  E-value=2e-18  Score=151.24  Aligned_cols=172  Identities=15%  Similarity=0.142  Sum_probs=129.3

Q ss_pred             CCCCCEEEEcCCCChHHHHHHHHHHHcCCeEEEEeCCcchHHHHHHHHHhh-CCCcEEEEEccCCCHHHHHHHHHHHHhH
Q 044010           44 DVSGKVVIITGASSGIGEHLAYEYARRGACLALCARREKSLEEVADTAREI-GSPDVITIRADVSKVDDCRSLVEETMNH  122 (248)
Q Consensus        44 ~~~~k~~lVtGg~~gIG~aia~~l~~~G~~V~l~~r~~~~~~~~~~~l~~~-~~~~v~~~~~D~~~~~~~~~~~~~~~~~  122 (248)
                      .+++|++|||||+|+||.+++++|+++|++|+++.|+.+....... +... ...++.++.+|++|.+++.++++     
T Consensus         6 ~~~~~~vlItG~~GfIG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~-~~~~~~~~~~~~~~~Dl~d~~~~~~~~~-----   79 (338)
T PLN00198          6 PTGKKTACVIGGTGFLASLLIKLLLQKGYAVNTTVRDPENQKKIAH-LRALQELGDLKIFGADLTDEESFEAPIA-----   79 (338)
T ss_pred             CCCCCeEEEECCchHHHHHHHHHHHHCCCEEEEEECCCCCHHHHHH-HHhcCCCCceEEEEcCCCChHHHHHHHh-----
Confidence            5678999999999999999999999999999988887654333221 1111 11257889999999988877664     


Q ss_pred             cCCccEEEEccccCCcccccccCChHHHHHHHHhhhHHHHHHHHHHhhhhhhcCCeEEEEcCccccccC-----------
Q 044010          123 FGRLDHLVNNAGISSVALFEDIVNITDFKQIMNINFWGSVYTTRFAVPHLRYTKGKIVVLSSAASWLTA-----------  191 (248)
Q Consensus       123 ~g~id~vv~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~g~iV~isS~~~~~~~-----------  191 (248)
                        ++|++||+|+.....      ..+.....+++|+.++.++++++.+..  ..+++|++||.+.+...           
T Consensus        80 --~~d~vih~A~~~~~~------~~~~~~~~~~~nv~g~~~ll~a~~~~~--~~~~~v~~SS~~~~g~~~~~~~~~~~~E  149 (338)
T PLN00198         80 --GCDLVFHVATPVNFA------SEDPENDMIKPAIQGVHNVLKACAKAK--SVKRVILTSSAAAVSINKLSGTGLVMNE  149 (338)
T ss_pred             --cCCEEEEeCCCCccC------CCChHHHHHHHHHHHHHHHHHHHHhcC--CccEEEEeecceeeeccCCCCCCceecc
Confidence              589999999853211      113345678999999999999986531  23699999998755321           


Q ss_pred             -------------CCCccchHHHHHHHHHHHHHHHHhCCCeEEEEEecCccccCc
Q 044010          192 -------------PRMSFYNASKAALVLFFETLRVELGSDVGVTIVTPGFIESEL  233 (248)
Q Consensus       192 -------------~~~~~Y~~sKaal~~l~~~la~~~~~~i~v~~v~pg~v~T~~  233 (248)
                                   ++..+|+.||.+.+.+++.++.++  ++++..+.|+.|..|-
T Consensus       150 ~~~~~~~~~~~~~~p~~~Y~~sK~~~E~~~~~~~~~~--~~~~~~~R~~~vyGp~  202 (338)
T PLN00198        150 KNWTDVEFLTSEKPPTWGYPASKTLAEKAAWKFAEEN--NIDLITVIPTLMAGPS  202 (338)
T ss_pred             ccCCchhhhhhcCCccchhHHHHHHHHHHHHHHHHhc--CceEEEEeCCceECCC
Confidence                         124469999999999999988875  4788888888887764

>PLN02896 cinnamyl-alcohol dehydrogenase

Probab=99.81  E-value=4e-18  Score=150.25  Aligned_cols=179  Identities=16%  Similarity=0.141  Sum_probs=133.7

Q ss_pred             cCCCCCEEEEcCCCChHHHHHHHHHHHcCCeEEEEeCCcchHHHHHHHHHhhCCCcEEEEEccCCCHHHHHHHHHHHHhH
Q 044010           43 EDVSGKVVIITGASSGIGEHLAYEYARRGACLALCARREKSLEEVADTAREIGSPDVITIRADVSKVDDCRSLVEETMNH  122 (248)
Q Consensus        43 ~~~~~k~~lVtGg~~gIG~aia~~l~~~G~~V~l~~r~~~~~~~~~~~l~~~~~~~v~~~~~D~~~~~~~~~~~~~~~~~  122 (248)
                      ...+++++|||||+|+||.+++++|+++|++|++++|+.++.+...+.+..  ..++.++.+|+++.+++.++++     
T Consensus         6 ~~~~~~~vLVtG~~GfIG~~l~~~L~~~G~~V~~~~r~~~~~~~~~~~~~~--~~~~~~~~~Dl~~~~~~~~~~~-----   78 (353)
T PLN02896          6 RESATGTYCVTGATGYIGSWLVKLLLQRGYTVHATLRDPAKSLHLLSKWKE--GDRLRLFRADLQEEGSFDEAVK-----   78 (353)
T ss_pred             cccCCCEEEEECCCcHHHHHHHHHHHHCCCEEEEEeCChHHHHHHHHhhcc--CCeEEEEECCCCCHHHHHHHHc-----
Confidence            356788999999999999999999999999999999987655544443332  2368889999999998877764     


Q ss_pred             cCCccEEEEccccCCcccccccCChHHH--HHHHHhhhHHHHHHHHHHhhhhhhcCCeEEEEcCccccccCC--------
Q 044010          123 FGRLDHLVNNAGISSVALFEDIVNITDF--KQIMNINFWGSVYTTRFAVPHLRYTKGKIVVLSSAASWLTAP--------  192 (248)
Q Consensus       123 ~g~id~vv~~ag~~~~~~~~~~~~~~~~--~~~~~~n~~~~~~l~~~~~~~~~~~~g~iV~isS~~~~~~~~--------  192 (248)
                        ++|+|||+|+...........+.+++  .+.+++|+.++.++++++.+..  ..+++|++||.+.+...+        
T Consensus        79 --~~d~Vih~A~~~~~~~~~~~~~~~~~~~~n~~~~~~~g~~~ll~~~~~~~--~~~~~v~~SS~~vyg~~~~~~~~~~~  154 (353)
T PLN02896         79 --GCDGVFHVAASMEFDVSSDHNNIEEYVQSKVIDPAIKGTLNVLKSCLKSK--TVKRVVFTSSISTLTAKDSNGRWRAV  154 (353)
T ss_pred             --CCCEEEECCccccCCccccccchhhhhhHHhHHHHHHHHHHHHHHHHhcC--CccEEEEEechhhccccccCCCCCCc
Confidence              58999999997654321111122332  4677888999999999986542  235899999976653110        


Q ss_pred             -----------------CCccchHHHHHHHHHHHHHHHHhCCCeEEEEEecCccccCcc
Q 044010          193 -----------------RMSFYNASKAALVLFFETLRVELGSDVGVTIVTPGFIESELT  234 (248)
Q Consensus       193 -----------------~~~~Y~~sKaal~~l~~~la~~~~~~i~v~~v~pg~v~T~~~  234 (248)
                                       ...+|+.||.+.+.+++.+++++  ++++..+.|+.+..|..
T Consensus       155 ~~E~~~~p~~~~~~~~~~~~~Y~~sK~~~E~~~~~~~~~~--~~~~~~lR~~~vyGp~~  211 (353)
T PLN02896        155 VDETCQTPIDHVWNTKASGWVYVLSKLLTEEAAFKYAKEN--GIDLVSVITTTVAGPFL  211 (353)
T ss_pred             cCcccCCcHHHhhccCCCCccHHHHHHHHHHHHHHHHHHc--CCeEEEEcCCcccCCCc
Confidence                             11379999999999999988876  48899999988777643

>PLN02572 UDP-sulfoquinovose synthase

Probab=99.80  E-value=5.5e-18  Score=153.57  Aligned_cols=180  Identities=16%  Similarity=0.132  Sum_probs=131.1

Q ss_pred             cCCCCCEEEEcCCCChHHHHHHHHHHHcCCeEEEEeCCcc---h----H---------HHHHHHHHhhCCCcEEEEEccC
Q 044010           43 EDVSGKVVIITGASSGIGEHLAYEYARRGACLALCARREK---S----L---------EEVADTAREIGSPDVITIRADV  106 (248)
Q Consensus        43 ~~~~~k~~lVtGg~~gIG~aia~~l~~~G~~V~l~~r~~~---~----~---------~~~~~~l~~~~~~~v~~~~~D~  106 (248)
                      .++++|++|||||+|+||.+++++|+++|++|++++|...   .    .         .+..+.+.+..+.++.++.+|+
T Consensus        43 ~~~~~k~VLVTGatGfIGs~Lv~~L~~~G~~V~~~d~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~v~~v~~Dl  122 (442)
T PLN02572         43 SSSKKKKVMVIGGDGYCGWATALHLSKRGYEVAIVDNLCRRLFDHQLGLDSLTPIASIHERVRRWKEVSGKEIELYVGDI  122 (442)
T ss_pred             ccccCCEEEEECCCcHHHHHHHHHHHHCCCeEEEEeccccccccccccccccccccchHHHHHHHHHhhCCcceEEECCC
Confidence            4678999999999999999999999999999999875321   0    0         0111112222223688999999


Q ss_pred             CCHHHHHHHHHHHHhHcCCccEEEEccccCCcccccccCChHHHHHHHHhhhHHHHHHHHHHhhhhhhcCCeEEEEcCcc
Q 044010          107 SKVDDCRSLVEETMNHFGRLDHLVNNAGISSVALFEDIVNITDFKQIMNINFWGSVYTTRFAVPHLRYTKGKIVVLSSAA  186 (248)
Q Consensus       107 ~~~~~~~~~~~~~~~~~g~id~vv~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~g~iV~isS~~  186 (248)
                      +|.++++++++..     ++|+|||+|+.....  ....+.++++..+++|+.++.++++.+...-  .+.++|++||.+
T Consensus       123 ~d~~~v~~~l~~~-----~~D~ViHlAa~~~~~--~~~~~~~~~~~~~~~Nv~gt~nlleaa~~~g--v~~~~V~~SS~~  193 (442)
T PLN02572        123 CDFEFLSEAFKSF-----EPDAVVHFGEQRSAP--YSMIDRSRAVFTQHNNVIGTLNVLFAIKEFA--PDCHLVKLGTMG  193 (442)
T ss_pred             CCHHHHHHHHHhC-----CCCEEEECCCcccCh--hhhcChhhHHHHHHHHHHHHHHHHHHHHHhC--CCccEEEEecce
Confidence            9999999988863     699999999764322  1112445677888999999999999876431  124899999976


Q ss_pred             cccc------------------------CCCCccchHHHHHHHHHHHHHHHHhCCCeEEEEEecCccccCc
Q 044010          187 SWLT------------------------APRMSFYNASKAALVLFFETLRVELGSDVGVTIVTPGFIESEL  233 (248)
Q Consensus       187 ~~~~------------------------~~~~~~Y~~sKaal~~l~~~la~~~~~~i~v~~v~pg~v~T~~  233 (248)
                      .+..                        ..+...|+.||.+.+.+.+.++..++  +++..+.|+.+..+-
T Consensus       194 vYG~~~~~~~E~~i~~~~~~~e~~~~~~~~P~s~Yg~SK~a~E~l~~~~~~~~g--l~~v~lR~~~vyGp~  262 (442)
T PLN02572        194 EYGTPNIDIEEGYITITHNGRTDTLPYPKQASSFYHLSKVHDSHNIAFTCKAWG--IRATDLNQGVVYGVR  262 (442)
T ss_pred             ecCCCCCCCcccccccccccccccccCCCCCCCcchhHHHHHHHHHHHHHHhcC--CCEEEEecccccCCC
Confidence            5421                        11234799999999999998887763  788888888776654

>PLN02583 cinnamoyl-CoA reductase

Probab=99.80  E-value=3.9e-18  Score=146.97  Aligned_cols=171  Identities=13%  Similarity=0.046  Sum_probs=127.6

Q ss_pred             CCCEEEEcCCCChHHHHHHHHHHHcCCeEEEEeCCcch--HHHHHHHHHhhCCCcEEEEEccCCCHHHHHHHHHHHHhHc
Q 044010           46 SGKVVIITGASSGIGEHLAYEYARRGACLALCARREKS--LEEVADTAREIGSPDVITIRADVSKVDDCRSLVEETMNHF  123 (248)
Q Consensus        46 ~~k~~lVtGg~~gIG~aia~~l~~~G~~V~l~~r~~~~--~~~~~~~l~~~~~~~v~~~~~D~~~~~~~~~~~~~~~~~~  123 (248)
                      ++|+++||||+|+||.+++++|+++|++|+++.|+..+  .++....+... +.++.++.+|++|.+++.+++.      
T Consensus         5 ~~k~vlVTGatG~IG~~lv~~Ll~~G~~V~~~~R~~~~~~~~~~~~~l~~~-~~~~~~~~~Dl~d~~~~~~~l~------   77 (297)
T PLN02583          5 SSKSVCVMDASGYVGFWLVKRLLSRGYTVHAAVQKNGETEIEKEIRGLSCE-EERLKVFDVDPLDYHSILDALK------   77 (297)
T ss_pred             CCCEEEEECCCCHHHHHHHHHHHhCCCEEEEEEcCchhhhHHHHHHhcccC-CCceEEEEecCCCHHHHHHHHc------
Confidence            57899999999999999999999999999999986432  11222222211 2368889999999998876653      


Q ss_pred             CCccEEEEccccCCcccccccCChHHHHHHHHhhhHHHHHHHHHHhhhhhhcCCeEEEEcCccccccC---CC-------
Q 044010          124 GRLDHLVNNAGISSVALFEDIVNITDFKQIMNINFWGSVYTTRFAVPHLRYTKGKIVVLSSAASWLTA---PR-------  193 (248)
Q Consensus       124 g~id~vv~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~g~iV~isS~~~~~~~---~~-------  193 (248)
                       .+|.++|.++....       ..+++++.+++|+.+++++++++.+.+  ..++||++||..+....   +.       
T Consensus        78 -~~d~v~~~~~~~~~-------~~~~~~~~~~~nv~gt~~ll~aa~~~~--~v~riV~~SS~~a~~~~~~~~~~~~~~~E  147 (297)
T PLN02583         78 -GCSGLFCCFDPPSD-------YPSYDEKMVDVEVRAAHNVLEACAQTD--TIEKVVFTSSLTAVIWRDDNISTQKDVDE  147 (297)
T ss_pred             -CCCEEEEeCccCCc-------ccccHHHHHHHHHHHHHHHHHHHHhcC--CccEEEEecchHheecccccCCCCCCCCc
Confidence             68899887653221       113467899999999999999987653  23699999998664211   00       


Q ss_pred             --C----------ccchHHHHHHHHHHHHHHHHhCCCeEEEEEecCccccCccc
Q 044010          194 --M----------SFYNASKAALVLFFETLRVELGSDVGVTIVTPGFIESELTQ  235 (248)
Q Consensus       194 --~----------~~Y~~sKaal~~l~~~la~~~~~~i~v~~v~pg~v~T~~~~  235 (248)
                        +          ..|+.||...+.+++.++++.  +++++++.|+.|..|...
T Consensus       148 ~~~~~~~~~~~~~~~Y~~sK~~aE~~~~~~~~~~--gi~~v~lrp~~v~Gp~~~  199 (297)
T PLN02583        148 RSWSDQNFCRKFKLWHALAKTLSEKTAWALAMDR--GVNMVSINAGLLMGPSLT  199 (297)
T ss_pred             ccCCCHHHHhhcccHHHHHHHHHHHHHHHHHHHh--CCcEEEEcCCcccCCCCC
Confidence              0          159999999999998887664  599999999999887643

>TIGR01472 gmd GDP-mannose 4,6-dehydratase

Probab=99.80  E-value=2.1e-18  Score=151.37  Aligned_cols=170  Identities=16%  Similarity=0.109  Sum_probs=122.7

Q ss_pred             CEEEEcCCCChHHHHHHHHHHHcCCeEEEEeCCcchH-HHHHHHHH----hhCCCcEEEEEccCCCHHHHHHHHHHHHhH
Q 044010           48 KVVIITGASSGIGEHLAYEYARRGACLALCARREKSL-EEVADTAR----EIGSPDVITIRADVSKVDDCRSLVEETMNH  122 (248)
Q Consensus        48 k~~lVtGg~~gIG~aia~~l~~~G~~V~l~~r~~~~~-~~~~~~l~----~~~~~~v~~~~~D~~~~~~~~~~~~~~~~~  122 (248)
                      |++|||||+|+||.+++++|+++|++|++++|+.+.. ....+.+.    ...+.++.++.+|++|.+++.++++..   
T Consensus         1 ~~vlVTGatGfIG~~l~~~L~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~l~~~~~~~---   77 (343)
T TIGR01472         1 KIALITGITGQDGSYLAEFLLEKGYEVHGLIRRSSSFNTQRIEHIYEDPHNVNKARMKLHYGDLTDSSNLRRIIDEI---   77 (343)
T ss_pred             CeEEEEcCCCcHHHHHHHHHHHCCCEEEEEecCCcccchhhhhhhhhccccccccceeEEEeccCCHHHHHHHHHhC---
Confidence            6899999999999999999999999999999976421 11111111    111235789999999999999988864   


Q ss_pred             cCCccEEEEccccCCcccccccCChHHHHHHHHhhhHHHHHHHHHHhhhhhhcCCeEEEEcCcccccc-----------C
Q 044010          123 FGRLDHLVNNAGISSVALFEDIVNITDFKQIMNINFWGSVYTTRFAVPHLRYTKGKIVVLSSAASWLT-----------A  191 (248)
Q Consensus       123 ~g~id~vv~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~g~iV~isS~~~~~~-----------~  191 (248)
                        ++|+|||+|+......     +.+.....+++|+.++.++++++.+.-.++..++|++||...+..           .
T Consensus        78 --~~d~ViH~Aa~~~~~~-----~~~~~~~~~~~n~~gt~~ll~a~~~~~~~~~~~~v~~SS~~vyg~~~~~~~~E~~~~  150 (343)
T TIGR01472        78 --KPTEIYNLAAQSHVKV-----SFEIPEYTADVDGIGTLRLLEAVRTLGLIKSVKFYQASTSELYGKVQEIPQNETTPF  150 (343)
T ss_pred             --CCCEEEECCcccccch-----hhhChHHHHHHHHHHHHHHHHHHHHhCCCcCeeEEEeccHHhhCCCCCCCCCCCCCC
Confidence              5899999999754321     123335677889999999999987641112247999999755431           1


Q ss_pred             CCCccchHHHHHHHHHHHHHHHHhCCC----eEEEEEecC
Q 044010          192 PRMSFYNASKAALVLFFETLRVELGSD----VGVTIVTPG  227 (248)
Q Consensus       192 ~~~~~Y~~sKaal~~l~~~la~~~~~~----i~v~~v~pg  227 (248)
                      .+...|+.||.+.+.+++.++.+++-.    +.+|...|+
T Consensus       151 ~p~~~Y~~sK~~~e~~~~~~~~~~~~~~~~~~~~~~~gp~  190 (343)
T TIGR01472       151 YPRSPYAAAKLYAHWITVNYREAYGLFAVNGILFNHESPR  190 (343)
T ss_pred             CCCChhHHHHHHHHHHHHHHHHHhCCceEEEeecccCCCC
Confidence            234689999999999999998887532    233455565

Excluded from this model are members of the clade that score poorly because of highly dervied (phylogenetically long-branch) sequences, e.g. Aneurinibacillus thermoaerophilus Gmd, described as a bifunctional GDP-mannose 4,6-dehydratase/GDP-6-deoxy-D-lyxo-4-hexulose reductase (PUBMED:11096116).

>PLN02650 dihydroflavonol-4-reductase

Probab=99.80  E-value=6.3e-18  Score=148.82  Aligned_cols=174  Identities=17%  Similarity=0.143  Sum_probs=131.7

Q ss_pred             CCCCEEEEcCCCChHHHHHHHHHHHcCCeEEEEeCCcchHHHHHHHHHhhC-CCcEEEEEccCCCHHHHHHHHHHHHhHc
Q 044010           45 VSGKVVIITGASSGIGEHLAYEYARRGACLALCARREKSLEEVADTAREIG-SPDVITIRADVSKVDDCRSLVEETMNHF  123 (248)
Q Consensus        45 ~~~k~~lVtGg~~gIG~aia~~l~~~G~~V~l~~r~~~~~~~~~~~l~~~~-~~~v~~~~~D~~~~~~~~~~~~~~~~~~  123 (248)
                      -.+|++|||||+|+||.+++++|+++|++|++++|+.+..+.........+ ..++.++.+|++|.++++++++      
T Consensus         3 ~~~k~iLVTGatGfIGs~l~~~L~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~v~~Dl~d~~~~~~~~~------   76 (351)
T PLN02650          3 SQKETVCVTGASGFIGSWLVMRLLERGYTVRATVRDPANVKKVKHLLDLPGATTRLTLWKADLAVEGSFDDAIR------   76 (351)
T ss_pred             CCCCEEEEeCCcHHHHHHHHHHHHHCCCEEEEEEcCcchhHHHHHHHhccCCCCceEEEEecCCChhhHHHHHh------
Confidence            357899999999999999999999999999999998765544433222111 1257889999999988887765      


Q ss_pred             CCccEEEEccccCCcccccccCChHHHHHHHHhhhHHHHHHHHHHhhhhhhcCCeEEEEcCccccccC----C-------
Q 044010          124 GRLDHLVNNAGISSVALFEDIVNITDFKQIMNINFWGSVYTTRFAVPHLRYTKGKIVVLSSAASWLTA----P-------  192 (248)
Q Consensus       124 g~id~vv~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~g~iV~isS~~~~~~~----~-------  192 (248)
                       .+|++||+|+.....      ..+..++.+++|+.++.++++++.+..  ..+++|++||...+.+.    +       
T Consensus        77 -~~d~ViH~A~~~~~~------~~~~~~~~~~~Nv~gt~~ll~aa~~~~--~~~r~v~~SS~~~~~~~~~~~~~~~E~~~  147 (351)
T PLN02650         77 -GCTGVFHVATPMDFE------SKDPENEVIKPTVNGMLSIMKACAKAK--TVRRIVFTSSAGTVNVEEHQKPVYDEDCW  147 (351)
T ss_pred             -CCCEEEEeCCCCCCC------CCCchhhhhhHHHHHHHHHHHHHHhcC--CceEEEEecchhhcccCCCCCCccCcccC
Confidence             589999999864321      112345778999999999999987542  12589999997543221    0       


Q ss_pred             -----------CCccchHHHHHHHHHHHHHHHHhCCCeEEEEEecCccccCccc
Q 044010          193 -----------RMSFYNASKAALVLFFETLRVELGSDVGVTIVTPGFIESELTQ  235 (248)
Q Consensus       193 -----------~~~~Y~~sKaal~~l~~~la~~~~~~i~v~~v~pg~v~T~~~~  235 (248)
                                 ...+|+.||.+.+.+++.++.++  ++++..+.|+.+.+|...
T Consensus       148 ~~~~~~~~~~~~~~~Y~~sK~~~E~~~~~~~~~~--gi~~~ilRp~~v~Gp~~~  199 (351)
T PLN02650        148 SDLDFCRRKKMTGWMYFVSKTLAEKAAWKYAAEN--GLDFISIIPTLVVGPFIS  199 (351)
T ss_pred             CchhhhhccccccchHHHHHHHHHHHHHHHHHHc--CCeEEEECCCceECCCCC
Confidence                       11379999999999999998875  489999999999887543

>PRK10217 dTDP-glucose 4,6-dehydratase; Provisional

Probab=99.80  E-value=4.3e-18  Score=149.93  Aligned_cols=168  Identities=15%  Similarity=0.101  Sum_probs=120.1

Q ss_pred             CEEEEcCCCChHHHHHHHHHHHcCCeEE-EEeCCcchHHHHHHHHHhh-CCCcEEEEEccCCCHHHHHHHHHHHHhHcCC
Q 044010           48 KVVIITGASSGIGEHLAYEYARRGACLA-LCARREKSLEEVADTAREI-GSPDVITIRADVSKVDDCRSLVEETMNHFGR  125 (248)
Q Consensus        48 k~~lVtGg~~gIG~aia~~l~~~G~~V~-l~~r~~~~~~~~~~~l~~~-~~~~v~~~~~D~~~~~~~~~~~~~~~~~~g~  125 (248)
                      |++|||||+|+||.+++++|+++|++++ +.+|.... ... ..+... ...++.++.+|++|.++++++++.     .+
T Consensus         2 ~~vlVtGatGfIG~~l~~~L~~~g~~~v~~~~~~~~~-~~~-~~~~~~~~~~~~~~~~~Dl~d~~~~~~~~~~-----~~   74 (355)
T PRK10217          2 RKILITGGAGFIGSALVRYIINETSDAVVVVDKLTYA-GNL-MSLAPVAQSERFAFEKVDICDRAELARVFTE-----HQ   74 (355)
T ss_pred             cEEEEEcCCcHHHHHHHHHHHHcCCCEEEEEecCccc-cch-hhhhhcccCCceEEEECCCcChHHHHHHHhh-----cC
Confidence            5799999999999999999999998754 45554321 111 111111 123577889999999999888875     26


Q ss_pred             ccEEEEccccCCcccccccCChHHHHHHHHhhhHHHHHHHHHHhhhhh------hcCCeEEEEcCccccc----------
Q 044010          126 LDHLVNNAGISSVALFEDIVNITDFKQIMNINFWGSVYTTRFAVPHLR------YTKGKIVVLSSAASWL----------  189 (248)
Q Consensus       126 id~vv~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~------~~~g~iV~isS~~~~~----------  189 (248)
                      +|+|||+||.....     .+.+++++.+++|+.++.++++.+.+.+.      +...++|++||.+.+.          
T Consensus        75 ~D~Vih~A~~~~~~-----~~~~~~~~~~~~N~~gt~~ll~a~~~~~~~~~~~~~~~~~~i~~SS~~vyg~~~~~~~~~~  149 (355)
T PRK10217         75 PDCVMHLAAESHVD-----RSIDGPAAFIETNIVGTYTLLEAARAYWNALTEDKKSAFRFHHISTDEVYGDLHSTDDFFT  149 (355)
T ss_pred             CCEEEECCcccCcc-----hhhhChHHHHHHhhHHHHHHHHHHHHhhhcccccccCceEEEEecchhhcCCCCCCCCCcC
Confidence            99999999975421     23456789999999999999999987532      1124899999865432          


Q ss_pred             ---cCCCCccchHHHHHHHHHHHHHHHHhCCCeEEEEEecCcc
Q 044010          190 ---TAPRMSFYNASKAALVLFFETLRVELGSDVGVTIVTPGFI  229 (248)
Q Consensus       190 ---~~~~~~~Y~~sKaal~~l~~~la~~~~~~i~v~~v~pg~v  229 (248)
                         +..+...|+.||.+.+.+++.++++++  +++..+.|+.+
T Consensus       150 E~~~~~p~s~Y~~sK~~~e~~~~~~~~~~~--~~~~i~r~~~v  190 (355)
T PRK10217        150 ETTPYAPSSPYSASKASSDHLVRAWLRTYG--LPTLITNCSNN  190 (355)
T ss_pred             CCCCCCCCChhHHHHHHHHHHHHHHHHHhC--CCeEEEeeeee
Confidence               112356799999999999999988875  34444444444

>PLN02214 cinnamoyl-CoA reductase

Probab=99.78  E-value=1.7e-17  Score=145.75  Aligned_cols=167  Identities=17%  Similarity=0.214  Sum_probs=128.5

Q ss_pred             CCCCCEEEEcCCCChHHHHHHHHHHHcCCeEEEEeCCcchHHHH-HHHHHhhCCCcEEEEEccCCCHHHHHHHHHHHHhH
Q 044010           44 DVSGKVVIITGASSGIGEHLAYEYARRGACLALCARREKSLEEV-ADTAREIGSPDVITIRADVSKVDDCRSLVEETMNH  122 (248)
Q Consensus        44 ~~~~k~~lVtGg~~gIG~aia~~l~~~G~~V~l~~r~~~~~~~~-~~~l~~~~~~~v~~~~~D~~~~~~~~~~~~~~~~~  122 (248)
                      ..++|+++||||+|+||.+++++|+++|++|+.++|+.++.... .+.+.. ...++.++.+|++|.+++.++++     
T Consensus         7 ~~~~~~vlVTGatGfIG~~l~~~L~~~G~~V~~~~r~~~~~~~~~~~~~~~-~~~~~~~~~~Dl~d~~~~~~~~~-----   80 (342)
T PLN02214          7 SPAGKTVCVTGAGGYIASWIVKILLERGYTVKGTVRNPDDPKNTHLRELEG-GKERLILCKADLQDYEALKAAID-----   80 (342)
T ss_pred             cCCCCEEEEECCCcHHHHHHHHHHHHCcCEEEEEeCCchhhhHHHHHHhhC-CCCcEEEEecCcCChHHHHHHHh-----
Confidence            35788999999999999999999999999999999986543221 222221 12357889999999998888775     


Q ss_pred             cCCccEEEEccccCCcccccccCChHHHHHHHHhhhHHHHHHHHHHhhhhhhcCCeEEEEcCccccccC----C------
Q 044010          123 FGRLDHLVNNAGISSVALFEDIVNITDFKQIMNINFWGSVYTTRFAVPHLRYTKGKIVVLSSAASWLTA----P------  192 (248)
Q Consensus       123 ~g~id~vv~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~g~iV~isS~~~~~~~----~------  192 (248)
                        ++|+|||+|+...          +++.+.+++|+.++.++++++...   ..+++|++||..++++.    +      
T Consensus        81 --~~d~Vih~A~~~~----------~~~~~~~~~nv~gt~~ll~aa~~~---~v~r~V~~SS~~avyg~~~~~~~~~~~E  145 (342)
T PLN02214         81 --GCDGVFHTASPVT----------DDPEQMVEPAVNGAKFVINAAAEA---KVKRVVITSSIGAVYMDPNRDPEAVVDE  145 (342)
T ss_pred             --cCCEEEEecCCCC----------CCHHHHHHHHHHHHHHHHHHHHhc---CCCEEEEeccceeeeccCCCCCCcccCc
Confidence              5999999998531          234678899999999999997643   23589999997544321    0      


Q ss_pred             -----------CCccchHHHHHHHHHHHHHHHHhCCCeEEEEEecCccccCc
Q 044010          193 -----------RMSFYNASKAALVLFFETLRVELGSDVGVTIVTPGFIESEL  233 (248)
Q Consensus       193 -----------~~~~Y~~sKaal~~l~~~la~~~~~~i~v~~v~pg~v~T~~  233 (248)
                                 ....|+.||.+.+.+++.+++++  ++++..+.|+.|..|-
T Consensus       146 ~~~~~~~~~~~p~~~Y~~sK~~aE~~~~~~~~~~--g~~~v~lRp~~vyGp~  195 (342)
T PLN02214        146 SCWSDLDFCKNTKNWYCYGKMVAEQAAWETAKEK--GVDLVVLNPVLVLGPP  195 (342)
T ss_pred             ccCCChhhccccccHHHHHHHHHHHHHHHHHHHc--CCcEEEEeCCceECCC
Confidence                       12369999999999999988876  4788899999887764

>PLN02240 UDP-glucose 4-epimerase

Probab=99.78  E-value=3.1e-17  Score=144.20  Aligned_cols=169  Identities=17%  Similarity=0.249  Sum_probs=122.7

Q ss_pred             cCCCCCEEEEcCCCChHHHHHHHHHHHcCCeEEEEeCCcchHHHHHHHHHhh---CCCcEEEEEccCCCHHHHHHHHHHH
Q 044010           43 EDVSGKVVIITGASSGIGEHLAYEYARRGACLALCARREKSLEEVADTAREI---GSPDVITIRADVSKVDDCRSLVEET  119 (248)
Q Consensus        43 ~~~~~k~~lVtGg~~gIG~aia~~l~~~G~~V~l~~r~~~~~~~~~~~l~~~---~~~~v~~~~~D~~~~~~~~~~~~~~  119 (248)
                      +.|++|+++||||+|+||.+++++|+++|++|++++|.........+.+...   ...++.++.+|++|.++++++++..
T Consensus         1 ~~~~~~~vlItGatG~iG~~l~~~L~~~g~~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~l~~~~~~~   80 (352)
T PLN02240          1 MSLMGRTILVTGGAGYIGSHTVLQLLLAGYKVVVIDNLDNSSEEALRRVKELAGDLGDNLVFHKVDLRDKEALEKVFAST   80 (352)
T ss_pred             CCCCCCEEEEECCCChHHHHHHHHHHHCCCEEEEEeCCCcchHHHHHHHHHhhcccCccceEEecCcCCHHHHHHHHHhC
Confidence            3578899999999999999999999999999999987543322222222221   1235788999999999998887752


Q ss_pred             HhHcCCccEEEEccccCCcccccccCChHHHHHHHHhhhHHHHHHHHHHhhhhhhcCCeEEEEcCcccccc---------
Q 044010          120 MNHFGRLDHLVNNAGISSVALFEDIVNITDFKQIMNINFWGSVYTTRFAVPHLRYTKGKIVVLSSAASWLT---------  190 (248)
Q Consensus       120 ~~~~g~id~vv~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~g~iV~isS~~~~~~---------  190 (248)
                           ++|++||+||.....     .+.+++.+.+++|+.++.++++++...   ...++|++||...+..         
T Consensus        81 -----~~d~vih~a~~~~~~-----~~~~~~~~~~~~n~~~~~~l~~~~~~~---~~~~~v~~Ss~~vyg~~~~~~~~E~  147 (352)
T PLN02240         81 -----RFDAVIHFAGLKAVG-----ESVAKPLLYYDNNLVGTINLLEVMAKH---GCKKLVFSSSATVYGQPEEVPCTEE  147 (352)
T ss_pred             -----CCCEEEEccccCCcc-----ccccCHHHHHHHHHHHHHHHHHHHHHc---CCCEEEEEccHHHhCCCCCCCCCCC
Confidence                 799999999975422     123556789999999999999875421   2358999999654321         


Q ss_pred             --CCCCccchHHHHHHHHHHHHHHHHhCCCeEEEEEe
Q 044010          191 --APRMSFYNASKAALVLFFETLRVELGSDVGVTIVT  225 (248)
Q Consensus       191 --~~~~~~Y~~sKaal~~l~~~la~~~~~~i~v~~v~  225 (248)
                        ..+...|+.||.+.+.+++.++.+.. ++++..+.
T Consensus       148 ~~~~~~~~Y~~sK~~~e~~~~~~~~~~~-~~~~~~~R  183 (352)
T PLN02240        148 FPLSATNPYGRTKLFIEEICRDIHASDP-EWKIILLR  183 (352)
T ss_pred             CCCCCCCHHHHHHHHHHHHHHHHHHhcC-CCCEEEEe
Confidence              12356899999999999999876531 24444444

>PLN02662 cinnamyl-alcohol dehydrogenase family protein

Probab=99.78  E-value=2.3e-17  Score=143.25  Aligned_cols=172  Identities=19%  Similarity=0.176  Sum_probs=127.8

Q ss_pred             CCCEEEEcCCCChHHHHHHHHHHHcCCeEEEEeCCcchHHHHHHHHHhhC-CCcEEEEEccCCCHHHHHHHHHHHHhHcC
Q 044010           46 SGKVVIITGASSGIGEHLAYEYARRGACLALCARREKSLEEVADTAREIG-SPDVITIRADVSKVDDCRSLVEETMNHFG  124 (248)
Q Consensus        46 ~~k~~lVtGg~~gIG~aia~~l~~~G~~V~l~~r~~~~~~~~~~~l~~~~-~~~v~~~~~D~~~~~~~~~~~~~~~~~~g  124 (248)
                      ++|++|||||+|+||.+++++|+++|++|++++|+....+.......... ..++.++.+|++|.+++.++++       
T Consensus         3 ~~~~ilVtGatGfIG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~-------   75 (322)
T PLN02662          3 EGKVVCVTGASGYIASWLVKLLLQRGYTVKATVRDPNDPKKTEHLLALDGAKERLHLFKANLLEEGSFDSVVD-------   75 (322)
T ss_pred             CCCEEEEECChHHHHHHHHHHHHHCCCEEEEEEcCCCchhhHHHHHhccCCCCceEEEeccccCcchHHHHHc-------
Confidence            47899999999999999999999999999999998654332222111111 2367899999999988877765       


Q ss_pred             CccEEEEccccCCcccccccCChHHHHHHHHhhhHHHHHHHHHHhhhhhhcCCeEEEEcCcccc-c-cCC----------
Q 044010          125 RLDHLVNNAGISSVALFEDIVNITDFKQIMNINFWGSVYTTRFAVPHLRYTKGKIVVLSSAASW-L-TAP----------  192 (248)
Q Consensus       125 ~id~vv~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~g~iV~isS~~~~-~-~~~----------  192 (248)
                      ++|++||+|+.....      ..+..++.+++|+.++.++++++....  ...++|++||.++. + +.+          
T Consensus        76 ~~d~Vih~A~~~~~~------~~~~~~~~~~~nv~gt~~ll~a~~~~~--~~~~~v~~SS~~~~~y~~~~~~~~~~~~E~  147 (322)
T PLN02662         76 GCEGVFHTASPFYHD------VTDPQAELIDPAVKGTLNVLRSCAKVP--SVKRVVVTSSMAAVAYNGKPLTPDVVVDET  147 (322)
T ss_pred             CCCEEEEeCCcccCC------CCChHHHHHHHHHHHHHHHHHHHHhCC--CCCEEEEccCHHHhcCCCcCCCCCCcCCcc
Confidence            589999999865321      112224788999999999999976432  23589999997642 1 110          


Q ss_pred             ----C------CccchHHHHHHHHHHHHHHHHhCCCeEEEEEecCccccCcc
Q 044010          193 ----R------MSFYNASKAALVLFFETLRVELGSDVGVTIVTPGFIESELT  234 (248)
Q Consensus       193 ----~------~~~Y~~sKaal~~l~~~la~~~~~~i~v~~v~pg~v~T~~~  234 (248)
                          .      ...|+.+|.+.+.+++.+.+++  ++++..+.|+.+.+|..
T Consensus       148 ~~~~p~~~~~~~~~Y~~sK~~~E~~~~~~~~~~--~~~~~~lRp~~v~Gp~~  197 (322)
T PLN02662        148 WFSDPAFCEESKLWYVLSKTLAEEAAWKFAKEN--GIDMVTINPAMVIGPLL  197 (322)
T ss_pred             cCCChhHhhcccchHHHHHHHHHHHHHHHHHHc--CCcEEEEeCCcccCCCC
Confidence                0      1379999999999998887775  48889999999988764

>COG1086 Predicted nucleoside-diphosphate sugar epimerases [Cell envelope biogenesis, outer membrane / Carbohydrate transport and metabolism]

Probab=99.75  E-value=8.5e-17  Score=144.70  Aligned_cols=170  Identities=19%  Similarity=0.240  Sum_probs=142.6

Q ss_pred             CCCCCEEEEcCCCChHHHHHHHHHHHcCC-eEEEEeCCcchHHHHHHHHHhhCC-CcEEEEEccCCCHHHHHHHHHHHHh
Q 044010           44 DVSGKVVIITGASSGIGEHLAYEYARRGA-CLALCARREKSLEEVADTAREIGS-PDVITIRADVSKVDDCRSLVEETMN  121 (248)
Q Consensus        44 ~~~~k~~lVtGg~~gIG~aia~~l~~~G~-~V~l~~r~~~~~~~~~~~l~~~~~-~~v~~~~~D~~~~~~~~~~~~~~~~  121 (248)
                      .++||++|||||+|.||.++++++++.+. ++++.+|++-+.-....++++..+ .+..++-+|++|.+.++.+++..  
T Consensus       247 ~~~gK~vLVTGagGSiGsel~~qil~~~p~~i~l~~~~E~~~~~i~~el~~~~~~~~~~~~igdVrD~~~~~~~~~~~--  324 (588)
T COG1086         247 MLTGKTVLVTGGGGSIGSELCRQILKFNPKEIILFSRDEYKLYLIDMELREKFPELKLRFYIGDVRDRDRVERAMEGH--  324 (588)
T ss_pred             HcCCCEEEEeCCCCcHHHHHHHHHHhcCCCEEEEecCchHHHHHHHHHHHhhCCCcceEEEecccccHHHHHHHHhcC--
Confidence            46899999999999999999999999987 899999999988888889988643 57889999999999999999854  


Q ss_pred             HcCCccEEEEccccCCcccccccCChHHHHHHHHhhhHHHHHHHHHHhhhhhhcCCeEEEEcCccccccCCCCccchHHH
Q 044010          122 HFGRLDHLVNNAGISSVALFEDIVNITDFKQIMNINFWGSVYTTRFAVPHLRYTKGKIVVLSSAASWLTAPRMSFYNASK  201 (248)
Q Consensus       122 ~~g~id~vv~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~g~iV~isS~~~~~~~~~~~~Y~~sK  201 (248)
                         ++|+++|+|+.-..+.+     ...+.+.+.+|+.|+.++++++...   .-.++|.+|+.-++.|.   ..||++|
T Consensus       325 ---kvd~VfHAAA~KHVPl~-----E~nP~Eai~tNV~GT~nv~~aa~~~---~V~~~V~iSTDKAV~Pt---NvmGaTK  390 (588)
T COG1086         325 ---KVDIVFHAAALKHVPLV-----EYNPEEAIKTNVLGTENVAEAAIKN---GVKKFVLISTDKAVNPT---NVMGATK  390 (588)
T ss_pred             ---CCceEEEhhhhccCcch-----hcCHHHHHHHhhHhHHHHHHHHHHh---CCCEEEEEecCcccCCc---hHhhHHH
Confidence               79999999997654422     2456788999999999999998744   23589999999888874   5799999


Q ss_pred             HHHHHHHHHHHHHhCC-CeEEEEEecCcc
Q 044010          202 AALVLFFETLRVELGS-DVGVTIVTPGFI  229 (248)
Q Consensus       202 aal~~l~~~la~~~~~-~i~v~~v~pg~v  229 (248)
                      ...+.+.++++...+. +-++.+|.=|-|
T Consensus       391 r~aE~~~~a~~~~~~~~~T~f~~VRFGNV  419 (588)
T COG1086         391 RLAEKLFQAANRNVSGTGTRFCVVRFGNV  419 (588)
T ss_pred             HHHHHHHHHHhhccCCCCcEEEEEEecce
Confidence            9999999999987764 456666666654

>KOG1502 consensus Flavonol reductase/cinnamoyl-CoA reductase [Defense mechanisms]

Probab=99.75  E-value=7.9e-17  Score=137.59  Aligned_cols=173  Identities=18%  Similarity=0.181  Sum_probs=137.6

Q ss_pred             CCCEEEEcCCCChHHHHHHHHHHHcCCeEEEEeCCcchHHHHHHHHHhhC--CCcEEEEEccCCCHHHHHHHHHHHHhHc
Q 044010           46 SGKVVIITGASSGIGEHLAYEYARRGACLALCARREKSLEEVADTAREIG--SPDVITIRADVSKVDDCRSLVEETMNHF  123 (248)
Q Consensus        46 ~~k~~lVtGg~~gIG~aia~~l~~~G~~V~l~~r~~~~~~~~~~~l~~~~--~~~v~~~~~D~~~~~~~~~~~~~~~~~~  123 (248)
                      .+++++||||+|.||.+++++|+++||+|..+.|++++.+.. +.+++..  +.+...+..|++|++++.++++      
T Consensus         5 ~~~~VcVTGAsGfIgswivk~LL~rGY~V~gtVR~~~~~k~~-~~L~~l~~a~~~l~l~~aDL~d~~sf~~ai~------   77 (327)
T KOG1502|consen    5 EGKKVCVTGASGFIGSWIVKLLLSRGYTVRGTVRDPEDEKKT-EHLRKLEGAKERLKLFKADLLDEGSFDKAID------   77 (327)
T ss_pred             CCcEEEEeCCchHHHHHHHHHHHhCCCEEEEEEcCcchhhhH-HHHHhcccCcccceEEeccccccchHHHHHh------
Confidence            789999999999999999999999999999999998874442 2233322  2368899999999999999997      


Q ss_pred             CCccEEEEccccCCcccccccCChHHHHHHHHhhhHHHHHHHHHHhhhhhhcCCeEEEEcCccccccC-CC---------
Q 044010          124 GRLDHLVNNAGISSVALFEDIVNITDFKQIMNINFWGSVYTTRFAVPHLRYTKGKIVVLSSAASWLTA-PR---------  193 (248)
Q Consensus       124 g~id~vv~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~g~iV~isS~~~~~~~-~~---------  193 (248)
                       ++|+|+|.|.+......      +.-.+.++..+.|+.++++++...-  .--|+|++||.++..+. +.         
T Consensus        78 -gcdgVfH~Asp~~~~~~------~~e~~li~pav~Gt~nVL~ac~~~~--sVkrvV~TSS~aAv~~~~~~~~~~~vvdE  148 (327)
T KOG1502|consen   78 -GCDGVFHTASPVDFDLE------DPEKELIDPAVKGTKNVLEACKKTK--SVKRVVYTSSTAAVRYNGPNIGENSVVDE  148 (327)
T ss_pred             -CCCEEEEeCccCCCCCC------CcHHhhhhHHHHHHHHHHHHHhccC--CcceEEEeccHHHhccCCcCCCCCccccc
Confidence             69999999987765421      1223788899999999999987442  22589999999987653 11         


Q ss_pred             --C----------ccchHHHHHHHHHHHHHHHHhCCCeEEEEEecCccccCcccc
Q 044010          194 --M----------SFYNASKAALVLFFETLRVELGSDVGVTIVTPGFIESELTQG  236 (248)
Q Consensus       194 --~----------~~Y~~sKaal~~l~~~la~~~~~~i~v~~v~pg~v~T~~~~~  236 (248)
                        +          ..|..||.--+..++..+.+.  ++...+|+||.|-.|....
T Consensus       149 ~~wsd~~~~~~~~~~Y~~sK~lAEkaAw~fa~e~--~~~lv~inP~lV~GP~l~~  201 (327)
T KOG1502|consen  149 ESWSDLDFCRCKKLWYALSKTLAEKAAWEFAKEN--GLDLVTINPGLVFGPGLQP  201 (327)
T ss_pred             ccCCcHHHHHhhHHHHHHHHHHHHHHHHHHHHhC--CccEEEecCCceECCCccc
Confidence              1          259999998888888888885  4788899999998887766

>PRK10675 UDP-galactose-4-epimerase; Provisional

Probab=99.74  E-value=2.3e-16  Score=137.96  Aligned_cols=164  Identities=16%  Similarity=0.207  Sum_probs=118.4

Q ss_pred             EEEEcCCCChHHHHHHHHHHHcCCeEEEEeCCcchHHHHHHHHHhhCCCcEEEEEccCCCHHHHHHHHHHHHhHcCCccE
Q 044010           49 VVIITGASSGIGEHLAYEYARRGACLALCARREKSLEEVADTAREIGSPDVITIRADVSKVDDCRSLVEETMNHFGRLDH  128 (248)
Q Consensus        49 ~~lVtGg~~gIG~aia~~l~~~G~~V~l~~r~~~~~~~~~~~l~~~~~~~v~~~~~D~~~~~~~~~~~~~~~~~~g~id~  128 (248)
                      +++||||+|+||.+++++|+++|++|++++|...........+.+..+.++.++.+|++|.+++.++++.     .++|+
T Consensus         2 ~vlVtGatG~iG~~l~~~L~~~g~~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~~~~~~~~-----~~~d~   76 (338)
T PRK10675          2 RVLVTGGSGYIGSHTCVQLLQNGHDVVILDNLCNSKRSVLPVIERLGGKHPTFVEGDIRNEALLTEILHD-----HAIDT   76 (338)
T ss_pred             eEEEECCCChHHHHHHHHHHHCCCeEEEEecCCCchHhHHHHHHHhcCCCceEEEccCCCHHHHHHHHhc-----CCCCE
Confidence            6899999999999999999999999999887544333333333333334577889999999998888764     37999


Q ss_pred             EEEccccCCcccccccCChHHHHHHHHhhhHHHHHHHHHHhhhhhhcCCeEEEEcCccccccC------------CCCcc
Q 044010          129 LVNNAGISSVALFEDIVNITDFKQIMNINFWGSVYTTRFAVPHLRYTKGKIVVLSSAASWLTA------------PRMSF  196 (248)
Q Consensus       129 vv~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~g~iV~isS~~~~~~~------------~~~~~  196 (248)
                      +||+||......     ..+...+.+++|+.++.++++++...   ..+++|++||...+...            .+...
T Consensus        77 vvh~a~~~~~~~-----~~~~~~~~~~~n~~~~~~l~~~~~~~---~~~~~v~~Ss~~~yg~~~~~~~~E~~~~~~p~~~  148 (338)
T PRK10675         77 VIHFAGLKAVGE-----SVQKPLEYYDNNVNGTLRLISAMRAA---NVKNLIFSSSATVYGDQPKIPYVESFPTGTPQSP  148 (338)
T ss_pred             EEECCccccccc-----hhhCHHHHHHHHHHHHHHHHHHHHHc---CCCEEEEeccHHhhCCCCCCccccccCCCCCCCh
Confidence            999998754321     12334567889999999998875422   23589999997644211            23578


Q ss_pred             chHHHHHHHHHHHHHHHHhCCCeEEEEEec
Q 044010          197 YNASKAALVLFFETLRVELGSDVGVTIVTP  226 (248)
Q Consensus       197 Y~~sKaal~~l~~~la~~~~~~i~v~~v~p  226 (248)
                      |+.+|.+.+.+++.++++.. ++++..+.|
T Consensus       149 Y~~sK~~~E~~~~~~~~~~~-~~~~~ilR~  177 (338)
T PRK10675        149 YGKSKLMVEQILTDLQKAQP-DWSIALLRY  177 (338)
T ss_pred             hHHHHHHHHHHHHHHHHhcC-CCcEEEEEe
Confidence            99999999999999987642 244444443

>PRK15181 Vi polysaccharide biosynthesis protein TviC; Provisional

Probab=99.73  E-value=2.8e-16  Score=138.29  Aligned_cols=173  Identities=17%  Similarity=0.131  Sum_probs=127.5

Q ss_pred             CCCCCEEEEcCCCChHHHHHHHHHHHcCCeEEEEeCCcchHHHHHHHHHh----hCCCcEEEEEccCCCHHHHHHHHHHH
Q 044010           44 DVSGKVVIITGASSGIGEHLAYEYARRGACLALCARREKSLEEVADTARE----IGSPDVITIRADVSKVDDCRSLVEET  119 (248)
Q Consensus        44 ~~~~k~~lVtGg~~gIG~aia~~l~~~G~~V~l~~r~~~~~~~~~~~l~~----~~~~~v~~~~~D~~~~~~~~~~~~~~  119 (248)
                      .+++|++|||||+|.||.+++++|+++|++|+.++|.........+....    ....++.++.+|++|.+++.++++  
T Consensus        12 ~~~~~~vlVtGatGfiG~~lv~~L~~~g~~V~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Di~d~~~l~~~~~--   89 (348)
T PRK15181         12 VLAPKRWLITGVAGFIGSGLLEELLFLNQTVIGLDNFSTGYQHNLDDVRTSVSEEQWSRFIFIQGDIRKFTDCQKACK--   89 (348)
T ss_pred             cccCCEEEEECCccHHHHHHHHHHHHCCCEEEEEeCCCCcchhhhhhhhhccccccCCceEEEEccCCCHHHHHHHhh--
Confidence            56778999999999999999999999999999999865432222222211    111357889999999988877764  


Q ss_pred             HhHcCCccEEEEccccCCcccccccCChHHHHHHHHhhhHHHHHHHHHHhhhhhhcCCeEEEEcCccccccC--------
Q 044010          120 MNHFGRLDHLVNNAGISSVALFEDIVNITDFKQIMNINFWGSVYTTRFAVPHLRYTKGKIVVLSSAASWLTA--------  191 (248)
Q Consensus       120 ~~~~g~id~vv~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~g~iV~isS~~~~~~~--------  191 (248)
                           ++|+|||.|+......     +.++....+++|+.++.++++.+...   .-.++|++||.+.+...        
T Consensus        90 -----~~d~ViHlAa~~~~~~-----~~~~~~~~~~~Nv~gt~nll~~~~~~---~~~~~v~~SS~~vyg~~~~~~~~e~  156 (348)
T PRK15181         90 -----NVDYVLHQAALGSVPR-----SLKDPIATNSANIDGFLNMLTAARDA---HVSSFTYAASSSTYGDHPDLPKIEE  156 (348)
T ss_pred             -----CCCEEEECccccCchh-----hhhCHHHHHHHHHHHHHHHHHHHHHc---CCCeEEEeechHhhCCCCCCCCCCC
Confidence                 5899999999754321     12334567899999999999887532   22489999987654321        


Q ss_pred             ---CCCccchHHHHHHHHHHHHHHHHhCCCeEEEEEecCccccCc
Q 044010          192 ---PRMSFYNASKAALVLFFETLRVELGSDVGVTIVTPGFIESEL  233 (248)
Q Consensus       192 ---~~~~~Y~~sKaal~~l~~~la~~~~~~i~v~~v~pg~v~T~~  233 (248)
                         .+...|+.||.+.+.+++.++.++  ++++..+.|+.+..|-
T Consensus       157 ~~~~p~~~Y~~sK~~~e~~~~~~~~~~--~~~~~~lR~~~vyGp~  199 (348)
T PRK15181        157 RIGRPLSPYAVTKYVNELYADVFARSY--EFNAIGLRYFNVFGRR  199 (348)
T ss_pred             CCCCCCChhhHHHHHHHHHHHHHHHHh--CCCEEEEEecceeCcC
Confidence               123579999999999998887765  4777788888776653

>TIGR01181 dTDP_gluc_dehyt dTDP-glucose 4,6-dehydratase

Probab=99.73  E-value=2.8e-16  Score=135.57  Aligned_cols=169  Identities=17%  Similarity=0.116  Sum_probs=123.6

Q ss_pred             EEEEcCCCChHHHHHHHHHHHcC--CeEEEEeCCcchH-HHHHHHHHhhCCCcEEEEEccCCCHHHHHHHHHHHHhHcCC
Q 044010           49 VVIITGASSGIGEHLAYEYARRG--ACLALCARREKSL-EEVADTAREIGSPDVITIRADVSKVDDCRSLVEETMNHFGR  125 (248)
Q Consensus        49 ~~lVtGg~~gIG~aia~~l~~~G--~~V~l~~r~~~~~-~~~~~~l~~~~~~~v~~~~~D~~~~~~~~~~~~~~~~~~g~  125 (248)
                      +++||||+|+||.+++++|+++|  ++|++.+|..... .+..+.+..  ..++.++.+|++|.+++.++++..     +
T Consensus         1 ~ilItGatG~iG~~l~~~l~~~~~~~~v~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~Dl~~~~~~~~~~~~~-----~   73 (317)
T TIGR01181         1 RILVTGGAGFIGSNFVRYILNEHPDAEVIVLDKLTYAGNLENLADLED--NPRYRFVKGDIGDRELVSRLFTEH-----Q   73 (317)
T ss_pred             CEEEEcCCchHHHHHHHHHHHhCCCCEEEEecCCCcchhhhhhhhhcc--CCCcEEEEcCCcCHHHHHHHHhhc-----C
Confidence            48999999999999999999987  6888887743211 111122211  236788999999999998888753     5


Q ss_pred             ccEEEEccccCCcccccccCChHHHHHHHHhhhHHHHHHHHHHhhhhhhcCCeEEEEcCccccccC------------CC
Q 044010          126 LDHLVNNAGISSVALFEDIVNITDFKQIMNINFWGSVYTTRFAVPHLRYTKGKIVVLSSAASWLTA------------PR  193 (248)
Q Consensus       126 id~vv~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~g~iV~isS~~~~~~~------------~~  193 (248)
                      +|++||+|+.....     .+.++++..+++|+.++..+++.+...+.  +.++|++||...+.+.            .+
T Consensus        74 ~d~vi~~a~~~~~~-----~~~~~~~~~~~~n~~~~~~l~~~~~~~~~--~~~~i~~Ss~~v~g~~~~~~~~~e~~~~~~  146 (317)
T TIGR01181        74 PDAVVHFAAESHVD-----RSISGPAAFIETNVVGTYTLLEAVRKYWH--EFRFHHISTDEVYGDLEKGDAFTETTPLAP  146 (317)
T ss_pred             CCEEEEcccccCch-----hhhhCHHHHHHHHHHHHHHHHHHHHhcCC--CceEEEeeccceeCCCCCCCCcCCCCCCCC
Confidence            99999999975432     12345677899999999999988765432  3479999986543321            12


Q ss_pred             CccchHHHHHHHHHHHHHHHHhCCCeEEEEEecCccccCc
Q 044010          194 MSFYNASKAALVLFFETLRVELGSDVGVTIVTPGFIESEL  233 (248)
Q Consensus       194 ~~~Y~~sKaal~~l~~~la~~~~~~i~v~~v~pg~v~T~~  233 (248)
                      ...|+.+|.+.+.+++.++.+++  +++..+.|+.+..+.
T Consensus       147 ~~~Y~~sK~~~e~~~~~~~~~~~--~~~~i~R~~~i~G~~  184 (317)
T TIGR01181       147 SSPYSASKAASDHLVRAYHRTYG--LPALITRCSNNYGPY  184 (317)
T ss_pred             CCchHHHHHHHHHHHHHHHHHhC--CCeEEEEeccccCCC
Confidence            34799999999999999988764  677778888766543

This protein is related to UDP-glucose 4-epimerase (GalE) and likewise has an NAD cofactor.

>PRK10084 dTDP-glucose 4,6 dehydratase; Provisional

Probab=99.73  E-value=2.7e-16  Score=138.32  Aligned_cols=168  Identities=14%  Similarity=0.091  Sum_probs=118.1

Q ss_pred             EEEEcCCCChHHHHHHHHHHHcCCe-EEEEeCCcchHHHHHHHHHhh-CCCcEEEEEccCCCHHHHHHHHHHHHhHcCCc
Q 044010           49 VVIITGASSGIGEHLAYEYARRGAC-LALCARREKSLEEVADTAREI-GSPDVITIRADVSKVDDCRSLVEETMNHFGRL  126 (248)
Q Consensus        49 ~~lVtGg~~gIG~aia~~l~~~G~~-V~l~~r~~~~~~~~~~~l~~~-~~~~v~~~~~D~~~~~~~~~~~~~~~~~~g~i  126 (248)
                      ++|||||+|+||.+++++|+++|++ |+.+++......  .+.+... ...++.++.+|++|.+++.+++++.     ++
T Consensus         2 kilITGgtG~iG~~l~~~L~~~g~~~v~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~Dl~d~~~~~~~~~~~-----~~   74 (352)
T PRK10084          2 KILVTGGAGFIGSAVVRHIINNTQDSVVNVDKLTYAGN--LESLADVSDSERYVFEHADICDRAELDRIFAQH-----QP   74 (352)
T ss_pred             eEEEECCCcHHhHHHHHHHHHhCCCeEEEecCCCccch--HHHHHhcccCCceEEEEecCCCHHHHHHHHHhc-----CC
Confidence            5899999999999999999999986 554555321111  1112111 1235778999999999999988752     79


Q ss_pred             cEEEEccccCCcccccccCChHHHHHHHHhhhHHHHHHHHHHhhhhhh------cCCeEEEEcCcccccc----------
Q 044010          127 DHLVNNAGISSVALFEDIVNITDFKQIMNINFWGSVYTTRFAVPHLRY------TKGKIVVLSSAASWLT----------  190 (248)
Q Consensus       127 d~vv~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~------~~g~iV~isS~~~~~~----------  190 (248)
                      |++||+||......     +.++.++.+++|+.++.++++.+.+.|.+      ...++|++||...+..          
T Consensus        75 d~vih~A~~~~~~~-----~~~~~~~~~~~N~~gt~~ll~~~~~~~~~~~~~~~~~~~~i~~SS~~vyg~~~~~~~~~~~  149 (352)
T PRK10084         75 DAVMHLAAESHVDR-----SITGPAAFIETNIVGTYVLLEAARNYWSALDEDKKNAFRFHHISTDEVYGDLPHPDEVENS  149 (352)
T ss_pred             CEEEECCcccCCcc-----hhcCchhhhhhhhHHHHHHHHHHHHhccccccccccceeEEEecchhhcCCCCcccccccc
Confidence            99999999754321     12334678999999999999999876531      1248999998654321          


Q ss_pred             -----------CCCCccchHHHHHHHHHHHHHHHHhCCCeEEEEEecCccc
Q 044010          191 -----------APRMSFYNASKAALVLFFETLRVELGSDVGVTIVTPGFIE  230 (248)
Q Consensus       191 -----------~~~~~~Y~~sKaal~~l~~~la~~~~~~i~v~~v~pg~v~  230 (248)
                                 ..+...|+.||.+.+.+++.++.+++.  ++..+.|+.+.
T Consensus       150 ~~~~~~~E~~~~~p~~~Y~~sK~~~E~~~~~~~~~~g~--~~vilr~~~v~  198 (352)
T PRK10084        150 EELPLFTETTAYAPSSPYSASKASSDHLVRAWLRTYGL--PTIVTNCSNNY  198 (352)
T ss_pred             ccCCCccccCCCCCCChhHHHHHHHHHHHHHHHHHhCC--CEEEEecccee
Confidence                       123458999999999999999888764  33334444443

>COG1087 GalE UDP-glucose 4-epimerase [Cell envelope biogenesis, outer membrane]

Probab=99.72  E-value=3e-16  Score=131.32  Aligned_cols=150  Identities=16%  Similarity=0.135  Sum_probs=120.3

Q ss_pred             CEEEEcCCCChHHHHHHHHHHHcCCeEEEEeCCcchHHHHHHHHHhhCCCcEEEEEccCCCHHHHHHHHHHHHhHcCCcc
Q 044010           48 KVVIITGASSGIGEHLAYEYARRGACLALCARREKSLEEVADTAREIGSPDVITIRADVSKVDDCRSLVEETMNHFGRLD  127 (248)
Q Consensus        48 k~~lVtGg~~gIG~aia~~l~~~G~~V~l~~r~~~~~~~~~~~l~~~~~~~v~~~~~D~~~~~~~~~~~~~~~~~~g~id  127 (248)
                      +++|||||+|.||.+++.+|++.|++|++.+.-.....+..+..      ...+++.|+.|.+.+++++++-     +||
T Consensus         1 ~~iLVtGGAGYIGSHtv~~Ll~~G~~vvV~DNL~~g~~~~v~~~------~~~f~~gDi~D~~~L~~vf~~~-----~id   69 (329)
T COG1087           1 MKVLVTGGAGYIGSHTVRQLLKTGHEVVVLDNLSNGHKIALLKL------QFKFYEGDLLDRALLTAVFEEN-----KID   69 (329)
T ss_pred             CeEEEecCcchhHHHHHHHHHHCCCeEEEEecCCCCCHHHhhhc------cCceEEeccccHHHHHHHHHhc-----CCC
Confidence            47999999999999999999999999999999765544444322      1578999999999999999874     899


Q ss_pred             EEEEccccCCcccccccCChHHHHHHHHhhhHHHHHHHHHHhhhhhhcCCeEEEEcCccccccC-----------CCCcc
Q 044010          128 HLVNNAGISSVALFEDIVNITDFKQIMNINFWGSVYTTRFAVPHLRYTKGKIVVLSSAASWLTA-----------PRMSF  196 (248)
Q Consensus       128 ~vv~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~g~iV~isS~~~~~~~-----------~~~~~  196 (248)
                      .|+|-||....+     .+.+...+.++.|+.|++.|+++....   ....+||-||++.+...           .+..+
T Consensus        70 aViHFAa~~~Vg-----ESv~~Pl~Yy~NNv~gTl~Ll~am~~~---gv~~~vFSStAavYG~p~~~PI~E~~~~~p~NP  141 (329)
T COG1087          70 AVVHFAASISVG-----ESVQNPLKYYDNNVVGTLNLIEAMLQT---GVKKFIFSSTAAVYGEPTTSPISETSPLAPINP  141 (329)
T ss_pred             EEEECccccccc-----hhhhCHHHHHhhchHhHHHHHHHHHHh---CCCEEEEecchhhcCCCCCcccCCCCCCCCCCc
Confidence            999999977654     255777899999999999999986533   22467777766654311           13458


Q ss_pred             chHHHHHHHHHHHHHHHHhC
Q 044010          197 YNASKAALVLFFETLRVELG  216 (248)
Q Consensus       197 Y~~sKaal~~l~~~la~~~~  216 (248)
                      ||.||...+.+.+.+++.++
T Consensus       142 YG~sKlm~E~iL~d~~~a~~  161 (329)
T COG1087         142 YGRSKLMSEEILRDAAKANP  161 (329)
T ss_pred             chhHHHHHHHHHHHHHHhCC
Confidence            99999999999999999986

>PLN02686 cinnamoyl-CoA reductase

Probab=99.71  E-value=6.1e-16  Score=137.15  Aligned_cols=174  Identities=14%  Similarity=0.144  Sum_probs=126.9

Q ss_pred             CCCCCEEEEcCCCChHHHHHHHHHHHcCCeEEEEeCCcchHHHHHHHHHhhC-----CCcEEEEEccCCCHHHHHHHHHH
Q 044010           44 DVSGKVVIITGASSGIGEHLAYEYARRGACLALCARREKSLEEVADTAREIG-----SPDVITIRADVSKVDDCRSLVEE  118 (248)
Q Consensus        44 ~~~~k~~lVtGg~~gIG~aia~~l~~~G~~V~l~~r~~~~~~~~~~~l~~~~-----~~~v~~~~~D~~~~~~~~~~~~~  118 (248)
                      ++++|++|||||+|+||.+++++|+++|++|+++.|+.+..+.. +.+...+     ...+.++.+|++|.+++.++++ 
T Consensus        50 ~~~~k~VLVTGatGfIG~~lv~~L~~~G~~V~~~~r~~~~~~~l-~~l~~~~~~~~~~~~~~~v~~Dl~d~~~l~~~i~-  127 (367)
T PLN02686         50 DAEARLVCVTGGVSFLGLAIVDRLLRHGYSVRIAVDTQEDKEKL-REMEMFGEMGRSNDGIWTVMANLTEPESLHEAFD-  127 (367)
T ss_pred             CCCCCEEEEECCchHHHHHHHHHHHHCCCEEEEEeCCHHHHHHH-HHHhhhccccccCCceEEEEcCCCCHHHHHHHHH-
Confidence            67899999999999999999999999999999888876554433 2222111     1257889999999999988876 


Q ss_pred             HHhHcCCccEEEEccccCCcccccccCChHHHHHHHHhhhHHHHHHHHHHhhhhhhcCCeEEEEcCccc-ccc----C--
Q 044010          119 TMNHFGRLDHLVNNAGISSVALFEDIVNITDFKQIMNINFWGSVYTTRFAVPHLRYTKGKIVVLSSAAS-WLT----A--  191 (248)
Q Consensus       119 ~~~~~g~id~vv~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~g~iV~isS~~~-~~~----~--  191 (248)
                            .+|.++|.++...+.....     ......++|+.+..++++++...-  ...++|++||..+ .++    .  
T Consensus       128 ------~~d~V~hlA~~~~~~~~~~-----~~~~~~~~nv~gt~~llea~~~~~--~v~r~V~~SS~~~~vyg~~~~~~~  194 (367)
T PLN02686        128 ------GCAGVFHTSAFVDPAGLSG-----YTKSMAELEAKASENVIEACVRTE--SVRKCVFTSSLLACVWRQNYPHDL  194 (367)
T ss_pred             ------hccEEEecCeeeccccccc-----ccchhhhhhHHHHHHHHHHHHhcC--CccEEEEeccHHHhcccccCCCCC
Confidence                  4789999998764332111     112345678899988888865321  1248999999631 110    0  


Q ss_pred             C----------------CCccchHHHHHHHHHHHHHHHHhCCCeEEEEEecCccccCcc
Q 044010          192 P----------------RMSFYNASKAALVLFFETLRVELGSDVGVTIVTPGFIESELT  234 (248)
Q Consensus       192 ~----------------~~~~Y~~sKaal~~l~~~la~~~~~~i~v~~v~pg~v~T~~~  234 (248)
                      +                +...|+.||.+.+.+++.+++++  +++++++.|+.|.+|-.
T Consensus       195 ~~~i~E~~~~~~~~~~~p~~~Y~~sK~~~E~~~~~~~~~~--gl~~v~lRp~~vyGp~~  251 (367)
T PLN02686        195 PPVIDEESWSDESFCRDNKLWYALGKLKAEKAAWRAARGK--GLKLATICPALVTGPGF  251 (367)
T ss_pred             CcccCCCCCCChhhcccccchHHHHHHHHHHHHHHHHHhc--CceEEEEcCCceECCCC
Confidence            0                12369999999999999888775  59999999999998853

>PF02719 Polysacc_synt_2: Polysaccharide biosynthesis protein; InterPro: IPR003869 This domain is found in diverse bacterial polysaccharide biosynthesis proteins including the CapD protein from Staphylococcus aureus [], the WalL protein, mannosyl-transferase [], and several putative epimerases

Probab=99.71  E-value=6.1e-17  Score=136.99  Aligned_cols=164  Identities=24%  Similarity=0.311  Sum_probs=120.9

Q ss_pred             EEEcCCCChHHHHHHHHHHHcCC-eEEEEeCCcchHHHHHHHHHhhCC-CcE----EEEEccCCCHHHHHHHHHHHHhHc
Q 044010           50 VIITGASSGIGEHLAYEYARRGA-CLALCARREKSLEEVADTAREIGS-PDV----ITIRADVSKVDDCRSLVEETMNHF  123 (248)
Q Consensus        50 ~lVtGg~~gIG~aia~~l~~~G~-~V~l~~r~~~~~~~~~~~l~~~~~-~~v----~~~~~D~~~~~~~~~~~~~~~~~~  123 (248)
                      +|||||+|.||.+++++|++.+. ++++++|++.++-...+++++..+ .++    ..+.+|++|.+.++.++++.    
T Consensus         1 VLVTGa~GSIGseL~rql~~~~p~~lil~d~~E~~l~~l~~~l~~~~~~~~v~~~~~~vigDvrd~~~l~~~~~~~----   76 (293)
T PF02719_consen    1 VLVTGAGGSIGSELVRQLLRYGPKKLILFDRDENKLYELERELRSRFPDPKVRFEIVPVIGDVRDKERLNRIFEEY----   76 (293)
T ss_dssp             EEEETTTSHHHHHHHHHHHCCB-SEEEEEES-HHHHHHHHHHCHHHC--TTCEEEEE--CTSCCHHHHHHHHTT------
T ss_pred             CEEEccccHHHHHHHHHHHhcCCCeEEEeCCChhHHHHHHHHHhhcccccCcccccCceeecccCHHHHHHHHhhc----
Confidence            69999999999999999999986 899999999998888888865543 234    34579999999999998764    


Q ss_pred             CCccEEEEccccCCcccccccCChHHHHHHHHhhhHHHHHHHHHHhhhhhhcCCeEEEEcCccccccCCCCccchHHHHH
Q 044010          124 GRLDHLVNNAGISSVALFEDIVNITDFKQIMNINFWGSVYTTRFAVPHLRYTKGKIVVLSSAASWLTAPRMSFYNASKAA  203 (248)
Q Consensus       124 g~id~vv~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~g~iV~isS~~~~~~~~~~~~Y~~sKaa  203 (248)
                       ++|+++|.|+.-.....+     +...+.+.+|+.|+.++++++...   .-.++|++||.-+..|   ...||+||..
T Consensus        77 -~pdiVfHaAA~KhVpl~E-----~~p~eav~tNv~GT~nv~~aa~~~---~v~~~v~ISTDKAv~P---tnvmGatKrl  144 (293)
T PF02719_consen   77 -KPDIVFHAAALKHVPLME-----DNPFEAVKTNVLGTQNVAEAAIEH---GVERFVFISTDKAVNP---TNVMGATKRL  144 (293)
T ss_dssp             -T-SEEEE------HHHHC-----CCHHHHHHHHCHHHHHHHHHHHHT---T-SEEEEEEECGCSS-----SHHHHHHHH
T ss_pred             -CCCEEEEChhcCCCChHH-----hCHHHHHHHHHHHHHHHHHHHHHc---CCCEEEEccccccCCC---CcHHHHHHHH
Confidence             899999999976554333     235678999999999999998754   3359999999888776   4689999999


Q ss_pred             HHHHHHHHHHHhCC-CeEEEEEecCcc
Q 044010          204 LVLFFETLRVELGS-DVGVTIVTPGFI  229 (248)
Q Consensus       204 l~~l~~~la~~~~~-~i~v~~v~pg~v  229 (248)
                      .+.++.+.+...+. +.++.+|.=|-|
T Consensus       145 aE~l~~~~~~~~~~~~t~f~~VRFGNV  171 (293)
T PF02719_consen  145 AEKLVQAANQYSGNSDTKFSSVRFGNV  171 (293)
T ss_dssp             HHHHHHHHCCTSSSS--EEEEEEE-EE
T ss_pred             HHHHHHHHhhhCCCCCcEEEEEEecce
Confidence            99999999998844 366766666644

The CapD protein is required for biosynthesis of type 1 capsular polysaccharide.; GO: 0009058 biosynthetic process; PDB: 3PVZ_C 2GN8_B 2GN4_A 2GNA_B 2GN6_A 2GN9_A.

>TIGR01179 galE UDP-glucose-4-epimerase

Probab=99.69  E-value=1.6e-15  Score=131.40  Aligned_cols=168  Identities=17%  Similarity=0.175  Sum_probs=122.4

Q ss_pred             EEEEcCCCChHHHHHHHHHHHcCCeEEEEeCCcchHHHHHHHHHhhCCCcEEEEEccCCCHHHHHHHHHHHHhHcCCccE
Q 044010           49 VVIITGASSGIGEHLAYEYARRGACLALCARREKSLEEVADTAREIGSPDVITIRADVSKVDDCRSLVEETMNHFGRLDH  128 (248)
Q Consensus        49 ~~lVtGg~~gIG~aia~~l~~~G~~V~l~~r~~~~~~~~~~~l~~~~~~~v~~~~~D~~~~~~~~~~~~~~~~~~g~id~  128 (248)
                      ++|||||+|+||.+++++|+++|++|++++|.............+.+  ++..+.+|+++.++++++++.     +++|+
T Consensus         1 kvlV~GatG~iG~~l~~~l~~~g~~V~~~~~~~~~~~~~~~~~~~~~--~~~~~~~D~~~~~~~~~~~~~-----~~~d~   73 (328)
T TIGR01179         1 KILVTGGAGYIGSHTVRQLLESGHEVVVLDNLSNGSPEALKRGERIT--RVTFVEGDLRDRELLDRLFEE-----HKIDA   73 (328)
T ss_pred             CEEEeCCCCHHHHHHHHHHHhCCCeEEEEeCCCccchhhhhhhcccc--ceEEEECCCCCHHHHHHHHHh-----CCCcE
Confidence            47899999999999999999999999888765433222222222211  577889999999999988874     47999


Q ss_pred             EEEccccCCcccccccCChHHHHHHHHhhhHHHHHHHHHHhhhhhhcCCeEEEEcCccccccC-----------CCCccc
Q 044010          129 LVNNAGISSVALFEDIVNITDFKQIMNINFWGSVYTTRFAVPHLRYTKGKIVVLSSAASWLTA-----------PRMSFY  197 (248)
Q Consensus       129 vv~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~g~iV~isS~~~~~~~-----------~~~~~Y  197 (248)
                      +||+||......     ..++..+.+..|+.++..+++.+...   ..+++|++||...+...           .+...|
T Consensus        74 vv~~ag~~~~~~-----~~~~~~~~~~~n~~~~~~l~~~~~~~---~~~~~v~~ss~~~~g~~~~~~~~e~~~~~~~~~y  145 (328)
T TIGR01179        74 VIHFAGLIAVGE-----SVQDPLKYYRNNVVNTLNLLEAMQQT---GVKKFIFSSSAAVYGEPSSIPISEDSPLGPINPY  145 (328)
T ss_pred             EEECccccCcch-----hhcCchhhhhhhHHHHHHHHHHHHhc---CCCEEEEecchhhcCCCCCCCccccCCCCCCCch
Confidence            999999754321     22345567889999999998875432   23689999886543211           123679


Q ss_pred             hHHHHHHHHHHHHHHHHhCCCeEEEEEecCccccC
Q 044010          198 NASKAALVLFFETLRVELGSDVGVTIVTPGFIESE  232 (248)
Q Consensus       198 ~~sKaal~~l~~~la~~~~~~i~v~~v~pg~v~T~  232 (248)
                      +.+|++.+.+++.++++. .++++..+.|+.+..+
T Consensus       146 ~~sK~~~e~~~~~~~~~~-~~~~~~ilR~~~v~g~  179 (328)
T TIGR01179       146 GRSKLMSERILRDLSKAD-PGLSYVILRYFNVAGA  179 (328)
T ss_pred             HHHHHHHHHHHHHHHHhc-cCCCEEEEecCcccCC
Confidence            999999999999998763 2477788888766554

This enzyme interconverts UDP-glucose and UDP-galactose. A set of related proteins, some of which are tentatively identified as UDP-glucose-4-epimerase in Thermotoga maritima, Bacillus halodurans, and several archaea, but deeply branched from this set and lacking experimental evidence, are excluded from this model and described separately.

>PLN02427 UDP-apiose/xylose synthase

Probab=99.69  E-value=1.3e-15  Score=135.78  Aligned_cols=173  Identities=15%  Similarity=0.154  Sum_probs=122.5

Q ss_pred             cCCCCCEEEEcCCCChHHHHHHHHHHHc-CCeEEEEeCCcchHHHHHHHHHhhCCCcEEEEEccCCCHHHHHHHHHHHHh
Q 044010           43 EDVSGKVVIITGASSGIGEHLAYEYARR-GACLALCARREKSLEEVADTAREIGSPDVITIRADVSKVDDCRSLVEETMN  121 (248)
Q Consensus        43 ~~~~~k~~lVtGg~~gIG~aia~~l~~~-G~~V~l~~r~~~~~~~~~~~l~~~~~~~v~~~~~D~~~~~~~~~~~~~~~~  121 (248)
                      ...+.+++|||||+|.||.+++++|+++ |++|+.++|+.++.+...+........++.++.+|++|.+++.++++    
T Consensus        10 ~~~~~~~VlVTGgtGfIGs~lv~~L~~~~g~~V~~l~r~~~~~~~l~~~~~~~~~~~~~~~~~Dl~d~~~l~~~~~----   85 (386)
T PLN02427         10 KPIKPLTICMIGAGGFIGSHLCEKLMTETPHKVLALDVYNDKIKHLLEPDTVPWSGRIQFHRINIKHDSRLEGLIK----   85 (386)
T ss_pred             CcccCcEEEEECCcchHHHHHHHHHHhcCCCEEEEEecCchhhhhhhccccccCCCCeEEEEcCCCChHHHHHHhh----
Confidence            3456678999999999999999999998 58999999876543322111000111368899999999988877764    


Q ss_pred             HcCCccEEEEccccCCcccccccCChHHHHHHHHhhhHHHHHHHHHHhhhhhhcCCeEEEEcCccccccC---------C
Q 044010          122 HFGRLDHLVNNAGISSVALFEDIVNITDFKQIMNINFWGSVYTTRFAVPHLRYTKGKIVVLSSAASWLTA---------P  192 (248)
Q Consensus       122 ~~g~id~vv~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~g~iV~isS~~~~~~~---------~  192 (248)
                         ++|+|||.|+...+....     ++..+.+..|+.+..++++++...    +.++|++||...+...         |
T Consensus        86 ---~~d~ViHlAa~~~~~~~~-----~~~~~~~~~n~~gt~~ll~aa~~~----~~r~v~~SS~~vYg~~~~~~~~e~~p  153 (386)
T PLN02427         86 ---MADLTINLAAICTPADYN-----TRPLDTIYSNFIDALPVVKYCSEN----NKRLIHFSTCEVYGKTIGSFLPKDHP  153 (386)
T ss_pred             ---cCCEEEEcccccChhhhh-----hChHHHHHHHHHHHHHHHHHHHhc----CCEEEEEeeeeeeCCCcCCCCCcccc
Confidence               489999999975432211     122344567999999998887532    2589999997543210         0


Q ss_pred             ------------------------CCccchHHHHHHHHHHHHHHHHhCCCeEEEEEecCccccCc
Q 044010          193 ------------------------RMSFYNASKAALVLFFETLRVELGSDVGVTIVTPGFIESEL  233 (248)
Q Consensus       193 ------------------------~~~~Y~~sKaal~~l~~~la~~~~~~i~v~~v~pg~v~T~~  233 (248)
                                              ....|+.||.+.+.+++.++..+  ++++..+.|+.|..+-
T Consensus       154 ~~~~~~~~~~~e~~~~~~~~~~~~~~~~Y~~sK~~~E~~~~~~~~~~--g~~~~ilR~~~vyGp~  216 (386)
T PLN02427        154 LRQDPAFYVLKEDESPCIFGSIEKQRWSYACAKQLIERLIYAEGAEN--GLEFTIVRPFNWIGPR  216 (386)
T ss_pred             cccccccccccccccccccCCCCccccchHHHHHHHHHHHHHHHhhc--CCceEEecccceeCCC
Confidence                                    11369999999999998776654  4788888888777653

>TIGR03466 HpnA hopanoid-associated sugar epimerase

Probab=99.68  E-value=1.6e-15  Score=131.71  Aligned_cols=159  Identities=19%  Similarity=0.153  Sum_probs=121.8

Q ss_pred             CEEEEcCCCChHHHHHHHHHHHcCCeEEEEeCCcchHHHHHHHHHhhCCCcEEEEEccCCCHHHHHHHHHHHHhHcCCcc
Q 044010           48 KVVIITGASSGIGEHLAYEYARRGACLALCARREKSLEEVADTAREIGSPDVITIRADVSKVDDCRSLVEETMNHFGRLD  127 (248)
Q Consensus        48 k~~lVtGg~~gIG~aia~~l~~~G~~V~l~~r~~~~~~~~~~~l~~~~~~~v~~~~~D~~~~~~~~~~~~~~~~~~g~id  127 (248)
                      ++++||||+|+||.++++.|+++|++|++++|+.++...    +.   ..++.++.+|++|.+++.++++       ++|
T Consensus         1 ~~vlItG~~G~iG~~l~~~L~~~g~~V~~~~r~~~~~~~----~~---~~~~~~~~~D~~~~~~l~~~~~-------~~d   66 (328)
T TIGR03466         1 MKVLVTGATGFVGSAVVRLLLEQGEEVRVLVRPTSDRRN----LE---GLDVEIVEGDLRDPASLRKAVA-------GCR   66 (328)
T ss_pred             CeEEEECCccchhHHHHHHHHHCCCEEEEEEecCccccc----cc---cCCceEEEeeCCCHHHHHHHHh-------CCC
Confidence            368999999999999999999999999999998754321    11   1257789999999998877765       689


Q ss_pred             EEEEccccCCcccccccCChHHHHHHHHhhhHHHHHHHHHHhhhhhhcCCeEEEEcCccccccCC---------------
Q 044010          128 HLVNNAGISSVALFEDIVNITDFKQIMNINFWGSVYTTRFAVPHLRYTKGKIVVLSSAASWLTAP---------------  192 (248)
Q Consensus       128 ~vv~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~g~iV~isS~~~~~~~~---------------  192 (248)
                      ++||+|+....       ..+++++.+++|+.++.++++.+...   ..+++|++||...+.+.+               
T Consensus        67 ~vi~~a~~~~~-------~~~~~~~~~~~n~~~~~~l~~~~~~~---~~~~~v~~SS~~~~~~~~~~~~~~e~~~~~~~~  136 (328)
T TIGR03466        67 ALFHVAADYRL-------WAPDPEEMYAANVEGTRNLLRAALEA---GVERVVYTSSVATLGVRGDGTPADETTPSSLDD  136 (328)
T ss_pred             EEEEeceeccc-------CCCCHHHHHHHHHHHHHHHHHHHHHh---CCCeEEEEechhhcCcCCCCCCcCccCCCCccc
Confidence            99999985421       11345678889999999999887532   236899999976654211               


Q ss_pred             CCccchHHHHHHHHHHHHHHHHhCCCeEEEEEecCccccC
Q 044010          193 RMSFYNASKAALVLFFETLRVELGSDVGVTIVTPGFIESE  232 (248)
Q Consensus       193 ~~~~Y~~sKaal~~l~~~la~~~~~~i~v~~v~pg~v~T~  232 (248)
                      ....|+.+|.+.+.+++.++.++  ++++..+.|+.+..+
T Consensus       137 ~~~~Y~~sK~~~e~~~~~~~~~~--~~~~~ilR~~~~~G~  174 (328)
T TIGR03466       137 MIGHYKRSKFLAEQAALEMAAEK--GLPVVIVNPSTPIGP  174 (328)
T ss_pred             ccChHHHHHHHHHHHHHHHHHhc--CCCEEEEeCCccCCC
Confidence            13479999999999999988765  477888888877554

The sequences in this family are members of the pfam01370 superfamily of NAD-dependent epimerases and dehydratases typically acting on nucleotide-sugar substrates. The genes of the family modeled here are generally in the same locus with genes involved in the biosynthesis and elaboration of hopene, the cyclization product of the polyisoprenoid squalene.

>PF01073 3Beta_HSD: 3-beta hydroxysteroid dehydrogenase/isomerase family; InterPro: IPR002225 The enzyme 3 beta-hydroxysteroid dehydrogenase/5-ene-4-ene isomerase (3 beta-HSD) catalyses the oxidation and isomerisation of 5-ene-3 beta-hydroxypregnene and 5-ene-hydroxyandrostene steroid precursors into the corresponding 4-ene-ketosteroids necessary for the formation of all classes of steroid hormones

Probab=99.65  E-value=3.5e-15  Score=127.51  Aligned_cols=163  Identities=18%  Similarity=0.134  Sum_probs=123.9

Q ss_pred             EEcCCCChHHHHHHHHHHHcC--CeEEEEeCCcchHHHHHHHHHhhCCCcEEEEEccCCCHHHHHHHHHHHHhHcCCccE
Q 044010           51 IITGASSGIGEHLAYEYARRG--ACLALCARREKSLEEVADTAREIGSPDVITIRADVSKVDDCRSLVEETMNHFGRLDH  128 (248)
Q Consensus        51 lVtGg~~gIG~aia~~l~~~G--~~V~l~~r~~~~~~~~~~~l~~~~~~~v~~~~~D~~~~~~~~~~~~~~~~~~g~id~  128 (248)
                      |||||+|.+|.+++++|+++|  ++|.+.++......  .+.+....  ...++.+|++|.+++.++++       ++|+
T Consensus         1 LVTGgsGflG~~iv~~Ll~~g~~~~Vr~~d~~~~~~~--~~~~~~~~--~~~~~~~Di~d~~~l~~a~~-------g~d~   69 (280)
T PF01073_consen    1 LVTGGSGFLGSHIVRQLLERGYIYEVRVLDRSPPPKF--LKDLQKSG--VKEYIQGDITDPESLEEALE-------GVDV   69 (280)
T ss_pred             CEEcCCcHHHHHHHHHHHHCCCceEEEEccccccccc--chhhhccc--ceeEEEeccccHHHHHHHhc-------CCce
Confidence            699999999999999999999  68998888765322  11122111  23389999999999999886       6899


Q ss_pred             EEEccccCCcccccccCChHHHHHHHHhhhHHHHHHHHHHhhhhhhcCCeEEEEcCcccccc---C--------------
Q 044010          129 LVNNAGISSVALFEDIVNITDFKQIMNINFWGSVYTTRFAVPHLRYTKGKIVVLSSAASWLT---A--------------  191 (248)
Q Consensus       129 vv~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~g~iV~isS~~~~~~---~--------------  191 (248)
                      |+|.|+......      ....++.+++|+.|+-++++++...   .-.++|++||..++.+   .              
T Consensus        70 V~H~Aa~~~~~~------~~~~~~~~~vNV~GT~nvl~aa~~~---~VkrlVytSS~~vv~~~~~~~~~~~~dE~~~~~~  140 (280)
T PF01073_consen   70 VFHTAAPVPPWG------DYPPEEYYKVNVDGTRNVLEAARKA---GVKRLVYTSSISVVFDNYKGDPIINGDEDTPYPS  140 (280)
T ss_pred             EEEeCccccccC------cccHHHHHHHHHHHHHHHHHHHHHc---CCCEEEEEcCcceeEeccCCCCcccCCcCCcccc
Confidence            999999765432      2445788999999999999988643   3368999999887654   1              


Q ss_pred             CCCccchHHHHHHHHHHHHHHH-Hh--CCCeEEEEEecCccccCc
Q 044010          192 PRMSFYNASKAALVLFFETLRV-EL--GSDVGVTIVTPGFIESEL  233 (248)
Q Consensus       192 ~~~~~Y~~sKaal~~l~~~la~-~~--~~~i~v~~v~pg~v~T~~  233 (248)
                      .....|+.||+.-|.++..... ++  +++++..+|.|..|.-|-
T Consensus       141 ~~~~~Y~~SK~~AE~~V~~a~~~~~~~g~~l~t~~lRP~~IyGp~  185 (280)
T PF01073_consen  141 SPLDPYAESKALAEKAVLEANGSELKNGGRLRTCALRPAGIYGPG  185 (280)
T ss_pred             cccCchHHHHHHHHHHHHhhcccccccccceeEEEEeccEEeCcc
Confidence            1234799999999999887665 22  234888899999887764

3Beta_HSD; GO: 0003854 3-beta-hydroxy-delta5-steroid dehydrogenase activity, 0016616 oxidoreductase activity, acting on the CH-OH group of donors, NAD or NADP as acceptor, 0006694 steroid biosynthetic process, 0055114 oxidation-reduction process

>PLN00141 Tic62-NAD(P)-related group II protein; Provisional

Probab=99.65  E-value=1e-14  Score=122.59  Aligned_cols=170  Identities=16%  Similarity=0.165  Sum_probs=113.4

Q ss_pred             cCCCCCEEEEcCCCChHHHHHHHHHHHcCCeEEEEeCCcchHHHHHHHHHhhCCCcEEEEEccCCCH-HHHHHHHHHHHh
Q 044010           43 EDVSGKVVIITGASSGIGEHLAYEYARRGACLALCARREKSLEEVADTAREIGSPDVITIRADVSKV-DDCRSLVEETMN  121 (248)
Q Consensus        43 ~~~~~k~~lVtGg~~gIG~aia~~l~~~G~~V~l~~r~~~~~~~~~~~l~~~~~~~v~~~~~D~~~~-~~~~~~~~~~~~  121 (248)
                      ++.++++++||||+|+||++++++|+++|++|+++.|+.++.+..   ...  +..+.++.+|+++. +++.+.+   . 
T Consensus        13 ~~~~~~~ilItGasG~iG~~l~~~L~~~g~~V~~~~R~~~~~~~~---~~~--~~~~~~~~~Dl~d~~~~l~~~~---~-   83 (251)
T PLN00141         13 ENVKTKTVFVAGATGRTGKRIVEQLLAKGFAVKAGVRDVDKAKTS---LPQ--DPSLQIVRADVTEGSDKLVEAI---G-   83 (251)
T ss_pred             ccccCCeEEEECCCcHHHHHHHHHHHhCCCEEEEEecCHHHHHHh---ccc--CCceEEEEeeCCCCHHHHHHHh---h-
Confidence            456789999999999999999999999999999999987653322   111  22688899999984 3222221   0 


Q ss_pred             HcCCccEEEEccccCCcccccccCChHHHHHHHHhhhHHHHHHHHHHhhhhhhcCCeEEEEcCcccccc---CCCCccch
Q 044010          122 HFGRLDHLVNNAGISSVALFEDIVNITDFKQIMNINFWGSVYTTRFAVPHLRYTKGKIVVLSSAASWLT---APRMSFYN  198 (248)
Q Consensus       122 ~~g~id~vv~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~g~iV~isS~~~~~~---~~~~~~Y~  198 (248)
                        .++|++|+++|........         ..+++|..+...+++++.   ....+++|++||...+..   .+....|.
T Consensus        84 --~~~d~vi~~~g~~~~~~~~---------~~~~~n~~~~~~ll~a~~---~~~~~~iV~iSS~~v~g~~~~~~~~~~~~  149 (251)
T PLN00141         84 --DDSDAVICATGFRRSFDPF---------APWKVDNFGTVNLVEACR---KAGVTRFILVSSILVNGAAMGQILNPAYI  149 (251)
T ss_pred             --cCCCEEEECCCCCcCCCCC---------CceeeehHHHHHHHHHHH---HcCCCEEEEEccccccCCCcccccCcchh
Confidence              2699999999864321110         124578888888888864   223479999999865332   22234576


Q ss_pred             HHHHHHHHH-HHHHHHHh-CC-CeEEEEEecCccccCccc
Q 044010          199 ASKAALVLF-FETLRVEL-GS-DVGVTIVTPGFIESELTQ  235 (248)
Q Consensus       199 ~sKaal~~l-~~~la~~~-~~-~i~v~~v~pg~v~T~~~~  235 (248)
                      ..|.+...+ .+..+.++ .. +++++.|.||++.++...
T Consensus       150 ~~~~~~~~~~~k~~~e~~l~~~gi~~~iirpg~~~~~~~~  189 (251)
T PLN00141        150 FLNLFGLTLVAKLQAEKYIRKSGINYTIVRPGGLTNDPPT  189 (251)
T ss_pred             HHHHHHHHHHHHHHHHHHHHhcCCcEEEEECCCccCCCCC
Confidence            666544433 23333322 33 599999999999877543

>COG1088 RfbB dTDP-D-glucose 4,6-dehydratase [Cell envelope biogenesis, outer membrane]

Probab=99.63  E-value=1.7e-14  Score=120.47  Aligned_cols=156  Identities=19%  Similarity=0.165  Sum_probs=118.8

Q ss_pred             CEEEEcCCCChHHHHHHHHHHHcCC--eEEEEeCC--cchHHHHHHHHHhhCCCcEEEEEccCCCHHHHHHHHHHHHhHc
Q 044010           48 KVVIITGASSGIGEHLAYEYARRGA--CLALCARR--EKSLEEVADTAREIGSPDVITIRADVSKVDDCRSLVEETMNHF  123 (248)
Q Consensus        48 k~~lVtGg~~gIG~aia~~l~~~G~--~V~l~~r~--~~~~~~~~~~l~~~~~~~v~~~~~D~~~~~~~~~~~~~~~~~~  123 (248)
                      +++|||||+|.||.++++.+.++..  +|+.++.=  ....+.. ..+..  ..+..+++.|+.|.+.+.+++++-    
T Consensus         1 ~~iLVTGGaGFIGsnfvr~~~~~~~d~~v~~~DkLTYAgn~~~l-~~~~~--~~~~~fv~~DI~D~~~v~~~~~~~----   73 (340)
T COG1088           1 MKILVTGGAGFIGSNFVRYILNKHPDDHVVNLDKLTYAGNLENL-ADVED--SPRYRFVQGDICDRELVDRLFKEY----   73 (340)
T ss_pred             CcEEEecCcchHHHHHHHHHHhcCCCceEEEEecccccCCHHHH-Hhhhc--CCCceEEeccccCHHHHHHHHHhc----
Confidence            4789999999999999999998754  57777661  1222222 22222  237899999999999999998863    


Q ss_pred             CCccEEEEccccCCcccccccCChHHHHHHHHhhhHHHHHHHHHHhhhhhhcCCeEEEEcCccccc-------------c
Q 044010          124 GRLDHLVNNAGISSVALFEDIVNITDFKQIMNINFWGSVYTTRFAVPHLRYTKGKIVVLSSAASWL-------------T  190 (248)
Q Consensus       124 g~id~vv~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~g~iV~isS~~~~~-------------~  190 (248)
                       ++|+++|-|+=....     .+.++...-+++|+.|++.|++++..+..+  -+++.+|+...+.             +
T Consensus        74 -~~D~VvhfAAESHVD-----RSI~~P~~Fi~TNv~GT~~LLEaar~~~~~--frf~HISTDEVYG~l~~~~~~FtE~tp  145 (340)
T COG1088          74 -QPDAVVHFAAESHVD-----RSIDGPAPFIQTNVVGTYTLLEAARKYWGK--FRFHHISTDEVYGDLGLDDDAFTETTP  145 (340)
T ss_pred             -CCCeEEEechhcccc-----ccccChhhhhhcchHHHHHHHHHHHHhccc--ceEEEeccccccccccCCCCCcccCCC
Confidence             799999999844322     245666778889999999999999876532  3789999877653             2


Q ss_pred             CCCCccchHHHHHHHHHHHHHHHHhCCC
Q 044010          191 APRMSFYNASKAALVLFFETLRVELGSD  218 (248)
Q Consensus       191 ~~~~~~Y~~sKaal~~l~~~la~~~~~~  218 (248)
                      ..+.++|++|||+-..|++++.+.|+-.
T Consensus       146 ~~PsSPYSASKAasD~lVray~~TYglp  173 (340)
T COG1088         146 YNPSSPYSASKAASDLLVRAYVRTYGLP  173 (340)
T ss_pred             CCCCCCcchhhhhHHHHHHHHHHHcCCc
Confidence            3456799999999999999999999743

>PF01370 Epimerase: NAD dependent epimerase/dehydratase family; InterPro: IPR001509 This family of proteins utilise NAD as a cofactor

Probab=99.62  E-value=4.7e-14  Score=116.72  Aligned_cols=163  Identities=23%  Similarity=0.265  Sum_probs=127.4

Q ss_pred             EEEcCCCChHHHHHHHHHHHcCCeEEEEeCCcchHHHHHHHHHhhCCCcEEEEEccCCCHHHHHHHHHHHHhHcCCccEE
Q 044010           50 VIITGASSGIGEHLAYEYARRGACLALCARREKSLEEVADTAREIGSPDVITIRADVSKVDDCRSLVEETMNHFGRLDHL  129 (248)
Q Consensus        50 ~lVtGg~~gIG~aia~~l~~~G~~V~l~~r~~~~~~~~~~~l~~~~~~~v~~~~~D~~~~~~~~~~~~~~~~~~g~id~v  129 (248)
                      +|||||+|.||.+++++|+++|++|+...|..........+.      ++.++.+|++|.++++++++..     .+|.+
T Consensus         1 IlI~GatG~iG~~l~~~l~~~g~~v~~~~~~~~~~~~~~~~~------~~~~~~~dl~~~~~~~~~~~~~-----~~d~v   69 (236)
T PF01370_consen    1 ILITGATGFIGSALVRQLLKKGHEVIVLSRSSNSESFEEKKL------NVEFVIGDLTDKEQLEKLLEKA-----NIDVV   69 (236)
T ss_dssp             EEEETTTSHHHHHHHHHHHHTTTEEEEEESCSTGGHHHHHHT------TEEEEESETTSHHHHHHHHHHH-----TESEE
T ss_pred             EEEEccCCHHHHHHHHHHHHcCCccccccccccccccccccc------eEEEEEeecccccccccccccc-----CceEE
Confidence            699999999999999999999999888888765433322222      6889999999999999999876     79999


Q ss_pred             EEccccCCcccccccCChHHHHHHHHhhhHHHHHHHHHHhhhhhhcCCeEEEEcCccccccCC-----------CCccch
Q 044010          130 VNNAGISSVALFEDIVNITDFKQIMNINFWGSVYTTRFAVPHLRYTKGKIVVLSSAASWLTAP-----------RMSFYN  198 (248)
Q Consensus       130 v~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~g~iV~isS~~~~~~~~-----------~~~~Y~  198 (248)
                      +|.|+.....     .+.++....++.|+.+..++++.+...   ...++|++||...+....           +...|+
T Consensus        70 i~~a~~~~~~-----~~~~~~~~~~~~n~~~~~~ll~~~~~~---~~~~~i~~sS~~~y~~~~~~~~~e~~~~~~~~~Y~  141 (236)
T PF01370_consen   70 IHLAAFSSNP-----ESFEDPEEIIEANVQGTRNLLEAAREA---GVKRFIFLSSASVYGDPDGEPIDEDSPINPLSPYG  141 (236)
T ss_dssp             EEEBSSSSHH-----HHHHSHHHHHHHHHHHHHHHHHHHHHH---TTSEEEEEEEGGGGTSSSSSSBETTSGCCHSSHHH
T ss_pred             EEeecccccc-----ccccccccccccccccccccccccccc---ccccccccccccccccccccccccccccccccccc
Confidence            9999975411     122556778888999998888887633   235999999965543321           234699


Q ss_pred             HHHHHHHHHHHHHHHHhCCCeEEEEEecCccccCc
Q 044010          199 ASKAALVLFFETLRVELGSDVGVTIVTPGFIESEL  233 (248)
Q Consensus       199 ~sKaal~~l~~~la~~~~~~i~v~~v~pg~v~T~~  233 (248)
                      .+|...+.+.+.+.++.  ++++..+.|+.+-.+.
T Consensus       142 ~~K~~~e~~~~~~~~~~--~~~~~~~R~~~vyG~~  174 (236)
T PF01370_consen  142 ASKRAAEELLRDYAKKY--GLRVTILRPPNVYGPG  174 (236)
T ss_dssp             HHHHHHHHHHHHHHHHH--TSEEEEEEESEEESTT
T ss_pred             ccccccccccccccccc--cccccccccccccccc
Confidence            99999999999998887  4788888998887766

The proteins in this family use nucleotide-sugar substrates for a variety of chemical reactions []. It contains the NAD(P)- binding domain (IPR016040 from INTERPRO) which is a commonly found domain with a core Rossmann-type fold. One of the best studied of these proteins is UDP-galactose 4-epimerase which catalyses the conversion of UDP-galactose to UDP-glucose during galactose metabolism [, ].; GO: 0003824 catalytic activity, 0050662 coenzyme binding, 0044237 cellular metabolic process; PDB: 2NNL_D 3C1T_B 3BXX_C 2IOD_C 2X4G_A 2Q1W_B 3SLG_B 1R66_A 1R6D_A 1KEU_B ....

>KOG1371 consensus UDP-glucose 4-epimerase/UDP-sulfoquinovose synthase [Cell wall/membrane/envelope biogenesis]

Probab=99.62  E-value=1e-14  Score=123.24  Aligned_cols=157  Identities=20%  Similarity=0.275  Sum_probs=124.3

Q ss_pred             CCEEEEcCCCChHHHHHHHHHHHcCCeEEEEeCCcchHHHHHHHHHhhCC--CcEEEEEccCCCHHHHHHHHHHHHhHcC
Q 044010           47 GKVVIITGASSGIGEHLAYEYARRGACLALCARREKSLEEVADTAREIGS--PDVITIRADVSKVDDCRSLVEETMNHFG  124 (248)
Q Consensus        47 ~k~~lVtGg~~gIG~aia~~l~~~G~~V~l~~r~~~~~~~~~~~l~~~~~--~~v~~~~~D~~~~~~~~~~~~~~~~~~g  124 (248)
                      ++++|||||+|.||.+.+.+|+++|+.|++++.-........+.+++..+  +++.++..|+.|.+.+++++++.     
T Consensus         2 ~~~VLVtGgaGyiGsht~l~L~~~gy~v~~vDNl~n~~~~sl~r~~~l~~~~~~v~f~~~Dl~D~~~L~kvF~~~-----   76 (343)
T KOG1371|consen    2 GKHVLVTGGAGYIGSHTVLALLKRGYGVVIVDNLNNSYLESLKRVRQLLGEGKSVFFVEGDLNDAEALEKLFSEV-----   76 (343)
T ss_pred             CcEEEEecCCcceehHHHHHHHhCCCcEEEEecccccchhHHHHHHHhcCCCCceEEEEeccCCHHHHHHHHhhc-----
Confidence            57999999999999999999999999999999855444444444444333  58999999999999999999876     


Q ss_pred             CccEEEEccccCCcccccccCChHHHHHHHHhhhHHHHHHHHHHhhhhhhcCCeEEEEcCcccccc-----------CC-
Q 044010          125 RLDHLVNNAGISSVALFEDIVNITDFKQIMNINFWGSVYTTRFAVPHLRYTKGKIVVLSSAASWLT-----------AP-  192 (248)
Q Consensus       125 ~id~vv~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~g~iV~isS~~~~~~-----------~~-  192 (248)
                      .+|.|+|-|+....+.     +.+......+.|+.|+++++......-   -..+|+.||...+..           .. 
T Consensus        77 ~fd~V~Hfa~~~~vge-----S~~~p~~Y~~nNi~gtlnlLe~~~~~~---~~~~V~sssatvYG~p~~ip~te~~~t~~  148 (343)
T KOG1371|consen   77 KFDAVMHFAALAAVGE-----SMENPLSYYHNNIAGTLNLLEVMKAHN---VKALVFSSSATVYGLPTKVPITEEDPTDQ  148 (343)
T ss_pred             CCceEEeehhhhccch-----hhhCchhheehhhhhHHHHHHHHHHcC---CceEEEecceeeecCcceeeccCcCCCCC
Confidence            6999999999776542     334557888999999999998855331   247888888665431           11 


Q ss_pred             CCccchHHHHHHHHHHHHHHHHhC
Q 044010          193 RMSFYNASKAALVLFFETLRVELG  216 (248)
Q Consensus       193 ~~~~Y~~sKaal~~l~~~la~~~~  216 (248)
                      +..+|+.+|.+++...+.....+.
T Consensus       149 p~~pyg~tK~~iE~i~~d~~~~~~  172 (343)
T KOG1371|consen  149 PTNPYGKTKKAIEEIIHDYNKAYG  172 (343)
T ss_pred             CCCcchhhhHHHHHHHHhhhcccc
Confidence            457899999999999999988875

>TIGR01746 Thioester-redct thioester reductase domain

Probab=99.62  E-value=4.5e-14  Score=124.06  Aligned_cols=167  Identities=20%  Similarity=0.218  Sum_probs=117.2

Q ss_pred             EEEEcCCCChHHHHHHHHHHHcC--CeEEEEeCCcchHH---HHHHHHHhhC------C-CcEEEEEccCCCHHH-H-HH
Q 044010           49 VVIITGASSGIGEHLAYEYARRG--ACLALCARREKSLE---EVADTAREIG------S-PDVITIRADVSKVDD-C-RS  114 (248)
Q Consensus        49 ~~lVtGg~~gIG~aia~~l~~~G--~~V~l~~r~~~~~~---~~~~~l~~~~------~-~~v~~~~~D~~~~~~-~-~~  114 (248)
                      +++||||+|+||.+++++|+++|  ++|+++.|+.+..+   ...+.++...      . .++.++.+|++++.- + .+
T Consensus         1 ~vlvtGatG~lG~~l~~~L~~~g~~~~V~~l~R~~~~~~~~~~l~~~~~~~~~~~~~~~~~~v~~~~~D~~~~~~gl~~~   80 (367)
T TIGR01746         1 TVLLTGATGFLGAYLLEELLRRSTQAKVICLVRAASEEHAMERLREALRSYRLWQEDLARERIEVVAGDLSEPRLGLSDA   80 (367)
T ss_pred             CEEEeccchHHHHHHHHHHHhCCCCCEEEEEEccCCHHHHHHHHHHHHHHhCCCCchhhhCCEEEEeCCcCcccCCcCHH
Confidence            48999999999999999999999  68999999765321   2222222211      0 378899999986521 0 11


Q ss_pred             HHHHHHhHcCCccEEEEccccCCcccccccCChHHHHHHHHhhhHHHHHHHHHHhhhhhhcCCeEEEEcCccccccCC--
Q 044010          115 LVEETMNHFGRLDHLVNNAGISSVALFEDIVNITDFKQIMNINFWGSVYTTRFAVPHLRYTKGKIVVLSSAASWLTAP--  192 (248)
Q Consensus       115 ~~~~~~~~~g~id~vv~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~g~iV~isS~~~~~~~~--  192 (248)
                      .+.++   ...+|++||+|+.....        ..++....+|+.++..+++.+...   ...+++++||...+....  
T Consensus        81 ~~~~~---~~~~d~vih~a~~~~~~--------~~~~~~~~~nv~g~~~ll~~a~~~---~~~~~v~iSS~~v~~~~~~~  146 (367)
T TIGR01746        81 EWERL---AENVDTIVHNGALVNWV--------YPYSELRAANVLGTREVLRLAASG---RAKPLHYVSTISVLAAIDLS  146 (367)
T ss_pred             HHHHH---HhhCCEEEeCCcEeccC--------CcHHHHhhhhhHHHHHHHHHHhhC---CCceEEEEccccccCCcCCC
Confidence            11222   13799999999965421        234566778999999998877542   224699999987654311  


Q ss_pred             --------------CCccchHHHHHHHHHHHHHHHHhCCCeEEEEEecCccccC
Q 044010          193 --------------RMSFYNASKAALVLFFETLRVELGSDVGVTIVTPGFIESE  232 (248)
Q Consensus       193 --------------~~~~Y~~sKaal~~l~~~la~~~~~~i~v~~v~pg~v~T~  232 (248)
                                    ....|+.||.+.+.+++.++..   +++++.+.||.+.++
T Consensus       147 ~~~~~~~~~~~~~~~~~~Y~~sK~~~E~~~~~~~~~---g~~~~i~Rpg~v~G~  197 (367)
T TIGR01746       147 TVTEDDAIVTPPPGLAGGYAQSKWVAELLVREASDR---GLPVTIVRPGRILGN  197 (367)
T ss_pred             CccccccccccccccCCChHHHHHHHHHHHHHHHhc---CCCEEEECCCceeec
Confidence                          1246999999999998876543   589999999999875

It has been suggested that a NADP-binding motif can be found in the N-terminal portion of this domain that may form a Rossman-type fold.

>PLN02695 GDP-D-mannose-3',5'-epimerase

Probab=99.58  E-value=8.2e-14  Score=123.73  Aligned_cols=164  Identities=18%  Similarity=0.098  Sum_probs=118.3

Q ss_pred             CCCEEEEcCCCChHHHHHHHHHHHcCCeEEEEeCCcchHHHHHHHHHhhCCCcEEEEEccCCCHHHHHHHHHHHHhHcCC
Q 044010           46 SGKVVIITGASSGIGEHLAYEYARRGACLALCARREKSLEEVADTAREIGSPDVITIRADVSKVDDCRSLVEETMNHFGR  125 (248)
Q Consensus        46 ~~k~~lVtGg~~gIG~aia~~l~~~G~~V~l~~r~~~~~~~~~~~l~~~~~~~v~~~~~D~~~~~~~~~~~~~~~~~~g~  125 (248)
                      +++++|||||+|.||.++++.|.++|++|+.++|.....      ..... ....++.+|+++.+++.++++       +
T Consensus        20 ~~~~IlVtGgtGfIG~~l~~~L~~~G~~V~~v~r~~~~~------~~~~~-~~~~~~~~Dl~d~~~~~~~~~-------~   85 (370)
T PLN02695         20 EKLRICITGAGGFIASHIARRLKAEGHYIIASDWKKNEH------MSEDM-FCHEFHLVDLRVMENCLKVTK-------G   85 (370)
T ss_pred             CCCEEEEECCccHHHHHHHHHHHhCCCEEEEEEeccccc------ccccc-ccceEEECCCCCHHHHHHHHh-------C
Confidence            678999999999999999999999999999999864321      11111 124678899999887766653       5


Q ss_pred             ccEEEEccccCCcccccccCChHHHHHHHHhhhHHHHHHHHHHhhhhhhcCCeEEEEcCccccc----------------
Q 044010          126 LDHLVNNAGISSVALFEDIVNITDFKQIMNINFWGSVYTTRFAVPHLRYTKGKIVVLSSAASWL----------------  189 (248)
Q Consensus       126 id~vv~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~g~iV~isS~~~~~----------------  189 (248)
                      +|+|||.|+.........    .+....+..|+.++.++++++...   ...++|++||...+.                
T Consensus        86 ~D~Vih~Aa~~~~~~~~~----~~~~~~~~~N~~~t~nll~aa~~~---~vk~~V~~SS~~vYg~~~~~~~~~~~~E~~~  158 (370)
T PLN02695         86 VDHVFNLAADMGGMGFIQ----SNHSVIMYNNTMISFNMLEAARIN---GVKRFFYASSACIYPEFKQLETNVSLKESDA  158 (370)
T ss_pred             CCEEEEcccccCCccccc----cCchhhHHHHHHHHHHHHHHHHHh---CCCEEEEeCchhhcCCccccCcCCCcCcccC
Confidence            899999998654322111    122345677999999999886522   235899999975432                


Q ss_pred             -cCCCCccchHHHHHHHHHHHHHHHHhCCCeEEEEEecCccccC
Q 044010          190 -TAPRMSFYNASKAALVLFFETLRVELGSDVGVTIVTPGFIESE  232 (248)
Q Consensus       190 -~~~~~~~Y~~sKaal~~l~~~la~~~~~~i~v~~v~pg~v~T~  232 (248)
                       +..+...|+.+|.+.+.+++.++..+  ++++..+.|+.+..|
T Consensus       159 ~p~~p~s~Yg~sK~~~E~~~~~~~~~~--g~~~~ilR~~~vyGp  200 (370)
T PLN02695        159 WPAEPQDAYGLEKLATEELCKHYTKDF--GIECRIGRFHNIYGP  200 (370)
T ss_pred             CCCCCCCHHHHHHHHHHHHHHHHHHHh--CCCEEEEEECCccCC
Confidence             11234579999999999999987775  367777788777665

>PRK08125 bifunctional UDP-glucuronic acid decarboxylase/UDP-4-amino-4-deoxy-L-arabinose formyltransferase; Validated

Probab=99.58  E-value=9.7e-14  Score=131.84  Aligned_cols=163  Identities=17%  Similarity=0.203  Sum_probs=119.1

Q ss_pred             CCCEEEEcCCCChHHHHHHHHHHHc-CCeEEEEeCCcchHHHHHHHHHhhCCCcEEEEEccCCCHHH-HHHHHHHHHhHc
Q 044010           46 SGKVVIITGASSGIGEHLAYEYARR-GACLALCARREKSLEEVADTAREIGSPDVITIRADVSKVDD-CRSLVEETMNHF  123 (248)
Q Consensus        46 ~~k~~lVtGg~~gIG~aia~~l~~~-G~~V~l~~r~~~~~~~~~~~l~~~~~~~v~~~~~D~~~~~~-~~~~~~~~~~~~  123 (248)
                      +++++|||||+|.||.+++++|+++ |++|+.++|+......    ..  ...++.++.+|++|..+ ++++++      
T Consensus       314 ~~~~VLVTGatGFIGs~Lv~~Ll~~~g~~V~~l~r~~~~~~~----~~--~~~~~~~~~gDl~d~~~~l~~~l~------  381 (660)
T PRK08125        314 RRTRVLILGVNGFIGNHLTERLLRDDNYEVYGLDIGSDAISR----FL--GHPRFHFVEGDISIHSEWIEYHIK------  381 (660)
T ss_pred             cCCEEEEECCCchHHHHHHHHHHhCCCcEEEEEeCCchhhhh----hc--CCCceEEEeccccCcHHHHHHHhc------
Confidence            5788999999999999999999986 7999999997643221    11  12357889999998654 333332      


Q ss_pred             CCccEEEEccccCCcccccccCChHHHHHHHHhhhHHHHHHHHHHhhhhhhcCCeEEEEcCccccccC------------
Q 044010          124 GRLDHLVNNAGISSVALFEDIVNITDFKQIMNINFWGSVYTTRFAVPHLRYTKGKIVVLSSAASWLTA------------  191 (248)
Q Consensus       124 g~id~vv~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~g~iV~isS~~~~~~~------------  191 (248)
                       ++|+|||.|+...+...     .++.+..+++|+.++.++++++...    +.++|++||...+...            
T Consensus       382 -~~D~ViHlAa~~~~~~~-----~~~~~~~~~~Nv~~t~~ll~a~~~~----~~~~V~~SS~~vyg~~~~~~~~E~~~~~  451 (660)
T PRK08125        382 -KCDVVLPLVAIATPIEY-----TRNPLRVFELDFEENLKIIRYCVKY----NKRIIFPSTSEVYGMCTDKYFDEDTSNL  451 (660)
T ss_pred             -CCCEEEECccccCchhh-----ccCHHHHHHhhHHHHHHHHHHHHhc----CCeEEEEcchhhcCCCCCCCcCcccccc
Confidence             69999999997654321     1233467889999999999987643    2489999997544310            


Q ss_pred             ---C---CCccchHHHHHHHHHHHHHHHHhCCCeEEEEEecCccccC
Q 044010          192 ---P---RMSFYNASKAALVLFFETLRVELGSDVGVTIVTPGFIESE  232 (248)
Q Consensus       192 ---~---~~~~Y~~sKaal~~l~~~la~~~~~~i~v~~v~pg~v~T~  232 (248)
                         +   +...|+.||.+.+.+++.++++++  +++..+.|+.+..|
T Consensus       452 ~~~p~~~p~s~Yg~sK~~~E~~~~~~~~~~g--~~~~ilR~~~vyGp  496 (660)
T PRK08125        452 IVGPINKQRWIYSVSKQLLDRVIWAYGEKEG--LRFTLFRPFNWMGP  496 (660)
T ss_pred             ccCCCCCCccchHHHHHHHHHHHHHHHHhcC--CceEEEEEceeeCC
Confidence               0   113699999999999999887764  67777777776654

>PLN02260 probable rhamnose biosynthetic enzyme

Probab=99.58  E-value=1.5e-13  Score=130.79  Aligned_cols=172  Identities=16%  Similarity=0.190  Sum_probs=122.8

Q ss_pred             CCCCCEEEEcCCCChHHHHHHHHHHHc--CCeEEEEeCCc--chHHHHHHHHHhhCCCcEEEEEccCCCHHHHHHHHHHH
Q 044010           44 DVSGKVVIITGASSGIGEHLAYEYARR--GACLALCARRE--KSLEEVADTAREIGSPDVITIRADVSKVDDCRSLVEET  119 (248)
Q Consensus        44 ~~~~k~~lVtGg~~gIG~aia~~l~~~--G~~V~l~~r~~--~~~~~~~~~l~~~~~~~v~~~~~D~~~~~~~~~~~~~~  119 (248)
                      ..+.|++|||||+|.||.+++++|+++  |++|+.++|..  ...+...   ......++.++.+|++|.+.+..++.. 
T Consensus         3 ~~~~~~VLVTGatGfIG~~lv~~Ll~~g~~~~V~~~d~~~~~~~~~~l~---~~~~~~~v~~~~~Dl~d~~~~~~~~~~-   78 (668)
T PLN02260          3 TYEPKNILITGAAGFIASHVANRLIRNYPDYKIVVLDKLDYCSNLKNLN---PSKSSPNFKFVKGDIASADLVNYLLIT-   78 (668)
T ss_pred             CCCCCEEEEECCCcHHHHHHHHHHHHhCCCCEEEEEeCCCccchhhhhh---hcccCCCeEEEECCCCChHHHHHHHhh-
Confidence            456789999999999999999999998  67899888753  1111111   111123688999999999887666532 


Q ss_pred             HhHcCCccEEEEccccCCcccccccCChHHHHHHHHhhhHHHHHHHHHHhhhhhhcCCeEEEEcCccccccC--------
Q 044010          120 MNHFGRLDHLVNNAGISSVALFEDIVNITDFKQIMNINFWGSVYTTRFAVPHLRYTKGKIVVLSSAASWLTA--------  191 (248)
Q Consensus       120 ~~~~g~id~vv~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~g~iV~isS~~~~~~~--------  191 (248)
                          .++|+|||+|+......     +.++..+.+++|+.++..+++++...  ....++|++||...+...        
T Consensus        79 ----~~~D~ViHlAa~~~~~~-----~~~~~~~~~~~Nv~gt~~ll~a~~~~--~~vkr~I~~SS~~vyg~~~~~~~~~~  147 (668)
T PLN02260         79 ----EGIDTIMHFAAQTHVDN-----SFGNSFEFTKNNIYGTHVLLEACKVT--GQIRRFIHVSTDEVYGETDEDADVGN  147 (668)
T ss_pred             ----cCCCEEEECCCccCchh-----hhhCHHHHHHHHHHHHHHHHHHHHhc--CCCcEEEEEcchHHhCCCccccccCc
Confidence                37999999999764321     12333567789999999998887532  112589999997654211        


Q ss_pred             ------CCCccchHHHHHHHHHHHHHHHHhCCCeEEEEEecCccccC
Q 044010          192 ------PRMSFYNASKAALVLFFETLRVELGSDVGVTIVTPGFIESE  232 (248)
Q Consensus       192 ------~~~~~Y~~sKaal~~l~~~la~~~~~~i~v~~v~pg~v~T~  232 (248)
                            .+...|+.+|.+.+.+++.++.+++  +++..+.|+.+..+
T Consensus       148 ~E~~~~~p~~~Y~~sK~~aE~~v~~~~~~~~--l~~vilR~~~VyGp  192 (668)
T PLN02260        148 HEASQLLPTNPYSATKAGAEMLVMAYGRSYG--LPVITTRGNNVYGP  192 (668)
T ss_pred             cccCCCCCCCCcHHHHHHHHHHHHHHHHHcC--CCEEEECcccccCc
Confidence                  1235799999999999998887763  66777778766554

>PRK11150 rfaD ADP-L-glycero-D-mannoheptose-6-epimerase; Provisional

Probab=99.57  E-value=4.8e-14  Score=121.86  Aligned_cols=159  Identities=17%  Similarity=0.176  Sum_probs=109.4

Q ss_pred             EEEcCCCChHHHHHHHHHHHcCCeEEEEeCCcchHHHHHHHHHhhCCCcEEEEEccCCCHHHHHHHHHHHHh--HcCCcc
Q 044010           50 VIITGASSGIGEHLAYEYARRGACLALCARREKSLEEVADTAREIGSPDVITIRADVSKVDDCRSLVEETMN--HFGRLD  127 (248)
Q Consensus        50 ~lVtGg~~gIG~aia~~l~~~G~~V~l~~r~~~~~~~~~~~l~~~~~~~v~~~~~D~~~~~~~~~~~~~~~~--~~g~id  127 (248)
                      +|||||+|.||.+++++|+++|++++++.|+....... .          ....+|++|..+.+++++++.+  .++++|
T Consensus         2 ilVtGa~GfiG~~l~~~L~~~g~~~v~~~~~~~~~~~~-~----------~~~~~~~~d~~~~~~~~~~~~~~~~~~~~d   70 (308)
T PRK11150          2 IIVTGGAGFIGSNIVKALNDKGITDILVVDNLKDGTKF-V----------NLVDLDIADYMDKEDFLAQIMAGDDFGDIE   70 (308)
T ss_pred             EEEecCCcHHHHHHHHHHHhCCCceEEEecCCCcchHH-H----------hhhhhhhhhhhhHHHHHHHHhcccccCCcc
Confidence            69999999999999999999999766665554332111 0          1234577777666666665542  345899


Q ss_pred             EEEEccccCCcccccccCChHHHHHHHHhhhHHHHHHHHHHhhhhhhcCCeEEEEcCccccccC-----------CCCcc
Q 044010          128 HLVNNAGISSVALFEDIVNITDFKQIMNINFWGSVYTTRFAVPHLRYTKGKIVVLSSAASWLTA-----------PRMSF  196 (248)
Q Consensus       128 ~vv~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~g~iV~isS~~~~~~~-----------~~~~~  196 (248)
                      +|||+||......    .+   .+..++.|+.++.++++.+..    .+.++|++||.+.+...           .+...
T Consensus        71 ~Vih~A~~~~~~~----~~---~~~~~~~n~~~t~~ll~~~~~----~~~~~i~~SS~~vyg~~~~~~~~E~~~~~p~~~  139 (308)
T PRK11150         71 AIFHEGACSSTTE----WD---GKYMMDNNYQYSKELLHYCLE----REIPFLYASSAATYGGRTDDFIEEREYEKPLNV  139 (308)
T ss_pred             EEEECceecCCcC----CC---hHHHHHHHHHHHHHHHHHHHH----cCCcEEEEcchHHhCcCCCCCCccCCCCCCCCH
Confidence            9999998644321    11   134688999999999998753    33479999997654321           12357


Q ss_pred             chHHHHHHHHHHHHHHHHhCCCeEEEEEecCccccC
Q 044010          197 YNASKAALVLFFETLRVELGSDVGVTIVTPGFIESE  232 (248)
Q Consensus       197 Y~~sKaal~~l~~~la~~~~~~i~v~~v~pg~v~T~  232 (248)
                      |+.||.+.+.+.+.++.+.  ++++..+.|+.+-.+
T Consensus       140 Y~~sK~~~E~~~~~~~~~~--~~~~~~lR~~~vyG~  173 (308)
T PRK11150        140 YGYSKFLFDEYVRQILPEA--NSQICGFRYFNVYGP  173 (308)
T ss_pred             HHHHHHHHHHHHHHHHHHc--CCCEEEEeeeeecCC
Confidence            9999999999988887664  356666666655543

>PRK11908 NAD-dependent epimerase/dehydratase family protein; Provisional

Probab=99.57  E-value=7.6e-14  Score=122.70  Aligned_cols=161  Identities=18%  Similarity=0.192  Sum_probs=113.8

Q ss_pred             CEEEEcCCCChHHHHHHHHHHHc-CCeEEEEeCCcchHHHHHHHHHhhCCCcEEEEEccCC-CHHHHHHHHHHHHhHcCC
Q 044010           48 KVVIITGASSGIGEHLAYEYARR-GACLALCARREKSLEEVADTAREIGSPDVITIRADVS-KVDDCRSLVEETMNHFGR  125 (248)
Q Consensus        48 k~~lVtGg~~gIG~aia~~l~~~-G~~V~l~~r~~~~~~~~~~~l~~~~~~~v~~~~~D~~-~~~~~~~~~~~~~~~~g~  125 (248)
                      +++|||||+|.||.+++++|+++ |++|+.++|+.++..    .+.  ...++.++.+|++ +.+.+.++++       +
T Consensus         2 ~~ilVtGatGfiGs~l~~~L~~~~~~~V~~~~r~~~~~~----~~~--~~~~~~~~~~Dl~~~~~~~~~~~~-------~   68 (347)
T PRK11908          2 KKVLILGVNGFIGHHLSKRILETTDWEVYGMDMQTDRLG----DLV--NHPRMHFFEGDITINKEWIEYHVK-------K   68 (347)
T ss_pred             cEEEEECCCcHHHHHHHHHHHhCCCCeEEEEeCcHHHHH----Hhc--cCCCeEEEeCCCCCCHHHHHHHHc-------C
Confidence            47999999999999999999986 699999998653221    111  1235888999998 6666655543       6


Q ss_pred             ccEEEEccccCCcccccccCChHHHHHHHHhhhHHHHHHHHHHhhhhhhcCCeEEEEcCccccccCC-------------
Q 044010          126 LDHLVNNAGISSVALFEDIVNITDFKQIMNINFWGSVYTTRFAVPHLRYTKGKIVVLSSAASWLTAP-------------  192 (248)
Q Consensus       126 id~vv~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~g~iV~isS~~~~~~~~-------------  192 (248)
                      +|+|||.|+...+...     .++.+..+++|+.+..++++.+..    .+.++|++||...+...+             
T Consensus        69 ~d~ViH~aa~~~~~~~-----~~~p~~~~~~n~~~~~~ll~aa~~----~~~~~v~~SS~~vyg~~~~~~~~ee~~~~~~  139 (347)
T PRK11908         69 CDVILPLVAIATPATY-----VKQPLRVFELDFEANLPIVRSAVK----YGKHLVFPSTSEVYGMCPDEEFDPEASPLVY  139 (347)
T ss_pred             CCEEEECcccCChHHh-----hcCcHHHHHHHHHHHHHHHHHHHh----cCCeEEEEecceeeccCCCcCcCcccccccc
Confidence            9999999997544321     133456788999999998888753    235899999975442110             


Q ss_pred             -----CCccchHHHHHHHHHHHHHHHHhCCCeEEEEEecCccccC
Q 044010          193 -----RMSFYNASKAALVLFFETLRVELGSDVGVTIVTPGFIESE  232 (248)
Q Consensus       193 -----~~~~Y~~sKaal~~l~~~la~~~~~~i~v~~v~pg~v~T~  232 (248)
                           +...|+.||.+.+.+.+.++.+++  +.+..+.|+.+..+
T Consensus       140 ~~~~~p~~~Y~~sK~~~e~~~~~~~~~~~--~~~~ilR~~~v~Gp  182 (347)
T PRK11908        140 GPINKPRWIYACSKQLMDRVIWAYGMEEG--LNFTLFRPFNWIGP  182 (347)
T ss_pred             CcCCCccchHHHHHHHHHHHHHHHHHHcC--CCeEEEeeeeeeCC
Confidence                 112699999999999999887654  44555556554433

>TIGR02197 heptose_epim ADP-L-glycero-D-manno-heptose-6-epimerase

Probab=99.56  E-value=1.5e-13  Score=118.78  Aligned_cols=161  Identities=17%  Similarity=0.157  Sum_probs=111.0

Q ss_pred             EEEcCCCChHHHHHHHHHHHcCC-eEEEEeCCcchHHHHHHHHHhhCCCcEEEEEccCCCHHHHHHHHHHHHhHcCCccE
Q 044010           50 VIITGASSGIGEHLAYEYARRGA-CLALCARREKSLEEVADTAREIGSPDVITIRADVSKVDDCRSLVEETMNHFGRLDH  128 (248)
Q Consensus        50 ~lVtGg~~gIG~aia~~l~~~G~-~V~l~~r~~~~~~~~~~~l~~~~~~~v~~~~~D~~~~~~~~~~~~~~~~~~g~id~  128 (248)
                      +|||||+|.||.+++++|.++|+ +|++++|..... .. .++   .   ...+..|+.+.+.++.+.+.   .++++|+
T Consensus         1 ilItGatG~iG~~l~~~L~~~g~~~v~~~~~~~~~~-~~-~~~---~---~~~~~~d~~~~~~~~~~~~~---~~~~~D~   69 (314)
T TIGR02197         1 IIVTGGAGFIGSNLVKALNERGITDILVVDNLRDGH-KF-LNL---A---DLVIADYIDKEDFLDRLEKG---AFGKIEA   69 (314)
T ss_pred             CEEeCCcchhhHHHHHHHHHcCCceEEEEecCCCch-hh-hhh---h---heeeeccCcchhHHHHHHhh---ccCCCCE
Confidence            58999999999999999999998 788887754321 11 111   1   13466788887776665542   3458999


Q ss_pred             EEEccccCCcccccccCChHHHHHHHHhhhHHHHHHHHHHhhhhhhcCCeEEEEcCcccccc-----------CCCCccc
Q 044010          129 LVNNAGISSVALFEDIVNITDFKQIMNINFWGSVYTTRFAVPHLRYTKGKIVVLSSAASWLT-----------APRMSFY  197 (248)
Q Consensus       129 vv~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~g~iV~isS~~~~~~-----------~~~~~~Y  197 (248)
                      +||+|+....       +.++.+..+++|+.++.++++.+..    .+.++|++||.+.+..           ..+...|
T Consensus        70 vvh~A~~~~~-------~~~~~~~~~~~n~~~~~~ll~~~~~----~~~~~v~~SS~~vy~~~~~~~~e~~~~~~p~~~Y  138 (314)
T TIGR02197        70 IFHQGACSDT-------TETDGEYMMENNYQYSKRLLDWCAE----KGIPFIYASSAATYGDGEAGFREGRELERPLNVY  138 (314)
T ss_pred             EEECccccCc-------cccchHHHHHHHHHHHHHHHHHHHH----hCCcEEEEccHHhcCCCCCCcccccCcCCCCCHH
Confidence            9999996432       1234567889999999999988753    2347999999765431           1135679


Q ss_pred             hHHHHHHHHHHHHHHHHhCCCeEEEEEecCccccC
Q 044010          198 NASKAALVLFFETLRVELGSDVGVTIVTPGFIESE  232 (248)
Q Consensus       198 ~~sKaal~~l~~~la~~~~~~i~v~~v~pg~v~T~  232 (248)
                      +.||.+.+.+++....+...++++..+.|+.+..+
T Consensus       139 ~~sK~~~e~~~~~~~~~~~~~~~~~~lR~~~vyG~  173 (314)
T TIGR02197       139 GYSKFLFDQYVRRRVLPEALSAQVVGLRYFNVYGP  173 (314)
T ss_pred             HHHHHHHHHHHHHHhHhhccCCceEEEEEeeccCC
Confidence            99999999998864433322355555666555443

This family consists of examples of ADP-L-glycero-D-mannoheptose-6-epimerase, an enzyme involved in biosynthesis of the inner core of lipopolysaccharide (LPS) for Gram-negative bacteria. This enzyme is homologous to UDP-glucose 4-epimerase (TIGR01179) and belongs to the NAD dependent epimerase/dehydratase family (pfam01370).

>PLN02657 3,8-divinyl protochlorophyllide a 8-vinyl reductase

Probab=99.56  E-value=1.8e-13  Score=122.31  Aligned_cols=164  Identities=18%  Similarity=0.213  Sum_probs=116.9

Q ss_pred             CCCCCEEEEcCCCChHHHHHHHHHHHcCCeEEEEeCCcchHHH--HHHHHHhhCCCcEEEEEccCCCHHHHHHHHHHHHh
Q 044010           44 DVSGKVVIITGASSGIGEHLAYEYARRGACLALCARREKSLEE--VADTAREIGSPDVITIRADVSKVDDCRSLVEETMN  121 (248)
Q Consensus        44 ~~~~k~~lVtGg~~gIG~aia~~l~~~G~~V~l~~r~~~~~~~--~~~~l~~~~~~~v~~~~~D~~~~~~~~~~~~~~~~  121 (248)
                      ..++++++||||+|+||.+++++|+++|++|++++|+..+.+.  ..++..... .++.++.+|++|.+++.++++..  
T Consensus        57 ~~~~~kVLVtGatG~IG~~l~~~Ll~~G~~V~~l~R~~~~~~~~~~~~~~~~~~-~~v~~v~~Dl~d~~~l~~~~~~~--  133 (390)
T PLN02657         57 EPKDVTVLVVGATGYIGKFVVRELVRRGYNVVAVAREKSGIRGKNGKEDTKKEL-PGAEVVFGDVTDADSLRKVLFSE--  133 (390)
T ss_pred             CCCCCEEEEECCCcHHHHHHHHHHHHCCCEEEEEEechhhccccchhhHHhhhc-CCceEEEeeCCCHHHHHHHHHHh--
Confidence            4568899999999999999999999999999999998754321  111122122 26789999999999999888753  


Q ss_pred             HcCCccEEEEccccCCcccccccCChHHHHHHHHhhhHHHHHHHHHHhhhhhhcCCeEEEEcCccccccCCCCccchHHH
Q 044010          122 HFGRLDHLVNNAGISSVALFEDIVNITDFKQIMNINFWGSVYTTRFAVPHLRYTKGKIVVLSSAASWLTAPRMSFYNASK  201 (248)
Q Consensus       122 ~~g~id~vv~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~g~iV~isS~~~~~~~~~~~~Y~~sK  201 (248)
                       .+++|+|||++|.....      .    .+.+++|+.+..++++++...   ..+++|++||.+...+   ...|..+|
T Consensus       134 -~~~~D~Vi~~aa~~~~~------~----~~~~~vn~~~~~~ll~aa~~~---gv~r~V~iSS~~v~~p---~~~~~~sK  196 (390)
T PLN02657        134 -GDPVDVVVSCLASRTGG------V----KDSWKIDYQATKNSLDAGREV---GAKHFVLLSAICVQKP---LLEFQRAK  196 (390)
T ss_pred             -CCCCcEEEECCccCCCC------C----ccchhhHHHHHHHHHHHHHHc---CCCEEEEEeeccccCc---chHHHHHH
Confidence             12699999998853211      1    123456777887777776421   2368999999865433   45688899


Q ss_pred             HHHHHHHHHHHHHhCCCeEEEEEecCcccc
Q 044010          202 AALVLFFETLRVELGSDVGVTIVTPGFIES  231 (248)
Q Consensus       202 aal~~l~~~la~~~~~~i~v~~v~pg~v~T  231 (248)
                      ...+...+.    ...+++...+.|+.+..
T Consensus       197 ~~~E~~l~~----~~~gl~~tIlRp~~~~~  222 (390)
T PLN02657        197 LKFEAELQA----LDSDFTYSIVRPTAFFK  222 (390)
T ss_pred             HHHHHHHHh----ccCCCCEEEEccHHHhc
Confidence            988887654    22357888888877653

>PLN02206 UDP-glucuronate decarboxylase

Probab=99.55  E-value=2e-13  Score=123.74  Aligned_cols=161  Identities=17%  Similarity=0.150  Sum_probs=113.3

Q ss_pred             CCCCEEEEcCCCChHHHHHHHHHHHcCCeEEEEeCCcchHHHHHHHHHhhCCCcEEEEEccCCCHHHHHHHHHHHHhHcC
Q 044010           45 VSGKVVIITGASSGIGEHLAYEYARRGACLALCARREKSLEEVADTAREIGSPDVITIRADVSKVDDCRSLVEETMNHFG  124 (248)
Q Consensus        45 ~~~k~~lVtGg~~gIG~aia~~l~~~G~~V~l~~r~~~~~~~~~~~l~~~~~~~v~~~~~D~~~~~~~~~~~~~~~~~~g  124 (248)
                      -+++++|||||+|.||.+++++|+++|++|++++|......+....  .....++.++..|+.+..     +       .
T Consensus       117 ~~~~kILVTGatGfIGs~Lv~~Ll~~G~~V~~ld~~~~~~~~~~~~--~~~~~~~~~i~~D~~~~~-----l-------~  182 (442)
T PLN02206        117 RKGLRVVVTGGAGFVGSHLVDRLMARGDSVIVVDNFFTGRKENVMH--HFSNPNFELIRHDVVEPI-----L-------L  182 (442)
T ss_pred             cCCCEEEEECcccHHHHHHHHHHHHCcCEEEEEeCCCccchhhhhh--hccCCceEEEECCccChh-----h-------c
Confidence            3678999999999999999999999999999988754322211111  112235778889987652     1       2


Q ss_pred             CccEEEEccccCCcccccccCChHHHHHHHHhhhHHHHHHHHHHhhhhhhcCCeEEEEcCccccccC-------------
Q 044010          125 RLDHLVNNAGISSVALFEDIVNITDFKQIMNINFWGSVYTTRFAVPHLRYTKGKIVVLSSAASWLTA-------------  191 (248)
Q Consensus       125 ~id~vv~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~g~iV~isS~~~~~~~-------------  191 (248)
                      ++|+|||.|+...+...     .++....+++|+.++.++++++...    +.++|++||...+...             
T Consensus       183 ~~D~ViHlAa~~~~~~~-----~~~p~~~~~~Nv~gt~nLleaa~~~----g~r~V~~SS~~VYg~~~~~p~~E~~~~~~  253 (442)
T PLN02206        183 EVDQIYHLACPASPVHY-----KFNPVKTIKTNVVGTLNMLGLAKRV----GARFLLTSTSEVYGDPLQHPQVETYWGNV  253 (442)
T ss_pred             CCCEEEEeeeecchhhh-----hcCHHHHHHHHHHHHHHHHHHHHHh----CCEEEEECChHHhCCCCCCCCCccccccC
Confidence            58999999987653321     1234578899999999999987532    3489999998755311             


Q ss_pred             ---CCCccchHHHHHHHHHHHHHHHHhCCCeEEEEEecCccc
Q 044010          192 ---PRMSFYNASKAALVLFFETLRVELGSDVGVTIVTPGFIE  230 (248)
Q Consensus       192 ---~~~~~Y~~sKaal~~l~~~la~~~~~~i~v~~v~pg~v~  230 (248)
                         .....|+.+|.+.+.+++.+.++++  +++..+.|+.+.
T Consensus       254 ~P~~~~s~Y~~SK~~aE~~~~~y~~~~g--~~~~ilR~~~vy  293 (442)
T PLN02206        254 NPIGVRSCYDEGKRTAETLTMDYHRGAN--VEVRIARIFNTY  293 (442)
T ss_pred             CCCCccchHHHHHHHHHHHHHHHHHHhC--CCeEEEEecccc
Confidence               1135699999999999988877654  455555554443

>TIGR01214 rmlD dTDP-4-dehydrorhamnose reductase

Probab=99.54  E-value=2.5e-13  Score=116.04  Aligned_cols=143  Identities=20%  Similarity=0.248  Sum_probs=108.2

Q ss_pred             EEEEcCCCChHHHHHHHHHHHcCCeEEEEeCCcchHHHHHHHHHhhCCCcEEEEEccCCCHHHHHHHHHHHHhHcCCccE
Q 044010           49 VVIITGASSGIGEHLAYEYARRGACLALCARREKSLEEVADTAREIGSPDVITIRADVSKVDDCRSLVEETMNHFGRLDH  128 (248)
Q Consensus        49 ~~lVtGg~~gIG~aia~~l~~~G~~V~l~~r~~~~~~~~~~~l~~~~~~~v~~~~~D~~~~~~~~~~~~~~~~~~g~id~  128 (248)
                      +++||||+|.||.+++++|+++|++|++++|.                      .+|+.+.++++++++..     ++|+
T Consensus         1 kilv~G~tG~iG~~l~~~l~~~g~~v~~~~r~----------------------~~d~~~~~~~~~~~~~~-----~~d~   53 (287)
T TIGR01214         1 RILITGANGQLGRELVQQLSPEGRVVVALTSS----------------------QLDLTDPEALERLLRAI-----RPDA   53 (287)
T ss_pred             CEEEEcCCCHHHHHHHHHHHhcCCEEEEeCCc----------------------ccCCCCHHHHHHHHHhC-----CCCE
Confidence            37999999999999999999999999999884                      36999999998887653     6899


Q ss_pred             EEEccccCCcccccccCChHHHHHHHHhhhHHHHHHHHHHhhhhhhcCCeEEEEcCccccccC-----------CCCccc
Q 044010          129 LVNNAGISSVALFEDIVNITDFKQIMNINFWGSVYTTRFAVPHLRYTKGKIVVLSSAASWLTA-----------PRMSFY  197 (248)
Q Consensus       129 vv~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~g~iV~isS~~~~~~~-----------~~~~~Y  197 (248)
                      +||+||......     ........+++|+.++.++++.+..    .+.++|++||...+.+.           .+...|
T Consensus        54 vi~~a~~~~~~~-----~~~~~~~~~~~n~~~~~~l~~~~~~----~~~~~v~~Ss~~vy~~~~~~~~~E~~~~~~~~~Y  124 (287)
T TIGR01214        54 VVNTAAYTDVDG-----AESDPEKAFAVNALAPQNLARAAAR----HGARLVHISTDYVFDGEGKRPYREDDATNPLNVY  124 (287)
T ss_pred             EEECCccccccc-----cccCHHHHHHHHHHHHHHHHHHHHH----cCCeEEEEeeeeeecCCCCCCCCCCCCCCCcchh
Confidence            999999754221     1133456788999999999988643    33489999986544221           124579


Q ss_pred             hHHHHHHHHHHHHHHHHhCCCeEEEEEecCccccCc
Q 044010          198 NASKAALVLFFETLRVELGSDVGVTIVTPGFIESEL  233 (248)
Q Consensus       198 ~~sKaal~~l~~~la~~~~~~i~v~~v~pg~v~T~~  233 (248)
                      +.+|.+.+.+++.+    +  .++..+.|+.+..+.
T Consensus       125 ~~~K~~~E~~~~~~----~--~~~~ilR~~~v~G~~  154 (287)
T TIGR01214       125 GQSKLAGEQAIRAA----G--PNALIVRTSWLYGGG  154 (287)
T ss_pred             hHHHHHHHHHHHHh----C--CCeEEEEeeecccCC
Confidence            99999999888765    2  356677777775543

This enzyme catalyzes the last of 4 steps in making dTDP-rhamnose, a precursor of LPS core antigen, O-antigen, etc.

>COG0451 WcaG Nucleoside-diphosphate-sugar epimerases [Cell envelope biogenesis, outer membrane / Carbohydrate transport and metabolism]

Probab=99.52  E-value=4.9e-13  Score=115.28  Aligned_cols=162  Identities=20%  Similarity=0.191  Sum_probs=119.5

Q ss_pred             EEEcCCCChHHHHHHHHHHHcCCeEEEEeCCcchHHHHHHHHHhhCCCcEEEEEccCCCHHHHHHHHHHHHhHcCCc-cE
Q 044010           50 VIITGASSGIGEHLAYEYARRGACLALCARREKSLEEVADTAREIGSPDVITIRADVSKVDDCRSLVEETMNHFGRL-DH  128 (248)
Q Consensus        50 ~lVtGg~~gIG~aia~~l~~~G~~V~l~~r~~~~~~~~~~~l~~~~~~~v~~~~~D~~~~~~~~~~~~~~~~~~g~i-d~  128 (248)
                      +|||||+|.||.+++++|+++|++|..++|...+.....        ..+.++.+|+++.+...++.+       .. |.
T Consensus         3 ILVtG~tGfiG~~l~~~L~~~g~~V~~~~r~~~~~~~~~--------~~~~~~~~d~~~~~~~~~~~~-------~~~d~   67 (314)
T COG0451           3 ILVTGGAGFIGSHLVERLLAAGHDVRGLDRLRDGLDPLL--------SGVEFVVLDLTDRDLVDELAK-------GVPDA   67 (314)
T ss_pred             EEEEcCcccHHHHHHHHHHhCCCeEEEEeCCCccccccc--------cccceeeecccchHHHHHHHh-------cCCCE
Confidence            899999999999999999999999999999775433322        257789999999955555544       23 99


Q ss_pred             EEEccccCCcccccccCChHHHHHHHHhhhHHHHHHHHHHhhhhhhcCCeEEEEcCccccccC-----------CCCc--
Q 044010          129 LVNNAGISSVALFEDIVNITDFKQIMNINFWGSVYTTRFAVPHLRYTKGKIVVLSSAASWLTA-----------PRMS--  195 (248)
Q Consensus       129 vv~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~g~iV~isS~~~~~~~-----------~~~~--  195 (248)
                      +||+|+.........   . +....+.+|+.++.++++++..   ....++|+.||.+.+.+.           +..+  
T Consensus        68 vih~aa~~~~~~~~~---~-~~~~~~~~nv~gt~~ll~aa~~---~~~~~~v~~ss~~~~~~~~~~~~~~E~~~~~~p~~  140 (314)
T COG0451          68 VIHLAAQSSVPDSNA---S-DPAEFLDVNVDGTLNLLEAARA---AGVKRFVFASSVSVVYGDPPPLPIDEDLGPPRPLN  140 (314)
T ss_pred             EEEccccCchhhhhh---h-CHHHHHHHHHHHHHHHHHHHHH---cCCCeEEEeCCCceECCCCCCCCcccccCCCCCCC
Confidence            999999876442111   1 3556889999999999999875   234589996665544422           1112  


Q ss_pred             cchHHHHHHHHHHHHHHHHhCCCeEEEEEecCccccCccc
Q 044010          196 FYNASKAALVLFFETLRVELGSDVGVTIVTPGFIESELTQ  235 (248)
Q Consensus       196 ~Y~~sKaal~~l~~~la~~~~~~i~v~~v~pg~v~T~~~~  235 (248)
                      .|+.+|...+.+++..+...  ++.+..+.|+.+--+...
T Consensus       141 ~Yg~sK~~~E~~~~~~~~~~--~~~~~ilR~~~vyGp~~~  178 (314)
T COG0451         141 PYGVSKLAAEQLLRAYARLY--GLPVVILRPFNVYGPGDK  178 (314)
T ss_pred             HHHHHHHHHHHHHHHHHHHh--CCCeEEEeeeeeeCCCCC
Confidence            49999999999999998833  477777787766554433

>PLN02166 dTDP-glucose 4,6-dehydratase

Probab=99.52  E-value=6.7e-13  Score=120.14  Aligned_cols=161  Identities=18%  Similarity=0.165  Sum_probs=112.8

Q ss_pred             CCCEEEEcCCCChHHHHHHHHHHHcCCeEEEEeCCcchHHHHHHHHHhhCCCcEEEEEccCCCHHHHHHHHHHHHhHcCC
Q 044010           46 SGKVVIITGASSGIGEHLAYEYARRGACLALCARREKSLEEVADTAREIGSPDVITIRADVSKVDDCRSLVEETMNHFGR  125 (248)
Q Consensus        46 ~~k~~lVtGg~~gIG~aia~~l~~~G~~V~l~~r~~~~~~~~~~~l~~~~~~~v~~~~~D~~~~~~~~~~~~~~~~~~g~  125 (248)
                      +.++++||||+|.||.+++++|+++|++|++++|...........+.  ...++.++..|+.+..     +       .+
T Consensus       119 ~~mkILVTGatGFIGs~Lv~~Ll~~G~~V~~ldr~~~~~~~~~~~~~--~~~~~~~~~~Di~~~~-----~-------~~  184 (436)
T PLN02166        119 KRLRIVVTGGAGFVGSHLVDKLIGRGDEVIVIDNFFTGRKENLVHLF--GNPRFELIRHDVVEPI-----L-------LE  184 (436)
T ss_pred             CCCEEEEECCccHHHHHHHHHHHHCCCEEEEEeCCCCccHhHhhhhc--cCCceEEEECcccccc-----c-------cC
Confidence            34689999999999999999999999999999986432222111111  1235778888987642     1       26


Q ss_pred             ccEEEEccccCCcccccccCChHHHHHHHHhhhHHHHHHHHHHhhhhhhcCCeEEEEcCccccccC--------------
Q 044010          126 LDHLVNNAGISSVALFEDIVNITDFKQIMNINFWGSVYTTRFAVPHLRYTKGKIVVLSSAASWLTA--------------  191 (248)
Q Consensus       126 id~vv~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~g~iV~isS~~~~~~~--------------  191 (248)
                      +|+|||.|+...+...     ..+..+.+++|+.++.++++.+...    +.++|++||...+...              
T Consensus       185 ~D~ViHlAa~~~~~~~-----~~~p~~~~~~Nv~gT~nLleaa~~~----g~r~V~~SS~~VYg~~~~~p~~E~~~~~~~  255 (436)
T PLN02166        185 VDQIYHLACPASPVHY-----KYNPVKTIKTNVMGTLNMLGLAKRV----GARFLLTSTSEVYGDPLEHPQKETYWGNVN  255 (436)
T ss_pred             CCEEEECceeccchhh-----ccCHHHHHHHHHHHHHHHHHHHHHh----CCEEEEECcHHHhCCCCCCCCCccccccCC
Confidence            9999999987543221     1234578889999999999887632    3489999997654311              


Q ss_pred             C--CCccchHHHHHHHHHHHHHHHHhCCCeEEEEEecCcccc
Q 044010          192 P--RMSFYNASKAALVLFFETLRVELGSDVGVTIVTPGFIES  231 (248)
Q Consensus       192 ~--~~~~Y~~sKaal~~l~~~la~~~~~~i~v~~v~pg~v~T  231 (248)
                      |  ....|+.+|.+.+.+++.+++.++  +++..+.|+.+..
T Consensus       256 p~~p~s~Yg~SK~~aE~~~~~y~~~~~--l~~~ilR~~~vYG  295 (436)
T PLN02166        256 PIGERSCYDEGKRTAETLAMDYHRGAG--VEVRIARIFNTYG  295 (436)
T ss_pred             CCCCCCchHHHHHHHHHHHHHHHHHhC--CCeEEEEEccccC
Confidence            1  134699999999999999877754  4555555554443

>PRK09987 dTDP-4-dehydrorhamnose reductase; Provisional

Probab=99.50  E-value=5.6e-13  Score=115.01  Aligned_cols=132  Identities=17%  Similarity=0.112  Sum_probs=99.9

Q ss_pred             EEEEcCCCChHHHHHHHHHHHcCCeEEEEeCCcchHHHHHHHHHhhCCCcEEEEEccCCCHHHHHHHHHHHHhHcCCccE
Q 044010           49 VVIITGASSGIGEHLAYEYARRGACLALCARREKSLEEVADTAREIGSPDVITIRADVSKVDDCRSLVEETMNHFGRLDH  128 (248)
Q Consensus        49 ~~lVtGg~~gIG~aia~~l~~~G~~V~l~~r~~~~~~~~~~~l~~~~~~~v~~~~~D~~~~~~~~~~~~~~~~~~g~id~  128 (248)
                      ++|||||+|.||.+++++|+++| +|+.++|...                  .+..|++|.+++.++++..     ++|+
T Consensus         2 ~iLVtG~~GfiGs~l~~~L~~~g-~V~~~~~~~~------------------~~~~Dl~d~~~~~~~~~~~-----~~D~   57 (299)
T PRK09987          2 NILLFGKTGQVGWELQRALAPLG-NLIALDVHST------------------DYCGDFSNPEGVAETVRKI-----RPDV   57 (299)
T ss_pred             eEEEECCCCHHHHHHHHHhhccC-CEEEeccccc------------------cccCCCCCHHHHHHHHHhc-----CCCE
Confidence            69999999999999999999999 7888877521                  2357999999998888753     6999


Q ss_pred             EEEccccCCcccccccCChHHHHHHHHhhhHHHHHHHHHHhhhhhhcCCeEEEEcCccccccC-----------CCCccc
Q 044010          129 LVNNAGISSVALFEDIVNITDFKQIMNINFWGSVYTTRFAVPHLRYTKGKIVVLSSAASWLTA-----------PRMSFY  197 (248)
Q Consensus       129 vv~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~g~iV~isS~~~~~~~-----------~~~~~Y  197 (248)
                      |||+|+.......     .++.+..+.+|+.++.++++++..    .+.++|++||...+.+.           .+...|
T Consensus        58 Vih~Aa~~~~~~~-----~~~~~~~~~~N~~~~~~l~~aa~~----~g~~~v~~Ss~~Vy~~~~~~p~~E~~~~~P~~~Y  128 (299)
T PRK09987         58 IVNAAAHTAVDKA-----ESEPEFAQLLNATSVEAIAKAANE----VGAWVVHYSTDYVFPGTGDIPWQETDATAPLNVY  128 (299)
T ss_pred             EEECCccCCcchh-----hcCHHHHHHHHHHHHHHHHHHHHH----cCCeEEEEccceEECCCCCCCcCCCCCCCCCCHH
Confidence            9999997654321     123456678899999999988753    23489999986544211           123479


Q ss_pred             hHHHHHHHHHHHHHHH
Q 044010          198 NASKAALVLFFETLRV  213 (248)
Q Consensus       198 ~~sKaal~~l~~~la~  213 (248)
                      +.+|.+.+.+++....
T Consensus       129 g~sK~~~E~~~~~~~~  144 (299)
T PRK09987        129 GETKLAGEKALQEHCA  144 (299)
T ss_pred             HHHHHHHHHHHHHhCC
Confidence            9999999998876543

>PLN02725 GDP-4-keto-6-deoxymannose-3,5-epimerase-4-reductase

Probab=99.48  E-value=9.4e-13  Score=113.35  Aligned_cols=148  Identities=14%  Similarity=0.135  Sum_probs=108.7

Q ss_pred             EEcCCCChHHHHHHHHHHHcCCeEEEEeCCcchHHHHHHHHHhhCCCcEEEEEccCCCHHHHHHHHHHHHhHcCCccEEE
Q 044010           51 IITGASSGIGEHLAYEYARRGACLALCARREKSLEEVADTAREIGSPDVITIRADVSKVDDCRSLVEETMNHFGRLDHLV  130 (248)
Q Consensus        51 lVtGg~~gIG~aia~~l~~~G~~V~l~~r~~~~~~~~~~~l~~~~~~~v~~~~~D~~~~~~~~~~~~~~~~~~g~id~vv  130 (248)
                      |||||+|.||.++++.|+++|++|+++.+.                     ..+|+++.++++++++..     ++|+||
T Consensus         1 lItGa~GfiG~~l~~~L~~~g~~v~~~~~~---------------------~~~Dl~~~~~l~~~~~~~-----~~d~Vi   54 (306)
T PLN02725          1 FVAGHRGLVGSAIVRKLEALGFTNLVLRTH---------------------KELDLTRQADVEAFFAKE-----KPTYVI   54 (306)
T ss_pred             CcccCCCcccHHHHHHHHhCCCcEEEeecc---------------------ccCCCCCHHHHHHHHhcc-----CCCEEE
Confidence            699999999999999999999987765432                     137999999988887752     689999


Q ss_pred             EccccCCcccccccCChHHHHHHHHhhhHHHHHHHHHHhhhhhhcCCeEEEEcCccccccC-------------C--C-C
Q 044010          131 NNAGISSVALFEDIVNITDFKQIMNINFWGSVYTTRFAVPHLRYTKGKIVVLSSAASWLTA-------------P--R-M  194 (248)
Q Consensus       131 ~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~g~iV~isS~~~~~~~-------------~--~-~  194 (248)
                      |+|+.......    ..++....+++|+.++.++++.+...   ...++|++||...+.+.             +  + .
T Consensus        55 h~A~~~~~~~~----~~~~~~~~~~~n~~~~~~ll~~~~~~---~~~~~i~~SS~~vyg~~~~~~~~E~~~~~~~~~p~~  127 (306)
T PLN02725         55 LAAAKVGGIHA----NMTYPADFIRENLQIQTNVIDAAYRH---GVKKLLFLGSSCIYPKFAPQPIPETALLTGPPEPTN  127 (306)
T ss_pred             Eeeeeecccch----hhhCcHHHHHHHhHHHHHHHHHHHHc---CCCeEEEeCceeecCCCCCCCCCHHHhccCCCCCCc
Confidence            99997532110    11223456778999999999887632   23589999997643311             1  1 1


Q ss_pred             ccchHHHHHHHHHHHHHHHHhCCCeEEEEEecCccccCc
Q 044010          195 SFYNASKAALVLFFETLRVELGSDVGVTIVTPGFIESEL  233 (248)
Q Consensus       195 ~~Y~~sKaal~~l~~~la~~~~~~i~v~~v~pg~v~T~~  233 (248)
                      ..|+.||.+.+.+.+.+.+++  ++++..+.|+.+..+-
T Consensus       128 ~~Y~~sK~~~e~~~~~~~~~~--~~~~~~~R~~~vyG~~  164 (306)
T PLN02725        128 EWYAIAKIAGIKMCQAYRIQY--GWDAISGMPTNLYGPH  164 (306)
T ss_pred             chHHHHHHHHHHHHHHHHHHh--CCCEEEEEecceeCCC
Confidence            249999999999998887776  3778888888776653

>KOG4022 consensus Dihydropteridine reductase DHPR/QDPR [Amino acid transport and metabolism]

Probab=99.41  E-value=3.6e-11  Score=92.31  Aligned_cols=189  Identities=15%  Similarity=0.170  Sum_probs=126.4

Q ss_pred             CCCEEEEcCCCChHHHHHHHHHHHcCCeEEEEeCCcchHHHHHHHHHhhCCCcEEEEEccCCCHHHHHHHHHHHHhHcC-
Q 044010           46 SGKVVIITGASSGIGEHLAYEYARRGACLALCARREKSLEEVADTAREIGSPDVITIRADVSKVDDCRSLVEETMNHFG-  124 (248)
Q Consensus        46 ~~k~~lVtGg~~gIG~aia~~l~~~G~~V~l~~r~~~~~~~~~~~l~~~~~~~v~~~~~D~~~~~~~~~~~~~~~~~~g-  124 (248)
                      +-++++|-||-|.+|.++++.|-+++|-|.-++-.+.+..           +.-..+..|-+=.++-+.+.+++-+.++ 
T Consensus         2 sagrVivYGGkGALGSacv~~FkannywV~siDl~eNe~A-----------d~sI~V~~~~swtEQe~~v~~~vg~sL~g   70 (236)
T KOG4022|consen    2 SAGRVIVYGGKGALGSACVEFFKANNYWVLSIDLSENEQA-----------DSSILVDGNKSWTEQEQSVLEQVGSSLQG   70 (236)
T ss_pred             CCceEEEEcCcchHhHHHHHHHHhcCeEEEEEeecccccc-----------cceEEecCCcchhHHHHHHHHHHHHhhcc
Confidence            4568999999999999999999999998877766543211           1223444454445677777777766543 


Q ss_pred             -CccEEEEccccCCcccccccCChHHHHHHHHhhhHHHHHHHHHHhhhhhhcCCeEEEEcCccccccCCCCccchHHHHH
Q 044010          125 -RLDHLVNNAGISSVALFEDIVNITDFKQIMNINFWGSVYTTRFAVPHLRYTKGKIVVLSSAASWLTAPRMSFYNASKAA  203 (248)
Q Consensus       125 -~id~vv~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~g~iV~isS~~~~~~~~~~~~Y~~sKaa  203 (248)
                       ++|.+++-||.-...+-....-....+-++...+...-.-.+.+-.+++ .+|-+-..+.-++..+.|++-.|+++|+|
T Consensus        71 ekvDav~CVAGGWAGGnAksKdl~KNaDLMwKQSvwtSaIsa~lAt~HLK-~GGLL~LtGAkaAl~gTPgMIGYGMAKaA  149 (236)
T KOG4022|consen   71 EKVDAVFCVAGGWAGGNAKSKDLVKNADLMWKQSVWTSAISAKLATTHLK-PGGLLQLTGAKAALGGTPGMIGYGMAKAA  149 (236)
T ss_pred             cccceEEEeeccccCCCcchhhhhhchhhHHHHHHHHHHHHHHHHHhccC-CCceeeecccccccCCCCcccchhHHHHH
Confidence             7999999998543221100000111222333333333333333334443 44555555666677899999999999999


Q ss_pred             HHHHHHHHHHHhC--C-CeEEEEEecCccccCccccccccccccCC
Q 044010          204 LVLFFETLRVELG--S-DVGVTIVTPGFIESELTQGKFLTGRRQNS  246 (248)
Q Consensus       204 l~~l~~~la~~~~--~-~i~v~~v~pg~v~T~~~~~~~~~~~~~~~  246 (248)
                      +.+|+++|+.+-.  | +--+.+|-|=..+|||+++++++.+-..|
T Consensus       150 VHqLt~SLaak~SGlP~gsaa~~ilPVTLDTPMNRKwMP~ADfssW  195 (236)
T KOG4022|consen  150 VHQLTSSLAAKDSGLPDGSAALTILPVTLDTPMNRKWMPNADFSSW  195 (236)
T ss_pred             HHHHHHHhcccccCCCCCceeEEEeeeeccCccccccCCCCcccCc
Confidence            9999999998864  3 47788999999999999999988765443

>PF07993 NAD_binding_4: Male sterility protein; InterPro: IPR013120 This family represents the C-terminal NAD-binding region of the male sterility protein from Arabidopsis and Drosophila

Probab=99.41  E-value=4.8e-12  Score=106.40  Aligned_cols=169  Identities=19%  Similarity=0.212  Sum_probs=100.7

Q ss_pred             EcCCCChHHHHHHHHHHHcCC--eEEEEeCCcchHHHHHHHH----Hhh---------CCCcEEEEEccCCCHH-HH-HH
Q 044010           52 ITGASSGIGEHLAYEYARRGA--CLALCARREKSLEEVADTA----REI---------GSPDVITIRADVSKVD-DC-RS  114 (248)
Q Consensus        52 VtGg~~gIG~aia~~l~~~G~--~V~l~~r~~~~~~~~~~~l----~~~---------~~~~v~~~~~D~~~~~-~~-~~  114 (248)
                      |||+||.+|.++.++|++++.  +|++..|..+. +...+.+    .+.         ...+++++.+|++++. .+ ++
T Consensus         1 lTGaTGflG~~ll~~Ll~~~~~~~I~cLvR~~~~-~~~~~rl~~~l~~~~~~~~~~~~~~~ri~~v~GDl~~~~lGL~~~   79 (249)
T PF07993_consen    1 LTGATGFLGSHLLEELLRQPPDVKIYCLVRASSS-QSALERLKDALKEYGLWDDLDKEALSRIEVVEGDLSQPNLGLSDE   79 (249)
T ss_dssp             EE-TTSHHHHHHHHHHHHHS-TTEEEEEE-SSSH-HHHHHHHHGGG-SS-HHHHH-HHHTTTEEEEE--TTSGGGG--HH
T ss_pred             CcCCCcHHHHHHHHHHHcCCCCcEEEEEEeCccc-ccchhhhhhhcccccchhhhhhhhhccEEEEeccccccccCCChH
Confidence            799999999999999999876  89999997643 1222222    111         1458999999999963 11 12


Q ss_pred             HHHHHHhHcCCccEEEEccccCCcccccccCChHHHHHHHHhhhHHHHHHHHHHhhhhhhcCCeEEEEcCccccccC---
Q 044010          115 LVEETMNHFGRLDHLVNNAGISSVALFEDIVNITDFKQIMNINFWGSVYTTRFAVPHLRYTKGKIVVLSSAASWLTA---  191 (248)
Q Consensus       115 ~~~~~~~~~g~id~vv~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~g~iV~isS~~~~~~~---  191 (248)
                      .++++.+   ++|++||+|+......        ++++..++|+.|+.++++.+...   +..+++++||.......   
T Consensus        80 ~~~~L~~---~v~~IiH~Aa~v~~~~--------~~~~~~~~NV~gt~~ll~la~~~---~~~~~~~iSTa~v~~~~~~~  145 (249)
T PF07993_consen   80 DYQELAE---EVDVIIHCAASVNFNA--------PYSELRAVNVDGTRNLLRLAAQG---KRKRFHYISTAYVAGSRPGT  145 (249)
T ss_dssp             HHHHHHH---H--EEEE--SS-SBS---------S--EEHHHHHHHHHHHHHHHTSS---S---EEEEEEGGGTTS-TTT
T ss_pred             Hhhcccc---ccceeeecchhhhhcc--------cchhhhhhHHHHHHHHHHHHHhc---cCcceEEeccccccCCCCCc
Confidence            2333322   5999999999765432        23446678999999999998743   11389999993221111   


Q ss_pred             -----------------CCCccchHHHHHHHHHHHHHHHHhCCCeEEEEEecCccccCccccc
Q 044010          192 -----------------PRMSFYNASKAALVLFFETLRVELGSDVGVTIVTPGFIESELTQGK  237 (248)
Q Consensus       192 -----------------~~~~~Y~~sKaal~~l~~~la~~~~~~i~v~~v~pg~v~T~~~~~~  237 (248)
                                       .....|..||..-|.+.+..+.+.  ++.+..+.||.|-.+-....
T Consensus       146 ~~~~~~~~~~~~~~~~~~~~~gY~~SK~~aE~~l~~a~~~~--g~p~~I~Rp~~i~g~~~~G~  206 (249)
T PF07993_consen  146 IEEKVYPEEEDDLDPPQGFPNGYEQSKWVAERLLREAAQRH--GLPVTIYRPGIIVGDSRTGW  206 (249)
T ss_dssp             --SSS-HHH--EEE--TTSEE-HHHHHHHHHHHHHHHHHHH-----EEEEEE-EEE-SSSSS-
T ss_pred             ccccccccccccchhhccCCccHHHHHHHHHHHHHHHHhcC--CceEEEEecCcccccCCCce
Confidence                             112479999999999999998874  36788888888866443333

A sequence-related jojoba acyl CoA reductase is also included.; PDB: 4DQV_A.

>PRK07201 short chain dehydrogenase; Provisional

Probab=99.41  E-value=1.3e-11  Score=117.28  Aligned_cols=163  Identities=20%  Similarity=0.210  Sum_probs=112.2

Q ss_pred             EEEEcCCCChHHHHHHHHHH--HcCCeEEEEeCCcchHHHHHHHHHhhCCCcEEEEEccCCCHHH--HHHHHHHHHhHcC
Q 044010           49 VVIITGASSGIGEHLAYEYA--RRGACLALCARREKSLEEVADTAREIGSPDVITIRADVSKVDD--CRSLVEETMNHFG  124 (248)
Q Consensus        49 ~~lVtGg~~gIG~aia~~l~--~~G~~V~l~~r~~~~~~~~~~~l~~~~~~~v~~~~~D~~~~~~--~~~~~~~~~~~~g  124 (248)
                      ++|||||+|.||.+++++|+  ++|++|.+++|+... +...+.....+..++.++.+|++|.+.  ..+..+++    .
T Consensus         2 ~ILVTGatGfIG~~lv~~Ll~~~~g~~V~~l~R~~~~-~~~~~~~~~~~~~~v~~~~~Dl~~~~~~~~~~~~~~l----~   76 (657)
T PRK07201          2 RYFVTGGTGFIGRRLVSRLLDRRREATVHVLVRRQSL-SRLEALAAYWGADRVVPLVGDLTEPGLGLSEADIAEL----G   76 (657)
T ss_pred             eEEEeCCccHHHHHHHHHHHhcCCCCEEEEEECcchH-HHHHHHHHhcCCCcEEEEecccCCccCCcCHHHHHHh----c
Confidence            69999999999999999999  579999999996532 222222222222478899999999531  01122222    3


Q ss_pred             CccEEEEccccCCcccccccCChHHHHHHHHhhhHHHHHHHHHHhhhhhhcCCeEEEEcCccccccC-------------
Q 044010          125 RLDHLVNNAGISSVALFEDIVNITDFKQIMNINFWGSVYTTRFAVPHLRYTKGKIVVLSSAASWLTA-------------  191 (248)
Q Consensus       125 ~id~vv~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~g~iV~isS~~~~~~~-------------  191 (248)
                      ++|++||+||.....        ....+..++|+.++.++++.+...   ...++|++||...+...             
T Consensus        77 ~~D~Vih~Aa~~~~~--------~~~~~~~~~nv~gt~~ll~~a~~~---~~~~~v~~SS~~v~g~~~~~~~e~~~~~~~  145 (657)
T PRK07201         77 DIDHVVHLAAIYDLT--------ADEEAQRAANVDGTRNVVELAERL---QAATFHHVSSIAVAGDYEGVFREDDFDEGQ  145 (657)
T ss_pred             CCCEEEECceeecCC--------CCHHHHHHHHhHHHHHHHHHHHhc---CCCeEEEEeccccccCccCccccccchhhc
Confidence            799999999965422        112456678999998888876532   23689999987664321             


Q ss_pred             CCCccchHHHHHHHHHHHHHHHHhCCCeEEEEEecCccccC
Q 044010          192 PRMSFYNASKAALVLFFETLRVELGSDVGVTIVTPGFIESE  232 (248)
Q Consensus       192 ~~~~~Y~~sKaal~~l~~~la~~~~~~i~v~~v~pg~v~T~  232 (248)
                      +....|+.+|...+.+.+.   .  .++++..+.|+.+..+
T Consensus       146 ~~~~~Y~~sK~~~E~~~~~---~--~g~~~~ilRp~~v~G~  181 (657)
T PRK07201        146 GLPTPYHRTKFEAEKLVRE---E--CGLPWRVYRPAVVVGD  181 (657)
T ss_pred             CCCCchHHHHHHHHHHHHH---c--CCCcEEEEcCCeeeec
Confidence            1234699999999998753   1  2478888899888553

>PLN02996 fatty acyl-CoA reductase

Probab=99.40  E-value=2.2e-11  Score=111.84  Aligned_cols=169  Identities=20%  Similarity=0.238  Sum_probs=116.9

Q ss_pred             CCCCCEEEEcCCCChHHHHHHHHHHHcCC---eEEEEeCCcch---HHHHHHHH---------HhhC--------CCcEE
Q 044010           44 DVSGKVVIITGASSGIGEHLAYEYARRGA---CLALCARREKS---LEEVADTA---------REIG--------SPDVI  100 (248)
Q Consensus        44 ~~~~k~~lVtGg~~gIG~aia~~l~~~G~---~V~l~~r~~~~---~~~~~~~l---------~~~~--------~~~v~  100 (248)
                      -++||+++||||||.||..++++|++.+.   +|++..|..+.   .+....++         ++..        ..++.
T Consensus         8 ~~~~k~VlvTGaTGFlG~~ll~~LL~~~~~v~~I~~LvR~~~~~~~~~rl~~~~~~~~~f~~~~~~~~~~~~~~~~~kv~   87 (491)
T PLN02996          8 FLENKTILVTGATGFLAKIFVEKILRVQPNVKKLYLLLRASDAKSATQRLHDEVIGKDLFKVLREKLGENLNSLISEKVT   87 (491)
T ss_pred             HhCCCeEEEeCCCcHHHHHHHHHHHhhCCCCCEEEEEEeCCCCCCHHHHHHHHHhhchHHHHHHHhcchhhhhhhhcCEE
Confidence            46899999999999999999999998642   67888886532   11111111         1111        14789


Q ss_pred             EEEccCCC-------HHHHHHHHHHHHhHcCCccEEEEccccCCcccccccCChHHHHHHHHhhhHHHHHHHHHHhhhhh
Q 044010          101 TIRADVSK-------VDDCRSLVEETMNHFGRLDHLVNNAGISSVALFEDIVNITDFKQIMNINFWGSVYTTRFAVPHLR  173 (248)
Q Consensus       101 ~~~~D~~~-------~~~~~~~~~~~~~~~g~id~vv~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~  173 (248)
                      ++..|+++       .+.++++++       ++|+|||+|+.....        ++.+..+.+|+.|+.++++.+...  
T Consensus        88 ~i~GDl~~~~LGLs~~~~~~~l~~-------~vD~ViH~AA~v~~~--------~~~~~~~~~Nv~gt~~ll~~a~~~--  150 (491)
T PLN02996         88 PVPGDISYDDLGVKDSNLREEMWK-------EIDIVVNLAATTNFD--------ERYDVALGINTLGALNVLNFAKKC--  150 (491)
T ss_pred             EEecccCCcCCCCChHHHHHHHHh-------CCCEEEECccccCCc--------CCHHHHHHHHHHHHHHHHHHHHhc--
Confidence            99999984       333444443       699999999976421        235678899999999999887542  


Q ss_pred             hcCCeEEEEcCccccccCC-------------------------------------------------------------
Q 044010          174 YTKGKIVVLSSAASWLTAP-------------------------------------------------------------  192 (248)
Q Consensus       174 ~~~g~iV~isS~~~~~~~~-------------------------------------------------------------  192 (248)
                      ....++|++||...+....                                                             
T Consensus       151 ~~~k~~V~vST~~vyG~~~~~i~E~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  230 (491)
T PLN02996        151 VKVKMLLHVSTAYVCGEKSGLILEKPFHMGETLNGNRKLDINEEKKLVKEKLKELNEQDASEEEITQAMKDLGMERAKLH  230 (491)
T ss_pred             CCCCeEEEEeeeEEecCCCceeeeecCCCcccccccccCChHHHHHHHHHHHHHHHhhcCCHHHHHHHhhhhchhHHHhC
Confidence            1224899999876542210                                                             


Q ss_pred             -CCccchHHHHHHHHHHHHHHHHhCCCeEEEEEecCccccCc
Q 044010          193 -RMSFYNASKAALVLFFETLRVELGSDVGVTIVTPGFIESEL  233 (248)
Q Consensus       193 -~~~~Y~~sKaal~~l~~~la~~~~~~i~v~~v~pg~v~T~~  233 (248)
                       ....|+.||+..+.+++..+    .++.+..+.|+.|..+.
T Consensus       231 ~~pn~Y~~TK~~aE~lv~~~~----~~lpv~i~RP~~V~G~~  268 (491)
T PLN02996        231 GWPNTYVFTKAMGEMLLGNFK----ENLPLVIIRPTMITSTY  268 (491)
T ss_pred             CCCCchHhhHHHHHHHHHHhc----CCCCEEEECCCEeccCC
Confidence             11359999999999986543    35888888888886654

>PF08643 DUF1776: Fungal family of unknown function (DUF1776); InterPro: IPR013952 This is a fungal protein of unknown function

Probab=99.39  E-value=3.8e-11  Score=102.20  Aligned_cols=182  Identities=22%  Similarity=0.287  Sum_probs=142.7

Q ss_pred             CCEEEEcCC-CChHHHHHHHHHHHcCCeEEEEeCCcchHHHHHHHHHhhCCCcEEEEEccCCCHHHHHHHHHHHHhHcC-
Q 044010           47 GKVVIITGA-SSGIGEHLAYEYARRGACLALCARREKSLEEVADTAREIGSPDVITIRADVSKVDDCRSLVEETMNHFG-  124 (248)
Q Consensus        47 ~k~~lVtGg-~~gIG~aia~~l~~~G~~V~l~~r~~~~~~~~~~~l~~~~~~~v~~~~~D~~~~~~~~~~~~~~~~~~g-  124 (248)
                      ...++|.|. +.-|++.+|..|-++|+-|+++..+.++.+..    ++.....+.....|..+..++...+++..+.+. 
T Consensus         3 ~evVvI~Gs~~~PltR~la~DLeRRGFIV~v~~~~~ed~~~v----e~e~~~dI~~L~ld~~~~~~~~~~l~~f~~~L~~   78 (299)
T PF08643_consen    3 KEVVVIAGSPHDPLTRSLALDLERRGFIVYVTVSSAEDEKYV----ESEDRPDIRPLWLDDSDPSSIHASLSRFASLLSR   78 (299)
T ss_pred             eeEEEEECCCCCccHHHHHHHHhhCCeEEEEEeCCHHHHHHH----HhccCCCCCCcccCCCCCcchHHHHHHHHHHhcC
Confidence            467899986 68999999999999999999999887643333    222233678888899888777777777776554 


Q ss_pred             -------------CccEEEEccccCCcccccccCChHHHHHHHHhhhHHHHHHHHHHhhhhhh---cCCeEEEEc-Cccc
Q 044010          125 -------------RLDHLVNNAGISSVALFEDIVNITDFKQIMNINFWGSVYTTRFAVPHLRY---TKGKIVVLS-SAAS  187 (248)
Q Consensus       125 -------------~id~vv~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~---~~g~iV~is-S~~~  187 (248)
                                   ++..+|.......+..+.+..+.++|...+++|+..++...+.++|.+..   .+.++|.++ |..+
T Consensus        79 p~~p~~~~~~h~l~L~svi~~Psl~yp~gPie~i~~s~~~~~ln~~ll~~~~~~q~lLPlL~~~~~~~~~iil~~Psi~s  158 (299)
T PF08643_consen   79 PHVPFPGAPPHHLQLKSVIFIPSLSYPTGPIETISPSSWADELNTRLLTPILTIQGLLPLLRSRSNQKSKIILFNPSISS  158 (299)
T ss_pred             CCCCCCCCCCceeEEEEEEEecCCCCCCCCccccCHHHHHHHHHHHHHHHHHHHHHHHHHHHhccCCCceEEEEeCchhh
Confidence                         24555555554433333334678999999999999999999999999986   567776664 5656


Q ss_pred             cccCCCCccchHHHHHHHHHHHHHHHHhCCC-eEEEEEecCccccC
Q 044010          188 WLTAPRMSFYNASKAALVLFFETLRVELGSD-VGVTIVTPGFIESE  232 (248)
Q Consensus       188 ~~~~~~~~~Y~~sKaal~~l~~~la~~~~~~-i~v~~v~pg~v~T~  232 (248)
                      ....|.+++-.+..+++.++++.|++|+++. |.|..+..|.++-.
T Consensus       159 sl~~PfhspE~~~~~al~~~~~~LrrEl~~~~I~V~~i~LG~l~i~  204 (299)
T PF08643_consen  159 SLNPPFHSPESIVSSALSSFFTSLRRELRPHNIDVTQIKLGNLDIG  204 (299)
T ss_pred             ccCCCccCHHHHHHHHHHHHHHHHHHHhhhcCCceEEEEeeeeccc
Confidence            7778889999999999999999999999864 99999999988665

One of the proteins P32792 from SWISSPROT has been localised to the mitochondria [].

>CHL00194 ycf39 Ycf39; Provisional

Probab=99.36  E-value=2.8e-11  Score=105.25  Aligned_cols=147  Identities=10%  Similarity=0.072  Sum_probs=103.3

Q ss_pred             EEEEcCCCChHHHHHHHHHHHcCCeEEEEeCCcchHHHHHHHHHhhCCCcEEEEEccCCCHHHHHHHHHHHHhHcCCccE
Q 044010           49 VVIITGASSGIGEHLAYEYARRGACLALCARREKSLEEVADTAREIGSPDVITIRADVSKVDDCRSLVEETMNHFGRLDH  128 (248)
Q Consensus        49 ~~lVtGg~~gIG~aia~~l~~~G~~V~l~~r~~~~~~~~~~~l~~~~~~~v~~~~~D~~~~~~~~~~~~~~~~~~g~id~  128 (248)
                      +++||||+|.||.+++++|+++|++|.+++|+.++.+    .+..   ..+.++.+|++|.+++.++++       ++|+
T Consensus         2 kIlVtGatG~iG~~lv~~Ll~~g~~V~~l~R~~~~~~----~l~~---~~v~~v~~Dl~d~~~l~~al~-------g~d~   67 (317)
T CHL00194          2 SLLVIGATGTLGRQIVRQALDEGYQVRCLVRNLRKAS----FLKE---WGAELVYGDLSLPETLPPSFK-------GVTA   67 (317)
T ss_pred             EEEEECCCcHHHHHHHHHHHHCCCeEEEEEcChHHhh----hHhh---cCCEEEECCCCCHHHHHHHHC-------CCCE
Confidence            6999999999999999999999999999999864322    1211   257889999999998877765       6899


Q ss_pred             EEEccccCCcccccccCChHHHHHHHHhhhHHHHHHHHHHhhhhhhcCCeEEEEcCccccccCCCCccchHHHHHHHHHH
Q 044010          129 LVNNAGISSVALFEDIVNITDFKQIMNINFWGSVYTTRFAVPHLRYTKGKIVVLSSAASWLTAPRMSFYNASKAALVLFF  208 (248)
Q Consensus       129 vv~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~g~iV~isS~~~~~~~~~~~~Y~~sKaal~~l~  208 (248)
                      +||.++....       +   .....++|+.++.++++++...   .-.++|++||..+.. . +...|..+|...+.+.
T Consensus        68 Vi~~~~~~~~-------~---~~~~~~~~~~~~~~l~~aa~~~---gvkr~I~~Ss~~~~~-~-~~~~~~~~K~~~e~~l  132 (317)
T CHL00194         68 IIDASTSRPS-------D---LYNAKQIDWDGKLALIEAAKAA---KIKRFIFFSILNAEQ-Y-PYIPLMKLKSDIEQKL  132 (317)
T ss_pred             EEECCCCCCC-------C---ccchhhhhHHHHHHHHHHHHHc---CCCEEEEeccccccc-c-CCChHHHHHHHHHHHH
Confidence            9998763211       1   1234556888888888776532   225899999854321 1 2346888898877765


Q ss_pred             HHHHHHhCCCeEEEEEecCccc
Q 044010          209 ETLRVELGSDVGVTIVTPGFIE  230 (248)
Q Consensus       209 ~~la~~~~~~i~v~~v~pg~v~  230 (248)
                      +    +.  +++...+.|+.+.
T Consensus       133 ~----~~--~l~~tilRp~~~~  148 (317)
T CHL00194        133 K----KS--GIPYTIFRLAGFF  148 (317)
T ss_pred             H----Hc--CCCeEEEeecHHh
Confidence            3    22  3566667777543

>PF13460 NAD_binding_10: NADH(P)-binding ; PDB: 3OH8_A 3E8X_A 3GPI_A 3QVO_A 2Q46_B 1YBM_B 1XQ6_B 2Q4B_B 3EW7_A 3IUS_B

Probab=99.35  E-value=7.3e-11  Score=94.19  Aligned_cols=140  Identities=26%  Similarity=0.380  Sum_probs=102.9

Q ss_pred             EEEcCCCChHHHHHHHHHHHcCCeEEEEeCCcchHHHHHHHHHhhCCCcEEEEEccCCCHHHHHHHHHHHHhHcCCccEE
Q 044010           50 VIITGASSGIGEHLAYEYARRGACLALCARREKSLEEVADTAREIGSPDVITIRADVSKVDDCRSLVEETMNHFGRLDHL  129 (248)
Q Consensus        50 ~lVtGg~~gIG~aia~~l~~~G~~V~l~~r~~~~~~~~~~~l~~~~~~~v~~~~~D~~~~~~~~~~~~~~~~~~g~id~v  129 (248)
                      ++|+||||.+|..++++|+++|++|.++.|++++.++         ..++.++.+|+.|.+++.+++.       +.|.+
T Consensus         1 I~V~GatG~vG~~l~~~L~~~~~~V~~~~R~~~~~~~---------~~~~~~~~~d~~d~~~~~~al~-------~~d~v   64 (183)
T PF13460_consen    1 ILVFGATGFVGRALAKQLLRRGHEVTALVRSPSKAED---------SPGVEIIQGDLFDPDSVKAALK-------GADAV   64 (183)
T ss_dssp             EEEETTTSHHHHHHHHHHHHTTSEEEEEESSGGGHHH---------CTTEEEEESCTTCHHHHHHHHT-------TSSEE
T ss_pred             eEEECCCChHHHHHHHHHHHCCCEEEEEecCchhccc---------ccccccceeeehhhhhhhhhhh-------hcchh
Confidence            6899999999999999999999999999999887665         3489999999999988877765       79999


Q ss_pred             EEccccCCcccccccCChHHHHHHHHhhhHHHHHHHHHHhhhhhhcC-CeEEEEcCccccccCCCC---------ccchH
Q 044010          130 VNNAGISSVALFEDIVNITDFKQIMNINFWGSVYTTRFAVPHLRYTK-GKIVVLSSAASWLTAPRM---------SFYNA  199 (248)
Q Consensus       130 v~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~-g~iV~isS~~~~~~~~~~---------~~Y~~  199 (248)
                      |+++|....          +            ....+.+.+.+++.+ .++|++||.......+..         ..|..
T Consensus        65 i~~~~~~~~----------~------------~~~~~~~~~a~~~~~~~~~v~~s~~~~~~~~~~~~~~~~~~~~~~~~~  122 (183)
T PF13460_consen   65 IHAAGPPPK----------D------------VDAAKNIIEAAKKAGVKRVVYLSSAGVYRDPPGLFSDEDKPIFPEYAR  122 (183)
T ss_dssp             EECCHSTTT----------H------------HHHHHHHHHHHHHTTSSEEEEEEETTGTTTCTSEEEGGTCGGGHHHHH
T ss_pred             hhhhhhhcc----------c------------ccccccccccccccccccceeeeccccCCCCCcccccccccchhhhHH
Confidence            999965432          1            223344444444333 689999987766543331         24556


Q ss_pred             HHHHHHHHHHHHHHHhCCCeEEEEEecCccccCc
Q 044010          200 SKAALVLFFETLRVELGSDVGVTIVTPGFIESEL  233 (248)
Q Consensus       200 sKaal~~l~~~la~~~~~~i~v~~v~pg~v~T~~  233 (248)
                      .|...+.+.+    +  .+++...+.||.+..+.
T Consensus       123 ~~~~~e~~~~----~--~~~~~~ivrp~~~~~~~  150 (183)
T PF13460_consen  123 DKREAEEALR----E--SGLNWTIVRPGWIYGNP  150 (183)
T ss_dssp             HHHHHHHHHH----H--STSEEEEEEESEEEBTT
T ss_pred             HHHHHHHHHH----h--cCCCEEEEECcEeEeCC
Confidence            6655544331    2  25899999999987765

...

>PF04321 RmlD_sub_bind: RmlD substrate binding domain; InterPro: IPR005913 dTDP-4-dehydrorhamnose reductase (1

Probab=99.34  E-value=1.3e-11  Score=105.92  Aligned_cols=126  Identities=20%  Similarity=0.219  Sum_probs=95.0

Q ss_pred             EEEEcCCCChHHHHHHHHHHHcCCeEEEEeCCcchHHHHHHHHHhhCCCcEEEEEccCCCHHHHHHHHHHHHhHcCCccE
Q 044010           49 VVIITGASSGIGEHLAYEYARRGACLALCARREKSLEEVADTAREIGSPDVITIRADVSKVDDCRSLVEETMNHFGRLDH  128 (248)
Q Consensus        49 ~~lVtGg~~gIG~aia~~l~~~G~~V~l~~r~~~~~~~~~~~l~~~~~~~v~~~~~D~~~~~~~~~~~~~~~~~~g~id~  128 (248)
                      ++||||++|-||.++.+.|.++|++|+..+|+                      .+|++|.+++.+++++.     ++|+
T Consensus         2 riLI~GasG~lG~~l~~~l~~~~~~v~~~~r~----------------------~~dl~d~~~~~~~~~~~-----~pd~   54 (286)
T PF04321_consen    2 RILITGASGFLGSALARALKERGYEVIATSRS----------------------DLDLTDPEAVAKLLEAF-----KPDV   54 (286)
T ss_dssp             EEEEETTTSHHHHHHHHHHTTTSEEEEEESTT----------------------CS-TTSHHHHHHHHHHH-------SE
T ss_pred             EEEEECCCCHHHHHHHHHHhhCCCEEEEeCch----------------------hcCCCCHHHHHHHHHHh-----CCCe
Confidence            68999999999999999999999999998776                      57999999999999876     6999


Q ss_pred             EEEccccCCcccccccCChHHHHHHHHhhhHHHHHHHHHHhhhhhhcCCeEEEEcCccccccCC-----------CCccc
Q 044010          129 LVNNAGISSVALFEDIVNITDFKQIMNINFWGSVYTTRFAVPHLRYTKGKIVVLSSAASWLTAP-----------RMSFY  197 (248)
Q Consensus       129 vv~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~g~iV~isS~~~~~~~~-----------~~~~Y  197 (248)
                      |||+||...+...+     ++.+..+.+|+.++..+.+.+.    +.+.++|++||...+.+..           +...|
T Consensus        55 Vin~aa~~~~~~ce-----~~p~~a~~iN~~~~~~la~~~~----~~~~~li~~STd~VFdG~~~~~y~E~d~~~P~~~Y  125 (286)
T PF04321_consen   55 VINCAAYTNVDACE-----KNPEEAYAINVDATKNLAEACK----ERGARLIHISTDYVFDGDKGGPYTEDDPPNPLNVY  125 (286)
T ss_dssp             EEE------HHHHH-----HSHHHHHHHHTHHHHHHHHHHH----HCT-EEEEEEEGGGS-SSTSSSB-TTS----SSHH
T ss_pred             EeccceeecHHhhh-----hChhhhHHHhhHHHHHHHHHHH----HcCCcEEEeeccEEEcCCcccccccCCCCCCCCHH
Confidence            99999987654332     3456788899999999998875    3557999999987664431           24579


Q ss_pred             hHHHHHHHHHHHH
Q 044010          198 NASKAALVLFFET  210 (248)
Q Consensus       198 ~~sKaal~~l~~~  210 (248)
                      |.+|...|...+.
T Consensus       126 G~~K~~~E~~v~~  138 (286)
T PF04321_consen  126 GRSKLEGEQAVRA  138 (286)
T ss_dssp             HHHHHHHHHHHHH
T ss_pred             HHHHHHHHHHHHH
Confidence            9999999987776

1.1.133 from EC) catalyzes the last of 4 steps in making dTDP-rhamnose, a precursor of LPS molecules such as core antigen and O-antigen. dTDP-6-deoxy-L-mannose + NADP+ = dTDP-4-dehydro-6-deoxy-L-mannose + NADPH ; GO: 0008831 dTDP-4-dehydrorhamnose reductase activity, 0045226 extracellular polysaccharide biosynthetic process; PDB: 2YDX_D 2YDY_A 3SC6_C 1VL0_B 2GGS_A 1KBZ_A 1KC3_A 1KC1_A 1N2S_A.

>PLN02778 3,5-epimerase/4-reductase

Probab=99.33  E-value=3.9e-11  Score=103.54  Aligned_cols=132  Identities=14%  Similarity=0.133  Sum_probs=90.1

Q ss_pred             CCEEEEcCCCChHHHHHHHHHHHcCCeEEEEeCCcchHHHHHHHHHhhCCCcEEEEEccCCCHHHHHHHHHHHHhHcCCc
Q 044010           47 GKVVIITGASSGIGEHLAYEYARRGACLALCARREKSLEEVADTAREIGSPDVITIRADVSKVDDCRSLVEETMNHFGRL  126 (248)
Q Consensus        47 ~k~~lVtGg~~gIG~aia~~l~~~G~~V~l~~r~~~~~~~~~~~l~~~~~~~v~~~~~D~~~~~~~~~~~~~~~~~~g~i  126 (248)
                      .+++|||||+|.||.+++++|+++|++|....                         .|+++.+.+...++..     ++
T Consensus         9 ~~kiLVtG~tGfiG~~l~~~L~~~g~~V~~~~-------------------------~~~~~~~~v~~~l~~~-----~~   58 (298)
T PLN02778          9 TLKFLIYGKTGWIGGLLGKLCQEQGIDFHYGS-------------------------GRLENRASLEADIDAV-----KP   58 (298)
T ss_pred             CCeEEEECCCCHHHHHHHHHHHhCCCEEEEec-------------------------CccCCHHHHHHHHHhc-----CC
Confidence            46899999999999999999999999886432                         2344555555444432     69


Q ss_pred             cEEEEccccCCcccccccCChHHHHHHHHhhhHHHHHHHHHHhhhhhhcCCeEEEEcCcccccc-----------C----
Q 044010          127 DHLVNNAGISSVALFEDIVNITDFKQIMNINFWGSVYTTRFAVPHLRYTKGKIVVLSSAASWLT-----------A----  191 (248)
Q Consensus       127 d~vv~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~g~iV~isS~~~~~~-----------~----  191 (248)
                      |+|||+||....... + ...++..+.+++|+.++.++++.+...    +.+.+++||...+.+           .    
T Consensus        59 D~ViH~Aa~~~~~~~-~-~~~~~p~~~~~~Nv~gt~~ll~aa~~~----gv~~v~~sS~~vy~~~~~~p~~~~~~~~Ee~  132 (298)
T PLN02778         59 THVFNAAGVTGRPNV-D-WCESHKVETIRANVVGTLTLADVCRER----GLVLTNYATGCIFEYDDAHPLGSGIGFKEED  132 (298)
T ss_pred             CEEEECCcccCCCCc-h-hhhhCHHHHHHHHHHHHHHHHHHHHHh----CCCEEEEecceEeCCCCCCCcccCCCCCcCC
Confidence            999999997643211 1 012445678999999999999998643    223455554332110           0    


Q ss_pred             ---CCCccchHHHHHHHHHHHHHHHH
Q 044010          192 ---PRMSFYNASKAALVLFFETLRVE  214 (248)
Q Consensus       192 ---~~~~~Y~~sKaal~~l~~~la~~  214 (248)
                         +....|+.||.+.+.+++.++..
T Consensus       133 ~p~~~~s~Yg~sK~~~E~~~~~y~~~  158 (298)
T PLN02778        133 TPNFTGSFYSKTKAMVEELLKNYENV  158 (298)
T ss_pred             CCCCCCCchHHHHHHHHHHHHHhhcc
Confidence               11257999999999999886543

>KOG1430 consensus C-3 sterol dehydrogenase/3-beta-hydroxysteroid dehydrogenase and related dehydrogenases [Lipid transport and metabolism; Amino acid transport and metabolism]

Probab=99.30  E-value=5.7e-11  Score=103.61  Aligned_cols=171  Identities=17%  Similarity=0.125  Sum_probs=124.0

Q ss_pred             CCCCEEEEcCCCChHHHHHHHHHHHcC--CeEEEEeCCcchHHHHHHHHHhhCCCcEEEEEccCCCHHHHHHHHHHHHhH
Q 044010           45 VSGKVVIITGASSGIGEHLAYEYARRG--ACLALCARREKSLEEVADTAREIGSPDVITIRADVSKVDDCRSLVEETMNH  122 (248)
Q Consensus        45 ~~~k~~lVtGg~~gIG~aia~~l~~~G--~~V~l~~r~~~~~~~~~~~l~~~~~~~v~~~~~D~~~~~~~~~~~~~~~~~  122 (248)
                      .++.+++||||+|.+|++++++|.++|  .++.+.+..+....-..++... ...++.++.+|+.|..++..+++     
T Consensus         2 ~~~~~vlVtGG~GflG~hlv~~L~~~~~~~~irv~D~~~~~~~~~~e~~~~-~~~~v~~~~~D~~~~~~i~~a~~-----   75 (361)
T KOG1430|consen    2 EKKLSVLVTGGSGFLGQHLVQALLENELKLEIRVVDKTPTQSNLPAELTGF-RSGRVTVILGDLLDANSISNAFQ-----   75 (361)
T ss_pred             CcCCEEEEECCccHHHHHHHHHHHhcccccEEEEeccCccccccchhhhcc-cCCceeEEecchhhhhhhhhhcc-----
Confidence            467899999999999999999999998  6899999876422211222211 23478899999999999988876     


Q ss_pred             cCCccEEEEccccCCcccccccCChHHHHHHHHhhhHHHHHHHHHHhhhhhhcCCeEEEEcCccccccC-----------
Q 044010          123 FGRLDHLVNNAGISSVALFEDIVNITDFKQIMNINFWGSVYTTRFAVPHLRYTKGKIVVLSSAASWLTA-----------  191 (248)
Q Consensus       123 ~g~id~vv~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~g~iV~isS~~~~~~~-----------  191 (248)
                        +. .++|+|+...+...     ..+.+..+++|+.|+-++.+.+...   ...++|++||.....+.           
T Consensus        76 --~~-~Vvh~aa~~~~~~~-----~~~~~~~~~vNV~gT~nvi~~c~~~---~v~~lIYtSs~~Vvf~g~~~~n~~E~~p  144 (361)
T KOG1430|consen   76 --GA-VVVHCAASPVPDFV-----ENDRDLAMRVNVNGTLNVIEACKEL---GVKRLIYTSSAYVVFGGEPIINGDESLP  144 (361)
T ss_pred             --Cc-eEEEeccccCcccc-----ccchhhheeecchhHHHHHHHHHHh---CCCEEEEecCceEEeCCeecccCCCCCC
Confidence              56 67777765544322     2356788999999999988887644   33589999998776532           


Q ss_pred             -C--CCccchHHHHHHHHHHHHHHHHhCCCeEEEEEecCccccCcc
Q 044010          192 -P--RMSFYNASKAALVLFFETLRVELGSDVGVTIVTPGFIESELT  234 (248)
Q Consensus       192 -~--~~~~Y~~sKaal~~l~~~la~~~~~~i~v~~v~pg~v~T~~~  234 (248)
                       |  ....|+.||+--|.+++..+.  +.+..-.++.|..|..|-.
T Consensus       145 ~p~~~~d~Y~~sKa~aE~~Vl~an~--~~~l~T~aLR~~~IYGpgd  188 (361)
T KOG1430|consen  145 YPLKHIDPYGESKALAEKLVLEANG--SDDLYTCALRPPGIYGPGD  188 (361)
T ss_pred             CccccccccchHHHHHHHHHHHhcC--CCCeeEEEEccccccCCCC
Confidence             2  235899999999988877765  2346777777777655543

>PRK05865 hypothetical protein; Provisional

Probab=99.25  E-value=2.5e-10  Score=109.92  Aligned_cols=130  Identities=19%  Similarity=0.177  Sum_probs=97.1

Q ss_pred             EEEEcCCCChHHHHHHHHHHHcCCeEEEEeCCcchHHHHHHHHHhhCCCcEEEEEccCCCHHHHHHHHHHHHhHcCCccE
Q 044010           49 VVIITGASSGIGEHLAYEYARRGACLALCARREKSLEEVADTAREIGSPDVITIRADVSKVDDCRSLVEETMNHFGRLDH  128 (248)
Q Consensus        49 ~~lVtGg~~gIG~aia~~l~~~G~~V~l~~r~~~~~~~~~~~l~~~~~~~v~~~~~D~~~~~~~~~~~~~~~~~~g~id~  128 (248)
                      +++||||+|+||.+++++|+++|++|++++|+....      .    ...+.++.+|++|.+++.++++       ++|+
T Consensus         2 kILVTGATGfIGs~La~~Ll~~G~~Vv~l~R~~~~~------~----~~~v~~v~gDL~D~~~l~~al~-------~vD~   64 (854)
T PRK05865          2 RIAVTGASGVLGRGLTARLLSQGHEVVGIARHRPDS------W----PSSADFIAADIRDATAVESAMT-------GADV   64 (854)
T ss_pred             EEEEECCCCHHHHHHHHHHHHCcCEEEEEECCchhh------c----ccCceEEEeeCCCHHHHHHHHh-------CCCE
Confidence            699999999999999999999999999999975321      1    1257789999999999888775       5899


Q ss_pred             EEEccccCCcccccccCChHHHHHHHHhhhHHHHHHHHHHhhhhhhcCCeEEEEcCccccccCCCCccchHHHHHHHHHH
Q 044010          129 LVNNAGISSVALFEDIVNITDFKQIMNINFWGSVYTTRFAVPHLRYTKGKIVVLSSAASWLTAPRMSFYNASKAALVLFF  208 (248)
Q Consensus       129 vv~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~g~iV~isS~~~~~~~~~~~~Y~~sKaal~~l~  208 (248)
                      +||+|+...+              .+++|+.++.++++++...   ..+++|++||..              |.+.+.+.
T Consensus        65 VVHlAa~~~~--------------~~~vNv~GT~nLLeAa~~~---gvkr~V~iSS~~--------------K~aaE~ll  113 (854)
T PRK05865         65 VAHCAWVRGR--------------NDHINIDGTANVLKAMAET---GTGRIVFTSSGH--------------QPRVEQML  113 (854)
T ss_pred             EEECCCcccc--------------hHHHHHHHHHHHHHHHHHc---CCCeEEEECCcH--------------HHHHHHHH
Confidence            9999975321              3567999988877765421   236899999853              87777766


Q ss_pred             HHHHHHhCCCeEEEEEecCccccC
Q 044010          209 ETLRVELGSDVGVTIVTPGFIESE  232 (248)
Q Consensus       209 ~~la~~~~~~i~v~~v~pg~v~T~  232 (248)
                      +    ++  ++++..+.|+.+..+
T Consensus       114 ~----~~--gl~~vILRp~~VYGP  131 (854)
T PRK05865        114 A----DC--GLEWVAVRCALIFGR  131 (854)
T ss_pred             H----Hc--CCCEEEEEeceEeCC
Confidence            3    22  356666666666543

>COG1089 Gmd GDP-D-mannose dehydratase [Cell envelope biogenesis, outer membrane]

Probab=99.23  E-value=3.6e-11  Score=100.07  Aligned_cols=178  Identities=19%  Similarity=0.139  Sum_probs=132.8

Q ss_pred             CCCEEEEcCCCChHHHHHHHHHHHcCCeEEEEeCCcchHHHH---HHHHHhhCCCcEEEEEccCCCHHHHHHHHHHHHhH
Q 044010           46 SGKVVIITGASSGIGEHLAYEYARRGACLALCARREKSLEEV---ADTAREIGSPDVITIRADVSKVDDCRSLVEETMNH  122 (248)
Q Consensus        46 ~~k~~lVtGg~~gIG~aia~~l~~~G~~V~l~~r~~~~~~~~---~~~l~~~~~~~v~~~~~D~~~~~~~~~~~~~~~~~  122 (248)
                      .+|++||||-||-=|.=+|+.|++.||.|.-+.|+.......   ..++....+.+++.+.+|++|..++.++++++   
T Consensus         1 ~~K~ALITGITGQDGsYLa~lLLekGY~VhGi~Rrss~~n~~ri~L~~~~~~~~~~l~l~~gDLtD~~~l~r~l~~v---   77 (345)
T COG1089           1 MGKVALITGITGQDGSYLAELLLEKGYEVHGIKRRSSSFNTPRIHLYEDPHLNDPRLHLHYGDLTDSSNLLRILEEV---   77 (345)
T ss_pred             CCceEEEecccCCchHHHHHHHHhcCcEEEEEeeccccCCcccceeccccccCCceeEEEeccccchHHHHHHHHhc---
Confidence            368999999999999999999999999999998864322211   11122223446889999999999999999987   


Q ss_pred             cCCccEEEEccccCCcccccccCChHHHHHHHHhhhHHHHHHHHHHhhhhhhcCCeEEEEcCccccc-----------cC
Q 044010          123 FGRLDHLVNNAGISSVALFEDIVNITDFKQIMNINFWGSVYTTRFAVPHLRYTKGKIVVLSSAASWL-----------TA  191 (248)
Q Consensus       123 ~g~id~vv~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~g~iV~isS~~~~~-----------~~  191 (248)
                        ++|-++|.++-....     .+.+....+.+++..|+.+++.+..-.- +.+-++..-||+.-+.           |.
T Consensus        78 --~PdEIYNLaAQS~V~-----vSFe~P~~T~~~~~iGtlrlLEaiR~~~-~~~~rfYQAStSE~fG~v~~~pq~E~TPF  149 (345)
T COG1089          78 --QPDEIYNLAAQSHVG-----VSFEQPEYTADVDAIGTLRLLEAIRILG-EKKTRFYQASTSELYGLVQEIPQKETTPF  149 (345)
T ss_pred             --Cchhheecccccccc-----ccccCcceeeeechhHHHHHHHHHHHhC-CcccEEEecccHHhhcCcccCccccCCCC
Confidence              799999999866544     2445567888999999999999876443 2346788778766543           22


Q ss_pred             CCCccchHHHHHHHHHHHHHHHHhC----CCeEEEEEecCccccCcc
Q 044010          192 PRMSFYNASKAALVLFFETLRVELG----SDVGVTIVTPGFIESELT  234 (248)
Q Consensus       192 ~~~~~Y~~sKaal~~l~~~la~~~~----~~i~v~~v~pg~v~T~~~  234 (248)
                      .+.++|++||.+-..++...+..|+    .+|-+|.=+|.==+|=.+
T Consensus       150 yPrSPYAvAKlYa~W~tvNYResYgl~AcnGILFNHESP~Rge~FVT  196 (345)
T COG1089         150 YPRSPYAVAKLYAYWITVNYRESYGLFACNGILFNHESPLRGETFVT  196 (345)
T ss_pred             CCCCHHHHHHHHHHheeeehHhhcCceeecceeecCCCCCCccceeh
Confidence            3567999999999999999988885    237777666654333333

>COG1091 RfbD dTDP-4-dehydrorhamnose reductase [Cell envelope biogenesis, outer membrane]

Probab=99.22  E-value=2.5e-10  Score=96.41  Aligned_cols=126  Identities=22%  Similarity=0.249  Sum_probs=104.6

Q ss_pred             EEEcCCCChHHHHHHHHHHHcCCeEEEEeCCcchHHHHHHHHHhhCCCcEEEEEccCCCHHHHHHHHHHHHhHcCCccEE
Q 044010           50 VIITGASSGIGEHLAYEYARRGACLALCARREKSLEEVADTAREIGSPDVITIRADVSKVDDCRSLVEETMNHFGRLDHL  129 (248)
Q Consensus        50 ~lVtGg~~gIG~aia~~l~~~G~~V~l~~r~~~~~~~~~~~l~~~~~~~v~~~~~D~~~~~~~~~~~~~~~~~~g~id~v  129 (248)
                      +||||++|-+|.++++.|. .+++|+.++|..                      +|++|.+.+.+++++.     ++|+|
T Consensus         3 iLi~G~~GqLG~~L~~~l~-~~~~v~a~~~~~----------------------~Ditd~~~v~~~i~~~-----~PDvV   54 (281)
T COG1091           3 ILITGANGQLGTELRRALP-GEFEVIATDRAE----------------------LDITDPDAVLEVIRET-----RPDVV   54 (281)
T ss_pred             EEEEcCCChHHHHHHHHhC-CCceEEeccCcc----------------------ccccChHHHHHHHHhh-----CCCEE
Confidence            8999999999999999998 667999888754                      7999999999999986     79999


Q ss_pred             EEccccCCcccccccCChHHHHHHHHhhhHHHHHHHHHHhhhhhhcCCeEEEEcCccccccCC-----------CCccch
Q 044010          130 VNNAGISSVALFEDIVNITDFKQIMNINFWGSVYTTRFAVPHLRYTKGKIVVLSSAASWLTAP-----------RMSFYN  198 (248)
Q Consensus       130 v~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~g~iV~isS~~~~~~~~-----------~~~~Y~  198 (248)
                      ||+|++......+     .+.+..+.+|..++.++.+++.    +.+..+|++||...+.+..           +...||
T Consensus        55 In~AAyt~vD~aE-----~~~e~A~~vNa~~~~~lA~aa~----~~ga~lVhiSTDyVFDG~~~~~Y~E~D~~~P~nvYG  125 (281)
T COG1091          55 INAAAYTAVDKAE-----SEPELAFAVNATGAENLARAAA----EVGARLVHISTDYVFDGEKGGPYKETDTPNPLNVYG  125 (281)
T ss_pred             EECcccccccccc-----CCHHHHHHhHHHHHHHHHHHHH----HhCCeEEEeecceEecCCCCCCCCCCCCCCChhhhh
Confidence            9999988765443     3357889999999999999975    4457899999987765432           345799


Q ss_pred             HHHHHHHHHHHHHH
Q 044010          199 ASKAALVLFFETLR  212 (248)
Q Consensus       199 ~sKaal~~l~~~la  212 (248)
                      .||.+-+..++...
T Consensus       126 ~sKl~GE~~v~~~~  139 (281)
T COG1091         126 RSKLAGEEAVRAAG  139 (281)
T ss_pred             HHHHHHHHHHHHhC
Confidence            99999998776654

>TIGR02114 coaB_strep phosphopantothenate--cysteine ligase, streptococcal

Probab=99.19  E-value=8.2e-11  Score=97.52  Aligned_cols=108  Identities=9%  Similarity=0.149  Sum_probs=79.1

Q ss_pred             EEEEcCC-CChHHHHHHHHHHHcCCeEEEEeCCcchHHHHHHHHHhhCCCcEEEEEccCCCHHHHHHHHHHHHhHcCCcc
Q 044010           49 VVIITGA-SSGIGEHLAYEYARRGACLALCARREKSLEEVADTAREIGSPDVITIRADVSKVDDCRSLVEETMNHFGRLD  127 (248)
Q Consensus        49 ~~lVtGg-~~gIG~aia~~l~~~G~~V~l~~r~~~~~~~~~~~l~~~~~~~v~~~~~D~~~~~~~~~~~~~~~~~~g~id  127 (248)
                      +=.||.. +||||+++|++|+++|++|+++++...        +....     ...+|+++.++++++++++.+.++++|
T Consensus        16 VR~itN~SSGgIG~AIA~~la~~Ga~Vvlv~~~~~--------l~~~~-----~~~~Dv~d~~s~~~l~~~v~~~~g~iD   82 (227)
T TIGR02114        16 VRSITNHSTGHLGKIITETFLSAGHEVTLVTTKRA--------LKPEP-----HPNLSIREIETTKDLLITLKELVQEHD   82 (227)
T ss_pred             ceeecCCcccHHHHHHHHHHHHCCCEEEEEcChhh--------ccccc-----CCcceeecHHHHHHHHHHHHHHcCCCC
Confidence            3345655 579999999999999999999876311        11100     145899999999999999999999999


Q ss_pred             EEEEccccCCcccccccCChHHHHHHHHhhhHHHHHHHHHHhhhhh
Q 044010          128 HLVNNAGISSVALFEDIVNITDFKQIMNINFWGSVYTTRFAVPHLR  173 (248)
Q Consensus       128 ~vv~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~  173 (248)
                      ++|||||+....+..+ .+.++|++.   +..+.+.+.+..-..++
T Consensus        83 iLVnnAgv~d~~~~~~-~s~e~~~~~---~~~~~~~~~~~~~~Ki~  124 (227)
T TIGR02114        83 ILIHSMAVSDYTPVYM-TDLEQVQAS---DNLNEFLSKQNHEAKIS  124 (227)
T ss_pred             EEEECCEeccccchhh-CCHHHHhhh---cchhhhhccccccCCcc
Confidence            9999999876655554 577889877   44455555553333333

In most bacteria, a single bifunctional protein catalyses phosphopantothenoylcysteine decarboxylase and phosphopantothenate--cysteine ligase activities, sequential steps in coenzyme A biosynthesis (see TIGR00521). These activities reside in separate proteins encoded by tandem genes in some bacterial lineages. This model describes proteins from the genera Streptococcus and Enterococcus homologous to the C-terminal region of TIGR00521, corresponding to phosphopantothenate--cysteine ligase activity.

>PLN02503 fatty acyl-CoA reductase 2

Probab=99.19  E-value=1.9e-09  Score=100.70  Aligned_cols=127  Identities=17%  Similarity=0.244  Sum_probs=88.6

Q ss_pred             CCCCEEEEcCCCChHHHHHHHHHHHcCC---eEEEEeCCcch--H-HHHHHHH---------HhhC--------CCcEEE
Q 044010           45 VSGKVVIITGASSGIGEHLAYEYARRGA---CLALCARREKS--L-EEVADTA---------REIG--------SPDVIT  101 (248)
Q Consensus        45 ~~~k~~lVtGg~~gIG~aia~~l~~~G~---~V~l~~r~~~~--~-~~~~~~l---------~~~~--------~~~v~~  101 (248)
                      ++||+++||||||.||..++++|++.+.   +|.+..|....  . +...+++         ++..        ..++..
T Consensus       117 ~~~k~VlVTGaTGFLGk~LlekLLr~~~~v~kIy~LvR~k~~~~a~eRl~~~l~~~~lf~~l~~~~g~~~~~~~~~Ki~~  196 (605)
T PLN02503        117 LRGKNFLITGATGFLAKVLIEKILRTNPDVGKIYLLIKAKDKEAAIERLKNEVIDAELFKCLQETHGKSYQSFMLSKLVP  196 (605)
T ss_pred             hcCCEEEEcCCchHHHHHHHHHHHHhCCCCcEEEEEEecCCchhHHHHHHHHHhhhhhHHHHHHhcCccccccccccEEE
Confidence            5899999999999999999999998753   67888885432  1 1211121         1111        236889


Q ss_pred             EEccCCCHH------HHHHHHHHHHhHcCCccEEEEccccCCcccccccCChHHHHHHHHhhhHHHHHHHHHHhhhhhhc
Q 044010          102 IRADVSKVD------DCRSLVEETMNHFGRLDHLVNNAGISSVALFEDIVNITDFKQIMNINFWGSVYTTRFAVPHLRYT  175 (248)
Q Consensus       102 ~~~D~~~~~------~~~~~~~~~~~~~g~id~vv~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~  175 (248)
                      +..|+++..      ..+.+.+       .+|++||+|+.....        ++.+..+++|+.++.++++.+...-  .
T Consensus       197 v~GDl~d~~LGLs~~~~~~L~~-------~vDiVIH~AA~v~f~--------~~~~~a~~vNV~GT~nLLelA~~~~--~  259 (605)
T PLN02503        197 VVGNVCESNLGLEPDLADEIAK-------EVDVIINSAANTTFD--------ERYDVAIDINTRGPCHLMSFAKKCK--K  259 (605)
T ss_pred             EEeeCCCcccCCCHHHHHHHHh-------cCCEEEECccccccc--------cCHHHHHHHHHHHHHHHHHHHHHcC--C
Confidence            999999872      3333222       599999999976421        3466788899999999998875431  1


Q ss_pred             CCeEEEEcCcccc
Q 044010          176 KGKIVVLSSAASW  188 (248)
Q Consensus       176 ~g~iV~isS~~~~  188 (248)
                      ..++|++||...+
T Consensus       260 lk~fV~vSTayVy  272 (605)
T PLN02503        260 LKLFLQVSTAYVN  272 (605)
T ss_pred             CCeEEEccCceee
Confidence            2478999886654

>KOG1429 consensus dTDP-glucose 4-6-dehydratase/UDP-glucuronic acid decarboxylase [Carbohydrate transport and metabolism; Cell wall/membrane/envelope biogenesis]

Probab=99.16  E-value=3.1e-10  Score=94.50  Aligned_cols=155  Identities=17%  Similarity=0.177  Sum_probs=114.9

Q ss_pred             CCCCCEEEEcCCCChHHHHHHHHHHHcCCeEEEEeCCcchHHHHHHHHHhhCCCcEEEEEccCCCHHHHHHHHHHHHhHc
Q 044010           44 DVSGKVVIITGASSGIGEHLAYEYARRGACLALCARREKSLEEVADTAREIGSPDVITIRADVSKVDDCRSLVEETMNHF  123 (248)
Q Consensus        44 ~~~~k~~lVtGg~~gIG~aia~~l~~~G~~V~l~~r~~~~~~~~~~~l~~~~~~~v~~~~~D~~~~~~~~~~~~~~~~~~  123 (248)
                      ...+++++||||+|.||.+++.+|..+|++|++++.-..+.+...+.+-...  .++.+..|+..+     ++.      
T Consensus        24 p~~~lrI~itGgaGFIgSHLvdkLm~egh~VIa~Dn~ftg~k~n~~~~~~~~--~fel~~hdv~~p-----l~~------   90 (350)
T KOG1429|consen   24 PSQNLRILITGGAGFIGSHLVDKLMTEGHEVIALDNYFTGRKENLEHWIGHP--NFELIRHDVVEP-----LLK------   90 (350)
T ss_pred             CCCCcEEEEecCcchHHHHHHHHHHhcCCeEEEEecccccchhhcchhccCc--ceeEEEeechhH-----HHH------
Confidence            4678999999999999999999999999999999987665554444443333  466677777554     333      


Q ss_pred             CCccEEEEccccCCcccccccCChHHHHHHHHhhhHHHHHHHHHHhhhhhhcCCeEEEEcCcccccc-------------
Q 044010          124 GRLDHLVNNAGISSVALFEDIVNITDFKQIMNINFWGSVYTTRFAVPHLRYTKGKIVVLSSAASWLT-------------  190 (248)
Q Consensus       124 g~id~vv~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~g~iV~isS~~~~~~-------------  190 (248)
                       .+|.++|.|+..++....     ...-.++.+|.+++.+.+..+.    +-+.+++..||+..+..             
T Consensus        91 -evD~IyhLAapasp~~y~-----~npvktIktN~igtln~lglak----rv~aR~l~aSTseVYgdp~~hpq~e~ywg~  160 (350)
T KOG1429|consen   91 -EVDQIYHLAAPASPPHYK-----YNPVKTIKTNVIGTLNMLGLAK----RVGARFLLASTSEVYGDPLVHPQVETYWGN  160 (350)
T ss_pred             -HhhhhhhhccCCCCcccc-----cCccceeeecchhhHHHHHHHH----HhCceEEEeecccccCCcccCCCccccccc
Confidence             578889999987765322     2235678899999999888764    33468888888776532             


Q ss_pred             ---CCCCccchHHHHHHHHHHHHHHHHhCCCeEE
Q 044010          191 ---APRMSFYNASKAALVLFFETLRVELGSDVGV  221 (248)
Q Consensus       191 ---~~~~~~Y~~sKaal~~l~~~la~~~~~~i~v  221 (248)
                         ....+.|...|...+.|+....++.+-.+|+
T Consensus       161 vnpigpr~cydegKr~aE~L~~~y~k~~giE~rI  194 (350)
T KOG1429|consen  161 VNPIGPRSCYDEGKRVAETLCYAYHKQEGIEVRI  194 (350)
T ss_pred             cCcCCchhhhhHHHHHHHHHHHHhhcccCcEEEE
Confidence               1234689999999999999999998644554

>PRK08309 short chain dehydrogenase; Provisional

Probab=99.15  E-value=4.6e-10  Score=89.49  Aligned_cols=85  Identities=20%  Similarity=0.295  Sum_probs=71.4

Q ss_pred             EEEEcCCCChHHHHHHHHHHHcCCeEEEEeCCcchHHHHHHHHHhhCCCcEEEEEccCCCHHHHHHHHHHHHhHcCCccE
Q 044010           49 VVIITGASSGIGEHLAYEYARRGACLALCARREKSLEEVADTAREIGSPDVITIRADVSKVDDCRSLVEETMNHFGRLDH  128 (248)
Q Consensus        49 ~~lVtGg~~gIG~aia~~l~~~G~~V~l~~r~~~~~~~~~~~l~~~~~~~v~~~~~D~~~~~~~~~~~~~~~~~~g~id~  128 (248)
                      +++||||+ |+|.+++++|+++|++|.+.+|+.++.+.....+..  ..++.++.+|++|.+++.++++.+.+++|++|.
T Consensus         2 ~vlVtGGt-G~gg~la~~L~~~G~~V~v~~R~~~~~~~l~~~l~~--~~~i~~~~~Dv~d~~sv~~~i~~~l~~~g~id~   78 (177)
T PRK08309          2 HALVIGGT-GMLKRVSLWLCEKGFHVSVIARREVKLENVKRESTT--PESITPLPLDYHDDDALKLAIKSTIEKNGPFDL   78 (177)
T ss_pred             EEEEECcC-HHHHHHHHHHHHCcCEEEEEECCHHHHHHHHHHhhc--CCcEEEEEccCCCHHHHHHHHHHHHHHcCCCeE
Confidence            68999998 777789999999999999999987766655544432  236888999999999999999999999999999


Q ss_pred             EEEccccC
Q 044010          129 LVNNAGIS  136 (248)
Q Consensus       129 vv~~ag~~  136 (248)
                      +|+.+-..
T Consensus        79 lv~~vh~~   86 (177)
T PRK08309         79 AVAWIHSS   86 (177)
T ss_pred             EEEecccc
Confidence            99876543

>PLN02260 probable rhamnose biosynthetic enzyme

Probab=99.12  E-value=2.2e-09  Score=102.41  Aligned_cols=141  Identities=13%  Similarity=0.141  Sum_probs=98.4

Q ss_pred             CCEEEEcCCCChHHHHHHHHHHHcCCeEEEEeCCcchHHHHHHHHHhhCCCcEEEEEccCCCHHHHHHHHHHHHhHcCCc
Q 044010           47 GKVVIITGASSGIGEHLAYEYARRGACLALCARREKSLEEVADTAREIGSPDVITIRADVSKVDDCRSLVEETMNHFGRL  126 (248)
Q Consensus        47 ~k~~lVtGg~~gIG~aia~~l~~~G~~V~l~~r~~~~~~~~~~~l~~~~~~~v~~~~~D~~~~~~~~~~~~~~~~~~g~i  126 (248)
                      .+++|||||+|.||.++++.|.++|++|.+                         ...|++|.+.+.++++..     ++
T Consensus       380 ~mkiLVtGa~G~iG~~l~~~L~~~g~~v~~-------------------------~~~~l~d~~~v~~~i~~~-----~p  429 (668)
T PLN02260        380 SLKFLIYGRTGWIGGLLGKLCEKQGIAYEY-------------------------GKGRLEDRSSLLADIRNV-----KP  429 (668)
T ss_pred             CceEEEECCCchHHHHHHHHHHhCCCeEEe-------------------------eccccccHHHHHHHHHhh-----CC
Confidence            457999999999999999999999988732                         113577888777776653     79


Q ss_pred             cEEEEccccCCcccccccCChHHHHHHHHhhhHHHHHHHHHHhhhhhhcCCeEEEEcCccccc-----------cC----
Q 044010          127 DHLVNNAGISSVALFEDIVNITDFKQIMNINFWGSVYTTRFAVPHLRYTKGKIVVLSSAASWL-----------TA----  191 (248)
Q Consensus       127 d~vv~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~g~iV~isS~~~~~-----------~~----  191 (248)
                      |+|||+|+....... + ...++....+.+|+.++.++++.+...    +.+++++||...+.           +.    
T Consensus       430 d~Vih~Aa~~~~~~~-~-~~~~~~~~~~~~N~~gt~~l~~a~~~~----g~~~v~~Ss~~v~~~~~~~~~~~~~p~~E~~  503 (668)
T PLN02260        430 THVFNAAGVTGRPNV-D-WCESHKVETIRANVVGTLTLADVCREN----GLLMMNFATGCIFEYDAKHPEGSGIGFKEED  503 (668)
T ss_pred             CEEEECCcccCCCCC-C-hHHhCHHHHHHHHhHHHHHHHHHHHHc----CCeEEEEcccceecCCcccccccCCCCCcCC
Confidence            999999997643211 1 122456788899999999999998643    33566666644321           11    


Q ss_pred             ---CCCccchHHHHHHHHHHHHHHHHhCCCeEEEEEe
Q 044010          192 ---PRMSFYNASKAALVLFFETLRVELGSDVGVTIVT  225 (248)
Q Consensus       192 ---~~~~~Y~~sKaal~~l~~~la~~~~~~i~v~~v~  225 (248)
                         +....|+.||.+.+.+++.....+  .+|+..+.
T Consensus       504 ~~~~~~~~Yg~sK~~~E~~~~~~~~~~--~~r~~~~~  538 (668)
T PLN02260        504 KPNFTGSFYSKTKAMVEELLREYDNVC--TLRVRMPI  538 (668)
T ss_pred             CCCCCCChhhHHHHHHHHHHHhhhhhe--EEEEEEec
Confidence               112579999999999988764322  25555554

>COG3320 Putative dehydrogenase domain of multifunctional non-ribosomal peptide synthetases and related enzymes [Secondary metabolites biosynthesis, transport, and catabolism]

Probab=99.11  E-value=5.2e-09  Score=90.84  Aligned_cols=166  Identities=22%  Similarity=0.275  Sum_probs=116.1

Q ss_pred             CEEEEcCCCChHHHHHHHHHHHc-CCeEEEEeCCcch---HHHHHHHHH------hhCCCcEEEEEccCCCH------HH
Q 044010           48 KVVIITGASSGIGEHLAYEYARR-GACLALCARREKS---LEEVADTAR------EIGSPDVITIRADVSKV------DD  111 (248)
Q Consensus        48 k~~lVtGg~~gIG~aia~~l~~~-G~~V~l~~r~~~~---~~~~~~~l~------~~~~~~v~~~~~D~~~~------~~  111 (248)
                      +++++|||||.+|..+...|+.+ .++|++.-|-.+.   .++..+.+.      +....+++.+..|++..      ..
T Consensus         1 ~~vlLTGATGFLG~yLl~eLL~~~~~kv~cLVRA~s~E~a~~RL~~~~~~~~~~~e~~~~ri~vv~gDl~e~~lGL~~~~   80 (382)
T COG3320           1 RNVLLTGATGFLGAYLLLELLDRSDAKVICLVRAQSDEAALARLEKTFDLYRHWDELSADRVEVVAGDLAEPDLGLSERT   80 (382)
T ss_pred             CeEEEecCchHhHHHHHHHHHhcCCCcEEEEEecCCHHHHHHHHHHHhhhhhhhhhhhcceEEEEecccccccCCCCHHH
Confidence            57999999999999999998876 4589888885441   222222222      23446899999999843      33


Q ss_pred             HHHHHHHHHhHcCCccEEEEccccCCcccccccCChHHHHHHHHhhhHHHHHHHHHHhhhhhhcCCeEEEEcCccccccC
Q 044010          112 CRSLVEETMNHFGRLDHLVNNAGISSVALFEDIVNITDFKQIMNINFWGSVYTTRFAVPHLRYTKGKIVVLSSAASWLTA  191 (248)
Q Consensus       112 ~~~~~~~~~~~~g~id~vv~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~g~iV~isS~~~~~~~  191 (248)
                      ..++.+       .+|.+|||++....-        ..+.+....|+.|+..+++.+...   +...+.++||.+.....
T Consensus        81 ~~~La~-------~vD~I~H~gA~Vn~v--------~pYs~L~~~NVlGT~evlrLa~~g---k~Kp~~yVSsisv~~~~  142 (382)
T COG3320          81 WQELAE-------NVDLIIHNAALVNHV--------FPYSELRGANVLGTAEVLRLAATG---KPKPLHYVSSISVGETE  142 (382)
T ss_pred             HHHHhh-------hcceEEecchhhccc--------CcHHHhcCcchHhHHHHHHHHhcC---CCceeEEEeeeeecccc
Confidence            444433       699999999966422        334566778999999999987633   12358888887754321


Q ss_pred             --------------------CCCccchHHHHHHHHHHHHHHHHhCCCeEEEEEecCccccCcc
Q 044010          192 --------------------PRMSFYNASKAALVLFFETLRVELGSDVGVTIVTPGFIESELT  234 (248)
Q Consensus       192 --------------------~~~~~Y~~sKaal~~l~~~la~~~~~~i~v~~v~pg~v~T~~~  234 (248)
                                          .....|+-||-+-|.+++.....   ++++..+.||.|-.+-.
T Consensus       143 ~~~~~~~~~~~~~~~~~~~~~~~~GY~~SKwvaE~Lvr~A~~r---GLpv~I~Rpg~I~gds~  202 (382)
T COG3320         143 YYSNFTVDFDEISPTRNVGQGLAGGYGRSKWVAEKLVREAGDR---GLPVTIFRPGYITGDSR  202 (382)
T ss_pred             ccCCCccccccccccccccCccCCCcchhHHHHHHHHHHHhhc---CCCeEEEecCeeeccCc
Confidence                                11257999999999988766554   47888899998855443

>TIGR03443 alpha_am_amid L-aminoadipate-semialdehyde dehydrogenase

Probab=99.08  E-value=7.4e-09  Score=106.17  Aligned_cols=169  Identities=16%  Similarity=0.217  Sum_probs=114.1

Q ss_pred             CCEEEEcCCCChHHHHHHHHHHHcC----CeEEEEeCCcchHHHH---HHHHHhhC------CCcEEEEEccCCCHHH--
Q 044010           47 GKVVIITGASSGIGEHLAYEYARRG----ACLALCARREKSLEEV---ADTAREIG------SPDVITIRADVSKVDD--  111 (248)
Q Consensus        47 ~k~~lVtGg~~gIG~aia~~l~~~G----~~V~l~~r~~~~~~~~---~~~l~~~~------~~~v~~~~~D~~~~~~--  111 (248)
                      .++++|||++|.+|.+++++|+++|    ++|+...|+....+..   .+.....+      ..++.++.+|+++..-  
T Consensus       971 ~~~VlvTGatGflG~~l~~~Ll~~~~~~~~~V~~l~R~~~~~~~~~~l~~~~~~~~~~~~~~~~~i~~~~gDl~~~~lgl 1050 (1389)
T TIGR03443       971 PITVFLTGATGFLGSFILRDLLTRRSNSNFKVFAHVRAKSEEAGLERLRKTGTTYGIWDEEWASRIEVVLGDLSKEKFGL 1050 (1389)
T ss_pred             CceEEEeCCccccHHHHHHHHHhcCCCCCcEEEEEECcCChHHHHHHHHHHHHHhCCCchhhhcceEEEeccCCCccCCc
Confidence            5789999999999999999999987    6899988976443222   11111111      1368899999986410  


Q ss_pred             HHHHHHHHHhHcCCccEEEEccccCCcccccccCChHHHHHHHHhhhHHHHHHHHHHhhhhhhcCCeEEEEcCcccccc-
Q 044010          112 CRSLVEETMNHFGRLDHLVNNAGISSVALFEDIVNITDFKQIMNINFWGSVYTTRFAVPHLRYTKGKIVVLSSAASWLT-  190 (248)
Q Consensus       112 ~~~~~~~~~~~~g~id~vv~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~g~iV~isS~~~~~~-  190 (248)
                      -.+.++++.   ..+|++||+|+.....        ..+......|+.|+.++++.+...   +..+++++||.+.+.. 
T Consensus      1051 ~~~~~~~l~---~~~d~iiH~Aa~~~~~--------~~~~~~~~~nv~gt~~ll~~a~~~---~~~~~v~vSS~~v~~~~ 1116 (1389)
T TIGR03443      1051 SDEKWSDLT---NEVDVIIHNGALVHWV--------YPYSKLRDANVIGTINVLNLCAEG---KAKQFSFVSSTSALDTE 1116 (1389)
T ss_pred             CHHHHHHHH---hcCCEEEECCcEecCc--------cCHHHHHHhHHHHHHHHHHHHHhC---CCceEEEEeCeeecCcc
Confidence            011222222   3699999999975421        123334457999999999887532   2248999999765421 


Q ss_pred             ----------------CC-----------CCccchHHHHHHHHHHHHHHHHhCCCeEEEEEecCccccC
Q 044010          191 ----------------AP-----------RMSFYNASKAALVLFFETLRVELGSDVGVTIVTPGFIESE  232 (248)
Q Consensus       191 ----------------~~-----------~~~~Y~~sKaal~~l~~~la~~~~~~i~v~~v~pg~v~T~  232 (248)
                                      .+           ....|+.||.+.+.+++..+.   .++++..+.||.|..+
T Consensus      1117 ~~~~~~~~~~~~~~~~~~e~~~~~~~~~~~~~~Y~~sK~~aE~l~~~~~~---~g~~~~i~Rpg~v~G~ 1182 (1389)
T TIGR03443      1117 YYVNLSDELVQAGGAGIPESDDLMGSSKGLGTGYGQSKWVAEYIIREAGK---RGLRGCIVRPGYVTGD 1182 (1389)
T ss_pred             cccchhhhhhhccCCCCCcccccccccccCCCChHHHHHHHHHHHHHHHh---CCCCEEEECCCccccC
Confidence                            00           123599999999999887543   2588999999988655

Members of this protein family are L-aminoadipate-semialdehyde dehydrogenase (EC 1.2.1.31), product of the LYS2 gene. It is also called alpha-aminoadipate reductase. In fungi, lysine is synthesized via aminoadipate. Currently, all members of this family are fungal.

>TIGR01777 yfcH conserved hypothetical protein TIGR01777

Probab=98.99  E-value=1.2e-08  Score=87.14  Aligned_cols=157  Identities=12%  Similarity=0.052  Sum_probs=90.5

Q ss_pred             EEEcCCCChHHHHHHHHHHHcCCeEEEEeCCcchHHHHHHHHHhhCCCcEEEEEccCCCHHHHHHHHHHHHhHcCCccEE
Q 044010           50 VIITGASSGIGEHLAYEYARRGACLALCARREKSLEEVADTAREIGSPDVITIRADVSKVDDCRSLVEETMNHFGRLDHL  129 (248)
Q Consensus        50 ~lVtGg~~gIG~aia~~l~~~G~~V~l~~r~~~~~~~~~~~l~~~~~~~v~~~~~D~~~~~~~~~~~~~~~~~~g~id~v  129 (248)
                      +|||||+|.||.+++++|+++|++|+.++|+.++.+...         ...  ..|... ...       .+.+.++|+|
T Consensus         1 vlVtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~---------~~~--~~~~~~-~~~-------~~~~~~~D~V   61 (292)
T TIGR01777         1 ILITGGTGFIGRALTQRLTKDGHEVTILTRSPPAGANTK---------WEG--YKPWAP-LAE-------SEALEGADAV   61 (292)
T ss_pred             CEEEcccchhhHHHHHHHHHcCCEEEEEeCCCCCCCccc---------cee--eecccc-cch-------hhhcCCCCEE
Confidence            589999999999999999999999999999876532211         000  112221 111       2234579999


Q ss_pred             EEccccCCcccccccCChHHHHHHHHhhhHHHHHHHHHHhhhhhhcCCeEEEEcCccccccC----------C-CCccch
Q 044010          130 VNNAGISSVALFEDIVNITDFKQIMNINFWGSVYTTRFAVPHLRYTKGKIVVLSSAASWLTA----------P-RMSFYN  198 (248)
Q Consensus       130 v~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~g~iV~isS~~~~~~~----------~-~~~~Y~  198 (248)
                      ||+||......  . .+.+.....+++|+.++..+++++...-. .+..+++.|+...+...          + +...|+
T Consensus        62 vh~a~~~~~~~--~-~~~~~~~~~~~~n~~~~~~l~~a~~~~~~-~~~~~i~~S~~~~yg~~~~~~~~E~~~~~~~~~~~  137 (292)
T TIGR01777        62 INLAGEPIADK--R-WTEERKQEIRDSRIDTTRALVEAIAAAEQ-KPKVFISASAVGYYGTSEDRVFTEEDSPAGDDFLA  137 (292)
T ss_pred             EECCCCCcccc--c-CCHHHHHHHHhcccHHHHHHHHHHHhcCC-CceEEEEeeeEEEeCCCCCCCcCcccCCCCCChHH
Confidence            99999653211  1 12345567888999999888888753210 01234444443222110          0 011223


Q ss_pred             HHHHHHHHHHHHHHHHhCCCeEEEEEecCccccC
Q 044010          199 ASKAALVLFFETLRVELGSDVGVTIVTPGFIESE  232 (248)
Q Consensus       199 ~sKaal~~l~~~la~~~~~~i~v~~v~pg~v~T~  232 (248)
                      ..+...+.....+.   ..++.+..+.|+.+..+
T Consensus       138 ~~~~~~e~~~~~~~---~~~~~~~ilR~~~v~G~  168 (292)
T TIGR01777       138 ELCRDWEEAAQAAE---DLGTRVVLLRTGIVLGP  168 (292)
T ss_pred             HHHHHHHHHhhhch---hcCCceEEEeeeeEECC
Confidence            33333333332211   12488889999988665

This model represents a clade of proteins of unknown function including the E. coli yfcH protein.

>TIGR03649 ergot_EASG ergot alkaloid biosynthesis protein, AFUA_2G17970 family

Probab=98.96  E-value=9.4e-09  Score=87.87  Aligned_cols=140  Identities=12%  Similarity=0.134  Sum_probs=90.5

Q ss_pred             EEEEcCCCChHHHHHHHHHHHcCCeEEEEeCCcchHHHHHHHHHhhCCCcEEEEEccCCCHHHHHHHHHHHHhHcCC-cc
Q 044010           49 VVIITGASSGIGEHLAYEYARRGACLALCARREKSLEEVADTAREIGSPDVITIRADVSKVDDCRSLVEETMNHFGR-LD  127 (248)
Q Consensus        49 ~~lVtGg~~gIG~aia~~l~~~G~~V~l~~r~~~~~~~~~~~l~~~~~~~v~~~~~D~~~~~~~~~~~~~~~~~~g~-id  127 (248)
                      +++||||||.+|.+++++|+++|++|.++.|++++.+.          ..+..+.+|++|.+++.++++.. +.... +|
T Consensus         1 ~ilVtGatG~iG~~vv~~L~~~g~~V~~~~R~~~~~~~----------~~~~~~~~d~~d~~~l~~a~~~~-~~~~g~~d   69 (285)
T TIGR03649         1 TILLTGGTGKTASRIARLLQAASVPFLVASRSSSSSAG----------PNEKHVKFDWLDEDTWDNPFSSD-DGMEPEIS   69 (285)
T ss_pred             CEEEEcCCChHHHHHHHHHHhCCCcEEEEeCCCccccC----------CCCccccccCCCHHHHHHHHhcc-cCcCCcee
Confidence            37999999999999999999999999999999764321          14556789999999999988653 22334 99


Q ss_pred             EEEEccccCCcccccccCChHHHHHHHHhhhHHHHHHHHHHhhhhhhcC-CeEEEEcCccccccCCCCccchHHHHHHHH
Q 044010          128 HLVNNAGISSVALFEDIVNITDFKQIMNINFWGSVYTTRFAVPHLRYTK-GKIVVLSSAASWLTAPRMSFYNASKAALVL  206 (248)
Q Consensus       128 ~vv~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~-g~iV~isS~~~~~~~~~~~~Y~~sKaal~~  206 (248)
                      .++++++...        +  ..+.            .+.+++.+++.+ .++|++||.....+.       ..+...+.
T Consensus        70 ~v~~~~~~~~--------~--~~~~------------~~~~i~aa~~~gv~~~V~~Ss~~~~~~~-------~~~~~~~~  120 (285)
T TIGR03649        70 AVYLVAPPIP--------D--LAPP------------MIKFIDFARSKGVRRFVLLSASIIEKGG-------PAMGQVHA  120 (285)
T ss_pred             EEEEeCCCCC--------C--hhHH------------HHHHHHHHHHcCCCEEEEeeccccCCCC-------chHHHHHH
Confidence            9999876321        1  0111            112233333333 689999986543221       12322232


Q ss_pred             HHHHHHHHhCCCeEEEEEecCccccCc
Q 044010          207 FFETLRVELGSDVGVTIVTPGFIESEL  233 (248)
Q Consensus       207 l~~~la~~~~~~i~v~~v~pg~v~T~~  233 (248)
                      +.+    +. .++....+.|+++..++
T Consensus       121 ~l~----~~-~gi~~tilRp~~f~~~~  142 (285)
T TIGR03649       121 HLD----SL-GGVEYTVLRPTWFMENF  142 (285)
T ss_pred             HHH----hc-cCCCEEEEeccHHhhhh
Confidence            222    11 24778888998776554

This family consists of fungal proteins of unknown function associated with secondary metabolite biosynthesis, such as of the ergot alkaloids such as ergovaline. Nomenclature differs because gene order differs - this is EasG in Neotyphodium lolii but is designated ergot alkaloid biosynthetic protein A in several other fungi.

>PRK05579 bifunctional phosphopantothenoylcysteine decarboxylase/phosphopantothenate synthase; Validated

Probab=98.88  E-value=1.1e-08  Score=91.44  Aligned_cols=82  Identities=28%  Similarity=0.353  Sum_probs=64.8

Q ss_pred             cCCCCCEEEEcCC----------------CChHHHHHHHHHHHcCCeEEEEeCCcchHHHHHHHHHhhCCCcEEEEEccC
Q 044010           43 EDVSGKVVIITGA----------------SSGIGEHLAYEYARRGACLALCARREKSLEEVADTAREIGSPDVITIRADV  106 (248)
Q Consensus        43 ~~~~~k~~lVtGg----------------~~gIG~aia~~l~~~G~~V~l~~r~~~~~~~~~~~l~~~~~~~v~~~~~D~  106 (248)
                      .+++||++|||||                +|++|.++|+.|+++|++|++++++.+ .+         ....  ...+|+
T Consensus       184 ~~l~gk~vlITgG~T~E~ID~VR~isN~SSG~~G~aiA~~l~~~Ga~V~~v~~~~~-~~---------~~~~--~~~~dv  251 (399)
T PRK05579        184 KDLAGKRVLITAGPTREPIDPVRYITNRSSGKMGYALARAAARRGADVTLVSGPVN-LP---------TPAG--VKRIDV  251 (399)
T ss_pred             cccCCCEEEEeCCCccccccceeeeccCCcchHHHHHHHHHHHCCCEEEEeCCCcc-cc---------CCCC--cEEEcc
Confidence            4789999999999                555999999999999999999998752 11         0111  346799


Q ss_pred             CCHHHHHHHHHHHHhHcCCccEEEEccccCCcc
Q 044010          107 SKVDDCRSLVEETMNHFGRLDHLVNNAGISSVA  139 (248)
Q Consensus       107 ~~~~~~~~~~~~~~~~~g~id~vv~~ag~~~~~  139 (248)
                      ++.+++.++++   +.++++|++|||||+....
T Consensus       252 ~~~~~~~~~v~---~~~~~~DilI~~Aav~d~~  281 (399)
T PRK05579        252 ESAQEMLDAVL---AALPQADIFIMAAAVADYR  281 (399)
T ss_pred             CCHHHHHHHHH---HhcCCCCEEEEcccccccc
Confidence            99888777765   5578999999999986544

>PLN00016 RNA-binding protein; Provisional

Probab=98.85  E-value=5.5e-08  Score=86.64  Aligned_cols=150  Identities=21%  Similarity=0.252  Sum_probs=92.8

Q ss_pred             CCCCCEEEEc----CCCChHHHHHHHHHHHcCCeEEEEeCCcchHHHHHH----HHHhhCCCcEEEEEccCCCHHHHHHH
Q 044010           44 DVSGKVVIIT----GASSGIGEHLAYEYARRGACLALCARREKSLEEVAD----TAREIGSPDVITIRADVSKVDDCRSL  115 (248)
Q Consensus        44 ~~~~k~~lVt----Gg~~gIG~aia~~l~~~G~~V~l~~r~~~~~~~~~~----~l~~~~~~~v~~~~~D~~~~~~~~~~  115 (248)
                      ....+++|||    ||+|.||.+++++|+++|++|.+++|+....+....    .+.+.....+.++.+|++|   +.++
T Consensus        49 ~~~~~~VLVt~~~~GatG~iG~~lv~~L~~~G~~V~~l~R~~~~~~~~~~~~~~~~~~l~~~~v~~v~~D~~d---~~~~  125 (378)
T PLN00016         49 AVEKKKVLIVNTNSGGHAFIGFYLAKELVKAGHEVTLFTRGKEPSQKMKKEPFSRFSELSSAGVKTVWGDPAD---VKSK  125 (378)
T ss_pred             ccccceEEEEeccCCCceeEhHHHHHHHHHCCCEEEEEecCCcchhhhccCchhhhhHhhhcCceEEEecHHH---HHhh
Confidence            3445789999    999999999999999999999999998754322110    0111111247788899876   3333


Q ss_pred             HHHHHhHcCCccEEEEccccCCcccccccCChHHHHHHHHhhhHHHHHHHHHHhhhhhhcC-CeEEEEcCccccccCCC-
Q 044010          116 VEETMNHFGRLDHLVNNAGISSVALFEDIVNITDFKQIMNINFWGSVYTTRFAVPHLRYTK-GKIVVLSSAASWLTAPR-  193 (248)
Q Consensus       116 ~~~~~~~~g~id~vv~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~-g~iV~isS~~~~~~~~~-  193 (248)
                      +.     ..++|+|||+++.          +.+           +...++++    +++.+ .++|++||...+..... 
T Consensus       126 ~~-----~~~~d~Vi~~~~~----------~~~-----------~~~~ll~a----a~~~gvkr~V~~SS~~vyg~~~~~  175 (378)
T PLN00016        126 VA-----GAGFDVVYDNNGK----------DLD-----------EVEPVADW----AKSPGLKQFLFCSSAGVYKKSDEP  175 (378)
T ss_pred             hc-----cCCccEEEeCCCC----------CHH-----------HHHHHHHH----HHHcCCCEEEEEccHhhcCCCCCC
Confidence            31     1379999998652          111           12223333    33233 58999999765432211 


Q ss_pred             -------CccchHHHHHHHHHHHHHHHHhCCCeEEEEEecCccccCc
Q 044010          194 -------MSFYNASKAALVLFFETLRVELGSDVGVTIVTPGFIESEL  233 (248)
Q Consensus       194 -------~~~Y~~sKaal~~l~~~la~~~~~~i~v~~v~pg~v~T~~  233 (248)
                             ..++. +|...+.+.+    +.  ++.+..+.|+.+..+.
T Consensus       176 p~~E~~~~~p~~-sK~~~E~~l~----~~--~l~~~ilRp~~vyG~~  215 (378)
T PLN00016        176 PHVEGDAVKPKA-GHLEVEAYLQ----KL--GVNWTSFRPQYIYGPG  215 (378)
T ss_pred             CCCCCCcCCCcc-hHHHHHHHHH----Hc--CCCeEEEeceeEECCC
Confidence                   11122 7887776543    22  4778888888776653

>PRK12548 shikimate 5-dehydrogenase; Provisional

Probab=98.84  E-value=2e-08  Score=86.31  Aligned_cols=85  Identities=21%  Similarity=0.326  Sum_probs=67.0

Q ss_pred             CCCCCEEEEcCCCChHHHHHHHHHHHcCCe-EEEEeCCc---chHHHHHHHHHhhCCCcEEEEEccCCCHHHHHHHHHHH
Q 044010           44 DVSGKVVIITGASSGIGEHLAYEYARRGAC-LALCARRE---KSLEEVADTAREIGSPDVITIRADVSKVDDCRSLVEET  119 (248)
Q Consensus        44 ~~~~k~~lVtGg~~gIG~aia~~l~~~G~~-V~l~~r~~---~~~~~~~~~l~~~~~~~v~~~~~D~~~~~~~~~~~~~~  119 (248)
                      ++++|+++|+|+ ||+|++++..|++.|++ |.+.+|+.   ++.++..+++.+.+. ++....+|+++.+++++.++  
T Consensus       123 ~~~~k~vlI~GA-GGagrAia~~La~~G~~~V~I~~R~~~~~~~a~~l~~~l~~~~~-~~~~~~~d~~~~~~~~~~~~--  198 (289)
T PRK12548        123 DVKGKKLTVIGA-GGAATAIQVQCALDGAKEITIFNIKDDFYERAEQTAEKIKQEVP-ECIVNVYDLNDTEKLKAEIA--  198 (289)
T ss_pred             CcCCCEEEEECC-cHHHHHHHHHHHHCCCCEEEEEeCCchHHHHHHHHHHHHhhcCC-CceeEEechhhhhHHHhhhc--
Confidence            578999999999 69999999999999995 99999987   667777777755443 45566788888777665443  


Q ss_pred             HhHcCCccEEEEccccCC
Q 044010          120 MNHFGRLDHLVNNAGISS  137 (248)
Q Consensus       120 ~~~~g~id~vv~~ag~~~  137 (248)
                           ..|++|||....-
T Consensus       199 -----~~DilINaTp~Gm  211 (289)
T PRK12548        199 -----SSDILVNATLVGM  211 (289)
T ss_pred             -----cCCEEEEeCCCCC
Confidence                 5699999987653

>PRK12320 hypothetical protein; Provisional

Probab=98.84  E-value=4.4e-08  Score=92.79  Aligned_cols=103  Identities=17%  Similarity=0.226  Sum_probs=77.0

Q ss_pred             EEEEcCCCChHHHHHHHHHHHcCCeEEEEeCCcchHHHHHHHHHhhCCCcEEEEEccCCCHHHHHHHHHHHHhHcCCccE
Q 044010           49 VVIITGASSGIGEHLAYEYARRGACLALCARREKSLEEVADTAREIGSPDVITIRADVSKVDDCRSLVEETMNHFGRLDH  128 (248)
Q Consensus        49 ~~lVtGg~~gIG~aia~~l~~~G~~V~l~~r~~~~~~~~~~~l~~~~~~~v~~~~~D~~~~~~~~~~~~~~~~~~g~id~  128 (248)
                      ++|||||+|.||.+++++|+++|++|++++|+....          ....+.++.+|+++.. +.+++       .++|+
T Consensus         2 kILVTGAaGFIGs~La~~Ll~~G~~Vi~ldr~~~~~----------~~~~ve~v~~Dl~d~~-l~~al-------~~~D~   63 (699)
T PRK12320          2 QILVTDATGAVGRSVTRQLIAAGHTVSGIAQHPHDA----------LDPRVDYVCASLRNPV-LQELA-------GEADA   63 (699)
T ss_pred             EEEEECCCCHHHHHHHHHHHhCCCEEEEEeCChhhc----------ccCCceEEEccCCCHH-HHHHh-------cCCCE
Confidence            699999999999999999999999999999864320          1125788999999973 43333       26899


Q ss_pred             EEEccccCCcccccccCChHHHHHHHHhhhHHHHHHHHHHhhhhhhcCCeEEEEcCcc
Q 044010          129 LVNNAGISSVALFEDIVNITDFKQIMNINFWGSVYTTRFAVPHLRYTKGKIVVLSSAA  186 (248)
Q Consensus       129 vv~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~g~iV~isS~~  186 (248)
                      +||.|+....       .      ...+|+.++.++++.+.    +.+.++|++||..
T Consensus        64 VIHLAa~~~~-------~------~~~vNv~Gt~nLleAA~----~~GvRiV~~SS~~  104 (699)
T PRK12320         64 VIHLAPVDTS-------A------PGGVGITGLAHVANAAA----RAGARLLFVSQAA  104 (699)
T ss_pred             EEEcCccCcc-------c------hhhHHHHHHHHHHHHHH----HcCCeEEEEECCC
Confidence            9999986321       1      11368899988888764    3345899999864

>cd01078 NAD_bind_H4MPT_DH NADP binding domain of methylene tetrahydromethanopterin dehydrogenase

Probab=98.79  E-value=6.2e-08  Score=78.39  Aligned_cols=87  Identities=20%  Similarity=0.243  Sum_probs=70.1

Q ss_pred             ccCCCCCEEEEcCCCChHHHHHHHHHHHcCCeEEEEeCCcchHHHHHHHHHhhCCCcEEEEEccCCCHHHHHHHHHHHHh
Q 044010           42 SEDVSGKVVIITGASSGIGEHLAYEYARRGACLALCARREKSLEEVADTAREIGSPDVITIRADVSKVDDCRSLVEETMN  121 (248)
Q Consensus        42 ~~~~~~k~~lVtGg~~gIG~aia~~l~~~G~~V~l~~r~~~~~~~~~~~l~~~~~~~v~~~~~D~~~~~~~~~~~~~~~~  121 (248)
                      ..++++++++|+||+|++|+++++.|+++|++|.+++|+.++.++..+.+.+..+  .....+|..+.+++.++++    
T Consensus        23 ~~~l~~~~vlVlGgtG~iG~~~a~~l~~~g~~V~l~~R~~~~~~~l~~~l~~~~~--~~~~~~~~~~~~~~~~~~~----   96 (194)
T cd01078          23 GKDLKGKTAVVLGGTGPVGQRAAVLLAREGARVVLVGRDLERAQKAADSLRARFG--EGVGAVETSDDAARAAAIK----   96 (194)
T ss_pred             CcCCCCCEEEEECCCCHHHHHHHHHHHHCCCEEEEEcCCHHHHHHHHHHHHhhcC--CcEEEeeCCCHHHHHHHHh----
Confidence            4578999999999999999999999999999999999998888887777764443  3355678888888766664    


Q ss_pred             HcCCccEEEEccccCC
Q 044010          122 HFGRLDHLVNNAGISS  137 (248)
Q Consensus       122 ~~g~id~vv~~ag~~~  137 (248)
                         +.|++|++.+...
T Consensus        97 ---~~diVi~at~~g~  109 (194)
T cd01078          97 ---GADVVFAAGAAGV  109 (194)
T ss_pred             ---cCCEEEECCCCCc
Confidence               5898888766443

Methylene Tetrahydromethanopterin Dehydrogenase (H4MPT DH) NADP binding domain. NADP-dependent H4MPT DH catalyzes the dehydrogenation of methylene- H4MPT and methylene-tetrahydrofolate (H4F) with NADP+ as cofactor. H4F and H4MPT are both cofactors that carry the one-carbon units between the formyl and methyl oxidation level. H4F and H4MPT are structurally analogous to each other with respect to the pterin moiety, but each has distinct side chain. H4MPT is present only in anaerobic methanogenic archaea and aerobic methylotrophic proteobacteria. H4MPT seems to have evolved independently from H4F and functions as a distinct carrier in C1 metabolism. Amino acid DH-like NAD(P)-binding domains are members of the Rossmann fold superfamily and include glutamate, leucine, and phenylalanine DHs, methylene tetrahydrofolate DH, methylene-tetrahydromethanopterin DH, methylene-tetrahydropholate DH/cyclo

>KOG1202 consensus Animal-type fatty acid synthase and related proteins [Lipid transport and metabolism]

Probab=98.78  E-value=5e-08  Score=94.16  Aligned_cols=177  Identities=24%  Similarity=0.270  Sum_probs=138.8

Q ss_pred             CCCEEEEcCCCChHHHHHHHHHHHcCC-eEEEEeCCcchHHH---HHHHHHhhCCCcEEEEEccCCCHHHHHHHHHHHHh
Q 044010           46 SGKVVIITGASSGIGEHLAYEYARRGA-CLALCARREKSLEE---VADTAREIGSPDVITIRADVSKVDDCRSLVEETMN  121 (248)
Q Consensus        46 ~~k~~lVtGg~~gIG~aia~~l~~~G~-~V~l~~r~~~~~~~---~~~~l~~~~~~~v~~~~~D~~~~~~~~~~~~~~~~  121 (248)
                      ..|..+|+||=||.|..+|++|..+|+ ++++++|..-+...   ....+++.+- ++.+-..|++..+....++++.. 
T Consensus      1767 peksYii~GGLGGFGLELaqWLi~RGar~lVLtSRsGirtGYQa~~vrrWr~~GV-qV~vsT~nitt~~ga~~Li~~s~- 1844 (2376)
T KOG1202|consen 1767 PEKSYIIVGGLGGFGLELAQWLIQRGARKLVLTSRSGIRTGYQALMVRRWRRRGV-QVQVSTSNITTAEGARGLIEESN- 1844 (2376)
T ss_pred             ccceEEEeccccchhHHHHHHHHhcCceEEEEeccccchhhHHHHHHHHHHhcCe-EEEEecccchhhhhHHHHHHHhh-
Confidence            467899999999999999999999999 79999997655332   3344555553 67777789999999999998874 


Q ss_pred             HcCCccEEEEccccCCcccccccCChHHHHHHHHhhhHHHHHHHHHHhhhhhhcCCeEEEEcCccccccCCCCccchHHH
Q 044010          122 HFGRLDHLVNNAGISSVALFEDIVNITDFKQIMNINFWGSVYTTRFAVPHLRYTKGKIVVLSSAASWLTAPRMSFYNASK  201 (248)
Q Consensus       122 ~~g~id~vv~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~g~iV~isS~~~~~~~~~~~~Y~~sK  201 (248)
                      +++.+-.++|.|.+.....++++ +.++++..-+..+.+++++-+.-...-. .--.+|..||..+-++..++..|+-+.
T Consensus      1845 kl~~vGGiFnLA~VLRD~LiEnQ-t~knFk~va~pK~~~Ti~LD~~sRe~C~-~LdyFv~FSSvscGRGN~GQtNYG~aN 1922 (2376)
T KOG1202|consen 1845 KLGPVGGIFNLAAVLRDGLIENQ-TPKNFKDVAKPKYSGTINLDRVSREICP-ELDYFVVFSSVSCGRGNAGQTNYGLAN 1922 (2376)
T ss_pred             hcccccchhhHHHHHHhhhhccc-ChhHHHhhhccceeeeeehhhhhhhhCc-ccceEEEEEeecccCCCCcccccchhh
Confidence            46899999999999877777775 6799999999999999987655433211 113789999999889999999999999


Q ss_pred             HHHHHHHHHHHHHhCCCeEEEEEecCcc
Q 044010          202 AALVLFFETLRVELGSDVGVTIVTPGFI  229 (248)
Q Consensus       202 aal~~l~~~la~~~~~~i~v~~v~pg~v  229 (248)
                      ++++.+...-+.+-=|+   .+|+.|.+
T Consensus      1923 S~MERiceqRr~~GfPG---~AiQWGAI 1947 (2376)
T KOG1202|consen 1923 SAMERICEQRRHEGFPG---TAIQWGAI 1947 (2376)
T ss_pred             HHHHHHHHHhhhcCCCc---ceeeeecc
Confidence            99999988766654333   45566655

>PRK08261 fabG 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional

Probab=98.73  E-value=1.1e-07  Score=86.63  Aligned_cols=129  Identities=20%  Similarity=0.132  Sum_probs=86.8

Q ss_pred             CCEEE----EcCCCChHHHHHHHHHHHcCCeEEEEeCCcchHHHHHHHHHhhCCCcEEEEEccCCCHHHHHHHHHHHHhH
Q 044010           47 GKVVI----ITGASSGIGEHLAYEYARRGACLALCARREKSLEEVADTAREIGSPDVITIRADVSKVDDCRSLVEETMNH  122 (248)
Q Consensus        47 ~k~~l----VtGg~~gIG~aia~~l~~~G~~V~l~~r~~~~~~~~~~~l~~~~~~~v~~~~~D~~~~~~~~~~~~~~~~~  122 (248)
                      |..+|    |+||++|+|.++++.|...|++|..+.+...+...                                  .+
T Consensus        34 ~~~~~~~~~l~~~~~g~~~~~~~~~~~~g~~v~~~~~~~~~~~~----------------------------------~~   79 (450)
T PRK08261         34 GQPLLDGPVLVGGAGRLAEALAALLAGLGYDVVANNDGGLTWAA----------------------------------GW   79 (450)
T ss_pred             CCCCCCCceEEccCchhHHHHHHHHhhCCCeeeecCcccccccc----------------------------------Cc
Confidence            44555    78888999999999999999999987765431100                                  00


Q ss_pred             cCCccEEEEccccCCcccccccCChHHHHHHHHhhhHHHHHHHHHHhhhhhhcCCeEEEEcCccccccCCCCccchHHHH
Q 044010          123 FGRLDHLVNNAGISSVALFEDIVNITDFKQIMNINFWGSVYTTRFAVPHLRYTKGKIVVLSSAASWLTAPRMSFYNASKA  202 (248)
Q Consensus       123 ~g~id~vv~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~g~iV~isS~~~~~~~~~~~~Y~~sKa  202 (248)
                      ..+++.+++-+...        .+.+++.        +.+...+..++.|. ..|+||+++|.....+   ...|+++|+
T Consensus        80 ~~~~~~~~~d~~~~--------~~~~~l~--------~~~~~~~~~l~~l~-~~griv~i~s~~~~~~---~~~~~~aka  139 (450)
T PRK08261         80 GDRFGALVFDATGI--------TDPADLK--------ALYEFFHPVLRSLA-PCGRVVVLGRPPEAAA---DPAAAAAQR  139 (450)
T ss_pred             CCcccEEEEECCCC--------CCHHHHH--------HHHHHHHHHHHhcc-CCCEEEEEccccccCC---chHHHHHHH
Confidence            01334333211110        1112222        33455666677765 4689999998776533   346999999


Q ss_pred             HHHHHHHHHHHHhCCCeEEEEEecCcc
Q 044010          203 ALVLFFETLRVELGSDVGVTIVTPGFI  229 (248)
Q Consensus       203 al~~l~~~la~~~~~~i~v~~v~pg~v  229 (248)
                      ++.++++++++|+..++++|+|.|++.
T Consensus       140 al~gl~rsla~E~~~gi~v~~i~~~~~  166 (450)
T PRK08261        140 ALEGFTRSLGKELRRGATAQLVYVAPG  166 (450)
T ss_pred             HHHHHHHHHHHHhhcCCEEEEEecCCC
Confidence            999999999999944599999999873

>KOG0747 consensus Putative NAD+-dependent epimerases [Carbohydrate transport and metabolism]

Probab=98.73  E-value=1.1e-07  Score=79.42  Aligned_cols=156  Identities=18%  Similarity=0.157  Sum_probs=111.4

Q ss_pred             CCEEEEcCCCChHHHHHHHHHHHc--CCeEEEEeCCc-chHHHHHHHHHhhCCCcEEEEEccCCCHHHHHHHHHHHHhHc
Q 044010           47 GKVVIITGASSGIGEHLAYEYARR--GACLALCARRE-KSLEEVADTAREIGSPDVITIRADVSKVDDCRSLVEETMNHF  123 (248)
Q Consensus        47 ~k~~lVtGg~~gIG~aia~~l~~~--G~~V~l~~r~~-~~~~~~~~~l~~~~~~~v~~~~~D~~~~~~~~~~~~~~~~~~  123 (248)
                      .|.++||||.|.||...+..+...  .++.+..+.=. -...+..++.+..  ...+++..|+.+...+..++.+     
T Consensus         6 ~~~vlItgg~gfi~Sn~~~~~~~~~p~~~~v~idkL~~~s~~~~l~~~~n~--p~ykfv~~di~~~~~~~~~~~~-----   78 (331)
T KOG0747|consen    6 EKNVLITGGAGFIGSNFINYLVDKYPDYKFVNLDKLDYCSNLKNLEPVRNS--PNYKFVEGDIADADLVLYLFET-----   78 (331)
T ss_pred             cceEEEecCcCcchhhhhhhcccCCCCCcEEEEeecccccccchhhhhccC--CCceEeeccccchHHHHhhhcc-----
Confidence            389999999999999999999876  34555544411 1112233333333  3678999999999888777764     


Q ss_pred             CCccEEEEccccCCcccccccCChHHHHHHHHhhhHHHHHHHHHHhhhhhhcCCeEEEEcCccccccC------------
Q 044010          124 GRLDHLVNNAGISSVALFEDIVNITDFKQIMNINFWGSVYTTRFAVPHLRYTKGKIVVLSSAASWLTA------------  191 (248)
Q Consensus       124 g~id~vv~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~g~iV~isS~~~~~~~------------  191 (248)
                      .++|.++|-|+.......     --+.-+....|++++..|++......  +--++|.+||...+...            
T Consensus        79 ~~id~vihfaa~t~vd~s-----~~~~~~~~~nnil~t~~Lle~~~~sg--~i~~fvhvSTdeVYGds~~~~~~~E~s~~  151 (331)
T KOG0747|consen   79 EEIDTVIHFAAQTHVDRS-----FGDSFEFTKNNILSTHVLLEAVRVSG--NIRRFVHVSTDEVYGDSDEDAVVGEASLL  151 (331)
T ss_pred             CchhhhhhhHhhhhhhhh-----cCchHHHhcCCchhhhhHHHHHHhcc--CeeEEEEecccceecCccccccccccccC
Confidence            489999999986643321     12234556779999999999876543  12479999998766432            


Q ss_pred             CCCccchHHHHHHHHHHHHHHHHhC
Q 044010          192 PRMSFYNASKAALVLFFETLRVELG  216 (248)
Q Consensus       192 ~~~~~Y~~sKaal~~l~~~la~~~~  216 (248)
                      .+-.+|+++|+|.+.+.+++.+.|+
T Consensus       152 nPtnpyAasKaAaE~~v~Sy~~sy~  176 (331)
T KOG0747|consen  152 NPTNPYAASKAAAEMLVRSYGRSYG  176 (331)
T ss_pred             CCCCchHHHHHHHHHHHHHHhhccC
Confidence            1235799999999999999999996

>COG1090 Predicted nucleoside-diphosphate sugar epimerase [General function prediction only]

Probab=98.70  E-value=2e-07  Score=77.88  Aligned_cols=154  Identities=18%  Similarity=0.225  Sum_probs=90.3

Q ss_pred             EEEcCCCChHHHHHHHHHHHcCCeEEEEeCCcchHHHHHHHHHhhCCCcEEEEEccCCCHHHHHHHHHHHHhHcCCccEE
Q 044010           50 VIITGASSGIGEHLAYEYARRGACLALCARREKSLEEVADTAREIGSPDVITIRADVSKVDDCRSLVEETMNHFGRLDHL  129 (248)
Q Consensus        50 ~lVtGg~~gIG~aia~~l~~~G~~V~l~~r~~~~~~~~~~~l~~~~~~~v~~~~~D~~~~~~~~~~~~~~~~~~g~id~v  129 (248)
                      ++||||||-||++++.+|.+.|++|.++.|++.+.+....              ..+...+.+.+..+      .++|++
T Consensus         1 IliTGgTGlIG~~L~~~L~~~gh~v~iltR~~~~~~~~~~--------------~~v~~~~~~~~~~~------~~~Dav   60 (297)
T COG1090           1 ILITGGTGLIGRALTARLRKGGHQVTILTRRPPKASQNLH--------------PNVTLWEGLADALT------LGIDAV   60 (297)
T ss_pred             CeEeccccchhHHHHHHHHhCCCeEEEEEcCCcchhhhcC--------------ccccccchhhhccc------CCCCEE
Confidence            5899999999999999999999999999999875443210              01111222222211      169999


Q ss_pred             EEccccCCccc-ccccCChHHHHHHHHhhhHHHHHHHHHHhhhhh--hcCCeEEEEcCccccccCCCCccchHH----HH
Q 044010          130 VNNAGISSVAL-FEDIVNITDFKQIMNINFWGSVYTTRFAVPHLR--YTKGKIVVLSSAASWLTAPRMSFYNAS----KA  202 (248)
Q Consensus       130 v~~ag~~~~~~-~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~--~~~g~iV~isS~~~~~~~~~~~~Y~~s----Ka  202 (248)
                      ||-||..-... +.    .+.=++..+    |-+..++.+.....  +++.++..-+|..|+++...-..|--.    .-
T Consensus        61 INLAG~~I~~rrWt----~~~K~~i~~----SRi~~T~~L~e~I~~~~~~P~~~isaSAvGyYG~~~~~~~tE~~~~g~~  132 (297)
T COG1090          61 INLAGEPIAERRWT----EKQKEEIRQ----SRINTTEKLVELIAASETKPKVLISASAVGYYGHSGDRVVTEESPPGDD  132 (297)
T ss_pred             EECCCCccccccCC----HHHHHHHHH----HHhHHHHHHHHHHHhccCCCcEEEecceEEEecCCCceeeecCCCCCCC
Confidence            99999654322 32    233333444    34444555555544  334455555666677775544333222    22


Q ss_pred             HHHHHHHHHHHHh---CC-CeEEEEEecCcccc
Q 044010          203 ALVLFFETLRVEL---GS-DVGVTIVTPGFIES  231 (248)
Q Consensus       203 al~~l~~~la~~~---~~-~i~v~~v~pg~v~T  231 (248)
                      .+..+++.|=.+.   .. ++||..+.-|.|-.
T Consensus       133 Fla~lc~~WE~~a~~a~~~gtRvvllRtGvVLs  165 (297)
T COG1090         133 FLAQLCQDWEEEALQAQQLGTRVVLLRTGVVLS  165 (297)
T ss_pred             hHHHHHHHHHHHHhhhhhcCceEEEEEEEEEec
Confidence            3344444443332   22 58999888888754

>COG4982 3-oxoacyl-[acyl-carrier protein]

Probab=98.62  E-value=4.1e-06  Score=76.82  Aligned_cols=185  Identities=17%  Similarity=0.122  Sum_probs=115.6

Q ss_pred             ccCCCCCEEEEcCCC-ChHHHHHHHHHHHcCCeEEEEeCCcch-HHHHHHHH-Hhh--CCCcEEEEEccCCCHHHHHHHH
Q 044010           42 SEDVSGKVVIITGAS-SGIGEHLAYEYARRGACLALCARREKS-LEEVADTA-REI--GSPDVITIRADVSKVDDCRSLV  116 (248)
Q Consensus        42 ~~~~~~k~~lVtGg~-~gIG~aia~~l~~~G~~V~l~~r~~~~-~~~~~~~l-~~~--~~~~v~~~~~D~~~~~~~~~~~  116 (248)
                      .....++++||||++ +.||.+++.+|++.|++|+++..+-.+ ..+..+.+ ..+  ++...-++..+..+..+++.++
T Consensus       391 ~~~y~d~valVTGA~~gSIaa~Vv~~LL~gGAtVI~TTS~~s~~r~efyr~LYa~~a~~ga~LwvVpaN~~SysDVdAlI  470 (866)
T COG4982         391 GGTYGDKVALVTGASKGSIAAAVVARLLAGGATVIATTSRLSEERTEFYRSLYARHARYGAALWVVPANMGSYSDVDALI  470 (866)
T ss_pred             CCCcccceEEEecCCCcchHHHHHHHHHhCCcEEEEEcccccHHHHHHHHHHHHhhCCCCceEEEEeccccchhhHHHHH
Confidence            356789999999998 789999999999999999888775432 22333333 222  2445678899999999999999


Q ss_pred             HHHHhHcC--------------CccEEEEccccCCcccccccCChHHHHHHHHhhhHHHHHHHHHHhhhhhhcC----Ce
Q 044010          117 EETMNHFG--------------RLDHLVNNAGISSVALFEDIVNITDFKQIMNINFWGSVYTTRFAVPHLRYTK----GK  178 (248)
Q Consensus       117 ~~~~~~~g--------------~id~vv~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~----g~  178 (248)
                      +.+.++..              .++.++--|++...+.+.+--+..  +..+.+-+.+...++--+.++-.+++    -+
T Consensus       471 ewIg~eq~~t~g~~s~~~k~a~~ptll~PFAAp~v~G~l~~agsra--E~~~rilLw~V~Rliggl~~~~s~r~v~~R~h  548 (866)
T COG4982         471 EWIGDEQTETVGPQSIHIKLAWTPTLLFPFAAPRVSGELADAGSRA--EFAMRILLWNVLRLIGGLKKQGSSRGVDTRLH  548 (866)
T ss_pred             HHhccccccccCCcceecccccCcceeeecccCCccCccccCCchH--HHHHHHHHHHHHHHHHHhhhhccccCcccceE
Confidence            99987542              368888777766555443321212  22333333333333333333322221    24


Q ss_pred             EEEEcCcc-ccccCCCCccchHHHHHHHHHHHHHHHHh--CCCeEEEEEecCccc
Q 044010          179 IVVLSSAA-SWLTAPRMSFYNASKAALVLFFETLRVEL--GSDVGVTIVTPGFIE  230 (248)
Q Consensus       179 iV~isS~~-~~~~~~~~~~Y~~sKaal~~l~~~la~~~--~~~i~v~~v~pg~v~  230 (248)
                      +|.-.|-. |..+  +-.+|+-||++++.+..-|..|-  +..+.+..-.-|+++
T Consensus       549 VVLPgSPNrG~FG--gDGaYgEsK~aldav~~RW~sEs~Wa~~vsl~~A~IGWtr  601 (866)
T COG4982         549 VVLPGSPNRGMFG--GDGAYGESKLALDAVVNRWHSESSWAARVSLAHALIGWTR  601 (866)
T ss_pred             EEecCCCCCCccC--CCcchhhHHHHHHHHHHHhhccchhhHHHHHhhhheeeec
Confidence            55554422 3333  45689999999999977666654  222444444445553

>TIGR00521 coaBC_dfp phosphopantothenoylcysteine decarboxylase/phosphopantothenate--cysteine ligase, prokaryotic

Probab=98.58  E-value=2.8e-07  Score=82.12  Aligned_cols=113  Identities=22%  Similarity=0.247  Sum_probs=76.8

Q ss_pred             cCCCCCEEEEcCC---------------CCh-HHHHHHHHHHHcCCeEEEEeCCcchHHHHHHHHHhhCCCcEEEEEccC
Q 044010           43 EDVSGKVVIITGA---------------SSG-IGEHLAYEYARRGACLALCARREKSLEEVADTAREIGSPDVITIRADV  106 (248)
Q Consensus        43 ~~~~~k~~lVtGg---------------~~g-IG~aia~~l~~~G~~V~l~~r~~~~~~~~~~~l~~~~~~~v~~~~~D~  106 (248)
                      .+++||+++||||               |+| +|.++|+.|.++|++|++++++....          ....  ...+|+
T Consensus       181 ~~~~~~~vlit~g~t~E~iD~VR~itN~SSG~~g~~~a~~~~~~Ga~V~~~~g~~~~~----------~~~~--~~~~~v  248 (390)
T TIGR00521       181 EDLEGKRVLITAGPTREPIDPVRFISNLSSGKMGLALAEAAYKRGADVTLITGPVSLL----------TPPG--VKSIKV  248 (390)
T ss_pred             cccCCceEEEecCCccCCCCceeeecCCCcchHHHHHHHHHHHCCCEEEEeCCCCccC----------CCCC--cEEEEe
Confidence            3689999999999               556 99999999999999999988765321          1112  256899


Q ss_pred             CCHHHH-HHHHHHHHhHcCCccEEEEccccCCcccccccC-ChHHHHHHHHhhhHHHHHHHHHHhh
Q 044010          107 SKVDDC-RSLVEETMNHFGRLDHLVNNAGISSVALFEDIV-NITDFKQIMNINFWGSVYTTRFAVP  170 (248)
Q Consensus       107 ~~~~~~-~~~~~~~~~~~g~id~vv~~ag~~~~~~~~~~~-~~~~~~~~~~~n~~~~~~l~~~~~~  170 (248)
                      ++.+++ +.+.++   ..+++|++|+|||+....+..... ......+.+..|+...-.+++.+..
T Consensus       249 ~~~~~~~~~~~~~---~~~~~D~~i~~Aavsd~~~~~~~~~Ki~~~~~~~~l~L~~~pdil~~l~~  311 (390)
T TIGR00521       249 STAEEMLEAALNE---LAKDFDIFISAAAVADFKPKTVFEGKIKKQGEELSLKLVKNPDIIAEVRK  311 (390)
T ss_pred             ccHHHHHHHHHHh---hcccCCEEEEccccccccccccccccccccCCceeEEEEeCcHHHHHHHh
Confidence            999888 555544   346899999999987654432110 0011123455666666666666553

This model represents a bifunctional enzyme that catalyzes the second and third steps (cysteine ligation, EC 6.3.2.5, and decarboxylation, EC 4.1.1.36) in the biosynthesis of coenzyme A (CoA) from pantothenate in bacteria. In early descriptions of this flavoprotein, a ts mutation in one region of the protein appeared to cause a defect in DNA metaobolism rather than an increased need for the pantothenate precursor beta-alanine. This protein was then called dfp, for DNA/pantothenate metabolism flavoprotein. The authors responsible for detecting phosphopantothenate--cysteine ligase activity suggest renaming this bifunctional protein coaBC for its role in CoA biosynthesis. This enzyme contains the FMN cofactor, but no FAD or pyruvoyl group. The amino-terminal region contains the phosphopantothenoylcysteine decarboxylase activity.

>PRK06732 phosphopantothenate--cysteine ligase; Validated

Probab=98.58  E-value=3.8e-07  Score=75.77  Aligned_cols=99  Identities=17%  Similarity=0.220  Sum_probs=65.0

Q ss_pred             EEEEcCCCC-hHHHHHHHHHHHcCCeEEEEeCCcchHHHHHHHHHhhCCCcEEEEEccCCCHHHHHHHHHHHHhHcCCcc
Q 044010           49 VVIITGASS-GIGEHLAYEYARRGACLALCARREKSLEEVADTAREIGSPDVITIRADVSKVDDCRSLVEETMNHFGRLD  127 (248)
Q Consensus        49 ~~lVtGg~~-gIG~aia~~l~~~G~~V~l~~r~~~~~~~~~~~l~~~~~~~v~~~~~D~~~~~~~~~~~~~~~~~~g~id  127 (248)
                      +=.||+.++ ++|.++|++|+++|++|++++|+...        .......+.++.++     +.+++.+.+.+.++++|
T Consensus        17 VR~itN~SSG~iG~aLA~~L~~~G~~V~li~r~~~~--------~~~~~~~v~~i~v~-----s~~~m~~~l~~~~~~~D   83 (229)
T PRK06732         17 VRGITNHSTGQLGKIIAETFLAAGHEVTLVTTKTAV--------KPEPHPNLSIIEIE-----NVDDLLETLEPLVKDHD   83 (229)
T ss_pred             ceeecCccchHHHHHHHHHHHhCCCEEEEEECcccc--------cCCCCCCeEEEEEe-----cHHHHHHHHHHHhcCCC
Confidence            556776665 59999999999999999999876421        00011245555532     33334444444556899


Q ss_pred             EEEEccccCCcccccccCChHHHHHHHHhhhHHH
Q 044010          128 HLVNNAGISSVALFEDIVNITDFKQIMNINFWGS  161 (248)
Q Consensus       128 ~vv~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~  161 (248)
                      ++||+||+....+... .+.+++.+.+++|....
T Consensus        84 ivIh~AAvsd~~~~~~-~~~~~~~~~~~v~~~~~  116 (229)
T PRK06732         84 VLIHSMAVSDYTPVYM-TDLEEVSASDNLNEFLT  116 (229)
T ss_pred             EEEeCCccCCceehhh-hhhhhhhhhhhhhhhhc
Confidence            9999999876444333 45688888888765553

>PF05368 NmrA: NmrA-like family; InterPro: IPR008030 NmrA is a negative transcriptional regulator involved in the post-translational modification of the transcription factor AreA

Probab=98.57  E-value=2e-06  Score=71.25  Aligned_cols=146  Identities=16%  Similarity=0.192  Sum_probs=90.5

Q ss_pred             EEEcCCCChHHHHHHHHHHHcCCeEEEEeCCcchHHHHHHHHHhhCCCcEEEEEccCCCHHHHHHHHHHHHhHcCCccEE
Q 044010           50 VIITGASSGIGEHLAYEYARRGACLALCARREKSLEEVADTAREIGSPDVITIRADVSKVDDCRSLVEETMNHFGRLDHL  129 (248)
Q Consensus        50 ~lVtGg~~gIG~aia~~l~~~G~~V~l~~r~~~~~~~~~~~l~~~~~~~v~~~~~D~~~~~~~~~~~~~~~~~~g~id~v  129 (248)
                      ++|+|++|.+|+++++.|++.|++|.+..|+..  .+..++++..+   ++++.+|+.|.+++.++++       ++|.+
T Consensus         1 I~V~GatG~~G~~v~~~L~~~~~~V~~l~R~~~--~~~~~~l~~~g---~~vv~~d~~~~~~l~~al~-------g~d~v   68 (233)
T PF05368_consen    1 ILVTGATGNQGRSVVRALLSAGFSVRALVRDPS--SDRAQQLQALG---AEVVEADYDDPESLVAALK-------GVDAV   68 (233)
T ss_dssp             EEEETTTSHHHHHHHHHHHHTTGCEEEEESSSH--HHHHHHHHHTT---TEEEES-TT-HHHHHHHHT-------TCSEE
T ss_pred             CEEECCccHHHHHHHHHHHhCCCCcEEEEeccc--hhhhhhhhccc---ceEeecccCCHHHHHHHHc-------CCceE
Confidence            689999999999999999999999999999873  23444555543   4677999999999988886       79999


Q ss_pred             EEccccCCcccccccCChHHHHHHHHhhhHHHHHHHHHHhhhhhhcCCeEEEEcCccccccCC--C--CccchHHHHHHH
Q 044010          130 VNNAGISSVALFEDIVNITDFKQIMNINFWGSVYTTRFAVPHLRYTKGKIVVLSSAASWLTAP--R--MSFYNASKAALV  205 (248)
Q Consensus       130 v~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~g~iV~isS~~~~~~~~--~--~~~Y~~sKaal~  205 (248)
                      +++.+...+.      ..+.           ...+++++...   .-.++| .||........  .  ....-..|..++
T Consensus        69 ~~~~~~~~~~------~~~~-----------~~~li~Aa~~a---gVk~~v-~ss~~~~~~~~~~~~p~~~~~~~k~~ie  127 (233)
T PF05368_consen   69 FSVTPPSHPS------ELEQ-----------QKNLIDAAKAA---GVKHFV-PSSFGADYDESSGSEPEIPHFDQKAEIE  127 (233)
T ss_dssp             EEESSCSCCC------HHHH-----------HHHHHHHHHHH---T-SEEE-ESEESSGTTTTTTSTTHHHHHHHHHHHH
T ss_pred             EeecCcchhh------hhhh-----------hhhHHHhhhcc---ccceEE-EEEecccccccccccccchhhhhhhhhh
Confidence            9888755311      1111           12233333211   124676 45544433211  1  112334677666


Q ss_pred             HHHHHHHHHhCCCeEEEEEecCccccCcc
Q 044010          206 LFFETLRVELGSDVGVTIVTPGFIESELT  234 (248)
Q Consensus       206 ~l~~~la~~~~~~i~v~~v~pg~v~T~~~  234 (248)
                      ...+..      ++....|.||+......
T Consensus       128 ~~l~~~------~i~~t~i~~g~f~e~~~  150 (233)
T PF05368_consen  128 EYLRES------GIPYTIIRPGFFMENLL  150 (233)
T ss_dssp             HHHHHC------TSEBEEEEE-EEHHHHH
T ss_pred             hhhhhc------cccceeccccchhhhhh
Confidence            555443      46777888887655443

NmrA is part of a system controlling nitrogen metabolite repression in fungi []. This family only contains a few sequences as iteration results in significant matches to other Rossmann fold families.; PDB: 2ZCV_A 2ZCU_A 2R6J_B 3C3X_A 2QZZ_B 2QYS_A 2QX7_A 2QW8_A 2R2G_B 3E5M_B ....

>COG0702 Predicted nucleoside-diphosphate-sugar epimerases [Cell envelope biogenesis, outer membrane / Carbohydrate transport and metabolism]

Probab=98.51  E-value=3e-06  Score=71.49  Aligned_cols=136  Identities=16%  Similarity=0.113  Sum_probs=95.4

Q ss_pred             CEEEEcCCCChHHHHHHHHHHHcCCeEEEEeCCcchHHHHHHHHHhhCCCcEEEEEccCCCHHHHHHHHHHHHhHcCCcc
Q 044010           48 KVVIITGASSGIGEHLAYEYARRGACLALCARREKSLEEVADTAREIGSPDVITIRADVSKVDDCRSLVEETMNHFGRLD  127 (248)
Q Consensus        48 k~~lVtGg~~gIG~aia~~l~~~G~~V~l~~r~~~~~~~~~~~l~~~~~~~v~~~~~D~~~~~~~~~~~~~~~~~~g~id  127 (248)
                      +.+|||||||.+|.+++++|.++|++|.+..|+.++.....        ..+.+...|+++..++...++       ++|
T Consensus         1 ~~ilV~GatG~~G~~~~~~L~~~~~~v~~~~r~~~~~~~~~--------~~v~~~~~d~~~~~~l~~a~~-------G~~   65 (275)
T COG0702           1 MKILVTGATGFVGGAVVRELLARGHEVRAAVRNPEAAAALA--------GGVEVVLGDLRDPKSLVAGAK-------GVD   65 (275)
T ss_pred             CeEEEEecccchHHHHHHHHHhCCCEEEEEEeCHHHHHhhc--------CCcEEEEeccCCHhHHHHHhc-------ccc
Confidence            36899999999999999999999999999999987655543        378899999999999988876       788


Q ss_pred             EEEEccccCCcccccccCChHHHHHHHHhhhHHHHHHHHHHhhhhhhcCCeEEEEcCccccccCCCCccchHHHHHHHHH
Q 044010          128 HLVNNAGISSVALFEDIVNITDFKQIMNINFWGSVYTTRFAVPHLRYTKGKIVVLSSAASWLTAPRMSFYNASKAALVLF  207 (248)
Q Consensus       128 ~vv~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~g~iV~isS~~~~~~~~~~~~Y~~sKaal~~l  207 (248)
                      .+++..+... ... ..   ..      ....+.....+...    ....+++.+|+..+..  .....|..+|...+..
T Consensus        66 ~~~~i~~~~~-~~~-~~---~~------~~~~~~~~~a~~a~----~~~~~~~~~s~~~~~~--~~~~~~~~~~~~~e~~  128 (275)
T COG0702          66 GVLLISGLLD-GSD-AF---RA------VQVTAVVRAAEAAG----AGVKHGVSLSVLGADA--ASPSALARAKAAVEAA  128 (275)
T ss_pred             EEEEEecccc-ccc-ch---hH------HHHHHHHHHHHHhc----CCceEEEEeccCCCCC--CCccHHHHHHHHHHHH
Confidence            8888877654 211 10   11      11122223333322    1223566666655443  3456899999999988


Q ss_pred             HHHHHHHh
Q 044010          208 FETLRVEL  215 (248)
Q Consensus       208 ~~~la~~~  215 (248)
                      .++....+
T Consensus       129 l~~sg~~~  136 (275)
T COG0702         129 LRSSGIPY  136 (275)
T ss_pred             HHhcCCCe
Confidence            77766654

>KOG1221 consensus Acyl-CoA reductase [Lipid transport and metabolism]

Probab=98.46  E-value=2.1e-06  Score=77.39  Aligned_cols=128  Identities=22%  Similarity=0.292  Sum_probs=89.6

Q ss_pred             CCCCCEEEEcCCCChHHHHHHHHHHHc--CC-eEEEEeCCcc---hHH--------HHHHHHHhhCC---CcEEEEEccC
Q 044010           44 DVSGKVVIITGASSGIGEHLAYEYARR--GA-CLALCARREK---SLE--------EVADTAREIGS---PDVITIRADV  106 (248)
Q Consensus        44 ~~~~k~~lVtGg~~gIG~aia~~l~~~--G~-~V~l~~r~~~---~~~--------~~~~~l~~~~~---~~v~~~~~D~  106 (248)
                      -++||+++||||||++|.-+.+.|+..  .. ++.+.-|...   ..+        ++.+++++..+   .++..+.+|+
T Consensus         9 f~~~k~i~vTG~tGFlgKVliEklLr~~p~v~~IYlLiR~k~g~~~~~Rl~~~~~~~lF~~l~~~~p~~l~Kv~pi~GDi   88 (467)
T KOG1221|consen    9 FYKNKTIFVTGATGFLGKVLIEKLLRTTPDVKRIYLLIRAKKGKAAQERLRTELKDPLFEVLKEKKPEALEKVVPIAGDI   88 (467)
T ss_pred             HhCCCeEEEEcccchhHHHHHHHHHhcCcCcceEEEEEecCCCCCHHHHHHHHHhhhHHHHHHhhCccceecceeccccc
Confidence            468999999999999999999999975  22 6777766432   111        22223333322   3677888999


Q ss_pred             CCH------HHHHHHHHHHHhHcCCccEEEEccccCCcccccccCChHHHHHHHHhhhHHHHHHHHHHhhhhhhcCCeEE
Q 044010          107 SKV------DDCRSLVEETMNHFGRLDHLVNNAGISSVALFEDIVNITDFKQIMNINFWGSVYTTRFAVPHLRYTKGKIV  180 (248)
Q Consensus       107 ~~~------~~~~~~~~~~~~~~g~id~vv~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~g~iV  180 (248)
                      ++.      ++...+.       ..+|++||.|+....       + |.++..+.+|..|+.++++.+....+  -..+|
T Consensus        89 ~~~~LGis~~D~~~l~-------~eV~ivih~AAtvrF-------d-e~l~~al~iNt~Gt~~~l~lak~~~~--l~~~v  151 (467)
T KOG1221|consen   89 SEPDLGISESDLRTLA-------DEVNIVIHSAATVRF-------D-EPLDVALGINTRGTRNVLQLAKEMVK--LKALV  151 (467)
T ss_pred             cCcccCCChHHHHHHH-------hcCCEEEEeeeeecc-------c-hhhhhhhhhhhHhHHHHHHHHHHhhh--hheEE
Confidence            885      2232222       279999999996542       2 67788999999999999998876532  24788


Q ss_pred             EEcCcccc
Q 044010          181 VLSSAASW  188 (248)
Q Consensus       181 ~isS~~~~  188 (248)
                      .+|+..+.
T Consensus       152 hVSTAy~n  159 (467)
T KOG1221|consen  152 HVSTAYSN  159 (467)
T ss_pred             Eeehhhee
Confidence            88887765

>KOG2865 consensus NADH:ubiquinone oxidoreductase, NDUFA9/39kDa subunit [Energy production and conversion]

Probab=98.45  E-value=2.8e-06  Score=71.37  Aligned_cols=123  Identities=17%  Similarity=0.206  Sum_probs=88.8

Q ss_pred             CCCCCEEEEcCCCChHHHHHHHHHHHcCCeEEEEeCCcchHHHHHHHHHhhCC-CcEEEEEccCCCHHHHHHHHHHHHhH
Q 044010           44 DVSGKVVIITGASSGIGEHLAYEYARRGACLALCARREKSLEEVADTAREIGS-PDVITIRADVSKVDDCRSLVEETMNH  122 (248)
Q Consensus        44 ~~~~k~~lVtGg~~gIG~aia~~l~~~G~~V~l~~r~~~~~~~~~~~l~~~~~-~~v~~~~~D~~~~~~~~~~~~~~~~~  122 (248)
                      .++|-++-|.|+||.+|+-++.+|++.|..|++=.|..+-   ...+++--++ .++.+...|+.|++|+.++++     
T Consensus        58 S~sGiVaTVFGAtGFlGryvvnklak~GSQviiPyR~d~~---~~r~lkvmGdLGQvl~~~fd~~DedSIr~vvk-----  129 (391)
T KOG2865|consen   58 SVSGIVATVFGATGFLGRYVVNKLAKMGSQVIIPYRGDEY---DPRHLKVMGDLGQVLFMKFDLRDEDSIRAVVK-----  129 (391)
T ss_pred             cccceEEEEecccccccHHHHHHHhhcCCeEEEeccCCcc---chhheeecccccceeeeccCCCCHHHHHHHHH-----
Confidence            4678899999999999999999999999999999886542   2222332221 389999999999999999987     


Q ss_pred             cCCccEEEEccccCCcccccccCChHHHHHHHHhhhHHHHHHHHHHhhhhhhcCCeEEEEcCcccc
Q 044010          123 FGRLDHLVNNAGISSVALFEDIVNITDFKQIMNINFWGSVYTTRFAVPHLRYTKGKIVVLSSAASW  188 (248)
Q Consensus       123 ~g~id~vv~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~g~iV~isS~~~~  188 (248)
                        .-++|||..|.-.+....+   -+      ++|+.++-.+.+.+...--   -++|.+|+..+.
T Consensus       130 --~sNVVINLIGrd~eTknf~---f~------Dvn~~~aerlAricke~GV---erfIhvS~Lgan  181 (391)
T KOG2865|consen  130 --HSNVVINLIGRDYETKNFS---FE------DVNVHIAERLARICKEAGV---ERFIHVSCLGAN  181 (391)
T ss_pred             --hCcEEEEeeccccccCCcc---cc------cccchHHHHHHHHHHhhCh---hheeehhhcccc
Confidence              5799999999654433222   12      2577777666666532211   378888876654

>COG1748 LYS9 Saccharopine dehydrogenase and related proteins [Amino acid transport and metabolism]

Probab=98.37  E-value=1.7e-06  Score=76.58  Aligned_cols=78  Identities=22%  Similarity=0.382  Sum_probs=66.2

Q ss_pred             CEEEEcCCCChHHHHHHHHHHHcC-CeEEEEeCCcchHHHHHHHHHhhCCCcEEEEEccCCCHHHHHHHHHHHHhHcCCc
Q 044010           48 KVVIITGASSGIGEHLAYEYARRG-ACLALCARREKSLEEVADTAREIGSPDVITIRADVSKVDDCRSLVEETMNHFGRL  126 (248)
Q Consensus        48 k~~lVtGg~~gIG~aia~~l~~~G-~~V~l~~r~~~~~~~~~~~l~~~~~~~v~~~~~D~~~~~~~~~~~~~~~~~~g~i  126 (248)
                      +.+||.|+ |++|+.+|..|+++| .+|.+.+|+.++++++.+...    .++...++|+.|.+++.++++       +.
T Consensus         2 ~~ilviGa-G~Vg~~va~~la~~~d~~V~iAdRs~~~~~~i~~~~~----~~v~~~~vD~~d~~al~~li~-------~~   69 (389)
T COG1748           2 MKILVIGA-GGVGSVVAHKLAQNGDGEVTIADRSKEKCARIAELIG----GKVEALQVDAADVDALVALIK-------DF   69 (389)
T ss_pred             CcEEEECC-chhHHHHHHHHHhCCCceEEEEeCCHHHHHHHHhhcc----ccceeEEecccChHHHHHHHh-------cC
Confidence            56888988 999999999999999 799999999888777655432    378999999999999988887       45


Q ss_pred             cEEEEccccCC
Q 044010          127 DHLVNNAGISS  137 (248)
Q Consensus       127 d~vv~~ag~~~  137 (248)
                      |++||+++..-
T Consensus        70 d~VIn~~p~~~   80 (389)
T COG1748          70 DLVINAAPPFV   80 (389)
T ss_pred             CEEEEeCCchh
Confidence            99999987653

>PRK14106 murD UDP-N-acetylmuramoyl-L-alanyl-D-glutamate synthetase; Provisional

Probab=98.30  E-value=3.7e-06  Score=76.65  Aligned_cols=78  Identities=23%  Similarity=0.369  Sum_probs=59.6

Q ss_pred             CCCCCEEEEcCCCChHHHHHHHHHHHcCCeEEEEeCCc-chHHHHHHHHHhhCCCcEEEEEccCCCHHHHHHHHHHHHhH
Q 044010           44 DVSGKVVIITGASSGIGEHLAYEYARRGACLALCARRE-KSLEEVADTAREIGSPDVITIRADVSKVDDCRSLVEETMNH  122 (248)
Q Consensus        44 ~~~~k~~lVtGg~~gIG~aia~~l~~~G~~V~l~~r~~-~~~~~~~~~l~~~~~~~v~~~~~D~~~~~~~~~~~~~~~~~  122 (248)
                      ++++|+++|+|+++ +|.++|+.|+++|++|.+.+++. +..++..+++...   .+.++..|..+            +.
T Consensus         2 ~~~~k~v~iiG~g~-~G~~~A~~l~~~G~~V~~~d~~~~~~~~~~~~~l~~~---~~~~~~~~~~~------------~~   65 (450)
T PRK14106          2 ELKGKKVLVVGAGV-SGLALAKFLKKLGAKVILTDEKEEDQLKEALEELGEL---GIELVLGEYPE------------EF   65 (450)
T ss_pred             CcCCCEEEEECCCH-HHHHHHHHHHHCCCEEEEEeCCchHHHHHHHHHHHhc---CCEEEeCCcch------------hH
Confidence            68899999999877 99999999999999999999975 3444444445433   34567777765            12


Q ss_pred             cCCccEEEEccccCC
Q 044010          123 FGRLDHLVNNAGISS  137 (248)
Q Consensus       123 ~g~id~vv~~ag~~~  137 (248)
                      .+.+|++|+++|...
T Consensus        66 ~~~~d~vv~~~g~~~   80 (450)
T PRK14106         66 LEGVDLVVVSPGVPL   80 (450)
T ss_pred             hhcCCEEEECCCCCC
Confidence            357999999999754

>PRK09620 hypothetical protein; Provisional

Probab=98.29  E-value=1.4e-06  Score=72.27  Aligned_cols=85  Identities=19%  Similarity=0.245  Sum_probs=53.1

Q ss_pred             CCCCEEEEcCCC----------------ChHHHHHHHHHHHcCCeEEEEeCCcchHHHHHHHHHhhCCCcEEEEEccCCC
Q 044010           45 VSGKVVIITGAS----------------SGIGEHLAYEYARRGACLALCARREKSLEEVADTAREIGSPDVITIRADVSK  108 (248)
Q Consensus        45 ~~~k~~lVtGg~----------------~gIG~aia~~l~~~G~~V~l~~r~~~~~~~~~~~l~~~~~~~v~~~~~D~~~  108 (248)
                      ++||++|||+|.                |.+|.++|+.|+++|++|+++++.......   ...  ....+..+..|.  
T Consensus         1 l~gk~vlITaG~T~E~iD~VR~itN~SSGfiGs~LA~~L~~~Ga~V~li~g~~~~~~~---~~~--~~~~~~~V~s~~--   73 (229)
T PRK09620          1 MKGKKVLITSGGCLEKWDQVRGHTNMAKGTIGRIIAEELISKGAHVIYLHGYFAEKPN---DIN--NQLELHPFEGII--   73 (229)
T ss_pred             CCCCEEEEeCCCccCCcCCeeEecCCCcCHHHHHHHHHHHHCCCeEEEEeCCCcCCCc---ccC--CceeEEEEecHH--
Confidence            579999999996                999999999999999999988864321100   000  011223333322  


Q ss_pred             HHHHHHHHHHHHhHcCCccEEEEccccCCcc
Q 044010          109 VDDCRSLVEETMNHFGRLDHLVNNAGISSVA  139 (248)
Q Consensus       109 ~~~~~~~~~~~~~~~g~id~vv~~ag~~~~~  139 (248)
                        ++.+.+.++.++ .++|++||+|++....
T Consensus        74 --d~~~~l~~~~~~-~~~D~VIH~AAvsD~~  101 (229)
T PRK09620         74 --DLQDKMKSIITH-EKVDAVIMAAAGSDWV  101 (229)
T ss_pred             --HHHHHHHHHhcc-cCCCEEEECcccccee
Confidence              222233322221 2689999999987544

>PF01488 Shikimate_DH: Shikimate / quinate 5-dehydrogenase; InterPro: IPR006151 This entry represents a domain found in shikimate and quinate dehydrogenases, as well as glutamyl-tRNA reductases

Probab=98.28  E-value=9e-06  Score=61.91  Aligned_cols=80  Identities=23%  Similarity=0.323  Sum_probs=60.0

Q ss_pred             cCCCCCEEEEcCCCChHHHHHHHHHHHcCC-eEEEEeCCcchHHHHHHHHHhhCCCcEEEEEccCCCHHHHHHHHHHHHh
Q 044010           43 EDVSGKVVIITGASSGIGEHLAYEYARRGA-CLALCARREKSLEEVADTAREIGSPDVITIRADVSKVDDCRSLVEETMN  121 (248)
Q Consensus        43 ~~~~~k~~lVtGg~~gIG~aia~~l~~~G~-~V~l~~r~~~~~~~~~~~l~~~~~~~v~~~~~D~~~~~~~~~~~~~~~~  121 (248)
                      .++++|+++|.|+ ||.|++++..|++.|+ +|.++.|+.+++++..+++   ++..+..+..  .+   +.+..     
T Consensus         8 ~~l~~~~vlviGa-Gg~ar~v~~~L~~~g~~~i~i~nRt~~ra~~l~~~~---~~~~~~~~~~--~~---~~~~~-----   73 (135)
T PF01488_consen    8 GDLKGKRVLVIGA-GGAARAVAAALAALGAKEITIVNRTPERAEALAEEF---GGVNIEAIPL--ED---LEEAL-----   73 (135)
T ss_dssp             STGTTSEEEEESS-SHHHHHHHHHHHHTTSSEEEEEESSHHHHHHHHHHH---TGCSEEEEEG--GG---HCHHH-----
T ss_pred             CCcCCCEEEEECC-HHHHHHHHHHHHHcCCCEEEEEECCHHHHHHHHHHc---CccccceeeH--HH---HHHHH-----
Confidence            3899999999997 9999999999999999 4999999999888888777   2223444433  22   22222     


Q ss_pred             HcCCccEEEEccccCCc
Q 044010          122 HFGRLDHLVNNAGISSV  138 (248)
Q Consensus       122 ~~g~id~vv~~ag~~~~  138 (248)
                        .+.|++|++.+...+
T Consensus        74 --~~~DivI~aT~~~~~   88 (135)
T PF01488_consen   74 --QEADIVINATPSGMP   88 (135)
T ss_dssp             --HTESEEEE-SSTTST
T ss_pred             --hhCCeEEEecCCCCc
Confidence              279999999886543

Shikimate 5-dehydrogenase (1.1.1.25 from EC) catalyses the conversion of shikimate to 5-dehydroshikimate [, ]. This reaction is part of the shikimate pathway which is involved in the biosynthesis of aromatic amino acids []. Quinate 5-dehydrogenase catalyses the conversion of quinate to 5-dehydroquinate. This reaction is part of the quinate pathway where quinic acid is exploited as a source of carbon in prokaryotes and microbial eukaryotes. Both the shikimate and quinate pathways share two common pathway metabolites, 3-dehydroquinate and dehydroshikimate. Glutamyl-tRNA reductase (1.2.1.70 from EC) catalyzes the first step of tetrapyrrole biosynthesis in plants, archaea and most bacteria. The dimeric enzyme has an unusual V-shaped architecture where each monomer consists of three domains linked by a long 'spinal' alpha-helix. The central catalytic domain specifically recognises the glutamate moiety of the substrate []. ; PDB: 2EV9_B 2CY0_B 1WXD_A 2D5C_A 1NVT_B 2EGG_A 3PWZ_A 3DOO_A 3DON_A 3FBT_C ....

>KOG2733 consensus Uncharacterized membrane protein [Function unknown]

Probab=98.28  E-value=1.4e-05  Score=69.07  Aligned_cols=82  Identities=27%  Similarity=0.324  Sum_probs=71.5

Q ss_pred             EEEEcCCCChHHHHHHHHHHH----cCCeEEEEeCCcchHHHHHHHHHhhCCC---cEEEEEccCCCHHHHHHHHHHHHh
Q 044010           49 VVIITGASSGIGEHLAYEYAR----RGACLALCARREKSLEEVADTAREIGSP---DVITIRADVSKVDDCRSLVEETMN  121 (248)
Q Consensus        49 ~~lVtGg~~gIG~aia~~l~~----~G~~V~l~~r~~~~~~~~~~~l~~~~~~---~v~~~~~D~~~~~~~~~~~~~~~~  121 (248)
                      -++|.|++|..|.-+++.+.+    .|..+.+.+||++++++..++..++.+.   ...++.||.+|++++.+++.    
T Consensus         7 DvVIyGASGfTG~yivee~v~~~~~~~~slavAGRn~~KL~~vL~~~~~k~~~~ls~~~i~i~D~~n~~Sl~emak----   82 (423)
T KOG2733|consen    7 DVVIYGASGFTGKYIVEEAVSSQVFEGLSLAVAGRNEKKLQEVLEKVGEKTGTDLSSSVILIADSANEASLDEMAK----   82 (423)
T ss_pred             eEEEEccccccceeeHHHHhhhhcccCceEEEecCCHHHHHHHHHHHhhccCCCcccceEEEecCCCHHHHHHHHh----
Confidence            489999999999999999998    6889999999999999999998887642   23488899999999999998    


Q ss_pred             HcCCccEEEEccccCC
Q 044010          122 HFGRLDHLVNNAGISS  137 (248)
Q Consensus       122 ~~g~id~vv~~ag~~~  137 (248)
                         +-.+++|++|...
T Consensus        83 ---~~~vivN~vGPyR   95 (423)
T KOG2733|consen   83 ---QARVIVNCVGPYR   95 (423)
T ss_pred             ---hhEEEEeccccce
Confidence               4679999999764

>PF03435 Saccharop_dh: Saccharopine dehydrogenase ; InterPro: IPR005097 This entry represents saccharopine dehydrogenase and homospermidine synthase

Probab=98.24  E-value=4.9e-06  Score=74.41  Aligned_cols=76  Identities=25%  Similarity=0.372  Sum_probs=59.4

Q ss_pred             EEEcCCCChHHHHHHHHHHHcC-C-eEEEEeCCcchHHHHHHHHHhhCCCcEEEEEccCCCHHHHHHHHHHHHhHcCCcc
Q 044010           50 VIITGASSGIGEHLAYEYARRG-A-CLALCARREKSLEEVADTAREIGSPDVITIRADVSKVDDCRSLVEETMNHFGRLD  127 (248)
Q Consensus        50 ~lVtGg~~gIG~aia~~l~~~G-~-~V~l~~r~~~~~~~~~~~l~~~~~~~v~~~~~D~~~~~~~~~~~~~~~~~~g~id  127 (248)
                      ++|.|+ |.+|..+++.|++++ . +|++.+|+.+++++..+++   ...++...++|+.|.++++++++       +.|
T Consensus         1 IlvlG~-G~vG~~~~~~L~~~~~~~~v~va~r~~~~~~~~~~~~---~~~~~~~~~~d~~~~~~l~~~~~-------~~d   69 (386)
T PF03435_consen    1 ILVLGA-GRVGSAIARLLARRGPFEEVTVADRNPEKAERLAEKL---LGDRVEAVQVDVNDPESLAELLR-------GCD   69 (386)
T ss_dssp             EEEE---SHHHHHHHHHHHCTTCE-EEEEEESSHHHHHHHHT-----TTTTEEEEE--TTTHHHHHHHHT-------TSS
T ss_pred             CEEEcC-cHHHHHHHHHHhcCCCCCcEEEEECCHHHHHHHHhhc---cccceeEEEEecCCHHHHHHHHh-------cCC
Confidence            689999 999999999999986 4 8999999998877766554   34589999999999999888876       569


Q ss_pred             EEEEccccC
Q 044010          128 HLVNNAGIS  136 (248)
Q Consensus       128 ~vv~~ag~~  136 (248)
                      ++||++|..
T Consensus        70 vVin~~gp~   78 (386)
T PF03435_consen   70 VVINCAGPF   78 (386)
T ss_dssp             EEEE-SSGG
T ss_pred             EEEECCccc
Confidence            999999876

Saccharopine reductase (SR) 1.5.1.10 from EC) catalyses the condensation of l-alpha-aminoadipate-delta-semialdehyde (AASA) with l-glutamate to give an imine, which is reduced by NADPH to give saccharopine []. In some organisms this enzyme is found as a bifunctional polypeptide with lysine ketoglutarate reductase (PF). Saccharopine dehydrogenase can also function as a saccharopine reductase. Homospermidine synthase proteins (2.5.1.44 from EC). Homospermidine synthase (HSS) catalyses the synthesis of the polyamine homospermidine from 2 mol putrescine in an NAD+-dependent reaction [].; GO: 0016491 oxidoreductase activity, 0055114 oxidation-reduction process; PDB: 2AXQ_A 1E5Q_A 1FF9_A 1E5L_A 2PH5_A 3IC5_A 3ABI_A.

>PLN00106 malate dehydrogenase

Probab=98.15  E-value=3.5e-05  Score=67.14  Aligned_cols=152  Identities=16%  Similarity=0.097  Sum_probs=96.3

Q ss_pred             CCCCCEEEEcCCCChHHHHHHHHHHHcCC--eEEEEeCCcchHHHHHHHHHhhCCCcEEEEEccCCCHHHHHHHHHHHHh
Q 044010           44 DVSGKVVIITGASSGIGEHLAYEYARRGA--CLALCARREKSLEEVADTAREIGSPDVITIRADVSKVDDCRSLVEETMN  121 (248)
Q Consensus        44 ~~~~k~~lVtGg~~gIG~aia~~l~~~G~--~V~l~~r~~~~~~~~~~~l~~~~~~~v~~~~~D~~~~~~~~~~~~~~~~  121 (248)
                      ....+++.|+|++|.+|.+++..|+.+|.  ++++.++++.+  .....+..... ..  ...++++.++..+.+     
T Consensus        15 ~~~~~KV~IiGaaG~VG~~~a~~l~~~~~~~el~L~Di~~~~--g~a~Dl~~~~~-~~--~i~~~~~~~d~~~~l-----   84 (323)
T PLN00106         15 GAPGFKVAVLGAAGGIGQPLSLLMKMNPLVSELHLYDIANTP--GVAADVSHINT-PA--QVRGFLGDDQLGDAL-----   84 (323)
T ss_pred             CCCCCEEEEECCCCHHHHHHHHHHHhCCCCCEEEEEecCCCC--eeEchhhhCCc-Cc--eEEEEeCCCCHHHHc-----
Confidence            34567999999999999999999997765  89999997722  11112322211 11  222433333333333     


Q ss_pred             HcCCccEEEEccccCCcccccccCChHHHHHHHHhhhHHHHHHHHHHhhhhhhcCCeEEEEcCcccc-------------
Q 044010          122 HFGRLDHLVNNAGISSVALFEDIVNITDFKQIMNINFWGSVYTTRFAVPHLRYTKGKIVVLSSAASW-------------  188 (248)
Q Consensus       122 ~~g~id~vv~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~g~iV~isS~~~~-------------  188 (248)
                        .+.|++|+.||.....       .+.+++.+..|+.....+.+.+.++   ...++|+++|.-..             
T Consensus        85 --~~aDiVVitAG~~~~~-------g~~R~dll~~N~~i~~~i~~~i~~~---~p~aivivvSNPvD~~~~i~t~~~~~~  152 (323)
T PLN00106         85 --KGADLVIIPAGVPRKP-------GMTRDDLFNINAGIVKTLCEAVAKH---CPNALVNIISNPVNSTVPIAAEVLKKA  152 (323)
T ss_pred             --CCCCEEEEeCCCCCCC-------CCCHHHHHHHHHHHHHHHHHHHHHH---CCCeEEEEeCCCccccHHHHHHHHHHc
Confidence              4899999999985431       1346677888888876666665544   23345555543332             


Q ss_pred             ccCCCCccchHHHHHHHHHHHHHHHHhCC
Q 044010          189 LTAPRMSFYNASKAALVLFFETLRVELGS  217 (248)
Q Consensus       189 ~~~~~~~~Y~~sKaal~~l~~~la~~~~~  217 (248)
                      .+.|..-.||.++.--..|-..++.+++-
T Consensus       153 s~~p~~~viG~~~LDs~Rl~~~lA~~lgv  181 (323)
T PLN00106        153 GVYDPKKLFGVTTLDVVRANTFVAEKKGL  181 (323)
T ss_pred             CCCCcceEEEEecchHHHHHHHHHHHhCC
Confidence            12344567899886666788888999863

>KOG1372 consensus GDP-mannose 4,6 dehydratase [Carbohydrate transport and metabolism]

Probab=98.15  E-value=4.9e-06  Score=68.55  Aligned_cols=173  Identities=16%  Similarity=0.059  Sum_probs=114.6

Q ss_pred             CCEEEEcCCCChHHHHHHHHHHHcCCeEEEEeCCcchHH-HHHHHHHh----hCCCcEEEEEccCCCHHHHHHHHHHHHh
Q 044010           47 GKVVIITGASSGIGEHLAYEYARRGACLALCARREKSLE-EVADTARE----IGSPDVITIRADVSKVDDCRSLVEETMN  121 (248)
Q Consensus        47 ~k~~lVtGg~~gIG~aia~~l~~~G~~V~l~~r~~~~~~-~~~~~l~~----~~~~~v~~~~~D~~~~~~~~~~~~~~~~  121 (248)
                      .|++||||-+|-=|.-+|+.|++.||+|.-+-|.....+ ..++.+-.    ..+......-.|.+|...+.++++.+  
T Consensus        28 rkvALITGItGQDGSYLaEfLL~KgYeVHGiiRRsSsFNT~RIeHlY~nP~~h~~~~mkLHYgDmTDss~L~k~I~~i--  105 (376)
T KOG1372|consen   28 RKVALITGITGQDGSYLAEFLLSKGYEVHGIIRRSSSFNTARIEHLYSNPHTHNGASMKLHYGDMTDSSCLIKLISTI--  105 (376)
T ss_pred             ceEEEEecccCCCchHHHHHHHhCCceeeEEEeeccccchhhhhhhhcCchhcccceeEEeeccccchHHHHHHHhcc--
Confidence            459999999999999999999999999987777554333 22233321    22346677889999999999999987  


Q ss_pred             HcCCccEEEEccccCCcccccccCChHHHHHHHHhhhHHHHHHHHHHhhhhhhcCCeEEEEcCccccc-----------c
Q 044010          122 HFGRLDHLVNNAGISSVALFEDIVNITDFKQIMNINFWGSVYTTRFAVPHLRYTKGKIVVLSSAASWL-----------T  190 (248)
Q Consensus       122 ~~g~id~vv~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~g~iV~isS~~~~~-----------~  190 (248)
                         +++-++|.|+-...+...+.     .+.+-++...|++.++.+...--...+-++--.|++.-+.           |
T Consensus       106 ---kPtEiYnLaAQSHVkvSFdl-----peYTAeVdavGtLRlLdAi~~c~l~~~VrfYQAstSElyGkv~e~PQsE~TP  177 (376)
T KOG1372|consen  106 ---KPTEVYNLAAQSHVKVSFDL-----PEYTAEVDAVGTLRLLDAIRACRLTEKVRFYQASTSELYGKVQEIPQSETTP  177 (376)
T ss_pred             ---CchhhhhhhhhcceEEEeec-----ccceeeccchhhhhHHHHHHhcCcccceeEEecccHhhcccccCCCcccCCC
Confidence               78888999887655533332     2355567788999888887664222333444444443222           2


Q ss_pred             CCCCccchHHHHHHHHHHHHHHHHhC----CCeEEEEEecCcc
Q 044010          191 APRMSFYNASKAALVLFFETLRVELG----SDVGVTIVTPGFI  229 (248)
Q Consensus       191 ~~~~~~Y~~sKaal~~l~~~la~~~~----~~i~v~~v~pg~v  229 (248)
                      ..+.++|+++|-+--..+-.++..|+    .+|-+|.=+|--=
T Consensus       178 FyPRSPYa~aKmy~~WivvNyREAYnmfAcNGILFNHESPRRG  220 (376)
T KOG1372|consen  178 FYPRSPYAAAKMYGYWIVVNYREAYNMFACNGILFNHESPRRG  220 (376)
T ss_pred             CCCCChhHHhhhhheEEEEEhHHhhcceeeccEeecCCCCccc
Confidence            23457899999765555555555553    2366665555433

>PRK14982 acyl-ACP reductase; Provisional

Probab=98.05  E-value=2.5e-05  Score=68.28  Aligned_cols=78  Identities=23%  Similarity=0.299  Sum_probs=56.8

Q ss_pred             ccccCCCCCEEEEcCCCChHHHHHHHHHHHc-C-CeEEEEeCCcchHHHHHHHHHhhCCCcEEEEEccCCCHHHHHHHHH
Q 044010           40 IFSEDVSGKVVIITGASSGIGEHLAYEYARR-G-ACLALCARREKSLEEVADTAREIGSPDVITIRADVSKVDDCRSLVE  117 (248)
Q Consensus        40 ~~~~~~~~k~~lVtGg~~gIG~aia~~l~~~-G-~~V~l~~r~~~~~~~~~~~l~~~~~~~v~~~~~D~~~~~~~~~~~~  117 (248)
                      .+..++++|+++||||+|.||..++++|+++ | .++++++|+.++++...+++..          .|+.   +++    
T Consensus       148 ~lg~~l~~k~VLVtGAtG~IGs~lar~L~~~~gv~~lilv~R~~~rl~~La~el~~----------~~i~---~l~----  210 (340)
T PRK14982        148 RLGIDLSKATVAVVGATGDIGSAVCRWLDAKTGVAELLLVARQQERLQELQAELGG----------GKIL---SLE----  210 (340)
T ss_pred             HhccCcCCCEEEEEccChHHHHHHHHHHHhhCCCCEEEEEcCCHHHHHHHHHHhcc----------ccHH---hHH----
Confidence            3345899999999999999999999999865 5 4899999987776665554321          1221   222    


Q ss_pred             HHHhHcCCccEEEEccccCC
Q 044010          118 ETMNHFGRLDHLVNNAGISS  137 (248)
Q Consensus       118 ~~~~~~g~id~vv~~ag~~~  137 (248)
                         +.+...|++|+.++...
T Consensus       211 ---~~l~~aDiVv~~ts~~~  227 (340)
T PRK14982        211 ---EALPEADIVVWVASMPK  227 (340)
T ss_pred             ---HHHccCCEEEECCcCCc
Confidence               23347999999998754

>PTZ00325 malate dehydrogenase; Provisional

Probab=97.94  E-value=9.1e-05  Score=64.52  Aligned_cols=148  Identities=16%  Similarity=0.072  Sum_probs=90.9

Q ss_pred             CCCCEEEEcCCCChHHHHHHHHHHHcC--CeEEEEeCCcchHHHHHHHHHhhCCCcEEEEEccCCCHHHHHHHHHHHHhH
Q 044010           45 VSGKVVIITGASSGIGEHLAYEYARRG--ACLALCARREKSLEEVADTAREIGSPDVITIRADVSKVDDCRSLVEETMNH  122 (248)
Q Consensus        45 ~~~k~~lVtGg~~gIG~aia~~l~~~G--~~V~l~~r~~~~~~~~~~~l~~~~~~~v~~~~~D~~~~~~~~~~~~~~~~~  122 (248)
                      .+.+++.|+|++|.+|..++..|+.+|  .++++.+++.  .+.....+.....   .....+.+|..+..+.+      
T Consensus         6 ~~~~KI~IiGaaG~VGs~~a~~l~~~~~~~elvL~Di~~--~~g~a~Dl~~~~~---~~~v~~~td~~~~~~~l------   74 (321)
T PTZ00325          6 LKMFKVAVLGAAGGIGQPLSLLLKQNPHVSELSLYDIVG--APGVAADLSHIDT---PAKVTGYADGELWEKAL------   74 (321)
T ss_pred             CCCCEEEEECCCCHHHHHHHHHHhcCCCCCEEEEEecCC--CcccccchhhcCc---CceEEEecCCCchHHHh------
Confidence            456799999999999999999999665  4899999932  2222223332221   12334555544432332      


Q ss_pred             cCCccEEEEccccCCcccccccCChHHHHHHHHhhhHHHHHHHHHHhhhhhhcCCeEEEEcCcccc-------------c
Q 044010          123 FGRLDHLVNNAGISSVALFEDIVNITDFKQIMNINFWGSVYTTRFAVPHLRYTKGKIVVLSSAASW-------------L  189 (248)
Q Consensus       123 ~g~id~vv~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~g~iV~isS~~~~-------------~  189 (248)
                       .+.|++|+++|.....       .+.+.+.+..|+...-.+.+...+.   ...++|+++|....             .
T Consensus        75 -~gaDvVVitaG~~~~~-------~~tR~dll~~N~~i~~~i~~~i~~~---~~~~iviv~SNPvdv~~~~~~~~~~~~s  143 (321)
T PTZ00325         75 -RGADLVLICAGVPRKP-------GMTRDDLFNTNAPIVRDLVAAVASS---APKAIVGIVSNPVNSTVPIAAETLKKAG  143 (321)
T ss_pred             -CCCCEEEECCCCCCCC-------CCCHHHHHHHHHHHHHHHHHHHHHH---CCCeEEEEecCcHHHHHHHHHhhhhhcc
Confidence             3799999999975321       1346677888888876666665433   22467777664331             1


Q ss_pred             cCCCCccchHHHHHHHHH--HHHHHHHhC
Q 044010          190 TAPRMSFYNASKAALVLF--FETLRVELG  216 (248)
Q Consensus       190 ~~~~~~~Y~~sKaal~~l--~~~la~~~~  216 (248)
                      +.|..-.||.+  .|++.  -..++..++
T Consensus       144 g~p~~~viG~g--~LDs~R~r~~la~~l~  170 (321)
T PTZ00325        144 VYDPRKLFGVT--TLDVVRARKFVAEALG  170 (321)
T ss_pred             CCChhheeech--hHHHHHHHHHHHHHhC
Confidence            22334467876  26554  556677774

>KOG1203 consensus Predicted dehydrogenase [Carbohydrate transport and metabolism]

Probab=97.92  E-value=0.00011  Score=65.50  Aligned_cols=138  Identities=17%  Similarity=0.173  Sum_probs=82.6

Q ss_pred             CCCCEEEEcCCCChHHHHHHHHHHHcCCeEEEEeCCcchHHHHHHHHHhhCCCcEEEEEccCCCHHHHH-HHHHHHHhHc
Q 044010           45 VSGKVVIITGASSGIGEHLAYEYARRGACLALCARREKSLEEVADTAREIGSPDVITIRADVSKVDDCR-SLVEETMNHF  123 (248)
Q Consensus        45 ~~~k~~lVtGg~~gIG~aia~~l~~~G~~V~l~~r~~~~~~~~~~~l~~~~~~~v~~~~~D~~~~~~~~-~~~~~~~~~~  123 (248)
                      .+-.+++|.||+|++|+-+++.|.++|+.|..+-|+.++.++....  .........+..|.....+.. .+++.+   .
T Consensus        77 ~~~~~VlVvGatG~vG~~iv~~llkrgf~vra~VRd~~~a~~~~~~--~~~d~~~~~v~~~~~~~~d~~~~~~~~~---~  151 (411)
T KOG1203|consen   77 KKPTTVLVVGATGKVGRRIVKILLKRGFSVRALVRDEQKAEDLLGV--FFVDLGLQNVEADVVTAIDILKKLVEAV---P  151 (411)
T ss_pred             CCCCeEEEecCCCchhHHHHHHHHHCCCeeeeeccChhhhhhhhcc--cccccccceeeeccccccchhhhhhhhc---c
Confidence            4567899999999999999999999999999999998776665441  111112334455555544332 232221   0


Q ss_pred             CCccEEEEccccCCcccccccCChHHHHHHHHhhhHHHHHHHHHHhhhhhhcCCeEEEEcCccccccCCCCccch
Q 044010          124 GRLDHLVNNAGISSVALFEDIVNITDFKQIMNINFWGSVYTTRFAVPHLRYTKGKIVVLSSAASWLTAPRMSFYN  198 (248)
Q Consensus       124 g~id~vv~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~g~iV~isS~~~~~~~~~~~~Y~  198 (248)
                      -...+++-++|..+..  +      |......+.+.|..++.+++...   .-.++|.+||..+....+.+..+.
T Consensus       152 ~~~~~v~~~~ggrp~~--e------d~~~p~~VD~~g~knlvdA~~~a---Gvk~~vlv~si~~~~~~~~~~~~~  215 (411)
T KOG1203|consen  152 KGVVIVIKGAGGRPEE--E------DIVTPEKVDYEGTKNLVDACKKA---GVKRVVLVGSIGGTKFNQPPNILL  215 (411)
T ss_pred             ccceeEEecccCCCCc--c------cCCCcceecHHHHHHHHHHHHHh---CCceEEEEEeecCcccCCCchhhh
Confidence            1345555555543322  1      11122234455666677776322   225899999988876655544444

>KOG1431 consensus GDP-L-fucose synthetase [Carbohydrate transport and metabolism; Posttranslational modification, protein turnover, chaperones]

Probab=97.88  E-value=0.00015  Score=59.27  Aligned_cols=146  Identities=21%  Similarity=0.234  Sum_probs=89.7

Q ss_pred             CEEEEcCCCChHHHHHHHHHHHcCC---eEEEEeCCcchHHHHHHHHHhhCCCcEEEEEccCCCHHHHHHHHHHHHhHcC
Q 044010           48 KVVIITGASSGIGEHLAYEYARRGA---CLALCARREKSLEEVADTAREIGSPDVITIRADVSKVDDCRSLVEETMNHFG  124 (248)
Q Consensus        48 k~~lVtGg~~gIG~aia~~l~~~G~---~V~l~~r~~~~~~~~~~~l~~~~~~~v~~~~~D~~~~~~~~~~~~~~~~~~g  124 (248)
                      ++++||||+|-.|.+|.+.+.++|.   +.++.+.                      -.+|+++.++.+++++..     
T Consensus         2 ~kIlVtGg~GLVGsAi~~vv~~q~~~~e~wvf~~s----------------------kd~DLt~~a~t~~lF~~e-----   54 (315)
T KOG1431|consen    2 KKILVTGGTGLVGSAIVKVVQEQGFDDENWVFIGS----------------------KDADLTNLADTRALFESE-----   54 (315)
T ss_pred             ceEEEecCCchHHHHHHHHHHhcCCCCcceEEecc----------------------ccccccchHHHHHHHhcc-----
Confidence            6899999999999999999998874   2333222                      237999999999999874     


Q ss_pred             CccEEEEccccCCccccccc-CChHHHHHHHHhhhHHHHHHHHHHhhhhhhcCCeEEEEcCccccc-----c--------
Q 044010          125 RLDHLVNNAGISSVALFEDI-VNITDFKQIMNINFWGSVYTTRFAVPHLRYTKGKIVVLSSAASWL-----T--------  190 (248)
Q Consensus       125 ~id~vv~~ag~~~~~~~~~~-~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~g~iV~isS~~~~~-----~--------  190 (248)
                      ++-+|||.|+-...- +... ...+-+..    |+.-.-++++.+...-.   -++|+..|.+-+-     |        
T Consensus        55 kPthVIhlAAmVGGl-f~N~~ynldF~r~----Nl~indNVlhsa~e~gv---~K~vsclStCIfPdkt~yPIdEtmvh~  126 (315)
T KOG1431|consen   55 KPTHVIHLAAMVGGL-FHNNTYNLDFIRK----NLQINDNVLHSAHEHGV---KKVVSCLSTCIFPDKTSYPIDETMVHN  126 (315)
T ss_pred             CCceeeehHhhhcch-hhcCCCchHHHhh----cceechhHHHHHHHhch---hhhhhhcceeecCCCCCCCCCHHHhcc
Confidence            788999998743210 1110 12233333    33333344455443321   1345544433221     1        


Q ss_pred             ---CCCCccchHHHHHHHHHHHHHHHHhCCCeEEEEEecCccc
Q 044010          191 ---APRMSFYNASKAALVLFFETLRVELGSDVGVTIVTPGFIE  230 (248)
Q Consensus       191 ---~~~~~~Y~~sKaal~~l~~~la~~~~~~i~v~~v~pg~v~  230 (248)
                         -|....|+.+|.-+.-..+.++.+++.+  ..++.|--+.
T Consensus       127 gpphpsN~gYsyAKr~idv~n~aY~~qhg~~--~tsviPtNvf  167 (315)
T KOG1431|consen  127 GPPHPSNFGYSYAKRMIDVQNQAYRQQHGRD--YTSVIPTNVF  167 (315)
T ss_pred             CCCCCCchHHHHHHHHHHHHHHHHHHHhCCc--eeeecccccc
Confidence               1233469999988888889999998753  3334444443

>cd01065 NAD_bind_Shikimate_DH NAD(P) binding domain of Shikimate dehydrogenase

Probab=97.84  E-value=0.00011  Score=56.84  Aligned_cols=77  Identities=25%  Similarity=0.441  Sum_probs=56.3

Q ss_pred             CCCCCEEEEcCCCChHHHHHHHHHHHcC-CeEEEEeCCcchHHHHHHHHHhhCCCcEEEEEccCCCHHHHHHHHHHHHhH
Q 044010           44 DVSGKVVIITGASSGIGEHLAYEYARRG-ACLALCARREKSLEEVADTAREIGSPDVITIRADVSKVDDCRSLVEETMNH  122 (248)
Q Consensus        44 ~~~~k~~lVtGg~~gIG~aia~~l~~~G-~~V~l~~r~~~~~~~~~~~l~~~~~~~v~~~~~D~~~~~~~~~~~~~~~~~  122 (248)
                      ++++++++|+|+ |++|.++++.|++.| .+|.+.+|+.++.++..+++....      +..+..+.++.          
T Consensus        16 ~~~~~~i~iiG~-G~~g~~~a~~l~~~g~~~v~v~~r~~~~~~~~~~~~~~~~------~~~~~~~~~~~----------   78 (155)
T cd01065          16 ELKGKKVLILGA-GGAARAVAYALAELGAAKIVIVNRTLEKAKALAERFGELG------IAIAYLDLEEL----------   78 (155)
T ss_pred             CCCCCEEEEECC-cHHHHHHHHHHHHCCCCEEEEEcCCHHHHHHHHHHHhhcc------cceeecchhhc----------
Confidence            467899999998 899999999999996 689999999887777666554221      22333333222          


Q ss_pred             cCCccEEEEccccCC
Q 044010          123 FGRLDHLVNNAGISS  137 (248)
Q Consensus       123 ~g~id~vv~~ag~~~  137 (248)
                      ..+.|++|++++...
T Consensus        79 ~~~~Dvvi~~~~~~~   93 (155)
T cd01065          79 LAEADLIINTTPVGM   93 (155)
T ss_pred             cccCCEEEeCcCCCC
Confidence            247999999987654

Shikimate dehydrogenase (DH) is an amino acid DH family member. Shikimate pathway links metabolism of carbohydrates to de novo biosynthesis of aromatic amino acids, quinones and folate. It is essential in plants, bacteria, and fungi but absent in mammals, thus making enzymes involved in this pathway ideal targets for broad spectrum antibiotics and herbicides. Shikimate DH catalyzes the reduction of 3-hydroshikimate to shikimate using the cofactor NADH. Amino acid DH-like NAD(P)-binding domains are members of the Rossmann fold superfamily and include glutamate, leucine, and phenylalanine DHs, methylene tetrahydrofolate DH, methylene-tetrahydromethanopterin DH, methylene-tetrahydropholate DH/cyclohydrolase, Shikimate DH-like proteins, malate oxidoreductases, and glutamyl tRNA reductase. Amino acid DHs catalyze the deamination of amino acids to keto acids with NAD(P)+ as a cofactor. The NAD(P)-binding Rossmann

>cd01336 MDH_cytoplasmic_cytosolic Cytoplasmic and cytosolic Malate dehydrogenases

Probab=97.82  E-value=0.0002  Score=62.61  Aligned_cols=117  Identities=17%  Similarity=0.132  Sum_probs=64.4

Q ss_pred             EEEEcCCCChHHHHHHHHHHHcC-------CeEEEEeCCcch--HHHHHHHHHhhCCCcEEEEEccCCCHHHHHHHHHHH
Q 044010           49 VVIITGASSGIGEHLAYEYARRG-------ACLALCARREKS--LEEVADTAREIGSPDVITIRADVSKVDDCRSLVEET  119 (248)
Q Consensus        49 ~~lVtGg~~gIG~aia~~l~~~G-------~~V~l~~r~~~~--~~~~~~~l~~~~~~~v~~~~~D~~~~~~~~~~~~~~  119 (248)
                      +++|||++|.+|.+++..|+.+|       .+|++.++++..  ++.....+....    .....|++...+..      
T Consensus         4 kV~I~GAaG~VG~~la~~L~~~~~~~~~~~~el~L~D~~~~~~~~~g~~~Dl~d~~----~~~~~~~~~~~~~~------   73 (325)
T cd01336           4 RVLVTGAAGQIAYSLLPMIAKGDVFGPDQPVILHLLDIPPALKALEGVVMELQDCA----FPLLKSVVATTDPE------   73 (325)
T ss_pred             EEEEECCCCHHHHHHHHHHHhCcccCCCCCcEEEEEEcCCccccccceeeehhhcc----ccccCCceecCCHH------
Confidence            58999999999999999999854       589999996531  222111111000    01112333333332      


Q ss_pred             HhHcCCccEEEEccccCCcccccccCChHHHHHHHHhhhHHHHHHHHHHhhhhhhcCCeEEEEcC
Q 044010          120 MNHFGRLDHLVNNAGISSVALFEDIVNITDFKQIMNINFWGSVYTTRFAVPHLRYTKGKIVVLSS  184 (248)
Q Consensus       120 ~~~~g~id~vv~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~g~iV~isS  184 (248)
                       +.+.+.|+|||+||.....   .    ++-.+.++.|+.-.-.+.+.+.+.-. .++.++++|.
T Consensus        74 -~~l~~aDiVI~tAG~~~~~---~----~~R~~l~~~N~~i~~~i~~~i~~~~~-~~~iiivvsN  129 (325)
T cd01336          74 -EAFKDVDVAILVGAMPRKE---G----MERKDLLKANVKIFKEQGEALDKYAK-KNVKVLVVGN  129 (325)
T ss_pred             -HHhCCCCEEEEeCCcCCCC---C----CCHHHHHHHHHHHHHHHHHHHHHhCC-CCeEEEEecC
Confidence             2334799999999986432   1    12245555565544333333332211 2356666664

MDH is one of the key enzymes in the citric acid cycle, facilitating both the conversion of malate to oxaloacetate and replenishing levels of oxalacetate by reductive carboxylation of pyruvate. Members of this subfamily are eukaryotic MDHs localized to the cytoplasm and cytosol. MDHs are part of the NAD(P)-binding Rossmann fold superfamily, which includes a wide variety of protein families including the NAD(P)-binding domains of alcohol dehydrogenases, tyrosine-dependent oxidoreductases, glyceraldehyde-3-phosphate dehydrogenases, formate/glycerate dehydrogenases, siroheme synthases, 6-phosphogluconate dehydrogenases, aminoacid dehydrogenases, repressor rex, and NAD-binding potassium channel domains, among others.

>PRK00258 aroE shikimate 5-dehydrogenase; Reviewed

Probab=97.79  E-value=0.00011  Score=62.90  Aligned_cols=78  Identities=22%  Similarity=0.362  Sum_probs=57.1

Q ss_pred             cCCCCCEEEEcCCCChHHHHHHHHHHHcC-CeEEEEeCCcchHHHHHHHHHhhCCCcEEEEEccCCCHHHHHHHHHHHHh
Q 044010           43 EDVSGKVVIITGASSGIGEHLAYEYARRG-ACLALCARREKSLEEVADTAREIGSPDVITIRADVSKVDDCRSLVEETMN  121 (248)
Q Consensus        43 ~~~~~k~~lVtGg~~gIG~aia~~l~~~G-~~V~l~~r~~~~~~~~~~~l~~~~~~~v~~~~~D~~~~~~~~~~~~~~~~  121 (248)
                      .++++|+++|+|+ ||+|+++++.|++.| .+|.+++|+.++.++..+++....  .+.+   +.    +.       .+
T Consensus       119 ~~~~~k~vlVlGa-Gg~a~ai~~aL~~~g~~~V~v~~R~~~~a~~l~~~~~~~~--~~~~---~~----~~-------~~  181 (278)
T PRK00258        119 VDLKGKRILILGA-GGAARAVILPLLDLGVAEITIVNRTVERAEELAKLFGALG--KAEL---DL----EL-------QE  181 (278)
T ss_pred             CCCCCCEEEEEcC-cHHHHHHHHHHHHcCCCEEEEEeCCHHHHHHHHHHhhhcc--ceee---cc----cc-------hh
Confidence            3688999999987 899999999999999 599999999988887777664321  1111   11    11       12


Q ss_pred             HcCCccEEEEccccCC
Q 044010          122 HFGRLDHLVNNAGISS  137 (248)
Q Consensus       122 ~~g~id~vv~~ag~~~  137 (248)
                      .....|++||+.....
T Consensus       182 ~~~~~DivInaTp~g~  197 (278)
T PRK00258        182 ELADFDLIINATSAGM  197 (278)
T ss_pred             ccccCCEEEECCcCCC
Confidence            2247899999987654

>PRK02472 murD UDP-N-acetylmuramoyl-L-alanyl-D-glutamate synthetase; Provisional

Probab=97.78  E-value=7.2e-05  Score=68.15  Aligned_cols=82  Identities=21%  Similarity=0.229  Sum_probs=55.8

Q ss_pred             cCCCCCEEEEcCCCChHHHHHHHHHHHcCCeEEEEeCCcchHHHHHHHHHhhCCCcEEEEEccCCCHHHHHHHHHHHHhH
Q 044010           43 EDVSGKVVIITGASSGIGEHLAYEYARRGACLALCARREKSLEEVADTAREIGSPDVITIRADVSKVDDCRSLVEETMNH  122 (248)
Q Consensus        43 ~~~~~k~~lVtGg~~gIG~aia~~l~~~G~~V~l~~r~~~~~~~~~~~l~~~~~~~v~~~~~D~~~~~~~~~~~~~~~~~  122 (248)
                      |+++||+++|||+++ +|.++|+.|+++|++|++.+++........++++..+   +.+...+  +...+   .+     
T Consensus         1 ~~~~~k~v~v~G~g~-~G~s~a~~l~~~G~~V~~~d~~~~~~~~~~~~l~~~g---~~~~~~~--~~~~~---~~-----   66 (447)
T PRK02472          1 TEYQNKKVLVLGLAK-SGYAAAKLLHKLGANVTVNDGKPFSENPEAQELLEEG---IKVICGS--HPLEL---LD-----   66 (447)
T ss_pred             CCcCCCEEEEEeeCH-HHHHHHHHHHHCCCEEEEEcCCCccchhHHHHHHhcC---CEEEeCC--CCHHH---hc-----
Confidence            467899999999975 9999999999999999999987654444445555433   2222211  11111   11     


Q ss_pred             cCCccEEEEccccCCcc
Q 044010          123 FGRLDHLVNNAGISSVA  139 (248)
Q Consensus       123 ~g~id~vv~~ag~~~~~  139 (248)
                       ..+|.+|+++|+....
T Consensus        67 -~~~d~vV~s~gi~~~~   82 (447)
T PRK02472         67 -EDFDLMVKNPGIPYTN   82 (447)
T ss_pred             -CcCCEEEECCCCCCCC
Confidence             1489999999987543

>TIGR00507 aroE shikimate 5-dehydrogenase

Probab=97.76  E-value=0.00017  Score=61.37  Aligned_cols=76  Identities=21%  Similarity=0.363  Sum_probs=56.4

Q ss_pred             CCCCCEEEEcCCCChHHHHHHHHHHHcCCeEEEEeCCcchHHHHHHHHHhhCCCcEEEEEccCCCHHHHHHHHHHHHhHc
Q 044010           44 DVSGKVVIITGASSGIGEHLAYEYARRGACLALCARREKSLEEVADTAREIGSPDVITIRADVSKVDDCRSLVEETMNHF  123 (248)
Q Consensus        44 ~~~~k~~lVtGg~~gIG~aia~~l~~~G~~V~l~~r~~~~~~~~~~~l~~~~~~~v~~~~~D~~~~~~~~~~~~~~~~~~  123 (248)
                      ..++|+++|+|+ ||+|++++..|++.|++|.+.+|+.++.++..+.+...+  .......|     +   .      ..
T Consensus       114 ~~~~k~vliiGa-Gg~g~aia~~L~~~g~~v~v~~R~~~~~~~la~~~~~~~--~~~~~~~~-----~---~------~~  176 (270)
T TIGR00507       114 LRPNQRVLIIGA-GGAARAVALPLLKADCNVIIANRTVSKAEELAERFQRYG--EIQAFSMD-----E---L------PL  176 (270)
T ss_pred             CccCCEEEEEcC-cHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHhhcC--ceEEechh-----h---h------cc
Confidence            456899999998 699999999999999999999999888887777765432  22222111     1   0      12


Q ss_pred             CCccEEEEccccC
Q 044010          124 GRLDHLVNNAGIS  136 (248)
Q Consensus       124 g~id~vv~~ag~~  136 (248)
                      ...|++||+.+..
T Consensus       177 ~~~DivInatp~g  189 (270)
T TIGR00507       177 HRVDLIINATSAG  189 (270)
T ss_pred             cCccEEEECCCCC
Confidence            3689999999875

This model finds proteins from prokaryotes and functionally equivalent domains from larger, multifunctional proteins of fungi and plants. Below the trusted cutoff of 180, but above the noise cutoff of 20, are the putative shikimate dehydrogenases of Thermotoga maritima and Mycobacterium tuberculosis, and uncharacterized paralogs of shikimate dehydrogenase from E. coli and H. influenzae. The related enzyme quinate 5-dehydrogenase scores below the noise cutoff. A neighbor-joining tree, constructed with quinate 5-dehydrogenases as the outgroup, shows the Clamydial homolog as clustering among the shikimate dehydrogenases, although the sequence is unusual in the degree of sequence divergence and the presence of an additional N-terminal domain.

>cd08253 zeta_crystallin Zeta-crystallin with NADP-dependent quinone reductase activity (QOR)

Probab=97.75  E-value=0.00037  Score=59.67  Aligned_cols=138  Identities=19%  Similarity=0.212  Sum_probs=82.6

Q ss_pred             CCCEEEEcCCCChHHHHHHHHHHHcCCeEEEEeCCcchHHHHHHHHHhhCCCcEEEEEccCCCHHHHHHHHHHHHhHcCC
Q 044010           46 SGKVVIITGASSGIGEHLAYEYARRGACLALCARREKSLEEVADTAREIGSPDVITIRADVSKVDDCRSLVEETMNHFGR  125 (248)
Q Consensus        46 ~~k~~lVtGg~~gIG~aia~~l~~~G~~V~l~~r~~~~~~~~~~~l~~~~~~~v~~~~~D~~~~~~~~~~~~~~~~~~g~  125 (248)
                      +|++++|+|+++++|.++++.+.+.|.+|++++++.++.+..    .+.+. +   ..+|..+.+..+.+.+.. + .+.
T Consensus       144 ~g~~vlI~g~~~~~g~~~~~~a~~~g~~v~~~~~~~~~~~~~----~~~g~-~---~~~~~~~~~~~~~~~~~~-~-~~~  213 (325)
T cd08253         144 AGETVLVHGGSGAVGHAAVQLARWAGARVIATASSAEGAELV----RQAGA-D---AVFNYRAEDLADRILAAT-A-GQG  213 (325)
T ss_pred             CCCEEEEEcCCchHHHHHHHHHHHcCCEEEEEeCCHHHHHHH----HHcCC-C---EEEeCCCcCHHHHHHHHc-C-CCc
Confidence            589999999999999999999999999999999887554433    22222 1   224555544444433322 1 136


Q ss_pred             ccEEEEccccCCcccccccCChHHHHHHHHhhhHHHHHHHHHHhhhhhhcCCeEEEEcCccc------------cccCCC
Q 044010          126 LDHLVNNAGISSVALFEDIVNITDFKQIMNINFWGSVYTTRFAVPHLRYTKGKIVVLSSAAS------------WLTAPR  193 (248)
Q Consensus       126 id~vv~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~g~iV~isS~~~------------~~~~~~  193 (248)
                      +|.+++++|...            .+..+               ..+ +..|+++.+++...            ......
T Consensus       214 ~d~vi~~~~~~~------------~~~~~---------------~~l-~~~g~~v~~~~~~~~~~~~~~~~~~~~~~~~~  265 (325)
T cd08253         214 VDVIIEVLANVN------------LAKDL---------------DVL-APGGRIVVYGSGGLRGTIPINPLMAKEASIRG  265 (325)
T ss_pred             eEEEEECCchHH------------HHHHH---------------Hhh-CCCCEEEEEeecCCcCCCChhHHHhcCceEEe
Confidence            999999886311            11110               112 24578888875321            011112


Q ss_pred             CccchHHHHHHHHHHHHHHHHhCCC-eEE
Q 044010          194 MSFYNASKAALVLFFETLRVELGSD-VGV  221 (248)
Q Consensus       194 ~~~Y~~sKaal~~l~~~la~~~~~~-i~v  221 (248)
                      ...|..+|..+..+.+.+...+..+ ++.
T Consensus       266 ~~~~~~~~~~~~~~~~~~~~~~~~~~i~~  294 (325)
T cd08253         266 VLLYTATPEERAAAAEAIAAGLADGALRP  294 (325)
T ss_pred             eehhhcCHHHHHHHHHHHHHHHHCCCccC
Confidence            2346677777777777776666443 443

Zeta-crystallin is a eye lens protein with NADP-dependent quinone reductase activity (QOR). It has been cited as a structural component in mammalian eyes, but also has homology to quinone reductases in unrelated species. QOR catalyzes the conversion of a quinone and NAD(P)H to a hydroquinone and NAD(P+. Quinones are cyclic diones derived from aromatic compounds. Membrane bound QOR acts in the respiratory chains of bacteria and mitochondria, while soluble QOR acts to protect from toxic quinones (e.g. DT-diaphorase) or as a soluble eye-lens protein in some vertebrates (e.g. zeta-crystalin). QOR reduces quinones through a semi-quinone intermediate via a NAD(P)H-dependent single electron transfer. QOR is a member of the medium chain dehydrogenase/reductase family, but lacks the zinc-binding sites of the prototypical alcohol dehydrogenases of this group. Alcohol dehydrogenase in the liver converts

>PF04127 DFP: DNA / pantothenate metabolism flavoprotein; InterPro: IPR007085 This entry represents the C-terminal domain found in DNA/pantothenate metabolism flavoproteins, which affects synthesis of DNA and pantothenate metabolism

Probab=97.74  E-value=0.00014  Score=58.27  Aligned_cols=81  Identities=31%  Similarity=0.381  Sum_probs=49.9

Q ss_pred             CCCCEEEEcCC----------------CChHHHHHHHHHHHcCCeEEEEeCCcchHHHHHHHHHhhCCCcEEEEEccCCC
Q 044010           45 VSGKVVIITGA----------------SSGIGEHLAYEYARRGACLALCARREKSLEEVADTAREIGSPDVITIRADVSK  108 (248)
Q Consensus        45 ~~~k~~lVtGg----------------~~gIG~aia~~l~~~G~~V~l~~r~~~~~~~~~~~l~~~~~~~v~~~~~D~~~  108 (248)
                      ++||++|||+|                ||-.|.++|+.++.+|++|.++..... ...         +..+..+  ++..
T Consensus         1 l~gk~vlITaG~T~E~iD~VR~ItN~SSG~~G~~lA~~~~~~Ga~V~li~g~~~-~~~---------p~~~~~i--~v~s   68 (185)
T PF04127_consen    1 LKGKKVLITAGPTREPIDPVRFITNRSSGKMGAALAEEAARRGAEVTLIHGPSS-LPP---------PPGVKVI--RVES   68 (185)
T ss_dssp             -TT-EEEEEESB-EEESSSSEEEEES--SHHHHHHHHHHHHTT-EEEEEE-TTS--------------TTEEEE--E-SS
T ss_pred             CCCCEEEEECCCccccCCCceEecCCCcCHHHHHHHHHHHHCCCEEEEEecCcc-ccc---------cccceEE--Eecc
Confidence            57899999988                467999999999999999999988742 110         1244444  4545


Q ss_pred             HHHHHHHHHHHHhHcCCccEEEEccccCCccc
Q 044010          109 VDDCRSLVEETMNHFGRLDHLVNNAGISSVAL  140 (248)
Q Consensus       109 ~~~~~~~~~~~~~~~g~id~vv~~ag~~~~~~  140 (248)
                      .+++.+.+   .+.+..-|++|++|++....+
T Consensus        69 a~em~~~~---~~~~~~~Di~I~aAAVsDf~p   97 (185)
T PF04127_consen   69 AEEMLEAV---KELLPSADIIIMAAAVSDFRP   97 (185)
T ss_dssp             HHHHHHHH---HHHGGGGSEEEE-SB--SEEE
T ss_pred             hhhhhhhh---ccccCcceeEEEecchhheee
Confidence            55444444   455556699999999886443

These proteins contain ATP, phosphopantothenate, and cysteine binding sites. The structure of this domain has been determined in human phosphopantothenoylcysteine (PPC) synthetase [] and as the PPC synthase domain (CoaB) from the Escherichia coli coenzyme A bifunctional protein CoaBC []. This domain adopts a 3-layer alpha/beta/alpha fold with mixed beta-sheets, which topologically resembles a combination of Rossmann-like and ribokinase-like folds. The structure of these proteins predicts a ping pong mechanism with initial formation of an acyladenylate intermediate, followed by release of pyrophosphate and attack by cysteine to form the final products PPC and AMP. ; PDB: 1U7W_A 1U7U_A 1U80_C 1U7Z_A 1P9O_B 2GK4_A.

>COG2910 Putative NADH-flavin reductase [General function prediction only]

Probab=97.69  E-value=0.002  Score=51.09  Aligned_cols=148  Identities=19%  Similarity=0.229  Sum_probs=96.3

Q ss_pred             EEEEcCCCChHHHHHHHHHHHcCCeEEEEeCCcchHHHHHHHHHhhCCCcEEEEEccCCCHHHHHHHHHHHHhHcCCccE
Q 044010           49 VVIITGASSGIGEHLAYEYARRGACLALCARREKSLEEVADTAREIGSPDVITIRADVSKVDDCRSLVEETMNHFGRLDH  128 (248)
Q Consensus        49 ~~lVtGg~~gIG~aia~~l~~~G~~V~l~~r~~~~~~~~~~~l~~~~~~~v~~~~~D~~~~~~~~~~~~~~~~~~g~id~  128 (248)
                      ++-|.|+||-.|..+++...++|++|..+.||+.+....         ..+...+.|+.|.+++.+.+.       +.|+
T Consensus         2 KIaiIgAsG~~Gs~i~~EA~~RGHeVTAivRn~~K~~~~---------~~~~i~q~Difd~~~~a~~l~-------g~Da   65 (211)
T COG2910           2 KIAIIGASGKAGSRILKEALKRGHEVTAIVRNASKLAAR---------QGVTILQKDIFDLTSLASDLA-------GHDA   65 (211)
T ss_pred             eEEEEecCchhHHHHHHHHHhCCCeeEEEEeChHhcccc---------ccceeecccccChhhhHhhhc-------CCce
Confidence            466899999999999999999999999999998765432         156688999999998865554       8999


Q ss_pred             EEEccccCCcccccccCChHHHHHHHHhhhHHHHHHHHHHhhhhhh-cCCeEEEEcCcccccc--------CCCCc-c-c
Q 044010          129 LVNNAGISSVALFEDIVNITDFKQIMNINFWGSVYTTRFAVPHLRY-TKGKIVVLSSAASWLT--------APRMS-F-Y  197 (248)
Q Consensus       129 vv~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~-~~g~iV~isS~~~~~~--------~~~~~-~-Y  197 (248)
                      ||..-|...+..     . +.....           .+.+...++. ...|++.++...+..-        .|..+ . |
T Consensus        66 VIsA~~~~~~~~-----~-~~~~k~-----------~~~li~~l~~agv~RllVVGGAGSL~id~g~rLvD~p~fP~ey~  128 (211)
T COG2910          66 VISAFGAGASDN-----D-ELHSKS-----------IEALIEALKGAGVPRLLVVGGAGSLEIDEGTRLVDTPDFPAEYK  128 (211)
T ss_pred             EEEeccCCCCCh-----h-HHHHHH-----------HHHHHHHHhhcCCeeEEEEcCccceEEcCCceeecCCCCchhHH
Confidence            999988764321     1 111111           3455555554 3368888876665432        22222 2 4


Q ss_pred             hHHHHHHHHHHHHHHHHhCCCeEEEEEecCccccC
Q 044010          198 NASKAALVLFFETLRVELGSDVGVTIVTPGFIESE  232 (248)
Q Consensus       198 ~~sKaal~~l~~~la~~~~~~i~v~~v~pg~v~T~  232 (248)
                      ..+++.-+ ....|..+-+  +.-.-|+|....-|
T Consensus       129 ~~A~~~ae-~L~~Lr~~~~--l~WTfvSPaa~f~P  160 (211)
T COG2910         129 PEALAQAE-FLDSLRAEKS--LDWTFVSPAAFFEP  160 (211)
T ss_pred             HHHHHHHH-HHHHHhhccC--cceEEeCcHHhcCC
Confidence            44444433 3345555533  56666788766544

>cd08266 Zn_ADH_like1 Alcohol dehydrogenases of the MDR family

Probab=97.64  E-value=0.0016  Score=56.33  Aligned_cols=80  Identities=31%  Similarity=0.393  Sum_probs=57.0

Q ss_pred             CCCCEEEEcCCCChHHHHHHHHHHHcCCeEEEEeCCcchHHHHHHHHHhhCCCcEEEEEccCCCHHHHHHHHHHHHhHcC
Q 044010           45 VSGKVVIITGASSGIGEHLAYEYARRGACLALCARREKSLEEVADTAREIGSPDVITIRADVSKVDDCRSLVEETMNHFG  124 (248)
Q Consensus        45 ~~~k~~lVtGg~~gIG~aia~~l~~~G~~V~l~~r~~~~~~~~~~~l~~~~~~~v~~~~~D~~~~~~~~~~~~~~~~~~g  124 (248)
                      .++++++|+|+++++|.++++.+...|++|++++++.++.+.+    ...+. .   ...|..+.+..+.+.+...+  +
T Consensus       165 ~~~~~vlI~g~~~~iG~~~~~~~~~~g~~v~~~~~~~~~~~~~----~~~~~-~---~~~~~~~~~~~~~~~~~~~~--~  234 (342)
T cd08266         165 RPGETVLVHGAGSGVGSAAIQIAKLFGATVIATAGSEDKLERA----KELGA-D---YVIDYRKEDFVREVRELTGK--R  234 (342)
T ss_pred             CCCCEEEEECCCchHHHHHHHHHHHcCCEEEEEeCCHHHHHHH----HHcCC-C---eEEecCChHHHHHHHHHhCC--C
Confidence            3578999999999999999999999999999999887654433    22222 1   22466665555555443322  3


Q ss_pred             CccEEEEccc
Q 044010          125 RLDHLVNNAG  134 (248)
Q Consensus       125 ~id~vv~~ag  134 (248)
                      ++|++++++|
T Consensus       235 ~~d~~i~~~g  244 (342)
T cd08266         235 GVDVVVEHVG  244 (342)
T ss_pred             CCcEEEECCc
Confidence            6999999987

This group contains proteins related to the zinc-dependent alcohol dehydrogenases. However, while the group has structural zinc site characteristic of these enzymes, it lacks the consensus site for a catalytic zinc. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde and NADH, while in yeast and some other microorganisms ADH catalyzes the conversion acetaldehyde to ethanol in alcoholic fermentation. ADH is a member of the medium chain alcohol dehydrogenase family (MDR), which has a NAD(P)(H)-binding domain in a Rossmann fold of a beta-alpha form. The NAD(H)-binding region is comprised of 2 structurally similar halves, each of which contacts a mononucleotide. A GxGxxG motif after the first mononucleotide contact half allows the close contact of the coenzyme with the ADH backbone

>PLN02520 bifunctional 3-dehydroquinate dehydratase/shikimate dehydrogenase

Probab=97.64  E-value=0.00016  Score=67.29  Aligned_cols=48  Identities=31%  Similarity=0.580  Sum_probs=41.7

Q ss_pred             cCCCCCEEEEcCCCChHHHHHHHHHHHcCCeEEEEeCCcchHHHHHHHH
Q 044010           43 EDVSGKVVIITGASSGIGEHLAYEYARRGACLALCARREKSLEEVADTA   91 (248)
Q Consensus        43 ~~~~~k~~lVtGg~~gIG~aia~~l~~~G~~V~l~~r~~~~~~~~~~~l   91 (248)
                      .++++|+++|+|+ ||+|++++..|+++|++|.+++|+.++.++..+++
T Consensus       375 ~~~~~k~vlIlGa-GGagrAia~~L~~~G~~V~i~nR~~e~a~~la~~l  422 (529)
T PLN02520        375 SPLAGKLFVVIGA-GGAGKALAYGAKEKGARVVIANRTYERAKELADAV  422 (529)
T ss_pred             cCCCCCEEEEECC-cHHHHHHHHHHHHCCCEEEEEcCCHHHHHHHHHHh
Confidence            3678999999999 69999999999999999999999887777665554

>COG0169 AroE Shikimate 5-dehydrogenase [Amino acid transport and metabolism]

Probab=97.61  E-value=0.00048  Score=58.81  Aligned_cols=82  Identities=29%  Similarity=0.460  Sum_probs=60.8

Q ss_pred             cCCCCCEEEEcCCCChHHHHHHHHHHHcCC-eEEEEeCCcchHHHHHHHHHhhCCCcEEEEEccCCCHHHHHHHHHHHHh
Q 044010           43 EDVSGKVVIITGASSGIGEHLAYEYARRGA-CLALCARREKSLEEVADTAREIGSPDVITIRADVSKVDDCRSLVEETMN  121 (248)
Q Consensus        43 ~~~~~k~~lVtGg~~gIG~aia~~l~~~G~-~V~l~~r~~~~~~~~~~~l~~~~~~~v~~~~~D~~~~~~~~~~~~~~~~  121 (248)
                      .+.+|++++|.|+ ||-+++++..|++.|. ++.++.|+.++.++..+.+.+.+. .  ....+..+.+..+        
T Consensus       122 ~~~~~~~vlilGA-GGAarAv~~aL~~~g~~~i~V~NRt~~ra~~La~~~~~~~~-~--~~~~~~~~~~~~~--------  189 (283)
T COG0169         122 VDVTGKRVLILGA-GGAARAVAFALAEAGAKRITVVNRTRERAEELADLFGELGA-A--VEAAALADLEGLE--------  189 (283)
T ss_pred             cccCCCEEEEECC-cHHHHHHHHHHHHcCCCEEEEEeCCHHHHHHHHHHhhhccc-c--ccccccccccccc--------
Confidence            4667999999977 8999999999999996 899999999999998888876553 1  1112222222111        


Q ss_pred             HcCCccEEEEccccCCcc
Q 044010          122 HFGRLDHLVNNAGISSVA  139 (248)
Q Consensus       122 ~~g~id~vv~~ag~~~~~  139 (248)
                         ..|++||+....-..
T Consensus       190 ---~~dliINaTp~Gm~~  204 (283)
T COG0169         190 ---EADLLINATPVGMAG  204 (283)
T ss_pred             ---ccCEEEECCCCCCCC
Confidence               489999998866443

>PRK12549 shikimate 5-dehydrogenase; Reviewed

Probab=97.57  E-value=0.0009  Score=57.40  Aligned_cols=79  Identities=20%  Similarity=0.178  Sum_probs=57.7

Q ss_pred             CCCCCEEEEcCCCChHHHHHHHHHHHcCC-eEEEEeCCcchHHHHHHHHHhhCCCcEEEEEccCCCHHHHHHHHHHHHhH
Q 044010           44 DVSGKVVIITGASSGIGEHLAYEYARRGA-CLALCARREKSLEEVADTAREIGSPDVITIRADVSKVDDCRSLVEETMNH  122 (248)
Q Consensus        44 ~~~~k~~lVtGg~~gIG~aia~~l~~~G~-~V~l~~r~~~~~~~~~~~l~~~~~~~v~~~~~D~~~~~~~~~~~~~~~~~  122 (248)
                      +.++|+++|.|+ ||.|++++..|++.|. +|.+++|+.++.++..+.+..... ...+...     +++.       +.
T Consensus       124 ~~~~k~vlIlGa-GGaaraia~aL~~~G~~~I~I~nR~~~ka~~la~~l~~~~~-~~~~~~~-----~~~~-------~~  189 (284)
T PRK12549        124 DASLERVVQLGA-GGAGAAVAHALLTLGVERLTIFDVDPARAAALADELNARFP-AARATAG-----SDLA-------AA  189 (284)
T ss_pred             CccCCEEEEECC-cHHHHHHHHHHHHcCCCEEEEECCCHHHHHHHHHHHHhhCC-CeEEEec-----cchH-------hh
Confidence            577899999987 8899999999999998 899999999998888887765443 2222211     1111       12


Q ss_pred             cCCccEEEEccccC
Q 044010          123 FGRLDHLVNNAGIS  136 (248)
Q Consensus       123 ~g~id~vv~~ag~~  136 (248)
                      ....|++||+....
T Consensus       190 ~~~aDiVInaTp~G  203 (284)
T PRK12549        190 LAAADGLVHATPTG  203 (284)
T ss_pred             hCCCCEEEECCcCC
Confidence            24689999996543

>TIGR02813 omega_3_PfaA polyketide-type polyunsaturated fatty acid synthase PfaA

Probab=97.48  E-value=0.0022  Score=69.29  Aligned_cols=177  Identities=11%  Similarity=0.081  Sum_probs=112.4

Q ss_pred             CCCCCEEEEcCCCChHHHHHHHHHHHcCCeEEEEeCCcchHHHHHHHHHhhCCCcEEEEEccCCCHHHHHHHHHHHHhHc
Q 044010           44 DVSGKVVIITGASSGIGEHLAYEYARRGACLALCARREKSLEEVADTAREIGSPDVITIRADVSKVDDCRSLVEETMNHF  123 (248)
Q Consensus        44 ~~~~k~~lVtGg~~gIG~aia~~l~~~G~~V~l~~r~~~~~~~~~~~l~~~~~~~v~~~~~D~~~~~~~~~~~~~~~~~~  123 (248)
                      .+.++..+|++.+++++.+++.+|.++|+.|+++..... .......+    +..+..+.+.-.|.+++..+++.+....
T Consensus      1752 ~~~~~~~~v~~d~~~~~~~L~~~L~~~G~~v~~~~~~~~-~~~~~~~~----~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 1826 (2582)
T TIGR02813      1752 KQSGANALVIDDDGHNAGVLAEKLIAAGWQVAVVRSPWV-VSHSASPL----ASAIASVTLGTIDDTSIEAVIKDIEEKT 1826 (2582)
T ss_pred             cccCceeEEEcCCcchHHHHHHHHHhCCCeEEEeecccc-cccccccc----ccccccccccccchHHHHHHHHhhhccc
Confidence            345788888888899999999999999999888743211 11110011    1123345666667788888888887777


Q ss_pred             CCccEEEEccccCCcccccccCChHHHHHHHHhhhHHHHHHHHHHhhhhhh-cCCeEEEEcCccccccCCCCccc-----
Q 044010          124 GRLDHLVNNAGISSVALFEDIVNITDFKQIMNINFWGSVYTTRFAVPHLRY-TKGKIVVLSSAASWLTAPRMSFY-----  197 (248)
Q Consensus       124 g~id~vv~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~-~~g~iV~isS~~~~~~~~~~~~Y-----  197 (248)
                      ++++.+||..+....... . .+.......-...+...+.+.|.+.+.+.. ..+.++.+|...|-.++......     
T Consensus      1827 ~~~~g~i~l~~~~~~~~~-~-~~~~~~~~~~~~~l~~~f~~ak~~~~~l~~~~~~~~~~vsr~~G~~g~~~~~~~~~~~~ 1904 (2582)
T TIGR02813      1827 AQIDGFIHLQPQHKSVAD-K-VDAIELPEAAKQSLMLAFLFAKLLNVKLATNARASFVTVSRIDGGFGYSNGDADSGTQQ 1904 (2582)
T ss_pred             cccceEEEeccccccccc-c-ccccccchhhHHHHHHHHHHHHhhchhhccCCCeEEEEEEecCCccccCCccccccccc
Confidence            899999998775532100 0 000011111123455577788887766543 34678888887766554332221     


Q ss_pred             ---hHHHHHHHHHHHHHHHHhCCC-eEEEEEecC
Q 044010          198 ---NASKAALVLFFETLRVELGSD-VGVTIVTPG  227 (248)
Q Consensus       198 ---~~sKaal~~l~~~la~~~~~~-i~v~~v~pg  227 (248)
                         ...++++.+|+|++++||..- +|...+.|.
T Consensus      1905 ~~~~~~~a~l~Gl~Ktl~~E~P~~~~r~vDl~~~ 1938 (2582)
T TIGR02813      1905 VKAELNQAALAGLTKTLNHEWNAVFCRALDLAPK 1938 (2582)
T ss_pred             cccchhhhhHHHHHHhHHHHCCCCeEEEEeCCCC
Confidence               346899999999999999542 666666664

Members of the seed for this alignment are involved in omega-3 polyunsaturated fatty acid biosynthesis, such as the protein PfaA from the eicosapentaenoic acid biosynthesis operon in Photobacterium profundum strain SS9. PfaA is encoded together with PfaB, PfaC, and PfaD, and the functions of the individual polypeptides have not yet been described. More distant homologs of PfaA, also included with the reach of this model, appear to be involved in polyketide-like biosynthetic mechanisms of polyunsaturated fatty acid biosynthesis, an alternative to the more familiar iterated mechanism of chain extension and desaturation, and in most cases are encoded near genes for homologs of PfaB, PfaC, and/or PfaD.

>PRK13940 glutamyl-tRNA reductase; Provisional

Probab=97.44  E-value=0.00058  Score=61.59  Aligned_cols=77  Identities=17%  Similarity=0.256  Sum_probs=55.6

Q ss_pred             cCCCCCEEEEcCCCChHHHHHHHHHHHcCC-eEEEEeCCcchHHHHHHHHHhhCCCcEEEEEccCCCHHHHHHHHHHHHh
Q 044010           43 EDVSGKVVIITGASSGIGEHLAYEYARRGA-CLALCARREKSLEEVADTAREIGSPDVITIRADVSKVDDCRSLVEETMN  121 (248)
Q Consensus        43 ~~~~~k~~lVtGg~~gIG~aia~~l~~~G~-~V~l~~r~~~~~~~~~~~l~~~~~~~v~~~~~D~~~~~~~~~~~~~~~~  121 (248)
                      .++++|+++|.|+ ||+|..+++.|++.|+ ++.++.|+.++.+...+++..     ..     +...+++       .+
T Consensus       177 ~~l~~kkvlviGa-G~~a~~va~~L~~~g~~~I~V~nRt~~ra~~La~~~~~-----~~-----~~~~~~l-------~~  238 (414)
T PRK13940        177 DNISSKNVLIIGA-GQTGELLFRHVTALAPKQIMLANRTIEKAQKITSAFRN-----AS-----AHYLSEL-------PQ  238 (414)
T ss_pred             cCccCCEEEEEcC-cHHHHHHHHHHHHcCCCEEEEECCCHHHHHHHHHHhcC-----Ce-----EecHHHH-------HH
Confidence            3688999999988 9999999999999997 799999998777666655421     11     1112222       23


Q ss_pred             HcCCccEEEEccccCC
Q 044010          122 HFGRLDHLVNNAGISS  137 (248)
Q Consensus       122 ~~g~id~vv~~ag~~~  137 (248)
                      .+.+.|++|++.+...
T Consensus       239 ~l~~aDiVI~aT~a~~  254 (414)
T PRK13940        239 LIKKADIIIAAVNVLE  254 (414)
T ss_pred             HhccCCEEEECcCCCC
Confidence            3347899999988643

>PRK14027 quinate/shikimate dehydrogenase; Provisional

Probab=97.43  E-value=0.0014  Score=56.10  Aligned_cols=81  Identities=19%  Similarity=0.333  Sum_probs=57.5

Q ss_pred             CCCCCEEEEcCCCChHHHHHHHHHHHcCC-eEEEEeCCcchHHHHHHHHHhhCCCcEEEEEccCCCHHHHHHHHHHHHhH
Q 044010           44 DVSGKVVIITGASSGIGEHLAYEYARRGA-CLALCARREKSLEEVADTAREIGSPDVITIRADVSKVDDCRSLVEETMNH  122 (248)
Q Consensus        44 ~~~~k~~lVtGg~~gIG~aia~~l~~~G~-~V~l~~r~~~~~~~~~~~l~~~~~~~v~~~~~D~~~~~~~~~~~~~~~~~  122 (248)
                      +.++|+++|.|+ ||-|++++..|++.|+ ++.+.+|+.++.++..+.+....+.... ...|   ..+..+.       
T Consensus       124 ~~~~k~vlilGa-GGaarAi~~aL~~~g~~~i~i~nR~~~ka~~La~~~~~~~~~~~~-~~~~---~~~~~~~-------  191 (283)
T PRK14027        124 NAKLDSVVQVGA-GGVGNAVAYALVTHGVQKLQVADLDTSRAQALADVINNAVGREAV-VGVD---ARGIEDV-------  191 (283)
T ss_pred             CcCCCeEEEECC-cHHHHHHHHHHHHCCCCEEEEEcCCHHHHHHHHHHHhhccCcceE-EecC---HhHHHHH-------
Confidence            567899999987 8999999999999998 7999999998888887776544332211 1122   2222111       


Q ss_pred             cCCccEEEEccccC
Q 044010          123 FGRLDHLVNNAGIS  136 (248)
Q Consensus       123 ~g~id~vv~~ag~~  136 (248)
                      ....|++||+....
T Consensus       192 ~~~~divINaTp~G  205 (283)
T PRK14027        192 IAAADGVVNATPMG  205 (283)
T ss_pred             HhhcCEEEEcCCCC
Confidence            12589999998754

>cd00704 MDH Malate dehydrogenase

Probab=97.42  E-value=0.0017  Score=56.80  Aligned_cols=109  Identities=17%  Similarity=0.154  Sum_probs=65.0

Q ss_pred             EEEEcCCCChHHHHHHHHHHHcCC-------eEEEEeCCc--chHHHHHHHHHhhCCCcEEEEEccCCCHHHH--H--HH
Q 044010           49 VVIITGASSGIGEHLAYEYARRGA-------CLALCARRE--KSLEEVADTAREIGSPDVITIRADVSKVDDC--R--SL  115 (248)
Q Consensus        49 ~~lVtGg~~gIG~aia~~l~~~G~-------~V~l~~r~~--~~~~~~~~~l~~~~~~~v~~~~~D~~~~~~~--~--~~  115 (248)
                      ++.|+|++|.+|..++..|+.+|.       ++++.++++  +.+               .....|+.|....  .  ..
T Consensus         2 KV~IiGAaG~VG~~~a~~L~~~~~~~~~~~~~l~L~Di~~~~~~~---------------~g~~~Dl~d~~~~~~~~~~i   66 (323)
T cd00704           2 HVLITGAAGQIGYNLLFLIASGELFGDDQPVILHLLDIPPAMKAL---------------EGVVMELQDCAFPLLKGVVI   66 (323)
T ss_pred             EEEEECCCcHHHHHHHHHHHhCCccCCCCceEEEEEecCCccCcc---------------ceeeeehhhhcccccCCcEE
Confidence            578999999999999999998663       499999986  322               2334444443100  0  00


Q ss_pred             HHHHHhHcCCccEEEEccccCCcccccccCChHHHHHHHHhhhHHHHHHHHHHhhhhhhc---CCeEEEEc
Q 044010          116 VEETMNHFGRLDHLVNNAGISSVALFEDIVNITDFKQIMNINFWGSVYTTRFAVPHLRYT---KGKIVVLS  183 (248)
Q Consensus       116 ~~~~~~~~g~id~vv~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~---~g~iV~is  183 (248)
                      -....+.+.+.|++|+.||.....   .    ++-.+.+..|..-    ++.+.+.+.+.   .+.++++|
T Consensus        67 ~~~~~~~~~~aDiVVitAG~~~~~---g----~tR~dll~~N~~i----~~~i~~~i~~~~~~~~iiivvs  126 (323)
T cd00704          67 TTDPEEAFKDVDVAILVGAFPRKP---G----MERADLLRKNAKI----FKEQGEALNKVAKPTVKVLVVG  126 (323)
T ss_pred             ecChHHHhCCCCEEEEeCCCCCCc---C----CcHHHHHHHhHHH----HHHHHHHHHHhCCCCeEEEEeC
Confidence            012234456899999999975322   1    2233455555544    45555555433   35666665

Malate dehydrogenase (MDH) is one of the key enzymes in the citric acid cycle, facilitating both the conversion of malate to oxaloacetate and replenishing levels of oxalacetate by reductive carboxylation of pyruvate. MDHs belong to the NAD-dependent, lactate dehydrogenase (LDH)-like, 2-hydroxycarboxylate dehydrogenase family, which also includes the GH4 family of glycoside hydrolases. They are part of the NAD(P)-binding Rossmann fold superfamily, which includes a wide variety of protein families including the NAD(P)-binding domains of alcohol dehydrogenases, tyrosine-dependent oxidoreductases, glyceraldehyde-3-phosphate dehydrogenases, formate/glycerate dehydrogenases, siroheme synthases, 6-phosphogluconate dehydrogenases, aminoacid dehydrogenases, repressor rex, and NAD-binding potassium channel domains, among others.

>KOG2774 consensus NAD dependent epimerase [General function prediction only]

Probab=97.41  E-value=0.00026  Score=58.19  Aligned_cols=162  Identities=24%  Similarity=0.306  Sum_probs=106.9

Q ss_pred             CCCCCEEEEcCCCChHHHHHHHHHHHc-CC-eEEEEeCCcchHHHHHHHHHhhCCCcEEEEEccCCCHHHHHHHHHHHHh
Q 044010           44 DVSGKVVIITGASSGIGEHLAYEYARR-GA-CLALCARREKSLEEVADTAREIGSPDVITIRADVSKVDDCRSLVEETMN  121 (248)
Q Consensus        44 ~~~~k~~lVtGg~~gIG~aia~~l~~~-G~-~V~l~~r~~~~~~~~~~~l~~~~~~~v~~~~~D~~~~~~~~~~~~~~~~  121 (248)
                      +-+..++||||+-|-+|..+|+.|-.+ |. +|++.+...+. +...    +.+    -++-.|+-|..++++.+-.   
T Consensus        41 ~~~~PrvLITG~LGQLG~~~A~LLR~~yGs~~VILSDI~KPp-~~V~----~~G----PyIy~DILD~K~L~eIVVn---  108 (366)
T KOG2774|consen   41 TQKAPRVLITGSLGQLGRGLASLLRYMYGSECVILSDIVKPP-ANVT----DVG----PYIYLDILDQKSLEEIVVN---  108 (366)
T ss_pred             cCCCCeEEEecchHHHhHHHHHHHHHHhCCccEehhhccCCc-hhhc----ccC----CchhhhhhccccHHHhhcc---
Confidence            445678999999999999999988865 76 56665554332 2211    112    2566788888888877653   


Q ss_pred             HcCCccEEEEccccCCcccccccCChHHHHHHHHhhhHHHHHHHHHHhhhhhhcCCeEEEEcCccccccCC---------
Q 044010          122 HFGRLDHLVNNAGISSVALFEDIVNITDFKQIMNINFWGSVYTTRFAVPHLRYTKGKIVVLSSAASWLTAP---------  192 (248)
Q Consensus       122 ~~g~id~vv~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~g~iV~isS~~~~~~~~---------  192 (248)
                        .+||-++|-.+..+.-.      ....--...+|..|..++++.+.++    +=++..-|+..++.|..         
T Consensus       109 --~RIdWL~HfSALLSAvG------E~NVpLA~~VNI~GvHNil~vAa~~----kL~iFVPSTIGAFGPtSPRNPTPdlt  176 (366)
T KOG2774|consen  109 --KRIDWLVHFSALLSAVG------ETNVPLALQVNIRGVHNILQVAAKH----KLKVFVPSTIGAFGPTSPRNPTPDLT  176 (366)
T ss_pred             --cccceeeeHHHHHHHhc------ccCCceeeeecchhhhHHHHHHHHc----CeeEeecccccccCCCCCCCCCCCee
Confidence              37999999877543211      1112234568999998888886544    33455556666665432         


Q ss_pred             ---CCccchHHHHHHHHHHHHHHHHhCCCeEEEEEecCccc
Q 044010          193 ---RMSFYNASKAALVLFFETLRVELGSDVGVTIVTPGFIE  230 (248)
Q Consensus       193 ---~~~~Y~~sKaal~~l~~~la~~~~~~i~v~~v~pg~v~  230 (248)
                         +...||.||.--+-+...+...++-+.|+.- .||.+.
T Consensus       177 IQRPRTIYGVSKVHAEL~GEy~~hrFg~dfr~~r-fPg~is  216 (366)
T KOG2774|consen  177 IQRPRTIYGVSKVHAELLGEYFNHRFGVDFRSMR-FPGIIS  216 (366)
T ss_pred             eecCceeechhHHHHHHHHHHHHhhcCccceecc-cCcccc
Confidence               1246999999999999999999874444321 355543

>PRK06849 hypothetical protein; Provisional

Probab=97.40  E-value=0.002  Score=57.64  Aligned_cols=83  Identities=19%  Similarity=0.203  Sum_probs=54.3

Q ss_pred             CCCEEEEcCCCChHHHHHHHHHHHcCCeEEEEeCCcchHHHHHHHHHhhCCCcEEEEEccCCCHHHHHHHHHHHHhHcCC
Q 044010           46 SGKVVIITGASSGIGEHLAYEYARRGACLALCARREKSLEEVADTAREIGSPDVITIRADVSKVDDCRSLVEETMNHFGR  125 (248)
Q Consensus        46 ~~k~~lVtGg~~gIG~aia~~l~~~G~~V~l~~r~~~~~~~~~~~l~~~~~~~v~~~~~D~~~~~~~~~~~~~~~~~~g~  125 (248)
                      +.|++||||++..+|.++++.|.+.|++|++++.+...........     ++...+...-.+.+...+.+.++.++. +
T Consensus         3 ~~~~VLI~G~~~~~~l~iar~l~~~G~~Vi~~d~~~~~~~~~s~~~-----d~~~~~p~p~~d~~~~~~~L~~i~~~~-~   76 (389)
T PRK06849          3 TKKTVLITGARAPAALELARLFHNAGHTVILADSLKYPLSRFSRAV-----DGFYTIPSPRWDPDAYIQALLSIVQRE-N   76 (389)
T ss_pred             CCCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEeCCchHHHHHHHhh-----hheEEeCCCCCCHHHHHHHHHHHHHHc-C
Confidence            4689999999999999999999999999999999865433221111     122222212234444444444444443 5


Q ss_pred             ccEEEEccc
Q 044010          126 LDHLVNNAG  134 (248)
Q Consensus       126 id~vv~~ag  134 (248)
                      +|++|....
T Consensus        77 id~vIP~~e   85 (389)
T PRK06849         77 IDLLIPTCE   85 (389)
T ss_pred             CCEEEECCh
Confidence            899988765

>cd05291 HicDH_like L-2-hydroxyisocapronate dehydrogenases and some bacterial L-lactate dehydrogenases

Probab=97.40  E-value=0.0052  Score=53.27  Aligned_cols=113  Identities=20%  Similarity=0.149  Sum_probs=70.2

Q ss_pred             CEEEEcCCCChHHHHHHHHHHHcC--CeEEEEeCCcchHHHHHHHHHhhC---CCcEEEEEccCCCHHHHHHHHHHHHhH
Q 044010           48 KVVIITGASSGIGEHLAYEYARRG--ACLALCARREKSLEEVADTAREIG---SPDVITIRADVSKVDDCRSLVEETMNH  122 (248)
Q Consensus        48 k~~lVtGg~~gIG~aia~~l~~~G--~~V~l~~r~~~~~~~~~~~l~~~~---~~~v~~~~~D~~~~~~~~~~~~~~~~~  122 (248)
                      +++.|.|+ |++|.+++..|+.+|  .+|++.++++++.+.....+.+..   +.......   .+.+.           
T Consensus         1 ~kI~IIGa-G~vG~~~a~~l~~~g~~~ei~l~D~~~~~~~~~a~dL~~~~~~~~~~~~i~~---~~~~~-----------   65 (306)
T cd05291           1 RKVVIIGA-GHVGSSFAYSLVNQGIADELVLIDINEEKAEGEALDLEDALAFLPSPVKIKA---GDYSD-----------   65 (306)
T ss_pred             CEEEEECC-CHHHHHHHHHHHhcCCCCEEEEEeCCcchhhHhHhhHHHHhhccCCCeEEEc---CCHHH-----------
Confidence            35778886 899999999999999  589999999988887777775442   11222221   22221           


Q ss_pred             cCCccEEEEccccCCcccccccCChHHHHHHHHhhhHHHHHHHHHHhhhhhhcCCeEEEEcC
Q 044010          123 FGRLDHLVNNAGISSVALFEDIVNITDFKQIMNINFWGSVYTTRFAVPHLRYTKGKIVVLSS  184 (248)
Q Consensus       123 ~g~id~vv~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~g~iV~isS  184 (248)
                      ..+.|++|+++|.....   . .+   -.+.+..|..-.-.+.+.+.+.  ..++.++++|.
T Consensus        66 l~~aDIVIitag~~~~~---g-~~---R~dll~~N~~i~~~~~~~i~~~--~~~~~vivvsN  118 (306)
T cd05291          66 CKDADIVVITAGAPQKP---G-ET---RLDLLEKNAKIMKSIVPKIKAS--GFDGIFLVASN  118 (306)
T ss_pred             hCCCCEEEEccCCCCCC---C-CC---HHHHHHHHHHHHHHHHHHHHHh--CCCeEEEEecC
Confidence            24799999999975322   1 12   2344454554444444443322  12467777774

L-2-hydroxyisocapronate dehydrogenase (HicDH) catalyzes the conversion of a variety of 2-oxo carboxylic acids with medium-sized aliphatic or aromatic side chains. This subfamily is composed of HicDHs and some bacterial L-lactate dehydrogenases (LDH). LDHs catalyze the last step of glycolysis in which pyruvate is converted to L-lactate. Bacterial LDHs can be non-allosteric or may be activated by an allosteric effector such as fructose-1,6-bisphosphate. Members of this subfamily with known structures such as the HicDH of Lactobacillus confusus, the non-allosteric LDH of Lactobacillus pentosus, and the allosteric LDH of Bacillus stearothermophilus, show that they exist as homotetramers. The HicDH-like subfamily is part of the NAD(P)-binding Rossmann fold superfamily, which includes a wide variety of protein families including the NAD(P)-binding domains of alcohol dehydrogenases, tyrosine

>TIGR01809 Shik-DH-AROM shikimate-5-dehydrogenase, fungal AROM-type

Probab=97.40  E-value=0.00097  Score=57.17  Aligned_cols=80  Identities=18%  Similarity=0.255  Sum_probs=56.5

Q ss_pred             CCCCCEEEEcCCCChHHHHHHHHHHHcCC-eEEEEeCCcchHHHHHHHHHhhCCCcEEEEEccCCCHHHHHHHHHHHHhH
Q 044010           44 DVSGKVVIITGASSGIGEHLAYEYARRGA-CLALCARREKSLEEVADTAREIGSPDVITIRADVSKVDDCRSLVEETMNH  122 (248)
Q Consensus        44 ~~~~k~~lVtGg~~gIG~aia~~l~~~G~-~V~l~~r~~~~~~~~~~~l~~~~~~~v~~~~~D~~~~~~~~~~~~~~~~~  122 (248)
                      ++++|+++|.|+ ||.|++++..|++.|+ +|.++.|+.++.++..+.+....  .+  ..  +...++.       .+.
T Consensus       122 ~~~~k~vlvlGa-GGaarai~~aL~~~G~~~i~I~nRt~~ka~~La~~~~~~~--~~--~~--~~~~~~~-------~~~  187 (282)
T TIGR01809       122 PLAGFRGLVIGA-GGTSRAAVYALASLGVTDITVINRNPDKLSRLVDLGVQVG--VI--TR--LEGDSGG-------LAI  187 (282)
T ss_pred             ccCCceEEEEcC-cHHHHHHHHHHHHcCCCeEEEEeCCHHHHHHHHHHhhhcC--cc--ee--ccchhhh-------hhc
Confidence            578999999976 9999999999999998 79999999988888777654322  11  11  1111111       122


Q ss_pred             cCCccEEEEccccCC
Q 044010          123 FGRLDHLVNNAGISS  137 (248)
Q Consensus       123 ~g~id~vv~~ag~~~  137 (248)
                      ....|++||+.+...
T Consensus       188 ~~~~DiVInaTp~g~  202 (282)
T TIGR01809       188 EKAAEVLVSTVPADV  202 (282)
T ss_pred             ccCCCEEEECCCCCC
Confidence            247899999987654

This model represents a clade of shikimate-5-dehydrogenases found in Corynebacterium, Mycobacteria and fungi. The fungal sequences are pentafunctional proteins known as AroM which contain the central five seven steps in the chorismate biosynthesis pathway. The Corynebacterium and Mycobacterial sequences represent the sole shikimate-5-dehydrogenases in species which otherwise have every enzyme of the chorismate biosynthesis pathway.

>PRK12475 thiamine/molybdopterin biosynthesis MoeB-like protein; Provisional

Probab=97.38  E-value=0.0017  Score=57.02  Aligned_cols=82  Identities=23%  Similarity=0.392  Sum_probs=59.4

Q ss_pred             cCCCCCEEEEcCCCChHHHHHHHHHHHcCC-eEEEEeCCc---------------------chHHHHHHHHHhhCC-CcE
Q 044010           43 EDVSGKVVIITGASSGIGEHLAYEYARRGA-CLALCARRE---------------------KSLEEVADTAREIGS-PDV   99 (248)
Q Consensus        43 ~~~~~k~~lVtGg~~gIG~aia~~l~~~G~-~V~l~~r~~---------------------~~~~~~~~~l~~~~~-~~v   99 (248)
                      ..+++++++|.|+ ||+|.++++.|+..|. ++.++|++.                     .+.+.+.+.+++..+ .++
T Consensus        20 ~~L~~~~VlIiG~-GglGs~va~~La~aGvg~i~lvD~D~ve~sNL~RQ~l~~~~d~~~g~~Ka~aa~~~l~~inp~v~i   98 (338)
T PRK12475         20 RKIREKHVLIVGA-GALGAANAEALVRAGIGKLTIADRDYVEWSNLQRQQLYTEEDAKQKKPKAIAAKEHLRKINSEVEI   98 (338)
T ss_pred             HhhcCCcEEEECC-CHHHHHHHHHHHHcCCCEEEEEcCCcccccccCccccccHHHccCCccHHHHHHHHHHHHCCCcEE
Confidence            4788999999987 8899999999999998 899999974                     345556667776643 345


Q ss_pred             EEEEccCCCHHHHHHHHHHHHhHcCCccEEEEcc
Q 044010          100 ITIRADVSKVDDCRSLVEETMNHFGRLDHLVNNA  133 (248)
Q Consensus       100 ~~~~~D~~~~~~~~~~~~~~~~~~g~id~vv~~a  133 (248)
                      ..+..|++. +.+++++       .+.|++|.+.
T Consensus        99 ~~~~~~~~~-~~~~~~~-------~~~DlVid~~  124 (338)
T PRK12475         99 VPVVTDVTV-EELEELV-------KEVDLIIDAT  124 (338)
T ss_pred             EEEeccCCH-HHHHHHh-------cCCCEEEEcC
Confidence            566667753 3344432       3578887765

>PRK15116 sulfur acceptor protein CsdL; Provisional

Probab=97.34  E-value=0.0044  Score=52.57  Aligned_cols=142  Identities=17%  Similarity=0.220  Sum_probs=80.1

Q ss_pred             ccCCCCCEEEEcCCCChHHHHHHHHHHHcCC-eEEEEeCCcc-------------------hHHHHHHHHHhhCC-CcEE
Q 044010           42 SEDVSGKVVIITGASSGIGEHLAYEYARRGA-CLALCARREK-------------------SLEEVADTAREIGS-PDVI  100 (248)
Q Consensus        42 ~~~~~~k~~lVtGg~~gIG~aia~~l~~~G~-~V~l~~r~~~-------------------~~~~~~~~l~~~~~-~~v~  100 (248)
                      ...+++.+++|.|+ ||+|..+|+.|+..|. ++.+++.+.-                   +.+...+.+.+..+ .++.
T Consensus        25 ~~kL~~s~VlVvG~-GGVGs~vae~Lar~GVg~itLiD~D~V~~sNlnRQ~~~~~~~vG~~Kve~~~~rl~~INP~~~V~  103 (268)
T PRK15116         25 LQLFADAHICVVGI-GGVGSWAAEALARTGIGAITLIDMDDVCVTNTNRQIHALRDNVGLAKAEVMAERIRQINPECRVT  103 (268)
T ss_pred             HHHhcCCCEEEECc-CHHHHHHHHHHHHcCCCEEEEEeCCEecccccccccccChhhcChHHHHHHHHHHHhHCCCcEEE
Confidence            35789999999977 7999999999999995 8999987642                   12223333333332 1222


Q ss_pred             EEEccCCCHHHHHHHHHHHHhHcCCccEEEEccccCCcccccccCChHHHHHHHHhhhHHHHHHHHHHhhhhhhcCCeEE
Q 044010          101 TIRADVSKVDDCRSLVEETMNHFGRLDHLVNNAGISSVALFEDIVNITDFKQIMNINFWGSVYTTRFAVPHLRYTKGKIV  180 (248)
Q Consensus       101 ~~~~D~~~~~~~~~~~~~~~~~~g~id~vv~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~g~iV  180 (248)
                      .+ -+.-+.+..++++.      .+.|++|.+....                      ..-..+.+.+    .+.+-.+|
T Consensus       104 ~i-~~~i~~e~~~~ll~------~~~D~VIdaiD~~----------------------~~k~~L~~~c----~~~~ip~I  150 (268)
T PRK15116        104 VV-DDFITPDNVAEYMS------AGFSYVIDAIDSV----------------------RPKAALIAYC----RRNKIPLV  150 (268)
T ss_pred             EE-ecccChhhHHHHhc------CCCCEEEEcCCCH----------------------HHHHHHHHHH----HHcCCCEE
Confidence            22 11212233322221      1455555554321                      1111122222    22233466


Q ss_pred             EEcCccccccCCCCccchHHHHHHHHHHHHHHHHhCC
Q 044010          181 VLSSAASWLTAPRMSFYNASKAALVLFFETLRVELGS  217 (248)
Q Consensus       181 ~isS~~~~~~~~~~~~Y~~sKaal~~l~~~la~~~~~  217 (248)
                      .....++.......-.-..+|.....|++.+++++++
T Consensus       151 ~~gGag~k~dp~~~~~~di~~t~~~pla~~~R~~lr~  187 (268)
T PRK15116        151 TTGGAGGQIDPTQIQVVDLAKTIQDPLAAKLRERLKS  187 (268)
T ss_pred             EECCcccCCCCCeEEEEeeecccCChHHHHHHHHHHH
Confidence            5555444444333456678888889999999999965

>TIGR02356 adenyl_thiF thiazole biosynthesis adenylyltransferase ThiF, E

Probab=97.33  E-value=0.003  Score=51.44  Aligned_cols=82  Identities=22%  Similarity=0.372  Sum_probs=56.4

Q ss_pred             cCCCCCEEEEcCCCChHHHHHHHHHHHcCC-eEEEEeCCc-------------------chHHHHHHHHHhhCC-CcEEE
Q 044010           43 EDVSGKVVIITGASSGIGEHLAYEYARRGA-CLALCARRE-------------------KSLEEVADTAREIGS-PDVIT  101 (248)
Q Consensus        43 ~~~~~k~~lVtGg~~gIG~aia~~l~~~G~-~V~l~~r~~-------------------~~~~~~~~~l~~~~~-~~v~~  101 (248)
                      .++++++++|.|. ||+|..+++.|+..|. ++.+++++.                   .+.+.+.+.+++..+ .++..
T Consensus        17 ~kl~~~~VlviG~-GglGs~ia~~La~~Gv~~i~lvD~d~ve~sNL~Rq~l~~~~diG~~Ka~~~~~~l~~~np~v~i~~   95 (202)
T TIGR02356        17 QRLLNSHVLIIGA-GGLGSPAALYLAGAGVGTIVIVDDDHVDLSNLQRQILFTEEDVGRPKVEVAAQRLRELNSDIQVTA   95 (202)
T ss_pred             HHhcCCCEEEECC-CHHHHHHHHHHHHcCCCeEEEecCCEEcccchhhhhccChhhCCChHHHHHHHHHHHhCCCCEEEE
Confidence            4788999999985 8999999999999998 899999873                   345555666666543 23344


Q ss_pred             EEccCCCHHHHHHHHHHHHhHcCCccEEEEcc
Q 044010          102 IRADVSKVDDCRSLVEETMNHFGRLDHLVNNA  133 (248)
Q Consensus       102 ~~~D~~~~~~~~~~~~~~~~~~g~id~vv~~a  133 (248)
                      +..++.+ +.+.++       +.+.|++|.+.
T Consensus        96 ~~~~i~~-~~~~~~-------~~~~D~Vi~~~  119 (202)
T TIGR02356        96 LKERVTA-ENLELL-------INNVDLVLDCT  119 (202)
T ss_pred             ehhcCCH-HHHHHH-------HhCCCEEEECC
Confidence            4444432 233332       23688888775

coli subfamily. Members of the HesA/MoeB/ThiF family of proteins (pfam00899) include a number of members encoded in the midst of thiamine biosynthetic operons. This mix of known and putative ThiF proteins shows a deep split in phylogenetic trees, with the Escherichia. coli ThiF and the E. coli MoeB proteins seemingly more closely related than E. coli ThiF and Campylobacter (for example) ThiF. This model represents the more widely distributed clade of ThiF proteins such found in E. coli.

>PF00056 Ldh_1_N: lactate/malate dehydrogenase, NAD binding domain Prosite entry for lactate dehydrogenase Prosite entry for malate dehydrogenase; InterPro: IPR001236 L-lactate dehydrogenases are metabolic enzymes which catalyse the conversion of L-lactate to pyruvate, the last step in anaerobic glycolysis []

Probab=97.31  E-value=0.005  Score=47.16  Aligned_cols=112  Identities=18%  Similarity=0.169  Sum_probs=71.0

Q ss_pred             EEEEcCCCChHHHHHHHHHHHcCC--eEEEEeCCcchHHHHHHHHHhhC---CCcEEEEEccCCCHHHHHHHHHHHHhHc
Q 044010           49 VVIITGASSGIGEHLAYEYARRGA--CLALCARREKSLEEVADTAREIG---SPDVITIRADVSKVDDCRSLVEETMNHF  123 (248)
Q Consensus        49 ~~lVtGg~~gIG~aia~~l~~~G~--~V~l~~r~~~~~~~~~~~l~~~~---~~~v~~~~~D~~~~~~~~~~~~~~~~~~  123 (248)
                      ++.|+|++|.+|.+++..|..+|.  ++++.++++++++.....+....   ........   .+.+           .+
T Consensus         2 KV~IiGa~G~VG~~~a~~l~~~~l~~ei~L~D~~~~~~~g~a~Dl~~~~~~~~~~~~i~~---~~~~-----------~~   67 (141)
T PF00056_consen    2 KVAIIGAAGNVGSTLALLLAQQGLADEIVLIDINEDKAEGEALDLSHASAPLPSPVRITS---GDYE-----------AL   67 (141)
T ss_dssp             EEEEESTTSHHHHHHHHHHHHTTTSSEEEEEESSHHHHHHHHHHHHHHHHGSTEEEEEEE---SSGG-----------GG
T ss_pred             EEEEECCCChHHHHHHHHHHhCCCCCceEEeccCcccceeeehhhhhhhhhccccccccc---cccc-----------cc
Confidence            578999999999999999999865  89999999887777766665532   11222332   3332           23


Q ss_pred             CCccEEEEccccCCcccccccCChHHHHHHHHhhhHHHHHHHHHHhhhhhhcCCeEEEEc
Q 044010          124 GRLDHLVNNAGISSVALFEDIVNITDFKQIMNINFWGSVYTTRFAVPHLRYTKGKIVVLS  183 (248)
Q Consensus       124 g~id~vv~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~g~iV~is  183 (248)
                      .+-|++|..+|.....   . .+   -.+.++.|..-.-.+.+.+.++-  .++.++.+|
T Consensus        68 ~~aDivvitag~~~~~---g-~s---R~~ll~~N~~i~~~~~~~i~~~~--p~~~vivvt  118 (141)
T PF00056_consen   68 KDADIVVITAGVPRKP---G-MS---RLDLLEANAKIVKEIAKKIAKYA--PDAIVIVVT  118 (141)
T ss_dssp             TTESEEEETTSTSSST---T-SS---HHHHHHHHHHHHHHHHHHHHHHS--TTSEEEE-S
T ss_pred             ccccEEEEeccccccc---c-cc---HHHHHHHhHhHHHHHHHHHHHhC--CccEEEEeC
Confidence            4799999999975321   1 12   33445556555544444443331  236666665

L-lactate dehydrogenase is also found as a lens crystallin in bird and crocodile eyes. L-2-hydroxyisocaproate dehydrogenases are also members of the family. Malate dehydrogenases catalyse the interconversion of malate to oxaloacetate []. The enzyme participates in the citric acid cycle. This entry represents the N-terminal, and is thought to be a Rossmann NAD-binding fold.; GO: 0016491 oxidoreductase activity, 0055114 oxidation-reduction process; PDB: 1IB6_B 3HHP_C 1IE3_A 2PWZ_A 1EMD_A 2CMD_A 1EZ4_D 9LDT_B 9LDB_B 2D4A_C ....

>TIGR01758 MDH_euk_cyt malate dehydrogenase, NAD-dependent

Probab=97.30  E-value=0.0022  Score=56.04  Aligned_cols=112  Identities=15%  Similarity=0.077  Sum_probs=67.7

Q ss_pred             EEEEcCCCChHHHHHHHHHHHcCC-------eEEEEeCCcchHHHHHHHHHhhCCCcEEEEEccCCCHHHHH--HH--HH
Q 044010           49 VVIITGASSGIGEHLAYEYARRGA-------CLALCARREKSLEEVADTAREIGSPDVITIRADVSKVDDCR--SL--VE  117 (248)
Q Consensus        49 ~~lVtGg~~gIG~aia~~l~~~G~-------~V~l~~r~~~~~~~~~~~l~~~~~~~v~~~~~D~~~~~~~~--~~--~~  117 (248)
                      ++.|+|++|.+|.+++..|+.+|.       ++++.+++++.-             .......|+.|.....  ..  -.
T Consensus         1 ~V~IiGaaG~VG~~~a~~l~~~~~~~~~~e~el~LiD~~~~~~-------------~a~g~~~Dl~d~~~~~~~~~~~~~   67 (324)
T TIGR01758         1 RVVVTGAAGQIGYALLPMIARGRMLGKDQPIILHLLDIPPAMK-------------VLEGVVMELMDCAFPLLDGVVPTH   67 (324)
T ss_pred             CEEEECCCcHHHHHHHHHHHhccccCCCCccEEEEEecCCccc-------------ccceeEeehhcccchhcCceeccC
Confidence            478999999999999999998654       599999965420             1223445555544110  00  00


Q ss_pred             HHHhHcCCccEEEEccccCCcccccccCChHHHHHHHHhhhHHHHHHHHHHhhhhhhc---CCeEEEEcC
Q 044010          118 ETMNHFGRLDHLVNNAGISSVALFEDIVNITDFKQIMNINFWGSVYTTRFAVPHLRYT---KGKIVVLSS  184 (248)
Q Consensus       118 ~~~~~~g~id~vv~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~---~g~iV~isS  184 (248)
                      ...+.+.+.|++|++||.....       .+++.+.+..|+.-.    +.+.+.+.+.   ++.++++|.
T Consensus        68 ~~~~~~~~aDiVVitAG~~~~~-------~~tr~~ll~~N~~i~----k~i~~~i~~~~~~~~iiivvsN  126 (324)
T TIGR01758        68 DPAVAFTDVDVAILVGAFPRKE-------GMERRDLLSKNVKIF----KEQGRALDKLAKKDCKVLVVGN  126 (324)
T ss_pred             ChHHHhCCCCEEEEcCCCCCCC-------CCcHHHHHHHHHHHH----HHHHHHHHhhCCCCeEEEEeCC
Confidence            1234456899999999975321       133556666666554    5555544432   356666663

This model represents the NAD-dependent cytosolic malate dehydrogenase from eukaryotes. The enzyme from pig has been studied by X-ray crystallography

>cd01075 NAD_bind_Leu_Phe_Val_DH NAD(P) binding domain of leucine dehydrogenase, phenylalanine dehydrogenase, and valine dehydrogenase

Probab=97.28  E-value=0.00043  Score=56.32  Aligned_cols=48  Identities=25%  Similarity=0.414  Sum_probs=41.0

Q ss_pred             ccCCCCCEEEEcCCCChHHHHHHHHHHHcCCeEEEEeCCcchHHHHHHH
Q 044010           42 SEDVSGKVVIITGASSGIGEHLAYEYARRGACLALCARREKSLEEVADT   90 (248)
Q Consensus        42 ~~~~~~k~~lVtGg~~gIG~aia~~l~~~G~~V~l~~r~~~~~~~~~~~   90 (248)
                      ..+++||+++|+|.+ .+|..+++.|.+.|++|++.+++.++.+...+.
T Consensus        23 ~~~l~gk~v~I~G~G-~vG~~~A~~L~~~G~~Vvv~D~~~~~~~~~~~~   70 (200)
T cd01075          23 TDSLEGKTVAVQGLG-KVGYKLAEHLLEEGAKLIVADINEEAVARAAEL   70 (200)
T ss_pred             CCCCCCCEEEEECCC-HHHHHHHHHHHHCCCEEEEEcCCHHHHHHHHHH
Confidence            568999999999985 899999999999999999999987665555443

Amino acid dehydrogenase (DH) is a widely distributed family of enzymes that catalyzes the oxidative deamination of an amino acid to its keto acid and ammonia with concomitant reduction of NADP+. For example, leucine DH catalyzes the reversible oxidative deamination of L-leucine and several other straight or branched chain amino acids to the corresponding 2-oxoacid derivative. Amino acid DH -like NAD(P)-binding domains are members of the Rossmann fold superfamily and include glutamate, leucine, and phenylalanine DHs, methylene tetrahydrofolate DH, methylene-tetrahydromethanopterin DH, methylene-tetrahydropholate DH/cyclohydrolase, Shikimate DH-like proteins, malate oxidoreductases, and glutamyl tRNA reductase. Amino acid DHs catalyze the deamination of amino acids to keto acids with NAD(P)+ as a cofactor. The NAD(P)-binding Rossmann fold superfamily inc

>cd00755 YgdL_like Family of activating enzymes (E1) of ubiquitin-like proteins related to the E

Probab=97.27  E-value=0.004  Score=51.77  Aligned_cols=148  Identities=22%  Similarity=0.250  Sum_probs=84.8

Q ss_pred             cCCCCCEEEEcCCCChHHHHHHHHHHHcCC-eEEEEeCCcc-------------------hHHHHHHHHHhhCC-CcEEE
Q 044010           43 EDVSGKVVIITGASSGIGEHLAYEYARRGA-CLALCARREK-------------------SLEEVADTAREIGS-PDVIT  101 (248)
Q Consensus        43 ~~~~~k~~lVtGg~~gIG~aia~~l~~~G~-~V~l~~r~~~-------------------~~~~~~~~l~~~~~-~~v~~  101 (248)
                      ..+++++++|.|. ||+|..+++.|+..|. ++.++|.+.-                   +.+...+.+++..+ .++..
T Consensus         7 ~~L~~~~VlVvG~-GGvGs~va~~Lar~GVg~i~LvD~D~V~~sNlnRq~~~~~~diG~~Kae~~~~~l~~inP~~~V~~   85 (231)
T cd00755           7 EKLRNAHVAVVGL-GGVGSWAAEALARSGVGKLTLIDFDVVCVSNLNRQIHALLSTVGKPKVEVMAERIRDINPECEVDA   85 (231)
T ss_pred             HHHhCCCEEEECC-CHHHHHHHHHHHHcCCCEEEEECCCEECchhhcchhCcChhhCCCcHHHHHHHHHHHHCCCcEEEE
Confidence            3678889999977 8999999999999998 8999987542                   33444445554443 23333


Q ss_pred             EEccCCCHHHHHHHHHHHHhHcCCccEEEEccccCCcccccccCChHHHHHHHHhhhHHHHHHHHHHhhhhhhcCCeEEE
Q 044010          102 IRADVSKVDDCRSLVEETMNHFGRLDHLVNNAGISSVALFEDIVNITDFKQIMNINFWGSVYTTRFAVPHLRYTKGKIVV  181 (248)
Q Consensus       102 ~~~D~~~~~~~~~~~~~~~~~~g~id~vv~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~g~iV~  181 (248)
                      +...++ .+...+++.      .++|++|.+....                      ..-..+.+.+.    +.+-.+|.
T Consensus        86 ~~~~i~-~~~~~~l~~------~~~D~VvdaiD~~----------------------~~k~~L~~~c~----~~~ip~I~  132 (231)
T cd00755          86 VEEFLT-PDNSEDLLG------GDPDFVVDAIDSI----------------------RAKVALIAYCR----KRKIPVIS  132 (231)
T ss_pred             eeeecC-HhHHHHHhc------CCCCEEEEcCCCH----------------------HHHHHHHHHHH----HhCCCEEE
Confidence            333333 222322221      2467666663211                      11112223332    12224555


Q ss_pred             EcCccccccCCCCccchHHHHHHHHHHHHHHHHhCC-CeE--EEEE
Q 044010          182 LSSAASWLTAPRMSFYNASKAALVLFFETLRVELGS-DVG--VTIV  224 (248)
Q Consensus       182 isS~~~~~~~~~~~~Y~~sKaal~~l~~~la~~~~~-~i~--v~~v  224 (248)
                      ..+.++.........-..+|.....|++.+++++.+ +++  +-+|
T Consensus       133 s~g~g~~~dp~~i~i~di~~t~~~pla~~~R~~Lrk~~~~~~~~~v  178 (231)
T cd00755         133 SMGAGGKLDPTRIRVADISKTSGDPLARKVRKRLRKRGIFFGVPVV  178 (231)
T ss_pred             EeCCcCCCCCCeEEEccEeccccCcHHHHHHHHHHHcCCCCCeEEE
Confidence            444444333333455677788888999999999965 353  5554

coli hypothetical protein ygdL. The common reaction mechanism catalyzed by E1-like enzymes begins with a nucleophilic attack of the C-terminal carboxylate of the ubiquitin-like substrate, on the alpha-phosphate of an ATP molecule bound at the active site of the activating enzymes, leading to the formation of a high-energy acyladenylate intermediate and subsequently to the formation of a thiocarboxylate at the C termini of the substrate. The exact function of this family is unknown.

>PRK12749 quinate/shikimate dehydrogenase; Reviewed

Probab=97.26  E-value=0.0019  Score=55.54  Aligned_cols=84  Identities=21%  Similarity=0.286  Sum_probs=54.6

Q ss_pred             cCCCCCEEEEcCCCChHHHHHHHHHHHcCC-eEEEEeCCcc---hHHHHHHHHHhhCCCcEEEEEccCCCHHHHHHHHHH
Q 044010           43 EDVSGKVVIITGASSGIGEHLAYEYARRGA-CLALCARREK---SLEEVADTAREIGSPDVITIRADVSKVDDCRSLVEE  118 (248)
Q Consensus        43 ~~~~~k~~lVtGg~~gIG~aia~~l~~~G~-~V~l~~r~~~---~~~~~~~~l~~~~~~~v~~~~~D~~~~~~~~~~~~~  118 (248)
                      .++++|+++|.|+ ||-+++++..|++.|. +|.+..|+.+   +.++..+.+.......+...  +..+.+.+      
T Consensus       120 ~~~~~k~vlvlGa-GGaarAi~~~l~~~g~~~i~i~nRt~~~~~ka~~la~~~~~~~~~~~~~~--~~~~~~~l------  190 (288)
T PRK12749        120 FDIKGKTMVLLGA-GGASTAIGAQGAIEGLKEIKLFNRRDEFFDKALAFAQRVNENTDCVVTVT--DLADQQAF------  190 (288)
T ss_pred             CCcCCCEEEEECC-cHHHHHHHHHHHHCCCCEEEEEeCCccHHHHHHHHHHHhhhccCceEEEe--chhhhhhh------
Confidence            3678999999997 6669999999999997 8999999854   56666555543332122221  22111111      


Q ss_pred             HHhHcCCccEEEEccccC
Q 044010          119 TMNHFGRLDHLVNNAGIS  136 (248)
Q Consensus       119 ~~~~~g~id~vv~~ag~~  136 (248)
                       .+...+.|++||+....
T Consensus       191 -~~~~~~aDivINaTp~G  207 (288)
T PRK12749        191 -AEALASADILTNGTKVG  207 (288)
T ss_pred             -hhhcccCCEEEECCCCC
Confidence             12234789999987654

>PRK13982 bifunctional SbtC-like/phosphopantothenoylcysteine decarboxylase/phosphopantothenate synthase; Provisional

Probab=97.24  E-value=0.0021  Score=58.71  Aligned_cols=81  Identities=20%  Similarity=0.228  Sum_probs=56.8

Q ss_pred             cCCCCCEEEEcCCC----------------ChHHHHHHHHHHHcCCeEEEEeCCcchHHHHHHHHHhhCCCcEEEEEccC
Q 044010           43 EDVSGKVVIITGAS----------------SGIGEHLAYEYARRGACLALCARREKSLEEVADTAREIGSPDVITIRADV  106 (248)
Q Consensus        43 ~~~~~k~~lVtGg~----------------~gIG~aia~~l~~~G~~V~l~~r~~~~~~~~~~~l~~~~~~~v~~~~~D~  106 (248)
                      .+++||++|||+|.                |-.|+++|+.+..+|++|.+++-...        +.  .+..+.++.  +
T Consensus       252 ~~l~gkkvLITaGpT~E~IDpVR~ItN~SSGkmG~alA~aa~~~GA~VtlI~Gp~~--------~~--~p~~v~~i~--V  319 (475)
T PRK13982        252 KPLAGRRVLITAGPTHEPIDPVRYIANRSSGKQGFAIAAAAAAAGAEVTLISGPVD--------LA--DPQGVKVIH--V  319 (475)
T ss_pred             cccCCCEEEEecCCccccCCcceeeCCCCchHHHHHHHHHHHHCCCcEEEEeCCcC--------CC--CCCCceEEE--e
Confidence            36999999999983                56999999999999999999875432        11  122444443  3


Q ss_pred             CCHHHHHHHHHHHHhHcCCccEEEEccccCCcc
Q 044010          107 SKVDDCRSLVEETMNHFGRLDHLVNNAGISSVA  139 (248)
Q Consensus       107 ~~~~~~~~~~~~~~~~~g~id~vv~~ag~~~~~  139 (248)
                      ..   .+++.+.+.+.+. .|++|++|++....
T Consensus       320 ~t---a~eM~~av~~~~~-~Di~I~aAAVaDyr  348 (475)
T PRK13982        320 ES---ARQMLAAVEAALP-ADIAIFAAAVADWR  348 (475)
T ss_pred             cC---HHHHHHHHHhhCC-CCEEEEecccccee
Confidence            33   4444455545554 79999999987644

>COG0569 TrkA K+ transport systems, NAD-binding component [Inorganic ion transport and metabolism]

Probab=97.21  E-value=0.0015  Score=54.08  Aligned_cols=75  Identities=25%  Similarity=0.334  Sum_probs=56.5

Q ss_pred             CEEEEcCCCChHHHHHHHHHHHcCCeEEEEeCCcchHHHHHH-HHHhhCCCcEEEEEccCCCHHHHHHHHHHHHhHcCCc
Q 044010           48 KVVIITGASSGIGEHLAYEYARRGACLALCARREKSLEEVAD-TAREIGSPDVITIRADVSKVDDCRSLVEETMNHFGRL  126 (248)
Q Consensus        48 k~~lVtGg~~gIG~aia~~l~~~G~~V~l~~r~~~~~~~~~~-~l~~~~~~~v~~~~~D~~~~~~~~~~~~~~~~~~g~i  126 (248)
                      ++++|.|+ |-+|..+|+.|.++|++|++++++++..++... ++      ....+.+|.++++.++++=      ....
T Consensus         1 m~iiIiG~-G~vG~~va~~L~~~g~~Vv~Id~d~~~~~~~~~~~~------~~~~v~gd~t~~~~L~~ag------i~~a   67 (225)
T COG0569           1 MKIIIIGA-GRVGRSVARELSEEGHNVVLIDRDEERVEEFLADEL------DTHVVIGDATDEDVLEEAG------IDDA   67 (225)
T ss_pred             CEEEEECC-cHHHHHHHHHHHhCCCceEEEEcCHHHHHHHhhhhc------ceEEEEecCCCHHHHHhcC------CCcC
Confidence            35666665 889999999999999999999999887665332 22      5678899999998776651      1267


Q ss_pred             cEEEEcccc
Q 044010          127 DHLVNNAGI  135 (248)
Q Consensus       127 d~vv~~ag~  135 (248)
                      |+++...|.
T Consensus        68 D~vva~t~~   76 (225)
T COG0569          68 DAVVAATGN   76 (225)
T ss_pred             CEEEEeeCC
Confidence            777776664

>cd08295 double_bond_reductase_like Arabidopsis alkenal double bond reductase and leukotriene B4 12-hydroxydehydrogenase

Probab=97.19  E-value=0.0017  Score=56.74  Aligned_cols=80  Identities=16%  Similarity=0.289  Sum_probs=52.4

Q ss_pred             CCCEEEEcCCCChHHHHHHHHHHHcCCeEEEEeCCcchHHHHHHHHHhhCCCcEEEEEccCCCHHHHHHHHHHHHhHcCC
Q 044010           46 SGKVVIITGASSGIGEHLAYEYARRGACLALCARREKSLEEVADTAREIGSPDVITIRADVSKVDDCRSLVEETMNHFGR  125 (248)
Q Consensus        46 ~~k~~lVtGg~~gIG~aia~~l~~~G~~V~l~~r~~~~~~~~~~~l~~~~~~~v~~~~~D~~~~~~~~~~~~~~~~~~g~  125 (248)
                      .|.+++|+|++|++|..+++.+...|++|+.+.++.++.+.+.+.+   +.+.    ..|..+.++..+.+.+...  ++
T Consensus       151 ~g~~VlI~Ga~G~vG~~aiqlAk~~G~~Vi~~~~~~~~~~~~~~~l---Ga~~----vi~~~~~~~~~~~i~~~~~--~g  221 (338)
T cd08295         151 KGETVFVSAASGAVGQLVGQLAKLKGCYVVGSAGSDEKVDLLKNKL---GFDD----AFNYKEEPDLDAALKRYFP--NG  221 (338)
T ss_pred             CCCEEEEecCccHHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHhc---CCce----eEEcCCcccHHHHHHHhCC--CC
Confidence            5899999999999999998877778999999888876544443322   2211    1233332233333333321  47


Q ss_pred             ccEEEEccc
Q 044010          126 LDHLVNNAG  134 (248)
Q Consensus       126 id~vv~~ag  134 (248)
                      +|+++.+.|
T Consensus       222 vd~v~d~~g  230 (338)
T cd08295         222 IDIYFDNVG  230 (338)
T ss_pred             cEEEEECCC
Confidence            999998876

This group includes proteins identified as the Arabidopsis alkenal double bond reductase and leukotriene B4 12-hydroxydehydrogenase. The Arabidopsis enzyme, a member of the medium chain dehydrogenase/reductase family, catalyzes the reduction of 7-8-double bond of phenylpropanal substrates as a plant defense mechanism. Prostaglandins and related eicosanoids (lipid mediators involved in host defense and inflamation) are metabolized by the oxidation of the 15(S)-hydroxyl group of the NAD+-dependent (type I 15-PGDH) 15-prostaglandin dehydrogenase (15-PGDH) followed by reduction by NADPH/NADH-dependent (type II 15-PGDH) delta-13 15-prostaglandin reductase (13-PGR) to 15-keto-13,14,-dihydroprostaglandins. 13-PGR is a bifunctional enzyme, since it also has leukotriene B(4) 12-hydroxydehydrogenase activity. Leukotriene B4 (LTB4) can be metabolized by LTB4 20-hydroxylase in

>PRK05086 malate dehydrogenase; Provisional

Probab=97.16  E-value=0.002  Score=56.09  Aligned_cols=115  Identities=19%  Similarity=0.126  Sum_probs=62.6

Q ss_pred             CEEEEcCCCChHHHHHHHHHHH-c--CCeEEEEeCCcchHHHHHHHHHhhCCCcEEEEEccCCCHHHHHHHHHHHHhHcC
Q 044010           48 KVVIITGASSGIGEHLAYEYAR-R--GACLALCARREKSLEEVADTAREIGSPDVITIRADVSKVDDCRSLVEETMNHFG  124 (248)
Q Consensus        48 k~~lVtGg~~gIG~aia~~l~~-~--G~~V~l~~r~~~~~~~~~~~l~~~~~~~v~~~~~D~~~~~~~~~~~~~~~~~~g  124 (248)
                      ++++|.|++|++|.+++..+.. .  +.++++.+|++. .+...-.+.... .......++-   +++.+       ...
T Consensus         1 ~KI~IIGAsG~VG~aia~~l~~~~~~~~el~L~d~~~~-~~g~alDl~~~~-~~~~i~~~~~---~d~~~-------~l~   68 (312)
T PRK05086          1 MKVAVLGAAGGIGQALALLLKTQLPAGSELSLYDIAPV-TPGVAVDLSHIP-TAVKIKGFSG---EDPTP-------ALE   68 (312)
T ss_pred             CEEEEECCCCHHHHHHHHHHHcCCCCccEEEEEecCCC-CcceehhhhcCC-CCceEEEeCC---CCHHH-------HcC
Confidence            4689999999999999998865 3  457888888753 211111122111 0111111121   12212       223


Q ss_pred             CccEEEEccccCCcccccccCChHHHHHHHHhhhHHHHHHHHHHhhhhhhcCCeEEEEcC
Q 044010          125 RLDHLVNNAGISSVALFEDIVNITDFKQIMNINFWGSVYTTRFAVPHLRYTKGKIVVLSS  184 (248)
Q Consensus       125 ~id~vv~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~g~iV~isS  184 (248)
                      +.|++|.++|......       +.-.+.+..|....-.+.+.+.++   ...++|.+.|
T Consensus        69 ~~DiVIitaG~~~~~~-------~~R~dll~~N~~i~~~ii~~i~~~---~~~~ivivvs  118 (312)
T PRK05086         69 GADVVLISAGVARKPG-------MDRSDLFNVNAGIVKNLVEKVAKT---CPKACIGIIT  118 (312)
T ss_pred             CCCEEEEcCCCCCCCC-------CCHHHHHHHHHHHHHHHHHHHHHh---CCCeEEEEcc
Confidence            6999999999753221       223455666766655555554333   2234555544

>PRK09424 pntA NAD(P) transhydrogenase subunit alpha; Provisional

Probab=97.15  E-value=0.0078  Score=55.65  Aligned_cols=86  Identities=17%  Similarity=0.177  Sum_probs=56.0

Q ss_pred             CCCCCEEEEcCCCChHHHHHHHHHHHcCCeEEEEeCCcchHHHHHHHHHhhCCCcEEEEEccCCCH------------HH
Q 044010           44 DVSGKVVIITGASSGIGEHLAYEYARRGACLALCARREKSLEEVADTAREIGSPDVITIRADVSKV------------DD  111 (248)
Q Consensus        44 ~~~~k~~lVtGg~~gIG~aia~~l~~~G~~V~l~~r~~~~~~~~~~~l~~~~~~~v~~~~~D~~~~------------~~  111 (248)
                      ...+.+++|+|+ |.+|...+..+...|++|++.++++++.+...    +.+   ..++..|..+.            ++
T Consensus       162 ~~pg~kVlViGa-G~iGL~Ai~~Ak~lGA~V~a~D~~~~rle~ae----slG---A~~v~i~~~e~~~~~~gya~~~s~~  233 (509)
T PRK09424        162 KVPPAKVLVIGA-GVAGLAAIGAAGSLGAIVRAFDTRPEVAEQVE----SMG---AEFLELDFEEEGGSGDGYAKVMSEE  233 (509)
T ss_pred             CcCCCEEEEECC-cHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHH----HcC---CeEEEeccccccccccchhhhcchh
Confidence            456889999987 89999999988889999999999887655433    222   23333343321            11


Q ss_pred             HHHHHHHH-HhHcCCccEEEEccccCC
Q 044010          112 CRSLVEET-MNHFGRLDHLVNNAGISS  137 (248)
Q Consensus       112 ~~~~~~~~-~~~~g~id~vv~~ag~~~  137 (248)
                      ..+...+. .+..++.|++|.++|...
T Consensus       234 ~~~~~~~~~~~~~~gaDVVIetag~pg  260 (509)
T PRK09424        234 FIKAEMALFAEQAKEVDIIITTALIPG  260 (509)
T ss_pred             HHHHHHHHHHhccCCCCEEEECCCCCc
Confidence            22222222 222357999999999754

>PRK00066 ldh L-lactate dehydrogenase; Reviewed

Probab=97.14  E-value=0.02  Score=49.94  Aligned_cols=115  Identities=16%  Similarity=0.138  Sum_probs=73.6

Q ss_pred             CCCCCEEEEcCCCChHHHHHHHHHHHcCC--eEEEEeCCcchHHHHHHHHHhhCC--CcEEEEEccCCCHHHHHHHHHHH
Q 044010           44 DVSGKVVIITGASSGIGEHLAYEYARRGA--CLALCARREKSLEEVADTAREIGS--PDVITIRADVSKVDDCRSLVEET  119 (248)
Q Consensus        44 ~~~~k~~lVtGg~~gIG~aia~~l~~~G~--~V~l~~r~~~~~~~~~~~l~~~~~--~~v~~~~~D~~~~~~~~~~~~~~  119 (248)
                      +=+++++.|+|+ |.+|.+++..|+.+|.  ++++.+++++.++.....+.....  .++....   .+.          
T Consensus         3 ~~~~~ki~iiGa-G~vG~~~a~~l~~~~~~~el~L~D~~~~~~~g~~~Dl~~~~~~~~~~~i~~---~~~----------   68 (315)
T PRK00066          3 KKQHNKVVLVGD-GAVGSSYAYALVNQGIADELVIIDINKEKAEGDAMDLSHAVPFTSPTKIYA---GDY----------   68 (315)
T ss_pred             CCCCCEEEEECC-CHHHHHHHHHHHhcCCCCEEEEEeCCCchhHHHHHHHHhhccccCCeEEEe---CCH----------
Confidence            345679999998 9999999999999987  799999999888777777765431  1222221   222          


Q ss_pred             HhHcCCccEEEEccccCCcccccccCChHHHHHHHHhhhHHHHHHHHHHhhhhhh--cCCeEEEEcC
Q 044010          120 MNHFGRLDHLVNNAGISSVALFEDIVNITDFKQIMNINFWGSVYTTRFAVPHLRY--TKGKIVVLSS  184 (248)
Q Consensus       120 ~~~~g~id~vv~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~--~~g~iV~isS  184 (248)
                       +++.+-|++|..||.....   . .+.   .+.+..|..-.    +.+.+.+.+  .++.++++|-
T Consensus        69 -~~~~~adivIitag~~~k~---g-~~R---~dll~~N~~i~----~~i~~~i~~~~~~~~vivvsN  123 (315)
T PRK00066         69 -SDCKDADLVVITAGAPQKP---G-ETR---LDLVEKNLKIF----KSIVGEVMASGFDGIFLVASN  123 (315)
T ss_pred             -HHhCCCCEEEEecCCCCCC---C-CCH---HHHHHHHHHHH----HHHHHHHHHhCCCeEEEEccC
Confidence             2234799999999985322   1 122   34444454443    443444432  2367777764

>TIGR00715 precor6x_red precorrin-6x reductase

Probab=97.13  E-value=0.0013  Score=55.54  Aligned_cols=75  Identities=12%  Similarity=0.175  Sum_probs=55.1

Q ss_pred             EEEEcCCCChHHHHHHHHHHHcCCeEEEEeCCcchHHHHHHHHHhhCCCcEEEEEccCCCHHHHHHHHHHHHhHcCCccE
Q 044010           49 VVIITGASSGIGEHLAYEYARRGACLALCARREKSLEEVADTAREIGSPDVITIRADVSKVDDCRSLVEETMNHFGRLDH  128 (248)
Q Consensus        49 ~~lVtGg~~gIG~aia~~l~~~G~~V~l~~r~~~~~~~~~~~l~~~~~~~v~~~~~D~~~~~~~~~~~~~~~~~~g~id~  128 (248)
                      +++|+|||+- |+.++++|.++|++|+...++....+..    ...+   ...+..+..|.+++.+++.+     .++|.
T Consensus         2 ~ILvlGGT~e-gr~la~~L~~~g~~v~~s~~t~~~~~~~----~~~g---~~~v~~g~l~~~~l~~~l~~-----~~i~~   68 (256)
T TIGR00715         2 TVLLMGGTVD-SRAIAKGLIAQGIEILVTVTTSEGKHLY----PIHQ---ALTVHTGALDPQELREFLKR-----HSIDI   68 (256)
T ss_pred             eEEEEechHH-HHHHHHHHHhCCCeEEEEEccCCccccc----cccC---CceEEECCCCHHHHHHHHHh-----cCCCE
Confidence            6899999998 9999999999999999998887543322    1111   22355667777777666654     27999


Q ss_pred             EEEccccC
Q 044010          129 LVNNAGIS  136 (248)
Q Consensus       129 vv~~ag~~  136 (248)
                      +|+.+..+
T Consensus        69 VIDAtHPf   76 (256)
T TIGR00715        69 LVDATHPF   76 (256)
T ss_pred             EEEcCCHH
Confidence            99987654

This enzyme was found to be a monomer by gel filtration.

>PRK14968 putative methyltransferase; Provisional

Probab=97.11  E-value=0.0089  Score=47.43  Aligned_cols=122  Identities=19%  Similarity=0.114  Sum_probs=71.7

Q ss_pred             CCCCEEEEcCCCChHHHHHHHHHHHcCCeEEEEeCCcchHHHHHHHHHhhCCCc--EEEEEccCCCHHHHHHHHHHHHhH
Q 044010           45 VSGKVVIITGASSGIGEHLAYEYARRGACLALCARREKSLEEVADTAREIGSPD--VITIRADVSKVDDCRSLVEETMNH  122 (248)
Q Consensus        45 ~~~k~~lVtGg~~gIG~aia~~l~~~G~~V~l~~r~~~~~~~~~~~l~~~~~~~--v~~~~~D~~~~~~~~~~~~~~~~~  122 (248)
                      -+++++|-.|++.|.   ++..++++|.+|+.++++++..+...+.++..+...  +.++.+|..+.         ..+ 
T Consensus        22 ~~~~~vLd~G~G~G~---~~~~l~~~~~~v~~~D~s~~~~~~a~~~~~~~~~~~~~~~~~~~d~~~~---------~~~-   88 (188)
T PRK14968         22 KKGDRVLEVGTGSGI---VAIVAAKNGKKVVGVDINPYAVECAKCNAKLNNIRNNGVEVIRSDLFEP---------FRG-   88 (188)
T ss_pred             cCCCEEEEEccccCH---HHHHHHhhcceEEEEECCHHHHHHHHHHHHHcCCCCcceEEEecccccc---------ccc-
Confidence            367788888887665   444555558899999999877777766665544222  77888887542         111 


Q ss_pred             cCCccEEEEccccCCcccccccCChHHHHHHHHhhhHHH---HHHHHHHhhhhhhcCCeEEEEc
Q 044010          123 FGRLDHLVNNAGISSVALFEDIVNITDFKQIMNINFWGS---VYTTRFAVPHLRYTKGKIVVLS  183 (248)
Q Consensus       123 ~g~id~vv~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~---~~l~~~~~~~~~~~~g~iV~is  183 (248)
                       +.+|.++.|.++....+... . .+.+...+.....+.   -.+++.+.+.|+ .+|.++++.
T Consensus        89 -~~~d~vi~n~p~~~~~~~~~-~-~~~~~~~~~~~~~~~~~~~~~i~~~~~~Lk-~gG~~~~~~  148 (188)
T PRK14968         89 -DKFDVILFNPPYLPTEEEEE-W-DDWLNYALSGGKDGREVIDRFLDEVGRYLK-PGGRILLLQ  148 (188)
T ss_pred             -cCceEEEECCCcCCCCchhh-h-hhhhhhhhccCcChHHHHHHHHHHHHHhcC-CCeEEEEEE
Confidence             26999999987654332111 1 122233333222222   234555556664 566766654

>TIGR02853 spore_dpaA dipicolinic acid synthetase, A subunit

Probab=97.10  E-value=0.0024  Score=54.85  Aligned_cols=41  Identities=24%  Similarity=0.379  Sum_probs=36.6

Q ss_pred             CCCCCEEEEcCCCChHHHHHHHHHHHcCCeEEEEeCCcchHH
Q 044010           44 DVSGKVVIITGASSGIGEHLAYEYARRGACLALCARREKSLE   85 (248)
Q Consensus        44 ~~~~k~~lVtGg~~gIG~aia~~l~~~G~~V~l~~r~~~~~~   85 (248)
                      +++||+++|.|. |++|+++++.|...|++|.+.+|+.++.+
T Consensus       148 ~l~gk~v~IiG~-G~iG~avA~~L~~~G~~V~v~~R~~~~~~  188 (287)
T TIGR02853       148 TIHGSNVMVLGF-GRTGMTIARTFSALGARVFVGARSSADLA  188 (287)
T ss_pred             CCCCCEEEEEcC-hHHHHHHHHHHHHCCCEEEEEeCCHHHHH
Confidence            788999999998 77999999999999999999999876433

This predicted Rossman fold-containing protein is the A subunit of dipicolinic acid synthetase as found in most, though not all, endospore-forming low-GC Gram-positive bacteria; it is absent in Clostridium. The B subunit is represented by TIGR02852. This protein is also known as SpoVFA.

>cd00757 ThiF_MoeB_HesA_family ThiF_MoeB_HesA

Probab=97.03  E-value=0.0068  Score=50.26  Aligned_cols=83  Identities=20%  Similarity=0.336  Sum_probs=57.5

Q ss_pred             cCCCCCEEEEcCCCChHHHHHHHHHHHcCC-eEEEEeCCc-------------------chHHHHHHHHHhhCC-CcEEE
Q 044010           43 EDVSGKVVIITGASSGIGEHLAYEYARRGA-CLALCARRE-------------------KSLEEVADTAREIGS-PDVIT  101 (248)
Q Consensus        43 ~~~~~k~~lVtGg~~gIG~aia~~l~~~G~-~V~l~~r~~-------------------~~~~~~~~~l~~~~~-~~v~~  101 (248)
                      .++++++++|.|+ ||+|.++++.|+..|. ++.++|.+.                   .+.+.+.+.+++..+ .++..
T Consensus        17 ~~L~~~~VlivG~-GglGs~va~~La~~Gvg~i~lvD~D~ve~sNL~Rq~l~~~~diG~~Ka~~~~~~l~~~np~~~i~~   95 (228)
T cd00757          17 EKLKNARVLVVGA-GGLGSPAAEYLAAAGVGKLGLVDDDVVELSNLQRQILHTEADVGQPKAEAAAERLRAINPDVEIEA   95 (228)
T ss_pred             HHHhCCcEEEECC-CHHHHHHHHHHHHcCCCEEEEEcCCEEcCcccccccccChhhCCChHHHHHHHHHHHhCCCCEEEE
Confidence            4788999999985 8999999999999998 888886543                   255566666766654 24555


Q ss_pred             EEccCCCHHHHHHHHHHHHhHcCCccEEEEccc
Q 044010          102 IRADVSKVDDCRSLVEETMNHFGRLDHLVNNAG  134 (248)
Q Consensus       102 ~~~D~~~~~~~~~~~~~~~~~~g~id~vv~~ag  134 (248)
                      +..+++ .+.+.+++       .+.|++|.+..
T Consensus        96 ~~~~i~-~~~~~~~~-------~~~DvVi~~~d  120 (228)
T cd00757          96 YNERLD-AENAEELI-------AGYDLVLDCTD  120 (228)
T ss_pred             ecceeC-HHHHHHHH-------hCCCEEEEcCC
Confidence            555553 23333333       36888888754

Family of E1-like enzymes involved in molybdopterin and thiamine biosynthesis family. The common reaction mechanism catalyzed by MoeB and ThiF, like other E1 enzymes, begins with a nucleophilic attack of the C-terminal carboxylate of MoaD and ThiS, respectively, on the alpha-phosphate of an ATP molecule bound at the active site of the activating enzymes, leading to the formation of a high-energy acyladenylate intermediate and subsequently to the formation of a thiocarboxylate at the C termini of MoaD and ThiS. MoeB, as the MPT synthase (MoaE/MoaD complex) sulfurase, is involved in the biosynthesis of the molybdenum cofactor, a derivative of the tricyclic pterin, molybdopterin (MPT). ThiF catalyzes the adenylation of ThiS, as part of the biosynthesis pathway of thiamin pyrophosphate (vitamin B1).

>TIGR00518 alaDH alanine dehydrogenase

Probab=97.03  E-value=0.013  Score=52.18  Aligned_cols=77  Identities=21%  Similarity=0.163  Sum_probs=53.9

Q ss_pred             CCCCEEEEcCCCChHHHHHHHHHHHcCCeEEEEeCCcchHHHHHHHHHhhCCCcEEEEEccCCCHHHHHHHHHHHHhHcC
Q 044010           45 VSGKVVIITGASSGIGEHLAYEYARRGACLALCARREKSLEEVADTAREIGSPDVITIRADVSKVDDCRSLVEETMNHFG  124 (248)
Q Consensus        45 ~~~k~~lVtGg~~gIG~aia~~l~~~G~~V~l~~r~~~~~~~~~~~l~~~~~~~v~~~~~D~~~~~~~~~~~~~~~~~~g  124 (248)
                      +.+++++|.|+ |.+|+..++.+...|++|.+.+|+.++.+...+    ..+..   +..+..+.+.+.+.+       .
T Consensus       165 l~~~~VlViGa-G~vG~~aa~~a~~lGa~V~v~d~~~~~~~~l~~----~~g~~---v~~~~~~~~~l~~~l-------~  229 (370)
T TIGR00518       165 VEPGDVTIIGG-GVVGTNAAKMANGLGATVTILDINIDRLRQLDA----EFGGR---IHTRYSNAYEIEDAV-------K  229 (370)
T ss_pred             CCCceEEEEcC-CHHHHHHHHHHHHCCCeEEEEECCHHHHHHHHH----hcCce---eEeccCCHHHHHHHH-------c
Confidence            56778999977 799999999999999999999998765544333    22211   223445555444433       3


Q ss_pred             CccEEEEccccC
Q 044010          125 RLDHLVNNAGIS  136 (248)
Q Consensus       125 ~id~vv~~ag~~  136 (248)
                      ..|++|++++..
T Consensus       230 ~aDvVI~a~~~~  241 (370)
T TIGR00518       230 RADLLIGAVLIP  241 (370)
T ss_pred             cCCEEEEccccC
Confidence            689999998653

The family of known L-alanine dehydrogenases includes representatives from the Proteobacteria, Firmicutes, and Cyanobacteria, all with about 50 % identity or better. An outlier to this group in both sequence and gap pattern is the homolog from Helicobacter pylori, an epsilon division Proteobacteria, which must be considered a putative alanine dehydrogenase. Related proteins include saccharopine dehydrogenase and the N-terminal half of the NAD(P) transhydrogenase alpha subunit. All of these related proteins bind NAD and/or NADP.

>cd05188 MDR Medium chain reductase/dehydrogenase (MDR)/zinc-dependent alcohol dehydrogenase-like family

Probab=97.03  E-value=0.01  Score=49.38  Aligned_cols=79  Identities=25%  Similarity=0.323  Sum_probs=52.2

Q ss_pred             CCCCEEEEcCCCChHHHHHHHHHHHcCCeEEEEeCCcchHHHHHHHHHhhCCCcEEEEEccCCCHHHHHHHHHHHHhHcC
Q 044010           45 VSGKVVIITGASSGIGEHLAYEYARRGACLALCARREKSLEEVADTAREIGSPDVITIRADVSKVDDCRSLVEETMNHFG  124 (248)
Q Consensus        45 ~~~k~~lVtGg~~gIG~aia~~l~~~G~~V~l~~r~~~~~~~~~~~l~~~~~~~v~~~~~D~~~~~~~~~~~~~~~~~~g  124 (248)
                      -++++++|+|+++ +|.++++.+...|.+|+.+++++++.+..    ++.+. .   ...|..+.+....+.   ....+
T Consensus       133 ~~~~~vli~g~~~-~G~~~~~~a~~~g~~v~~~~~~~~~~~~~----~~~g~-~---~~~~~~~~~~~~~~~---~~~~~  200 (271)
T cd05188         133 KPGDTVLVLGAGG-VGLLAAQLAKAAGARVIVTDRSDEKLELA----KELGA-D---HVIDYKEEDLEEELR---LTGGG  200 (271)
T ss_pred             CCCCEEEEECCCH-HHHHHHHHHHHcCCeEEEEcCCHHHHHHH----HHhCC-c---eeccCCcCCHHHHHH---HhcCC
Confidence            4688999999988 99999988888899999999886554332    22232 1   123444433333332   12235


Q ss_pred             CccEEEEcccc
Q 044010          125 RLDHLVNNAGI  135 (248)
Q Consensus       125 ~id~vv~~ag~  135 (248)
                      .+|+++++++.
T Consensus       201 ~~d~vi~~~~~  211 (271)
T cd05188         201 GADVVIDAVGG  211 (271)
T ss_pred             CCCEEEECCCC
Confidence            79999998764

The medium chain reductase/dehydrogenases (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P) binding-Rossmann fold domain of a beta-alpha form and an N-terminal catalytic domain with distant homology to GroES. The MDR group contains a host of activities, including the founding alcohol dehydrogenase (ADH) , quinone reductase, sorbitol dehydrogenase, formaldehyde dehydrogenase, butanediol DH, ketose reductase, cinnamyl reductase, and numerous others. The zinc-dependent alcohol dehydro

>KOG4039 consensus Serine/threonine kinase TIP30/CC3 [Signal transduction mechanisms]

Probab=97.01  E-value=0.0044  Score=48.92  Aligned_cols=155  Identities=18%  Similarity=0.102  Sum_probs=92.5

Q ss_pred             CCCCCEEEEcCCCChHHHHHHHHHHHcCC--eEEEEeCCcchHHHHHHHHHhhCCCcEEEEEccCCCHHHHHHHHHHHHh
Q 044010           44 DVSGKVVIITGASSGIGEHLAYEYARRGA--CLALCARREKSLEEVADTAREIGSPDVITIRADVSKVDDCRSLVEETMN  121 (248)
Q Consensus        44 ~~~~k~~lVtGg~~gIG~aia~~l~~~G~--~V~l~~r~~~~~~~~~~~l~~~~~~~v~~~~~D~~~~~~~~~~~~~~~~  121 (248)
                      .|+++.++|.|++|-.|..+.+++++++-  +|+++.|++..-...        ++.+.-...|+...++....+     
T Consensus        15 ~mq~~s~fvlGAtG~~G~~llk~~~E~~~FSKV~~i~RR~~~d~at--------~k~v~q~~vDf~Kl~~~a~~~-----   81 (238)
T KOG4039|consen   15 RMQNMSGFVLGATGLCGGGLLKHAQEAPQFSKVYAILRRELPDPAT--------DKVVAQVEVDFSKLSQLATNE-----   81 (238)
T ss_pred             hhhccceEEEeccccccHHHHHHHHhcccceeEEEEEeccCCCccc--------cceeeeEEechHHHHHHHhhh-----
Confidence            46888999999999999999999999974  898888875321111        124445667765555443332     


Q ss_pred             HcCCccEEEEccccCCcccccccCChHHHHHHHHhhhHHHHHHHHHHhhhhhhcC--CeEEEEcCccccccCCCCccchH
Q 044010          122 HFGRLDHLVNNAGISSVALFEDIVNITDFKQIMNINFWGSVYTTRFAVPHLRYTK--GKIVVLSSAASWLTAPRMSFYNA  199 (248)
Q Consensus       122 ~~g~id~vv~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~--g~iV~isS~~~~~~~~~~~~Y~~  199 (248)
                        -.+|+.+++-|-...+.-.+     .+   ..+.---.+.+.+     +.+.+  ..++.+||..+...  +...|--
T Consensus        82 --qg~dV~FcaLgTTRgkaGad-----gf---ykvDhDyvl~~A~-----~AKe~Gck~fvLvSS~GAd~s--SrFlY~k  144 (238)
T KOG4039|consen   82 --QGPDVLFCALGTTRGKAGAD-----GF---YKVDHDYVLQLAQ-----AAKEKGCKTFVLVSSAGADPS--SRFLYMK  144 (238)
T ss_pred             --cCCceEEEeecccccccccC-----ce---EeechHHHHHHHH-----HHHhCCCeEEEEEeccCCCcc--cceeeee
Confidence              37999999988653221111     10   0011001111222     23334  47888998765433  3456777


Q ss_pred             HHHHHHHHHHHHHHHhCCCeEEEEEecCccccCc
Q 044010          200 SKAALVLFFETLRVELGSDVGVTIVTPGFIESEL  233 (248)
Q Consensus       200 sKaal~~l~~~la~~~~~~i~v~~v~pg~v~T~~  233 (248)
                      .|.-++.=+-.|.-     =++....||++.-+-
T Consensus       145 ~KGEvE~~v~eL~F-----~~~~i~RPG~ll~~R  173 (238)
T KOG4039|consen  145 MKGEVERDVIELDF-----KHIIILRPGPLLGER  173 (238)
T ss_pred             ccchhhhhhhhccc-----cEEEEecCcceeccc
Confidence            77777664433322     266678999985543

>COG0373 HemA Glutamyl-tRNA reductase [Coenzyme metabolism]

Probab=97.01  E-value=0.0057  Score=54.79  Aligned_cols=49  Identities=27%  Similarity=0.415  Sum_probs=43.4

Q ss_pred             cCCCCCEEEEcCCCChHHHHHHHHHHHcCC-eEEEEeCCcchHHHHHHHHH
Q 044010           43 EDVSGKVVIITGASSGIGEHLAYEYARRGA-CLALCARREKSLEEVADTAR   92 (248)
Q Consensus        43 ~~~~~k~~lVtGg~~gIG~aia~~l~~~G~-~V~l~~r~~~~~~~~~~~l~   92 (248)
                      .++++|++||.|+ |-+|.-+|++|+++|. +|.++.|+.++.++..+++.
T Consensus       174 ~~L~~~~vlvIGA-Gem~~lva~~L~~~g~~~i~IaNRT~erA~~La~~~~  223 (414)
T COG0373         174 GSLKDKKVLVIGA-GEMGELVAKHLAEKGVKKITIANRTLERAEELAKKLG  223 (414)
T ss_pred             cccccCeEEEEcc-cHHHHHHHHHHHhCCCCEEEEEcCCHHHHHHHHHHhC
Confidence            3689999999987 7899999999999996 89999999998888877664

>PRK08762 molybdopterin biosynthesis protein MoeB; Validated

Probab=96.98  E-value=0.0073  Score=53.95  Aligned_cols=82  Identities=21%  Similarity=0.370  Sum_probs=56.8

Q ss_pred             CCCCCEEEEcCCCChHHHHHHHHHHHcCC-eEEEEeCC-------------------cchHHHHHHHHHhhCC-CcEEEE
Q 044010           44 DVSGKVVIITGASSGIGEHLAYEYARRGA-CLALCARR-------------------EKSLEEVADTAREIGS-PDVITI  102 (248)
Q Consensus        44 ~~~~k~~lVtGg~~gIG~aia~~l~~~G~-~V~l~~r~-------------------~~~~~~~~~~l~~~~~-~~v~~~  102 (248)
                      .+++++++|.|+ ||+|..+++.|+..|. ++.+++++                   ..+.+.+.+.+++..+ .++..+
T Consensus       132 ~l~~~~VlvvG~-GG~Gs~ia~~La~~Gvg~i~lvD~d~v~~sNl~Rq~l~~~~diG~~Ka~~~~~~l~~~np~v~v~~~  210 (376)
T PRK08762        132 RLLEARVLLIGA-GGLGSPAALYLAAAGVGTLGIVDHDVVDRSNLQRQILHTEDRVGQPKVDSAAQRLAALNPDVQVEAV  210 (376)
T ss_pred             HHhcCcEEEECC-CHHHHHHHHHHHHcCCCeEEEEeCCEecchhhccccccchhhCCCcHHHHHHHHHHHHCCCCEEEEE
Confidence            678889999965 8999999999999998 89999997                   3466666677766654 233444


Q ss_pred             EccCCCHHHHHHHHHHHHhHcCCccEEEEccc
Q 044010          103 RADVSKVDDCRSLVEETMNHFGRLDHLVNNAG  134 (248)
Q Consensus       103 ~~D~~~~~~~~~~~~~~~~~~g~id~vv~~ag  134 (248)
                      ...+++ +.+.+++       .+.|++|++..
T Consensus       211 ~~~~~~-~~~~~~~-------~~~D~Vv~~~d  234 (376)
T PRK08762        211 QERVTS-DNVEALL-------QDVDVVVDGAD  234 (376)
T ss_pred             eccCCh-HHHHHHH-------hCCCEEEECCC
Confidence            444432 2333332       26888888754

>PF00899 ThiF: ThiF family; InterPro: IPR000594 Ubiquitin-activating enzyme (E1 enzyme) [, ] activates ubiquitin by first adenylating with ATP its C-terminal glycine residue and thereafter linking this residue to the side chain of a cysteine residue in E1, yielding an ubiquitin-E1 thiolester and free AMP

Probab=96.95  E-value=0.016  Score=43.79  Aligned_cols=78  Identities=24%  Similarity=0.411  Sum_probs=55.3

Q ss_pred             CCEEEEcCCCChHHHHHHHHHHHcCC-eEEEEeCCc-------------------chHHHHHHHHHhhC-CCcEEEEEcc
Q 044010           47 GKVVIITGASSGIGEHLAYEYARRGA-CLALCARRE-------------------KSLEEVADTAREIG-SPDVITIRAD  105 (248)
Q Consensus        47 ~k~~lVtGg~~gIG~aia~~l~~~G~-~V~l~~r~~-------------------~~~~~~~~~l~~~~-~~~v~~~~~D  105 (248)
                      +++++|.|+ ||+|..+++.|+..|. ++.++|.+.                   .+.+.+.+.+++.. ..++..+..+
T Consensus         2 ~~~v~iiG~-G~vGs~va~~L~~~Gv~~i~lvD~d~v~~~nl~r~~~~~~~~vG~~Ka~~~~~~l~~~np~~~v~~~~~~   80 (135)
T PF00899_consen    2 NKRVLIIGA-GGVGSEVAKNLARSGVGKITLVDDDIVEPSNLNRQFLYTEEDVGKNKAEAAKERLQEINPDVEVEAIPEK   80 (135)
T ss_dssp             T-EEEEEST-SHHHHHHHHHHHHHTTSEEEEEESSBB-GGGCCTCTTS-GGGTTSBHHHHHHHHHHHHSTTSEEEEEESH
T ss_pred             CCEEEEECc-CHHHHHHHHHHHHhCCCceeecCCcceeecccccccccccccchhHHHHHHHHHHHHhcCceeeeeeecc
Confidence            578888876 8999999999999998 899998743                   25566666676654 3466677777


Q ss_pred             CCCHHHHHHHHHHHHhHcCCccEEEEcc
Q 044010          106 VSKVDDCRSLVEETMNHFGRLDHLVNNA  133 (248)
Q Consensus       106 ~~~~~~~~~~~~~~~~~~g~id~vv~~a  133 (248)
                      + +.+...++++       +.|++|.+.
T Consensus        81 ~-~~~~~~~~~~-------~~d~vi~~~  100 (135)
T PF00899_consen   81 I-DEENIEELLK-------DYDIVIDCV  100 (135)
T ss_dssp             C-SHHHHHHHHH-------TSSEEEEES
T ss_pred             c-cccccccccc-------CCCEEEEec
Confidence            7 3344444442       678888764

Later the ubiquitin moiety is transferred to a cysteine residue on one of the many forms of ubiquitin- conjugating enzymes (E2). The family of ubiquitin-activating enzymes shares in its catalytic domain significant similarity with a large family of NAD/FAD-binding proteins. This domain is based on the common NAD/FAD-binding fold and finds members of several families, including UBA ubiquitin activating enzymes; the hesA/moeB/thiF family; NADH peroxidases; the LDH family; sarcosin oxidase; phytoene dehydrogenases; alanine dehydrogenases; hydroxyacyl-CoA dehydrogenases and many other NAD/FAD dependent dehydrogenases and oxidases.; GO: 0003824 catalytic activity; PDB: 1ZKM_D 1ZUD_3 1ZFN_D 1R4M_G 2NVU_A 1R4N_C 3DBR_A 3DBH_C 3DBL_G 1YOV_A ....

>cd01080 NAD_bind_m-THF_DH_Cyclohyd NADP binding domain of methylene-tetrahydrofolate dehydrogenase/cyclohydrolase

Probab=96.95  E-value=0.0035  Score=49.46  Aligned_cols=39  Identities=31%  Similarity=0.529  Sum_probs=35.2

Q ss_pred             cCCCCCEEEEcCCCChHHHHHHHHHHHcCCeEEEEeCCc
Q 044010           43 EDVSGKVVIITGASSGIGEHLAYEYARRGACLALCARRE   81 (248)
Q Consensus        43 ~~~~~k~~lVtGg~~gIG~aia~~l~~~G~~V~l~~r~~   81 (248)
                      .+++||+++|.|++.-.|..+++.|.++|++|.++.|+.
T Consensus        40 ~~l~gk~vlViG~G~~~G~~~a~~L~~~g~~V~v~~r~~   78 (168)
T cd01080          40 IDLAGKKVVVVGRSNIVGKPLAALLLNRNATVTVCHSKT   78 (168)
T ss_pred             CCCCCCEEEEECCcHHHHHHHHHHHhhCCCEEEEEECCc
Confidence            489999999999966679999999999999999999874

NADP binding domain of the Methylene-Tetrahydrofolate Dehydrogenase/cyclohydrolase (m-THF DH/cyclohydrolase) bifunctional enzyme. Tetrahydrofolate is a versatile carrier of activated one-carbon units. The major one-carbon folate donors are N-5 methyltetrahydrofolate, N5,N10-m-THF, and N10-formayltetrahydrofolate. The oxidation of metabolic intermediate m-THF to m-THF requires the enzyme m-THF DH. In addition, most DHs also have an associated cyclohydrolase activity which catalyzes its hydrolysis to N10-formyltetrahydrofolate. m-THF DH is typically found as part of a multifunctional protein in eukaryotes. NADP-dependent m-THF DH in mammals, birds and yeast are components of a trifunctional enzyme with DH, cyclohydrolase, and synthetase activities. Certain eukaryotic cells also contain homodimeric bifunctional DH/cyclodrolase form. In bacteria, monofucntional DH, as well a

>PLN03154 putative allyl alcohol dehydrogenase; Provisional

Probab=96.92  E-value=0.0039  Score=54.93  Aligned_cols=80  Identities=15%  Similarity=0.267  Sum_probs=51.7

Q ss_pred             CCCEEEEcCCCChHHHHHHHHHHHcCCeEEEEeCCcchHHHHHHHHHhhCCCcEEEEEccCCCHHHHHHHHHHHHhHcCC
Q 044010           46 SGKVVIITGASSGIGEHLAYEYARRGACLALCARREKSLEEVADTAREIGSPDVITIRADVSKVDDCRSLVEETMNHFGR  125 (248)
Q Consensus        46 ~~k~~lVtGg~~gIG~aia~~l~~~G~~V~l~~r~~~~~~~~~~~l~~~~~~~v~~~~~D~~~~~~~~~~~~~~~~~~g~  125 (248)
                      +|.+++|+|++|++|..+++.+...|++|+.++++.++.+.+.++   .+...    ..|..+.++..+.+.+...  +.
T Consensus       158 ~g~~VlV~GaaG~vG~~aiqlAk~~G~~Vi~~~~~~~k~~~~~~~---lGa~~----vi~~~~~~~~~~~i~~~~~--~g  228 (348)
T PLN03154        158 KGDSVFVSAASGAVGQLVGQLAKLHGCYVVGSAGSSQKVDLLKNK---LGFDE----AFNYKEEPDLDAALKRYFP--EG  228 (348)
T ss_pred             CCCEEEEecCccHHHHHHHHHHHHcCCEEEEEcCCHHHHHHHHHh---cCCCE----EEECCCcccHHHHHHHHCC--CC
Confidence            588999999999999998887777899999888877654433222   22211    2233332233333333221  36


Q ss_pred             ccEEEEccc
Q 044010          126 LDHLVNNAG  134 (248)
Q Consensus       126 id~vv~~ag  134 (248)
                      +|+++.++|
T Consensus       229 vD~v~d~vG  237 (348)
T PLN03154        229 IDIYFDNVG  237 (348)
T ss_pred             cEEEEECCC
Confidence            999998877

>COG0604 Qor NADPH:quinone reductase and related Zn-dependent oxidoreductases [Energy production and conversion / General function prediction only]

Probab=96.91  E-value=0.0046  Score=54.12  Aligned_cols=77  Identities=23%  Similarity=0.389  Sum_probs=51.3

Q ss_pred             CCEEEEcCCCChHHHHHHHHHHHcCCeEEEEeCCcchHHHHHHHHHhhCCCcEEEEEccCCCHHHHHHHHHHHHhHc-C-
Q 044010           47 GKVVIITGASSGIGEHLAYEYARRGACLALCARREKSLEEVADTAREIGSPDVITIRADVSKVDDCRSLVEETMNHF-G-  124 (248)
Q Consensus        47 ~k~~lVtGg~~gIG~aia~~l~~~G~~V~l~~r~~~~~~~~~~~l~~~~~~~v~~~~~D~~~~~~~~~~~~~~~~~~-g-  124 (248)
                      |.++||+||+||+|...++.....|++++++....++.+    .+++.+.+.    ..|.++.+    +.+++++.. | 
T Consensus       143 g~~VLV~gaaGgVG~~aiQlAk~~G~~~v~~~~s~~k~~----~~~~lGAd~----vi~y~~~~----~~~~v~~~t~g~  210 (326)
T COG0604         143 GETVLVHGAAGGVGSAAIQLAKALGATVVAVVSSSEKLE----LLKELGADH----VINYREED----FVEQVRELTGGK  210 (326)
T ss_pred             CCEEEEecCCchHHHHHHHHHHHcCCcEEEEecCHHHHH----HHHhcCCCE----EEcCCccc----HHHHHHHHcCCC
Confidence            899999999999999988877788977666666554433    344445432    23444443    444444433 3 


Q ss_pred             CccEEEEcccc
Q 044010          125 RLDHLVNNAGI  135 (248)
Q Consensus       125 ~id~vv~~ag~  135 (248)
                      ++|+++...|.
T Consensus       211 gvDvv~D~vG~  221 (326)
T COG0604         211 GVDVVLDTVGG  221 (326)
T ss_pred             CceEEEECCCH
Confidence            59999998874

>cd01338 MDH_choloroplast_like Chloroplast-like malate dehydrogenases

Probab=96.90  E-value=0.03  Score=48.96  Aligned_cols=145  Identities=17%  Similarity=0.104  Sum_probs=88.9

Q ss_pred             CEEEEcCCCChHHHHHHHHHHHcCC-------eEEEEeCCcch--HHHHHHHHHhhC-C--CcEEEEEccCCCHHHHHHH
Q 044010           48 KVVIITGASSGIGEHLAYEYARRGA-------CLALCARREKS--LEEVADTAREIG-S--PDVITIRADVSKVDDCRSL  115 (248)
Q Consensus        48 k~~lVtGg~~gIG~aia~~l~~~G~-------~V~l~~r~~~~--~~~~~~~l~~~~-~--~~v~~~~~D~~~~~~~~~~  115 (248)
                      +++.|+|++|.+|.+++..|+.+|.       ++++.+.++..  ++.....+.... .  .++.+.   -.+       
T Consensus         3 ~KV~IiGa~G~VG~~~a~~l~~~~~~~~~~~~el~L~Di~~~~~~a~g~a~Dl~~~~~~~~~~~~i~---~~~-------   72 (322)
T cd01338           3 VRVAVTGAAGQIGYSLLFRIASGEMFGPDQPVILQLLELPQALKALEGVAMELEDCAFPLLAEIVIT---DDP-------   72 (322)
T ss_pred             eEEEEECCCcHHHHHHHHHHHhccccCCCCceEEEEEecCCcccccceeehhhhhccccccCceEEe---cCc-------
Confidence            5789999999999999999998875       69999995432  443333333221 0  011111   111       


Q ss_pred             HHHHHhHcCCccEEEEccccCCcccccccCChHHHHHHHHhhhHHHHHHHHHHhhhhhh-c--CCeEEEEcCccc-----
Q 044010          116 VEETMNHFGRLDHLVNNAGISSVALFEDIVNITDFKQIMNINFWGSVYTTRFAVPHLRY-T--KGKIVVLSSAAS-----  187 (248)
Q Consensus       116 ~~~~~~~~g~id~vv~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~-~--~g~iV~isS~~~-----  187 (248)
                          .+.+.+-|++|.+||.....   .    ++-.+.+..|+.-    ++.+.+.+.+ .  .+.++++|.-.-     
T Consensus        73 ----~~~~~daDivvitaG~~~k~---g----~tR~dll~~N~~i----~~~i~~~i~~~~~~~~iiivvsNPvD~~t~~  137 (322)
T cd01338          73 ----NVAFKDADWALLVGAKPRGP---G----MERADLLKANGKI----FTAQGKALNDVASRDVKVLVVGNPCNTNALI  137 (322)
T ss_pred             ----HHHhCCCCEEEEeCCCCCCC---C----CcHHHHHHHHHHH----HHHHHHHHHhhCCCCeEEEEecCcHHHHHHH
Confidence                23335899999999975321   1    1223445556554    4444444432 2  356666663221     


Q ss_pred             ---cc-cCCCCccchHHHHHHHHHHHHHHHHhCC
Q 044010          188 ---WL-TAPRMSFYNASKAALVLFFETLRVELGS  217 (248)
Q Consensus       188 ---~~-~~~~~~~Y~~sKaal~~l~~~la~~~~~  217 (248)
                         .. +.|....|+.++.--..|...+++.++-
T Consensus       138 ~~k~sg~~p~~~ViG~t~LDs~Rl~~~la~~lgv  171 (322)
T cd01338         138 AMKNAPDIPPDNFTAMTRLDHNRAKSQLAKKAGV  171 (322)
T ss_pred             HHHHcCCCChHheEEehHHHHHHHHHHHHHHhCc
Confidence               11 2455568999999999999999999964

MDH is one of the key enzymes in the citric acid cycle, facilitating both the conversion of malate to oxaloacetate and replenishing levels of oxalacetate by reductive carboxylation of pyruvate. Members of this subfamily are bacterial MDHs, and plant MDHs localized to the choloroplasts. MDHs are part of the NAD(P)-binding Rossmann fold superfamily, which includes a wide variety of protein families including the NAD(P)-binding domains of alcohol dehydrogenases, tyrosine-dependent oxidoreductases, glyceraldehyde-3-phosphate dehydrogenases, formate/glycerate dehydrogenases, siroheme synthases, 6-phosphogluconate dehydrogenases, aminoacid dehydrogenases, repressor rex, and NAD-binding potassium channel domains, among others.

>cd08259 Zn_ADH5 Alcohol dehydrogenases of the MDR family

Probab=96.90  E-value=0.0047  Score=53.31  Aligned_cols=75  Identities=28%  Similarity=0.456  Sum_probs=50.7

Q ss_pred             CCCEEEEcCCCChHHHHHHHHHHHcCCeEEEEeCCcchHHHHHHHHHhhCCCcEEEEEccCCCHHHHHHHHHHHHhHcCC
Q 044010           46 SGKVVIITGASSGIGEHLAYEYARRGACLALCARREKSLEEVADTAREIGSPDVITIRADVSKVDDCRSLVEETMNHFGR  125 (248)
Q Consensus        46 ~~k~~lVtGg~~gIG~aia~~l~~~G~~V~l~~r~~~~~~~~~~~l~~~~~~~v~~~~~D~~~~~~~~~~~~~~~~~~g~  125 (248)
                      .+.+++|+|+++++|+++++.+...|.+|+.+.++.++.+..    ++.+. . ..+  |..   ++.+   .+ ++...
T Consensus       162 ~~~~vlI~ga~g~vG~~~~~~a~~~g~~v~~~~~~~~~~~~~----~~~~~-~-~~~--~~~---~~~~---~~-~~~~~  226 (332)
T cd08259         162 KGDTVLVTGAGGGVGIHAIQLAKALGARVIAVTRSPEKLKIL----KELGA-D-YVI--DGS---KFSE---DV-KKLGG  226 (332)
T ss_pred             CCCEEEEECCCCHHHHHHHHHHHHcCCeEEEEeCCHHHHHHH----HHcCC-c-EEE--ecH---HHHH---HH-HhccC
Confidence            578999999999999999999999999999988876544332    22222 1 111  221   1222   22 22347


Q ss_pred             ccEEEEcccc
Q 044010          126 LDHLVNNAGI  135 (248)
Q Consensus       126 id~vv~~ag~  135 (248)
                      +|++++++|.
T Consensus       227 ~d~v~~~~g~  236 (332)
T cd08259         227 ADVVIELVGS  236 (332)
T ss_pred             CCEEEECCCh
Confidence            9999999874

NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. This group contains proteins that share the characteristic catalytic and structural zinc-binding sites of the zinc-dependent alcohol dehydrogenase family. Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde and NADH, while in yeast and some other microorganisms ADH catalyzes the conversion acetaldehyde to ethanol in alcoholic fermentation. ADH is a member of the medium chain alcohol dehydrogenase family (MDR), which have a NAD(P)(H)-binding domain in a Rossmann fold of a beta-alpha form. The NAD(H)-binding region is comprised of 2 structurally similar halves, each of which contacts a mononucleotide. A GxGxxG motif after the first mononucleotide contact half allows the close contact of the coenzyme with the ADH backbone. The N-terminal catalytic domain has a distant homology to GroES.

>cd05276 p53_inducible_oxidoreductase PIG3 p53-inducible quinone oxidoreductase

Probab=96.89  E-value=0.0051  Score=52.44  Aligned_cols=80  Identities=25%  Similarity=0.346  Sum_probs=53.6

Q ss_pred             CCCEEEEcCCCChHHHHHHHHHHHcCCeEEEEeCCcchHHHHHHHHHhhCCCcEEEEEccCCCHHHHHHHHHHHHhHcCC
Q 044010           46 SGKVVIITGASSGIGEHLAYEYARRGACLALCARREKSLEEVADTAREIGSPDVITIRADVSKVDDCRSLVEETMNHFGR  125 (248)
Q Consensus        46 ~~k~~lVtGg~~gIG~aia~~l~~~G~~V~l~~r~~~~~~~~~~~l~~~~~~~v~~~~~D~~~~~~~~~~~~~~~~~~g~  125 (248)
                      ++++++|+|+++++|.++++.+...|++|++++++.++.+..    ++.+. +   ...|..+.+..+.+.+ ... .+.
T Consensus       139 ~~~~vlv~g~~~~ig~~~~~~~~~~g~~v~~~~~~~~~~~~~----~~~g~-~---~~~~~~~~~~~~~~~~-~~~-~~~  208 (323)
T cd05276         139 AGETVLIHGGASGVGTAAIQLAKALGARVIATAGSEEKLEAC----RALGA-D---VAINYRTEDFAEEVKE-ATG-GRG  208 (323)
T ss_pred             CCCEEEEEcCcChHHHHHHHHHHHcCCEEEEEcCCHHHHHHH----HHcCC-C---EEEeCCchhHHHHHHH-HhC-CCC
Confidence            678999999999999999999999999999998876554433    22222 1   2234444333333322 211 136


Q ss_pred             ccEEEEcccc
Q 044010          126 LDHLVNNAGI  135 (248)
Q Consensus       126 id~vv~~ag~  135 (248)
                      +|.+++++|.
T Consensus       209 ~d~vi~~~g~  218 (323)
T cd05276         209 VDVILDMVGG  218 (323)
T ss_pred             eEEEEECCch
Confidence            9999999873

PIG3 p53-inducible quinone oxidoreductase, a medium chain dehydrogenase/reductase family member, acts in the apoptotic pathway. PIG3 reduces ortho-quinones, but its apoptotic activity has been attributed to oxidative stress generation, since overexpression of PIG3 accumulates reactive oxygen species. PIG3 resembles the MDR family member quinone reductases, which catalyze the reduction of quinone to hydroxyquinone. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes or ketones. Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde and NADH, while in yeast and some other microorganisms ADH catalyzes the conversion acetaldehyde to ethanol in alcoholic fermentation. ADH is a member of the medium chain alcohol dehydrogenase family (MDR), which has a NAD(P)(H)-binding domain in a Rossmann fold of a beta-alpha form. The NAD(H)-binding

>PRK07688 thiamine/molybdopterin biosynthesis ThiF/MoeB-like protein; Validated

Probab=96.89  E-value=0.011  Score=51.97  Aligned_cols=38  Identities=26%  Similarity=0.366  Sum_probs=34.5

Q ss_pred             cCCCCCEEEEcCCCChHHHHHHHHHHHcCC-eEEEEeCCc
Q 044010           43 EDVSGKVVIITGASSGIGEHLAYEYARRGA-CLALCARRE   81 (248)
Q Consensus        43 ~~~~~k~~lVtGg~~gIG~aia~~l~~~G~-~V~l~~r~~   81 (248)
                      .++++++++|.|+ ||+|..+++.|+..|. ++.+++++.
T Consensus        20 ~~L~~~~VlVvG~-GglGs~va~~La~aGvg~i~lvD~D~   58 (339)
T PRK07688         20 QKLREKHVLIIGA-GALGTANAEMLVRAGVGKVTIVDRDY   58 (339)
T ss_pred             HHhcCCcEEEECC-CHHHHHHHHHHHHcCCCeEEEEeCCc
Confidence            4788999999988 8999999999999998 999999864

>TIGR02825 B4_12hDH leukotriene B4 12-hydroxydehydrogenase/15-oxo-prostaglandin 13-reductase

Probab=96.87  E-value=0.0041  Score=53.94  Aligned_cols=79  Identities=15%  Similarity=0.291  Sum_probs=51.8

Q ss_pred             CCCEEEEcCCCChHHHHHHHHHHHcCCeEEEEeCCcchHHHHHHHHHhhCCCcEEEEEccCCCHHHHHHHHHHHHhHcCC
Q 044010           46 SGKVVIITGASSGIGEHLAYEYARRGACLALCARREKSLEEVADTAREIGSPDVITIRADVSKVDDCRSLVEETMNHFGR  125 (248)
Q Consensus        46 ~~k~~lVtGg~~gIG~aia~~l~~~G~~V~l~~r~~~~~~~~~~~l~~~~~~~v~~~~~D~~~~~~~~~~~~~~~~~~g~  125 (248)
                      +|.+++|+|++|++|..+++.+...|++|+.+.+++++.+.+    ++.+. +   ...|..+.+...+.++...  .+.
T Consensus       138 ~g~~VLI~ga~g~vG~~aiqlAk~~G~~Vi~~~~s~~~~~~~----~~lGa-~---~vi~~~~~~~~~~~~~~~~--~~g  207 (325)
T TIGR02825       138 GGETVMVNAAAGAVGSVVGQIAKLKGCKVVGAAGSDEKVAYL----KKLGF-D---VAFNYKTVKSLEETLKKAS--PDG  207 (325)
T ss_pred             CCCEEEEeCCccHHHHHHHHHHHHcCCEEEEEeCCHHHHHHH----HHcCC-C---EEEeccccccHHHHHHHhC--CCC
Confidence            588999999999999998877777899999888877654433    33332 1   1223333333444443332  136


Q ss_pred             ccEEEEccc
Q 044010          126 LDHLVNNAG  134 (248)
Q Consensus       126 id~vv~~ag  134 (248)
                      +|+++.+.|
T Consensus       208 vdvv~d~~G  216 (325)
T TIGR02825       208 YDCYFDNVG  216 (325)
T ss_pred             eEEEEECCC
Confidence            999998876

Leukotriene B4 12-hydroxydehydrogenase is an NADP-dependent enzyme of arachidonic acid metabolism, responsible for converting leukotriene B4 to the much less active metabolite 12-oxo-leukotriene B4. The BRENDA database lists leukotriene B4 12-hydroxydehydrogenase as one of the synonyms of 2-alkenal reductase (EC 1.3.1.74), while 1.3.1.48 is 15-oxoprostaglandin 13-reductase.

>PRK08644 thiamine biosynthesis protein ThiF; Provisional

Probab=96.86  E-value=0.011  Score=48.58  Aligned_cols=37  Identities=35%  Similarity=0.477  Sum_probs=33.5

Q ss_pred             cCCCCCEEEEcCCCChHHHHHHHHHHHcCC-eEEEEeCC
Q 044010           43 EDVSGKVVIITGASSGIGEHLAYEYARRGA-CLALCARR   80 (248)
Q Consensus        43 ~~~~~k~~lVtGg~~gIG~aia~~l~~~G~-~V~l~~r~   80 (248)
                      .++++++++|.|+ ||+|..+++.|+..|. ++.++|.+
T Consensus        24 ~~L~~~~V~ViG~-GglGs~ia~~La~~Gvg~i~lvD~D   61 (212)
T PRK08644         24 EKLKKAKVGIAGA-GGLGSNIAVALARSGVGNLKLVDFD   61 (212)
T ss_pred             HHHhCCCEEEECc-CHHHHHHHHHHHHcCCCeEEEEeCC
Confidence            4788999999986 8999999999999998 79999887

>cd08293 PTGR2 Prostaglandin reductase

Probab=96.85  E-value=0.0051  Score=53.69  Aligned_cols=78  Identities=13%  Similarity=0.177  Sum_probs=50.5

Q ss_pred             CCEEEEcCCCChHHHHHHHHHHHcCC-eEEEEeCCcchHHHHHHHHHhhCCCcEEEEEccCCCHHHHHHHHHHHHhHcCC
Q 044010           47 GKVVIITGASSGIGEHLAYEYARRGA-CLALCARREKSLEEVADTAREIGSPDVITIRADVSKVDDCRSLVEETMNHFGR  125 (248)
Q Consensus        47 ~k~~lVtGg~~gIG~aia~~l~~~G~-~V~l~~r~~~~~~~~~~~l~~~~~~~v~~~~~D~~~~~~~~~~~~~~~~~~g~  125 (248)
                      |.+++|+|++|++|..+++.+...|+ +|+.+++++++.+.+.+++   +...  +  .|..+ +++.+.+.++..  +.
T Consensus       155 ~~~VlI~ga~g~vG~~aiqlAk~~G~~~Vi~~~~s~~~~~~~~~~l---Ga~~--v--i~~~~-~~~~~~i~~~~~--~g  224 (345)
T cd08293         155 NQTMVVSGAAGACGSLAGQIGRLLGCSRVVGICGSDEKCQLLKSEL---GFDA--A--INYKT-DNVAERLRELCP--EG  224 (345)
T ss_pred             CCEEEEECCCcHHHHHHHHHHHHcCCCEEEEEcCCHHHHHHHHHhc---CCcE--E--EECCC-CCHHHHHHHHCC--CC
Confidence            48999999999999998877777898 7999888776544433322   2211  1  23322 233333333322  46


Q ss_pred             ccEEEEccc
Q 044010          126 LDHLVNNAG  134 (248)
Q Consensus       126 id~vv~~ag  134 (248)
                      +|+++.++|
T Consensus       225 vd~vid~~g  233 (345)
T cd08293         225 VDVYFDNVG  233 (345)
T ss_pred             ceEEEECCC
Confidence            999999876

Prostaglandins and related eicosanoids are metabolized by the oxidation of the 15(S)-hydroxyl group of the NAD+-dependent (type I 15-PGDH) 15-prostaglandin dehydrogenase (15-PGDH) followed by reduction by NADPH/NADH-dependent (type II 15-PGDH) delta-13 15-prostaglandin reductase (13-PGR) to 15-keto-13,14,-dihydroprostaglandins. 13-PGR is a bifunctional enzyme, since it also has leukotriene B(4) 12-hydroxydehydrogenase activity. These 15-PGDH and related enzymes are members of the medium chain dehydrogenase/reductase family. The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acid

>KOG1198 consensus Zinc-binding oxidoreductase [Energy production and conversion; General function prediction only]

Probab=96.83  E-value=0.01  Score=52.42  Aligned_cols=81  Identities=22%  Similarity=0.281  Sum_probs=52.9

Q ss_pred             CCCCEEEEcCCCChHHHHHHHHHHHcCCeEEEEeCCcchHHHHHHHHHhhCCCcEEEEEccCCCHHHHHHHHHHHHhHcC
Q 044010           45 VSGKVVIITGASSGIGEHLAYEYARRGACLALCARREKSLEEVADTAREIGSPDVITIRADVSKVDDCRSLVEETMNHFG  124 (248)
Q Consensus        45 ~~~k~~lVtGg~~gIG~aia~~l~~~G~~V~l~~r~~~~~~~~~~~l~~~~~~~v~~~~~D~~~~~~~~~~~~~~~~~~g  124 (248)
                      -+|+.+||.||+||.|.+.++.....|+..+++.+..++. +.   .++.+.+    ...|..+++-+++..+..   .+
T Consensus       156 ~~g~~vLv~ggsggVG~~aiQlAk~~~~~~v~t~~s~e~~-~l---~k~lGAd----~vvdy~~~~~~e~~kk~~---~~  224 (347)
T KOG1198|consen  156 SKGKSVLVLGGSGGVGTAAIQLAKHAGAIKVVTACSKEKL-EL---VKKLGAD----EVVDYKDENVVELIKKYT---GK  224 (347)
T ss_pred             CCCCeEEEEeCCcHHHHHHHHHHHhcCCcEEEEEcccchH-HH---HHHcCCc----EeecCCCHHHHHHHHhhc---CC
Confidence            3688999999999999999887777895555555554432 22   2333322    446777743333332211   56


Q ss_pred             CccEEEEccccC
Q 044010          125 RLDHLVNNAGIS  136 (248)
Q Consensus       125 ~id~vv~~ag~~  136 (248)
                      ++|+++.++|..
T Consensus       225 ~~DvVlD~vg~~  236 (347)
T KOG1198|consen  225 GVDVVLDCVGGS  236 (347)
T ss_pred             CccEEEECCCCC
Confidence            899999999974

>TIGR01470 cysG_Nterm siroheme synthase, N-terminal domain

Probab=96.83  E-value=0.0019  Score=52.69  Aligned_cols=121  Identities=14%  Similarity=0.115  Sum_probs=67.9

Q ss_pred             CCCCCEEEEcCCCChHHHHHHHHHHHcCCeEEEEeCCcchHHHHHHHHHhhCCCcEEEEEccCCCHHHHHHHHHHHHhHc
Q 044010           44 DVSGKVVIITGASSGIGEHLAYEYARRGACLALCARREKSLEEVADTAREIGSPDVITIRADVSKVDDCRSLVEETMNHF  123 (248)
Q Consensus        44 ~~~~k~~lVtGg~~gIG~aia~~l~~~G~~V~l~~r~~~~~~~~~~~l~~~~~~~v~~~~~D~~~~~~~~~~~~~~~~~~  123 (248)
                      +++||.++|.|| |.+|..-++.|++.|++|.+++.+..   +..+++.+.+  ++.++.-+.... .           +
T Consensus         6 ~l~gk~vlVvGg-G~va~rk~~~Ll~~ga~VtVvsp~~~---~~l~~l~~~~--~i~~~~~~~~~~-d-----------l   67 (205)
T TIGR01470         6 NLEGRAVLVVGG-GDVALRKARLLLKAGAQLRVIAEELE---SELTLLAEQG--GITWLARCFDAD-I-----------L   67 (205)
T ss_pred             EcCCCeEEEECc-CHHHHHHHHHHHHCCCEEEEEcCCCC---HHHHHHHHcC--CEEEEeCCCCHH-H-----------h
Confidence            689999999987 78999999999999999999987654   1222233333  566666665421 1           1


Q ss_pred             CCccEEEEccccCCcccccccCChHHHHHHHHhhhHHHHHHHHHHhhhhhhcCCeEEEEcCc
Q 044010          124 GRLDHLVNNAGISSVALFEDIVNITDFKQIMNINFWGSVYTTRFAVPHLRYTKGKIVVLSSA  185 (248)
Q Consensus       124 g~id~vv~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~g~iV~isS~  185 (248)
                      .+.+.+|.+.+.......   ...+.-..-+-+|..+-..++....|..-+.++-.|.+||.
T Consensus        68 ~~~~lVi~at~d~~ln~~---i~~~a~~~~ilvn~~d~~e~~~f~~pa~~~~g~l~iaisT~  126 (205)
T TIGR01470        68 EGAFLVIAATDDEELNRR---VAHAARARGVPVNVVDDPELCSFIFPSIVDRSPVVVAISSG  126 (205)
T ss_pred             CCcEEEEECCCCHHHHHH---HHHHHHHcCCEEEECCCcccCeEEEeeEEEcCCEEEEEECC
Confidence            356666655443211100   00011111233344444344444455444444555666664

This model represents a subfamily of CysG N-terminal region-related sequences. All sequences in the seed alignment for this model are N-terminal regions of known or predicted siroheme synthases. The C-terminal region of each is uroporphyrin-III C-methyltransferase (EC 2.1.1.107), which catalyzes the first step committed to the biosynthesis of either siroheme or cobalamin (vitamin B12) rather than protoheme (heme). The region represented by this model completes the process of oxidation and iron insertion to yield siroheme. Siroheme is a cofactor for nitrite and sulfite reductases, so siroheme synthase is CysG of cysteine biosynthesis in some organisms.

>PF02826 2-Hacid_dh_C: D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain; InterPro: IPR006140 A number of NAD-dependent 2-hydroxyacid dehydrogenases which seem to be specific for the D-isomer of their substrate have been shown to be functionally and structurally related

Probab=96.82  E-value=0.014  Score=46.52  Aligned_cols=72  Identities=24%  Similarity=0.244  Sum_probs=48.7

Q ss_pred             ccCCCCCEEEEcCCCChHHHHHHHHHHHcCCeEEEEeCCcchHHHHHHHHHhhCCCcEEEEEccCCCHHHHHHHHHHHHh
Q 044010           42 SEDVSGKVVIITGASSGIGEHLAYEYARRGACLALCARREKSLEEVADTAREIGSPDVITIRADVSKVDDCRSLVEETMN  121 (248)
Q Consensus        42 ~~~~~~k~~lVtGg~~gIG~aia~~l~~~G~~V~l~~r~~~~~~~~~~~l~~~~~~~v~~~~~D~~~~~~~~~~~~~~~~  121 (248)
                      ..++.||++.|.|. |.||+++|+.+...|++|+..+|.......    ....   .+        ...++++++.    
T Consensus        31 ~~~l~g~tvgIiG~-G~IG~~vA~~l~~fG~~V~~~d~~~~~~~~----~~~~---~~--------~~~~l~ell~----   90 (178)
T PF02826_consen   31 GRELRGKTVGIIGY-GRIGRAVARRLKAFGMRVIGYDRSPKPEEG----ADEF---GV--------EYVSLDELLA----   90 (178)
T ss_dssp             BS-STTSEEEEEST-SHHHHHHHHHHHHTT-EEEEEESSCHHHHH----HHHT---TE--------EESSHHHHHH----
T ss_pred             ccccCCCEEEEEEE-cCCcCeEeeeeecCCceeEEecccCChhhh----cccc---cc--------eeeehhhhcc----
Confidence            35789999999976 999999999999999999999998764331    1111   11        1224555555    


Q ss_pred             HcCCccEEEEccccC
Q 044010          122 HFGRLDHLVNNAGIS  136 (248)
Q Consensus       122 ~~g~id~vv~~ag~~  136 (248)
                         +-|+++++....
T Consensus        91 ---~aDiv~~~~plt  102 (178)
T PF02826_consen   91 ---QADIVSLHLPLT  102 (178)
T ss_dssp             ---H-SEEEE-SSSS
T ss_pred             ---hhhhhhhhhccc
Confidence               478998887654

All contain a glycine-rich region located in the central section of these enzymes, this region corresponds to the NAD-binding domain. The catalytic domain is described in IPR006139 from INTERPRO ; GO: 0016616 oxidoreductase activity, acting on the CH-OH group of donors, NAD or NADP as acceptor, 0048037 cofactor binding, 0055114 oxidation-reduction process; PDB: 3JTM_A 3NAQ_B 3N7U_J 3KB6_B 3GG9_A 1QP8_B 2CUK_C 2W2L_D 2W2K_A 1WWK_A ....

>TIGR00561 pntA NAD(P) transhydrogenase, alpha subunit

Probab=96.81  E-value=0.019  Score=53.12  Aligned_cols=85  Identities=19%  Similarity=0.161  Sum_probs=56.6

Q ss_pred             CCCCCEEEEcCCCChHHHHHHHHHHHcCCeEEEEeCCcchHHHHHHHHHhhCCCcEEEEEccCCC-------------HH
Q 044010           44 DVSGKVVIITGASSGIGEHLAYEYARRGACLALCARREKSLEEVADTAREIGSPDVITIRADVSK-------------VD  110 (248)
Q Consensus        44 ~~~~k~~lVtGg~~gIG~aia~~l~~~G~~V~l~~r~~~~~~~~~~~l~~~~~~~v~~~~~D~~~-------------~~  110 (248)
                      ...+.+++|.|+ |.+|...+..+...|++|++.+++.++++...    +.+   ..++..|..+             .+
T Consensus       161 ~vp~akVlViGa-G~iGl~Aa~~ak~lGA~V~v~d~~~~rle~a~----~lG---a~~v~v~~~e~g~~~~gYa~~~s~~  232 (511)
T TIGR00561       161 KVPPAKVLVIGA-GVAGLAAIGAANSLGAIVRAFDTRPEVKEQVQ----SMG---AEFLELDFKEEGGSGDGYAKVMSEE  232 (511)
T ss_pred             CCCCCEEEEECC-CHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHH----HcC---CeEEeccccccccccccceeecCHH
Confidence            456789999986 89999999999999999999999887544332    222   2344555422             22


Q ss_pred             HHHHHHHHHHhHcCCccEEEEccccC
Q 044010          111 DCRSLVEETMNHFGRLDHLVNNAGIS  136 (248)
Q Consensus       111 ~~~~~~~~~~~~~g~id~vv~~ag~~  136 (248)
                      ..++..+...+...+.|++|+++-+.
T Consensus       233 ~~~~~~~~~~e~~~~~DIVI~Talip  258 (511)
T TIGR00561       233 FIAAEMELFAAQAKEVDIIITTALIP  258 (511)
T ss_pred             HHHHHHHHHHHHhCCCCEEEECcccC
Confidence            23333333444456899999999443

In some species, such as Rhodospirillum rubrum, the alpha chain is replaced by two shorter chains, both with some homology to the full-length alpha chain modeled here. These score below the trusted cutoff.

>TIGR01381 E1_like_apg7 E1-like protein-activating enzyme Gsa7p/Apg7p

Probab=96.80  E-value=0.008  Score=56.58  Aligned_cols=49  Identities=16%  Similarity=0.194  Sum_probs=40.5

Q ss_pred             HHHHhhhhccccCCCCCEEEEcCCCChHHHHHHHHHHHcCC-eEEEEeCCc
Q 044010           32 FLLSVFNSIFSEDVSGKVVIITGASSGIGEHLAYEYARRGA-CLALCARRE   81 (248)
Q Consensus        32 ~~~~~~~~~~~~~~~~k~~lVtGg~~gIG~aia~~l~~~G~-~V~l~~r~~   81 (248)
                      +.|+....+-.+.+++.+++|.|+ ||+|..+++.|+..|. ++.+++.+.
T Consensus       323 mkWRllP~l~~ekL~~~kVLIvGa-GGLGs~VA~~La~~GVg~ItlVD~D~  372 (664)
T TIGR01381       323 MKWRLHPDLQLERYSQLKVLLLGA-GTLGCNVARCLIGWGVRHITFVDNGK  372 (664)
T ss_pred             HhhhcCChhhHHHHhcCeEEEECC-cHHHHHHHHHHHHcCCCeEEEEcCCE
Confidence            455566555557899999999987 8999999999999998 899988743

This model represents a family of eukaryotic proteins found in animals, plants, and yeasts, including Apg7p (YHR171W) from Saccharomyces cerevisiae and GSA7 from Pichia pastoris. Members are about 650 to 700 residues in length and include a central domain of about 150 residues shared with the ThiF/MoeB/HesA family of proteins. A low level of similarity to ubiquitin-activating enzyme E1 is described in a paper on peroxisome autophagy mediated by GSA7, and is the basis of the name ubiquitin activating enzyme E1-like protein. Members of the family appear to be involved in protein lipidation events analogous to ubiquitination and required for membrane fusion events during autophagy.

>PRK05597 molybdopterin biosynthesis protein MoeB; Validated

Probab=96.76  E-value=0.016  Score=51.41  Aligned_cols=64  Identities=14%  Similarity=0.209  Sum_probs=47.5

Q ss_pred             cCCCCCEEEEcCCCChHHHHHHHHHHHcCC-eEEEEeCCc-------------------chHHHHHHHHHhhCC-CcEEE
Q 044010           43 EDVSGKVVIITGASSGIGEHLAYEYARRGA-CLALCARRE-------------------KSLEEVADTAREIGS-PDVIT  101 (248)
Q Consensus        43 ~~~~~k~~lVtGg~~gIG~aia~~l~~~G~-~V~l~~r~~-------------------~~~~~~~~~l~~~~~-~~v~~  101 (248)
                      .++++++++|.|+ ||+|..+++.|+..|. ++.+++.+.                   .+.+.+.+.+++..+ .++..
T Consensus        24 ~~L~~~~VlivG~-GGlGs~~a~~La~~Gvg~i~lvD~D~ve~sNL~Rq~l~~~~diG~~Ka~~a~~~l~~~np~v~v~~  102 (355)
T PRK05597         24 QSLFDAKVAVIGA-GGLGSPALLYLAGAGVGHITIIDDDTVDLSNLHRQVIHSTAGVGQPKAESAREAMLALNPDVKVTV  102 (355)
T ss_pred             HHHhCCeEEEECC-CHHHHHHHHHHHHcCCCeEEEEeCCEEcccccccCcccChhHCCChHHHHHHHHHHHHCCCcEEEE
Confidence            4688999999987 8999999999999998 899998864                   356666667766654 23344


Q ss_pred             EEccCC
Q 044010          102 IRADVS  107 (248)
Q Consensus       102 ~~~D~~  107 (248)
                      +...++
T Consensus       103 ~~~~i~  108 (355)
T PRK05597        103 SVRRLT  108 (355)
T ss_pred             EEeecC
Confidence            444443

>COG3007 Uncharacterized paraquat-inducible protein B [Function unknown]

Probab=96.76  E-value=0.12  Score=44.11  Aligned_cols=169  Identities=15%  Similarity=0.095  Sum_probs=96.7

Q ss_pred             CCCEEEEcCCCChHHHHH--HHHHHHcCCeEEEEeC-Cc-c---------hHHHHHHHHHhhCCCcEEEEEccCCCHHHH
Q 044010           46 SGKVVIITGASSGIGEHL--AYEYARRGACLALCAR-RE-K---------SLEEVADTAREIGSPDVITIRADVSKVDDC  112 (248)
Q Consensus        46 ~~k~~lVtGg~~gIG~ai--a~~l~~~G~~V~l~~r-~~-~---------~~~~~~~~l~~~~~~~v~~~~~D~~~~~~~  112 (248)
                      .-|++||.|+++|.|.+.  +-.|. -|++-+-+.- .+ .         -.+...++.....+--.+-+..|.-+-+.-
T Consensus        40 gPKkVLviGaSsGyGLa~RIsaaFG-~gAdTiGVffE~pgte~~~gtagwyn~~~f~~~A~~kGlyAksingDaFS~e~k  118 (398)
T COG3007          40 GPKKVLVIGASSGYGLAARISAAFG-PGADTIGVFFERPGTERKPGTAGWYNNAAFKKFAKQKGLYAKSINGDAFSDEMK  118 (398)
T ss_pred             CCceEEEEecCCcccHHHHHHHHhC-CCCceeeEEeecCCccCCCcchhhhHHHHHHHHHHhcCceeeecccchhhHHHH
Confidence            348999999999988773  33333 3554333322 11 0         012222333333332456788899888889


Q ss_pred             HHHHHHHHhHcCCccEEEEccccCCcccc---------------------------------cccCChHHHHHHHHhhhH
Q 044010          113 RSLVEETMNHFGRLDHLVNNAGISSVALF---------------------------------EDIVNITDFKQIMNINFW  159 (248)
Q Consensus       113 ~~~~~~~~~~~g~id~vv~~ag~~~~~~~---------------------------------~~~~~~~~~~~~~~~n~~  159 (248)
                      ++.++.+++++|++|.+|+.-+...++.+                                 .++.+.++.+.+..  ++
T Consensus       119 ~kvIe~Ik~~~g~vDlvvYSlAsp~Rk~pktgev~~SalKpIg~a~~~~~ldt~kd~i~e~~lepAseqEI~~Tv~--VM  196 (398)
T COG3007         119 QKVIEAIKQDFGKVDLVVYSLASPRRKHPKTGEVFRSALKPIGEAVSGRTLDTEKDVIIEATLEPASEQEIADTVA--VM  196 (398)
T ss_pred             HHHHHHHHHhhccccEEEEeccCccccCCCcchhhHhhhcchhhhccccccccccceeeeeecccccHHHHHHHHH--hh
Confidence            99999999999999999988765432211                                 11122334444332  22


Q ss_pred             HH--H-HHHHHHhhh-hhhcCCeEEEEcCccccccCC--CCccchHHHHHHHHHHHHHHHHhCC
Q 044010          160 GS--V-YTTRFAVPH-LRYTKGKIVVLSSAASWLTAP--RMSFYNASKAALVLFFETLRVELGS  217 (248)
Q Consensus       160 ~~--~-~l~~~~~~~-~~~~~g~iV~isS~~~~~~~~--~~~~Y~~sKaal~~l~~~la~~~~~  217 (248)
                      |-  | ..+++++.. ....+.+-+..|-...-..+|  -..+-+.+|.=+++-++.+...++.
T Consensus       197 GGeDWq~WidaLl~advlaeg~kTiAfsYiG~~iT~~IYw~GtiG~AK~DLd~~~~~inekLa~  260 (398)
T COG3007         197 GGEDWQMWIDALLEADVLAEGAKTIAFSYIGEKITHPIYWDGTIGRAKKDLDQKSLAINEKLAA  260 (398)
T ss_pred             CcchHHHHHHHHHhccccccCceEEEEEecCCccccceeeccccchhhhcHHHHHHHHHHHHHh
Confidence            22  1 233443322 112345555555444333322  2346799999999999998888853

>TIGR01035 hemA glutamyl-tRNA reductase

Probab=96.75  E-value=0.0091  Score=54.08  Aligned_cols=46  Identities=26%  Similarity=0.473  Sum_probs=39.1

Q ss_pred             CCCCCEEEEcCCCChHHHHHHHHHHHcC-CeEEEEeCCcchHHHHHHH
Q 044010           44 DVSGKVVIITGASSGIGEHLAYEYARRG-ACLALCARREKSLEEVADT   90 (248)
Q Consensus        44 ~~~~k~~lVtGg~~gIG~aia~~l~~~G-~~V~l~~r~~~~~~~~~~~   90 (248)
                      ++++++++|.|+ |.+|..+++.|...| .+|++.+|+.++.++..+.
T Consensus       177 ~l~~~~VlViGa-G~iG~~~a~~L~~~G~~~V~v~~rs~~ra~~la~~  223 (417)
T TIGR01035       177 SLKGKKALLIGA-GEMGELVAKHLLRKGVGKILIANRTYERAEDLAKE  223 (417)
T ss_pred             CccCCEEEEECC-hHHHHHHHHHHHHCCCCEEEEEeCCHHHHHHHHHH
Confidence            578999999987 999999999999999 5899999988766555443

This enzyme, together with glutamate-1-semialdehyde-2,1-aminomutase (TIGR00713), leads to the production of delta-amino-levulinic acid from Glu-tRNA.

>PRK00045 hemA glutamyl-tRNA reductase; Reviewed

Probab=96.74  E-value=0.0068  Score=55.01  Aligned_cols=47  Identities=34%  Similarity=0.536  Sum_probs=39.8

Q ss_pred             CCCCCEEEEcCCCChHHHHHHHHHHHcCC-eEEEEeCCcchHHHHHHHH
Q 044010           44 DVSGKVVIITGASSGIGEHLAYEYARRGA-CLALCARREKSLEEVADTA   91 (248)
Q Consensus        44 ~~~~k~~lVtGg~~gIG~aia~~l~~~G~-~V~l~~r~~~~~~~~~~~l   91 (248)
                      ++++++++|.|+ |.+|..+++.|...|+ +|++.+|+.++.++..+++
T Consensus       179 ~~~~~~vlViGa-G~iG~~~a~~L~~~G~~~V~v~~r~~~ra~~la~~~  226 (423)
T PRK00045        179 DLSGKKVLVIGA-GEMGELVAKHLAEKGVRKITVANRTLERAEELAEEF  226 (423)
T ss_pred             CccCCEEEEECc-hHHHHHHHHHHHHCCCCeEEEEeCCHHHHHHHHHHc
Confidence            578999999976 9999999999999998 8999999987766555443

>PRK05690 molybdopterin biosynthesis protein MoeB; Provisional

Probab=96.73  E-value=0.022  Score=47.85  Aligned_cols=82  Identities=21%  Similarity=0.302  Sum_probs=54.3

Q ss_pred             cCCCCCEEEEcCCCChHHHHHHHHHHHcCC-eEEEEeCCcc-------------------hHHHHHHHHHhhCC-CcEEE
Q 044010           43 EDVSGKVVIITGASSGIGEHLAYEYARRGA-CLALCARREK-------------------SLEEVADTAREIGS-PDVIT  101 (248)
Q Consensus        43 ~~~~~k~~lVtGg~~gIG~aia~~l~~~G~-~V~l~~r~~~-------------------~~~~~~~~l~~~~~-~~v~~  101 (248)
                      ..+++++++|.|+ ||+|..+++.|+..|. ++.+++.+.-                   +.+.+.+.+++..+ .++..
T Consensus        28 ~~L~~~~VliiG~-GglGs~va~~La~~Gvg~i~lvD~D~ve~sNL~Rq~l~~~~dvG~~Ka~~a~~~l~~lnp~v~i~~  106 (245)
T PRK05690         28 EKLKAARVLVVGL-GGLGCAASQYLAAAGVGTLTLVDFDTVSLSNLQRQVLHDDATIGQPKVESARAALARINPHIAIET  106 (245)
T ss_pred             HHhcCCeEEEECC-CHHHHHHHHHHHHcCCCEEEEEcCCEECcchhhhhhcCChhhCCChHHHHHHHHHHHHCCCCEEEE
Confidence            4688999999988 9999999999999997 8988877542                   34444555555543 23444


Q ss_pred             EEccCCCHHHHHHHHHHHHhHcCCccEEEEcc
Q 044010          102 IRADVSKVDDCRSLVEETMNHFGRLDHLVNNA  133 (248)
Q Consensus       102 ~~~D~~~~~~~~~~~~~~~~~~g~id~vv~~a  133 (248)
                      +...++. +...+++       .+.|++|.+.
T Consensus       107 ~~~~i~~-~~~~~~~-------~~~DiVi~~~  130 (245)
T PRK05690        107 INARLDD-DELAALI-------AGHDLVLDCT  130 (245)
T ss_pred             EeccCCH-HHHHHHH-------hcCCEEEecC
Confidence            4444432 2222222       3678887775

>PRK09496 trkA potassium transporter peripheral membrane component; Reviewed

Probab=96.72  E-value=0.0065  Score=55.33  Aligned_cols=60  Identities=27%  Similarity=0.297  Sum_probs=44.5

Q ss_pred             EEEEcCCCChHHHHHHHHHHHcCCeEEEEeCCcchHHHHHHHHHhhCCCcEEEEEccCCCHHHHHHH
Q 044010           49 VVIITGASSGIGEHLAYEYARRGACLALCARREKSLEEVADTAREIGSPDVITIRADVSKVDDCRSL  115 (248)
Q Consensus        49 ~~lVtGg~~gIG~aia~~l~~~G~~V~l~~r~~~~~~~~~~~l~~~~~~~v~~~~~D~~~~~~~~~~  115 (248)
                      +++|.|+ |.+|+++++.|.++|++|++++++++..+...+.    .  .+.++.+|.++.+.++++
T Consensus         2 ~viIiG~-G~ig~~~a~~L~~~g~~v~vid~~~~~~~~~~~~----~--~~~~~~gd~~~~~~l~~~   61 (453)
T PRK09496          2 KIIIVGA-GQVGYTLAENLSGENNDVTVIDTDEERLRRLQDR----L--DVRTVVGNGSSPDVLREA   61 (453)
T ss_pred             EEEEECC-CHHHHHHHHHHHhCCCcEEEEECCHHHHHHHHhh----c--CEEEEEeCCCCHHHHHHc
Confidence            5788887 9999999999999999999999988765544321    1  355666777776555443

>TIGR02355 moeB molybdopterin synthase sulfurylase MoeB

Probab=96.71  E-value=0.022  Score=47.65  Aligned_cols=38  Identities=26%  Similarity=0.324  Sum_probs=33.2

Q ss_pred             cCCCCCEEEEcCCCChHHHHHHHHHHHcCC-eEEEEeCCc
Q 044010           43 EDVSGKVVIITGASSGIGEHLAYEYARRGA-CLALCARRE   81 (248)
Q Consensus        43 ~~~~~k~~lVtGg~~gIG~aia~~l~~~G~-~V~l~~r~~   81 (248)
                      ..+++++++|.|+ ||+|..+++.|+..|. ++.++|++.
T Consensus        20 ~~L~~~~VlvvG~-GglGs~va~~La~~Gvg~i~lvD~D~   58 (240)
T TIGR02355        20 EALKASRVLIVGL-GGLGCAASQYLAAAGVGNLTLLDFDT   58 (240)
T ss_pred             HHHhCCcEEEECc-CHHHHHHHHHHHHcCCCEEEEEeCCc
Confidence            4688899999977 8999999999999997 899988854

This model describes the molybdopterin biosynthesis protein MoeB in E. coli and related species. The enzyme covalently modifies the molybdopterin synthase MoaD by sulfurylation. This enzyme is closely related to ThiF, a thiamine biosynthesis enzyme that modifies ThiS by an analogous adenylation. Both MoeB and ThiF belong to the HesA/MoeB/ThiF family (pfam00899).

>COG3268 Uncharacterized conserved protein [Function unknown]

Probab=96.66  E-value=0.0046  Score=53.37  Aligned_cols=78  Identities=23%  Similarity=0.280  Sum_probs=61.2

Q ss_pred             CEEEEcCCCChHHHHHHHHHHHcCCeEEEEeCCcchHHHHHHHHHhhCCCcEEEEEccCCCHHHHHHHHHHHHhHcCCcc
Q 044010           48 KVVIITGASSGIGEHLAYEYARRGACLALCARREKSLEEVADTAREIGSPDVITIRADVSKVDDCRSLVEETMNHFGRLD  127 (248)
Q Consensus        48 k~~lVtGg~~gIG~aia~~l~~~G~~V~l~~r~~~~~~~~~~~l~~~~~~~v~~~~~D~~~~~~~~~~~~~~~~~~g~id  127 (248)
                      ...+|-|++|.-|.-+|++|+.+|.+..+.+|+..+++...+.+.    .....+.+++  ++.++++++       +.+
T Consensus         7 ~d~iiYGAtGy~G~lvae~l~~~g~~~aLAgRs~~kl~~l~~~LG----~~~~~~p~~~--p~~~~~~~~-------~~~   73 (382)
T COG3268           7 YDIIIYGATGYAGGLVAEYLAREGLTAALAGRSSAKLDALRASLG----PEAAVFPLGV--PAALEAMAS-------RTQ   73 (382)
T ss_pred             eeEEEEccccchhHHHHHHHHHcCCchhhccCCHHHHHHHHHhcC----ccccccCCCC--HHHHHHHHh-------cce
Confidence            367889999999999999999999999999999998888776663    2344454444  555555544       799


Q ss_pred             EEEEccccCCc
Q 044010          128 HLVNNAGISSV  138 (248)
Q Consensus       128 ~vv~~ag~~~~  138 (248)
                      +|+|++|....
T Consensus        74 VVlncvGPyt~   84 (382)
T COG3268          74 VVLNCVGPYTR   84 (382)
T ss_pred             EEEeccccccc
Confidence            99999998764

>cd05213 NAD_bind_Glutamyl_tRNA_reduct NADP-binding domain of glutamyl-tRNA reductase

Probab=96.66  E-value=0.0093  Score=51.86  Aligned_cols=74  Identities=24%  Similarity=0.408  Sum_probs=52.7

Q ss_pred             CCCCCEEEEcCCCChHHHHHHHHHHHcCC-eEEEEeCCcchHHHHHHHHHhhCCCcEEEEEccCCCHHHHHHHHHHHHhH
Q 044010           44 DVSGKVVIITGASSGIGEHLAYEYARRGA-CLALCARREKSLEEVADTAREIGSPDVITIRADVSKVDDCRSLVEETMNH  122 (248)
Q Consensus        44 ~~~~k~~lVtGg~~gIG~aia~~l~~~G~-~V~l~~r~~~~~~~~~~~l~~~~~~~v~~~~~D~~~~~~~~~~~~~~~~~  122 (248)
                      ++.+++++|.|+ |.+|..+++.|.+.|. +|.+++|+.++.++..+++.    .  ..+     +.+++.+.+      
T Consensus       175 ~l~~~~V~ViGa-G~iG~~~a~~L~~~g~~~V~v~~r~~~ra~~la~~~g----~--~~~-----~~~~~~~~l------  236 (311)
T cd05213         175 NLKGKKVLVIGA-GEMGELAAKHLAAKGVAEITIANRTYERAEELAKELG----G--NAV-----PLDELLELL------  236 (311)
T ss_pred             CccCCEEEEECc-HHHHHHHHHHHHHcCCCEEEEEeCCHHHHHHHHHHcC----C--eEE-----eHHHHHHHH------
Confidence            478999999987 9999999999998775 89999999877666655542    1  111     223333332      


Q ss_pred             cCCccEEEEccccC
Q 044010          123 FGRLDHLVNNAGIS  136 (248)
Q Consensus       123 ~g~id~vv~~ag~~  136 (248)
                       .+.|++|.+.+..
T Consensus       237 -~~aDvVi~at~~~  249 (311)
T cd05213         237 -NEADVVISATGAP  249 (311)
T ss_pred             -hcCCEEEECCCCC
Confidence             2589999998754

Glutamyl-tRNA reductase catalyzes the conversion of glutamyl-tRNA to glutamate-1-semialdehyde, initiating the synthesis of tetrapyrrole. Whereas tRNAs are generally associated with peptide bond formation in protein translation, here the tRNA activates glutamate in the initiation of tetrapyrrole biosynthesis in archaea, plants and many bacteria. In the first step, activated glutamate is reduced to glutamate-1-semi-aldehyde via the NADPH dependent glutamyl-tRNA reductase. Glutamyl-tRNA reductase forms a V-shaped dimer. Each monomer has 3 domains: an N-terminal catalytic domain, a classic nucleotide binding domain, and a C-terminal dimerization domain. Although the representative structure 1GPJ lacks a bound NADPH, a theoretical binding pocket has been described. (PMID 11172694). Amino acid dehydrogenase (DH)-like NAD(P)-binding domains are members of the Rossmann fold superfamily and include glutamate,

>PRK09310 aroDE bifunctional 3-dehydroquinate dehydratase/shikimate dehydrogenase protein; Reviewed

Probab=96.59  E-value=0.0048  Score=56.80  Aligned_cols=46  Identities=30%  Similarity=0.413  Sum_probs=39.6

Q ss_pred             CCCCCEEEEcCCCChHHHHHHHHHHHcCCeEEEEeCCcchHHHHHHH
Q 044010           44 DVSGKVVIITGASSGIGEHLAYEYARRGACLALCARREKSLEEVADT   90 (248)
Q Consensus        44 ~~~~k~~lVtGg~~gIG~aia~~l~~~G~~V~l~~r~~~~~~~~~~~   90 (248)
                      ++++|+++|+|+ ||+|++++..|++.|++|.+.+|+.++.++..++
T Consensus       329 ~~~~k~vlIiGa-GgiG~aia~~L~~~G~~V~i~~R~~~~~~~la~~  374 (477)
T PRK09310        329 PLNNQHVAIVGA-GGAAKAIATTLARAGAELLIFNRTKAHAEALASR  374 (477)
T ss_pred             CcCCCEEEEEcC-cHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHH
Confidence            678999999996 7999999999999999999999988766655443

>PRK08223 hypothetical protein; Validated

Probab=96.56  E-value=0.025  Score=48.46  Aligned_cols=38  Identities=21%  Similarity=0.288  Sum_probs=34.0

Q ss_pred             cCCCCCEEEEcCCCChHHHHHHHHHHHcCC-eEEEEeCCc
Q 044010           43 EDVSGKVVIITGASSGIGEHLAYEYARRGA-CLALCARRE   81 (248)
Q Consensus        43 ~~~~~k~~lVtGg~~gIG~aia~~l~~~G~-~V~l~~r~~   81 (248)
                      .++++.+++|.|+ ||+|..+++.|+..|. ++.++|.+.
T Consensus        23 ~kL~~s~VlIvG~-GGLGs~va~~LA~aGVG~i~lvD~D~   61 (287)
T PRK08223         23 QRLRNSRVAIAGL-GGVGGIHLLTLARLGIGKFTIADFDV   61 (287)
T ss_pred             HHHhcCCEEEECC-CHHHHHHHHHHHHhCCCeEEEEeCCC
Confidence            4789999999977 8999999999999998 899998865

>PRK05600 thiamine biosynthesis protein ThiF; Validated

Probab=96.53  E-value=0.026  Score=50.28  Aligned_cols=37  Identities=24%  Similarity=0.386  Sum_probs=33.2

Q ss_pred             cCCCCCEEEEcCCCChHHHHHHHHHHHcCC-eEEEEeCC
Q 044010           43 EDVSGKVVIITGASSGIGEHLAYEYARRGA-CLALCARR   80 (248)
Q Consensus        43 ~~~~~k~~lVtGg~~gIG~aia~~l~~~G~-~V~l~~r~   80 (248)
                      ..+++++++|.|+ ||+|..+++.|+..|. ++.+++.+
T Consensus        37 ~~l~~~~VliiG~-GglG~~v~~~La~~Gvg~i~ivD~D   74 (370)
T PRK05600         37 ERLHNARVLVIGA-GGLGCPAMQSLASAGVGTITLIDDD   74 (370)
T ss_pred             HHhcCCcEEEECC-CHHHHHHHHHHHHcCCCEEEEEeCC
Confidence            4688999999977 8999999999999997 89999886

>PF02254 TrkA_N: TrkA-N domain; InterPro: IPR003148 The regulator of K+ conductance (RCK) domain is found in many ligand-gated K+ channels, most often attached to the intracellular carboxy terminus

Probab=96.52  E-value=0.013  Score=42.80  Aligned_cols=70  Identities=26%  Similarity=0.316  Sum_probs=50.1

Q ss_pred             EEEcCCCChHHHHHHHHHHHcCCeEEEEeCCcchHHHHHHHHHhhCCCcEEEEEccCCCHHHHHHHHHHHHhHcCCccEE
Q 044010           50 VIITGASSGIGEHLAYEYARRGACLALCARREKSLEEVADTAREIGSPDVITIRADVSKVDDCRSLVEETMNHFGRLDHL  129 (248)
Q Consensus        50 ~lVtGg~~gIG~aia~~l~~~G~~V~l~~r~~~~~~~~~~~l~~~~~~~v~~~~~D~~~~~~~~~~~~~~~~~~g~id~v  129 (248)
                      ++|.|. +.+|+.+++.|.+++.+|++++++++..+.    +++.+   +.++.+|.++.+.++++=      ..+.+.+
T Consensus         1 vvI~G~-g~~~~~i~~~L~~~~~~vvvid~d~~~~~~----~~~~~---~~~i~gd~~~~~~l~~a~------i~~a~~v   66 (116)
T PF02254_consen    1 VVIIGY-GRIGREIAEQLKEGGIDVVVIDRDPERVEE----LREEG---VEVIYGDATDPEVLERAG------IEKADAV   66 (116)
T ss_dssp             EEEES--SHHHHHHHHHHHHTTSEEEEEESSHHHHHH----HHHTT---SEEEES-TTSHHHHHHTT------GGCESEE
T ss_pred             eEEEcC-CHHHHHHHHHHHhCCCEEEEEECCcHHHHH----HHhcc---cccccccchhhhHHhhcC------ccccCEE
Confidence            466666 689999999999977799999999865444    33333   568899999998776652      1267777


Q ss_pred             EEcc
Q 044010          130 VNNA  133 (248)
Q Consensus       130 v~~a  133 (248)
                      |...
T Consensus        67 v~~~   70 (116)
T PF02254_consen   67 VILT   70 (116)
T ss_dssp             EEES
T ss_pred             EEcc
Confidence            6654

The domain is prevalent among prokaryotic K+ channels, and also found in eukaryotic, high-conductance Ca2+-activated K+ channels (BK channels) [, , ]. Largely involved in redox-linked regulation of potassium channels, the N-terminal part of the RCK domain is predicted to be an active dehydrogenase at least in some cases []. Some have a conserved sequence motif (G-x-G-x-x-G-x(n)-[DE]) for NAD+ binding [], but others do not, reflecting the diversity of ligands for RCK domains. The C-terminal part is less conserved, being absent in some channels, such as the kefC antiporter from Escherichia coli. It is predicted to bind unidentified ligands and to regulate sulphate, sodium and other transporters. The X-ray structure of several RCK domains has been solved [, , ]. It reveals an alpha-beta fold similar to dehydrogenase enzymes. The domain forms a homodimer, producing a cleft between two lobes. It has a composite structure, with an N-terminal (RCK-N), and a C-terminal (RCK-C) subdomain. The RCK-N subdomain forms a Rossmann fold with two alpha helices on one side of a six stranded parallel beta sheet and three alpha helices on the other side. The RCK-C subdomain is an all-beta-strand fold. It forms an extention of the dimer interface and further stabilises the RCK homodimer [, , ]. Ca2+ is a ligand that opens the channel in a concentration-dependent manner. Two Ca2+ ions are located at the base of a cleft between two RCK domains, coordinated by the carboxylate groups of two glutamate residues, and by an aspartate residue [, , ]. RCK domains occur in at least five different contexts: As a single domain on the C terminus of some K+ channels (for example, many prokaryotic K+ channels). As two tandem RCK domains on the C terminus of some transporters that form gating rings (for example, eukaryotic BK channels). The gating ring has an arrangement of eight identical RCK domains, one from each of the four pore-forming subunits and four from the intracellular solution. As two domains, one at the N terminus and another at the C terminus of transporter (for example, the prokaryotic trk system potassium uptake protein A). As a soluble protein (not part of a K+ channel) consisting of two tandem RCK domains. As a soluble protein consisting of a single RCK domain. This entry represents the N-terminal subdomain of RCK.; GO: 0006813 potassium ion transport; PDB: 3L4B_E 1LSS_C 3LLV_A 2FY8_D 2AEF_A 1LNQ_E 3RBX_C 3KXD_A 2AEJ_A 3RBZ_A ....

>cd05294 LDH-like_MDH_nadp A lactate dehydrogenases-like structure with malate dehydrogenase enzymatic activity

Probab=96.52  E-value=0.033  Score=48.43  Aligned_cols=116  Identities=17%  Similarity=0.170  Sum_probs=67.4

Q ss_pred             CEEEEcCCCChHHHHHHHHHHHcCC--eEEEEeCCc--chHHHHHHHHHhh---CCCcEEEEEccCC-CHHHHHHHHHHH
Q 044010           48 KVVIITGASSGIGEHLAYEYARRGA--CLALCARRE--KSLEEVADTAREI---GSPDVITIRADVS-KVDDCRSLVEET  119 (248)
Q Consensus        48 k~~lVtGg~~gIG~aia~~l~~~G~--~V~l~~r~~--~~~~~~~~~l~~~---~~~~v~~~~~D~~-~~~~~~~~~~~~  119 (248)
                      +++.|+|++|.+|..++..|+..|.  +|++++|++  ++++.....+.+.   .+....   +..+ |.+         
T Consensus         1 ~kI~IiGatG~vG~~~a~~l~~~g~~~~v~lvd~~~~~~~l~~~~~dl~d~~~~~~~~~~---i~~~~d~~---------   68 (309)
T cd05294           1 MKVSIIGASGRVGSATALLLAKEDVVKEINLISRPKSLEKLKGLRLDIYDALAAAGIDAE---IKISSDLS---------   68 (309)
T ss_pred             CEEEEECCCChHHHHHHHHHHhCCCCCEEEEEECcccccccccccchhhhchhccCCCcE---EEECCCHH---------
Confidence            3688999999999999999999986  599999965  4444433333321   110111   1111 211         


Q ss_pred             HhHcCCccEEEEccccCCcccccccCChHHHHHHHHhhhHHHHHHHHHHhhhhhhcCCeEEEEcCcc
Q 044010          120 MNHFGRLDHLVNNAGISSVALFEDIVNITDFKQIMNINFWGSVYTTRFAVPHLRYTKGKIVVLSSAA  186 (248)
Q Consensus       120 ~~~~g~id~vv~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~g~iV~isS~~  186 (248)
                        .+.+.|++|.++|.....   . .+   -.+.+..|+.-...+.+.+.+..  .++.++++++..
T Consensus        69 --~l~~aDiViitag~p~~~---~-~~---r~dl~~~n~~i~~~~~~~i~~~~--~~~~viv~~npv  124 (309)
T cd05294          69 --DVAGSDIVIITAGVPRKE---G-MS---RLDLAKKNAKIVKKYAKQIAEFA--PDTKILVVTNPV  124 (309)
T ss_pred             --HhCCCCEEEEecCCCCCC---C-CC---HHHHHHHHHHHHHHHHHHHHHHC--CCeEEEEeCCch
Confidence              124799999999975321   1 12   12444445555544445444332  246777777643

The LDH-like MDH proteins have a lactate dehyhydrogenase-like (LDH-like) structure and malate dehydrogenase (MDH) enzymatic activity. This subgroup is composed of some archaeal LDH-like MDHs that prefer NADP(H) rather than NAD(H) as a cofactor. One member, MJ0490 from Methanococcus jannaschii, has been observed to form dimers and tetramers during crystalization, although it is believed to exist primarilly as a tetramer in solution. In addition to its MDH activity, MJ0490 also possesses fructose-1,6-bisphosphate-activated LDH activity. Members of this subgroup have a higher sequence similarity to LDHs than to other MDHs. LDH catalyzes the last step of glycolysis in which pyruvate is converted to L-lactate. MDH is one of the key enzymes in the citric acid cycle, facilitating both the conversion of malate to oxaloacetate and replenishing levels of oxalacetate by reductive carbox

>COG1064 AdhP Zn-dependent alcohol dehydrogenases [General function prediction only]

Probab=96.51  E-value=0.015  Score=50.81  Aligned_cols=73  Identities=27%  Similarity=0.366  Sum_probs=51.8

Q ss_pred             CCCEEEEcCCCChHHHHHHHHHHHcCCeEEEEeCCcchHHHHHHHHHhhCCCcEEEEEccCCCHHHHHHHHHHHHhHcCC
Q 044010           46 SGKVVIITGASSGIGEHLAYEYARRGACLALCARREKSLEEVADTAREIGSPDVITIRADVSKVDDCRSLVEETMNHFGR  125 (248)
Q Consensus        46 ~~k~~lVtGg~~gIG~aia~~l~~~G~~V~l~~r~~~~~~~~~~~l~~~~~~~v~~~~~D~~~~~~~~~~~~~~~~~~g~  125 (248)
                      .|++++|+|.+ |+|...++-....|++|+.++|++++.+.+.+.    +. +   +..|-+|.+..+++.+       .
T Consensus       166 pG~~V~I~G~G-GlGh~avQ~Aka~ga~Via~~~~~~K~e~a~~l----GA-d---~~i~~~~~~~~~~~~~-------~  229 (339)
T COG1064         166 PGKWVAVVGAG-GLGHMAVQYAKAMGAEVIAITRSEEKLELAKKL----GA-D---HVINSSDSDALEAVKE-------I  229 (339)
T ss_pred             CCCEEEEECCc-HHHHHHHHHHHHcCCeEEEEeCChHHHHHHHHh----CC-c---EEEEcCCchhhHHhHh-------h
Confidence            59999999998 999877776666899999999999876655432    22 1   2234445544444333       2


Q ss_pred             ccEEEEccc
Q 044010          126 LDHLVNNAG  134 (248)
Q Consensus       126 id~vv~~ag  134 (248)
                      +|+++.+++
T Consensus       230 ~d~ii~tv~  238 (339)
T COG1064         230 ADAIIDTVG  238 (339)
T ss_pred             CcEEEECCC
Confidence            999999987

>PLN02602 lactate dehydrogenase

Probab=96.50  E-value=0.11  Score=45.82  Aligned_cols=112  Identities=17%  Similarity=0.167  Sum_probs=69.0

Q ss_pred             CEEEEcCCCChHHHHHHHHHHHcCC--eEEEEeCCcchHHHHHHHHHhhCC--CcEEEEEccCCCHHHHHHHHHHHHhHc
Q 044010           48 KVVIITGASSGIGEHLAYEYARRGA--CLALCARREKSLEEVADTAREIGS--PDVITIRADVSKVDDCRSLVEETMNHF  123 (248)
Q Consensus        48 k~~lVtGg~~gIG~aia~~l~~~G~--~V~l~~r~~~~~~~~~~~l~~~~~--~~v~~~~~D~~~~~~~~~~~~~~~~~~  123 (248)
                      +++.|+|+ |.+|.++|..|+.+|.  ++++.+.++++++.....+.....  .... +.. -.+.           +++
T Consensus        38 ~KI~IIGa-G~VG~~~a~~l~~~~l~~el~LiDi~~~~~~g~a~DL~~~~~~~~~~~-i~~-~~dy-----------~~~  103 (350)
T PLN02602         38 TKVSVVGV-GNVGMAIAQTILTQDLADELALVDVNPDKLRGEMLDLQHAAAFLPRTK-ILA-STDY-----------AVT  103 (350)
T ss_pred             CEEEEECC-CHHHHHHHHHHHhCCCCCEEEEEeCCCchhhHHHHHHHhhhhcCCCCE-EEe-CCCH-----------HHh
Confidence            68999996 9999999999998875  799999998877766666654321  1121 211 1122           123


Q ss_pred             CCccEEEEccccCCcccccccCChHHHHHHHHhhhHHHHHHHHHHhhhhhh--cCCeEEEEcC
Q 044010          124 GRLDHLVNNAGISSVALFEDIVNITDFKQIMNINFWGSVYTTRFAVPHLRY--TKGKIVVLSS  184 (248)
Q Consensus       124 g~id~vv~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~--~~g~iV~isS  184 (248)
                      .+-|++|.+||.....   . .+.   .+.+..|..-    ++.+.+.+.+  .++.++++|-
T Consensus       104 ~daDiVVitAG~~~k~---g-~tR---~dll~~N~~I----~~~i~~~I~~~~p~~ivivvtN  155 (350)
T PLN02602        104 AGSDLCIVTAGARQIP---G-ESR---LNLLQRNVAL----FRKIIPELAKYSPDTILLIVSN  155 (350)
T ss_pred             CCCCEEEECCCCCCCc---C-CCH---HHHHHHHHHH----HHHHHHHHHHHCCCeEEEEecC
Confidence            4899999999975322   1 122   2344445444    3444444432  2467777774

>TIGR02354 thiF_fam2 thiamine biosynthesis protein ThiF, family 2

Probab=96.50  E-value=0.036  Score=45.00  Aligned_cols=37  Identities=30%  Similarity=0.446  Sum_probs=33.9

Q ss_pred             cCCCCCEEEEcCCCChHHHHHHHHHHHcCC-eEEEEeCC
Q 044010           43 EDVSGKVVIITGASSGIGEHLAYEYARRGA-CLALCARR   80 (248)
Q Consensus        43 ~~~~~k~~lVtGg~~gIG~aia~~l~~~G~-~V~l~~r~   80 (248)
                      .++++++++|.|+ ||+|..+++.|+..|. ++.+.|++
T Consensus        17 ~~L~~~~V~IvG~-GglGs~ia~~La~~Gvg~i~lvD~D   54 (200)
T TIGR02354        17 QKLEQATVAICGL-GGLGSNVAINLARAGIGKLILVDFD   54 (200)
T ss_pred             HHHhCCcEEEECc-CHHHHHHHHHHHHcCCCEEEEECCC
Confidence            4788999999988 8999999999999998 79999997

Members of the HesA/MoeB/ThiF family of proteins (pfam00899) include a number of members encoded in the midst of thiamine biosynthetic operons. This mix of known and putative ThiF proteins shows a deep split in phylogenetic trees, with one the E. coli ThiF and the E. coli MoeB proteins seemingly more closely related than E. coli ThiF and Campylobacter (for example) ThiF. This model represents the divergent clade of putative ThiF proteins such found in Campylobacter.

>PRK08306 dipicolinate synthase subunit A; Reviewed

Probab=96.47  E-value=0.014  Score=50.33  Aligned_cols=40  Identities=25%  Similarity=0.336  Sum_probs=35.6

Q ss_pred             cCCCCCEEEEcCCCChHHHHHHHHHHHcCCeEEEEeCCcch
Q 044010           43 EDVSGKVVIITGASSGIGEHLAYEYARRGACLALCARREKS   83 (248)
Q Consensus        43 ~~~~~k~~lVtGg~~gIG~aia~~l~~~G~~V~l~~r~~~~   83 (248)
                      .++.+++++|.|. |++|+.++..|...|++|.+.+|+.++
T Consensus       148 ~~l~g~kvlViG~-G~iG~~~a~~L~~~Ga~V~v~~r~~~~  187 (296)
T PRK08306        148 ITIHGSNVLVLGF-GRTGMTLARTLKALGANVTVGARKSAH  187 (296)
T ss_pred             CCCCCCEEEEECC-cHHHHHHHHHHHHCCCEEEEEECCHHH
Confidence            3678999999997 789999999999999999999998654

>cd01487 E1_ThiF_like E1_ThiF_like

Probab=96.46  E-value=0.034  Score=44.14  Aligned_cols=31  Identities=39%  Similarity=0.488  Sum_probs=27.4

Q ss_pred             EEEcCCCChHHHHHHHHHHHcCC-eEEEEeCCc
Q 044010           50 VIITGASSGIGEHLAYEYARRGA-CLALCARRE   81 (248)
Q Consensus        50 ~lVtGg~~gIG~aia~~l~~~G~-~V~l~~r~~   81 (248)
                      ++|.|+ ||+|..+++.|+..|. ++.++|.+.
T Consensus         2 VlViG~-GglGs~ia~~La~~Gvg~i~lvD~D~   33 (174)
T cd01487           2 VGIAGA-GGLGSNIAVLLARSGVGNLKLVDFDV   33 (174)
T ss_pred             EEEECc-CHHHHHHHHHHHHcCCCeEEEEeCCE
Confidence            677775 8999999999999998 799999976

Member of superfamily of activating enzymes (E1) of the ubiquitin-like proteins. The common reaction mechanism catalyzed by E1-like enzymes begins with a nucleophilic attack of the C-terminal carboxylate of the ubiquitin-like substrate, on the alpha-phosphate of an ATP molecule bound at the active site of the activating enzymes, leading to the formation of a high-energy acyladenylate intermediate and subsequently to the formation of a thiocarboxylate at the C termini of the substrate. The exact function of this family is unknown.

>PLN00203 glutamyl-tRNA reductase

Probab=96.45  E-value=0.013  Score=54.37  Aligned_cols=47  Identities=17%  Similarity=0.350  Sum_probs=41.0

Q ss_pred             CCCCCEEEEcCCCChHHHHHHHHHHHcCC-eEEEEeCCcchHHHHHHHH
Q 044010           44 DVSGKVVIITGASSGIGEHLAYEYARRGA-CLALCARREKSLEEVADTA   91 (248)
Q Consensus        44 ~~~~k~~lVtGg~~gIG~aia~~l~~~G~-~V~l~~r~~~~~~~~~~~l   91 (248)
                      ++++++++|.|+ |++|..+++.|...|. +|.+..|+.++.+...+++
T Consensus       263 ~l~~kkVlVIGA-G~mG~~~a~~L~~~G~~~V~V~nRs~era~~La~~~  310 (519)
T PLN00203        263 SHASARVLVIGA-GKMGKLLVKHLVSKGCTKMVVVNRSEERVAALREEF  310 (519)
T ss_pred             CCCCCEEEEEeC-HHHHHHHHHHHHhCCCCeEEEEeCCHHHHHHHHHHh
Confidence            488999999988 9999999999999997 7999999988777766554

>PRK04308 murD UDP-N-acetylmuramoyl-L-alanyl-D-glutamate synthetase; Provisional

Probab=96.45  E-value=0.024  Score=51.67  Aligned_cols=80  Identities=19%  Similarity=0.204  Sum_probs=52.9

Q ss_pred             cCCCCCEEEEcCCCChHHHHHHHHHHHcCCeEEEEeCCcchHHHHHHHHHhhCCCcEEEEEccCCCHHHHHHHHHHHHhH
Q 044010           43 EDVSGKVVIITGASSGIGEHLAYEYARRGACLALCARREKSLEEVADTAREIGSPDVITIRADVSKVDDCRSLVEETMNH  122 (248)
Q Consensus        43 ~~~~~k~~lVtGg~~gIG~aia~~l~~~G~~V~l~~r~~~~~~~~~~~l~~~~~~~v~~~~~D~~~~~~~~~~~~~~~~~  122 (248)
                      |++.+|+++|+|.+ ++|.++|+.|+++|++|.+.+.+...  ...++++... ..+.++..+.. ..    .       
T Consensus         1 ~~~~~~~~~v~G~g-~~G~~~a~~l~~~g~~v~~~d~~~~~--~~~~~l~~~~-~gi~~~~g~~~-~~----~-------   64 (445)
T PRK04308          1 MTFQNKKILVAGLG-GTGISMIAYLRKNGAEVAAYDAELKP--ERVAQIGKMF-DGLVFYTGRLK-DA----L-------   64 (445)
T ss_pred             CCCCCCEEEEECCC-HHHHHHHHHHHHCCCEEEEEeCCCCc--hhHHHHhhcc-CCcEEEeCCCC-HH----H-------
Confidence            35778999999985 99999999999999999999876543  1122343321 13444332211 11    1       


Q ss_pred             cCCccEEEEccccCCc
Q 044010          123 FGRLDHLVNNAGISSV  138 (248)
Q Consensus       123 ~g~id~vv~~ag~~~~  138 (248)
                      ..+.|.||...|+.+.
T Consensus        65 ~~~~d~vv~spgi~~~   80 (445)
T PRK04308         65 DNGFDILALSPGISER   80 (445)
T ss_pred             HhCCCEEEECCCCCCC
Confidence            1368999999998753

>cd00650 LDH_MDH_like NAD-dependent, lactate dehydrogenase-like, 2-hydroxycarboxylate dehydrogenase family

Probab=96.43  E-value=0.029  Score=47.52  Aligned_cols=79  Identities=27%  Similarity=0.328  Sum_probs=53.8

Q ss_pred             EEEcCCCChHHHHHHHHHHHcC----CeEEEEeCCcchHHHHHHHHHhhCCCcEEEEEccCCCHHHHHHHHHHHHhHcCC
Q 044010           50 VIITGASSGIGEHLAYEYARRG----ACLALCARREKSLEEVADTAREIGSPDVITIRADVSKVDDCRSLVEETMNHFGR  125 (248)
Q Consensus        50 ~lVtGg~~gIG~aia~~l~~~G----~~V~l~~r~~~~~~~~~~~l~~~~~~~v~~~~~D~~~~~~~~~~~~~~~~~~g~  125 (248)
                      +.|.|++|.+|..++..|+..|    .+|++.|+++++++.....++......   ....++-.++.++       .+.+
T Consensus         1 I~IIGagG~vG~~ia~~l~~~~~~~~~el~L~D~~~~~l~~~~~dl~~~~~~~---~~~~i~~~~d~~~-------~~~~   70 (263)
T cd00650           1 IAVIGAGGNVGPALAFGLADGSVLLAIELVLYDIDEEKLKGVAMDLQDAVEPL---ADIKVSITDDPYE-------AFKD   70 (263)
T ss_pred             CEEECCCChHHHHHHHHHHhCCCCcceEEEEEeCCcccchHHHHHHHHhhhhc---cCcEEEECCchHH-------HhCC
Confidence            3688998899999999999998    689999999988887777666543211   0111111111222       2347


Q ss_pred             ccEEEEccccCCc
Q 044010          126 LDHLVNNAGISSV  138 (248)
Q Consensus       126 id~vv~~ag~~~~  138 (248)
                      .|++|..+|....
T Consensus        71 aDiVv~t~~~~~~   83 (263)
T cd00650          71 ADVVIITAGVGRK   83 (263)
T ss_pred             CCEEEECCCCCCC
Confidence            9999999997643

Members of this family include ubiquitous enzymes like L-lactate dehydrogenases (LDH), L-2-hydroxyisocaproate dehydrogenases, and some malate dehydrogenases (MDH). LDH catalyzes the last step of glycolysis in which pyruvate is converted to L-lactate. MDH is one of the key enzymes in the citric acid cycle, facilitating both the conversion of malate to oxaloacetate and replenishing levels of oxalacetate by reductive carboxylation of pyruvate. The LDH/MDH-like proteins are part of the NAD(P)-binding Rossmann fold superfamily, which includes a wide variety of protein families including the NAD(P)-binding domains of alcohol dehydrogenases, tyrosine-dependent oxidoreductases, glyceraldehyde-3-phosphate dehydrogenases, formate/glycerate dehydrogenases, siroheme synthases, 6-phosphogluconate dehydrogenases, aminoacid dehydrogenases, repressor rex, and NAD-binding potassium channel domains

>PRK06719 precorrin-2 dehydrogenase; Validated

Probab=96.41  E-value=0.023  Score=44.32  Aligned_cols=36  Identities=25%  Similarity=0.325  Sum_probs=32.7

Q ss_pred             cCCCCCEEEEcCCCChHHHHHHHHHHHcCCeEEEEeC
Q 044010           43 EDVSGKVVIITGASSGIGEHLAYEYARRGACLALCAR   79 (248)
Q Consensus        43 ~~~~~k~~lVtGg~~gIG~aia~~l~~~G~~V~l~~r   79 (248)
                      .+++||.++|.|| |.+|...++.|++.|++|.+++.
T Consensus         9 l~l~~~~vlVvGG-G~va~rka~~Ll~~ga~V~VIsp   44 (157)
T PRK06719          9 FNLHNKVVVIIGG-GKIAYRKASGLKDTGAFVTVVSP   44 (157)
T ss_pred             EEcCCCEEEEECC-CHHHHHHHHHHHhCCCEEEEEcC
Confidence            4899999999987 78999999999999999998864

>PRK04148 hypothetical protein; Provisional

Probab=96.41  E-value=0.034  Score=42.11  Aligned_cols=56  Identities=14%  Similarity=0.138  Sum_probs=43.3

Q ss_pred             CCCCEEEEcCCCChHHHHHHHHHHHcCCeEEEEeCCcchHHHHHHHHHhhCCCcEEEEEccCCCH
Q 044010           45 VSGKVVIITGASSGIGEHLAYEYARRGACLALCARREKSLEEVADTAREIGSPDVITIRADVSKV  109 (248)
Q Consensus        45 ~~~k~~lVtGg~~gIG~aia~~l~~~G~~V~l~~r~~~~~~~~~~~l~~~~~~~v~~~~~D~~~~  109 (248)
                      -+++++++.|.+  .|.++|..|++.|++|+.++.++...+.+.+    .   .+.++..|+.+.
T Consensus        15 ~~~~kileIG~G--fG~~vA~~L~~~G~~ViaIDi~~~aV~~a~~----~---~~~~v~dDlf~p   70 (134)
T PRK04148         15 GKNKKIVELGIG--FYFKVAKKLKESGFDVIVIDINEKAVEKAKK----L---GLNAFVDDLFNP   70 (134)
T ss_pred             ccCCEEEEEEec--CCHHHHHHHHHCCCEEEEEECCHHHHHHHHH----h---CCeEEECcCCCC
Confidence            356789999987  7888899999999999999999875444432    2   356788888774

>PLN02819 lysine-ketoglutarate reductase/saccharopine dehydrogenase

Probab=96.40  E-value=0.013  Score=58.54  Aligned_cols=79  Identities=18%  Similarity=0.168  Sum_probs=60.8

Q ss_pred             CCCCEEEEcCCCChHHHHHHHHHHHcC-Ce-------------EEEEeCCcchHHHHHHHHHhhCCCcEEEEEccCCCHH
Q 044010           45 VSGKVVIITGASSGIGEHLAYEYARRG-AC-------------LALCARREKSLEEVADTAREIGSPDVITIRADVSKVD  110 (248)
Q Consensus        45 ~~~k~~lVtGg~~gIG~aia~~l~~~G-~~-------------V~l~~r~~~~~~~~~~~l~~~~~~~v~~~~~D~~~~~  110 (248)
                      -+.|.++|.|+ |.+|...++.|++.+ ++             |.+++++.+.+++..+..     ..+..+++|++|.+
T Consensus       567 ~~~~rIlVLGA-G~VG~~~a~~La~~~~~~~~~~~~~~~~~~lV~VaD~~~~~a~~la~~~-----~~~~~v~lDv~D~e  640 (1042)
T PLN02819        567 KKSQNVLILGA-GRVCRPAAEYLASVKTISYYGDDSEEPTDVHVIVASLYLKDAKETVEGI-----ENAEAVQLDVSDSE  640 (1042)
T ss_pred             ccCCcEEEECC-CHHHHHHHHHHHhCcCccccccccccccccEEEEECCCHHHHHHHHHhc-----CCCceEEeecCCHH
Confidence            35678999987 999999999999763 34             888888877666555433     14667999999998


Q ss_pred             HHHHHHHHHHhHcCCccEEEEccccC
Q 044010          111 DCRSLVEETMNHFGRLDHLVNNAGIS  136 (248)
Q Consensus       111 ~~~~~~~~~~~~~g~id~vv~~ag~~  136 (248)
                      ++.++++       ++|+||++....
T Consensus       641 ~L~~~v~-------~~DaVIsalP~~  659 (1042)
T PLN02819        641 SLLKYVS-------QVDVVISLLPAS  659 (1042)
T ss_pred             HHHHhhc-------CCCEEEECCCch
Confidence            8777655       599999998754

>TIGR02824 quinone_pig3 putative NAD(P)H quinone oxidoreductase, PIG3 family

Probab=96.39  E-value=0.016  Score=49.44  Aligned_cols=79  Identities=22%  Similarity=0.284  Sum_probs=51.1

Q ss_pred             CCCEEEEcCCCChHHHHHHHHHHHcCCeEEEEeCCcchHHHHHHHHHhhCCCcEEEEEccCCCHHHHHHHHHHHHhHcCC
Q 044010           46 SGKVVIITGASSGIGEHLAYEYARRGACLALCARREKSLEEVADTAREIGSPDVITIRADVSKVDDCRSLVEETMNHFGR  125 (248)
Q Consensus        46 ~~k~~lVtGg~~gIG~aia~~l~~~G~~V~l~~r~~~~~~~~~~~l~~~~~~~v~~~~~D~~~~~~~~~~~~~~~~~~g~  125 (248)
                      +|++++|+|+++++|.++++.+...|++|+++.+++++.+..    ++.+- .   ...+..+.+....+.+ ... .+.
T Consensus       139 ~~~~vlv~g~~~~~g~~~~~~a~~~g~~v~~~~~~~~~~~~~----~~~g~-~---~~~~~~~~~~~~~~~~-~~~-~~~  208 (325)
T TIGR02824       139 AGETVLIHGGASGIGTTAIQLAKAFGARVFTTAGSDEKCAAC----EALGA-D---IAINYREEDFVEVVKA-ETG-GKG  208 (325)
T ss_pred             CCCEEEEEcCcchHHHHHHHHHHHcCCEEEEEeCCHHHHHHH----HHcCC-c---EEEecCchhHHHHHHH-HcC-CCC
Confidence            578999999999999999998889999999998877654422    22221 1   1123333332222222 111 125


Q ss_pred             ccEEEEccc
Q 044010          126 LDHLVNNAG  134 (248)
Q Consensus       126 id~vv~~ag  134 (248)
                      +|.+++++|
T Consensus       209 ~d~~i~~~~  217 (325)
T TIGR02824       209 VDVILDIVG  217 (325)
T ss_pred             eEEEEECCc
Confidence            999999876

Members of this family are putative quinone oxidoreductases that belong to the broader superfamily (modeled by Pfam pfam00107) of zinc-dependent alcohol (of medium chain length) dehydrogenases and quinone oxiooreductases. The alignment shows no motif of conserved Cys residues as are found in zinc-binding members of the superfamily, and members are likely to be quinone oxidoreductases instead. A member of this family in Homo sapiens, PIG3, is induced by p53 but is otherwise uncharacterized.

>PRK10669 putative cation:proton antiport protein; Provisional

Probab=96.38  E-value=0.024  Score=53.27  Aligned_cols=70  Identities=11%  Similarity=0.165  Sum_probs=51.5

Q ss_pred             EEEEcCCCChHHHHHHHHHHHcCCeEEEEeCCcchHHHHHHHHHhhCCCcEEEEEccCCCHHHHHHHHHHHHhHcCCccE
Q 044010           49 VVIITGASSGIGEHLAYEYARRGACLALCARREKSLEEVADTAREIGSPDVITIRADVSKVDDCRSLVEETMNHFGRLDH  128 (248)
Q Consensus        49 ~~lVtGg~~gIG~aia~~l~~~G~~V~l~~r~~~~~~~~~~~l~~~~~~~v~~~~~D~~~~~~~~~~~~~~~~~~g~id~  128 (248)
                      +++|.|. |.+|++++++|.++|+++++++.|+++.++..    +.   ....+..|.+|++.++++=      ..+.|.
T Consensus       419 hiiI~G~-G~~G~~la~~L~~~g~~vvvId~d~~~~~~~~----~~---g~~~i~GD~~~~~~L~~a~------i~~a~~  484 (558)
T PRK10669        419 HALLVGY-GRVGSLLGEKLLAAGIPLVVIETSRTRVDELR----ER---GIRAVLGNAANEEIMQLAH------LDCARW  484 (558)
T ss_pred             CEEEECC-ChHHHHHHHHHHHCCCCEEEEECCHHHHHHHH----HC---CCeEEEcCCCCHHHHHhcC------ccccCE
Confidence            5666655 88999999999999999999999987655443    21   4678899999987765541      125666


Q ss_pred             EEEc
Q 044010          129 LVNN  132 (248)
Q Consensus       129 vv~~  132 (248)
                      ++-+
T Consensus       485 viv~  488 (558)
T PRK10669        485 LLLT  488 (558)
T ss_pred             EEEE
Confidence            6544

>cd01483 E1_enzyme_family Superfamily of activating enzymes (E1) of the ubiquitin-like proteins

Probab=96.37  E-value=0.053  Score=41.32  Aligned_cols=31  Identities=29%  Similarity=0.526  Sum_probs=26.7

Q ss_pred             EEEEcCCCChHHHHHHHHHHHcCC-eEEEEeCC
Q 044010           49 VVIITGASSGIGEHLAYEYARRGA-CLALCARR   80 (248)
Q Consensus        49 ~~lVtGg~~gIG~aia~~l~~~G~-~V~l~~r~   80 (248)
                      +++|.|+ ||+|.++++.|+..|. ++.+++.+
T Consensus         1 ~VliiG~-GglGs~ia~~L~~~Gv~~i~ivD~d   32 (143)
T cd01483           1 RVLLVGL-GGLGSEIALNLARSGVGKITLIDFD   32 (143)
T ss_pred             CEEEECC-CHHHHHHHHHHHHCCCCEEEEEcCC
Confidence            3677776 8999999999999998 79998765

This family includes classical ubiquitin-activating enzymes E1, ubiquitin-like (ubl) activating enzymes and other mechanistic homologes, like MoeB, Thif1 and others. The common reaction mechanism catalyzed by MoeB, ThiF and the E1 enzymes begins with a nucleophilic attack of the C-terminal carboxylate of MoaD, ThiS and ubiquitin, respectively, on the alpha-phosphate of an ATP molecule bound at the active site of the activating enzymes, leading to the formation of a high-energy acyladenylate intermediate and subsequently to the formation of a thiocarboxylate at the C termini of MoaD and ThiS.

>cd08294 leukotriene_B4_DH_like 13-PGR is a bifunctional enzyme with delta-13 15-prostaglandin reductase and leukotriene B4 12 hydroxydehydrogenase activity

Probab=96.34  E-value=0.018  Score=49.73  Aligned_cols=78  Identities=19%  Similarity=0.370  Sum_probs=50.7

Q ss_pred             CCCEEEEcCCCChHHHHHHHHHHHcCCeEEEEeCCcchHHHHHHHHHhhCCCcEEEEEccCCCHHHHHHHHHHHHhHcCC
Q 044010           46 SGKVVIITGASSGIGEHLAYEYARRGACLALCARREKSLEEVADTAREIGSPDVITIRADVSKVDDCRSLVEETMNHFGR  125 (248)
Q Consensus        46 ~~k~~lVtGg~~gIG~aia~~l~~~G~~V~l~~r~~~~~~~~~~~l~~~~~~~v~~~~~D~~~~~~~~~~~~~~~~~~g~  125 (248)
                      +|.+++|+||+|++|..+++.+...|++|+.+.+++++.+.+    ++.+-..  +  .|..+.+ ..+.+.+...  +.
T Consensus       143 ~g~~vlI~ga~g~vG~~aiqlA~~~G~~vi~~~~s~~~~~~l----~~~Ga~~--v--i~~~~~~-~~~~v~~~~~--~g  211 (329)
T cd08294         143 AGETVVVNGAAGAVGSLVGQIAKIKGCKVIGCAGSDDKVAWL----KELGFDA--V--FNYKTVS-LEEALKEAAP--DG  211 (329)
T ss_pred             CCCEEEEecCccHHHHHHHHHHHHcCCEEEEEeCCHHHHHHH----HHcCCCE--E--EeCCCcc-HHHHHHHHCC--CC
Confidence            588999999999999998887778899999888877654433    3333211  1  2333332 2222222211  36


Q ss_pred             ccEEEEccc
Q 044010          126 LDHLVNNAG  134 (248)
Q Consensus       126 id~vv~~ag  134 (248)
                      +|+++.+.|
T Consensus       212 vd~vld~~g  220 (329)
T cd08294         212 IDCYFDNVG  220 (329)
T ss_pred             cEEEEECCC
Confidence            999998876

Prostaglandins and related eicosanoids are metabolized by the oxidation of the 15(S)-hydroxyl group of the NAD+-dependent (type I 15-PGDH) 15-prostaglandin dehydrogenase (15-PGDH) followed by reduction by NADPH/NADH-dependent (type II 15-PGDH) delta-13 15-prostaglandin reductase (13-PGR) to 15-keto- 13,14,-dihydroprostaglandins. 13-PGR is a bifunctional enzyme, since it also has leukotriene B(4) 12-hydroxydehydrogenase activity. These 15-PGDH and related enzymes are members of the medium chain dehydrogenase/reductase family. The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of ac

>PRK09880 L-idonate 5-dehydrogenase; Provisional

Probab=96.33  E-value=0.018  Score=50.45  Aligned_cols=77  Identities=22%  Similarity=0.264  Sum_probs=50.4

Q ss_pred             CCCCEEEEcCCCChHHHHHHHHHHHcCC-eEEEEeCCcchHHHHHHHHHhhCCCcEEEEEccCCCHHHHHHHHHHHHhHc
Q 044010           45 VSGKVVIITGASSGIGEHLAYEYARRGA-CLALCARREKSLEEVADTAREIGSPDVITIRADVSKVDDCRSLVEETMNHF  123 (248)
Q Consensus        45 ~~~k~~lVtGg~~gIG~aia~~l~~~G~-~V~l~~r~~~~~~~~~~~l~~~~~~~v~~~~~D~~~~~~~~~~~~~~~~~~  123 (248)
                      .+|++++|+|+ |++|...++.+...|+ +|+++++++++.+.+    ++.+...    ..|..+. ++.+    ..+..
T Consensus       168 ~~g~~VlV~G~-G~vG~~aiqlak~~G~~~Vi~~~~~~~~~~~a----~~lGa~~----vi~~~~~-~~~~----~~~~~  233 (343)
T PRK09880        168 LQGKRVFVSGV-GPIGCLIVAAVKTLGAAEIVCADVSPRSLSLA----REMGADK----LVNPQND-DLDH----YKAEK  233 (343)
T ss_pred             CCCCEEEEECC-CHHHHHHHHHHHHcCCcEEEEEeCCHHHHHHH----HHcCCcE----EecCCcc-cHHH----HhccC
Confidence            36899999986 8999999887777898 688888887655432    3333221    2344432 2322    22223


Q ss_pred             CCccEEEEcccc
Q 044010          124 GRLDHLVNNAGI  135 (248)
Q Consensus       124 g~id~vv~~ag~  135 (248)
                      +.+|+++.++|.
T Consensus       234 g~~D~vid~~G~  245 (343)
T PRK09880        234 GYFDVSFEVSGH  245 (343)
T ss_pred             CCCCEEEECCCC
Confidence            569999999873

>PRK14192 bifunctional 5,10-methylene-tetrahydrofolate dehydrogenase/ 5,10-methylene-tetrahydrofolate cyclohydrolase; Provisional

Probab=96.32  E-value=0.018  Score=49.29  Aligned_cols=38  Identities=24%  Similarity=0.488  Sum_probs=34.5

Q ss_pred             cCCCCCEEEEcCCCChHHHHHHHHHHHcCCeEEEEeCC
Q 044010           43 EDVSGKVVIITGASSGIGEHLAYEYARRGACLALCARR   80 (248)
Q Consensus        43 ~~~~~k~~lVtGg~~gIG~aia~~l~~~G~~V~l~~r~   80 (248)
                      -+++||+++|.|.++-.|++++..|+++|++|.++.|.
T Consensus       155 i~l~Gk~vvViG~gg~vGkpia~~L~~~gatVtv~~~~  192 (283)
T PRK14192        155 IELAGKHAVVVGRSAILGKPMAMMLLNANATVTICHSR  192 (283)
T ss_pred             CCCCCCEEEEECCcHHHHHHHHHHHHhCCCEEEEEeCC
Confidence            47899999999998779999999999999999998773

>PRK08328 hypothetical protein; Provisional

Probab=96.32  E-value=0.016  Score=48.11  Aligned_cols=39  Identities=26%  Similarity=0.438  Sum_probs=34.0

Q ss_pred             cCCCCCEEEEcCCCChHHHHHHHHHHHcCC-eEEEEeCCcc
Q 044010           43 EDVSGKVVIITGASSGIGEHLAYEYARRGA-CLALCARREK   82 (248)
Q Consensus        43 ~~~~~k~~lVtGg~~gIG~aia~~l~~~G~-~V~l~~r~~~   82 (248)
                      .++++++++|.|+ ||+|.++++.|+..|. ++.++|.+.-
T Consensus        23 ~~L~~~~VlIiG~-GGlGs~ia~~La~~Gvg~i~lvD~D~v   62 (231)
T PRK08328         23 EKLKKAKVAVVGV-GGLGSPVAYYLAAAGVGRILLIDEQTP   62 (231)
T ss_pred             HHHhCCcEEEECC-CHHHHHHHHHHHHcCCCEEEEEcCCcc
Confidence            4788999999977 7999999999999998 8999987653

>cd05288 PGDH Prostaglandin dehydrogenases

Probab=96.31  E-value=0.023  Score=49.04  Aligned_cols=79  Identities=19%  Similarity=0.260  Sum_probs=51.1

Q ss_pred             CCCEEEEcCCCChHHHHHHHHHHHcCCeEEEEeCCcchHHHHHHHHHhhCCCcEEEEEccCCCHHHHHHHHHHHHhHcCC
Q 044010           46 SGKVVIITGASSGIGEHLAYEYARRGACLALCARREKSLEEVADTAREIGSPDVITIRADVSKVDDCRSLVEETMNHFGR  125 (248)
Q Consensus        46 ~~k~~lVtGg~~gIG~aia~~l~~~G~~V~l~~r~~~~~~~~~~~l~~~~~~~v~~~~~D~~~~~~~~~~~~~~~~~~g~  125 (248)
                      ++.+++|.|+++++|.++++.+.+.|++|+.++++.++.+.+.+.+   +- . .+  .|..+.+..+++. +...  +.
T Consensus       145 ~~~~vlI~g~~g~ig~~~~~~a~~~G~~vi~~~~~~~~~~~~~~~~---g~-~-~~--~~~~~~~~~~~v~-~~~~--~~  214 (329)
T cd05288         145 PGETVVVSAAAGAVGSVVGQIAKLLGARVVGIAGSDEKCRWLVEEL---GF-D-AA--INYKTPDLAEALK-EAAP--DG  214 (329)
T ss_pred             CCCEEEEecCcchHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHhhc---CC-c-eE--EecCChhHHHHHH-Hhcc--CC
Confidence            5789999999999999999988889999999988776544332212   21 1 11  2333332222222 2211  47


Q ss_pred             ccEEEEccc
Q 044010          126 LDHLVNNAG  134 (248)
Q Consensus       126 id~vv~~ag  134 (248)
                      +|++++++|
T Consensus       215 ~d~vi~~~g  223 (329)
T cd05288         215 IDVYFDNVG  223 (329)
T ss_pred             ceEEEEcch
Confidence            999998876

Prostaglandins and related eicosanoids are metabolized by the oxidation of the 15(S)-hydroxyl group of the NAD+-dependent (type I 15-PGDH) 15-prostaglandin dehydrogenase (15-PGDH) followed by reduction by NADPH/NADH-dependent (type II 15-PGDH) delta-13 15-prostaglandin reductase (13-PGR) to 15-keto-13,14,-dihydroprostaglandins. 13-PGR is a bifunctional enzyme, since it also has leukotriene B(4) 12-hydroxydehydrogenase activity. These 15-PGDH and related enzymes are members of the medium chain dehydrogenase/reductase family. The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino

>PLN00112 malate dehydrogenase (NADP); Provisional

Probab=96.28  E-value=0.081  Score=48.15  Aligned_cols=111  Identities=18%  Similarity=0.132  Sum_probs=72.1

Q ss_pred             EEEEcCCCChHHHHHHHHHHHc-------CC--eEEEEeCCcchHHHHHHHHHhhC-C--CcEEEEEccCCCHHHHHHHH
Q 044010           49 VVIITGASSGIGEHLAYEYARR-------GA--CLALCARREKSLEEVADTAREIG-S--PDVITIRADVSKVDDCRSLV  116 (248)
Q Consensus        49 ~~lVtGg~~gIG~aia~~l~~~-------G~--~V~l~~r~~~~~~~~~~~l~~~~-~--~~v~~~~~D~~~~~~~~~~~  116 (248)
                      ++.|+|++|.+|.+++..|+..       |.  +++++++++++++.....+.... .  ..+.+ ..  .+.       
T Consensus       102 KV~IIGAaG~VG~~~A~~L~~~~v~g~~~~i~~eLvliD~~~~~a~G~amDL~daa~~~~~~v~i-~~--~~y-------  171 (444)
T PLN00112        102 NVAVSGAAGMISNHLLFKLASGEVFGPDQPIALKLLGSERSKQALEGVAMELEDSLYPLLREVSI-GI--DPY-------  171 (444)
T ss_pred             EEEEECCCcHHHHHHHHHHHhcccccCCCCcccEEEEEcCCcchhHHHHHHHHHhhhhhcCceEE-ec--CCH-------
Confidence            5899999999999999999988       65  79999999998887777776543 1  12211 11  122       


Q ss_pred             HHHHhHcCCccEEEEccccCCcccccccCChHHHHHHHHhhhHHHHHHHHHHhhhhhh---cCCeEEEEcC
Q 044010          117 EETMNHFGRLDHLVNNAGISSVALFEDIVNITDFKQIMNINFWGSVYTTRFAVPHLRY---TKGKIVVLSS  184 (248)
Q Consensus       117 ~~~~~~~g~id~vv~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~---~~g~iV~isS  184 (248)
                          +.+.+-|++|..||... ++  .    ++-.+.++.|..-.    +...+.+.+   ..+.+|++|.
T Consensus       172 ----e~~kdaDiVVitAG~pr-kp--G----~tR~dLl~~N~~I~----k~i~~~I~~~a~p~~ivIVVsN  227 (444)
T PLN00112        172 ----EVFQDAEWALLIGAKPR-GP--G----MERADLLDINGQIF----AEQGKALNEVASRNVKVIVVGN  227 (444)
T ss_pred             ----HHhCcCCEEEECCCCCC-CC--C----CCHHHHHHHHHHHH----HHHHHHHHHhcCCCeEEEEcCC
Confidence                33458999999999753 21  1    22344555565544    444444443   2366776663

>PTZ00117 malate dehydrogenase; Provisional

Probab=96.24  E-value=0.039  Score=48.19  Aligned_cols=115  Identities=14%  Similarity=0.158  Sum_probs=67.0

Q ss_pred             CCCCEEEEcCCCChHHHHHHHHHHHcC-CeEEEEeCCcchHHHHHHHHHhhC---CCcEEEEEccCCCHHHHHHHHHHHH
Q 044010           45 VSGKVVIITGASSGIGEHLAYEYARRG-ACLALCARREKSLEEVADTAREIG---SPDVITIRADVSKVDDCRSLVEETM  120 (248)
Q Consensus        45 ~~~k~~lVtGg~~gIG~aia~~l~~~G-~~V~l~~r~~~~~~~~~~~l~~~~---~~~v~~~~~D~~~~~~~~~~~~~~~  120 (248)
                      .+++++.|.|+ |.+|..++..++..| .++++.+++++.++.....+....   +.... +.. -+|.   + .     
T Consensus         3 ~~~~KI~IIGa-G~vG~~ia~~l~~~~~~~l~L~Di~~~~~~g~~lDl~~~~~~~~~~~~-i~~-~~d~---~-~-----   70 (319)
T PTZ00117          3 VKRKKISMIGA-GQIGSTVALLILQKNLGDVVLYDVIKGVPQGKALDLKHFSTLVGSNIN-ILG-TNNY---E-D-----   70 (319)
T ss_pred             CCCcEEEEECC-CHHHHHHHHHHHHCCCCeEEEEECCCccchhHHHHHhhhccccCCCeE-EEe-CCCH---H-H-----
Confidence            35678999997 889999999999988 699999998876543222222111   00111 111 1222   2 1     


Q ss_pred             hHcCCccEEEEccccCCcccccccCChHHHHHHHHhhhHHHHHHHHHHhhhhhhc--CCeEEEEcC
Q 044010          121 NHFGRLDHLVNNAGISSVALFEDIVNITDFKQIMNINFWGSVYTTRFAVPHLRYT--KGKIVVLSS  184 (248)
Q Consensus       121 ~~~g~id~vv~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~--~g~iV~isS  184 (248)
                        +.+-|++|.++|......    .+   -.+.+..|.    .+.+.+.+.+.+.  ++.++++|.
T Consensus        71 --l~~ADiVVitag~~~~~g----~~---r~dll~~n~----~i~~~i~~~i~~~~p~a~vivvsN  123 (319)
T PTZ00117         71 --IKDSDVVVITAGVQRKEE----MT---REDLLTING----KIMKSVAESVKKYCPNAFVICVTN  123 (319)
T ss_pred             --hCCCCEEEECCCCCCCCC----CC---HHHHHHHHH----HHHHHHHHHHHHHCCCeEEEEecC
Confidence              237899999998753221    12   234444555    3455555555432  356777764

>PRK01438 murD UDP-N-acetylmuramoyl-L-alanyl-D-glutamate synthetase; Provisional

Probab=96.23  E-value=0.037  Score=50.95  Aligned_cols=78  Identities=17%  Similarity=0.136  Sum_probs=53.0

Q ss_pred             CCCCCEEEEcCCCChHHHHHHHHHHHcCCeEEEEeCCcc-hHHHHHHHHHhhCCCcEEEEEccCCCHHHHHHHHHHHHhH
Q 044010           44 DVSGKVVIITGASSGIGEHLAYEYARRGACLALCARREK-SLEEVADTAREIGSPDVITIRADVSKVDDCRSLVEETMNH  122 (248)
Q Consensus        44 ~~~~k~~lVtGg~~gIG~aia~~l~~~G~~V~l~~r~~~-~~~~~~~~l~~~~~~~v~~~~~D~~~~~~~~~~~~~~~~~  122 (248)
                      ++++|+++|.|+ |++|.++|+.|.++|++|.+.+++.. ..+...+.+++.+   +.++..+-..             .
T Consensus        13 ~~~~~~v~viG~-G~~G~~~A~~L~~~G~~V~~~d~~~~~~~~~~~~~l~~~g---v~~~~~~~~~-------------~   75 (480)
T PRK01438         13 DWQGLRVVVAGL-GVSGFAAADALLELGARVTVVDDGDDERHRALAAILEALG---ATVRLGPGPT-------------L   75 (480)
T ss_pred             CcCCCEEEEECC-CHHHHHHHHHHHHCCCEEEEEeCCchhhhHHHHHHHHHcC---CEEEECCCcc-------------c
Confidence            567899999987 78999999999999999999986543 3333344555443   3333222111             0


Q ss_pred             cCCccEEEEccccCCc
Q 044010          123 FGRLDHLVNNAGISSV  138 (248)
Q Consensus       123 ~g~id~vv~~ag~~~~  138 (248)
                      ....|.+|...|+.+.
T Consensus        76 ~~~~D~Vv~s~Gi~~~   91 (480)
T PRK01438         76 PEDTDLVVTSPGWRPD   91 (480)
T ss_pred             cCCCCEEEECCCcCCC
Confidence            1258999999987653

>TIGR01759 MalateDH-SF1 malate dehydrogenase

Probab=96.22  E-value=0.096  Score=45.81  Aligned_cols=116  Identities=18%  Similarity=0.148  Sum_probs=67.1

Q ss_pred             EEEEcCCCChHHHHHHHHHHHcCC-------eEEEEeCCc--chHHHHHHHHHhhCCCcEEEEEccCCCHHHHHHHHHHH
Q 044010           49 VVIITGASSGIGEHLAYEYARRGA-------CLALCARRE--KSLEEVADTAREIGSPDVITIRADVSKVDDCRSLVEET  119 (248)
Q Consensus        49 ~~lVtGg~~gIG~aia~~l~~~G~-------~V~l~~r~~--~~~~~~~~~l~~~~~~~v~~~~~D~~~~~~~~~~~~~~  119 (248)
                      ++.|+|++|.+|.+++..|+.+|.       ++++.+.++  ++++.....+..........+  .++  .       .-
T Consensus         5 KV~IIGa~G~VG~~~a~~l~~~~~~~~~~~~el~L~Di~~~~~~a~g~a~Dl~~~~~~~~~~~--~i~--~-------~~   73 (323)
T TIGR01759         5 RVAVTGAAGQIGYSLLFRIASGELFGKDQPVVLHLLDIPPAMKALEGVAMELEDCAFPLLAGV--VAT--T-------DP   73 (323)
T ss_pred             EEEEECCCcHHHHHHHHHHHhCCcccCCCccEEEEEecCCcccccchHHHHHhhccccccCCc--EEe--c-------Ch
Confidence            578999999999999999998874       799999965  334544444443221000000  011  0       11


Q ss_pred             HhHcCCccEEEEccccCCcccccccCChHHHHHHHHhhhHHHHHHHHHHhhhhhhcCCeEEEEc
Q 044010          120 MNHFGRLDHLVNNAGISSVALFEDIVNITDFKQIMNINFWGSVYTTRFAVPHLRYTKGKIVVLS  183 (248)
Q Consensus       120 ~~~~g~id~vv~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~g~iV~is  183 (248)
                      .+.+.+-|++|.+||.....   .    ++-.+.+..|..-.-.+.+.+.++-. +++.++++|
T Consensus        74 ~~~~~daDvVVitAG~~~k~---g----~tR~dll~~Na~i~~~i~~~i~~~~~-~~~iiivvs  129 (323)
T TIGR01759        74 EEAFKDVDAALLVGAFPRKP---G----MERADLLSKNGKIFKEQGKALNKVAK-KDVKVLVVG  129 (323)
T ss_pred             HHHhCCCCEEEEeCCCCCCC---C----CcHHHHHHHHHHHHHHHHHHHHhhCC-CCeEEEEeC
Confidence            23334799999999975321   1    22345566666655445544443321 245666665

This model represents a family of malate dehydrogenases in bacteria and eukaryotes which utilize either NAD or NADP depending on the species and context. MDH interconverts malate and oxaloacetate and is a part of the citric acid cycle as well as the C4 cycle in certain photosynthetic organisms.

>PRK06718 precorrin-2 dehydrogenase; Reviewed

Probab=96.21  E-value=0.042  Score=44.72  Aligned_cols=38  Identities=24%  Similarity=0.318  Sum_probs=34.7

Q ss_pred             cCCCCCEEEEcCCCChHHHHHHHHHHHcCCeEEEEeCCc
Q 044010           43 EDVSGKVVIITGASSGIGEHLAYEYARRGACLALCARRE   81 (248)
Q Consensus        43 ~~~~~k~~lVtGg~~gIG~aia~~l~~~G~~V~l~~r~~   81 (248)
                      .+++||.++|.|| |.+|...++.|++.|++|.+++++.
T Consensus         6 l~l~~k~vLVIGg-G~va~~ka~~Ll~~ga~V~VIs~~~   43 (202)
T PRK06718          6 IDLSNKRVVIVGG-GKVAGRRAITLLKYGAHIVVISPEL   43 (202)
T ss_pred             EEcCCCEEEEECC-CHHHHHHHHHHHHCCCeEEEEcCCC
Confidence            4799999999998 8999999999999999999998754

>PRK09496 trkA potassium transporter peripheral membrane component; Reviewed

Probab=96.20  E-value=0.021  Score=52.06  Aligned_cols=78  Identities=21%  Similarity=0.243  Sum_probs=57.6

Q ss_pred             CCCCCEEEEcCCCChHHHHHHHHHHHcCCeEEEEeCCcchHHHHHHHHHhhCCCcEEEEEccCCCHHHHHHHHHHHHhHc
Q 044010           44 DVSGKVVIITGASSGIGEHLAYEYARRGACLALCARREKSLEEVADTAREIGSPDVITIRADVSKVDDCRSLVEETMNHF  123 (248)
Q Consensus        44 ~~~~k~~lVtGg~~gIG~aia~~l~~~G~~V~l~~r~~~~~~~~~~~l~~~~~~~v~~~~~D~~~~~~~~~~~~~~~~~~  123 (248)
                      ....++++|.|+ |.+|+.+++.|.++|++|++++++++..+...+    .+. .+.++..|.++.+.++++-      .
T Consensus       228 ~~~~~~iiIiG~-G~~g~~l~~~L~~~~~~v~vid~~~~~~~~~~~----~~~-~~~~i~gd~~~~~~L~~~~------~  295 (453)
T PRK09496        228 EKPVKRVMIVGG-GNIGYYLAKLLEKEGYSVKLIERDPERAEELAE----ELP-NTLVLHGDGTDQELLEEEG------I  295 (453)
T ss_pred             CCCCCEEEEECC-CHHHHHHHHHHHhCCCeEEEEECCHHHHHHHHH----HCC-CCeEEECCCCCHHHHHhcC------C
Confidence            356789999988 999999999999999999999998865554433    222 4567888999887665442      2


Q ss_pred             CCccEEEEcc
Q 044010          124 GRLDHLVNNA  133 (248)
Q Consensus       124 g~id~vv~~a  133 (248)
                      .+.|.+|...
T Consensus       296 ~~a~~vi~~~  305 (453)
T PRK09496        296 DEADAFIALT  305 (453)
T ss_pred             ccCCEEEECC
Confidence            3677776543

>cd01492 Aos1_SUMO Ubiquitin activating enzyme (E1) subunit Aos1

Probab=96.19  E-value=0.041  Score=44.55  Aligned_cols=37  Identities=19%  Similarity=0.434  Sum_probs=32.3

Q ss_pred             cCCCCCEEEEcCCCChHHHHHHHHHHHcCC-eEEEEeCC
Q 044010           43 EDVSGKVVIITGASSGIGEHLAYEYARRGA-CLALCARR   80 (248)
Q Consensus        43 ~~~~~k~~lVtGg~~gIG~aia~~l~~~G~-~V~l~~r~   80 (248)
                      ..+++++++|.|+ ||+|.++++.|+..|. ++.++|.+
T Consensus        17 ~~L~~s~VlIiG~-gglG~evak~La~~GVg~i~lvD~d   54 (197)
T cd01492          17 KRLRSARILLIGL-KGLGAEIAKNLVLSGIGSLTILDDR   54 (197)
T ss_pred             HHHHhCcEEEEcC-CHHHHHHHHHHHHcCCCEEEEEECC
Confidence            4788999999975 6799999999999998 78888765

Aos1 is part of the heterodimeric activating enzyme (E1), specific for the SUMO family of ubiquitin-like proteins (Ubls). E1 enzymes are part of a conjugation cascade to attach Ub or Ubls, covalently to substrate proteins consisting of activating (E1), conjugating (E2), and/or ligating (E3) enzymes. E1 activates ubiquitin by C-terminal adenylation, and subsequently forms a highly reactive thioester bond between its catalytic cysteine and Ubls C-terminus. The E1 also associates with E2 and promotes ubiquitin transfer to the E2's catalytic cysteine. Post-translational modification by SUMO family of ubiquitin-like proteins (Ublps) is involved in cell division, nuclear transport, the stress response and signal transduction. Aos1 contains part of the adenylation domain.

>cd08268 MDR2 Medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family

Probab=96.19  E-value=0.024  Score=48.44  Aligned_cols=80  Identities=21%  Similarity=0.204  Sum_probs=51.5

Q ss_pred             CCCEEEEcCCCChHHHHHHHHHHHcCCeEEEEeCCcchHHHHHHHHHhhCCCcEEEEEccCCCHHHHHHHHHHHHhHcCC
Q 044010           46 SGKVVIITGASSGIGEHLAYEYARRGACLALCARREKSLEEVADTAREIGSPDVITIRADVSKVDDCRSLVEETMNHFGR  125 (248)
Q Consensus        46 ~~k~~lVtGg~~gIG~aia~~l~~~G~~V~l~~r~~~~~~~~~~~l~~~~~~~v~~~~~D~~~~~~~~~~~~~~~~~~g~  125 (248)
                      ++++++|+|+++++|.++++.+...|+++++++++.++.+..    .+.+. . .++  |.... +..+.+.+... ...
T Consensus       144 ~~~~vli~g~~~~~g~~~~~~~~~~g~~v~~~~~~~~~~~~~----~~~g~-~-~~~--~~~~~-~~~~~~~~~~~-~~~  213 (328)
T cd08268         144 PGDSVLITAASSSVGLAAIQIANAAGATVIATTRTSEKRDAL----LALGA-A-HVI--VTDEE-DLVAEVLRITG-GKG  213 (328)
T ss_pred             CCCEEEEecCccHHHHHHHHHHHHcCCEEEEEcCCHHHHHHH----HHcCC-C-EEE--ecCCc-cHHHHHHHHhC-CCC
Confidence            578999999999999999999999999999998887654433    22221 1 122  22222 22222222211 125


Q ss_pred             ccEEEEcccc
Q 044010          126 LDHLVNNAGI  135 (248)
Q Consensus       126 id~vv~~ag~  135 (248)
                      +|.+++++|.
T Consensus       214 ~d~vi~~~~~  223 (328)
T cd08268         214 VDVVFDPVGG  223 (328)
T ss_pred             ceEEEECCch
Confidence            9999998774

This group is a member of the medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, but lacks the zinc-binding sites of the zinc-dependent alcohol dehydrogenases. The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P)-binding Rossmann fold domain of a beta-alpha form and an N-terminal catalytic domain with distant homology to GroES. The MDR group contains a host of activities, including the founding alcoh

>cd01485 E1-1_like Ubiquitin activating enzyme (E1), repeat 1-like

Probab=96.16  E-value=0.058  Score=43.72  Aligned_cols=38  Identities=21%  Similarity=0.406  Sum_probs=32.3

Q ss_pred             cCCCCCEEEEcCCCChHHHHHHHHHHHcCC-eEEEEeCCc
Q 044010           43 EDVSGKVVIITGASSGIGEHLAYEYARRGA-CLALCARRE   81 (248)
Q Consensus        43 ~~~~~k~~lVtGg~~gIG~aia~~l~~~G~-~V~l~~r~~   81 (248)
                      ..+++.+++|.|+ ||+|.++++.|+..|. ++.++|.+.
T Consensus        15 ~~L~~s~VlviG~-gglGsevak~L~~~GVg~i~lvD~d~   53 (198)
T cd01485          15 NKLRSAKVLIIGA-GALGAEIAKNLVLAGIDSITIVDHRL   53 (198)
T ss_pred             HHHhhCcEEEECC-CHHHHHHHHHHHHcCCCEEEEEECCc
Confidence            3678889999977 5699999999999998 798888763

E1, a highly conserved small protein present universally in eukaryotic cells, is part of cascade to attach ubiquitin (Ub) covalently to substrate proteins. This cascade consists of activating (E1), conjugating (E2), and/or ligating (E3) enzymes and then targets them for degradation by the 26S proteasome. E1 activates ubiquitin by C-terminal adenylation, and subsequently forms a highly reactive thioester bond between its catalytic cysteine and ubiquitin's C-terminus. The E1 also associates with E2 and promotes ubiquitin transfer to the E2's catalytic cysteine. A set of novel molecules with a structural similarity to Ub, called Ub-like proteins (Ubls), have similar conjugation cascades. In contrast to ubiquitin-E1, which is a single-chain protein with a weakly conserved two-fold repeat, many of the Ubls-E1are a heterodimer where each subunit corresponds to one half of a single-chain E1. This CD represents the family homol

>cd05293 LDH_1 A subgroup of L-lactate dehydrogenases

Probab=96.14  E-value=0.13  Score=44.69  Aligned_cols=113  Identities=15%  Similarity=0.101  Sum_probs=69.5

Q ss_pred             CCEEEEcCCCChHHHHHHHHHHHcCC--eEEEEeCCcchHHHHHHHHHhhCC--CcEEEEEccCCCHHHHHHHHHHHHhH
Q 044010           47 GKVVIITGASSGIGEHLAYEYARRGA--CLALCARREKSLEEVADTAREIGS--PDVITIRADVSKVDDCRSLVEETMNH  122 (248)
Q Consensus        47 ~k~~lVtGg~~gIG~aia~~l~~~G~--~V~l~~r~~~~~~~~~~~l~~~~~--~~v~~~~~D~~~~~~~~~~~~~~~~~  122 (248)
                      ..++.|+|+ |.+|.++|..|+..|-  ++++.+.+.+.++.....+.....  ....+...  +|.+           +
T Consensus         3 ~~Ki~IiGa-G~VG~~~a~~l~~~~~~~el~LiD~~~~~~~g~a~Dl~~~~~~~~~~~v~~~--~dy~-----------~   68 (312)
T cd05293           3 RNKVTVVGV-GQVGMACAISILAKGLADELVLVDVVEDKLKGEAMDLQHGSAFLKNPKIEAD--KDYS-----------V   68 (312)
T ss_pred             CCEEEEECC-CHHHHHHHHHHHhcCCCCEEEEEeCCccHHHHHHHHHHHhhccCCCCEEEEC--CCHH-----------H
Confidence            347888996 9999999999998875  799999998877766666665431  11122211  1221           2


Q ss_pred             cCCccEEEEccccCCcccccccCChHHHHHHHHhhhHHHHHHHHHHhhhhhh--cCCeEEEEcC
Q 044010          123 FGRLDHLVNNAGISSVALFEDIVNITDFKQIMNINFWGSVYTTRFAVPHLRY--TKGKIVVLSS  184 (248)
Q Consensus       123 ~g~id~vv~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~--~~g~iV~isS  184 (248)
                      +.+.|++|.+||.....   . .+.   .+.+..|..-    ++.+.+.+.+  .++.++++|.
T Consensus        69 ~~~adivvitaG~~~k~---g-~~R---~dll~~N~~i----~~~~~~~i~~~~p~~~vivvsN  121 (312)
T cd05293          69 TANSKVVIVTAGARQNE---G-ESR---LDLVQRNVDI----FKGIIPKLVKYSPNAILLVVSN  121 (312)
T ss_pred             hCCCCEEEECCCCCCCC---C-CCH---HHHHHHHHHH----HHHHHHHHHHhCCCcEEEEccC
Confidence            24799999999975431   1 122   3344445444    4444444432  2477777774

L-lactate dehydrogenases (LDH) are tetrameric enzymes catalyzing the last step of glycolysis in which pyruvate is converted to L-lactate. This subgroup is composed of eukaryotic LDHs. Vertebrate LDHs are non-allosteric. This is in contrast to some bacterial LDHs that are activated by an allosteric effector such as fructose-1,6-bisphosphate. LDHs are part of the NAD(P)-binding Rossmann fold superfamily, which includes a wide variety of protein families including the NAD(P)-binding domains of alcohol dehydrogenases, tyrosine-dependent oxidoreductases, glyceraldehyde-3-phosphate dehydrogenases, formate/glycerate dehydrogenases, siroheme synthases, 6-phosphogluconate dehydrogenases, aminoacid dehydrogenases, repressor rex, and NAD-binding potassium channel domains, among others.

>PRK05442 malate dehydrogenase; Provisional

Probab=96.10  E-value=0.032  Score=48.81  Aligned_cols=112  Identities=19%  Similarity=0.149  Sum_probs=65.6

Q ss_pred             CEEEEcCCCChHHHHHHHHHHHcCC-------eEEEEeCCcc--hHHHHHHHHHhhC-C--CcEEEEEccCCCHHHHHHH
Q 044010           48 KVVIITGASSGIGEHLAYEYARRGA-------CLALCARREK--SLEEVADTAREIG-S--PDVITIRADVSKVDDCRSL  115 (248)
Q Consensus        48 k~~lVtGg~~gIG~aia~~l~~~G~-------~V~l~~r~~~--~~~~~~~~l~~~~-~--~~v~~~~~D~~~~~~~~~~  115 (248)
                      +++.|+|++|.+|..++..|+..|.       ++++.+.++.  +++.....+.... .  ..+.+     +        
T Consensus         5 ~KV~IiGaaG~VG~~~a~~l~~~~~~~~~~~~el~LiDi~~~~~~~~g~a~Dl~~~~~~~~~~~~i-----~--------   71 (326)
T PRK05442          5 VRVAVTGAAGQIGYSLLFRIASGDMLGKDQPVILQLLEIPPALKALEGVVMELDDCAFPLLAGVVI-----T--------   71 (326)
T ss_pred             cEEEEECCCcHHHHHHHHHHHhhhhcCCCCccEEEEEecCCcccccceeehhhhhhhhhhcCCcEE-----e--------
Confidence            4788999999999999999998764       6999998543  2333333333221 0  01111     1        


Q ss_pred             HHHHHhHcCCccEEEEccccCCcccccccCChHHHHHHHHhhhHHHHHHHHHHhhhhhh---cCCeEEEEcC
Q 044010          116 VEETMNHFGRLDHLVNNAGISSVALFEDIVNITDFKQIMNINFWGSVYTTRFAVPHLRY---TKGKIVVLSS  184 (248)
Q Consensus       116 ~~~~~~~~g~id~vv~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~---~~g~iV~isS  184 (248)
                       ....+++.+-|++|.+||.....   .    ++-.+.+..|..-    ++.+.+.+.+   .++.++++|.
T Consensus        72 -~~~y~~~~daDiVVitaG~~~k~---g----~tR~dll~~Na~i----~~~i~~~i~~~~~~~~iiivvsN  131 (326)
T PRK05442         72 -DDPNVAFKDADVALLVGARPRGP---G----MERKDLLEANGAI----FTAQGKALNEVAARDVKVLVVGN  131 (326)
T ss_pred             -cChHHHhCCCCEEEEeCCCCCCC---C----CcHHHHHHHHHHH----HHHHHHHHHHhCCCCeEEEEeCC
Confidence             01123445899999999975321   1    2234445555544    4555555544   2466666663

>PF12242 Eno-Rase_NADH_b: NAD(P)H binding domain of trans-2-enoyl-CoA reductase; PDB: 3ZU5_A 3ZU3_A 3ZU4_A 3ZU2_A 3S8M_A

Probab=96.03  E-value=0.01  Score=40.00  Aligned_cols=39  Identities=28%  Similarity=0.310  Sum_probs=22.8

Q ss_pred             cCCCC-CEEEEcCCCChHHHHHHHHHH-HcCCeEEEEeCCc
Q 044010           43 EDVSG-KVVIITGASSGIGEHLAYEYA-RRGACLALCARRE   81 (248)
Q Consensus        43 ~~~~~-k~~lVtGg~~gIG~aia~~l~-~~G~~V~l~~r~~   81 (248)
                      .+++| |++||+|+|+|.|++-.-.++ ..|++.+-++...
T Consensus        34 ~~~~GpK~VLViGaStGyGLAsRIa~aFg~gA~TiGV~fEk   74 (78)
T PF12242_consen   34 GKINGPKKVLVIGASTGYGLASRIAAAFGAGADTIGVSFEK   74 (78)
T ss_dssp             ---TS-SEEEEES-SSHHHHHHHHHHHHCC--EEEEEE---
T ss_pred             CCCCCCceEEEEecCCcccHHHHHHHHhcCCCCEEEEeecc
Confidence            34566 899999999999999444444 5577777766543

>cd01489 Uba2_SUMO Ubiquitin activating enzyme (E1) subunit UBA2

Probab=96.03  E-value=0.058  Score=46.86  Aligned_cols=31  Identities=26%  Similarity=0.374  Sum_probs=26.8

Q ss_pred             EEEcCCCChHHHHHHHHHHHcCC-eEEEEeCCc
Q 044010           50 VIITGASSGIGEHLAYEYARRGA-CLALCARRE   81 (248)
Q Consensus        50 ~lVtGg~~gIG~aia~~l~~~G~-~V~l~~r~~   81 (248)
                      ++|.|+ ||+|.++++.|+..|. ++.++|.+.
T Consensus         2 VlIVGa-GGlG~EiaKnLal~Gvg~ItIvD~D~   33 (312)
T cd01489           2 VLVVGA-GGIGCELLKNLVLTGFGEIHIIDLDT   33 (312)
T ss_pred             EEEECC-CHHHHHHHHHHHHhcCCeEEEEcCCC
Confidence            677775 9999999999999998 899988754

UBA2 is part of the heterodimeric activating enzyme (E1), specific for the SUMO family of ubiquitin-like proteins (Ubls). E1 enzymes are part of a conjugation cascade to attach Ub or Ubls, covalently to substrate proteins consisting of activating (E1), conjugating (E2), and/or ligating (E3) enzymes. E1 activates ubiquitin by C-terminal adenylation, and subsequently forms a highly reactive thioester bond between its catalytic cysteine and Ubls C-terminus. The E1 also associates with E2 and promotes ubiquitin transfer to the E2's catalytic cysteine. Post-translational modification by SUMO family of ubiquitin-like proteins (Ublps) is involved in cell division, nuclear transport, the stress response and signal transduction. UBA2 contains both the nucleotide-binding motif involved in adenylation and the catalytic cysteine involved in the thioester intermediate and Ublp transfer to E2.

>cd08244 MDR_enoyl_red Possible enoyl reductase

Probab=95.99  E-value=0.032  Score=48.00  Aligned_cols=79  Identities=25%  Similarity=0.352  Sum_probs=51.6

Q ss_pred             CCCEEEEcCCCChHHHHHHHHHHHcCCeEEEEeCCcchHHHHHHHHHhhCCCcEEEEEccCCCHHHHHHHHHHHHhHcCC
Q 044010           46 SGKVVIITGASSGIGEHLAYEYARRGACLALCARREKSLEEVADTAREIGSPDVITIRADVSKVDDCRSLVEETMNHFGR  125 (248)
Q Consensus        46 ~~k~~lVtGg~~gIG~aia~~l~~~G~~V~l~~r~~~~~~~~~~~l~~~~~~~v~~~~~D~~~~~~~~~~~~~~~~~~g~  125 (248)
                      .+.+++|+|+++++|.++++.+...|++|+.++++.++.+..    ++.+. .   ...|..+.+..+.+.+.. . ...
T Consensus       142 ~~~~vlI~g~~~~~g~~~~~la~~~g~~v~~~~~~~~~~~~~----~~~g~-~---~~~~~~~~~~~~~~~~~~-~-~~~  211 (324)
T cd08244         142 PGDVVLVTAAAGGLGSLLVQLAKAAGATVVGAAGGPAKTALV----RALGA-D---VAVDYTRPDWPDQVREAL-G-GGG  211 (324)
T ss_pred             CCCEEEEEcCCchHHHHHHHHHHHCCCEEEEEeCCHHHHHHH----HHcCC-C---EEEecCCccHHHHHHHHc-C-CCC
Confidence            478999999999999999888888999999998887654433    22222 1   122433433333322211 1 125


Q ss_pred             ccEEEEccc
Q 044010          126 LDHLVNNAG  134 (248)
Q Consensus       126 id~vv~~ag  134 (248)
                      +|+++++.|
T Consensus       212 ~d~vl~~~g  220 (324)
T cd08244         212 VTVVLDGVG  220 (324)
T ss_pred             ceEEEECCC
Confidence            999999876

Member identified as possible enoyl reductase of the MDR family. 2-enoyl thioester reductase (ETR) catalyzes the NADPH-dependent dependent conversion of trans-2-enoyl acyl carrier protein/coenzyme A (ACP/CoA) to acyl-(ACP/CoA) in fatty acid synthesis. 2-enoyl thioester reductase activity has been linked in Candida tropicalis as essential in maintaining mitiochondrial respiratory function. This ETR family is a part of the medium chain dehydrogenase/reductase family, but lack the zinc coordination sites characteristic of the alcohol dehydrogenases in this family. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde and NADH, while in yeast and some other microorganisms ADH catalyzes the conversion acetaldehyde to ethanol in alcoholic fermentation. ADH is a member of the medium chain alcohol dehydr

>cd01484 E1-2_like Ubiquitin activating enzyme (E1), repeat 2-like

Probab=95.93  E-value=0.084  Score=43.97  Aligned_cols=31  Identities=26%  Similarity=0.367  Sum_probs=26.6

Q ss_pred             EEEcCCCChHHHHHHHHHHHcCC-eEEEEeCCc
Q 044010           50 VIITGASSGIGEHLAYEYARRGA-CLALCARRE   81 (248)
Q Consensus        50 ~lVtGg~~gIG~aia~~l~~~G~-~V~l~~r~~   81 (248)
                      ++|.| .||+|.++++.|+..|. ++.++|.+.
T Consensus         2 VlvvG-~GGlG~eilk~La~~Gvg~i~ivD~D~   33 (234)
T cd01484           2 VLLVG-AGGIGCELLKNLALMGFGQIHVIDMDT   33 (234)
T ss_pred             EEEEC-CCHHHHHHHHHHHHcCCCeEEEEeCCE
Confidence            56666 58999999999999998 899988864

E1, a highly conserved small protein present universally in eukaryotic cells, is part of cascade to attach ubiquitin (Ub) covalently to substrate proteins. This cascade consists of activating (E1), conjugating (E2), and/or ligating (E3) enzymes and then targets them for degradation by the 26S proteasome. E1 activates ubiquitin by C-terminal adenylation, and subsequently forms a highly reactive thioester bond between its catalytic cysteine and ubiquitin's C-terminus. E1 also associates with E2 and promotes ubiquitin transfer to the E2's catalytic cysteine. A set of novel molecules with a structural similarity to Ub, called Ub-like proteins (Ubls), have similar conjugation cascades. In contrast to ubiquitin-E1, which is a single-chain protein with a weakly conserved two-fold repeat, many of the Ubls-E1are a heterodimer where each subunit corresponds to one half of a single-chain E1. This CD represents the family homologou

>KOG1197 consensus Predicted quinone oxidoreductase [Energy production and conversion; General function prediction only]

Probab=95.90  E-value=0.63  Score=39.19  Aligned_cols=145  Identities=21%  Similarity=0.256  Sum_probs=86.2

Q ss_pred             CCCCEEEEcCCCChHHHHHHHHHHHcCCeEEEEeCCcchHHHHHHHHHhhCCCcEEEEEccCCCHHHHHHHHHHHHhHcC
Q 044010           45 VSGKVVIITGASSGIGEHLAYEYARRGACLALCARREKSLEEVADTAREIGSPDVITIRADVSKVDDCRSLVEETMNHFG  124 (248)
Q Consensus        45 ~~~k~~lVtGg~~gIG~aia~~l~~~G~~V~l~~r~~~~~~~~~~~l~~~~~~~v~~~~~D~~~~~~~~~~~~~~~~~~g  124 (248)
                      -.|.++||--+.||.|..+++.+-..|++++.+..+.++.+.+.+     ++  + -+..|.+.++-+++..+-.  .-.
T Consensus       145 kpGhtVlvhaAAGGVGlll~Ql~ra~~a~tI~~asTaeK~~~ake-----nG--~-~h~I~y~~eD~v~~V~kiT--ngK  214 (336)
T KOG1197|consen  145 KPGHTVLVHAAAGGVGLLLCQLLRAVGAHTIATASTAEKHEIAKE-----NG--A-EHPIDYSTEDYVDEVKKIT--NGK  214 (336)
T ss_pred             CCCCEEEEEeccccHHHHHHHHHHhcCcEEEEEeccHHHHHHHHh-----cC--C-cceeeccchhHHHHHHhcc--CCC
Confidence            358899999999999999999999999999998887766554433     11  1 2345665554443333211  123


Q ss_pred             CccEEEEccccCCcccccccCChHHHHHHHHhhhHHHHHHHHHHhhhhhhcCCeEEEEcCcccccc--------------
Q 044010          125 RLDHLVNNAGISSVALFEDIVNITDFKQIMNINFWGSVYTTRFAVPHLRYTKGKIVVLSSAASWLT--------------  190 (248)
Q Consensus       125 ~id~vv~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~g~iV~isS~~~~~~--------------  190 (248)
                      .+|+++-..|.-            .+...++               .+ +.+|.+|..+-..+..+              
T Consensus       215 GVd~vyDsvG~d------------t~~~sl~---------------~L-k~~G~mVSfG~asgl~~p~~l~~ls~k~l~l  266 (336)
T KOG1197|consen  215 GVDAVYDSVGKD------------TFAKSLA---------------AL-KPMGKMVSFGNASGLIDPIPLNQLSPKALQL  266 (336)
T ss_pred             Cceeeeccccch------------hhHHHHH---------------Hh-ccCceEEEeccccCCCCCeehhhcChhhhhh
Confidence            688887776642            1122111               12 46678887765554332              


Q ss_pred             -CCCCccchHHHHHHHHHHHHHHHHhCC---CeEEEEEecC
Q 044010          191 -APRMSFYNASKAALVLFFETLRVELGS---DVGVTIVTPG  227 (248)
Q Consensus       191 -~~~~~~Y~~sKaal~~l~~~la~~~~~---~i~v~~v~pg  227 (248)
                       .|.+..|-....-+...+--+=.....   +++++.+.|-
T Consensus       267 vrpsl~gYi~g~~el~~~v~rl~alvnsg~lk~~I~~~ypl  307 (336)
T KOG1197|consen  267 VRPSLLGYIDGEVELVSYVARLFALVNSGHLKIHIDHVYPL  307 (336)
T ss_pred             ccHhhhcccCCHHHHHHHHHHHHHHhhcCccceeeeeecch
Confidence             133445666555555543333223322   4888888774

>PRK14851 hypothetical protein; Provisional

Probab=95.88  E-value=0.066  Score=51.42  Aligned_cols=82  Identities=17%  Similarity=0.310  Sum_probs=55.0

Q ss_pred             cCCCCCEEEEcCCCChHHHHHHHHHHHcCC-eEEEEeCCcc-------------------hHHHHHHHHHhhCC-CcEEE
Q 044010           43 EDVSGKVVIITGASSGIGEHLAYEYARRGA-CLALCARREK-------------------SLEEVADTAREIGS-PDVIT  101 (248)
Q Consensus        43 ~~~~~k~~lVtGg~~gIG~aia~~l~~~G~-~V~l~~r~~~-------------------~~~~~~~~l~~~~~-~~v~~  101 (248)
                      ..+++++++|.|. ||+|..+++.|+..|. ++.++|.+.-                   |.+.+.+.+.+.++ .+++.
T Consensus        39 ~kL~~~~VlIvG~-GGlGs~va~~Lar~GVG~l~LvD~D~ve~sNLNRQ~~~~~~dvG~~Kv~v~~~~l~~inP~~~I~~  117 (679)
T PRK14851         39 ERLAEAKVAIPGM-GGVGGVHLITMVRTGIGRFHIADFDQFEPVNVNRQFGARVPSFGRPKLAVMKEQALSINPFLEITP  117 (679)
T ss_pred             HHHhcCeEEEECc-CHHHHHHHHHHHHhCCCeEEEEcCCEecccccccCcCcChhhCCCHHHHHHHHHHHHhCCCCeEEE
Confidence            4788999999985 8999999999999998 8888887431                   44444555555443 34555


Q ss_pred             EEccCCCHHHHHHHHHHHHhHcCCccEEEEcc
Q 044010          102 IRADVSKVDDCRSLVEETMNHFGRLDHLVNNA  133 (248)
Q Consensus       102 ~~~D~~~~~~~~~~~~~~~~~~g~id~vv~~a  133 (248)
                      +...++ .+.+.++++       ++|+||.+.
T Consensus       118 ~~~~i~-~~n~~~~l~-------~~DvVid~~  141 (679)
T PRK14851        118 FPAGIN-ADNMDAFLD-------GVDVVLDGL  141 (679)
T ss_pred             EecCCC-hHHHHHHHh-------CCCEEEECC
Confidence            555554 333444433       467766554

>cd05212 NAD_bind_m-THF_DH_Cyclohyd_like NAD(P) binding domain of methylene-tetrahydrofolate dehydrogenase and methylene-tetrahydrofolate dehydrogenase/cyclohydrolase

Probab=95.86  E-value=0.032  Score=42.66  Aligned_cols=41  Identities=27%  Similarity=0.419  Sum_probs=37.1

Q ss_pred             ccCCCCCEEEEcCCCChHHHHHHHHHHHcCCeEEEEeCCcc
Q 044010           42 SEDVSGKVVIITGASSGIGEHLAYEYARRGACLALCARREK   82 (248)
Q Consensus        42 ~~~~~~k~~lVtGg~~gIG~aia~~l~~~G~~V~l~~r~~~   82 (248)
                      .-+++||.++|.|-+.-.|..++..|.++|++|.++.++..
T Consensus        23 ~~~~~gk~v~VvGrs~~vG~pla~lL~~~gatV~~~~~~t~   63 (140)
T cd05212          23 GVRLDGKKVLVVGRSGIVGAPLQCLLQRDGATVYSCDWKTI   63 (140)
T ss_pred             CCCCCCCEEEEECCCchHHHHHHHHHHHCCCEEEEeCCCCc
Confidence            34899999999999999999999999999999999987543

NAD(P) binding domains of methylene-tetrahydrofolate dehydrogenase (m-THF DH) and m-THF DH/cyclohydrolase bifunctional enzymes (m-THF DH/cyclohydrolase). M-THF is a versatile carrier of activated one-carbon units. The major one-carbon folate donors are N-5 methyltetrahydrofolate, N5,N10-m-THF, and N10-formayltetrahydrofolate. The oxidation of metabolic intermediate m-THF to m-THF requires the enzyme m-THF DH. In addition, most DHs also have an associated cyclohydrolase activity which catalyzes its hydrolysis to N10-formyltetrahydrofolate. m-THF DH is typically found as part of a multifunctional protein in eukaryotes. NADP-dependent m-THF DH in mammals, birds and yeast are components of a trifunctional enzyme with DH, cyclohydrolase, and synthetase activities. Certain eukaryotic cells also contain homodimeric bifunctional

>cd08290 ETR 2-enoyl thioester reductase (ETR)

Probab=95.83  E-value=0.07  Score=46.37  Aligned_cols=83  Identities=22%  Similarity=0.292  Sum_probs=51.6

Q ss_pred             CCCEEEEcCCCChHHHHHHHHHHHcCCeEEEEeCCcchHHHHHHHHHhhCCCcEEEEEccCCCH--HHHHHHHHHHHhHc
Q 044010           46 SGKVVIITGASSGIGEHLAYEYARRGACLALCARREKSLEEVADTAREIGSPDVITIRADVSKV--DDCRSLVEETMNHF  123 (248)
Q Consensus        46 ~~k~~lVtGg~~gIG~aia~~l~~~G~~V~l~~r~~~~~~~~~~~l~~~~~~~v~~~~~D~~~~--~~~~~~~~~~~~~~  123 (248)
                      +|++++|.|+++++|.++++.+...|++++++.++.+..++..+.+++.+...  ++  +..+.  .+..+.+.....  
T Consensus       146 ~g~~vlI~g~~g~vg~~~~~~a~~~g~~v~~~~~~~~~~~~~~~~~~~~g~~~--~~--~~~~~~~~~~~~~i~~~~~--  219 (341)
T cd08290         146 PGDWVIQNGANSAVGQAVIQLAKLLGIKTINVVRDRPDLEELKERLKALGADH--VL--TEEELRSLLATELLKSAPG--  219 (341)
T ss_pred             CCCEEEEccchhHHHHHHHHHHHHcCCeEEEEEcCCCcchhHHHHHHhcCCCE--EE--eCcccccccHHHHHHHHcC--
Confidence            58899999999999999998888899998888886643333334444333222  12  11111  122222322211  


Q ss_pred             CCccEEEEccc
Q 044010          124 GRLDHLVNNAG  134 (248)
Q Consensus       124 g~id~vv~~ag  134 (248)
                      +.+|.++.+.|
T Consensus       220 ~~~d~vld~~g  230 (341)
T cd08290         220 GRPKLALNCVG  230 (341)
T ss_pred             CCceEEEECcC
Confidence            16999998877

2-enoyl thioester reductase (ETR) catalyzes the NADPH-dependent conversion of trans-2-enoyl acyl carrier protein/coenzyme A (ACP/CoA) to acyl-(ACP/CoA) in fatty acid synthesis. 2-enoyl thioester reductase activity has been linked in Candida tropicalis as essential in maintaining mitiochondrial respiratory function. This ETR family is a part of the medium chain dehydrogenase/reductase family, but lack the zinc coordination sites characteristic of the alcohol dehydrogenases in this family. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde and NADH, while in yeast and some other microorganisms ADH catalyzes the conversion acetaldehyde to ethanol in alcoholic fermentation. ADH is a member of the medium chain alcohol dehydrogenase family (MDR), which has a NAD(P)(H)-binding domain in a Rossmann f

>cd01337 MDH_glyoxysomal_mitochondrial Glyoxysomal and mitochondrial malate dehydrogenases

Probab=95.83  E-value=0.094  Score=45.57  Aligned_cols=117  Identities=20%  Similarity=0.156  Sum_probs=69.4

Q ss_pred             EEEEcCCCChHHHHHHHHHHHcCC--eEEEEeCCcchHHHHHHHHHhhCCCcEEEEEccCCCHHHHHHHHHHHHhHcCCc
Q 044010           49 VVIITGASSGIGEHLAYEYARRGA--CLALCARREKSLEEVADTAREIGSPDVITIRADVSKVDDCRSLVEETMNHFGRL  126 (248)
Q Consensus        49 ~~lVtGg~~gIG~aia~~l~~~G~--~V~l~~r~~~~~~~~~~~l~~~~~~~v~~~~~D~~~~~~~~~~~~~~~~~~g~i  126 (248)
                      ++.|+|++|.+|.++|..|+.+|.  ++++.+.+  +++.....+..... ......+. .+ ++       .++.+.+-
T Consensus         2 KI~IIGaaG~VG~~~a~~l~~~~~~~elvLiDi~--~a~g~alDL~~~~~-~~~i~~~~-~~-~~-------~y~~~~da   69 (310)
T cd01337           2 KVAVLGAAGGIGQPLSLLLKLNPLVSELALYDIV--NTPGVAADLSHINT-PAKVTGYL-GP-EE-------LKKALKGA   69 (310)
T ss_pred             EEEEECCCCHHHHHHHHHHHhCCCCcEEEEEecC--ccceeehHhHhCCC-cceEEEec-CC-Cc-------hHHhcCCC
Confidence            578899999999999999998884  89999998  33333333333211 11111110 00 01       12334589


Q ss_pred             cEEEEccccCCcccccccCChHHHHHHHHhhhHHHHHHHHHHhhhhhhcCCeEEEEcCcc
Q 044010          127 DHLVNNAGISSVALFEDIVNITDFKQIMNINFWGSVYTTRFAVPHLRYTKGKIVVLSSAA  186 (248)
Q Consensus       127 d~vv~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~g~iV~isS~~  186 (248)
                      |++|.+||.....   .    +.-.+.+..|..-.-.+.+.+.++  ..++.++++|.-.
T Consensus        70 DivvitaG~~~k~---g----~tR~dll~~N~~i~~~i~~~i~~~--~p~a~vivvtNPv  120 (310)
T cd01337          70 DVVVIPAGVPRKP---G----MTRDDLFNINAGIVRDLATAVAKA--CPKALILIISNPV  120 (310)
T ss_pred             CEEEEeCCCCCCC---C----CCHHHHHHHHHHHHHHHHHHHHHh--CCCeEEEEccCch
Confidence            9999999985321   1    223455666766665555555444  1347777777644

MDH is one of the key enzymes in the citric acid cycle, facilitating both the conversion of malate to oxaloacetate and replenishing levels of oxalacetate by reductive carboxylation of pyruvate. Members of this subfamily are localized to the glycosome and mitochondria. MDHs are part of the NAD(P)-binding Rossmann fold superfamily, which includes a wide variety of protein families including the NAD(P)-binding domains of alcohol dehydrogenases, tyrosine-dependent oxidoreductases, glyceraldehyde-3-phosphate dehydrogenases, formate/glycerate dehydrogenases, siroheme synthases, 6-phosphogluconate dehydrogenases, aminoacid dehydrogenases, repressor rex, and NAD-binding potassium channel domains, among others.

>TIGR01915 npdG NADPH-dependent F420 reductase

Probab=95.81  E-value=0.027  Score=46.32  Aligned_cols=42  Identities=24%  Similarity=0.366  Sum_probs=36.3

Q ss_pred             EEEEcCCCChHHHHHHHHHHHcCCeEEEEeCCcchHHHHHHH
Q 044010           49 VVIITGASSGIGEHLAYEYARRGACLALCARREKSLEEVADT   90 (248)
Q Consensus        49 ~~lVtGg~~gIG~aia~~l~~~G~~V~l~~r~~~~~~~~~~~   90 (248)
                      ++.|.||+|.+|.++++.|++.|++|.+.+|++++.+...+.
T Consensus         2 kI~IIGG~G~mG~ala~~L~~~G~~V~v~~r~~~~~~~l~~~   43 (219)
T TIGR01915         2 KIAVLGGTGDQGKGLALRLAKAGNKIIIGSRDLEKAEEAAAK   43 (219)
T ss_pred             EEEEEcCCCHHHHHHHHHHHhCCCEEEEEEcCHHHHHHHHHH
Confidence            478899999999999999999999999999998776665543

This model represents a subset of a parent family described by Pfam model pfam03807. Unlike the parent family, members of this family are found only in species with evidence of coenzyme F420. All members of this family are believed to act as NADPH-dependent F420 reductase.

>PTZ00082 L-lactate dehydrogenase; Provisional

Probab=95.81  E-value=0.29  Score=42.78  Aligned_cols=119  Identities=12%  Similarity=0.136  Sum_probs=67.4

Q ss_pred             CCCEEEEcCCCChHHHHHHHHHHHcCC-eEEEEeCCcchHHHHHHHHHhh---CCCcEEEEEccCCCHHHHHHHHHHHHh
Q 044010           46 SGKVVIITGASSGIGEHLAYEYARRGA-CLALCARREKSLEEVADTAREI---GSPDVITIRADVSKVDDCRSLVEETMN  121 (248)
Q Consensus        46 ~~k~~lVtGg~~gIG~aia~~l~~~G~-~V~l~~r~~~~~~~~~~~l~~~---~~~~v~~~~~D~~~~~~~~~~~~~~~~  121 (248)
                      +.+++.|.| +|.+|..++..++.+|. +|++++.+++..+.....+...   .+....+..  .+|.+           
T Consensus         5 ~~~KI~IIG-aG~vG~~ia~~la~~gl~~i~LvDi~~~~~~~~~ld~~~~~~~~~~~~~I~~--~~d~~-----------   70 (321)
T PTZ00082          5 KRRKISLIG-SGNIGGVMAYLIVLKNLGDVVLFDIVKNIPQGKALDISHSNVIAGSNSKVIG--TNNYE-----------   70 (321)
T ss_pred             CCCEEEEEC-CCHHHHHHHHHHHhCCCCeEEEEeCCCchhhHHHHHHHhhhhccCCCeEEEE--CCCHH-----------
Confidence            457889999 48899999999999995 9999999987643222111111   111122221  12221           


Q ss_pred             HcCCccEEEEccccCCcccccccCChHHHHHHHHhhhHHHHHHHHHHhhhhhhc--CCeEEEEcC
Q 044010          122 HFGRLDHLVNNAGISSVALFEDIVNITDFKQIMNINFWGSVYTTRFAVPHLRYT--KGKIVVLSS  184 (248)
Q Consensus       122 ~~g~id~vv~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~--~g~iV~isS  184 (248)
                      .+.+-|++|.++|...... ....++ +-.+.+..|+.    +.+.+.+.+.+.  ++.++++|.
T Consensus        71 ~l~~aDiVI~tag~~~~~~-~~~~~~-~r~~~l~~n~~----i~~~i~~~i~~~~p~a~~iv~sN  129 (321)
T PTZ00082         71 DIAGSDVVIVTAGLTKRPG-KSDKEW-NRDDLLPLNAK----IMDEVAEGIKKYCPNAFVIVITN  129 (321)
T ss_pred             HhCCCCEEEECCCCCCCCC-CCcCCC-CHHHHHHHHHH----HHHHHHHHHHHHCCCeEEEEecC
Confidence            2247999999999764321 111111 22444555543    455555555432  356777664

>PF01113 DapB_N: Dihydrodipicolinate reductase, N-terminus; InterPro: IPR000846 Dihydrodipicolinate reductase catalyzes the second step in the biosynthesis of diaminopimelic acid and lysine, the NAD or NADP-dependent reduction of 2,3-dihydrodipicolinate into 2,3,4,5-tetrahydrodipicolinate [, , ]

Probab=95.81  E-value=0.1  Score=38.94  Aligned_cols=80  Identities=20%  Similarity=0.268  Sum_probs=53.9

Q ss_pred             EEEEcCCCChHHHHHHHHHHH-cCCeE-EEEeCCcc-hH-----------------HHHHHHHHhhCCCcEEEEEccCCC
Q 044010           49 VVIITGASSGIGEHLAYEYAR-RGACL-ALCARREK-SL-----------------EEVADTAREIGSPDVITIRADVSK  108 (248)
Q Consensus        49 ~~lVtGg~~gIG~aia~~l~~-~G~~V-~l~~r~~~-~~-----------------~~~~~~l~~~~~~~v~~~~~D~~~  108 (248)
                      ++.|.|.+|-+|+.+++.+.+ .|.++ -.++|+.+ ..                 .+..+.+.+..+     +..|+|.
T Consensus         2 rV~i~G~~GrMG~~i~~~i~~~~~~~lv~~v~~~~~~~~g~d~g~~~~~~~~~~~v~~~l~~~~~~~D-----VvIDfT~   76 (124)
T PF01113_consen    2 RVGIVGASGRMGRAIAEAILESPGFELVGAVDRKPSAKVGKDVGELAGIGPLGVPVTDDLEELLEEAD-----VVIDFTN   76 (124)
T ss_dssp             EEEEETTTSHHHHHHHHHHHHSTTEEEEEEEETTTSTTTTSBCHHHCTSST-SSBEBS-HHHHTTH-S-----EEEEES-
T ss_pred             EEEEECCCCHHHHHHHHHHHhcCCcEEEEEEecCCcccccchhhhhhCcCCcccccchhHHHhcccCC-----EEEEcCC
Confidence            578999999999999999999 57774 44556551 00                 011122221222     7789999


Q ss_pred             HHHHHHHHHHHHhHcCCccEEEEcccc
Q 044010          109 VDDCRSLVEETMNHFGRLDHLVNNAGI  135 (248)
Q Consensus       109 ~~~~~~~~~~~~~~~g~id~vv~~ag~  135 (248)
                      ++.+.+.++.+.+.  ++.+++-+.|.
T Consensus        77 p~~~~~~~~~~~~~--g~~~ViGTTG~  101 (124)
T PF01113_consen   77 PDAVYDNLEYALKH--GVPLVIGTTGF  101 (124)
T ss_dssp             HHHHHHHHHHHHHH--T-EEEEE-SSS
T ss_pred             hHHhHHHHHHHHhC--CCCEEEECCCC
Confidence            99999999988777  78899888876

In Escherichia coli and Mycobacterium tuberculosis, dihydrodipicolinate reductase has equal specificity for NADH and NADPH, however in Thermotoga maritima there it has a greater affinity for NADPH []. In addition, the enzyme is inhibited by high concentrations of its substrate, which consequently acts as a feedback control on the lysine biosynthesis pathway. In T. maritima, the enzyme also lacks N-terminal and C-terminal loops which are present in enzyme of the former two organisms. This entry represents the N-terminal domain of dihydrodipicolinate reductase which binds the dinucleotide NAD(P)H.; GO: 0008839 dihydrodipicolinate reductase activity, 0009089 lysine biosynthetic process via diaminopimelate, 0055114 oxidation-reduction process; PDB: 3QY9_D 1VM6_C 1ARZ_A 1DIH_A 1DRW_A 1DRV_A 1DRU_A 2DAP_A 1DAP_B 3DAP_A ....

>cd05290 LDH_3 A subgroup of L-lactate dehydrogenases

Probab=95.80  E-value=0.46  Score=41.28  Aligned_cols=111  Identities=15%  Similarity=0.109  Sum_probs=67.6

Q ss_pred             EEEcCCCChHHHHHHHHHHHcCC--eEEEEeCCcchHHHHHHHHHhhCC----CcEEEEEccCCCHHHHHHHHHHHHhHc
Q 044010           50 VIITGASSGIGEHLAYEYARRGA--CLALCARREKSLEEVADTAREIGS----PDVITIRADVSKVDDCRSLVEETMNHF  123 (248)
Q Consensus        50 ~lVtGg~~gIG~aia~~l~~~G~--~V~l~~r~~~~~~~~~~~l~~~~~----~~v~~~~~D~~~~~~~~~~~~~~~~~~  123 (248)
                      +.|.|+ |.+|..+|..|+.+|.  ++++.+.++++++.....+.....    ..+.+...   +.           +.+
T Consensus         2 i~IIGa-G~VG~~~a~~l~~~~~~~elvL~Di~~~~a~g~a~DL~~~~~~~~~~~~~i~~~---~y-----------~~~   66 (307)
T cd05290           2 LVVIGA-GHVGSAVLNYALALGLFSEIVLIDVNEGVAEGEALDFHHATALTYSTNTKIRAG---DY-----------DDC   66 (307)
T ss_pred             EEEECC-CHHHHHHHHHHHhcCCCCEEEEEeCCcchhhHHHHHHHhhhccCCCCCEEEEEC---CH-----------HHh
Confidence            467777 9999999999998875  799999998877766665654221    13333332   22           233


Q ss_pred             CCccEEEEccccCCcccccccCChHHHHHHHHhhhHHHHHHHHHHhhhhhhc--CCeEEEEcC
Q 044010          124 GRLDHLVNNAGISSVALFEDIVNITDFKQIMNINFWGSVYTTRFAVPHLRYT--KGKIVVLSS  184 (248)
Q Consensus       124 g~id~vv~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~--~g~iV~isS  184 (248)
                      .+-|++|.+||.....   .+ +. +-.+.+..|..    +++.+.+.+.+.  ++.++.+|-
T Consensus        67 ~~aDivvitaG~~~kp---g~-tr-~R~dll~~N~~----I~~~i~~~i~~~~p~~i~ivvsN  120 (307)
T cd05290          67 ADADIIVITAGPSIDP---GN-TD-DRLDLAQTNAK----IIREIMGNITKVTKEAVIILITN  120 (307)
T ss_pred             CCCCEEEECCCCCCCC---CC-Cc-hHHHHHHHHHH----HHHHHHHHHHHhCCCeEEEEecC
Confidence            4899999999975321   11 21 12344444544    445555555433  255555553

L-lactate dehydrogenases (LDH) are tetrameric enzymes catalyzing the last step of glycolysis in which pyruvate is converted to L-lactate. This subgroup is composed of some bacterial LDHs from firmicutes, gammaproteobacteria, and actinobacteria. Vertebrate LDHs are non-allosteric, but some bacterial LDHs are activated by an allosteric effector such as fructose-1,6-bisphosphate. LDHs are part of the NAD(P)-binding Rossmann fold superfamily, which includes a wide variety of protein families including the NAD(P)-binding domains of alcohol dehydrogenases, tyrosine-dependent oxidoreductases, glyceraldehyde-3-phosphate dehydrogenases, formate/glycerate dehydrogenases, siroheme synthases, 6-phosphogluconate dehydrogenase, aminoacid dehydrogenases, repressor rex, and NAD-binding potassium channel domains, among others.

>PRK06223 malate dehydrogenase; Reviewed

Probab=95.76  E-value=0.25  Score=42.69  Aligned_cols=76  Identities=24%  Similarity=0.207  Sum_probs=48.6

Q ss_pred             CEEEEcCCCChHHHHHHHHHHHcCC-eEEEEeCCcchHHHHHHHHHhhCC---CcEEEEEccCCCHHHHHHHHHHHHhHc
Q 044010           48 KVVIITGASSGIGEHLAYEYARRGA-CLALCARREKSLEEVADTAREIGS---PDVITIRADVSKVDDCRSLVEETMNHF  123 (248)
Q Consensus        48 k~~lVtGg~~gIG~aia~~l~~~G~-~V~l~~r~~~~~~~~~~~l~~~~~---~~v~~~~~D~~~~~~~~~~~~~~~~~~  123 (248)
                      +++.|.|+ |.+|..++..++..|. +|++.+++++.++.....+.....   .... +.. -+|.+           .+
T Consensus         3 ~KI~VIGa-G~vG~~ia~~la~~~~~ev~L~D~~~~~~~~~~~dl~~~~~~~~~~~~-i~~-~~d~~-----------~~   68 (307)
T PRK06223          3 KKISIIGA-GNVGATLAHLLALKELGDVVLFDIVEGVPQGKALDIAEAAPVEGFDTK-ITG-TNDYE-----------DI   68 (307)
T ss_pred             CEEEEECC-CHHHHHHHHHHHhCCCeEEEEEECCCchhHHHHHHHHhhhhhcCCCcE-EEe-CCCHH-----------HH
Confidence            46788888 8999999999999875 999999988766544333322211   0111 110 11211           12


Q ss_pred             CCccEEEEccccCC
Q 044010          124 GRLDHLVNNAGISS  137 (248)
Q Consensus       124 g~id~vv~~ag~~~  137 (248)
                      .+-|++|.++|...
T Consensus        69 ~~aDiVii~~~~p~   82 (307)
T PRK06223         69 AGSDVVVITAGVPR   82 (307)
T ss_pred             CCCCEEEECCCCCC
Confidence            37899999998753

>cd08239 THR_DH_like L-threonine dehydrogenase (TDH)-like

Probab=95.76  E-value=0.05  Score=47.37  Aligned_cols=78  Identities=18%  Similarity=0.189  Sum_probs=49.8

Q ss_pred             CCCEEEEcCCCChHHHHHHHHHHHcCCe-EEEEeCCcchHHHHHHHHHhhCCCcEEEEEccCCCHHHHHHHHHHHHhHcC
Q 044010           46 SGKVVIITGASSGIGEHLAYEYARRGAC-LALCARREKSLEEVADTAREIGSPDVITIRADVSKVDDCRSLVEETMNHFG  124 (248)
Q Consensus        46 ~~k~~lVtGg~~gIG~aia~~l~~~G~~-V~l~~r~~~~~~~~~~~l~~~~~~~v~~~~~D~~~~~~~~~~~~~~~~~~g  124 (248)
                      .|.+++|+|+ |++|...++.+...|++ |+++++++++.+.+ +   +.+. .   ...|..+.+ .+++.+ +.. ..
T Consensus       163 ~g~~vlV~G~-G~vG~~~~~~ak~~G~~~vi~~~~~~~~~~~~-~---~~ga-~---~~i~~~~~~-~~~~~~-~~~-~~  230 (339)
T cd08239         163 GRDTVLVVGA-GPVGLGALMLARALGAEDVIGVDPSPERLELA-K---ALGA-D---FVINSGQDD-VQEIRE-LTS-GA  230 (339)
T ss_pred             CCCEEEEECC-CHHHHHHHHHHHHcCCCEEEEECCCHHHHHHH-H---HhCC-C---EEEcCCcch-HHHHHH-HhC-CC
Confidence            4889999975 89999998888788998 99888877654433 2   2232 1   223444433 332222 111 12


Q ss_pred             CccEEEEcccc
Q 044010          125 RLDHLVNNAGI  135 (248)
Q Consensus       125 ~id~vv~~ag~  135 (248)
                      .+|+++.+.|.
T Consensus       231 ~~d~vid~~g~  241 (339)
T cd08239         231 GADVAIECSGN  241 (339)
T ss_pred             CCCEEEECCCC
Confidence            69999998774

MDR/AHD-like proteins, including a protein annotated as a threonine dehydrogenase. L-threonine dehydrogenase (TDH) catalyzes the zinc-dependent formation of 2-amino-3-ketobutyrate from L-threonine via NAD(H)-dependent oxidation. The zinc-dependent alcohol dehydrogenases (ADHs) catalyze the NAD(P)(H)-dependent interconversion of alcohols to aldehydes or ketones. Zinc-dependent ADHs are medium chain dehydrogenase/reductase type proteins (MDRs) and have a NAD(P)(H)-binding domain in a Rossmann fold of an beta-alpha form. The N-terminal region typically has an all-beta catalytic domain. In addition to alcohol dehydrogenases, this group includes quinone reductase, sorbitol dehydrogenase, formaldehyde dehydrogenase, butanediol DH, ketose reductase, cinnamyl reductase, and numerous others. These proteins typically form dimers (typically higher plants, mammals) or tetramers (yeast, bacteria), and generally have 2 tightly bound zinc at

>cd05295 MDH_like Malate dehydrogenase-like

Probab=95.74  E-value=0.1  Score=47.52  Aligned_cols=115  Identities=15%  Similarity=0.062  Sum_probs=70.7

Q ss_pred             CEEEEcCCCChHHHHHHHHHHHc---CC----eEEEEeC--CcchHHHHHHHHHhhC-C--CcEEEEEccCCCHHHHHHH
Q 044010           48 KVVIITGASSGIGEHLAYEYARR---GA----CLALCAR--REKSLEEVADTAREIG-S--PDVITIRADVSKVDDCRSL  115 (248)
Q Consensus        48 k~~lVtGg~~gIG~aia~~l~~~---G~----~V~l~~r--~~~~~~~~~~~l~~~~-~--~~v~~~~~D~~~~~~~~~~  115 (248)
                      -+++|||++|-||+++..++++-   |.    .+++.+.  +.+.++...-++.... .  ..+.+. .|  +.      
T Consensus       124 ~~V~vtgAag~i~Y~l~~~ia~G~~fG~~~~v~L~LlDi~~~~~~l~G~amDL~D~a~pll~~v~i~-~~--~~------  194 (452)
T cd05295         124 LQVCITNASAPLCYHLIPSLASGEVFGMEEEISIHLLDSPENLEKLKGLVMEVEDLAFPLLRGISVT-TD--LD------  194 (452)
T ss_pred             eEEEEecCcHHHHHHHHHHHhCCcccCCCCeEEEEEEcCCCchhhHHHHHHHHHHhHHhhcCCcEEE-EC--CH------
Confidence            36999999999999999999973   53    4788888  5677776666666543 1  122222 11  11      


Q ss_pred             HHHHHhHcCCccEEEEccccCCcccccccCChHHHHHHHHhhhHHHHHHHHHHhhhhhhcCCeEEEEc
Q 044010          116 VEETMNHFGRLDHLVNNAGISSVALFEDIVNITDFKQIMNINFWGSVYTTRFAVPHLRYTKGKIVVLS  183 (248)
Q Consensus       116 ~~~~~~~~g~id~vv~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~g~iV~is  183 (248)
                           +.+.+.|++|..+|.....   .    ++-.+.+..|..-.-...+.+.+.-.+..+.+|.+|
T Consensus       195 -----ea~~daDvvIitag~prk~---G----~~R~DLL~~N~~Ifk~~g~~I~~~a~~~~~VlVv~t  250 (452)
T cd05295         195 -----VAFKDAHVIVLLDDFLIKE---G----EDLEGCIRSRVAICQLYGPLIEKNAKEDVKVIVAGR  250 (452)
T ss_pred             -----HHhCCCCEEEECCCCCCCc---C----CCHHHHHHHHHHHHHHHHHHHHHhCCCCCeEEEEeC
Confidence                 2335899999999975321   1    223455666766665566665544332334444443

These MDH-like proteins are related to other groups in the MDH family but do not have conserved substrate and cofactor binding residues. MDH is one of the key enzymes in the citric acid cycle, facilitating both the conversion of malate to oxaloacetate and replenishing levels of oxalacetate by reductive carboxylation of pyruvate. Members of this subgroup are uncharacterized MDH-like proteins from animals. They are part of the NAD(P)-binding Rossmann fold superfamily, which includes a wide variety of protein families including the NAD(P)-binding domains of alcohol dehydrogenases, tyrosine-dependent oxidoreductases, glyceraldehyde-3-phosphate dehydrogenases, formate/glycerate dehydrogenases, siroheme synthases, 6-phosphogluconate dehydrogenases, aminoacid dehydrogenases, repressor rex, and NAD-binding potassium channel domains, among others.

>TIGR01757 Malate-DH_plant malate dehydrogenase, NADP-dependent

Probab=95.74  E-value=0.17  Score=45.25  Aligned_cols=111  Identities=21%  Similarity=0.182  Sum_probs=67.9

Q ss_pred             EEEEcCCCChHHHHHHHHHHHcCC-e----EEE----EeCCcchHHHHHHHHHhhC-C--CcEEEEEccCCCHHHHHHHH
Q 044010           49 VVIITGASSGIGEHLAYEYARRGA-C----LAL----CARREKSLEEVADTAREIG-S--PDVITIRADVSKVDDCRSLV  116 (248)
Q Consensus        49 ~~lVtGg~~gIG~aia~~l~~~G~-~----V~l----~~r~~~~~~~~~~~l~~~~-~--~~v~~~~~D~~~~~~~~~~~  116 (248)
                      ++.|+|++|.+|.++|..|+.+|. .    |.+    .+++.++++.....+...- .  ..+. +..  .+.       
T Consensus        46 KV~IIGAaG~VG~~~A~~l~~~~l~~~~~ei~L~L~diD~~~~~a~g~a~DL~d~a~~~~~~v~-i~~--~~y-------  115 (387)
T TIGR01757        46 NVAVSGAAGMISNHLLFMLASGEVFGQDQPIALKLLGSERSKEALEGVAMELEDSLYPLLREVS-IGI--DPY-------  115 (387)
T ss_pred             EEEEECCCcHHHHHHHHHHHhccccCCCCceEEEEeccCccchhhhHHHHHHHHhhhhhcCceE-Eec--CCH-------
Confidence            699999999999999999998864 3    344    4888888777766666432 1  1111 111  122       


Q ss_pred             HHHHhHcCCccEEEEccccCCcccccccCChHHHHHHHHhhhHHHHHHHHHHhhhhhh---cCCeEEEEcC
Q 044010          117 EETMNHFGRLDHLVNNAGISSVALFEDIVNITDFKQIMNINFWGSVYTTRFAVPHLRY---TKGKIVVLSS  184 (248)
Q Consensus       117 ~~~~~~~g~id~vv~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~---~~g~iV~isS  184 (248)
                          +.+.+.|++|.+||... ++  .    ++-.+.+..|..-.    +.+.+.+.+   ..+.++++|.
T Consensus       116 ----~~~kdaDIVVitAG~pr-kp--g----~tR~dll~~N~~I~----k~i~~~I~~~a~~~~iviVVsN  171 (387)
T TIGR01757       116 ----EVFEDADWALLIGAKPR-GP--G----MERADLLDINGQIF----ADQGKALNAVASKNCKVLVVGN  171 (387)
T ss_pred             ----HHhCCCCEEEECCCCCC-CC--C----CCHHHHHHHHHHHH----HHHHHHHHHhCCCCeEEEEcCC
Confidence                23358999999999753 21  1    22334555555544    444444443   2366776663

This model represents the NADP-dependent malate dehydrogenase found in plants, mosses and green algae and localized to the chloroplast. Malate dehydrogenase converts oxaloacetate into malate, a critical step in the C4 cycle which allows circumvention of the effects of photorespiration. Malate is subsequenctly transported from the chloroplast to the cytoplasm (and then to the bundle sheath cells in C4 plants). The plant and moss enzymes are light regulated via cysteine disulfide bonds. The enzyme from Sorghum has been crystallized.

>PRK08655 prephenate dehydrogenase; Provisional

Probab=95.72  E-value=0.14  Score=46.67  Aligned_cols=38  Identities=24%  Similarity=0.365  Sum_probs=33.5

Q ss_pred             EEEEcCCCChHHHHHHHHHHHcCCeEEEEeCCcchHHH
Q 044010           49 VVIITGASSGIGEHLAYEYARRGACLALCARREKSLEE   86 (248)
Q Consensus        49 ~~lVtGg~~gIG~aia~~l~~~G~~V~l~~r~~~~~~~   86 (248)
                      ++.|.||.|++|.++++.|.++|++|.+.+|+++..++
T Consensus         2 kI~IIGG~G~mG~slA~~L~~~G~~V~v~~r~~~~~~~   39 (437)
T PRK08655          2 KISIIGGTGGLGKWFARFLKEKGFEVIVTGRDPKKGKE   39 (437)
T ss_pred             EEEEEecCCHHHHHHHHHHHHCCCEEEEEECChHHHHH
Confidence            58899999999999999999999999999998765443

>cd05311 NAD_bind_2_malic_enz NAD(P) binding domain of malic enzyme (ME), subgroup 2

Probab=95.70  E-value=0.071  Score=44.17  Aligned_cols=37  Identities=19%  Similarity=0.326  Sum_probs=33.8

Q ss_pred             cCCCCCEEEEcCCCChHHHHHHHHHHHcCC---eEEEEeCC
Q 044010           43 EDVSGKVVIITGASSGIGEHLAYEYARRGA---CLALCARR   80 (248)
Q Consensus        43 ~~~~~k~~lVtGg~~gIG~aia~~l~~~G~---~V~l~~r~   80 (248)
                      .++++++++|.|+ |+.|.++++.|.+.|.   ++.+++|+
T Consensus        21 ~~l~~~rvlvlGA-GgAg~aiA~~L~~~G~~~~~i~ivdr~   60 (226)
T cd05311          21 KKIEEVKIVINGA-GAAGIAIARLLLAAGAKPENIVVVDSK   60 (226)
T ss_pred             CCccCCEEEEECc-hHHHHHHHHHHHHcCcCcceEEEEeCC
Confidence            4789999999988 9999999999999997   59999998

Malic enzyme (ME), a member of the amino acid dehydrogenase (DH)-like domain family, catalyzes the oxidative decarboxylation of L-malate to pyruvate in the presence of cations (typically Mg++ or Mn++) with the concomitant reduction of cofactor NAD+ or NADP+. ME has been found in all organisms, and plays important roles in diverse metabolic pathways such as photosynthesis and lipogenesis. This enzyme generally forms homotetramers. The conversion of malate to pyruvate by ME typically involves oxidation of malate to produce oxaloacetate, followed by decarboxylation of oxaloacetate to produce pyruvate and CO2. This subfamily consists primarily of archaeal and bacterial ME. Amino acid DH-like NAD(P)-binding domains are members of the Rossmann fold superfamily and include glutamate, leucine, and phenylalanine DHs, methylene tetrahydrofolate DH, methylene-tetrahydromethanopterin DH, methylene-tetrahydroph

>PRK10537 voltage-gated potassium channel; Provisional

Probab=95.70  E-value=0.14  Score=46.01  Aligned_cols=71  Identities=17%  Similarity=0.109  Sum_probs=48.7

Q ss_pred             CCCEEEEcCCCChHHHHHHHHHHHcCCeEEEEeCCcchHHHHHHHHHhhCCCcEEEEEccCCCHHHHHHHHHHHHhHcCC
Q 044010           46 SGKVVIITGASSGIGEHLAYEYARRGACLALCARREKSLEEVADTAREIGSPDVITIRADVSKVDDCRSLVEETMNHFGR  125 (248)
Q Consensus        46 ~~k~~lVtGg~~gIG~aia~~l~~~G~~V~l~~r~~~~~~~~~~~l~~~~~~~v~~~~~D~~~~~~~~~~~~~~~~~~g~  125 (248)
                      .+++++|.|. +.+|+.+++.|.++|.++++++.+..  +    +..   ..+..++..|.+|++.++++=      ..+
T Consensus       239 ~k~HvII~G~-g~lg~~v~~~L~~~g~~vvVId~d~~--~----~~~---~~g~~vI~GD~td~e~L~~Ag------I~~  302 (393)
T PRK10537        239 RKDHFIICGH-SPLAINTYLGLRQRGQAVTVIVPLGL--E----HRL---PDDADLIPGDSSDSAVLKKAG------AAR  302 (393)
T ss_pred             cCCeEEEECC-ChHHHHHHHHHHHCCCCEEEEECchh--h----hhc---cCCCcEEEeCCCCHHHHHhcC------ccc
Confidence            3567888877 67999999999999998888876521  1    111   124567899999998776552      125


Q ss_pred             ccEEEEc
Q 044010          126 LDHLVNN  132 (248)
Q Consensus       126 id~vv~~  132 (248)
                      -+.++-.
T Consensus       303 A~aVI~~  309 (393)
T PRK10537        303 ARAILAL  309 (393)
T ss_pred             CCEEEEc
Confidence            5666543

>TIGR02818 adh_III_F_hyde S-(hydroxymethyl)glutathione dehydrogenase/class III alcohol dehydrogenase

Probab=95.69  E-value=0.085  Score=46.76  Aligned_cols=79  Identities=16%  Similarity=0.205  Sum_probs=51.0

Q ss_pred             CCCEEEEcCCCChHHHHHHHHHHHcCC-eEEEEeCCcchHHHHHHHHHhhCCCcEEEEEccCCC-HHHHHHHHHHHHhHc
Q 044010           46 SGKVVIITGASSGIGEHLAYEYARRGA-CLALCARREKSLEEVADTAREIGSPDVITIRADVSK-VDDCRSLVEETMNHF  123 (248)
Q Consensus        46 ~~k~~lVtGg~~gIG~aia~~l~~~G~-~V~l~~r~~~~~~~~~~~l~~~~~~~v~~~~~D~~~-~~~~~~~~~~~~~~~  123 (248)
                      .|.+++|+|+ |++|...++.+...|+ +|+.+++++++.+.+    ++.+. .   ...|..+ .+++.+.+.++..  
T Consensus       185 ~g~~VlV~G~-G~iG~~a~q~Ak~~G~~~Vi~~~~~~~~~~~a----~~~Ga-~---~~i~~~~~~~~~~~~v~~~~~--  253 (368)
T TIGR02818       185 EGDTVAVFGL-GGIGLSVIQGARMAKASRIIAIDINPAKFELA----KKLGA-T---DCVNPNDYDKPIQEVIVEITD--  253 (368)
T ss_pred             CCCEEEEECC-CHHHHHHHHHHHHcCCCeEEEEcCCHHHHHHH----HHhCC-C---eEEcccccchhHHHHHHHHhC--
Confidence            5789999975 8999998887777898 799988887655543    22232 1   1224332 2233333333322  


Q ss_pred             CCccEEEEcccc
Q 044010          124 GRLDHLVNNAGI  135 (248)
Q Consensus       124 g~id~vv~~ag~  135 (248)
                      +.+|+++.++|.
T Consensus       254 ~g~d~vid~~G~  265 (368)
T TIGR02818       254 GGVDYSFECIGN  265 (368)
T ss_pred             CCCCEEEECCCC
Confidence            379999999874

The members of this protein family show dual function. First, they remove formaldehyde, a toxic metabolite, by acting as S-(hydroxymethyl)glutathione dehydrogenase (1.1.1.284). S-(hydroxymethyl)glutathione can form spontaneously from formaldehyde and glutathione, and so this enzyme previously was designated glutathione-dependent formaldehyde dehydrogenase. These same proteins are also designated alcohol dehydrogenase (EC 1.1.1.1) of class III, for activities that do not require glutathione; they tend to show poor activity for ethanol among their various substrate alcohols.

>PRK07411 hypothetical protein; Validated

Probab=95.66  E-value=0.1  Score=46.80  Aligned_cols=64  Identities=19%  Similarity=0.250  Sum_probs=46.0

Q ss_pred             cCCCCCEEEEcCCCChHHHHHHHHHHHcCC-eEEEEeCCc-------------------chHHHHHHHHHhhCC-CcEEE
Q 044010           43 EDVSGKVVIITGASSGIGEHLAYEYARRGA-CLALCARRE-------------------KSLEEVADTAREIGS-PDVIT  101 (248)
Q Consensus        43 ~~~~~k~~lVtGg~~gIG~aia~~l~~~G~-~V~l~~r~~-------------------~~~~~~~~~l~~~~~-~~v~~  101 (248)
                      .++++.+++|.|+ ||+|..+++.|+..|. ++.++|.+.                   .+.+.+.+.+++..+ .++..
T Consensus        34 ~~L~~~~VlivG~-GGlG~~va~~La~~Gvg~l~lvD~D~ve~sNL~RQ~l~~~~dvG~~Ka~~a~~~l~~~np~v~v~~  112 (390)
T PRK07411         34 KRLKAASVLCIGT-GGLGSPLLLYLAAAGIGRIGIVDFDVVDSSNLQRQVIHGTSWVGKPKIESAKNRILEINPYCQVDL  112 (390)
T ss_pred             HHHhcCcEEEECC-CHHHHHHHHHHHHcCCCEEEEECCCEecccccCcCcccChHHCCCcHHHHHHHHHHHHCCCCeEEE
Confidence            4788999999977 7999999999999998 898888753                   245555666666543 23444


Q ss_pred             EEccCC
Q 044010          102 IRADVS  107 (248)
Q Consensus       102 ~~~D~~  107 (248)
                      +...++
T Consensus       113 ~~~~~~  118 (390)
T PRK07411        113 YETRLS  118 (390)
T ss_pred             EecccC
Confidence            444443

>cd08292 ETR_like_2 2-enoyl thioester reductase (ETR) like proteins, child 2

Probab=95.66  E-value=0.061  Score=46.27  Aligned_cols=80  Identities=20%  Similarity=0.295  Sum_probs=51.1

Q ss_pred             CCCEEEEcCCCChHHHHHHHHHHHcCCeEEEEeCCcchHHHHHHHHHhhCCCcEEEEEccCCCHHHHHHHHHHHHhHcCC
Q 044010           46 SGKVVIITGASSGIGEHLAYEYARRGACLALCARREKSLEEVADTAREIGSPDVITIRADVSKVDDCRSLVEETMNHFGR  125 (248)
Q Consensus        46 ~~k~~lVtGg~~gIG~aia~~l~~~G~~V~l~~r~~~~~~~~~~~l~~~~~~~v~~~~~D~~~~~~~~~~~~~~~~~~g~  125 (248)
                      +|.+++|.|+++++|.++++.....|++++++.++.++.+..    ++.+. + .++  |..+. +..+.+.+... ..+
T Consensus       139 ~g~~vlI~g~~g~ig~~~~~~a~~~G~~v~~~~~~~~~~~~~----~~~g~-~-~~~--~~~~~-~~~~~i~~~~~-~~~  208 (324)
T cd08292         139 PGQWLIQNAAGGAVGKLVAMLAAARGINVINLVRRDAGVAEL----RALGI-G-PVV--STEQP-GWQDKVREAAG-GAP  208 (324)
T ss_pred             CCCEEEEcccccHHHHHHHHHHHHCCCeEEEEecCHHHHHHH----HhcCC-C-EEE--cCCCc-hHHHHHHHHhC-CCC
Confidence            578999999999999999998888899999988877654433    22222 1 122  23332 22222222211 126


Q ss_pred             ccEEEEcccc
Q 044010          126 LDHLVNNAGI  135 (248)
Q Consensus       126 id~vv~~ag~  135 (248)
                      +|+++.++|.
T Consensus       209 ~d~v~d~~g~  218 (324)
T cd08292         209 ISVALDSVGG  218 (324)
T ss_pred             CcEEEECCCC
Confidence            9999988773

2-enoyl thioester reductase (ETR) like proteins. ETR catalyzes the NADPH-dependent conversion of trans-2-enoyl acyl carrier protein/coenzyme A (ACP/CoA) to acyl-(ACP/CoA) in fatty acid synthesis. 2-enoyl thioester reductase activity has been linked in Candida tropicalis as essential in maintaining mitiochondrial respiratory function. This ETR family is a part of the medium chain dehydrogenase/reductase family, but lack the zinc coordination sites characteristic of the 2-enoyl thioester reductase (ETR) like proteins. ETR catalyzes the NADPH-dependent dependent conversion of trans-2-enoyl acyl carrier protein/coenzyme A (ACP/CoA) to acyl-(ACP/CoA) in fatty acid synthesis. 2-enoyl thioester reductase activity has been linked in Candida tropicalis as essential in maintaining mitiochondrial respiratory function. This ETR family is a part of the medium chain dehydrogenase/reductase family, but lack the zinc coordina

>PF13241 NAD_binding_7: Putative NAD(P)-binding; PDB: 3DFZ_B 1PJT_A 1PJS_A 1PJQ_A 1KYQ_B

Probab=95.64  E-value=0.011  Score=42.60  Aligned_cols=38  Identities=21%  Similarity=0.287  Sum_probs=32.8

Q ss_pred             cCCCCCEEEEcCCCChHHHHHHHHHHHcCCeEEEEeCCc
Q 044010           43 EDVSGKVVIITGASSGIGEHLAYEYARRGACLALCARRE   81 (248)
Q Consensus        43 ~~~~~k~~lVtGg~~gIG~aia~~l~~~G~~V~l~~r~~   81 (248)
                      .+++||.+||.|| |.+|..-++.|++.|++|.+++...
T Consensus         3 l~l~~~~vlVvGg-G~va~~k~~~Ll~~gA~v~vis~~~   40 (103)
T PF13241_consen    3 LDLKGKRVLVVGG-GPVAARKARLLLEAGAKVTVISPEI   40 (103)
T ss_dssp             E--TT-EEEEEEE-SHHHHHHHHHHCCCTBEEEEEESSE
T ss_pred             EEcCCCEEEEECC-CHHHHHHHHHHHhCCCEEEEECCch
Confidence            3789999999998 8999999999999999999999986

>cd08238 sorbose_phosphate_red L-sorbose-1-phosphate reductase

Probab=95.64  E-value=0.069  Score=48.12  Aligned_cols=89  Identities=12%  Similarity=0.082  Sum_probs=51.6

Q ss_pred             CCCEEEEcCCCChHHHHHHHHHHHcCC---eEEEEeCCcchHHHHHHHHHhhC-CCcEEEEEccCCCHHHHHHHHHHHHh
Q 044010           46 SGKVVIITGASSGIGEHLAYEYARRGA---CLALCARREKSLEEVADTAREIG-SPDVITIRADVSKVDDCRSLVEETMN  121 (248)
Q Consensus        46 ~~k~~lVtGg~~gIG~aia~~l~~~G~---~V~l~~r~~~~~~~~~~~l~~~~-~~~v~~~~~D~~~~~~~~~~~~~~~~  121 (248)
                      .|.+++|.||+|++|...++.+...|+   +|+++++++++.+.+.+...... .........|..+.++..+.+.++..
T Consensus       175 ~g~~VlV~G~~G~vG~~aiq~ak~~G~g~~~Vi~~~~~~~r~~~a~~~~~~~~~~~Ga~~~~i~~~~~~~~~~~v~~~t~  254 (410)
T cd08238         175 PGGNTAILGGAGPMGLMAIDYAIHGPIGPSLLVVTDVNDERLARAQRLFPPEAASRGIELLYVNPATIDDLHATLMELTG  254 (410)
T ss_pred             CCCEEEEEeCCCHHHHHHHHHHHhcccCCceEEEEcCCHHHHHHHHHhccccccccCceEEEECCCccccHHHHHHHHhC
Confidence            578999999999999998776666553   79999998877665443211100 00111122344332333333333221


Q ss_pred             HcCCccEEEEcccc
Q 044010          122 HFGRLDHLVNNAGI  135 (248)
Q Consensus       122 ~~g~id~vv~~ag~  135 (248)
                       ...+|+++.++|.
T Consensus       255 -g~g~D~vid~~g~  267 (410)
T cd08238         255 -GQGFDDVFVFVPV  267 (410)
T ss_pred             -CCCCCEEEEcCCC
Confidence             1258999988763

L-sorbose-1-phosphate reductase, a member of the MDR family, catalyzes the NADPH-dependent conversion of l-sorbose 1-phosphate to d-glucitol 6-phosphate in the metabolism of L-sorbose to (also converts d-fructose 1-phosphate to d-mannitol 6-phosphate). The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P) binding-Rossmann fold domain of an beta-alpha form and an N-terminal catalytic domain with distant homology to GroES. The MDR group contains a host of activities, including the found

>cd08300 alcohol_DH_class_III class III alcohol dehydrogenases

Probab=95.61  E-value=0.072  Score=47.15  Aligned_cols=79  Identities=16%  Similarity=0.227  Sum_probs=52.3

Q ss_pred             CCCEEEEcCCCChHHHHHHHHHHHcCC-eEEEEeCCcchHHHHHHHHHhhCCCcEEEEEccCCCH-HHHHHHHHHHHhHc
Q 044010           46 SGKVVIITGASSGIGEHLAYEYARRGA-CLALCARREKSLEEVADTAREIGSPDVITIRADVSKV-DDCRSLVEETMNHF  123 (248)
Q Consensus        46 ~~k~~lVtGg~~gIG~aia~~l~~~G~-~V~l~~r~~~~~~~~~~~l~~~~~~~v~~~~~D~~~~-~~~~~~~~~~~~~~  123 (248)
                      +|.+++|.|+ +++|...++.+...|+ +|+.+++++++.+.+    ++.+...    ..|..+. +++.+.+.++..  
T Consensus       186 ~g~~VlV~G~-G~vG~~a~~~ak~~G~~~vi~~~~~~~~~~~~----~~lGa~~----~i~~~~~~~~~~~~v~~~~~--  254 (368)
T cd08300         186 PGSTVAVFGL-GAVGLAVIQGAKAAGASRIIGIDINPDKFELA----KKFGATD----CVNPKDHDKPIQQVLVEMTD--  254 (368)
T ss_pred             CCCEEEEECC-CHHHHHHHHHHHHcCCCeEEEEeCCHHHHHHH----HHcCCCE----EEcccccchHHHHHHHHHhC--
Confidence            5889999975 8999999888888899 699999987765533    2223211    2344332 234444444322  


Q ss_pred             CCccEEEEcccc
Q 044010          124 GRLDHLVNNAGI  135 (248)
Q Consensus       124 g~id~vv~~ag~  135 (248)
                      +.+|+++.++|.
T Consensus       255 ~g~d~vid~~g~  266 (368)
T cd08300         255 GGVDYTFECIGN  266 (368)
T ss_pred             CCCcEEEECCCC
Confidence            379999998773

Members identified as glutathione-dependent formaldehyde dehydrogenase(FDH), a member of the zinc dependent/medium chain alcohol dehydrogenase family. FDH converts formaldehyde and NAD(P) to formate and NAD(P)H. The initial step in this process the spontaneous formation of a S-(hydroxymethyl)glutathione adduct from formaldehyde and glutathione, followed by FDH-mediated oxidation (and detoxification) of the adduct to S-formylglutathione. MDH family uses NAD(H) as a cofactor in the interconversion of alcohols and aldehydes or ketones. Like many zinc-dependent alcohol dehydrogenases (ADH) of the medium chain alcohol dehydrogenase/reductase family (MDR), these FDHs form dimers, with 4 zinc ions per dimer. The medium chain alcohol dehydrogenase family (MDR) have a NAD(P)(H)-binding domain in a Rossmann fold of a beta-alpha form. The N-terminal region typically has an all-beta catalytic domain. These proteins typically form dim

>PRK07878 molybdopterin biosynthesis-like protein MoeZ; Validated

Probab=95.56  E-value=0.12  Score=46.46  Aligned_cols=38  Identities=21%  Similarity=0.336  Sum_probs=32.9

Q ss_pred             cCCCCCEEEEcCCCChHHHHHHHHHHHcCC-eEEEEeCCc
Q 044010           43 EDVSGKVVIITGASSGIGEHLAYEYARRGA-CLALCARRE   81 (248)
Q Consensus        43 ~~~~~k~~lVtGg~~gIG~aia~~l~~~G~-~V~l~~r~~   81 (248)
                      ..+++.+++|.|+ ||+|..+++.|+..|. ++.++|.+.
T Consensus        38 ~~L~~~~VlviG~-GGlGs~va~~La~~Gvg~i~lvD~D~   76 (392)
T PRK07878         38 KRLKNARVLVIGA-GGLGSPTLLYLAAAGVGTLGIVEFDV   76 (392)
T ss_pred             HHHhcCCEEEECC-CHHHHHHHHHHHHcCCCeEEEECCCE
Confidence            3678899999977 8999999999999998 898888753

>cd08243 quinone_oxidoreductase_like_1 Quinone oxidoreductase (QOR)

Probab=95.56  E-value=0.076  Score=45.37  Aligned_cols=41  Identities=20%  Similarity=0.267  Sum_probs=35.0

Q ss_pred             CCCCEEEEcCCCChHHHHHHHHHHHcCCeEEEEeCCcchHH
Q 044010           45 VSGKVVIITGASSGIGEHLAYEYARRGACLALCARREKSLE   85 (248)
Q Consensus        45 ~~~k~~lVtGg~~gIG~aia~~l~~~G~~V~l~~r~~~~~~   85 (248)
                      -+|.+++|.|+++++|.++++.....|++|+.+.+++++.+
T Consensus       141 ~~g~~vlV~ga~g~~g~~~~~~a~~~g~~v~~~~~~~~~~~  181 (320)
T cd08243         141 QPGDTLLIRGGTSSVGLAALKLAKALGATVTATTRSPERAA  181 (320)
T ss_pred             CCCCEEEEEcCCChHHHHHHHHHHHcCCEEEEEeCCHHHHH
Confidence            35789999999999999998888889999998888875543

NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. The medium chain alcohol dehydrogenase family (MDR) have a NAD(P)(H)-binding domain in a Rossmann fold of a beta-alpha form. The N-terminal region typically has an all-beta catalytic domain. These proteins typically form dimers (typically higher plants, mammals) or tetramers (yeast, bacteria), and have 2 tightly bound zinc atoms per subunit.

>PRK12550 shikimate 5-dehydrogenase; Reviewed

Probab=95.55  E-value=0.033  Score=47.49  Aligned_cols=44  Identities=25%  Similarity=0.314  Sum_probs=37.2

Q ss_pred             CCEEEEcCCCChHHHHHHHHHHHcCC-eEEEEeCCcchHHHHHHHH
Q 044010           47 GKVVIITGASSGIGEHLAYEYARRGA-CLALCARREKSLEEVADTA   91 (248)
Q Consensus        47 ~k~~lVtGg~~gIG~aia~~l~~~G~-~V~l~~r~~~~~~~~~~~l   91 (248)
                      +|+++|.|+ ||-+++++..|++.|+ +|.+++|+.++.++..+.+
T Consensus       122 ~~~vlilGa-GGaarAi~~aL~~~g~~~i~i~nR~~~~a~~la~~~  166 (272)
T PRK12550        122 DLVVALRGS-GGMAKAVAAALRDAGFTDGTIVARNEKTGKALAELY  166 (272)
T ss_pred             CCeEEEECC-cHHHHHHHHHHHHCCCCEEEEEeCCHHHHHHHHHHh
Confidence            568998886 9999999999999998 6999999988777665543

>PF02737 3HCDH_N: 3-hydroxyacyl-CoA dehydrogenase, NAD binding domain; InterPro: IPR006176 3-hydroxyacyl-CoA dehydrogenase (1

Probab=95.54  E-value=0.039  Score=44.02  Aligned_cols=44  Identities=27%  Similarity=0.400  Sum_probs=35.5

Q ss_pred             EEEEcCCCChHHHHHHHHHHHcCCeEEEEeCCcchHHHHHHHHHh
Q 044010           49 VVIITGASSGIGEHLAYEYARRGACLALCARREKSLEEVADTARE   93 (248)
Q Consensus        49 ~~lVtGg~~gIG~aia~~l~~~G~~V~l~~r~~~~~~~~~~~l~~   93 (248)
                      ++.|.|+ |-+|..+|..++..|++|.+.+++++.++...+.+++
T Consensus         1 ~V~ViGa-G~mG~~iA~~~a~~G~~V~l~d~~~~~l~~~~~~i~~   44 (180)
T PF02737_consen    1 KVAVIGA-GTMGRGIAALFARAGYEVTLYDRSPEALERARKRIER   44 (180)
T ss_dssp             EEEEES--SHHHHHHHHHHHHTTSEEEEE-SSHHHHHHHHHHHHH
T ss_pred             CEEEEcC-CHHHHHHHHHHHhCCCcEEEEECChHHHHhhhhHHHH
Confidence            3567777 9999999999999999999999999887777665554

1.1.35 from EC) (HCDH) [] is an enzyme involved in fatty acid metabolism, it catalyzes the reduction of 3-hydroxyacyl-CoA to 3-oxoacyl-CoA. Most eukaryotic cells have 2 fatty-acid beta-oxidation systems, one located in mitochondria and the other in peroxisomes. In peroxisomes 3-hydroxyacyl-CoA dehydrogenase forms, with enoyl-CoA hydratase (ECH) and 3,2-trans-enoyl-CoA isomerase (ECI) a multifunctional enzyme where the N-terminal domain bears the hydratase/isomerase activities and the C-terminal domain the dehydrogenase activity. There are two mitochondrial enzymes: one which is monofunctional and the other which is, like its peroxisomal counterpart, multifunctional. In Escherichia coli (gene fadB) and Pseudomonas fragi (gene faoA) HCDH is part of a multifunctional enzyme which also contains an ECH/ECI domain as well as a 3-hydroxybutyryl-CoA epimerase domain []. There are two major regions of similarity in the sequences of proteins of the HCDH family, the first one located in the N-terminal, corresponds to the NAD-binding site, the second one is located in the centre of the sequence. This represents the C-terminal domain which is also found in lambda crystallin. Some proteins include two copies of this domain.; GO: 0003857 3-hydroxyacyl-CoA dehydrogenase activity, 0016491 oxidoreductase activity, 0006631 fatty acid metabolic process, 0055114 oxidation-reduction process; PDB: 3K6J_A 1ZCJ_A 2X58_A 1ZEJ_A 3HDH_B 2WTB_A 1WDL_B 2D3T_B 1WDK_A 1WDM_B ....

>PRK03562 glutathione-regulated potassium-efflux system protein KefC; Provisional

Probab=95.52  E-value=0.23  Score=47.40  Aligned_cols=56  Identities=16%  Similarity=0.277  Sum_probs=40.5

Q ss_pred             CCEEEEcCCCChHHHHHHHHHHHcCCeEEEEeCCcchHHHHHHHHHhhCCCcEEEEEccCCCHH
Q 044010           47 GKVVIITGASSGIGEHLAYEYARRGACLALCARREKSLEEVADTAREIGSPDVITIRADVSKVD  110 (248)
Q Consensus        47 ~k~~lVtGg~~gIG~aia~~l~~~G~~V~l~~r~~~~~~~~~~~l~~~~~~~v~~~~~D~~~~~  110 (248)
                      .+.++|.|. |-+|+.+++.|.++|.++++++.|+++.+...+    .   ....+..|.++.+
T Consensus       400 ~~~vII~G~-Gr~G~~va~~L~~~g~~vvvID~d~~~v~~~~~----~---g~~v~~GDat~~~  455 (621)
T PRK03562        400 QPRVIIAGF-GRFGQIVGRLLLSSGVKMTVLDHDPDHIETLRK----F---GMKVFYGDATRMD  455 (621)
T ss_pred             cCcEEEEec-ChHHHHHHHHHHhCCCCEEEEECCHHHHHHHHh----c---CCeEEEEeCCCHH
Confidence            356777766 789999999999999999999999876655432    1   2234555555543

>PF03446 NAD_binding_2: NAD binding domain of 6-phosphogluconate dehydrogenase; InterPro: IPR006115 6-Phosphogluconate dehydrogenase (1

Probab=95.48  E-value=0.046  Score=42.74  Aligned_cols=83  Identities=13%  Similarity=0.195  Sum_probs=52.9

Q ss_pred             EEEEcCCCChHHHHHHHHHHHcCCeEEEEeCCcchHHHHHHHHHhhCC------CcEEEEEccCCCHHHHHHHHHH--HH
Q 044010           49 VVIITGASSGIGEHLAYEYARRGACLALCARREKSLEEVADTAREIGS------PDVITIRADVSKVDDCRSLVEE--TM  120 (248)
Q Consensus        49 ~~lVtGg~~gIG~aia~~l~~~G~~V~l~~r~~~~~~~~~~~l~~~~~------~~v~~~~~D~~~~~~~~~~~~~--~~  120 (248)
                      ++-+.|- |-+|..+|++|+++|++|.+-+|++++.++..+.-.....      .+..++..=+.+.+++++++..  +.
T Consensus         3 ~Ig~IGl-G~mG~~~a~~L~~~g~~v~~~d~~~~~~~~~~~~g~~~~~s~~e~~~~~dvvi~~v~~~~~v~~v~~~~~i~   81 (163)
T PF03446_consen    3 KIGFIGL-GNMGSAMARNLAKAGYEVTVYDRSPEKAEALAEAGAEVADSPAEAAEQADVVILCVPDDDAVEAVLFGENIL   81 (163)
T ss_dssp             EEEEE---SHHHHHHHHHHHHTTTEEEEEESSHHHHHHHHHTTEEEESSHHHHHHHBSEEEE-SSSHHHHHHHHHCTTHG
T ss_pred             EEEEEch-HHHHHHHHHHHHhcCCeEEeeccchhhhhhhHHhhhhhhhhhhhHhhcccceEeecccchhhhhhhhhhHHh
Confidence            4556655 8999999999999999999999998777766542100000      1234555667777888888876  55


Q ss_pred             hHcCCccEEEEc
Q 044010          121 NHFGRLDHLVNN  132 (248)
Q Consensus       121 ~~~g~id~vv~~  132 (248)
                      ....+=.++|..
T Consensus        82 ~~l~~g~iiid~   93 (163)
T PF03446_consen   82 AGLRPGKIIIDM   93 (163)
T ss_dssp             GGS-TTEEEEE-
T ss_pred             hccccceEEEec
Confidence            544444455444

1.1.44 from EC) (6PGD) is an oxidative carboxylase that catalyses the decarboxylating reduction of 6-phosphogluconate into ribulose 5-phosphate in the presence of NADP. This reaction is a component of the hexose mono-phosphate shunt and pentose phosphate pathways (PPP) [, ]. Prokaryotic and eukaryotic 6PGD are proteins of about 470 amino acids whose sequence are highly conserved []. The protein is a homodimer in which the monomers act independently []: each contains a large, mainly alpha-helical domain and a smaller beta-alpha-beta domain, containing a mixed parallel and anti-parallel 6-stranded beta sheet []. NADP is bound in a cleft in the small domain, the substrate binding in an adjacent pocket []. This family represents the NADP binding domain of 6-phosphogluconate dehydrogenase which adopts a Rossman fold. The C-terminal domain is described in IPR006114 from INTERPRO.; GO: 0004616 phosphogluconate dehydrogenase (decarboxylating) activity, 0006098 pentose-phosphate shunt, 0055114 oxidation-reduction process; PDB: 3AX6_D 3PDU_G 3Q3C_A 3OBB_A 4DLL_B 1PGP_A 1PGN_A 2PGD_A 1PGQ_A 1PGO_A ....

>COG4123 Predicted O-methyltransferase [General function prediction only]

Probab=95.48  E-value=0.12  Score=43.31  Aligned_cols=124  Identities=13%  Similarity=0.101  Sum_probs=80.2

Q ss_pred             CCEEEEcCCC-ChHHHHHHHHHHHcCCeEEEEeCCcchHHHHHHHHHhhC-CCcEEEEEccCCCHHHHHHHHHHHHhHcC
Q 044010           47 GKVVIITGAS-SGIGEHLAYEYARRGACLALCARREKSLEEVADTAREIG-SPDVITIRADVSKVDDCRSLVEETMNHFG  124 (248)
Q Consensus        47 ~k~~lVtGg~-~gIG~aia~~l~~~G~~V~l~~r~~~~~~~~~~~l~~~~-~~~v~~~~~D~~~~~~~~~~~~~~~~~~g  124 (248)
                      +++++=.|++ |.+|..++++.-+  +++..+.+.++..+-+.+.++... ..++.+++.|+.+...-.        .+.
T Consensus        45 ~~~IlDlGaG~G~l~L~la~r~~~--a~I~~VEiq~~~a~~A~~nv~ln~l~~ri~v~~~Di~~~~~~~--------~~~  114 (248)
T COG4123          45 KGRILDLGAGNGALGLLLAQRTEK--AKIVGVEIQEEAAEMAQRNVALNPLEERIQVIEADIKEFLKAL--------VFA  114 (248)
T ss_pred             CCeEEEecCCcCHHHHHHhccCCC--CcEEEEEeCHHHHHHHHHHHHhCcchhceeEehhhHHHhhhcc--------ccc
Confidence            5566666655 6778877776543  789999998877777776666533 357889988886653221        123


Q ss_pred             CccEEEEccccCCcccc-cccCChHHHHHHHHhhhHHHHHHHHHHhhhhhhcCCeEEEEcC
Q 044010          125 RLDHLVNNAGISSVALF-EDIVNITDFKQIMNINFWGSVYTTRFAVPHLRYTKGKIVVLSS  184 (248)
Q Consensus       125 ~id~vv~~ag~~~~~~~-~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~g~iV~isS  184 (248)
                      ++|.+|.|..+.....- ......+........++-..+..+..+   + +.+|.+.++..
T Consensus       115 ~fD~Ii~NPPyf~~~~~~~~~~~~~~Ar~e~~~~le~~i~~a~~~---l-k~~G~l~~V~r  171 (248)
T COG4123         115 SFDLIICNPPYFKQGSRLNENPLRAIARHEITLDLEDLIRAAAKL---L-KPGGRLAFVHR  171 (248)
T ss_pred             ccCEEEeCCCCCCCccccCcChhhhhhhhhhcCCHHHHHHHHHHH---c-cCCCEEEEEec
Confidence            69999999988765543 111123445566666666665555554   3 46788887764

>cd01488 Uba3_RUB Ubiquitin activating enzyme (E1) subunit UBA3

Probab=95.48  E-value=0.13  Score=44.16  Aligned_cols=74  Identities=14%  Similarity=0.230  Sum_probs=46.9

Q ss_pred             EEEcCCCChHHHHHHHHHHHcCC-eEEEEeCCcc-------------------hHHHHHHHHHhhCC-CcEEEEEccCCC
Q 044010           50 VIITGASSGIGEHLAYEYARRGA-CLALCARREK-------------------SLEEVADTAREIGS-PDVITIRADVSK  108 (248)
Q Consensus        50 ~lVtGg~~gIG~aia~~l~~~G~-~V~l~~r~~~-------------------~~~~~~~~l~~~~~-~~v~~~~~D~~~  108 (248)
                      ++|.| .||+|.++++.|+..|. ++.++|.+.-                   +.+.+.+.+++..+ .++..+..++.+
T Consensus         2 VlVVG-aGGlG~eilknLal~Gvg~I~IvD~D~Ve~SNLnRQfLf~~~dIGk~KAevaa~~l~~~np~v~I~~~~~~i~~   80 (291)
T cd01488           2 ILVIG-AGGLGCELLKNLALSGFRNIHVIDMDTIDVSNLNRQFLFREKDIGKPKAEVAAKFVNDRVPGVNVTPHFGKIQD   80 (291)
T ss_pred             EEEEC-CCHHHHHHHHHHHHcCCCeEEEECCCEecccccCcCcccChHHcchHHHHHHHHHHHHHCCCCEEEEEecccCc
Confidence            66776 58999999999999998 8888877432                   44444555555443 244555555554


Q ss_pred             HHHHHHHHHHHHhHcCCccEEEEcc
Q 044010          109 VDDCRSLVEETMNHFGRLDHLVNNA  133 (248)
Q Consensus       109 ~~~~~~~~~~~~~~~g~id~vv~~a  133 (248)
                      .+  .++       +.++|++|.+.
T Consensus        81 ~~--~~f-------~~~fdvVi~al   96 (291)
T cd01488          81 KD--EEF-------YRQFNIIICGL   96 (291)
T ss_pred             hh--HHH-------hcCCCEEEECC
Confidence            21  112       23677777653

UBA3 is part of the heterodimeric activating enzyme (E1), specific for the Rub family of ubiquitin-like proteins (Ubls). E1 enzymes are part of a conjugation cascade to attach Ub or Ubls, covalently to substrate proteins. consisting of activating (E1), conjugating (E2), and/or ligating (E3) enzymes. E1 activates ubiquitin(-like) by C-terminal adenylation, and subsequently forms a highly reactive thioester bond between its catalytic cysteine and Ubls C-terminus. E1 also associates with E2 and promotes ubiquitin transfer to the E2's catalytic cysteine. Post-translational modification by Rub family of ubiquitin-like proteins (Ublps) activates SCF ubiquitin ligases and is involved in cell cycle control, signaling and embryogenesis. UBA3 contains both the nucleotide-binding motif involved in adenylation and the catalytic cysteine involved in the thioester intermediate and Ublp transfer to E2.

>cd00300 LDH_like L-lactate dehydrogenase-like enzymes

Probab=95.46  E-value=0.47  Score=41.01  Aligned_cols=109  Identities=20%  Similarity=0.207  Sum_probs=66.1

Q ss_pred             EEcCCCChHHHHHHHHHHHcC--CeEEEEeCCcchHHHHHHHHHhhCCC--cEEEEEccCCCHHHHHHHHHHHHhHcCCc
Q 044010           51 IITGASSGIGEHLAYEYARRG--ACLALCARREKSLEEVADTAREIGSP--DVITIRADVSKVDDCRSLVEETMNHFGRL  126 (248)
Q Consensus        51 lVtGg~~gIG~aia~~l~~~G--~~V~l~~r~~~~~~~~~~~l~~~~~~--~v~~~~~D~~~~~~~~~~~~~~~~~~g~i  126 (248)
                      .|.|+ |++|.+++..|+.+|  .++++.++++++.+.....+.+....  ......+  ++.           +.+.+-
T Consensus         2 ~iiGa-G~VG~~~a~~l~~~~~~~el~l~D~~~~~~~g~~~DL~~~~~~~~~~~i~~~--~~~-----------~~l~~a   67 (300)
T cd00300           2 TIIGA-GNVGAAVAFALIAKGLASELVLVDVNEEKAKGDALDLSHASAFLATGTIVRG--GDY-----------ADAADA   67 (300)
T ss_pred             EEECC-CHHHHHHHHHHHhcCCCCEEEEEeCCccHHHHHHHhHHHhccccCCCeEEEC--CCH-----------HHhCCC
Confidence            46665 789999999999998  58999999998877777666654321  1122211  221           123479


Q ss_pred             cEEEEccccCCcccccccCChHHHHHHHHhhhHHHHHHHHHHhhhhhh--cCCeEEEEcC
Q 044010          127 DHLVNNAGISSVALFEDIVNITDFKQIMNINFWGSVYTTRFAVPHLRY--TKGKIVVLSS  184 (248)
Q Consensus       127 d~vv~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~--~~g~iV~isS  184 (248)
                      |++|.++|.....   . .+   -.+.+..|+.-    ++.+.+.+.+  .++.++++|.
T Consensus        68 DiVIitag~p~~~---~-~~---R~~l~~~n~~i----~~~~~~~i~~~~p~~~viv~sN  116 (300)
T cd00300          68 DIVVITAGAPRKP---G-ET---RLDLINRNAPI----LRSVITNLKKYGPDAIILVVSN  116 (300)
T ss_pred             CEEEEcCCCCCCC---C-CC---HHHHHHHHHHH----HHHHHHHHHHhCCCeEEEEccC
Confidence            9999999975332   1 12   23334444444    4444444432  2467777774

Members of this subfamily are tetrameric NAD-dependent 2-hydroxycarboxylate dehydrogenases including LDHs, L-2-hydroxyisocaproate dehydrogenases (L-HicDH), and LDH-like malate dehydrogenases (MDH). Dehydrogenases catalyze the conversion of carbonyl compounds to alcohols or amino acids. LDHs catalyze the last step of glycolysis in which pyruvate is converted to L-lactate. Vertebrate LDHs are non-allosteric, but some bacterial LDHs are activated by an allosteric effector such as fructose-1,6-bisphosphate. L-HicDH catalyzes the conversion of a variety of 2-oxo carboxylic acids with medium-sized aliphatic or aromatic side chains. MDH is one of the key enzymes in the citric acid cycle, facilitating both the conversion of malate to oxaloacetate and replenishing levels of oxalacetate by reductive carboxylation of pyruvate. The LDH-like subfamily is part of the NAD(P)-binding Rossmann fold superfamily, which includes a wide variety of prot

>PRK14852 hypothetical protein; Provisional

Probab=95.42  E-value=0.11  Score=51.50  Aligned_cols=82  Identities=20%  Similarity=0.305  Sum_probs=54.7

Q ss_pred             cCCCCCEEEEcCCCChHHHHHHHHHHHcCC-eEEEEeCCc-------------------chHHHHHHHHHhhCC-CcEEE
Q 044010           43 EDVSGKVVIITGASSGIGEHLAYEYARRGA-CLALCARRE-------------------KSLEEVADTAREIGS-PDVIT  101 (248)
Q Consensus        43 ~~~~~k~~lVtGg~~gIG~aia~~l~~~G~-~V~l~~r~~-------------------~~~~~~~~~l~~~~~-~~v~~  101 (248)
                      .++++.+++|.|. ||+|..+++.|+..|. ++.++|.+.                   .|.+.+.+.+++.++ .+++.
T Consensus       328 ~kL~~srVlVvGl-GGlGs~ia~~LAraGVG~I~L~D~D~Ve~SNLNRQ~l~~~~dIG~~Kaevaa~~l~~INP~v~I~~  406 (989)
T PRK14852        328 RRLLRSRVAIAGL-GGVGGIHLMTLARTGIGNFNLADFDAYSPVNLNRQYGASIASFGRGKLDVMTERALSVNPFLDIRS  406 (989)
T ss_pred             HHHhcCcEEEECC-cHHHHHHHHHHHHcCCCeEEEEcCCEecccccccccCCChhhCCChHHHHHHHHHHHHCCCCeEEE
Confidence            4688999999985 8999999999999998 888887743                   245555556665543 24445


Q ss_pred             EEccCCCHHHHHHHHHHHHhHcCCccEEEEcc
Q 044010          102 IRADVSKVDDCRSLVEETMNHFGRLDHLVNNA  133 (248)
Q Consensus       102 ~~~D~~~~~~~~~~~~~~~~~~g~id~vv~~a  133 (248)
                      +...+ +.+.++++++       ++|+||.+.
T Consensus       407 ~~~~I-~~en~~~fl~-------~~DiVVDa~  430 (989)
T PRK14852        407 FPEGV-AAETIDAFLK-------DVDLLVDGI  430 (989)
T ss_pred             EecCC-CHHHHHHHhh-------CCCEEEECC
Confidence            54554 3334444433       466666544

>cd05282 ETR_like 2-enoyl thioester reductase-like

Probab=95.41  E-value=0.096  Score=44.96  Aligned_cols=80  Identities=24%  Similarity=0.238  Sum_probs=51.1

Q ss_pred             CCCCEEEEcCCCChHHHHHHHHHHHcCCeEEEEeCCcchHHHHHHHHHhhCCCcEEEEEccCCCHHHHHHHHHHHHhHcC
Q 044010           45 VSGKVVIITGASSGIGEHLAYEYARRGACLALCARREKSLEEVADTAREIGSPDVITIRADVSKVDDCRSLVEETMNHFG  124 (248)
Q Consensus        45 ~~~k~~lVtGg~~gIG~aia~~l~~~G~~V~l~~r~~~~~~~~~~~l~~~~~~~v~~~~~D~~~~~~~~~~~~~~~~~~g  124 (248)
                      -+|.+++|.|+++++|.++++.+...|++++++.++.++.+.+    ++.+-.    ...|..+....++ +.+.. ...
T Consensus       137 ~~~~~vlI~g~~~~vg~~~~~~a~~~g~~v~~~~~~~~~~~~~----~~~g~~----~~~~~~~~~~~~~-~~~~~-~~~  206 (323)
T cd05282         137 PPGDWVIQNAANSAVGRMLIQLAKLLGFKTINVVRRDEQVEEL----KALGAD----EVIDSSPEDLAQR-VKEAT-GGA  206 (323)
T ss_pred             CCCCEEEEcccccHHHHHHHHHHHHCCCeEEEEecChHHHHHH----HhcCCC----EEecccchhHHHH-HHHHh-cCC
Confidence            3578999999999999999998889999999988887654433    222221    1122223222222 22211 112


Q ss_pred             CccEEEEccc
Q 044010          125 RLDHLVNNAG  134 (248)
Q Consensus       125 ~id~vv~~ag  134 (248)
                      .+|.++.+.|
T Consensus       207 ~~d~vl~~~g  216 (323)
T cd05282         207 GARLALDAVG  216 (323)
T ss_pred             CceEEEECCC
Confidence            6999998876

2-enoyl thioester reductase (ETR) catalyzes the NADPH-dependent conversion of trans-2-enoyl acyl carrier protein/coenzyme A (ACP/CoA) to acyl-(ACP/CoA) in fatty acid synthesis. 2-enoyl thioester reductase activity has been linked in Candida tropicalis as essential in maintaining mitiochondrial respiratory function. This ETR family is a part of the medium chain dehydrogenase/reductase family, but lack the zinc coordination sites characteristic of the alcohol dehydrogenases in this family. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde and NADH, while in yeast and some other microorganisms ADH catalyzes the conversion acetaldehyde to ethanol in alcoholic fermentation. ADH is a member of the medium chain alcohol dehydrogenase family (MDR), which has a NAD(P)(H)-binding domain in a Rossman

>TIGR01772 MDH_euk_gproteo malate dehydrogenase, NAD-dependent

Probab=95.41  E-value=0.19  Score=43.74  Aligned_cols=115  Identities=20%  Similarity=0.185  Sum_probs=64.8

Q ss_pred             EEEEcCCCChHHHHHHHHHHHcCC--eEEEEeCCcchHHHHHHHHHhhCCCcEEEEEccCCCHHHHHHHHHHHHhHcCCc
Q 044010           49 VVIITGASSGIGEHLAYEYARRGA--CLALCARREKSLEEVADTAREIGSPDVITIRADVSKVDDCRSLVEETMNHFGRL  126 (248)
Q Consensus        49 ~~lVtGg~~gIG~aia~~l~~~G~--~V~l~~r~~~~~~~~~~~l~~~~~~~v~~~~~D~~~~~~~~~~~~~~~~~~g~i  126 (248)
                      ++.|+|++|.+|.++|..|+.+|.  ++++.++++..  .....+..... ...+..+.- + ++       ..+.+.+-
T Consensus         1 KV~IiGaaG~VG~~~a~~l~~~~~~~elvL~Di~~a~--g~a~DL~~~~~-~~~i~~~~~-~-~~-------~~~~~~da   68 (312)
T TIGR01772         1 KVAVLGAAGGIGQPLSLLLKLQPYVSELSLYDIAGAA--GVAADLSHIPT-AASVKGFSG-E-EG-------LENALKGA   68 (312)
T ss_pred             CEEEECCCCHHHHHHHHHHHhCCCCcEEEEecCCCCc--EEEchhhcCCc-CceEEEecC-C-Cc-------hHHHcCCC
Confidence            367899999999999999998875  79999997621  11111221111 111111000 0 01       12334589


Q ss_pred             cEEEEccccCCcccccccCChHHHHHHHHhhhHHHHHHHHHHhhhhhh--cCCeEEEEcCcc
Q 044010          127 DHLVNNAGISSVALFEDIVNITDFKQIMNINFWGSVYTTRFAVPHLRY--TKGKIVVLSSAA  186 (248)
Q Consensus       127 d~vv~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~--~~g~iV~isS~~  186 (248)
                      |++|.+||.....   .    ++-++.+..|+.-    ++...+.+.+  .++.++++|.-.
T Consensus        69 DivvitaG~~~~~---g----~~R~dll~~N~~I----~~~i~~~i~~~~p~~iiivvsNPv  119 (312)
T TIGR01772        69 DVVVIPAGVPRKP---G----MTRDDLFNVNAGI----VKDLVAAVAESCPKAMILVITNPV  119 (312)
T ss_pred             CEEEEeCCCCCCC---C----ccHHHHHHHhHHH----HHHHHHHHHHhCCCeEEEEecCch
Confidence            9999999975321   1    2234456666664    4444444432  236777777544

Although malate dehydrogenases have in some cases been mistaken for lactate dehydrogenases due to the similarity of these two substrates and the apparent ease with which evolution can toggle these activities, critical residues have been identified which can discriminate between the two activities. At the time of the creation of this model no hits above the trusted cutoff contained critical residues typical of lactate dehydrogenases.

>cd08289 MDR_yhfp_like Yhfp putative quinone oxidoreductases

Probab=95.41  E-value=0.1  Score=44.94  Aligned_cols=42  Identities=19%  Similarity=0.299  Sum_probs=35.6

Q ss_pred             CCCEEEEcCCCChHHHHHHHHHHHcCCeEEEEeCCcchHHHH
Q 044010           46 SGKVVIITGASSGIGEHLAYEYARRGACLALCARREKSLEEV   87 (248)
Q Consensus        46 ~~k~~lVtGg~~gIG~aia~~l~~~G~~V~l~~r~~~~~~~~   87 (248)
                      .+++++|.|+++++|.++++.....|++|+.+++++++.+..
T Consensus       146 ~~~~vlI~g~~g~vg~~~~~~a~~~g~~v~~~~~~~~~~~~~  187 (326)
T cd08289         146 EQGPVLVTGATGGVGSLAVSILAKLGYEVVASTGKADAADYL  187 (326)
T ss_pred             CCCEEEEEcCCchHHHHHHHHHHHCCCeEEEEecCHHHHHHH
Confidence            468999999999999999888888999999998887654443

yhfp putative quinone oxidoreductases (QOR). QOR catalyzes the conversion of a quinone + NAD(P)H to a hydroquinone + NAD(P)+. Quinones are cyclic diones derived from aromatic compounds. Membrane bound QOR actin the respiratory chains of bacteria and mitochondria, while soluble QOR acts to protect from toxic quinones (e.g. DT-diaphorase) or as a soluble eye-lens protein in some vertebrates (e.g. zeta-crystalin). QOR reduces quinones through a semi-quinone intermediate via a NAD(P)H-dependent single electron transfer. QOR is a member of the medium chain dehydrogenase/reductase family, but lacks the zinc-binding sites of the prototypical alcohol dehydrogenases of this group. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde and NADH, while in yeast and some other microorganisms ADH

>cd01486 Apg7 Apg7 is an E1-like protein, that activates two different ubiquitin-like proteins, Apg12 and Apg8, and assigns them to specific E2 enzymes, Apg10 and Apg3, respectively

Probab=95.39  E-value=0.11  Score=44.75  Aligned_cols=31  Identities=16%  Similarity=0.326  Sum_probs=26.2

Q ss_pred             EEEcCCCChHHHHHHHHHHHcCC-eEEEEeCCc
Q 044010           50 VIITGASSGIGEHLAYEYARRGA-CLALCARRE   81 (248)
Q Consensus        50 ~lVtGg~~gIG~aia~~l~~~G~-~V~l~~r~~   81 (248)
                      ++|.|+ ||+|..+|+.|+..|. ++.+++.+.
T Consensus         2 VLIvGa-GGLGs~vA~~La~aGVg~ItlvD~D~   33 (307)
T cd01486           2 CLLLGA-GTLGCNVARNLLGWGVRHITFVDSGK   33 (307)
T ss_pred             EEEECC-CHHHHHHHHHHHHcCCCeEEEECCCE
Confidence            566765 8999999999999998 888888754

This leads to the covalent conjugation of Apg8 with phosphatidylethanolamine, an important step in autophagy. Autophagy is a dynamic membrane phenomenon for bulk protein degradation in the lysosome/vacuole.

>cd08250 Mgc45594_like Mgc45594 gene product and other MDR family members

Probab=95.36  E-value=0.094  Score=45.29  Aligned_cols=79  Identities=16%  Similarity=0.267  Sum_probs=50.7

Q ss_pred             CCCCEEEEcCCCChHHHHHHHHHHHcCCeEEEEeCCcchHHHHHHHHHhhCCCcEEEEEccCCCHHHHHHHHHHHHhHcC
Q 044010           45 VSGKVVIITGASSGIGEHLAYEYARRGACLALCARREKSLEEVADTAREIGSPDVITIRADVSKVDDCRSLVEETMNHFG  124 (248)
Q Consensus        45 ~~~k~~lVtGg~~gIG~aia~~l~~~G~~V~l~~r~~~~~~~~~~~l~~~~~~~v~~~~~D~~~~~~~~~~~~~~~~~~g  124 (248)
                      -+|.+++|.|+++++|.++++.....|++|+.+.++.++.+..    ++.+...  +  .|..+. +..+.+.+...  +
T Consensus       138 ~~~~~vlI~ga~g~ig~~~~~~a~~~g~~v~~~~~~~~~~~~~----~~~g~~~--v--~~~~~~-~~~~~~~~~~~--~  206 (329)
T cd08250         138 KSGETVLVTAAAGGTGQFAVQLAKLAGCHVIGTCSSDEKAEFL----KSLGCDR--P--INYKTE-DLGEVLKKEYP--K  206 (329)
T ss_pred             CCCCEEEEEeCccHHHHHHHHHHHHcCCeEEEEeCcHHHHHHH----HHcCCce--E--EeCCCc-cHHHHHHHhcC--C
Confidence            3578999999999999998888888899999988876554433    2223211  1  222222 23333333222  3


Q ss_pred             CccEEEEccc
Q 044010          125 RLDHLVNNAG  134 (248)
Q Consensus       125 ~id~vv~~ag  134 (248)
                      .+|.++++.|
T Consensus       207 ~vd~v~~~~g  216 (329)
T cd08250         207 GVDVVYESVG  216 (329)
T ss_pred             CCeEEEECCc
Confidence            6999998866

Includes Human Mgc45594 gene product of undetermined function. The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P) binding-Rossmann fold domain of a beta-alpha form and an N-terminal catalytic domain with distant homology to GroES.

>PLN02740 Alcohol dehydrogenase-like

Probab=95.33  E-value=0.1  Score=46.41  Aligned_cols=79  Identities=22%  Similarity=0.238  Sum_probs=51.2

Q ss_pred             CCCEEEEcCCCChHHHHHHHHHHHcCC-eEEEEeCCcchHHHHHHHHHhhCCCcEEEEEccCCCH-HHHHHHHHHHHhHc
Q 044010           46 SGKVVIITGASSGIGEHLAYEYARRGA-CLALCARREKSLEEVADTAREIGSPDVITIRADVSKV-DDCRSLVEETMNHF  123 (248)
Q Consensus        46 ~~k~~lVtGg~~gIG~aia~~l~~~G~-~V~l~~r~~~~~~~~~~~l~~~~~~~v~~~~~D~~~~-~~~~~~~~~~~~~~  123 (248)
                      +|++++|.|+ |++|...++.+...|+ +|+.+++++++.+.+    ++.+. . .+  .|..+. ++..+.+.++..  
T Consensus       198 ~g~~VlV~G~-G~vG~~a~q~ak~~G~~~Vi~~~~~~~r~~~a----~~~Ga-~-~~--i~~~~~~~~~~~~v~~~~~--  266 (381)
T PLN02740        198 AGSSVAIFGL-GAVGLAVAEGARARGASKIIGVDINPEKFEKG----KEMGI-T-DF--INPKDSDKPVHERIREMTG--  266 (381)
T ss_pred             CCCEEEEECC-CHHHHHHHHHHHHCCCCcEEEEcCChHHHHHH----HHcCC-c-EE--EecccccchHHHHHHHHhC--
Confidence            5889999985 9999999888778898 699998887665544    22232 1 12  243332 223333333322  


Q ss_pred             CCccEEEEcccc
Q 044010          124 GRLDHLVNNAGI  135 (248)
Q Consensus       124 g~id~vv~~ag~  135 (248)
                      +.+|+++.++|.
T Consensus       267 ~g~dvvid~~G~  278 (381)
T PLN02740        267 GGVDYSFECAGN  278 (381)
T ss_pred             CCCCEEEECCCC
Confidence            269999999884

>cd05191 NAD_bind_amino_acid_DH NAD(P) binding domain of amino acid dehydrogenase-like proteins

Probab=95.33  E-value=0.1  Score=36.15  Aligned_cols=36  Identities=33%  Similarity=0.628  Sum_probs=31.7

Q ss_pred             cCCCCCEEEEcCCCChHHHHHHHHHHHc-CCeEEEEeC
Q 044010           43 EDVSGKVVIITGASSGIGEHLAYEYARR-GACLALCAR   79 (248)
Q Consensus        43 ~~~~~k~~lVtGg~~gIG~aia~~l~~~-G~~V~l~~r   79 (248)
                      .++++|+++|.|. |+.|..++..|.+. +.+|.+.+|
T Consensus        19 ~~~~~~~v~i~G~-G~~g~~~a~~l~~~~~~~v~v~~r   55 (86)
T cd05191          19 KSLKGKTVVVLGA-GEVGKGIAKLLADEGGKKVVLCDR   55 (86)
T ss_pred             CCCCCCEEEEECC-CHHHHHHHHHHHHcCCCEEEEEcC
Confidence            5789999999999 99999999999998 457888776

Amino acid dehydrogenase(DH)-like NAD(P)-binding domains are members of the Rossmann fold superfamily and are found in glutamate, leucine, and phenylalanine DHs (DHs), methylene tetrahydrofolate DH, methylene-tetrahydromethanopterin DH, methylene-tetrahydropholate DH/cyclohydrolase, Shikimate DH-like proteins, malate oxidoreductases, and glutamyl tRNA reductase. Amino acid DHs catalyze the deamination of amino acids to keto acids with NAD(P)+ as a cofactor. The NAD(P)-binding Rossmann fold superfamily includes a wide variety of protein families including NAD(P)- binding domains of alcohol DHs, tyrosine-dependent oxidoreductases, glyceraldehyde-3-phosphate DH, lactate/malate DHs, formate/glycerate DHs, siroheme synthases, 6-phosphogluconate DH, amino acid DHs, repressor rex, NAD-binding potassium channel domain, CoA-binding, and ornithine cyclodeaminase-like domains. These domains have an al

>PTZ00354 alcohol dehydrogenase; Provisional

Probab=95.33  E-value=0.12  Score=44.60  Aligned_cols=41  Identities=24%  Similarity=0.388  Sum_probs=34.7

Q ss_pred             CCCEEEEcCCCChHHHHHHHHHHHcCCeEEEEeCCcchHHH
Q 044010           46 SGKVVIITGASSGIGEHLAYEYARRGACLALCARREKSLEE   86 (248)
Q Consensus        46 ~~k~~lVtGg~~gIG~aia~~l~~~G~~V~l~~r~~~~~~~   86 (248)
                      +|.+++|.|+++++|.++++.+...|++++++.++.++.+.
T Consensus       140 ~~~~vlI~ga~g~~g~~~~~~a~~~g~~v~~~~~~~~~~~~  180 (334)
T PTZ00354        140 KGQSVLIHAGASGVGTAAAQLAEKYGAATIITTSSEEKVDF  180 (334)
T ss_pred             CCCEEEEEcCCchHHHHHHHHHHHcCCEEEEEeCCHHHHHH
Confidence            57899999999999999999888999998888887655443

>PRK14194 bifunctional 5,10-methylene-tetrahydrofolate dehydrogenase/ 5,10-methylene-tetrahydrofolate cyclohydrolase; Provisional

Probab=95.33  E-value=0.056  Score=46.58  Aligned_cols=79  Identities=16%  Similarity=0.212  Sum_probs=53.5

Q ss_pred             cCCCCCEEEEcCCCChHHHHHHHHHHHcCCeEEEEeCCcchHHHHHHHHHhhCCCcEEEEEccCCCHHHHHHHHHHHHhH
Q 044010           43 EDVSGKVVIITGASSGIGEHLAYEYARRGACLALCARREKSLEEVADTAREIGSPDVITIRADVSKVDDCRSLVEETMNH  122 (248)
Q Consensus        43 ~~~~~k~~lVtGg~~gIG~aia~~l~~~G~~V~l~~r~~~~~~~~~~~l~~~~~~~v~~~~~D~~~~~~~~~~~~~~~~~  122 (248)
                      -+++||++.|.|.++-+|+.++..|+++|++|.+..|+....++..+        +..++..-+.+.+.+.+.+      
T Consensus       155 i~l~Gk~V~vIG~s~ivG~PmA~~L~~~gatVtv~~~~t~~l~e~~~--------~ADIVIsavg~~~~v~~~~------  220 (301)
T PRK14194        155 GDLTGKHAVVIGRSNIVGKPMAALLLQAHCSVTVVHSRSTDAKALCR--------QADIVVAAVGRPRLIDADW------  220 (301)
T ss_pred             CCCCCCEEEEECCCCccHHHHHHHHHHCCCEEEEECCCCCCHHHHHh--------cCCEEEEecCChhcccHhh------
Confidence            48999999999999999999999999999999999776553333222        2233334444554444433      


Q ss_pred             cCCccEEEEccccC
Q 044010          123 FGRLDHLVNNAGIS  136 (248)
Q Consensus       123 ~g~id~vv~~ag~~  136 (248)
                       -+...+|-..|..
T Consensus       221 -ik~GaiVIDvgin  233 (301)
T PRK14194        221 -LKPGAVVIDVGIN  233 (301)
T ss_pred             -ccCCcEEEEeccc
Confidence             1444555556654

>COG0039 Mdh Malate/lactate dehydrogenases [Energy production and conversion]

Probab=95.32  E-value=0.24  Score=42.92  Aligned_cols=115  Identities=19%  Similarity=0.204  Sum_probs=68.1

Q ss_pred             CEEEEcCCCChHHHHHHHHHHHcCC--eEEEEeCCcchHHHHHHHHHhhCCC--cEEEEEccCCCHHHHHHHHHHHHhHc
Q 044010           48 KVVIITGASSGIGEHLAYEYARRGA--CLALCARREKSLEEVADTAREIGSP--DVITIRADVSKVDDCRSLVEETMNHF  123 (248)
Q Consensus        48 k~~lVtGg~~gIG~aia~~l~~~G~--~V~l~~r~~~~~~~~~~~l~~~~~~--~v~~~~~D~~~~~~~~~~~~~~~~~~  123 (248)
                      +++.|+|+ |++|.++|..|+.++.  ++++.+.+++..+.....+......  .-..+..| .+.           +.+
T Consensus         1 ~KVaviGa-G~VG~s~a~~l~~~~~~~el~LiDi~~~~~~G~a~DL~~~~~~~~~~~~i~~~-~~y-----------~~~   67 (313)
T COG0039           1 MKVAVIGA-GNVGSSLAFLLLLQGLGSELVLIDINEEKAEGVALDLSHAAAPLGSDVKITGD-GDY-----------EDL   67 (313)
T ss_pred             CeEEEECC-ChHHHHHHHHHhcccccceEEEEEcccccccchhcchhhcchhccCceEEecC-CCh-----------hhh
Confidence            35778999 9999999999988764  8999999977666555555433210  00122222 222           222


Q ss_pred             CCccEEEEccccCCcccccccCChHHHHHHHHhhhHHHHHHHHHHhhhhhhcCCeEEEEcC
Q 044010          124 GRLDHLVNNAGISSVALFEDIVNITDFKQIMNINFWGSVYTTRFAVPHLRYTKGKIVVLSS  184 (248)
Q Consensus       124 g~id~vv~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~g~iV~isS  184 (248)
                      .+-|++|-.||......    .+   -.+.++.|..-.-.+.+.+...-  .++.++.+|-
T Consensus        68 ~~aDiVvitAG~prKpG----mt---R~DLl~~Na~I~~~i~~~i~~~~--~d~ivlVvtN  119 (313)
T COG0039          68 KGADIVVITAGVPRKPG----MT---RLDLLEKNAKIVKDIAKAIAKYA--PDAIVLVVTN  119 (313)
T ss_pred             cCCCEEEEeCCCCCCCC----CC---HHHHHHhhHHHHHHHHHHHHhhC--CCeEEEEecC
Confidence            47999999999764322    12   23455556655544555443332  1355555553

>PRK03659 glutathione-regulated potassium-efflux system protein KefB; Provisional

Probab=95.31  E-value=0.32  Score=46.27  Aligned_cols=58  Identities=14%  Similarity=0.165  Sum_probs=42.5

Q ss_pred             CEEEEcCCCChHHHHHHHHHHHcCCeEEEEeCCcchHHHHHHHHHhhCCCcEEEEEccCCCHHHHH
Q 044010           48 KVVIITGASSGIGEHLAYEYARRGACLALCARREKSLEEVADTAREIGSPDVITIRADVSKVDDCR  113 (248)
Q Consensus        48 k~~lVtGg~~gIG~aia~~l~~~G~~V~l~~r~~~~~~~~~~~l~~~~~~~v~~~~~D~~~~~~~~  113 (248)
                      ..++|.|. |.+|+.+++.|.++|.++++++.|++..+...    +.   ....+..|.++++.++
T Consensus       401 ~~vII~G~-Gr~G~~va~~L~~~g~~vvvID~d~~~v~~~~----~~---g~~v~~GDat~~~~L~  458 (601)
T PRK03659        401 PQVIIVGF-GRFGQVIGRLLMANKMRITVLERDISAVNLMR----KY---GYKVYYGDATQLELLR  458 (601)
T ss_pred             CCEEEecC-chHHHHHHHHHHhCCCCEEEEECCHHHHHHHH----hC---CCeEEEeeCCCHHHHH
Confidence            46777764 88999999999999999999999987655443    22   2345667777765443

>PRK12480 D-lactate dehydrogenase; Provisional

Probab=95.29  E-value=0.25  Score=43.36  Aligned_cols=91  Identities=21%  Similarity=0.278  Sum_probs=56.3

Q ss_pred             cCCCCCEEEEcCCCChHHHHHHHHHHHcCCeEEEEeCCcchHHHHHH---HHHh-hCCCcEEEEEccCCCHHHHHHHHHH
Q 044010           43 EDVSGKVVIITGASSGIGEHLAYEYARRGACLALCARREKSLEEVAD---TARE-IGSPDVITIRADVSKVDDCRSLVEE  118 (248)
Q Consensus        43 ~~~~~k~~lVtGg~~gIG~aia~~l~~~G~~V~l~~r~~~~~~~~~~---~l~~-~~~~~v~~~~~D~~~~~~~~~~~~~  118 (248)
                      ..++|+++.|.|. |.||.++|+.|...|++|+..+|+++......+   .+.+ ....++.++.+-.+.. ....+-++
T Consensus       142 ~~l~g~~VgIIG~-G~IG~~vA~~L~~~G~~V~~~d~~~~~~~~~~~~~~~l~ell~~aDiVil~lP~t~~-t~~li~~~  219 (330)
T PRK12480        142 KPVKNMTVAIIGT-GRIGAATAKIYAGFGATITAYDAYPNKDLDFLTYKDSVKEAIKDADIISLHVPANKE-SYHLFDKA  219 (330)
T ss_pred             cccCCCEEEEECC-CHHHHHHHHHHHhCCCEEEEEeCChhHhhhhhhccCCHHHHHhcCCEEEEeCCCcHH-HHHHHhHH
Confidence            4689999999976 889999999999999999999987653222111   1111 1233566666665543 22222233


Q ss_pred             HHhHcCCccEEEEccccC
Q 044010          119 TMNHFGRLDHLVNNAGIS  136 (248)
Q Consensus       119 ~~~~~g~id~vv~~ag~~  136 (248)
                      ..+.. +.+.++-|+|..
T Consensus       220 ~l~~m-k~gavlIN~aRG  236 (330)
T PRK12480        220 MFDHV-KKGAILVNAARG  236 (330)
T ss_pred             HHhcC-CCCcEEEEcCCc
Confidence            33333 456666666644

>cd08301 alcohol_DH_plants Plant alcohol dehydrogenase

Probab=95.29  E-value=0.12  Score=45.73  Aligned_cols=80  Identities=19%  Similarity=0.234  Sum_probs=51.5

Q ss_pred             CCCCEEEEcCCCChHHHHHHHHHHHcCC-eEEEEeCCcchHHHHHHHHHhhCCCcEEEEEccCCCH-HHHHHHHHHHHhH
Q 044010           45 VSGKVVIITGASSGIGEHLAYEYARRGA-CLALCARREKSLEEVADTAREIGSPDVITIRADVSKV-DDCRSLVEETMNH  122 (248)
Q Consensus        45 ~~~k~~lVtGg~~gIG~aia~~l~~~G~-~V~l~~r~~~~~~~~~~~l~~~~~~~v~~~~~D~~~~-~~~~~~~~~~~~~  122 (248)
                      -+|.+++|.|+ +++|...++.+...|+ +|+.+++++++.+.+    ++.+. .   ...|..+. +++.+.+.++.. 
T Consensus       186 ~~g~~VlV~G~-g~vG~~a~q~ak~~G~~~vi~~~~~~~~~~~~----~~~Ga-~---~~i~~~~~~~~~~~~v~~~~~-  255 (369)
T cd08301         186 KKGSTVAIFGL-GAVGLAVAEGARIRGASRIIGVDLNPSKFEQA----KKFGV-T---EFVNPKDHDKPVQEVIAEMTG-  255 (369)
T ss_pred             CCCCEEEEECC-CHHHHHHHHHHHHcCCCeEEEEcCCHHHHHHH----HHcCC-c---eEEcccccchhHHHHHHHHhC-
Confidence            36889999975 8999998887777898 799998887654433    22332 1   11233321 234444444332 


Q ss_pred             cCCccEEEEcccc
Q 044010          123 FGRLDHLVNNAGI  135 (248)
Q Consensus       123 ~g~id~vv~~ag~  135 (248)
                       +.+|+++.+.|.
T Consensus       256 -~~~d~vid~~G~  267 (369)
T cd08301         256 -GGVDYSFECTGN  267 (369)
T ss_pred             -CCCCEEEECCCC
Confidence             369999998763

NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes or ketones. Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde and NADH, while in yeast and some other microorganisms ADH catalyzes the conversion acetaldehyde to ethanol in alcoholic fermentation. There are 7 vertebrate ADH 7 classes, 6 of which have been identified in humans. Class III, glutathione-dependent formaldehyde dehydrogenase, has been identified as the primordial form and exists in diverse species, including plants, micro-organisms, vertebrates, and invertebrates. Class I, typified by liver dehydrogenase, is an evolving form. Gene duplication and functional specialization of ADH into ADH classes and subclasses created numerous forms in vertebrates. For example, the A, B and C (formerly alpha, beta, gamma) human class I subunits have high overall structural similarity, but differ in the

>PLN02586 probable cinnamyl alcohol dehydrogenase

Probab=95.26  E-value=0.12  Score=45.62  Aligned_cols=74  Identities=15%  Similarity=0.266  Sum_probs=46.9

Q ss_pred             CCCEEEEcCCCChHHHHHHHHHHHcCCeEEEEeCCcchHHHHHHHHHhhCCCcEEEEEccCCCHHHHHHHHHHHHhHcCC
Q 044010           46 SGKVVIITGASSGIGEHLAYEYARRGACLALCARREKSLEEVADTAREIGSPDVITIRADVSKVDDCRSLVEETMNHFGR  125 (248)
Q Consensus        46 ~~k~~lVtGg~~gIG~aia~~l~~~G~~V~l~~r~~~~~~~~~~~l~~~~~~~v~~~~~D~~~~~~~~~~~~~~~~~~g~  125 (248)
                      .|++++|.|+ |++|..+++.+...|++|++++.+.++.....++   .+- .   ...|..+.+.+.       +..+.
T Consensus       183 ~g~~VlV~G~-G~vG~~avq~Ak~~Ga~vi~~~~~~~~~~~~~~~---~Ga-~---~vi~~~~~~~~~-------~~~~~  247 (360)
T PLN02586        183 PGKHLGVAGL-GGLGHVAVKIGKAFGLKVTVISSSSNKEDEAINR---LGA-D---SFLVSTDPEKMK-------AAIGT  247 (360)
T ss_pred             CCCEEEEECC-CHHHHHHHHHHHHCCCEEEEEeCCcchhhhHHHh---CCC-c---EEEcCCCHHHHH-------hhcCC
Confidence            6889999664 8999999888778899988887776544333222   222 1   112333332222       22246


Q ss_pred             ccEEEEccc
Q 044010          126 LDHLVNNAG  134 (248)
Q Consensus       126 id~vv~~ag  134 (248)
                      +|+++.++|
T Consensus       248 ~D~vid~~g  256 (360)
T PLN02586        248 MDYIIDTVS  256 (360)
T ss_pred             CCEEEECCC
Confidence            899998887

>KOG0023 consensus Alcohol dehydrogenase, class V [Secondary metabolites biosynthesis, transport and catabolism]

Probab=95.23  E-value=0.13  Score=44.39  Aligned_cols=73  Identities=25%  Similarity=0.414  Sum_probs=48.8

Q ss_pred             CCCEEEEcCCCChHHHHHHHHHHH-cCCeEEEEeCCcchHHHHHHHHHhhCCCcEEEEEccCC-CHHHHHHHHHHHHhHc
Q 044010           46 SGKVVIITGASSGIGEHLAYEYAR-RGACLALCARREKSLEEVADTAREIGSPDVITIRADVS-KVDDCRSLVEETMNHF  123 (248)
Q Consensus        46 ~~k~~lVtGg~~gIG~aia~~l~~-~G~~V~l~~r~~~~~~~~~~~l~~~~~~~v~~~~~D~~-~~~~~~~~~~~~~~~~  123 (248)
                      .|+++-|+|.+| +|. ++-++++ -|++|+++++...+.+++.+.+   +. .  .+ +|.+ |.+.++++.+.     
T Consensus       181 pG~~vgI~GlGG-LGh-~aVq~AKAMG~rV~vis~~~~kkeea~~~L---GA-d--~f-v~~~~d~d~~~~~~~~-----  246 (360)
T KOG0023|consen  181 PGKWVGIVGLGG-LGH-MAVQYAKAMGMRVTVISTSSKKKEEAIKSL---GA-D--VF-VDSTEDPDIMKAIMKT-----  246 (360)
T ss_pred             CCcEEEEecCcc-cch-HHHHHHHHhCcEEEEEeCCchhHHHHHHhc---Cc-c--ee-EEecCCHHHHHHHHHh-----
Confidence            899999999977 885 4555665 5999999999887666665554   32 2  22 4566 66666666553     


Q ss_pred             CCccEEEEccc
Q 044010          124 GRLDHLVNNAG  134 (248)
Q Consensus       124 g~id~vv~~ag  134 (248)
                        .|.+++++.
T Consensus       247 --~dg~~~~v~  255 (360)
T KOG0023|consen  247 --TDGGIDTVS  255 (360)
T ss_pred             --hcCcceeee
Confidence              455555543

>PLN02306 hydroxypyruvate reductase

Probab=95.22  E-value=0.15  Score=45.75  Aligned_cols=39  Identities=21%  Similarity=0.152  Sum_probs=33.6

Q ss_pred             cCCCCCEEEEcCCCChHHHHHHHHHH-HcCCeEEEEeCCcc
Q 044010           43 EDVSGKVVIITGASSGIGEHLAYEYA-RRGACLALCARREK   82 (248)
Q Consensus        43 ~~~~~k~~lVtGg~~gIG~aia~~l~-~~G~~V~l~~r~~~   82 (248)
                      .++.||++.|.|- |.||+++|+++. ..|++|+..++...
T Consensus       161 ~~L~gktvGIiG~-G~IG~~vA~~l~~~fGm~V~~~d~~~~  200 (386)
T PLN02306        161 NLLKGQTVGVIGA-GRIGSAYARMMVEGFKMNLIYYDLYQS  200 (386)
T ss_pred             cCCCCCEEEEECC-CHHHHHHHHHHHhcCCCEEEEECCCCc
Confidence            4689999999976 899999999986 67999999888653

>PF03807 F420_oxidored: NADP oxidoreductase coenzyme F420-dependent; InterPro: IPR004455 The function of F420-dependent NADP reductase is the transfer of electrons from reduced coenzyme F420 into an electron transport chain

Probab=95.19  E-value=0.055  Score=38.04  Aligned_cols=37  Identities=19%  Similarity=0.276  Sum_probs=31.0

Q ss_pred             CCChHHHHHHHHHHHcC---CeEEEE-eCCcchHHHHHHHH
Q 044010           55 ASSGIGEHLAYEYARRG---ACLALC-ARREKSLEEVADTA   91 (248)
Q Consensus        55 g~~gIG~aia~~l~~~G---~~V~l~-~r~~~~~~~~~~~l   91 (248)
                      |+|.+|.++++.|++.|   .+|.+. +|++++.++..++.
T Consensus         6 G~G~mg~al~~~l~~~g~~~~~v~~~~~r~~~~~~~~~~~~   46 (96)
T PF03807_consen    6 GAGNMGSALARGLLASGIKPHEVIIVSSRSPEKAAELAKEY   46 (96)
T ss_dssp             STSHHHHHHHHHHHHTTS-GGEEEEEEESSHHHHHHHHHHC
T ss_pred             CCCHHHHHHHHHHHHCCCCceeEEeeccCcHHHHHHHHHhh
Confidence            67999999999999999   899966 89888777665544

It catalyses the reduction of F420 with NADP(+) and the reduction of NADP(+) with F420H(2).; GO: 0016491 oxidoreductase activity, 0055114 oxidation-reduction process; PDB: 2IZZ_B 2GR9_B 2GRA_B 2GER_C 2AMF_E 2AHR_C 2VQ3_B 2VNS_B 2RCY_D 2YJZ_D ....

>COG1179 Dinucleotide-utilizing enzymes involved in molybdopterin and thiamine biosynthesis family 1 [Coenzyme metabolism]

Probab=95.19  E-value=0.27  Score=40.93  Aligned_cols=141  Identities=16%  Similarity=0.222  Sum_probs=83.1

Q ss_pred             ccCCCCCEEEEcCCCChHHHHHHHHHHHcCC-eEEEEeCCcc-------------------hHHHHHHHHHhhCCCcEEE
Q 044010           42 SEDVSGKVVIITGASSGIGEHLAYEYARRGA-CLALCARREK-------------------SLEEVADTAREIGSPDVIT  101 (248)
Q Consensus        42 ~~~~~~k~~lVtGg~~gIG~aia~~l~~~G~-~V~l~~r~~~-------------------~~~~~~~~l~~~~~~~v~~  101 (248)
                      .+.+++.+++|.|. ||.|...++.|+..|. ++.+++-+.-                   +.+...+.+++..+ .+++
T Consensus        25 lekl~~~~V~VvGi-GGVGSw~veALaRsGig~itlID~D~v~vTN~NRQi~A~~~~iGk~Kv~vm~eri~~InP-~c~V  102 (263)
T COG1179          25 LEKLKQAHVCVVGI-GGVGSWAVEALARSGIGRITLIDMDDVCVTNTNRQIHALLGDIGKPKVEVMKERIKQINP-ECEV  102 (263)
T ss_pred             HHHHhhCcEEEEec-CchhHHHHHHHHHcCCCeEEEEecccccccccchhhHhhhhhcccHHHHHHHHHHHhhCC-CceE
Confidence            35789999999987 8999999999999998 8888877541                   23333344444433 2322


Q ss_pred             -EEccCCCHHHHHHHHHHHHhHcCCccEEEEccccCCcccccccCChHHHHHHHHhhhHHHHHHHHHHhhhhhhcCCeEE
Q 044010          102 -IRADVSKVDDCRSLVEETMNHFGRLDHLVNNAGISSVALFEDIVNITDFKQIMNINFWGSVYTTRFAVPHLRYTKGKIV  180 (248)
Q Consensus       102 -~~~D~~~~~~~~~~~~~~~~~~g~id~vv~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~g~iV  180 (248)
                       ..-|+-.++.+++++..      .+|++|-+.-                      |+..-..|+..+.    +.+=.+|
T Consensus       103 ~~~~~f~t~en~~~~~~~------~~DyvIDaiD----------------------~v~~Kv~Li~~c~----~~ki~vI  150 (263)
T COG1179         103 TAINDFITEENLEDLLSK------GFDYVIDAID----------------------SVRAKVALIAYCR----RNKIPVI  150 (263)
T ss_pred             eehHhhhCHhHHHHHhcC------CCCEEEEchh----------------------hhHHHHHHHHHHH----HcCCCEE
Confidence             22344445555555432      5777765532                      1122223333332    2222333


Q ss_pred             EEcCccccccCCCCccchHHHHHHHHHHHHHHHHhC
Q 044010          181 VLSSAASWLTAPRMSFYNASKAALVLFFETLRVELG  216 (248)
Q Consensus       181 ~isS~~~~~~~~~~~~Y~~sKaal~~l~~~la~~~~  216 (248)
                      .....++.......-.-..||.-..-|++-++++++
T Consensus       151 ss~Gag~k~DPTri~v~DiskT~~DPLa~~vR~~LR  186 (263)
T COG1179         151 SSMGAGGKLDPTRIQVADISKTIQDPLAAKVRRKLR  186 (263)
T ss_pred             eeccccCCCCCceEEeeechhhccCcHHHHHHHHHH
Confidence            333333333334455678889989999998888884

>cd08241 QOR1 Quinone oxidoreductase (QOR)

Probab=95.18  E-value=0.086  Score=44.85  Aligned_cols=41  Identities=27%  Similarity=0.356  Sum_probs=35.4

Q ss_pred             CCCEEEEcCCCChHHHHHHHHHHHcCCeEEEEeCCcchHHH
Q 044010           46 SGKVVIITGASSGIGEHLAYEYARRGACLALCARREKSLEE   86 (248)
Q Consensus        46 ~~k~~lVtGg~~gIG~aia~~l~~~G~~V~l~~r~~~~~~~   86 (248)
                      +|++++|+|+++++|.+++..+...|++|+.++++.++.+.
T Consensus       139 ~~~~vli~g~~~~~g~~~~~~a~~~g~~v~~~~~~~~~~~~  179 (323)
T cd08241         139 PGETVLVLGAAGGVGLAAVQLAKALGARVIAAASSEEKLAL  179 (323)
T ss_pred             CCCEEEEEcCCchHHHHHHHHHHHhCCEEEEEeCCHHHHHH
Confidence            57899999999999999999888899999999887655443

QOR catalyzes the conversion of a quinone + NAD(P)H to a hydroquinone + NAD(P)+. Quinones are cyclic diones derived from aromatic compounds. Membrane bound QOR acts in the respiratory chains of bacteria and mitochondria, while soluble QOR acts to protect from toxic quinones (e.g. DT-diaphorase) or as a soluble eye-lens protein in some vertebrates (e.g. zeta-crystalin). QOR reduces quinones through a semi-quinone intermediate via a NAD(P)H-dependent single electron transfer. QOR is a member of the medium chain dehydrogenase/reductase family, but lacks the zinc-binding sites of the prototypical alcohol dehydrogenases of this group. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde and NADH, while in yeast and some other microorganisms ADH catalyzes the conversion acetaldehyde to ethanol in alcoholic

>cd05286 QOR2 Quinone oxidoreductase (QOR)

Probab=95.13  E-value=0.1  Score=44.21  Aligned_cols=41  Identities=24%  Similarity=0.282  Sum_probs=35.0

Q ss_pred             CCCEEEEcCCCChHHHHHHHHHHHcCCeEEEEeCCcchHHH
Q 044010           46 SGKVVIITGASSGIGEHLAYEYARRGACLALCARREKSLEE   86 (248)
Q Consensus        46 ~~k~~lVtGg~~gIG~aia~~l~~~G~~V~l~~r~~~~~~~   86 (248)
                      +|++++|.|+++++|.++++.+...|++|+.++++.++.+.
T Consensus       136 ~g~~vlI~g~~g~~g~~~~~~a~~~g~~v~~~~~~~~~~~~  176 (320)
T cd05286         136 PGDTVLVHAAAGGVGLLLTQWAKALGATVIGTVSSEEKAEL  176 (320)
T ss_pred             CCCEEEEEcCCchHHHHHHHHHHHcCCEEEEEcCCHHHHHH
Confidence            57899999999999999998888889999998887665443

Quinone oxidoreductase (QOR) and 2-haloacrylate reductase. QOR catalyzes the conversion of a quinone + NAD(P)H to a hydroquinone + NAD(P)+. Quinones are cyclic diones derived from aromatic compounds. Membrane bound QOR actin the respiratory chains of bacteria and mitochondria, while soluble QOR acts to protect from toxic quinones (e.g. DT-diaphorase) or as a soluble eye-lens protein in some vertebrates (e.g. zeta-crystalin). QOR reduces quinones through a semi-quinone intermediate via a NAD(P)H-dependent single electron transfer. QOR is a member of the medium chain dehydrogenase/reductase family, but lacks the zinc-binding sites of the prototypical alcohol dehydrogenases of this group. 2-haloacrylate reductase, a member of this subgroup, catalyzes the NADPH-dependent reduction of a carbon-carbon double bond in organohalogen compounds. Although similar to QOR, Burkholderia 2-haloacrylate reductase does not act on the quinones 1,4-benzoquinone

>PRK15469 ghrA bifunctional glyoxylate/hydroxypyruvate reductase A; Provisional

Probab=95.12  E-value=0.18  Score=43.85  Aligned_cols=105  Identities=13%  Similarity=0.101  Sum_probs=62.4

Q ss_pred             cCCCCCEEEEcCCCChHHHHHHHHHHHcCCeEEEEeCCcchHHH---H--HHHHHhh-CCCcEEEEEccCCCHHHHHHHH
Q 044010           43 EDVSGKVVIITGASSGIGEHLAYEYARRGACLALCARREKSLEE---V--ADTAREI-GSPDVITIRADVSKVDDCRSLV  116 (248)
Q Consensus        43 ~~~~~k~~lVtGg~~gIG~aia~~l~~~G~~V~l~~r~~~~~~~---~--~~~l~~~-~~~~v~~~~~D~~~~~~~~~~~  116 (248)
                      ..++||++.|.|- |.||+++|++|...|++|...+|..++...   .  ...+.+. ...++..+.+-.+..  .+.++
T Consensus       132 ~~l~g~tvgIvG~-G~IG~~vA~~l~afG~~V~~~~~~~~~~~~~~~~~~~~~l~e~l~~aDvvv~~lPlt~~--T~~li  208 (312)
T PRK15469        132 YHREDFTIGILGA-GVLGSKVAQSLQTWGFPLRCWSRSRKSWPGVQSFAGREELSAFLSQTRVLINLLPNTPE--TVGII  208 (312)
T ss_pred             CCcCCCEEEEECC-CHHHHHHHHHHHHCCCEEEEEeCCCCCCCCceeecccccHHHHHhcCCEEEECCCCCHH--HHHHh
Confidence            4688999999965 899999999999999999998886543111   0  0111111 123555555555543  44444


Q ss_pred             HH-HHhHcCCccEEEEccccCCcccccccCChHHHHHHHHhh
Q 044010          117 EE-TMNHFGRLDHLVNNAGISSVALFEDIVNITDFKQIMNIN  157 (248)
Q Consensus       117 ~~-~~~~~g~id~vv~~ag~~~~~~~~~~~~~~~~~~~~~~n  157 (248)
                      ++ ..+.. +.+.++-|.|...   .   .+.+++.+.++.+
T Consensus       209 ~~~~l~~m-k~ga~lIN~aRG~---v---Vde~aL~~aL~~g  243 (312)
T PRK15469        209 NQQLLEQL-PDGAYLLNLARGV---H---VVEDDLLAALDSG  243 (312)
T ss_pred             HHHHHhcC-CCCcEEEECCCcc---c---cCHHHHHHHHhcC
Confidence            42 22333 4566666766443   2   2446665655544

>PLN02178 cinnamyl-alcohol dehydrogenase

Probab=95.12  E-value=0.15  Score=45.53  Aligned_cols=75  Identities=17%  Similarity=0.265  Sum_probs=47.3

Q ss_pred             CCCEEEEcCCCChHHHHHHHHHHHcCCeEEEEeCCcchHHHHHHHHHhhCCCcEEEEEccCCCHHHHHHHHHHHHhHcCC
Q 044010           46 SGKVVIITGASSGIGEHLAYEYARRGACLALCARREKSLEEVADTAREIGSPDVITIRADVSKVDDCRSLVEETMNHFGR  125 (248)
Q Consensus        46 ~~k~~lVtGg~~gIG~aia~~l~~~G~~V~l~~r~~~~~~~~~~~l~~~~~~~v~~~~~D~~~~~~~~~~~~~~~~~~g~  125 (248)
                      .|++++|.|+ |++|...++.....|++|++++++.++..+..   ++.+- .   ...|..+.+.+       .+..+.
T Consensus       178 ~g~~VlV~G~-G~vG~~avq~Ak~~Ga~Vi~~~~~~~~~~~~a---~~lGa-~---~~i~~~~~~~v-------~~~~~~  242 (375)
T PLN02178        178 SGKRLGVNGL-GGLGHIAVKIGKAFGLRVTVISRSSEKEREAI---DRLGA-D---SFLVTTDSQKM-------KEAVGT  242 (375)
T ss_pred             CCCEEEEEcc-cHHHHHHHHHHHHcCCeEEEEeCChHHhHHHH---HhCCC-c---EEEcCcCHHHH-------HHhhCC
Confidence            6889999876 89999998887788999988887755422222   22232 1   11233332222       122246


Q ss_pred             ccEEEEcccc
Q 044010          126 LDHLVNNAGI  135 (248)
Q Consensus       126 id~vv~~ag~  135 (248)
                      +|+++.++|.
T Consensus       243 ~D~vid~~G~  252 (375)
T PLN02178        243 MDFIIDTVSA  252 (375)
T ss_pred             CcEEEECCCc
Confidence            8999998774

>cd08291 ETR_like_1 2-enoyl thioester reductase (ETR) like proteins, child 1

Probab=95.10  E-value=0.12  Score=44.84  Aligned_cols=78  Identities=21%  Similarity=0.264  Sum_probs=46.8

Q ss_pred             CCEEEEcCCCChHHHHHHHHHHHcCCeEEEEeCCcchHHHHHHHHHhhCCCcEEEEEccCCCHHHHHHHHHHHHhHcCCc
Q 044010           47 GKVVIITGASSGIGEHLAYEYARRGACLALCARREKSLEEVADTAREIGSPDVITIRADVSKVDDCRSLVEETMNHFGRL  126 (248)
Q Consensus        47 ~k~~lVtGg~~gIG~aia~~l~~~G~~V~l~~r~~~~~~~~~~~l~~~~~~~v~~~~~D~~~~~~~~~~~~~~~~~~g~i  126 (248)
                      +++++++||++++|...++.....|++|+.+++++++.+.+    ++.+..  .+  .|..+.+..++ +.+... ...+
T Consensus       144 ~~vlv~~~g~g~vG~~a~q~a~~~G~~vi~~~~~~~~~~~~----~~~g~~--~~--i~~~~~~~~~~-v~~~~~-~~~~  213 (324)
T cd08291         144 AKAVVHTAAASALGRMLVRLCKADGIKVINIVRRKEQVDLL----KKIGAE--YV--LNSSDPDFLED-LKELIA-KLNA  213 (324)
T ss_pred             CcEEEEccCccHHHHHHHHHHHHcCCEEEEEeCCHHHHHHH----HHcCCc--EE--EECCCccHHHH-HHHHhC-CCCC
Confidence            45555569999999998876667799999988887654433    233321  12  23333222222 222211 1269


Q ss_pred             cEEEEccc
Q 044010          127 DHLVNNAG  134 (248)
Q Consensus       127 d~vv~~ag  134 (248)
                      |+++.+.|
T Consensus       214 d~vid~~g  221 (324)
T cd08291         214 TIFFDAVG  221 (324)
T ss_pred             cEEEECCC
Confidence            99999877

2-enoyl thioester reductase (ETR) like proteins. ETR catalyzes the NADPH-dependent conversion of trans-2-enoyl acyl carrier protein/coenzyme A (ACP/CoA) to acyl-(ACP/CoA) in fatty acid synthesis. 2-enoyl thioester reductase activity has been linked in Candida tropicalis as essential in maintaining mitiochondrial respiratory function. This ETR family is a part of the medium chain dehydrogenase/reductase family, but lack the zinc coordination sites characteristic of the 2-enoyl thioester reductase (ETR) like proteins. ETR catalyzes the NADPH-dependent dependent conversion of trans-2-enoyl acyl carrier protein/coenzyme A (ACP/CoA) to acyl-(ACP/CoA) in fatty acid synthesis. 2-enoyl thioester reductase activity has been linked in Candida tropicalis as essential in maintaining mitiochondrial respiratory function. This ETR family is a part of the medium chain dehydrogenase/reductase family, but lack the zinc coordin

>cd08299 alcohol_DH_class_I_II_IV class I, II, IV alcohol dehydrogenases

Probab=95.09  E-value=0.15  Score=45.31  Aligned_cols=79  Identities=14%  Similarity=0.223  Sum_probs=49.8

Q ss_pred             CCCEEEEcCCCChHHHHHHHHHHHcCC-eEEEEeCCcchHHHHHHHHHhhCCCcEEEEEccCCCH-HHHHHHHHHHHhHc
Q 044010           46 SGKVVIITGASSGIGEHLAYEYARRGA-CLALCARREKSLEEVADTAREIGSPDVITIRADVSKV-DDCRSLVEETMNHF  123 (248)
Q Consensus        46 ~~k~~lVtGg~~gIG~aia~~l~~~G~-~V~l~~r~~~~~~~~~~~l~~~~~~~v~~~~~D~~~~-~~~~~~~~~~~~~~  123 (248)
                      +|.+++|.| ++++|.+++..+...|+ +|++++++.++.+.+ +++   +-+    ...+..+. ++..+.+.+...  
T Consensus       190 ~g~~VlV~G-~g~vG~~~~~~a~~~G~~~Vi~~~~~~~~~~~a-~~l---Ga~----~~i~~~~~~~~~~~~v~~~~~--  258 (373)
T cd08299         190 PGSTCAVFG-LGGVGLSAIMGCKAAGASRIIAVDINKDKFAKA-KEL---GAT----ECINPQDYKKPIQEVLTEMTD--  258 (373)
T ss_pred             CCCEEEEEC-CCHHHHHHHHHHHHcCCCeEEEEcCCHHHHHHH-HHc---CCc----eEecccccchhHHHHHHHHhC--
Confidence            478999995 58999999988888999 799998887655444 222   211    11222221 122333333322  


Q ss_pred             CCccEEEEcccc
Q 044010          124 GRLDHLVNNAGI  135 (248)
Q Consensus       124 g~id~vv~~ag~  135 (248)
                      +.+|.++.++|.
T Consensus       259 ~~~d~vld~~g~  270 (373)
T cd08299         259 GGVDFSFEVIGR  270 (373)
T ss_pred             CCCeEEEECCCC
Confidence            469999998773

NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes or ketones. This group includes alcohol dehydrogenases corresponding to mammalian classes I, II, IV. Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde and NADH, while in yeast and some other microorganisms ADH catalyzes the conversion acetaldehyde to ethanol in alcoholic fermentation. ADH is a member of the medium chain alcohol dehydrogenase family (MDR), which have a NAD(P)(H)-binding domain in a Rossmann fold of a beta-alpha form. The NAD(H)-binding region is comprised of 2 structurally similar halves, each of which contacts a mononucleotide. A GxGxxG motif after the first mononucleotide contact half allows the close contact of the coenzyme with the ADH backbone. The N-terminal catalytic domain has a distant homology to GroES. These proteins typically form dimers (typically

>PRK14175 bifunctional 5,10-methylene-tetrahydrofolate dehydrogenase/ 5,10-methylene-tetrahydrofolate cyclohydrolase; Provisional

Probab=95.08  E-value=0.07  Score=45.70  Aligned_cols=38  Identities=21%  Similarity=0.399  Sum_probs=35.3

Q ss_pred             CCCCCEEEEcCCCChHHHHHHHHHHHcCCeEEEEeCCc
Q 044010           44 DVSGKVVIITGASSGIGEHLAYEYARRGACLALCARRE   81 (248)
Q Consensus        44 ~~~~k~~lVtGg~~gIG~aia~~l~~~G~~V~l~~r~~   81 (248)
                      +++||+++|.|.+.-+|+.++..|..+|++|.++.++.
T Consensus       155 ~l~Gk~vvVIGrs~~VG~pla~lL~~~gatVtv~~s~t  192 (286)
T PRK14175        155 DLEGKNAVVIGRSHIVGQPVSKLLLQKNASVTILHSRS  192 (286)
T ss_pred             CCCCCEEEEECCCchhHHHHHHHHHHCCCeEEEEeCCc
Confidence            79999999999999999999999999999999988754

>COG2085 Predicted dinucleotide-binding enzymes [General function prediction only]

Probab=95.08  E-value=0.053  Score=44.11  Aligned_cols=71  Identities=21%  Similarity=0.334  Sum_probs=46.3

Q ss_pred             EEcCCCChHHHHHHHHHHHcCCeEEEEeCCcch-HHHHHHHHHhh--C--------CCcEEEEEccCCCHHHHHHHHHHH
Q 044010           51 IITGASSGIGEHLAYEYARRGACLALCARREKS-LEEVADTAREI--G--------SPDVITIRADVSKVDDCRSLVEET  119 (248)
Q Consensus        51 lVtGg~~gIG~aia~~l~~~G~~V~l~~r~~~~-~~~~~~~l~~~--~--------~~~v~~~~~D~~~~~~~~~~~~~~  119 (248)
                      ...||+|-||.+++++|++.|++|++.+|+.++ .+...+.+...  +        ...+.++.+-   .+.+.....++
T Consensus         4 ~~i~GtGniG~alA~~~a~ag~eV~igs~r~~~~~~a~a~~l~~~i~~~~~~dA~~~aDVVvLAVP---~~a~~~v~~~l   80 (211)
T COG2085           4 IAIIGTGNIGSALALRLAKAGHEVIIGSSRGPKALAAAAAALGPLITGGSNEDAAALADVVVLAVP---FEAIPDVLAEL   80 (211)
T ss_pred             EEEeccChHHHHHHHHHHhCCCeEEEecCCChhHHHHHHHhhccccccCChHHHHhcCCEEEEecc---HHHHHhHHHHH
Confidence            446788999999999999999999999776654 33444333221  0        1234444443   35566677777


Q ss_pred             HhHcC
Q 044010          120 MNHFG  124 (248)
Q Consensus       120 ~~~~g  124 (248)
                      .+.++
T Consensus        81 ~~~~~   85 (211)
T COG2085          81 RDALG   85 (211)
T ss_pred             HHHhC
Confidence            76654

>TIGR03840 TMPT_Se_Te thiopurine S-methyltransferase, Se/Te detoxification family

Probab=95.05  E-value=0.4  Score=39.32  Aligned_cols=79  Identities=13%  Similarity=0.103  Sum_probs=53.4

Q ss_pred             CCCEEEEcCCCChHHHHHHHHHHHcCCeEEEEeCCcchHHHHHHHHHh------------hCCCcEEEEEccCCCHHHHH
Q 044010           46 SGKVVIITGASSGIGEHLAYEYARRGACLALCARREKSLEEVADTARE------------IGSPDVITIRADVSKVDDCR  113 (248)
Q Consensus        46 ~~k~~lVtGg~~gIG~aia~~l~~~G~~V~l~~r~~~~~~~~~~~l~~------------~~~~~v~~~~~D~~~~~~~~  113 (248)
                      ++.++|+.|++.|   .=+..|+++|++|+.++.++...+.+.++-..            ....++.++.+|+.+.+.  
T Consensus        34 ~~~rvLd~GCG~G---~da~~LA~~G~~V~gvD~S~~Ai~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~D~~~~~~--  108 (213)
T TIGR03840        34 AGARVFVPLCGKS---LDLAWLAEQGHRVLGVELSEIAVEQFFAENGLTPTVTQQGEFTRYRAGNIEIFCGDFFALTA--  108 (213)
T ss_pred             CCCeEEEeCCCch---hHHHHHHhCCCeEEEEeCCHHHHHHHHHHcCCCcceeccccceeeecCceEEEEccCCCCCc--
Confidence            5679999999876   45666889999999999998766654332110            012367889999987642  


Q ss_pred             HHHHHHHhHcCCccEEEEccccC
Q 044010          114 SLVEETMNHFGRLDHLVNNAGIS  136 (248)
Q Consensus       114 ~~~~~~~~~~g~id~vv~~ag~~  136 (248)
                             +..+++|.++-.+...
T Consensus       109 -------~~~~~fD~i~D~~~~~  124 (213)
T TIGR03840       109 -------ADLGPVDAVYDRAALI  124 (213)
T ss_pred             -------ccCCCcCEEEechhhc
Confidence                   1124678887765543

Members of this family are thiopurine S-methyltransferase from a branch in which at least some member proteins can perform selenium methylation as a means to detoxify selenium, or perform a related detoxification of tellurium. Note that the EC number definition does not specify a particular thiopurine, but rather represents a class of activity.

>PRK14188 bifunctional 5,10-methylene-tetrahydrofolate dehydrogenase/ 5,10-methylene-tetrahydrofolate cyclohydrolase; Provisional

Probab=95.04  E-value=0.11  Score=44.82  Aligned_cols=78  Identities=22%  Similarity=0.264  Sum_probs=53.4

Q ss_pred             CCCCCEEEEcCCCChHHHHHHHHHHHcCCeEEEEe-CCcchHHHHHHHHHhhCCCcEEEEEccCCCHHHHHHHHHHHHhH
Q 044010           44 DVSGKVVIITGASSGIGEHLAYEYARRGACLALCA-RREKSLEEVADTAREIGSPDVITIRADVSKVDDCRSLVEETMNH  122 (248)
Q Consensus        44 ~~~~k~~lVtGg~~gIG~aia~~l~~~G~~V~l~~-r~~~~~~~~~~~l~~~~~~~v~~~~~D~~~~~~~~~~~~~~~~~  122 (248)
                      +++||+++|.|-++-+|..+|..|+++|++|.+.. |+.+ +++.   .+     +..++.+=+.+.+.+++.+      
T Consensus       155 ~~~Gk~V~viGrs~~mG~PmA~~L~~~g~tVtv~~~rT~~-l~e~---~~-----~ADIVIsavg~~~~v~~~~------  219 (296)
T PRK14188        155 DLSGLNAVVIGRSNLVGKPMAQLLLAANATVTIAHSRTRD-LPAV---CR-----RADILVAAVGRPEMVKGDW------  219 (296)
T ss_pred             CCCCCEEEEEcCCcchHHHHHHHHHhCCCEEEEECCCCCC-HHHH---Hh-----cCCEEEEecCChhhcchhe------
Confidence            79999999999999999999999999999999984 6542 2222   21     2234444555555444433      


Q ss_pred             cCCccEEEEccccCC
Q 044010          123 FGRLDHLVNNAGISS  137 (248)
Q Consensus       123 ~g~id~vv~~ag~~~  137 (248)
                       -+...+|-..|...
T Consensus       220 -lk~GavVIDvGin~  233 (296)
T PRK14188        220 -IKPGATVIDVGINR  233 (296)
T ss_pred             -ecCCCEEEEcCCcc
Confidence             24556666677654

>COG2130 Putative NADP-dependent oxidoreductases [General function prediction only]

Probab=95.04  E-value=0.1  Score=44.78  Aligned_cols=79  Identities=15%  Similarity=0.187  Sum_probs=54.1

Q ss_pred             CCCEEEEcCCCChHHHHHHHHHHHcCCeEEEEeCCcchHHHHHHHHHhhCCCcEEEEEccCCCHHHHHHHHHHHHhHc-C
Q 044010           46 SGKVVIITGASSGIGEHLAYEYARRGACLALCARREKSLEEVADTAREIGSPDVITIRADVSKVDDCRSLVEETMNHF-G  124 (248)
Q Consensus        46 ~~k~~lVtGg~~gIG~aia~~l~~~G~~V~l~~r~~~~~~~~~~~l~~~~~~~v~~~~~D~~~~~~~~~~~~~~~~~~-g  124 (248)
                      .|.|++|+|++|..|.-+.+.---.|++|+-+.-.+++.+-+.+++   +.+    ...|-..+ ++.+.   +.+.. .
T Consensus       150 ~GetvvVSaAaGaVGsvvgQiAKlkG~rVVGiaGg~eK~~~l~~~l---GfD----~~idyk~~-d~~~~---L~~a~P~  218 (340)
T COG2130         150 AGETVVVSAAAGAVGSVVGQIAKLKGCRVVGIAGGAEKCDFLTEEL---GFD----AGIDYKAE-DFAQA---LKEACPK  218 (340)
T ss_pred             CCCEEEEEecccccchHHHHHHHhhCCeEEEecCCHHHHHHHHHhc---CCc----eeeecCcc-cHHHH---HHHHCCC
Confidence            5999999999999997554433346999999998888777665544   211    33455555 33333   33333 3


Q ss_pred             CccEEEEcccc
Q 044010          125 RLDHLVNNAGI  135 (248)
Q Consensus       125 ~id~vv~~ag~  135 (248)
                      .||+.+-|.|.
T Consensus       219 GIDvyfeNVGg  229 (340)
T COG2130         219 GIDVYFENVGG  229 (340)
T ss_pred             CeEEEEEcCCc
Confidence            79999999884

>cd08230 glucose_DH Glucose dehydrogenase

Probab=95.01  E-value=0.15  Score=44.88  Aligned_cols=78  Identities=23%  Similarity=0.322  Sum_probs=47.8

Q ss_pred             CCCCEEEEcCCCChHHHHHHHHHHHcCCeEEEEeCCcchHHHHHHHHHhhCCCcEEEEEccCCCHHHHHHHHHHHHhHcC
Q 044010           45 VSGKVVIITGASSGIGEHLAYEYARRGACLALCARREKSLEEVADTAREIGSPDVITIRADVSKVDDCRSLVEETMNHFG  124 (248)
Q Consensus        45 ~~~k~~lVtGg~~gIG~aia~~l~~~G~~V~l~~r~~~~~~~~~~~l~~~~~~~v~~~~~D~~~~~~~~~~~~~~~~~~g  124 (248)
                      ..|++++|+|+ |++|...++.+...|++|++++|+.... +..+.+++.+. .  .  +|..+. ++.+    . +..+
T Consensus       171 ~~g~~vlI~G~-G~vG~~a~q~ak~~G~~vi~~~~~~~~~-~~~~~~~~~Ga-~--~--v~~~~~-~~~~----~-~~~~  237 (355)
T cd08230         171 WNPRRALVLGA-GPIGLLAALLLRLRGFEVYVLNRRDPPD-PKADIVEELGA-T--Y--VNSSKT-PVAE----V-KLVG  237 (355)
T ss_pred             CCCCEEEEECC-CHHHHHHHHHHHHcCCeEEEEecCCCCH-HHHHHHHHcCC-E--E--ecCCcc-chhh----h-hhcC
Confidence            36889999985 9999999877777899999999843111 11222333332 2  2  243332 2222    1 1235


Q ss_pred             CccEEEEcccc
Q 044010          125 RLDHLVNNAGI  135 (248)
Q Consensus       125 ~id~vv~~ag~  135 (248)
                      .+|++|.++|.
T Consensus       238 ~~d~vid~~g~  248 (355)
T cd08230         238 EFDLIIEATGV  248 (355)
T ss_pred             CCCEEEECcCC
Confidence            79999999873

Glucose dehydrogenase (GlcDH), a member of the medium chain dehydrogenase/zinc-dependent alcohol dehydrogenase-like family, catalyzes the NADP(+)-dependent oxidation of glucose to gluconate, the first step in the Entner-Doudoroff pathway, an alternative to or substitute for glycolysis or the pentose phosphate pathway. The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P) binding-Rossman fold domain of a beta-alpha form and an N-terminal catalytic domain with distant homology to GroES. The MDR group contai

>TIGR00446 nop2p NOL1/NOP2/sun family putative RNA methylase

Probab=94.96  E-value=0.81  Score=38.75  Aligned_cols=124  Identities=11%  Similarity=0.057  Sum_probs=74.4

Q ss_pred             CCCEEEEcCCC-ChHHHHHHHHHHHcCCeEEEEeCCcchHHHHHHHHHhhCCCcEEEEEccCCCHHHHHHHHHHHHhHcC
Q 044010           46 SGKVVIITGAS-SGIGEHLAYEYARRGACLALCARREKSLEEVADTAREIGSPDVITIRADVSKVDDCRSLVEETMNHFG  124 (248)
Q Consensus        46 ~~k~~lVtGg~-~gIG~aia~~l~~~G~~V~l~~r~~~~~~~~~~~l~~~~~~~v~~~~~D~~~~~~~~~~~~~~~~~~g  124 (248)
                      .|.++|=.|++ |+...+++..+...| +|+.++.++..++.+.+.++..+-..+.++..|.++..          ...+
T Consensus        71 ~g~~VLDl~ag~G~kt~~la~~~~~~g-~v~a~D~~~~~l~~~~~n~~~~g~~~v~~~~~D~~~~~----------~~~~  139 (264)
T TIGR00446        71 PPERVLDMAAAPGGKTTQISALMKNEG-AIVANEFSKSRTKVLIANINRCGVLNVAVTNFDGRVFG----------AAVP  139 (264)
T ss_pred             CcCEEEEECCCchHHHHHHHHHcCCCC-EEEEEcCCHHHHHHHHHHHHHcCCCcEEEecCCHHHhh----------hhcc
Confidence            45666655554 788888877664445 89999999999988888888766545777777764321          1124


Q ss_pred             CccEEEEccccCCcccccccCChHHH----HHHHHhhhHHHHHHHHHHhhhhhhcCCeEEEEc
Q 044010          125 RLDHLVNNAGISSVALFEDIVNITDF----KQIMNINFWGSVYTTRFAVPHLRYTKGKIVVLS  183 (248)
Q Consensus       125 ~id~vv~~ag~~~~~~~~~~~~~~~~----~~~~~~n~~~~~~l~~~~~~~~~~~~g~iV~is  183 (248)
                      .+|.++.++.....+.+..  .++..    .+.+..-..-...+++.+.+.++ .+|++|+.+
T Consensus       140 ~fD~Vl~D~Pcsg~G~~~~--~p~~~~~~~~~~~~~l~~~q~~iL~~a~~~lk-pgG~lvYst  199 (264)
T TIGR00446       140 KFDAILLDAPCSGEGVIRK--DPSRKKNWSEEDIQEISALQKELIDSAFDALK-PGGVLVYST  199 (264)
T ss_pred             CCCEEEEcCCCCCCccccc--ChhhhhcCCHHHHHHHHHHHHHHHHHHHHhcC-CCCEEEEEe
Confidence            6999998876544322211  11110    11111111223346666666654 678888654

>PF10727 Rossmann-like: Rossmann-like domain; InterPro: IPR019665 This entry represents an NAD/NADP-binding domain with a core Rossmann-type fold, found in an uncharacterised protein family thought to be putative NADP oxidoreductase coenzyme F420-dependent proteins and/or NAD-dependent glycerol-3-phosphate dehydrogenase-like proteins

Probab=94.93  E-value=0.055  Score=40.64  Aligned_cols=90  Identities=20%  Similarity=0.134  Sum_probs=53.5

Q ss_pred             CCEEEEcCCCChHHHHHHHHHHHcCCeEEEE-eCCcchHHHHHHHHHhhC-------CCcEEEEEccCCCHHHHHHHHHH
Q 044010           47 GKVVIITGASSGIGEHLAYEYARRGACLALC-ARREKSLEEVADTAREIG-------SPDVITIRADVSKVDDCRSLVEE  118 (248)
Q Consensus        47 ~k~~lVtGg~~gIG~aia~~l~~~G~~V~l~-~r~~~~~~~~~~~l~~~~-------~~~v~~~~~D~~~~~~~~~~~~~  118 (248)
                      .-++-|.|+ |-.|.++++.|.+.|++|.-+ +|+.+..+++.+.+....       ......+.+-+.|. .+.+++++
T Consensus        10 ~l~I~iIGa-GrVG~~La~aL~~ag~~v~~v~srs~~sa~~a~~~~~~~~~~~~~~~~~~aDlv~iavpDd-aI~~va~~   87 (127)
T PF10727_consen   10 RLKIGIIGA-GRVGTALARALARAGHEVVGVYSRSPASAERAAAFIGAGAILDLEEILRDADLVFIAVPDD-AIAEVAEQ   87 (127)
T ss_dssp             --EEEEECT-SCCCCHHHHHHHHTTSEEEEESSCHH-HHHHHHC--TT-----TTGGGCC-SEEEE-S-CC-HHHHHHHH
T ss_pred             ccEEEEECC-CHHHHHHHHHHHHCCCeEEEEEeCCcccccccccccccccccccccccccCCEEEEEechH-HHHHHHHH
Confidence            346777776 899999999999999988666 566555555554442211       01344455555555 78888888


Q ss_pred             HHhH--cCCccEEEEccccCCc
Q 044010          119 TMNH--FGRLDHLVNNAGISSV  138 (248)
Q Consensus       119 ~~~~--~g~id~vv~~ag~~~~  138 (248)
                      +.+.  ..+=.+++|+.|....
T Consensus        88 La~~~~~~~g~iVvHtSGa~~~  109 (127)
T PF10727_consen   88 LAQYGAWRPGQIVVHTSGALGS  109 (127)
T ss_dssp             HHCC--S-TT-EEEES-SS--G
T ss_pred             HHHhccCCCCcEEEECCCCChH
Confidence            8765  3345699999997653

This Rossmann-fold domain consists of 3-layers alpha/beta/alpha, where the six beta strands are parallel in the order 321456.; PDB: 3DFU_A 3C24_A.

>TIGR01751 crot-CoA-red crotonyl-CoA reductase

Probab=94.93  E-value=0.16  Score=45.53  Aligned_cols=39  Identities=21%  Similarity=0.243  Sum_probs=33.1

Q ss_pred             CCCEEEEcCCCChHHHHHHHHHHHcCCeEEEEeCCcchH
Q 044010           46 SGKVVIITGASSGIGEHLAYEYARRGACLALCARREKSL   84 (248)
Q Consensus        46 ~~k~~lVtGg~~gIG~aia~~l~~~G~~V~l~~r~~~~~   84 (248)
                      +|.+++|+|+++++|.++++.+...|++++++.++.++.
T Consensus       189 ~g~~vlV~Ga~g~vG~~ai~~ak~~G~~vi~~~~~~~~~  227 (398)
T TIGR01751       189 PGDNVLIWGAAGGLGSYATQLARAGGGNPVAVVSSPEKA  227 (398)
T ss_pred             CCCEEEEEcCCcHHHHHHHHHHHHcCCeEEEEcCCHHHH
Confidence            578999999999999999988888899988887766543

The enzyme modelled by this alignment is responsible for the conversion of crotonyl-CoA reductase to butyryl-CoA. In serine cycle methylotrophic bacteria this enzyme is involved in the process of acetyl-CoA to glyoxylate. In other bacteria the enzyme is used to produce butyrate for incorporation into polyketides such as tylosin from Streptomyces fradiae and coronatine from Pseudomonas syringae.

>TIGR00537 hemK_rel_arch HemK-related putative methylase

Probab=94.93  E-value=1  Score=35.51  Aligned_cols=78  Identities=18%  Similarity=0.277  Sum_probs=54.3

Q ss_pred             CCCCCEEEEcCCCChHHHHHHHHHHHcCCeEEEEeCCcchHHHHHHHHHhhCCCcEEEEEccCCCHHHHHHHHHHHHhHc
Q 044010           44 DVSGKVVIITGASSGIGEHLAYEYARRGACLALCARREKSLEEVADTAREIGSPDVITIRADVSKVDDCRSLVEETMNHF  123 (248)
Q Consensus        44 ~~~~k~~lVtGg~~gIG~aia~~l~~~G~~V~l~~r~~~~~~~~~~~l~~~~~~~v~~~~~D~~~~~~~~~~~~~~~~~~  123 (248)
                      ..++++++=.|++.|.   ++..++++|.+|+.++.+++..+.+.+.++..+. .+.++..|+.+..            .
T Consensus        17 ~~~~~~vLdlG~G~G~---~~~~l~~~~~~v~~vD~s~~~~~~a~~~~~~~~~-~~~~~~~d~~~~~------------~   80 (179)
T TIGR00537        17 ELKPDDVLEIGAGTGL---VAIRLKGKGKCILTTDINPFAVKELRENAKLNNV-GLDVVMTDLFKGV------------R   80 (179)
T ss_pred             hcCCCeEEEeCCChhH---HHHHHHhcCCEEEEEECCHHHHHHHHHHHHHcCC-ceEEEEccccccc------------C
Confidence            3456678888887663   3445666677899999998887777776665443 6778888875421            1


Q ss_pred             CCccEEEEccccCC
Q 044010          124 GRLDHLVNNAGISS  137 (248)
Q Consensus       124 g~id~vv~~ag~~~  137 (248)
                      +++|.++.|.....
T Consensus        81 ~~fD~Vi~n~p~~~   94 (179)
T TIGR00537        81 GKFDVILFNPPYLP   94 (179)
T ss_pred             CcccEEEECCCCCC
Confidence            47999999976543

The gene hemK from E. coli was found to contribute to heme biosynthesis and originally suggested to be protoporphyrinogen oxidase (Medline 95189105). Functional analysis of the nearest homolog in Saccharomyces cerevisiae, YNL063w, finds it is not protoporphyrinogen oxidase and sequence analysis suggests that HemK homologs have S-adenosyl-methionine-dependent methyltransferase activity (Medline 99237242). Homologs are found, usually in a single copy, in nearly all completed genomes, but varying somewhat in apparent domain architecture. This model represents an archaeal and eukaryotic protein family that lacks an N-terminal domain found in HemK and its eubacterial homologs. It is found in a single copy in the first six completed archaeal and eukaryotic genomes.

>PRK13243 glyoxylate reductase; Reviewed

Probab=94.91  E-value=0.23  Score=43.62  Aligned_cols=39  Identities=31%  Similarity=0.348  Sum_probs=35.3

Q ss_pred             cCCCCCEEEEcCCCChHHHHHHHHHHHcCCeEEEEeCCcc
Q 044010           43 EDVSGKVVIITGASSGIGEHLAYEYARRGACLALCARREK   82 (248)
Q Consensus        43 ~~~~~k~~lVtGg~~gIG~aia~~l~~~G~~V~l~~r~~~   82 (248)
                      .++.||++.|.|- |.||+++|+.|...|++|+..+|+..
T Consensus       146 ~~L~gktvgIiG~-G~IG~~vA~~l~~~G~~V~~~d~~~~  184 (333)
T PRK13243        146 YDVYGKTIGIIGF-GRIGQAVARRAKGFGMRILYYSRTRK  184 (333)
T ss_pred             cCCCCCEEEEECc-CHHHHHHHHHHHHCCCEEEEECCCCC
Confidence            4689999999987 99999999999999999999988754

>PRK13771 putative alcohol dehydrogenase; Provisional

Probab=94.89  E-value=0.11  Score=44.89  Aligned_cols=43  Identities=28%  Similarity=0.366  Sum_probs=36.8

Q ss_pred             CCCCEEEEcCCCChHHHHHHHHHHHcCCeEEEEeCCcchHHHH
Q 044010           45 VSGKVVIITGASSGIGEHLAYEYARRGACLALCARREKSLEEV   87 (248)
Q Consensus        45 ~~~k~~lVtGg~~gIG~aia~~l~~~G~~V~l~~r~~~~~~~~   87 (248)
                      -.+.+++|.|+++.+|.++++.+...|.+|+.+.++.++.+..
T Consensus       161 ~~~~~vlI~g~~g~~g~~~~~la~~~g~~vi~~~~~~~~~~~~  203 (334)
T PRK13771        161 KKGETVLVTGAGGGVGIHAIQVAKALGAKVIAVTSSESKAKIV  203 (334)
T ss_pred             CCCCEEEEECCCccHHHHHHHHHHHcCCEEEEEeCCHHHHHHH
Confidence            3578999999999999999998888999999998887665544

>cd08277 liver_alcohol_DH_like Liver alcohol dehydrogenase

Probab=94.88  E-value=0.18  Score=44.64  Aligned_cols=80  Identities=18%  Similarity=0.219  Sum_probs=49.4

Q ss_pred             CCCCEEEEcCCCChHHHHHHHHHHHcCC-eEEEEeCCcchHHHHHHHHHhhCCCcEEEEEccCCCH-HHHHHHHHHHHhH
Q 044010           45 VSGKVVIITGASSGIGEHLAYEYARRGA-CLALCARREKSLEEVADTAREIGSPDVITIRADVSKV-DDCRSLVEETMNH  122 (248)
Q Consensus        45 ~~~k~~lVtGg~~gIG~aia~~l~~~G~-~V~l~~r~~~~~~~~~~~l~~~~~~~v~~~~~D~~~~-~~~~~~~~~~~~~  122 (248)
                      -+|.+++|.| ++++|...++.+...|+ +|+.+++++++.+.+ +++   +-..  +  .|..+. ..+.+.+.+... 
T Consensus       183 ~~g~~vlV~G-~g~vG~~~~~~a~~~G~~~Vi~~~~~~~~~~~~-~~~---ga~~--~--i~~~~~~~~~~~~~~~~~~-  252 (365)
T cd08277         183 EPGSTVAVFG-LGAVGLSAIMGAKIAGASRIIGVDINEDKFEKA-KEF---GATD--F--INPKDSDKPVSEVIREMTG-  252 (365)
T ss_pred             CCCCEEEEEC-CCHHHHHHHHHHHHcCCCeEEEEeCCHHHHHHH-HHc---CCCc--E--eccccccchHHHHHHHHhC-
Confidence            3588999997 59999999887777898 788888877654443 222   2111  1  222221 122333333322 


Q ss_pred             cCCccEEEEcccc
Q 044010          123 FGRLDHLVNNAGI  135 (248)
Q Consensus       123 ~g~id~vv~~ag~  135 (248)
                       +.+|+++.++|.
T Consensus       253 -~g~d~vid~~g~  264 (365)
T cd08277         253 -GGVDYSFECTGN  264 (365)
T ss_pred             -CCCCEEEECCCC
Confidence             469999998773

NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde and NADH, while in yeast and some other microorganisms ADH catalyzes the conversion acetaldehyde to ethanol in alcoholic fermentation. There are 7 vertebrate ADH 7 classes, 6 of which have been identified in humans. Class III, glutathione-dependent formaldehyde dehydrogenase, has been identified as the primordial form and exists in diverse species, including plants, micro-organisms, vertebrates, and invertebrates. Class I, typified by liver dehydrogenase, is an evolving form. Gene duplication and functional specialization of ADH into ADH classes and subclasses created numerous forms in vertebrates. For example, the A, B and C (formerly alpha, beta, gamma) human class I subunits have high overall structural similarity, but differ i

>TIGR03451 mycoS_dep_FDH mycothiol-dependent formaldehyde dehydrogenase

Probab=94.87  E-value=0.12  Score=45.48  Aligned_cols=79  Identities=22%  Similarity=0.300  Sum_probs=48.5

Q ss_pred             CCCEEEEcCCCChHHHHHHHHHHHcCCe-EEEEeCCcchHHHHHHHHHhhCCCcEEEEEccCCCHHHHHHHHHHHHhHcC
Q 044010           46 SGKVVIITGASSGIGEHLAYEYARRGAC-LALCARREKSLEEVADTAREIGSPDVITIRADVSKVDDCRSLVEETMNHFG  124 (248)
Q Consensus        46 ~~k~~lVtGg~~gIG~aia~~l~~~G~~-V~l~~r~~~~~~~~~~~l~~~~~~~v~~~~~D~~~~~~~~~~~~~~~~~~g  124 (248)
                      .|++++|.|+ |++|...++.+...|++ |+.+++++++.+.+    ++.+.+    ...|..+.+..+. +.+... ..
T Consensus       176 ~g~~VlV~G~-g~vG~~a~~~ak~~G~~~Vi~~~~~~~~~~~~----~~~Ga~----~~i~~~~~~~~~~-i~~~~~-~~  244 (358)
T TIGR03451       176 RGDSVAVIGC-GGVGDAAIAGAALAGASKIIAVDIDDRKLEWA----REFGAT----HTVNSSGTDPVEA-IRALTG-GF  244 (358)
T ss_pred             CCCEEEEECC-CHHHHHHHHHHHHcCCCeEEEEcCCHHHHHHH----HHcCCc----eEEcCCCcCHHHH-HHHHhC-CC
Confidence            5889999975 99999998877778984 88888877654443    222321    1224433322222 222111 12


Q ss_pred             CccEEEEcccc
Q 044010          125 RLDHLVNNAGI  135 (248)
Q Consensus       125 ~id~vv~~ag~  135 (248)
                      .+|+++.++|.
T Consensus       245 g~d~vid~~g~  255 (358)
T TIGR03451       245 GADVVIDAVGR  255 (358)
T ss_pred             CCCEEEECCCC
Confidence            58999998874

Members of this protein family are mycothiol-dependent formaldehyde dehydrogenase (EC 1.2.1.66). This protein is found, so far, only in the Actinobacteria (Mycobacterium sp., Streptomyces sp., Corynebacterium sp., and related species), where mycothione replaces glutathione.

>TIGR03201 dearomat_had 6-hydroxycyclohex-1-ene-1-carbonyl-CoA dehydrogenase

Probab=94.82  E-value=0.25  Score=43.37  Aligned_cols=41  Identities=27%  Similarity=0.423  Sum_probs=34.7

Q ss_pred             CCCEEEEcCCCChHHHHHHHHHHHcCCeEEEEeCCcchHHHH
Q 044010           46 SGKVVIITGASSGIGEHLAYEYARRGACLALCARREKSLEEV   87 (248)
Q Consensus        46 ~~k~~lVtGg~~gIG~aia~~l~~~G~~V~l~~r~~~~~~~~   87 (248)
                      +|++++|.|+ |++|...++.+...|++|+++++++++.+.+
T Consensus       166 ~g~~VlV~G~-G~vG~~a~~~a~~~G~~vi~~~~~~~~~~~~  206 (349)
T TIGR03201       166 KGDLVIVIGA-GGVGGYMVQTAKAMGAAVVAIDIDPEKLEMM  206 (349)
T ss_pred             CCCEEEEECC-CHHHHHHHHHHHHcCCeEEEEcCCHHHHHHH
Confidence            5889999999 9999999888888899999998887765433

Members of this protein family are 6-hydroxycyclohex-1-ene-1-carbonyl-CoA dehydrogenase, an enzyme in the anaerobic metabolism of aromatic enzymes by way of benzoyl-CoA, as seen in Thauera aromatica, Geobacter metallireducens, and Azoarcus sp. The experimentally characterized form from T. aromatica uses only NAD+, not NADP+. Note that Rhodopseudomonas palustris uses a different pathway to perform a similar degradation of benzoyl-CoA to 3-hydroxpimelyl-CoA.

>PF02882 THF_DHG_CYH_C: Tetrahydrofolate dehydrogenase/cyclohydrolase, NAD(P)-binding domain; InterPro: IPR020631 Enzymes that participate in the transfer of one-carbon units require the coenzyme tetrahydrofolate (THF)

Probab=94.79  E-value=0.072  Score=41.66  Aligned_cols=44  Identities=34%  Similarity=0.618  Sum_probs=34.2

Q ss_pred             cCCCCCEEEEcCCCChHHHHHHHHHHHcCCeEEEEeCCcchHHH
Q 044010           43 EDVSGKVVIITGASSGIGEHLAYEYARRGACLALCARREKSLEE   86 (248)
Q Consensus        43 ~~~~~k~~lVtGg~~gIG~aia~~l~~~G~~V~l~~r~~~~~~~   86 (248)
                      -+++||+++|.|.+.-+|+.++..|.++|+.|.++..+.+.+++
T Consensus        32 ~~l~Gk~v~VvGrs~~VG~Pla~lL~~~~atVt~~h~~T~~l~~   75 (160)
T PF02882_consen   32 IDLEGKKVVVVGRSNIVGKPLAMLLLNKGATVTICHSKTKNLQE   75 (160)
T ss_dssp             -STTT-EEEEE-TTTTTHHHHHHHHHHTT-EEEEE-TTSSSHHH
T ss_pred             CCCCCCEEEEECCcCCCChHHHHHHHhCCCeEEeccCCCCcccc
Confidence            37999999999999999999999999999999998776544433

Various reactions generate one-carbon derivatives of THF, which can be interconverted between different oxidation states by methylene-THF dehydrogenase (1.5.1.5 from EC), methenyl-THF cyclohydrolase (3.5.4.9 from EC) and formyl-THF synthetase (6.3.4.3 from EC) [, ]. The dehydrogenase and cyclohydrolase activities are expressed by a variety of multifunctional enzymes, including the tri-functional eukaryotic C1-tetrahydrofolate synthase []; a bifunctional eukaryotic mitochondrial protein; and the bifunctional Escherichia coli folD protein [, ]. Methylene-tetrahydrofolate dehydrogenase and methenyltetrahydrofolate cyclo-hydrolase share an overlapping active site [], and as such are usually located together in proteins, acting in tandem on the carbon-nitrogen bonds of substrates other than peptide bonds. This entry represents the NAD(P)-binding domain found in these enzymes.; GO: 0003824 catalytic activity, 0004488 methylenetetrahydrofolate dehydrogenase (NADP+) activity, 0009396 folic acid-containing compound biosynthetic process, 0055114 oxidation-reduction process; PDB: 1B0A_A 2C2X_B 2C2Y_A 3NGL_C 3NGX_A 4A26_B 1EDZ_A 1EE9_A 3P2O_B 1DIA_A ....

>cd08281 liver_ADH_like1 Zinc-dependent alcohol dehydrogenases (ADH) and class III ADG (AKA formaldehyde dehydrogenase)

Probab=94.79  E-value=0.15  Score=45.12  Aligned_cols=78  Identities=23%  Similarity=0.301  Sum_probs=48.6

Q ss_pred             CCCEEEEcCCCChHHHHHHHHHHHcCC-eEEEEeCCcchHHHHHHHHHhhCCCcEEEEEccCCCHHHHHHHHHHHHhHcC
Q 044010           46 SGKVVIITGASSGIGEHLAYEYARRGA-CLALCARREKSLEEVADTAREIGSPDVITIRADVSKVDDCRSLVEETMNHFG  124 (248)
Q Consensus        46 ~~k~~lVtGg~~gIG~aia~~l~~~G~-~V~l~~r~~~~~~~~~~~l~~~~~~~v~~~~~D~~~~~~~~~~~~~~~~~~g  124 (248)
                      .|++++|.|+ |++|...+..+...|+ +|+++++++++.+-+    ++.+. .   ...|..+.+ ..+.+.++.  .+
T Consensus       191 ~g~~VlV~G~-G~vG~~a~~lak~~G~~~Vi~~~~~~~r~~~a----~~~Ga-~---~~i~~~~~~-~~~~i~~~~--~~  258 (371)
T cd08281         191 PGQSVAVVGL-GGVGLSALLGAVAAGASQVVAVDLNEDKLALA----RELGA-T---ATVNAGDPN-AVEQVRELT--GG  258 (371)
T ss_pred             CCCEEEEECC-CHHHHHHHHHHHHcCCCcEEEEcCCHHHHHHH----HHcCC-c---eEeCCCchh-HHHHHHHHh--CC
Confidence            5789999985 8999998887777899 688888877654433    22232 1   123443332 222222221  13


Q ss_pred             CccEEEEcccc
Q 044010          125 RLDHLVNNAGI  135 (248)
Q Consensus       125 ~id~vv~~ag~  135 (248)
                      .+|++|.++|.
T Consensus       259 g~d~vid~~G~  269 (371)
T cd08281         259 GVDYAFEMAGS  269 (371)
T ss_pred             CCCEEEECCCC
Confidence            69999998874

NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes or ketones. This group contains members identified as zinc dependent alcohol dehydrogenases (ADH), and class III ADG (aka formaldehyde dehydrogenase, FDH). Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde and NADH, while in yeast and some other microorganisms ADH catalyzes the conversion acetaldehyde to ethanol in alcoholic fermentation. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes or ketones. Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde and NADH, while in yeast and some other microorganisms ADH catalyzes the conversion acetaldehyde to ethanol in alcoholic fermentation. Class III ADH are also know as glutathione-dependent formaldehyde dehyd

>PRK07877 hypothetical protein; Provisional

Probab=94.77  E-value=0.18  Score=48.79  Aligned_cols=82  Identities=20%  Similarity=0.238  Sum_probs=55.9

Q ss_pred             cCCCCCEEEEcCCCChHHHHHHHHHHHcCC--eEEEEeCCcc------------------hHHHHHHHHHhhCC-CcEEE
Q 044010           43 EDVSGKVVIITGASSGIGEHLAYEYARRGA--CLALCARREK------------------SLEEVADTAREIGS-PDVIT  101 (248)
Q Consensus        43 ~~~~~k~~lVtGg~~gIG~aia~~l~~~G~--~V~l~~r~~~------------------~~~~~~~~l~~~~~-~~v~~  101 (248)
                      ..+++++++|.|. | +|..++..|+..|.  ++.+++.+.-                  |.+.+.+.+.+.++ .++..
T Consensus       103 ~~L~~~~V~IvG~-G-lGs~~a~~LaraGvvG~l~lvD~D~ve~sNLnRq~~~~~diG~~Kv~~a~~~l~~inp~i~v~~  180 (722)
T PRK07877        103 ERLGRLRIGVVGL-S-VGHAIAHTLAAEGLCGELRLADFDTLELSNLNRVPAGVFDLGVNKAVVAARRIAELDPYLPVEV  180 (722)
T ss_pred             HHHhcCCEEEEEe-c-HHHHHHHHHHHccCCCeEEEEcCCEEcccccccccCChhhcccHHHHHHHHHHHHHCCCCEEEE
Confidence            4688999999999 4 99999999999993  8999988541                  44445555555543 35556


Q ss_pred             EEccCCCHHHHHHHHHHHHhHcCCccEEEEccc
Q 044010          102 IRADVSKVDDCRSLVEETMNHFGRLDHLVNNAG  134 (248)
Q Consensus       102 ~~~D~~~~~~~~~~~~~~~~~~g~id~vv~~ag  134 (248)
                      +...++ .+.++++++       ++|+||.+.-
T Consensus       181 ~~~~i~-~~n~~~~l~-------~~DlVvD~~D  205 (722)
T PRK07877        181 FTDGLT-EDNVDAFLD-------GLDVVVEECD  205 (722)
T ss_pred             EeccCC-HHHHHHHhc-------CCCEEEECCC
Confidence            666665 445555443       4666666643

>PRK11207 tellurite resistance protein TehB; Provisional

Probab=94.76  E-value=1.4  Score=35.43  Aligned_cols=78  Identities=13%  Similarity=0.126  Sum_probs=53.2

Q ss_pred             CCCCCEEEEcCCCChHHHHHHHHHHHcCCeEEEEeCCcchHHHHHHHHHhhCCCcEEEEEccCCCHHHHHHHHHHHHhHc
Q 044010           44 DVSGKVVIITGASSGIGEHLAYEYARRGACLALCARREKSLEEVADTAREIGSPDVITIRADVSKVDDCRSLVEETMNHF  123 (248)
Q Consensus        44 ~~~~k~~lVtGg~~gIG~aia~~l~~~G~~V~l~~r~~~~~~~~~~~l~~~~~~~v~~~~~D~~~~~~~~~~~~~~~~~~  123 (248)
                      ..+++++|-.|++.|.   .+..|+++|++|..++.+++..+.+.+..+..+...+.+...|+.+..        .   -
T Consensus        28 ~~~~~~vLDiGcG~G~---~a~~La~~g~~V~gvD~S~~~i~~a~~~~~~~~~~~v~~~~~d~~~~~--------~---~   93 (197)
T PRK11207         28 VVKPGKTLDLGCGNGR---NSLYLAANGFDVTAWDKNPMSIANLERIKAAENLDNLHTAVVDLNNLT--------F---D   93 (197)
T ss_pred             cCCCCcEEEECCCCCH---HHHHHHHCCCEEEEEeCCHHHHHHHHHHHHHcCCCcceEEecChhhCC--------c---C
Confidence            3456789999988765   446677889999999998877776666655544334666667764321        1   1


Q ss_pred             CCccEEEEcccc
Q 044010          124 GRLDHLVNNAGI  135 (248)
Q Consensus       124 g~id~vv~~ag~  135 (248)
                      +.+|+++.+...
T Consensus        94 ~~fD~I~~~~~~  105 (197)
T PRK11207         94 GEYDFILSTVVL  105 (197)
T ss_pred             CCcCEEEEecch
Confidence            369999877543

>cd08248 RTN4I1 Human Reticulon 4 Interacting Protein 1

Probab=94.76  E-value=0.27  Score=42.80  Aligned_cols=76  Identities=22%  Similarity=0.338  Sum_probs=48.6

Q ss_pred             CCCCEEEEcCCCChHHHHHHHHHHHcCCeEEEEeCCcchHHHHHHHHHhhCCCcEEEEEccCCCHHHHHHHHHHHHhHcC
Q 044010           45 VSGKVVIITGASSGIGEHLAYEYARRGACLALCARREKSLEEVADTAREIGSPDVITIRADVSKVDDCRSLVEETMNHFG  124 (248)
Q Consensus        45 ~~~k~~lVtGg~~gIG~aia~~l~~~G~~V~l~~r~~~~~~~~~~~l~~~~~~~v~~~~~D~~~~~~~~~~~~~~~~~~g  124 (248)
                      .+|.+++|+|+++++|.++++.....|++|+.+.++ ++ .+   .+++.+. +   ...|..+.+..+.    +.+ .+
T Consensus       161 ~~g~~vlI~g~~g~ig~~~~~~a~~~G~~v~~~~~~-~~-~~---~~~~~g~-~---~~~~~~~~~~~~~----l~~-~~  226 (350)
T cd08248         161 AAGKRVLILGGSGGVGTFAIQLLKAWGAHVTTTCST-DA-IP---LVKSLGA-D---DVIDYNNEDFEEE----LTE-RG  226 (350)
T ss_pred             CCCCEEEEECCCChHHHHHHHHHHHCCCeEEEEeCc-ch-HH---HHHHhCC-c---eEEECCChhHHHH----HHh-cC
Confidence            358999999999999999999888889998887764 22 12   2222232 1   1223333332222    222 25


Q ss_pred             CccEEEEccc
Q 044010          125 RLDHLVNNAG  134 (248)
Q Consensus       125 ~id~vv~~ag  134 (248)
                      .+|.++++.|
T Consensus       227 ~vd~vi~~~g  236 (350)
T cd08248         227 KFDVILDTVG  236 (350)
T ss_pred             CCCEEEECCC
Confidence            7999998876

Human Reticulon 4 Interacting Protein 1 is a member of the medium chain dehydrogenase/ reductase (MDR) family. Riticulons are endoplasmic reticulum associated proteins involved in membrane trafficking and neuroendocrine secretion. The MDR/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P) binding-Rossmann fold domain of a beta-alpha form and an N-terminal catalytic domain with distant homology to GroES.

>cd05292 LDH_2 A subgroup of L-lactate dehydrogenases

Probab=94.73  E-value=0.99  Score=39.15  Aligned_cols=112  Identities=17%  Similarity=0.089  Sum_probs=64.9

Q ss_pred             EEEEcCCCChHHHHHHHHHHHcC--CeEEEEeCCcchHHHHHHHHHhhCC--CcEEEEEccCCCHHHHHHHHHHHHhHcC
Q 044010           49 VVIITGASSGIGEHLAYEYARRG--ACLALCARREKSLEEVADTAREIGS--PDVITIRADVSKVDDCRSLVEETMNHFG  124 (248)
Q Consensus        49 ~~lVtGg~~gIG~aia~~l~~~G--~~V~l~~r~~~~~~~~~~~l~~~~~--~~v~~~~~D~~~~~~~~~~~~~~~~~~g  124 (248)
                      ++.|.|+ |.+|..++..|+.+|  .+|++.++++++.+.....+.....  .......   .+.           +.+.
T Consensus         2 kI~IIGa-G~VG~~~a~~l~~~g~~~ev~l~D~~~~~~~g~a~dl~~~~~~~~~~~i~~---~d~-----------~~l~   66 (308)
T cd05292           2 KVAIVGA-GFVGSTTAYALLLRGLASEIVLVDINKAKAEGEAMDLAHGTPFVKPVRIYA---GDY-----------ADCK   66 (308)
T ss_pred             EEEEECC-CHHHHHHHHHHHHcCCCCEEEEEECCchhhhhHHHHHHccccccCCeEEee---CCH-----------HHhC
Confidence            4677887 899999999999999  5899999998766543333332211  1122121   122           1234


Q ss_pred             CccEEEEccccCCcccccccCChHHHHHHHHhhhHHHHHHHHHHhhhhhhcCCeEEEEcC
Q 044010          125 RLDHLVNNAGISSVALFEDIVNITDFKQIMNINFWGSVYTTRFAVPHLRYTKGKIVVLSS  184 (248)
Q Consensus       125 ~id~vv~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~g~iV~isS  184 (248)
                      +.|++|.++|.....   .    ++..+.+..|..-.-.+.+.+..+  ..+|.+++++.
T Consensus        67 ~aDiViita~~~~~~---~----~~r~dl~~~n~~i~~~~~~~l~~~--~~~giiiv~tN  117 (308)
T cd05292          67 GADVVVITAGANQKP---G----ETRLDLLKRNVAIFKEIIPQILKY--APDAILLVVTN  117 (308)
T ss_pred             CCCEEEEccCCCCCC---C----CCHHHHHHHHHHHHHHHHHHHHHH--CCCeEEEEecC
Confidence            799999999975322   1    122334444544443344443332  12467777754

L-lactate dehydrogenases (LDH) are tetrameric enzymes catalyzing the last step of glycolysis in which pyruvate is converted to L-lactate. This subgroup is composed predominantly of bacterial LDHs and a few fungal LDHs. Bacterial LDHs may be non-allosteric or may be activated by an allosteric effector such as fructose-1,6-bisphosphate. LDHs are part of the NAD(P)-binding Rossmann fold superfamily, which includes a wide variety of protein families including the NAD(P)-binding domains of alcohol dehydrogenases, tyrosine-dependent oxidoreductases, glyceraldehyde-3-phosphate dehydrogenases, formate/glycerate dehydrogenases, siroheme synthases, 6-phosphogluconate dehydrogenases, aminoacid dehydrogenases, repressor rex, and NAD-binding potassium channel domains, among others.

>PRK11873 arsM arsenite S-adenosylmethyltransferase; Reviewed

Probab=94.73  E-value=0.47  Score=40.16  Aligned_cols=80  Identities=18%  Similarity=0.191  Sum_probs=51.5

Q ss_pred             CCCEEEEcCCCChHHHHHHHHHHHcCCeEEEEeCCcchHHHHHHHHHhhCCCcEEEEEccCCCHHHHHHHHHHHHhHcCC
Q 044010           46 SGKVVIITGASSGIGEHLAYEYARRGACLALCARREKSLEEVADTAREIGSPDVITIRADVSKVDDCRSLVEETMNHFGR  125 (248)
Q Consensus        46 ~~k~~lVtGg~~gIG~aia~~l~~~G~~V~l~~r~~~~~~~~~~~l~~~~~~~v~~~~~D~~~~~~~~~~~~~~~~~~g~  125 (248)
                      .|+++|..|+++|.-...+.+......+|+.++.++...+.+.+.....+...+.++..|+.+..        .  .-+.
T Consensus        77 ~g~~VLDiG~G~G~~~~~~a~~~g~~~~v~gvD~s~~~l~~A~~~~~~~g~~~v~~~~~d~~~l~--------~--~~~~  146 (272)
T PRK11873         77 PGETVLDLGSGGGFDCFLAARRVGPTGKVIGVDMTPEMLAKARANARKAGYTNVEFRLGEIEALP--------V--ADNS  146 (272)
T ss_pred             CCCEEEEeCCCCCHHHHHHHHHhCCCCEEEEECCCHHHHHHHHHHHHHcCCCCEEEEEcchhhCC--------C--CCCc
Confidence            68899999988765433322222233479999999888777776665554446777777764321        0  1147


Q ss_pred             ccEEEEcccc
Q 044010          126 LDHLVNNAGI  135 (248)
Q Consensus       126 id~vv~~ag~  135 (248)
                      +|+++.+...
T Consensus       147 fD~Vi~~~v~  156 (272)
T PRK11873        147 VDVIISNCVI  156 (272)
T ss_pred             eeEEEEcCcc
Confidence            8999877644

---

Homologous Structure Templates

Structure Templates Detected by BLAST

Original result of BLAST against Protein Data Bank

ID	Length	Definition	E-value
Query	248
1y5m_A	276	The Crystal Structure Of Murine 11b-Hydroxysteroid		4e-20
2jap_A	247	Clavulanic Acid Dehydrogenase: Structural And Bioch		7e-20
2cfc_A	250	Structural Basis For Stereo Selectivity In The (R)-		7e-20
3gmd_A	264	Structure-Based Design Of 7-Azaindole-Pyrrolidines		1e-19
2uvd_A	246	The Crystal Structure Of A 3-Oxoacyl-(Acyl Carrier		4e-19
2jah_A	247	Biochemical And Structural Analysis Of The Clavulan		4e-19
2irw_A	264	Human 11-Beta-Hydroxysteroid Dehydrogenase (Hsd1) W		9e-18
3d5q_A	272	Crystal Structure Of 11b-Hsd1 In Complex With Triaz		9e-18
2bel_A	283	Structure Of Human 11-Beta-Hydroxysteroid Dehydroge		9e-18
2rbe_A	275	The Discovery Of 2-Anilinothiazolones As 11beta-Hsd		1e-17
3pdj_A	273	Crystal Structure Of Human 11-Beta-Hydroxysteroid D		1e-17
3r1i_A	276	Crystal Structure Of A Short-Chain Type Dehydrogena		1e-17
1xu7_A	286	Crystal Structure Of The Interface Open Conformatio		1e-17
3ch6_A	286	Crystal Structure Of 11beta-Hsd1 Double Mutant (L26		1e-17
2ilt_A	275	Human 11-Beta-Hydroxysteroid Dehydrogenase (Hsd1) W		1e-17
4bb5_A	292	Free-Wilson And Structural Approaches To Co-Optimis		1e-17
4bb6_A	292	Free-Wilson And Structural Approaches To Co-Optimis		2e-17
4hfr_A	272	Human 11beta-Hydroxysteroid Dehydrogenase Type 1 In		2e-17
3rih_A	293	Crystal Structure Of A Putative Short Chain Dehydro		3e-17
3lz6_A	263	Guinea Pig 11beta Hydroxysteroid Dehydrogenase With		6e-17
1xse_A	295	Crystal Structure Of Guinea Pig 11beta-Hydroxystero		6e-17
3g49_A	277	N-(Pyridin-2-Yl) Arylsulfonamide Inhibitors Of 11b-		6e-17
3dwf_A	276	Crystal Structure Of The Guinea Pig 11beta-Hydroxys		7e-17
1g6k_A	261	Crystal Structure Of Glucose Dehydrogenase Mutant E		1e-16
1gco_A	261	Crystal Structure Of Glucose Dehydrogenase Complexe		2e-16
1gee_A	261	Crystal Structure Of Glucose Dehydrogenase Mutant Q		2e-16
3enn_A	249	2.1a Crystal Structure Of GlucoseRIBITOL DEHYDROGEN		2e-16
3emk_A	246	2.5a Crystal Structure Of GlucoseRIBITOL DEHYDROGEN		2e-16
1vl8_A	267	Crystal Structure Of Gluconate 5-dehydrogenase (tm0		3e-16
1ybv_A	283	Structure Of Trihydroxynaphthalene Reductase In Com		4e-16
1doh_A	283	Structure Of Trihydroxynaphthalene Reductase In Com		4e-16
1rwb_A	261	Cooperative Effect Of Two Surface Amino Acid Mutati		7e-16
3sj7_A	252	Structure Of Beta-Ketoacetyl-Coa Reductase (Fabg) F		1e-15
1yde_A	270	Crystal Structure Of Human Retinal Short-Chain Dehy		2e-15
1spx_A	278	Crystal Structure Of Glucose Dehydrogenase Of Caeno		2e-15
3n74_A	261	Crystal Structure Of 3-Ketoacyl-(Acyl-Carrier-Prote		3e-15
3tfo_A	264	Crystal Structure Of A Putative 3-Oxoacyl-(Acyl-Car		3e-15
3ay6_A	269	Crystal Structure Of Bacillus Megaterium Glucose De		4e-15
3aus_A	269	Crystal Structure Of Bacillus Megaterium Glucose De		4e-15
2hq1_A	247	Crystal Structure Of Orf 1438 A Putative GlucoseRIB		4e-15
3ay7_A	269	Crystal Structure Of Bacillus Megaterium Glucose De		4e-15
2ztm_A	260	T190s Mutant Of D-3-Hydroxybutyrate Dehydrogenase L		1e-14
2ew8_A	249	Crystal Structure Of The (s)-specific 1-phenylethan		1e-14
3osu_A	246	Crystal Structure Of The 3-Oxoacyl-Acyl Carrier Pro		1e-14
3f9i_A	249	Crystal Structure Of 3-Ketoacyl-(Acyl-Carrier-Prote		1e-14
3is3_A	270	Crystal Structure Of 17beta-Hydroxysteroid Dehydrog		2e-14
2ztu_A	260	T190a Mutant Of D-3-Hydroxybutyrate Dehydrogenase C		2e-14
1hdc_A	254	Mechanism Of Inhibition Of 3alpha,20beta-Hydroxyste		2e-14
1wmb_A	260	Crystal Structure Of Nad Dependent D-3-Hydroxybutyl		2e-14
2hsd_A	253	The Refined Three-Dimensional Structure Of 3alpha,2		2e-14
4fn4_A	254	Short-chain Nad(h)-dependent Dehydrogenase/reductas		3e-14
4dml_A	269	3-Oxoacyl-[acyl-Carrier-Protein] Reductase From Syn		3e-14
3rku_A	287	Substrate Fingerprint And The Structure Of Nadp+ De		4e-14
1yb1_A	272	Crystal Structure Of Human 17-Beta-Hydroxysteroid D		4e-14
3grp_A	266	2.1 Angstrom Crystal Structure Of 3-Ketoacyl-(Acyl-		5e-14
3itd_A	270	Crystal Structure Of An Inactive 17beta-Hydroxyster		5e-14
1edo_A	244	The X-Ray Structure Of Beta-Keto Acyl Carrier Prote		5e-14
3ftp_A	270	Crystal Structure Of 3-Ketoacyl-(Acyl-Carrier-Prote		7e-14
3nug_A	247	Crystal Structure Of Wild Type Tetrameric Pyridoxal		7e-14
1xkq_A	280	Crystal Structure Of Short-Chain DehydrogenaseREDUC		8e-14
2zk7_A	257	Structure Of A C-Terminal Deletion Mutant Of Thermo		2e-13
3ged_A	247	Fingerprint And Structural Analysis Of A Apo Scor E		3e-13
2dtd_A	264	Structure Of Thermoplasma Acidophilum Aldohexose De		3e-13
1nxq_A	251	Crystal Structure Of R-Alcohol Dehydrogenase (Radh)		3e-13
1zjy_A	251	Structure Of R-Specific Alcohol Dehydrogenase (Muta		3e-13
1ja9_A	274	Crystal Structure Of 1,3,6,8-Tetrahydroxynaphthalen		3e-13
3u5t_A	267	The Crystal Structure Of 3-Oxoacyl-[acyl-Carrier-Pr		3e-13
3tjr_A	301	Crystal Structure Of A Rv0851c Ortholog Short Chain		5e-13
3tsc_A	277	Crystal Structure Of Short Chain Dehydrogenase Map_		5e-13
1ae1_A	273	Tropinone Reductase-I Complex With Nadp Length = 27		5e-13
1ipe_A	259	Tropinone Reductase-Ii Complexed With Nadph Length		5e-13
3qiv_A	253	Crystal Structure Of A Putative Short-Chain Dehydro		6e-13
2ae2_A	260	Tropinone Reductase-Ii Complexed With Nadp+ And Pse		6e-13
3v2g_A	271	Crystal Structure Of A DehydrogenaseREDUCTASE FROM		6e-13
4iqg_C	271	Crystal Structure Of Bpro0239 Oxidoreductase From P		7e-13
3uf0_A	273	Crystal Structure Of A Putative Nad(P) Dependent Gl		8e-13
3ai1_A	263	The Crystal Structure Of L-Sorbose Reductase From G		9e-13
3ndr_A	247	Crystal Structure Of Tetrameric Pyridoxal 4-Dehydro		1e-12
1xhl_A	297	Crystal Structure Of Putative Tropinone Reductase-I		1e-12
3ai3_A	263	The Crystal Structure Of L-Sorbose Reductase From G		1e-12
2bgk_A	278	X-Ray Structure Of Apo-Secoisolariciresinol Dehydro		2e-12
3oec_A	317	Crystal Structure Of Carveol Dehydrogenase From Myc		2e-12
2ph3_A	245	Crystal Structure Of 3-oxoacyl-[acyl Carrier Protei		2e-12
1bdb_A	277	Cis-Biphenyl-2,3-Dihydrodiol-2,3-Dehydrogenase From		3e-12
3un1_A	260	Crystal Structure Of An Oxidoreductase From Sinorhi		3e-12
3v8b_A	283	Crystal Structure Of A 3-Ketoacyl-Acp Reductase Fro		3e-12
2y93_A	281	Crystal Structure Of Cis-Biphenyl-2,3-Dihydrodiol-2		3e-12
2zat_A	260	Crystal Structure Of A Mammalian Reductase Length =		4e-12
2c07_A	285	Oxoacyl-Acp Reductase Of Plasmodium Falciparum Leng		4e-12
2nm0_A	253	Crystal Structure Of Sco1815: A Beta-Ketoacyl-Acyl		4e-12
3pk0_A	262	Crystal Structure Of Short-Chain DehydrogenaseREDUC		5e-12
3o4r_A	261	Crystal Structure Of Human DehydrogenaseREDUCTASE (		6e-12
4b79_A	242	The Aeropath Project And Pseudomonas Aeruginosa Hig		7e-12
1i01_A	244	Crystal Structure Of Beta-Ketoacyl [acyl Carrier Pr		1e-11
3v1t_C	462	Crystal Structure Of A Putative Ketoacyl Reductase		1e-11
3uve_A	286	Crystal Structure Of Carveol Dehydrogenase ((+)-Tra		1e-11
4dqx_A	277	Crystal Structure Of A Short Chain Dehydrogenase Fr		1e-11
3lls_A	475	Crystal Structure Of 3-Ketoacyl-(Acyl-Carrier-Prote		2e-11
3gvc_A	277	Crystal Structure Of Probable Short-Chain Dehydroge		2e-11
4fw8_A	454	Crystal Structure Of Fabg4 Complexed With Coenzyme		2e-11
3q6i_A	446	Crystal Structure Of Fabg4 And Coenzyme Binary Comp		2e-11
3m1l_A	432	Crystal Strucutre Of A C-Terminal Trunacted Mutant		2e-11
1zem_A	262	Crystal Structure Of Nad+-Bound Xylitol Dehydrogena		2e-11
4da9_A	280	Crystal Structure Of Putative Short-Chain Dehydroge		2e-11
3t7c_A	299	Crystal Structure Of Carveol Dehydrogenase From Myc		2e-11
2bd0_A	244	Chlorobium Tepidum Sepiapterin Reductase Complexed		3e-11
4dyv_A	272	Crystal Structure Of A Short-Chain DehydrogenaseRED		4e-11
3v2h_A	281	The Crystal Structure Of D-Beta-Hydroxybutyrate Deh		4e-11
1q7c_A	244	The Structure Of Betaketoacyl-[acp] Reductase Y151f		4e-11
1uls_A	245	Crystal Structure Of Tt0140 From Thermus Thermophil		4e-11
1geg_A	256	Cryatal Structure Analysis Of Meso-2,3-Butanediol D		4e-11
4afn_A	269	Crystal Structure Of 3-ketoacyl-(acyl-carrier-prote		5e-11
4e6p_A	259	Crystal Structure Of A Probable Sorbitol Dehydrogen		7e-11
3rsh_A	251	Structure Of 3-Ketoacyl-(Acyl-Carrier-Protein)reduc		7e-11
3imf_A	257	1.99 Angstrom Resolution Crystal Structure Of A Sho		7e-11
2gdz_A	267	Crystal Structure Of 15-Hydroxyprostaglandin Dehydr		8e-11
3pgx_A	280	Crystal Structure Of A Putative Carveol Dehydrogena		1e-10
3u0b_A	454	Crystal Structure Of An Oxidoreductase From Mycobac		1e-10
3ioy_A	319	Structure Of Putative Short-Chain Dehydrogenase (Sa		1e-10
2nwq_A	272	Short Chain Dehydrogenase From Pseudomonas Aerugino		1e-10
3ucx_A	264	The Structure Of A Short Chain Dehydrogenase From M		2e-10
4eso_A	255	Crystal Structure Of A Putative Oxidoreductase Prot		2e-10
3vc7_A	254	Crystal Structure Of A Putative Oxidoreductase From		2e-10
3ak4_A	263	Crystal Structure Of Nadh-Dependent Quinuclidinone		2e-10
3tzc_A	251	Crystal Structure Of 3-Ketoacyl-(Acyl-Carrier-Prote		2e-10
3kzv_A	254	The Crystal Structure Of A Cytoplasmic Protein With		3e-10
3cxr_A	291	Crystal Structure Of Gluconate 5-Dehydrogase From S		3e-10
3m1a_A	281	The Crystal Structure Of A Short-Chain Dehydrogenas		4e-10
2pnf_A	248	Structure Of Aquifex Aeolicus Fabg 3-oxoacyl-(acyl-		4e-10
3tzk_A	251	Crystal Structure Of 3-Ketoacyl-(Acyl-Carrier-Prote		5e-10
2b4q_A	276	Pseudomonas Aeruginosa RhlgNADP ACTIVE-Site Complex		5e-10
3o38_A	266	Crystal Structure Of A Short Chain Dehydrogenase Fr		6e-10
3tzh_A	251	Crystal Structure Of 3-Ketoacyl-(Acyl-Carrier-Prote		7e-10
3u09_A	251	Crystal Structure Of 3-Ketoacyl-(Acyl-Carrier-Prote		8e-10
2qq5_A	260	Crystal Structure Of Human Sdr Family Member 1 Leng		8e-10
3uwr_A	286	Crystal Structure Of Carveol Dehydrogenase From Myc		1e-09
2et6_A	604	(3r)-Hydroxyacyl-Coa Dehydrogenase Domain Of Candid		1e-09
3i3o_A	291	2.06 Angstrom Resolution Crystal Structure Of A Sho		2e-09
3icc_A	255	Crystal Structure Of A Putative 3-Oxoacyl-(Acyl Car		2e-09
3vtz_A	269	Structure Of Thermoplasma Volcanium Aldohexose Dehy		2e-09
3ijr_A	291	2.05 Angstrom Resolution Crystal Structure Of A Sho		2e-09
2q2q_A	255	Structure Of D-3-Hydroxybutyrate Dehydrogenase From		2e-09
3asu_A	248	Crystal Structure Of Serine Dehydrogenase From Esch		2e-09
2cf2_E	226	Architecture Of Mammalian Fatty Acid Synthase Lengt		3e-09
2a4k_A	263	3-Oxoacyl-[acyl Carrier Protein] Reductase From The		4e-09
4e3z_A	272	Crystal Structure Of A Oxidoreductase From Rhizobiu		4e-09
1k2w_A	256	Crystal Structure Of Sorbitol Dehydrogenase From R.		4e-09
2fwm_X	250	Crystal Structure Of E. Coli Enta, A 2,3-Dihydrodih		7e-09
1hxh_A	253	Comamonas Testosteroni 3beta17BETA HYDROXYSTEROID D		7e-09
3ctm_A	279	Crystal Structure Of A Carbonyl Reductase From Cand		9e-09
1xg5_A	279	Structure Of Human Putative Dehydrogenase Mgc4172 I		9e-09
1ahi_A	255	7 Alpha-Hydroxysteroid Dehydrogenase Complexed With		1e-08
4fgs_A	273	Crystal Structure Of A Probable Dehydrogenase Prote		1e-08
2ehd_A	234	Crystal Structure Analysis Of Oxidoreductase Length		2e-08
2d1y_A	256	Crystal Structure Of Tt0321 From Thermus Thermophil		2e-08
3op4_A	248	Crystal Structure Of Putative 3-Ketoacyl-(Acyl-Carr		2e-08
3i4f_A	264	Structure Of Putative 3-oxoacyl-reductase From Baci		2e-08
1zbq_A	327	Crystal Structure Of Human 17-beta-hydroxysteroid D		2e-08
4dc1_A	281	Crystal Structure Of Y202f Actinorhodin Polyketide		2e-08
3lyl_A	247	Structure Of 3-Oxoacyl-Acylcarrier Protein Reductas		2e-08
1w4z_A	281	Structure Of Actinorhodin Polyketide (Actiii) Reduc		3e-08
1x7g_A	261	Actinorhodin Polyketide Ketoreductase, Act Kr, With		3e-08
2rh4_A	277	Actinorhodin Ketoreductase, Actkr, With Nadph And I		3e-08
2ntn_A	267	Crystal Structure Of Maba-c60v/g139a/s144l Length =		3e-08
1uzl_A	247	Maba From Mycobacterium Tuberculosis Length = 247		3e-08
3tox_A	280	Crystal Structure Of A Short Chain Dehydrogenase In		3e-08
4dbz_A	281	Crystal Structure Of V151l Actinorhodin Polyketide		3e-08
1uzm_A	247	Maba From Mycobacterium Tuberculosis Length = 247		4e-08
2yz7_A	260	X-Ray Analyses Of 3-Hydroxybutyrate Dehydrogenase F		4e-08
3csd_B	281	Actinorhodin Polyketide Ketoreductase Mutant P94l B		5e-08
2rhr_B	277	P94l Actinorhodin Ketordeuctase Mutant, With Nadph		6e-08
2pd6_A	264	Structure Of Human Hydroxysteroid Dehydrogenase Typ		7e-08
1nff_A	260	Crystal Structure Of Rv2002 Gene Product From Mycob		8e-08
3sx2_A	278	Crystal Structure Of A Putative 3-Ketoacyl-(Acyl-Ca		9e-08
4dc0_A	281	Crystal Structure Of F189w Actinorhodin Polyketide		1e-07
1a27_A	289	Human 17-Beta-Hydroxysteroid-Dehydrogenase Type 1 C		1e-07
3oml_A	613	Structure Of Full-Length Peroxisomal Multifunctiona		1e-07
3gaf_A	256	2.2a Crystal Structure Of 7-Alpha-Hydroxysteroid De		1e-07
1fdu_A	327	Human 17-Beta-Hydroxysteroid-Dehydrogenase Type 1 M		1e-07
1fdw_A	327	Human 17-Beta-Hydroxysteroid-Dehydrogenase Type 1 M		1e-07
1fds_A	327	Human 17-Beta-Hydroxysteroid-Dehydrogenase Type 1 C		1e-07
1equ_A	327	Type 1 17-Beta Hydroxysteroid Dehydrogenase Equilin		1e-07
3p19_A	266	Improved Nadph-Dependent Blue Fluorescent Protein L		1e-07
3afm_A	258	Crystal Structure Of Aldose Reductase A1-R Responsi		2e-07
1nfr_A	260	Rv2002 Gene Product From Mycobacterium Tuberculosis		2e-07
1iy8_A	267	Crystal Structure Of Levodione Reductase Length = 2		2e-07
1iol_A	327	Estrogenic 17-beta Hydroxysteroid Dehydrogenase Com		2e-07
1gz6_A	319	(3r)-Hydroxyacyl-Coa Dehydrogenase Fragment Of Rat		3e-07
1h5q_A	265	Mannitol Dehydrogenase From Agaricus Bisporus Lengt		3e-07
3s55_A	281	Crystal Structure Of A Putative Short-Chain Dehydro		3e-07
3r3s_A	294	Structure Of The Ygha Oxidoreductase From Salmonell		3e-07
1yxm_A	303	Crystal Structure Of Peroxisomal Trans 2-Enoyl Coa		4e-07
4iiu_A	267	Crystal Structure Of A Putative 3-Oxoacyl-[acyl-Car		6e-07
3gk3_A	269	Crystal Structure Of Acetoacetyl-Coa Reductase From		6e-07
4gkb_A	258	Crystal Structure Of A Short Chain Dehydrogenase Ho		7e-07
1xq1_A	266	X-Ray Structure Of Putative Tropinone Reducatse Fro		9e-07
3f5q_A	262	Crystal Structure Of Putative Short Chain Dehydroge		9e-07
3f5s_A	255	Crystal Structure Of Putatitve Short Chain Dehydrog		1e-06
3t4x_A	267	Short Chain DehydrogenaseREDUCTASE FAMILY OXIDOREDU		1e-06
3rkr_A	262	Crystal Structure Of A Metagenomic Short-Chain Oxid		2e-06
1e6w_A	260	Rat Brain 3-Hydroxyacyl-Coa Dehydrogenase Binary Co		2e-06
3tzq_B	271	Crystal Structure Of A Short-Chain Type Dehydrogena		2e-06
1e3s_A	261	Rat Brain 3-Hydroxyacyl-Coa Dehydrogenase Binary Co		2e-06
1e3w_A	261	Rat Brain 3-Hydroxyacyl-Coa Dehydrogenase Binary Co		3e-06
3f1l_A	252	The 0.95 A Structure Of An Oxidoreductase, Ycik Fro		3e-06
1so8_A	261	Abeta-bound Human Abad Structure [also Known As 3-h		3e-06
1u7t_A	261	Crystal Structure Of AbadHSD10 WITH A BOUND INHIBIT		3e-06
2o23_A	265	The Structure Of Wild-Type Human Hadh2 (17beta-Hydr		3e-06
3i1j_A	247	Structure Of A Putative Short Chain Dehydrogenase F		4e-06
3l77_A	235	X-Ray Structure Alcohol Dehydrogenase From Archaeon		4e-06
3tn7_A	257	Crystal Structure Of Short-Chain Alcohol Dehydrogen		4e-06
3qlj_A	322	Crystal Structure Of A Short Chain Dehydrogenase Fr		4e-06
4iin_A	271	Crystal Structure Of A Putative 3-Oxoacyl-[acyl-Car		6e-06
3sju_A	279	Hedamycin Polyketide Ketoreductase Bound To Nadph L		7e-06
3gdf_A	267	Crystal Structure Of The Nadp-Dependent Mannitol De		1e-05
1pr9_A	244	Human L-Xylulose Reductase Holoenzyme Length = 244		1e-05
3edm_A	259	Crystal Structure Of A Short Chain Dehydrogenase Fr		2e-05
3d3w_A	244	Structure Of L-Xylulose Reductase With Bound Coenzy		2e-05
2wdz_A	254	Crystal Structure Of The Short Chain Dehydrogenase		3e-05
3g1t_A	258	Crystal Structure Of Short Chain Dehydrogenase From		4e-05
3kvo_A	346	Crystal Structure Of The Catalytic Domain Of Human		5e-05
3a28_C	258	Crystal Structure Of L-2,3-Butanediol Dehydrogenase		5e-05
3oic_A	258	Crystal Structure Of Enoyl-Acp Reductases Iii (Fabl		5e-05
3iah_A	256	Crystal Structure Of Short Chain Dehydrogenase (yci		7e-05
4e4y_A	244	The Crystal Structure Of A Short Chain Dehydrogenas		9e-05
3awd_A	260	Crystal Structure Of Gox2181 Length = 260		1e-04
3e9n_A	245	Crystal Structure Of A Putative Short-Chain Dehydro		2e-04
4hp8_A	247	Crystal Structure Of A Putative 2-Deoxy-D-Gluconate		2e-04
3f1k_A	252	Crystal Structure Of Ycik From E. Coli, An Oxidored		2e-04
4g81_D	255	Crystal Structure Of A Hexonate Dehydrogenase Ortho		2e-04
3e9q_A	273	Crystal Structure Of The Short Chain Dehydrogenase		2e-04
3nyw_A	250	Crystal Structure Of A Betaketoacyl-[acp] Reductase		3e-04
3u9l_A	324	The Crystal Structure Of 3-Oxoacyl-[acyl-Carrier-Pr		3e-04
3d3w_B	245	Structure Of L-Xylulose Reductase With Bound Coenzy		3e-04
4fc6_A	277	Studies On Dcr Shed New Light On Peroxisomal Beta-O		4e-04
2yw9_A	261	Crystal Structure Of Tt0143 From Thermus Thermophil		6e-04
4ibo_A	271	Crystal Structure Of A Putative Gluconate Dehydroge		7e-04
1cyd_A	244	Carbonyl Reductase Complexed With Nadph And 2-Propa		9e-04

>pdb|1Y5M|A Chain A, The Crystal Structure Of Murine 11b-Hydroxysteroid Dehydrogenase: An Important Therapeutic Target For Diabetes Length = 276

Iteration: 1
 Score = 95.1 bits (235), Expect = 4e-20,   Method: Compositional matrix adjust.
 Identities = 62/194 (31%), Positives = 99/194 (51%), Gaps = 6/194 (3%)
Query: 43  EDVSGKVVIITGASSGIGEHLAYEYXXXXXXXXXXXXXEKSLEEVADTAREIGSPDVITI 102
           E + GK VI+TGAS GIG  +AY               E+ L++V     E+G+     I
Sbjct: 14  EMLQGKKVIVTGASKGIGREMAYHLSKMGAHVVLTARSEEGLQKVVSRCLELGAASAHYI 73
Query: 103 RADVSKVDDCRSLVEETMNHFGRLDHLV-NNAGISSVALFEDIVNITDFKQIMNINFWGS 161
              +  +      + +     G LD L+ N+   +S++LF D  +I   +++M +NF   
Sbjct: 74  AGTMEDMTFAEQFIVKAGKLMGGLDMLILNHITQTSLSLFHD--DIHSVRRVMEVNFLSY 131
Query: 162 VYTTRFAVPHLRYTKGKIVVLSSAASWLTAPRMSFYNASKAALVLFFETLRVEL---GSD 218
           V  +  A+P L+ + G I V+SS A  +T P ++ Y+ASK AL  FF T+R EL     +
Sbjct: 132 VVMSTAALPMLKQSNGSIAVISSLAGKMTQPMIAPYSASKFALDGFFSTIRTELYITKVN 191
Query: 219 VGVTIVTPGFIESE 232
           V +T+   G I++E
Sbjct: 192 VSITLCVLGLIDTE 205

>pdb|2JAP|A Chain A, Clavulanic Acid Dehydrogenase: Structural And Biochemical Analysis Of The Final Step In The Biosynthesis Of The Beta- Lactamase Inhibitor Clavulanic Acid Length = 247

Iteration: 1
 Score = 94.0 bits (232), Expect = 7e-20,   Method: Compositional matrix adjust.
 Identities = 66/190 (34%), Positives = 96/190 (50%), Gaps = 3/190 (1%)
Query: 45  VSGKVVIITGASSGIGEHLAYEYXXXXXXXXXXXXXEKSLEEVADTAREIGSPDVITIRA 104
           + GKV +ITGASSGIGE  A                 + L  + D     G+  V  +  
Sbjct: 5   LQGKVALITGASSGIGEATARALAAEGAAVAIAARRVEKLRALGDELTAAGA-KVHVLEL 63
Query: 105 DVSKVDDCRSLVEETMNHFGRLDHLVNNAGISSVALFEDIVNITDFKQIMNINFWGSVYT 164
           DV+      + V  T+   G LD LVNNAGI  +   ED  + TD+ ++++ N  G +Y 
Sbjct: 64  DVADRQGVDAAVASTVEALGGLDILVNNAGIMLLGPVED-ADTTDWTRMIDTNLLGLMYM 122
Query: 165 TRFAVPHLRYTKGKIVVLSSAASWLTAPRMSFYNASKAALVLFFETLRVELGS-DVGVTI 223
           TR A+PHL  +KG +V +SS A  +     + Y A+K  +  F ETLR E+    V V +
Sbjct: 123 TRAALPHLLRSKGTVVQMSSIAGRVNVRNAAVYQATKFGVNAFSETLRQEVTERGVRVVV 182
Query: 224 VTPGFIESEL 233
           + PG  ++EL
Sbjct: 183 IEPGTTDTEL 192

>pdb|2CFC|A Chain A, Structural Basis For Stereo Selectivity In The (R)- And (S)- Hydroxypropylethane Thiosulfonate Dehydrogenases Length = 250

Iteration: 1
 Score = 94.0 bits (232), Expect = 7e-20,   Method: Compositional matrix adjust.
 Identities = 65/195 (33%), Positives = 97/195 (49%), Gaps = 4/195 (2%)
Query: 48  KVVIITGASSGIGEHLAYEYXXXXXXXXXXXXXEKSLEEVADTAREIGSPDVITIRADVS 107
           +V I+TGASSG G  +A  +              ++LEE A T     +  V+ +RADV+
Sbjct: 3   RVAIVTGASSGNGLAIATRFLARGDRVAALDLSAETLEETARTHWHAYADKVLRVRADVA 62
Query: 108 KVDDCRSLVEETMNHFGRLDHLVNNAGIS--SVALFEDIVNITDFKQIMNINFWGSVYTT 165
              D  + +  TM  FG +D LVNNAGI+  S A       +  F ++M +N  G     
Sbjct: 63  DEGDVNAAIAATMEQFGAIDVLVNNAGITGNSEAGVLHTTPVEQFDKVMAVNVRGIFLGC 122
Query: 166 RFAVPH-LRYTKGKIVVLSSAASWLTAPRMSFYNASKAALVLFFETLRVEL-GSDVGVTI 223
           R  +PH L    G IV ++S AS +  P  S Y  SK A++   +++ V+  GS +    
Sbjct: 123 RAVLPHMLLQGAGVIVNIASVASLVAFPGRSAYTTSKGAVLQLTKSVAVDYAGSGIRCNA 182
Query: 224 VTPGFIESELTQGKF 238
           V PG IE+ +TQ + 
Sbjct: 183 VCPGMIETPMTQWRL 197

>pdb|3GMD|A Chain A, Structure-Based Design Of 7-Azaindole-Pyrrolidines As Inhibitors Of 11beta-Hydroxysteroid-Dehydrogenase Type I Length = 264

Iteration: 1
 Score = 93.6 bits (231), Expect = 1e-19,   Method: Compositional matrix adjust.
 Identities = 62/194 (31%), Positives = 99/194 (51%), Gaps = 6/194 (3%)
Query: 43  EDVSGKVVIITGASSGIGEHLAYEYXXXXXXXXXXXXXEKSLEEVADTAREIGSPDVITI 102
           E + GK VI+TGAS GIG  +AY               E+ L++V     E+G+     I
Sbjct: 5   EMLQGKKVIVTGASKGIGREMAYHLSKMGAHVVLTARSEEGLQKVVSRCLELGAASAHYI 64
Query: 103 RADVSKVDDCRSLVEETMNHFGRLDHLV-NNAGISSVALFEDIVNITDFKQIMNINFWGS 161
              +  +      + +     G LD L+ N+   +S++LF D  +I   +++M +NF   
Sbjct: 65  AGTMEDMTFAEQFIVKAGKLMGGLDMLILNHITQTSLSLFHD--DIHSVRRVMEVNFLSY 122
Query: 162 VYTTRFAVPHLRYTKGKIVVLSSAASWLTAPRMSFYNASKAALVLFFETLRVEL---GSD 218
           V  +  A+P L+ + G I V+SS A  +T P ++ Y+ASK AL  FF T+R EL     +
Sbjct: 123 VVMSTAALPMLKQSNGSIAVISSLAGKVTYPMVAPYSASKFALDGFFSTIRTELYITKVN 182
Query: 219 VGVTIVTPGFIESE 232
           V +T+   G I++E
Sbjct: 183 VSITLCVLGLIDTE 196

>pdb|2UVD|A Chain A, The Crystal Structure Of A 3-Oxoacyl-(Acyl Carrier Protein) Reductase From Bacillus Anthracis (Ba3989) Length = 246

Iteration: 1
 Score = 91.7 bits (226), Expect = 4e-19,   Method: Compositional matrix adjust.
 Identities = 62/194 (31%), Positives = 105/194 (54%), Gaps = 7/194 (3%)
Query: 45  VSGKVVIITGASSGIGEHLAYEYXXXXXXXXXX-XXXEKSLEEVADTAREIGSPDVITIR 103
           + GKV ++TGAS GIG  +A +               E+   EV D  +++GS D I +R
Sbjct: 2   LKGKVALVTGASRGIGRAIAIDLAKQGANVVVNYAGNEQKANEVVDEIKKLGS-DAIAVR 60
Query: 104 ADVSKVDDCRSLVEETMNHFGRLDHLVNNAGISSVALFEDIVNITDFKQIMNINFWGSVY 163
           ADV+  +D  ++V++T++ FG++D LVNNAG++   L   +    ++  ++N N  G   
Sbjct: 61  ADVANAEDVTNMVKQTVDVFGQVDILVNNAGVTKDNLLMRMKE-EEWDTVINTNLKGVFL 119
Query: 164 TTRFAVPH--LRYTKGKIVVLSSAASWLTAPRMSFYNASKAALVLFFETLRVELGS-DVG 220
            T+ AV    +R   G+IV ++S       P  + Y A+KA ++   +T   EL S ++ 
Sbjct: 120 CTK-AVSRFMMRQRHGRIVNIASVVGVTGNPGQANYVAAKAGVIGLTKTSAKELASRNIT 178
Query: 221 VTIVTPGFIESELT 234
           V  + PGFI +++T
Sbjct: 179 VNAIAPGFIATDMT 192

>pdb|2JAH|A Chain A, Biochemical And Structural Analysis Of The Clavulanic Acid Dehydeogenase (Cad) From Streptomyces Clavuligerus Length = 247

Iteration: 1
 Score = 91.7 bits (226), Expect = 4e-19,   Method: Compositional matrix adjust.
 Identities = 66/190 (34%), Positives = 93/190 (48%), Gaps = 3/190 (1%)
Query: 45  VSGKVVIITGASSGIGEHLAYEYXXXXXXXXXXXXXEKSLEEVADTAREIGSPDVITIRA 104
           + GKV +ITGASSGIGE  A                 + L  + D     G+  V  +  
Sbjct: 5   LQGKVALITGASSGIGEATARALAAEGAAVAIAARRVEKLRALGDELTAAGA-KVHVLEL 63
Query: 105 DVSKVDDCRSLVEETMNHFGRLDHLVNNAGISSVALFEDIVNITDFKQIMNINFWGSVYT 164
           DV+      + V  T+   G LD LVNNAGI  +   ED  + TD+ + ++ N  G  Y 
Sbjct: 64  DVADRQGVDAAVASTVEALGGLDILVNNAGIXLLGPVED-ADTTDWTRXIDTNLLGLXYX 122
Query: 165 TRFAVPHLRYTKGKIVVLSSAASWLTAPRMSFYNASKAALVLFFETLRVELGS-DVGVTI 223
           TR A+PHL  +KG +V  SS A  +     + Y A+K  +  F ETLR E+    V V +
Sbjct: 123 TRAALPHLLRSKGTVVQXSSIAGRVNVRNAAVYQATKFGVNAFSETLRQEVTERGVRVVV 182
Query: 224 VTPGFIESEL 233
           + PG  ++EL
Sbjct: 183 IEPGTTDTEL 192

>pdb|2IRW|A Chain A, Human 11-Beta-Hydroxysteroid Dehydrogenase (Hsd1) With Nadp And Adamantane Ether Inhibitor Length = 264

Iteration: 1
 Score = 87.0 bits (214), Expect = 9e-18,   Method: Compositional matrix adjust.
 Identities = 64/203 (31%), Positives = 102/203 (50%), Gaps = 7/203 (3%)
Query: 43  EDVSGKVVIITGASSGIGEHLAYEYXXXXXXXXXXXXXEKSLEEVADTAREIGSPDVITI 102
           E + GK VI+TGAS GIG  +AY               +++L++V     E+G+     I
Sbjct: 5   EMLQGKKVIVTGASKGIGREMAYHLAKMGAHVVVTARSKETLQKVVSHCLELGAASAHYI 64
Query: 103 RADVSKVDDCRSLVEETMNHFGRLDHLV-NNAGISSVALFEDIVNITDFKQIMNINFWGS 161
              +  +      V +     G LD L+ N+   +S+ LF D  +I   ++ M +NF   
Sbjct: 65  AGTMEDMTFAEQFVAQAGKLMGGLDMLILNHITNTSLNLFHD--DIHHVRKSMEVNFLSY 122
Query: 162 VYTTRFAVPHLRYTKGKIVVLSSAASWLTAPRMSFYNASKAALVLFFETLRVELG---SD 218
           V  T  A+P L+ + G IVV+SS A  +  P ++ Y+ASK AL  FF ++R E      +
Sbjct: 123 VVLTVAALPMLKQSNGSIVVVSSLAGKVAYPMVAAYSASKFALDGFFSSIRKEYSVSRVN 182
Query: 219 VGVTIVTPGFIESELTQGKFLTG 241
           V +T+   G I++E T  K ++G
Sbjct: 183 VSITLCVLGLIDTE-TAMKAVSG 204

>pdb|3D5Q|A Chain A, Crystal Structure Of 11b-Hsd1 In Complex With Triazole Inhibitor Length = 272

Iteration: 1
 Score = 87.0 bits (214), Expect = 9e-18,   Method: Compositional matrix adjust.
 Identities = 64/203 (31%), Positives = 102/203 (50%), Gaps = 7/203 (3%)
Query: 43  EDVSGKVVIITGASSGIGEHLAYEYXXXXXXXXXXXXXEKSLEEVADTAREIGSPDVITI 102
           E + GK VI+TGAS GIG  +AY               +++L++V     E+G+     I
Sbjct: 10  EMLQGKKVIVTGASKGIGREMAYHLAKMGAHVVVTARSKETLQKVVSHCLELGAASAHYI 69
Query: 103 RADVSKVDDCRSLVEETMNHFGRLDHLV-NNAGISSVALFEDIVNITDFKQIMNINFWGS 161
              +  +      V +     G LD L+ N+   +S+ LF D  +I   ++ M +NF   
Sbjct: 70  AGTMEDMTFAEQFVAQAGKLMGGLDMLILNHITNTSLNLFHD--DIHHVRKSMEVNFLSY 127
Query: 162 VYTTRFAVPHLRYTKGKIVVLSSAASWLTAPRMSFYNASKAALVLFFETLRVELG---SD 218
           V  T  A+P L+ + G IVV+SS A  +  P ++ Y+ASK AL  FF ++R E      +
Sbjct: 128 VVLTVAALPMLKQSNGSIVVVSSLAGKVAYPMVAAYSASKFALDGFFSSIRKEYSVSRVN 187
Query: 219 VGVTIVTPGFIESELTQGKFLTG 241
           V +T+   G I++E T  K ++G
Sbjct: 188 VSITLCVLGLIDTE-TAMKAVSG 209

>pdb|2BEL|A Chain A, Structure Of Human 11-Beta-Hydroxysteroid Dehydrogenase In Complex With Nadp And Carbenoxolone Length = 283

Iteration: 1
 Score = 87.0 bits (214), Expect = 9e-18,   Method: Compositional matrix adjust.
 Identities = 61/194 (31%), Positives = 97/194 (50%), Gaps = 6/194 (3%)
Query: 43  EDVSGKVVIITGASSGIGEHLAYEYXXXXXXXXXXXXXEKSLEEVADTAREIGSPDVITI 102
           E + GK VI+TGAS GIG  +AY               +++L++V     E+G+     I
Sbjct: 27  EMLQGKKVIVTGASKGIGREMAYHLAKMGAHVVVTARSKETLQKVVSHCLELGAASAHYI 86
Query: 103 RADVSKVDDCRSLVEETMNHFGRLDHLV-NNAGISSVALFEDIVNITDFKQIMNINFWGS 161
              +  +      V +     G LD L+ N+   +S+ LF D  +I   ++ M +NF   
Sbjct: 87  AGTMEDMTFAEQFVAQAGKLMGGLDMLILNHITNTSLNLFHD--DIHHVRKSMEVNFLSY 144
Query: 162 VYTTRFAVPHLRYTKGKIVVLSSAASWLTAPRMSFYNASKAALVLFFETLRVELG---SD 218
           V  T  A+P L+ + G IVV+SS A  +  P ++ Y+ASK AL  FF ++R E      +
Sbjct: 145 VVLTVAALPMLKQSNGSIVVVSSLAGKVAYPMVAAYSASKFALDGFFSSIRKEYSVSRVN 204
Query: 219 VGVTIVTPGFIESE 232
           V +T+   G I++E
Sbjct: 205 VSITLCVLGLIDTE 218

>pdb|2RBE|A Chain A, The Discovery Of 2-Anilinothiazolones As 11beta-Hsd1 Inhibitors Length = 275

Iteration: 1
 Score = 87.0 bits (214), Expect = 1e-17,   Method: Compositional matrix adjust.
 Identities = 64/203 (31%), Positives = 102/203 (50%), Gaps = 7/203 (3%)
Query: 43  EDVSGKVVIITGASSGIGEHLAYEYXXXXXXXXXXXXXEKSLEEVADTAREIGSPDVITI 102
           E + GK VI+TGAS GIG  +AY               +++L++V     E+G+     I
Sbjct: 13  EMLQGKKVIVTGASKGIGREMAYHLAKMGAHVVVTARSKETLQKVVSHCLELGAASAHYI 72
Query: 103 RADVSKVDDCRSLVEETMNHFGRLDHLV-NNAGISSVALFEDIVNITDFKQIMNINFWGS 161
              +  +      V +     G LD L+ N+   +S+ LF D  +I   ++ M +NF   
Sbjct: 73  AGTMEDMTFAEQFVAQAGKLMGGLDMLILNHITNTSLNLFHD--DIHHVRKSMEVNFLSY 130
Query: 162 VYTTRFAVPHLRYTKGKIVVLSSAASWLTAPRMSFYNASKAALVLFFETLRVELG---SD 218
           V  T  A+P L+ + G IVV+SS A  +  P ++ Y+ASK AL  FF ++R E      +
Sbjct: 131 VVLTVAALPMLKQSNGSIVVVSSLAGKVAYPMVAAYSASKFALDGFFSSIRKEYSVSRVN 190
Query: 219 VGVTIVTPGFIESELTQGKFLTG 241
           V +T+   G I++E T  K ++G
Sbjct: 191 VSITLCVLGLIDTE-TAMKAVSG 212

>pdb|3PDJ|A Chain A, Crystal Structure Of Human 11-Beta-Hydroxysteroid Dehydrogenase 1 (11b-Hsd1) In Complex With 4,4-Disubstituted Cyclohexylbenzamide Inhibitor Length = 273

Iteration: 1
 Score = 87.0 bits (214), Expect = 1e-17,   Method: Compositional matrix adjust.
 Identities = 61/194 (31%), Positives = 97/194 (50%), Gaps = 6/194 (3%)
Query: 43  EDVSGKVVIITGASSGIGEHLAYEYXXXXXXXXXXXXXEKSLEEVADTAREIGSPDVITI 102
           E + GK VI+TGAS GIG  +AY               +++L++V     E+G+     I
Sbjct: 11  EMLQGKKVIVTGASKGIGREMAYHLAKMGAHVVVTARSKETLQKVVSHCLELGAASAHYI 70
Query: 103 RADVSKVDDCRSLVEETMNHFGRLDHLV-NNAGISSVALFEDIVNITDFKQIMNINFWGS 161
              +  +      V +     G LD L+ N+   +S+ LF D  +I   ++ M +NF   
Sbjct: 71  AGTMEDMTFAEQFVAQAGKLMGGLDMLILNHITNTSLNLFHD--DIHHVRKSMEVNFLSY 128
Query: 162 VYTTRFAVPHLRYTKGKIVVLSSAASWLTAPRMSFYNASKAALVLFFETLRVELG---SD 218
           V  T  A+P L+ + G IVV+SS A  +  P ++ Y+ASK AL  FF ++R E      +
Sbjct: 129 VVLTVAALPMLKQSNGSIVVVSSLAGKVAYPMVAAYSASKFALDGFFSSIRKEYSVSRVN 188
Query: 219 VGVTIVTPGFIESE 232
           V +T+   G I++E
Sbjct: 189 VSITLCVLGLIDTE 202

>pdb|3R1I|A Chain A, Crystal Structure Of A Short-Chain Type DehydrogenaseREDUCTASE FROM Mycobacterium Marinum Length = 276

Iteration: 1
 Score = 86.7 bits (213), Expect = 1e-17,   Method: Compositional matrix adjust.
 Identities = 61/197 (30%), Positives = 100/197 (50%), Gaps = 7/197 (3%)
Query: 44  DVSGKVVIITGASSGIGEHLAYEYXXXXXXXXXXXXXEKSLEEVADTAREIGSPDVITIR 103
           D+SGK  +ITGAS+GIG+ +A  Y               +L+ VAD    +G    + IR
Sbjct: 29  DLSGKRALITGASTGIGKKVALAYAEAGAQVAVAARHSDALQVVADEIAGVGG-KALPIR 87
Query: 104 ADVSKVDDCRSLVEETMNHFGRLDHLVNNAGISSVALFEDIVNITDFKQIMNINFWGSVY 163
            DV++ D  R ++++     G +D  V NAGI SV    D+  + +F++I + N  G   
Sbjct: 88  CDVTQPDQVRGMLDQMTGELGGIDIAVCNAGIVSVQAMLDM-PLEEFQRIQDTNVTGVFL 146
Query: 164 TTRFAVPHL--RYTKGKIVVLSSAASWL--TAPRMSFYNASKAALVLFFETLRVELGS-D 218
           T + A   +  +   G I+  +S +  +     ++S Y  SKAA+V   + + VEL    
Sbjct: 147 TAQAAARAMVDQGLGGTIITTASMSGHIINIPQQVSHYCTSKAAVVHLTKAMAVELAPHQ 206
Query: 219 VGVTIVTPGFIESELTQ 235
           + V  V+PG+I +EL +
Sbjct: 207 IRVNSVSPGYIRTELVE 223

>pdb|1XU7|A Chain A, Crystal Structure Of The Interface Open Conformation Of Tetrameric 11b-hsd1 Length = 286

Iteration: 1
 Score = 86.7 bits (213), Expect = 1e-17,   Method: Compositional matrix adjust.
 Identities = 64/203 (31%), Positives = 102/203 (50%), Gaps = 7/203 (3%)
Query: 43  EDVSGKVVIITGASSGIGEHLAYEYXXXXXXXXXXXXXEKSLEEVADTAREIGSPDVITI 102
           E + GK VI+TGAS GIG  +AY               +++L++V     E+G+     I
Sbjct: 24  EMLQGKKVIVTGASKGIGREMAYHLAKMGAHVVVTARSKETLQKVVSHCLELGAASAHYI 83
Query: 103 RADVSKVDDCRSLVEETMNHFGRLDHLV-NNAGISSVALFEDIVNITDFKQIMNINFWGS 161
              +  +      V +     G LD L+ N+   +S+ LF D  +I   ++ M +NF   
Sbjct: 84  AGTMEDMTFAEQFVAQAGKLMGGLDMLILNHITNTSLNLFHD--DIHHVRKSMEVNFLSY 141
Query: 162 VYTTRFAVPHLRYTKGKIVVLSSAASWLTAPRMSFYNASKAALVLFFETLRVELG---SD 218
           V  T  A+P L+ + G IVV+SS A  +  P ++ Y+ASK AL  FF ++R E      +
Sbjct: 142 VVLTVAALPMLKQSNGSIVVVSSLAGKVAYPMVAAYSASKFALDGFFSSIRKEYSVSRVN 201
Query: 219 VGVTIVTPGFIESELTQGKFLTG 241
           V +T+   G I++E T  K ++G
Sbjct: 202 VSITLCVLGLIDTE-TAMKAVSG 223

>pdb|3CH6|A Chain A, Crystal Structure Of 11beta-Hsd1 Double Mutant (L262r, F278e) Complexed With (3,3-Dimethylpiperidin-1-Yl)(6-(3- Fluoro-4-Methylphenyl)pyridin-2-Yl)methanone Length = 286

Iteration: 1
 Score = 86.7 bits (213), Expect = 1e-17,   Method: Compositional matrix adjust.
 Identities = 61/194 (31%), Positives = 97/194 (50%), Gaps = 6/194 (3%)
Query: 43  EDVSGKVVIITGASSGIGEHLAYEYXXXXXXXXXXXXXEKSLEEVADTAREIGSPDVITI 102
           E + GK VI+TGAS GIG  +AY               +++L++V     E+G+     I
Sbjct: 24  EMLQGKKVIVTGASKGIGREMAYHLAKMGAHVVVTARSKETLQKVVSHCLELGAASAHYI 83
Query: 103 RADVSKVDDCRSLVEETMNHFGRLDHLV-NNAGISSVALFEDIVNITDFKQIMNINFWGS 161
              +  +      V +     G LD L+ N+   +S+ LF D  +I   ++ M +NF   
Sbjct: 84  AGTMEDMTFAEQFVAQAGKLMGGLDMLILNHITNTSLNLFHD--DIHHVRKSMEVNFLSY 141
Query: 162 VYTTRFAVPHLRYTKGKIVVLSSAASWLTAPRMSFYNASKAALVLFFETLRVELG---SD 218
           V  T  A+P L+ + G IVV+SS A  +  P ++ Y+ASK AL  FF ++R E      +
Sbjct: 142 VVLTVAALPMLKQSNGSIVVVSSLAGKVAYPMVAAYSASKFALDGFFSSIRKEYSVSRVN 201
Query: 219 VGVTIVTPGFIESE 232
           V +T+   G I++E
Sbjct: 202 VSITLCVLGLIDTE 215

>pdb|2ILT|A Chain A, Human 11-Beta-Hydroxysteroid Dehydrogenase (Hsd1) With Nadp And Adamantane Sulfone Inhibitor Length = 275

Iteration: 1
 Score = 86.7 bits (213), Expect = 1e-17,   Method: Compositional matrix adjust.
 Identities = 64/203 (31%), Positives = 102/203 (50%), Gaps = 7/203 (3%)
Query: 43  EDVSGKVVIITGASSGIGEHLAYEYXXXXXXXXXXXXXEKSLEEVADTAREIGSPDVITI 102
           E + GK VI+TGAS GIG  +AY               +++L++V     E+G+     I
Sbjct: 20  EMLQGKKVIVTGASKGIGREMAYHLAKMGAHVVVTARSKETLQKVVSHCLELGAASAHYI 79
Query: 103 RADVSKVDDCRSLVEETMNHFGRLDHLV-NNAGISSVALFEDIVNITDFKQIMNINFWGS 161
              +  +      V +     G LD L+ N+   +S+ LF D  +I   ++ M +NF   
Sbjct: 80  AGTMEDMTFAEQFVAQAGKLMGGLDMLILNHITNTSLNLFHD--DIHHVRKSMEVNFLSY 137
Query: 162 VYTTRFAVPHLRYTKGKIVVLSSAASWLTAPRMSFYNASKAALVLFFETLRVELG---SD 218
           V  T  A+P L+ + G IVV+SS A  +  P ++ Y+ASK AL  FF ++R E      +
Sbjct: 138 VVLTVAALPMLKQSNGSIVVVSSLAGKVAYPMVAAYSASKFALDGFFSSIRKEYSVSRVN 197
Query: 219 VGVTIVTPGFIESELTQGKFLTG 241
           V +T+   G I++E T  K ++G
Sbjct: 198 VSITLCVLGLIDTE-TAMKAVSG 219

>pdb|4BB5|A Chain A, Free-Wilson And Structural Approaches To Co-Optimising Human And Rodent Isoform Potency For 11b-Hydroxysteroid Dehydrogenase Type 1 11b-Hsd1 Inhibitors Length = 292

Iteration: 1
 Score = 86.7 bits (213), Expect = 1e-17,   Method: Compositional matrix adjust.
 Identities = 61/194 (31%), Positives = 97/194 (50%), Gaps = 6/194 (3%)
Query: 43  EDVSGKVVIITGASSGIGEHLAYEYXXXXXXXXXXXXXEKSLEEVADTAREIGSPDVITI 102
           E + GK VI+TGAS GIG  +AY               +++L++V     E+G+     I
Sbjct: 30  EMLQGKKVIVTGASKGIGREMAYHLAKMGAHVVVTARSKETLQKVVSHCLELGAASAHYI 89
Query: 103 RADVSKVDDCRSLVEETMNHFGRLDHLV-NNAGISSVALFEDIVNITDFKQIMNINFWGS 161
              +  +      V +     G LD L+ N+   +S+ LF D  +I   ++ M +NF   
Sbjct: 90  AGTMEDMTFAEQFVAQAGKLMGGLDMLILNHITNTSLNLFHD--DIHHVRKSMEVNFLSY 147
Query: 162 VYTTRFAVPHLRYTKGKIVVLSSAASWLTAPRMSFYNASKAALVLFFETLRVELG---SD 218
           V  T  A+P L+ + G IVV+SS A  +  P ++ Y+ASK AL  FF ++R E      +
Sbjct: 148 VVLTVAALPMLKQSNGSIVVVSSLAGKVAYPLVAAYSASKFALDGFFSSIRKEYSVSRVN 207
Query: 219 VGVTIVTPGFIESE 232
           V +T+   G I++E
Sbjct: 208 VSITLCVLGLIDTE 221

>pdb|4BB6|A Chain A, Free-Wilson And Structural Approaches To Co-Optimising Human And Rodent Isoform Potency For 11b-Hydroxysteroid Dehydrogenase Type 1 11b-Hsd1 Inhibitors Length = 292

Iteration: 1
 Score = 86.3 bits (212), Expect = 2e-17,   Method: Compositional matrix adjust.
 Identities = 61/194 (31%), Positives = 97/194 (50%), Gaps = 6/194 (3%)
Query: 43  EDVSGKVVIITGASSGIGEHLAYEYXXXXXXXXXXXXXEKSLEEVADTAREIGSPDVITI 102
           E + GK VI+TGAS GIG  +AY               +++L++V     E+G+     I
Sbjct: 30  EMLQGKKVIVTGASKGIGREMAYHLAKMGAHVVVTARSKETLQKVVSHCLELGAASAHYI 89
Query: 103 RADVSKVDDCRSLVEETMNHFGRLDHLV-NNAGISSVALFEDIVNITDFKQIMNINFWGS 161
              +  +      V +     G LD L+ N+   +S+ LF D  +I   ++ M +NF   
Sbjct: 90  AGTMEDMTFAEQFVAQAGKLMGGLDMLILNHITNTSLNLFHD--DIHHVRKSMEVNFLSY 147
Query: 162 VYTTRFAVPHLRYTKGKIVVLSSAASWLTAPRMSFYNASKAALVLFFETLRVELG---SD 218
           V  T  A+P L+ + G IVV+SS A  +  P ++ Y+ASK AL  FF ++R E      +
Sbjct: 148 VVLTVAALPMLKQSNGSIVVVSSLAGKVAYPLVAAYSASKFALDGFFSSIRKEYSVSRVN 207
Query: 219 VGVTIVTPGFIESE 232
           V +T+   G I++E
Sbjct: 208 VSITLCVLGLIDTE 221

>pdb|4HFR|A Chain A, Human 11beta-Hydroxysteroid Dehydrogenase Type 1 In Complex With An Orally Bioavailable Acidic Inhibitor Azd4017. Length = 272

Iteration: 1
 Score = 86.3 bits (212), Expect = 2e-17,   Method: Compositional matrix adjust.
 Identities = 61/194 (31%), Positives = 97/194 (50%), Gaps = 6/194 (3%)
Query: 43  EDVSGKVVIITGASSGIGEHLAYEYXXXXXXXXXXXXXEKSLEEVADTAREIGSPDVITI 102
           E + GK VI+TGAS GIG  +AY               +++L++V     E+G+     I
Sbjct: 10  EMLQGKKVIVTGASKGIGREMAYHLAKMGAHVVVTARSKETLQKVVSHCLELGAASAHYI 69
Query: 103 RADVSKVDDCRSLVEETMNHFGRLDHLV-NNAGISSVALFEDIVNITDFKQIMNINFWGS 161
              +  +      V +     G LD L+ N+   +S+ LF D  +I   ++ M +NF   
Sbjct: 70  AGTMEDMTFAEQFVAQAGKLMGGLDMLILNHITNTSLNLFHD--DIHHVRKSMEVNFLSY 127
Query: 162 VYTTRFAVPHLRYTKGKIVVLSSAASWLTAPRMSFYNASKAALVLFFETLRVELG---SD 218
           V  T  A+P L+ + G IVV+SS A  +  P ++ Y+ASK AL  FF ++R E      +
Sbjct: 128 VVLTVAALPMLKQSNGSIVVVSSLAGKVAYPLVAAYSASKFALDGFFSSIRKEYSVSRVN 187
Query: 219 VGVTIVTPGFIESE 232
           V +T+   G I++E
Sbjct: 188 VSITLCVLGLIDTE 201

>pdb|3RIH|A Chain A, Crystal Structure Of A Putative Short Chain Dehydrogenase Or Reductase From Mycobacterium Abscessus Length = 293

Iteration: 1
 Score = 85.5 bits (210), Expect = 3e-17,   Method: Compositional matrix adjust.
 Identities = 59/193 (30%), Positives = 96/193 (49%), Gaps = 6/193 (3%)
Query: 44  DVSGKVVIITGASSGIGEHLAYEYXXXXXXXXXXXXXEKSLEEVADTAREIGSPDVITIR 103
           D+S + V++TG + GIG  +A  +              + L  V     E+G+ +VI +R
Sbjct: 38  DLSARSVLVTGGTKGIGRGIATVFARAGANVAVAARSPRELSSVTAELGELGAGNVIGVR 97
Query: 104 ADVSKVDDCRSLVEETMNHFGRLDHLVNNAGISSVALFEDIVNITDFKQIMNINFWGSVY 163
            DVS    C       ++ FG LD +  NAGI   A   D +      +++++N  G+VY
Sbjct: 98  LDVSDPGSCADAARTVVDAFGALDVVCANAGIFPEARL-DTMTPEQLSEVLDVNVKGTVY 156
Query: 164 TTRFAVPHLRYT-KGKIVVLSSAASWLTA-PRMSFYNASKAALVLFFETLRVELGSDVGV 221
           T +  +  L  + +G++++ SS    +T  P  S Y ASKAA + F  T  +EL +  GV
Sbjct: 157 TVQACLAPLTASGRGRVILTSSITGPVTGYPGWSHYGASKAAQLGFMRTAAIEL-APRGV 215
Query: 222 TI--VTPGFIESE 232
           T+  + PG I +E
Sbjct: 216 TVNAILPGNILTE 228

>pdb|3LZ6|A Chain A, Guinea Pig 11beta Hydroxysteroid Dehydrogenase With Pf-877423 Length = 263

Iteration: 1
 Score = 84.3 bits (207), Expect = 6e-17,   Method: Compositional matrix adjust.
 Identities = 61/194 (31%), Positives = 95/194 (48%), Gaps = 6/194 (3%)
Query: 43  EDVSGKVVIITGASSGIGEHLAYEYXXXXXXXXXXXXXEKSLEEVADTAREIGSPDVITI 102
           E + GK VI+TGAS GIG  +AY               +++L++V     E+G+     I
Sbjct: 5   EMLQGKKVIVTGASKGIGREIAYHLAKMGAHVVVTARSKEALQKVVARCLELGAASAHYI 64
Query: 103 RADVSKVDDCRSLVEETMNHFGRLDHLV-NNAGISSVALFEDIVNITDFKQIMNINFWGS 161
              +  +      V E  N  G LD L+ N+   + +  F     I + ++ M +NF   
Sbjct: 65  AGSMEDMTFAEEFVAEAGNLMGGLDMLILNHVLYNRLTFFHG--EIDNVRKSMEVNFHSF 122
Query: 162 VYTTRFAVPHLRYTKGKIVVLSSAASWLTAPRMSFYNASKAALVLFFETLRVEL---GSD 218
           V  +  A+P L  ++G I V+SS A  +T P ++ Y+ASK AL  FF TLR E      +
Sbjct: 123 VVLSVAAMPMLMQSQGSIAVVSSVAGKITYPLIAPYSASKFALDGFFSTLRSEFLVNKVN 182
Query: 219 VGVTIVTPGFIESE 232
           V +T+   G I++E
Sbjct: 183 VSITLCILGLIDTE 196

>pdb|1XSE|A Chain A, Crystal Structure Of Guinea Pig 11beta-Hydroxysteroid Dehydrogenase Type 1 Length = 295

Iteration: 1
 Score = 84.3 bits (207), Expect = 6e-17,   Method: Compositional matrix adjust.
 Identities = 61/194 (31%), Positives = 95/194 (48%), Gaps = 6/194 (3%)
Query: 43  EDVSGKVVIITGASSGIGEHLAYEYXXXXXXXXXXXXXEKSLEEVADTAREIGSPDVITI 102
           E + GK VI+TGAS GIG  +AY               +++L++V     E+G+     I
Sbjct: 28  EMLQGKKVIVTGASKGIGREIAYHLAKMGAHVVVTARSKEALQKVVARCLELGAASAHYI 87
Query: 103 RADVSKVDDCRSLVEETMNHFGRLDHLV-NNAGISSVALFEDIVNITDFKQIMNINFWGS 161
              +  +      V E  N  G LD L+ N+   + +  F     I + ++ M +NF   
Sbjct: 88  AGSMEDMTFAEEFVAEAGNLMGGLDMLILNHVLYNRLTFFHG--EIDNVRKSMEVNFHSF 145
Query: 162 VYTTRFAVPHLRYTKGKIVVLSSAASWLTAPRMSFYNASKAALVLFFETLRVEL---GSD 218
           V  +  A+P L  ++G I V+SS A  +T P ++ Y+ASK AL  FF TLR E      +
Sbjct: 146 VVLSVAAMPMLMQSQGSIAVVSSVAGKITYPLIAPYSASKFALDGFFSTLRSEFLVNKVN 205
Query: 219 VGVTIVTPGFIESE 232
           V +T+   G I++E
Sbjct: 206 VSITLCILGLIDTE 219

>pdb|3G49|A Chain A, N-(Pyridin-2-Yl) Arylsulfonamide Inhibitors Of 11b-Hydroxysteroid Dehydrogenase Type 1: Discovery Of Pf-915275 Length = 277

Iteration: 1
 Score = 84.3 bits (207), Expect = 6e-17,   Method: Compositional matrix adjust.
 Identities = 61/194 (31%), Positives = 95/194 (48%), Gaps = 6/194 (3%)
Query: 43  EDVSGKVVIITGASSGIGEHLAYEYXXXXXXXXXXXXXEKSLEEVADTAREIGSPDVITI 102
           E + GK VI+TGAS GIG  +AY               +++L++V     E+G+     I
Sbjct: 7   EMLQGKKVIVTGASKGIGREIAYHLAKMGAHVVVTARSKEALQKVVARCLELGAASAHYI 66
Query: 103 RADVSKVDDCRSLVEETMNHFGRLDHLV-NNAGISSVALFEDIVNITDFKQIMNINFWGS 161
              +  +      V E  N  G LD L+ N+   + +  F     I + ++ M +NF   
Sbjct: 67  AGSMEDMTFAEEFVAEAGNLMGGLDMLILNHVLYNRLTFFHG--EIDNVRKSMEVNFHSF 124
Query: 162 VYTTRFAVPHLRYTKGKIVVLSSAASWLTAPRMSFYNASKAALVLFFETLRVEL---GSD 218
           V  +  A+P L  ++G I V+SS A  +T P ++ Y+ASK AL  FF TLR E      +
Sbjct: 125 VVLSVAAMPMLMQSQGSIAVVSSVAGKITYPLIAPYSASKFALDGFFSTLRSEFLVNKVN 184
Query: 219 VGVTIVTPGFIESE 232
           V +T+   G I++E
Sbjct: 185 VSITLCILGLIDTE 198

>pdb|3DWF|A Chain A, Crystal Structure Of The Guinea Pig 11beta-Hydroxysteroid Dehydrogenase Type 1 Mutant F278e Length = 276

Iteration: 1
 Score = 84.0 bits (206), Expect = 7e-17,   Method: Compositional matrix adjust.
 Identities = 61/194 (31%), Positives = 95/194 (48%), Gaps = 6/194 (3%)
Query: 43  EDVSGKVVIITGASSGIGEHLAYEYXXXXXXXXXXXXXEKSLEEVADTAREIGSPDVITI 102
           E + GK VI+TGAS GIG  +AY               +++L++V     E+G+     I
Sbjct: 7   EMLQGKKVIVTGASKGIGREIAYHLAKMGAHVVVTARSKEALQKVVARCLELGAASAHYI 66
Query: 103 RADVSKVDDCRSLVEETMNHFGRLDHLV-NNAGISSVALFEDIVNITDFKQIMNINFWGS 161
              +  +      V E  N  G LD L+ N+   + +  F     I + ++ M +NF   
Sbjct: 67  AGSMEDMTFAEEFVAEAGNLMGGLDMLILNHVLYNRLTFFHG--EIDNVRKSMEVNFHSF 124
Query: 162 VYTTRFAVPHLRYTKGKIVVLSSAASWLTAPRMSFYNASKAALVLFFETLRVEL---GSD 218
           V  +  A+P L  ++G I V+SS A  +T P ++ Y+ASK AL  FF TLR E      +
Sbjct: 125 VVLSVAAMPMLMQSQGSIAVVSSVAGKITYPLIAPYSASKFALDGFFSTLRSEFLVNKVN 184
Query: 219 VGVTIVTPGFIESE 232
           V +T+   G I++E
Sbjct: 185 VSITLCILGLIDTE 198

>pdb|1G6K|A Chain A, Crystal Structure Of Glucose Dehydrogenase Mutant E96a Complexed With Nad+ Length = 261

Iteration: 1
 Score = 83.2 bits (204), Expect = 1e-16,   Method: Compositional matrix adjust.
 Identities = 54/200 (27%), Positives = 104/200 (52%), Gaps = 6/200 (3%)
Query: 43  EDVSGKVVIITGASSGIGEHLAYEYXXXXXXXXXX-XXXEKSLEEVADTAREIGSPDVIT 101
           +D+ GKVV+ITG+S+G+G+ +A  +              E     V +  +++G  + I 
Sbjct: 3   KDLEGKVVVITGSSTGLGKSMAIRFATEKAKVVVNYRSKEDEANSVLEEIKKVGG-EAIA 61
Query: 102 IRADVSKVDDCRSLVEETMNHFGRLDHLVNNAGISSVALFEDIVNITDFKQIMNINFWGS 161
           ++ DV+   D  +LV+  +  FG+LD ++NNAG+++     ++ +++D+ ++++ N  G+
Sbjct: 62  VKGDVTVESDVINLVQSAIKEFGKLDVMINNAGLANPVSSHEM-SLSDWNKVIDTNLTGA 120
Query: 162 VYTTRFAVPHL--RYTKGKIVVLSSAASWLTAPRMSFYNASKAALVLFFETLRVELGSD- 218
              +R A+ +      KG ++ +SS    +  P    Y ASK  + L  ETL +E     
Sbjct: 121 FLGSREAIKYFVENDIKGTVINMSSVHEKIPWPLFVHYAASKGGMKLMTETLALEYAPKG 180
Query: 219 VGVTIVTPGFIESELTQGKF 238
           + V  + PG I + +   KF
Sbjct: 181 IRVNNIGPGAINTPINAEKF 200

>pdb|1GCO|A Chain A, Crystal Structure Of Glucose Dehydrogenase Complexed With Nad+ Length = 261

Iteration: 1
 Score = 82.4 bits (202), Expect = 2e-16,   Method: Compositional matrix adjust.
 Identities = 54/200 (27%), Positives = 103/200 (51%), Gaps = 6/200 (3%)
Query: 43  EDVSGKVVIITGASSGIGEHLAYEYXXXXXXXXXX-XXXEKSLEEVADTAREIGSPDVIT 101
           +D+ GKVV+ITG+S+G+G+ +A  +              E     V +  +++G  + I 
Sbjct: 3   KDLEGKVVVITGSSTGLGKSMAIRFATEKAKVVVNYRSKEDEANSVLEEIKKVGG-EAIA 61
Query: 102 IRADVSKVDDCRSLVEETMNHFGRLDHLVNNAGISSVALFEDIVNITDFKQIMNINFWGS 161
           ++ DV+   D  +LV+  +  FG+LD ++NNAG+ +     ++ +++D+ ++++ N  G+
Sbjct: 62  VKGDVTVESDVINLVQSAIKEFGKLDVMINNAGLENPVSSHEM-SLSDWNKVIDTNLTGA 120
Query: 162 VYTTRFAVPHL--RYTKGKIVVLSSAASWLTAPRMSFYNASKAALVLFFETLRVELGSD- 218
              +R A+ +      KG ++ +SS    +  P    Y ASK  + L  ETL +E     
Sbjct: 121 FLGSREAIKYFVENDIKGTVINMSSVHEKIPWPLFVHYAASKGGMKLMTETLALEYAPKG 180
Query: 219 VGVTIVTPGFIESELTQGKF 238
           + V  + PG I + +   KF
Sbjct: 181 IRVNNIGPGAINTPINAEKF 200

>pdb|1GEE|A Chain A, Crystal Structure Of Glucose Dehydrogenase Mutant Q252l Complexed With Nad+ Length = 261

Iteration: 1
 Score = 82.4 bits (202), Expect = 2e-16,   Method: Compositional matrix adjust.
 Identities = 54/200 (27%), Positives = 103/200 (51%), Gaps = 6/200 (3%)
Query: 43  EDVSGKVVIITGASSGIGEHLAYEYXXXXXXXXXX-XXXEKSLEEVADTAREIGSPDVIT 101
           +D+ GKVV+ITG+S+G+G+ +A  +              E     V +  +++G  + I 
Sbjct: 3   KDLEGKVVVITGSSTGLGKSMAIRFATEKAKVVVNYRSKEDEANSVLEEIKKVGG-EAIA 61
Query: 102 IRADVSKVDDCRSLVEETMNHFGRLDHLVNNAGISSVALFEDIVNITDFKQIMNINFWGS 161
           ++ DV+   D  +LV+  +  FG+LD ++NNAG+ +     ++ +++D+ ++++ N  G+
Sbjct: 62  VKGDVTVESDVINLVQSAIKEFGKLDVMINNAGLENPVSSHEM-SLSDWNKVIDTNLTGA 120
Query: 162 VYTTRFAVPHL--RYTKGKIVVLSSAASWLTAPRMSFYNASKAALVLFFETLRVELGSD- 218
              +R A+ +      KG ++ +SS    +  P    Y ASK  + L  ETL +E     
Sbjct: 121 FLGSREAIKYFVENDIKGTVINMSSVHEKIPWPLFVHYAASKGGMKLMTETLALEYAPKG 180
Query: 219 VGVTIVTPGFIESELTQGKF 238
           + V  + PG I + +   KF
Sbjct: 181 IRVNNIGPGAINTPINAEKF 200

>pdb|3ENN|A Chain A, 2.1a Crystal Structure Of GlucoseRIBITOL DEHYDROGENASE FROM BRUCELLA Melitensis (P43212) Length = 249

Iteration: 1
 Score = 82.4 bits (202), Expect = 2e-16,   Method: Compositional matrix adjust.
 Identities = 60/197 (30%), Positives = 101/197 (51%), Gaps = 8/197 (4%)
Query: 44  DVSGKVVIITGASSGIGEHLAYEYXXXXXXXXXXXXXEKSLEEVADTAREIGSPDVITIR 103
           D++G+  ++TGA+ G+GE +A                E+ L+E+A    E+G   +    
Sbjct: 7   DLTGRKALVTGATGGLGEAIARALHAQGAIVGLHGTREEKLKELA---AELGE-RIFVFP 62
Query: 104 ADVSKVDDCRSLVEETMNHFGRLDHLVNNAGISSVALFEDIVNITDFKQIMNINFWGSVY 163
           A++S  +  ++L ++     G +D LVNNAGI+   LF  + +  D+  ++ +N      
Sbjct: 63  ANLSDREAVKALGQKAEEEMGGVDILVNNAGITRDGLFVRMSD-EDWDAVLTVNLTSVFN 121
Query: 164 TTR-FAVPHLRYTKGKIVVLSSAASWLTAPRMSFYNASKAALVLFFETLRVELGS-DVGV 221
            TR    P +R   G+I+ ++S       P  + Y ASKA L+ F ++L  E+ S +V V
Sbjct: 122 LTRELTHPMMRRRNGRIINITSIVGVTGNPGQANYCASKAGLIGFSKSLAQEIASRNVTV 181
Query: 222 TIVTPGFIESELTQGKF 238
             + PGFIES +T GK 
Sbjct: 182 NCIAPGFIESAMT-GKL 197

>pdb|3EMK|A Chain A, 2.5a Crystal Structure Of GlucoseRIBITOL DEHYDROGENASE From Brucella Melitensis Length = 246

Iteration: 1
 Score = 82.4 bits (202), Expect = 2e-16,   Method: Compositional matrix adjust.
 Identities = 60/197 (30%), Positives = 101/197 (51%), Gaps = 8/197 (4%)
Query: 44  DVSGKVVIITGASSGIGEHLAYEYXXXXXXXXXXXXXEKSLEEVADTAREIGSPDVITIR 103
           D++G+  ++TGA+ G+GE +A                E+ L+E+A    E+G   +    
Sbjct: 4   DLTGRKALVTGATGGLGEAIARALHAQGAIVGLHGTREEKLKELA---AELGE-RIFVFP 59
Query: 104 ADVSKVDDCRSLVEETMNHFGRLDHLVNNAGISSVALFEDIVNITDFKQIMNINFWGSVY 163
           A++S  +  ++L ++     G +D LVNNAGI+   LF  + +  D+  ++ +N      
Sbjct: 60  ANLSDREAVKALGQKAEEEMGGVDILVNNAGITRDGLFVRMSD-EDWDAVLTVNLTSVFN 118
Query: 164 TTR-FAVPHLRYTKGKIVVLSSAASWLTAPRMSFYNASKAALVLFFETLRVELGS-DVGV 221
            TR    P +R   G+I+ ++S       P  + Y ASKA L+ F ++L  E+ S +V V
Sbjct: 119 LTRELTHPMMRRRNGRIINITSIVGVTGNPGQANYCASKAGLIGFSKSLAQEIASRNVTV 178
Query: 222 TIVTPGFIESELTQGKF 238
             + PGFIES +T GK 
Sbjct: 179 NCIAPGFIESAMT-GKL 194

>pdb|1VL8|A Chain A, Crystal Structure Of Gluconate 5-dehydrogenase (tm0441) From Thermotoga Maritima At 2.07 A Resolution Length = 267

Iteration: 1
 Score = 81.6 bits (200), Expect = 3e-16,   Method: Compositional matrix adjust.
 Identities = 55/201 (27%), Positives = 100/201 (49%), Gaps = 10/201 (4%)
Query: 44  DVSGKVVIITGASSGIGEHLAYEYXXXXXXXXXXXXXEKSLEEVADTAREIGSP---DVI 100
           D+ G+V ++TG S G+G  +A                 ++LEE ++ A+++      + +
Sbjct: 18  DLRGRVALVTGGSRGLGFGIA---QGLAEAGCSVVVASRNLEEASEAAQKLTEKYGVETM 74
Query: 101 TIRADVSKVDDCRSLVEETMNHFGRLDHLVNNAGISSVALFEDIVNITDFKQIMNINFWG 160
             R DVS  ++ + L+E     FG+LD +VN AGI+     E+   + +F+Q++ +N +G
Sbjct: 75  AFRCDVSNYEEVKKLLEAVKEKFGKLDTVVNAAGINRRHPAEEF-PLDEFRQVIEVNLFG 133
Query: 161 SVYTTRFAVPHLRYTKGK--IVVLSSAASWLTAPRMSFYNASKAALVLFFETLRVELGS- 217
           + Y  R A   LR +     I + S     +T P +S Y ASK  +    + L  E G  
Sbjct: 134 TYYVCREAFSLLRESDNPSIINIGSLTVEEVTMPNISAYAASKGGVASLTKALAKEWGRY 193
Query: 218 DVGVTIVTPGFIESELTQGKF 238
            + V ++ PG+  +++T+  F
Sbjct: 194 GIRVNVIAPGWYRTKMTEAVF 214

>pdb|1YBV|A Chain A, Structure Of Trihydroxynaphthalene Reductase In Complex With Nadph And An Active Site Inhibitor Length = 283

Iteration: 1
 Score = 81.6 bits (200), Expect = 4e-16,   Method: Compositional matrix adjust.
 Identities = 56/195 (28%), Positives = 98/195 (50%), Gaps = 6/195 (3%)
Query: 42  SEDVSGKVVIITGASSGIGEHLAYEYXXXXXXXXXXXXXE-KSLEEVADTAREIGSPDVI 100
           S  + GKV ++TGA  GIG  +A E                +S EEV    ++ GS D  
Sbjct: 24  SASLEGKVALVTGAGRGIGREMAMELGRRGCKVIVNYANSTESAEEVVAAIKKNGS-DAA 82
Query: 101 TIRADVSKVDDCRSLVEETMNHFGRLDHLVNNAGISSVALFEDIVNITDFKQIMNINFWG 160
            ++A+V  V+D   + EE +  FG+LD + +N+G+ S    +D V   +F ++  IN  G
Sbjct: 83  CVKANVGVVEDIVRMFEEAVKIFGKLDIVCSNSGVVSFGHVKD-VTPEEFDRVFTINTRG 141
Query: 161 SVYTTRFAVPHLRYTKGKIVVLSSAASWLTA-PRMSFYNASKAALVLFFETLRVELG-SD 218
             +  R A  HL    G+++++ S      A P+ + Y+ SK A+  F   + +++    
Sbjct: 142 QFFVAREAYKHLE-IGGRLILMGSITGQAKAVPKHAVYSGSKGAIETFARCMAIDMADKK 200
Query: 219 VGVTIVTPGFIESEL 233
           + V +V PG I++++
Sbjct: 201 ITVNVVAPGGIKTDM 215

>pdb|1DOH|A Chain A, Structure Of Trihydroxynaphthalene Reductase In Complex With Nadph And 4-nitro-inden-1-one Length = 283

Iteration: 1
 Score = 81.6 bits (200), Expect = 4e-16,   Method: Compositional matrix adjust.
 Identities = 56/195 (28%), Positives = 98/195 (50%), Gaps = 6/195 (3%)
Query: 42  SEDVSGKVVIITGASSGIGEHLAYEYXXXXXXXXXXXXXE-KSLEEVADTAREIGSPDVI 100
           S  + GKV ++TGA  GIG  +A E                +S EEV    ++ GS D  
Sbjct: 24  SASLEGKVALVTGAGRGIGREMAMELGRRGCKVIVNYANSTESAEEVVAAIKKNGS-DAA 82
Query: 101 TIRADVSKVDDCRSLVEETMNHFGRLDHLVNNAGISSVALFEDIVNITDFKQIMNINFWG 160
            ++A+V  V+D   + EE +  FG+LD + +N+G+ S    +D V   +F ++  IN  G
Sbjct: 83  CVKANVGVVEDIVRMFEEAVKIFGKLDIVCSNSGVVSFGHVKD-VTPEEFDRVFTINTRG 141
Query: 161 SVYTTRFAVPHLRYTKGKIVVLSSAASWLTA-PRMSFYNASKAALVLFFETLRVELG-SD 218
             +  R A  HL    G+++++ S      A P+ + Y+ SK A+  F   + +++    
Sbjct: 142 QFFVAREAYKHLE-IGGRLILMGSITGQAKAVPKHAVYSGSKGAIETFARCMAIDMADKK 200
Query: 219 VGVTIVTPGFIESEL 233
           + V +V PG I++++
Sbjct: 201 ITVNVVAPGGIKTDM 215

>pdb|1RWB|A Chain A, Cooperative Effect Of Two Surface Amino Acid Mutations (Q252l And E170k) Of Glucose Dehydrogenase From Bacillus Megaterium Iwg3 For The Stabilization Of Oligomeric State Length = 261

Iteration: 1
 Score = 80.9 bits (198), Expect = 7e-16,   Method: Compositional matrix adjust.
 Identities = 53/200 (26%), Positives = 103/200 (51%), Gaps = 6/200 (3%)
Query: 43  EDVSGKVVIITGASSGIGEHLAYEYXXXXXXXXXX-XXXEKSLEEVADTAREIGSPDVIT 101
           +D+ GKVV+ITG+S+G+G+ +A  +              E     V +  +++G  + I 
Sbjct: 3   KDLEGKVVVITGSSTGLGKSMAIRFATEKAKVVVNYRSKEDEANSVLEEIKKVGG-EAIA 61
Query: 102 IRADVSKVDDCRSLVEETMNHFGRLDHLVNNAGISSVALFEDIVNITDFKQIMNINFWGS 161
           ++ DV+   D  +LV+  +  FG+LD ++NNAG+ +     ++ +++D+ ++++ N  G+
Sbjct: 62  VKGDVTVESDVINLVQSAIKEFGKLDVMINNAGLENPVSSHEM-SLSDWNKVIDTNLTGA 120
Query: 162 VYTTRFAVPHL--RYTKGKIVVLSSAASWLTAPRMSFYNASKAALVLFFETLRVELGSD- 218
              +R A+ +      KG ++ +SS    +  P    Y ASK  + L  +TL +E     
Sbjct: 121 FLGSREAIKYFVENDIKGTVINMSSVHEKIPWPLFVHYAASKGGMKLMTKTLALEYAPKG 180
Query: 219 VGVTIVTPGFIESELTQGKF 238
           + V  + PG I + +   KF
Sbjct: 181 IRVNNIGPGAINTPINAEKF 200

>pdb|3SJ7|A Chain A, Structure Of Beta-Ketoacetyl-Coa Reductase (Fabg) From Staphylococcus Aureus Complex With Nadph Length = 252

Iteration: 1
 Score = 79.7 bits (195), Expect = 1e-15,   Method: Compositional matrix adjust.
 Identities = 60/195 (30%), Positives = 99/195 (50%), Gaps = 15/195 (7%)
Query: 48  KVVIITGASSGIGEHLAYE-----YXXXXXXXXXXXXXEKSLEEVADTAREIGSPDVITI 102
           K  ++TGAS GIG  +A +     Y             E  +EE+   A+ +   D   I
Sbjct: 11  KSALVTGASRGIGRSIALQLAEEGYNVAVNYAGSKEKAEAVVEEI--KAKGV---DSFAI 65
Query: 103 RADVSKVDDCRSLVEETMNHFGRLDHLVNNAGISSVALFEDIVNITDFKQIMNINFWGSV 162
           +A+V+  D+ +++++E ++ FG LD LVNNAGI+   L   +    ++  +++ N  G  
Sbjct: 66  QANVADADEVKAMIKEVVSQFGSLDVLVNNAGITRDNLLMRMKE-QEWDDVIDTNLKGVF 124
Query: 163 YTTRFAVPH-LRYTKGKIVVLSSAASWLTAPRMSFYNASKAALVLFFETLRVELGSDVGV 221
              + A P  LR   G I+ LSS    +  P  + Y A+KA ++   ++   EL S  G+
Sbjct: 125 NCIQKATPQMLRQRSGAIINLSSVVGAVGNPGQANYVATKAGVIGLTKSAARELASR-GI 183
Query: 222 TI--VTPGFIESELT 234
           T+  V PGFI S++T
Sbjct: 184 TVNAVAPGFIVSDMT 198

>pdb|1YDE|A Chain A, Crystal Structure Of Human Retinal Short-Chain DehydrogenaseREDUCTASE 3 Length = 270

Iteration: 1
 Score = 79.3 bits (194), Expect = 2e-15,   Method: Compositional matrix adjust.
 Identities = 47/150 (31%), Positives = 79/150 (52%), Gaps = 1/150 (0%)
Query: 85  EEVADTAREIGSPDVITIRADVSKVDDCRSLVEETMNHFGRLDHLVNNAGISSVALFEDI 144
           +E    A E   P  + I  DV++ DD ++LV ET+  FGRLD +VNNAG        + 
Sbjct: 42  DESGGRALEQELPGAVFILCDVTQEDDVKTLVSETIRRFGRLDCVVNNAGHHPPPQRPEE 101
Query: 145 VNITDFKQIMNINFWGSVYTTRFAVPHLRYTKGKIVVLSSAASWLTAPRMSFYNASKAAL 204
            +   F+Q++ +N  G+   T+ A+P+LR ++G ++ +SS    +   +   Y A+K A+
Sbjct: 102 TSAQGFRQLLELNLLGTYTLTKLALPYLRKSQGNVINISSLVGAIGQAQAVPYVATKGAV 161
Query: 205 VLFFETLRV-ELGSDVGVTIVTPGFIESEL 233
               + L + E    V V  ++PG I + L
Sbjct: 162 TAMTKALALDESPYGVRVNCISPGNIWTPL 191

>pdb|1SPX|A Chain A, Crystal Structure Of Glucose Dehydrogenase Of Caenorhabditis Elegans In The Apo-Form Length = 278

Iteration: 1
 Score = 79.0 bits (193), Expect = 2e-15,   Method: Compositional matrix adjust.
 Identities = 60/191 (31%), Positives = 95/191 (49%), Gaps = 7/191 (3%)
Query: 48  KVVIITGASSGIGEHLAYEYXXXXXXXXXXXXXEKSLEEVADT--AREIGSPDVITIRAD 105
           KV IITG+S+GIG   A  +              + LEE      A  +   +V ++ AD
Sbjct: 7   KVAIITGSSNGIGRATAVLFAREGAKVTITGRHAERLEETRQQILAAGVSEQNVNSVVAD 66
Query: 106 VSKVDDCRSLVEETMNHFGRLDHLVNNAGIS---SVALFEDIVNITDFKQIMNINFWGSV 162
           V+       ++  T+  FG+LD LVNNAG +   S +      +I  +   +N+N    +
Sbjct: 67  VTTDAGQDEILSTTLGKFGKLDILVNNAGAAIPDSQSKTGTAQSIESYDATLNLNLRSVI 126
Query: 163 YTTRFAVPHLRYTKGKIVVLSSAASWLTA-PRMSFYNASKAALVLFFETLRVEL-GSDVG 220
             T+ AVPHL  TKG+IV +SS AS L A P   +Y+ +KAA+  +     ++L    + 
Sbjct: 127 ALTKKAVPHLSSTKGEIVNISSIASGLHATPDFPYYSIAKAAIDQYTRNTAIDLIQHGIR 186
Query: 221 VTIVTPGFIES 231
           V  ++PG + +
Sbjct: 187 VNSISPGLVAT 197

>pdb|3N74|A Chain A, Crystal Structure Of 3-Ketoacyl-(Acyl-Carrier-Protein) Reduc Brucella Melitensis Length = 261

Iteration: 1
 Score = 78.6 bits (192), Expect = 3e-15,   Method: Compositional matrix adjust.
 Identities = 58/179 (32%), Positives = 90/179 (50%), Gaps = 9/179 (5%)
Query: 42  SEDVSGKVVIITGASSGIGEHLAYEYXXXXXXXXXXXXXEKSLEEVADTAREIGSPDVIT 101
           S  + GKV +ITGA SG GE +A  +             +   E VA    EIG    + 
Sbjct: 4   SMSLEGKVALITGAGSGFGEGMAKRFAKGGAKVVIVDRDKAGAERVAG---EIGD-AALA 59
Query: 102 IRADVSKVDDCRSLVEETMNHFGRLDHLVNNAGISSVALFEDIVNITDFKQIMNINFWGS 161
           + AD+SK  D  + VE  ++ FG++D LVNNAGI       ++V   +F +I+ +N  G 
Sbjct: 60  VAADISKEADVDAAVEAALSKFGKVDILVNNAGIGHKPQNAELVEPEEFDRIVGVNVRGV 119
Query: 162 VYTTRFAVPHLRYTKGK---IVVLSSAASWLTAPR--MSFYNASKAALVLFFETLRVEL 215
              T   +PH +    K    V+L+ A++    PR  +++YNA+K  +V   + L +EL
Sbjct: 120 YLMTSKLIPHFKENGAKGQECVILNVASTGAGRPRPNLAWYNATKGWVVSVTKALAIEL 178

>pdb|3TFO|A Chain A, Crystal Structure Of A Putative 3-Oxoacyl-(Acyl-Carrier-Protein) Reductase From Sinorhizobium Meliloti Length = 264

Iteration: 1
 Score = 78.6 bits (192), Expect = 3e-15,   Method: Compositional matrix adjust.
 Identities = 52/187 (27%), Positives = 97/187 (51%), Gaps = 4/187 (2%)
Query: 48  KVVIITGASSGIGEHLAYEYXXXXXXXXXXXXXEKSLEEVADTAREIGSPDVITIRADVS 107
           KV++ITGAS GIGE +A E              +  +E +A   R+ G   +  +  DV+
Sbjct: 5   KVILITGASGGIGEGIARELGVAGAKILLGARRQARIEAIATEIRDAGGTALAQV-LDVT 63
Query: 108 KVDDCRSLVEETMNHFGRLDHLVNNAGISSVALFEDIVNITDFKQIMNINFWGSVYTTRF 167
                 +  +  ++ +GR+D LVNNAG+  ++     V + ++++++++N  G ++    
Sbjct: 64  DRHSVAAFAQAAVDTWGRIDVLVNNAGVMPLSPLA-AVKVDEWERMIDVNIKGVLWGIGA 122
Query: 168 AVPHLRYTK-GKIVVLSSAASWLTAPRMSFYNASKAALVLFFETLRVELGSDVGVTIVTP 226
            +P +   + G+I+ + S  +    P  + Y A+K A+    + LR E  +++ VT V P
Sbjct: 123 VLPIMEAQRSGQIINIGSIGALSVVPTAAVYCATKFAVRAISDGLRQE-STNIRVTCVNP 181
Query: 227 GFIESEL 233
           G +ESEL
Sbjct: 182 GVVESEL 188

>pdb|3AY6|A Chain A, Crystal Structure Of Bacillus Megaterium Glucose Dehydrogenase 4 A258f Mutant In Complex With Nadh And D-Glucose Length = 269

Iteration: 1
 Score = 78.2 bits (191), Expect = 4e-15,   Method: Compositional matrix adjust.
 Identities = 53/200 (26%), Positives = 98/200 (49%), Gaps = 8/200 (4%)
Query: 44  DVSGKVVIITGASSGIGEHLAYEYXXXXXXXXXXXXXEKSLEEVADTAREI--GSPDVIT 101
           D+  KVV+ITG S+G+G  +A  +              +  EE  D  +E+       I 
Sbjct: 12  DLKDKVVVITGGSTGLGRAMAVRFGQEEAKVVINYYNNE--EEALDAKKEVEEAGGQAII 69
Query: 102 IRADVSKVDDCRSLVEETMNHFGRLDHLVNNAGISSVALFEDIVNITDFKQIMNINFWGS 161
           ++ DV+K +D  +LV+  +  FG LD ++NNAG+ +     ++ ++ ++ ++++ N  G+
Sbjct: 70  VQGDVTKEEDVVNLVQTAIKEFGTLDVMINNAGVENPVPSHEL-SLDNWNKVIDTNLTGA 128
Query: 162 VYTTRFAVPHL--RYTKGKIVVLSSAASWLTAPRMSFYNASKAALVLFFETLRVELGSD- 218
              +R A+ +      KG ++ +SS    +  P    Y ASK  + L  ETL +E     
Sbjct: 129 FLGSREAIKYFVENDIKGNVINMSSVHEMIPWPLFVHYAASKGGMKLMTETLALEYAPKG 188
Query: 219 VGVTIVTPGFIESELTQGKF 238
           + V  + PG + + +   KF
Sbjct: 189 IRVNNIGPGAMNTPINAEKF 208

>pdb|3AUS|A Chain A, Crystal Structure Of Bacillus Megaterium Glucose Dehydrogenase 4 In Ligand-Free Form Length = 269

Iteration: 1
 Score = 78.2 bits (191), Expect = 4e-15,   Method: Compositional matrix adjust.
 Identities = 53/200 (26%), Positives = 98/200 (49%), Gaps = 8/200 (4%)
Query: 44  DVSGKVVIITGASSGIGEHLAYEYXXXXXXXXXXXXXEKSLEEVADTAREI--GSPDVIT 101
           D+  KVV+ITG S+G+G  +A  +              +  EE  D  +E+       I 
Sbjct: 12  DLKDKVVVITGGSTGLGRAMAVRFGQEEAKVVINYYNNE--EEALDAKKEVEEAGGQAII 69
Query: 102 IRADVSKVDDCRSLVEETMNHFGRLDHLVNNAGISSVALFEDIVNITDFKQIMNINFWGS 161
           ++ DV+K +D  +LV+  +  FG LD ++NNAG+ +     ++ ++ ++ ++++ N  G+
Sbjct: 70  VQGDVTKEEDVVNLVQTAIKEFGTLDVMINNAGVENPVPSHEL-SLDNWNKVIDTNLTGA 128
Query: 162 VYTTRFAVPHL--RYTKGKIVVLSSAASWLTAPRMSFYNASKAALVLFFETLRVELGSD- 218
              +R A+ +      KG ++ +SS    +  P    Y ASK  + L  ETL +E     
Sbjct: 129 FLGSREAIKYFVENDIKGNVINMSSVHEMIPWPLFVHYAASKGGMKLMTETLALEYAPKG 188
Query: 219 VGVTIVTPGFIESELTQGKF 238
           + V  + PG + + +   KF
Sbjct: 189 IRVNNIGPGAMNTPINAEKF 208

>pdb|2HQ1|A Chain A, Crystal Structure Of Orf 1438 A Putative GlucoseRIBITOL Dehydrogenase From Clostridium Thermocellum Length = 247

Iteration: 1
 Score = 78.2 bits (191), Expect = 4e-15,   Method: Compositional matrix adjust.
 Identities = 57/194 (29%), Positives = 98/194 (50%), Gaps = 7/194 (3%)
Query: 45  VSGKVVIITGASSGIGEHLAYEYXXXXXX-XXXXXXXEKSLEEVADTAREIGSPDVITIR 103
           + GK  I+TG+S G+G+ +A++                 SL+  A+  +  G  +V+  +
Sbjct: 3   LKGKTAIVTGSSRGLGKAIAWKLGNMGANIVLNGSPASTSLDATAEEFKAAGI-NVVVAK 61
Query: 104 ADVSKVDDCRSLVEETMNHFGRLDHLVNNAGISSVALFEDIVNITDFKQIMNINFWGSVY 163
            DV   +D  ++V+  M+ FGR+D LVNNAGI+   L   +    D+  ++N N   S Y
Sbjct: 62  GDVKNPEDVENMVKTAMDAFGRIDILVNNAGITRDTLMLKMSE-KDWDDVLNTNLK-SAY 119
Query: 164 TTRFAVPH--LRYTKGKIVVLSSAASWLTAPRMSFYNASKAALVLFFETLRVELGSD-VG 220
               AV    L+   GKI+ ++S A  +     + Y ASKA L+ F +++  E  +  + 
Sbjct: 120 LCTKAVSKIMLKQKSGKIINITSIAGIIGNAGQANYAASKAGLIGFTKSIAKEFAAKGIY 179
Query: 221 VTIVTPGFIESELT 234
              V PG I++++T
Sbjct: 180 CNAVAPGIIKTDMT 193

>pdb|3AY7|A Chain A, Crystal Structure Of Bacillus Megaterium Glucose Dehydrogenase 4 G259a Mutant Length = 269

Iteration: 1
 Score = 78.2 bits (191), Expect = 4e-15,   Method: Compositional matrix adjust.
 Identities = 53/200 (26%), Positives = 98/200 (49%), Gaps = 8/200 (4%)
Query: 44  DVSGKVVIITGASSGIGEHLAYEYXXXXXXXXXXXXXEKSLEEVADTAREI--GSPDVIT 101
           D+  KVV+ITG S+G+G  +A  +              +  EE  D  +E+       I 
Sbjct: 12  DLKDKVVVITGGSTGLGRAMAVRFGQEEAKVVINYYNNE--EEALDAKKEVEEAGGQAII 69
Query: 102 IRADVSKVDDCRSLVEETMNHFGRLDHLVNNAGISSVALFEDIVNITDFKQIMNINFWGS 161
           ++ DV+K +D  +LV+  +  FG LD ++NNAG+ +     ++ ++ ++ ++++ N  G+
Sbjct: 70  VQGDVTKEEDVVNLVQTAIKEFGTLDVMINNAGVENPVPSHEL-SLDNWNKVIDTNLTGA 128
Query: 162 VYTTRFAVPHL--RYTKGKIVVLSSAASWLTAPRMSFYNASKAALVLFFETLRVELGSD- 218
              +R A+ +      KG ++ +SS    +  P    Y ASK  + L  ETL +E     
Sbjct: 129 FLGSREAIKYFVENDIKGNVINMSSVHEMIPWPLFVHYAASKGGMKLMTETLALEYAPKG 188
Query: 219 VGVTIVTPGFIESELTQGKF 238
           + V  + PG + + +   KF
Sbjct: 189 IRVNNIGPGAMNTPINAEKF 208

>pdb|2ZTM|A Chain A, T190s Mutant Of D-3-Hydroxybutyrate Dehydrogenase Length = 260

Iteration: 1
 Score = 77.0 bits (188), Expect = 1e-14,   Method: Compositional matrix adjust.
 Identities = 59/195 (30%), Positives = 98/195 (50%), Gaps = 6/195 (3%)
Query: 45  VSGKVVIITGASSGIGEHLAYEYXXXXXXXXXXXXXEKS-LEEV-ADTAREIGSPDVITI 102
           + GKV ++TG++SGIG  +A                + + +E+V A  A + G   V+  
Sbjct: 2   LKGKVAVVTGSTSGIGLGIATALAAQGADIVLNGFGDAAEIEKVRAGLAAQHGV-KVLYD 60
Query: 103 RADVSKVDDCRSLVEETMNHFGRLDHLVNNAGISSVALFEDIVNITDFKQIMNINFWGSV 162
            AD+SK +  R LV+  +   GR+D LVNNAGI   AL ED      +  I+ +N     
Sbjct: 61  GADLSKGEAVRGLVDNAVRQMGRIDILVNNAGIQHTALIEDFPT-EKWDAILALNLSAVF 119
Query: 163 YTTRFAVPHLRYTK-GKIVVLSSAASWLTAPRMSFYNASKAALVLFFETLRVE-LGSDVG 220
           + T  A+PH++    G+I+ ++SA   + +   S Y A+K  +V F +   +E  G  + 
Sbjct: 120 HGTAAALPHMKKQGFGRIINIASAHGLVASANKSAYVAAKHGVVGFTKVTALETAGQGIT 179
Query: 221 VTIVTPGFIESELTQ 235
              + PG++ S L +
Sbjct: 180 ANAICPGWVRSPLVE 194

>pdb|2EW8|A Chain A, Crystal Structure Of The (s)-specific 1-phenylethanol Dehydrogenase Of The Denitrifying Bacterium Strain Ebn1 Length = 249

Iteration: 1
 Score = 76.6 bits (187), Expect = 1e-14,   Method: Compositional matrix adjust.
 Identities = 56/203 (27%), Positives = 98/203 (48%), Gaps = 8/203 (3%)
Query: 41  FSEDVSGKVVIITGASSGIGEHLAYEYXXXXXXXXXXXXXEKSLEEVADTAREIGSPDVI 100
            ++ +  K+ +ITG ++GIG  +A  +                  E A   R +G   V+
Sbjct: 1   MTQRLKDKLAVITGGANGIGRAIAERFAVEGADIAIADLVPAPEAEAA--IRNLGR-RVL 57
Query: 101 TIRADVSKVDDCRSLVEETMNHFGRLDHLVNNAGISSVALFEDIVNITDFKQIMNINFWG 160
           T++ DVS+  D  +  ++ ++ FGR D LVNNAGI  +  F+++     +K+   IN   
Sbjct: 58  TVKCDVSQPGDVEAFGKQVISTFGRCDILVNNAGIYPLIPFDEL-TFEQWKKTFEINVDS 116
Query: 161 SVYTTRFAVPHL-RYTKGKIVVLSSAASWLTAPRMSFYNASKAALVLFFETLRVELGSDV 219
                +  VP + R   G+I+ L+S   WL     + Y ++KAA + F   L  +LG D 
Sbjct: 117 GFLMAKAFVPGMKRNGWGRIINLTSTTYWLKIEAYTHYISTKAANIGFTRALASDLGKD- 175
Query: 220 GVTI--VTPGFIESELTQGKFLT 240
           G+T+  + P  + +  T+   L+
Sbjct: 176 GITVNAIAPSLVRTATTEASALS 198

>pdb|3OSU|A Chain A, Crystal Structure Of The 3-Oxoacyl-Acyl Carrier Protein Reductase, Fabg, From Staphylococcus Aureus Length = 246

Iteration: 1
 Score = 76.6 bits (187), Expect = 1e-14,   Method: Compositional matrix adjust.
 Identities = 60/195 (30%), Positives = 96/195 (49%), Gaps = 15/195 (7%)
Query: 48  KVVIITGASSGIGEHLAYE-----YXXXXXXXXXXXXXEKSLEEVADTAREIGSPDVITI 102
           K  ++TGAS GIG  +A +     Y             E  +EE+   A+ +   D   I
Sbjct: 5   KSALVTGASRGIGRSIALQLAEEGYNVAVNYAGSKEKAEAVVEEI--KAKGV---DSFAI 59
Query: 103 RADVSKVDDCRSLVEETMNHFGRLDHLVNNAGISSVALFEDIVNITDFKQIMNINFWGSV 162
           +A+V+  D+ ++ ++E ++ FG LD LVNNAGI+   L        ++  +++ N  G  
Sbjct: 60  QANVADADEVKAXIKEVVSQFGSLDVLVNNAGITRDNLLXRXKE-QEWDDVIDTNLKGVF 118
Query: 163 YTTRFAVPH-LRYTKGKIVVLSSAASWLTAPRMSFYNASKAALVLFFETLRVELGSDVGV 221
              + A P  LR   G I+ LSS    +  P  + Y A+KA ++   ++   EL S  G+
Sbjct: 119 NCIQKATPQXLRQRSGAIINLSSVVGAVGNPGQANYVATKAGVIGLTKSAARELASR-GI 177
Query: 222 TI--VTPGFIESELT 234
           T+  V PGFI S+ T
Sbjct: 178 TVNAVAPGFIVSDXT 192

>pdb|3F9I|A Chain A, Crystal Structure Of 3-Ketoacyl-(Acyl-Carrier-Protein) Reductase Rickettsia Prowazekii Length = 249

Iteration: 1
 Score = 76.3 bits (186), Expect = 1e-14,   Method: Compositional matrix adjust.
 Identities = 60/196 (30%), Positives = 104/196 (53%), Gaps = 17/196 (8%)
Query: 44  DVSGKVVIITGASSGIGEHLAYEYXXXXXXXXXXXXXEKSLEEVADTAREIGSPDVITIR 103
           D++GK  +ITGASSGIG  +A                E+ L+ + +  ++  + +V    
Sbjct: 11  DLTGKTSLITGASSGIGSAIARLLHKLGSKVIISGSNEEKLKSLGNALKDNYTIEV---- 66
Query: 104 ADVSKVDDCRSLVEETMNHFGRLDHLVNNAGISSVALFEDIVNITDFKQIMNINFWGSVY 163
            +++  ++C +L+ +T N    LD LV NAGI+S  L   + +  DF ++++IN   +  
Sbjct: 67  CNLANKEECSNLISKTSN----LDILVCNAGITSDTLAIRMKD-QDFDKVIDINLKANFI 121
Query: 164 TTRFAVPHL---RYTKGKIVVLSSAASWLTAPRMSFYNASKAALVLFFETLRVELGSDVG 220
             R A+  +   RY  G+I+ +SS       P  + Y ASKA L+   ++L  E+ +  G
Sbjct: 122 LNREAIKKMIQKRY--GRIINISSIVGIAGNPGQANYCASKAGLIGMTKSLSYEVATR-G 178
Query: 221 VTI--VTPGFIESELT 234
           +T+  V PGFI+S++T
Sbjct: 179 ITVNAVAPGFIKSDMT 194

>pdb|3IS3|A Chain A, Crystal Structure Of 17beta-Hydroxysteroid Dehydrogenase (Apo Form) From Fungus Cochliobolus Lunatus Length = 270

Iteration: 1
 Score = 76.3 bits (186), Expect = 2e-14,   Method: Compositional matrix adjust.
 Identities = 56/184 (30%), Positives = 89/184 (48%), Gaps = 6/184 (3%)
Query: 47  GKVVIITGASSGIGEHLAYEYXXXXXXXXXXXXXE-KSLEEVADTAREIGSPDVITIRAD 105
           GKV ++TG+  GIG  +A                  K  E+V    + +GS D I I+AD
Sbjct: 18  GKVALVTGSGRGIGAAVAVHLGRLGAKVVVNYANSTKDAEKVVSEIKALGS-DAIAIKAD 76
Query: 106 VSKVDDCRSLVEETMNHFGRLDHLVNNAGISSVALFEDIVNITDFKQIMNINFWGSVYTT 165
           + +V +   L ++ + HFG LD  V+N+G+ S    +D+    +F ++ ++N  G  +  
Sbjct: 77  IRQVPEIVKLFDQAVAHFGHLDIAVSNSGVVSFGHLKDVTE-EEFDRVFSLNTRGQFFVA 135
Query: 166 RFAVPHLRYTKGKIVVLSSAASW-LTAPRMSFYNASKAALVLFFETLRVELG-SDVGVTI 223
           R A  HL    G+IV+ SS  S   + P+ S Y+ SK A+  F      + G   + V  
Sbjct: 136 REAYRHLT-EGGRIVLTSSNTSKDFSVPKHSLYSGSKGAVDSFVRIFSKDCGDKKITVNA 194
Query: 224 VTPG 227
           V PG
Sbjct: 195 VAPG 198

>pdb|2ZTU|A Chain A, T190a Mutant Of D-3-Hydroxybutyrate Dehydrogenase Complexed With Nad+ Length = 260

Iteration: 1
 Score = 75.9 bits (185), Expect = 2e-14,   Method: Compositional matrix adjust.
 Identities = 58/195 (29%), Positives = 98/195 (50%), Gaps = 6/195 (3%)
Query: 45  VSGKVVIITGASSGIGEHLAYEYXXXXXXXXXXXXXEKS-LEEV-ADTAREIGSPDVITI 102
           + GKV ++TG++SGIG  +A                + + +E+V A  A + G   V+  
Sbjct: 2   LKGKVAVVTGSTSGIGLGIATALAAQGADIVLNGFGDAAEIEKVRAGLAAQHGV-KVLYD 60
Query: 103 RADVSKVDDCRSLVEETMNHFGRLDHLVNNAGISSVALFEDIVNITDFKQIMNINFWGSV 162
            AD+SK +  R LV+  +   GR+D LVNNAGI   AL ED      +  I+ +N     
Sbjct: 61  GADLSKGEAVRGLVDNAVRQMGRIDILVNNAGIQHTALIEDFPT-EKWDAILALNLSAVF 119
Query: 163 YTTRFAVPHLRYTK-GKIVVLSSAASWLTAPRMSFYNASKAALVLFFETLRVE-LGSDVG 220
           + T  A+PH++    G+I+ ++SA   + +   S Y A+K  +V F +   +E  G  + 
Sbjct: 120 HGTAAALPHMKKQGFGRIINIASAHGLVASANKSAYVAAKHGVVGFTKVTALETAGQGIT 179
Query: 221 VTIVTPGFIESELTQ 235
              + PG++ + L +
Sbjct: 180 ANAICPGWVRAPLVE 194

>pdb|1HDC|A Chain A, Mechanism Of Inhibition Of 3alpha,20beta-Hydroxysteroid Dehydrogenase By A Licorice-Derived Steroidal Inhibitor Length = 254

Iteration: 1
 Score = 75.9 bits (185), Expect = 2e-14,   Method: Compositional matrix adjust.
 Identities = 67/204 (32%), Positives = 99/204 (48%), Gaps = 10/204 (4%)
Query: 44  DVSGKVVIITGASSGIGEHLAYEYXXXXXXXXXXXXXEKSLEEVADTAREIGSPDVITIR 103
           D+SGK VIITG + G+G   A +              +   EE A TARE+G        
Sbjct: 2   DLSGKTVIITGGARGLGAEAARQAVAAGARVVLADVLD---EEGAATARELGDAARYQ-H 57
Query: 104 ADVSKVDDCRSLVEETMNHFGRLDHLVNNAGISSVALFEDIVNITDFKQIMNINFWGSVY 163
            DV+  +D + +V      FG +D LVNNAGIS+  +F +  ++  F++++ IN  G   
Sbjct: 58  LDVTIEEDWQRVVAYAREEFGSVDGLVNNAGIST-GMFLETESVERFRKVVEINLTGVFI 116
Query: 164 TTRFAVPHLR-YTKGKIVVLSSAASWLTAPRMSFYNASKAALVLFFETLRVELGSD-VGV 221
             +  +P ++    G IV +SSAA  +     S Y ASK  +    +   VELG+D + V
Sbjct: 117 GMKTVIPAMKDAGGGSIVNISSAAGLMGLALTSSYGASKWGVRGLSKLAAVELGTDRIRV 176
Query: 222 TIVTPGFIESELTQGKFLTGRRQN 245
             V PG   + +T     TG RQ 
Sbjct: 177 NSVHPGMTYTPMTA---ETGIRQG 197

>pdb|1WMB|A Chain A, Crystal Structure Of Nad Dependent D-3-Hydroxybutylate Dehydrogenase Length = 260

Iteration: 1
 Score = 75.9 bits (185), Expect = 2e-14,   Method: Compositional matrix adjust.
 Identities = 58/195 (29%), Positives = 98/195 (50%), Gaps = 6/195 (3%)
Query: 45  VSGKVVIITGASSGIGEHLAYEYXXXXXXXXXXXXXEKS-LEEV-ADTAREIGSPDVITI 102
           + GKV ++TG++SGIG  +A                + + +E+V A  A + G   V+  
Sbjct: 2   LKGKVAVVTGSTSGIGLGIATALAAQGADIVLNGFGDAAEIEKVRAGLAAQHGV-KVLYD 60
Query: 103 RADVSKVDDCRSLVEETMNHFGRLDHLVNNAGISSVALFEDIVNITDFKQIMNINFWGSV 162
            AD+SK +  R LV+  +   GR+D LVNNAGI   AL ED      +  I+ +N     
Sbjct: 61  GADLSKGEAVRGLVDNAVRQMGRIDILVNNAGIQHTALIEDFPT-EKWDAILALNLSAVF 119
Query: 163 YTTRFAVPHLRYTK-GKIVVLSSAASWLTAPRMSFYNASKAALVLFFETLRVE-LGSDVG 220
           + T  A+PH++    G+I+ ++SA   + +   S Y A+K  +V F +   +E  G  + 
Sbjct: 120 HGTAAALPHMKKQGFGRIINIASAHGLVASANKSAYVAAKHGVVGFTKVTALETAGQGIT 179
Query: 221 VTIVTPGFIESELTQ 235
              + PG++ + L +
Sbjct: 180 ANAICPGWVRTPLVE 194

>pdb|2HSD|A Chain A, The Refined Three-Dimensional Structure Of 3alpha,20beta- Hydroxysteroid Dehydrogenase And Possible Roles Of The Residues Conserved In Short-Chain Dehydrogenases Length = 253

Iteration: 1
 Score = 75.9 bits (185), Expect = 2e-14,   Method: Compositional matrix adjust.
 Identities = 67/204 (32%), Positives = 99/204 (48%), Gaps = 10/204 (4%)
Query: 44  DVSGKVVIITGASSGIGEHLAYEYXXXXXXXXXXXXXEKSLEEVADTAREIGSPDVITIR 103
           D+SGK VIITG + G+G   A +              +   EE A TARE+G        
Sbjct: 2   DLSGKTVIITGGARGLGAEAARQAVAAGARVVLADVLD---EEGAATARELGDAARYQ-H 57
Query: 104 ADVSKVDDCRSLVEETMNHFGRLDHLVNNAGISSVALFEDIVNITDFKQIMNINFWGSVY 163
            DV+  +D + +V      FG +D LVNNAGIS+  +F +  ++  F++++ IN  G   
Sbjct: 58  LDVTIEEDWQRVVAYAREEFGSVDGLVNNAGIST-GMFLETESVERFRKVVEINLTGVFI 116
Query: 164 TTRFAVPHLR-YTKGKIVVLSSAASWLTAPRMSFYNASKAALVLFFETLRVELGSD-VGV 221
             +  +P ++    G IV +SSAA  +     S Y ASK  +    +   VELG+D + V
Sbjct: 117 GMKTVIPAMKDAGGGSIVNISSAAGLMGLALTSSYGASKWGVRGLSKLAAVELGTDRIRV 176
Query: 222 TIVTPGFIESELTQGKFLTGRRQN 245
             V PG   + +T     TG RQ 
Sbjct: 177 NSVHPGMTYTPMTA---ETGIRQG 197

>pdb|4FN4|A Chain A, Short-chain Nad(h)-dependent Dehydrogenase/reductase From Sulfolobus Acidocaldarius Length = 254

Iteration: 1
 Score = 75.5 bits (184), Expect = 3e-14,   Method: Compositional matrix adjust.
 Identities = 55/199 (27%), Positives = 97/199 (48%), Gaps = 9/199 (4%)
Query: 43  EDVSGKVVIITGASSGIGEHLAYEYXXXXXXXXXXXXXEKSLEEVADTAREIGSPDVITI 102
           + +  KVVI+TGA SGIG  +A ++             E  L ++    R +G  +V+ +
Sbjct: 3   QSLKNKVVIVTGAGSGIGRAIAKKFALNDSIVVAVELLEDRLNQIVQELRGMGK-EVLGV 61
Query: 103 RADVSKVDDCRSLVEETMNHFGRLDHLVNNAGISSVALFEDIVNITD--FKQIMNINFWG 160
           +ADVSK  D    V  T   + R+D L NNAGI  +     +  ++D  +++++ +N + 
Sbjct: 62  KADVSKKKDVEEFVRRTFETYSRIDVLCNNAGI--MDGVTPVAEVSDELWERVLAVNLYS 119
Query: 161 SVYTTRFAVP-HLRYTKGKIVVLSSAASWLTAPRMSFYNASKAALVLFFETLRVELGSDV 219
           + Y++R  +P  L+  KG IV  +S A        + Y  +K  L+    ++    G D 
Sbjct: 120 AFYSSRAVIPIMLKQGKGVIVNTASIAGIRGGFAGAPYTVAKHGLIGLTRSIAAHYG-DQ 178
Query: 220 GVTIVT--PGFIESELTQG 236
           G+  V   PG +++ +  G
Sbjct: 179 GIRAVAVLPGTVKTNIGLG 197

>pdb|4DML|A Chain A, 3-Oxoacyl-[acyl-Carrier-Protein] Reductase From Synechococcus Elongatus Pcc 7942 Length = 269

Iteration: 1
 Score = 75.5 bits (184), Expect = 3e-14,   Method: Compositional matrix adjust.
 Identities = 53/190 (27%), Positives = 94/190 (49%), Gaps = 5/190 (2%)
Query: 48  KVVIITGASSGIGEHLAYEYXXXXXXXXXXXXXEKSLEEVADTAREIGSPDVITIRADVS 107
           ++ ++TGAS GIG  +A E                   +    A      +   ++ADVS
Sbjct: 29  RIALVTGASRGIGRAIALELAAAGAKVAVNYASSAGAADEVVAAIAAAGGEAFAVKADVS 88
Query: 108 KVDDCRSLVEETMNHFGRLDHLVNNAGISSVALFEDIVNITDFKQIMNINFWGSVYTTRF 167
           +  +  +L    +  +GRLD LVNNAGI+   L   +    D++ ++++N  G    +R 
Sbjct: 89  QESEVEALFAAVIERWGRLDVLVNNAGITRDTLLLRMKR-DDWQSVLDLNLGGVFLCSRA 147
Query: 168 AVP-HLRYTKGKIVVLSSAASWLTAPRMSFYNASKAALVLFFETLRVELGSDVGVTI--V 224
           A    L+   G+I+ ++S    +  P  + Y+A+KA ++   +T+  EL S  G+T+  V
Sbjct: 148 AAKIMLKQRSGRIINIASVVGEMGNPGQANYSAAKAGVIGLTKTVAKELASR-GITVNAV 206
Query: 225 TPGFIESELT 234
            PGFI +++T
Sbjct: 207 APGFIATDMT 216

>pdb|3RKU|A Chain A, Substrate Fingerprint And The Structure Of Nadp+ Dependent Serine Dehydrogenase From Saccharomyces Cerevisiae Complexed With Nadp+ Length = 287

Iteration: 1
 Score = 75.1 bits (183), Expect = 4e-14,   Method: Compositional matrix adjust.
 Identities = 59/202 (29%), Positives = 96/202 (47%), Gaps = 12/202 (5%)
Query: 42  SEDVSGKVVIITGASSGIGEHLAYEYXXXXXXXXXXXXXEKSLEEVADTAR----EIGSP 97
           +E ++ K V+ITGAS+GIG+  A EY              + LE++ +  +    E  + 
Sbjct: 28  AERLAKKTVLITGASAGIGKATALEYLEASNGDMKLILAARRLEKLEELKKTIDQEFPNA 87
Query: 98  DVITIRADVSKVDDCRSLVEETMNHFGRLDHLVNNAGISSVALFEDIVN---ITDFKQIM 154
            V   + D+++ +  +  +E     F  +D LVNNAG    AL  D V      D + + 
Sbjct: 88  KVHVAQLDITQAEKIKPFIENLPQEFKDIDILVNNAG---KALGSDRVGQIATEDIQDVF 144
Query: 155 NINFWGSVYTTRFAVPHLR-YTKGKIVVLSSAASWLTAPRMSFYNASKAALVLFFETLRV 213
           + N    +  T+  +P  +    G IV L S A     P  S Y ASK A+  F ++LR 
Sbjct: 145 DTNVTALINITQAVLPIFQAKNSGDIVNLGSIAGRDAYPTGSIYCASKFAVGAFTDSLRK 204
Query: 214 EL-GSDVGVTIVTPGFIESELT 234
           EL  + + V ++ PG +E+E +
Sbjct: 205 ELINTKIRVILIAPGLVETEFS 226

>pdb|1YB1|A Chain A, Crystal Structure Of Human 17-Beta-Hydroxysteroid Dehydrogenase Type Xi Length = 272

Iteration: 1
 Score = 74.7 bits (182), Expect = 4e-14,   Method: Compositional matrix adjust.
 Identities = 59/196 (30%), Positives = 93/196 (47%), Gaps = 11/196 (5%)
Query: 43  EDVSGKVVIITGASSGIGEHLAYEYXXXXXXXXXXXXXEKSLEEVADTAREIGSPDVITI 102
           + V+G++V+ITGA  GIG   AYE+             +  LEE A   + +G+  V T 
Sbjct: 27  KSVTGEIVLITGAGHGIGRLTAYEFAKLKSKLVLWDINKHGLEETAAKCKGLGA-KVHTF 85
Query: 103 RADVSKVDDCRSLVEETMNHFGRLDHLVNNAGISSVALFEDIVNITD--FKQIMNINFWG 160
             D S  +D  S  ++     G +  LVNNAG   V    D+    D   ++   +N   
Sbjct: 86  VVDCSNREDIYSSAKKVKAEIGDVSILVNNAG---VVYTSDLFATQDPQIEKTFEVNVLA 142
Query: 161 SVYTTRFAVPHL-RYTKGKIVVLSSAASWLTAPRMSFYNASKAALVLFFETLRVELG--- 216
             +TT+  +P + +   G IV ++SAA  ++ P +  Y +SK A V F +TL  EL    
Sbjct: 143 HFWTTKAFLPAMTKNNHGHIVTVASAAGHVSVPFLLAYCSSKFAAVGFHKTLTDELAALQ 202
Query: 217 -SDVGVTIVTPGFIES 231
            + V  T + P F+ +
Sbjct: 203 ITGVKTTCLCPNFVNT 218

>pdb|3GRP|A Chain A, 2.1 Angstrom Crystal Structure Of 3-Ketoacyl-(Acyl-Carrier-Protein) Reductase From Bartonella Henselae Length = 266

Iteration: 1
 Score = 74.7 bits (182), Expect = 5e-14,   Method: Compositional matrix adjust.
 Identities = 55/192 (28%), Positives = 96/192 (50%), Gaps = 7/192 (3%)
Query: 45  VSGKVVIITGASSGIGEHLAYEYXXXXXXXXXXXXXEKSLEEVADTAREIGSPDVITIRA 104
           ++G+  ++TGA+ GIGE +A  +             E  L+E+A    ++G  DV    A
Sbjct: 25  LTGRKALVTGATGGIGEAIARCFHAQGAIVGLHGTREDKLKEIA---ADLGK-DVFVFSA 80
Query: 105 DVSKVDDCRSLVEETMNHFGRLDHLVNNAGISSVALFEDIVNITDFKQIMNINFWGSVYT 164
           ++S     + L E        +D LVNNAGI+   LF  + +  D+  ++ +N   +   
Sbjct: 81  NLSDRKSIKQLAEVAEREMEGIDILVNNAGITRDGLFVRMQD-QDWDDVLAVNLTAASTL 139
Query: 165 TRFAV-PHLRYTKGKIVVLSSAASWLTAPRMSFYNASKAALVLFFETLRVELGS-DVGVT 222
           TR  +   +R   G+I+ ++S    +  P  + Y A+KA L+ F + L  E+ S ++ V 
Sbjct: 140 TRELIHSMMRRRYGRIINITSIVGVVGNPGQTNYCAAKAGLIGFSKALAQEIASRNITVN 199
Query: 223 IVTPGFIESELT 234
            + PGFI+S +T
Sbjct: 200 CIAPGFIKSAMT 211

>pdb|3ITD|A Chain A, Crystal Structure Of An Inactive 17beta-Hydroxysteroid Dehydrogenase (Y167f Mutated Form) From Fungus Cochliobolus Lunatus Length = 270

Iteration: 1
 Score = 74.3 bits (181), Expect = 5e-14,   Method: Compositional matrix adjust.
 Identities = 55/184 (29%), Positives = 89/184 (48%), Gaps = 6/184 (3%)
Query: 47  GKVVIITGASSGIGEHLAYEYXXXXXXXXXXXXXE-KSLEEVADTAREIGSPDVITIRAD 105
           GKV ++TG+  GIG  +A                  K  E+V    + +GS D I I+AD
Sbjct: 18  GKVALVTGSGRGIGAAVAVHLGRLGAKVVVNYANSTKDAEKVVSEIKALGS-DAIAIKAD 76
Query: 106 VSKVDDCRSLVEETMNHFGRLDHLVNNAGISSVALFEDIVNITDFKQIMNINFWGSVYTT 165
           + +V +   L ++ + HFG LD  V+N+G+ S    +D+    +F ++ ++N  G  +  
Sbjct: 77  IRQVPEIVKLFDQAVAHFGHLDIAVSNSGVVSFGHLKDVTE-EEFDRVFSLNTRGQFFVA 135
Query: 166 RFAVPHLRYTKGKIVVLSSAASW-LTAPRMSFYNASKAALVLFFETLRVELG-SDVGVTI 223
           R A  HL    G+IV+ SS  S   + P+ S ++ SK A+  F      + G   + V  
Sbjct: 136 REAYRHLT-EGGRIVLTSSNTSKDFSVPKHSLFSGSKGAVDSFVRIFSKDCGDKKITVNA 194
Query: 224 VTPG 227
           V PG
Sbjct: 195 VAPG 198

>pdb|1EDO|A Chain A, The X-Ray Structure Of Beta-Keto Acyl Carrier Protein Reductase From Brassica Napus Complexed With Nadp+ Length = 244

Iteration: 1
 Score = 74.3 bits (181), Expect = 5e-14,   Method: Compositional matrix adjust.
 Identities = 55/189 (29%), Positives = 97/189 (51%), Gaps = 5/189 (2%)
Query: 49  VVIITGASSGIGEHLAYEYXXXXXXXXXX-XXXEKSLEEVADTAREIGSPDVITIRADVS 107
           VV++TGAS GIG+ +A                  K+ EEV+      G    IT   DVS
Sbjct: 3   VVVVTGASRGIGKAIALSLGKAGCKVLVNYARSAKAAEEVSKQIEAYGG-QAITFGGDVS 61
Query: 108 KVDDCRSLVEETMNHFGRLDHLVNNAGISSVALFEDIVNITDFKQIMNINFWGSVYTTRF 167
           K  D  ++++  ++ +G +D +VNNAGI+   L   +   + + +++++N  G    T+ 
Sbjct: 62  KEADVEAMMKTAIDAWGTIDVVVNNAGITRDTLLIRMKK-SQWDEVIDLNLTGVFLCTQA 120
Query: 168 AVP-HLRYTKGKIVVLSSAASWLTAPRMSFYNASKAALVLFFETLRVELGS-DVGVTIVT 225
           A    ++  KG+I+ ++S    +     + Y A+KA ++ F +T   E  S ++ V +V 
Sbjct: 121 ATKIMMKKRKGRIINIASVVGLIGNIGQANYAAAKAGVIGFSKTAAREGASRNINVNVVC 180
Query: 226 PGFIESELT 234
           PGFI S++T
Sbjct: 181 PGFIASDMT 189

>pdb|3FTP|A Chain A, Crystal Structure Of 3-Ketoacyl-(Acyl-Carrier-Protein) Reductase From Burkholderia Pseudomallei At 2.05 A Resolution Length = 270

Iteration: 1
 Score = 73.9 bits (180), Expect = 7e-14,   Method: Compositional matrix adjust.
 Identities = 57/194 (29%), Positives = 92/194 (47%), Gaps = 10/194 (5%)
Query: 48  KVVIITGASSGIGEHLAYEYXXXXXXXXXXXXXEKSLEEVADTAREIGSPDVITIRADVS 107
           +V I+TGAS GIG  +A E              E   E +    ++ G    +  R  V 
Sbjct: 29  QVAIVTGASRGIGRAIALELARRGAMVIGTATTEAGAEGIGAAFKQAG----LEGRGAVL 84
Query: 108 KVDDCRS---LVEETMNHFGRLDHLVNNAGISSVALFEDIVNITDFKQIMNINFWGSVYT 164
            V+D  +   LVE T+  FG L+ LVNNAGI+   L   + +  ++  +++ N       
Sbjct: 85  NVNDATAVDALVESTLKEFGALNVLVNNAGITQDQLAMRMKD-DEWDAVIDTNLKAVFRL 143
Query: 165 TRFAV-PHLRYTKGKIVVLSSAASWLTAPRMSFYNASKAALVLFFETLRVELGS-DVGVT 222
           +R  + P ++   G+IV ++S       P    Y A+KA +      L  E+GS  + V 
Sbjct: 144 SRAVLRPMMKARGGRIVNITSVVGSAGNPGQVNYAAAKAGVAGMTRALAREIGSRGITVN 203
Query: 223 IVTPGFIESELTQG 236
            V PGFI++++T+G
Sbjct: 204 CVAPGFIDTDMTKG 217

>pdb|3NUG|A Chain A, Crystal Structure Of Wild Type Tetrameric Pyridoxal 4-Dehydrogenase From Mesorhizobium Loti Length = 247

Iteration: 1
 Score = 73.9 bits (180), Expect = 7e-14,   Method: Compositional matrix adjust.
 Identities = 54/198 (27%), Positives = 94/198 (47%), Gaps = 16/198 (8%)
Query: 42  SEDVSGKVVIITGASSGIGE----HLAYEYXXXXXXXXXXXXXEKSLEEVADTAREIGSP 97
           +E ++GK  ++TGA+ GIG+     LA +              + +   +   AR I   
Sbjct: 1   TERLAGKTALVTGAAQGIGKAIAARLAADGATVIVSDINAEGAKAAAASIGKKARAIA-- 58
Query: 98  DVITIRADVSKVDDCRSLVEETMNHFGRLDHLVNNAGISSVALFEDIVNITDFKQIMNIN 157
                 AD+S     ++L  E     G +D LVNNA I     ++D V++  +++I+++N
Sbjct: 59  ------ADISDPGSVKALFAEIQALTGGIDILVNNASIVPFVAWDD-VDLDHWRKIIDVN 111
Query: 158 FWGSVYTTRFAVPHLRYT--KGKIVVLSSAASWLTAPRMSFYNASKAALVLFFETLRVEL 215
             G+   TR     +R     G+++ ++S   +   P M+ Y A+K  ++ F   L  EL
Sbjct: 112 LTGTFIVTRAGTDQMRAAGKAGRVISIASNTFFAGTPNMAAYVAAKGGVIGFTRALATEL 171
Query: 216 GS-DVGVTIVTPGFIESE 232
           G  ++    VTPG IES+
Sbjct: 172 GKYNITANAVTPGLIESD 189

>pdb|1XKQ|A Chain A, Crystal Structure Of Short-Chain DehydrogenaseREDUCTASE OF Unknown Function From Caenorhabditis Elegans With Cofactor Length = 280

Iteration: 1
 Score = 73.9 bits (180), Expect = 8e-14,   Method: Compositional matrix adjust.
 Identities = 58/196 (29%), Positives = 92/196 (46%), Gaps = 7/196 (3%)
Query: 46  SGKVVIITGASSGIGEHLAYEYXXXXXXXXXXXXXEKSLEEVADTAREIG--SPDVITIR 103
           S K VIITG+S+GIG   A  +              + LEE      + G     V ++ 
Sbjct: 5   SNKTVIITGSSNGIGRTTAILFAQEGANVTITGRSSERLEETRQIILKSGVSEKQVNSVV 64
Query: 104 ADVSKVDDCRSLVEETMNHFGRLDHLVNNAGISSVALFEDI---VNITDFKQIMNINFWG 160
           ADV+  D    ++  T+  FG++D LVNNAG +    F        I  + + + +N   
Sbjct: 65  ADVTTEDGQDQIINSTLKQFGKIDVLVNNAGAAIPDAFGTTGTDQGIDIYHKTLKLNLQA 124
Query: 161 SVYTTRFAVPHLRYTKGKIVVLSSAASWLTA-PRMSFYNASKAALVLFFETLRVELGS-D 218
            +  T+   PHL  +KG+IV +SS  +   A P   +Y  +KAAL  +  +  ++L    
Sbjct: 125 VIEMTKKVKPHLVASKGEIVNVSSIVAGPQAQPDFLYYAIAKAALDQYTRSTAIDLAKFG 184
Query: 219 VGVTIVTPGFIESELT 234
           + V  V+PG +E+  T
Sbjct: 185 IRVNSVSPGMVETGFT 200

>pdb|2ZK7|A Chain A, Structure Of A C-Terminal Deletion Mutant Of Thermoplasma Acidophilum Aldohexose Dehydrogenase (Aldt) Length = 257

Iteration: 1
 Score = 72.4 bits (176), Expect = 2e-13,   Method: Compositional matrix adjust.
 Identities = 49/193 (25%), Positives = 96/193 (49%), Gaps = 14/193 (7%)
Query: 44  DVSGKVVIITGASSGIGEHLAYEYXXXXXXXXXXXXXEKSLEEVADTAREIGSPDVITIR 103
           D+  KVVI+TGAS GIG  +A  +             ++  + +  +  + G      I 
Sbjct: 12  DLRDKVVIVTGASMGIGRAIAERFV------------DEGSKVIDLSIHDPGEAKYDHIE 59
Query: 104 ADVSKVDDCRSLVEETMNHFGRLDHLVNNAGISSVALFEDIVNITDFKQIMNINFWGSVY 163
            DV+  D  ++ ++     +G +  LVNNAGI S    E + ++ ++++I+++N +G  Y
Sbjct: 60  CDVTNPDQVKASIDHIFKEYGSISVLVNNAGIESYGKIESM-SMGEWRRIIDVNLFGYYY 118
Query: 164 TTRFAVPHL-RYTKGKIVVLSSAASWLTAPRMSFYNASKAALVLFFETLRVELGSDVGVT 222
            ++FA+P++ R     IV +SS  + +     S Y  SK A++   +++ ++    +   
Sbjct: 119 ASKFAIPYMIRSRDPSIVNISSVQASIITKNASAYVTSKHAVIGLTKSIALDYAPLLRCN 178
Query: 223 IVTPGFIESELTQ 235
            V P  I++ L +
Sbjct: 179 AVCPATIDTPLVR 191

>pdb|3GED|A Chain A, Fingerprint And Structural Analysis Of A Apo Scor Enzyme From Clostridium Thermocellum Length = 247

Iteration: 1
 Score = 72.0 bits (175), Expect = 3e-13,   Method: Compositional matrix adjust.
 Identities = 55/195 (28%), Positives = 86/195 (44%), Gaps = 20/195 (10%)
Query: 50  VIITGASSGIGEHLAYEYXXXXXXXXXXXXXEKSLEEVADTAREIGSPDVITIRADVSKV 109
           VI+TG   GIG+ +  ++             EK     AD A+E   P++     DV+  
Sbjct: 5   VIVTGGGHGIGKQICLDFLEAGDKVCFIDIDEK---RSADFAKE--RPNLFYFHGDVADP 59
Query: 110 DDCRSLVEETMNHFGRLDHLVNNA-----GISSVALFEDIVNITDFKQIMNINFWGSVYT 164
              +  VE  M    R+D LVNNA     GI S  L+E+      F  I+++        
Sbjct: 60  LTLKKFVEYAMEKLQRIDVLVNNACRGSKGILSSLLYEE------FDYILSVGLKAPYEL 113
Query: 165 TRFAVPHLRYTKGKIVVLSSAASWLTAPRMSFYNASKAALVLFFETLRVELGSDVGVTIV 224
           +R     L   KG+I+ ++S  ++ + P    Y ++K  +V     L + LG DV V  +
Sbjct: 114 SRLCRDELIKNKGRIINIASTRAFQSEPDSEAYASAKGGIVALTHALAMSLGPDVLVNCI 173
Query: 225 TPGFI----ESELTQ 235
            PG+I    + E TQ
Sbjct: 174 APGWINVTEQQEFTQ 188

>pdb|2DTD|A Chain A, Structure Of Thermoplasma Acidophilum Aldohexose Dehydrogenase (aldt) In Ligand-free Form Length = 264

Iteration: 1
 Score = 72.0 bits (175), Expect = 3e-13,   Method: Compositional matrix adjust.
 Identities = 49/193 (25%), Positives = 96/193 (49%), Gaps = 14/193 (7%)
Query: 44  DVSGKVVIITGASSGIGEHLAYEYXXXXXXXXXXXXXEKSLEEVADTAREIGSPDVITIR 103
           D+  KVVI+TGAS GIG  +A  +             ++  + +  +  + G      I 
Sbjct: 5   DLRDKVVIVTGASMGIGRAIAERFV------------DEGSKVIDLSIHDPGEAKYDHIE 52
Query: 104 ADVSKVDDCRSLVEETMNHFGRLDHLVNNAGISSVALFEDIVNITDFKQIMNINFWGSVY 163
            DV+  D  ++ ++     +G +  LVNNAGI S    E + ++ ++++I+++N +G  Y
Sbjct: 53  CDVTNPDQVKASIDHIFKEYGSISVLVNNAGIESYGKIESM-SMGEWRRIIDVNLFGYYY 111
Query: 164 TTRFAVPHL-RYTKGKIVVLSSAASWLTAPRMSFYNASKAALVLFFETLRVELGSDVGVT 222
            ++FA+P++ R     IV +SS  + +     S Y  SK A++   +++ ++    +   
Sbjct: 112 ASKFAIPYMIRSRDPSIVNISSVQASIITKNASAYVTSKHAVIGLTKSIALDYAPLLRCN 171
Query: 223 IVTPGFIESELTQ 235
            V P  I++ L +
Sbjct: 172 AVCPATIDTPLVR 184

>pdb|1NXQ|A Chain A, Crystal Structure Of R-Alcohol Dehydrogenase (Radh) (Apoenyzme) From Lactobacillus Brevis Length = 251

Iteration: 1
 Score = 72.0 bits (175), Expect = 3e-13,   Method: Compositional matrix adjust.
 Identities = 57/199 (28%), Positives = 96/199 (48%), Gaps = 12/199 (6%)
Query: 42  SEDVSGKVVIITGASSGIGEHLAYEYXXXXXXXXXXXXXEKSLEEVADTAREIGSPDVIT 101
           S  + GKV IITG + GIG  +A ++                 E+ A   + +G+PD I 
Sbjct: 1   SNRLDGKVAIITGGTLGIGLAIATKFVEEGAKVMITGRHSDVGEKAA---KSVGTPDQIQ 57
Query: 102 I-RADVSKVDDCRSLVEETMNHFGRLDHLVNNAGISSVALFEDIVNITDFKQIMNINFWG 160
             + D S  D    L + T   FG +  LVNNAGI+     E+     ++++++ +N  G
Sbjct: 58  FFQHDSSDEDGWTKLFDATEKAFGPVSTLVNNAGIAVNKSVEE-TTTAEWRKLLAVNLDG 116
Query: 161 SVYTTRFAVPHLRYTKG---KIVVLSSAASWLTAPRMSFYNASKAALVLFFETLRVELG- 216
             + TR  +  ++  KG    I+ +SS   ++  P +  YNASK A+ +  ++  ++   
Sbjct: 117 VFFGTRLGIQRMK-NKGLGASIINMSSIEGFVGDPSLGAYNASKGAVRIMSKSAALDCAL 175
Query: 217 --SDVGVTIVTPGFIESEL 233
              DV V  V PG+I++ L
Sbjct: 176 KDYDVRVNTVHPGYIKTPL 194

>pdb|1ZJY|A Chain A, Structure Of R-Specific Alcohol Dehydrogenase (Mutant G37d) From Lactobacillus Brevis In Complex With Phenylethanol And Nadh Length = 251

Iteration: 1
 Score = 72.0 bits (175), Expect = 3e-13,   Method: Compositional matrix adjust.
 Identities = 57/199 (28%), Positives = 96/199 (48%), Gaps = 12/199 (6%)
Query: 42  SEDVSGKVVIITGASSGIGEHLAYEYXXXXXXXXXXXXXEKSLEEVADTAREIGSPDVIT 101
           S  + GKV IITG + GIG  +A ++                 E+ A   + +G+PD I 
Sbjct: 1   SNRLDGKVAIITGGTLGIGLAIATKFVEEGAKVMITDRHSDVGEKAA---KSVGTPDQIQ 57
Query: 102 I-RADVSKVDDCRSLVEETMNHFGRLDHLVNNAGISSVALFEDIVNITDFKQIMNINFWG 160
             + D S  D    L + T   FG +  LVNNAGI+     E+     ++++++ +N  G
Sbjct: 58  FFQHDSSDEDGWTKLFDATEKAFGPVSTLVNNAGIAVNKSVEE-TTTAEWRKLLAVNLDG 116
Query: 161 SVYTTRFAVPHLRYTKG---KIVVLSSAASWLTAPRMSFYNASKAALVLFFETLRVELG- 216
             + TR  +  ++  KG    I+ +SS   ++  P +  YNASK A+ +  ++  ++   
Sbjct: 117 VFFGTRLGIQRMK-NKGLGASIINMSSIEGFVGDPSLGAYNASKGAVRIMSKSAALDCAL 175
Query: 217 --SDVGVTIVTPGFIESEL 233
              DV V  V PG+I++ L
Sbjct: 176 KDYDVRVNTVHPGYIKTPL 194

>pdb|1JA9|A Chain A, Crystal Structure Of 1,3,6,8-Tetrahydroxynaphthalene Reductase In Complex With Nadph And Pyroquilon Length = 274

Iteration: 1
 Score = 72.0 bits (175), Expect = 3e-13,   Method: Compositional matrix adjust.
 Identities = 46/156 (29%), Positives = 89/156 (57%), Gaps = 9/156 (5%)
Query: 82  KSLEEVADTAREIGSPDVITIRADVSKVDDCRSLVEETMNHFGRLDHLVNNAGISSVALF 141
           K+ EEV    +++G+  V  I+AD+SK  +  +L ++ ++HFG LD +++N+G+    ++
Sbjct: 57  KAAEEVVAELKKLGAQGV-AIQADISKPSEVVALFDKAVSHFGGLDFVMSNSGME---VW 112
Query: 142 EDIVNITD--FKQIMNINFWGSVYTTRFAVPHLRYTKGKIVVLSSAASWLTA-PRMSFYN 198
            D + +T   F ++ N+N  G  +  +  + H R   G+I++ SS A+ +T  P  + Y 
Sbjct: 113 CDELEVTQELFDKVFNLNTRGQFFVAQQGLKHCRRG-GRIILTSSIAAVMTGIPNHALYA 171
Query: 199 ASKAALVLFFETLRVELGSD-VGVTIVTPGFIESEL 233
            SKAA+  F     V+ G+  V V  + PG +++++
Sbjct: 172 GSKAAVEGFCRAFAVDCGAKGVTVNCIAPGGVKTDM 207

>pdb|3U5T|A Chain A, The Crystal Structure Of 3-Oxoacyl-[acyl-Carrier-Protein] Reductase From Sinorhizobium Meliloti Length = 267

Iteration: 1
 Score = 72.0 bits (175), Expect = 3e-13,   Method: Compositional matrix adjust.
 Identities = 63/197 (31%), Positives = 88/197 (44%), Gaps = 9/197 (4%)
Query: 48  KVVIITGASSGIGEHLAYEYXXXXXXXXXXXXXEKSL-EEVADTAREIGSPDVITIRADV 106
           KV I+TGAS GIG  +A                + +  EEVA      G    +T +ADV
Sbjct: 28  KVAIVTGASRGIGAAIAARLASDGFTVVINYAGKAAAAEEVAGKIEAAGG-KALTAQADV 86
Query: 107 SKVDDCRSLVEETMNHFGRLDHLVNNAGISSVALFEDIVNITDFKQIMNINFWGSVYTTR 166
           S     R L       FG +D LVNNAGI  +    +  +   F +++ +N  G+  T R
Sbjct: 87  SDPAAVRRLFATAEEAFGGVDVLVNNAGIXPLTTIAETGDAV-FDRVIAVNLKGTFNTLR 145
Query: 167 FAVPHLRYTKGKIVVLSSAASWLTAPRMSFYNASKAALVLFFETLRVEL-GSDVGVTIVT 225
            A   LR   G+I+  S++   L  P    Y A+KA +      L  EL G D+ V  V 
Sbjct: 146 EAAQRLR-VGGRIINXSTSQVGLLHPSYGIYAAAKAGVEAXTHVLSKELRGRDITVNAVA 204
Query: 226 PGFIESELTQGKFLTGR 242
           PG   ++L    FL G+
Sbjct: 205 PGPTATDL----FLEGK 217

>pdb|3TJR|A Chain A, Crystal Structure Of A Rv0851c Ortholog Short Chain Dehydrogenase From Mycobacterium Paratuberculosis Length = 301

Iteration: 1
 Score = 71.2 bits (173), Expect = 5e-13,   Method: Compositional matrix adjust.
 Identities = 51/196 (26%), Positives = 92/196 (46%), Gaps = 5/196 (2%)
Query: 41  FSEDVSGKVVIITGASSGIGEHLAYEYXXXXXXXXXXXXXEKSLEEVADTAREIGSPDVI 100
           F     G+  ++TG +SGIG   A E+             + +LE+  +  R  G  D  
Sbjct: 25  FLSGFDGRAAVVTGGASGIGLATATEFARRGARLVLSDVDQPALEQAVNGLRGQGF-DAH 83
Query: 101 TIRADVSKVDDCRSLVEETMNHFGRLDHLVNNAGISSVALFEDIVNITDFKQIMNINFWG 160
            +  DV  +D+   L +E     G +D + +NAGI        + N  D++ +++I+ WG
Sbjct: 84  GVVCDVRHLDEMVRLADEAFRLLGGVDVVFSNAGIVVAGPLAQM-NHDDWRWVIDIDLWG 142
Query: 161 SVYTTRFAVPHL--RYTKGKIVVLSSAASWLTAPRMSFYNASKAALVLFFETLRVELGSD 218
           S++     +P L  + T G I   +S A  +    +  Y  +K  +V   ETL  E+  +
Sbjct: 143 SIHAVEAFLPRLLEQGTGGHIAFTASFAGLVPNAGLGTYGVAKYGVVGLAETLAREVKPN 202
Query: 219 -VGVTIVTPGFIESEL 233
            +GV+++ P  +E++L
Sbjct: 203 GIGVSVLCPMVVETKL 218

>pdb|3TSC|A Chain A, Crystal Structure Of Short Chain Dehydrogenase Map_2410 From Mycobacterium Paratuberculosis Bound To Nad Length = 277

Iteration: 1
 Score = 71.2 bits (173), Expect = 5e-13,   Method: Compositional matrix adjust.
 Identities = 59/215 (27%), Positives = 94/215 (43%), Gaps = 16/215 (7%)
Query: 45  VSGKVVIITGASSGIGEHLAYEYXXXXXXXXXXXXXEK----------SLEEVADTAR-- 92
           + G+V  ITGA+ G G   A                 K          S +++++T R  
Sbjct: 9   LEGRVAFITGAARGQGRAHAVRMAAEGADIIAVDIAGKLPSCVPYDPASPDDLSETVRLV 68
Query: 93  EIGSPDVITIRADVSKVDDCRSLVEETMNHFGRLDHLVNNAGISSVALFEDIVNITDFKQ 152
           E  +  ++    D    D  R +V++ +   GRLD +V NAG+++   ++DI    DF+ 
Sbjct: 69  EAANRRIVAAVVDTRDFDRLRKVVDDGVAALGRLDIIVANAGVAAPQAWDDITP-EDFRD 127
Query: 153 IMNINFWGSVYTTRFAVPHL--RYTKGKIVVLSSAASWLTAPRMSFYNASKAALVLFFET 210
           +M+IN  G+  T     P +      G I+++SSAA     P M  Y ASK A+      
Sbjct: 128 VMDINVTGTWNTVMAGAPRIIEGGRGGSIILISSAAGMKMQPFMIHYTASKHAVTGLARA 187
Query: 211 LRVELGS-DVGVTIVTPGFIESELTQGKFLTGRRQ 244
              ELG   + V  V PG + + +  G  +T   Q
Sbjct: 188 FAAELGKHSIRVNSVHPGPVNTPMGSGDMVTAVGQ 222

>pdb|1AE1|A Chain A, Tropinone Reductase-I Complex With Nadp Length = 273

Iteration: 1
 Score = 71.2 bits (173), Expect = 5e-13,   Method: Compositional matrix adjust.
 Identities = 57/195 (29%), Positives = 94/195 (48%), Gaps = 7/195 (3%)
Query: 45  VSGKVVIITGASSGIGEHLAYEYXXXXXXXXXXXXXEKSLEEVADTAREIGSPDVITIRA 104
           + G   ++TG S GIG  +  E              EK L+E  +  RE G     ++  
Sbjct: 19  LKGTTALVTGGSKGIGYAIVEELAGLGARVYTCSRNEKELDECLEIWREKGLNVEGSVCD 78
Query: 105 DVSKVDDCRSLVEETMNHF--GRLDHLVNNAGISSVALFEDIVNITDFKQIMNINFWGSV 162
            +S+ +  R  + +T+ H   G+L+ LVNNAG+      +D     D+  IM  NF  + 
Sbjct: 79  LLSRTE--RDKLMQTVAHVFDGKLNILVNNAGVVIHKEAKDFTE-KDYNIIMGTNFEAAY 135
Query: 163 YTTRFAVPHLRYTK-GKIVVLSSAASWLTAPRMSFYNASKAALVLFFETLRVELGSD-VG 220
           + ++ A P L+ ++ G ++ LSS A +   P +S Y+ASK A+    ++L  E   D + 
Sbjct: 136 HLSQIAYPLLKASQNGNVIFLSSIAGFSALPSVSLYSASKGAINQMTKSLACEWAKDNIR 195
Query: 221 VTIVTPGFIESELTQ 235
           V  V PG I + L +
Sbjct: 196 VNSVAPGVILTPLVE 210

>pdb|1IPE|A Chain A, Tropinone Reductase-Ii Complexed With Nadph Length = 259

Iteration: 1
 Score = 71.2 bits (173), Expect = 5e-13,   Method: Compositional matrix adjust.
 Identities = 56/195 (28%), Positives = 90/195 (46%), Gaps = 5/195 (2%)
Query: 44  DVSGKVVIITGASSGIGEHLAYEYXXXXXXXXXXXXXEKSLEEVADTAREIGSPDVITIR 103
           ++ G   ++TG S GIG  +  E              +K L +     R  G     ++ 
Sbjct: 5   NLEGCTALVTGGSRGIGYGIVEELASLGASVYTCSRNQKELNDCLTQWRSKGFKVEASV- 63
Query: 104 ADVSKVDDCRSLVEETMNHF-GRLDHLVNNAGISSVALFEDIVNITDFKQIMNINFWGSV 162
            D+S   + + L+    NHF G+L+ LVNNAGI      +D   + D+  IM+INF  + 
Sbjct: 64  CDLSSRSERQELMNTVANHFHGKLNILVNNAGIVIYKEAKDYT-VEDYSLIMSINFEAAY 122
Query: 163 YTTRFAVPHLRYT-KGKIVVLSSAASWLTAPRMSFYNASKAALVLFFETLRVELGSD-VG 220
           + +  A P L+ + +G +V +SS +  L  P  + Y A+K A+      L  E   D + 
Sbjct: 123 HLSVLAHPFLKASERGNVVFISSVSGALAVPYEAVYGATKGAMDQLTRCLAFEWAKDNIR 182
Query: 221 VTIVTPGFIESELTQ 235
           V  V PG I + L +
Sbjct: 183 VNGVGPGVIATSLVE 197

>pdb|3QIV|A Chain A, Crystal Structure Of A Putative Short-Chain Dehydrogenase Or 3- Oxoacyl-[acyl-Carrier-Protein] Reductase From Mycobacterium Paratuberculosis Atcc Baa-968 K-10 Length = 253

Iteration: 1
 Score = 71.2 bits (173), Expect = 6e-13,   Method: Compositional matrix adjust.
 Identities = 52/189 (27%), Positives = 92/189 (48%), Gaps = 8/189 (4%)
Query: 48  KVVIITGASSGIGEHLAYEYXXXXXXXXXXXXXEKSLEEVADTAREIGSPDVITIRADVS 107
           KV I+TG+  GIG+  A                 ++ E VA      G    I++  DVS
Sbjct: 10  KVGIVTGSGGGIGQAYAEALAREGAAVVVADINAEAAEAVAKQIVADGG-TAISVAVDVS 68
Query: 108 KVDDCRSLVEETMNHFGRLDHLVNNAGISSVALFEDIVNITD--FKQIMNINFWGSVYTT 165
             +  +++ + T+  FG +D+LVNNA I      + ++ I    +K+ M++N  G+++ T
Sbjct: 69  DPESAKAMADRTLAEFGGIDYLVNNAAIFGGMKLDFLLTIDPEYYKKFMSVNLDGALWCT 128
Query: 166 RFAVPHL-RYTKGKIVVLSSAASWLTAPRMSFYNASKAALVLFFETLRVELGS-DVGVTI 223
           R     + +   G IV  SS A+WL +   ++Y  +K  +    + L  ELG  ++ +  
Sbjct: 129 RAVYKKMTKRGGGAIVNQSSTAAWLYS---NYYGLAKVGINGLTQQLSRELGGRNIRINA 185
Query: 224 VTPGFIESE 232
           + PG I++E
Sbjct: 186 IAPGPIDTE 194

>pdb|2AE2|A Chain A, Tropinone Reductase-Ii Complexed With Nadp+ And Pseudotropine Length = 260

Iteration: 1
 Score = 70.9 bits (172), Expect = 6e-13,   Method: Compositional matrix adjust.
 Identities = 56/195 (28%), Positives = 90/195 (46%), Gaps = 5/195 (2%)
Query: 44  DVSGKVVIITGASSGIGEHLAYEYXXXXXXXXXXXXXEKSLEEVADTAREIGSPDVITIR 103
           ++ G   ++TG S GIG  +  E              +K L +     R  G     ++ 
Sbjct: 6   NLEGCTALVTGGSRGIGYGIVEELASLGASVYTCSRNQKELNDCLTQWRSKGFKVEASV- 64
Query: 104 ADVSKVDDCRSLVEETMNHF-GRLDHLVNNAGISSVALFEDIVNITDFKQIMNINFWGSV 162
            D+S   + + L+    NHF G+L+ LVNNAGI      +D   + D+  IM+INF  + 
Sbjct: 65  CDLSSRSERQELMNTVANHFHGKLNILVNNAGIVIYKEAKDYT-VEDYSLIMSINFEAAY 123
Query: 163 YTTRFAVPHLRYT-KGKIVVLSSAASWLTAPRMSFYNASKAALVLFFETLRVELGSD-VG 220
           + +  A P L+ + +G +V +SS +  L  P  + Y A+K A+      L  E   D + 
Sbjct: 124 HLSVLAHPFLKASERGNVVFISSVSGALAVPYEAVYGATKGAMDQLTRCLAFEWAKDNIR 183
Query: 221 VTIVTPGFIESELTQ 235
           V  V PG I + L +
Sbjct: 184 VNGVGPGVIATSLVE 198

>pdb|3V2G|A Chain A, Crystal Structure Of A DehydrogenaseREDUCTASE FROM SINORHIZOBIUM Meliloti 1021 Length = 271

Iteration: 1
 Score = 70.9 bits (172), Expect = 6e-13,   Method: Compositional matrix adjust.
 Identities = 55/189 (29%), Positives = 82/189 (43%), Gaps = 2/189 (1%)
Query: 45  VSGKVVIITGASSGIGEHLAYEYXXXXXXXXXXXXXEKSLEEVADTAREIGSPDVITIRA 104
           ++GK   +TG S GIG  +A                     +   +  E      + IRA
Sbjct: 29  LAGKTAFVTGGSRGIGAAIAKRLALEGAAVALTYVNAAERAQAVVSEIEQAGGRAVAIRA 88
Query: 105 DVSKVDDCRSLVEETMNHFGRLDHLVNNAGISSVALFEDIVNITDFKQIMNINFWGSVYT 164
           D    +     + ET+   G LD LVN+AGI   A  E+   + DF ++  +NF      
Sbjct: 89  DNRDAEAIEQAIRETVEALGGLDILVNSAGIWHSAPLEE-TTVADFDEVXAVNFRAPFVA 147
Query: 165 TRFAVPHLRYTKGKIVVLSSAASWLTAPRMSFYNASKAALVLFFETLRVELGS-DVGVTI 223
            R A  HL      I + S+ A  +  P +S Y+ASKAAL    + L  +LG   + V I
Sbjct: 148 IRSASRHLGDGGRIITIGSNLAELVPWPGISLYSASKAALAGLTKGLARDLGPRGITVNI 207
Query: 224 VTPGFIESE 232
           V PG  +++
Sbjct: 208 VHPGSTDTD 216

>pdb|4IQG|C Chain C, Crystal Structure Of Bpro0239 Oxidoreductase From Polaromonas Sp. Js666 In Nadp Bound Form Length = 271

Iteration: 1
 Score = 70.9 bits (172), Expect = 7e-13,   Method: Compositional matrix adjust.
 Identities = 62/193 (32%), Positives = 90/193 (46%), Gaps = 8/193 (4%)
Query: 48  KVVIITGASSGIGEHLAY-EYXXXXXXXXXXXXXEKSLEEVADTAREIGSPDVITIRADV 106
           KVV+ITG S GIG   A                   + +EV    RE G    + ++ADV
Sbjct: 26  KVVLITGGSRGIGAASALLAARQGYAVAVNYASNSAAADEVVRQIREAGG-QALAVQADV 84
Query: 107 SKVDDCRSLVEETMNHFGRLDHLVNNAGISSVALFEDIVNITDFKQIMNINFWGSVYTTR 166
           +K  +  +  E      GRL  LVNNAG+       D + +   ++   IN +GS    R
Sbjct: 85  AKEREVLAXFETVDAQLGRLSALVNNAGVVDQTTRVDGITLERLQRXFEINVFGSFLCAR 144
Query: 167 FAVPHL--RY--TKGKIVVLSSAASWLTAPRMSF-YNASKAALVLFFETLRVELGSD-VG 220
            AV     RY  + G IV +SSAA+ L +P     Y A+K A+  F   L  E+ ++ + 
Sbjct: 145 EAVKRXSTRYGGSGGSIVNVSSAAARLGSPGQYVDYAAAKGAIDTFTLGLAKEVATEGIR 204
Query: 221 VTIVTPGFIESEL 233
           V  V PG IE+++
Sbjct: 205 VNAVRPGIIETDI 217

>pdb|3UF0|A Chain A, Crystal Structure Of A Putative Nad(P) Dependent Gluconate 5- Dehydrogenase From Beutenbergia Cavernae(Efi Target Efi-502044) With Bound Nadp (Low Occupancy) Length = 273

Iteration: 1
 Score = 70.5 bits (171), Expect = 8e-13,   Method: Compositional matrix adjust.
 Identities = 55/189 (29%), Positives = 97/189 (51%), Gaps = 10/189 (5%)
Query: 45  VSGKVVIITGASSGIGEHLAYEYXXXXXXXXXXXXXEKSLEEVADTAREIGSPDVITIRA 104
           ++G+  ++TGA SGIG  +A+ Y             +  ++EVAD   + G      + A
Sbjct: 29  LAGRTAVVTGAGSGIGRAIAHGYARAGAHVLAWGRTD-GVKEVADEIAD-GGGSAEAVVA 86
Query: 105 DVSKVDDCRSLVEETMNHFGRLDHLVNNAGISSVALFEDIVNITDFKQIMNINF---WGS 161
           D++ ++   ++ EE +    R+D LVNNAGI + A  E+ V++  +++++ +N    W  
Sbjct: 87  DLADLEGAANVAEE-LAATRRVDVLVNNAGIIARAPAEE-VSLGRWREVLTVNLDAAW-- 142
Query: 162 VYTTRFAVPHLRYTKGKIVVLSSAASWLTAPRMSFYNASKAALVLFFETLRVEL-GSDVG 220
           V +  F    L +  G+IV ++S  S+     ++ Y ASK A+V     L  E  G  VG
Sbjct: 143 VLSRSFGTAMLAHGSGRIVTIASMLSFQGGRNVAAYAASKHAVVGLTRALASEWAGRGVG 202
Query: 221 VTIVTPGFI 229
           V  + PG++
Sbjct: 203 VNALAPGYV 211

>pdb|3AI1|A Chain A, The Crystal Structure Of L-Sorbose Reductase From Gluconobacter Frateurii Complexed With Nadph And L-Sorbose Reveals The Structure Bases Of Its Catalytic Mechanism And High Substrate Selectivity Length = 263

Iteration: 1
 Score = 70.5 bits (171), Expect = 9e-13,   Method: Compositional matrix adjust.
 Identities = 59/190 (31%), Positives = 90/190 (47%), Gaps = 9/190 (4%)
Query: 45  VSGKVVIITGASSGIGEHLAYEYXXXXXXXXXXXXXEKSLEEVADTAREIGSPDVITIRA 104
           +SGKV +ITG+SSGIG  +A  +                L E A + +E     V+ +  
Sbjct: 5   ISGKVAVITGSSSGIGLAIAEGFAKEGAHIVLVARQVDRLHEAARSLKEKFGVRVLEVAV 64
Query: 105 DVSKVDDCRSLVEETMNHFGRLDHLVNNAGISSVALFEDIVNITDFKQ--IMNINFWGSV 162
           DV+  +   ++VE   + FG  D LVNNAG  S    E I+   D K      ++   +V
Sbjct: 65  DVATPEGVDAVVESVRSSFGGADILVNNAGTGS---NETIMEAADEKWQFYWELHVMAAV 121
Query: 163 YTTRFAVPHLRYTKGKIVVLSSAASWLTAPRM--SFYNASKAALVLFFETLRVELGSD-V 219
              R  VP +R  +G   ++ +A+     P      YN +KAAL++F +TL  E+  D +
Sbjct: 122 RLARGLVPGMR-ARGGGAIIHNASICAVQPLWYEPIYNVTKAALMMFSKTLATEVIKDNI 180
Query: 220 GVTIVTPGFI 229
            V  + PG I
Sbjct: 181 RVNCINPGLI 190

>pdb|3NDR|A Chain A, Crystal Structure Of Tetrameric Pyridoxal 4-Dehydrogenase From Mesorhizobium Loti Length = 247

Iteration: 1
 Score = 69.7 bits (169), Expect = 1e-12,   Method: Compositional matrix adjust.
 Identities = 53/198 (26%), Positives = 92/198 (46%), Gaps = 16/198 (8%)
Query: 42  SEDVSGKVVIITGASSGIGE----HLAYEYXXXXXXXXXXXXXEKSLEEVADTAREIGSP 97
           +E ++GK  ++TGA+ GIG+     LA +              + +   +   AR I   
Sbjct: 1   TERLAGKTALVTGAAQGIGKAIAARLAADGATVIVSDINAEGAKAAAASIGKKARAIA-- 58
Query: 98  DVITIRADVSKVDDCRSLVEETMNHFGRLDHLVNNAGISSVALFEDIVNITDFKQIMNIN 157
                 AD+S     ++L  E     G +D LVNNA I     ++D V++  +++I+++N
Sbjct: 59  ------ADISDPGSVKALFAEIQALTGGIDILVNNASIVPFVAWDD-VDLDHWRKIIDVN 111
Query: 158 FWGSVYTTRFAVPHLRYT--KGKIVVLSSAASWLTAPRMSFYNASKAALVLFFETLRVEL 215
             G+   TR      R     G+++ ++S   +   P  + Y A+K  ++ F   L  EL
Sbjct: 112 LTGTFIVTRAGTDQXRAAGKAGRVISIASNTFFAGTPNXAAYVAAKGGVIGFTRALATEL 171
Query: 216 GS-DVGVTIVTPGFIESE 232
           G  ++    VTPG IES+
Sbjct: 172 GKYNITANAVTPGLIESD 189

>pdb|1XHL|A Chain A, Crystal Structure Of Putative Tropinone Reductase-Ii From Caenorhabditis Elegans With Cofactor And Substrate Length = 297

Iteration: 1
 Score = 69.7 bits (169), Expect = 1e-12,   Method: Compositional matrix adjust.
 Identities = 60/195 (30%), Positives = 90/195 (46%), Gaps = 13/195 (6%)
Query: 46  SGKVVIITGASSGIGEHLAYEYXXXXXXXXXXXXXEKSLEEVADTAREIGSP--DVITIR 103
           SGK VIITG+S+GIG   A  +             E  LEE      + G P   +  + 
Sbjct: 25  SGKSVIITGSSNGIGRSAAVIFAKEGAQVTITGRNEDRLEETKQQILKAGVPAEKINAVV 84
Query: 104 ADVSKVDDCRSLVEETMNHFGRLDHLVNNAGISSVALFEDIVNITD-----FKQIMNINF 158
           ADV++      ++  T+  FG++D LVNNAG    A   D    TD     +++   +NF
Sbjct: 85  ADVTEASGQDDIINTTLAKFGKIDILVNNAG----ANLADGTANTDQPVELYQKTFKLNF 140
Query: 159 WGSVYTTRFAVPHLRYTKGKIVVLSSAASWLTA-PRMSFYNASKAALVLFFETLRVEL-G 216
              +  T+    HL  TKG+IV +SS  +   A     +Y  +KAAL  +     ++L  
Sbjct: 141 QAVIEMTQKTKEHLIKTKGEIVNVSSIVAGPQAHSGYPYYACAKAALDQYTRCTAIDLIQ 200
Query: 217 SDVGVTIVTPGFIES 231
             V V  V+PG + +
Sbjct: 201 HGVRVNSVSPGAVAT 215

>pdb|3AI3|A Chain A, The Crystal Structure Of L-Sorbose Reductase From Gluconobacter Frateurii Complexed With Nadph And L-Sorbose Length = 263

Iteration: 1
 Score = 69.7 bits (169), Expect = 1e-12,   Method: Compositional matrix adjust.
 Identities = 60/193 (31%), Positives = 90/193 (46%), Gaps = 15/193 (7%)
Query: 45  VSGKVVIITGASSGIGEHLAYEYXXXXXXXXXXXXXEKSLEEVADTAREIGSPDVITIRA 104
           +SGKV +ITG+SSGIG  +A  +                L E A + +E     V+ +  
Sbjct: 5   ISGKVAVITGSSSGIGLAIAEGFAKEGAHIVLVARQVDRLHEAARSLKEKFGVRVLEVAV 64
Query: 105 DVSKVDDCRSLVEETMNHFGRLDHLVNNAGISSVALFEDIVNITDFKQIMNINFW----- 159
           DV+  +   ++VE   + FG  D LVNNAG  S    E I+   D K      +W     
Sbjct: 65  DVATPEGVDAVVESVRSSFGGADILVNNAGTGS---NETIMEAADEKWQF---YWELLVM 118
Query: 160 GSVYTTRFAVPHLRYTKGKIVVLSSAASWLTAPRM--SFYNASKAALVLFFETLRVELGS 217
            +V   R  VP +R  +G   ++ +A+     P      YN +KAAL++F +TL  E+  
Sbjct: 119 AAVRLARGLVPGMR-ARGGGAIIHNASICAVQPLWYEPIYNVTKAALMMFSKTLATEVIK 177
Query: 218 D-VGVTIVTPGFI 229
           D + V  + PG I
Sbjct: 178 DNIRVNCINPGLI 190

>pdb|2BGK|A Chain A, X-Ray Structure Of Apo-Secoisolariciresinol Dehydrogenase Length = 278

Iteration: 1
 Score = 69.3 bits (168), Expect = 2e-12,   Method: Compositional matrix adjust.
 Identities = 50/148 (33%), Positives = 80/148 (54%), Gaps = 11/148 (7%)
Query: 94  IGSPDVIT-IRADVSKVDDCRSLVEETMNHFGRLDHLVNNAGISSVALFEDI-VNITDFK 151
           IGSPDVI+ +  DV+K +D R+LV+ T+   G+LD +  N G+ S   +  +     DFK
Sbjct: 60  IGSPDVISFVHCDVTKDEDVRNLVDTTIAKHGKLDIMFGNVGVLSTTPYSILEAGNEDFK 119
Query: 152 QIMNINFWGSV----YTTRFAVPHLRYTKGKIVVLSSAASWLTAPRMSF-YNASKAALVL 206
           ++M+IN +G+     +  R  +P     KG IV  +S +S+     +S  Y A+K A++ 
Sbjct: 120 RVMDINVYGAFLVAKHAARVMIP---AKKGSIVFTASISSFTAGEGVSHVYTATKHAVLG 176
Query: 207 FFETLRVELGS-DVGVTIVTPGFIESEL 233
              +L  ELG   + V  V+P  + S L
Sbjct: 177 LTTSLCTELGEYGIRVNCVSPYIVASPL 204

>pdb|3OEC|A Chain A, Crystal Structure Of Carveol Dehydrogenase From Mycobacterium Thermoresistibile Length = 317

Iteration: 1
 Score = 68.9 bits (167), Expect = 2e-12,   Method: Compositional matrix adjust.
 Identities = 58/206 (28%), Positives = 95/206 (46%), Gaps = 19/206 (9%)
Query: 45  VSGKVVIITGASSGIGEHLAYEYXXXXX---------XXXXXXXXEKSLEEVADTAR--E 93
           + GKV  ITGA+ G G   A                         + S EE+ +T R  E
Sbjct: 44  LQGKVAFITGAARGQGRTHAVRLAQDGADIVAIDLCRQQPNLDYAQGSPEELKETVRLVE 103
Query: 94  IGSPDVITIRADVSKVDDCRSLVEETMNHFGRLDHLVNNAGISSVALFEDIVNITD--FK 151
                +I  +ADV  +   +++V+E +  FG +D LV+N GIS+     ++V++TD  + 
Sbjct: 104 EQGRRIIARQADVRDLASLQAVVDEALAEFGHIDILVSNVGISNQG---EVVSLTDQQWS 160
Query: 152 QIMNINFWGSVYTTRFAVPHL--RYTKGKIVVLSSAASWLTAPRMSFYNASKAALVLFFE 209
            I+  N  G+ +  R  +P +  R   G ++ +SS      AP  S Y ASK  +     
Sbjct: 161 DILQTNLIGAWHACRAVLPSMIERGQGGSVIFVSSTVGLRGAPGQSHYAASKHGVQGLML 220
Query: 210 TLRVELGS-DVGVTIVTPGFIESELT 234
           +L  E+G  ++ V  V PG + +E+ 
Sbjct: 221 SLANEVGRHNIRVNSVNPGAVNTEMA 246

>pdb|2PH3|A Chain A, Crystal Structure Of 3-oxoacyl-[acyl Carrier Protein] Reductase Ttha0415 From Thermus Thermophilus Length = 245

Iteration: 1
 Score = 68.9 bits (167), Expect = 2e-12,   Method: Compositional matrix adjust.
 Identities = 64/189 (33%), Positives = 96/189 (50%), Gaps = 6/189 (3%)
Query: 51  IITGASSGIGEHLAYEYXXXX-XXXXXXXXXEKSLEEVADTAREIGSPDVITIRADVSKV 109
           +ITGAS GIG  +A                  +  EEVA+ AR  GSP V  + A++ + 
Sbjct: 5   LITGASRGIGRAIALRLAEDGFALAIHYGQNREKAEEVAEEARRRGSPLVAVLGANLLEA 64
Query: 110 DDCRSLVEETMNHFGRLDHLVNNAGISSVALFEDIVNITDFKQIMNINFWGSVYTTRFAV 169
           +   +LV +     G LD LVNNAGI+   L   + +  D++ ++  N      TTR AV
Sbjct: 65  EAATALVHQAAEVLGGLDTLVNNAGITRDTLLVRMKD-EDWEAVLEANLSAVFRTTREAV 123
Query: 170 PHLRYTK-GKIVVLSSAASWLTAPRMSFYNASKAALVLFFETLRVELGSDVGVTI--VTP 226
             +   + G+IV ++S    L  P  + Y ASKA L+ F   +  E  +  G+T+  V P
Sbjct: 124 KLMMKARFGRIVNITSVVGILGNPGQANYVASKAGLIGFTRAVAKEY-AQRGITVNAVAP 182
Query: 227 GFIESELTQ 235
           GFIE+E+T+
Sbjct: 183 GFIETEMTE 191

>pdb|1BDB|A Chain A, Cis-Biphenyl-2,3-Dihydrodiol-2,3-Dehydrogenase From Pseudomonas Sp. Lb400 Length = 277

Iteration: 1
 Score = 68.9 bits (167), Expect = 3e-12,   Method: Compositional matrix adjust.
 Identities = 54/194 (27%), Positives = 92/194 (47%), Gaps = 10/194 (5%)
Query: 45  VSGKVVIITGASSGIGEHLAYEYXXXXXXXXXXXXXEKSLEEVADTAREIGSPDVITIRA 104
           + G+ V+ITG +SG+G  L   +             +KS E +A+   + G  +V+ I  
Sbjct: 3   LKGEAVLITGGASGLGRALVDRFVAEGAKVAVL---DKSAERLAELETDHGD-NVLGIVG 58
Query: 105 DVSKVDDCRSLVEETMNHFGRLDHLVNNAGI-----SSVALFEDIVNITDFKQIMNINFW 159
           DV  ++D +      +  FG++D L+ NAGI     + V L E+ ++   F ++ +IN  
Sbjct: 59  DVRSLEDQKQAASRCVARFGKIDTLIPNAGIWDYSTALVDLPEESLDAA-FDEVFHINVK 117
Query: 160 GSVYTTRFAVPHLRYTKGKIVVLSSAASWLTAPRMSFYNASKAALVLFFETLRVELGSDV 219
           G ++  +  +P L  ++G ++   S A +        Y A+K A+V     L  EL   V
Sbjct: 118 GYIHAVKACLPALVASRGNVIFTISNAGFYPNGGGPLYTAAKHAIVGLVRELAFELAPYV 177
Query: 220 GVTIVTPGFIESEL 233
            V  V  G I S+L
Sbjct: 178 RVNGVGSGGINSDL 191

>pdb|3UN1|A Chain A, Crystal Structure Of An Oxidoreductase From Sinorhizobium Meliloti 1021 Length = 260

Iteration: 1
 Score = 68.6 bits (166), Expect = 3e-12,   Method: Compositional matrix adjust.
 Identities = 59/190 (31%), Positives = 88/190 (46%), Gaps = 19/190 (10%)
Query: 48  KVVIITGASSGIGEHLAYEYXXXXXXXXXXXXXEKSLEEVADTAREIGSPDVITIRADVS 107
           KVV+ITGAS GIG  L   Y              +S++  AD       PD+ T+  D+S
Sbjct: 29  KVVVITGASQGIGAGLVRAYRDRNYRVVAT---SRSIKPSAD-------PDIHTVAGDIS 78
Query: 108 KVDDCRSLVEETMNHFGRLDHLVNNAGISSVALFEDIVNITDFKQIMNINFWGSVY-TTR 166
           K +    +V E +  FGR+D LVNNAG+     F +     D+   + +N  G  + T R
Sbjct: 79  KPETADRIVREGIERFGRIDSLVNNAGVFLAKPFVEXTQ-EDYDHNLGVNVAGFFHITQR 137
Query: 167 FAVPHLRYTKGKIVVLSSAASWLTAPRMSFYNA----SKAALVLFFETLRVELG-SDVGV 221
            A   L+   G IV +++  S +  P +   +A    +K  L     +L  E   S V V
Sbjct: 138 AAAEXLKQGSGHIVSITT--SLVDQPXVGXPSALASLTKGGLNAVTRSLAXEFSRSGVRV 195
Query: 222 TIVTPGFIES 231
             V+PG I++
Sbjct: 196 NAVSPGVIKT 205

>pdb|3V8B|A Chain A, Crystal Structure Of A 3-Ketoacyl-Acp Reductase From Sinorhizobium Meliloti 1021 Length = 283

Iteration: 1
 Score = 68.6 bits (166), Expect = 3e-12,   Method: Compositional matrix adjust.
 Identities = 64/191 (33%), Positives = 90/191 (47%), Gaps = 5/191 (2%)
Query: 48  KVVIITGASSGIGEHLAYEYXXXXXXXXXXXXXEKSLEEVADTAREIGSPDVITIRADVS 107
            V +ITGA SGIG   A                   +EEVAD     G    I + ADVS
Sbjct: 29  PVALITGAGSGIGRATALALAADGVTVGALGRTRTEVEEVADEIVGAGG-QAIALEADVS 87
Query: 108 KVDDCRSLVEETMNHFGRLDHLVNNAGISSVALFEDIVNITDFKQIMNINFWGSVYTTRF 167
                R+ V + +  FG LD +V NAGI+ V    D +   ++ + + +N  G+  T   
Sbjct: 88  DELQXRNAVRDLVLKFGHLDIVVANAGINGVWAPIDDLKPFEWDETIAVNLRGTFLTLHL 147
Query: 168 AVPHLRY-TKGKIVVLSS--AASWLTAPRMSFYNASKAALVLFFETLRVELGS-DVGVTI 223
            VP+L+    G IVV+SS       T P  + Y A+KAA V   + L +ELG   + V  
Sbjct: 148 TVPYLKQRGGGAIVVVSSINGTRTFTTPGATAYTATKAAQVAIVQQLALELGKHHIRVNA 207
Query: 224 VTPGFIESELT 234
           V PG IE+ ++
Sbjct: 208 VCPGAIETNIS 218

>pdb|2Y93|A Chain A, Crystal Structure Of Cis-Biphenyl-2,3-Dihydrodiol-2,3- Dehydrogenase (Bphb)from Pandoraea Pnomenusa Strain B-356. Length = 281

Iteration: 1
 Score = 68.6 bits (166), Expect = 3e-12,   Method: Compositional matrix adjust.
 Identities = 53/196 (27%), Positives = 90/196 (45%), Gaps = 14/196 (7%)
Query: 45  VSGKVVIITGASSGIGEHLAYEYXXXXXXXXXXXXXEKSLEE--VADTAREIGSPDVITI 102
           ++G+V +ITG +SG+G  L   +              + L E  VA     +G      +
Sbjct: 3   LTGEVALITGGASGLGRALVDRFVAEGARVAVLDKSAERLRELEVAHGGNAVG------V 56
Query: 103 RADVSKVDDCRSLVEETMNHFGRLDHLVNNAGI----SSVA-LFEDIVNITDFKQIMNIN 157
             DV  + D +   E  +  FG++D L+ NAGI    +++A L ED ++   F  I ++N
Sbjct: 57  VGDVRSLQDQKRAAERCLAAFGKIDTLIPNAGIWDYSTALADLPEDKIDAA-FDDIFHVN 115
Query: 158 FWGSVYTTRFAVPHLRYTKGKIVVLSSAASWLTAPRMSFYNASKAALVLFFETLRVELGS 217
             G ++  +  +P L  ++G +V   S A +        Y A+K A+V     +  EL  
Sbjct: 116 VKGYIHAVKACLPALVSSRGSVVFTISNAGFYPNGGGPLYTATKHAVVGLVRQMAFELAP 175
Query: 218 DVGVTIVTPGFIESEL 233
            V V  V PG + ++L
Sbjct: 176 HVRVNGVAPGGMNTDL 191

>pdb|2ZAT|A Chain A, Crystal Structure Of A Mammalian Reductase Length = 260

Iteration: 1
 Score = 68.2 bits (165), Expect = 4e-12,   Method: Compositional matrix adjust.
 Identities = 50/192 (26%), Positives = 96/192 (50%), Gaps = 7/192 (3%)
Query: 48  KVVIITGASSGIGEHLAYEYXXXXXXXXXXXXXEKSLEEVADTAREIGSPDVITIRADVS 107
           KV ++T ++ GIG  +A                +++++    T +  G     T+   V 
Sbjct: 15  KVALVTASTDGIGLAIARRLAQDGAHVVVSSRKQENVDRTVATLQGEGLSVTGTV-CHVG 73
Query: 108 KVDDCRSLVEETMNHFGRLDHLVNNAGISSVALFEDIVNITD--FKQIMNINFWGSVYTT 165
           K +D   LV   +N  G +D LV+NA ++    F +I++ T+  + +I+++N   +V  T
Sbjct: 74  KAEDRERLVAMAVNLHGGVDILVSNAAVNP--FFGNIIDATEEVWDKILHVNVKATVLMT 131
Query: 166 RFAVPHL-RYTKGKIVVLSSAASWLTAPRMSFYNASKAALVLFFETLRVELGS-DVGVTI 223
           +  VP + +   G ++++SS  ++   P +  YN SK AL+   + L VEL   ++ V  
Sbjct: 132 KAVVPEMEKRGGGSVLIVSSVGAYHPFPNLGPYNVSKTALLGLTKNLAVELAPRNIRVNC 191
Query: 224 VTPGFIESELTQ 235
           + PG I++  +Q
Sbjct: 192 LAPGLIKTNFSQ 203

>pdb|2C07|A Chain A, Oxoacyl-Acp Reductase Of Plasmodium Falciparum Length = 285

Iteration: 1
 Score = 68.2 bits (165), Expect = 4e-12,   Method: Compositional matrix adjust.
 Identities = 54/191 (28%), Positives = 91/191 (47%), Gaps = 8/191 (4%)
Query: 48  KVVIITGASSGIGEHLAYEYXXXXXXXXXXXXXEKSLEEVADTAREIGSPDVITIRADVS 107
           KV ++TGA  GIG  +A                +KS + V D  +  G         DVS
Sbjct: 45  KVALVTGAGRGIGREIAKMLAKSVSHVICISRTQKSCDSVVDEIKSFGYESS-GYAGDVS 103
Query: 108 KVDDCRSLVEETMNHFGRLDHLVNNAGISSVALFEDIVNITDFKQIMNINFWGSVYTTRF 167
           K ++   ++ + +     +D LVNNAGI+   LF  + N  +++ ++  N     Y T+ 
Sbjct: 104 KKEEISEVINKILTEHKNVDILVNNAGITRDNLFLRMKN-DEWEDVLRTNLNSLFYITQP 162
Query: 168 AVPHL---RYTKGKIVVLSSAASWLTAPRMSFYNASKAALVLFFETLRVELGS-DVGVTI 223
               +   RY  G+I+ +SS          + Y++SKA ++ F ++L  EL S ++ V  
Sbjct: 163 ISKRMINNRY--GRIINISSIVGLTGNVGQANYSSSKAGVIGFTKSLAKELASRNITVNA 220
Query: 224 VTPGFIESELT 234
           + PGFI S++T
Sbjct: 221 IAPGFISSDMT 231

>pdb|2NM0|A Chain A, Crystal Structure Of Sco1815: A Beta-Ketoacyl-Acyl Carrier Protein Reductase From Streptomyces Coelicolor A3(2) Length = 253

Iteration: 1
 Score = 68.2 bits (165), Expect = 4e-12,   Method: Compositional matrix adjust.
 Identities = 51/191 (26%), Positives = 94/191 (49%), Gaps = 17/191 (8%)
Query: 48  KVVIITGASSGIGEHLAYEYXXXXXXXXXXXXXEKSLEEVADTAREIGSPD-VITIRADV 106
           + V++TG + GIG  +A  +               + ++VA T R    P+  + ++ D+
Sbjct: 22  RSVLVTGGNRGIGLAIARAFA-------------DAGDKVAITYRSGEPPEGFLAVKCDI 68
Query: 107 SKVDDCRSLVEETMNHFGRLDHLVNNAGISSVALFEDIVNITDFKQIMNINFWGSVYTTR 166
           +  +      +E     G ++ L+ NAG++   L   +    DF  ++  N  G+    +
Sbjct: 69  TDTEQVEQAYKEIEETHGPVEVLIANAGVTKDQLLMRMSE-EDFTSVVETNLTGTFRVVK 127
Query: 167 FA-VPHLRYTKGKIVVLSSAASWLTAPRMSFYNASKAALVLFFETLRVELGS-DVGVTIV 224
            A    LR  KG++V++SS    L +   + Y ASKA LV F  +L  ELGS ++   +V
Sbjct: 128 RANRAMLRAKKGRVVLISSVVGLLGSAGQANYAASKAGLVGFARSLARELGSRNITFNVV 187
Query: 225 TPGFIESELTQ 235
            PGF+++++T+
Sbjct: 188 APGFVDTDMTK 198

>pdb|3PK0|A Chain A, Crystal Structure Of Short-Chain DehydrogenaseREDUCTASE SDR FROM Mycobacterium Smegmatis Length = 262

Iteration: 1
 Score = 67.8 bits (164), Expect = 5e-12,   Method: Compositional matrix adjust.
 Identities = 53/196 (27%), Positives = 88/196 (44%), Gaps = 12/196 (6%)
Query: 44  DVSGKVVIITGASSGIGEHLAYEYXXXXXXXXXXXXXEKSLEEVADTAREIGSPDVITIR 103
           D+ G+ V++TG + GIG  +A  +                ++       ++GS  VI ++
Sbjct: 7   DLQGRSVVVTGGTKGIGRGIATVFARAGANVAVAGRSTADIDACVADLDQLGSGKVIGVQ 66
Query: 104 ADVSKVDDCRSLVEETMNHFGRLDHLVNNAGISSVALFEDIVNITDFKQIMN----INFW 159
            DVS    C +L    +  FG +D +  NAG+     F D    T   + +N    +N  
Sbjct: 67  TDVSDRAQCDALAGRAVEEFGGIDVVCANAGV-----FPDAPLATMTPEQLNGIFAVNVN 121
Query: 160 GSVYTTRFAVPHLRYT-KGKIVVLSSAASWLTA-PRMSFYNASKAALVLFFETLRVELGS 217
           G+ Y  +  +  L  +  G++V+ SS    +T  P  S Y A+KAA + F  T  +EL  
Sbjct: 122 GTFYAVQACLDALIASGSGRVVLTSSITGPITGYPGWSHYGATKAAQLGFMRTAAIELAP 181
Query: 218 -DVGVTIVTPGFIESE 232
             + V  + PG I +E
Sbjct: 182 HKITVNAIMPGNIMTE 197

>pdb|3O4R|A Chain A, Crystal Structure Of Human DehydrogenaseREDUCTASE (SDR FAMILY) MEMBER 4 (Dhrs4) Length = 261

Iteration: 1
 Score = 67.8 bits (164), Expect = 6e-12,   Method: Compositional matrix adjust.
 Identities = 51/208 (24%), Positives = 104/208 (50%), Gaps = 7/208 (3%)
Query: 43  EDVSGKVVIITGASSGIGEHLAYEYXXXXXXXXXXXXXEKSLEEVADTAREIGSPDVITI 102
           + ++ KV ++T ++ GIG  +A                ++++++   T +  G     T+
Sbjct: 11  DPLANKVALVTASTDGIGFAIARRLAQDGAHVVVSSRKQQNVDQAVATLQGEGLSVTGTV 70
Query: 103 RADVSKVDDCRSLVEETMNHFGRLDHLVNNAGISSVALFEDIVNITD--FKQIMNINFWG 160
              V K +D   LV   +   G +D LV+NA ++    F  I+++T+  + + ++IN   
Sbjct: 71  -CHVGKAEDRERLVATAVKLHGGIDILVSNAAVNP--FFGSIMDVTEEVWDKTLDINVKA 127
Query: 161 SVYTTRFAVPHL-RYTKGKIVVLSSAASWLTAPRMSFYNASKAALVLFFETLRVELGS-D 218
               T+  VP + +   G +V++SS A++  +P  S YN SK AL+   +TL +EL   +
Sbjct: 128 PALMTKAVVPEMEKRGGGSVVIVSSIAAFSPSPGFSPYNVSKTALLGLTKTLAIELAPRN 187
Query: 219 VGVTIVTPGFIESELTQGKFLTGRRQNS 246
           + V  + PG I++  ++  ++   ++ S
Sbjct: 188 IRVNCLAPGLIKTSFSRMLWMDKEKEES 215

>pdb|4B79|A Chain A, The Aeropath Project And Pseudomonas Aeruginosa High-throughput Crystallographic Studies For Assessment Of Potential Targets In Early Stage Drug Discovery. Length = 242

Iteration: 1
 Score = 67.4 bits (163), Expect = 7e-12,   Method: Compositional matrix adjust.
 Identities = 56/201 (27%), Positives = 97/201 (48%), Gaps = 20/201 (9%)
Query: 40  IFSEDV-SGKVVIITGASSGIGEHLAYEYXXXXXXXXXXXXXEKSLEEVADT--AREIGS 96
           +F  D+ +G+ V++TG SSGIG  +A ++             E   E VA    A  + +
Sbjct: 3   VFQHDIYAGQQVLVTGGSSGIGAAIAMQF------------AELGAEVVALGLDADGVHA 50
Query: 97  PDVITIRADVSKVDDCRSLVEETMNHFGRLDHLVNNAGISSVALFEDIVNITDFKQIMNI 156
           P    IR +   + D + L +       RLD LVNNAGIS      +  ++  F++++ +
Sbjct: 51  PRHPRIRREELDITDSQRL-QRLFEALPRLDVLVNNAGISR---DREEYDLATFERVLRL 106
Query: 157 NFWGSVYTTRFAVPHLRYTKGKIVVLSSAASWLTAPRMSFYNASKAALVLFFETLRVELG 216
           N   ++  ++ A P L    G I+ ++S  S   +     Y+ASK A+V    +L  E  
Sbjct: 107 NLSAAMLASQLARPLLAQRGGSILNIASMYSTFGSADRPAYSASKGAIVQLTRSLACEYA 166
Query: 217 SD-VGVTIVTPGFIESELTQG 236
           ++ + V  + PG+I++ L  G
Sbjct: 167 AERIRVNAIAPGWIDTPLGAG 187

>pdb|1I01|A Chain A, Crystal Structure Of Beta-Ketoacyl [acyl Carrier Protein] Reductase From E. Coli. Length = 244

Iteration: 1
 Score = 66.6 bits (161), Expect = 1e-11,   Method: Compositional matrix adjust.
 Identities = 53/192 (27%), Positives = 93/192 (48%), Gaps = 9/192 (4%)
Query: 47  GKVVIITGASSGIGEHLAYEYXXXXXXXXXXXXXEKSLEEVADTAREIGSPDVITIRADV 106
           GK+ ++TGAS GIG  +A                E   + ++D     G   ++    +V
Sbjct: 5   GKIALVTGASRGIGRAIAETLAARGAKVIGTATSENGAQAISDYLGANGKGLML----NV 60
Query: 107 SKVDDCRSLVEETMNHFGRLDHLVNNAGISSVALFEDIVNITDFKQIMNINFWGSVYTTR 166
           +      S++E+    FG +D LVNNAGI+   L   + +  ++  I+  N   SV+   
Sbjct: 61  TDPASIESVLEKIRAEFGEVDILVNNAGITRDNLLMRMKD-EEWNDIIETNLS-SVFRLS 118
Query: 167 FAV--PHLRYTKGKIVVLSSAASWLTAPRMSFYNASKAALVLFFETLRVELGS-DVGVTI 223
            AV    ++   G+I+ + S    +     + Y A+KA L+ F ++L  E+ S  + V +
Sbjct: 119 KAVMRAMMKKRHGRIITIGSVVGTMGNGGQANYAAAKAGLIGFSKSLAREVASRGITVNV 178
Query: 224 VTPGFIESELTQ 235
           V PGFIE+++T+
Sbjct: 179 VAPGFIETDMTR 190

>pdb|3V1T|C Chain C, Crystal Structure Of A Putative Ketoacyl Reductase (Fabg4) From Mycobacterium Tuberculosis H37rv At 1.9 Angstrom Resolution Length = 462

Iteration: 1
 Score = 66.2 bits (160), Expect = 1e-11,   Method: Compositional matrix adjust.
 Identities = 68/225 (30%), Positives = 104/225 (46%), Gaps = 36/225 (16%)
Query: 41  FSEDVSGKVVIITGASSGIGEHLAYEYXXXXXXXXXXXXXEKSLEEVADTAREIGSPDVI 100
           + + + GKV I+TGA+ GIG  +A E              E + E +A+TA ++G     
Sbjct: 215 WEKPLDGKVAIVTGAARGIGATIA-EVFARDGAHVVAIDVESAAENLAETASKVGG---T 270
Query: 101 TIRADVSKVDDCRSLVEETM--NHFGRLDHLVNNAGISSVALFEDIVNITDFKQIMNINF 158
            +  DV+  DD    + E +  +H G+ D LVNNAGI+   L   + N+ D +       
Sbjct: 271 ALWLDVT-ADDAVDKISEHLRDHHGGKADILVNNAGITRDKL---LANMDDAR------- 319
Query: 159 WGSVYTTRFAVPHLRYTK-----------GKIVVLSSAASWLTAPRMSFYNASKAALVLF 207
           W +V       P LR T+           G+++ LSS A        + Y  +KA ++  
Sbjct: 320 WDAVLAVNLLAP-LRLTEGLVGNGSIGEGGRVIGLSSIAGIAGNRGQTNYATTKAGMIGI 378
Query: 208 FETLRVELGSDVGVTI--VTPGFIESELTQGKFLT----GRRQNS 246
            + L   L +  G+TI  V PGFIE+++T    L     GRR NS
Sbjct: 379 TQALAPGLAAK-GITINAVAPGFIETQMTAAIPLATREVGRRLNS 422

>pdb|3UVE|A Chain A, Crystal Structure Of Carveol Dehydrogenase ((+)-Trans-Carveol Dehydrogenase) From Mycobacterium Avium Length = 286

Iteration: 1
 Score = 66.2 bits (160), Expect = 1e-11,   Method: Compositional matrix adjust.
 Identities = 57/214 (26%), Positives = 91/214 (42%), Gaps = 20/214 (9%)
Query: 45  VSGKVVIITGASSGIGEHLAYEYXXXXXXXXXXXXXEKSLEEVADTAREIGSPD------ 98
           V GKV  +TGA+ G G   A                +     V DTA    +P+      
Sbjct: 9   VEGKVAFVTGAARGQGRSHAVRLAQEGADIIAVDICKPIRAGVVDTAIPASTPEDLAETA 68
Query: 99  ---------VITIRADVSKVDDCRSLVEETMNHFGRLDHLVNNAGISSVALFEDIVNITD 149
                    ++T   DV   D  ++ V+  +   GRLD +V NAGI +     D  +  D
Sbjct: 69  DLVKGHNRRIVTAEVDVRDYDALKAAVDSGVEQLGRLDIIVANAGIGNGGDTLDKTSEED 128
Query: 150 FKQIMNINFWGSVYTTRFAVPHL-RYTKGKIVVLSSAASWLTA-PRMSFYNASKAALVLF 207
           + ++++IN  G   T +  VPH+    +G  ++L+S+   L A P    Y A+K  +V  
Sbjct: 129 WTEMIDINLAGVWKTVKAGVPHMIAGGRGGSIILTSSVGGLKAYPHTGHYVAAKHGVVGL 188
Query: 208 FETLRVELGSD-VGVTIVTPGFIESEL--TQGKF 238
                VELG   + V  V P  +++ +   +G F
Sbjct: 189 MRAFGVELGQHMIRVNSVHPTHVKTPMLHNEGTF 222

>pdb|4DQX|A Chain A, Crystal Structure Of A Short Chain Dehydrogenase From Rhizobium Etli Cfn 42 Length = 277

Iteration: 1
 Score = 66.2 bits (160), Expect = 1e-11,   Method: Compositional matrix adjust.
 Identities = 59/195 (30%), Positives = 91/195 (46%), Gaps = 13/195 (6%)
Query: 42  SEDVSGKVVIITGASSGIGEHLAYEYXXXXXXXXXXXXXEKSLEEVADTAREIGSPDVIT 101
           S D++ +V I+TG  SGIG   A  +             E +   VA+   EIGS     
Sbjct: 22  SXDLNQRVCIVTGGGSGIGRATAELFAKNGAYVVVADVNEDAAVRVAN---EIGSK-AFG 77
Query: 102 IRADVSKVDDCRSLVEETMNHFGRLDHLVNNAGISSVALFEDIVNITD--FKQIMNINFW 159
           +R DVS   D  S VE+T   +GR+D LVNNAG  +     ++V I +  + +I ++N  
Sbjct: 78  VRVDVSSAKDAESXVEKTTAKWGRVDVLVNNAGFGTTG---NVVTIPEETWDRIXSVNVK 134
Query: 160 GSVYTTRFAVPHLRYTKGKIVV--LSSAASWLTAPRMSFYNASKAALVLFFETLRVELGS 217
           G    +++ +P  R   G  ++   S  A+   A R + Y ASK A+         +   
Sbjct: 135 GIFLCSKYVIPVXRRNGGGSIINTTSYTATSAIADRTA-YVASKGAISSLTRAXAXDHAK 193
Query: 218 D-VGVTIVTPGFIES 231
           + + V  V PG I+S
Sbjct: 194 EGIRVNAVAPGTIDS 208

>pdb|3LLS|A Chain A, Crystal Structure Of 3-Ketoacyl-(Acyl-Carrier-Protein) Reductase From Mycobacterium Tuberculosis Length = 475

Iteration: 1
 Score = 66.2 bits (160), Expect = 2e-11,   Method: Compositional matrix adjust.
 Identities = 68/225 (30%), Positives = 104/225 (46%), Gaps = 36/225 (16%)
Query: 41  FSEDVSGKVVIITGASSGIGEHLAYEYXXXXXXXXXXXXXEKSLEEVADTAREIGSPDVI 100
           + + + GKV I+TGA+ GIG  +A E              E + E +A+TA ++G     
Sbjct: 228 WEKPLDGKVAIVTGAARGIGATIA-EVFARDGAHVVAIDVESAAENLAETASKVGG---T 283
Query: 101 TIRADVSKVDDCRSLVEETM--NHFGRLDHLVNNAGISSVALFEDIVNITDFKQIMNINF 158
            +  DV+  DD    + E +  +H G+ D LVNNAGI+   L   + N+ D +       
Sbjct: 284 ALWLDVT-ADDAVDKISEHLRDHHGGKADILVNNAGITRDKL---LANMDDAR------- 332
Query: 159 WGSVYTTRFAVPHLRYTK-----------GKIVVLSSAASWLTAPRMSFYNASKAALVLF 207
           W +V       P LR T+           G+++ LSS A        + Y  +KA ++  
Sbjct: 333 WDAVLAVNLLAP-LRLTEGLVGNGSIGEGGRVIGLSSIAGIAGNRGQTNYATTKAGMIGI 391
Query: 208 FETLRVELGSDVGVTI--VTPGFIESELTQGKFLT----GRRQNS 246
            + L   L +  G+TI  V PGFIE+++T    L     GRR NS
Sbjct: 392 TQALAPGLAAK-GITINAVAPGFIETQMTAAIPLATREVGRRLNS 435

>pdb|3GVC|A Chain A, Crystal Structure Of Probable Short-Chain Dehydrogenase- Reductase From Mycobacterium Tuberculosis Length = 277

Iteration: 1
 Score = 66.2 bits (160), Expect = 2e-11,   Method: Compositional matrix adjust.
 Identities = 56/200 (28%), Positives = 88/200 (44%), Gaps = 7/200 (3%)
Query: 38  NSIFSEDVSGKVVIITGASSGIGEHLAYEYXXXXXXXXXXXXXEKSLEEVADTAREIGSP 97
            S+   D++GKV I+TGA +GIG  +A                  + +     A +IG  
Sbjct: 20  GSMNHPDLAGKVAIVTGAGAGIGLAVARRLADEGCHVLCADIDGDAADA---AATKIGC- 75
Query: 98  DVITIRADVSKVDDCRSLVEETMNHFGRLDHLVNNAGISSVALFEDIVNITDFKQIMNIN 157
                R DVS      ++V+  +  FG +D LV NAG+  +A   D   + DF +++ IN
Sbjct: 76  GAAACRVDVSDEQQIIAMVDACVAAFGGVDKLVANAGVVHLASLID-TTVEDFDRVIAIN 134
Query: 158 FWGSVYTTRFAVPHL-RYTKGKIVVLSSAASWLTAPRMSFYNASKAALVLFFETLRVEL- 215
             G+   T+ A P +     G IV LSS A  +       Y  SKA ++        EL 
Sbjct: 135 LRGAWLCTKHAAPRMIERGGGAIVNLSSLAGQVAVGGTGAYGMSKAGIIQLSRITAAELR 194
Query: 216 GSDVGVTIVTPGFIESELTQ 235
            S +    + P F+++ + Q
Sbjct: 195 SSGIRSNTLLPAFVDTPMQQ 214

>pdb|4FW8|A Chain A, Crystal Structure Of Fabg4 Complexed With Coenzyme Nadh Length = 454

Iteration: 1
 Score = 66.2 bits (160), Expect = 2e-11,   Method: Compositional matrix adjust.
 Identities = 68/225 (30%), Positives = 104/225 (46%), Gaps = 36/225 (16%)
Query: 41  FSEDVSGKVVIITGASSGIGEHLAYEYXXXXXXXXXXXXXEKSLEEVADTAREIGSPDVI 100
           + + + GKV I+TGA+ GIG  +A E              E + E +A+TA ++G     
Sbjct: 207 WEKPLDGKVAIVTGAARGIGATIA-EVFARDGAHVVAIDVESAAENLAETASKVGG---T 262
Query: 101 TIRADVSKVDDCRSLVEETM--NHFGRLDHLVNNAGISSVALFEDIVNITDFKQIMNINF 158
            +  DV+  DD    + E +  +H G+ D LVNNAGI+   L   + N+ D +       
Sbjct: 263 ALWLDVT-ADDAVDKISEHLRDHHGGKADILVNNAGITRDKL---LANMDDAR------- 311
Query: 159 WGSVYTTRFAVPHLRYTK-----------GKIVVLSSAASWLTAPRMSFYNASKAALVLF 207
           W +V       P LR T+           G+++ LSS A        + Y  +KA ++  
Sbjct: 312 WDAVLAVNLLAP-LRLTEGLVGNGSIGEGGRVIGLSSIAGIAGNRGQTNYATTKAGMIGI 370
Query: 208 FETLRVELGSDVGVTI--VTPGFIESELTQGKFLT----GRRQNS 246
            + L   L +  G+TI  V PGFIE+++T    L     GRR NS
Sbjct: 371 TQALAPGLAAK-GITINAVAPGFIETQMTAAIPLATREVGRRLNS 414

>pdb|3Q6I|A Chain A, Crystal Structure Of Fabg4 And Coenzyme Binary Complex Length = 446

Iteration: 1
 Score = 66.2 bits (160), Expect = 2e-11,   Method: Compositional matrix adjust.
 Identities = 68/225 (30%), Positives = 104/225 (46%), Gaps = 36/225 (16%)
Query: 41  FSEDVSGKVVIITGASSGIGEHLAYEYXXXXXXXXXXXXXEKSLEEVADTAREIGSPDVI 100
           + + + GKV I+TGA+ GIG  +A E              E + E +A+TA ++G     
Sbjct: 199 WEKPLDGKVAIVTGAARGIGATIA-EVFARDGAHVVAIDVESAAENLAETASKVGG---T 254
Query: 101 TIRADVSKVDDCRSLVEETM--NHFGRLDHLVNNAGISSVALFEDIVNITDFKQIMNINF 158
            +  DV+  DD    + E +  +H G+ D LVNNAGI+   L   + N+ D +       
Sbjct: 255 ALWLDVT-ADDAVDKISEHLRDHHGGKADILVNNAGITRDKL---LANMDDAR------- 303
Query: 159 WGSVYTTRFAVPHLRYTK-----------GKIVVLSSAASWLTAPRMSFYNASKAALVLF 207
           W +V       P LR T+           G+++ LSS A        + Y  +KA ++  
Sbjct: 304 WDAVLAVNLLAP-LRLTEGLVGNGSIGEGGRVIGLSSIAGIAGNRGQTNYATTKAGMIGI 362
Query: 208 FETLRVELGSDVGVTI--VTPGFIESELTQGKFLT----GRRQNS 246
            + L   L +  G+TI  V PGFIE+++T    L     GRR NS
Sbjct: 363 TQALAPGLAAK-GITINAVAPGFIETQMTAAIPLATREVGRRLNS 406

>pdb|3M1L|A Chain A, Crystal Strucutre Of A C-Terminal Trunacted Mutant Of A Putative Ketoacyl Reductase (Fabg4) From Mycobacterium Tuberculosis H37rv At 2.5 Angstrom Resolution Length = 432

Iteration: 1
 Score = 65.9 bits (159), Expect = 2e-11,   Method: Compositional matrix adjust.
 Identities = 68/225 (30%), Positives = 104/225 (46%), Gaps = 36/225 (16%)
Query: 41  FSEDVSGKVVIITGASSGIGEHLAYEYXXXXXXXXXXXXXEKSLEEVADTAREIGSPDVI 100
           + + + GKV I+TGA+ GIG  +A E              E + E +A+TA ++G     
Sbjct: 191 WEKPLDGKVAIVTGAARGIGATIA-EVFARDGAHVVAIDVESAAENLAETASKVGG---T 246
Query: 101 TIRADVSKVDDCRSLVEETM--NHFGRLDHLVNNAGISSVALFEDIVNITDFKQIMNINF 158
            +  DV+  DD    + E +  +H G+ D LVNNAGI+   L   + N+ D +       
Sbjct: 247 ALWLDVT-ADDAVDKISEHLRDHHGGKADILVNNAGITRDKL---LANMDDAR------- 295
Query: 159 WGSVYTTRFAVPHLRYTK-----------GKIVVLSSAASWLTAPRMSFYNASKAALVLF 207
           W +V       P LR T+           G+++ LSS A        + Y  +KA ++  
Sbjct: 296 WDAVLAVNLLAP-LRLTEGLVGNGSIGEGGRVIGLSSIAGIAGNRGQTNYATTKAGMIGI 354
Query: 208 FETLRVELGSDVGVTI--VTPGFIESELTQGKFLT----GRRQNS 246
            + L   L +  G+TI  V PGFIE+++T    L     GRR NS
Sbjct: 355 TQALAPGLAAK-GITINAVAPGFIETQMTAAIPLATREVGRRLNS 398

>pdb|1ZEM|A Chain A, Crystal Structure Of Nad+-Bound Xylitol Dehydrogenase Length = 262

Iteration: 1
 Score = 65.9 bits (159), Expect = 2e-11,   Method: Compositional matrix adjust.
 Identities = 53/193 (27%), Positives = 91/193 (47%), Gaps = 7/193 (3%)
Query: 41  FSEDVSGKVVIITGASSGIGEHLAYEYXXXXXXXXXXXXXEKSLEEVADTAREIGSPDVI 100
            S+  +GKV ++TGA   IG   A                 ++LE+   + RE G  +  
Sbjct: 1   MSKKFNGKVCLVTGAGGNIGLATALRLAEEGTAIALLDMNREALEKAEASVREKGV-EAR 59
Query: 101 TIRADVSKVDDCRSLVEETMNHFGRLDHLVNNAGISSV-ALFEDIVNITDFKQIMNINFW 159
           +   DV+  +     V+  +  FG++D L NNAG     A  +D  +  DF +++ IN  
Sbjct: 60  SYVCDVTSEEAVIGTVDSVVRDFGKIDFLFNNAGYQGAFAPVQDYPS-DDFARVLTINVT 118
Query: 160 GSVYTTRFAVPHLRYTK--GKIVVLSSAASWLTAPRMSFYNASKAALVLFFETLRVELGS 217
           G+ +  + AV     T+  G+IV  +S A     P M+ Y  SK A++   ET  ++L  
Sbjct: 119 GAFHVLK-AVSRQMITQNYGRIVNTASMAGVKGPPNMAAYGTSKGAIIALTETAALDLAP 177
Query: 218 -DVGVTIVTPGFI 229
            ++ V  ++PG++
Sbjct: 178 YNIRVNAISPGYM 190

>pdb|4DA9|A Chain A, Crystal Structure Of Putative Short-Chain DehydrogenaseREDUCTASE FROM Sinorhizobium Meliloti 1021 Length = 280

Iteration: 1
 Score = 65.9 bits (159), Expect = 2e-11,   Method: Compositional matrix adjust.
 Identities = 46/151 (30%), Positives = 85/151 (56%), Gaps = 13/151 (8%)
Query: 99  VITIRADVSKVDDCRSLVEETMNHFGRLDHLVNNAGISSVALFEDIVNIT--DFKQIMNI 156
           VI +RAD++ +   ++ V+  +  FGR+D LVNNAGI+S+ + +D +++   +F  I+ +
Sbjct: 81  VIFLRADLADLSSHQATVDAVVAEFGRIDCLVNNAGIASI-VRDDFLDLKPENFDTIVGV 139
Query: 157 NFWGSVYTTRFAVPHLRYTKGK----IVVLSSAASWLTAPRMSFYNASKAALVLFFETLR 212
           N  G+V+ T+  +     +  +    I+ ++S ++  T+P    Y  SKA L  F + L 
Sbjct: 140 NLRGTVFFTQAVLKAXLASDARASRSIINITSVSAVXTSPERLDYCXSKAGLAAFSQGLA 199
Query: 213 VELGSDVGVTI--VTPGFIESELT---QGKF 238
           + L ++ G+ +  V PG I S+ T    GK+
Sbjct: 200 LRL-AETGIAVFEVRPGIIRSDXTAAVSGKY 229

>pdb|3T7C|A Chain A, Crystal Structure Of Carveol Dehydrogenase From Mycobacterium Avium Bound To Nad Length = 299

Iteration: 1
 Score = 65.9 bits (159), Expect = 2e-11,   Method: Compositional matrix adjust.
 Identities = 53/203 (26%), Positives = 95/203 (46%), Gaps = 14/203 (6%)
Query: 45  VSGKVVIITGASSGIGEHLAYEYXXXXXXXXXXXXXEK---------SLEEVADTAREIG 95
           V GKV  ITGA+ G G   A                ++         + +++A+T R++ 
Sbjct: 26  VEGKVAFITGAARGQGRSHAITLAREGADIIAIDVCKQLDGVKLPMSTPDDLAETVRQVE 85
Query: 96  S--PDVITIRADVSKVDDCRSLVEETMNHFGRLDHLVNNAGISSVALFEDIVNITDFKQI 153
           +    +I  + DV   D  ++ V++ +   GRLD ++ NA ++S     + ++   ++ +
Sbjct: 86  ALGRRIIASQVDVRDFDAMQAAVDDGVTQLGRLDIVLANAALASEGTRLNRMDPKTWRDM 145
Query: 154 MNINFWGSVYTTRFAVPHLRYTK--GKIVVLSSAASWLTAPRMSFYNASKAALVLFFETL 211
           +++N  G+  T R A+PH+   K  G IV  SS      A  +  Y ASK  L     T+
Sbjct: 146 IDVNLNGAWITARVAIPHIMAGKRGGSIVFTSSIGGLRGAENIGNYIASKHGLHGLMRTM 205
Query: 212 RVELGS-DVGVTIVTPGFIESEL 233
            +ELG  ++ V IV P  + + +
Sbjct: 206 ALELGPRNIRVNIVCPSSVATPM 228

>pdb|2BD0|A Chain A, Chlorobium Tepidum Sepiapterin Reductase Complexed With Nadp And Sepiapterin Length = 244

Iteration: 1
 Score = 65.1 bits (157), Expect = 3e-11,   Method: Compositional matrix adjust.
 Identities = 57/196 (29%), Positives = 87/196 (44%), Gaps = 15/196 (7%)
Query: 49  VVIITGASSGIGEHLAYEYXXXXXXXX-------XXXXXEKSLEEVADTAREIGS-PDVI 100
           +++ITGA  GIG  +A E+                       LE+++   R  G+  D I
Sbjct: 4   ILLITGAGKGIGRAIALEFARAARHHPDFEPVLVLSSRTAADLEKISLECRAEGALTDTI 63
Query: 101 TIRADVSKVDDCRSLVEETMNHFGRLDHLVNNAGISSVALFEDIVNITDFKQIMNINFWG 160
           T  AD+S + D R L    +  +G +D LVNNAG+       D+    DF   MN N  G
Sbjct: 64  T--ADISDMADVRRLTTHIVERYGHIDCLVNNAGVGRFGALSDLTE-EDFDYTMNTNLKG 120
Query: 161 SVYTTR--FAVPHLRYTKGKIVVLSSAASWLTAPRMSFYNASKAALVLFFETLRV-ELGS 217
           + + T+  FA+   R   G I  ++S A+       S Y  SK       ET+R+     
Sbjct: 121 TFFLTQALFALME-RQHSGHIFFITSVAATKAFRHSSIYCMSKFGQRGLVETMRLYARKC 179
Query: 218 DVGVTIVTPGFIESEL 233
           +V +T V PG + + +
Sbjct: 180 NVRITDVQPGAVYTPM 195

>pdb|4DYV|A Chain A, Crystal Structure Of A Short-Chain DehydrogenaseREDUCTASE SDR FROM Xanthobacter Autotrophicus Py2 Length = 272

Iteration: 1
 Score = 65.1 bits (157), Expect = 4e-11,   Method: Compositional matrix adjust.
 Identities = 48/161 (29%), Positives = 81/161 (50%), Gaps = 9/161 (5%)
Query: 48  KVVIITGASSGIGEHLAYEYXXXXXXXXXXXXXEKSLEEVADTAREIGSPDVITIRADVS 107
           K+ I+TGA SG+G  +A                 + L+ + +TA EIG  D + +  DV+
Sbjct: 29  KIAIVTGAGSGVGRAVAVALAGAGYGVALAG---RRLDALQETAAEIGD-DALCVPTDVT 84
Query: 108 KVDDCRSLVEETMNHFGRLDHLVNNAGISSVALFEDIVNITDFKQIMNINFWGSVYTTR- 166
             D  R+L   T+  FGR+D L NNAG  + A+  + +    +KQ+++ N  G    T+ 
Sbjct: 85  DPDSVRALFTATVEKFGRVDVLFNNAGTGAPAIPXEDLTFAQWKQVVDTNLTGPFLCTQE 144
Query: 167 -FAVPHLRYTKGKIVVLSSAASWLTAPRM--SFYNASKAAL 204
            F V   +  +G  ++ + + S  T+PR   + Y A+K A+
Sbjct: 145 AFRVXKAQEPRGGRIINNGSIS-ATSPRPYSAPYTATKHAI 184

>pdb|3V2H|A Chain A, The Crystal Structure Of D-Beta-Hydroxybutyrate Dehydrogenase From Sinorhizobium Meliloti Length = 281

Iteration: 1
 Score = 64.7 bits (156), Expect = 4e-11,   Method: Compositional matrix adjust.
 Identities = 52/192 (27%), Positives = 91/192 (47%), Gaps = 6/192 (3%)
Query: 48  KVVIITGASSGIGEHLAYEYXXXXXXXXXXX-XXEKSLEEVADTAREIGSPDVITIRADV 106
           K  +ITG++SGIG  +A                    +  V D    + S  V+   AD 
Sbjct: 26  KTAVITGSTSGIGLAIARTLAKAGANIVLNGFGAPDEIRTVTDEVAGLSSGTVLHHPADX 85
Query: 107 SKVDDCRSLVEETMNHFGRLDHLVNNAGISSVALFEDIVNITDFKQIMNINFWGSVYTTR 166
           +K  +         + FG  D LVNNAG+  V   ED   +  + +I+ +N   S +T R
Sbjct: 86  TKPSEIADXXAXVADRFGGADILVNNAGVQFVEKIEDF-PVEQWDRIIAVNLSSSFHTIR 144
Query: 167 FAVPHLRYTK-GKIVVLSSAASWLTAPRMSFYNASKAALVLFFETLRVELGSDVGVTI-- 223
            A+P  +    G+I+ ++SA   + +P  S Y A+K  +    +T+ +E+ ++ GVT+  
Sbjct: 145 GAIPPXKKKGWGRIINIASAHGLVASPFKSAYVAAKHGIXGLTKTVALEV-AESGVTVNS 203
Query: 224 VTPGFIESELTQ 235
           + PG++ + L +
Sbjct: 204 ICPGYVLTPLVE 215

>pdb|1Q7C|A Chain A, The Structure Of Betaketoacyl-[acp] Reductase Y151f Mutant In Complex With Nadph Fragment Length = 244

Iteration: 1
 Score = 64.7 bits (156), Expect = 4e-11,   Method: Compositional matrix adjust.
 Identities = 52/192 (27%), Positives = 93/192 (48%), Gaps = 9/192 (4%)
Query: 47  GKVVIITGASSGIGEHLAYEYXXXXXXXXXXXXXEKSLEEVADTAREIGSPDVITIRADV 106
           GK+ ++TGAS GIG  +A                E   + ++D     G   ++    +V
Sbjct: 5   GKIALVTGASRGIGRAIAETLAARGAKVIGTATSENGAQAISDYLGANGKGLML----NV 60
Query: 107 SKVDDCRSLVEETMNHFGRLDHLVNNAGISSVALFEDIVNITDFKQIMNINFWGSVYTTR 166
           +      S++E+    FG +D LVNNAGI+   L   + +  ++  I+  N   SV+   
Sbjct: 61  TDPASIESVLEKIRAEFGEVDILVNNAGITRDNLLMRMKD-EEWNDIIETNLS-SVFRLS 118
Query: 167 FAV--PHLRYTKGKIVVLSSAASWLTAPRMSFYNASKAALVLFFETLRVELGS-DVGVTI 223
            AV    ++   G+I+ + S    +     + + A+KA L+ F ++L  E+ S  + V +
Sbjct: 119 KAVMRAMMKKRHGRIITIGSVVGTMGNGGQANFAAAKAGLIGFSKSLAREVASRGITVNV 178
Query: 224 VTPGFIESELTQ 235
           V PGFIE+++T+
Sbjct: 179 VAPGFIETDMTR 190

>pdb|1ULS|A Chain A, Crystal Structure Of Tt0140 From Thermus Thermophilus Hb8 Length = 245

Iteration: 1
 Score = 64.7 bits (156), Expect = 4e-11,   Method: Compositional matrix adjust.
 Identities = 55/188 (29%), Positives = 86/188 (45%), Gaps = 8/188 (4%)
Query: 48  KVVIITGASSGIGEHLAYEYXXXXXXXXXXXXXEKSLEEVADTAREIGSPDVITIRADVS 107
           K V+ITGA+ GIG      +             E  L E A+    +G+  V+   AD +
Sbjct: 6   KAVLITGAAHGIGRATLELFAKEGARLVACDIEEGPLREAAEA---VGAHPVVXDVADPA 62
Query: 108 KVDDCRSLVEETMNHFGRLDHLVNNAGISSVALFEDIVNITDFKQIMNINFWGSVYTTRF 167
            V+       E + H GRLD +V+ AGI+    F     + D++ ++ +N  GS    + 
Sbjct: 63  SVERG---FAEALAHLGRLDGVVHYAGITRDN-FHWKXPLEDWELVLRVNLTGSFLVAKA 118
Query: 168 AVPHLRYTKGKIVVLSSAASWLTAPRMSFYNASKAALVLFFETLRVELGS-DVGVTIVTP 226
           A    R      +VL+++  +L     + Y AS A +V    TL +ELG   + V  + P
Sbjct: 119 ASEAXREKNPGSIVLTASRVYLGNLGQANYAASXAGVVGLTRTLALELGRWGIRVNTLAP 178
Query: 227 GFIESELT 234
           GFIE+  T
Sbjct: 179 GFIETRXT 186

>pdb|1GEG|A Chain A, Cryatal Structure Analysis Of Meso-2,3-Butanediol Dehydrogenase Length = 256

Iteration: 1
 Score = 64.7 bits (156), Expect = 4e-11,   Method: Compositional matrix adjust.
 Identities = 51/191 (26%), Positives = 90/191 (47%), Gaps = 9/191 (4%)
Query: 48  KVVIITGASSGIGEHLAYEYXXXXXXXXXXXXXEKSLEEVADTAREIGSPDVITIRADVS 107
           KV ++TGA  GIG+ +A                + + + VA    + G    + ++ DVS
Sbjct: 3   KVALVTGAGQGIGKAIALRLVKDGFAVAIADYNDATAKAVASEINQAGG-HAVAVKVDVS 61
Query: 108 KVDDCRSLVEETMNHFGRLDHLVNNAGISSVALFEDIV-NITDFKQIMNINFWGSVYTTR 166
             D   + VE+     G  D +VNNAG++     E I   I D  ++ NIN  G ++  +
Sbjct: 62  DRDQVFAAVEQARKTLGGFDVIVNNAGVAPSTPIESITPEIVD--KVYNINVKGVIWGIQ 119
Query: 167 FAVPHLRYT--KGKIVVLSSAASWLTAPRMSFYNASKAALVLFFETLRVELGSDVGVTI- 223
            AV   +     GKI+   S A  +  P ++ Y++SK A+    +T   +L + +G+T+ 
Sbjct: 120 AAVEAFKKEGHGGKIINACSQAGHVGNPELAVYSSSKFAVRGLTQTAARDL-APLGITVN 178
Query: 224 -VTPGFIESEL 233
              PG +++ +
Sbjct: 179 GYCPGIVKTPM 189

>pdb|4AFN|A Chain A, Crystal Structure Of 3-ketoacyl-(acyl-carrier-protein) Reductase (fabg) From Pseudomonas Aeruginosa At 2.3a Resolution Length = 269

Iteration: 1
 Score = 64.7 bits (156), Expect = 5e-11,   Method: Compositional matrix adjust.
 Identities = 61/201 (30%), Positives = 97/201 (48%), Gaps = 14/201 (6%)
Query: 42  SEDVSGKVVIITGASSGIGEHLAYEYXXXXXXXXXXXXXEKSLEEVADTAREIGSPDVIT 101
           S  + GKV ++TGAS GIG+ +A E                  E++A+T +  G      
Sbjct: 22  SMSLQGKVALVTGASRGIGQAIALELGRLGAVVIGTATSASGAEKIAETLKANGVEGAGL 81
Query: 102 IRADVSKVDDCRSLVEETMNHFGRLDHLVNNAGISSVALFEDIVNITDFK--QIMNINFW 159
           +  DVS  +   + +E    H G+   +VNNAGI+   L   +V + D +   ++N N  
Sbjct: 82  V-LDVSSDESVAATLEHIQQHLGQPLIVVNNAGITRDNL---LVRMKDDEWFDVVNTNL- 136
Query: 160 GSVYTTRFAVPHLR-YTK---GKIVVLSSAASWLTAPRMSFYNASKAALVLFFETLRVEL 215
            S+Y  R +   LR  TK   G+I+ + S    +     + Y A+KA L  F   L  E+
Sbjct: 137 NSLY--RLSKAVLRGMTKARWGRIINIGSVVGAMGNAGQTNYAAAKAGLEGFTRALAREV 194
Query: 216 GSD-VGVTIVTPGFIESELTQ 235
           GS  + V  V PGFI++++T+
Sbjct: 195 GSRAITVNAVAPGFIDTDMTR 215

>pdb|4E6P|A Chain A, Crystal Structure Of A Probable Sorbitol Dehydrogenase (Target Psi- 012078) From Sinorhizobium Meliloti 1021 Length = 259

Iteration: 1
 Score = 64.3 bits (155), Expect = 7e-11,   Method: Compositional matrix adjust.
 Identities = 61/212 (28%), Positives = 99/212 (46%), Gaps = 17/212 (8%)
Query: 45  VSGKVVIITGASSGIGEHLAYEYXXXXXXXXXXXXXEKSLEEVADTAREIGSPDVITIRA 104
           + GK  +ITG++ GIG   A  Y             +  +E     A EIG P    ++ 
Sbjct: 6   LEGKSALITGSARGIGRAFAEAYVREGATVAIA---DIDIERARQAAAEIG-PAAYAVQX 61
Query: 105 DVSKVDDCRSLVEETMNHFGRLDHLVNNAGISSVALFE--DIVNIT--DFKQIMNINFWG 160
           DV++ D   + +  T+ H G LD LVNNA     ALF+   IV IT   ++++  IN  G
Sbjct: 62  DVTRQDSIDAAIAATVEHAGGLDILVNNA-----ALFDLAPIVEITRESYEKLFAINVAG 116
Query: 161 SVYTTRFAVPHLRYT--KGKIVVLSSAASWLTAPRMSFYNASKAALVLFFETLRVEL-GS 217
           +++T + A          GKI+  +S A       ++ Y A+KAA++   ++  ++L   
Sbjct: 117 TLFTLQAAARQXIAQGRGGKIINXASQAGRRGEALVAIYCATKAAVISLTQSAGLDLIKH 176
Query: 218 DVGVTIVTPGFIESELTQG-KFLTGRRQNSDR 248
            + V  + PG ++ E   G   L  R +N  R
Sbjct: 177 RINVNAIAPGVVDGEHWDGVDALFARYENRPR 208

>pdb|3RSH|A Chain A, Structure Of 3-Ketoacyl-(Acyl-Carrier-Protein)reductase (Fabg) From Vibrio Cholerae O1 Complexed With Nadp+ (Space Group P62) Length = 251

Iteration: 1
 Score = 63.9 bits (154), Expect = 7e-11,   Method: Compositional matrix adjust.
 Identities = 51/195 (26%), Positives = 96/195 (49%), Gaps = 9/195 (4%)
Query: 44  DVSGKVVIITGASSGIGEHLAYEYXXXXXXXXXXXXXEKSLEEVADTAREIGSPDVITIR 103
           ++ GKV ++TGAS GIG+ +A                E   + ++D   + G    +   
Sbjct: 9   NLEGKVALVTGASRGIGKAIAELLAERGAKVIGTATSESGAQAISDYLGDNGKGMAL--- 65
Query: 104 ADVSKVDDCRSLVEETMNHFGRLDHLVNNAGISSVALFEDIVNITDFKQIMNINFWGSVY 163
            +V+  +   ++++   + FG +D LVNNAGI+   L   +    ++  IM  N   S++
Sbjct: 66  -NVTNPESIEAVLKAITDEFGGVDILVNNAGITRDNLLMRMKE-EEWSDIMETNLT-SIF 122
Query: 164 TTRFAV--PHLRYTKGKIVVLSSAASWLTAPRMSFYNASKAALVLFFETLRVELGS-DVG 220
               AV    ++  +G+I+ + S    +     + Y A+KA ++ F +++  E+ S  V 
Sbjct: 123 RLSKAVLRGMMKKRQGRIINVGSVVGTMGNAGQANYAAAKAGVIGFTKSMAREVASRGVT 182
Query: 221 VTIVTPGFIESELTQ 235
           V  V PGFIE+++T+
Sbjct: 183 VNTVAPGFIETDMTK 197

>pdb|3IMF|A Chain A, 1.99 Angstrom Resolution Crystal Structure Of A Short Chain Dehydrogenase From Bacillus Anthracis Str. 'ames Ancestor' Length = 257

Iteration: 1
 Score = 63.9 bits (154), Expect = 7e-11,   Method: Compositional matrix adjust.
 Identities = 55/187 (29%), Positives = 92/187 (49%), Gaps = 6/187 (3%)
Query: 48  KVVIITGASSGIGEHLAYEYXXXXXXXXXXXXXEKSLEEVADTAREIGSPDVITIRADVS 107
           KVVIITG SSG G+  A  +             ++ LEE A    E     ++T++ DV 
Sbjct: 7   KVVIITGGSSGXGKGXATRFAKEGARVVITGRTKEKLEE-AKLEIEQFPGQILTVQXDVR 65
Query: 108 KVDDCRSLVEETMNHFGRLDHLVNNAGISSVALFEDIVNITDFKQIMNINFWGSVYTTRF 167
             DD +  +E+    FGR+D L+NNA  + +   ED+ ++  +  ++NI   G+ Y ++ 
Sbjct: 66  NTDDIQKXIEQIDEKFGRIDILINNAAGNFICPAEDL-SVNGWNSVINIVLNGTFYCSQA 124
Query: 168 AVPHL--RYTKGKIVVLSSAASWLTAPRMSFYNASKAALVLFFETLRVELGSDVGVTI-- 223
              +   +  KG I+   +  +W   P +    A+KA ++   +TL VE G   G+ +  
Sbjct: 125 IGKYWIEKGIKGNIINXVATYAWDAGPGVIHSAAAKAGVLAXTKTLAVEWGRKYGIRVNA 184
Query: 224 VTPGFIE 230
           + PG IE
Sbjct: 185 IAPGPIE 191

>pdb|2GDZ|A Chain A, Crystal Structure Of 15-Hydroxyprostaglandin Dehydrogenase Type1, Complexed With Nad+ Length = 267

Iteration: 1
 Score = 63.9 bits (154), Expect = 8e-11,   Method: Compositional matrix adjust.
 Identities = 53/211 (25%), Positives = 90/211 (42%), Gaps = 25/211 (11%)
Query: 45  VSGKVVIITGASSGIGEHLAYEYXXXXXXXXXXX-XXEKSLEEVADTAREIGSPDVITIR 103
           V+GKV ++TGA+ GIG   A                 E  ++  A    +      + I+
Sbjct: 5   VNGKVALVTGAAQGIGRAFAEALLLKGAKVALVDWNLEAGVQCKAALHEQFEPQKTLFIQ 64
Query: 104 ADVSKVDDCRSLVEETMNHFGRLDHLVNNAGISSVALFEDIVNITDFKQIMNINFWGSVY 163
            DV+     R    + ++HFGRLD LVNNAG++         N  ++++ + IN    + 
Sbjct: 65  CDVADQQQLRDTFRKVVDHFGRLDILVNNAGVN---------NEKNWEKTLQINLVSVIS 115
Query: 164 TTRFAVPHLRYTKGK----IVVLSSAASWLTAPRMSFYNASKAALVLFFETLRVE---LG 216
            T   + ++    G     I+ +SS A  +   +   Y ASK  +V F  +  +    + 
Sbjct: 116 GTYLGLDYMSKQNGGEGGIIINMSSLAGLMPVAQQPVYCASKHGIVGFTRSAALAANLMN 175
Query: 217 SDVGVTIVTPGF--------IESELTQGKFL 239
           S V +  + PGF        IE E   G+++
Sbjct: 176 SGVRLNAICPGFVNTAILESIEKEENMGQYI 206

>pdb|3PGX|A Chain A, Crystal Structure Of A Putative Carveol Dehydrogenase From Mycobacterium Paratuberculosis Bound To Nicotinamide Adenine Dinucleotide Length = 280

Iteration: 1
 Score = 63.5 bits (153), Expect = 1e-10,   Method: Compositional matrix adjust.
 Identities = 60/188 (31%), Positives = 83/188 (44%), Gaps = 19/188 (10%)
Query: 45  VSGKVVIITGASSGIGE----HLAYE------YXXXXXXXXXXXXXEKSLEEVADTAR-- 92
           + G+V  ITGA+ G G      LA E                      S E++ +TAR  
Sbjct: 13  LQGRVAFITGAARGQGRSHAVRLAAEGADIIACDICAPVSASVTYAPASPEDLDETARLV 72
Query: 93  EIGSPDVITIRADVSKVDDCRSLVEETMNHFGRLDHLVNNAGISSVALFEDIVNITD--F 150
           E      +T   DV      R LV + M  FGRLD +V NAG+ S   +  +  +TD  +
Sbjct: 73  EDQGRKALTRVLDVRDDAALRELVADGMEQFGRLDVVVANAGVLS---WGRVWELTDEQW 129
Query: 151 KQIMNINFWGSVYTTRFAVPHL--RYTKGKIVVLSSAASWLTAPRMSFYNASKAALVLFF 208
             ++ +N  G+  T R  VP +      G IVV+SS+A     P    Y+ASK  L    
Sbjct: 130 DTVIGVNLTGTWRTLRATVPAMIEAGNGGSIVVVSSSAGLKATPGNGHYSASKHGLTALT 189
Query: 209 ETLRVELG 216
            TL +ELG
Sbjct: 190 NTLAIELG 197

>pdb|3U0B|A Chain A, Crystal Structure Of An Oxidoreductase From Mycobacterium Smegmatis Length = 454

Iteration: 1
 Score = 63.5 bits (153), Expect = 1e-10,   Method: Compositional matrix adjust.
 Identities = 65/224 (29%), Positives = 103/224 (45%), Gaps = 34/224 (15%)
Query: 41  FSEDVSGKVVIITGASSGIGEHLAYEYXXXXXXXXXXXXXEKSLEEVADTAREIGSPDV- 99
           + + + GKV ++TGA+ GIG  +A E              + + E++   A ++G   + 
Sbjct: 207 WDKPLDGKVAVVTGAARGIGATIA-EVFARDGATVVAIDVDGAAEDLKRVADKVGGTALT 265
Query: 100 ITIRADVSKVDDCRSLVEETMNHFGRLDHLVNNAGISSVALFEDIVNITDFKQIMNINFW 159
           + + AD   VD   + V E  +H G++D LVNNAGI+   L  +          M+   W
Sbjct: 266 LDVTAD-DAVDKITAHVTE--HHGGKVDILVNNAGITRDKLLAN----------MDEKRW 312
Query: 160 GSVYTTRFAVPHLRYTK-----------GKIVVLSSAASWLTAPRMSFYNASKAALVLFF 208
            +V       P  R T+           G+++ LSS A        + Y  +KA ++   
Sbjct: 313 DAVIAVNLLAPQ-RLTEGLVGNGTIGEGGRVIGLSSMAGIAGNRGQTNYATTKAGMIGLA 371
Query: 209 ETLRVELGSDVGVTI--VTPGFIESELTQGKFLT----GRRQNS 246
           E L   L +D G+TI  V PGFIE+++T+   L     GRR NS
Sbjct: 372 EALAPVL-ADKGITINAVAPGFIETKMTEAIPLATREVGRRLNS 414

>pdb|3IOY|A Chain A, Structure Of Putative Short-Chain Dehydrogenase (Saro_0793) From Novosphingobium Aromaticivorans Length = 319

Iteration: 1
 Score = 63.5 bits (153), Expect = 1e-10,   Method: Compositional matrix adjust.
 Identities = 50/200 (25%), Positives = 94/200 (47%), Gaps = 14/200 (7%)
Query: 43  EDVSGKVVIITGASSGIGEHLAYEYXXXXXXXXXXXXXEKSLEEVADTAREIGS-PDVIT 101
           +D +G+   +TG ++G+G  L  +              + S+++   T    GS P+V+ 
Sbjct: 4   KDFAGRTAFVTGGANGVGIGLVRQLLNQGCKVAIADIRQDSIDKALATLEAEGSGPEVMG 63
Query: 102 IRADVSKVDDCRSLVEETMNHFGRLDHLVNNAGISSVALFEDI--VNITDFKQIMNINFW 159
           ++ DV+  +  +   +E    FG +  L NNAG++   LF+ I   +  D+  ++ +N  
Sbjct: 64  VQLDVASREGFKMAADEVEARFGPVSILCNNAGVN---LFQPIEESSYDDWDWLLGVNLH 120
Query: 160 GSVYTTRFAVPHL-------RYTKGKIVVLSSAASWLTAPRMSFYNASKAALVLFFETLR 212
           G V      VP +           G +V  +S A++L A     YN +K A+    E+L 
Sbjct: 121 GVVNGVTTFVPRMVERVKAGEQKGGHVVNTASMAAFLAAGSPGIYNTTKFAVRGLSESLH 180
Query: 213 VE-LGSDVGVTIVTPGFIES 231
              L  ++GV+++ PG ++S
Sbjct: 181 YSLLKYEIGVSVLCPGLVKS 200

>pdb|2NWQ|A Chain A, Short Chain Dehydrogenase From Pseudomonas Aeruginosa Length = 272

Iteration: 1
 Score = 63.2 bits (152), Expect = 1e-10,   Method: Compositional matrix adjust.
 Identities = 56/195 (28%), Positives = 86/195 (44%), Gaps = 9/195 (4%)
Query: 49  VVIITGASSGIGEHLAYEYXXXXXXXXXXXXXEKSLEEVAD--TAREIGSPDVITIRADV 106
            + ITGA+SG GE  A  +             E+ L+ +A   +A+    P  + +R   
Sbjct: 23  TLFITGATSGFGEACARRFAEAGWSLVLTGRREERLQALAGELSAKTRVLPLTLDVRDRA 82
Query: 107 SKVDDCRSLVEETMNHFGRLDHLVNNAGISSVALFEDIVNITDFKQIMNINFWGSVYTTR 166
           +      +L EE    F  L  L+NNAG++         ++ D+   ++ N  G +Y+TR
Sbjct: 83  AXSAAVDNLPEE----FATLRGLINNAGLALGTDPAQSCDLDDWDTXVDTNIKGLLYSTR 138
Query: 167 FAVPHL--RYTKGKIVVLSSAASWLTAPRMSFYNASKAALVLFFETLRVEL-GSDVGVTI 223
             +P L        IV L S A     P    Y  +KA +  F   LR +L G+ V VT 
Sbjct: 139 LLLPRLIAHGAGASIVNLGSVAGKWPYPGSHVYGGTKAFVEQFSLNLRCDLQGTGVRVTN 198
Query: 224 VTPGFIESELTQGKF 238
           + PG  ESE +  +F
Sbjct: 199 LEPGLCESEFSLVRF 213

>pdb|3UCX|A Chain A, The Structure Of A Short Chain Dehydrogenase From Mycobacterium Smegmatis Length = 264

Iteration: 1
 Score = 62.8 bits (151), Expect = 2e-10,   Method: Compositional matrix adjust.
 Identities = 48/184 (26%), Positives = 86/184 (46%), Gaps = 4/184 (2%)
Query: 48  KVVIITGASSGIGEHLAYEYXXXXXXXXXXXXXEKSLEEVADTAREIGSPDVITIRADVS 107
           KVV+I+G    +G  LA                 + LE+VA    + G    +++  D++
Sbjct: 12  KVVVISGVGPALGTTLARRCAEQGADLVLAARTVERLEDVAKQVTDTGR-RALSVGTDIT 70
Query: 108 KVDDCRSLVEETMNHFGRLDHLVNNA-GISSVALFEDIVNITDFKQIMNINFWGSVYTTR 166
                  LV+ETM  +GR+D ++NNA  + S+  F +       +  + +  +G++   +
Sbjct: 71  DDAQVAHLVDETMKAYGRVDVVINNAFRVPSMKPFAN-TTFEHMRDAIELTVFGALRLIQ 129
Query: 167 FAVPHLRYTKGKIVVLSSAASWLTAPRMSFYNASKAALVLFFETLRVELGSD-VGVTIVT 225
              P L  +KG +V ++S     +  +   Y  +K+AL+   +TL  ELG   + V  V 
Sbjct: 130 GFTPALEESKGAVVNVNSMVVRHSQAKYGAYKMAKSALLAMSQTLATELGEKGIRVNSVL 189
Query: 226 PGFI 229
           PG+I
Sbjct: 190 PGYI 193

>pdb|4ESO|A Chain A, Crystal Structure Of A Putative Oxidoreductase Protein From Sinorhizobium Meliloti 1021 In Complex With Nadp Length = 255

Iteration: 1
 Score = 62.4 bits (150), Expect = 2e-10,   Method: Compositional matrix adjust.
 Identities = 48/141 (34%), Positives = 71/141 (50%), Gaps = 3/141 (2%)
Query: 92  REIGSPDVITIRADVSKVDDCRSLVEETMNHFGRLDHLVNNAGISSVALFEDIVNITDFK 151
           RE   P V  +R+D++ +++   L        G +D L  NAG+S +  F D V+   + 
Sbjct: 49  REEFGPRVHALRSDIADLNEIAVLGAAAGQTLGAIDLLHINAGVSELEPF-DQVSEASYD 107
Query: 152 QIMNINFWGSVYTTRFAVPHLRYTKGKIVVLSSAASWLTAPRMSFYNASKAALVLFFETL 211
           +   +N  G+ +T +   P +R   G IV  SS A     P  S Y+ASKAALV F   L
Sbjct: 108 RQFAVNTKGAFFTVQRLTPLIR-EGGSIVFTSSVADEGGHPGXSVYSASKAALVSFASVL 166
Query: 212 RVE-LGSDVGVTIVTPGFIES 231
             E L   + V  V+PGFI++
Sbjct: 167 AAELLPRGIRVNSVSPGFIDT 187

>pdb|3VC7|A Chain A, Crystal Structure Of A Putative Oxidoreductase From Sinorhizobium Meliloti 1021 Length = 254

Iteration: 1
 Score = 62.4 bits (150), Expect = 2e-10,   Method: Compositional matrix adjust.
 Identities = 48/141 (34%), Positives = 71/141 (50%), Gaps = 3/141 (2%)
Query: 92  REIGSPDVITIRADVSKVDDCRSLVEETMNHFGRLDHLVNNAGISSVALFEDIVNITDFK 151
           RE   P V  +R+D++ +++   L        G +D L  NAG+S +  F D V+   + 
Sbjct: 48  REEFGPRVHALRSDIADLNEIAVLGAAAGQTLGAIDLLHINAGVSELEPF-DQVSEASYD 106
Query: 152 QIMNINFWGSVYTTRFAVPHLRYTKGKIVVLSSAASWLTAPRMSFYNASKAALVLFFETL 211
           +   +N  G+ +T +   P +R   G IV  SS A     P  S Y+ASKAALV F   L
Sbjct: 107 RQFAVNTKGAFFTVQRLTPLIR-EGGSIVFTSSVADEGGHPGXSVYSASKAALVSFASVL 165
Query: 212 RVE-LGSDVGVTIVTPGFIES 231
             E L   + V  V+PGFI++
Sbjct: 166 AAELLPRGIRVNSVSPGFIDT 186

>pdb|3AK4|A Chain A, Crystal Structure Of Nadh-Dependent Quinuclidinone Reductase From Agrobacterium Tumefaciens Length = 263

Iteration: 1
 Score = 62.4 bits (150), Expect = 2e-10,   Method: Compositional matrix adjust.
 Identities = 53/197 (26%), Positives = 91/197 (46%), Gaps = 12/197 (6%)
Query: 44  DVSGKVVIITGASSGIGEHLAYEYXXXXXXXXXXXXXEKSLEEVADTAREIGSPDVITIR 103
           D+SG+  I+TG S GIG  +A                  + + V       G      + 
Sbjct: 9   DLSGRKAIVTGGSKGIGAAIARALDKAGATVAIADLDVMAAQAVVAGLENGG----FAVE 64
Query: 104 ADVSKVDDCRSLVEETMNHFGRLDHLVNNAGISSVALFEDIVNITDFKQIMN--INFWGS 161
            DV+K     + +++ ++  G  D L  NAG+S++      V+ITD +   N  +N  G 
Sbjct: 65  VDVTKRASVDAAMQKAIDALGGFDLLCANAGVSTM---RPAVDITDEEWDFNFDVNARGV 121
Query: 162 VYTTRFAVPHL--RYTKGKIVVLSSAASWLTAPRMSFYNASKAALVLFFETLRVELG-SD 218
               + A  H     TKG IV  +S A+ + AP ++ Y+ASK A+  + + L  E+   +
Sbjct: 122 FLANQIACRHFLASNTKGVIVNTASLAAKVGAPLLAHYSASKFAVFGWTQALAREMAPKN 181
Query: 219 VGVTIVTPGFIESELTQ 235
           + V  V PGF+++ + +
Sbjct: 182 IRVNCVCPGFVKTAMQE 198

>pdb|3TZC|A Chain A, Crystal Structure Of 3-Ketoacyl-(Acyl-Carrier-Protein) Reductase (Fabg)(Y155f) From Vibrio Cholerae Length = 251

Iteration: 1
 Score = 62.4 bits (150), Expect = 2e-10,   Method: Compositional matrix adjust.
 Identities = 50/195 (25%), Positives = 96/195 (49%), Gaps = 9/195 (4%)
Query: 44  DVSGKVVIITGASSGIGEHLAYEYXXXXXXXXXXXXXEKSLEEVADTAREIGSPDVITIR 103
           ++ GKV ++TGAS GIG+ +A                E   + ++D   + G    +   
Sbjct: 9   NLEGKVALVTGASRGIGKAIAELLAERGAKVIGTATSESGAQAISDYLGDNGKGMAL--- 65
Query: 104 ADVSKVDDCRSLVEETMNHFGRLDHLVNNAGISSVALFEDIVNITDFKQIMNINFWGSVY 163
            +V+  +   ++++   + FG +D LVNNAGI+   L   +    ++  IM  N   S++
Sbjct: 66  -NVTNPESIEAVLKAITDEFGGVDILVNNAGITRDNLLMRMKE-EEWSDIMETNLT-SIF 122
Query: 164 TTRFAV--PHLRYTKGKIVVLSSAASWLTAPRMSFYNASKAALVLFFETLRVELGS-DVG 220
               AV    ++  +G+I+ + S    +     + + A+KA ++ F +++  E+ S  V 
Sbjct: 123 RLSKAVLRGMMKKRQGRIINVGSVVGTMGNAGQANFAAAKAGVIGFTKSMAREVASRGVT 182
Query: 221 VTIVTPGFIESELTQ 235
           V  V PGFIE+++T+
Sbjct: 183 VNTVAPGFIETDMTK 197

>pdb|3KZV|A Chain A, The Crystal Structure Of A Cytoplasmic Protein With Unknown Function From Saccharomyces Cerevisiae Length = 254

Iteration: 1
 Score = 62.0 bits (149), Expect = 3e-10,   Method: Compositional matrix adjust.
 Identities = 49/187 (26%), Positives = 87/187 (46%), Gaps = 3/187 (1%)
Query: 47  GKVVIITGASSGIGEHLAYEYXXXXXXXXXXXXXEKSLEEVADTAREIGSPDVITIRADV 106
           GKV+++TG S GIG+ +  +               +S   +     + G      +  D+
Sbjct: 2   GKVILVTGVSRGIGKSIV-DVLFSLDKDTVVYGVARSEAPLKKLKEKYGD-RFFYVVGDI 59
Query: 107 SKVDDCRSLVEETMNHFGRLDHLVNNAGISSVALFEDIVNITDFKQIMNINFWGSVYTTR 166
           ++    + LV   +   G++D LV NAG+       + +++  +K++ +INF+  V    
Sbjct: 60  TEDSVLKQLVNAAVKGHGKIDSLVANAGVLEPVQNVNEIDVNAWKKLYDINFFSIVSLVG 119
Query: 167 FAVPHLRYTKGKIVVLSSAASWLTAPRMSFYNASKAALVLFFETLRVELGSDVGVTIVTP 226
            A+P L+ T G +V +SS A  +       Y +SKAAL  F  TL  E    V    V P
Sbjct: 120 IALPELKKTNGNVVFVSSDACNMYFSSWGAYGSSKAALNHFAMTLANE-ERQVKAIAVAP 178
Query: 227 GFIESEL 233
           G +++++
Sbjct: 179 GIVDTDM 185

>pdb|3CXR|A Chain A, Crystal Structure Of Gluconate 5-Dehydrogase From Streptococcus Suis Type 2 Length = 291

Iteration: 1
 Score = 62.0 bits (149), Expect = 3e-10,   Method: Compositional matrix adjust.
 Identities = 54/206 (26%), Positives = 96/206 (46%), Gaps = 9/206 (4%)
Query: 35  SVFNSIFSED---VSGKVVIITGASSGIGEHLAYEYXXXXXXXXXXXXXEKSLEEVADTA 91
           S  N  FS D   + GK+ ++TGAS GIG  +A  Y             ++ L +    A
Sbjct: 19  SHMNQQFSLDQFSLKGKIALVTGASYGIGFAIASAYAKAGATIVFNDINQE-LVDRGMAA 77
Query: 92  REIGSPDVITIRADVSKVDDCRSLVEETMNHFGRLDHLVNNAG-ISSVALFEDIVNITDF 150
            +    +      DV+  D  +++V +  +  G +D LVNNAG I  V + E  +    F
Sbjct: 78  YKAAGINAHGYVCDVTDEDGIQAMVAQIESEVGIIDILVNNAGIIRRVPMIE--MTAAQF 135
Query: 151 KQIMNINFWGSVYTTRFAVPHL-RYTKGKIVVLSSAASWLTAPRMSFYNASKAALVLFFE 209
           +Q+++I+       ++  +P + +   GKI+ + S  S L    +S Y A+K  L +  +
Sbjct: 136 RQVIDIDLNAPFIVSKAVIPSMIKKGHGKIINICSMMSELGRETVSAYAAAKGGLKMLTK 195
Query: 210 TLRVELG-SDVGVTIVTPGFIESELT 234
            +  E G +++    + PG+I +  T
Sbjct: 196 NIASEYGEANIQCNGIGPGYIATPQT 221

>pdb|3M1A|A Chain A, The Crystal Structure Of A Short-Chain Dehydrogenase From Streptomyces Avermitilis To 2a Length = 281

Iteration: 1
 Score = 61.6 bits (148), Expect = 4e-10,   Method: Compositional matrix adjust.
 Identities = 55/191 (28%), Positives = 87/191 (45%), Gaps = 9/191 (4%)
Query: 46  SGKVVIITGASSGIGEHLAYEYXXXXXXXXXXXXXEKSLEEVADTAREIGSPD-VITIRA 104
           S KV ++TGASSG G  +A                 ++L+++         PD    I  
Sbjct: 4   SAKVWLVTGASSGFGRAIAEAAVAAGDTVIGTARRTEALDDLV-----AAYPDRAEAISL 58
Query: 105 DVSKVDDCRSLVEETMNHFGRLDHLVNNAGISSVALFEDIVNITDFKQIMNINFWGSVYT 164
           DV+  +    +  + +  +GR+D LVNNAG + V  FE+     + + +  ++ +G    
Sbjct: 59  DVTDGERIDVVAADVLARYGRVDVLVNNAGRTQVGAFEETTE-RELRDLFELHVFGPARL 117
Query: 165 TRFAVPHLR-YTKGKIVVLSSAASWLTAPRMSFYNASKAALVLFFETLRVELGS-DVGVT 222
           TR  +P  R    G +V +SS    L+    S Y+A+KAAL    E L  E+    + V 
Sbjct: 118 TRALLPQXRERGSGSVVNISSFGGQLSFAGFSAYSATKAALEQLSEGLADEVAPFGIKVL 177
Query: 223 IVTPGFIESEL 233
           IV PG   + L
Sbjct: 178 IVEPGAFRTNL 188

>pdb|2PNF|A Chain A, Structure Of Aquifex Aeolicus Fabg 3-oxoacyl-(acyl-carrier Protein) Reductase Length = 248

Iteration: 1
 Score = 61.6 bits (148), Expect = 4e-10,   Method: Compositional matrix adjust.
 Identities = 50/193 (25%), Positives = 93/193 (48%), Gaps = 3/193 (1%)
Query: 44  DVSGKVVIITGASSGIGEHLAYEYXXXXXXXXXXXXXEKSLEEVADTAREIGSPDVITIR 103
            + GKV ++TG++ GIG  +A +               +  + VA+            + 
Sbjct: 4   KLQGKVSLVTGSTRGIGRAIAEKLASAGSTVIITGTSGERAKAVAEEIANKYGVKAHGVE 63
Query: 104 ADVSKVDDCRSLVEETMNHFGRLDHLVNNAGISSVALFEDIVNITDFKQIMNINFWGSVY 163
            ++   +      EE  N    +D LVNNAGI+   LF  + ++ D+++++ +N  G+  
Sbjct: 64  MNLLSEESINKAFEEIYNLVDGIDILVNNAGITRDKLFLRM-SLLDWEEVLKVNLTGTFL 122
Query: 164 TTRFAVPHL-RYTKGKIVVLSSAASWLTAPRMSFYNASKAALVLFFETLRVELGS-DVGV 221
            T+ ++  + +   G+IV +SS   +        Y+ +KA L+ F ++L  EL   +V V
Sbjct: 123 VTQNSLRKMIKQRWGRIVNISSVVGFTGNVGQVNYSTTKAGLIGFTKSLAKELAPRNVLV 182
Query: 222 TIVTPGFIESELT 234
             V PGFIE+++T
Sbjct: 183 NAVAPGFIETDMT 195

>pdb|3TZK|A Chain A, Crystal Structure Of 3-Ketoacyl-(Acyl-Carrier-Protein) Reductase (Fabg)(G92a) From Vibrio Cholerae Length = 251

Iteration: 1
 Score = 61.2 bits (147), Expect = 5e-10,   Method: Compositional matrix adjust.
 Identities = 50/195 (25%), Positives = 95/195 (48%), Gaps = 9/195 (4%)
Query: 44  DVSGKVVIITGASSGIGEHLAYEYXXXXXXXXXXXXXEKSLEEVADTAREIGSPDVITIR 103
           ++ GKV ++TGAS GIG+ +A                E   + ++D   + G    +   
Sbjct: 9   NLEGKVALVTGASRGIGKAIAELLAERGAKVIGTATSESGAQAISDYLGDNGKGMAL--- 65
Query: 104 ADVSKVDDCRSLVEETMNHFGRLDHLVNNAGISSVALFEDIVNITDFKQIMNINFWGSVY 163
            +V+  +   ++++   + FG +D LVNNA I+   L   +    ++  IM  N   S++
Sbjct: 66  -NVTNPESIEAVLKAITDEFGGVDILVNNAAITRDNLLMRMKE-EEWSDIMETNLT-SIF 122
Query: 164 TTRFAV--PHLRYTKGKIVVLSSAASWLTAPRMSFYNASKAALVLFFETLRVELGS-DVG 220
               AV    ++  +G+I+ + S    +     + Y A+KA ++ F +++  E+ S  V 
Sbjct: 123 RLSKAVLRGMMKKRQGRIINVGSVVGTMGNAGQANYAAAKAGVIGFTKSMAREVASRGVT 182
Query: 221 VTIVTPGFIESELTQ 235
           V  V PGFIE+++T+
Sbjct: 183 VNTVAPGFIETDMTK 197

>pdb|2B4Q|A Chain A, Pseudomonas Aeruginosa RhlgNADP ACTIVE-Site Complex Length = 276

Iteration: 1
 Score = 61.2 bits (147), Expect = 5e-10,   Method: Compositional matrix adjust.
 Identities = 54/199 (27%), Positives = 88/199 (44%), Gaps = 12/199 (6%)
Query: 45  VSGKVVIITGASSGIGEHLAYEYXXXXXXXXXXXXXEKSLEEVADTAREIGS-PDVITIR 103
           ++G++ ++TG S GIG+ +A                 +  E  ADTA  + +  D   I 
Sbjct: 27  LAGRIALVTGGSRGIGQMIAQGLLEAGARVFICA---RDAEACADTATRLSAYGDCQAIP 83
Query: 104 ADVSKVDDCRSLVEETMNHFGRLDHLVNNAGISSVALFEDIVNITDFKQIMNINFWGSVY 163
           AD+S     R L +       RLD LVNNAG S  A  E    ++ ++++M +N      
Sbjct: 84  ADLSSEAGARRLAQALGELSARLDILVNNAGTSWGAALES-YPVSGWEKVMQLNVTSVFS 142
Query: 164 TTRFAVPHLRYT-----KGKIVVLSSAASWLTAPRMSF-YNASKAALVLFFETLRVEL-G 216
             +  +P LR +       +++ + S A        ++ Y  SKAAL      L  EL G
Sbjct: 143 CIQQLLPLLRRSASAENPARVINIGSVAGISAMGEQAYAYGPSKAALHQLSRMLAKELVG 202
Query: 217 SDVGVTIVTPGFIESELTQ 235
             + V ++ PG   S +T+
Sbjct: 203 EHINVNVIAPGRFPSRMTR 221

>pdb|3O38|A Chain A, Crystal Structure Of A Short Chain Dehydrogenase From Mycobacterium Smegmatis Length = 266

Iteration: 1
 Score = 60.8 bits (146), Expect = 6e-10,   Method: Compositional matrix adjust.
 Identities = 49/175 (28%), Positives = 81/175 (46%), Gaps = 8/175 (4%)
Query: 45  VSGKVVIITGAS-SGIGEHLAYEYXXXXXXXXXXXXXEKSLEEVADTAREIGSPDVITIR 103
           + GKVV++T A+ +GIG   A                E+ L E  D   ++G   V  + 
Sbjct: 20  LKGKVVLVTAAAGTGIGSTTARRALLEGADVVISDYHERRLGETRDQLADLGLGRVEAVV 79
Query: 104 ADVSKVDDCRSLVEETMNHFGRLDHLVNNAGISSVALFEDIVNITD--FKQIMNINFWGS 161
            DV+  +   +L+ +T+   GRLD LVNNAG+        +V++TD  + +++N+     
Sbjct: 80  CDVTSTEAVDALITQTVEKAGRLDVLVNNAGLGGQT---PVVDMTDEEWDRVLNVTLTSV 136
Query: 162 VYTTRFAVPHLRYTK--GKIVVLSSAASWLTAPRMSFYNASKAALVLFFETLRVE 214
           +  TR A+ + R     G IV  +S   W      S Y A+KA ++       +E
Sbjct: 137 MRATRAALRYFRGVDHGGVIVNNASVLGWRAQHSQSHYAAAKAGVMALTRCSAIE 191

>pdb|3TZH|A Chain A, Crystal Structure Of 3-Ketoacyl-(Acyl-Carrier-Protein) Reductase (Fabg)(F187a) From Vibrio Cholerae Length = 251

Iteration: 1
 Score = 60.8 bits (146), Expect = 7e-10,   Method: Compositional matrix adjust.
 Identities = 50/195 (25%), Positives = 95/195 (48%), Gaps = 9/195 (4%)
Query: 44  DVSGKVVIITGASSGIGEHLAYEYXXXXXXXXXXXXXEKSLEEVADTAREIGSPDVITIR 103
           ++ GKV ++TGAS GIG+ +A                E   + ++D   + G    +   
Sbjct: 9   NLEGKVALVTGASRGIGKAIAELLAERGAKVIGTATSESGAQAISDYLGDNGKGMAL--- 65
Query: 104 ADVSKVDDCRSLVEETMNHFGRLDHLVNNAGISSVALFEDIVNITDFKQIMNINFWGSVY 163
            +V+  +   ++++   + FG +D LVNNAGI+   L   +    ++  IM  N   S++
Sbjct: 66  -NVTNPESIEAVLKAITDEFGGVDILVNNAGITRDNLLMRMKE-EEWSDIMETNLT-SIF 122
Query: 164 TTRFAV--PHLRYTKGKIVVLSSAASWLTAPRMSFYNASKAALVLFFETLRVELGS-DVG 220
               AV    ++  +G+I+ + S    +     + Y A+KA ++ F +++  E+ S  V 
Sbjct: 123 RLSKAVLRGMMKKRQGRIINVGSVVGTMGNAGQANYAAAKAGVIGFTKSMAREVASRGVT 182
Query: 221 VTIVTPGFIESELTQ 235
           V  V PG IE+++T+
Sbjct: 183 VNTVAPGAIETDMTK 197

>pdb|3U09|A Chain A, Crystal Structure Of 3-Ketoacyl-(Acyl-Carrier-Protein) Reductase (Fabg)(G92d) From Vibrio Cholerae Length = 251

Iteration: 1
 Score = 60.5 bits (145), Expect = 8e-10,   Method: Compositional matrix adjust.
 Identities = 50/195 (25%), Positives = 95/195 (48%), Gaps = 9/195 (4%)
Query: 44  DVSGKVVIITGASSGIGEHLAYEYXXXXXXXXXXXXXEKSLEEVADTAREIGSPDVITIR 103
           ++ GKV ++TGAS GIG+ +A                E   + ++D   + G    +   
Sbjct: 9   NLEGKVALVTGASRGIGKAIAELLAERGAKVIGTATSESGAQAISDYLGDNGKGMAL--- 65
Query: 104 ADVSKVDDCRSLVEETMNHFGRLDHLVNNAGISSVALFEDIVNITDFKQIMNINFWGSVY 163
            +V+  +   ++++   + FG +D LVNNA I+   L   +    ++  IM  N   S++
Sbjct: 66  -NVTNPESIEAVLKAITDEFGGVDILVNNADITRDNLLMRMKE-EEWSDIMETNLT-SIF 122
Query: 164 TTRFAV--PHLRYTKGKIVVLSSAASWLTAPRMSFYNASKAALVLFFETLRVELGS-DVG 220
               AV    ++  +G+I+ + S    +     + Y A+KA ++ F +++  E+ S  V 
Sbjct: 123 RLSKAVLRGMMKKRQGRIINVGSVVGTMGNAGQANYAAAKAGVIGFTKSMAREVASRGVT 182
Query: 221 VTIVTPGFIESELTQ 235
           V  V PGFIE+++T+
Sbjct: 183 VNTVAPGFIETDMTK 197

>pdb|2QQ5|A Chain A, Crystal Structure Of Human Sdr Family Member 1 Length = 260

Iteration: 1
 Score = 60.5 bits (145), Expect = 8e-10,   Method: Compositional matrix adjust.
 Identities = 61/210 (29%), Positives = 95/210 (45%), Gaps = 35/210 (16%)
Query: 45  VSGKVVIITGASSGIGEHLAYEYXXXXXXXXXXXXXEKSLEEVADTAREIGSPDVITIRA 104
           ++G+V ++TGAS GIG  +A +                +L  VA  A+ +G    + +  
Sbjct: 3   MNGQVCVVTGASRGIGRGIALQLCKAGATVYITGRHLDTLRVVAQEAQSLGG-QCVPVVC 61
Query: 105 DVSKVDDCRSLVEET-MNHFGRLDHLVNN--AGISSV-------------ALFEDIVNIT 148
           D S+  + RSL E+      GRLD LVNN  AG+ ++             ++++DI N+ 
Sbjct: 62  DSSQESEVRSLFEQVDREQQGRLDVLVNNAYAGVQTILNTRNKAFWETPASMWDDINNVG 121
Query: 149 DFKQIMNINFWGSVYTTRFAVPHLRYTKGKIVVLSSAAS---WLTAPRMSFYNASKAALV 205
                +  +++ SVY  R  VP     +G IVV+SS  S       P    Y   KAA  
Sbjct: 122 -----LRGHYFCSVYGARLMVP---AGQGLIVVISSPGSLQYMFNVP----YGVGKAACD 169
Query: 206 LFFETLRVELGSDVGVTIVT--PGFIESEL 233
                   EL    GV+ V+  PG +++EL
Sbjct: 170 KLAADCAHELRRH-GVSCVSLWPGIVQTEL 198

>pdb|3UWR|A Chain A, Crystal Structure Of Carveol Dehydrogenase From Mycobacterium Avium Strain 104 Length = 286

Iteration: 1
 Score = 60.1 bits (144), Expect = 1e-09,   Method: Compositional matrix adjust.
 Identities = 51/205 (24%), Positives = 88/205 (42%), Gaps = 37/205 (18%)
Query: 38  NSIFSEDVSGKVVIITGASSGIG-----------------------EHLAYEYXXXXXXX 74
            ++ +  V+GKV  I+GA+ G G                       E+LAY +       
Sbjct: 6   GAVMTGRVAGKVAFISGAARGQGRSHAVRLAQEGADIIAIDICGPIENLAYPHST----- 60
Query: 75  XXXXXXEKSLEEVADTAREIGSPDVITIRADVSKVDDCRSLVEETMNHFGRLDHLVNNAG 134
                  + L E AD  +++    ++T + DV   +  +S V+  +   GRLD +V NAG
Sbjct: 61  ------PEDLAETADLVKDLDR-RIVTAQVDVRDFEALKSAVDSGVEQLGRLDIIVANAG 113
Query: 135 ISSVALFEDIVNITDFKQIMNINFWGSVYTTRFAVPH-LRYTKGKIVVLSSAASWLTA-P 192
           + +       +    ++ +++IN  G  +T +  VPH L   +G  +VL+S+     A P
Sbjct: 114 VGTDGRKLHKIRDNVWQDMIDINLTGVWHTVKAGVPHVLSGGRGGSIVLTSSVGGRKAYP 173
Query: 193 RMSFYNASKAALVLFFETLRVELGS 217
               Y A+K  ++       VELG 
Sbjct: 174 NTGHYIAAKHGVIGLMRAFAVELGP 198

>pdb|2ET6|A Chain A, (3r)-Hydroxyacyl-Coa Dehydrogenase Domain Of Candida Tropicalis Peroxisomal Multifunctional Enzyme Type 2 Length = 604

Iteration: 1
 Score = 59.7 bits (143), Expect = 1e-09,   Method: Compositional matrix adjust.
 Identities = 53/181 (29%), Positives = 86/181 (47%), Gaps = 15/181 (8%)
Query: 44  DVSGKVVIITGASSGIGEHLAYEYXXXXX---------XXXXXXXXEKSLEEVADTAREI 94
           D   KVVIITGA  G+G++ + E+                       K+ + V D   + 
Sbjct: 5   DFKDKVVIITGAGGGLGKYYSLEFAKLGAKVVVNDLGGALNGQGGNSKAADVVVDEIVKN 64
Query: 95  GSPDVITIRADVSKVDDCRSLVEETMNHFGRLDHLVNNAGISSVALFEDIVNITDFKQIM 154
           G   V    AD + V D   +VE  + +FG +  ++NNAGI   A  + +    D+K ++
Sbjct: 65  GGVAV----ADYNNVLDGDKIVETAVKNFGTVHVIINNAGILRDASMKKMTE-KDYKLVI 119
Query: 155 NINFWGSVYTTRFAVPHLRYTK-GKIVVLSSAASWLTAPRMSFYNASKAALVLFFETLRV 213
           +++  G+   T+ A P+ +  K G+IV  SS A        + Y ++K+AL+ F ETL  
Sbjct: 120 DVHLNGAFAVTKAAWPYFQKQKYGRIVNTSSPAGLYGNFGQANYASAKSALLGFAETLAK 179
Query: 214 E 214
           E
Sbjct: 180 E 180

>pdb|3I3O|A Chain A, 2.06 Angstrom Resolution Crystal Structure Of A Short Chain Dehydrogenase From Bacillus Anthracis Str. 'ames Ancestor' In Complex With Nad-acetone Length = 291

Iteration: 1
 Score = 59.3 bits (142), Expect = 2e-09,   Method: Compositional matrix adjust.
 Identities = 49/199 (24%), Positives = 86/199 (43%), Gaps = 4/199 (2%)
Query: 42  SEDVSGKVVIITGASSGIGEHLAYEYXXXXXXXXXXXXXEKSLEEVADTAREIGSPDVIT 101
           SE + GK V+ITG  SGIG  ++  +             E+          E      + 
Sbjct: 42  SEKLKGKNVLITGGDSGIGRAVSIAFAKEGANIAIAYLDEEGDANETKQYVEKEGVKCVL 101
Query: 102 IRADVSKVDDCRSLVEETMNHFGRLDHLVNNAGISSVALFEDIVNITDFKQIMNINFWGS 161
           +  D+S    C+ +V+ET+   G L+ LVNN          + +     ++   IN +  
Sbjct: 102 LPGDLSDEQHCKDIVQETVRQLGSLNILVNNVAQQYPQQGLEYITAEQLEKTFRINIFSY 161
Query: 162 VYTTRFAVPHLRYTKGKIVV-LSSAASWLTAPRMSFYNASKAALVLFFETLRVEL-GSDV 219
            + T+ A+ HL+  +G +++  +S  ++     +  Y+A+K A+V F  +L   L    +
Sbjct: 162 FHVTKAALSHLK--QGDVIINTASIVAYEGNETLIDYSATKGAIVAFTRSLSQSLVQKGI 219
Query: 220 GVTIVTPGFIESELTQGKF 238
            V  V PG I + L    F
Sbjct: 220 RVNGVAPGPIWTPLIPSSF 238

>pdb|3ICC|A Chain A, Crystal Structure Of A Putative 3-Oxoacyl-(Acyl Carrier Protein) Reductase From Bacillus Anthracis At 1.87 A Resolution Length = 255

Iteration: 1
 Score = 59.3 bits (142), Expect = 2e-09,   Method: Compositional matrix adjust.
 Identities = 56/197 (28%), Positives = 92/197 (46%), Gaps = 13/197 (6%)
Query: 45  VSGKVVIITGASSGIGEHLAYEYXXXXXXXXXXXXXEKSLEEVADTAREIGS--PDVITI 102
           + GKV ++TGAS GIG  +A                 K  EE  +T  EI S      +I
Sbjct: 5   LKGKVALVTGASRGIGRAIAKRLANDGALVAIHYGNRK--EEAEETVYEIQSNGGSAFSI 62
Query: 103 RADVSKVDDCR----SLVEETMNHFG--RLDHLVNNAGISSVALFEDIVNITDFKQIMNI 156
            A++  +        SL  E  N  G  + D L+NNAGI   A  E+      F + +++
Sbjct: 63  GANLESLHGVEALYSSLDNELQNRTGSTKFDILINNAGIGPGAFIEETTE-QFFDRXVSV 121
Query: 157 NFWGSVYTTRFAVPHLRYTKGKIVVLSSAASWLTAPRMSFYNASKAALVLFFETLRVELG 216
           N     +  + A+  LR    +I+ +SSAA+ ++ P    Y+ +K A+     TL  +LG
Sbjct: 122 NAKAPFFIIQQALSRLR-DNSRIINISSAATRISLPDFIAYSXTKGAINTXTFTLAKQLG 180
Query: 217 S-DVGVTIVTPGFIESE 232
           +  + V  + PGF++++
Sbjct: 181 ARGITVNAILPGFVKTD 197

>pdb|3VTZ|A Chain A, Structure Of Thermoplasma Volcanium Aldohexose Dehydrogenase Length = 269

Iteration: 1
 Score = 59.3 bits (142), Expect = 2e-09,   Method: Compositional matrix adjust.
 Identities = 53/207 (25%), Positives = 92/207 (44%), Gaps = 15/207 (7%)
Query: 43  EDVSGKVVIITGASSGIGEHLAYEYXXXXXXXXXXXXXEKSLEEVADTAREIGSPDVITI 102
           E+ + KV I+TG SSGIG  +                 EKS   V+D             
Sbjct: 10  EEFTDKVAIVTGGSSGIGLAVVDALVRYGAKVVSVSLDEKSDVNVSDH-----------F 58
Query: 103 RADVSKVDDCRSLVEETMNHFGRLDHLVNNAGISSVALFEDIVNITDFKQIMNINFWGSV 162
           + DV+  ++ +  VE+T   +GR+D LVNNAGI   +    +     +++I+++N  GS 
Sbjct: 59  KIDVTNEEEVKEAVEKTTKKYGRIDILVNNAGIEQYSPLH-LTPTEIWRRIIDVNVNGSY 117
Query: 163 YTTRFAVP-HLRYTKGKIVVLSSAASWLTAPRMSFYNASKAALVLFFETLRVELGSDVGV 221
              ++ +P  L    G I+ ++S  S+      + Y  SK AL+    ++ ++    +  
Sbjct: 118 LMAKYTIPVMLAIGHGSIINIASVQSYAATKNAAAYVTSKHALLGLTRSVAIDYAPKIRC 177
Query: 222 TIVTPGFIESELT--QGKFLTGRRQNS 246
             V PG I + +     K   G  +N+
Sbjct: 178 NAVCPGTIMTPMVIKAAKMEVGEDENA 204

>pdb|3IJR|A Chain A, 2.05 Angstrom Resolution Crystal Structure Of A Short Chain Dehydrogenase From Bacillus Anthracis Str. 'ames Ancestor' In Complex With Nad+ Length = 291

Iteration: 1
 Score = 59.3 bits (142), Expect = 2e-09,   Method: Compositional matrix adjust.
 Identities = 49/199 (24%), Positives = 86/199 (43%), Gaps = 4/199 (2%)
Query: 42  SEDVSGKVVIITGASSGIGEHLAYEYXXXXXXXXXXXXXEKSLEEVADTAREIGSPDVIT 101
           SE + GK V+ITG  SGIG  ++  +             E+          E      + 
Sbjct: 42  SEKLKGKNVLITGGDSGIGRAVSIAFAKEGANIAIAYLDEEGDANETKQYVEKEGVKCVL 101
Query: 102 IRADVSKVDDCRSLVEETMNHFGRLDHLVNNAGISSVALFEDIVNITDFKQIMNINFWGS 161
           +  D+S    C+ +V+ET+   G L+ LVNN          + +     ++   IN +  
Sbjct: 102 LPGDLSDEQHCKDIVQETVRQLGSLNILVNNVAQQYPQQGLEYITAEQLEKTFRINIFSY 161
Query: 162 VYTTRFAVPHLRYTKGKIVV-LSSAASWLTAPRMSFYNASKAALVLFFETLRVEL-GSDV 219
            + T+ A+ HL+  +G +++  +S  ++     +  Y+A+K A+V F  +L   L    +
Sbjct: 162 FHVTKAALSHLK--QGDVIINTASIVAYEGNETLIDYSATKGAIVAFTRSLSQSLVQKGI 219
Query: 220 GVTIVTPGFIESELTQGKF 238
            V  V PG I + L    F
Sbjct: 220 RVNGVAPGPIWTPLIPSSF 238

>pdb|2Q2Q|A Chain A, Structure Of D-3-Hydroxybutyrate Dehydrogenase From Pseudomonas Putida Length = 255

Iteration: 1
 Score = 59.3 bits (142), Expect = 2e-09,   Method: Compositional matrix adjust.
 Identities = 51/193 (26%), Positives = 90/193 (46%), Gaps = 6/193 (3%)
Query: 45  VSGKVVIITGASSGIGEHLAYEYXXXXXXXXXXXXXEKSLEEVADTAREIGSPDVITIRA 104
           + GK  ++TG++SGIG  +A                + +   +A+ AR       +   A
Sbjct: 2   LKGKTALVTGSTSGIGLGIAQVLARAGANIVLNGFGDPA-PALAEIARH--GVKAVHHPA 58
Query: 105 DVSKVDDCRSLVEETMNHFGRLDHLVNNAGISSVALFEDIVNITDFKQIMNINFWGSVYT 164
           D+S V    +L       FG +D LVNNAGI  VA  E    +  + +I+ +N     + 
Sbjct: 59  DLSDVAQIEALFALAEREFGGVDILVNNAGIQHVAPVEQF-PLESWDKIIALNLSAVFHG 117
Query: 165 TRFAVPHLRYTK-GKIVVLSSAASWLTAPRMSFYNASKAALVLFFETLRVELG-SDVGVT 222
           TR A+P +R    G+I+ ++S    + +   + Y A+K  +V   + + +E   S+V   
Sbjct: 118 TRLALPGMRARNWGRIINIASVHGLVGSTGKAAYVAAKHGVVGLTKVVGLETATSNVTCN 177
Query: 223 IVTPGFIESELTQ 235
            + PG++ + L Q
Sbjct: 178 AICPGWVLTPLVQ 190

>pdb|3ASU|A Chain A, Crystal Structure Of Serine Dehydrogenase From Escherichia Coli Length = 248

Iteration: 1
 Score = 58.9 bits (141), Expect = 2e-09,   Method: Compositional matrix adjust.
 Identities = 50/184 (27%), Positives = 90/184 (48%), Gaps = 8/184 (4%)
Query: 49  VVIITGASSGIGEHLAYEYXXXXXXXXXXXXXEKSLEEVADTAREIGSPDVITIRADVSK 108
           +V++TGA++G GE +   +             ++ L+E+ D   E+G  ++   + DV  
Sbjct: 2   IVLVTGATAGFGECITRRFIQQGHKVIATGRRQERLQELKD---ELGD-NLYIAQLDVRN 57
Query: 109 VDDCRSLVEETMNHFGRLDHLVNNAGISSVALFEDIVNITDFKQIMNINFWGSVYTTRFA 168
                 ++      +  +D LVNNAG++         ++ D++ +++ N  G VY TR  
Sbjct: 58  RAAIEEMLASLPAEWCNIDILVNNAGLALGMEPAHKASVEDWETMIDTNNKGLVYMTRAV 117
Query: 169 VPHL-RYTKGKIV-VLSSAASWLTAPRMSFYNASKAALVLFFETLRVEL-GSDVGVTIVT 225
           +P +     G I+ + S+A SW  A   + Y A+KA +  F   LR +L G+ V VT + 
Sbjct: 118 LPGMVERNHGHIINIGSTAGSWPYAGG-NVYGATKAFVRQFSLNLRTDLHGTAVRVTDIE 176
Query: 226 PGFI 229
           PG +
Sbjct: 177 PGLV 180

>pdb|2CF2|E Chain E, Architecture Of Mammalian Fatty Acid Synthase Length = 226

Iteration: 1
 Score = 58.5 bits (140), Expect = 3e-09,   Method: Compositional matrix adjust.
 Identities = 53/192 (27%), Positives = 89/192 (46%), Gaps = 18/192 (9%)
Query: 47  GKVVIITGASSGIGEHLAYEYXXXXXXXXXXXXXEKSLEEVADTAREIGSPDVITIRADV 106
           GK+ ++TGAS GIG  +A                E   + ++D     G   ++    +V
Sbjct: 5   GKIALVTGASRGIGRAIAETLAARGAKVIGTATSENGAQAISDYLGANGKGLML----NV 60
Query: 107 SKVDDCRSLVEETMNHFGRLDHLVNNAGISSVALFEDIVNITDFKQIMNINFWGSVYTTR 166
           +      S++E+    FG +D LVNNAGI+   L   + +  ++  I+  N   SV+   
Sbjct: 61  TDPASIESVLEKIRAEFGEVDILVNNAGITRDNLLMRMKD-EEWNDIIETNLS-SVFRLS 118
Query: 167 FAV--PHLRYTKGKIVVLSSAASWLTAPRMSFYNASKAALVLFFETLRVELGS-DVGVTI 223
            AV    ++   G+I+ +   A+         Y A+KA L+ F ++L  E+ S  + V +
Sbjct: 119 KAVMRAMMKKRHGRIITIGGQAN---------YAAAKAGLIGFSKSLAREVASRGITVNV 169
Query: 224 VTPGFIESELTQ 235
           V PGFIE+   Q
Sbjct: 170 VAPGFIETSDDQ 181

>pdb|2A4K|A Chain A, 3-Oxoacyl-[acyl Carrier Protein] Reductase From Thermus Thermophilus Tt0137 Length = 263

Iteration: 1
 Score = 58.2 bits (139), Expect = 4e-09,   Method: Compositional matrix adjust.
 Identities = 53/193 (27%), Positives = 90/193 (46%), Gaps = 8/193 (4%)
Query: 45  VSGKVVIITGASSGIGEHLAYEYXXXXXXXXXXXXXEKSLEEVADTAREIGSPDVITIRA 104
           +SGK +++TGA+SGIG      +             E+ L E            V    A
Sbjct: 4   LSGKTILVTGAASGIGRAALDLFAREGASLVAVDREERLLAEAVAALEAEAIAVV----A 59
Query: 105 DVSKVDDCRSLVEETMNHFGRLDHLVNNAGISSVALFEDIVNITDFKQIMNINFWGSVYT 164
           DVS      ++  E +  FGRL  + + AG++  AL  ++  +  +++++ +N  GS   
Sbjct: 60  DVSDPKAVEAVFAEALEEFGRLHGVAHFAGVAHSALSWNL-PLEAWEKVLRVNLTGSFLV 118
Query: 165 TRFAVPHLRYTKGKIVVLSSAASWLTAPRMSFYNASKAALVLFFETLRVELG-SDVGVTI 223
            R A   L   +G  +VL+ + + L A  ++ Y A K  +V    TL +EL    V V +
Sbjct: 119 ARKAGEVLE--EGGSLVLTGSVAGLGAFGLAHYAAGKLGVVGLARTLALELARKGVRVNV 176
Query: 224 VTPGFIESELTQG 236
           + PG I++ +T G
Sbjct: 177 LLPGLIQTPMTAG 189

>pdb|4E3Z|A Chain A, Crystal Structure Of A Oxidoreductase From Rhizobium Etli Cfn 42 Length = 272

Iteration: 1
 Score = 58.2 bits (139), Expect = 4e-09,   Method: Compositional matrix adjust.
 Identities = 57/201 (28%), Positives = 83/201 (41%), Gaps = 6/201 (2%)
Query: 48  KVVIITGASSGIGEHLAYEYXXXXXXXXXXXXXEKSLEEVADTAREIGSPDVITIRADVS 107
            VV++TG S GIG  +                  +   +    A      + + I  DV 
Sbjct: 27  PVVLVTGGSRGIGAAVCRLAARQGWRVGVNYAANREAADAVVAAITESGGEAVAIPGDVG 86
Query: 108 KVDDCRSLVEETMNHFGRLDHLVNNAGISSVALFEDIVNITDFKQIMNINFWGSVYTTRF 167
              D  +        FGRLD LVNNAGI       D  ++   ++ + +N  GS+     
Sbjct: 87  NAADIAAXFSAVDRQFGRLDGLVNNAGIVDYPQRVDEXSVERIERXLRVNVTGSILCAAE 146
Query: 168 AVPHLRY----TKGKIVVLSSAASWL-TAPRMSFYNASKAALVLFFETLRVELGSD-VGV 221
           AV           G IV +SS A+ L +A +   Y ASKAA+  F   L  E+ ++ + V
Sbjct: 147 AVRRXSRLYSGQGGAIVNVSSXAAILGSATQYVDYAASKAAIDTFTIGLAREVAAEGIRV 206
Query: 222 TIVTPGFIESELTQGKFLTGR 242
             V PG IE++L     L  R
Sbjct: 207 NAVRPGIIETDLHASGGLPDR 227

>pdb|1K2W|A Chain A, Crystal Structure Of Sorbitol Dehydrogenase From R. Sphaeroides Length = 256

Iteration: 1
 Score = 58.2 bits (139), Expect = 4e-09,   Method: Compositional matrix adjust.
 Identities = 58/201 (28%), Positives = 91/201 (45%), Gaps = 20/201 (9%)
Query: 45  VSGKVVIITGASSGIGEHLAYEYXXXXXXXXXXXXXEKSLEEVADTAREIGSPDVITIRA 104
           + GK  +ITG++ GIG   A  Y             + +LE    TA EIG P    I  
Sbjct: 3   LDGKTALITGSARGIGRAFAEAYVREGARVAIA---DINLEAARATAAEIG-PAACAIAL 58
Query: 105 DVSKVDDCRSLVEETMNHFGRLDHLVNNAGISSVALFE--DIVNIT--DFKQIMNINFWG 160
           DV+        V E ++ +G +D LVNNA     ALF+   IV IT   + ++  IN  G
Sbjct: 59  DVTDQASIDRCVAELLDRWGSIDILVNNA-----ALFDLAPIVEITRESYDRLFAINVSG 113
Query: 161 SVY----TTRFAVPHLRYTKGKIVVLSSAASWLTAPRMSFYNASKAALVLFFETLRVEL- 215
           +++      R  +   R   GKI+ ++S A       +  Y A+KAA++   ++  + L 
Sbjct: 114 TLFMMQAVARAMIAGGR--GGKIINMASQAGRRGEALVGVYCATKAAVISLTQSAGLNLI 171
Query: 216 GSDVGVTIVTPGFIESELTQG 236
              + V  + PG ++ E   G
Sbjct: 172 RHGINVNAIAPGVVDGEHWDG 192

>pdb|2FWM|X Chain X, Crystal Structure Of E. Coli Enta, A 2,3-Dihydrodihydroxy Benzoate Dehydrogenase Length = 250

Iteration: 1
 Score = 57.4 bits (137), Expect = 7e-09,   Method: Compositional matrix adjust.
 Identities = 61/193 (31%), Positives = 92/193 (47%), Gaps = 16/193 (8%)
Query: 44  DVSGKVVIITGASSGIGEHLAYEYXXXXXXXXXXXXXEKSLEEVADTAREIGSPDVITIR 103
           D SGK V +TGA  GIG   A  +             +   +E    A E+   DV    
Sbjct: 4   DFSGKNVWVTGAGKGIGYATALAFVEAGAKVTGFD--QAFTQEQYPFATEV--MDV---- 55
Query: 104 ADVSKVDD-CRSLVEETMNHFGRLDHLVNNAGISSVALFEDIVNITDFKQIMNINFWGSV 162
           AD ++V   C+ L+ ET     RLD LVN AGI  +    D ++  D++Q   +N  G+ 
Sbjct: 56  ADAAQVAQVCQRLLAETE----RLDALVNAAGILRMGA-TDQLSKEDWQQTFAVNVGGAF 110
Query: 163 YTTRFAVPHLRYTKG-KIVVLSSAASWLTAPRMSFYNASKAALVLFFETLRVEL-GSDVG 220
              +  +   R  +G  IV ++S A+      MS Y ASKAAL     ++ +EL GS V 
Sbjct: 111 NLFQQTMNQFRRQRGGAIVTVASDAAHTPRIGMSAYGASKAALKSLALSVGLELAGSGVR 170
Query: 221 VTIVTPGFIESEL 233
             +V+PG  ++++
Sbjct: 171 CNVVSPGSTDTDM 183

>pdb|1HXH|A Chain A, Comamonas Testosteroni 3beta17BETA HYDROXYSTEROID Dehydrogenase Length = 253

Iteration: 1
 Score = 57.4 bits (137), Expect = 7e-09,   Method: Compositional matrix adjust.
 Identities = 44/160 (27%), Positives = 76/160 (47%), Gaps = 5/160 (3%)
Query: 45  VSGKVVIITGASSGIGEHLAYEYXXXXXXXXXXXXXEKSLEEVADTAREIGSPDVITIRA 104
           + GKV ++TG +SG+G  +                 E + +++A    E+G   +  +R 
Sbjct: 4   LQGKVALVTGGASGVGLEVVKLLLGEGAKVAFSDINEAAGQQLAA---ELGERSMF-VRH 59
Query: 105 DVSKVDDCRSLVEETMNHFGRLDHLVNNAGISSVALFEDIVNITDFKQIMNINFWGSVYT 164
           DVS   D   ++       G L+ LVNNAGI      E    + DF +++ IN       
Sbjct: 60  DVSSEADWTLVMAAVQRRLGTLNVLVNNAGILLPGDME-TGRLEDFSRLLKINTESVFIG 118
Query: 165 TRFAVPHLRYTKGKIVVLSSAASWLTAPRMSFYNASKAAL 204
            +  +  ++ T G I+ ++S +SWL   + + Y+ASKAA+
Sbjct: 119 CQQGIAAMKETGGSIINMASVSSWLPIEQYAGYSASKAAV 158

>pdb|3CTM|A Chain A, Crystal Structure Of A Carbonyl Reductase From Candida Parapsilosis With Anti-Prelog Stereo-Specificity Length = 279

Iteration: 1
 Score = 57.0 bits (136), Expect = 9e-09,   Method: Compositional matrix adjust.
 Identities = 50/198 (25%), Positives = 94/198 (47%), Gaps = 13/198 (6%)
Query: 45  VSGKVVIITGASSGIGEHLAYEYXXXXXXXXXXXXXEKSLEEVADTAREIGSPDVITIRA 104
           + GKV  +TG+S GIG  +A  Y               + E+     +  G    +  +A
Sbjct: 32  LKGKVASVTGSSGGIGWAVAEAYAQAGADVAIWYNSHPADEKAEHLQKTYG----VHSKA 87
Query: 105 DVSKVDDCRSLVEETMNH----FGRLDHLVNNAGISSVALFE-DIVNITDFKQIMNINFW 159
               + D +S VEET++     FG +D  V NAG++     E D+ N   + +I++++  
Sbjct: 88  YKCNISDPKS-VEETISQQEKDFGTIDVFVANAGVTWTQGPEIDVDNYDSWNKIISVDLN 146
Query: 160 GSVYTTR-FAVPHLRYTKGKIVVLSS-AASWLTAPRM-SFYNASKAALVLFFETLRVELG 216
           G  Y +        +  KG +++ SS +   +  P++ + YN +KAA     ++L +E  
Sbjct: 147 GVYYCSHNIGKIFKKNGKGSLIITSSISGKIVNIPQLQAPYNTAKAACTHLAKSLAIEWA 206
Query: 217 SDVGVTIVTPGFIESELT 234
               V  ++PG+I++++T
Sbjct: 207 PFARVNTISPGYIDTDIT 224

>pdb|1XG5|A Chain A, Structure Of Human Putative Dehydrogenase Mgc4172 In Complex With Nadp Length = 279

Iteration: 1
 Score = 57.0 bits (136), Expect = 9e-09,   Method: Compositional matrix adjust.
 Identities = 49/197 (24%), Positives = 89/197 (45%), Gaps = 16/197 (8%)
Query: 48  KVVIITGASSGIGEHLAYEYXXXXXXXXXXXXXEKSLEEVADTAREIGSPD-VITIRADV 106
           ++ ++TGAS GIG  +A                  ++EE+A   +  G P  +I  R D+
Sbjct: 33  RLALVTGASGGIGAAVARALVQQGLKVVGCARTVGNIEELAAECKSAGYPGTLIPYRCDL 92
Query: 107 SKVDDCRSLVEETMNHFGRLDHLVNNAGISSVALFEDIV---NITDFKQIMNINFWGSVY 163
           S  +D  S+     +    +D  +NNAG++      D +   + + +K + N+N      
Sbjct: 93  SNEEDILSMFSAIRSQHSGVDICINNAGLAR----PDTLLSGSTSGWKDMFNVNVLALSI 148
Query: 164 TTRFAVPHLRYTK---GKIVVLSSAASWLTAPR--MSFYNASKAALVLFFETLRVEL--- 215
            TR A   ++      G I+ ++S +     P     FY+A+K A+    E LR EL   
Sbjct: 149 CTREAYQSMKERNVDDGHIININSMSGHRVLPLSVTHFYSATKYAVTALTEGLRQELREA 208
Query: 216 GSDVGVTIVTPGFIESE 232
            + +  T ++PG +E++
Sbjct: 209 QTHIRATCISPGVVETQ 225

>pdb|1AHI|A Chain A, 7 Alpha-Hydroxysteroid Dehydrogenase Complexed With Nadh And 7-Oxo Glycochenodeoxycholic Acid Length = 255

Iteration: 1
 Score = 57.0 bits (136), Expect = 1e-08,   Method: Compositional matrix adjust.
 Identities = 33/145 (22%), Positives = 67/145 (46%), Gaps = 6/145 (4%)
Query: 40  IFSED---VSGKVVIITGASSGIGEHLAYEYXXXXXXXXXXXXXEKSLEEVADTAREIGS 96
           +F+ D   + GK  IITGA +GIG+ +A  +               +   V D  +++G 
Sbjct: 1   MFNSDNLRLDGKCAIITGAGAGIGKEIAITFATAGASVVVSDINADAANHVVDEIQQLGG 60
Query: 97  PDVITIRADVSKVDDCRSLVEETMNHFGRLDHLVNNAGISSVALFEDIVNITDFKQIMNI 156
                 R D++   +  +L +  ++  G++D LVNNAG      F+  + + DF++   +
Sbjct: 61  -QAFACRCDITSEQELSALADFAISKLGKVDILVNNAGGGGPKPFD--MPMADFRRAYEL 117
Query: 157 NFWGSVYTTRFAVPHLRYTKGKIVV 181
           N +   + ++   P +    G +++
Sbjct: 118 NVFSFFHLSQLVAPEMEKNGGGVIL 142

>pdb|4FGS|A Chain A, Crystal Structure Of A Probable Dehydrogenase Protein Length = 273

Iteration: 1
 Score = 56.6 bits (135), Expect = 1e-08,   Method: Compositional matrix adjust.
 Identities = 60/195 (30%), Positives = 94/195 (48%), Gaps = 15/195 (7%)
Query: 42  SEDVSGKVVIITGASSGIGEHLAYEYXXXXXXXXXXXXXEKSLEEVADTA-REIGSPDVI 100
           ++ ++ K+ +ITGA+SGIG   A  +                 ++V D A  EIG    +
Sbjct: 24  TQRLNAKIAVITGATSGIGLAAAKRFVAEGARVFITGRR----KDVLDAAIAEIGG-GAV 78
Query: 101 TIRADVSKVDDCRSLVEETMNHFGRLDHL-VNNAGISSVALFEDIVNITDFKQIMNINFW 159
            I+AD + + +   L E+     GR+D L VN  G S + L E  V    +    + N  
Sbjct: 79  GIQADSANLAELDRLYEKVKAEAGRIDVLFVNAGGGSXLPLGE--VTEEQYDDTFDRNVK 136
Query: 160 GSVYTTRFAVPHLRYTKGKIVVLSSAASWLTA-PRMSFYNASKAALVLFFETLRVELGSD 218
           G ++T + A+P L   +G  VVL+ + +  T  P  S Y ASKAAL  F     ++L  D
Sbjct: 137 GVLFTVQKALPLL--ARGSSVVLTGSTAGSTGTPAFSVYAASKAALRSFARNWILDL-KD 193
Query: 219 VGVTI--VTPGFIES 231
            G+ I  ++PG  E+
Sbjct: 194 RGIRINTLSPGPTET 208

>pdb|2EHD|A Chain A, Crystal Structure Analysis Of Oxidoreductase Length = 234

Iteration: 1
 Score = 56.2 bits (134), Expect = 2e-08,   Method: Compositional matrix adjust.
 Identities = 53/185 (28%), Positives = 81/185 (43%), Gaps = 8/185 (4%)
Query: 49  VVIITGASSGIGEHLAYEYXXXXXXXXXXXXXEKSLEEVADTAREIGSPDVITIRADVSK 108
            V+ITGAS GIGE  A                EK L+ +A           + +  DV +
Sbjct: 7   AVLITGASRGIGEATARLLHAKGYRVGLMARDEKRLQALAAELE-----GALPLPGDVRE 61
Query: 109 VDDCRSLVEETMNHFGRLDHLVNNAGISSVALFEDIVNITDFKQIMNINFWGSVYTTRFA 168
             D    V      FG L  LVNNAG+  +    ++  + +++ +++ N  G+    R A
Sbjct: 62  EGDWARAVAAMEEAFGELSALVNNAGVGVMKPVHEL-TLEEWRLVLDTNLTGAFLGIRHA 120
Query: 169 VPH-LRYTKGKIVVLSSAASWLTAPRMSFYNASKAALVLFFETLRVEL-GSDVGVTIVTP 226
           VP  LR   G IV + S A        + YNASK  L+       ++L  ++V V  V P
Sbjct: 121 VPALLRRGGGTIVNVGSLAGKNPFKGGAAYNASKFGLLGLAGAAMLDLREANVRVVNVLP 180
Query: 227 GFIES 231
           G +++
Sbjct: 181 GSVDT 185

>pdb|2D1Y|A Chain A, Crystal Structure Of Tt0321 From Thermus Thermophilus Hb8 Length = 256

Iteration: 1
 Score = 56.2 bits (134), Expect = 2e-08,   Method: Compositional matrix adjust.
 Identities = 51/191 (26%), Positives = 87/191 (45%), Gaps = 14/191 (7%)
Query: 46  SGKVVIITGASSGIGEHLAYEYXXXXXXXXXXXXXEKSLEEVADTAREIGSPDVITIRAD 105
           +GK V++TG + GIG  +A  +              +  +EVA+    IG       + D
Sbjct: 5   AGKGVLVTGGARGIGRAIAQAFAREGALVALCDLRPEG-KEVAEA---IGG---AFFQVD 57
Query: 106 VSKVDDCRSLVEETMNHFGRLDHLVNNAGISSV--ALFEDIVNITDFKQIMNINFWGSVY 163
           +    +    VEE     GR+D LVNNA I++   AL    V + ++++++ +N    ++
Sbjct: 58  LEDERERVRFVEEAAYALGRVDVLVNNAAIAAPGSAL---TVRLPEWRRVLEVNLTAPMH 114
Query: 164 TTRFAVPHLRYTKGKIVV-LSSAASWLTAPRMSFYNASKAALVLFFETLRVELGS-DVGV 221
            +  A   +R   G  +V ++S          + YNASK  LV    +L ++L    + V
Sbjct: 115 LSALAAREMRKVGGGAIVNVASVQGLFAEQENAAYNASKGGLVNLTRSLALDLAPLRIRV 174
Query: 222 TIVTPGFIESE 232
             V PG I +E
Sbjct: 175 NAVAPGAIATE 185

>pdb|3OP4|A Chain A, Crystal Structure Of Putative 3-Ketoacyl-(Acyl-Carrier-Protein) Reductase From Vibrio Cholerae O1 Biovar Eltor Str. N16961 In Complex With Nadp+ Length = 248

Iteration: 1
 Score = 55.8 bits (133), Expect = 2e-08,   Method: Compositional matrix adjust.
 Identities = 50/195 (25%), Positives = 90/195 (46%), Gaps = 9/195 (4%)
Query: 44  DVSGKVVIITGASSGIGEHLAYEYXXXXXXXXXXXXXEKSLEEVADTAREIGSPDVITIR 103
           ++ GKV ++TGAS GIG+ +A                E   + ++D   + G    +   
Sbjct: 6   NLEGKVALVTGASRGIGKAIAELLAERGAKVIGTATSESGAQAISDYLGDNGKGXAL--- 62
Query: 104 ADVSKVDDCRSLVEETMNHFGRLDHLVNNAGISSVALFEDIVNITDFKQIMNINFWGSVY 163
            +V+  +   ++++   + FG +D LVNNAGI+   L        ++  I   N   S++
Sbjct: 63  -NVTNPESIEAVLKAITDEFGGVDILVNNAGITRDNLLXRXKE-EEWSDIXETNLT-SIF 119
Query: 164 TTRFAV--PHLRYTKGKIVVLSSAASWLTAPRMSFYNASKAALVLFFETLRVELGS-DVG 220
               AV     +  +G+I+ + S          + Y A+KA ++ F ++   E+ S  V 
Sbjct: 120 RLSKAVLRGXXKKRQGRIINVGSVVGTXGNAGQANYAAAKAGVIGFTKSXAREVASRGVT 179
Query: 221 VTIVTPGFIESELTQ 235
           V  V PGFIE++ T+
Sbjct: 180 VNTVAPGFIETDXTK 194

>pdb|3I4F|A Chain A, Structure Of Putative 3-oxoacyl-reductase From Bacillus Thuringiensis Length = 264

Iteration: 1
 Score = 55.8 bits (133), Expect = 2e-08,   Method: Compositional matrix adjust.
 Identities = 44/152 (28%), Positives = 78/152 (51%), Gaps = 15/152 (9%)
Query: 102 IRADVSKVDDCRSLVEETMNHFGRLDHLVNNAGISSVALFEDIVNIT--DFKQIMNINFW 159
           ++ADV+K +D   +VEE M+HFG++D L+NNAG   V   + +V+    ++ +++  N  
Sbjct: 62  VQADVTKKEDLHKIVEEAMSHFGKIDFLINNAG-PYVFERKKLVDYEEDEWNEMIQGNLT 120
Query: 160 GSVYTTRFAVPHLRYTK-GKIVVLS-----SAASWLTAPRMSFYNASKAALVLFFETLRV 213
              +  +  VP +R    G+I+        SA  W+     S + A+K  LV   +T+  
Sbjct: 121 AVFHLLKLVVPVMRKQNFGRIINYGFQGADSAPGWI---YRSAFAAAKVGLVSLTKTVAY 177
Query: 214 ELGSDVGVT--IVTPGFIESELTQGKFLTGRR 243
           E  ++ G+T  +V PG I  E+ +      R+
Sbjct: 178 E-EAEYGITANMVCPGDIIGEMKEATIQEARQ 208

>pdb|1ZBQ|A Chain A, Crystal Structure Of Human 17-beta-hydroxysteroid Dehydrogenase Type 4 In Complex With Nad Length = 327

Iteration: 1
 Score = 55.8 bits (133), Expect = 2e-08,   Method: Compositional matrix adjust.
 Identities = 55/200 (27%), Positives = 94/200 (47%), Gaps = 17/200 (8%)
Query: 47  GKVVIITGASSGIGEHLAYEYXXXXXXXXX-------XXXXEKSL--EEVADTAREIGSP 97
           G+VV++TGA +G+G   A  +                    + SL  ++V +  R  G  
Sbjct: 30  GRVVLVTGAGAGLGRAYALAFAERGALVVVNDLGGDFKGVGKGSLAADKVVEEIRRRGGK 89
Query: 98  DVITIRADVSKVDDCRSLVEETMNHFGRLDHLVNNAGISSVALFEDIVNITDFKQIMNIN 157
            V    A+   V++   +V+  ++ FGR+D +VNNAGI     F  I +  D+  I  ++
Sbjct: 90  AV----ANYDSVEEGEKVVKTALDAFGRIDVVVNNAGILRDRSFARISD-EDWDIIHRVH 144
Query: 158 FWGSVYTTRFAVPHLRYTK-GKIVVLSSAASWLTAPRMSFYNASKAALVLFFETLRVE-L 215
             GS   TR A  H++  K G+I++ SSA+        + Y+A+K  L+    +L +E  
Sbjct: 145 LRGSFQVTRAAWEHMKKQKYGRIIMTSSASGIYGNFGQANYSAAKLGLLGLANSLAIEGR 204
Query: 216 GSDVGVTIVTPGFIESELTQ 235
            S++    + P    S +TQ
Sbjct: 205 KSNIHCNTIAPN-AGSRMTQ 223

>pdb|4DC1|A Chain A, Crystal Structure Of Y202f Actinorhodin Polyketide Ketoreductase With Nadph Length = 281

Iteration: 1
 Score = 55.5 bits (132), Expect = 2e-08,   Method: Compositional matrix adjust.
 Identities = 54/192 (28%), Positives = 86/192 (44%), Gaps = 10/192 (5%)
Query: 48  KVVIITGASSGIGEHLAYEYXXXXXXXXXXXXXEKSLEEVADTAREIG-SPDVITIRADV 106
           +V ++TGA+SGIG  +A                E+ L       RE G   D  T   DV
Sbjct: 27  EVALVTGATSGIGLEIARRLGKEGLRVFVCARGEEGLRTTLKELREAGVEADGRT--CDV 84
Query: 107 SKVDDCRSLVEETMNHFGRLDHLVNNAGISSVALFEDIVNITDFKQIMNINFWGSVYTTR 166
             V +  +LV   +  +G +D LVNNAG        ++ +   +  ++  N  G    T+
Sbjct: 85  RSVPEIEALVAAVVERYGPVDVLVNNAGRPGGGATAELAD-ELWLDVVETNLTGVFRVTK 143
Query: 167 F---AVPHLRYTKGKIVVLSSAASWLTAPRMSFYNASKAALVLFFETLRVELGSDVGVTI 223
               A   L    G+IV ++S          + Y+ASK  +V F + L +EL +  G+T+
Sbjct: 144 QVLKAGGMLERGTGRIVNIASTGGKQGVVHAAPYSASKHGVVGFTKALGLEL-ARTGITV 202
Query: 224 --VTPGFIESEL 233
             V PGF+E+ +
Sbjct: 203 NAVCPGFVETPM 214

>pdb|3LYL|A Chain A, Structure Of 3-Oxoacyl-Acylcarrier Protein Reductase, Fabg From Francisella Tularensis Length = 247

Iteration: 1
 Score = 55.5 bits (132), Expect = 2e-08,   Method: Compositional matrix adjust.
 Identities = 53/200 (26%), Positives = 89/200 (44%), Gaps = 26/200 (13%)
Query: 48  KVVIITGASSGIGEHLAYEYXXXXXXXXXXXXXEKSLEEVADTAREIGSPDVITIRADVS 107
           KV ++TGAS GIG  +A+               + S E+  ++ +E G       R  V 
Sbjct: 6   KVALVTGASRGIGFEVAHALASKGATVVGTATSQASAEKFENSXKEKG----FKARGLVL 61
Query: 108 KVDDCRSLVEETMNHFGR-------LDHLVNNAGISSVALF----EDIVNITDFKQIMNI 156
            + D    +E   N F         +D LVNNAGI+   L     ED     +++ ++N 
Sbjct: 62  NISD----IESIQNFFAEIKAENLAIDILVNNAGITRDNLXXRXSED-----EWQSVINT 112
Query: 157 NFWGSVYTTRFAVPHLRYTK-GKIVVLSSAASWLTAPRMSFYNASKAALVLFFETLRVEL 215
           N       ++  V      + G+I+ + S       P  + Y A+KA ++ F ++L  E+
Sbjct: 113 NLSSIFRXSKECVRGXXKKRWGRIISIGSVVGSAGNPGQTNYCAAKAGVIGFSKSLAYEV 172
Query: 216 GS-DVGVTIVTPGFIESELT 234
            S ++ V +V PGFI ++ T
Sbjct: 173 ASRNITVNVVAPGFIATDXT 192

>pdb|1W4Z|A Chain A, Structure Of Actinorhodin Polyketide (Actiii) Reductase Length = 281

Iteration: 1
 Score = 55.5 bits (132), Expect = 3e-08,   Method: Compositional matrix adjust.
 Identities = 54/192 (28%), Positives = 86/192 (44%), Gaps = 10/192 (5%)
Query: 48  KVVIITGASSGIGEHLAYEYXXXXXXXXXXXXXEKSLEEVADTAREIG-SPDVITIRADV 106
           +V ++TGA+SGIG  +A                E+ L       RE G   D  T   DV
Sbjct: 27  EVALVTGATSGIGLEIARRLGKEGLRVFVCARGEEGLRTTLKELREAGVEADGRT--CDV 84
Query: 107 SKVDDCRSLVEETMNHFGRLDHLVNNAGISSVALFEDIVNITDFKQIMNINFWGSVYTTR 166
             V +  +LV   +  +G +D LVNNAG        ++ +   +  ++  N  G    T+
Sbjct: 85  RSVPEIEALVAAVVERYGPVDVLVNNAGRPGGGATAELAD-ELWLDVVETNLTGVFRVTK 143
Query: 167 F---AVPHLRYTKGKIVVLSSAASWLTAPRMSFYNASKAALVLFFETLRVELGSDVGVTI 223
               A   L    G+IV ++S          + Y+ASK  +V F + L +EL +  G+T+
Sbjct: 144 QVLKAGGMLERGTGRIVNIASTGGKQGVVHAAPYSASKHGVVGFTKALGLEL-ARTGITV 202
Query: 224 --VTPGFIESEL 233
             V PGF+E+ +
Sbjct: 203 NAVCPGFVETPM 214

>pdb|1X7G|A Chain A, Actinorhodin Polyketide Ketoreductase, Act Kr, With Nadp Bound Length = 261

Iteration: 1
 Score = 55.5 bits (132), Expect = 3e-08,   Method: Compositional matrix adjust.
 Identities = 54/192 (28%), Positives = 86/192 (44%), Gaps = 10/192 (5%)
Query: 48  KVVIITGASSGIGEHLAYEYXXXXXXXXXXXXXEKSLEEVADTAREIG-SPDVITIRADV 106
           +V ++TGA+SGIG  +A                E+ L       RE G   D  T   DV
Sbjct: 7   EVALVTGATSGIGLEIARRLGKEGLRVFVCARGEEGLRTTLKELREAGVEADGRTC--DV 64
Query: 107 SKVDDCRSLVEETMNHFGRLDHLVNNAGISSVALFEDIVNITDFKQIMNINFWGSVYTTR 166
             V +  +LV   +  +G +D LVNNAG        ++ +   +  ++  N  G    T+
Sbjct: 65  RSVPEIEALVAAVVERYGPVDVLVNNAGRPGGGATAELAD-ELWLDVVETNLTGVFRVTK 123
Query: 167 F---AVPHLRYTKGKIVVLSSAASWLTAPRMSFYNASKAALVLFFETLRVELGSDVGVTI 223
               A   L    G+IV ++S          + Y+ASK  +V F + L +EL +  G+T+
Sbjct: 124 QVLKAGGMLERGTGRIVNIASTGGKQGVVHAAPYSASKHGVVGFTKALGLEL-ARTGITV 182
Query: 224 --VTPGFIESEL 233
             V PGF+E+ +
Sbjct: 183 NAVCPGFVETPM 194

>pdb|2RH4|A Chain A, Actinorhodin Ketoreductase, Actkr, With Nadph And Inhibitor Emodin Length = 277

Iteration: 1
 Score = 55.5 bits (132), Expect = 3e-08,   Method: Compositional matrix adjust.
 Identities = 54/192 (28%), Positives = 86/192 (44%), Gaps = 10/192 (5%)
Query: 48  KVVIITGASSGIGEHLAYEYXXXXXXXXXXXXXEKSLEEVADTAREIG-SPDVITIRADV 106
           +V ++TGA+SGIG  +A                E+ L       RE G   D  T   DV
Sbjct: 23  EVALVTGATSGIGLEIARRLGKEGLRVFVCARGEEGLRTTLKELREAGVEADGRTC--DV 80
Query: 107 SKVDDCRSLVEETMNHFGRLDHLVNNAGISSVALFEDIVNITDFKQIMNINFWGSVYTTR 166
             V +  +LV   +  +G +D LVNNAG        ++ +   +  ++  N  G    T+
Sbjct: 81  RSVPEIEALVAAVVERYGPVDVLVNNAGRPGGGATAELAD-ELWLDVVETNLTGVFRVTK 139
Query: 167 F---AVPHLRYTKGKIVVLSSAASWLTAPRMSFYNASKAALVLFFETLRVELGSDVGVTI 223
               A   L    G+IV ++S          + Y+ASK  +V F + L +EL +  G+T+
Sbjct: 140 QVLKAGGMLERGTGRIVNIASTGGKQGVVHAAPYSASKHGVVGFTKALGLEL-ARTGITV 198
Query: 224 --VTPGFIESEL 233
             V PGF+E+ +
Sbjct: 199 NAVCPGFVETPM 210

>pdb|2NTN|A Chain A, Crystal Structure Of Maba-c60v/g139a/s144l Length = 267

Iteration: 1
 Score = 55.5 bits (132), Expect = 3e-08,   Method: Compositional matrix adjust.
 Identities = 50/194 (25%), Positives = 95/194 (48%), Gaps = 23/194 (11%)
Query: 48  KVVIITGASSGIGEHLAYEYXXXXXXXXXXXXXEKSLEEVADTAREIGSPD-VITIRADV 106
           + V++TG + GIG  +A                     +VA T R  G+P  +  +  DV
Sbjct: 36  RSVLVTGGNRGIGLAIAQRLAADG-------------HKVAVTHRGSGAPKGLFGVEVDV 82
Query: 107 S---KVDDCRSLVEETMNHFGRLDHLVNNAGISSVALFEDIVNITDFKQIMNINFWGSVY 163
           +    VD   + VEE   H G ++ LV+NAG+S+ A    +     F++++N N  G+  
Sbjct: 83  TDSDAVDRAFTAVEE---HQGPVEVLVSNAGLSADAFLMRMTE-EKFEKVINANLTGAFR 138
Query: 164 TTRFAVPHLRYTK-GKIVVLSSAASWLTAPRMSFYNASKAALVLFFETLRVELG-SDVGV 221
             + A   ++  K G+++ ++S +        + Y ASKA ++    ++  EL  ++V  
Sbjct: 139 VAQRASRSMQRNKFGRMIFIASVSGLWGIGNQANYAASKAGVIGMARSIARELSKANVTA 198
Query: 222 TIVTPGFIESELTQ 235
            +V PG+I++++T+
Sbjct: 199 NVVAPGYIDTDMTR 212

>pdb|1UZL|A Chain A, Maba From Mycobacterium Tuberculosis Length = 247

Iteration: 1
 Score = 55.5 bits (132), Expect = 3e-08,   Method: Compositional matrix adjust.
 Identities = 52/195 (26%), Positives = 97/195 (49%), Gaps = 25/195 (12%)
Query: 48  KVVIITGASSGIGEHLAYEYXXXXXXXXXXXXXEKSLEEVADTAREIGSPD-VITIRADV 106
           + V++TG + GIG  +A                     +VA T R  G+P  +  +  DV
Sbjct: 16  RSVLVTGGNRGIGLAIAQRLAADG-------------HKVAVTHRGSGAPKGLFGVECDV 62
Query: 107 S---KVDDCRSLVEETMNHFGRLDHLVNNAGISSVALFEDIVNITDFKQIMNINFWGSVY 163
           +    VD   + VEE   H G ++ LV+NAG+S+ A    +     F++++N N  G+  
Sbjct: 63  TDSDAVDRAFTAVEE---HQGPVEVLVSNAGLSADAFLMRMTE-EKFEKVINANLTGAFR 118
Query: 164 TTRFAVPHLRYTK-GKIVVLSS-AASWLTAPRMSFYNASKAALVLFFETLRVELG-SDVG 220
             + A   ++  K G+++ + S + SW    + + Y ASKA ++    ++  EL  ++V 
Sbjct: 119 VAQRASRSMQRNKFGRMIFIGSVSGSWGIGNQAN-YAASKAGVIGMARSIARELSKANVT 177
Query: 221 VTIVTPGFIESELTQ 235
             +V PG+I++++T+
Sbjct: 178 ANVVAPGYIDTDMTR 192

>pdb|3TOX|A Chain A, Crystal Structure Of A Short Chain Dehydrogenase In Complex With Nad(P) From Sinorhizobium Meliloti 1021 Length = 280

Iteration: 1
 Score = 55.5 bits (132), Expect = 3e-08,   Method: Compositional matrix adjust.
 Identities = 50/188 (26%), Positives = 81/188 (43%), Gaps = 8/188 (4%)
Query: 45  VSGKVVIITGASSGIGEHLAYEYXXXXXXXXXXXXXEKSLEEVADTAREIGSPDVITIRA 104
           + GK+ I+TGASSGIG   A  +               +L E+ D   EI          
Sbjct: 6   LEGKIAIVTGASSGIGRAAALLFAREGAKVVVTARNGNALAELTD---EIAGGGGEAAAL 62
Query: 105 DVSKVDDC--RSLVEETMNHFGRLDHLVNNAGISSVALFEDIVNITDFKQIMNINFWGSV 162
                D+    +LVE  +  FG LD   NNAG          +++  +++ ++ N   + 
Sbjct: 63  AGDVGDEALHEALVELAVRRFGGLDTAFNNAGALGAMGEISSLSVEGWRETLDTNLTSAF 122
Query: 163 YTTRFAVPHLRYTKGKIVVLSSAASWLTA--PRMSFYNASKAALVLFFETLRVELGS-DV 219
              ++ VP +    G  +  +S+    TA    ++ Y ASKA L+   + L VELG+  +
Sbjct: 123 LAAKYQVPAIAALGGGSLTFTSSFVGHTAGFAGVAPYAASKAGLIGLVQALAVELGARGI 182
Query: 220 GVTIVTPG 227
            V  + PG
Sbjct: 183 RVNALLPG 190

>pdb|4DBZ|A Chain A, Crystal Structure Of V151l Actinorhodin Polyketide Ketoreductase With Nadph Length = 281

Iteration: 1
 Score = 55.1 bits (131), Expect = 3e-08,   Method: Compositional matrix adjust.
 Identities = 54/192 (28%), Positives = 86/192 (44%), Gaps = 10/192 (5%)
Query: 48  KVVIITGASSGIGEHLAYEYXXXXXXXXXXXXXEKSLEEVADTAREIG-SPDVITIRADV 106
           +V ++TGA+SGIG  +A                E+ L       RE G   D  T   DV
Sbjct: 27  EVALVTGATSGIGLEIARRLGKEGLRVFVCARGEEGLRTTLKELREAGVEADGRT--CDV 84
Query: 107 SKVDDCRSLVEETMNHFGRLDHLVNNAGISSVALFEDIVNITDFKQIMNINFWGSVYTTR 166
             V +  +LV   +  +G +D LVNNAG        ++ +   +  ++  N  G    T+
Sbjct: 85  RSVPEIEALVAAVVERYGPVDVLVNNAGRPGGGATAELAD-ELWLDVVETNLTGVFRVTK 143
Query: 167 F---AVPHLRYTKGKIVVLSSAASWLTAPRMSFYNASKAALVLFFETLRVELGSDVGVTI 223
               A   L    G+IV ++S          + Y+ASK  +V F + L +EL +  G+T+
Sbjct: 144 QVLKAGGMLERGTGRIVNIASTGGKQGLVHAAPYSASKHGVVGFTKALGLEL-ARTGITV 202
Query: 224 --VTPGFIESEL 233
             V PGF+E+ +
Sbjct: 203 NAVCPGFVETPM 214

>pdb|1UZM|A Chain A, Maba From Mycobacterium Tuberculosis Length = 247

Iteration: 1
 Score = 55.1 bits (131), Expect = 4e-08,   Method: Compositional matrix adjust.
 Identities = 50/194 (25%), Positives = 94/194 (48%), Gaps = 23/194 (11%)
Query: 48  KVVIITGASSGIGEHLAYEYXXXXXXXXXXXXXEKSLEEVADTAREIGSPD-VITIRADV 106
           + V++TG + GIG  +A                     +VA T R  G+P  +  +  DV
Sbjct: 16  RSVLVTGGNRGIGLAIAQRLAADG-------------HKVAVTHRGSGAPKGLFGVEVDV 62
Query: 107 S---KVDDCRSLVEETMNHFGRLDHLVNNAGISSVALFEDIVNITDFKQIMNINFWGSVY 163
           +    VD   + VEE   H G ++ LV+NAG+S+ A    +     F++++N N  G+  
Sbjct: 63  TDSDAVDRAFTAVEE---HQGPVEVLVSNAGLSADAFLMRMTE-EKFEKVINANLTGAFR 118
Query: 164 TTRFAVPHLRYTK-GKIVVLSSAASWLTAPRMSFYNASKAALVLFFETLRVELG-SDVGV 221
             + A   ++  K G+++ + S +        + Y ASKA ++    ++  EL  ++V  
Sbjct: 119 VAQRASRSMQRNKFGRMIFIGSVSGLWGIGNQANYAASKAGVIGMARSIARELSKANVTA 178
Query: 222 TIVTPGFIESELTQ 235
            +V PG+I++++T+
Sbjct: 179 NVVAPGYIDTDMTR 192

>pdb|2YZ7|A Chain A, X-Ray Analyses Of 3-Hydroxybutyrate Dehydrogenase From Alcaligenes Faecalis Length = 260

Iteration: 1
 Score = 54.7 bits (130), Expect = 4e-08,   Method: Compositional matrix adjust.
 Identities = 47/194 (24%), Positives = 85/194 (43%), Gaps = 4/194 (2%)
Query: 45  VSGKVVIITGASSGIGEHLAYEYXXXXXXXXXXXXXE-KSLEEVADTAREIGSPDVITIR 103
           + GK  ++TG++SGIG  +A E              + + +E    T           + 
Sbjct: 2   LKGKKAVVTGSTSGIGLAMATELAKAGADVVINGFGQPEDIERERSTLESKFGVKAYYLN 61
Query: 104 ADVSKVDDCRSLVEETMNHFGRLDHLVNNAGISSVALFEDIVNITDFKQIMNINFWGSVY 163
           AD+S     R  + +     G LD LVNNAGI   A  E+   +  +  I+ +N     +
Sbjct: 62  ADLSDAQATRDFIAKAAEALGGLDILVNNAGIQHTAPIEEF-PVDKWNAIIALNLSAVFH 120
Query: 164 TTRFAVPHLRYTK-GKIVVLSSAASWLTAPRMSFYNASKAALVLFFETLRVE-LGSDVGV 221
            T  A+P ++    G+I+ ++SA   + +   S Y A+K  +V   +   +E  G  +  
Sbjct: 121 GTAAALPIMQKQGWGRIINIASAHGLVASVNKSAYVAAKHGVVGLTKVTALENAGKGITC 180
Query: 222 TIVTPGFIESELTQ 235
             + PG++ + L +
Sbjct: 181 NAICPGWVRTPLVE 194

>pdb|3CSD|B Chain B, Actinorhodin Polyketide Ketoreductase Mutant P94l Bound To Nadph And The Inhibitor Emodin Length = 281

Iteration: 1
 Score = 54.7 bits (130), Expect = 5e-08,   Method: Compositional matrix adjust.
 Identities = 54/192 (28%), Positives = 86/192 (44%), Gaps = 10/192 (5%)
Query: 48  KVVIITGASSGIGEHLAYEYXXXXXXXXXXXXXEKSLEEVADTAREIG-SPDVITIRADV 106
           +V ++TGA+SGIG  +A                E+ L       RE G   D  T   DV
Sbjct: 27  EVALVTGATSGIGLEIARRLGKEGLRVFVCARGEEGLRTTLKELREAGVEADGRT--CDV 84
Query: 107 SKVDDCRSLVEETMNHFGRLDHLVNNAGISSVALFEDIVNITDFKQIMNINFWGSVYTTR 166
             V +  +LV   +  +G +D LVNNAG        ++ +   +  ++  N  G    T+
Sbjct: 85  RSVPEIEALVAAVVERYGPVDVLVNNAGRLGGGATAELAD-ELWLDVVETNLTGVFRVTK 143
Query: 167 F---AVPHLRYTKGKIVVLSSAASWLTAPRMSFYNASKAALVLFFETLRVELGSDVGVTI 223
               A   L    G+IV ++S          + Y+ASK  +V F + L +EL +  G+T+
Sbjct: 144 QVLKAGGMLERGTGRIVNIASTGGKQGVVHAAPYSASKHGVVGFTKALGLEL-ARTGITV 202
Query: 224 --VTPGFIESEL 233
             V PGF+E+ +
Sbjct: 203 NAVCPGFVETPM 214

>pdb|2RHR|B Chain B, P94l Actinorhodin Ketordeuctase Mutant, With Nadph And Inhibitor Emodin Length = 277

Iteration: 1
 Score = 54.3 bits (129), Expect = 6e-08,   Method: Compositional matrix adjust.
 Identities = 54/192 (28%), Positives = 86/192 (44%), Gaps = 10/192 (5%)
Query: 48  KVVIITGASSGIGEHLAYEYXXXXXXXXXXXXXEKSLEEVADTAREIG-SPDVITIRADV 106
           +V ++TGA+SGIG  +A                E+ L       RE G   D  T   DV
Sbjct: 23  EVALVTGATSGIGLEIARRLGKEGLRVFVCARGEEGLRTTLKELREAGVEADGRT--CDV 80
Query: 107 SKVDDCRSLVEETMNHFGRLDHLVNNAGISSVALFEDIVNITDFKQIMNINFWGSVYTTR 166
             V +  +LV   +  +G +D LVNNAG        ++ +   +  ++  N  G    T+
Sbjct: 81  RSVPEIEALVAAVVERYGPVDVLVNNAGRLGGGATAELAD-ELWLDVVETNLTGVFRVTK 139
Query: 167 F---AVPHLRYTKGKIVVLSSAASWLTAPRMSFYNASKAALVLFFETLRVELGSDVGVTI 223
               A   L    G+IV ++S          + Y+ASK  +V F + L +EL +  G+T+
Sbjct: 140 QVLKAGGMLERGTGRIVNIASTGGKQGVVHAAPYSASKHGVVGFTKALGLEL-ARTGITV 198
Query: 224 --VTPGFIESEL 233
             V PGF+E+ +
Sbjct: 199 NAVCPGFVETPM 210

>pdb|2PD6|A Chain A, Structure Of Human Hydroxysteroid Dehydrogenase Type 8, Hsd17b8 Length = 264

Iteration: 1
 Score = 53.9 bits (128), Expect = 7e-08,   Method: Compositional matrix adjust.
 Identities = 53/201 (26%), Positives = 90/201 (44%), Gaps = 19/201 (9%)
Query: 49  VVIITGASSGIGE----HLAYEYXXXXXXXXXXXXXEKSLEEVADTAREIGSP--DVITI 102
           + ++TGA SGIG      LA E              ++++  +     + G P  +    
Sbjct: 9   LALVTGAGSGIGRAVSVRLAGEGATVAACDLDRAAAQETVRLLGGPGSKEGPPRGNHAAF 68
Query: 103 RADVSKVDDCRSLVEETMNHFGRLDHLV-NNAGISS----VALFEDIVNITDFKQIMNIN 157
           +ADVS+    R L+E+    F R   +V + AGI+     + + ED     D+ +++ +N
Sbjct: 69  QADVSEARAARCLLEQVQACFSRPPSVVVSCAGITQDEFLLHMSED-----DWDKVIAVN 123
Query: 158 FWGSVYTTRFAVPHL--RYTKGKIVVLSSAASWLTAPRMSFYNASKAALVLFFETLRVEL 215
             G+   T+ A   L     +G I+ +SS    +     + Y ASKA ++   +T   EL
Sbjct: 124 LKGTFLVTQAAAQALVSNGCRGSIINISSIVGKVGNVGQTNYAASKAGVIGLTQTAAREL 183
Query: 216 GS-DVGVTIVTPGFIESELTQ 235
           G   +    V PGFI + +TQ
Sbjct: 184 GRHGIRCNSVLPGFIATPMTQ 204

>pdb|1NFF|A Chain A, Crystal Structure Of Rv2002 Gene Product From Mycobacterium Tuberculosis Length = 260

Iteration: 1
 Score = 53.9 bits (128), Expect = 8e-08,   Method: Compositional matrix adjust.
 Identities = 38/135 (28%), Positives = 69/135 (51%), Gaps = 3/135 (2%)
Query: 102 IRADVSKVDDCRSLVEETMNHFGRLDHLVNNAGISSVALFEDIVNITDFKQIMNINFWGS 161
           +  DV++    ++ V+  +  FG L  LVNNAGI ++   ED   +T++++I+++N  G 
Sbjct: 58  VHLDVTQPAQWKAAVDTAVTAFGGLHVLVNNAGILNIGTIEDYA-LTEWQRILDVNLTGV 116
Query: 162 VYTTRFAV-PHLRYTKGKIVVLSSAASWLTAPRMSFYNASKAALVLFFETLRVELG-SDV 219
               R  V P     +G I+ +SS            Y A+K A+    ++  +ELG S +
Sbjct: 117 FLGIRAVVKPMKEAGRGSIINISSIEGLAGTVACHGYTATKFAVRGLTKSTALELGPSGI 176
Query: 220 GVTIVTPGFIESELT 234
            V  + PG +++ +T
Sbjct: 177 RVNSIHPGLVKTPMT 191

>pdb|3SX2|A Chain A, Crystal Structure Of A Putative 3-Ketoacyl-(Acyl-Carrier-Protein) Reductase From Mycobacterium Paratuberculosis In Complex With Nad Length = 278

Iteration: 1
 Score = 53.9 bits (128), Expect = 9e-08,   Method: Compositional matrix adjust.
 Identities = 54/213 (25%), Positives = 97/213 (45%), Gaps = 25/213 (11%)
Query: 45  VSGKVVIITGASSGIGEHLAYEYXXXXXXXXXXXXXEK---------SLEEVADTAR--- 92
           ++GKV  ITGA+ G G   A                ++         + EE+A T +   
Sbjct: 11  LTGKVAFITGAARGQGRAHAVRLAADGADIIAVDLCDQIASVPYPLATPEELAATVKLVE 70
Query: 93  EIGSPDVITIRADVSKVDDCRSLVEETMNHFGRLDHLVNNAGISSVALFEDIVNITDFKQ 152
           +IGS  ++  +ADV   +   + ++  ++  GRLD +V NAGI+ ++  +D      +  
Sbjct: 71  DIGS-RIVARQADVRDRESLSAALQAGLDELGRLDIVVANAGIAPMSAGDD-----GWHD 124
Query: 153 IMNINFWGSVYTTRFAVPHL--RYTKGKIVVLSSAASWLTA----PRMSFYNASKAALVL 206
           ++++N  G  +T + A+P L  + T G IV++SS+A         P    Y A+K  +V 
Sbjct: 125 VIDVNLTGVYHTIKVAIPTLVKQGTGGSIVLISSSAGLAGVGSADPGSVGYVAAKHGVVG 184
Query: 207 FFETLRVEL-GSDVGVTIVTPGFIESELTQGKF 238
                   L G  + V  + P  +E+ +   +F
Sbjct: 185 LMRVYANLLAGQMIRVNSIHPSGVETPMINNEF 217

>pdb|4DC0|A Chain A, Crystal Structure Of F189w Actinorhodin Polyketide Ketoreductase With Nadph Length = 281

Iteration: 1
 Score = 53.5 bits (127), Expect = 1e-07,   Method: Compositional matrix adjust.
 Identities = 53/192 (27%), Positives = 86/192 (44%), Gaps = 10/192 (5%)
Query: 48  KVVIITGASSGIGEHLAYEYXXXXXXXXXXXXXEKSLEEVADTAREIG-SPDVITIRADV 106
           +V ++TGA+SGIG  +A                E+ L       RE G   D  T   DV
Sbjct: 27  EVALVTGATSGIGLEIARRLGKEGLRVFVCARGEEGLRTTLKELREAGVEADGRT--CDV 84
Query: 107 SKVDDCRSLVEETMNHFGRLDHLVNNAGISSVALFEDIVNITDFKQIMNINFWGSVYTTR 166
             V +  +LV   +  +G +D LVNNAG        ++ +   +  ++  N  G    T+
Sbjct: 85  RSVPEIEALVAAVVERYGPVDVLVNNAGRPGGGATAELAD-ELWLDVVETNLTGVFRVTK 143
Query: 167 F---AVPHLRYTKGKIVVLSSAASWLTAPRMSFYNASKAALVLFFETLRVELGSDVGVTI 223
               A   L    G+IV ++S          + Y+ASK  +V F + L +EL +  G+T+
Sbjct: 144 QVLKAGGMLERGTGRIVNIASTGGKQGVVHAAPYSASKHGVVGFTKALGLEL-ARTGITV 202
Query: 224 --VTPGFIESEL 233
             V PG++E+ +
Sbjct: 203 NAVCPGWVETPM 214

>pdb|1A27|A Chain A, Human 17-Beta-Hydroxysteroid-Dehydrogenase Type 1 C-Terminal Deletion Mutant Complexed With Estradiol And Nadp+ Length = 289

Iteration: 1
 Score = 53.1 bits (126), Expect = 1e-07,   Method: Compositional matrix adjust.
 Identities = 56/180 (31%), Positives = 81/180 (45%), Gaps = 23/180 (12%)
Query: 49  VVIITGASSGIGEHLAYEYXXXXXXXXXXXXXEKSLE---EVADTAREIGSPD--VITIR 103
           VV+ITG SSGIG HLA                 + L+    + + AR +  P   + T++
Sbjct: 4   VVLITGCSSGIGLHLAVRLASDPSQSFKVYATLRDLKTQGRLWEAARALACPPGSLETLQ 63
Query: 104 ADV---SKVDDCRSLVEETMNHFGRLDHLVNNAGISSV----ALFEDIVNITDFKQIMNI 156
            DV     V   R  V E     GR+D LV NAG+  +    AL ED V       ++++
Sbjct: 64  LDVRDSKSVAAARERVTE-----GRVDVLVCNAGLGLLGPLEALGEDAV-----ASVLDV 113
Query: 157 NFWGSVYTTRFAVPHL-RYTKGKIVVLSSAASWLTAPRMSFYNASKAALVLFFETLRVEL 215
           N  G+V   +  +P + R   G+++V  S    +  P    Y ASK AL    E+L V L
Sbjct: 114 NVVGTVRMLQAFLPDMKRRGSGRVLVTGSVGGLMGLPFNDVYCASKFALEGLCESLAVLL 173

>pdb|3OML|A Chain A, Structure Of Full-Length Peroxisomal Multifunctional Enzyme Type 2 From Drosophila Melanogaster Length = 613

Iteration: 1
 Score = 53.1 bits (126), Expect = 1e-07,   Method: Compositional matrix adjust.
 Identities = 53/205 (25%), Positives = 92/205 (44%), Gaps = 25/205 (12%)
Query: 47  GKVVIITGASSGIGEHLAYEYXXXXXXX---------XXXXXXEKSLEEVADTAREIGSP 97
           G+V ++TGA +G+G   A  +                      +++ + V D  R+ G  
Sbjct: 19  GRVAVVTGAGAGLGREYALLFAERGAKVVVNDLGGTHSGDGASQRAADIVVDEIRKAGGE 78
Query: 98  DVITIRADVSKVDDCRSLVEETMNHFGRLDHLVNNAGI----SSVALFEDIVNITDFKQI 153
            V    AD + V D   ++E  +  FGR+D LVNNAGI    S V   E      D+  +
Sbjct: 79  AV----ADYNSVIDGAKVIETAIKAFGRVDILVNNAGILRDRSLVKTSEQ-----DWNLV 129
Query: 154 MNINFWGSVYTTRFAVPHLRYTK-GKIVVLSSAASWLTAPRMSFYNASKAALVLFFETLR 212
            +++  GS   T+ A P+++    G+I++ SS +          Y A+K  L+    T+ 
Sbjct: 130 NDVHLKGSFKCTQAAFPYMKKQNYGRIIMTSSNSGIYGNFGQVNYTAAKMGLIGLANTVA 189
Query: 213 VELG-SDVGVTIVTPGFIESELTQG 236
           +E   ++V   ++ P    S +T+G
Sbjct: 190 IEGARNNVLCNVIVP-TAASRMTEG 213

>pdb|3GAF|A Chain A, 2.2a Crystal Structure Of 7-Alpha-Hydroxysteroid Dehydrogenase From Brucella Melitensis Length = 256

Iteration: 1
 Score = 53.1 bits (126), Expect = 1e-07,   Method: Compositional matrix adjust.
 Identities = 49/186 (26%), Positives = 91/186 (48%), Gaps = 5/186 (2%)
Query: 49  VVIITGASSGIGEHLAYEYXXXXXXXXXXXXXEKSLEEVADTAREIGSPDVITIRADVSK 108
           V I+TGA++GIG  +A  +              +  E VA   R+ G    I +  +V+ 
Sbjct: 14  VAIVTGAAAGIGRAIAGTFAKAGASVVVTDLKSEGAEAVAAAIRQAGG-KAIGLECNVTD 72
Query: 109 VDDCRSLVEETMNHFGRLDHLVNNAGISSVALFEDIVNITDFKQIMNINFWGSVYTTRFA 168
                ++++  ++ FG++  LVNNAG      F+  + ++DF+    +N +     ++ A
Sbjct: 73  EQHREAVIKAALDQFGKITVLVNNAGGGGPKPFD--MPMSDFEWAFKLNLFSLFRLSQLA 130
Query: 169 VPHLRYT-KGKIVVLSSAASWLTAPRMSFYNASKAALVLFFETLRVELGS-DVGVTIVTP 226
            PH++    G I+ +SS A   T  RM+ Y +SKAA+      +  ++G   + V  + P
Sbjct: 131 APHMQKAGGGAILNISSMAGENTNVRMASYGSSKAAVNHLTRNIAFDVGPMGIRVNAIAP 190
Query: 227 GFIESE 232
           G I+++
Sbjct: 191 GAIKTD 196

>pdb|1FDU|A Chain A, Human 17-Beta-Hydroxysteroid-Dehydrogenase Type 1 Mutant H221l Complexed With Estradiol And Nadp+ Length = 327

Iteration: 1
 Score = 53.1 bits (126), Expect = 1e-07,   Method: Compositional matrix adjust.
 Identities = 56/180 (31%), Positives = 81/180 (45%), Gaps = 23/180 (12%)
Query: 49  VVIITGASSGIGEHLAYEYXXXXXXXXXXXXXEKSLE---EVADTAREIGSPD--VITIR 103
           VV+ITG SSGIG HLA                 + L+    + + AR +  P   + T++
Sbjct: 4   VVLITGCSSGIGLHLAVRLASDPSQSFKVYATLRDLKTQGRLWEAARALACPPGSLETLQ 63
Query: 104 ADV---SKVDDCRSLVEETMNHFGRLDHLVNNAGISSV----ALFEDIVNITDFKQIMNI 156
            DV     V   R  V E     GR+D LV NAG+  +    AL ED V       ++++
Sbjct: 64  LDVRDSKSVAAARERVTE-----GRVDVLVCNAGLGLLGPLEALGEDAV-----ASVLDV 113
Query: 157 NFWGSVYTTRFAVPHL-RYTKGKIVVLSSAASWLTAPRMSFYNASKAALVLFFETLRVEL 215
           N  G+V   +  +P + R   G+++V  S    +  P    Y ASK AL    E+L V L
Sbjct: 114 NVVGTVRMLQAFLPDMKRRGSGRVLVTGSVGGLMGLPFNDVYCASKFALEGLCESLAVLL 173

>pdb|1FDW|A Chain A, Human 17-Beta-Hydroxysteroid-Dehydrogenase Type 1 Mutant H221q Complexed With Estradiol Length = 327

Iteration: 1
 Score = 53.1 bits (126), Expect = 1e-07,   Method: Compositional matrix adjust.
 Identities = 56/180 (31%), Positives = 81/180 (45%), Gaps = 23/180 (12%)
Query: 49  VVIITGASSGIGEHLAYEYXXXXXXXXXXXXXEKSLE---EVADTAREIGSPD--VITIR 103
           VV+ITG SSGIG HLA                 + L+    + + AR +  P   + T++
Sbjct: 4   VVLITGCSSGIGLHLAVRLASDPSQSFKVYATLRDLKTQGRLWEAARALACPPGSLETLQ 63
Query: 104 ADV---SKVDDCRSLVEETMNHFGRLDHLVNNAGISSV----ALFEDIVNITDFKQIMNI 156
            DV     V   R  V E     GR+D LV NAG+  +    AL ED V       ++++
Sbjct: 64  LDVRDSKSVAAARERVTE-----GRVDVLVCNAGLGLLGPLEALGEDAV-----ASVLDV 113
Query: 157 NFWGSVYTTRFAVPHL-RYTKGKIVVLSSAASWLTAPRMSFYNASKAALVLFFETLRVEL 215
           N  G+V   +  +P + R   G+++V  S    +  P    Y ASK AL    E+L V L
Sbjct: 114 NVVGTVRMLQAFLPDMKRRGSGRVLVTGSVGGLMGLPFNDVYCASKFALEGLCESLAVLL 173

>pdb|1FDS|A Chain A, Human 17-Beta-Hydroxysteroid-Dehydrogenase Type 1 Complexed With 17- Beta-Estradiol Length = 327

Iteration: 1
 Score = 53.1 bits (126), Expect = 1e-07,   Method: Compositional matrix adjust.
 Identities = 56/180 (31%), Positives = 81/180 (45%), Gaps = 23/180 (12%)
Query: 49  VVIITGASSGIGEHLAYEYXXXXXXXXXXXXXEKSLE---EVADTAREIGSPD--VITIR 103
           VV+ITG SSGIG HLA                 + L+    + + AR +  P   + T++
Sbjct: 4   VVLITGCSSGIGLHLAVRLASDPSQSFKVYATLRDLKTQGRLWEAARALACPPGSLETLQ 63
Query: 104 ADV---SKVDDCRSLVEETMNHFGRLDHLVNNAGISSV----ALFEDIVNITDFKQIMNI 156
            DV     V   R  V E     GR+D LV NAG+  +    AL ED V       ++++
Sbjct: 64  LDVRDSKSVAAARERVTE-----GRVDVLVCNAGLGLLGPLEALGEDAV-----ASVLDV 113
Query: 157 NFWGSVYTTRFAVPHL-RYTKGKIVVLSSAASWLTAPRMSFYNASKAALVLFFETLRVEL 215
           N  G+V   +  +P + R   G+++V  S    +  P    Y ASK AL    E+L V L
Sbjct: 114 NVVGTVRMLQAFLPDMKRRGSGRVLVTGSVGGLMGLPFNDVYCASKFALEGLCESLAVLL 173

>pdb|1EQU|A Chain A, Type 1 17-Beta Hydroxysteroid Dehydrogenase Equilin Complexed With Nadp+ Length = 327

Iteration: 1
 Score = 53.1 bits (126), Expect = 1e-07,   Method: Compositional matrix adjust.
 Identities = 56/180 (31%), Positives = 81/180 (45%), Gaps = 23/180 (12%)
Query: 49  VVIITGASSGIGEHLAYEYXXXXXXXXXXXXXEKSLE---EVADTAREIGSPD--VITIR 103
           VV+ITG SSGIG HLA                 + L+    + + AR +  P   + T++
Sbjct: 4   VVLITGCSSGIGLHLAVRLASDPSQSFKVYATLRDLKTQGRLWEAARALACPPGSLETLQ 63
Query: 104 ADV---SKVDDCRSLVEETMNHFGRLDHLVNNAGISSV----ALFEDIVNITDFKQIMNI 156
            DV     V   R  V E     GR+D LV NAG+  +    AL ED V       ++++
Sbjct: 64  LDVRDSKSVAAARERVTE-----GRVDVLVCNAGLGLLGPLEALGEDAV-----ASVLDV 113
Query: 157 NFWGSVYTTRFAVPHL-RYTKGKIVVLSSAASWLTAPRMSFYNASKAALVLFFETLRVEL 215
           N  G+V   +  +P + R   G+++V  S    +  P    Y ASK AL    E+L V L
Sbjct: 114 NVVGTVRMLQAFLPDMKRRGSGRVLVTGSVGGLMGLPFNDVYCASKFALEGLCESLAVLL 173

>pdb|3P19|A Chain A, Improved Nadph-Dependent Blue Fluorescent Protein Length = 266

Iteration: 1
 Score = 53.1 bits (126), Expect = 1e-07,   Method: Compositional matrix adjust.
 Identities = 47/188 (25%), Positives = 86/188 (45%), Gaps = 10/188 (5%)
Query: 48  KVVIITGASSGIGEHLAYEYXXXXXXXXXXXXXEKSLEEVADTAREIGSPDVITIRADVS 107
           K+V+ITGASSGIGE +A  +                L    +  + +  P+ +  + DV+
Sbjct: 17  KLVVITGASSGIGEAIARRFSEEGHPLLL-------LARRVERLKALNLPNTLCAQVDVT 69
Query: 108 KVDDCRSLVEETMNHFGRLDHLVNNAGISSVALFEDIVNITDFKQIMNINFWGSVYTTRF 167
                 + +      +G  D +VNNAG+  +    D     +++++ ++N  G +   + 
Sbjct: 70  DKYTFDTAITRAEKIYGPADAIVNNAGMMLLGQI-DTQEANEWQRMFDVNVLGLLNGMQA 128
Query: 168 AV-PHLRYTKGKIVVLSSAASWLTAPRMSFYNASKAALVLFFETLRVEL-GSDVGVTIVT 225
            + P      G I+ +SS A   T P  + Y  +K A+    E +R E+  S+V V  + 
Sbjct: 129 VLAPMKARNCGTIINISSIAGKKTFPDHAAYCGTKFAVHAISENVREEVAASNVRVMTIA 188
Query: 226 PGFIESEL 233
           P  +++EL
Sbjct: 189 PSAVKTEL 196

>pdb|3AFM|A Chain A, Crystal Structure Of Aldose Reductase A1-R Responsible For Alginate Metabolism Length = 258

Iteration: 1
 Score = 52.8 bits (125), Expect = 2e-07,   Method: Compositional matrix adjust.
 Identities = 43/141 (30%), Positives = 68/141 (48%), Gaps = 24/141 (17%)
Query: 44  DVSGKVVIITGASSGIGEHLAYEYXXXXXXXXXXXXXEKSLEEVADTAREIGSPDVITIR 103
           D+ GK V+ITG+S GIG  LA                 K+   + +T        + ++R
Sbjct: 4   DLKGKRVLITGSSQGIG--LATARLFARAGAKVGLHGRKAPANIDET--------IASMR 53
Query: 104 AD----------VSKVDDCRSLVEETMNHFGRLDHLVNNAG--ISSVALFEDIVNITDFK 151
           AD          ++  + C+ LV+E +  FG +D L+NNAG  +    L E  ++ T + 
Sbjct: 54  ADGGDAAFFAADLATSEACQQLVDEFVAKFGGIDVLINNAGGLVGRKPLPE--IDDTFYD 111
Query: 152 QIMNINFWGSVYTTRFAVPHL 172
            +M+ N    V TT+FA+PHL
Sbjct: 112 AVMDANIRSVVMTTKFALPHL 132

>pdb|1NFR|A Chain A, Rv2002 Gene Product From Mycobacterium Tuberculosis Length = 260

Iteration: 1
 Score = 52.8 bits (125), Expect = 2e-07,   Method: Compositional matrix adjust.
 Identities = 38/135 (28%), Positives = 68/135 (50%), Gaps = 3/135 (2%)
Query: 102 IRADVSKVDDCRSLVEETMNHFGRLDHLVNNAGISSVALFEDIVNITDFKQIMNINFWGS 161
           +  DV++    ++ V+  +  FG L  LVNNAGI ++   ED   +T++++I+++N  G 
Sbjct: 58  VHLDVTQPAQWKAAVDTAVTAFGGLHVLVNNAGILNIGTIEDYA-LTEWQRILDVNLTGV 116
Query: 162 VYTTRFAV-PHLRYTKGKIVVLSSAASWLTAPRMSFYNASKAALVLFFETLRVELG-SDV 219
               R  V P     +G I+ +SS            Y A+K A+    ++  +ELG S +
Sbjct: 117 FLGIRAVVKPXKEAGRGSIINISSIEGLAGTVACHGYTATKFAVRGLTKSTALELGPSGI 176
Query: 220 GVTIVTPGFIESELT 234
            V  + PG +++  T
Sbjct: 177 RVNSIHPGLVKTPXT 191

>pdb|1IY8|A Chain A, Crystal Structure Of Levodione Reductase Length = 267

Iteration: 1
 Score = 52.4 bits (124), Expect = 2e-07,   Method: Compositional matrix adjust.
 Identities = 51/194 (26%), Positives = 81/194 (41%), Gaps = 9/194 (4%)
Query: 48  KVVIITGASSGIGE----HLAYEYXXXXXXXXXXXXXEKSLEEVADTAREIGSPDVITIR 103
           +VV+ITG  SG+G      LA E              E S   V +TA +    +V+T  
Sbjct: 14  RVVLITGGGSGLGRATAVRLAAEGAKLSLVDVSSEGLEASKAAVLETAPDA---EVLTTV 70
Query: 104 ADVSKVDDCRSLVEETMNHFGRLDHLVNNAGISSVALFEDIVNITDFKQIMNINFWGSVY 163
           ADVS      + V  T   FGR+D   NNAGI       +     +F ++++IN  G   
Sbjct: 71  ADVSDEAQVEAYVTATTERFGRIDGFFNNAGIEGKQNPTESFTAAEFDKVVSINLRGVFL 130
Query: 164 TTRFAVPHLRYTKGKIVVLSSAASWLTA-PRMSFYNASKAALVLFFETLRVELGS-DVGV 221
                +  +R     +VV +++   +      S Y A+K  +V       VE G   + +
Sbjct: 131 GLEKVLKIMREQGSGMVVNTASVGGIRGIGNQSGYAAAKHGVVGLTRNSAVEYGRYGIRI 190
Query: 222 TIVTPGFIESELTQ 235
             + PG I + + +
Sbjct: 191 NAIAPGAIWTPMVE 204

>pdb|1IOL|A Chain A, Estrogenic 17-beta Hydroxysteroid Dehydrogenase Complexed 17-beta- Estradiol Length = 327

Iteration: 1
 Score = 52.4 bits (124), Expect = 2e-07,   Method: Compositional matrix adjust.
 Identities = 56/180 (31%), Positives = 80/180 (44%), Gaps = 23/180 (12%)
Query: 49  VVIITGASSGIGEHLAYEYXXXXXXXXXXXXXEKSLE---EVADTAREIGSPD--VITIR 103
           VV+ITG SSGIG HLA                 + L+    + + AR +  P   + T++
Sbjct: 4   VVLITGCSSGIGLHLAVRLASDPSQSFKVYATLRDLKTQGRLWEAARALACPPGSLETLQ 63
Query: 104 ADV---SKVDDCRSLVEETMNHFGRLDHLVNNAGISSV----ALFEDIVNITDFKQIMNI 156
            DV     V   R  V E     GR+D LV NAG+  +    AL ED V       ++ +
Sbjct: 64  LDVRDSKSVAAARERVTE-----GRVDVLVCNAGLGLLGPLEALGEDAV-----ASVLEV 113
Query: 157 NFWGSVYTTRFAVPHL-RYTKGKIVVLSSAASWLTAPRMSFYNASKAALVLFFETLRVEL 215
           N  G+V   +  +P + R   G+++V  S    +  P    Y ASK AL    E+L V L
Sbjct: 114 NVVGTVRMLQAFLPDMKRRGSGRVLVTGSVGGLMGLPFNDVYCASKFALEGLCESLAVLL 173

>pdb|1GZ6|A Chain A, (3r)-Hydroxyacyl-Coa Dehydrogenase Fragment Of Rat Peroxisomal Multifunctional Enzyme Type 2 Length = 319

Iteration: 1
 Score = 52.4 bits (124), Expect = 3e-07,   Method: Compositional matrix adjust.
 Identities = 48/178 (26%), Positives = 78/178 (43%), Gaps = 15/178 (8%)
Query: 47  GKVVIITGASSGIGEHLAYEYXXXXXXX---------XXXXXXEKSLEEVADTAREIGSP 97
           G+VV++TGA  G+G   A  +                        + ++V +  R  G  
Sbjct: 9   GRVVLVTGAGGGLGRAYALAFAERGALVVVNDLGGDFKGVGKGSSAADKVVEEIRRRGGK 68
Query: 98  DVITIRADVSKVDDCRSLVEETMNHFGRLDHLVNNAGISSVALFEDIVNITDFKQIMNIN 157
            V    A+   V+    LV+  ++ FGR+D +VNNAGI     F  I +  D+  I  ++
Sbjct: 69  AV----ANYDSVEAGEKLVKTALDTFGRIDVVVNNAGILRDRSFSRISD-EDWDIIQRVH 123
Query: 158 FWGSVYTTRFAVPHLRYTK-GKIVVLSSAASWLTAPRMSFYNASKAALVLFFETLRVE 214
             GS   TR A  H +    G+I+  +SA+        + Y+A+K  L+    TL +E
Sbjct: 124 LRGSFQVTRAAWDHXKKQNYGRIIXTASASGIYGNFGQANYSAAKLGLLGLANTLVIE 181

>pdb|1H5Q|A Chain A, Mannitol Dehydrogenase From Agaricus Bisporus Length = 265

Iteration: 1
 Score = 52.0 bits (123), Expect = 3e-07,   Method: Compositional matrix adjust.
 Identities = 54/201 (26%), Positives = 92/201 (45%), Gaps = 19/201 (9%)
Query: 48  KVVIITGASSGIGEHLAYEYXXXXXXXXXXXXXEKSLEEVADTAREIGSPDVITIRA--- 104
           K +I+TG + GIG  LA+                +S  +  +   ++G    +  +A   
Sbjct: 15  KTIIVTGGNRGIG--LAFTRAVAAAGANVAVIY-RSAADAVEVTEKVGKEFGVKTKAYQC 71
Query: 105 DVSKVDDCRSLVEETMNHFGRLDHLVNNAGISSVALFEDIVNITDFKQIMNINFWGSVYT 164
           DVS  D     +++     G +  L+ NAG+S V    ++ +  DF  + ++N +G V+ 
Sbjct: 72  DVSNTDIVTKTIQQIDADLGPISGLIANAGVSVVKPATELTH-EDFAFVYDVNVFG-VFN 129
Query: 165 TRFAVPHL---RYTKGKIVVLSSAASWLT-------APRMSFYNASKAALVLFFETLRVE 214
           T  AV  L   +  KG IVV SS +S +        +    FYN+SKAA     + L  E
Sbjct: 130 TCRAVAKLWLQKQQKGSIVVTSSMSSQIINQSSLNGSLTQVFYNSSKAACSNLVKGLAAE 189
Query: 215 LGS-DVGVTIVTPGFIESELT 234
             S  + V  ++PG++ ++ T
Sbjct: 190 WASAGIRVNALSPGYVNTDQT 210

>pdb|3S55|A Chain A, Crystal Structure Of A Putative Short-Chain DehydrogenaseREDUCTASE From Mycobacterium Abscessus Bound To Nad Length = 281

Iteration: 1
 Score = 52.0 bits (123), Expect = 3e-07,   Method: Compositional matrix adjust.
 Identities = 53/211 (25%), Positives = 87/211 (41%), Gaps = 14/211 (6%)
Query: 44  DVSGKVVIITGASSGIGEHLAYEYXXXXXXXXXXXXXEKS---------LEEVADTAR-- 92
           D  GK  +ITG + G+G   A                E S          +++A+T    
Sbjct: 7   DFEGKTALITGGARGMGRSHAVALAEAGADIAICDRCENSDVVGYPLATADDLAETVALV 66
Query: 93  EIGSPDVITIRADVSKVDDCRSLVEETMNHFGRLDHLVNNAGISSVALFEDIVNITDFKQ 152
           E      I+ + DV       S V E  +  G +D  + NAGIS++AL  + V    + +
Sbjct: 67  EKTGRRCISAKVDVKDRAALESFVAEAEDTLGGIDIAITNAGISTIALLPE-VESAQWDE 125
Query: 153 IMNINFWGSVYTTRFAVPHL-RYTKGKIVVLSSAASWLTAPRMSFYNASKAALVLFFETL 211
           ++  N  G+  T     P + +   G+IV +SS          + Y +SK  ++   +  
Sbjct: 126 VIGTNLTGTFNTIAAVAPGMIKRNYGRIVTVSSMLGHSANFAQASYVSSKWGVIGLTKCA 185
Query: 212 RVEL-GSDVGVTIVTPGFIESELTQGKFLTG 241
             +L G  + V  V PG IE+ +T   F+ G
Sbjct: 186 AHDLVGYGITVNAVAPGNIETPMTHNDFVFG 216

>pdb|3R3S|A Chain A, Structure Of The Ygha Oxidoreductase From Salmonella Enterica Length = 294

Iteration: 1
 Score = 52.0 bits (123), Expect = 3e-07,   Method: Compositional matrix adjust.
 Identities = 53/192 (27%), Positives = 87/192 (45%), Gaps = 11/192 (5%)
Query: 48  KVVIITGASSGIGE--HLAYEYXXXXXXXXXXXXXEKSLEEVADTAREIGSPDVITIRAD 105
           +  ++TG  SGIG    +AY               E+  ++V     E G   V+ +  D
Sbjct: 50  RKALVTGGDSGIGRAAAIAYAREGADVAINYLPAEEEDAQQVKALIEECGRKAVL-LPGD 108
Query: 106 VSKVDDCRSLVEETMNHFGRLDHLVNNAGISSVALFEDIVNIT--DFKQIMNINFWGSVY 163
           +S     RSLV +     G LD L   AG  +     +I ++T   F+Q   +N +   +
Sbjct: 109 LSDESFARSLVHKAREALGGLDILALVAGKQTA--IPEIKDLTSEQFQQTFAVNVFALFW 166
Query: 164 TTRFAVPHLRYTKG-KIVVLSSAASWLTAPRMSFYNASKAALVLFFETLRVELGSD-VGV 221
            T+ A+P L   KG  I+  SS  ++  +P +  Y A+KAA++ +   L  ++    + V
Sbjct: 167 ITQEAIPLL--PKGASIITTSSIQAYQPSPHLLDYAATKAAILNYSRGLAKQVAEKGIRV 224
Query: 222 TIVTPGFIESEL 233
            IV PG I + L
Sbjct: 225 NIVAPGPIWTAL 236

>pdb|1YXM|A Chain A, Crystal Structure Of Peroxisomal Trans 2-Enoyl Coa Reductase Length = 303

Iteration: 1
 Score = 51.6 bits (122), Expect = 4e-07,   Method: Compositional matrix adjust.
 Identities = 44/193 (22%), Positives = 85/193 (44%), Gaps = 6/193 (3%)
Query: 45  VSGKVVIITGASSGIGEHLAYEYXXXXXXXXXXXXXEKSLEEVADTAREIGSPD----VI 100
           + G+V I+TG ++GIG+ +  E               + L+  AD  +    P     VI
Sbjct: 16  LQGQVAIVTGGATGIGKAIVKELLELGSNVVIASRKLERLKSAADELQANLPPTKQARVI 75
Query: 101 TIRADVSKVDDCRSLVEETMNHFGRLDHLVNNAGISSVALFEDIVNITDFKQIMNINFWG 160
            I+ ++   ++  +LV+ T++ FG+++ LVNN G   ++  E I +   +  ++  N  G
Sbjct: 76  PIQCNIRNEEEVNNLVKSTLDTFGKINFLVNNGGGQFLSPAEHISS-KGWHAVLETNLTG 134
Query: 161 SVYTTRFAVPHLRYTKGKIVVLSSAASWLTAPRMSFYNASKAALVLFFETLRVELG-SDV 219
           + Y  +          G  +V     +    P      A++A +    ++L +E   S +
Sbjct: 135 TFYMCKAVYSSWMKEHGGSIVNIIVPTKAGFPLAVHSGAARAGVYNLTKSLALEWACSGI 194
Query: 220 GVTIVTPGFIESE 232
            +  V PG I S+
Sbjct: 195 RINCVAPGVIYSQ 207

>pdb|4IIU|A Chain A, Crystal Structure Of A Putative 3-Oxoacyl-[acyl-Carrier Protein]reductase From Escherichia Coli Strain Cft073 Complexed With Nadp+ At 2.1 A Resolution Length = 267

Iteration: 1
 Score = 51.2 bits (121), Expect = 6e-07,   Method: Compositional matrix adjust.
 Identities = 47/207 (22%), Positives = 94/207 (45%), Gaps = 16/207 (7%)
Query: 38  NSIFSEDVSGKVVIITGASSGIGEHLAYE-----YXXXXXXXXXXXXXEKSLEEVADTAR 92
           N  F  +   + V++TGAS GIG  +A +     +             +++L  +     
Sbjct: 17  NLYFQSNAMSRSVLVTGASKGIGRAIARQLAADGFNIGVHYHRDAAGAQETLNAIVANG- 75
Query: 93  EIGSPDVITIRADVSKVDDCRSLVEETMNHFGRLDHLVNNAGISSVALFEDIVNITDFKQ 152
             G+  +++   DV+  + CR ++E  +   G    +V+NAGI+  A F  + N  D+  
Sbjct: 76  --GNGRLLSF--DVANREQCREVLEHEIAQHGAWYGVVSNAGIARDAAFPALSN-DDWDA 130
Query: 153 IMNIN---FWGSVYTTRFAVPHLRYTKGKIVVLSSAASWLTAPRMSFYNASKAALVLFFE 209
           +++ N   F+  +      +   R   G+I+ LSS +  +       Y+A+KA ++   +
Sbjct: 131 VIHTNLDSFYNVIQPCIMPMIGAR-QGGRIITLSSVSGVMGNRGQVNYSAAKAGIIGATK 189
Query: 210 TLRVELGS-DVGVTIVTPGFIESELTQ 235
            L +EL    + V  + PG I++ + +
Sbjct: 190 ALAIELAKRKITVNCIAPGLIDTGMIE 216

>pdb|3GK3|A Chain A, Crystal Structure Of Acetoacetyl-Coa Reductase From Burkholderia Pseudomallei 1710b Length = 269

Iteration: 1
 Score = 50.8 bits (120), Expect = 6e-07,   Method: Compositional matrix adjust.
 Identities = 39/140 (27%), Positives = 68/140 (48%), Gaps = 17/140 (12%)
Query: 105 DVSKVDDCRSLVEETMNHFGRLDHLVNNAGISSVALFE-------DIVNITDFKQIMNIN 157
           DV+  + C    E+ +  FG++D L+NNAGI+  A F        D V  TD   + N+ 
Sbjct: 83  DVADFESCERCAEKVLADFGKVDVLINNAGITRDATFMKMTKGDWDAVMRTDLDAMFNV- 141
Query: 158 FWGSVYTTRFAVPHLRYTKGKIVVLSSAASWLTAPRMSFYNASKAALVLFFETLRVELGS 217
                 T +F    +    G+IV + S      A   + Y ++KA +  F +TL +E  +
Sbjct: 142 ------TKQFIAGMVERRFGRIVNIGSVNGSRGAFGQANYASAKAGIHGFTKTLALET-A 194
Query: 218 DVGVTI--VTPGFIESELTQ 235
             G+T+  V+PG++ + + +
Sbjct: 195 KRGITVNTVSPGYLATAMVE 214

>pdb|4GKB|A Chain A, Crystal Structure Of A Short Chain Dehydrogenase Homolog (Target Efi- 505321) From Burkholderia Multivorans, Unliganded Structure Length = 258

Iteration: 1
 Score = 50.8 bits (120), Expect = 7e-07,   Method: Compositional matrix adjust.
 Identities = 40/123 (32%), Positives = 54/123 (43%), Gaps = 3/123 (2%)
Query: 112 CRSLVEETMNHFGRLDHLVNNAGISSVALFEDIVNITDFKQIMNINFWGSVYTTRFAVPH 171
           CR  V +T+  FGRLD LVNNAG++     +       F   +  N         + VPH
Sbjct: 70  CRDAVAQTIATFGRLDGLVNNAGVNDGIGLD--AGRDAFVASLERNLIHYYAMAHYCVPH 127
Query: 172 LRYTKGKIVVLSSAASWLTAPRMSFYNASKAALVLFFETLRVELGSD-VGVTIVTPGFIE 230
           L+ T+G IV +SS  +       S Y ASK A +       V L    V V  V P  + 
Sbjct: 128 LKATRGAIVNISSKTAVTGQGNTSGYCASKGAQLALTREWAVALREHGVRVNAVIPAEVM 187
Query: 231 SEL 233
           + L
Sbjct: 188 TPL 190

>pdb|1XQ1|A Chain A, X-Ray Structure Of Putative Tropinone Reducatse From Arabidopsis Thaliana Gene At1g07440 Length = 266

Iteration: 1
 Score = 50.4 bits (119), Expect = 9e-07,   Method: Compositional matrix adjust.
 Identities = 52/195 (26%), Positives = 84/195 (43%), Gaps = 7/195 (3%)
Query: 48  KVVIITGASSGIGEHLAYEYXXXXXXXXXXXXXEKSLEEVADTAREIGSPDVITIRADVS 107
           K V++TG + GIG  +  E+             E  L E     ++ G   V     D S
Sbjct: 15  KTVLVTGGTKGIGHAIVEEFAGFGAVIHTCARNEYELNECLSKWQKKGF-QVTGSVCDAS 73
Query: 108 KVDDCRSLVEETMNHF-GRLDHLVNNAG-ISSVALFEDIVNITDFKQIMNINFWGSVYTT 165
              +   L++   + F G+LD L+NN G I S    +      DF   ++ N   + + +
Sbjct: 74  LRPEREKLMQTVSSMFGGKLDILINNLGAIRSKPTLD--YTAEDFSFHISTNLESAYHLS 131
Query: 166 RFAVPHLRYTK-GKIVVLSSAASWLTAPRMSFYNASKAALVLFFETLRVELGSD-VGVTI 223
           + A P L+ +  G I+ +SS A  ++A   S Y+A+K AL      L  E  SD +    
Sbjct: 132 QLAHPLLKASGCGNIIFMSSIAGVVSASVGSIYSATKGALNQLARNLACEWASDGIRANA 191
Query: 224 VTPGFIESELTQGKF 238
           V P  I + L +  +
Sbjct: 192 VAPAVIATPLAEAVY 206

>pdb|3F5Q|A Chain A, Crystal Structure Of Putative Short Chain Dehydrogenase From Escherichia Coli Cft073 Length = 262

Iteration: 1
 Score = 50.4 bits (119), Expect = 9e-07,   Method: Compositional matrix adjust.
 Identities = 47/204 (23%), Positives = 83/204 (40%), Gaps = 19/204 (9%)
Query: 48  KVVIITGASSGIGEHLAYEYXXXXXXXXXXXXXEKSLEEVA-----DTAREIGSPDVITI 102
           +++++TGAS GIG   A  Y             E+ L +VA     +T R+   P    +
Sbjct: 15  RIILVTGASDGIGREAAMTYARYGATVILLGRNEEKLRQVASHINEETGRQ---PQWFIL 71
Query: 103 RADVSKVDDCRSLVEETMNHFGRLDHLVNNAGISSVALFEDIVNITD-----FKQIMNIN 157
                  +DC+ L +    ++ RLD +++NAG     L  D+  +++     ++ +M +N
Sbjct: 72  DLLTCTSEDCQQLAQRIAVNYPRLDGVLHNAG-----LLGDVCPMSEQDPQVWQDVMQVN 126
Query: 158 FWGS-VYTTRFAVPHLRYTKGKIVVLSSAASWLTAPRMSFYNASKAALVLFFETLRVELG 216
              + + T       L+   G +V  SS+           Y ASK A     + L  E  
Sbjct: 127 VNATFMLTQALLPLLLKSDAGSLVFTSSSVGRQGRANWGAYAASKFATEGMMQVLADEYQ 186
Query: 217 SDVGVTIVTPGFIESELTQGKFLT 240
             + V  + PG   + +    F T
Sbjct: 187 QRLRVNCINPGGTRTAMRASAFPT 210

>pdb|3F5S|A Chain A, Crystal Structure Of Putatitve Short Chain Dehydrogenase From Shigella Flexneri 2a Str. 301 Length = 255

Iteration: 1
 Score = 50.4 bits (119), Expect = 1e-06,   Method: Compositional matrix adjust.
 Identities = 47/208 (22%), Positives = 85/208 (40%), Gaps = 9/208 (4%)
Query: 39  SIFSEDVSGKVVIITGASSGIGEHLAYEYXXXXXXXXXXXXXEKSLEEVA-----DTARE 93
           S+  + ++ +++++TGAS GIG   A  Y             E+ L +VA     +T R+
Sbjct: 2   SLKQDLLNDRIILVTGASDGIGREAAMTYARYGATVILLGRNEEKLRQVASHINEETGRQ 61
Query: 94  IGSPDVITIRADVSKVDDCRSLVEETMNHFGRLDHLVNNAGISSVALFEDIVNITDFKQI 153
              P    +       ++C+ L +  + ++ RLD +++NAG+          N   ++ +
Sbjct: 62  ---PQWFILDLLTCTSENCQQLAQRIVVNYPRLDGVLHNAGLLGDVCPMSEQNPQVWQDV 118
Query: 154 MNINFWGS-VYTTRFAVPHLRYTKGKIVVLSSAASWLTAPRMSFYNASKAALVLFFETLR 212
           M IN   + + T       L+   G +V  SS+           Y ASK A     + L 
Sbjct: 119 MQINVNATFMLTQALLPLLLKSDAGSLVFTSSSVGRQGRANWGAYAASKFATEGMMQVLA 178
Query: 213 VELGSDVGVTIVTPGFIESELTQGKFLT 240
            E    + V  + PG   + +    F T
Sbjct: 179 DEYQQRLRVNCINPGGTRTAMRASAFPT 206

>pdb|3T4X|A Chain A, Short Chain DehydrogenaseREDUCTASE FAMILY OXIDOREDUCTASE FROM Bacillus Anthracis Str. Ames Ancestor Length = 267

Iteration: 1
 Score = 50.1 bits (118), Expect = 1e-06,   Method: Compositional matrix adjust.
 Identities = 40/163 (24%), Positives = 80/163 (49%), Gaps = 13/163 (7%)
Query: 44  DVSGKVVIITGASSGIGEHLAYEYXXXXXXXXXXXXXEKSLEEVADTAREIGS--PDVI- 100
            + GK  ++TG+++GIG+ +A                E   E V +T +EI +  PD I 
Sbjct: 7   QLKGKTALVTGSTAGIGKAIATSLVAEGANVLINGRRE---ENVNETIKEIRAQYPDAIL 63
Query: 101 -TIRADVSKVDDCRSLVEETMNHFGRLDHLVNNAGISSVALFEDIVNITDFKQIMNINFW 159
             + AD+     C+ ++E+    + ++D L+NN GI     + DI +  D+ ++  +N  
Sbjct: 64  QPVVADLGTEQGCQDVIEK----YPKVDILINNLGIFEPVEYFDIPD-EDWFKLFEVNIX 118
Query: 160 GSVYTTR-FAVPHLRYTKGKIVVLSSAASWLTAPRMSFYNASK 201
             V  TR +    +   +G+++ ++S A+   +   + Y+A+K
Sbjct: 119 SGVRLTRSYLKKXIERKEGRVIFIASEAAIXPSQEXAHYSATK 161

>pdb|3RKR|A Chain A, Crystal Structure Of A Metagenomic Short-Chain Oxidoreductase (Sdr) In Complex With Nadp Length = 262

Iteration: 1
 Score = 49.7 bits (117), Expect = 2e-06,   Method: Compositional matrix adjust.
 Identities = 50/196 (25%), Positives = 82/196 (41%), Gaps = 7/196 (3%)
Query: 45  VSGKVVIITGASSGIGEHLAYEYXXXXXXXXXXXXXEKSLEEVADTAREI--GSPDVITI 102
           +SG+V ++TGAS GIG  +A +               + +E++    REI     +  + 
Sbjct: 27  LSGQVAVVTGASRGIGAAIARKLGSLGARVVLTA---RDVEKLRAVEREIVAAGGEAESH 83
Query: 103 RADVSKVDDCRSLVEETMNHFGRLDHLVNNAGISSVALFEDIVNITDFKQIMNINFWGSV 162
             D+S  D   +     +   GR D LVNNAG+         +   ++  ++ +N     
Sbjct: 84  ACDLSHSDAIAAFATGVLAAHGRCDVLVNNAGVGWFGGPLHTMKPAEWDALIAVNLKAPY 143
Query: 163 YTTR-FAVPHLRYTKGKIVVLSSAASWLTAPRMSFYNASKAALVLFFETLRVELGS-DVG 220
              R FA   +   +G I+ +SS A        + Y ASK  L     +   EL    V 
Sbjct: 144 LLLRAFAPAMIAAKRGHIINISSLAGKNPVADGAAYTASKWGLNGLMTSAAEELRQHQVR 203
Query: 221 VTIVTPGFIESELTQG 236
           V++V PG + +E   G
Sbjct: 204 VSLVAPGSVRTEFGVG 219

>pdb|1E6W|A Chain A, Rat Brain 3-Hydroxyacyl-Coa Dehydrogenase Binary Complex With Nadh And Estradiol Length = 260

Iteration: 1
 Score = 49.3 bits (116), Expect = 2e-06,   Method: Compositional matrix adjust.
 Identities = 49/203 (24%), Positives = 90/203 (44%), Gaps = 19/203 (9%)
Query: 45  VSGKVVIITGASSGIGEHLAYEYXXXXXXXXXXXXXEKSLEEVADTAREIGSPDVITIRA 104
           V G V +ITG +SG+G   A                    E     A+++G  + I   A
Sbjct: 7   VKGLVAVITGGASGLGLSTAKRLVGQGATAVLLDVPNSEGE---TEAKKLGG-NCIFAPA 62
Query: 105 DVSKVDDCRSLVEETMNHFGRLDHLVNNAGIS-SVALFEDIVN----ITDFKQIMNINFW 159
           +V+   + ++ +      FGR+D  VN AGI+ ++  + +  N    + DF++++N+N  
Sbjct: 63  NVTSEKEVQAALTLAKEKFGRIDVAVNCAGIAVAIKTYHEKKNQVHTLEDFQRVINVNLI 122
Query: 160 GSVYTTRFAV-------PHLRYTKGKIVVLSSAASWLTAPRMSFYNASKAALVLFFETLR 212
           G+    R          P     +G I+  +S A++      + Y+ASK  +V     + 
Sbjct: 123 GTFNVIRLVAGVMGQNEPDQGGQRGVIINTASVAAFEGQVGQAAYSASKGGIVGMTLPIA 182
Query: 213 VELGSDVGVTIVT--PGFIESEL 233
            +L + +G+ +VT  PG   + L
Sbjct: 183 RDL-APIGIRVVTIAPGLFATPL 204

>pdb|3TZQ|B Chain B, Crystal Structure Of A Short-Chain Type DehydrogenaseREDUCTASE FROM Mycobacterium Marinum Length = 271

Iteration: 1
 Score = 49.3 bits (116), Expect = 2e-06,   Method: Compositional matrix adjust.
 Identities = 49/195 (25%), Positives = 83/195 (42%), Gaps = 7/195 (3%)
Query: 41  FSEDVSGKVVIITGASSGIGEHLAYEYXXXXXXXXXXXXXEKSLEEVADTAREIGSPDVI 100
            + ++  KV IITGA  GIG   +                E  L   A +        V+
Sbjct: 5   MTAELENKVAIITGACGGIGLETSRVLARAGARVVLADLPETDLAGAAASVGRGAVHHVV 64
Query: 101 TIRADVSKVDDCRSLVEETMNHFGRLDHLVNNAGISSVA-LFEDIVNITDFKQIMNINFW 159
            +  +VS     R+L++ T++ FGRLD + NNA  S  A +    + +  +     +N  
Sbjct: 65  DLTNEVS----VRALIDFTIDTFGRLDIVDNNAAHSDPADMLVTQMTVDVWDDTFTVNAR 120
Query: 160 GSVYTTRFAVPHLRYTKGKIVVLSSAASWLTAPRMS-FYNASKAALVLFFETLRVELG-S 217
           G++   ++A+P L    G  +V  S+A+   A  MS  Y  +KAA+      +  + G  
Sbjct: 121 GTMLMCKYAIPRLISAGGGAIVNISSATAHAAYDMSTAYACTKAAIETLTRYVATQYGRH 180
Query: 218 DVGVTIVTPGFIESE 232
            V    + PG + + 
Sbjct: 181 GVRCNAIAPGLVRTP 195

>pdb|1E3S|A Chain A, Rat Brain 3-Hydroxyacyl-Coa Dehydrogenase Binary Complex With Nadh Length = 261

Iteration: 1
 Score = 49.3 bits (116), Expect = 2e-06,   Method: Compositional matrix adjust.
 Identities = 49/203 (24%), Positives = 90/203 (44%), Gaps = 19/203 (9%)
Query: 45  VSGKVVIITGASSGIGEHLAYEYXXXXXXXXXXXXXEKSLEEVADTAREIGSPDVITIRA 104
           V G V +ITG +SG+G   A                    E     A+++G  + I   A
Sbjct: 8   VKGLVAVITGGASGLGLSTAKRLVGQGATAVLLDVPNSEGE---TEAKKLGG-NCIFAPA 63
Query: 105 DVSKVDDCRSLVEETMNHFGRLDHLVNNAGIS-SVALFEDIVN----ITDFKQIMNINFW 159
           +V+   + ++ +      FGR+D  VN AGI+ ++  + +  N    + DF++++N+N  
Sbjct: 64  NVTSEKEVQAALTLAKEKFGRIDVAVNCAGIAVAIKTYHEKKNQVHTLEDFQRVINVNLI 123
Query: 160 GSVYTTRFAV-------PHLRYTKGKIVVLSSAASWLTAPRMSFYNASKAALVLFFETLR 212
           G+    R          P     +G I+  +S A++      + Y+ASK  +V     + 
Sbjct: 124 GTFNVIRLVAGVMGQNEPDQGGQRGVIINTASVAAFEGQVGQAAYSASKGGIVGMTLPIA 183
Query: 213 VELGSDVGVTIVT--PGFIESEL 233
            +L + +G+ +VT  PG   + L
Sbjct: 184 RDL-APIGIRVVTIAPGLFATPL 205

>pdb|1E3W|A Chain A, Rat Brain 3-Hydroxyacyl-Coa Dehydrogenase Binary Complex With Nadh And 3-Keto Butyrate Length = 261

Iteration: 1
 Score = 48.9 bits (115), Expect = 3e-06,   Method: Compositional matrix adjust.
 Identities = 49/203 (24%), Positives = 90/203 (44%), Gaps = 19/203 (9%)
Query: 45  VSGKVVIITGASSGIGEHLAYEYXXXXXXXXXXXXXEKSLEEVADTAREIGSPDVITIRA 104
           V G V +ITG +SG+G   A                    E     A+++G  + I   A
Sbjct: 8   VKGLVAVITGGASGLGLSTAKRLVGQGATAVLLDVPNSEGE---TEAKKLGG-NCIFAPA 63
Query: 105 DVSKVDDCRSLVEETMNHFGRLDHLVNNAGIS-SVALFEDIVN----ITDFKQIMNINFW 159
           +V+   + ++ +      FGR+D  VN AGI+ ++  + +  N    + DF++++N+N  
Sbjct: 64  NVTSEKEVQAALTLAKEKFGRIDVAVNCAGIAVAIKTYHEKKNQVHTLEDFQRVINVNLI 123
Query: 160 GSVYTTRFAV-------PHLRYTKGKIVVLSSAASWLTAPRMSFYNASKAALVLFFETLR 212
           G+    R          P     +G I+  +S A++      + Y+ASK  +V     + 
Sbjct: 124 GTFNVIRLVAGVMGQNEPDQGGQRGVIINTASVAAFEGQVGQAAYSASKGGIVGMTLPIA 183
Query: 213 VELGSDVGVTIVT--PGFIESEL 233
            +L + +G+ +VT  PG   + L
Sbjct: 184 RDL-APIGIRVVTIAPGLFATPL 205

>pdb|3F1L|A Chain A, The 0.95 A Structure Of An Oxidoreductase, Ycik From E.Coli Length = 252

Iteration: 1
 Score = 48.9 bits (115), Expect = 3e-06,   Method: Compositional matrix adjust.
 Identities = 45/199 (22%), Positives = 79/199 (39%), Gaps = 9/199 (4%)
Query: 48  KVVIITGASSGIGEHLAYEYXXXXXXXXXXXXXEKSLEEVA-----DTAREIGSPDVITI 102
           +++++TGAS GIG   A  Y             E+ L +VA     +T R+   P    +
Sbjct: 13  RIILVTGASDGIGREAAMTYARYGATVILLGRNEEKLRQVASHINEETGRQ---PQWFIL 69
Query: 103 RADVSKVDDCRSLVEETMNHFGRLDHLVNNAGISSVALFEDIVNITDFKQIMNINFWGS- 161
                  ++C+ L +    ++ RLD +++NAG+          N   ++ +M +N   + 
Sbjct: 70  DLLTCTSENCQQLAQRIAVNYPRLDGVLHNAGLLGDVCPMSEQNPQVWQDVMQVNVNATF 129
Query: 162 VYTTRFAVPHLRYTKGKIVVLSSAASWLTAPRMSFYNASKAALVLFFETLRVELGSDVGV 221
           + T       L+   G +V  SS+           Y ASK A     + L  E    + V
Sbjct: 130 MLTQALLPLLLKSDAGSLVFTSSSVGRQGRANWGAYAASKFATEGMMQVLADEYQQRLRV 189
Query: 222 TIVTPGFIESELTQGKFLT 240
             + PG   + +    F T
Sbjct: 190 NCINPGGTRTAMRASAFPT 208

>pdb|1SO8|A Chain A, Abeta-bound Human Abad Structure [also Known As 3-hydroxyacyl-coa Dehydrogenase Type Ii (type Ii Hadh), Endoplasmic Reticulum- Associated Amyloid Beta-peptide Binding Protein (erab)] Length = 261

Iteration: 1
 Score = 48.9 bits (115), Expect = 3e-06,   Method: Compositional matrix adjust.
 Identities = 47/203 (23%), Positives = 89/203 (43%), Gaps = 19/203 (9%)
Query: 45  VSGKVVIITGASSGIGEHLAYEYXXXXXXXXXXXXXEKSLEEVADTAREIGSPDVITIRA 104
           V G V +ITG +SG+G   A                    E     A+++G+ + +   A
Sbjct: 8   VKGLVAVITGGASGLGLATAERLVGQGASAVLLDLPNSGGEA---QAKKLGN-NCVFAPA 63
Query: 105 DVSKVDDCRSLVEETMNHFGRLDHLVNNAGISSVALFEDIVN-----ITDFKQIMNINFW 159
           DV+   D ++ +      FGR+D  VN AGI+  +   ++       + DF++++++N  
Sbjct: 64  DVTSEKDVQTALALAKGKFGRVDVAVNCAGIAVASKTYNLKKGQTHTLEDFQRVLDVNLM 123
Query: 160 GSVYTTRFAV-------PHLRYTKGKIVVLSSAASWLTAPRMSFYNASKAALVLFFETLR 212
           G+    R          P     +G I+  +S A++      + Y+ASK  +V     + 
Sbjct: 124 GTFNVIRLVAGEMGQNEPDQGGQRGVIINTASVAAFEGQVGQAAYSASKGGIVGMTLPIA 183
Query: 213 VELGSDVGVTIVT--PGFIESEL 233
            +L + +G+ ++T  PG   + L
Sbjct: 184 RDL-APIGIRVMTIAPGLFGTPL 205

>pdb|1U7T|A Chain A, Crystal Structure Of AbadHSD10 WITH A BOUND INHIBITOR Length = 261

Iteration: 1
 Score = 48.9 bits (115), Expect = 3e-06,   Method: Compositional matrix adjust.
 Identities = 47/203 (23%), Positives = 89/203 (43%), Gaps = 19/203 (9%)
Query: 45  VSGKVVIITGASSGIGEHLAYEYXXXXXXXXXXXXXEKSLEEVADTAREIGSPDVITIRA 104
           V G V +ITG +SG+G   A                    E     A+++G+ + +   A
Sbjct: 8   VKGLVAVITGGASGLGLATAERLVGQGASAVLLDLPNSGGEA---QAKKLGN-NCVFAPA 63
Query: 105 DVSKVDDCRSLVEETMNHFGRLDHLVNNAGISSVALFEDIVN-----ITDFKQIMNINFW 159
           DV+   D ++ +      FGR+D  VN AGI+  +   ++       + DF++++++N  
Sbjct: 64  DVTSEKDVQTALALAKGKFGRVDVAVNCAGIAVASKTYNLKKGQTHTLEDFQRVLDVNLM 123
Query: 160 GSVYTTRFAV-------PHLRYTKGKIVVLSSAASWLTAPRMSFYNASKAALVLFFETLR 212
           G+    R          P     +G I+  +S A++      + Y+ASK  +V     + 
Sbjct: 124 GTFNVIRLVAGEMGQNEPDQGGQRGVIINTASVAAFEGQVGQAAYSASKGGIVGMTLPIA 183
Query: 213 VELGSDVGVTIVT--PGFIESEL 233
            +L + +G+ ++T  PG   + L
Sbjct: 184 RDL-APIGIRVMTIAPGLFGTPL 205

>pdb|2O23|A Chain A, The Structure Of Wild-Type Human Hadh2 (17beta-Hydroxysteroid Dehydrogenase Type 10) Bound To Nad+ At 1.2 A Length = 265

Iteration: 1
 Score = 48.5 bits (114), Expect = 3e-06,   Method: Compositional matrix adjust.
 Identities = 47/203 (23%), Positives = 89/203 (43%), Gaps = 19/203 (9%)
Query: 45  VSGKVVIITGASSGIGEHLAYEYXXXXXXXXXXXXXEKSLEEVADTAREIGSPDVITIRA 104
           V G V +ITG +SG+G   A                    E     A+++G+ + +   A
Sbjct: 10  VKGLVAVITGGASGLGLATAERLVGQGASAVLLDLPNSGGEA---QAKKLGN-NCVFAPA 65
Query: 105 DVSKVDDCRSLVEETMNHFGRLDHLVNNAGISSVALFEDIVN-----ITDFKQIMNINFW 159
           DV+   D ++ +      FGR+D  VN AGI+  +   ++       + DF++++++N  
Sbjct: 66  DVTSEKDVQTALALAKGKFGRVDVAVNCAGIAVASKTYNLKKGQTHTLEDFQRVLDVNLM 125
Query: 160 GSVYTTRFAV-------PHLRYTKGKIVVLSSAASWLTAPRMSFYNASKAALVLFFETLR 212
           G+    R          P     +G I+  +S A++      + Y+ASK  +V     + 
Sbjct: 126 GTFNVIRLVAGEMGQNEPDQGGQRGVIINTASVAAFEGQVGQAAYSASKGGIVGMTLPIA 185
Query: 213 VELGSDVGVTIVT--PGFIESEL 233
            +L + +G+ ++T  PG   + L
Sbjct: 186 RDL-APIGIRVMTIAPGLFGTPL 207

>pdb|3I1J|A Chain A, Structure Of A Putative Short Chain Dehydrogenase From Pseudomonas Syringae Length = 247

Iteration: 1
 Score = 48.5 bits (114), Expect = 4e-06,   Method: Compositional matrix adjust.
 Identities = 55/195 (28%), Positives = 85/195 (43%), Gaps = 18/195 (9%)
Query: 39  SIFSEDVSGKVVIITGASSGIGEHLAYEYXXXXXXXXXXXXXEKSLEEVADTAREIGSPD 98
           S   E + G+V+++TGA+ GIG   A  Y             E SL EV+D  +  G P 
Sbjct: 6   SAHPELLKGRVILVTGAARGIGAAAARAYAAHGASVVLLGRTEASLAEVSDQIKSAGQPQ 65
Query: 99  --VITIRADVSKVDDCRSLVEETMNHFGRLDHLVNNAGISSVALFEDIVNITDFKQIMNI 156
             +I +  + +     R L     + FGRLD L++NA I       + +   DF Q+ ++
Sbjct: 66  PLIIALNLENATAQQYRELAARVEHEFGRLDGLLHNASIIGPRTPLEQLPDEDFXQVXHV 125
Query: 157 NFWGSVYTTRFAVPHLRYTKGKIVVLSSA-------ASWLTAPRMSFYNASKAALVLFFE 209
           N   +   TR  +P L+ ++   +  +S+       A+W        Y  SK A     +
Sbjct: 126 NVNATFXLTRALLPLLKRSEDASIAFTSSSVGRKGRANW------GAYGVSKFATEGLXQ 179
Query: 210 TLRVELGSDVGVTIV 224
           TL  EL    GVT V
Sbjct: 180 TLADEL---EGVTAV 191

>pdb|3L77|A Chain A, X-Ray Structure Alcohol Dehydrogenase From Archaeon Thermococcus Sibiricus Complexed With 5-Hydroxy-Nadp Length = 235

Iteration: 1
 Score = 48.5 bits (114), Expect = 4e-06,   Method: Compositional matrix adjust.
 Identities = 48/184 (26%), Positives = 78/184 (42%), Gaps = 2/184 (1%)
Query: 48  KVVIITGASSGIGEHLAYEYXXXXXXXXXXXXXEKSLEEVADTAREIGSPDVITIRADVS 107
           KV +ITGAS GIGE +A                   LE++A    +    +V     DVS
Sbjct: 3   KVAVITGASRGIGEAIARALARDGYALALGARSVDRLEKIAHELMQEQGVEVFYHHLDVS 62
Query: 108 KVDDCRSLVEETMNHFGRLDHLVNNAGISSVALFEDIVNITDFKQIMNINFWGSVYTTRF 167
           K +      ++ +  FG +D +V NAG+      E++      + I  +N  G   T + 
Sbjct: 63  KAESVEEFSKKVLERFGDVDVVVANAGLGYFKRLEELSEEEFHEMI-EVNLLGVWRTLKA 121
Query: 168 AVPHLRYTKGKIVVLSSAASWLTAPRMSFYNASKAALVLFFETLRVELGSDVGVTIVTPG 227
            +  L+ T G  +V +S  S    P    Y ++K A      T ++E   DV    + PG
Sbjct: 122 FLDSLKRTGGLALVTTSDVSARLIPYGGGYVSTKWAARALVRTFQIE-NPDVRFFELRPG 180
Query: 228 FIES 231
            +++
Sbjct: 181 AVDT 184

>pdb|3TN7|A Chain A, Crystal Structure Of Short-Chain Alcohol Dehydrogenase From Hyperthermophilic Archaeon Thermococcus Sibiricus Complexed With 5- Hydroxy-Nadp Length = 257

Iteration: 1
 Score = 48.1 bits (113), Expect = 4e-06,   Method: Compositional matrix adjust.
 Identities = 48/184 (26%), Positives = 78/184 (42%), Gaps = 2/184 (1%)
Query: 48  KVVIITGASSGIGEHLAYEYXXXXXXXXXXXXXEKSLEEVADTAREIGSPDVITIRADVS 107
           KV +ITGAS GIGE +A                   LE++A    +    +V     DVS
Sbjct: 25  KVAVITGASRGIGEAIARALARDGYALALGARSVDRLEKIAHELMQEQGVEVFYHHLDVS 84
Query: 108 KVDDCRSLVEETMNHFGRLDHLVNNAGISSVALFEDIVNITDFKQIMNINFWGSVYTTRF 167
           K +      ++ +  FG +D +V NAG+      E++      + I  +N  G   T + 
Sbjct: 85  KAESVEEFSKKVLERFGDVDVVVANAGLGYFKRLEELSEEEFHEMI-EVNLLGVWRTLKA 143
Query: 168 AVPHLRYTKGKIVVLSSAASWLTAPRMSFYNASKAALVLFFETLRVELGSDVGVTIVTPG 227
            +  L+ T G  +V +S  S    P    Y ++K A      T ++E   DV    + PG
Sbjct: 144 FLDSLKRTGGLALVTTSDVSARLIPYGGGYVSTKWAARALVRTFQIE-NPDVRFFELRPG 202
Query: 228 FIES 231
            +++
Sbjct: 203 AVDT 206

>pdb|3QLJ|A Chain A, Crystal Structure Of A Short Chain Dehydrogenase From Mycobacterium Avium Length = 322

Iteration: 1
 Score = 48.1 bits (113), Expect = 4e-06,   Method: Compositional matrix adjust.
 Identities = 49/196 (25%), Positives = 78/196 (39%), Gaps = 20/196 (10%)
Query: 45  VSGKVVIITGASSGIGEHLAYEYXXXXXXX----------XXXXXXEKSLEEVADTAREI 94
           V G+VVI+TGA  GIG   A  +                         + + V D     
Sbjct: 25  VDGRVVIVTGAGGGIGRAHALAFAAEGARVVVNDIGVGLDGSPASGGSAAQSVVDEITAA 84
Query: 95  GSPDVITIRADVSKVDDCRSLVEETMNHFGRLDHLVNNAGISSVALFEDIVNITDFKQIM 154
           G  + +   ++V+  D    L++  +  FG LD LVNNAGI    +  +     +F  ++
Sbjct: 85  GG-EAVADGSNVADWDQAAGLIQTAVETFGGLDVLVNNAGIVRDRMIANTSE-EEFDAVI 142
Query: 155 NINFWGSVYTTRFAVPHLR-------YTKGKIVVLSSAASWLTAPRMSFYNASKAALVLF 207
            ++  G   T R A  + R          G+I+  SS A    +     Y+A+KA +   
Sbjct: 143 AVHLKGHFATMRHAAAYWRGLSKAGKAVDGRIINTSSGAGLQGSVGQGNYSAAKAGIATL 202
Query: 208 FETLRVELGSDVGVTI 223
                 E+G   GVT+
Sbjct: 203 TLVGAAEMGR-YGVTV 217

>pdb|4IIN|A Chain A, Crystal Structure Of A Putative 3-Oxoacyl-[acyl-Carrier Protein]reductase From Helicobacter Pylori 26695 Complexed With Nad+ Length = 271

Iteration: 1
 Score = 47.8 bits (112), Expect = 6e-06,   Method: Compositional matrix adjust.
 Identities = 50/193 (25%), Positives = 85/193 (44%), Gaps = 9/193 (4%)
Query: 46  SGKVVIITGASSGIGEHLAYEYXXXXXXXXXXXXXEKSLEEVADTAR---EIGSPDVITI 102
           +GK V+ITGAS GIG  +A                 +S  EVAD  +   E        I
Sbjct: 28  TGKNVLITGASKGIGAEIA---KTLASMGLKVWINYRSNAEVADALKNELEEKGYKAAVI 84
Query: 103 RADVSKVDDCRSLVEETMNHFGRLDHLVNNAGISSVALFEDIVNITDFKQIMNINFWGSV 162
           + D +   D    ++  +   G L +LVNNAG+    L   +    DF  +++ N   + 
Sbjct: 85  KFDAASESDFIEAIQTIVQSDGGLSYLVNNAGVVRDKLAIKM-KTEDFHHVIDNNLTSAF 143
Query: 163 YTTRFAVPHLRYTK-GKIVVLSSAASWLTAPRMSFYNASKAALVLFFETLRVELG-SDVG 220
              R A+  +  ++ G +V ++S          + Y+ASK  ++   ++   E    ++ 
Sbjct: 144 IGCREALKVMSKSRFGSVVNVASIIGERGNMGQTNYSASKGGMIAMSKSFAYEGALRNIR 203
Query: 221 VTIVTPGFIESEL 233
              VTPGFIE+++
Sbjct: 204 FNSVTPGFIETDM 216

>pdb|3SJU|A Chain A, Hedamycin Polyketide Ketoreductase Bound To Nadph Length = 279

Iteration: 1
 Score = 47.4 bits (111), Expect = 7e-06,   Method: Compositional matrix adjust.
 Identities = 49/193 (25%), Positives = 84/193 (43%), Gaps = 8/193 (4%)
Query: 48  KVVIITGASSGIGEHLAYEYXXXXXXXXXXXXXEKSLEEVADTAREIGSPDVITIRADVS 107
           +   +TG SSGIG  +A                 K++    D  R  G  DV     DV+
Sbjct: 25  QTAFVTGVSSGIGLAVARTLAARGIAVYGCARDAKNVSAAVDGLRAAGH-DVDGSSCDVT 83
Query: 108 KVDDCRSLVEETMNHFGRLDHLVNNAGISSVALFEDIVNITDFKQIMNINFWGSVYTTR- 166
             D+  + V   +  FG +  LVN+AG +      D+ +   +  +++ N  G    TR 
Sbjct: 84  STDEVHAAVAAAVERFGPIGILVNSAGRNGGGETADLDDAL-WADVLDTNLTGVFRVTRE 142
Query: 167 -FAVPHLRYTK-GKIVVLSSAASWLTAPRMSFYNASKAALVLFFETLRVELGSDVGVTI- 223
                 +R    G+IV ++S          + Y ASK  +V F +++  EL +  G+T+ 
Sbjct: 143 VLRAGGMREAGWGRIVNIASTGGKQGVMYAAPYTASKHGVVGFTKSVGFEL-AKTGITVN 201
Query: 224 -VTPGFIESELTQ 235
            V PG++E+ + +
Sbjct: 202 AVCPGYVETPMAE 214

>pdb|3GDF|A Chain A, Crystal Structure Of The Nadp-Dependent Mannitol Dehydrogenase From Cladosporium Herbarum. Length = 267

Iteration: 1
 Score = 47.0 bits (110), Expect = 1e-05,   Method: Compositional matrix adjust.
 Identities = 40/196 (20%), Positives = 85/196 (43%), Gaps = 7/196 (3%)
Query: 45  VSGKVVIITGASSGIGEHLAYEYXXXXXXXXXXXXXEKSLEEVADTAREIGSPDVITIRA 104
           + GKVV++TGAS   G  +                     +   +  +E+     I  +A
Sbjct: 18  LKGKVVVVTGASGPKGMGIEAARGCAEMGAAVAITYASRAQGAEENVKELEKTYGIKAKA 77
Query: 105 DVSKVDD---CRSLVEETMNHFGRLDHLVNNAGISSVALFEDIVNITDFKQIMNINFWGS 161
              +VD    C  LV++ +  FG++D  + NAG ++ +   D  ++  +  ++ ++  G+
Sbjct: 78  YKCQVDSYESCEKLVKDVVADFGQIDAFIANAGATADSGILD-GSVEAWNHVVQVDLNGT 136
Query: 162 VYTTRFAVPHLR-YTKGKIVVLSSAASWLT--APRMSFYNASKAALVLFFETLRVELGSD 218
            +  +    H +    G +V+ +S +  +       + YN +KA  +    +L  E    
Sbjct: 137 FHCAKAVGHHFKERGTGSLVITASMSGHIANFPQEQTSYNVAKAGCIHMARSLANEWRDF 196
Query: 219 VGVTIVTPGFIESELT 234
             V  ++PG+I++ L+
Sbjct: 197 ARVNSISPGYIDTGLS 212

>pdb|1PR9|A Chain A, Human L-Xylulose Reductase Holoenzyme Length = 244

Iteration: 1
 Score = 46.6 bits (109), Expect = 1e-05,   Method: Compositional matrix adjust.
 Identities = 47/199 (23%), Positives = 82/199 (41%), Gaps = 17/199 (8%)
Query: 45  VSGKVVIITGASSGIGEHLAYEYXXXXXXXXXXXXXEKSLEEVADTAREIGSPDVITIRA 104
           ++G+ V++TGA  GIG                    +  L+ +    RE   P +  +  
Sbjct: 5   LAGRRVLVTGAGKGIGRGTVQALHATGARVVAVSRTQADLDSL---VRE--CPGIEPVCV 59
Query: 105 DVSKVDDCRSLVEETMNHFGRLDHLVNNAGISSVALFEDIVNITD--FKQIMNINFWGSV 162
           D+   +      E  +   G +D LVNNA   +VAL +  + +T   F +   +N    +
Sbjct: 60  DLGDWEA----TERALGSVGPVDLLVNNA---AVALLQPFLEVTKEAFDRSFEVNLRAVI 112
Query: 163 YTTRFAVPHL--RYTKGKIVVLSSAASWLTAPRMSFYNASKAALVLFFETLRVELGS-DV 219
             ++     L  R   G IV +SS  S       S Y ++K AL +  + + +ELG   +
Sbjct: 113 QVSQIVARGLIARGVPGAIVNVSSQCSQRAVTNHSVYCSTKGALDMLTKVMALELGPHKI 172
Query: 220 GVTIVTPGFIESELTQGKF 238
            V  V P  + + + Q  +
Sbjct: 173 RVNAVNPTVVMTSMGQATW 191

>pdb|3EDM|A Chain A, Crystal Structure Of A Short Chain Dehydrogenase From Agrobacterium Tumefaciens Length = 259

Iteration: 1
 Score = 45.8 bits (107), Expect = 2e-05,   Method: Compositional matrix adjust.
 Identities = 36/135 (26%), Positives = 63/135 (46%), Gaps = 6/135 (4%)
Query: 100 ITIRADVSKVDDCRSLVEETMNHFGRLDHLVNNAG--ISSVALFEDIVNITDFKQIMNIN 157
           + I+AD++   +  + +    + FG +  LV+ AG  I+   + E  ++   + Q++++N
Sbjct: 61  LAIKADLTNAAEVEAAISAAADKFGEIHGLVHVAGGLIARKTIAE--MDEAFWHQVLDVN 118
Query: 158 FWGSVYTTRFAVPHLRYTKGKIVVLSSAASW-LTAPRMSFYNASKAALVLFFETLRVELG 216
                 T + A+P +    G IV  SS A      P    Y  SK A++ F   L  E+G
Sbjct: 119 LTSLFLTAKTALPKM-AKGGAIVTFSSQAGRDGGGPGALAYATSKGAVMTFTRGLAKEVG 177
Query: 217 SDVGVTIVTPGFIES 231
             + V  V PG I +
Sbjct: 178 PKIRVNAVCPGMIST 192

>pdb|3D3W|A Chain A, Structure Of L-Xylulose Reductase With Bound Coenzyme, Phosphate And Hydroxide Length = 244

Iteration: 1
 Score = 45.8 bits (107), Expect = 2e-05,   Method: Compositional matrix adjust.
 Identities = 47/199 (23%), Positives = 82/199 (41%), Gaps = 17/199 (8%)
Query: 45  VSGKVVIITGASSGIGEHLAYEYXXXXXXXXXXXXXEKSLEEVADTAREIGSPDVITIRA 104
           ++G+ V++TGA  GIG                    +  L+ +    RE   P +  +  
Sbjct: 5   LAGRRVLVTGAGKGIGRGTVQALHATGARVVAVSRTQADLDSL---VRE--CPGIEPVCV 59
Query: 105 DVSKVDDCRSLVEETMNHFGRLDHLVNNAGISSVALFEDIVNITD--FKQIMNINFWGSV 162
           D+   +      E  +   G +D LVNNA   +VAL +  + +T   F +   +N    +
Sbjct: 60  DLGDWEA----TERALGSVGPVDLLVNNA---AVALLQPFLEVTKEAFDRSFEVNLRAVI 112
Query: 163 YTTRFAVPHL--RYTKGKIVVLSSAASWLTAPRMSFYNASKAALVLFFETLRVELGS-DV 219
             ++     L  R   G IV +SS  S       S Y ++K AL +  + + +ELG   +
Sbjct: 113 QVSQIVARGLIARGVPGAIVNVSSQXSQRAVTNHSVYCSTKGALDMLTKVMALELGPHKI 172
Query: 220 GVTIVTPGFIESELTQGKF 238
            V  V P  + + + Q  +
Sbjct: 173 RVNAVNPTVVMTSMGQATW 191

>pdb|2WDZ|A Chain A, Crystal Structure Of The Short Chain Dehydrogenase Galactitol-Dehydrogenase (Gatdh) Of Rhodobacter Sphaeroides In Complex With Nad+ And 1,2-Pentandiol Length = 254

Iteration: 1
 Score = 45.4 bits (106), Expect = 3e-05,   Method: Compositional matrix adjust.
 Identities = 55/204 (26%), Positives = 89/204 (43%), Gaps = 15/204 (7%)
Query: 37  FNSIFSEDVSGKVVIITGASSGIGEHLAYEYXXXXXXXXXXXXXEKSLEEVADTAREIGS 96
           + ++F  D  G    +TGA SGIG  +   +               +L+     A+E+G+
Sbjct: 3   YRTVFRLD--GACAAVTGAGSGIGLEICRAFAASGARLILIDREAAALDR---AAQELGA 57
Query: 97  PDVITIRADVSKVDDCRSLVEETMNHFGRLDHLVNNAGISSVALFEDIVNITD--FKQIM 154
                I ADV+  +   +   E       +  LVN+AGI   A   D +   D  ++Q+M
Sbjct: 58  AVAARIVADVTDAEAMTAAAAEAEAVA-PVSILVNSAGI---ARLHDALETDDATWRQVM 113
Query: 155 NINFWGSVYTTR-FAVPHLRYTKGKIVVLSS-AASWLTAPRM-SFYNASKAALVLFFETL 211
            +N  G  + +R F    +    G IV L S + + +  P+  S Y ASK A+      L
Sbjct: 114 AVNVDGMFWASRAFGRAMVARGAGAIVNLGSMSGTIVNRPQFASSYMASKGAVHQLTRAL 173
Query: 212 RVEL-GSDVGVTIVTPGFIESELT 234
             E  G  V V  + PG++ +E+T
Sbjct: 174 AAEWAGRGVRVNALAPGYVATEMT 197

>pdb|3G1T|A Chain A, Crystal Structure Of Short Chain Dehydrogenase From Salmonella Enterica Subsp. Enterica Serovar Typhi Str. Ct18 Length = 258

Iteration: 1
 Score = 45.1 bits (105), Expect = 4e-05,   Method: Compositional matrix adjust.
 Identities = 24/93 (25%), Positives = 42/93 (45%), Gaps = 2/93 (2%)
Query: 45  VSGKVVIITGASSGIGEHLAYEYXXXXXXXXXXXXXEKSLEEVAD--TAREIGSPDVITI 102
           +  +++++TGAS GIG   A  Y             E+ L  VA      +   P   T+
Sbjct: 12  LQNRIILVTGASDGIGREAALTYARYGATVILLGRNEEKLRRVAQHIADEQHVQPQWFTL 71
Query: 103 RADVSKVDDCRSLVEETMNHFGRLDHLVNNAGI 135
                  ++CR + +    H+ RLD +++NAG+
Sbjct: 72  DLLTCTAEECRQVADRIAAHYPRLDGVLHNAGL 104

>pdb|3KVO|A Chain A, Crystal Structure Of The Catalytic Domain Of Human Hydroxysteroid Dehydrogenase Like 2 (Hsdl2) Length = 346

Iteration: 1
 Score = 44.7 bits (104), Expect = 5e-05,   Method: Compositional matrix adjust.
 Identities = 40/140 (28%), Positives = 64/140 (45%), Gaps = 11/140 (7%)
Query: 45  VSGKVVIITGASSGIGEHLAYEYXXXXX----XXXXXXXXEKSLEEVADTAREI---GSP 97
           ++G  V ITGAS GIG+ +A +                   K L  +   A EI   G  
Sbjct: 43  LAGCTVFITGASRGIGKAIALKAAKDGANIVIAAKTAQPHPKLLGTIYTAAEEIEAVGGK 102
Query: 98  DVITIRADVSKVDDCRSLVEETMNHFGRLDHLVNNAGISSVALFEDIVNITD-FKQIMNI 156
            +  I  DV       + VE+ +  FG +D LVNNA  S+++L   +   T     +MN+
Sbjct: 103 ALPCI-VDVRDEQQISAAVEKAIKKFGGIDILVNNA--SAISLTNTLDTPTKRLDLMMNV 159
Query: 157 NFWGSVYTTRFAVPHLRYTK 176
           N  G+   ++  +P+L+ +K
Sbjct: 160 NTRGTYLASKACIPYLKKSK 179

>pdb|3A28|C Chain C, Crystal Structure Of L-2,3-Butanediol Dehydrogenase Length = 258

Iteration: 1
 Score = 44.7 bits (104), Expect = 5e-05,   Method: Compositional matrix adjust.
 Identities = 43/161 (26%), Positives = 75/161 (46%), Gaps = 6/161 (3%)
Query: 48  KVVIITGASSGIGEHLAYEYXXXXXXXXXXXXXEKSLEEVADTAREIGSPD--VITIRAD 105
           KV ++TG + GIG  ++ E               +  E+ A+T + I + D   + +  D
Sbjct: 3   KVAMVTGGAQGIGRGIS-EKLAADGFDIAVADLPQQEEQAAETIKLIEAADQKAVFVGLD 61
Query: 106 VSKVDDCRSLVEETMNHFGRLDHLVNNAGISSVALFEDIVNITDFKQIMNINFWGSVYTT 165
           V+   +  S ++E     G  D LVNNAGI+ +    ++    D KQI ++N +   +  
Sbjct: 62  VTDKANFDSAIDEAAEKLGGFDVLVNNAGIAQIKPLLEVTE-EDLKQIYSVNVFSVFFGI 120
Query: 166 RFAVPHLRY--TKGKIVVLSSAASWLTAPRMSFYNASKAAL 204
           + A         KGKI+  +S A+    P +S Y+ +K A+
Sbjct: 121 QAASRKFDELGVKGKIINAASIAAIQGFPILSAYSTTKFAV 161

>pdb|3OIC|A Chain A, Crystal Structure Of Enoyl-Acp Reductases Iii (Fabl) From B. Subtilis (Apo Form) Length = 258

Iteration: 1
 Score = 44.7 bits (104), Expect = 5e-05,   Method: Compositional matrix adjust.
 Identities = 54/210 (25%), Positives = 90/210 (42%), Gaps = 16/210 (7%)
Query: 48  KVVIITGASSGIGEHLAYEYXXXXXXXXXX-XXXEKSLEEVADTAREIGSPDVITIRADV 106
           K  ++TG+S G+G+  A                 +K+  E A+   ++G   V+ ++A+V
Sbjct: 5   KCALVTGSSRGVGKAAAIRLAENGYNIVINYARSKKAALETAEEIEKLGVK-VLVVKANV 63
Query: 107 SKVDDCRSLVEETMNHFGRLDHLVNNAG---ISSVALFEDIVNITDFKQIMNINFWGSVY 163
            +    + + ++    FGRLD  VNNA    +  V   E+    T +   MNIN    ++
Sbjct: 64  GQPAKIKEMFQQIDETFGRLDVFVNNAASGVLRPVMELEE----THWDWTMNINAKALLF 119
Query: 164 TTRFAVPHL-RYTKGKIVVLSSAASWLTAPRMSFYNASKAALVLFFETLRVELG-SDVGV 221
             + A   + +   G IV +SS  S       +    SKAAL      L VEL    + V
Sbjct: 120 CAQEAAKLMEKNGGGHIVSISSLGSIRYLENYTTVGVSKAALEALTRYLAVELSPKQIIV 179
Query: 222 TIVTPGFIESEL-----TQGKFLTGRRQNS 246
             V+ G I+++       +   L   RQN+
Sbjct: 180 NAVSGGAIDTDALKHFPNREDLLEDARQNT 209

>pdb|3IAH|A Chain A, Crystal Structure Of Short Chain Dehydrogenase (ycik) From Salmonella Enterica Subsp. Enterica Serovar Typhimurium Str. Lt2 In Complex With Nadp And Acetate. Length = 256

Iteration: 1
 Score = 44.3 bits (103), Expect = 7e-05,   Method: Compositional matrix adjust.
 Identities = 24/93 (25%), Positives = 42/93 (45%), Gaps = 2/93 (2%)
Query: 45  VSGKVVIITGASSGIGEHLAYEYXXXXXXXXXXXXXEKSLEEVAD--TAREIGSPDVITI 102
           +  +++++TGAS GIG   A  Y             E+ L  VA      +   P   T+
Sbjct: 13  LQNRIILVTGASDGIGREAALTYARYGATVILLGRNEEKLRRVAQHIADEQHVQPQWFTL 72
Query: 103 RADVSKVDDCRSLVEETMNHFGRLDHLVNNAGI 135
                  ++CR + +    H+ RLD +++NAG+
Sbjct: 73  DLLTCTAEECRQVADRIAAHYPRLDGVLHNAGL 105

>pdb|4E4Y|A Chain A, The Crystal Structure Of A Short Chain Dehydrogenase Family Protein From Francisella Tularensis Subsp. Tularensis Schu S4 Length = 244

Iteration: 1
 Score = 43.9 bits (102), Expect = 9e-05,   Method: Compositional matrix adjust.
 Identities = 36/146 (24%), Positives = 70/146 (47%), Gaps = 5/146 (3%)
Query: 89  DTAREIGSPDVITIRADVSKVDDCRSLVEETMNHFGRLDHLVNNAGISSVALFEDIVNIT 148
           D  +   + ++  I+AD++K  D  ++++   N     D +  NAGI       DI +I 
Sbjct: 36  DIQQSFSAENLKFIKADLTKQQDITNVLDIIKNV--SFDGIFLNAGILIKGSIFDI-DIE 92
Query: 149 DFKQIMNINFWGSVYTTRFAVPHLRYTKGKIVVLSSAASWLTAPRMSFYNASKAALVLFF 208
             K+++++N W S+Y  +    +L+     IV   S   ++  P    Y  SK A+    
Sbjct: 93  SIKKVLDLNVWSSIYFIKGLENNLK-VGASIVFNGSDQCFIAKPNSFAYTLSKGAIAQXT 151
Query: 209 ETLRVELGS-DVGVTIVTPGFIESEL 233
           ++L ++L    + V  V PG ++++L
Sbjct: 152 KSLALDLAKYQIRVNTVCPGTVDTDL 177

>pdb|3AWD|A Chain A, Crystal Structure Of Gox2181 Length = 260

Iteration: 1
 Score = 43.5 bits (101), Expect = 1e-04,   Method: Compositional matrix adjust.
 Identities = 51/194 (26%), Positives = 83/194 (42%), Gaps = 9/194 (4%)
Query: 48  KVVIITGASSGIGEHLAYEYXXXXXXXXXXXXXEKSLEEVADTAREIGSPDVITIRADVS 107
           +V I+TG +  IG                    E    +  +  R  G  DV ++  DV+
Sbjct: 14  RVAIVTGGAQNIGLACVTALAEAGARVIIADLDEAMATKAVEDLRMEGH-DVSSVVMDVT 72
Query: 108 KVDDCRSLVEETMNHFGRLDHLVNNAGIS-SVALFEDIVNITDFKQIMNINFWGSVYTTR 166
             +  ++ V       GR+D LV  AGI  S    ED+ +    KQ+ +IN  G ++ + 
Sbjct: 73  NTESVQNAVRSVHEQEGRVDILVACAGICISEVKAEDMTDGQWLKQV-DINLNG-MFRSC 130
Query: 167 FAVPH--LRYTKGKIVVLSSAASWLT--APRMSFYNASKAALVLFFETLRVELGSD-VGV 221
            AV    L   +G IV + S +  +     + + YNASKA +  +  +L  E     +  
Sbjct: 131 QAVGRIMLEQKQGVIVAIGSMSGLIVNRPQQQAAYNASKAGVHQYIRSLAAEWAPHGIRA 190
Query: 222 TIVTPGFIESELTQ 235
             V P +IE+ LT+
Sbjct: 191 NAVAPTYIETTLTR 204

>pdb|3E9N|A Chain A, Crystal Structure Of A Putative Short-Chain DehydrogenaseREDUCTASE FROM CORYNEBACTERIUM GLUTAMICUM Length = 245

Iteration: 1
 Score = 43.1 bits (100), Expect = 2e-04,   Method: Compositional matrix adjust.
 Identities = 48/205 (23%), Positives = 91/205 (44%), Gaps = 40/205 (19%)
Query: 48  KVVIITGASSGIGEHLAYEYXXXXXXXXXXXXXEKSLEEVADTARE-----IG-SPDVIT 101
           K+ ++TGA+ G+G                       +E V D +R+     +G +P+ + 
Sbjct: 6   KIAVVTGATGGMG-----------------------IEIVKDLSRDHIVYALGRNPEHLA 42
Query: 102 IRADVSKVDDCRS-LVEETMNHFG-----RLDH---LVNNAGISSVALFEDIVNITDFKQ 152
             A++  V+   S +V+E +   G      LDH   LV+ A ++     E   ++ ++  
Sbjct: 43  ALAEIEGVEPIESDIVKEVLEEGGVDKLKNLDHVDTLVHAAAVARDTTIE-AGSVAEWHA 101
Query: 153 IMNINFWGSVYTTRFAVPHLRYTKGKIVVLSSAASWLTAPRMSFYNASKAALVLFFETLR 212
            +++N       +R  +P LR   G ++ ++S A     P  + Y ASK AL    +  R
Sbjct: 102 HLDLNVIVPAELSRQLLPALRAASGCVIYINSGAGNGPHPGNTIYAASKHALRGLADAFR 161
Query: 213 VELGSD-VGVTIVTPGFIESELTQG 236
            E  ++ + V+ V+PG   + + QG
Sbjct: 162 KEEANNGIRVSTVSPGPTNTPMLQG 186

>pdb|4HP8|A Chain A, Crystal Structure Of A Putative 2-Deoxy-D-Gluconate 3-Dehydrogenase From Agrobacterium Tumefaciens (Target Efi-506435) With Bound Nadp Length = 247

Iteration: 1
 Score = 42.7 bits (99), Expect = 2e-04,   Method: Compositional matrix adjust.
 Identities = 48/197 (24%), Positives = 88/197 (44%), Gaps = 18/197 (9%)
Query: 45  VSGKVVIITGASSGIGEHLAYEYXXXXXXXXXXXXXEKSLEEVAD-TAREIGSPDVITIR 103
           + G+  ++TGA++G+G+ +A                 ++ +E  D  A++ G+   + I 
Sbjct: 7   LEGRKALVTGANTGLGQAIAVGL--AAAGAEVVCAARRAPDETLDIIAKDGGNASALLI- 63
Query: 104 ADVSKVDDCRSLVEETMNHFGRLDHLVNNAGISSVALFEDIVNIT--DFKQIMNINFWGS 161
                 D    L  +        D LVNNAGI   A   D V  +  D+ ++M++N    
Sbjct: 64  ------DFADPLAAKDSFTDAGFDILVNNAGIIRRA---DSVEFSELDWDEVMDVNLKAL 114
Query: 162 VYTTRFAVPHL--RYTKGKIVVLSSAASWLTAPRMSFYNASKAALVLFFETLRVELGSD- 218
            +TT+     L  +   GK+V ++S  S+    R+  Y A+K  +    + L  E  +  
Sbjct: 115 FFTTQAFAKELLAKGRSGKVVNIASLLSFQGGIRVPSYTAAKHGVAGLTKLLANEWAAKG 174
Query: 219 VGVTIVTPGFIESELTQ 235
           + V  + PG+IE+  T+
Sbjct: 175 INVNAIAPGYIETNNTE 191

>pdb|3F1K|A Chain A, Crystal Structure Of Ycik From E. Coli, An Oxidoreductase, Complexed With Nadp+ At 2.6a Resolution Length = 252

Iteration: 1
 Score = 42.7 bits (99), Expect = 2e-04,   Method: Compositional matrix adjust.
 Identities = 44/199 (22%), Positives = 77/199 (38%), Gaps = 9/199 (4%)
Query: 48  KVVIITGASSGIGEHLAYEYXXXXXXXXXXXXXEKSLEEVA-----DTAREIGSPDVITI 102
           +++++TGAS GIG   A  Y             E+ L +VA     +T R+   P    +
Sbjct: 13  RIILVTGASDGIGREAAXTYARYGATVILLGRNEEKLRQVASHINEETGRQ---PQWFIL 69
Query: 103 RADVSKVDDCRSLVEETMNHFGRLDHLVNNAGISSVALFEDIVNITDFKQIMNINFWGS- 161
                  ++C+ L +    ++ RLD +++NAG+          N   ++ +  +N   + 
Sbjct: 70  DLLTCTSENCQQLAQRIAVNYPRLDGVLHNAGLLGDVCPXSEQNPQVWQDVXQVNVNATF 129
Query: 162 VYTTRFAVPHLRYTKGKIVVLSSAASWLTAPRMSFYNASKAALVLFFETLRVELGSDVGV 221
             T       L+   G +V  SS+           Y ASK A     + L  E    + V
Sbjct: 130 XLTQALLPLLLKSDAGSLVFTSSSVGRQGRANWGAYAASKFATEGXXQVLADEYQQRLRV 189
Query: 222 TIVTPGFIESELTQGKFLT 240
             + PG   + +    F T
Sbjct: 190 NCINPGGTRTAMRASAFPT 208

>pdb|4G81|D Chain D, Crystal Structure Of A Hexonate Dehydrogenase Ortholog (Target Efi- 506402 From Salmonella Enterica, Unliganded Structure Length = 255

Iteration: 1
 Score = 42.7 bits (99), Expect = 2e-04,   Method: Compositional matrix adjust.
 Identities = 44/202 (21%), Positives = 87/202 (43%), Gaps = 23/202 (11%)
Query: 44  DVSGKVVIITGASSGIGEHLAYEYXXXXXXXXXXXXXEKSLEEVADTAREIGS------- 96
           D++GK  ++TG++ G+G   A                   L E  DT    G        
Sbjct: 6   DLTGKTALVTGSARGLGFAYAEGLAAAGARVILNDIRATLLAESVDTLTRKGYDAHGVAF 65
Query: 97  --PDVITIRADVSKVDDCRSLVEETMNHFGRLDHLVNNAGISSVALFEDIVNITDFKQIM 154
              D + I A  SK+D       E ++    +D L+NNAGI       ++  + ++++++
Sbjct: 66  DVTDELAIEAAFSKLD------AEGIH----VDILINNAGIQYRKPMVEL-ELENWQKVI 114
Query: 155 NINFWGSVYTTRFAVPHL--RYTKGKIVVLSSAASWLTAPRMSFYNASKAALVLFFETLR 212
           + N   +   +R A   +  R + GKI+ + S  S    P ++ Y A+K  + +   ++ 
Sbjct: 115 DTNLTSAFLVSRSAAKRMIARNSGGKIINIGSLTSQAARPTVAPYTAAKGGIKMLTCSMA 174
Query: 213 VELGS-DVGVTIVTPGFIESEL 233
            E    ++    + PG+I +++
Sbjct: 175 AEWAQFNIQTNAIGPGYILTDM 196

>pdb|3E9Q|A Chain A, Crystal Structure Of The Short Chain Dehydrogenase From Shigella Flexneri Length = 273

Iteration: 1
 Score = 42.7 bits (99), Expect = 2e-04,   Method: Compositional matrix adjust.
 Identities = 45/199 (22%), Positives = 77/199 (38%), Gaps = 9/199 (4%)
Query: 48  KVVIITGASSGIGEHLAYEYXXXXXXXXXXXXXEKSLEEVA-----DTAREIGSPDVITI 102
           +++++TGAS GIG   A  Y             E+ L +VA     +T R+   P    +
Sbjct: 34  RIILVTGASDGIGREAAXTYARYGATVILLGRNEEKLRQVASHINEETGRQ---PQWFIL 90
Query: 103 RADVSKVDDCRSLVEETMNHFGRLDHLVNNAGISSVALFEDIVNITDFKQIMNINFWGS- 161
                  ++C+ L +  + ++ RLD +++NAG+          N   ++ +  IN   + 
Sbjct: 91  DLLTCTSENCQQLAQRIVVNYPRLDGVLHNAGLLGDVCPXSEQNPQVWQDVXQINVNATF 150
Query: 162 VYTTRFAVPHLRYTKGKIVVLSSAASWLTAPRMSFYNASKAALVLFFETLRVELGSDVGV 221
             T       L+   G +V  SS+           Y ASK A     + L  E    + V
Sbjct: 151 XLTQALLPLLLKSDAGSLVFTSSSVGRQGRANWGAYAASKFATEGXXQVLADEYQQRLRV 210
Query: 222 TIVTPGFIESELTQGKFLT 240
             + PG   +      F T
Sbjct: 211 NCINPGGTRTAXRASAFPT 229

>pdb|3NYW|A Chain A, Crystal Structure Of A Betaketoacyl-[acp] Reductase (Fabg) From Bacteroides Thetaiotaomicron Length = 250

Iteration: 1
 Score = 42.4 bits (98), Expect = 3e-04,   Method: Compositional matrix adjust.
 Identities = 45/193 (23%), Positives = 85/193 (44%), Gaps = 10/193 (5%)
Query: 49  VVIITGASSGIGEHLAYEYXXXXXXXXXXXXXEKSLEEVAD----TAREIGSPDVITIRA 104
           + IITGAS GIG  +A                +++LE+V D    + + +  P V+ +  
Sbjct: 9   LAIITGASQGIGAVIAAGLATDGYRVVLIARSKQNLEKVHDEIXRSNKHVQEPIVLPL-- 66
Query: 105 DVSKVDDCRSLVEETMNHFGRLDHLVNNAGISSVALFEDIVNITDFKQIMNINFWGSVYT 164
           D++      + +++    +G +D LVN A         + V+  +F++I  IN       
Sbjct: 67  DITDCTKADTEIKDIHQKYGAVDILVNAAAXFXDGSLSEPVD--NFRKIXEINVIAQYGI 124
Query: 165 TRFAVPHLRYTK-GKIVVLSSAASWLTAPRMSFYNASKAALVLFFETLRVELGS-DVGVT 222
            +      +  K G I  ++S A+         Y ++K AL+   E+L  EL    + VT
Sbjct: 125 LKTVTEIXKVQKNGYIFNVASRAAKYGFADGGIYGSTKFALLGLAESLYRELAPLGIRVT 184
Query: 223 IVTPGFIESELTQ 235
            + PG++ ++  +
Sbjct: 185 TLCPGWVNTDXAK 197

>pdb|3U9L|A Chain A, The Crystal Structure Of 3-Oxoacyl-[acyl-Carrier-Protein] Reductase (Nadph) From Sinorhizobium Meliloti Length = 324

Iteration: 1
 Score = 42.0 bits (97), Expect = 3e-04,   Method: Compositional matrix adjust.
 Identities = 39/141 (27%), Positives = 64/141 (45%), Gaps = 7/141 (4%)
Query: 46  SGKVVIITGASSGIG----EHLA-YEYXXXXXXXXXXXXXEKSLEEVADTAREIGSPDVI 100
           S K+++ITGASSG G    E LA   +               ++E +A  AR+    D+ 
Sbjct: 4   SKKIILITGASSGFGRLTAEALAGAGHRVYASXRDIVGRNASNVEAIAGFARD-NDVDLR 62
Query: 101 TIRADVSKVDDCRSLVEETMNHFGRLDHLVNNAGISSVALFEDIVNITDFKQIMNINFWG 160
           T+  DV         +++ +   GR+D L++NAG       E       F ++ +IN   
Sbjct: 63  TLELDVQSQVSVDRAIDQIIGEDGRIDVLIHNAGHXVFGPAEAFTP-EQFAELYDINVLS 121
Query: 161 SVYTTRFAVPHLRYTKGKIVV 181
           +    R A+PH R  K  +++
Sbjct: 122 TQRVNRAALPHXRRQKHGLLI 142

>pdb|4FC6|A Chain A, Studies On Dcr Shed New Light On Peroxisomal Beta-Oxidation: Crystal Structure Of The Ternary Complex Of Pdcr Length = 277

Iteration: 1
 Score = 41.6 bits (96), Expect = 4e-04,   Method: Compositional matrix adjust.
 Identities = 53/218 (24%), Positives = 87/218 (39%), Gaps = 12/218 (5%)
Query: 35  SVFNSIFSEDV-SGKVVIITGASSGIGEHLAYEYXXXXXXXXXXXXXEKSLEEVADTARE 93
             +  +F  D+   KV  ITG  SGIG  +A  +              +SL  V   AR+
Sbjct: 14  PAYRHLFCPDLLRDKVAFITGGGSGIGFRIAEIFMRHGCHTVIA---SRSLPRVLTAARK 70
Query: 94  IGSPD---VITIRADVSKVDDCRSLVEETMNHFGRLDHLVNNAGISSVALFEDIVNITDF 150
           +        + +  DV       + V++ +  FGR+D L+N A   +       ++   F
Sbjct: 71  LAGATGRRCLPLSMDVRAPPAVMAAVDQALKEFGRIDILINCAA-GNFLCPAGALSFNAF 129
Query: 151 KQIMNINFWGSVYTTRFAVPHLRYTKGKIVVLSSAASWLTAPRMSFYNAS-KAALVLFFE 209
           K +M+I+  G+   +R          G ++V  +A        +  +  S KAA+     
Sbjct: 130 KTVMDIDTSGTFNVSRVLYEKFFRDHGGVIVNITATLGNRGQALQVHAGSAKAAVDAMTR 189
Query: 210 TLRVELGS-DVGVTIVTPGFIESELTQGKFLTGRRQNS 246
            L VE G  ++ V  + PG I    T+G    G  Q S
Sbjct: 190 HLAVEWGPQNIRVNSLAPGPISG--TEGLRRLGGPQAS 225

>pdb|2YW9|A Chain A, Crystal Structure Of Tt0143 From Thermus Thermophilus Hb8 Length = 261

Iteration: 1
 Score = 41.2 bits (95), Expect = 6e-04,   Method: Compositional matrix adjust.
 Identities = 49/198 (24%), Positives = 83/198 (41%), Gaps = 9/198 (4%)
Query: 40  IFSEDVSGKVVIITGASS--GIGEHLAYEYXXXXXXXXXXXXXEKSLEEVADTAREIGSP 97
           + + D+SGK  ++ G ++   +G  +A +              E+   E    A  +G  
Sbjct: 1   MLTVDLSGKKALVMGVTNQRSLGFAIAAKLKEAGAEVALSYQAERLRPEAEKLAEALGG- 59
Query: 98  DVITIRADVSKVDDCRSLVEETMNHFGRLDHLVNNAGISSVALFEDIVNIT---DFKQIM 154
             +  RADV++ ++  +L       FG LD+LV+    +     E     T   D+   +
Sbjct: 60  -ALLFRADVTQDEELDALFAGVKEAFGGLDYLVHAIAFAPREAMEGRYIDTRRQDWLLAL 118
Query: 155 NINFWGSVYTTRFAVPHLRYTKGKIVVLSSAASWLTAPRMSFYNASKAALVLFFETLRVE 214
            ++ +  V   R A P LR   G IV L+  AS    P+ +    +KAAL      L  E
Sbjct: 119 EVSAYSLVAVARRAEPLLR-EGGGIVTLTYYASEKVVPKYNVMAIAKAALEASVRYLAYE 177
Query: 215 LGSD-VGVTIVTPGFIES 231
           LG   V V  ++ G + +
Sbjct: 178 LGPKGVRVNAISAGPVRT 195

>pdb|4IBO|A Chain A, Crystal Structure Of A Putative Gluconate Dehydrogenase From Agrobacterium Tumefaciens (Target Efi-506446) Length = 271

Iteration: 1
 Score = 40.8 bits (94), Expect = 7e-04,   Method: Compositional matrix adjust.
 Identities = 43/202 (21%), Positives = 80/202 (39%), Gaps = 20/202 (9%)
Query: 44  DVSGKVVIITGASSGIGEHLAYEYXXXXXXXXXXXXXEKSLEEVADTAREIGSPDVITIR 103
           D+ G+  ++TG+S G+G  +A                   + +     R +G  D   + 
Sbjct: 23  DLGGRTALVTGSSRGLGRAMAEGLAVAGARILINGTDPSRVAQTVQEFRNVGH-DAEAVA 81
Query: 104 ADVSKVDDCRSLVEETMNHFGRLDH-------LVNNAGIS-SVALFEDIVNITDFKQIMN 155
            DV+          E +  F RLD        LVNNAGI     + E  +   D++++++
Sbjct: 82  FDVTS-------ESEIIEAFARLDEQGIDVDILVNNAGIQFRKPMIE--LETADWQRVID 132
Query: 156 INFWGSVYTTRFAVPHL-RYTKGKIVVLSSAASWLTAPRMSFYNASKAALVLFFETLRVE 214
            N   +    R A   +     GKIV + S  S L    ++ Y  +K  + +    +  E
Sbjct: 133 TNLTSAFMIGREAAKRMIPRGYGKIVNIGSLTSELARATVAPYTVAKGGIKMLTRAMAAE 192
Query: 215 LGS-DVGVTIVTPGFIESELTQ 235
                +    + PG++ +++ Q
Sbjct: 193 WAQYGIQANAIGPGYMLTDMNQ 214

>pdb|1CYD|A Chain A, Carbonyl Reductase Complexed With Nadph And 2-Propanol Length = 244

Iteration: 1
 Score = 40.4 bits (93), Expect = 9e-04,   Method: Compositional matrix adjust.
 Identities = 41/193 (21%), Positives = 78/193 (40%), Gaps = 13/193 (6%)
Query: 46  SGKVVIITGASSGIGEHLAYEYXXXXXXXXXXXXXEKSLEEVADTAREIGSPDVITIRAD 105
           SG   ++TGA  GIG                       L  +A        P +  +  D
Sbjct: 6   SGLRALVTGAGKGIGRDTVKALHASGAKVVAVTRTNSDLVSLAKEC-----PGIEPVCVD 60
Query: 106 VSKVDDCRSLVEETMNHFGRLDHLVNNAGISSVALFEDIVNITDFKQIMNINFWGSVYTT 165
           +   D      E+ +   G +D LVNNA +  +  F ++     F +  ++N       +
Sbjct: 61  LGDWD----ATEKALGGIGPVDLLVNNAALVIMQPFLEVTK-EAFDRSFSVNLRSVFQVS 115
Query: 166 RFAVPHL--RYTKGKIVVLSSAASWLTAPRMSFYNASKAALVLFFETLRVELGS-DVGVT 222
           +     +  R   G IV +SS  + +T P +  Y+++K A+ +  + + +ELG   + V 
Sbjct: 116 QMVARDMINRGVPGSIVNVSSMVAHVTFPNLITYSSTKGAMTMLTKAMAMELGPHKIRVN 175
Query: 223 IVTPGFIESELTQ 235
            V P  + +++ +
Sbjct: 176 SVNPTVVLTDMGK 188

Structure Templates Detected by RPS-BLAST

Original result of RPS-BLAST against PDB70 database

ID	Length	Definition	E-value
Query	248
1xu9_A	286	Corticosteroid 11-beta-dehydrogenase, isozyme 1; h	3e-97
3l6e_A	235	Oxidoreductase, short-chain dehydrogenase/reducta;	9e-68
3ioy_A	319	Short-chain dehydrogenase/reductase SDR; structura	3e-66
3tjr_A	301	Short chain dehydrogenase; structural genomics, se	1e-63
1yb1_A	272	17-beta-hydroxysteroid dehydrogenase type XI; shor	1e-63
1xkq_A	280	Short-chain reductase family member (5D234); parra	4e-63
1spx_A	278	Short-chain reductase family member (5L265); paral	3e-61
1xhl_A	297	Short-chain dehydrogenase/reductase family member	8e-61
3kzv_A	254	Uncharacterized oxidoreductase YIR035C; cytoplasmi	8e-60
3ucx_A	264	Short chain dehydrogenase; ssgcid, seattle structu	5e-59
3nyw_A	250	Putative oxidoreductase; fatty acid synthesis,3-ox	7e-59
3l77_A	235	Short-chain alcohol dehydrogenase; oxidoreductase;	2e-57
4fgs_A	273	Probable dehydrogenase protein; PSI-biology, nysgr	5e-56
3svt_A	281	Short-chain type dehydrogenase/reductase; ssgcid,	5e-56
3imf_A	257	Short chain dehydrogenase; structural genomics, in	6e-56
4dyv_A	272	Short-chain dehydrogenase/reductase SDR; structura	1e-55
3ai3_A	263	NADPH-sorbose reductase; rossmann-fold, NADPH-depe	2e-55
1w6u_A	302	2,4-dienoyl-COA reductase, mitochondrial precursor	2e-55
2bd0_A	244	Sepiapterin reductase; oxidoreductase; HET: NAP BI	5e-55
4fc7_A	277	Peroxisomal 2,4-dienoyl-COA reductase; SDR/rossman	7e-55
3zv4_A	281	CIS-2,3-dihydrobiphenyl-2,3-DIOL dehydrogenase; ox	1e-54
3lf2_A	265	Short chain oxidoreductase Q9HYA2; SDR, SCOR, ross	5e-54
4egf_A	266	L-xylulose reductase; structural genomics, ssgcid,	5e-54
3guy_A	230	Short-chain dehydrogenase/reductase SDR; structura	6e-54
4eso_A	255	Putative oxidoreductase; NADP, structural genomics	8e-54
3rkr_A	262	Short chain oxidoreductase; rossmann fold; HET: NA	1e-53
1fmc_A	255	7 alpha-hydroxysteroid dehydrogenase; short-chain	1e-53
2jah_A	247	Clavulanic acid dehydrogenase; short-chain dehydro	2e-53
2ehd_A	234	Oxidoreductase, oxidoreductase, short-chain dehydr	5e-53
4dry_A	281	3-oxoacyl-[acyl-carrier-protein] reductase; struct	1e-52
1zem_A	262	Xylitol dehydrogenase; rossmann fold, dinucleotide	2e-52
3v8b_A	283	Putative dehydrogenase, possibly 3-oxoacyl-[acyl-	2e-52
1yxm_A	303	Pecra, peroxisomal trans 2-enoyl COA reductase; pe	3e-52
3tfo_A	264	Putative 3-oxoacyl-(acyl-carrier-protein) reducta;	3e-52
2zat_A	260	Dehydrogenase/reductase SDR family member 4; alpha	5e-52
3e9n_A	245	Putative short-chain dehydrogenase/reductase; stru	5e-52
4dqx_A	277	Probable oxidoreductase protein; structural genomi	5e-52
2yut_A	207	Putative short-chain oxidoreductase; alpha and bet	5e-52
3n74_A	261	3-ketoacyl-(acyl-carrier-protein) reductase; seatt	7e-52
2cfc_A	250	2-(R)-hydroxypropyl-COM dehydrogenase; NAD, oxidor	7e-52
1ae1_A	273	Tropinone reductase-I; oxidoreductase, tropane alk	2e-51
1gee_A	261	Glucose 1-dehydrogenase; short-chain dehydrogenase	3e-51
1yde_A	270	Retinal dehydrogenase/reductase 3; oxidoreductase,	3e-51
4e6p_A	259	Probable sorbitol dehydrogenase (L-iditol 2-dehyd;	4e-51
4fn4_A	254	Short chain dehydrogenase; NADH-binding, rossmann	4e-51
3h7a_A	252	Short chain dehydrogenase; oxidoreductase, PSI-2,	5e-51
3f1l_A	252	Uncharacterized oxidoreductase YCIK; E. coli, NADP	9e-51
3tox_A	280	Short chain dehydrogenase; structural genomics, PS	9e-51
1xg5_A	279	ARPG836; short chain dehydrogenase, human, SGC, st	1e-50
3gvc_A	277	Oxidoreductase, probable short-chain type dehydrog	1e-50
3gaf_A	256	7-alpha-hydroxysteroid dehydrogenase; seattle stru	2e-50
2ae2_A	260	Protein (tropinone reductase-II); oxidoreductase,	2e-50
1sby_A	254	Alcohol dehydrogenase; ternary complex, NAD, trifl	3e-50
3r1i_A	276	Short-chain type dehydrogenase/reductase; structur	3e-50
1iy8_A	267	Levodione reductase; oxidoreductase; HET: NAD; 1.6	3e-50
3tzq_B	271	Short-chain type dehydrogenase/reductase; ssgcid,	5e-50
3o38_A	266	Short chain dehydrogenase; tuberculosis, ortholog	6e-50
3i1j_A	247	Oxidoreductase, short chain dehydrogenase/reducta;	1e-49
3awd_A	260	GOX2181, putative polyol dehydrogenase; oxidoreduc	1e-49
3p19_A	266	BFPVVD8, putative blue fluorescent protein; rossma	2e-49
3ctm_A	279	Carbonyl reductase; alcohol dehydrogenase, short-c	3e-49
2d1y_A	256	Hypothetical protein TT0321; strucrtural genomics,	3e-49
3ksu_A	262	3-oxoacyl-acyl carrier protein reductase; structur	3e-49
4e4y_A	244	Short chain dehydrogenase family protein; structur	4e-49
3oid_A	258	Enoyl-[acyl-carrier-protein] reductase [NADPH]; fa	5e-49
1geg_A	256	Acetoin reductase; SDR family, oxidoreductase; HET	5e-49
3qiv_A	253	Short-chain dehydrogenase or 3-oxoacyl-[acyl-CARR	5e-49
3m1a_A	281	Putative dehydrogenase; short, PSI, MCSG, structur	7e-49
1oaa_A	259	Sepiapterin reductase; tetrahydrobiopterin, oxidor	9e-49
3a28_C	258	L-2.3-butanediol dehydrogenase; chiral substrate r	9e-49
3ak4_A	263	NADH-dependent quinuclidinone reductase; SDR, (R)-	9e-49
3v2h_A	281	D-beta-hydroxybutyrate dehydrogenase; structural g	1e-48
3vtz_A	269	Glucose 1-dehydrogenase; rossmann fold, oxidoreduc	1e-48
1xq1_A	266	Putative tropinone reducatse; structural genomics,	2e-48
1hxh_A	253	3BETA/17BETA-hydroxysteroid dehydrogenase; alpha-b	2e-48
3edm_A	259	Short chain dehydrogenase; structural genomics, ox	3e-48
2ew8_A	249	(S)-1-phenylethanol dehydrogenase; transferase; 2.	3e-48
2b4q_A	276	Rhamnolipids biosynthesis 3-oxoacyl-[acyl- carrier	3e-48
3gem_A	260	Short chain dehydrogenase; structural genomics, AP	4e-48
2nwq_A	272	Probable short-chain dehydrogenase; oxidoreductase	6e-48
1hdc_A	254	3-alpha, 20 beta-hydroxysteroid dehydrogenase; oxi	7e-48
2dtx_A	264	Glucose 1-dehydrogenase related protein; rossmann	8e-48
1g0o_A	283	Trihydroxynaphthalene reductase; protein-NADPH-act	1e-47
3d3w_A	244	L-xylulose reductase; uronate cycle, short-chain d	2e-47
3afn_B	258	Carbonyl reductase; alpha/beta/alpha, rossmann-fol	2e-47
1cyd_A	244	Carbonyl reductase; short-chain dehydrogenase, oxi	2e-47
3rku_A	287	Oxidoreductase YMR226C; substrate fingerprint, sho	2e-47
4e3z_A	272	Putative oxidoreductase protein; PSI-biology, stru	2e-47
3uxy_A	266	Short-chain dehydrogenase/reductase SDR; structura	2e-47
1ja9_A	274	4HNR, 1,3,6,8-tetrahydroxynaphthalene reductase; p	2e-47
1zk4_A	251	R-specific alcohol dehydrogenase; short chain redu	2e-47
3kvo_A	346	Hydroxysteroid dehydrogenase-like protein 2; HSDL2	3e-47
3v2g_A	271	3-oxoacyl-[acyl-carrier-protein] reductase; struct	5e-47
3is3_A	270	17BETA-hydroxysteroid dehydrogenase; short chain d	7e-47
1nff_A	260	Putative oxidoreductase RV2002; directed evolution	1e-46
2gdz_A	267	NAD+-dependent 15-hydroxyprostaglandin dehydrogen;	1e-46
3tsc_A	277	Putative oxidoreductase; structural genomics, seat	2e-46
2a4k_A	263	3-oxoacyl-[acyl carrier protein] reductase; reduct	2e-46
3u5t_A	267	3-oxoacyl-[acyl-carrier-protein] reductase; struct	3e-46
3t4x_A	267	Oxidoreductase, short chain dehydrogenase/reducta;	3e-46
2z1n_A	260	Dehydrogenase; reductase, SDR, oxidoreductase; 1.8	4e-46
2q2v_A	255	Beta-D-hydroxybutyrate dehydrogenase; SDR, oxidore	4e-46
1h5q_A	265	NADP-dependent mannitol dehydrogenase; oxidoreduct	5e-46
1zmo_A	244	Halohydrin dehalogenase; haloalcohol dehalogenase,	6e-46
3dii_A	247	Short-chain dehydrogenase/reductase SDR; SCOR, ros	6e-46
3orf_A	251	Dihydropteridine reductase; alpha-beta-alpha sandw	7e-46
4g81_D	255	Putative hexonate dehydrogenase; enzyme function i	2e-45
1x1t_A	260	D(-)-3-hydroxybutyrate dehydrogenase; NAD, NADH, S	2e-45
3gdg_A	267	Probable NADP-dependent mannitol dehydrogenase; ro	3e-45
3pgx_A	280	Carveol dehydrogenase; structural genomics, seattl	3e-45
3t7c_A	299	Carveol dehydrogenase; structural genomics, seattl	5e-45
2qq5_A	260	DHRS1, dehydrogenase/reductase SDR family member 1	6e-45
3sx2_A	278	Putative 3-ketoacyl-(acyl-carrier-protein) reduct;	8e-45
3uve_A	286	Carveol dehydrogenase ((+)-trans-carveol dehydrog;	9e-45
3e03_A	274	Short chain dehydrogenase; structural genomics, PS	1e-44
3u9l_A	324	3-oxoacyl-[acyl-carrier-protein] reductase; struct	1e-44
3un1_A	260	Probable oxidoreductase; structural genomics, PSI-	2e-44
3pk0_A	262	Short-chain dehydrogenase/reductase SDR; ssgcid, s	3e-44
3icc_A	255	Putative 3-oxoacyl-(acyl carrier protein) reducta;	4e-44
2bgk_A	278	Rhizome secoisolariciresinol dehydrogenase; oxidor	4e-44
3sc4_A	285	Short chain dehydrogenase (A0QTM2 homolog); ssgcid	5e-44
3oec_A	317	Carveol dehydrogenase (mytha.01326.C, A0R518 HOMO;	6e-44
1vl8_A	267	Gluconate 5-dehydrogenase; TM0441, structural geno	7e-44
3asu_A	248	Short-chain dehydrogenase/reductase SDR; SDR famil	9e-44
2wsb_A	254	Galactitol dehydrogenase; oxidoreductase, SDR, ros	1e-43
3sju_A	279	Keto reductase; short-chain dehydrogenase, oxidore	2e-43
3r3s_A	294	Oxidoreductase; structural genomics, csgid, center	2e-43
3rih_A	293	Short chain dehydrogenase or reductase; structural	3e-43
2ag5_A	246	DHRS6, dehydrogenase/reductase (SDR family) member	4e-43
3pxx_A	287	Carveol dehydrogenase; structural genomics, seattl	1e-42
2fwm_X	250	2,3-dihydro-2,3-dihydroxybenzoate dehydrogenase; e	3e-42
1mxh_A	276	Pteridine reductase 2; SDR topology, protein-subst	7e-42
3rwb_A	247	TPLDH, pyridoxal 4-dehydrogenase; short chain dehy	9e-42
3cxt_A	291	Dehydrogenase with different specificities; rossma	9e-42
4da9_A	280	Short-chain dehydrogenase/reductase; structural ge	1e-41
3s55_A	281	Putative short-chain dehydrogenase/reductase; stru	1e-41
1ooe_A	236	Dihydropteridine reductase; structural genomics, P	6e-41
2x9g_A	288	PTR1, pteridine reductase; short chain dehydrogena	1e-40
1zmt_A	254	Haloalcohol dehalogenase HHEC; halohydrin dehaloge	1e-40
2rhc_B	277	Actinorhodin polyketide ketoreductase; oxidoreduct	1e-40
1jtv_A	327	17 beta-hydroxysteroid dehydrogenase type 1; stero	2e-40
3ijr_A	291	Oxidoreductase, short chain dehydrogenase/reducta;	3e-40
3d7l_A	202	LIN1944 protein; APC89317, structural genomics, PS	5e-40
3uf0_A	273	Short-chain dehydrogenase/reductase SDR; gluconate	1e-39
1dhr_A	241	Dihydropteridine reductase; oxidoreductase(acting	2e-38
3ftp_A	270	3-oxoacyl-[acyl-carrier protein] reductase; ssgcid	4e-38
3lyl_A	247	3-oxoacyl-(acyl-carrier-protein) reductase; alpha	5e-38
2ekp_A	239	2-deoxy-D-gluconate 3-dehydrogenase; structural ge	6e-38
1uls_A	245	Putative 3-oxoacyl-acyl carrier protein reductase;	7e-38
2qhx_A	328	Pteridine reductase 1; oxidoreductase, short-chain	7e-38
1e7w_A	291	Pteridine reductase; dihydrofolate reductase, shor	1e-37
2c07_A	285	3-oxoacyl-(acyl-carrier protein) reductase; oxidor	2e-37
3op4_A	248	3-oxoacyl-[acyl-carrier protein] reductase; 3-keto	1e-36
4dmm_A	269	3-oxoacyl-[acyl-carrier-protein] reductase; rossma	1e-36
3grp_A	266	3-oxoacyl-(acyl carrierprotein) reductase; structu	2e-36
2hq1_A	247	Glucose/ribitol dehydrogenase; CTH-1438, structura	3e-36
3i4f_A	264	3-oxoacyl-[acyl-carrier protein] reductase; struct	4e-36
2pnf_A	248	3-oxoacyl-[acyl-carrier-protein] reductase; short	5e-36
1o5i_A	249	3-oxoacyl-(acyl carrier protein) reductase; TM1169	5e-36
2uvd_A	246	3-oxoacyl-(acyl-carrier-protein) reductase; beta-k	8e-36
3osu_A	246	3-oxoacyl-[acyl-carrier-protein] reductase; struct	1e-35
2pd6_A	264	Estradiol 17-beta-dehydrogenase 8; short-chain deh	2e-35
2ph3_A	245	3-oxoacyl-[acyl carrier protein] reductase; TTHA04	3e-35
1edo_A	244	Beta-keto acyl carrier protein reductase; nucleoti	4e-35
3tpc_A	257	Short chain alcohol dehydrogenase-related dehydro;	3e-34
3ppi_A	281	3-hydroxyacyl-COA dehydrogenase type-2; ssgcid, de	6e-34
2dkn_A	255	3-alpha-hydroxysteroid dehydrogenase; oxidoreducta	8e-34
3f9i_A	249	3-oxoacyl-[acyl-carrier-protein] reductase; 3-keto	1e-33
2o23_A	265	HADH2 protein; HSD17B10, schad, ERAB, type II HADH	3e-33
3gk3_A	269	Acetoacetyl-COA reductase; acetoacetyl-CO reductas	4e-33
2nm0_A	253	Probable 3-oxacyl-(acyl-carrier-protein) reductas;	8e-33
3ezl_A	256	Acetoacetyl-COA reductase; ssgcid, acetyacetyl-COA	1e-32
1uzm_A	247	3-oxoacyl-[acyl-carrier protein] reductase; beta-k	3e-32
1gz6_A	319	Estradiol 17 beta-dehydrogenase 4; 17BETA-HSD4, MF	1e-31
3qlj_A	322	Short chain dehydrogenase; structural genomics, se	1e-31
1fjh_A	257	3alpha-hydroxysteroid dehydrogenase/carbonyl reduc	2e-31
2et6_A	604	(3R)-hydroxyacyl-COA dehydrogenase; MFE-2, beta-ox	4e-30
2et6_A	604	(3R)-hydroxyacyl-COA dehydrogenase; MFE-2, beta-ox	1e-23
3tl3_A	257	Short-chain type dehydrogenase/reductase; ssgcid,	4e-29
3o26_A	311	Salutaridine reductase; short chain dehydrogenase/	2e-28
3u0b_A	454	Oxidoreductase, short chain dehydrogenase/reducta	2e-28
1wma_A	276	Carbonyl reductase [NADPH] 1; oxidoreductase; HET:	2e-27
3oml_A	613	GH14720P, peroxisomal multifunctional enzyme type	1e-26
1yo6_A	250	Putative carbonyl reductase sniffer; tyrosine-depe	2e-26
1uay_A	242	Type II 3-hydroxyacyl-COA dehydrogenase; beta oxid	3e-25
1sny_A	267	Sniffer CG10964-PA; alpha and beta protein, rossma	4e-25
3rd5_A	291	Mypaa.01249.C; ssgcid, structural genomics, seattl	1e-20
1lu9_A	287	Methylene tetrahydromethanopterin dehydrogenase; a	4e-14
4alk_A	282	ENR, enoyl-[acyl-carrier-protein] reductase [NADPH	2e-09
3oig_A	266	Enoyl-[acyl-carrier-protein] reductase [NADH]; fat	4e-09
2p91_A	285	Enoyl-[acyl-carrier-protein] reductase [NADH]; NAD	7e-09
2wyu_A	261	Enoyl-[acyl carrier protein] reductase; oxidoreduc	7e-08
2vz8_A	2512	Fatty acid synthase; transferase, phosphopantethei	8e-08
3grk_A	293	Enoyl-(acyl-carrier-protein) reductase (NADH); ssg	1e-07
3k31_A	296	Enoyl-(acyl-carrier-protein) reductase; ssgcid, NI	1e-07
2pd4_A	275	Enoyl-[acyl-carrier-protein] reductase [NADH]; ant	1e-07
3ek2_A	271	Enoyl-(acyl-carrier-protein) reductase (NADH); ssg	2e-07
3nrc_A	280	Enoyl-[acyl-carrier-protein] reductase (NADH); ros	3e-07
1qsg_A	265	Enoyl-[acyl-carrier-protein] reductase; enoyl redu	8e-07
3slk_A	795	Polyketide synthase extender module 2; rossmann fo	5e-05
3ajr_A	317	NDP-sugar epimerase; L-threonine dehydrogenase, L-	3e-04
2fr1_A	486	Erythromycin synthase, eryai; short chain dehydrog	3e-04
3mje_A	496	AMPHB; rossmann fold, oxidoreductase; HET: NDP; 1.	4e-04

>1xu9_A Corticosteroid 11-beta-dehydrogenase, isozyme 1; hydroxysteroid, SDR, oxidoreductase; HET: NDP CPS MES; 1.55A {Homo sapiens} SCOP: c.2.1.2 PDB: 1xu7_A* 3bzu_A* 3czr_A* 3d3e_A* 3d4n_A* 3fco_A* 3frj_A* 3h6k_A* 3hfg_A* 3oq1_A* 3qqp_A* 3pdj_A* 3d5q_A* 2rbe_A* 3byz_A* 3ey4_A* 3tfq_A* 3ch6_A* 2irw_A* 2ilt_A* ... Length = 286

 Score =  284 bits (730), Expect = 3e-97
 Identities = 62/196 (31%), Positives = 100/196 (51%), Gaps = 4/196 (2%)

Query: 43  EDVSGKVVIITGASSGIGEHLAYEYARRGACLALCARREKSLEEVADTAREIGSPDVITI 102
           E + GK VI+TGAS GIG  +AY  A+ GA + + AR +++L++V     E+G+     I
Sbjct: 24  EMLQGKKVIVTGASKGIGREMAYHLAKMGAHVVVTARSKETLQKVVSHCLELGAASAHYI 83

Query: 103 RADVSKVDDCRSLVEETMNHFGRLDHLVNNAGISSVALFEDIVNITDFKQIMNINFWGSV 162
              +  +      V +     G LD L+ N   ++        +I   ++ M +NF   V
Sbjct: 84  AGTMEDMTFAEQFVAQAGKLMGGLDMLILNHITNTSLNLFHD-DIHHVRKSMEVNFLSYV 142

Query: 163 YTTRFAVPHLRYTKGKIVVLSSAASWLTAPRMSFYNASKAALVLFFETLRVEL---GSDV 219
             T  A+P L+ + G IVV+SS A  +  P ++ Y+ASK AL  FF ++R E      +V
Sbjct: 143 VLTVAALPMLKQSNGSIVVVSSLAGKVAYPMVAAYSASKFALDGFFSSIRKEYSVSRVNV 202

Query: 220 GVTIVTPGFIESELTQ 235
            +T+   G I++E   
Sbjct: 203 SITLCVLGLIDTETAM 218

>3l6e_A Oxidoreductase, short-chain dehydrogenase/reducta; structural genomics, PSI-2, protein structure initiative; 2.30A {Aeromonas hydrophila subsp} Length = 235

 Score =  208 bits (531), Expect = 9e-68
 Identities = 45/192 (23%), Positives = 81/192 (42%), Gaps = 6/192 (3%)

Query: 46  SGKVVIITGASSGIGEHLAYEYARRGACLALCARREKSLEEVADTAREIGSPDVITIRAD 105
           S   +I+TGA SG+G  L      RG  +++  RR + L++       +G+  VI I AD
Sbjct: 2   SLGHIIVTGAGSGLGRALTIGLVERGHQVSMMGRRYQRLQQQE---LLLGN-AVIGIVAD 57

Query: 106 VSKVDDCRSLVEETMNHFGRLDHLVNNAGISSVALFEDIVNITDFKQIMNINFWGSVYTT 165
           ++  +D        +   G  + +++ AG                +++M  N   ++   
Sbjct: 58  LAHHEDVDVAFAAAVEWGGLPELVLHCAGTGEFGPVGVY-TAEQIRRVMESNLVSTILVA 116

Query: 166 RFAVPHLRYTKGKIVVLSSAASWLTAPRMSFYNASKAALVLFFETLRVELGSD-VGVTIV 224
           +  V  +    G +  + S+A+ +     S Y ASK  +  F E+LR EL    + +  +
Sbjct: 117 QQTVRLIGERGGVLANVLSSAAQVGKANESLYCASKWGMRGFLESLRAELKDSPLRLVNL 176

Query: 225 TPGFIESELTQG 236
            P  I SE    
Sbjct: 177 YPSGIRSEFWDN 188

>3ioy_A Short-chain dehydrogenase/reductase SDR; structural genomics, oxidoreductase, PSI-2, protein structure initiative; 1.90A {Novosphingobium aromaticivorans DSM12444} Length = 319

 Score =  207 bits (528), Expect = 3e-66
 Identities = 51/202 (25%), Positives = 99/202 (49%), Gaps = 10/202 (4%)

Query: 43  EDVSGKVVIITGASSGIGEHLAYEYARRGACLALCARREKSLEEVADTAREIGS-PDVIT 101
           +D +G+   +TG ++G+G  L  +   +G  +A+   R+ S+++   T    GS P+V+ 
Sbjct: 4   KDFAGRTAFVTGGANGVGIGLVRQLLNQGCKVAIADIRQDSIDKALATLEAEGSGPEVMG 63

Query: 102 IRADVSKVDDCRSLVEETMNHFGRLDHLVNNAGISSVALFEDIVNITDFKQIMNINFWGS 161
           ++ DV+  +  +   +E    FG +  L NNAG++     E+  +  D+  ++ +N  G 
Sbjct: 64  VQLDVASREGFKMAADEVEARFGPVSILCNNAGVNLFQPIEES-SYDDWDWLLGVNLHGV 122

Query: 162 VYTTRFAVPHLR-------YTKGKIVVLSSAASWLTAPRMSFYNASKAALVLFFETLRVE 214
           V      VP +           G +V  +S A++L A     YN +K A+    E+L   
Sbjct: 123 VNGVTTFVPRMVERVKAGEQKGGHVVNTASMAAFLAAGSPGIYNTTKFAVRGLSESLHYS 182

Query: 215 L-GSDVGVTIVTPGFIESELTQ 235
           L   ++GV+++ PG ++S +  
Sbjct: 183 LLKYEIGVSVLCPGLVKSYIYA 204

>3tjr_A Short chain dehydrogenase; structural genomics, seattle structural genomics center for infectious disease, ssgcid, SCD, NAD; HET: UNL; 1.60A {Mycobacterium avium subsp} Length = 301

 Score =  199 bits (509), Expect = 1e-63
 Identities = 57/197 (28%), Positives = 98/197 (49%), Gaps = 5/197 (2%)

Query: 43  EDVSGKVVIITGASSGIGEHLAYEYARRGACLALCARREKSLEEVADTAREIGSPDVITI 102
               G+  ++TG +SGIG   A E+ARRGA L L    + +LE+  +  R  G  D   +
Sbjct: 27  SGFDGRAAVVTGGASGIGLATATEFARRGARLVLSDVDQPALEQAVNGLRGQG-FDAHGV 85

Query: 103 RADVSKVDDCRSLVEETMNHFGRLDHLVNNAGISSVALFEDIVNITDFKQIMNINFWGSV 162
             DV  +D+   L +E     G +D + +NAGI        + N  D++ +++I+ WGS+
Sbjct: 86  VCDVRHLDEMVRLADEAFRLLGGVDVVFSNAGIVVAGPLAQM-NHDDWRWVIDIDLWGSI 144

Query: 163 YTTRFAVPHL--RYTKGKIVVLSSAASWLTAPRMSFYNASKAALVLFFETLRVELGSD-V 219
           +     +P L  + T G I   +S A  +    +  Y  +K  +V   ETL  E+  + +
Sbjct: 145 HAVEAFLPRLLEQGTGGHIAFTASFAGLVPNAGLGTYGVAKYGVVGLAETLAREVKPNGI 204

Query: 220 GVTIVTPGFIESELTQG 236
           GV+++ P  +E++L   
Sbjct: 205 GVSVLCPMVVETKLVSN 221

>1yb1_A 17-beta-hydroxysteroid dehydrogenase type XI; short chain dehydrogenase, HUM structural genomics, structural genomics consortium, SGC; HET: AE2; 1.95A {Homo sapiens} SCOP: c.2.1.2 Length = 272

 Score =  198 bits (506), Expect = 1e-63
 Identities = 59/198 (29%), Positives = 94/198 (47%), Gaps = 7/198 (3%)

Query: 44  DVSGKVVIITGASSGIGEHLAYEYARRGACLALCARREKSLEEVADTAREIGSPDVITIR 103
            V+G++V+ITGA  GIG   AYE+A+  + L L    +  LEE A   + +G   V T  
Sbjct: 28  SVTGEIVLITGAGHGIGRLTAYEFAKLKSKLVLWDINKHGLEETAAKCKGLG-AKVHTFV 86

Query: 104 ADVSKVDDCRSLVEETMNHFGRLDHLVNNAGISSVALFEDIVNITDFKQIMNINFWGSVY 163
            D S  +D  S  ++     G +  LVNNAG+   +           ++   +N     +
Sbjct: 87  VDCSNREDIYSSAKKVKAEIGDVSILVNNAGVVYTSDLFAT-QDPQIEKTFEVNVLAHFW 145

Query: 164 TTRFAVPHLRYTK-GKIVVLSSAASWLTAPRMSFYNASKAALVLFFETLRVEL----GSD 218
           TT+  +P +     G IV ++SAA  ++ P +  Y +SK A V F +TL  EL     + 
Sbjct: 146 TTKAFLPAMTKNNHGHIVTVASAAGHVSVPFLLAYCSSKFAAVGFHKTLTDELAALQITG 205

Query: 219 VGVTIVTPGFIESELTQG 236
           V  T + P F+ +   + 
Sbjct: 206 VKTTCLCPNFVNTGFIKN 223

>1xkq_A Short-chain reductase family member (5D234); parrallel beta-sheet of seven strands in the order 3214567; HET: NDP; 2.10A {Caenorhabditis elegans} SCOP: c.2.1.2 Length = 280

 Score =  197 bits (504), Expect = 4e-63
 Identities = 62/198 (31%), Positives = 100/198 (50%), Gaps = 9/198 (4%)

Query: 46  SGKVVIITGASSGIGEHLAYEYARRGACLALCARREKSLEEVADTAREIGSP--DVITIR 103
           S K VIITG+S+GIG   A  +A+ GA + +  R  + LEE      + G     V ++ 
Sbjct: 5   SNKTVIITGSSNGIGRTTAILFAQEGANVTITGRSSERLEETRQIILKSGVSEKQVNSVV 64

Query: 104 ADVSKVDDCRSLVEETMNHFGRLDHLVNNAGISSVALFEDI---VNITDFKQIMNINFWG 160
           ADV+  D    ++  T+  FG++D LVNNAG +    F        I  + + + +N   
Sbjct: 65  ADVTTEDGQDQIINSTLKQFGKIDVLVNNAGAAIPDAFGTTGTDQGIDIYHKTLKLNLQA 124

Query: 161 SVYTTRFAVPHLRYTKGKIVVLSSAASWLTA-PRMSFYNASKAALVLFFETLRVELGSDV 219
            +  T+   PHL  +KG+IV +SS  +   A P   +Y  +KAAL  +  +  ++L    
Sbjct: 125 VIEMTKKVKPHLVASKGEIVNVSSIVAGPQAQPDFLYYAIAKAALDQYTRSTAIDLAKF- 183

Query: 220 GVTI--VTPGFIESELTQ 235
           G+ +  V+PG +E+  T 
Sbjct: 184 GIRVNSVSPGMVETGFTN 201

>1spx_A Short-chain reductase family member (5L265); parallel beta-sheet of seven strands in the order 3214567; 2.10A {Caenorhabditis elegans} SCOP: c.2.1.2 Length = 278

 Score =  192 bits (491), Expect = 3e-61
 Identities = 64/203 (31%), Positives = 102/203 (50%), Gaps = 9/203 (4%)

Query: 46  SGKVVIITGASSGIGEHLAYEYARRGACLALCARREKSLEEVADTAREIGSP--DVITIR 103
           + KV IITG+S+GIG   A  +AR GA + +  R  + LEE        G    +V ++ 
Sbjct: 5   AEKVAIITGSSNGIGRATAVLFAREGAKVTITGRHAERLEETRQQILAAGVSEQNVNSVV 64

Query: 104 ADVSKVDDCRSLVEETMNHFGRLDHLVNNAGISSVALFEDIV---NITDFKQIMNINFWG 160
           ADV+       ++  T+  FG+LD LVNNAG +            +I  +   +N+N   
Sbjct: 65  ADVTTDAGQDEILSTTLGKFGKLDILVNNAGAAIPDSQSKTGTAQSIESYDATLNLNLRS 124

Query: 161 SVYTTRFAVPHLRYTKGKIVVLSSAASWLTA-PRMSFYNASKAALVLFFETLRVELGSDV 219
            +  T+ AVPHL  TKG+IV +SS AS L A P   +Y+ +KAA+  +     ++L    
Sbjct: 125 VIALTKKAVPHLSSTKGEIVNISSIASGLHATPDFPYYSIAKAAIDQYTRNTAIDLIQH- 183

Query: 220 GVTI--VTPGFIESELTQGKFLT 240
           G+ +  ++PG + +       + 
Sbjct: 184 GIRVNSISPGLVATGFGSAMGMP 206

>1xhl_A Short-chain dehydrogenase/reductase family member putative tropinone reductase-II...; parallel beta-sheet of seven strands in the order 3214567; HET: NDP TNE; 2.40A {Caenorhabditis elegans} SCOP: c.2.1.2 Length = 297

 Score =  192 bits (490), Expect = 8e-61
 Identities = 60/196 (30%), Positives = 97/196 (49%), Gaps = 7/196 (3%)

Query: 46  SGKVVIITGASSGIGEHLAYEYARRGACLALCARREKSLEEVADTAREIGSP--DVITIR 103
           SGK VIITG+S+GIG   A  +A+ GA + +  R E  LEE      + G P   +  + 
Sbjct: 25  SGKSVIITGSSNGIGRSAAVIFAKEGAQVTITGRNEDRLEETKQQILKAGVPAEKINAVV 84

Query: 104 ADVSKVDDCRSLVEETMNHFGRLDHLVNNAGISSVALFEDI-VNITDFKQIMNINFWGSV 162
           ADV++      ++  T+  FG++D LVNNAG +      +    +  +++   +NF   +
Sbjct: 85  ADVTEASGQDDIINTTLAKFGKIDILVNNAGANLADGTANTDQPVELYQKTFKLNFQAVI 144

Query: 163 YTTRFAVPHLRYTKGKIVVLSSAASWLTA-PRMSFYNASKAALVLFFETLRVELGSDVGV 221
             T+    HL  TKG+IV +SS  +   A     +Y  +KAAL  +     ++L    GV
Sbjct: 145 EMTQKTKEHLIKTKGEIVNVSSIVAGPQAHSGYPYYACAKAALDQYTRCTAIDLIQH-GV 203

Query: 222 TI--VTPGFIESELTQ 235
            +  V+PG + +    
Sbjct: 204 RVNSVSPGAVATGFMG 219

>3kzv_A Uncharacterized oxidoreductase YIR035C; cytoplasmic protein, unknown function, structural genomics, MCSG, protein structure initiative; 2.00A {Saccharomyces cerevisiae} Length = 254

 Score =  188 bits (480), Expect = 8e-60
 Identities = 54/192 (28%), Positives = 93/192 (48%), Gaps = 9/192 (4%)

Query: 47  GKVVIITGASSGIGEHLAYEYARRGACLAL--CARREKSLEEVADTAREIGSPDVITIRA 104
           GKV+++TG S GIG+ +            +   AR E  L+++ +   + G      +  
Sbjct: 2   GKVILVTGVSRGIGKSIVDVLFSLDKDTVVYGVARSEAPLKKLKE---KYGD-RFFYVVG 57

Query: 105 DVSKVDDCRSLVEETMNHFGRLDHLVNNAGISS-VALFEDIVNITDFKQIMNINFWGSVY 163
           D+++    + LV   +   G++D LV NAG+   V    +I ++  +K++ +INF+  V 
Sbjct: 58  DITEDSVLKQLVNAAVKGHGKIDSLVANAGVLEPVQNVNEI-DVNAWKKLYDINFFSIVS 116

Query: 164 TTRFAVPHLRYTKGKIVVLSSAASWLTAPRMSFYNASKAALVLFFETLRVELGSDVGVTI 223
               A+P L+ T G +V +SS A  +       Y +SKAAL  F  TL  E    V    
Sbjct: 117 LVGIALPELKKTNGNVVFVSSDACNMYFSSWGAYGSSKAALNHFAMTLANE-ERQVKAIA 175

Query: 224 VTPGFIESELTQ 235
           V PG +++++  
Sbjct: 176 VAPGIVDTDMQV 187

>3ucx_A Short chain dehydrogenase; ssgcid, seattle structural genomics center for infectious DI dehydrogenase, oxidoreductase; HET: 1PE; 1.85A {Mycobacterium smegmatis} Length = 264

 Score =  186 bits (475), Expect = 5e-59
 Identities = 55/194 (28%), Positives = 97/194 (50%), Gaps = 6/194 (3%)

Query: 46  SGKVVIITGASSGIGEHLAYEYARRGACLALCARREKSLEEVADTAREIGSPDVITIRAD 105
           + KVV+I+G    +G  LA   A +GA L L AR  + LE+VA    + G    +++  D
Sbjct: 10  TDKVVVISGVGPALGTTLARRCAEQGADLVLAARTVERLEDVAKQVTDTGR-RALSVGTD 68

Query: 106 VSKVDDCRSLVEETMNHFGRLDHLVNNAG-ISSVALFEDIVNITDFKQIMNINFWGSVYT 164
           ++       LV+ETM  +GR+D ++NNA  + S+  F +       +  + +  +G++  
Sbjct: 69  ITDDAQVAHLVDETMKAYGRVDVVINNAFRVPSMKPFANT-TFEHMRDAIELTVFGALRL 127

Query: 165 TRFAVPHLRYTKGKIVVLSSAASWLTAPRMSFYNASKAALVLFFETLRVELGSDVGVTI- 223
            +   P L  +KG +V ++S     +  +   Y  +K+AL+   +TL  ELG   G+ + 
Sbjct: 128 IQGFTPALEESKGAVVNVNSMVVRHSQAKYGAYKMAKSALLAMSQTLATELGEK-GIRVN 186

Query: 224 -VTPGFIESELTQG 236
            V PG+I     + 
Sbjct: 187 SVLPGYIWGGTLKS 200

>3nyw_A Putative oxidoreductase; fatty acid synthesis,3-oxoacyl-[ACP] reductase, NADP+ bindin rossman fold, PSI-II, nysgxrc; 2.16A {Bacteroides thetaiotaomicron} Length = 250

 Score =  185 bits (473), Expect = 7e-59
 Identities = 50/198 (25%), Positives = 92/198 (46%), Gaps = 6/198 (3%)

Query: 42  SEDVSGKVVIITGASSGIGEHLAYEYARRGACLALCARREKSLEEVADTAREIG--SPDV 99
           S +    + IITGAS GIG  +A   A  G  + L AR +++LE+V D          + 
Sbjct: 2   SLEKQKGLAIITGASQGIGAVIAAGLATDGYRVVLIARSKQNLEKVHDEIMRSNKHVQEP 61

Query: 100 ITIRADVSKVDDCRSLVEETMNHFGRLDHLVNNAGISSVALFEDIVNITDFKQIMNINFW 159
           I +  D++      + +++    +G +D LVN A +       +   + +F++IM IN  
Sbjct: 62  IVLPLDITDCTKADTEIKDIHQKYGAVDILVNAAAMFMDGSLSE--PVDNFRKIMEINVI 119

Query: 160 GSVYTTRFAVPHLRYTK-GKIVVLSSAASWLTAPRMSFYNASKAALVLFFETLRVELGSD 218
                 +     ++  K G I  ++S A+         Y ++K AL+   E+L  EL   
Sbjct: 120 AQYGILKTVTEIMKVQKNGYIFNVASRAAKYGFADGGIYGSTKFALLGLAESLYRELAPL 179

Query: 219 -VGVTIVTPGFIESELTQ 235
            + VT + PG++ +++ +
Sbjct: 180 GIRVTTLCPGWVNTDMAK 197

>3l77_A Short-chain alcohol dehydrogenase; oxidoreductase; HET: NJP PG4; 1.60A {Thermococcus sibiricus} Length = 235

 Score =  181 bits (462), Expect = 2e-57
 Identities = 55/193 (28%), Positives = 90/193 (46%), Gaps = 4/193 (2%)

Query: 47  GKVVIITGASSGIGEHLAYEYARRGACLALCARREKSLEEVADTAREIGSPDVITIRADV 106
            KV +ITGAS GIGE +A   AR G  LAL AR    LE++A    +    +V     DV
Sbjct: 2   MKVAVITGASRGIGEAIARALARDGYALALGARSVDRLEKIAHELMQEQGVEVFYHHLDV 61

Query: 107 SKVDDCRSLVEETMNHFGRLDHLVNNAGISSVALFEDIVNITDFKQIMNINFWGSVYTTR 166
           SK +      ++ +  FG +D +V NAG+      E++ +  +F +++ +N  G   T +
Sbjct: 62  SKAESVEEFSKKVLERFGDVDVVVANAGLGYFKRLEEL-SEEEFHEMIEVNLLGVWRTLK 120

Query: 167 FAVPHLRYTK-GKIVVLSSAASWLTAPRMSFYNASKAALVLFFETLRVELGSDVGVTIVT 225
             +  L+ T    +V  S  ++    P    Y ++K A      T ++E   DV    + 
Sbjct: 121 AFLDSLKRTGGLALVTTSDVSAR-LIPYGGGYVSTKWAARALVRTFQIE-NPDVRFFELR 178

Query: 226 PGFIESELTQGKF 238
           PG +++     K 
Sbjct: 179 PGAVDTYFGGSKP 191

>4fgs_A Probable dehydrogenase protein; PSI-biology, nysgrc, structural genomics, NEW YORK structura genomics research consortium, three layer; 1.76A {Rhizobium etli} Length = 273

 Score =  179 bits (457), Expect = 5e-56
 Identities = 56/193 (29%), Positives = 89/193 (46%), Gaps = 9/193 (4%)

Query: 46  SGKVVIITGASSGIGEHLAYEYARRGACLALCARREKSLEEVADTAREIGSPDVITIRAD 105
           + K+ +ITGA+SGIG   A  +   GA + +  RR+  L+       EIG    + I+AD
Sbjct: 28  NAKIAVITGATSGIGLAAAKRFVAEGARVFITGRRKDVLDAAI---AEIG-GGAVGIQAD 83

Query: 106 VSKVDDCRSLVEETMNHFGRLDHLVNNAGISSVALFEDIVNITDFKQIMNINFWGSVYTT 165
            + + +   L E+     GR+D L  NAG  S+    ++     +    + N  G ++T 
Sbjct: 84  SANLAELDRLYEKVKAEAGRIDVLFVNAGGGSMLPLGEV-TEEQYDDTFDRNVKGVLFTV 142

Query: 166 RFAVPHLRYTKGKIVVLSSAASWLTAPRMSFYNASKAALVLFFETLRVELGSDVGVTI-- 223
           + A+P L      +V+  S A     P  S Y ASKAAL  F     ++L    G+ I  
Sbjct: 143 QKALPLLA-RGSSVVLTGSTAGSTGTPAFSVYAASKAALRSFARNWILDLKDR-GIRINT 200

Query: 224 VTPGFIESELTQG 236
           ++PG  E+     
Sbjct: 201 LSPGPTETTGLVE 213

>3svt_A Short-chain type dehydrogenase/reductase; ssgcid, seattle structural genomics center for infectious DI oxidoreductase; 2.00A {Mycobacterium ulcerans} Length = 281

 Score =  179 bits (457), Expect = 5e-56
 Identities = 43/199 (21%), Positives = 84/199 (42%), Gaps = 8/199 (4%)

Query: 44  DVSGKVVIITGASSGIGEHLAYEYARRGACLALCARREKSLEEVADTAREIGSP--DVIT 101
               +  ++TG  SGIG+ +A      GA + +  R    L         +G+    +  
Sbjct: 8   SFQDRTYLVTGGGSGIGKGVAAGLVAAGASVMIVGRNPDKLAGAVQELEALGANGGAIRY 67

Query: 102 IRADVSKVDDCRSLVEETMNHFGRLDHLVNNAGIS-SVALFEDIVNITDFKQIMNINFWG 160
              D++  D+    V+      GRL  +V+ AG S ++     + +   +++ +++N  G
Sbjct: 68  EPTDITNEDETARAVDAVTAWHGRLHGVVHCAGGSENIGPITQV-DSEAWRRTVDLNVNG 126

Query: 161 SVYTTRFAVPHLRYTK-GKIVVLSSAASWLTAPRMSFYNASKAALVLFFETLRVELGSDV 219
           ++Y  + A   +     G  V +SS A+  T      Y  +K+A+    +    ELG+  
Sbjct: 127 TMYVLKHAAREMVRGGGGSFVGISSIAASNTHRWFGAYGVTKSAVDHLMQLAADELGAS- 185

Query: 220 GVTI--VTPGFIESELTQG 236
            V +  + PG I ++L   
Sbjct: 186 WVRVNSIRPGLIRTDLVAA 204

>3imf_A Short chain dehydrogenase; structural genomics, infectious D center for structural genomics of infectious diseases, oxidoreductase, csgid; HET: MSE; 1.99A {Bacillus anthracis str} Length = 257

 Score =  178 bits (454), Expect = 6e-56
 Identities = 57/193 (29%), Positives = 102/193 (52%), Gaps = 6/193 (3%)

Query: 46  SGKVVIITGASSGIGEHLAYEYARRGACLALCARREKSLEEVADTAREIGSPDVITIRAD 105
             KVVIITG SSG+G+ +A  +A+ GA + +  R ++ LEE      +     ++T++ D
Sbjct: 5   KEKVVIITGGSSGMGKGMATRFAKEGARVVITGRTKEKLEEAKLEIEQFPG-QILTVQMD 63

Query: 106 VSKVDDCRSLVEETMNHFGRLDHLVNNAGISSVALFEDIVNITDFKQIMNINFWGSVYTT 165
           V   DD + ++E+    FGR+D L+NNA  + +   ED+ ++  +  ++NI   G+ Y +
Sbjct: 64  VRNTDDIQKMIEQIDEKFGRIDILINNAAGNFICPAEDL-SVNGWNSVINIVLNGTFYCS 122

Query: 166 RFAVPHL--RYTKGKIVVLSSAASWLTAPRMSFYNASKAALVLFFETLRVELGSDVGVTI 223
           +    +   +  KG I+ + +  +W   P +    A+KA ++   +TL VE G   G+ +
Sbjct: 123 QAIGKYWIEKGIKGNIINMVATYAWDAGPGVIHSAAAKAGVLAMTKTLAVEWGRKYGIRV 182

Query: 224 --VTPGFIESELT 234
             + PG IE    
Sbjct: 183 NAIAPGPIERTGG 195

>4dyv_A Short-chain dehydrogenase/reductase SDR; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; 1.80A {Xanthobacter autotrophicus} Length = 272

 Score =  178 bits (454), Expect = 1e-55
 Identities = 56/197 (28%), Positives = 97/197 (49%), Gaps = 8/197 (4%)

Query: 44  DVSGKVVIITGASSGIGEHLAYEYARRGACLALCARREKSLEEVADTAREIGSPDVITIR 103
               K+ I+TGA SG+G  +A   A  G  +AL  RR  +L+E   TA EIG  D + + 
Sbjct: 25  KTGKKIAIVTGAGSGVGRAVAVALAGAGYGVALAGRRLDALQE---TAAEIGD-DALCVP 80

Query: 104 ADVSKVDDCRSLVEETMNHFGRLDHLVNNAGISSVALFEDIVNITDFKQIMNINFWGSVY 163
            DV+  D  R+L   T+  FGR+D L NNAG  + A+  + +    +KQ+++ N  G   
Sbjct: 81  TDVTDPDSVRALFTATVEKFGRVDVLFNNAGTGAPAIPMEDLTFAQWKQVVDTNLTGPFL 140

Query: 164 TTRFAVPHLRYTK---GKIVVLSSAASWLTAPRMSFYNASKAALVLFFETLRVELGS-DV 219
            T+ A   ++  +   G+I+   S ++    P  + Y A+K A+    ++  ++    D+
Sbjct: 141 CTQEAFRVMKAQEPRGGRIINNGSISATSPRPYSAPYTATKHAITGLTKSTSLDGRVHDI 200

Query: 220 GVTIVTPGFIESELTQG 236
               +  G  ++ + Q 
Sbjct: 201 ACGQIDIGNADTPMAQK 217

>3ai3_A NADPH-sorbose reductase; rossmann-fold, NADPH-dependent reductase, short chain dehydrogenase/reductase, oxidoreductase; HET: NAP SOL SOE; 1.80A {Gluconobacter frateurii} PDB: 3ai2_A* 3ai1_A* Length = 263

 Score =  177 bits (452), Expect = 2e-55
 Identities = 60/195 (30%), Positives = 95/195 (48%), Gaps = 5/195 (2%)

Query: 44  DVSGKVVIITGASSGIGEHLAYEYARRGACLALCARREKSLEEVADTAREIGSPDVITIR 103
            +SGKV +ITG+SSGIG  +A  +A+ GA + L AR+   L E A + +E     V+ + 
Sbjct: 4   GISGKVAVITGSSSGIGLAIAEGFAKEGAHIVLVARQVDRLHEAARSLKEKFGVRVLEVA 63

Query: 104 ADVSKVDDCRSLVEETMNHFGRLDHLVNNAGISSVALFEDIVNITDFKQIMNINFWGSVY 163
            DV+  +   ++VE   + FG  D LVNNAG  S     +      ++    +    +V 
Sbjct: 64  VDVATPEGVDAVVESVRSSFGGADILVNNAGTGSNETIMEA-ADEKWQFYWELLVMAAVR 122

Query: 164 TTRFAVPHLRYTK-GKIVVLSSAASWLTAPRMSFYNASKAALVLFFETLRVELGSDVGVT 222
             R  VP +R    G I+  +S  +         YN +KAAL++F +TL  E+  D  + 
Sbjct: 123 LARGLVPGMRARGGGAIIHNASICAVQPLWYEPIYNVTKAALMMFSKTLATEVIKD-NIR 181

Query: 223 I--VTPGFIESELTQ 235
           +  + PG I +    
Sbjct: 182 VNCINPGLILTPDWI 196

>1w6u_A 2,4-dienoyl-COA reductase, mitochondrial precursor; short chain dehydrogenase, beta- oxidation, NADP, oxidoreductase; HET: HXC NAP; 1.75A {Homo sapiens} SCOP: c.2.1.2 PDB: 1w73_A* 1w8d_A* Length = 302

 Score =  178 bits (455), Expect = 2e-55
 Identities = 42/209 (20%), Positives = 90/209 (43%), Gaps = 7/209 (3%)

Query: 31  KFLLSVFNSIFSEDV-SGKVVIITGASSGIGEHLAYEYARRGACLALCARREKSLEEVAD 89
           KF   +  ++   +   GKV  ITG  +G+G+ +    +  GA   + +R+   L+  A+
Sbjct: 9   KFFSPLQKAMLPPNSFQGKVAFITGGGTGLGKGMTTLLSSLGAQCVIASRKMDVLKATAE 68

Query: 90  TAREIGSPDVITIRADVSKVDDCRSLVEETMNHFGRLDHLVNNAGISSVALFEDIVNITD 149
                    V  I+ DV   D  ++ V E +   G  + ++NNA  + ++  E + +   
Sbjct: 69  QISSQTGNKVHAIQCDVRDPDMVQNTVSELIKVAGHPNIVINNAAGNFISPTERL-SPNA 127

Query: 150 FKQIMNINFWGSVYTTRFAVPHLRYTK--GKIVVLSSAASWLTAPRMSFYNASKAALVLF 207
           +K I +I   G+ + T      L   +     + +++  +   +  +    ++KA +   
Sbjct: 128 WKTITDIVLNGTAFVTLEIGKQLIKAQKGAAFLSITTIYAETGSGFVVPSASAKAGVEAM 187

Query: 208 FETLRVELGSDVGVTI--VTPGFIESELT 234
            ++L  E G   G+    + PG I+++  
Sbjct: 188 SKSLAAEWGKY-GMRFNVIQPGPIKTKGA 215

>2bd0_A Sepiapterin reductase; oxidoreductase; HET: NAP BIO; 1.70A {Chlorobium tepidum} SCOP: c.2.1.2 Length = 244

 Score =  175 bits (447), Expect = 5e-55
 Identities = 58/198 (29%), Positives = 88/198 (44%), Gaps = 11/198 (5%)

Query: 48  KVVIITGASSGIGEHLAYEYARRGA-------CLALCARREKSLEEVADTAREIGSPDVI 100
            +++ITGA  GIG  +A E+AR           L L +R    LE+++   R  G+    
Sbjct: 3   HILLITGAGKGIGRAIALEFARAARHHPDFEPVLVLSSRTAADLEKISLECRAEGA-LTD 61

Query: 101 TIRADVSKVDDCRSLVEETMNHFGRLDHLVNNAGISSVALFEDIVNITDFKQIMNINFWG 160
           TI AD+S + D R L    +  +G +D LVNNAG+       D +   DF   MN N  G
Sbjct: 62  TITADISDMADVRRLTTHIVERYGHIDCLVNNAGVGRFGALSD-LTEEDFDYTMNTNLKG 120

Query: 161 SVYTTRFAVPHLRYTK-GKIVVLSSAASWLTAPRMSFYNASKAALVLFFETLRVELGSD- 218
           + + T+     +     G I  ++S A+       S Y  SK       ET+R+      
Sbjct: 121 TFFLTQALFALMERQHSGHIFFITSVAATKAFRHSSIYCMSKFGQRGLVETMRLYARKCN 180

Query: 219 VGVTIVTPGFIESELTQG 236
           V +T V PG + + +   
Sbjct: 181 VRITDVQPGAVYTPMWGK 198

>4fc7_A Peroxisomal 2,4-dienoyl-COA reductase; SDR/rossmann fold, peroxisomal beta-oxidation, oxidoreductas; HET: NAP COA; 1.84A {Homo sapiens} PDB: 4fc6_A* Length = 277

 Score =  176 bits (449), Expect = 7e-55
 Identities = 49/212 (23%), Positives = 84/212 (39%), Gaps = 6/212 (2%)

Query: 25  PPFLCYKFLLSVFNSIFSEDV-SGKVVIITGASSGIGEHLAYEYARRGACLALCARREKS 83
           PP +     L  +  +F  D+   KV  ITG  SGIG  +A  + R G    + +R    
Sbjct: 4   PPDVEGDDCLPAYRHLFCPDLLRDKVAFITGGGSGIGFRIAEIFMRHGCHTVIASRSLPR 63

Query: 84  LEEVADTAREIGSPDVITIRADVSKVDDCRSLVEETMNHFGRLDHLVNNAGISSVALFED 143
           +   A           + +  DV       + V++ +  FGR+D L+N A  + +     
Sbjct: 64  VLTAARKLAGATGRRCLPLSMDVRAPPAVMAAVDQALKEFGRIDILINCAAGNFLCPAGA 123

Query: 144 IVNITDFKQIMNINFWGSVYTTRFAVPHL-RYTKGKIVVLSSAASWLTAPRMSFYNASKA 202
           + +   FK +M+I+  G+   +R       R   G IV +++              ++KA
Sbjct: 124 L-SFNAFKTVMDIDTSGTFNVSRVLYEKFFRDHGGVIVNITATLGNRGQALQVHAGSAKA 182

Query: 203 ALVLFFETLRVELGSDVGVTI--VTPGFIESE 232
           A+      L VE G    + +  + PG I   
Sbjct: 183 AVDAMTRHLAVEWGPQ-NIRVNSLAPGPISGT 213

>3zv4_A CIS-2,3-dihydrobiphenyl-2,3-DIOL dehydrogenase; oxidoreductase, short chain dehydrogenase/oxidoreductase, SD comamonas testosteroni; 1.80A {Pandoraea pnomenusa} PDB: 2y99_A* 3zv3_A 2y93_A 3zv5_A* 3zv6_A* 1bdb_A* Length = 281

 Score =  176 bits (448), Expect = 1e-54
 Identities = 52/207 (25%), Positives = 93/207 (44%), Gaps = 8/207 (3%)

Query: 46  SGKVVIITGASSGIGEHLAYEYARRGACLALCARREKSLEEVADTAREIGSPDVITIRAD 105
           +G+V +ITG +SG+G  L   +   GA +A+  +     E + +     G  + + +  D
Sbjct: 4   TGEVALITGGASGLGRALVDRFVAEGARVAVLDKSA---ERLRELEVAHG-GNAVGVVGD 59

Query: 106 VSKVDDCRSLVEETMNHFGRLDHLVNNAGI----SSVALFEDIVNITDFKQIMNINFWGS 161
           V  + D +   E  +  FG++D L+ NAGI    +++A   +      F  I ++N  G 
Sbjct: 60  VRSLQDQKRAAERCLAAFGKIDTLIPNAGIWDYSTALADLPEDKIDAAFDDIFHVNVKGY 119

Query: 162 VYTTRFAVPHLRYTKGKIVVLSSAASWLTAPRMSFYNASKAALVLFFETLRVELGSDVGV 221
           ++  +  +P L  ++G +V   S A +        Y A+K A+V     +  EL   V V
Sbjct: 120 IHAVKACLPALVSSRGSVVFTISNAGFYPNGGGPLYTATKHAVVGLVRQMAFELAPHVRV 179

Query: 222 TIVTPGFIESELTQGKFLTGRRQNSDR 248
             V PG + ++L     L    Q+   
Sbjct: 180 NGVAPGGMNTDLRGPSSLGLSEQSISS 206

>3lf2_A Short chain oxidoreductase Q9HYA2; SDR, SCOR, rossmann fold; HET: NAP; 2.30A {Pseudomonas aeruginosa} PDB: 3lf1_A* Length = 265

 Score =  173 bits (442), Expect = 5e-54
 Identities = 48/197 (24%), Positives = 79/197 (40%), Gaps = 6/197 (3%)

Query: 44  DVSGKVVIITGASSGIGEHLAYEYARRGACLALCARREKSLEEVADTAREIGS-PDVITI 102
           D+S  V ++TG SSGIG          GA +A CAR  + L       R+      +   
Sbjct: 5   DLSEAVAVVTGGSSGIGLATVELLLEAGAAVAFCARDGERLRAAESALRQRFPGARLFAS 64

Query: 103 RADVSKVDDCRSLVEETMNHFGRLDHLVNNAGISSVALFEDIVNITDFKQIMNINFWGSV 162
             DV      R+  E      G    LVNNAG   V+ F +      + + + + F+  +
Sbjct: 65  VCDVLDALQVRAFAEACERTLGCASILVNNAGQGRVSTFAET-TDEAWSEELQLKFFSVI 123

Query: 163 YTTRFAVPHLRYTK-GKIVVLSSAASWLTAPRMSFYNASKAALVLFFETLRVELGSDVGV 221
           +  R  +P L       IV ++S  +    P M   +A++A +     ++  E     GV
Sbjct: 124 HPVRAFLPQLESRADAAIVCVNSLLASQPEPHMVATSAARAGVKNLVRSMAFEFAPK-GV 182

Query: 222 TI--VTPGFIESELTQG 236
            +  +  G +ES   + 
Sbjct: 183 RVNGILIGLVESGQWRR 199

>4egf_A L-xylulose reductase; structural genomics, ssgcid, seattle structural genomics CEN infectious disease, oxidoreductase; 2.30A {Mycobacterium smegmatis} Length = 266

 Score =  173 bits (442), Expect = 5e-54
 Identities = 60/196 (30%), Positives = 84/196 (42%), Gaps = 6/196 (3%)

Query: 44  DVSGKVVIITGASSGIGEHLAYEYARRGACLALCARREKSLEEVADTAREIGSPDVITIR 103
            + GK  +ITGA+ GIG  +A  +A  GA L L  R    L+       E    DV T+ 
Sbjct: 17  RLDGKRALITGATKGIGADIARAFAAAGARLVLSGRDVSELDAARRALGEQFGTDVHTVA 76

Query: 104 ADVSKVDDCRSLVEETMNHFGRLDHLVNNAGISSVALFEDIVNITDFKQIMNINFWGSVY 163
            D+++ D    L       FG LD LVNNAGIS      D  +   F   + +N      
Sbjct: 77  IDLAEPDAPAELARRAAEAFGGLDVLVNNAGISHPQPVVD-TDPQLFDATIAVNLRAPAL 135

Query: 164 TTRFAVPHL--RYTKGKIVVLSSAASWLTAPRMSFYNASKAALVLFFETLRVELGSDVGV 221
                   +      G I+ ++SAA+    P    Y  SKA LV+  + L  ELG   G+
Sbjct: 136 LASAVGKAMVAAGEGGAIITVASAAALAPLPDHYAYCTSKAGLVMATKVLARELGPH-GI 194

Query: 222 TI--VTPGFIESELTQ 235
               V P  + +E+ Q
Sbjct: 195 RANSVCPTVVLTEMGQ 210

>3guy_A Short-chain dehydrogenase/reductase SDR; structural genomics, oxidoreductase, PSI-2, protein structur initiative; 1.90A {Vibrio parahaemolyticus} Length = 230

 Score =  172 bits (439), Expect = 6e-54
 Identities = 45/189 (23%), Positives = 83/189 (43%), Gaps = 9/189 (4%)

Query: 48  KVVIITGASSGIGEHLAYEYARRGACLALCARREKSLEEVADTAREIGSPDVITIRADVS 107
            +++ITGASSG+G  LA  Y   G    L  R E  L  V +    + + +V     D++
Sbjct: 2   SLIVITGASSGLGAELAKLYDAEGKATYLTGRSESKLSTVTN---CLSN-NVGYRARDLA 57

Query: 108 KVDDCRSLVEETMNHFGRLDHLVNNAGISSVALFEDIVNITDFKQIMNINFWGSVYTTRF 167
              +   L E+          +V++AG     L ++  +    + ++  N   ++   R 
Sbjct: 58  SHQEVEQLFEQL---DSIPSTVVHSAGSGYFGLLQEQ-DPEQIQTLIENNLSSAINVLRE 113

Query: 168 AVPHLRYTKGKIVVLSSAASWLTAPRMSFYNASKAALVLFFETLRVEL-GSDVGVTIVTP 226
            V   +     +V++ S A+     + S Y A K A+    E++R+EL G  + +  V P
Sbjct: 114 LVKRYKDQPVNVVMIMSTAAQQPKAQESTYCAVKWAVKGLIESVRLELKGKPMKIIAVYP 173

Query: 227 GFIESELTQ 235
           G + +E  +
Sbjct: 174 GGMATEFWE 182

>4eso_A Putative oxidoreductase; NADP, structural genomics, PSI-biology, NEW structural genomics research consortium, nysgrc; HET: MSE NAP; 1.91A {Sinorhizobium meliloti} PDB: 3vc7_A Length = 255

 Score =  173 bits (440), Expect = 8e-54
 Identities = 59/198 (29%), Positives = 93/198 (46%), Gaps = 9/198 (4%)

Query: 46  SGKVVIITGASSGIGEHLAYEYARRGACLALCARREKSLEEVADTAREIGSPDVITIRAD 105
            GK  I+ G + G+G          GA + L  R E ++  +     E G P V  +R+D
Sbjct: 7   QGKKAIVIGGTHGMGLATVRRLVEGGAEVLLTGRNESNIARIR---EEFG-PRVHALRSD 62

Query: 106 VSKVDDCRSLVEETMNHFGRLDHLVNNAGISSVALFEDIVNITDFKQIMNINFWGSVYTT 165
           ++ +++   L        G +D L  NAG+S +  F+ + +   + +   +N  G+ +T 
Sbjct: 63  IADLNEIAVLGAAAGQTLGAIDLLHINAGVSELEPFDQV-SEASYDRQFAVNTKGAFFTV 121

Query: 166 RFAVPHLRYTKGKIVVLSSAASWLTAPRMSFYNASKAALVLFFETLRVELGSDVGVTI-- 223
           +   P +R   G IV  SS A     P MS Y+ASKAALV F   L  EL    G+ +  
Sbjct: 122 QRLTPLIR-EGGSIVFTSSVADEGGHPGMSVYSASKAALVSFASVLAAELLPR-GIRVNS 179

Query: 224 VTPGFIESELTQGKFLTG 241
           V+PGFI++       +T 
Sbjct: 180 VSPGFIDTPTKGVAGITE 197

>3rkr_A Short chain oxidoreductase; rossmann fold; HET: NAP; 2.42A {Uncultured bacterium BIO5} Length = 262

 Score =  173 bits (440), Expect = 1e-53
 Identities = 54/196 (27%), Positives = 83/196 (42%), Gaps = 5/196 (2%)

Query: 44  DVSGKVVIITGASSGIGEHLAYEYARRGACLALCARREKSLEEVADTAREIGSPDVITIR 103
            +SG+V ++TGAS GIG  +A +    GA + L AR  + L  V       G  +  +  
Sbjct: 26  SLSGQVAVVTGASRGIGAAIARKLGSLGARVVLTARDVEKLRAVEREIVAAGG-EAESHA 84

Query: 104 ADVSKVDDCRSLVEETMNHFGRLDHLVNNAGISSV-ALFEDIVNITDFKQIMNINFWGSV 162
            D+S  D   +     +   GR D LVNNAG+         +    ++  ++ +N     
Sbjct: 85  CDLSHSDAIAAFATGVLAAHGRCDVLVNNAGVGWFGGPLHTM-KPAEWDALIAVNLKAPY 143

Query: 163 YTTRFAVPHLRYTK-GKIVVLSSAASWLTAPRMSFYNASKAALVLFFETLRVELGSD-VG 220
              R   P +   K G I+ +SS A        + Y ASK  L     +   EL    V 
Sbjct: 144 LLLRAFAPAMIAAKRGHIINISSLAGKNPVADGAAYTASKWGLNGLMTSAAEELRQHQVR 203

Query: 221 VTIVTPGFIESELTQG 236
           V++V PG + +E   G
Sbjct: 204 VSLVAPGSVRTEFGVG 219

>1fmc_A 7 alpha-hydroxysteroid dehydrogenase; short-chain dehydrogenase/reductase, bIle acid catabolism, oxidoreductase; HET: CHO NAD; 1.80A {Escherichia coli} SCOP: c.2.1.2 PDB: 1ahi_A* 1ahh_A* Length = 255

 Score =  172 bits (439), Expect = 1e-53
 Identities = 48/195 (24%), Positives = 93/195 (47%), Gaps = 7/195 (3%)

Query: 44  DVSGKVVIITGASSGIGEHLAYEYARRGACLALCARREKSLEEVADTAREIGSPDVITIR 103
            + GK  IITGA +GIG+ +A  +A  GA + +      +   V D  +++G       R
Sbjct: 8   RLDGKCAIITGAGAGIGKEIAITFATAGASVVVSDINADAANHVVDEIQQLGG-QAFACR 66

Query: 104 ADVSKVDDCRSLVEETMNHFGRLDHLVNNAGISSVALFEDIVNITDFKQIMNINFWGSVY 163
            D++   +  +L +  ++  G++D LVNNAG      F+  + + DF++   +N +   +
Sbjct: 67  CDITSEQELSALADFAISKLGKVDILVNNAGGGGPKPFD--MPMADFRRAYELNVFSFFH 124

Query: 164 TTRFAVPH-LRYTKGKIVVLSSAASWLTAPRMSFYNASKAALVLFFETLRVELGSDVGVT 222
            ++   P   +   G I+ ++S A+      M+ Y +SKAA       +  +LG    + 
Sbjct: 125 LSQLVAPEMEKNGGGVILTITSMAAENKNINMTSYASSKAAASHLVRNMAFDLGEK-NIR 183

Query: 223 I--VTPGFIESELTQ 235
           +  + PG I ++  +
Sbjct: 184 VNGIAPGAILTDALK 198

>2jah_A Clavulanic acid dehydrogenase; short-chain dehydrogenase/reductase, lactamase inhibitor, AN biosynthesis, NADPH, oxidoreductase; HET: MSE NDP; 1.80A {Streptomyces clavuligerus} PDB: 2jap_A* Length = 247

 Score =  171 bits (436), Expect = 2e-53
 Identities = 73/194 (37%), Positives = 105/194 (54%), Gaps = 3/194 (1%)

Query: 42  SEDVSGKVVIITGASSGIGEHLAYEYARRGACLALCARREKSLEEVADTAREIGSPDVIT 101
              + GKV +ITGASSGIGE  A   A  GA +A+ ARR + L  + D     G+  V  
Sbjct: 2   PSALQGKVALITGASSGIGEATARALAAEGAAVAIAARRVEKLRALGDELTAAGA-KVHV 60

Query: 102 IRADVSKVDDCRSLVEETMNHFGRLDHLVNNAGISSVALFEDIVNITDFKQIMNINFWGS 161
           +  DV+      + V  T+   G LD LVNNAGI  +   ED  + TD+ ++++ N  G 
Sbjct: 61  LELDVADRQGVDAAVASTVEALGGLDILVNNAGIMLLGPVEDA-DTTDWTRMIDTNLLGL 119

Query: 162 VYTTRFAVPHLRYTKGKIVVLSSAASWLTAPRMSFYNASKAALVLFFETLRVEL-GSDVG 220
           +Y TR A+PHL  +KG +V +SS A  +     + Y A+K  +  F ETLR E+    V 
Sbjct: 120 MYMTRAALPHLLRSKGTVVQMSSIAGRVNVRNAAVYQATKFGVNAFSETLRQEVTERGVR 179

Query: 221 VTIVTPGFIESELT 234
           V ++ PG  ++EL 
Sbjct: 180 VVVIEPGTTDTELR 193

>2ehd_A Oxidoreductase, oxidoreductase, short-chain dehydrogenase/reducta; rossman fold, structural genomics, NPPSFA; 2.40A {Thermus thermophilus} Length = 234

 Score =  170 bits (433), Expect = 5e-53
 Identities = 57/190 (30%), Positives = 88/190 (46%), Gaps = 8/190 (4%)

Query: 47  GKVVIITGASSGIGEHLAYEYARRGACLALCARREKSLEEVADTAREIGSPDVITIRADV 106
              V+ITGAS GIGE  A     +G  + L AR EK L+ +A    E+     + +  DV
Sbjct: 5   KGAVLITGASRGIGEATARLLHAKGYRVGLMARDEKRLQALAA---ELE--GALPLPGDV 59

Query: 107 SKVDDCRSLVEETMNHFGRLDHLVNNAGISSVALFEDIVNITDFKQIMNINFWGSVYTTR 166
            +  D    V      FG L  LVNNAG+  +    + + + +++ +++ N  G+    R
Sbjct: 60  REEGDWARAVAAMEEAFGELSALVNNAGVGVMKPVHE-LTLEEWRLVLDTNLTGAFLGIR 118

Query: 167 FAVPHLRYTK-GKIVVLSSAASWLTAPRMSFYNASKAALVLFFETLRVEL-GSDVGVTIV 224
            AVP L     G IV + S A        + YNASK  L+       ++L  ++V V  V
Sbjct: 119 HAVPALLRRGGGTIVNVGSLAGKNPFKGGAAYNASKFGLLGLAGAAMLDLREANVRVVNV 178

Query: 225 TPGFIESELT 234
            PG +++   
Sbjct: 179 LPGSVDTGFA 188

>4dry_A 3-oxoacyl-[acyl-carrier-protein] reductase; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; 2.50A {Sinorhizobium meliloti} Length = 281

 Score =  170 bits (434), Expect = 1e-52
 Identities = 43/197 (21%), Positives = 81/197 (41%), Gaps = 4/197 (2%)

Query: 44  DVSGKVVIITGASSGIGEHLAYEYARRGACLALCARREKSLEEVADTAREIGSPDVITIR 103
              G++ ++TG  +G+G  +A   +  G  + +  RR   L+  A          V  + 
Sbjct: 30  SGEGRIALVTGGGTGVGRGIAQALSAEGYSVVITGRRPDVLDAAAGEIGGRTGNIVRAVV 89

Query: 104 ADVSKVDDCRSLVEETMNHFGRLDHLVNNAGISSVALFEDIVNITDFKQIMNINFWGSVY 163
            DV   D   +L       F RLD LVNNAG +   +  + V    +  I+  N  G+  
Sbjct: 90  CDVGDPDQVAALFAAVRAEFARLDLLVNNAGSNVPPVPLEEVTFEQWNGIVAANLTGAFL 149

Query: 164 TTRFAVPHLR---YTKGKIVVLSSAASWLTAPRMSFYNASKAALVLFFETLRVELGS-DV 219
            T+ A   ++      G+I+   S ++    P  + Y A+K A+    ++  ++    D+
Sbjct: 150 CTQHAFRMMKAQTPRGGRIINNGSISAQTPRPNSAPYTATKHAITGLTKSTALDGRMHDI 209

Query: 220 GVTIVTPGFIESELTQG 236
               +  G   +++T  
Sbjct: 210 ACGQIDIGNAATDMTAR 226

>1zem_A Xylitol dehydrogenase; rossmann fold, dinucleotide-binding domain, oxidoreductase; HET: NAD; 1.90A {Gluconobacter oxydans} SCOP: c.2.1.2 Length = 262

 Score =  170 bits (432), Expect = 2e-52
 Identities = 53/211 (25%), Positives = 97/211 (45%), Gaps = 7/211 (3%)

Query: 42  SEDVSGKVVIITGASSGIGEHLAYEYARRGACLALCARREKSLEEVADTAREIGSPDVIT 101
           S+  +GKV ++TGA   IG   A   A  G  +AL     ++LE+   + RE G  +  +
Sbjct: 2   SKKFNGKVCLVTGAGGNIGLATALRLAEEGTAIALLDMNREALEKAEASVREKG-VEARS 60

Query: 102 IRADVSKVDDCRSLVEETMNHFGRLDHLVNNAGIS-SVALFEDIVNITDFKQIMNINFWG 160
              DV+  +     V+  +  FG++D L NNAG   + A  +D     DF +++ IN  G
Sbjct: 61  YVCDVTSEEAVIGTVDSVVRDFGKIDFLFNNAGYQGAFAPVQDY-PSDDFARVLTINVTG 119

Query: 161 SVYTTRFAVPHLRYTK-GKIVVLSSAASWLTAPRMSFYNASKAALVLFFETLRVELGSDV 219
           + +  +     +     G+IV  +S A     P M+ Y  SK A++   ET  ++L    
Sbjct: 120 AFHVLKAVSRQMITQNYGRIVNTASMAGVKGPPNMAAYGTSKGAIIALTETAALDLAPY- 178

Query: 220 GVTI--VTPGFIESELTQGKFLTGRRQNSDR 248
            + +  ++PG++       + +  + +   +
Sbjct: 179 NIRVNAISPGYMGPGFMWERQVELQAKVGSQ 209

>3v8b_A Putative dehydrogenase, possibly 3-oxoacyl-[acyl- protein] reductase; PSI-biology, structural genomics, protein structure initiati nysgrc; 2.70A {Sinorhizobium meliloti} Length = 283

 Score =  170 bits (433), Expect = 2e-52
 Identities = 68/211 (32%), Positives = 100/211 (47%), Gaps = 9/211 (4%)

Query: 44  DVSGKVVIITGASSGIGEHLAYEYARRGACLALCARREKSLEEVADTAREIGSPDVITIR 103
           +    V +ITGA SGIG   A   A  G  +    R    +EEVAD     G    I + 
Sbjct: 25  NQPSPVALITGAGSGIGRATALALAADGVTVGALGRTRTEVEEVADEIVGAGG-QAIALE 83

Query: 104 ADVSKVDDCRSLVEETMNHFGRLDHLVNNAGISSV-ALFEDIVNITDFKQIMNINFWGSV 162
           ADVS     R+ V + +  FG LD +V NAGI+ V A  +D+    ++ + + +N  G+ 
Sbjct: 84  ADVSDELQMRNAVRDLVLKFGHLDIVVANAGINGVWAPIDDL-KPFEWDETIAVNLRGTF 142

Query: 163 YTTRFAVPHLRYTK-GKIVVLSSAA--SWLTAPRMSFYNASKAALVLFFETLRVELGSDV 219
            T    VP+L+    G IVV+SS       T P  + Y A+KAA V   + L +ELG   
Sbjct: 143 LTLHLTVPYLKQRGGGAIVVVSSINGTRTFTTPGATAYTATKAAQVAIVQQLALELGKH- 201

Query: 220 GVTI--VTPGFIESELTQGKFLTGRRQNSDR 248
            + +  V PG IE+ ++    L    + +  
Sbjct: 202 HIRVNAVCPGAIETNISDNTKLRHEEETAIP 232

>1yxm_A Pecra, peroxisomal trans 2-enoyl COA reductase; perioxisomes, fatty acid synthesis, short-chain dehydrogenases/reductases, structural genomics; HET: ADE; 1.90A {Homo sapiens} SCOP: c.2.1.2 Length = 303

 Score =  170 bits (434), Expect = 3e-52
 Identities = 48/207 (23%), Positives = 95/207 (45%), Gaps = 9/207 (4%)

Query: 39  SIFSEDV-SGKVVIITGASSGIGEHLAYEYARRGACLALCARREKSLEEVADTAREIGSP 97
           S  +  +  G+V I+TG ++GIG+ +  E    G+ + + +R+ + L+  AD  +    P
Sbjct: 9   SYLAPGLLQGQVAIVTGGATGIGKAIVKELLELGSNVVIASRKLERLKSAADELQANLPP 68

Query: 98  ----DVITIRADVSKVDDCRSLVEETMNHFGRLDHLVNNAGISSVALFEDIVNITDFKQI 153
                VI I+ ++   ++  +LV+ T++ FG+++ LVNN G   ++  E I +   +  +
Sbjct: 69  TKQARVIPIQCNIRNEEEVNNLVKSTLDTFGKINFLVNNGGGQFLSPAEHI-SSKGWHAV 127

Query: 154 MNINFWGSVYTTRFAVPHLRYTKGKIVVLSSAASWLTAPRMSFYNASKAALVLFFETLRV 213
           +  N  G+ Y  +          G  +V     +    P      A++A +    ++L +
Sbjct: 128 LETNLTGTFYMCKAVYSSWMKEHGGSIVNIIVPTKAGFPLAVHSGAARAGVYNLTKSLAL 187

Query: 214 ELGSDVGVTI--VTPGFIESELTQGKF 238
           E     G+ I  V PG I S+     +
Sbjct: 188 EWACS-GIRINCVAPGVIYSQTAVENY 213

>3tfo_A Putative 3-oxoacyl-(acyl-carrier-protein) reducta; structural genomics, PSI-biology, NEW YORK structural genomi research consortium; 2.08A {Sinorhizobium meliloti} Length = 264

 Score =  169 bits (430), Expect = 3e-52
 Identities = 58/195 (29%), Positives = 104/195 (53%), Gaps = 4/195 (2%)

Query: 45  VSGKVVIITGASSGIGEHLAYEYARRGACLALCARREKSLEEVADTAREIGSPDVITIRA 104
           V  KV++ITGAS GIGE +A E    GA + L ARR+  +E +A   R+ G    +    
Sbjct: 2   VMDKVILITGASGGIGEGIARELGVAGAKILLGARRQARIEAIATEIRDAGG-TALAQVL 60

Query: 105 DVSKVDDCRSLVEETMNHFGRLDHLVNNAGISSVALFEDIVNITDFKQIMNINFWGSVYT 164
           DV+      +  +  ++ +GR+D LVNNAG+  ++    +  + ++++++++N  G ++ 
Sbjct: 61  DVTDRHSVAAFAQAAVDTWGRIDVLVNNAGVMPLSPLAAV-KVDEWERMIDVNIKGVLWG 119

Query: 165 TRFAVPHLRYTK-GKIVVLSSAASWLTAPRMSFYNASKAALVLFFETLRVELGSDVGVTI 223
               +P +   + G+I+ + S  +    P  + Y A+K A+    + LR E  +++ VT 
Sbjct: 120 IGAVLPIMEAQRSGQIINIGSIGALSVVPTAAVYCATKFAVRAISDGLRQE-STNIRVTC 178

Query: 224 VTPGFIESELTQGKF 238
           V PG +ESEL     
Sbjct: 179 VNPGVVESELAGTIT 193

>2zat_A Dehydrogenase/reductase SDR family member 4; alpha/beta, oxidoreductase; HET: NAP; 1.50A {Sus scrofa} PDB: 3o4r_A* Length = 260

 Score =  168 bits (429), Expect = 5e-52
 Identities = 53/197 (26%), Positives = 102/197 (51%), Gaps = 9/197 (4%)

Query: 44  DVSGKVVIITGASSGIGEHLAYEYARRGACLALCARREKSLEEVADTAREIGSPDVITIR 103
            +  KV ++T ++ GIG  +A   A+ GA + + +R++++++    T +  G   V    
Sbjct: 11  PLENKVALVTASTDGIGLAIARRLAQDGAHVVVSSRKQENVDRTVATLQGEGL-SVTGTV 69

Query: 104 ADVSKVDDCRSLVEETMNHFGRLDHLVNNAGISSVALFEDIVNIT--DFKQIMNINFWGS 161
             V K +D   LV   +N  G +D LV+NA ++    F +I++ T   + +I+++N   +
Sbjct: 70  CHVGKAEDRERLVAMAVNLHGGVDILVSNAAVNPF--FGNIIDATEEVWDKILHVNVKAT 127

Query: 162 VYTTRFAVPHLRYTK-GKIVVLSSAASWLTAPRMSFYNASKAALVLFFETLRVELGSDVG 220
           V  T+  VP +     G ++++SS  ++   P +  YN SK AL+   + L VEL     
Sbjct: 128 VLMTKAVVPEMEKRGGGSVLIVSSVGAYHPFPNLGPYNVSKTALLGLTKNLAVELAPR-N 186

Query: 221 VTI--VTPGFIESELTQ 235
           + +  + PG I++  +Q
Sbjct: 187 IRVNCLAPGLIKTNFSQ 203

>3e9n_A Putative short-chain dehydrogenase/reductase; structural genomics, unknown function, oxidoreductase, PSI- 2; 2.40A {Corynebacterium glutamicum} Length = 245

 Score =  168 bits (428), Expect = 5e-52
 Identities = 44/194 (22%), Positives = 88/194 (45%), Gaps = 10/194 (5%)

Query: 44  DVSGKVVIITGASSGIGEHLAYEYARRGACLALCARREKSLEEVADTAREIGSPDVITIR 103
            +  K+ ++TGA+ G+G  +  + +R    +    R  + L  +A+     G   V  I 
Sbjct: 2   SLKKKIAVVTGATGGMGIEIVKDLSRDHI-VYALGRNPEHLAALAE---IEG---VEPIE 54

Query: 104 ADVSKVDDCRSLVEETMNHFGRLDHLVNNAGISSVALFEDIVNITDFKQIMNINFWGSVY 163
           +D+ K       V+  + +   +D LV+ A ++     E   ++ ++   +++N      
Sbjct: 55  SDIVKEVLEEGGVD-KLKNLDHVDTLVHAAAVARDTTIEA-GSVAEWHAHLDLNVIVPAE 112

Query: 164 TTRFAVPHLRYTKGKIVVLSSAASWLTAPRMSFYNASKAALVLFFETLRVELGSD-VGVT 222
            +R  +P LR   G ++ ++S A     P  + Y ASK AL    +  R E  ++ + V+
Sbjct: 113 LSRQLLPALRAASGCVIYINSGAGNGPHPGNTIYAASKHALRGLADAFRKEEANNGIRVS 172

Query: 223 IVTPGFIESELTQG 236
            V+PG   + + QG
Sbjct: 173 TVSPGPTNTPMLQG 186

>4dqx_A Probable oxidoreductase protein; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; 2.00A {Rhizobium etli} Length = 277

 Score =  169 bits (430), Expect = 5e-52
 Identities = 59/198 (29%), Positives = 97/198 (48%), Gaps = 9/198 (4%)

Query: 42  SEDVSGKVVIITGASSGIGEHLAYEYARRGACLALCARREKSLEEVADTAREIGSPDVIT 101
           S D++ +V I+TG  SGIG   A  +A+ GA + +    E +   VA+   EIGS     
Sbjct: 22  SMDLNQRVCIVTGGGSGIGRATAELFAKNGAYVVVADVNEDAAVRVAN---EIGS-KAFG 77

Query: 102 IRADVSKVDDCRSLVEETMNHFGRLDHLVNNAGISSVALFEDIVNITDFKQIMNINFWGS 161
           +R DVS   D  S+VE+T   +GR+D LVNNAG  +       +    + +IM++N  G 
Sbjct: 78  VRVDVSSAKDAESMVEKTTAKWGRVDVLVNNAGFGTTGNVVT-IPEETWDRIMSVNVKGI 136

Query: 162 VYTTRFAVPHLRYT-KGKIVVLSSAASWLTAPRMSFYNASKAALVLFFETLRVELGSDVG 220
              +++ +P +R    G I+  +S  +       + Y ASK A+      + ++   + G
Sbjct: 137 FLCSKYVIPVMRRNGGGSIINTTSYTATSAIADRTAYVASKGAISSLTRAMAMDHAKE-G 195

Query: 221 VTI--VTPGFIESELTQG 236
           + +  V PG I+S     
Sbjct: 196 IRVNAVAPGTIDSPYFTK 213

>2yut_A Putative short-chain oxidoreductase; alpha and beta proteins (A/B), NAD(P)-binding rossmann-fold structural genomics, NPPSFA; HET: NAP; 2.20A {Thermus thermophilus} Length = 207

 Score =  166 bits (424), Expect = 5e-52
 Identities = 49/188 (26%), Positives = 85/188 (45%), Gaps = 19/188 (10%)

Query: 50  VIITGASSGIGEHLAYEYARRGACLALCARREKSLEEVADTAREIGSPDVITIRADVSKV 109
           V+ITGA+ G+G   A   A +G  L L  RR  +L E+A    E+G      + AD++  
Sbjct: 3   VLITGATGGLGGAFAR--ALKGHDLLLSGRRAGALAELAR---EVG---ARALPADLADE 54

Query: 110 DDCRSLVEETMNHFGRLDHLVNNAGISSVALFEDIVNITDFKQIMNINFWGSVYTTRFAV 169
            + ++L+EE     G LD LV+  G +  A   +       ++++  +         F +
Sbjct: 55  LEAKALLEE----AGPLDLLVHAVGKAGRASVREA-GRDLVEEMLAAHLLT----AAFVL 105

Query: 170 PHLRYTK-GKIVVLSSAASWLTAPRMSFYNASKAALVLFFETLRVELGSD-VGVTIVTPG 227
            H R+ K  + V   +   ++  P  + Y A+K AL  + E  R EL  + V + +V   
Sbjct: 106 KHARFQKGARAVFFGAYPRYVQVPGFAAYAAAKGALEAYLEAARKELLREGVHLVLVRLP 165

Query: 228 FIESELTQ 235
            + + L  
Sbjct: 166 AVATGLWA 173

>3n74_A 3-ketoacyl-(acyl-carrier-protein) reductase; seattle structural genomics center for infectious disease, S brucellosis; 2.20A {Brucella melitensis biovar abortus} Length = 261

 Score =  168 bits (428), Expect = 7e-52
 Identities = 61/202 (30%), Positives = 100/202 (49%), Gaps = 12/202 (5%)

Query: 44  DVSGKVVIITGASSGIGEHLAYEYARRGACLALCARREKSLEEVADTAREIGSPDVITIR 103
            + GKV +ITGA SG GE +A  +A+ GA + +  R +   E VA    EIG    + + 
Sbjct: 6   SLEGKVALITGAGSGFGEGMAKRFAKGGAKVVIVDRDKAGAERVAG---EIGD-AALAVA 61

Query: 104 ADVSKVDDCRSLVEETMNHFGRLDHLVNNAGISSVALFEDIVNITDFKQIMNINFWGSVY 163
           AD+SK  D  + VE  ++ FG++D LVNNAGI       ++V   +F +I+ +N  G   
Sbjct: 62  ADISKEADVDAAVEAALSKFGKVDILVNNAGIGHKPQNAELVEPEEFDRIVGVNVRGVYL 121

Query: 164 TTRFAVPHLRYTKG-----KIVVLSSAASWLTAPRMSFYNASKAALVLFFETLRVELGSD 218
            T   +PH +          I+ ++S  +    P +++YNA+K  +V   + L +EL   
Sbjct: 122 MTSKLIPHFKENGAKGQECVILNVASTGAGRPRPNLAWYNATKGWVVSVTKALAIELAPA 181

Query: 219 VGVTI--VTPGFIESELTQGKF 238
             + +  + P   E+ L     
Sbjct: 182 -KIRVVALNPVAGETPLLTTFM 202

>2cfc_A 2-(R)-hydroxypropyl-COM dehydrogenase; NAD, oxidoreductase; HET: NAD KPC; 1.8A {Xanthobacter autotrophicus} Length = 250

 Score =  168 bits (427), Expect = 7e-52
 Identities = 64/195 (32%), Positives = 98/195 (50%), Gaps = 6/195 (3%)

Query: 47  GKVVIITGASSGIGEHLAYEYARRGACLALCARREKSLEEVADTAREIGSPDVITIRADV 106
            +V I+TGASSG G  +A  +  RG  +A      ++LEE A T     +  V+ +RADV
Sbjct: 2   SRVAIVTGASSGNGLAIATRFLARGDRVAALDLSAETLEETARTHWHAYADKVLRVRADV 61

Query: 107 SKVDDCRSLVEETMNHFGRLDHLVNNAGISSVALFEDIVNIT--DFKQIMNINFWGSVYT 164
           +   D  + +  TM  FG +D LVNNAGI+  +    +       F ++M +N  G    
Sbjct: 62  ADEGDVNAAIAATMEQFGAIDVLVNNAGITGNSEAGVLHTTPVEQFDKVMAVNVRGIFLG 121

Query: 165 TRFAVPHLRYTK-GKIVVLSSAASWLTAPRMSFYNASKAALVLFFETLRVELGSDVGVTI 223
            R  +PH+     G IV ++S AS +  P  S Y  SK A++   +++ V+     G+  
Sbjct: 122 CRAVLPHMLLQGAGVIVNIASVASLVAFPGRSAYTTSKGAVLQLTKSVAVDYAGS-GIRC 180

Query: 224 --VTPGFIESELTQG 236
             V PG IE+ +TQ 
Sbjct: 181 NAVCPGMIETPMTQW 195

>1ae1_A Tropinone reductase-I; oxidoreductase, tropane alkaloid biosynthesis, reduction of tropinone to tropine, short-chain dehydrogenase; HET: NAP; 2.40A {Datura stramonium} SCOP: c.2.1.2 Length = 273

 Score =  167 bits (425), Expect = 2e-51
 Identities = 61/197 (30%), Positives = 99/197 (50%), Gaps = 7/197 (3%)

Query: 44  DVSGKVVIITGASSGIGEHLAYEYARRGACLALCARREKSLEEVADTAREIGSPDVITIR 103
            + G   ++TG S GIG  +  E A  GA +  C+R EK L+E  +  RE G  +V    
Sbjct: 18  SLKGTTALVTGGSKGIGYAIVEELAGLGARVYTCSRNEKELDECLEIWREKGL-NVEGSV 76

Query: 104 ADVSKVDDCRSLVEETMNHF-GRLDHLVNNAGISSVALFEDIVNITDFKQIMNINFWGSV 162
            D+    +   L++   + F G+L+ LVNNAG+      +D     D+  IM  NF  + 
Sbjct: 77  CDLLSRTERDKLMQTVAHVFDGKLNILVNNAGVVIHKEAKD-FTEKDYNIIMGTNFEAAY 135

Query: 163 YTTRFAVPHLRYTK-GKIVVLSSAASWLTAPRMSFYNASKAALVLFFETLRVELGSDVGV 221
           + ++ A P L+ ++ G ++ LSS A +   P +S Y+ASK A+    ++L  E   D  +
Sbjct: 136 HLSQIAYPLLKASQNGNVIFLSSIAGFSALPSVSLYSASKGAINQMTKSLACEWAKD-NI 194

Query: 222 TI--VTPGFIESELTQG 236
            +  V PG I + L + 
Sbjct: 195 RVNSVAPGVILTPLVET 211

>1gee_A Glucose 1-dehydrogenase; short-chain dehydrogenase/reductase, oxidoreductase; HET: NAD; 1.60A {Bacillus megaterium} SCOP: c.2.1.2 PDB: 1rwb_A* 1gco_A* 1g6k_A* 3aus_A 3aut_A* 3auu_A* Length = 261

 Score =  166 bits (424), Expect = 3e-51
 Identities = 56/204 (27%), Positives = 109/204 (53%), Gaps = 8/204 (3%)

Query: 42  SEDVSGKVVIITGASSGIGEHLAYEYARRGACLALC-ARREKSLEEVADTAREIGSPDVI 100
            +D+ GKVV+ITG+S+G+G+ +A  +A   A + +    +E     V +  +++G  + I
Sbjct: 2   YKDLEGKVVVITGSSTGLGKSMAIRFATEKAKVVVNYRSKEDEANSVLEEIKKVGG-EAI 60

Query: 101 TIRADVSKVDDCRSLVEETMNHFGRLDHLVNNAGISSVALFEDIVNITDFKQIMNINFWG 160
            ++ DV+   D  +LV+  +  FG+LD ++NNAG+ +     ++ +++D+ ++++ N  G
Sbjct: 61  AVKGDVTVESDVINLVQSAIKEFGKLDVMINNAGLENPVSSHEM-SLSDWNKVIDTNLTG 119

Query: 161 SVYTTRFAVPHL--RYTKGKIVVLSSAASWLTAPRMSFYNASKAALVLFFETLRVELGSD 218
           +   +R A+ +      KG ++ +SS    +  P    Y ASK  + L  ETL +E    
Sbjct: 120 AFLGSREAIKYFVENDIKGTVINMSSVHEKIPWPLFVHYAASKGGMKLMTETLALEYAPK 179

Query: 219 VGVTI--VTPGFIESELTQGKFLT 240
            G+ +  + PG I + +   KF  
Sbjct: 180 -GIRVNNIGPGAINTPINAEKFAD 202

>1yde_A Retinal dehydrogenase/reductase 3; oxidoreductase, structural genomics, structural genomics CON SGC; 2.40A {Homo sapiens} SCOP: c.2.1.2 Length = 270

 Score =  166 bits (424), Expect = 3e-51
 Identities = 56/193 (29%), Positives = 100/193 (51%), Gaps = 8/193 (4%)

Query: 46  SGKVVIITGASSGIGEHLAYEYARRGACLALCARREKSLEEVADTAREIGSPDVITIRAD 105
           +GKVV++TG   GIG  +   +   GA + +C + E     +     E+     + I  D
Sbjct: 8   AGKVVVVTGGGRGIGAGIVRAFVNSGARVVICDKDESGGRALEQ---ELP--GAVFILCD 62

Query: 106 VSKVDDCRSLVEETMNHFGRLDHLVNNAGISSVALFEDIVNITDFKQIMNINFWGSVYTT 165
           V++ DD ++LV ET+  FGRLD +VNNAG        +  +   F+Q++ +N  G+   T
Sbjct: 63  VTQEDDVKTLVSETIRRFGRLDCVVNNAGHHPPPQRPEETSAQGFRQLLELNLLGTYTLT 122

Query: 166 RFAVPHLRYTKGKIVVLSSAASWLTAPRMSFYNASKAALVLFFETLRVELGSDVGVTI-- 223
           + A+P+LR ++G ++ +SS    +   +   Y A+K A+    + L ++     GV +  
Sbjct: 123 KLALPYLRKSQGNVINISSLVGAIGQAQAVPYVATKGAVTAMTKALALDESPY-GVRVNC 181

Query: 224 VTPGFIESELTQG 236
           ++PG I + L + 
Sbjct: 182 ISPGNIWTPLWEE 194

>4e6p_A Probable sorbitol dehydrogenase (L-iditol 2-dehyd; NAD(P)-binding, structural genomics, PSI-biology; HET: MSE; 2.10A {Sinorhizobium meliloti} PDB: 1k2w_A Length = 259

 Score =  166 bits (423), Expect = 4e-51
 Identities = 56/199 (28%), Positives = 100/199 (50%), Gaps = 14/199 (7%)

Query: 44  DVSGKVVIITGASSGIGEHLAYEYARRGACLALCARREKSLEEVADTAREIGSPDVITIR 103
            + GK  +ITG++ GIG   A  Y R GA +A+       +E     A EIG P    ++
Sbjct: 5   RLEGKSALITGSARGIGRAFAEAYVREGATVAIADI---DIERARQAAAEIG-PAAYAVQ 60

Query: 104 ADVSKVDDCRSLVEETMNHFGRLDHLVNNAGISSVALFEDIVNIT--DFKQIMNINFWGS 161
            DV++ D   + +  T+ H G LD LVNNA +  +A   +   IT   ++++  IN  G+
Sbjct: 61  MDVTRQDSIDAAIAATVEHAGGLDILVNNAALFDLAPIVE---ITRESYEKLFAINVAGT 117

Query: 162 VYTTRFAVPHL--RYTKGKIVVLSSAASWLTAPRMSFYNASKAALVLFFETLRVELGSDV 219
           ++T + A   +  +   GKI+ ++S A       ++ Y A+KAA++   ++  ++L    
Sbjct: 118 LFTLQAAARQMIAQGRGGKIINMASQAGRRGEALVAIYCATKAAVISLTQSAGLDLIKH- 176

Query: 220 GVTI--VTPGFIESELTQG 236
            + +  + PG ++ E   G
Sbjct: 177 RINVNAIAPGVVDGEHWDG 195

>4fn4_A Short chain dehydrogenase; NADH-binding, rossmann fold, oxidoreductase; HET: NAD; 1.75A {Sulfolobus acidocaldarius} Length = 254

 Score =  166 bits (422), Expect = 4e-51
 Identities = 55/198 (27%), Positives = 98/198 (49%), Gaps = 7/198 (3%)

Query: 43  EDVSGKVVIITGASSGIGEHLAYEYARRGACLALCARREKSLEEVADTAREIGSPDVITI 102
           + +  KVVI+TGA SGIG  +A ++A   + +      E  L ++    R +G  +V+ +
Sbjct: 3   QSLKNKVVIVTGAGSGIGRAIAKKFALNDSIVVAVELLEDRLNQIVQELRGMGK-EVLGV 61

Query: 103 RADVSKVDDCRSLVEETMNHFGRLDHLVNNAGISS-VALFEDIVNITDFKQIMNINFWGS 161
           +ADVSK  D    V  T   + R+D L NNAGI   V    ++ +   +++++ +N + +
Sbjct: 62  KADVSKKKDVEEFVRRTFETYSRIDVLCNNAGIMDGVTPVAEV-SDELWERVLAVNLYSA 120

Query: 162 VYTTRFAVPH-LRYTKGKIVVLSSAASWLTAPRMSFYNASKAALVLFFETLRVELGSDVG 220
            Y++R  +P  L+  KG IV  +S A        + Y  +K  L+    ++    G   G
Sbjct: 121 FYSSRAVIPIMLKQGKGVIVNTASIAGIRGGFAGAPYTVAKHGLIGLTRSIAAHYGDQ-G 179

Query: 221 VTI--VTPGFIESELTQG 236
           +    V PG +++ +  G
Sbjct: 180 IRAVAVLPGTVKTNIGLG 197

>3h7a_A Short chain dehydrogenase; oxidoreductase, PSI-2, NYSGXRC, structural genomics, protein structure initiative; 1.87A {Rhodopseudomonas palustris} Length = 252

 Score =  165 bits (421), Expect = 5e-51
 Identities = 30/201 (14%), Positives = 71/201 (35%), Gaps = 8/201 (3%)

Query: 42  SEDVSGKVVIITGASSGIGEHLAYEYARRGACLALCARREKSLEEVADTAREIGSPDVIT 101
           S       V + GA   IG  +A ++A  G  +    R  + L  +       G   ++ 
Sbjct: 2   SLTPRNATVAVIGAGDYIGAEIAKKFAAEGFTVFAGRRNGEKLAPLVAEIEAAGG-RIVA 60

Query: 102 IRADVSKVDDCRSLVEETMNHFGRLDHLVNNAGISSVALFEDIVNITDFKQIMNINFWGS 161
              D    D+  + +    +    L+  + N G +      +      F+++  +  W  
Sbjct: 61  RSLDARNEDEVTAFLNAA-DAHAPLEVTIFNVGANVNFPILET-TDRVFRKVWEMACWAG 118

Query: 162 VYTTRFAVPH-LRYTKGKIVVLSSAASWLTAPRMSFYNASKAALVLFFETLRVELGSDVG 220
             + R +    L + +GKI    + AS       + + ++K  L    +++  EL     
Sbjct: 119 FVSGRESARLMLAHGQGKIFFTGATASLRGGSGFAAFASAKFGLRAVAQSMARELMPK-N 177

Query: 221 VT---IVTPGFIESELTQGKF 238
           +    ++    +++   + + 
Sbjct: 178 IHVAHLIIDSGVDTAWVRERR 198

>3f1l_A Uncharacterized oxidoreductase YCIK; E. coli, NADP+,; 0.95A {Escherichia coli K12} PDB: 3f1k_A 3e9q_A* 3f5q_A 3gz4_A* 3f5s_A 3gy0_A* 3iah_A* 3g1t_A Length = 252

 Score =  165 bits (420), Expect = 9e-51
 Identities = 49/193 (25%), Positives = 84/193 (43%), Gaps = 3/193 (1%)

Query: 46  SGKVVIITGASSGIGEHLAYEYARRGACLALCARREKSLEEVADTAREIG--SPDVITIR 103
           + +++++TGAS GIG   A  YAR GA + L  R E+ L +VA    E     P    + 
Sbjct: 11  NDRIILVTGASDGIGREAAMTYARYGATVILLGRNEEKLRQVASHINEETGRQPQWFILD 70

Query: 104 ADVSKVDDCRSLVEETMNHFGRLDHLVNNAGISSVALFEDIVNITDFKQIMNINFWGSVY 163
                 ++C+ L +    ++ RLD +++NAG+          N   ++ +M +N   +  
Sbjct: 71  LLTCTSENCQQLAQRIAVNYPRLDGVLHNAGLLGDVCPMSEQNPQVWQDVMQVNVNATFM 130

Query: 164 TTRFAVPHLRYTK-GKIVVLSSAASWLTAPRMSFYNASKAALVLFFETLRVELGSDVGVT 222
            T+  +P L  +  G +V  SS+           Y ASK A     + L  E    + V 
Sbjct: 131 LTQALLPLLLKSDAGSLVFTSSSVGRQGRANWGAYAASKFATEGMMQVLADEYQQRLRVN 190

Query: 223 IVTPGFIESELTQ 235
            + PG   + +  
Sbjct: 191 CINPGGTRTAMRA 203

>3tox_A Short chain dehydrogenase; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc, oxidoreductase; HET: NAP; 1.93A {Sinorhizobium meliloti} Length = 280

 Score =  166 bits (422), Expect = 9e-51
 Identities = 56/201 (27%), Positives = 92/201 (45%), Gaps = 10/201 (4%)

Query: 44  DVSGKVVIITGASSGIGEHLAYEYARRGACLALCARREKSLEEVADTAREIGSPDVITIR 103
            + GK+ I+TGASSGIG   A  +AR GA + + AR   +L E+ D     G  +   + 
Sbjct: 5   RLEGKIAIVTGASSGIGRAAALLFAREGAKVVVTARNGNALAELTDEIAGGGG-EAAALA 63

Query: 104 ADVSKVDDCRSLVEETMNHFGRLDHLVNNAGISSVALFEDIVNIT--DFKQIMNINFWGS 161
            DV       +LVE  +  FG LD   NNAG        +I +++   +++ ++ N   +
Sbjct: 64  GDVGDEALHEALVELAVRRFGGLDTAFNNAGALGA--MGEISSLSVEGWRETLDTNLTSA 121

Query: 162 VYTTRFAVPHLRYT-KGKIVVLSSAASWLTA-PRMSFYNASKAALVLFFETLRVELGSDV 219
               ++ VP +     G +   SS          ++ Y ASKA L+   + L VELG+  
Sbjct: 122 FLAAKYQVPAIAALGGGSLTFTSSFVGHTAGFAGVAPYAASKAGLIGLVQALAVELGAR- 180

Query: 220 GVTI--VTPGFIESELTQGKF 238
           G+ +  + PG  ++       
Sbjct: 181 GIRVNALLPGGTDTPANFANL 201

>1xg5_A ARPG836; short chain dehydrogenase, human, SGC, structural genomics, structural genomics consortium, oxidoreductase; HET: NAP; 1.53A {Homo sapiens} SCOP: c.2.1.2 Length = 279

 Score =  165 bits (421), Expect = 1e-50
 Identities = 54/227 (23%), Positives = 97/227 (42%), Gaps = 14/227 (6%)

Query: 25  PPFLCYKFLLSVFNSIFS----EDVSGKVVIITGASSGIGEHLAYEYARRGACLALCARR 80
                       F    +    E    ++ ++TGAS GIG  +A    ++G  +  CAR 
Sbjct: 6   HHHHSSGRENLYFQGHMARPGMERWRDRLALVTGASGGIGAAVARALVQQGLKVVGCART 65

Query: 81  EKSLEEVADTAREIGSPD-VITIRADVSKVDDCRSLVEETMNHFGRLDHLVNNAGISSVA 139
             ++EE+A   +  G P  +I  R D+S  +D  S+     +    +D  +NNAG++   
Sbjct: 66  VGNIEELAAECKSAGYPGTLIPYRCDLSNEEDILSMFSAIRSQHSGVDICINNAGLARPD 125

Query: 140 LFEDIVNITDFKQIMNINFWGSVYTTRFAVPHLR---YTKGKIVVLSSAASWLTAPR--M 194
                 + + +K + N+N       TR A   ++      G I+ ++S +     P    
Sbjct: 126 TLLSG-STSGWKDMFNVNVLALSICTREAYQSMKERNVDDGHIININSMSGHRVLPLSVT 184

Query: 195 SFYNASKAALVLFFETLRVEL---GSDVGVTIVTPGFIESELTQGKF 238
            FY+A+K A+    E LR EL    + +  T ++PG +E++      
Sbjct: 185 HFYSATKYAVTALTEGLRQELREAQTHIRATCISPGVVETQFAFKLH 231

>3gvc_A Oxidoreductase, probable short-chain type dehydrogenase/reductase; ssgcid, decode, niaid, UWPPG, SBRI, structural genomics; 2.45A {Mycobacterium tuberculosis} Length = 277

 Score =  165 bits (420), Expect = 1e-50
 Identities = 58/196 (29%), Positives = 90/196 (45%), Gaps = 9/196 (4%)

Query: 44  DVSGKVVIITGASSGIGEHLAYEYARRGACLALCARREKSLEEVADTAREIGSPDVITIR 103
           D++GKV I+TGA +GIG  +A   A  G  +        + +  A    +IG       R
Sbjct: 26  DLAGKVAIVTGAGAGIGLAVARRLADEGCHVLCADIDGDAADAAAT---KIG-CGAAACR 81

Query: 104 ADVSKVDDCRSLVEETMNHFGRLDHLVNNAGISSVALFEDIVNITDFKQIMNINFWGSVY 163
            DVS      ++V+  +  FG +D LV NAG+  +A   D   + DF +++ IN  G+  
Sbjct: 82  VDVSDEQQIIAMVDACVAAFGGVDKLVANAGVVHLASLID-TTVEDFDRVIAINLRGAWL 140

Query: 164 TTRFAVPHLRYTK-GKIVVLSSAASWLTAPRMSFYNASKAALVLFFETLRVELGSDVGVT 222
            T+ A P +     G IV LSS A  +       Y  SKA ++        EL S  G+ 
Sbjct: 141 CTKHAAPRMIERGGGAIVNLSSLAGQVAVGGTGAYGMSKAGIIQLSRITAAELRSS-GIR 199

Query: 223 I--VTPGFIESELTQG 236
              + P F+++ + Q 
Sbjct: 200 SNTLLPAFVDTPMQQT 215

>3gaf_A 7-alpha-hydroxysteroid dehydrogenase; seattle structural genomics center for infectious disease, ssgcid, oxidoreductase, structural genomics; 2.20A {Brucella melitensis} Length = 256

 Score =  164 bits (418), Expect = 2e-50
 Identities = 52/196 (26%), Positives = 100/196 (51%), Gaps = 7/196 (3%)

Query: 44  DVSGKVVIITGASSGIGEHLAYEYARRGACLALCARREKSLEEVADTAREIGSPDVITIR 103
            ++  V I+TGA++GIG  +A  +A+ GA + +   + +  E VA   R+ G    I + 
Sbjct: 9   HLNDAVAIVTGAAAGIGRAIAGTFAKAGASVVVTDLKSEGAEAVAAAIRQAGG-KAIGLE 67

Query: 104 ADVSKVDDCRSLVEETMNHFGRLDHLVNNAGISSVALFEDIVNITDFKQIMNINFWGSVY 163
            +V+      ++++  ++ FG++  LVNNAG      F+  + ++DF+    +N +    
Sbjct: 68  CNVTDEQHREAVIKAALDQFGKITVLVNNAGGGGPKPFD--MPMSDFEWAFKLNLFSLFR 125

Query: 164 TTRFAVPH-LRYTKGKIVVLSSAASWLTAPRMSFYNASKAALVLFFETLRVELGSDVGVT 222
            ++ A PH  +   G I+ +SS A   T  RM+ Y +SKAA+      +  ++G   G+ 
Sbjct: 126 LSQLAAPHMQKAGGGAILNISSMAGENTNVRMASYGSSKAAVNHLTRNIAFDVGPM-GIR 184

Query: 223 I--VTPGFIESELTQG 236
           +  + PG I+++    
Sbjct: 185 VNAIAPGAIKTDALAT 200

>2ae2_A Protein (tropinone reductase-II); oxidoreductase, tropane alkaloid biosynthesis, reduction of tropinone to pseudotropine; HET: NAP PTO; 1.90A {Datura stramonium} SCOP: c.2.1.2 PDB: 2ae1_A* 1ipe_A* 1ipf_A* Length = 260

 Score =  164 bits (419), Expect = 2e-50
 Identities = 61/196 (31%), Positives = 96/196 (48%), Gaps = 7/196 (3%)

Query: 44  DVSGKVVIITGASSGIGEHLAYEYARRGACLALCARREKSLEEVADTAREIGSPDVITIR 103
           ++ G   ++TG S GIG  +  E A  GA +  C+R +K L +     R  G   V    
Sbjct: 6   NLEGCTALVTGGSRGIGYGIVEELASLGASVYTCSRNQKELNDCLTQWRSKGF-KVEASV 64

Query: 104 ADVSKVDDCRSLVEETMNHF-GRLDHLVNNAGISSVALFEDIVNITDFKQIMNINFWGSV 162
            D+S   + + L+    NHF G+L+ LVNNAGI      +D   + D+  IM+INF  + 
Sbjct: 65  CDLSSRSERQELMNTVANHFHGKLNILVNNAGIVIYKEAKD-YTVEDYSLIMSINFEAAY 123

Query: 163 YTTRFAVPHLRYTK-GKIVVLSSAASWLTAPRMSFYNASKAALVLFFETLRVELGSDVGV 221
           + +  A P L+ ++ G +V +SS +  L  P  + Y A+K A+      L  E   D  +
Sbjct: 124 HLSVLAHPFLKASERGNVVFISSVSGALAVPYEAVYGATKGAMDQLTRCLAFEWAKD-NI 182

Query: 222 TI--VTPGFIESELTQ 235
            +  V PG I + L +
Sbjct: 183 RVNGVGPGVIATSLVE 198

>1sby_A Alcohol dehydrogenase; ternary complex, NAD, trifluoroethanol, oxidoreductase; HET: NAD; 1.10A {Scaptodrosophila lebanonensis} SCOP: c.2.1.2 PDB: 1b14_A* 1b15_A* 1a4u_A* 1b2l_A* 1b16_A* 3rj5_A* 3rj9_A* 1mg5_A* Length = 254

 Score =  164 bits (417), Expect = 3e-50
 Identities = 46/198 (23%), Positives = 81/198 (40%), Gaps = 15/198 (7%)

Query: 44  DVSGKVVIITGASSGIGEHLAYEYARRGACLALCARREKSLEEVADTAREIGSPDVITIR 103
           D++ K VI   A  GIG   + E  +R     +   R ++   +A+        ++    
Sbjct: 2   DLTNKNVIFVAALGGIGLDTSRELVKRNLKNFVILDRVENPTALAELKAINPKVNITFHT 61

Query: 104 ADVS-KVDDCRSLVEETMNHFGRLDHLVNNAGISSVALFEDIVNITDFKQIMNINFWGSV 162
            DV+  V + + L+++  +    +D L+N AG         I++    ++ + INF G V
Sbjct: 62  YDVTVPVAESKKLLKKIFDQLKTVDILINGAG---------ILDDHQIERTIAINFTGLV 112

Query: 163 YTTRFAVPHLRYTK----GKIVVLSSAASWLTAPRMSFYNASKAALVLFFETLRVELGSD 218
            TT   +      K    G I  + S   +    ++  Y+ASKAA+V F  +L       
Sbjct: 113 NTTTAILDFWDKRKGGPGGIIANICSVTGFNAIHQVPVYSASKAAVVSFTNSLAKLAPIT 172

Query: 219 -VGVTIVTPGFIESELTQ 235
            V    + PG   + L  
Sbjct: 173 GVTAYSINPGITRTPLVH 190

>3r1i_A Short-chain type dehydrogenase/reductase; structural genomics, seattle structural genomics center for infectious disease, ssgcid; 1.95A {Mycobacterium marinum} Length = 276

 Score =  164 bits (418), Expect = 3e-50
 Identities = 66/198 (33%), Positives = 108/198 (54%), Gaps = 9/198 (4%)

Query: 44  DVSGKVVIITGASSGIGEHLAYEYARRGACLALCARREKSLEEVADTAREIGSPDVITIR 103
           D+SGK  +ITGAS+GIG+ +A  YA  GA +A+ AR   +L+ VAD    +G    + IR
Sbjct: 29  DLSGKRALITGASTGIGKKVALAYAEAGAQVAVAARHSDALQVVADEIAGVGG-KALPIR 87

Query: 104 ADVSKVDDCRSLVEETMNHFGRLDHLVNNAGISSVALFEDIVNITDFKQIMNINFWGSVY 163
            DV++ D  R ++++     G +D  V NAGI SV    D + + +F++I + N  G   
Sbjct: 88  CDVTQPDQVRGMLDQMTGELGGIDIAVCNAGIVSVQAMLD-MPLEEFQRIQDTNVTGVFL 146

Query: 164 TTRFAVPHL--RYTKGKIVVLSSAASWLT--APRMSFYNASKAALVLFFETLRVELGSDV 219
           T + A   +  +   G I+  +S +  +     ++S Y  SKAA+V   + + VEL    
Sbjct: 147 TAQAAARAMVDQGLGGTIITTASMSGHIINIPQQVSHYCTSKAAVVHLTKAMAVELAPH- 205

Query: 220 GVTI--VTPGFIESELTQ 235
            + +  V+PG+I +EL +
Sbjct: 206 QIRVNSVSPGYIRTELVE 223

>1iy8_A Levodione reductase; oxidoreductase; HET: NAD; 1.60A {Leifsonia aquatica} SCOP: c.2.1.2 Length = 267

 Score =  164 bits (417), Expect = 3e-50
 Identities = 57/213 (26%), Positives = 87/213 (40%), Gaps = 9/213 (4%)

Query: 42  SEDVSGKVVIITGASSGIGEHLAYEYARRGACLALCARREKSLEEVADTAREIGSP-DVI 100
           +   + +VV+ITG  SG+G   A   A  GA L+L     + LE       E     +V+
Sbjct: 8   TTRFTDRVVLITGGGSGLGRATAVRLAAEGAKLSLVDVSSEGLEASKAAVLETAPDAEVL 67

Query: 101 TIRADVSKVDDCRSLVEETMNHFGRLDHLVNNAGISSVALFEDIVNIT--DFKQIMNINF 158
           T  ADVS      + V  T   FGR+D   NNAGI          + T  +F ++++IN 
Sbjct: 68  TTVADVSDEAQVEAYVTATTERFGRIDGFFNNAGIEGK--QNPTESFTAAEFDKVVSINL 125

Query: 159 WGSVYTTRFAVPHLRYTK-GKIVVLSSAASWLTAPRMSFYNASKAALVLFFETLRVELGS 217
            G        +  +R    G +V  +S          S Y A+K  +V       VE G 
Sbjct: 126 RGVFLGLEKVLKIMREQGSGMVVNTASVGGIRGIGNQSGYAAAKHGVVGLTRNSAVEYGR 185

Query: 218 DVGVTI--VTPGFIESELTQGKFLTGRRQNSDR 248
             G+ I  + PG I + + +        +N  +
Sbjct: 186 Y-GIRINAIAPGAIWTPMVENSMKQLDPENPRK 217

>3tzq_B Short-chain type dehydrogenase/reductase; ssgcid, structural genomics, seattle structural genomics CEN infectious disease, oxidoreductase; 2.50A {Mycobacterium marinum} Length = 271

 Score =  163 bits (416), Expect = 5e-50
 Identities = 54/198 (27%), Positives = 90/198 (45%), Gaps = 11/198 (5%)

Query: 44  DVSGKVVIITGASSGIGEHLAYEYARRGACLALCARREKSLEEVADTAREIGSPDVITIR 103
           ++  KV IITGA  GIG   +   AR GA + L    E    ++A  A  +G    +   
Sbjct: 8   ELENKVAIITGACGGIGLETSRVLARAGARVVLADLPE---TDLAGAAASVGR-GAVHHV 63

Query: 104 ADVSKVDDCRSLVEETMNHFGRLDHLVNNAGISSVALFEDIVNIT--DFKQIMNINFWGS 161
            D++     R+L++ T++ FGRLD + NNA  S  A    +  +T   +     +N  G+
Sbjct: 64  VDLTNEVSVRALIDFTIDTFGRLDIVDNNAAHSDPA-DMLVTQMTVDVWDDTFTVNARGT 122

Query: 162 VYTTRFAVPHLRYTK-GKIVVLSSAASWLTAPRMSFYNASKAALVLFFETLRVELGSDVG 220
           +   ++A+P L     G IV +SSA +       + Y  +KAA+      +  + G   G
Sbjct: 123 MLMCKYAIPRLISAGGGAIVNISSATAHAAYDMSTAYACTKAAIETLTRYVATQYGRH-G 181

Query: 221 VTI--VTPGFIESELTQG 236
           V    + PG + +   + 
Sbjct: 182 VRCNAIAPGLVRTPRLEV 199

>3o38_A Short chain dehydrogenase; tuberculosis, ortholog from A non-pathogenic dehydrogenase, structural genomics; 1.95A {Mycobacterium smegmatis} Length = 266

 Score =  163 bits (415), Expect = 6e-50
 Identities = 54/196 (27%), Positives = 89/196 (45%), Gaps = 7/196 (3%)

Query: 46  SGKVVIITGAS-SGIGEHLAYEYARRGACLALCARREKSLEEVADTAREIGSPDVITIRA 104
            GKVV++T A+ +GIG   A      GA + +    E+ L E  D   ++G   V  +  
Sbjct: 21  KGKVVLVTAAAGTGIGSTTARRALLEGADVVISDYHERRLGETRDQLADLGLGRVEAVVC 80

Query: 105 DVSKVDDCRSLVEETMNHFGRLDHLVNNAGISSVALFEDIVNITDFKQIMNINFWGSVYT 164
           DV+  +   +L+ +T+   GRLD LVNNAG+       D+    ++ +++N+     +  
Sbjct: 81  DVTSTEAVDALITQTVEKAGRLDVLVNNAGLGGQTPVVDM-TDEEWDRVLNVTLTSVMRA 139

Query: 165 TRFAVPHLRYTK--GKIVVLSSAASWLTAPRMSFYNASKAALVLFFETLRVELGSDVGVT 222
           TR A+ + R     G IV  +S   W      S Y A+KA ++       +E     GV 
Sbjct: 140 TRAALRYFRGVDHGGVIVNNASVLGWRAQHSQSHYAAAKAGVMALTRCSAIEAVEF-GVR 198

Query: 223 I--VTPGFIESELTQG 236
           I  V+P     +  + 
Sbjct: 199 INAVSPSIARHKFLEK 214

>3i1j_A Oxidoreductase, short chain dehydrogenase/reducta; dimer, MIXE beta, structural genomics, PSI-2; 1.90A {Pseudomonas syringae PV} Length = 247

 Score =  162 bits (412), Expect = 1e-49
 Identities = 59/199 (29%), Positives = 89/199 (44%), Gaps = 7/199 (3%)

Query: 46  SGKVVIITGASSGIGEHLAYEYARRGACLALCARREKSLEEVADTAREIGS--PDVITIR 103
            G+V+++TGA+ GIG   A  YA  GA + L  R E SL EV+D  +  G   P +I + 
Sbjct: 13  KGRVILVTGAARGIGAAAARAYAAHGASVVLLGRTEASLAEVSDQIKSAGQPQPLIIALN 72

Query: 104 ADVSKVDDCRSLVEETMNHFGRLDHLVNNAGIS-SVALFEDIVNITDFKQIMNINFWGSV 162
            + +     R L     + FGRLD L++NA I       E +    DF Q+M++N   + 
Sbjct: 73  LENATAQQYRELAARVEHEFGRLDGLLHNASIIGPRTPLEQL-PDEDFMQVMHVNVNATF 131

Query: 163 YTTRFAVPHLRYTK-GKIVVLSSAASWLTAPRMSFYNASKAALVLFFETLRVELGSDVGV 221
             TR  +P L+ ++   I   SS+           Y  SK A     +TL  EL     V
Sbjct: 132 MLTRALLPLLKRSEDASIAFTSSSVGRKGRANWGAYGVSKFATEGLMQTLADELEGVTAV 191

Query: 222 TI--VTPGFIESELTQGKF 238
               + PG   + +    +
Sbjct: 192 RANSINPGATRTGMRAQAY 210

>3awd_A GOX2181, putative polyol dehydrogenase; oxidoreductase; 1.80A {Gluconobacter oxydans} Length = 260

 Score =  162 bits (413), Expect = 1e-49
 Identities = 51/199 (25%), Positives = 86/199 (43%), Gaps = 9/199 (4%)

Query: 44  DVSGKVVIITGASSGIGEHLAYEYARRGACLALCARREKSLEEVADTAREIGSPDVITIR 103
            +  +V I+TG +  IG       A  GA + +    E    +  +  R  G  DV ++ 
Sbjct: 10  RLDNRVAIVTGGAQNIGLACVTALAEAGARVIIADLDEAMATKAVEDLRMEGH-DVSSVV 68

Query: 104 ADVSKVDDCRSLVEETMNHFGRLDHLVNNAGIS-SVALFEDIVNITDFKQIMNINFWGSV 162
            DV+  +  ++ V       GR+D LV  AGI  S    ED +    + + ++IN  G  
Sbjct: 69  MDVTNTESVQNAVRSVHEQEGRVDILVACAGICISEVKAED-MTDGQWLKQVDINLNGMF 127

Query: 163 YTTRFAVPH-LRYTKGKIVVLSSAASWL--TAPRMSFYNASKAALVLFFETLRVELGSDV 219
            + +      L   +G IV + S +  +     + + YNASKA +  +  +L  E     
Sbjct: 128 RSCQAVGRIMLEQKQGVIVAIGSMSGLIVNRPQQQAAYNASKAGVHQYIRSLAAEWAPH- 186

Query: 220 GVTI--VTPGFIESELTQG 236
           G+    V P +IE+ LT+ 
Sbjct: 187 GIRANAVAPTYIETTLTRF 205

>3p19_A BFPVVD8, putative blue fluorescent protein; rossmann-fold, oxidoreductase; HET: NAP; 2.05A {Vibrio vulnificus} Length = 266

 Score =  162 bits (412), Expect = 2e-49
 Identities = 51/195 (26%), Positives = 94/195 (48%), Gaps = 10/195 (5%)

Query: 42  SEDVSGKVVIITGASSGIGEHLAYEYARRGACLALCARREKSLEEVADTAREIGSPDVIT 101
                 K+V+ITGASSGIGE +A  ++  G  L L ARR + L+ +         P+ + 
Sbjct: 11  GRGSMKKLVVITGASSGIGEAIARRFSEEGHPLLLLARRVERLKALNL-------PNTLC 63

Query: 102 IRADVSKVDDCRSLVEETMNHFGRLDHLVNNAGISSVALFEDIVNITDFKQIMNINFWGS 161
            + DV+      + +      +G  D +VNNAG+  +   +      +++++ ++N  G 
Sbjct: 64  AQVDVTDKYTFDTAITRAEKIYGPADAIVNNAGMMLLGQIDTQ-EANEWQRMFDVNVLGL 122

Query: 162 VYTTRFAVPHLRYTK-GKIVVLSSAASWLTAPRMSFYNASKAALVLFFETLRVEL-GSDV 219
           +   +  +  ++    G I+ +SS A   T P  + Y  +K A+    E +R E+  S+V
Sbjct: 123 LNGMQAVLAPMKARNCGTIINISSIAGKKTFPDHAAYCGTKFAVHAISENVREEVAASNV 182

Query: 220 GVTIVTPGFIESELT 234
            V  + P  +++EL 
Sbjct: 183 RVMTIAPSAVKTELL 197

>3ctm_A Carbonyl reductase; alcohol dehydrogenase, short-chain dehydrogenases/reductases (SDR), X-RAY crystallography, oxidoreductase; 2.69A {Candida parapsilosis} Length = 279

 Score =  162 bits (412), Expect = 3e-49
 Identities = 47/197 (23%), Positives = 94/197 (47%), Gaps = 5/197 (2%)

Query: 44  DVSGKVVIITGASSGIGEHLAYEYARRGACLALCARREKSLEEVADTAREIGSPDVITIR 103
            + GKV  +TG+S GIG  +A  YA+ GA +A+      + E+     +  G       +
Sbjct: 31  SLKGKVASVTGSSGGIGWAVAEAYAQAGADVAIWYNSHPADEKAEHLQKTYGV-HSKAYK 89

Query: 104 ADVSKVDDCRSLVEETMNHFGRLDHLVNNAGIS-SVALFEDIVNITDFKQIMNINFWGSV 162
            ++S        + +    FG +D  V NAG++ +     D+ N   + +I++++  G  
Sbjct: 90  CNISDPKSVEETISQQEKDFGTIDVFVANAGVTWTQGPEIDVDNYDSWNKIISVDLNGVY 149

Query: 163 YTTRFAVPH-LRYTKGKIVVLSSAASWL-TAPRM-SFYNASKAALVLFFETLRVELGSDV 219
           Y +        +  KG +++ SS +  +   P++ + YN +KAA     ++L +E     
Sbjct: 150 YCSHNIGKIFKKNGKGSLIITSSISGKIVNIPQLQAPYNTAKAACTHLAKSLAIEWAPFA 209

Query: 220 GVTIVTPGFIESELTQG 236
            V  ++PG+I++++T  
Sbjct: 210 RVNTISPGYIDTDITDF 226

>2d1y_A Hypothetical protein TT0321; strucrtural genomics, thermus thermophilus HB8, structural genomics, NPPSFA; HET: NAD; 1.65A {Thermus thermophilus} SCOP: c.2.1.2 Length = 256

 Score =  161 bits (410), Expect = 3e-49
 Identities = 55/193 (28%), Positives = 91/193 (47%), Gaps = 12/193 (6%)

Query: 46  SGKVVIITGASSGIGEHLAYEYARRGACLALCARREKSLEEVADTAREIGSPDVITIRAD 105
           +GK V++TG + GIG  +A  +AR GA +ALC  R     E  + A  IG       + D
Sbjct: 5   AGKGVLVTGGARGIGRAIAQAFAREGALVALCDLRP----EGKEVAEAIGG---AFFQVD 57

Query: 106 VSKVDDCRSLVEETMNHFGRLDHLVNNAGISSVALFEDIVNITDFKQIMNINFWGSVYTT 165
           +    +    VEE     GR+D LVNNA I++      +  + ++++++ +N    ++ +
Sbjct: 58  LEDERERVRFVEEAAYALGRVDVLVNNAAIAAPGSALTV-RLPEWRRVLEVNLTAPMHLS 116

Query: 166 RFAVPHLRYTK-GKIVVLSSAASWLTAPRMSFYNASKAALVLFFETLRVELGSDVGVTI- 223
             A   +R    G IV ++S          + YNASK  LV    +L ++L     + + 
Sbjct: 117 ALAAREMRKVGGGAIVNVASVQGLFAEQENAAYNASKGGLVNLTRSLALDLAPL-RIRVN 175

Query: 224 -VTPGFIESELTQ 235
            V PG I +E   
Sbjct: 176 AVAPGAIATEAVL 188

>3ksu_A 3-oxoacyl-acyl carrier protein reductase; structural genomics, PSI-2, dehydrogenase, protein structure initiative; 2.30A {Oenococcus oeni psu-1} Length = 262

 Score =  161 bits (410), Expect = 3e-49
 Identities = 39/197 (19%), Positives = 80/197 (40%), Gaps = 7/197 (3%)

Query: 44  DVSGKVVIITGASSGIGEHLAYEYARRGACLAL---CARREKSLEEVADTAREIGSPDVI 100
           D+  KV++I G    +G   A  +A     L L    A+   +  ++ D   + G+  V 
Sbjct: 8   DLKNKVIVIAGGIKNLGALTAKTFALESVNLVLHYHQAKDSDTANKLKDELEDQGA-KVA 66

Query: 101 TIRADVSKVDDCRSLVEETMNHFGRLDHLVNNAGISSVALFEDIVNITDFKQIMNINFWG 160
             ++D+S  ++   L +     FG++D  +N  G        +  +  +F  +  IN   
Sbjct: 67  LYQSDLSNEEEVAKLFDFAEKEFGKVDIAINTVGKVLKKPIVET-SEAEFDAMDTINNKV 125

Query: 161 SVYTTRFAVPHLRYTKGKIVVLSSAASWLTAPRMSFYNASKAALVLFFETLRVELGS-DV 219
           + +  + A  H+    G I+ ++++         S Y  +KA +  +      EL    +
Sbjct: 126 AYFFIKQAAKHMN-PNGHIITIATSLLAAYTGFYSTYAGNKAPVEHYTRAASKELMKQQI 184

Query: 220 GVTIVTPGFIESELTQG 236
            V  + PG +++    G
Sbjct: 185 SVNAIAPGPMDTSFFYG 201

>4e4y_A Short chain dehydrogenase family protein; structural genomics, the center for structural genomics of I diseases, csgid, niaid; 1.80A {Francisella tularensis subsp} Length = 244

 Score =  160 bits (408), Expect = 4e-49
 Identities = 39/193 (20%), Positives = 83/193 (43%), Gaps = 17/193 (8%)

Query: 46  SGKVVIITGASSGIGEHLAYEYARRGACLALCARREKSLEEVADTAREIGSPDVITIRAD 105
           +    ++TG S GIG+ +     +      +    ++             + ++  I+AD
Sbjct: 3   AMANYLVTGGSKGIGKAVVELLLQNKNHTVINIDIQQ----------SFSAENLKFIKAD 52

Query: 106 VSKVDDCRSLVEETMNHFGRLDHLVNNAGISSVALFEDIVNITDFKQIMNINFWGSVYTT 165
           ++K  D  ++++         D +  NAGI       DI +I   K+++++N W S+Y  
Sbjct: 53  LTKQQDITNVLDII--KNVSFDGIFLNAGILIKGSIFDI-DIESIKKVLDLNVWSSIYFI 109

Query: 166 RFAVPHLRYTKGKIVVLSSAASWLTAPRMSFYNASKAALVLFFETLRVELGSDVGVTI-- 223
           +    +L+     IV   S   ++  P    Y  SK A+    ++L ++L     + +  
Sbjct: 110 KGLENNLK-VGASIVFNGSDQCFIAKPNSFAYTLSKGAIAQMTKSLALDLAKY-QIRVNT 167

Query: 224 VTPGFIESELTQG 236
           V PG ++++L + 
Sbjct: 168 VCPGTVDTDLYRN 180

>3oid_A Enoyl-[acyl-carrier-protein] reductase [NADPH]; fatty acid synthesis, enoyl-ACP reductases, FABL, rossmann-L NADPH binding, oxidoreductase; HET: TCL NDP; 1.80A {Bacillus subtilis} PDB: 3oic_A* Length = 258

 Score =  161 bits (409), Expect = 5e-49
 Identities = 51/193 (26%), Positives = 89/193 (46%), Gaps = 7/193 (3%)

Query: 47  GKVVIITGASSGIGEHLAYEYARRGACLAL-CARREKSLEEVADTAREIGSPDVITIRAD 105
            K  ++TG+S G+G+  A   A  G  + +  AR +K+  E A+   ++G   V+ ++A+
Sbjct: 4   NKCALVTGSSRGVGKAAAIRLAENGYNIVINYARSKKAALETAEEIEKLGV-KVLVVKAN 62

Query: 106 VSKVDDCRSLVEETMNHFGRLDHLVNNAGISSVALFEDIVNITDFKQIMNINFWGSVYTT 165
           V +    + + ++    FGRLD  VNNA    +    ++   T +   MNIN    ++  
Sbjct: 63  VGQPAKIKEMFQQIDETFGRLDVFVNNAASGVLRPVMEL-EETHWDWTMNINAKALLFCA 121

Query: 166 RFAVPHLRYTK-GKIVVLSSAASWLTAPRMSFYNASKAALVLFFETLRVELGSDVGVTI- 223
           + A   +     G IV +SS  S       +    SKAAL      L VEL     + + 
Sbjct: 122 QEAAKLMEKNGGGHIVSISSLGSIRYLENYTTVGVSKAALEALTRYLAVELSPK-QIIVN 180

Query: 224 -VTPGFIESELTQ 235
            V+ G I+++  +
Sbjct: 181 AVSGGAIDTDALK 193

>1geg_A Acetoin reductase; SDR family, oxidoreductase; HET: GLC NAD; 1.70A {Klebsiella pneumoniae} SCOP: c.2.1.2 Length = 256

 Score =  160 bits (408), Expect = 5e-49
 Identities = 51/193 (26%), Positives = 90/193 (46%), Gaps = 7/193 (3%)

Query: 48  KVVIITGASSGIGEHLAYEYARRGACLALCARREKSLEEVADTAREIGSPDVITIRADVS 107
           KV ++TGA  GIG+ +A    + G  +A+    + + + VA    + G    + ++ DVS
Sbjct: 3   KVALVTGAGQGIGKAIALRLVKDGFAVAIADYNDATAKAVASEINQAG-GHAVAVKVDVS 61

Query: 108 KVDDCRSLVEETMNHFGRLDHLVNNAGISSVALFEDIVNITDFKQIMNINFWGSVYTTRF 167
             D   + VE+     G  D +VNNAG++     E I       ++ NIN  G ++  + 
Sbjct: 62  DRDQVFAAVEQARKTLGGFDVIVNNAGVAPSTPIESI-TPEIVDKVYNINVKGVIWGIQA 120

Query: 168 AVPHL--RYTKGKIVVLSSAASWLTAPRMSFYNASKAALVLFFETLRVELGSDVGVTI-- 223
           AV         GKI+   S A  +  P ++ Y++SK A+    +T   +L    G+T+  
Sbjct: 121 AVEAFKKEGHGGKIINACSQAGHVGNPELAVYSSSKFAVRGLTQTAARDLAPL-GITVNG 179

Query: 224 VTPGFIESELTQG 236
             PG +++ +   
Sbjct: 180 YCPGIVKTPMWAE 192

>3qiv_A Short-chain dehydrogenase or 3-oxoacyl-[acyl-CARR protein] reductase; structural genomics; 2.25A {Mycobacterium avium subsp} Length = 253

 Score =  160 bits (408), Expect = 5e-49
 Identities = 57/197 (28%), Positives = 96/197 (48%), Gaps = 10/197 (5%)

Query: 46  SGKVVIITGASSGIGEHLAYEYARRGACLALCARREKSLEEVADTAREIGSPDVITIRAD 105
             KV I+TG+  GIG+  A   AR GA + +     ++ E VA      G    I++  D
Sbjct: 8   ENKVGIVTGSGGGIGQAYAEALAREGAAVVVADINAEAAEAVAKQIVADGG-TAISVAVD 66

Query: 106 VSKVDDCRSLVEETMNHFGRLDHLVNNAGISSVALFEDIVNIT--DFKQIMNINFWGSVY 163
           VS  +  +++ + T+  FG +D+LVNNA I      + ++ I    +K+ M++N  G+++
Sbjct: 67  VSDPESAKAMADRTLAEFGGIDYLVNNAAIFGGMKLDFLLTIDPEYYKKFMSVNLDGALW 126

Query: 164 TTRFAVPHLRYTK-GKIVVLSSAASWLTAPRMSFYNASKAALVLFFETLRVELGSDVGVT 222
            TR     +     G IV  SS A+WL +    +Y  +K  +    + L  ELG    + 
Sbjct: 127 CTRAVYKKMTKRGGGAIVNQSSTAAWLYSN---YYGLAKVGINGLTQQLSRELGGR-NIR 182

Query: 223 I--VTPGFIESELTQGK 237
           I  + PG I++E  +  
Sbjct: 183 INAIAPGPIDTEANRTT 199

>3m1a_A Putative dehydrogenase; short, PSI, MCSG, structural genomics, midwest center for structural genomics, protein structure initiative; 2.00A {Streptomyces avermitilis} Length = 281

 Score =  161 bits (409), Expect = 7e-49
 Identities = 56/186 (30%), Positives = 90/186 (48%), Gaps = 7/186 (3%)

Query: 46  SGKVVIITGASSGIGEHLAYEYARRGACLALCARREKSLEEVADTAREIGSPDVITIRAD 105
           S KV ++TGASSG G  +A      G  +   ARR ++L+++     +        I  D
Sbjct: 4   SAKVWLVTGASSGFGRAIAEAAVAAGDTVIGTARRTEALDDLVAAYPD----RAEAISLD 59

Query: 106 VSKVDDCRSLVEETMNHFGRLDHLVNNAGISSVALFEDIVNITDFKQIMNINFWGSVYTT 165
           V+  +    +  + +  +GR+D LVNNAG + V  FE+     + + +  ++ +G    T
Sbjct: 60  VTDGERIDVVAADVLARYGRVDVLVNNAGRTQVGAFEE-TTERELRDLFELHVFGPARLT 118

Query: 166 RFAVPHLRYTK-GKIVVLSSAASWLTAPRMSFYNASKAALVLFFETLRVELGS-DVGVTI 223
           R  +P +R    G +V +SS    L+    S Y+A+KAAL    E L  E+    + V I
Sbjct: 119 RALLPQMRERGSGSVVNISSFGGQLSFAGFSAYSATKAALEQLSEGLADEVAPFGIKVLI 178

Query: 224 VTPGFI 229
           V PG  
Sbjct: 179 VEPGAF 184

>1oaa_A Sepiapterin reductase; tetrahydrobiopterin, oxidoreductase; HET: NAP; 1.25A {Mus musculus} SCOP: c.2.1.2 PDB: 1nas_A* 1sep_A* 1z6z_A* Length = 259

 Score =  160 bits (407), Expect = 9e-49
 Identities = 41/207 (19%), Positives = 77/207 (37%), Gaps = 14/207 (6%)

Query: 42  SEDVSGKVVIITGASSGIGEHLAYEYAR---RGACLALCARREKSLEEVADTAREIGSP- 97
           ++ +   V ++TGAS G G  LA + AR    G+ + + AR E  L ++ +         
Sbjct: 1   ADGLGCAVCVLTGASRGFGRALAPQLARLLSPGSVMLVSARSESMLRQLKEELGAQQPDL 60

Query: 98  DVITIRADVSKVDDCRSLVEETMN----HFGRLDHLVNNAGISSVALFEDIVNIT--DFK 151
            V+   AD+      + L+            +   L+NNA          +      +  
Sbjct: 61  KVVLAAADLGTEAGVQRLLSAVRELPRPEGLQRLLLINNAATLGDVSKGFLNVNDLAEVN 120

Query: 152 QIMNINFWGSVYTTRFAVPHLRYTK---GKIVVLSSAASWLTAPRMSFYNASKAALVLFF 208
               +N    +  T   +   + +      +V +SS  +         Y A KAA  + +
Sbjct: 121 NYWALNLTSMLCLTSGTLNAFQDSPGLSKTVVNISSLCALQPYKGWGLYCAGKAARDMLY 180

Query: 209 ETLRVELGSDVGVTIVTPGFIESELTQ 235
           + L  E    V V    PG +++++ Q
Sbjct: 181 QVLAAE-EPSVRVLSYAPGPLDNDMQQ 206

>3a28_C L-2.3-butanediol dehydrogenase; chiral substrate recognition, oxidoreductase; HET: NAD; 2.00A {Brevibacterium saccharolyticum} Length = 258

 Score =  160 bits (407), Expect = 9e-49
 Identities = 48/196 (24%), Positives = 87/196 (44%), Gaps = 9/196 (4%)

Query: 47  GKVVIITGASSGIGEHLAYEYARRGACLALC--ARREKSLEEVADTAREIGSPDVITIRA 104
            KV ++TG + GIG  ++ + A  G  +A+    ++E+   E             + +  
Sbjct: 2   SKVAMVTGGAQGIGRGISEKLAADGFDIAVADLPQQEEQAAETIKLIEAAD-QKAVFVGL 60

Query: 105 DVSKVDDCRSLVEETMNHFGRLDHLVNNAGISSVALFEDIVNITDFKQIMNINFWGSVYT 164
           DV+   +  S ++E     G  D LVNNAGI+ +    ++    D KQI ++N +   + 
Sbjct: 61  DVTDKANFDSAIDEAAEKLGGFDVLVNNAGIAQIKPLLEV-TEEDLKQIYSVNVFSVFFG 119

Query: 165 TRFAVPHL--RYTKGKIVVLSSAASWLTAPRMSFYNASKAALVLFFETLRVELGSDVGVT 222
            + A         KGKI+  +S A+    P +S Y+ +K A+    +    EL    G T
Sbjct: 120 IQAASRKFDELGVKGKIINAASIAAIQGFPILSAYSTTKFAVRGLTQAAAQELAPK-GHT 178

Query: 223 I--VTPGFIESELTQG 236
           +    PG + + + + 
Sbjct: 179 VNAYAPGIVGTGMWEQ 194

>3ak4_A NADH-dependent quinuclidinone reductase; SDR, (R)-3-quinuclidinol, chiral alcohol, oxidoreductase; HET: NAD; 2.00A {Agrobacterium tumefaciens} Length = 263

 Score =  160 bits (407), Expect = 9e-49
 Identities = 51/197 (25%), Positives = 95/197 (48%), Gaps = 10/197 (5%)

Query: 44  DVSGKVVIITGASSGIGEHLAYEYARRGACLALCARREKSLEEVADTAREIGSPDVITIR 103
           D+SG+  I+TG S GIG  +A    + GA +A+      + + V      + +     + 
Sbjct: 9   DLSGRKAIVTGGSKGIGAAIARALDKAGATVAIADLDVMAAQAVVA---GLEN-GGFAVE 64

Query: 104 ADVSKVDDCRSLVEETMNHFGRLDHLVNNAGISSVALFEDIVNITDFKQIMNINFWGSVY 163
            DV+K     + +++ ++  G  D L  NAG+S++    DI    ++    ++N  G   
Sbjct: 65  VDVTKRASVDAAMQKAIDALGGFDLLCANAGVSTMRPAVDI-TDEEWDFNFDVNARGVFL 123

Query: 164 TTRFAVPHL--RYTKGKIVVLSSAASWLTAPRMSFYNASKAALVLFFETLRVELGSDVGV 221
             + A  H     TKG IV  +S A+ + AP ++ Y+ASK A+  + + L  E+     +
Sbjct: 124 ANQIACRHFLASNTKGVIVNTASLAAKVGAPLLAHYSASKFAVFGWTQALAREMAPK-NI 182

Query: 222 TI--VTPGFIESELTQG 236
            +  V PGF+++ + + 
Sbjct: 183 RVNCVCPGFVKTAMQER 199

>3v2h_A D-beta-hydroxybutyrate dehydrogenase; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; 3.00A {Sinorhizobium meliloti} Length = 281

 Score =  160 bits (408), Expect = 1e-48
 Identities = 56/203 (27%), Positives = 105/203 (51%), Gaps = 6/203 (2%)

Query: 38  NSIFSEDVSGKVVIITGASSGIGEHLAYEYARRGACLALCARR-EKSLEEVADTAREIGS 96
            +++ + +  K  +ITG++SGIG  +A   A+ GA + L        +  V D    + S
Sbjct: 16  ENLYFQSMMTKTAVITGSTSGIGLAIARTLAKAGANIVLNGFGAPDEIRTVTDEVAGLSS 75

Query: 97  PDVITIRADVSKVDDCRSLVEETMNHFGRLDHLVNNAGISSVALFEDIVNITDFKQIMNI 156
             V+   AD++K  +   ++    + FG  D LVNNAG+  V   ED   +  + +I+ +
Sbjct: 76  GTVLHHPADMTKPSEIADMMAMVADRFGGADILVNNAGVQFVEKIEDF-PVEQWDRIIAV 134

Query: 157 NFWGSVYTTRFAVPHLRYTK-GKIVVLSSAASWLTAPRMSFYNASKAALVLFFETLRVEL 215
           N   S +T R A+P ++    G+I+ ++SA   + +P  S Y A+K  ++   +T+ +E+
Sbjct: 135 NLSSSFHTIRGAIPPMKKKGWGRIINIASAHGLVASPFKSAYVAAKHGIMGLTKTVALEV 194

Query: 216 GSDVGVTI--VTPGFIESELTQG 236
               GVT+  + PG++ + L + 
Sbjct: 195 AES-GVTVNSICPGYVLTPLVEK 216

>3vtz_A Glucose 1-dehydrogenase; rossmann fold, oxidoreductase, NAD binding; 2.30A {Thermoplasma volcanium} Length = 269

 Score =  160 bits (406), Expect = 1e-48
 Identities = 51/194 (26%), Positives = 90/194 (46%), Gaps = 13/194 (6%)

Query: 44  DVSGKVVIITGASSGIGEHLAYEYARRGACLALCARREKSLEEVADTAREIGSPDVITIR 103
           + + KV I+TG SSGIG  +     R GA +   +  EKS   V+D             +
Sbjct: 11  EFTDKVAIVTGGSSGIGLAVVDALVRYGAKVVSVSLDEKSDVNVSDH-----------FK 59

Query: 104 ADVSKVDDCRSLVEETMNHFGRLDHLVNNAGISSVALFEDIVNITDFKQIMNINFWGSVY 163
            DV+  ++ +  VE+T   +GR+D LVNNAGI   +          +++I+++N  GS  
Sbjct: 60  IDVTNEEEVKEAVEKTTKKYGRIDILVNNAGIEQYSPLHLT-PTEIWRRIIDVNVNGSYL 118

Query: 164 TTRFAVPHLRYT-KGKIVVLSSAASWLTAPRMSFYNASKAALVLFFETLRVELGSDVGVT 222
             ++ +P +     G I+ ++S  S+      + Y  SK AL+    ++ ++    +   
Sbjct: 119 MAKYTIPVMLAIGHGSIINIASVQSYAATKNAAAYVTSKHALLGLTRSVAIDYAPKIRCN 178

Query: 223 IVTPGFIESELTQG 236
            V PG I + +   
Sbjct: 179 AVCPGTIMTPMVIK 192

>1xq1_A Putative tropinone reducatse; structural genomics, protein structure initiative, CESG, AT1 reductively methylated protein; 2.10A {Arabidopsis thaliana} SCOP: c.2.1.2 PDB: 2q45_A Length = 266

 Score =  159 bits (406), Expect = 2e-48
 Identities = 58/196 (29%), Positives = 90/196 (45%), Gaps = 7/196 (3%)

Query: 44  DVSGKVVIITGASSGIGEHLAYEYARRGACLALCARREKSLEEVADTAREIGSPDVITIR 103
            +  K V++TG + GIG  +  E+A  GA +  CAR E  L E     ++ G   V    
Sbjct: 11  SLKAKTVLVTGGTKGIGHAIVEEFAGFGAVIHTCARNEYELNECLSKWQKKGF-QVTGSV 69

Query: 104 ADVSKVDDCRSLVEETMNHFG-RLDHLVNNAGISSVALFEDIVNITDFKQIMNINFWGSV 162
            D S   +   L++   + FG +LD L+NN G        D     DF   ++ N   + 
Sbjct: 70  CDASLRPEREKLMQTVSSMFGGKLDILINNLGAIRSKPTLD-YTAEDFSFHISTNLESAY 128

Query: 163 YTTRFAVPHLRYTK-GKIVVLSSAASWLTAPRMSFYNASKAALVLFFETLRVELGSDVGV 221
           + ++ A P L+ +  G I+ +SS A  ++A   S Y+A+K AL      L  E  SD G+
Sbjct: 129 HLSQLAHPLLKASGCGNIIFMSSIAGVVSASVGSIYSATKGALNQLARNLACEWASD-GI 187

Query: 222 TI--VTPGFIESELTQ 235
               V P  I + L +
Sbjct: 188 RANAVAPAVIATPLAE 203

>1hxh_A 3BETA/17BETA-hydroxysteroid dehydrogenase; alpha-beta, rossmann fold, short-chain dehydrogenase, oxidoreductase; 1.22A {Comamonas testosteroni} SCOP: c.2.1.2 Length = 253

 Score =  159 bits (404), Expect = 2e-48
 Identities = 53/204 (25%), Positives = 91/204 (44%), Gaps = 10/204 (4%)

Query: 45  VSGKVVIITGASSGIGEHLAYEYARRGACLALCARREKSLEEVADTAREIGSPDVITIRA 104
           + GKV ++TG +SG+G  +       GA +A     E + +++A    E+G    + +R 
Sbjct: 4   LQGKVALVTGGASGVGLEVVKLLLGEGAKVAFSDINEAAGQQLAA---ELG-ERSMFVRH 59

Query: 105 DVSKVDDCRSLVEETMNHFGRLDHLVNNAGISSVALFEDIVNITDFKQIMNINFWGSVYT 164
           DVS   D   ++       G L+ LVNNAGI      E    + DF +++ IN       
Sbjct: 60  DVSSEADWTLVMAAVQRRLGTLNVLVNNAGILLPGDMET-GRLEDFSRLLKINTESVFIG 118

Query: 165 TRFAVPHLRYTKGKIVVLSSAASWLTAPRMSFYNASKAALVLFFETLRVELGSDVGVTI- 223
            +  +  ++ T G I+ ++S +SWL   + + Y+ASKAA+        +      G  I 
Sbjct: 119 CQQGIAAMKETGGSIINMASVSSWLPIEQYAGYSASKAAVSALTRAAALSCRKQ-GYAIR 177

Query: 224 ---VTPGFIESELTQGKFLTGRRQ 244
              + P  I + + Q     G  +
Sbjct: 178 VNSIHPDGIYTPMMQASLPKGVSK 201

>3edm_A Short chain dehydrogenase; structural genomics, oxidoreductase, PSI-2, P structure initiative; 2.30A {Agrobacterium tumefaciens str} Length = 259

 Score =  159 bits (404), Expect = 3e-48
 Identities = 44/192 (22%), Positives = 83/192 (43%), Gaps = 6/192 (3%)

Query: 46  SGKVVIITGASSGIGEHLAYEYARRGACLALC-ARREKSLEEVADTAREIGSPDVITIRA 104
           + + +++ GA   IG   A  +A+ GA + L      +          ++G    + I+A
Sbjct: 7   TNRTIVVAGAGRDIGRACAIRFAQEGANVVLTYNGAAEGAATAVAEIEKLGR-SALAIKA 65

Query: 105 DVSKVDDCRSLVEETMNHFGRLDHLVNNAG-ISSVALFEDIVNITDFKQIMNINFWGSVY 163
           D++   +  + +    + FG +  LV+ AG + +     ++ +   + Q++++N      
Sbjct: 66  DLTNAAEVEAAISAAADKFGEIHGLVHVAGGLIARKTIAEM-DEAFWHQVLDVNLTSLFL 124

Query: 164 TTRFAVPHLRYTKGKIVVLSSAASWL-TAPRMSFYNASKAALVLFFETLRVELGSDVGVT 222
           T + A+P +    G IV  SS A      P    Y  SK A++ F   L  E+G  + V 
Sbjct: 125 TAKTALPKMA-KGGAIVTFSSQAGRDGGGPGALAYATSKGAVMTFTRGLAKEVGPKIRVN 183

Query: 223 IVTPGFIESELT 234
            V PG I +   
Sbjct: 184 AVCPGMISTTFH 195

>2ew8_A (S)-1-phenylethanol dehydrogenase; transferase; 2.10A {Azoarcus SP} SCOP: c.2.1.2 PDB: 2ewm_A* Length = 249

 Score =  158 bits (403), Expect = 3e-48
 Identities = 58/197 (29%), Positives = 100/197 (50%), Gaps = 8/197 (4%)

Query: 42  SEDVSGKVVIITGASSGIGEHLAYEYARRGACLALCARREKSLEEVADTAREIGSPDVIT 101
           ++ +  K+ +ITG ++GIG  +A  +A  GA +A+         E     R +G   V+T
Sbjct: 2   TQRLKDKLAVITGGANGIGRAIAERFAVEGADIAIADLVPA--PEAEAAIRNLGR-RVLT 58

Query: 102 IRADVSKVDDCRSLVEETMNHFGRLDHLVNNAGISSVALFEDIVNITDFKQIMNINFWGS 161
           ++ DVS+  D  +  ++ ++ FGR D LVNNAGI  +  F+++     +K+   IN    
Sbjct: 59  VKCDVSQPGDVEAFGKQVISTFGRCDILVNNAGIYPLIPFDEL-TFEQWKKTFEINVDSG 117

Query: 162 VYTTRFAVPH-LRYTKGKIVVLSSAASWLTAPRMSFYNASKAALVLFFETLRVELGSDVG 220
               +  VP   R   G+I+ L+S   WL     + Y ++KAA + F   L  +LG D G
Sbjct: 118 FLMAKAFVPGMKRNGWGRIINLTSTTYWLKIEAYTHYISTKAANIGFTRALASDLGKD-G 176

Query: 221 VTI--VTPGFIESELTQ 235
           +T+  + P  + +  T+
Sbjct: 177 ITVNAIAPSLVRTATTE 193

>2b4q_A Rhamnolipids biosynthesis 3-oxoacyl-[acyl- carrier-protein] reductase; RHLG-NADP complex, oxidoreductase; HET: NAP; 2.30A {Pseudomonas aeruginosa} Length = 276

 Score =  159 bits (404), Expect = 3e-48
 Identities = 56/210 (26%), Positives = 94/210 (44%), Gaps = 14/210 (6%)

Query: 35  SVFNSIFSEDVSGKVVIITGASSGIGEHLAYEYARRGACLALCARREKSLEEVADTAREI 94
           S  +  F   ++G++ ++TG S GIG+ +A      GA + +CAR  ++  + A      
Sbjct: 19  SHMHPYF--SLAGRIALVTGGSRGIGQMIAQGLLEAGARVFICARDAEACADTATRLSAY 76

Query: 95  GSPDVITIRADVSKVDDCRSLVEETMNHFGRLDHLVNNAGISSVALFEDIVNITDFKQIM 154
           G  D   I AD+S     R L +       RLD LVNNAG S  A  E    ++ ++++M
Sbjct: 77  G--DCQAIPADLSSEAGARRLAQALGELSARLDILVNNAGTSWGAALES-YPVSGWEKVM 133

Query: 155 NINFWGSVYTTRFAVPHLRYT-----KGKIVVLSSAASWLTAPRMSF-YNASKAALVLFF 208
            +N        +  +P LR +       +++ + S A        ++ Y  SKAAL    
Sbjct: 134 QLNVTSVFSCIQQLLPLLRRSASAENPARVINIGSVAGISAMGEQAYAYGPSKAALHQLS 193

Query: 209 ETLRVELGSDVGVTI--VTPGFIESELTQG 236
             L  EL  +  + +  + PG   S +T+ 
Sbjct: 194 RMLAKELVGE-HINVNVIAPGRFPSRMTRH 222

>3gem_A Short chain dehydrogenase; structural genomics, APC65077, oxidoreductase, PSI-2, protein structure initiative; 1.83A {Pseudomonas syringae PV} Length = 260

 Score =  158 bits (403), Expect = 4e-48
 Identities = 34/194 (17%), Positives = 66/194 (34%), Gaps = 9/194 (4%)

Query: 44  DVSGKVVIITGASSGIGEHLAYEYARRGACLALCARREKSLEEVADTAREIGSPDVITIR 103
            +S   ++ITGAS  +G H A      G  + +  R E          R+ G    + + 
Sbjct: 24  TLSSAPILITGASQRVGLHCALRLLEHGHRVIISYRTE---HASVTELRQAG---AVALY 77

Query: 104 ADVSKVDDCRSLVEETMNHFGRLDHLVNNAGISSVALFEDIVNITDFKQIMNINFWGSVY 163
            D S      + ++        L  +V+NA         +     +F ++ +++      
Sbjct: 78  GDFSCETGIMAFIDLLKTQTSSLRAVVHNASEWLAETPGE--EADNFTRMFSVHMLAPYL 135

Query: 164 TTRFAVPHLRYTK-GKIVVLSSAASWLTAPRMSFYNASKAALVLFFETLRVELGSDVGVT 222
                 P L  ++   IV +S   +   + +   Y A+KA L     +        V V 
Sbjct: 136 INLHCEPLLTASEVADIVHISDDVTRKGSSKHIAYCATKAGLESLTLSFAARFAPLVKVN 195

Query: 223 IVTPGFIESELTQG 236
            + P  +  +    
Sbjct: 196 GIAPALLMFQPKDD 209

>2nwq_A Probable short-chain dehydrogenase; oxidoreductase; 2.30A {Pseudomonas aeruginosa} Length = 272

 Score =  158 bits (402), Expect = 6e-48
 Identities = 61/201 (30%), Positives = 92/201 (45%), Gaps = 7/201 (3%)

Query: 42  SEDVSGKVVIITGASSGIGEHLAYEYARRGACLALCARREKSLEEVADTAREIGSP-DVI 100
                   + ITGA+SG GE  A  +A  G  L L  RRE+ L+ +A    E+ +   V+
Sbjct: 16  RGSHMSSTLFITGATSGFGEACARRFAEAGWSLVLTGRREERLQALAG---ELSAKTRVL 72

Query: 101 TIRADVSKVDDCRSLVEETMNHFGRLDHLVNNAGISSVALFEDIVNITDFKQIMNINFWG 160
            +  DV       + V+     F  L  L+NNAG++         ++ D+  +++ N  G
Sbjct: 73  PLTLDVRDRAAMSAAVDNLPEEFATLRGLINNAGLALGTDPAQSCDLDDWDTMVDTNIKG 132

Query: 161 SVYTTRFAVPHLRYTK--GKIVVLSSAASWLTAPRMSFYNASKAALVLFFETLRVEL-GS 217
            +Y+TR  +P L        IV L S A     P    Y  +KA +  F   LR +L G+
Sbjct: 133 LLYSTRLLLPRLIAHGAGASIVNLGSVAGKWPYPGSHVYGGTKAFVEQFSLNLRCDLQGT 192

Query: 218 DVGVTIVTPGFIESELTQGKF 238
            V VT + PG  ESE +  +F
Sbjct: 193 GVRVTNLEPGLCESEFSLVRF 213

>1hdc_A 3-alpha, 20 beta-hydroxysteroid dehydrogenase; oxidoreductase; HET: CBO; 2.20A {Streptomyces exfoliatus} SCOP: c.2.1.2 PDB: 2hsd_A* Length = 254

 Score =  157 bits (400), Expect = 7e-48
 Identities = 65/196 (33%), Positives = 97/196 (49%), Gaps = 9/196 (4%)

Query: 44  DVSGKVVIITGASSGIGEHLAYEYARRGACLALCARREKSLEEVADTAREIGSPDVITIR 103
           D+SGK VIITG + G+G   A +    GA + L    +   EE A TARE+G        
Sbjct: 2   DLSGKTVIITGGARGLGAEAARQAVAAGARVVLADVLD---EEGAATARELG-DAARYQH 57

Query: 104 ADVSKVDDCRSLVEETMNHFGRLDHLVNNAGISSVALFEDIVNITDFKQIMNINFWGSVY 163
            DV+  +D + +V      FG +D LVNNAGIS+    E   ++  F++++ IN  G   
Sbjct: 58  LDVTIEEDWQRVVAYAREEFGSVDGLVNNAGISTGMFLETE-SVERFRKVVEINLTGVFI 116

Query: 164 TTRFAVPHLRYTK-GKIVVLSSAASWLTAPRMSFYNASKAALVLFFETLRVELGSDVGVT 222
             +  +P ++    G IV +SSAA  +     S Y ASK  +    +   VELG+D  + 
Sbjct: 117 GMKTVIPAMKDAGGGSIVNISSAAGLMGLALTSSYGASKWGVRGLSKLAAVELGTD-RIR 175

Query: 223 I--VTPGFIESELTQG 236
           +  V PG   + +T  
Sbjct: 176 VNSVHPGMTYTPMTAE 191

>2dtx_A Glucose 1-dehydrogenase related protein; rossmann fold, oxidoreductase; HET: BMA; 1.60A {Thermoplasma acidophilum} PDB: 2dtd_A* 2dte_A* 2zk7_A Length = 264

 Score =  158 bits (401), Expect = 8e-48
 Identities = 48/194 (24%), Positives = 96/194 (49%), Gaps = 14/194 (7%)

Query: 44  DVSGKVVIITGASSGIGEHLAYEYARRGACLALCARREKSLEEVADTAREIGSPDVITIR 103
           D+  KVVI+TGAS GIG  +A  +   G+ +   +  +    +               I 
Sbjct: 5   DLRDKVVIVTGASMGIGRAIAERFVDEGSKVIDLSIHDPGEAKY------------DHIE 52

Query: 104 ADVSKVDDCRSLVEETMNHFGRLDHLVNNAGISSVALFEDIVNITDFKQIMNINFWGSVY 163
            DV+  D  ++ ++     +G +  LVNNAGI S    E + ++ ++++I+++N +G  Y
Sbjct: 53  CDVTNPDQVKASIDHIFKEYGSISVLVNNAGIESYGKIESM-SMGEWRRIIDVNLFGYYY 111

Query: 164 TTRFAVPHLRYTK-GKIVVLSSAASWLTAPRMSFYNASKAALVLFFETLRVELGSDVGVT 222
            ++FA+P++  ++   IV +SS  + +     S Y  SK A++   +++ ++    +   
Sbjct: 112 ASKFAIPYMIRSRDPSIVNISSVQASIITKNASAYVTSKHAVIGLTKSIALDYAPLLRCN 171

Query: 223 IVTPGFIESELTQG 236
            V P  I++ L + 
Sbjct: 172 AVCPATIDTPLVRK 185

>1g0o_A Trihydroxynaphthalene reductase; protein-NADPH-active site inhibitor complex, dinucleotide binding fold, oxidoreductase; HET: NDP PYQ; 1.70A {Magnaporthe grisea} SCOP: c.2.1.2 PDB: 1doh_A* 1g0n_A* 1ybv_A* Length = 283

 Score =  158 bits (402), Expect = 1e-47
 Identities = 59/193 (30%), Positives = 102/193 (52%), Gaps = 8/193 (4%)

Query: 46  SGKVVIITGASSGIGEHLAYEYARRGACLAL-CARREKSLEEVADTAREIGSPDVITIRA 104
            GKV ++TGA  GIG  +A E  RRG  + +  A   +S EEV    ++ GS D   ++A
Sbjct: 28  EGKVALVTGAGRGIGREMAMELGRRGCKVIVNYANSTESAEEVVAAIKKNGS-DAACVKA 86

Query: 105 DVSKVDDCRSLVEETMNHFGRLDHLVNNAGISSVALFEDIVNITDFKQIMNINFWGSVYT 164
           +V  V+D   + EE +  FG+LD + +N+G+ S    +D V   +F ++  IN  G  + 
Sbjct: 87  NVGVVEDIVRMFEEAVKIFGKLDIVCSNSGVVSFGHVKD-VTPEEFDRVFTINTRGQFFV 145

Query: 165 TRFAVPHLRYTKGKIVVLSSAASWLTA-PRMSFYNASKAALVLFFETLRVELGSDVGVTI 223
            R A  HL    G+++++ S      A P+ + Y+ SK A+  F   + +++     +T+
Sbjct: 146 AREAYKHLE-IGGRLILMGSITGQAKAVPKHAVYSGSKGAIETFARCMAIDMADK-KITV 203

Query: 224 --VTPGFIESELT 234
             V PG I++++ 
Sbjct: 204 NVVAPGGIKTDMY 216

>3d3w_A L-xylulose reductase; uronate cycle, short-chain dehydrogenase/reductase(SDR) superfamily, glucose metabolism, acetylation, carbohydrate metabolism; HET: NAP; 1.87A {Homo sapiens} PDB: 1wnt_A* 1pr9_A* Length = 244

 Score =  156 bits (398), Expect = 2e-47
 Identities = 44/196 (22%), Positives = 81/196 (41%), Gaps = 15/196 (7%)

Query: 44  DVSGKVVIITGASSGIGEHLAYEYARRGACLALCARREKSLEEVADTAREIGSPDVITIR 103
            ++G+ V++TGA  GIG          GA +   +R +  L+ +           +  + 
Sbjct: 4   FLAGRRVLVTGAGKGIGRGTVQALHATGARVVAVSRTQADLDSLVRECP-----GIEPVC 58

Query: 104 ADVSKVDDCRSLVEETMNHFGRLDHLVNNAGISSVALFEDIVNITDFKQIMNINFWGSVY 163
            D+   +      E  +   G +D LVNNA ++ +  F + V    F +   +N    + 
Sbjct: 59  VDLGDWEA----TERALGSVGPVDLLVNNAAVALLQPFLE-VTKEAFDRSFEVNLRAVIQ 113

Query: 164 TTRFAVPHL--RYTKGKIVVLSSAASWLTAPRMSFYNASKAALVLFFETLRVELGSDVGV 221
            ++     L  R   G IV +SS  S       S Y ++K AL +  + + +ELG    +
Sbjct: 114 VSQIVARGLIARGVPGAIVNVSSQCSQRAVTNHSVYCSTKGALDMLTKVMALELGPH-KI 172

Query: 222 TI--VTPGFIESELTQ 235
            +  V P  + + + Q
Sbjct: 173 RVNAVNPTVVMTSMGQ 188

>3afn_B Carbonyl reductase; alpha/beta/alpha, rossmann-fold, oxidoreductase; HET: NAP; 1.63A {Sphingomonas SP} PDB: 3afm_A* Length = 258

 Score =  156 bits (398), Expect = 2e-47
 Identities = 62/206 (30%), Positives = 96/206 (46%), Gaps = 14/206 (6%)

Query: 42  SEDVSGKVVIITGASSGIGEHLAYEYARRGACLALCARR-EKSLEEVADTAREIGSPDVI 100
             D+ GK V+ITG+S GIG   A  +AR GA + L  R+   +++E   + R  G  D  
Sbjct: 2   FPDLKGKRVLITGSSQGIGLATARLFARAGAKVGLHGRKAPANIDETIASMRADGG-DAA 60

Query: 101 TIRADVSKVDDCRSLVEETMNHFGRLDHLVNNAG-ISSVALFEDIVNITDFKQIMNINFW 159
              AD++  + C+ LV+E +  FG +D L+NNAG +       +I + T +  +M+ N  
Sbjct: 61  FFAADLATSEACQQLVDEFVAKFGGIDVLINNAGGLVGRKPLPEI-DDTFYDAVMDANIR 119

Query: 160 GSVYTTRFAVPHLR------YTKGKIVVLSS-AASWLTAPRMSFYNASKAALVLFFETLR 212
             V TT+FA+PHL            ++   S A      P    Y A+KA L    +   
Sbjct: 120 SVVMTTKFALPHLAAAAKASGQTSAVISTGSIAGHTGGGPGAGLYGAAKAFLHNVHKNWV 179

Query: 213 VELGSDVGVTI--VTPGFIESELTQG 236
                D GV    V+PG +++     
Sbjct: 180 DFHTKD-GVRFNIVSPGTVDTAFHAD 204

>1cyd_A Carbonyl reductase; short-chain dehydrogenase, oxidoreductase; HET: NAP; 1.80A {Mus musculus} SCOP: c.2.1.2 Length = 244

 Score =  156 bits (397), Expect = 2e-47
 Identities = 43/196 (21%), Positives = 82/196 (41%), Gaps = 15/196 (7%)

Query: 44  DVSGKVVIITGASSGIGEHLAYEYARRGACLALCARREKSLEEVADTAREIGSPDVITIR 103
           + SG   ++TGA  GIG          GA +    R    L  +A          +  + 
Sbjct: 4   NFSGLRALVTGAGKGIGRDTVKALHASGAKVVAVTRTNSDLVSLAKECP-----GIEPVC 58

Query: 104 ADVSKVDDCRSLVEETMNHFGRLDHLVNNAGISSVALFEDIVNITDFKQIMNINFWGSVY 163
            D+   D      E+ +   G +D LVNNA +  +  F + V    F +  ++N      
Sbjct: 59  VDLGDWDA----TEKALGGIGPVDLLVNNAALVIMQPFLE-VTKEAFDRSFSVNLRSVFQ 113

Query: 164 TTRFAVPHL--RYTKGKIVVLSSAASWLTAPRMSFYNASKAALVLFFETLRVELGSDVGV 221
            ++     +  R   G IV +SS  + +T P +  Y+++K A+ +  + + +ELG    +
Sbjct: 114 VSQMVARDMINRGVPGSIVNVSSMVAHVTFPNLITYSSTKGAMTMLTKAMAMELGPH-KI 172

Query: 222 TI--VTPGFIESELTQ 235
            +  V P  + +++ +
Sbjct: 173 RVNSVNPTVVLTDMGK 188

>3rku_A Oxidoreductase YMR226C; substrate fingerprint, short chain oxidoreductase, rossmann oxidoreductase; HET: NAP; 2.60A {Saccharomyces cerevisiae} Length = 287

 Score =  157 bits (400), Expect = 2e-47
 Identities = 62/204 (30%), Positives = 100/204 (49%), Gaps = 8/204 (3%)

Query: 42  SEDVSGKVVIITGASSGIGEHLAYEYARRGAC---LALCARREKSLEEVAD-TAREIGSP 97
           +E ++ K V+ITGAS+GIG+  A EY         L L ARR + LEE+     +E  + 
Sbjct: 28  AERLAKKTVLITGASAGIGKATALEYLEASNGDMKLILAARRLEKLEELKKTIDQEFPNA 87

Query: 98  DVITIRADVSKVDDCRSLVEETMNHFGRLDHLVNNAGIS-SVALFEDIVNITDFKQIMNI 156
            V   + D+++ +  +  +E     F  +D LVNNAG +        I    D + + + 
Sbjct: 88  KVHVAQLDITQAEKIKPFIENLPQEFKDIDILVNNAGKALGSDRVGQI-ATEDIQDVFDT 146

Query: 157 NFWGSVYTTRFAVPHLRYTK-GKIVVLSSAASWLTAPRMSFYNASKAALVLFFETLRVEL 215
           N    +  T+  +P  +    G IV L S A     P  S Y ASK A+  F ++LR EL
Sbjct: 147 NVTALINITQAVLPIFQAKNSGDIVNLGSIAGRDAYPTGSIYCASKFAVGAFTDSLRKEL 206

Query: 216 -GSDVGVTIVTPGFIESELTQGKF 238
             + + V ++ PG +E+E +  ++
Sbjct: 207 INTKIRVILIAPGLVETEFSLVRY 230

>4e3z_A Putative oxidoreductase protein; PSI-biology, structural genomics, protein structure initiati nysgrc,oxidoreductase; 2.00A {Rhizobium etli} Length = 272

 Score =  157 bits (399), Expect = 2e-47
 Identities = 61/208 (29%), Positives = 99/208 (47%), Gaps = 12/208 (5%)

Query: 46  SGKVVIITGASSGIGEHLAYEYARRGACLAL-CARREKSLEEVADTAREIGSPDVITIRA 104
              VV++TG S GIG  +    AR+G  + +  A   ++ + V     E G  + + I  
Sbjct: 25  DTPVVLVTGGSRGIGAAVCRLAARQGWRVGVNYAANREAADAVVAAITESGG-EAVAIPG 83

Query: 105 DVSKVDDCRSLVEETMNHFGRLDHLVNNAGISSV-ALFEDIVNITDFKQIMNINFWGSVY 163
           DV    D  ++       FGRLD LVNNAGI       +++ ++   ++++ +N  GS+ 
Sbjct: 84  DVGNAADIAAMFSAVDRQFGRLDGLVNNAGIVDYPQRVDEM-SVERIERMLRVNVTGSIL 142

Query: 164 TTRFAVPHLRYTK----GKIVVLSSAASWLTAP-RMSFYNASKAALVLFFETLRVELGSD 218
               AV  +        G IV +SS A+ L +  +   Y ASKAA+  F   L  E+ ++
Sbjct: 143 CAAEAVRRMSRLYSGQGGAIVNVSSMAAILGSATQYVDYAASKAAIDTFTIGLAREVAAE 202

Query: 219 VGVTI--VTPGFIESELTQGKFLTGRRQ 244
            G+ +  V PG IE++L     L  R +
Sbjct: 203 -GIRVNAVRPGIIETDLHASGGLPDRAR 229

>3uxy_A Short-chain dehydrogenase/reductase SDR; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; HET: NAD; 2.10A {Rhodobacter sphaeroides} Length = 266

 Score =  156 bits (398), Expect = 2e-47
 Identities = 44/195 (22%), Positives = 76/195 (38%), Gaps = 17/195 (8%)

Query: 44  DVSGKVVIITGASSGIGEHLAYEYARRGACLALCARREKSLEEVADTAREIGSPDVITIR 103
              GKV ++TGA+ GIG  +       GA +A+  R    +               + + 
Sbjct: 25  GFEGKVALVTGAAGGIGGAVVTALRAAGARVAVADRAVAGIAAD------------LHLP 72

Query: 104 ADVSKVDDCRSLVEETMNHFGRLDHLVNNAGISSVALFEDIVNITDFKQIMNINFWGSVY 163
            D+ +      L        GRLD +VNNAG+ S     +     D+   + +N      
Sbjct: 73  GDLREAAYADGLPGAVAAGLGRLDIVVNNAGVISRGRITE-TTDADWSLSLGVNVEAPFR 131

Query: 164 TTRFAVPHLRYTK-GKIVVLSSAASWLTAPRMSFYNASKAALVLFFETLRVELGSDVGVT 222
             R A+P +     G IV ++S       P  + Y  +KAAL    + + ++     G+ 
Sbjct: 132 ICRAAIPLMAAAGGGAIVNVASCWGLRPGPGHALYCLTKAALASLTQCMGMDHAPQ-GIR 190

Query: 223 I--VTPGFIESELTQ 235
           I  V P  + + + +
Sbjct: 191 INAVCPNEVNTPMLR 205

>1ja9_A 4HNR, 1,3,6,8-tetrahydroxynaphthalene reductase; protein-NADPH-active site inhibitor complex, oxidoreductase, chain dehydrogenase; HET: NDP PYQ; 1.50A {Magnaporthe grisea} SCOP: c.2.1.2 Length = 274

 Score =  157 bits (399), Expect = 2e-47
 Identities = 59/193 (30%), Positives = 105/193 (54%), Gaps = 6/193 (3%)

Query: 46  SGKVVIITGASSGIGEHLAYEYARRGACLAL-CARREKSLEEVADTAREIGSPDVITIRA 104
           +GKV + TGA  GIG  +A E  RRGA + +      K+ EEV    +++G+   + I+A
Sbjct: 20  AGKVALTTGAGRGIGRGIAIELGRRGASVVVNYGSSSKAAEEVVAELKKLGA-QGVAIQA 78

Query: 105 DVSKVDDCRSLVEETMNHFGRLDHLVNNAGISSVALFEDIVNITDFKQIMNINFWGSVYT 164
           D+SK  +  +L ++ ++HFG LD +++N+G+       + V    F ++ N+N  G  + 
Sbjct: 79  DISKPSEVVALFDKAVSHFGGLDFVMSNSGMEVWCDELE-VTQELFDKVFNLNTRGQFFV 137

Query: 165 TRFAVPHLRYTKGKIVVLSSAASWLTA-PRMSFYNASKAALVLFFETLRVELGS-DVGVT 222
            +  + H R   G+I++ SS A+ +T  P  + Y  SKAA+  F     V+ G+  V V 
Sbjct: 138 AQQGLKHCR-RGGRIILTSSIAAVMTGIPNHALYAGSKAAVEGFCRAFAVDCGAKGVTVN 196

Query: 223 IVTPGFIESELTQ 235
            + PG +++++  
Sbjct: 197 CIAPGGVKTDMFD 209

>1zk4_A R-specific alcohol dehydrogenase; short chain reductases/dehydrogenases, magnesium dependence, oxidoreductase; HET: NAP; 1.00A {Lactobacillus brevis} SCOP: c.2.1.2 PDB: 1nxq_A* 1zjy_A* 1zjz_A* 1zk0_A* 1zk1_A* 1zk2_A 1zk3_A Length = 251

 Score =  156 bits (397), Expect = 2e-47
 Identities = 55/198 (27%), Positives = 97/198 (48%), Gaps = 10/198 (5%)

Query: 45  VSGKVVIITGASSGIGEHLAYEYARRGACLALCARREKSLEEVADTAREIGSPD-VITIR 103
           + GKV IITG + GIG  +A ++   GA + +  R     E+ A     +G+PD +   +
Sbjct: 4   LDGKVAIITGGTLGIGLAIATKFVEEGAKVMITGRHSDVGEKAAK---SVGTPDQIQFFQ 60

Query: 104 ADVSKVDDCRSLVEETMNHFGRLDHLVNNAGISSVALFEDIVNITDFKQIMNINFWGSVY 163
            D S  D    L + T   FG +  LVNNAGI+     E+     ++++++ +N  G  +
Sbjct: 61  HDSSDEDGWTKLFDATEKAFGPVSTLVNNAGIAVNKSVEE-TTTAEWRKLLAVNLDGVFF 119

Query: 164 TTRFAVPHLRYTK--GKIVVLSSAASWLTAPRMSFYNASKAALVLFFETLRVELGS-DVG 220
            TR  +  ++       I+ +SS   ++  P +  YNASK A+ +  ++  ++    D  
Sbjct: 120 GTRLGIQRMKNKGLGASIINMSSIEGFVGDPSLGAYNASKGAVRIMSKSAALDCALKDYD 179

Query: 221 VTI--VTPGFIESELTQG 236
           V +  V PG+I++ L   
Sbjct: 180 VRVNTVHPGYIKTPLVDD 197

>3kvo_A Hydroxysteroid dehydrogenase-like protein 2; HSDL2, human hydroxysteroid dehydrogenase like 2, SDHL2, STR genomics, structural genomics consortium; HET: NAP; 2.25A {Homo sapiens} Length = 346

 Score =  158 bits (402), Expect = 3e-47
 Identities = 49/200 (24%), Positives = 87/200 (43%), Gaps = 11/200 (5%)

Query: 46  SGKVVIITGASSGIGEHLAYEYARRGACLALCARRE----KSLEEVADTAREIGSP--DV 99
           +G  V ITGAS GIG+ +A + A+ GA + + A+      K L  +   A EI +     
Sbjct: 44  AGCTVFITGASRGIGKAIALKAAKDGANIVIAAKTAQPHPKLLGTIYTAAEEIEAVGGKA 103

Query: 100 ITIRADVSKVDDCRSLVEETMNHFGRLDHLVNNAGISSVALFEDIVNITDFKQIMNINFW 159
           +    DV       + VE+ +  FG +D LVNNA   S+    D         +MN+N  
Sbjct: 104 LPCIVDVRDEQQISAAVEKAIKKFGGIDILVNNASAISLTNTLDT-PTKRLDLMMNVNTR 162

Query: 160 GSVYTTRFAVPHLRYTK-GKIVVLSSAASWL--TAPRMSFYNASKAALVLFFETLRVELG 216
           G+   ++  +P+L+ +K   I+ +S   +       +   Y  +K  + ++   +  E  
Sbjct: 163 GTYLASKACIPYLKKSKVAHILNISPPLNLNPVWFKQHCAYTIAKYGMSMYVLGMAEEFK 222

Query: 217 SDVGVTIVTPG-FIESELTQ 235
            ++ V  + P   I +    
Sbjct: 223 GEIAVNALWPKTAIHTAAMD 242

>3v2g_A 3-oxoacyl-[acyl-carrier-protein] reductase; structural genomics, PSI-biology, protein structure initiati nysgrc; 2.30A {Sinorhizobium meliloti} Length = 271

 Score =  156 bits (396), Expect = 5e-47
 Identities = 64/197 (32%), Positives = 96/197 (48%), Gaps = 8/197 (4%)

Query: 42  SEDVSGKVVIITGASSGIGEHLAYEYARRGACLAL-CARREKSLEEVADTAREIGSPDVI 100
           S  ++GK   +TG S GIG  +A   A  GA +AL      +  + V     + G    +
Sbjct: 26  SISLAGKTAFVTGGSRGIGAAIAKRLALEGAAVALTYVNAAERAQAVVSEIEQAGG-RAV 84

Query: 101 TIRADVSKVDDCRSLVEETMNHFGRLDHLVNNAGISSVALFEDIVNITDFKQIMNINFWG 160
            IRAD    +     + ET+   G LD LVN+AGI   A  E+   + DF ++M +NF  
Sbjct: 85  AIRADNRDAEAIEQAIRETVEALGGLDILVNSAGIWHSAPLEET-TVADFDEVMAVNFRA 143

Query: 161 SVYTTRFAVPHLRYTKGKIVVLSSAASWLTA-PRMSFYNASKAALVLFFETLRVELGSDV 219
                R A  HL    G+I+ + S  + L   P +S Y+ASKAAL    + L  +LG   
Sbjct: 144 PFVAIRSASRHLG-DGGRIITIGSNLAELVPWPGISLYSASKAALAGLTKGLARDLGPR- 201

Query: 220 GVTI--VTPGFIESELT 234
           G+T+  V PG  ++++ 
Sbjct: 202 GITVNIVHPGSTDTDMN 218

>3is3_A 17BETA-hydroxysteroid dehydrogenase; short chain dehydrogenase/REDU SDR, fungi, oxidoreductase; HET: GOL; 1.48A {Cochliobolus lunatus} PDB: 3qwf_A* 3qwh_A* 3qwi_A* 3itd_A Length = 270

 Score =  155 bits (395), Expect = 7e-47
 Identities = 60/194 (30%), Positives = 99/194 (51%), Gaps = 8/194 (4%)

Query: 46  SGKVVIITGASSGIGEHLAYEYARRGACLAL-CARREKSLEEVADTAREIGSPDVITIRA 104
            GKV ++TG+  GIG  +A    R GA + +  A   K  E+V    + +GS D I I+A
Sbjct: 17  DGKVALVTGSGRGIGAAVAVHLGRLGAKVVVNYANSTKDAEKVVSEIKALGS-DAIAIKA 75

Query: 105 DVSKVDDCRSLVEETMNHFGRLDHLVNNAGISSVALFEDIVNITDFKQIMNINFWGSVYT 164
           D+ +V +   L ++ + HFG LD  V+N+G+ S    +D V   +F ++ ++N  G  + 
Sbjct: 76  DIRQVPEIVKLFDQAVAHFGHLDIAVSNSGVVSFGHLKD-VTEEEFDRVFSLNTRGQFFV 134

Query: 165 TRFAVPHLRYTKGKIVVLSS-AASWLTAPRMSFYNASKAALVLFFETLRVELGSDVGVTI 223
            R A  HL    G+IV+ SS  +   + P+ S Y+ SK A+  F      + G    +T+
Sbjct: 135 AREAYRHLT-EGGRIVLTSSNTSKDFSVPKHSLYSGSKGAVDSFVRIFSKDCGDK-KITV 192

Query: 224 --VTPGFIESELTQ 235
             V PG   +++  
Sbjct: 193 NAVAPGGTVTDMFH 206

>1nff_A Putative oxidoreductase RV2002; directed evolution, GFP, SDR, hydroxysteroid dehydrogenase, structural genomics, PSI; HET: NAD; 1.80A {Mycobacterium tuberculosis} SCOP: c.2.1.2 PDB: 1nfq_A* 1nfr_A* Length = 260

 Score =  154 bits (393), Expect = 1e-46
 Identities = 47/198 (23%), Positives = 94/198 (47%), Gaps = 9/198 (4%)

Query: 42  SEDVSGKVVIITGASSGIGEHLAYEYARRGACLALCARREKSLEEVADTAREIGSPDVIT 101
           S  ++GKV +++G + G+G          GA +      ++  + +A    E+       
Sbjct: 2   SGRLTGKVALVSGGARGMGASHVRAMVAEGAKVVFGDILDEEGKAMAA---ELA-DAARY 57

Query: 102 IRADVSKVDDCRSLVEETMNHFGRLDHLVNNAGISSVALFEDIVNITDFKQIMNINFWGS 161
           +  DV++    ++ V+  +  FG L  LVNNAGI ++   ED   +T++++I+++N  G 
Sbjct: 58  VHLDVTQPAQWKAAVDTAVTAFGGLHVLVNNAGILNIGTIEDY-ALTEWQRILDVNLTGV 116

Query: 162 VYTTRFAVPHLRYT-KGKIVVLSSAASWLTAPRMSFYNASKAALVLFFETLRVELGSDVG 220
               R  V  ++   +G I+ +SS            Y A+K A+    ++  +ELG   G
Sbjct: 117 FLGIRAVVKPMKEAGRGSIINISSIEGLAGTVACHGYTATKFAVRGLTKSTALELGPS-G 175

Query: 221 VTI--VTPGFIESELTQG 236
           + +  + PG +++ +T  
Sbjct: 176 IRVNSIHPGLVKTPMTDW 193

>2gdz_A NAD+-dependent 15-hydroxyprostaglandin dehydrogen; dehydrogenase, structural genomics, SH dehydrogenase/reductase, inflammation; HET: NAD; 1.65A {Homo sapiens} SCOP: c.2.1.2 Length = 267

 Score =  155 bits (393), Expect = 1e-46
 Identities = 54/204 (26%), Positives = 95/204 (46%), Gaps = 19/204 (9%)

Query: 42  SEDVSGKVVIITGASSGIGEHLAYEYARRGACLALCARREKSLEEVADTAREIGSP-DVI 100
           +  V+GKV ++TGA+ GIG   A     +GA +AL     ++  +      E   P   +
Sbjct: 2   AHMVNGKVALVTGAAQGIGRAFAEALLLKGAKVALVDWNLEAGVQCKAALHEQFEPQKTL 61

Query: 101 TIRADVSKVDDCRSLVEETMNHFGRLDHLVNNAGISSVALFEDIVNITDFKQIMNINFWG 160
            I+ DV+     R    + ++HFGRLD LVNNAG+++           ++++ + IN   
Sbjct: 62  FIQCDVADQQQLRDTFRKVVDHFGRLDILVNNAGVNNEK---------NWEKTLQINLVS 112

Query: 161 SVYTTRFAVPHLRYTK----GKIVVLSSAASWLTAPRMSFYNASKAALVLFFET--LRVE 214
            +  T   + ++        G I+ +SS A  +   +   Y ASK  +V F  +  L   
Sbjct: 113 VISGTYLGLDYMSKQNGGEGGIIINMSSLAGLMPVAQQPVYCASKHGIVGFTRSAALAAN 172

Query: 215 LGSDVGVTI--VTPGFIESELTQG 236
           L +  GV +  + PGF+ + + + 
Sbjct: 173 LMNS-GVRLNAICPGFVNTAILES 195

>3tsc_A Putative oxidoreductase; structural genomics, seattle structural genomics center for infectious disease, ssgcid, nucleotide; HET: NAD; 2.05A {Mycobacterium avium subsp} Length = 277

 Score =  155 bits (393), Expect = 2e-46
 Identities = 58/217 (26%), Positives = 89/217 (41%), Gaps = 20/217 (9%)

Query: 45  VSGKVVIITGASSGIGEHLAYEYARRGACLALC-------------ARREKSLEEVADTA 91
           + G+V  ITGA+ G G   A   A  GA +                      L E     
Sbjct: 9   LEGRVAFITGAARGQGRAHAVRMAAEGADIIAVDIAGKLPSCVPYDPASPDDLSETVRLV 68

Query: 92  REIGSPDVITIRADVSKVDDCRSLVEETMNHFGRLDHLVNNAGISSVALFEDIVNITDFK 151
                  ++    D    D  R +V++ +   GRLD +V NAG+++   ++DI    DF+
Sbjct: 69  EAANR-RIVAAVVDTRDFDRLRKVVDDGVAALGRLDIIVANAGVAAPQAWDDI-TPEDFR 126

Query: 152 QIMNINFWGSVYTTRFAVPHL--RYTKGKIVVLSSAASWLTAPRMSFYNASKAALVLFFE 209
            +M+IN  G+  T     P +      G I+++SSAA     P M  Y ASK A+     
Sbjct: 127 DVMDINVTGTWNTVMAGAPRIIEGGRGGSIILISSAAGMKMQPFMIHYTASKHAVTGLAR 186

Query: 210 TLRVELGSDVGVTI--VTPGFIESELTQGKFLTGRRQ 244
               ELG    + +  V PG + + +  G  +T   Q
Sbjct: 187 AFAAELGKH-SIRVNSVHPGPVNTPMGSGDMVTAVGQ 222

>2a4k_A 3-oxoacyl-[acyl carrier protein] reductase; reductase,hyperthermophIle, structural genomics, PSI, protei structure initiative; 2.30A {Thermus thermophilus} SCOP: c.2.1.2 Length = 263

 Score =  154 bits (391), Expect = 2e-46
 Identities = 58/195 (29%), Positives = 98/195 (50%), Gaps = 10/195 (5%)

Query: 44  DVSGKVVIITGASSGIGEHLAYEYARRGACLALCARREKSLEEVADTAREIGSPDVITIR 103
            +SGK +++TGA+SGIG      +AR GA L    R E     +A+    + + + I + 
Sbjct: 3   RLSGKTILVTGAASGIGRAALDLFAREGASLVAVDREE---RLLAEAVAALEA-EAIAVV 58

Query: 104 ADVSKVDDCRSLVEETMNHFGRLDHLVNNAGISSVALFEDIVNITDFKQIMNINFWGSVY 163
           ADVS      ++  E +  FGRL  + + AG++  AL  ++  +  +++++ +N  GS  
Sbjct: 59  ADVSDPKAVEAVFAEALEEFGRLHGVAHFAGVAHSALSWNL-PLEAWEKVLRVNLTGSFL 117

Query: 164 TTRFAVPHLRYTKGKIVVLSSAASWLTAPRMSFYNASKAALVLFFETLRVELGSDVGVTI 223
             R A   L    G +V+  S  + L A  ++ Y A K  +V    TL +EL    GV +
Sbjct: 118 VARKAGEVLE-EGGSLVLTGS-VAGLGAFGLAHYAAGKLGVVGLARTLALELARK-GVRV 174

Query: 224 --VTPGFIESELTQG 236
             + PG I++ +T G
Sbjct: 175 NVLLPGLIQTPMTAG 189

>3u5t_A 3-oxoacyl-[acyl-carrier-protein] reductase; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; 2.40A {Sinorhizobium meliloti} Length = 267

 Score =  154 bits (391), Expect = 3e-46
 Identities = 62/191 (32%), Positives = 89/191 (46%), Gaps = 5/191 (2%)

Query: 46  SGKVVIITGASSGIGEHLAYEYARRGACLAL-CARREKSLEEVADTAREIGSPDVITIRA 104
           + KV I+TGAS GIG  +A   A  G  + +  A +  + EEVA      G    +T +A
Sbjct: 26  TNKVAIVTGASRGIGAAIAARLASDGFTVVINYAGKAAAAEEVAGKIEAAGG-KALTAQA 84

Query: 105 DVSKVDDCRSLVEETMNHFGRLDHLVNNAGISSVALFEDIVNITDFKQIMNINFWGSVYT 164
           DVS     R L       FG +D LVNNAGI  +    +      F +++ +N  G+  T
Sbjct: 85  DVSDPAAVRRLFATAEEAFGGVDVLVNNAGIMPLTTIAET-GDAVFDRVIAVNLKGTFNT 143

Query: 165 TRFAVPHLRYTKGKIVVLSSAASWLTAPRMSFYNASKAALVLFFETLRVELGS-DVGVTI 223
            R A   LR   G+I+ +S++   L  P    Y A+KA +      L  EL   D+ V  
Sbjct: 144 LREAAQRLR-VGGRIINMSTSQVGLLHPSYGIYAAAKAGVEAMTHVLSKELRGRDITVNA 202

Query: 224 VTPGFIESELT 234
           V PG   ++L 
Sbjct: 203 VAPGPTATDLF 213

>3t4x_A Oxidoreductase, short chain dehydrogenase/reducta; structural genomics, center for structural genomics of infec diseases, csgid; 2.80A {Bacillus anthracis} Length = 267

 Score =  153 bits (390), Expect = 3e-46
 Identities = 46/196 (23%), Positives = 94/196 (47%), Gaps = 10/196 (5%)

Query: 44  DVSGKVVIITGASSGIGEHLAYEYARRGACLALCARREKSLEEVADTAREIGSP-DVITI 102
            + GK  ++TG+++GIG+ +A      GA + +  RRE+++ E     R       +  +
Sbjct: 7   QLKGKTALVTGSTAGIGKAIATSLVAEGANVLINGRREENVNETIKEIRAQYPDAILQPV 66

Query: 103 RADVSKVDDCRSLVEETMNHFGRLDHLVNNAGISSVALFEDIVNITDFKQIMNINFWGSV 162
            AD+     C+ ++E+    + ++D L+NN GI     + DI    D+ ++  +N    V
Sbjct: 67  VADLGTEQGCQDVIEK----YPKVDILINNLGIFEPVEYFDI-PDEDWFKLFEVNIMSGV 121

Query: 163 YTTRFAVPHLRYTK-GKIVVLSSAASWLTAPRMSFYNASKAALVLFFETLRVELGSDVGV 221
             TR  +  +   K G+++ ++S A+ + +  M+ Y+A+K   +    +L         V
Sbjct: 122 RLTRSYLKKMIERKEGRVIFIASEAAIMPSQEMAHYSATKTMQLSLSRSLAELTTGT-NV 180

Query: 222 TI--VTPGFIESELTQ 235
           T+  + PG   +E  +
Sbjct: 181 TVNTIMPGSTLTEGVE 196

>2z1n_A Dehydrogenase; reductase, SDR, oxidoreductase; 1.80A {Aeropyrum pernix} Length = 260

 Score =  153 bits (389), Expect = 4e-46
 Identities = 49/196 (25%), Positives = 84/196 (42%), Gaps = 7/196 (3%)

Query: 44  DVSGKVVIITGASSGIGEHLAYEYARRGACLALCARREKSLEEVADTAREIGS-PDVITI 102
            + GK+ ++T  SSG+G   A E AR GA L L +R  + LE  A     + S   V  +
Sbjct: 4   GIQGKLAVVTAGSSGLGFASALELARNGARLLLFSRNREKLEAAASRIASLVSGAQVDIV 63

Query: 103 RADVSKVDDCRSLVEETMNHFGRLDHLVNNAGISSVALFEDIVNITDFKQIMNINFWGSV 162
             D+ +  D   L E+     G  D LV + G      F ++  + D+ +   +    +V
Sbjct: 64  AGDIREPGDIDRLFEKA-RDLGGADILVYSTGGPRPGRFMEL-GVEDWDESYRLLARSAV 121

Query: 163 YTTRFAVPHLRYTK-GKIVVLSSAASWLTAPRMSFYNASKAALVLFFETLRVELGSDVGV 221
           +  R A   +     G++V + S         ++  N  +  ++    TL +EL    GV
Sbjct: 122 WVGRRAAEQMVEKGWGRMVYIGSVTLLRPWQDLALSNIMRLPVIGVVRTLALELAPH-GV 180

Query: 222 TI--VTPGFIESELTQ 235
           T+  V P  I ++  +
Sbjct: 181 TVNAVLPSLILTDRVR 196

>2q2v_A Beta-D-hydroxybutyrate dehydrogenase; SDR, oxidoreductase; HET: NAD; 1.90A {Pseudomonas putida} PDB: 2q2q_A* 2q2w_A Length = 255

 Score =  153 bits (389), Expect = 4e-46
 Identities = 54/194 (27%), Positives = 90/194 (46%), Gaps = 8/194 (4%)

Query: 46  SGKVVIITGASSGIGEHLAYEYARRGACLALCARREKSLEEVADTAREIGSPDVITIRAD 105
            GK  ++TG++SGIG  +A   AR GA + L    +             G    +   AD
Sbjct: 3   KGKTALVTGSTSGIGLGIAQVLARAGANIVLNGFGDP--APALAEIARHGV-KAVHHPAD 59

Query: 106 VSKVDDCRSLVEETMNHFGRLDHLVNNAGISSVALFEDIVNITDFKQIMNINFWGSVYTT 165
           +S V    +L       FG +D LVNNAGI  VA  E    +  + +I+ +N     + T
Sbjct: 60  LSDVAQIEALFALAEREFGGVDILVNNAGIQHVAPVEQF-PLESWDKIIALNLSAVFHGT 118

Query: 166 RFAVPHLRYTK-GKIVVLSSAASWLTAPRMSFYNASKAALVLFFETLRVELGSDVGVTI- 223
           R A+P +R    G+I+ ++S    + +   + Y A+K  +V   + + +E  +   VT  
Sbjct: 119 RLALPGMRARNWGRIINIASVHGLVGSTGKAAYVAAKHGVVGLTKVVGLETATS-NVTCN 177

Query: 224 -VTPGFIESELTQG 236
            + PG++ + L Q 
Sbjct: 178 AICPGWVLTPLVQK 191

>1h5q_A NADP-dependent mannitol dehydrogenase; oxidoreductase, mannitol metabolism; HET: NAP; 1.50A {Agaricus bisporus} SCOP: c.2.1.2 Length = 265

 Score =  153 bits (389), Expect = 5e-46
 Identities = 54/205 (26%), Positives = 88/205 (42%), Gaps = 13/205 (6%)

Query: 41  FSEDVSGKVVIITGASSGIGEHLAYEYARRGACLALCARREKSLEEVADTAREIGSPDVI 100
           F+     K +I+TG + GIG       A  GA +A+  R      EV +   +       
Sbjct: 8   FTISFVNKTIIVTGGNRGIGLAFTRAVAAAGANVAVIYRSAADAVEVTEKVGKEFGVKTK 67

Query: 101 TIRADVSKVDDCRSLVEETMNHFGRLDHLVNNAGISSVALFEDIVNITDFKQIMNINFWG 160
             + DVS  D     +++     G +  L+ NAG+S V    + +   DF  + ++N +G
Sbjct: 68  AYQCDVSNTDIVTKTIQQIDADLGPISGLIANAGVSVVKPATE-LTHEDFAFVYDVNVFG 126

Query: 161 SVYTTRFAVPHL--RYTKGKIVVLSS-------AASWLTAPRMSFYNASKAALVLFFETL 211
              T R        +  KG IVV SS        +S   +    FYN+SKAA     + L
Sbjct: 127 VFNTCRAVAKLWLQKQQKGSIVVTSSMSSQIINQSSLNGSLTQVFYNSSKAACSNLVKGL 186

Query: 212 RVELGSDVGVTI--VTPGFIESELT 234
             E  S  G+ +  ++PG++ ++ T
Sbjct: 187 AAEWASA-GIRVNALSPGYVNTDQT 210

>1zmo_A Halohydrin dehalogenase; haloalcohol dehalogenase, short- chain dehydrogenase/reductase family, lyase; 2.00A {Arthrobacter SP} Length = 244

 Score =  152 bits (387), Expect = 6e-46
 Identities = 30/194 (15%), Positives = 60/194 (30%), Gaps = 15/194 (7%)

Query: 48  KVVIITGASSGIGEHLAYEYARRGACLALCARREKSL-EEVADTAREIGSPDVITIRADV 106
            + ++T A    G        + G  +           E     +   G           
Sbjct: 2   VIALVTHARHFAGPAAVEALTQDGYTVVCHDASFADAAERQRFESENPG--------TIA 53

Query: 107 SKVDDCRSLVEETMNHFGRLDHLVNNAGISSVALFEDIVNIT--DFKQIMNINFWGSVYT 164
                   LV+ T+ H   +D +V+N  I        +   +  D +Q+        +  
Sbjct: 54  LAEQKPERLVDATLQHGEAIDTIVSNDYIPRPMNRLPLEGTSEADIRQMFEALSIFPILL 113

Query: 165 TRFAVPHLRYTK-GKIVVLSSAASWLTAPRMSFYNASKAALVLFFETLRVELGSDVGVTI 223
            + A+  LR      ++ ++S+           Y  ++AA V   E+    L  D G+ +
Sbjct: 114 LQSAIAPLRAAGGASVIFITSSVGKKPLAYNPLYGPARAATVALVESAAKTLSRD-GILL 172

Query: 224 --VTPGFIESELTQ 235
             + P F  +    
Sbjct: 173 YAIGPNFFNNPTYF 186

>3orf_A Dihydropteridine reductase; alpha-beta-alpha sandwich, rossmann fold, oxidoreductase (AC NADH), NADH binding, oxidoreductase; HET: NAD; 2.16A {Dictyostelium discoideum} Length = 251

 Score =  152 bits (387), Expect = 7e-46
 Identities = 33/193 (17%), Positives = 70/193 (36%), Gaps = 19/193 (9%)

Query: 47  GKVVIITGASSGIGEHLAYEYARRGACLALCARREKSLEEVADTAREIGSPDVITIRADV 106
            K +++ G S  +G  +   +  +         RE    + +                  
Sbjct: 22  SKNILVLGGSGALGAEVVKFFKSKSWNTISIDFRENPNADHS-------------FTIKD 68

Query: 107 SKVDDCRSLVEETMNHFGRLDHLVNNAGI-SSVALFEDIVNITDFKQIMNINFWGSVYTT 165
           S  ++ +S++E+  +   ++D  V  AG  S      D   +   K ++++N + +  + 
Sbjct: 69  SGEEEIKSVIEKINSKSIKVDTFVCAAGGWSGGNASSDE-FLKSVKGMIDMNLYSAFASA 127

Query: 166 RFAVPHLRYTKGKIVVLSSAASWLTAPRMSFYNASKAALVLFFETLRVELGSDV-GVTI- 223
                 L    G  V+  ++A+      M  Y A+KAA     + L  E G    G T  
Sbjct: 128 HIGAKLLN-QGGLFVLTGASAALNRTSGMIAYGATKAATHHIIKDLASENGGLPAGSTSL 186

Query: 224 -VTPGFIESELTQ 235
            + P  +++   +
Sbjct: 187 GILPVTLDTPTNR 199

>4g81_D Putative hexonate dehydrogenase; enzyme function initiative, EFI, structural genomics, dehydr oxidoreductase; 1.90A {Salmonella enterica subsp} Length = 255

 Score =  151 bits (384), Expect = 2e-45
 Identities = 45/196 (22%), Positives = 88/196 (44%), Gaps = 7/196 (3%)

Query: 44  DVSGKVVIITGASSGIGEHLAYEYARRGACLALCARREKSLEEVADTAREIGSPDVITIR 103
           D++GK  ++TG++ G+G   A   A  GA + L   R   L E  DT    G  D   + 
Sbjct: 6   DLTGKTALVTGSARGLGFAYAEGLAAAGARVILNDIRATLLAESVDTLTRKGY-DAHGVA 64

Query: 104 ADVSKVDDCRSLVEETMNHFGRLDHLVNNAGISSVALFEDIVNITDFKQIMNINFWGSVY 163
            DV+      +   +       +D L+NNAGI       + + + +++++++ N   +  
Sbjct: 65  FDVTDELAIEAAFSKLDAEGIHVDILINNAGIQYRKPMVE-LELENWQKVIDTNLTSAFL 123

Query: 164 TTRFAVPHL--RYTKGKIVVLSSAASWLTAPRMSFYNASKAALVLFFETLRVELGSDVGV 221
            +R A   +  R + GKI+ + S  S    P ++ Y A+K  + +   ++  E      +
Sbjct: 124 VSRSAAKRMIARNSGGKIINIGSLTSQAARPTVAPYTAAKGGIKMLTCSMAAEWAQF-NI 182

Query: 222 TI--VTPGFIESELTQ 235
               + PG+I +++  
Sbjct: 183 QTNAIGPGYILTDMNT 198

>1x1t_A D(-)-3-hydroxybutyrate dehydrogenase; NAD, NADH, SDR, short chain dehydrogenase, ketone BODY, beta hydroxybutyrate, oxidoreductase; HET: NAD; 1.52A {Pseudomonas fragi} SCOP: c.2.1.2 PDB: 1wmb_A* 2ztl_A* 2ztv_A* 2ztm_A* 2ztu_A* 2yz7_A 2zea_A* 3eew_A* 3vdq_A* 3vdr_A* Length = 260

 Score =  151 bits (384), Expect = 2e-45
 Identities = 60/195 (30%), Positives = 98/195 (50%), Gaps = 6/195 (3%)

Query: 46  SGKVVIITGASSGIGEHLAYEYARRGACLALC-ARREKSLEEVADTAREIGSPDVITIRA 104
            GKV ++TG++SGIG  +A   A +GA + L        +E+V           V+   A
Sbjct: 3   KGKVAVVTGSTSGIGLGIATALAAQGADIVLNGFGDAAEIEKVRAGLAAQHGVKVLYDGA 62

Query: 105 DVSKVDDCRSLVEETMNHFGRLDHLVNNAGISSVALFEDIVNITDFKQIMNINFWGSVYT 164
           D+SK +  R LV+  +   GR+D LVNNAGI   AL ED      +  I+ +N     + 
Sbjct: 63  DLSKGEAVRGLVDNAVRQMGRIDILVNNAGIQHTALIED-FPTEKWDAILALNLSAVFHG 121

Query: 165 TRFAVPHLRYTK-GKIVVLSSAASWLTAPRMSFYNASKAALVLFFETLRVELGSDVGVTI 223
           T  A+PH++    G+I+ ++SA   + +   S Y A+K  +V F +   +E     G+T 
Sbjct: 122 TAAALPHMKKQGFGRIINIASAHGLVASANKSAYVAAKHGVVGFTKVTALETAGQ-GITA 180

Query: 224 --VTPGFIESELTQG 236
             + PG++ + L + 
Sbjct: 181 NAICPGWVRTPLVEK 195

>3gdg_A Probable NADP-dependent mannitol dehydrogenase; rossmann fold, beta-alpha-beta motifs, open twisted sheet, A NADP, oxidoreductase; 2.30A {Cladosporium herbarum} PDB: 3gdf_A Length = 267

 Score =  151 bits (384), Expect = 3e-45
 Identities = 46/199 (23%), Positives = 90/199 (45%), Gaps = 7/199 (3%)

Query: 44  DVSGKVVIITGAS--SGIGEHLAYEYARRGACLALC-ARREKSLEEVADTAREIGSPDVI 100
            + GKVV++TGAS   G+G   A   A  GA +A+  A R +  EE      +       
Sbjct: 17  SLKGKVVVVTGASGPKGMGIEAARGCAEMGAAVAITYASRAQGAEENVKELEKTYGIKAK 76

Query: 101 TIRADVSKVDDCRSLVEETMNHFGRLDHLVNNAGISSVALFEDIVNITDFKQIMNINFWG 160
             +  V   + C  LV++ +  FG++D  + NAG ++ +   D  ++  +  ++ ++  G
Sbjct: 77  AYKCQVDSYESCEKLVKDVVADFGQIDAFIANAGATADSGILD-GSVEAWNHVVQVDLNG 135

Query: 161 SVYTTRFAVPH-LRYTKGKIVVLSSAASWL--TAPRMSFYNASKAALVLFFETLRVELGS 217
           + +  +    H      G +V+ +S +  +       + YN +KA  +    +L  E   
Sbjct: 136 TFHCAKAVGHHFKERGTGSLVITASMSGHIANFPQEQTSYNVAKAGCIHMARSLANEWRD 195

Query: 218 DVGVTIVTPGFIESELTQG 236
              V  ++PG+I++ L+  
Sbjct: 196 FARVNSISPGYIDTGLSDF 214

>3pgx_A Carveol dehydrogenase; structural genomics, seattle structural genomics center for infectious disease, ssgcid; HET: NAD; 1.85A {Mycobacterium avium} Length = 280

 Score =  151 bits (385), Expect = 3e-45
 Identities = 61/209 (29%), Positives = 91/209 (43%), Gaps = 20/209 (9%)

Query: 45  VSGKVVIITGASSGIGEHLAYEYARRGACLALC-------------ARREKSLEEVADTA 91
           + G+V  ITGA+ G G   A   A  GA +  C                 + L+E A   
Sbjct: 13  LQGRVAFITGAARGQGRSHAVRLAAEGADIIACDICAPVSASVTYAPASPEDLDETARLV 72

Query: 92  REIGSPDVITIRADVSKVDDCRSLVEETMNHFGRLDHLVNNAGISSVALFEDIVNITDFK 151
            + G    +T   DV      R LV + M  FGRLD +V NAG+ S     ++     + 
Sbjct: 73  EDQGR-KALTRVLDVRDDAALRELVADGMEQFGRLDVVVANAGVLSWGRVWEL-TDEQWD 130

Query: 152 QIMNINFWGSVYTTRFAVPHL--RYTKGKIVVLSSAASWLTAPRMSFYNASKAALVLFFE 209
            ++ +N  G+  T R  VP +      G IVV+SS+A     P    Y+ASK  L     
Sbjct: 131 TVIGVNLTGTWRTLRATVPAMIEAGNGGSIVVVSSSAGLKATPGNGHYSASKHGLTALTN 190

Query: 210 TLRVELGSDVGVTI--VTPGFIESELTQG 236
           TL +ELG   G+ +  + P  +E+ + + 
Sbjct: 191 TLAIELGEY-GIRVNSIHPYSVETPMIEP 218

>3t7c_A Carveol dehydrogenase; structural genomics, seattle structural genomics center for infectious disease, ssgcid; HET: NAD; 1.95A {Mycobacterium avium} Length = 299

 Score =  151 bits (385), Expect = 5e-45
 Identities = 55/208 (26%), Positives = 89/208 (42%), Gaps = 18/208 (8%)

Query: 45  VSGKVVIITGASSGIGEHLAYEYARRGACLALC------------ARREKSLEEVADTAR 92
           V GKV  ITGA+ G G   A   AR GA +                     L E      
Sbjct: 26  VEGKVAFITGAARGQGRSHAITLAREGADIIAIDVCKQLDGVKLPMSTPDDLAETVRQVE 85

Query: 93  EIGSPDVITIRADVSKVDDCRSLVEETMNHFGRLDHLVNNAGISSVALFEDIVNITDFKQ 152
            +G   +I  + DV   D  ++ V++ +   GRLD ++ NA ++S     + ++   ++ 
Sbjct: 86  ALGR-RIIASQVDVRDFDAMQAAVDDGVTQLGRLDIVLANAALASEGTRLNRMDPKTWRD 144

Query: 153 IMNINFWGSVYTTRFAVPHLRYTK--GKIVVLSSAASWLTAPRMSFYNASKAALVLFFET 210
           ++++N  G+  T R A+PH+   K  G IV  SS      A  +  Y ASK  L     T
Sbjct: 145 MIDVNLNGAWITARVAIPHIMAGKRGGSIVFTSSIGGLRGAENIGNYIASKHGLHGLMRT 204

Query: 211 LRVELGSDVGVTI--VTPGFIESELTQG 236
           + +ELG    + +  V P  + + +   
Sbjct: 205 MALELGPR-NIRVNIVCPSSVATPMLLN 231

>2qq5_A DHRS1, dehydrogenase/reductase SDR family member 1; short-chain, structura genomics consortium, SGC, oxidoreductase; 1.80A {Homo sapiens} Length = 260

 Score =  150 bits (381), Expect = 6e-45
 Identities = 56/205 (27%), Positives = 88/205 (42%), Gaps = 13/205 (6%)

Query: 46  SGKVVIITGASSGIGEHLAYEYARRGACLALCARREKSLEEVADTAREIGSPDVITIRAD 105
           +G+V ++TGAS GIG  +A +  + GA + +  R   +L  VA  A+ +G    + +  D
Sbjct: 4   NGQVCVVTGASRGIGRGIALQLCKAGATVYITGRHLDTLRVVAQEAQSLGG-QCVPVVCD 62

Query: 106 VSKVDDCRSLVEET-MNHFGRLDHLVNNAGISSVALFEDIVN------ITDFKQIMNINF 158
            S+  + RSL E+      GRLD LVNNA      +             + +  I N+  
Sbjct: 63  SSQESEVRSLFEQVDREQQGRLDVLVNNAYAGVQTILNTRNKAFWETPASMWDDINNVGL 122

Query: 159 WGSVYTTRFAVPHLRYTK-GKIVVLSSAASWLTAPRMSFYNASKAALVLFFETLRVELGS 217
            G  + + +    +     G IVV+SS  S L       Y   KAA          EL  
Sbjct: 123 RGHYFCSVYGARLMVPAGQGLIVVISSPGS-LQYMFNVPYGVGKAACDKLAADCAHELRR 181

Query: 218 DVGVTI--VTPGFIESELTQGKFLT 240
             GV+   + PG +++EL +     
Sbjct: 182 H-GVSCVSLWPGIVQTELLKEHMAK 205

>3sx2_A Putative 3-ketoacyl-(acyl-carrier-protein) reduct; ssgcid, 3-ketoacyl-(acyl-carrier-protein) reductase, mycobac paratuberculosis; HET: NAD; 1.50A {Mycobacterium avium subsp} Length = 278

 Score =  150 bits (382), Expect = 8e-45
 Identities = 52/214 (24%), Positives = 93/214 (43%), Gaps = 27/214 (12%)

Query: 45  VSGKVVIITGASSGIGEHLAYEYARRGACLALC------------ARREKSLEEVADTAR 92
           ++GKV  ITGA+ G G   A   A  GA +                   + L        
Sbjct: 11  LTGKVAFITGAARGQGRAHAVRLAADGADIIAVDLCDQIASVPYPLATPEELAATVKLVE 70

Query: 93  EIGSPDVITIRADVSKVDDCRSLVEETMNHFGRLDHLVNNAGISSVALFEDIVNITDFKQ 152
           +IGS  ++  +ADV   +   + ++  ++  GRLD +V NAGI+ ++  +D      +  
Sbjct: 71  DIGS-RIVARQADVRDRESLSAALQAGLDELGRLDIVVANAGIAPMSAGDD-----GWHD 124

Query: 153 IMNINFWGSVYTTRFAVPHL--RYTKGKIVVLSSAA----SWLTAPRMSFYNASKAALVL 206
           ++++N  G  +T + A+P L  + T G IV++SS+A         P    Y A+K  +V 
Sbjct: 125 VIDVNLTGVYHTIKVAIPTLVKQGTGGSIVLISSSAGLAGVGSADPGSVGYVAAKHGVVG 184

Query: 207 FFETLRVELGSDVGVTI--VTPGFIESELTQGKF 238
                   L     + +  + P  +E+ +   +F
Sbjct: 185 LMRVYANLLAGQ-MIRVNSIHPSGVETPMINNEF 217

>3uve_A Carveol dehydrogenase ((+)-trans-carveol dehydrog; ssgcid, structural genomics, seattle structural genomics CEN infectious disease; HET: NAD PG4; 1.55A {Mycobacterium avium} PDB: 3uwr_A* Length = 286

 Score =  150 bits (382), Expect = 9e-45
 Identities = 56/212 (26%), Positives = 88/212 (41%), Gaps = 22/212 (10%)

Query: 45  VSGKVVIITGASSGIGEHLAYEYARRGACLALC----------------ARREKSLEEVA 88
           V GKV  +TGA+ G G   A   A+ GA +                   A   + L E A
Sbjct: 9   VEGKVAFVTGAARGQGRSHAVRLAQEGADIIAVDICKPIRAGVVDTAIPASTPEDLAETA 68

Query: 89  DTAREIGSPDVITIRADVSKVDDCRSLVEETMNHFGRLDHLVNNAGISSVALFEDIVNIT 148
           D  +      ++T   DV   D  ++ V+  +   GRLD +V NAGI +     D  +  
Sbjct: 69  DLVKGHNR-RIVTAEVDVRDYDALKAAVDSGVEQLGRLDIIVANAGIGNGGDTLDKTSEE 127

Query: 149 DFKQIMNINFWGSVYTTRFAVPHL--RYTKGKIVVLSSAASWLTAPRMSFYNASKAALVL 206
           D+ ++++IN  G   T +  VPH+      G I++ SS       P    Y A+K  +V 
Sbjct: 128 DWTEMIDINLAGVWKTVKAGVPHMIAGGRGGSIILTSSVGGLKAYPHTGHYVAAKHGVVG 187

Query: 207 FFETLRVELGSDVGVTI--VTPGFIESELTQG 236
                 VELG    + +  V P  +++ +   
Sbjct: 188 LMRAFGVELGQH-MIRVNSVHPTHVKTPMLHN 218

>3e03_A Short chain dehydrogenase; structural genomics, PSI-2, protein structure initiative, NEW YORK structural genomix research consortium; 1.69A {Xanthomonas campestris PV} Length = 274

 Score =  150 bits (380), Expect = 1e-44
 Identities = 54/204 (26%), Positives = 86/204 (42%), Gaps = 14/204 (6%)

Query: 44  DVSGKVVIITGASSGIGEHLAYEYARRGACLALCARREK-------SLEEVADTAREIGS 96
            +SGK + ITGAS GIG  +A   AR GA +A+ A+          ++   A      G 
Sbjct: 3   TLSGKTLFITGASRGIGLAIALRAARDGANVAIAAKSAVANPKLPGTIHSAAAAVNAAGG 62

Query: 97  PDVITIRADVSKVDDCRSLVEETMNHFGRLDHLVNNAGISSVALFEDIVNITDFKQIMNI 156
              + ++ D+ + D  R+ V  T++ FG +D LVNNA    +    D   +  F  +  +
Sbjct: 63  -QGLALKCDIREEDQVRAAVAATVDTFGGIDILVNNASAIWLRGTLDT-PMKRFDLMQQV 120

Query: 157 NFWGSVYTTRFAVPHLRYTK-GKIVVLSSAASWLTAPRMSF--YNASKAALVLFFETLRV 213
           N  GS    +  +PHL       I+ L+   S   A   +   Y  +K  + L    L  
Sbjct: 121 NARGSFVCAQACLPHLLQAPNPHILTLAPPPSLNPAWWGAHTGYTLAKMGMSLVTLGLAA 180

Query: 214 ELGSD-VGVTIVTPG-FIESELTQ 235
           E G   V +  + P   I ++   
Sbjct: 181 EFGPQGVAINALWPRTVIATDAIN 204

>3u9l_A 3-oxoacyl-[acyl-carrier-protein] reductase; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; 2.10A {Sinorhizobium meliloti} Length = 324

 Score =  151 bits (383), Expect = 1e-44
 Identities = 56/196 (28%), Positives = 91/196 (46%), Gaps = 10/196 (5%)

Query: 46  SGKVVIITGASSGIGEHLAYEYARRGACLALCARR-----EKSLEEVADTAREIGSPDVI 100
           S K+++ITGASSG G   A   A  G  +    R        ++E +A  AR+    D+ 
Sbjct: 4   SKKIILITGASSGFGRLTAEALAGAGHRVYASMRDIVGRNASNVEAIAGFARDND-VDLR 62

Query: 101 TIRADVSKVDDCRSLVEETMNHFGRLDHLVNNAGISSVALFEDIVNITDFKQIMNINFWG 160
           T+  DV         +++ +   GR+D L++NAG       E       F ++ +IN   
Sbjct: 63  TLELDVQSQVSVDRAIDQIIGEDGRIDVLIHNAGHMVFGPAEA-FTPEQFAELYDINVLS 121

Query: 161 SVYTTRFAVPHLRYTK-GKIVVLSSAASWL-TAPRMSFYNASKAALVLFFETLRVELGS- 217
           +    R A+PH+R  K G ++ +SS++S   T P ++ Y A+KAA+         EL   
Sbjct: 122 TQRVNRAALPHMRRQKHGLLIWISSSSSAGGTPPYLAPYFAAKAAMDAIAVQYARELSRW 181

Query: 218 DVGVTIVTPGFIESEL 233
            +  +I+ PG   S  
Sbjct: 182 GIETSIIVPGAFTSGT 197

>3un1_A Probable oxidoreductase; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; 2.45A {Sinorhizobium meliloti} Length = 260

 Score =  149 bits (379), Expect = 2e-44
 Identities = 54/196 (27%), Positives = 87/196 (44%), Gaps = 17/196 (8%)

Query: 44  DVSGKVVIITGASSGIGEHLAYEYARRGACLALCARREKSLEEVADTAREIGSPDVITIR 103
               KVV+ITGAS GIG  L   Y  R   +   +R  K   +           D+ T+ 
Sbjct: 25  RNQQKVVVITGASQGIGAGLVRAYRDRNYRVVATSRSIKPSADP----------DIHTVA 74

Query: 104 ADVSKVDDCRSLVEETMNHFGRLDHLVNNAGISSVALFEDIVNITDFKQIMNINFWGSVY 163
            D+SK +    +V E +  FGR+D LVNNAG+     F ++    D+   + +N  G  +
Sbjct: 75  GDISKPETADRIVREGIERFGRIDSLVNNAGVFLAKPFVEM-TQEDYDHNLGVNVAGFFH 133

Query: 164 TTRFAVPH-LRYTKGKIVVLSSAASWLTAPRMS--FYNASKAALVLFFETLRVELGSDVG 220
            T+ A    L+   G IV ++++        M     + +K  L     +L +E     G
Sbjct: 134 ITQRAAAEMLKQGSGHIVSITTSLVDQPMVGMPSALASLTKGGLNAVTRSLAMEFSRS-G 192

Query: 221 VTI--VTPGFIESELT 234
           V +  V+PG I++ + 
Sbjct: 193 VRVNAVSPGVIKTPMH 208

>3pk0_A Short-chain dehydrogenase/reductase SDR; ssgcid, structural genomics, seattle structural genomics CEN infectious disease; 1.75A {Mycobacterium smegmatis} Length = 262

 Score =  148 bits (377), Expect = 3e-44
 Identities = 56/197 (28%), Positives = 93/197 (47%), Gaps = 6/197 (3%)

Query: 44  DVSGKVVIITGASSGIGEHLAYEYARRGACLALCARREKSLEEVADTAREIGSPDVITIR 103
           D+ G+ V++TG + GIG  +A  +AR GA +A+  R    ++       ++GS  VI ++
Sbjct: 7   DLQGRSVVVTGGTKGIGRGIATVFARAGANVAVAGRSTADIDACVADLDQLGSGKVIGVQ 66

Query: 104 ADVSKVDDCRSLVEETMNHFGRLDHLVNNAGISSVALFEDIVNITDFKQIMNINFWGSVY 163
            DVS    C +L    +  FG +D +  NAG+   A    +        I  +N  G+ Y
Sbjct: 67  TDVSDRAQCDALAGRAVEEFGGIDVVCANAGVFPDAPLATM-TPEQLNGIFAVNVNGTFY 125

Query: 164 TTRFAVPH-LRYTKGKIVVLSSAASWLTA-PRMSFYNASKAALVLFFETLRVELGSDVGV 221
             +  +   +    G++V+ SS    +T  P  S Y A+KAA + F  T  +EL     +
Sbjct: 126 AVQACLDALIASGSGRVVLTSSITGPITGYPGWSHYGATKAAQLGFMRTAAIELAPH-KI 184

Query: 222 TI--VTPGFIESELTQG 236
           T+  + PG I +E    
Sbjct: 185 TVNAIMPGNIMTEGLLE 201

>3icc_A Putative 3-oxoacyl-(acyl carrier protein) reducta; structural genomics, putative 3-oxoacyl-(acyl carrier protei reductase, oxidoreductase; HET: NAP MES; 1.87A {Bacillus anthracis str} Length = 255

 Score =  148 bits (376), Expect = 4e-44
 Identities = 54/199 (27%), Positives = 96/199 (48%), Gaps = 11/199 (5%)

Query: 46  SGKVVIITGASSGIGEHLAYEYARRGACLAL-CARREKSLEEVADTAREIGSPDVITIRA 104
            GKV ++TGAS GIG  +A   A  GA +A+    R++  EE     +  G     +I A
Sbjct: 6   KGKVALVTGASRGIGRAIAKRLANDGALVAIHYGNRKEEAEETVYEIQSNGG-SAFSIGA 64

Query: 105 DVSKVDDCRSLVEETMNHF------GRLDHLVNNAGISSVALFEDIVNITDFKQIMNINF 158
           ++  +    +L     N         + D L+NNAGI   A  E+      F +++++N 
Sbjct: 65  NLESLHGVEALYSSLDNELQNRTGSTKFDILINNAGIGPGAFIEE-TTEQFFDRMVSVNA 123

Query: 159 WGSVYTTRFAVPHLRYTKGKIVVLSSAASWLTAPRMSFYNASKAALVLFFETLRVELGS- 217
               +  + A+  LR    +I+ +SSAA+ ++ P    Y+ +K A+     TL  +LG+ 
Sbjct: 124 KAPFFIIQQALSRLR-DNSRIINISSAATRISLPDFIAYSMTKGAINTMTFTLAKQLGAR 182

Query: 218 DVGVTIVTPGFIESELTQG 236
            + V  + PGF+++++   
Sbjct: 183 GITVNAILPGFVKTDMNAE 201

>2bgk_A Rhizome secoisolariciresinol dehydrogenase; oxidoreductase; 1.6A {Podophyllum peltatum} SCOP: c.2.1.2 PDB: 2bgl_A* 2bgm_A* Length = 278

 Score =  148 bits (377), Expect = 4e-44
 Identities = 64/200 (32%), Positives = 102/200 (51%), Gaps = 12/200 (6%)

Query: 46  SGKVVIITGASSGIGEHLAYEYARRGACLALCARREKSLEEVADTAREIGSPD-VITIRA 104
             KV IITG + GIGE  A  + R GA + +    +   ++V +    IGSPD +  +  
Sbjct: 15  QDKVAIITGGAGGIGETTAKLFVRYGAKVVIADIADDHGQKVCN---NIGSPDVISFVHC 71

Query: 105 DVSKVDDCRSLVEETMNHFGRLDHLVNNAGISSVALFEDIVNIT--DFKQIMNINFWGSV 162
           DV+K +D R+LV+ T+   G+LD +  N G+ S      I+     DFK++M+IN +G+ 
Sbjct: 72  DVTKDEDVRNLVDTTIAKHGKLDIMFGNVGVLSTTP-YSILEAGNEDFKRVMDINVYGAF 130

Query: 163 YTTRFAVPHLRYT-KGKIVVLSSAASWLTAPRMSF-YNASKAALVLFFETLRVELGSDVG 220
              + A   +    KG IV  +S +S+     +S  Y A+K A++    +L  ELG   G
Sbjct: 131 LVAKHAARVMIPAKKGSIVFTASISSFTAGEGVSHVYTATKHAVLGLTTSLCTELGEY-G 189

Query: 221 VTI--VTPGFIESELTQGKF 238
           + +  V+P  + S L    F
Sbjct: 190 IRVNCVSPYIVASPLLTDVF 209

>3sc4_A Short chain dehydrogenase (A0QTM2 homolog); ssgcid, NIH, niaid, SBRI, UW, emerald biostructures, structu genomics; 2.50A {Mycobacterium thermoresistibile} Length = 285

 Score =  148 bits (377), Expect = 5e-44
 Identities = 48/202 (23%), Positives = 83/202 (41%), Gaps = 11/202 (5%)

Query: 44  DVSGKVVIITGASSGIGEHLAYEYARRGACLALCARR----EKSLEEVADTAREIGSP-- 97
            + GK + I+G S GIG  +A   A  GA +AL A+      K    +   A+EI     
Sbjct: 6   SLRGKTMFISGGSRGIGLAIAKRVAADGANVALVAKSAEPHPKLPGTIYTAAKEIEEAGG 65

Query: 98  DVITIRADVSKVDDCRSLVEETMNHFGRLDHLVNNAGISSVALFEDIVNITDFKQIMNIN 157
             + I  D+   D   + V +T+  FG +D  VNNA   ++   E++  +  F  +  I 
Sbjct: 66  QALPIVGDIRDGDAVAAAVAKTVEQFGGIDICVNNASAINLGSIEEV-PLKRFDLMNGIQ 124

Query: 158 FWGSVYTTRFAVPHLRYTK-GKIVVLSSAASWLTA-PRMSFYNASKAALVLFFETLRVEL 215
             G+   ++  +PH++      I+ LS          R + Y  +K  + L    +  EL
Sbjct: 125 VRGTYAVSQSCIPHMKGRDNPHILTLSPPIRLEPKWLRPTPYMMAKYGMTLCALGIAEEL 184

Query: 216 GSD-VGVTIVTPG-FIESELTQ 235
               +    + P   + +   Q
Sbjct: 185 RDAGIASNTLWPRTTVATAAVQ 206

>3oec_A Carveol dehydrogenase (mytha.01326.C, A0R518 HOMO; ssgcid, structural genomics; 1.95A {Mycobacterium thermoresistibile} Length = 317

 Score =  149 bits (379), Expect = 6e-44
 Identities = 58/207 (28%), Positives = 96/207 (46%), Gaps = 17/207 (8%)

Query: 45  VSGKVVIITGASSGIGEHLAYEYARRGA---CLALCARREK------SLEEVADTAREIG 95
           + GKV  ITGA+ G G   A   A+ GA    + LC ++        S EE+ +T R + 
Sbjct: 44  LQGKVAFITGAARGQGRTHAVRLAQDGADIVAIDLCRQQPNLDYAQGSPEELKETVRLVE 103

Query: 96  SPD--VITIRADVSKVDDCRSLVEETMNHFGRLDHLVNNAGISSVALFEDIVNITDFKQI 153
                +I  +ADV  +   +++V+E +  FG +D LV+N GIS+      +     +  I
Sbjct: 104 EQGRRIIARQADVRDLASLQAVVDEALAEFGHIDILVSNVGISNQGEVVSL-TDQQWSDI 162

Query: 154 MNINFWGSVYTTRFAVPHL--RYTKGKIVVLSSAASWLTAPRMSFYNASKAALVLFFETL 211
           +  N  G+ +  R  +P +  R   G ++ +SS      AP  S Y ASK  +     +L
Sbjct: 163 LQTNLIGAWHACRAVLPSMIERGQGGSVIFVSSTVGLRGAPGQSHYAASKHGVQGLMLSL 222

Query: 212 RVELGSDVGVTI--VTPGFIESELTQG 236
             E+G    + +  V PG + +E+   
Sbjct: 223 ANEVGRH-NIRVNSVNPGAVNTEMALN 248

>1vl8_A Gluconate 5-dehydrogenase; TM0441, structural genomics, JCSG structure initiative, PSI, joint center for structural GENO oxidoreductase; HET: NAP; 2.07A {Thermotoga maritima} SCOP: c.2.1.2 Length = 267

 Score =  148 bits (375), Expect = 7e-44
 Identities = 53/196 (27%), Positives = 94/196 (47%), Gaps = 6/196 (3%)

Query: 44  DVSGKVVIITGASSGIGEHLAYEYARRGACLALCARREKSLEEVADTAREIGSPDVITIR 103
           D+ G+V ++TG S G+G  +A   A  G  + + +R  +   E A    E    + +  R
Sbjct: 18  DLRGRVALVTGGSRGLGFGIAQGLAEAGCSVVVASRNLEEASEAAQKLTEKYGVETMAFR 77

Query: 104 ADVSKVDDCRSLVEETMNHFGRLDHLVNNAGISSVALFEDIVNITDFKQIMNINFWGSVY 163
            DVS  ++ + L+E     FG+LD +VN AGI+     E+   + +F+Q++ +N +G+ Y
Sbjct: 78  CDVSNYEEVKKLLEAVKEKFGKLDTVVNAAGINRRHPAEE-FPLDEFRQVIEVNLFGTYY 136

Query: 164 TTRFAVPH-LRYTKGKIVVLSSAASWLTA-PRMSFYNASKAALVLFFETLRVELGSDVGV 221
             R A           I+ + S        P +S Y ASK  +    + L  E G   G+
Sbjct: 137 VCREAFSLLRESDNPSIINIGSLTVEEVTMPNISAYAASKGGVASLTKALAKEWGRY-GI 195

Query: 222 TI--VTPGFIESELTQ 235
            +  + PG+  +++T+
Sbjct: 196 RVNVIAPGWYRTKMTE 211

>3asu_A Short-chain dehydrogenase/reductase SDR; SDR family, rossmann-fold, short-chain dehydrogenase/reducta ALLO-threonine dehydrogenase; 1.90A {Escherichia coli} PDB: 3asv_A* Length = 248

 Score =  147 bits (373), Expect = 9e-44
 Identities = 50/188 (26%), Positives = 93/188 (49%), Gaps = 8/188 (4%)

Query: 49  VVIITGASSGIGEHLAYEYARRGACLALCARREKSLEEVADTAREIGSPDVITIRADVSK 108
           +V++TGA++G GE +   + ++G  +    RR++ L+E+ D   E+G  ++   + DV  
Sbjct: 2   IVLVTGATAGFGECITRRFIQQGHKVIATGRRQERLQELKD---ELGD-NLYIAQLDVRN 57

Query: 109 VDDCRSLVEETMNHFGRLDHLVNNAGIS-SVALFEDIVNITDFKQIMNINFWGSVYTTRF 167
                 ++      +  +D LVNNAG++  +       ++ D++ +++ N  G VY TR 
Sbjct: 58  RAAIEEMLASLPAEWCNIDILVNNAGLALGMEPAHKA-SVEDWETMIDTNNKGLVYMTRA 116

Query: 168 AVPHLRYTK-GKIVVLSSAASWLTAPRMSFYNASKAALVLFFETLRVEL-GSDVGVTIVT 225
            +P +     G I+ + S A        + Y A+KA +  F   LR +L G+ V VT + 
Sbjct: 117 VLPGMVERNHGHIINIGSTAGSWPYAGGNVYGATKAFVRQFSLNLRTDLHGTAVRVTDIE 176

Query: 226 PGFIESEL 233
           PG +    
Sbjct: 177 PGLVGGTE 184

>2wsb_A Galactitol dehydrogenase; oxidoreductase, SDR, rossmann fold, tagatose; HET: NAD; 1.25A {Rhodobacter sphaeroides} PDB: 2wdz_A* 3lqf_A* Length = 254

 Score =  146 bits (372), Expect = 1e-43
 Identities = 53/197 (26%), Positives = 86/197 (43%), Gaps = 11/197 (5%)

Query: 44  DVSGKVVIITGASSGIGEHLAYEYARRGACLALCARREKSLEEVADTAREIGSPDVITIR 103
            + G    +TGA SGIG  +   +A  GA L L  R   +L+  A    E+G+     I 
Sbjct: 8   RLDGACAAVTGAGSGIGLEICRAFAASGARLILIDREAAALDRAAQ---ELGAAVAARIV 64

Query: 104 ADVSKVDDCRSLVEETMNHFGRLDHLVNNAGISSVALFEDIVNITDFKQIMNINFWGSVY 163
           ADV+  +   +   E       +  LVN+AGI+ +    +  +   ++Q+M +N  G  +
Sbjct: 65  ADVTDAEAMTAAAAEA-EAVAPVSILVNSAGIARLHDALE-TDDATWRQVMAVNVDGMFW 122

Query: 164 TTRFAVPH-LRYTKGKIVVLSSAASWLTAP--RMSFYNASKAALVLFFETLRVELGSDVG 220
            +R      +    G IV L S +  +       S Y ASK A+      L  E     G
Sbjct: 123 ASRAFGRAMVARGAGAIVNLGSMSGTIVNRPQFASSYMASKGAVHQLTRALAAEWAGR-G 181

Query: 221 VTI--VTPGFIESELTQ 235
           V +  + PG++ +E+T 
Sbjct: 182 VRVNALAPGYVATEMTL 198

>3sju_A Keto reductase; short-chain dehydrogenase, oxidoreductase; HET: NDP; 2.40A {Streptomyces griseoruber} Length = 279

 Score =  147 bits (372), Expect = 2e-43
 Identities = 55/200 (27%), Positives = 91/200 (45%), Gaps = 8/200 (4%)

Query: 42  SEDVSGKVVIITGASSGIGEHLAYEYARRGACLALCARREKSLEEVADTAREIGSPDVIT 101
           S     +   +TG SSGIG  +A   A RG  +  CAR  K++    D  R  G  DV  
Sbjct: 19  SHMSRPQTAFVTGVSSGIGLAVARTLAARGIAVYGCARDAKNVSAAVDGLRAAGH-DVDG 77

Query: 102 IRADVSKVDDCRSLVEETMNHFGRLDHLVNNAGISSVALFEDIVNITDFKQIMNINFWGS 161
              DV+  D+  + V   +  FG +  LVN+AG +      D+ +   +  +++ N  G 
Sbjct: 78  SSCDVTSTDEVHAAVAAAVERFGPIGILVNSAGRNGGGETADL-DDALWADVLDTNLTGV 136

Query: 162 VYTTRFAVPHLRYTK---GKIVVLSSAASWLTAPRMSFYNASKAALVLFFETLRVELGSD 218
              TR  +      +   G+IV ++S          + Y ASK  +V F +++  EL   
Sbjct: 137 FRVTREVLRAGGMREAGWGRIVNIASTGGKQGVMYAAPYTASKHGVVGFTKSVGFELAKT 196

Query: 219 VGVTI--VTPGFIESELTQG 236
            G+T+  V PG++E+ + + 
Sbjct: 197 -GITVNAVCPGYVETPMAER 215

>3r3s_A Oxidoreductase; structural genomics, csgid, center for structural genomics O infectious diseases, 3-layer(ABA) sandwich, rossmann fold; HET: NAD; 1.25A {Salmonella enterica subsp} Length = 294

 Score =  147 bits (373), Expect = 2e-43
 Identities = 54/194 (27%), Positives = 89/194 (45%), Gaps = 11/194 (5%)

Query: 47  GKVVIITGASSGIGEHLAYEYARRGACLALC--ARREKSLEEVADTAREIGSPDVITIRA 104
            +  ++TG  SGIG   A  YAR GA +A+      E+  ++V     E G    + +  
Sbjct: 49  DRKALVTGGDSGIGRAAAIAYAREGADVAINYLPAEEEDAQQVKALIEECGR-KAVLLPG 107

Query: 105 DVSKVDDCRSLVEETMNHFGRLDHLVNNAGISSVALFEDIVNITD--FKQIMNINFWGSV 162
           D+S     RSLV +     G LD L   AG        +I ++T   F+Q   +N +   
Sbjct: 108 DLSDESFARSLVHKAREALGGLDILALVAGK--QTAIPEIKDLTSEQFQQTFAVNVFALF 165

Query: 163 YTTRFAVPHLRYTKGKIVVLSSAASWLTAPRMSFYNASKAALVLFFETLRVELGSDVGVT 222
           + T+ A+P L      I+  SS  ++  +P +  Y A+KAA++ +   L  ++    G+ 
Sbjct: 166 WITQEAIPLLP-KGASIITTSSIQAYQPSPHLLDYAATKAAILNYSRGLAKQVAEK-GIR 223

Query: 223 I--VTPGFIESELT 234
           +  V PG I + L 
Sbjct: 224 VNIVAPGPIWTALQ 237

>3rih_A Short chain dehydrogenase or reductase; structural genomics, seattle structural genomics center for infectious disease, ssgcid; HET: PG5; 2.15A {Mycobacterium abscessus} Length = 293

 Score =  146 bits (372), Expect = 3e-43
 Identities = 64/200 (32%), Positives = 101/200 (50%), Gaps = 14/200 (7%)

Query: 44  DVSGKVVIITGASSGIGEHLAYEYARRGACLALCARREKSLEEVADTAREIGSPDVITIR 103
           D+S + V++TG + GIG  +A  +AR GA +A+ AR  + L  V     E+G+ +VI +R
Sbjct: 38  DLSARSVLVTGGTKGIGRGIATVFARAGANVAVAARSPRELSSVTAELGELGAGNVIGVR 97

Query: 104 ADVSKVDDCRSLVEETMNHFGRLDHLVNNAGISSVALF----EDIVNITDFKQIMNINFW 159
            DVS    C       ++ FG LD +  NAGI   A       +        +++++N  
Sbjct: 98  LDVSDPGSCADAARTVVDAFGALDVVCANAGIFPEARLDTMTPE-----QLSEVLDVNVK 152

Query: 160 GSVYTTRFAVPH-LRYTKGKIVVLSSAASWLTA-PRMSFYNASKAALVLFFETLRVELGS 217
           G+VYT +  +       +G++++ SS    +T  P  S Y ASKAA + F  T  +EL  
Sbjct: 153 GTVYTVQACLAPLTASGRGRVILTSSITGPVTGYPGWSHYGASKAAQLGFMRTAAIELAP 212

Query: 218 DVGVTI--VTPGFIESELTQ 235
             GVT+  + PG I +E   
Sbjct: 213 R-GVTVNAILPGNILTEGLV 231

>2ag5_A DHRS6, dehydrogenase/reductase (SDR family) member 6; protein-CO-factor complex, structural genomics, structural G consortium, SGC, oxidoreductase; HET: NAD; 1.84A {Homo sapiens} SCOP: c.2.1.2 Length = 246

 Score =  145 bits (368), Expect = 4e-43
 Identities = 52/195 (26%), Positives = 85/195 (43%), Gaps = 16/195 (8%)

Query: 46  SGKVVIITGASSGIGEHLAYEYARRGACLALCARREKSLEEVADTAREIGSPDVITIRAD 105
            GKV+I+T A+ GIG+  A  +AR GA +      E  L+E+         P + T   D
Sbjct: 5   DGKVIILTAAAQGIGQAAALAFAREGAKVIATDINESKLQELEK------YPGIQTRVLD 58

Query: 106 VSKVDDCRSLVEETMNHFGRLDHLVNNAGISSVALFEDIVNITDFKQIMNINFWGSVYTT 165
           V+K       +++  N   RLD L N AG        D     D+   MN+N        
Sbjct: 59  VTKKKQ----IDQFANEVERLDVLFNVAGFVHHGTVLDC-EEKDWDFSMNLNVRSMYLMI 113

Query: 166 RFAVPHLRYTK-GKIVVLSSAASWLTA-PRMSFYNASKAALVLFFETLRVELGSDVGVTI 223
           +  +P +   K G I+ +SS AS +        Y+ +KAA++   +++  +     G+  
Sbjct: 114 KAFLPKMLAQKSGNIINMSSVASSVKGVVNRCVYSTTKAAVIGLTKSVAADFIQQ-GIRC 172

Query: 224 --VTPGFIESELTQG 236
             V PG +++   Q 
Sbjct: 173 NCVCPGTVDTPSLQE 187

>3pxx_A Carveol dehydrogenase; structural genomics, seattle structural genomics center for infectious disease, ssgcid, NAD, tuberculosis; HET: NAD; 2.00A {Mycobacterium avium} Length = 287

 Score =  145 bits (368), Expect = 1e-42
 Identities = 45/217 (20%), Positives = 78/217 (35%), Gaps = 31/217 (14%)

Query: 45  VSGKVVIITGASSGIGEHLAYEYARRGACLALC------------ARREKSLEEVADTAR 92
           V  KVV++TG + G G   A + A  GA + L                 + LEE      
Sbjct: 8   VQDKVVLVTGGARGQGRSHAVKLAEEGADIILFDICHDIETNEYPLATSRDLEEAGLEVE 67

Query: 93  EIGSPDVITIRADVSKVDDCRSLVEETMNHFGRLDHLVNNAGISSVALFEDIVNITDFKQ 152
           + G     T   DV         +   +  FG+LD +V NAGI  +        +  F  
Sbjct: 68  KTGR-KAYTAEVDVRDRAAVSRELANAVAEFGKLDVVVANAGICPLGAHLP---VQAFAD 123

Query: 153 IMNINFWGSVYTTRFAVPHLRYTKGKIVVLSSAA-----------SWLTAPRMSFYNASK 201
             +++F G + T   A+P+L  +   I+   S A                P  + Y+ +K
Sbjct: 124 AFDVDFVGVINTVHAALPYLT-SGASIITTGSVAGLIAAAQPPGAGGPQGPGGAGYSYAK 182

Query: 202 AALVLFFETLRVELGSDVGVTI--VTPGFIESELTQG 236
             +  +   L  +L     +    + P  + +++   
Sbjct: 183 QLVDSYTLQLAAQLAPQ-SIRANVIHPTNVNTDMLNS 218

>2fwm_X 2,3-dihydro-2,3-dihydroxybenzoate dehydrogenase; enterobactin, rossman fold, chorismate metabolism, short-CHA oxidoreductase, tetramer; 2.00A {Escherichia coli} Length = 250

 Score =  143 bits (362), Expect = 3e-42
 Identities = 52/196 (26%), Positives = 84/196 (42%), Gaps = 16/196 (8%)

Query: 44  DVSGKVVIITGASSGIGEHLAYEYARRGACLALCARREKSLEEVADTAREIGSPDVITIR 103
           D SGK V +TGA  GIG   A  +   GA +    +     +               T  
Sbjct: 4   DFSGKNVWVTGAGKGIGYATALAFVEAGAKVTGFDQAFTQEQY-----------PFATEV 52

Query: 104 ADVSKVDDCRSLVEETMNHFGRLDHLVNNAGISSVALFEDIVNITDFKQIMNINFWGSVY 163
            DV+       + +  +    RLD LVN AGI  +   + + +  D++Q   +N  G+  
Sbjct: 53  MDVADAAQVAQVCQRLLAETERLDALVNAAGILRMGATDQL-SKEDWQQTFAVNVGGAFN 111

Query: 164 TTRFAVPH-LRYTKGKIVVLSSAASWLTAPRMSFYNASKAALVLFFETLRVELGSDVGVT 222
             +  +    R   G IV ++S A+      MS Y ASKAAL     ++ +EL    GV 
Sbjct: 112 LFQQTMNQFRRQRGGAIVTVASDAAHTPRIGMSAYGASKAALKSLALSVGLELAGS-GVR 170

Query: 223 --IVTPGFIESELTQG 236
             +V+PG  ++++ + 
Sbjct: 171 CNVVSPGSTDTDMQRT 186

>1mxh_A Pteridine reductase 2; SDR topology, protein-substrate complex, oxidoreductase; HET: NAP DHF; 2.20A {Trypanosoma cruzi} SCOP: c.2.1.2 PDB: 1mxf_A* Length = 276

 Score =  143 bits (362), Expect = 7e-42
 Identities = 37/212 (17%), Positives = 66/212 (31%), Gaps = 24/212 (11%)

Query: 42  SEDVSGKVVIITGASSGIGEHLAYEYARRGACLAL-CARREKSLEEVADTAREIGSPDVI 100
            E       +ITG +  IG  +A    ++G  + +     E + + +        +   +
Sbjct: 6   HEASECPAAVITGGARRIGHSIAVRLHQQGFRVVVHYRHSEGAAQRLVAELNAARAGSAV 65

Query: 101 TIRADVSKVDD----CRSLVEETMNHFGRLDHLVNNAGISSVALFEDIVNIT-------- 148
             + D+S        C  +++ +   FGR D LVNNA            +          
Sbjct: 66  LCKGDLSLSSSLLDCCEDIIDCSFRAFGRCDVLVNNASAYYPTPLLPGDDTNGAADAKPI 125

Query: 149 --DFKQIMNINFWGSVYTTRFAVPHLRYT------KGKIVVLSSAASWLTAPRMSFYNAS 200
                ++   N    ++  R                  +V L  A + L  P    Y  +
Sbjct: 126 DAQVAELFGSNAVAPLFLIRAFARRQGEGGAWRSRNLSVVNLCDAMTDLPLPGFCVYTMA 185

Query: 201 KAALVLFFETLRVELGSDVGVTI--VTPGFIE 230
           K AL        +EL     + +  V PG   
Sbjct: 186 KHALGGLTRAAALELAPR-HIRVNAVAPGLSL 216

>3rwb_A TPLDH, pyridoxal 4-dehydrogenase; short chain dehydrogenase/reductase, 4-pyridoxola NAD+, oxidoreductase; HET: NAD 4PL; 1.70A {Mesorhizobium loti} PDB: 3ndr_A* 3nug_A* Length = 247

 Score =  141 bits (359), Expect = 9e-42
 Identities = 57/204 (27%), Positives = 93/204 (45%), Gaps = 22/204 (10%)

Query: 42  SEDVSGKVVIITGASSGIGEHLAYEYARRGACLALCARREKSLEEVADTAREIGSPDVIT 101
           +E ++GK  ++TGA+ GIG+ +A   A  GA + +        E     A  IG      
Sbjct: 1   TERLAGKTALVTGAAQGIGKAIAARLAADGATVIVSDINA---EGAKAAAASIGK-KARA 56

Query: 102 IRADVSKVDDCRSLVEETMNHFGRLDHLVNNAGISSVALF----EDIVNITDFKQIMNIN 157
           I AD+S     ++L  E     G +D LVNNA I     +     D      +++I+++N
Sbjct: 57  IAADISDPGSVKALFAEIQALTGGIDILVNNASIVPFVAWDDVDLD-----HWRKIIDVN 111

Query: 158 FWGSVYTTRFAVPH----LRYTKGKIVVLSSAASWLTAPRMSFYNASKAALVLFFETLRV 213
             G+   TR          +   G+++ ++S   +   P M+ Y A+K  ++ F   L  
Sbjct: 112 LTGTFIVTRAGTDQMRAAGKA--GRVISIASNTFFAGTPNMAAYVAAKGGVIGFTRALAT 169

Query: 214 ELGSDVGVTI--VTPGFIESELTQ 235
           ELG    +T   VTPG IES+  +
Sbjct: 170 ELGKY-NITANAVTPGLIESDGVK 192

>4da9_A Short-chain dehydrogenase/reductase; structural genomics, protein structure initiative, PSI-biology; 2.50A {Sinorhizobium meliloti} Length = 280

 Score =  142 bits (361), Expect = 1e-41
 Identities = 57/201 (28%), Positives = 103/201 (51%), Gaps = 12/201 (5%)

Query: 43  EDVSGKVVIITGASSGIGEHLAYEYARRGACLALC-ARREKSLEEVADTAREIGSPDVIT 101
              +  V I+TG   GIG  +A   A  G  +A+      + +  V      +G+  VI 
Sbjct: 25  TQKARPVAIVTGGRRGIGLGIARALAASGFDIAITGIGDAEGVAPVIAELSGLGA-RVIF 83

Query: 102 IRADVSKVDDCRSLVEETMNHFGRLDHLVNNAGISSVALFEDIVNIT--DFKQIMNINFW 159
           +RAD++ +   ++ V+  +  FGR+D LVNNAGI+S+   +D +++   +F  I+ +N  
Sbjct: 84  LRADLADLSSHQATVDAVVAEFGRIDCLVNNAGIASIVR-DDFLDLKPENFDTIVGVNLR 142

Query: 160 GSVYTTRFAVPHLRYTK----GKIVVLSSAASWLTAPRMSFYNASKAALVLFFETLRVEL 215
           G+V+ T+  +  +  +       I+ ++S ++ +T+P    Y  SKA L  F + L + L
Sbjct: 143 GTVFFTQAVLKAMLASDARASRSIINITSVSAVMTSPERLDYCMSKAGLAAFSQGLALRL 202

Query: 216 GSDVGVTI--VTPGFIESELT 234
               G+ +  V PG I S++T
Sbjct: 203 AET-GIAVFEVRPGIIRSDMT 222

>3s55_A Putative short-chain dehydrogenase/reductase; structural genomics, seattle structural genomics center for infectious disease, ssgcid; HET: NAD; 2.10A {Mycobacterium abscessus} Length = 281

 Score =  142 bits (360), Expect = 1e-41
 Identities = 52/209 (24%), Positives = 89/209 (42%), Gaps = 20/209 (9%)

Query: 44  DVSGKVVIITGASSGIGEHLAYEYARRGA---CLALCARREK------SLEEVADTAREI 94
           D  GK  +ITG + G+G   A   A  GA       C   +       + +++A+T   +
Sbjct: 7   DFEGKTALITGGARGMGRSHAVALAEAGADIAICDRCENSDVVGYPLATADDLAETVALV 66

Query: 95  GSPD--VITIRADVSKVDDCRSLVEETMNHFGRLDHLVNNAGISSVALFEDIVNITDFKQ 152
                  I+ + DV       S V E  +  G +D  + NAGIS++AL  ++     + +
Sbjct: 67  EKTGRRCISAKVDVKDRAALESFVAEAEDTLGGIDIAITNAGISTIALLPEV-ESAQWDE 125

Query: 153 IMNINFWGSVYTTRFAVPHL---RYTKGKIVVLSSAASWLTAPRMSFYNASKAALVLFFE 209
           ++  N  G+  T     P +    Y  G+IV +SS          + Y +SK  ++   +
Sbjct: 126 VIGTNLTGTFNTIAAVAPGMIKRNY--GRIVTVSSMLGHSANFAQASYVSSKWGVIGLTK 183

Query: 210 TLRVELGSDVGVTI--VTPGFIESELTQG 236
               +L    G+T+  V PG IE+ +T  
Sbjct: 184 CAAHDLVGY-GITVNAVAPGNIETPMTHN 211

>1ooe_A Dihydropteridine reductase; structural genomics, PSI, protein structure initiative, southeast collaboratory for structural genomics; HET: MES; 1.65A {Caenorhabditis elegans} SCOP: c.2.1.2 Length = 236

 Score =  139 bits (353), Expect = 6e-41
 Identities = 31/194 (15%), Positives = 73/194 (37%), Gaps = 17/194 (8%)

Query: 46  SGKVVIITGASSGIGEHLAYEYARRGACLALCARREKSLEEVADTAREIGSPDVITIRAD 105
           S   VI+ G    +G  +   + + G  +           + AD+         I +  +
Sbjct: 2   SSGKVIVYGGKGALGSAILEFFKKNGYTVLNIDLSA---NDQADSN--------ILVDGN 50

Query: 106 VSKVDDCRSLVEETMN--HFGRLDHLVNNAGISSVALFEDIVNITDFKQIMNINFWGSVY 163
            +  +  +S++E+T +     ++D +   AG  +         + +   ++  + W S  
Sbjct: 51  KNWTEQEQSILEQTASSLQGSQVDGVFCVAGGWAGGSASSKDFVKNADLMIKQSVWSSAI 110

Query: 164 TTRFAVPHLRYTKGKIVVLSSAASWLTAPRMSFYNASKAALVLFFETLRVELGS-DVGVT 222
             + A  HL+   G + +  +AA+    P M  Y  +KAA+     +L  +         
Sbjct: 111 AAKLATTHLK-PGGLLQLTGAAAAMGPTPSMIGYGMAKAAVHHLTSSLAAKDSGLPDNSA 169

Query: 223 I--VTPGFIESELT 234
           +  + P  +++ + 
Sbjct: 170 VLTIMPVTLDTPMN 183

>2x9g_A PTR1, pteridine reductase; short chain dehydrogenase, oxidoreductase; HET: NAP LYA; 1.10A {Trypanosoma brucei brucei} PDB: 2x9n_A* 2x9v_A* 3bmc_A* 3bmd_A* 3bme_A* 3bmf_A* 3bmg_A* 3bmh_A* 3bmi_A* 3bmj_A* 3bmk_A* 3bml_A* 3bmm_A* 3bmn_A* 3bmo_A* 3bmq_A* 3bmr_A* 3gn1_A* 3gn2_A* 3jq6_A* ... Length = 288

 Score =  140 bits (354), Expect = 1e-40
 Identities = 43/212 (20%), Positives = 72/212 (33%), Gaps = 24/212 (11%)

Query: 42  SEDVSGKVVIITGASSGIGEHLAYEYARRGACLAL-CARREKSLEEVADTAREIGSPDVI 100
              +     ++TGA+  IG  +A +  + G  + +      ++   +AD   +  S   +
Sbjct: 18  GSHMEAPAAVVTGAAKRIGRAIAVKLHQTGYRVVIHYHNSAEAAVSLADELNKERSNTAV 77

Query: 101 TIRADVSKVD----DCRSLVEETMNHFGRLDHLVNNAGISSVALFEDI---------VNI 147
             +AD++  +     C  ++      FGR D LVNNA                       
Sbjct: 78  VCQADLTNSNVLPASCEEIINSCFRAFGRCDVLVNNASAFYPTPLVQGDHEDNSNGKTVE 137

Query: 148 TDFKQIMNINFWGSVYTTRFAVPHLRYT-------KGKIVVLSSAASWLTAPRMSFYNAS 200
           T   +++  N       T       + T          IV L  A         S YN  
Sbjct: 138 TQVAELIGTNAIAPFLLTMSFAQRQKGTNPNCTSSNLSIVNLCDAMVDQPCMAFSLYNMG 197

Query: 201 KAALVLFFETLRVELGSDVGVTI--VTPGFIE 230
           K ALV   ++  +EL    G+ +  V PG   
Sbjct: 198 KHALVGLTQSAALELAPY-GIRVNGVAPGVSL 228

>1zmt_A Haloalcohol dehalogenase HHEC; halohydrin dehalogenase, epoxide catalysis, enantioselectivity, lyase; HET: RNO; 1.70A {Agrobacterium tumefaciens} SCOP: c.2.1.2 PDB: 1pwz_A 1px0_A* 1pwx_A* 1zo8_A* Length = 254

 Score =  139 bits (352), Expect = 1e-40
 Identities = 32/204 (15%), Positives = 69/204 (33%), Gaps = 13/204 (6%)

Query: 48  KVVIITGASSGIGEHLAYEYARRGACLALCARREKSLEEVADTAREIGSPDVITIRADVS 107
              I+T      G   A   +  G  +A      K  +E+   A           +    
Sbjct: 2   STAIVTNVKHFGGMGSALRLSEAGHTVACHDESFKQKDELEAFAETY-------PQLKPM 54

Query: 108 KVDDCRSLVEETMNHFGRLDHLVNNAGIS-SVALFEDIVNITDFKQIMNINFWGSVYTTR 166
              +   L+E   + +G++D LV+N   +      +    + D++  +            
Sbjct: 55  SEQEPAELIEAVTSAYGQVDVLVSNDIFAPEFQPIDK-YAVEDYRGAVEALQIRPFALVN 113

Query: 167 FAVPH-LRYTKGKIVVLSSAASWLTAPRMSFYNASKAALVLFFETLRVELGSDVGVTI-- 223
                  +   G I+ ++SA  +     +S Y +++A        L  ELG    + +  
Sbjct: 114 AVASQMKKRKSGHIIFITSATPFGPWKELSTYTSARAGACTLANALSKELGEY-NIPVFA 172

Query: 224 VTPGFIESELTQGKFLTGRRQNSD 247
           + P ++ SE +   + T   + + 
Sbjct: 173 IGPNYLHSEDSPYFYPTEPWKTNP 196

>2rhc_B Actinorhodin polyketide ketoreductase; oxidoreductase, combinatorial biosynthesis, short chain dehydrogenase/reductase; HET: NAP EMO; 2.10A {Streptomyces coelicolor} SCOP: c.2.1.2 PDB: 2rh4_A* 1w4z_A* 3csd_B* 3qrw_A* 3ri3_B* 2rhr_B* 1x7g_A* 1x7h_A* 1xr3_A* Length = 277

 Score =  139 bits (353), Expect = 1e-40
 Identities = 54/198 (27%), Positives = 90/198 (45%), Gaps = 8/198 (4%)

Query: 44  DVSGKVVIITGASSGIGEHLAYEYARRGACLALCARREKSLEEVADTAREIGSPDVITIR 103
               +V ++TGA+SGIG  +A    + G  + +CAR E+ L       RE G  +     
Sbjct: 19  TQDSEVALVTGATSGIGLEIARRLGKEGLRVFVCARGEEGLRTTLKELREAGV-EADGRT 77

Query: 104 ADVSKVDDCRSLVEETMNHFGRLDHLVNNAGISSVALFEDIVNITDFKQIMNINFWGSVY 163
            DV  V +  +LV   +  +G +D LVNNAG        ++     +  ++  N  G   
Sbjct: 78  CDVRSVPEIEALVAAVVERYGPVDVLVNNAGRPGGGATAEL-ADELWLDVVETNLTGVFR 136

Query: 164 TTRFAVPHLRYTK---GKIVVLSSAASWLTAPRMSFYNASKAALVLFFETLRVELGSDVG 220
            T+  +      +   G+IV ++S          + Y+ASK  +V F + L +EL    G
Sbjct: 137 VTKQVLKAGGMLERGTGRIVNIASTGGKQGVVHAAPYSASKHGVVGFTKALGLELART-G 195

Query: 221 VTI--VTPGFIESELTQG 236
           +T+  V PGF+E+ +   
Sbjct: 196 ITVNAVCPGFVETPMAAS 213

>1jtv_A 17 beta-hydroxysteroid dehydrogenase type 1; steroid hormones, alternative binding mode, oxidoreductase; HET: TES; 1.54A {Homo sapiens} SCOP: c.2.1.2 PDB: 1dht_A* 1equ_A* 1bhs_A* 1i5r_A* 1qyv_A* 1qyw_A* 1qyx_A* 3dey_X* 3dhe_A* 3hb4_X* 3hb5_X* 3klp_X* 3km0_A* 1iol_A* 1fds_A* 1fdt_A* 3klm_X* 1fdw_A* 1fdu_A* 1fdv_A* ... Length = 327

 Score =  140 bits (356), Expect = 2e-40
 Identities = 52/194 (26%), Positives = 88/194 (45%), Gaps = 10/194 (5%)

Query: 46  SGKVVIITGASSGIGEHLAYEYAR---RGACLALCARREKSLEEVADTAREIGSPD--VI 100
           +  VV+ITG SSGIG HLA   A    +   +    R  K+   + + AR +  P   + 
Sbjct: 1   ARTVVLITGCSSGIGLHLAVRLASDPSQSFKVYATLRDLKTQGRLWEAARALACPPGSLE 60

Query: 101 TIRADVSKVDDCRSLVEETMNHFGRLDHLVNNAGISSVALFEDIVNITDFKQIMNINFWG 160
           T++ DV       +  E      GR+D LV NAG+  +   E  +       ++++N  G
Sbjct: 61  TLQLDVRDSKSVAAARERV--TEGRVDVLVCNAGLGLLGPLEA-LGEDAVASVLDVNVVG 117

Query: 161 SVYTTRFAVPHLRYTK-GKIVVLSSAASWLTAPRMSFYNASKAALVLFFETLRVEL-GSD 218
           +V   +  +P ++    G+++V  S    +  P    Y ASK AL    E+L V L    
Sbjct: 118 TVRMLQAFLPDMKRRGSGRVLVTGSVGGLMGLPFNDVYCASKFALEGLCESLAVLLLPFG 177

Query: 219 VGVTIVTPGFIESE 232
           V ++++  G + + 
Sbjct: 178 VHLSLIECGPVHTA 191

>3ijr_A Oxidoreductase, short chain dehydrogenase/reducta; structural genomics, infectious D center for structural genomics of infectious diseases; HET: NAD; 2.05A {Bacillus anthracis str} PDB: 3i3o_A* Length = 291

 Score =  139 bits (352), Expect = 3e-40
 Identities = 54/197 (27%), Positives = 91/197 (46%), Gaps = 10/197 (5%)

Query: 47  GKVVIITGASSGIGEHLAYEYARRGACLALC-ARREKSLEEVADTAREIGSPDVITIRAD 105
           GK V+ITG  SGIG  ++  +A+ GA +A+     E    E      + G    + +  D
Sbjct: 47  GKNVLITGGDSGIGRAVSIAFAKEGANIAIAYLDEEGDANETKQYVEKEGV-KCVLLPGD 105

Query: 106 VSKVDDCRSLVEETMNHFGRLDHLVNNAGISSVALFEDIVNITD--FKQIMNINFWGSVY 163
           +S    C+ +V+ET+   G L+ LVNN         + +  IT    ++   IN +   +
Sbjct: 106 LSDEQHCKDIVQETVRQLGSLNILVNNVAQQYPQ--QGLEYITAEQLEKTFRINIFSYFH 163

Query: 164 TTRFAVPHLRYTKGKIVVLSSAASWLTAPRMSFYNASKAALVLFFETLRVELGSDVGVTI 223
            T+ A+ HL+     I+  +S  ++     +  Y+A+K A+V F  +L   L    G+ +
Sbjct: 164 VTKAALSHLK-QGDVIINTASIVAYEGNETLIDYSATKGAIVAFTRSLSQSLVQK-GIRV 221

Query: 224 --VTPGFIESELTQGKF 238
             V PG I + L    F
Sbjct: 222 NGVAPGPIWTPLIPSSF 238

>3d7l_A LIN1944 protein; APC89317, structural genomics, PS protein structure initiative, midwest center for structural genomics, MCSG; 2.06A {Listeria innocua} Length = 202

 Score =  135 bits (343), Expect = 5e-40
 Identities = 25/190 (13%), Positives = 68/190 (35%), Gaps = 25/190 (13%)

Query: 46  SGKVVIITGASSGIGEHLAYEYARRGACLALCARREKSLEEVADTAREIGSPDVITIRAD 105
           +   +++ GAS  +G  +     ++               EV    R  G      +  D
Sbjct: 2   NAMKILLIGASGTLGSAVKERLEKKA--------------EVITAGRHSG-----DVTVD 42

Query: 106 VSKVDDCRSLVEETMNHFGRLDHLVNNAGISSVALFEDIVNITDFKQIMNINFWGSVYTT 165
           ++ +D  + + E+     G++D +V+  G ++ +   ++         ++    G +   
Sbjct: 43  ITNIDSIKKMYEQ----VGKVDAIVSATGSATFSPLTEL-TPEKNAVTISSKLGGQINLV 97

Query: 166 RFAVPHLRYTKGKIVVLSSAASWLTAPRMSFYNASKAALVLFFETLRVELGSDVGVTIVT 225
              +  L   KG   + +         + +    +  A+  F ++  +E+   + +  V+
Sbjct: 98  LLGIDSLN-DKGSFTLTTGIMMEDPIVQGASAAMANGAVTAFAKSAAIEMPRGIRINTVS 156

Query: 226 PGFIESELTQ 235
           P  +E    +
Sbjct: 157 PNVLEESWDK 166

>3uf0_A Short-chain dehydrogenase/reductase SDR; gluconate, gluconate 5-dehydratase, NAD(P) dependent, enzyme initiative, EFI, oxidoreductase; HET: NAP; 2.00A {Beutenbergia cavernae} Length = 273

 Score =  137 bits (347), Expect = 1e-39
 Identities = 56/195 (28%), Positives = 102/195 (52%), Gaps = 8/195 (4%)

Query: 44  DVSGKVVIITGASSGIGEHLAYEYARRGACLALCARREKSLEEVADTAREIGSPDVITIR 103
            ++G+  ++TGA SGIG  +A+ YAR GA +    R +  ++EVAD   + G      + 
Sbjct: 28  SLAGRTAVVTGAGSGIGRAIAHGYARAGAHVLAWGRTDG-VKEVADEIADGGG-SAEAVV 85

Query: 104 ADVSKVDDCRSLVEETMNHFGRLDHLVNNAGISSVALFEDIVNITDFKQIMNINFWGSVY 163
           AD++ ++   ++  E +    R+D LVNNAGI + A  E+ V++  +++++ +N   +  
Sbjct: 86  ADLADLEGAANVA-EELAATRRVDVLVNNAGIIARAPAEE-VSLGRWREVLTVNLDAAWV 143

Query: 164 TTRFAVPH-LRYTKGKIVVLSSAASWLTAPRMSFYNASKAALVLFFETLRVELGSDVGVT 222
            +R      L +  G+IV ++S  S+     ++ Y ASK A+V     L  E     GV 
Sbjct: 144 LSRSFGTAMLAHGSGRIVTIASMLSFQGGRNVAAYAASKHAVVGLTRALASEWAGR-GVG 202

Query: 223 I--VTPGFIESELTQ 235
           +  + PG++ +  T 
Sbjct: 203 VNALAPGYVVTANTA 217

>1dhr_A Dihydropteridine reductase; oxidoreductase(acting on NADH or NADPH); HET: NAD; 2.30A {Rattus norvegicus} SCOP: c.2.1.2 PDB: 1dir_A* 1hdr_A* Length = 241

 Score =  133 bits (336), Expect = 2e-38
 Identities = 30/197 (15%), Positives = 67/197 (34%), Gaps = 13/197 (6%)

Query: 42  SEDVSGKVVIITGASSGIGEHLAYEYARRGACLALCARREKSLEEVADTAREIGSPDVIT 101
           +     + V++ G    +G      +  R   +A     E    E A  +  +   D  T
Sbjct: 2   AASGEARRVLVYGGRGALGSRCVQAFRARNWWVASIDVVE---NEEASASVIVKMTDSFT 58

Query: 102 IRADVSKVDDCRSLVEETMNHFGRLDHLVNNAGISSVALFEDIVNITDFKQIMNINFWGS 161
            +AD              +    ++D ++  AG  +    +      +   +   + W S
Sbjct: 59  EQADQVTA------EVGKLLGDQKVDAILCVAGGWAGGNAKSKSLFKNCDLMWKQSIWTS 112

Query: 162 VYTTRFAVPHLRYTKGKIVVLSSAASWLTAPRMSFYNASKAALVLFFETLRVELGS---D 218
             ++  A  HL+   G + +  + A+    P M  Y  +K A+    ++L  +       
Sbjct: 113 TISSHLATKHLK-EGGLLTLAGAKAALDGTPGMIGYGMAKGAVHQLCQSLAGKNSGMPSG 171

Query: 219 VGVTIVTPGFIESELTQ 235
                V P  +++ + +
Sbjct: 172 AAAIAVLPVTLDTPMNR 188

>3ftp_A 3-oxoacyl-[acyl-carrier protein] reductase; ssgcid, 3-ketoacyl-(acyl-carrier- protein) reductase, oxidoreductase, structural genomics; 2.05A {Burkholderia pseudomallei} Length = 270

 Score =  133 bits (336), Expect = 4e-38
 Identities = 60/201 (29%), Positives = 99/201 (49%), Gaps = 14/201 (6%)

Query: 42  SEDVSGKVVIITGASSGIGEHLAYEYARRGACLALCARREKSLEEVADTAREIGSPDVIT 101
            + +  +V I+TGAS GIG  +A E ARRGA +   A  E   E +    ++ G  +   
Sbjct: 23  DKTLDKQVAIVTGASRGIGRAIALELARRGAMVIGTATTEAGAEGIGAAFKQAGL-EGRG 81

Query: 102 IRADVSKVDDCRSLVEETMNHFGRLDHLVNNAGISSVALF----EDIVNITDFKQIMNIN 157
              +V+      +LVE T+  FG L+ LVNNAGI+   L     +D     ++  +++ N
Sbjct: 82  AVLNVNDATAVDALVESTLKEFGALNVLVNNAGITQDQLAMRMKDD-----EWDAVIDTN 136

Query: 158 FWGSVYTTRFAVPH-LRYTKGKIVVLSSAASWLTAPRMSFYNASKAALVLFFETLRVELG 216
                  +R  +   ++   G+IV ++S       P    Y A+KA +      L  E+G
Sbjct: 137 LKAVFRLSRAVLRPMMKARGGRIVNITSVVGSAGNPGQVNYAAAKAGVAGMTRALAREIG 196

Query: 217 SDVGVTI--VTPGFIESELTQ 235
           S  G+T+  V PGFI++++T+
Sbjct: 197 SR-GITVNCVAPGFIDTDMTK 216

>3lyl_A 3-oxoacyl-(acyl-carrier-protein) reductase; alpha and beta protein, NAD(P)-binding rossmann fold, csgid, oxidoreductase; 1.95A {Francisella tularensis subsp} Length = 247

 Score =  132 bits (334), Expect = 5e-38
 Identities = 53/198 (26%), Positives = 99/198 (50%), Gaps = 14/198 (7%)

Query: 44  DVSGKVVIITGASSGIGEHLAYEYARRGACLALCARREKSLEEVADTAREIGSPDVITIR 103
            ++ KV ++TGAS GIG  +A+  A +GA +   A  + S E+  ++ +E G      + 
Sbjct: 2   SLNEKVALVTGASRGIGFEVAHALASKGATVVGTATSQASAEKFENSMKEKGF-KARGLV 60

Query: 104 ADVSKVDDCRSLVEETMNHFGRLDHLVNNAGISSVALF----EDIVNITDFKQIMNINFW 159
            ++S ++  ++   E       +D LVNNAGI+   L     ED     +++ ++N N  
Sbjct: 61  LNISDIESIQNFFAEIKAENLAIDILVNNAGITRDNLMMRMSED-----EWQSVINTNLS 115

Query: 160 GSVYTTRFAVPH-LRYTKGKIVVLSSAASWLTAPRMSFYNASKAALVLFFETLRVELGSD 218
                ++  V   ++   G+I+ + S       P  + Y A+KA ++ F ++L  E+ S 
Sbjct: 116 SIFRMSKECVRGMMKKRWGRIISIGSVVGSAGNPGQTNYCAAKAGVIGFSKSLAYEVASR 175

Query: 219 VGVTI--VTPGFIESELT 234
             +T+  V PGFI +++T
Sbjct: 176 -NITVNVVAPGFIATDMT 192

>2ekp_A 2-deoxy-D-gluconate 3-dehydrogenase; structural genomics, NPPSFA, nation project on protein structural and functional analyses; HET: NAD; 1.15A {Thermus thermophilus} PDB: 1x1e_A* 2ekq_A Length = 239

 Score =  131 bits (333), Expect = 6e-38
 Identities = 42/193 (21%), Positives = 87/193 (45%), Gaps = 17/193 (8%)

Query: 48  KVVIITGASSGIGEHLAYEYARRGACLALCARREKSLEEVADTAREIGSPDVITIRADVS 107
           +  ++TG S GIG  +A     RG  +A+ +R     EE A +   +       +  D+ 
Sbjct: 3   RKALVTGGSRGIGRAIAEALVARGYRVAIASRNP---EEAAQSLGAVP------LPTDLE 53

Query: 108 KVDDCRSLVEETMNHFGRLDHLVNNAGISSVALFEDIVNITDFKQIMNINFWGSVYTTRF 167
           K DD + LV+  +   G L  LV+ A ++      + ++  ++++++ ++   +    + 
Sbjct: 54  K-DDPKGLVKRALEALGGLHVLVHAAAVNVRKPALE-LSYEEWRRVLYLHLDVAFLLAQA 111

Query: 168 AVPH-LRYTKGKIVVLSSAASWLTA--PRMSFYNASKAALVLFFETLRVELGSDVGVTI- 223
           A PH      G+++ + S  ++       +  Y  +K AL+     L  E     G+ + 
Sbjct: 112 AAPHMAEAGWGRVLFIGSVTTFTAGGPVPIPAYTTAKTALLGLTRALAKEWARL-GIRVN 170

Query: 224 -VTPGFIESELTQ 235
            + PG++E+E T 
Sbjct: 171 LLCPGYVETEFTL 183

>1uls_A Putative 3-oxoacyl-acyl carrier protein reductase; structural genomics, riken structural genomics/proteomics initiative, RSGI; 2.40A {Thermus thermophilus} SCOP: c.2.1.2 Length = 245

 Score =  131 bits (333), Expect = 7e-38
 Identities = 57/197 (28%), Positives = 86/197 (43%), Gaps = 20/197 (10%)

Query: 46  SGKVVIITGASSGIGEHLAYEYARRGACLALCARREKSLEEVADTAREIGSPDVITIRAD 105
             K V+ITGA+ GIG      +A+ GA L  C   E  L E A+            +  D
Sbjct: 4   KDKAVLITGAAHGIGRATLELFAKEGARLVACDIEEGPLREAAEAVGAHP------VVMD 57

Query: 106 VSKVDDCRSLVEETMNHFGRLDHLVNNAGISSVALF----EDIVNITDFKQIMNINFWGS 161
           V+          E + H GRLD +V+ AGI+          +     D++ ++ +N  GS
Sbjct: 58  VADPASVERGFAEALAHLGRLDGVVHYAGITRDNFHWKMPLE-----DWELVLRVNLTGS 112

Query: 162 VYTTRFAVPH-LRYTKGKIVVLSSAASWLTAPRMSFYNASKAALVLFFETLRVELGSDVG 220
               + A         G IV+ +S   +L     + Y AS A +V    TL +ELG   G
Sbjct: 113 FLVAKAASEAMREKNPGSIVLTAS-RVYLGNLGQANYAASMAGVVGLTRTLALELGRW-G 170

Query: 221 VTI--VTPGFIESELTQ 235
           + +  + PGFIE+ +T 
Sbjct: 171 IRVNTLAPGFIETRMTA 187

>2qhx_A Pteridine reductase 1; oxidoreductase, short-chain dehydrogenase/reductase, trypanosomatid, pterin salvage, drug resistance; HET: NAP FE1; 2.61A {Leishmania major} SCOP: c.2.1.2 Length = 328

 Score =  134 bits (338), Expect = 7e-38
 Identities = 42/225 (18%), Positives = 68/225 (30%), Gaps = 41/225 (18%)

Query: 46  SGKVVIITGASSGIGEHLAYEYARRGACLAL-CARREKSLEEVADTAREIGSPDVITIRA 104
           +  V ++TGA+  +G  +A      G  + L   R       ++ T         IT++A
Sbjct: 45  TVPVALVTGAAKRLGRSIAEGLHAEGYAVCLHYHRSAAEANALSATLNARRPNSAITVQA 104

Query: 105 DVSKVDD-----------------CRSLVEETMNHFGRLDHLVNNAGISSVALFEDI--- 144
           D+S V                   C  LV     H+GR D LVNNA              
Sbjct: 105 DLSNVATAPVSGADGSAPVTLFTRCAELVAACYTHWGRCDVLVNNASSFYPTPLLRNDED 164

Query: 145 ----------VNITDFKQIMNINFWGSVYTTRFAVPHLRYTK-------GKIVVLSSAAS 187
                        T    +   N     +  +     +  T          I+ +  A +
Sbjct: 165 GHEPCVGDREAMETATADLFGSNAIAPYFLIKAFAHRVAGTPAKHRGTNYSIINMVDAMT 224

Query: 188 WLTAPRMSFYNASKAALVLFFETLRVELGSDVGVTI--VTPGFIE 230
                  + Y  +K AL     +  +EL     + +  V PG   
Sbjct: 225 NQPLLGYTIYTMAKGALEGLTRSAALELAPL-QIRVNGVGPGLSV 268

>1e7w_A Pteridine reductase; dihydrofolate reductase, shortchain dehydrogenase, methotrexate resistance, oxidoreductase; HET: NDP MTX; 1.75A {Leishmania major} SCOP: c.2.1.2 PDB: 1w0c_A* 1e92_A* 2bf7_A* 2bfa_A* 2bfm_A* 2bfo_A* 2bfp_A* 2p8k_A* 3h4v_A* 2xox_A 1p33_A* Length = 291

 Score =  132 bits (334), Expect = 1e-37
 Identities = 42/225 (18%), Positives = 68/225 (30%), Gaps = 41/225 (18%)

Query: 46  SGKVVIITGASSGIGEHLAYEYARRGACLAL-CARREKSLEEVADTAREIGSPDVITIRA 104
           +  V ++TGA+  +G  +A      G  + L   R       ++ T         IT++A
Sbjct: 8   TVPVALVTGAAKRLGRSIAEGLHAEGYAVCLHYHRSAAEANALSATLNARRPNSAITVQA 67

Query: 105 DVSKVDD-----------------CRSLVEETMNHFGRLDHLVNNAGISSVALFEDI--- 144
           D+S V                   C  LV     H+GR D LVNNA              
Sbjct: 68  DLSNVATAPVSGADGSAPVTLFTRCAELVAACYTHWGRCDVLVNNASSFYPTPLLRNDED 127

Query: 145 ----------VNITDFKQIMNINFWGSVYTTRFAVPHLRYTK-------GKIVVLSSAAS 187
                        T    +   N     +  +     +  T          I+ +  A +
Sbjct: 128 GHEPCVGDREAMETATADLFGSNAIAPYFLIKAFAHRVAGTPAKHRGTNYSIINMVDAMT 187

Query: 188 WLTAPRMSFYNASKAALVLFFETLRVELGSDVGVTI--VTPGFIE 230
                  + Y  +K AL     +  +EL     + +  V PG   
Sbjct: 188 NQPLLGYTIYTMAKGALEGLTRSAALELAPL-QIRVNGVGPGLSV 231

>2c07_A 3-oxoacyl-(acyl-carrier protein) reductase; oxidoreductase, FABG, short-chain alcohol reductase, fatty acid biosynthesis, apicoplast; 1.5A {Plasmodium falciparum} SCOP: c.2.1.2 Length = 285

 Score =  131 bits (332), Expect = 2e-37
 Identities = 54/199 (27%), Positives = 95/199 (47%), Gaps = 14/199 (7%)

Query: 44  DVSGKVVIITGASSGIGEHLAYEYARRGACLALCARREKSLEEVADTAREIGSPDVITIR 103
               KV ++TGA  GIG  +A   A+  + +   +R +KS + V D  +  G  +     
Sbjct: 41  CGENKVALVTGAGRGIGREIAKMLAKSVSHVICISRTQKSCDSVVDEIKSFGY-ESSGYA 99

Query: 104 ADVSKVDDCRSLVEETMNHFGRLDHLVNNAGISSVALF----EDIVNITDFKQIMNINFW 159
            DVSK ++   ++ + +     +D LVNNAGI+   LF     D     +++ ++  N  
Sbjct: 100 GDVSKKEEISEVINKILTEHKNVDILVNNAGITRDNLFLRMKND-----EWEDVLRTNLN 154

Query: 160 GSVYTTRFAVPH-LRYTKGKIVVLSSAASWLTAPRMSFYNASKAALVLFFETLRVELGSD 218
              Y T+      +    G+I+ +SS          + Y++SKA ++ F ++L  EL S 
Sbjct: 155 SLFYITQPISKRMINNRYGRIINISSIVGLTGNVGQANYSSSKAGVIGFTKSLAKELASR 214

Query: 219 VGVTI--VTPGFIESELTQ 235
             +T+  + PGFI S++T 
Sbjct: 215 -NITVNAIAPGFISSDMTD 232

>3op4_A 3-oxoacyl-[acyl-carrier protein] reductase; 3-ketoacyl-(acyl-carrier-protein) reductase; HET: MSE NAP; 1.60A {Vibrio cholerae o1 biovar el tor} PDB: 3rsh_A* 3rro_A* 3tzk_A 3tzc_A* 3u09_A 3tzh_A 1q7b_A* 1i01_A* 1q7c_A* 2cf2_E Length = 248

 Score =  128 bits (325), Expect = 1e-36
 Identities = 55/199 (27%), Positives = 104/199 (52%), Gaps = 17/199 (8%)

Query: 44  DVSGKVVIITGASSGIGEHLAYEYARRGACLALCARREKSLEEVADTAREIGSPDVITIR 103
           ++ GKV ++TGAS GIG+ +A   A RGA +   A  E   + ++D    +G  +   + 
Sbjct: 6   NLEGKVALVTGASRGIGKAIAELLAERGAKVIGTATSESGAQAISD---YLGD-NGKGMA 61

Query: 104 ADVSKVDDCRSLVEETMNHFGRLDHLVNNAGISSVALF----EDIVNITDFKQIMNINFW 159
            +V+  +   ++++   + FG +D LVNNAGI+   L     E+     ++  IM  N  
Sbjct: 62  LNVTNPESIEAVLKAITDEFGGVDILVNNAGITRDNLLMRMKEE-----EWSDIMETNLT 116

Query: 160 GSVYTTRFAVPH-LRYTKGKIVVLSSAASWLTAPRMSFYNASKAALVLFFETLRVELGSD 218
                ++  +   ++  +G+I+ + S    +     + Y A+KA ++ F +++  E+ S 
Sbjct: 117 SIFRLSKAVLRGMMKKRQGRIINVGSVVGTMGNAGQANYAAAKAGVIGFTKSMAREVASR 176

Query: 219 VGVTI--VTPGFIESELTQ 235
            GVT+  V PGFIE+++T+
Sbjct: 177 -GVTVNTVAPGFIETDMTK 194

>4dmm_A 3-oxoacyl-[acyl-carrier-protein] reductase; rossmann fold, oxoacyl-ACP reductase, NADP binding, fatty AC biosynthsis, oxidoreductase; HET: NAP; 2.38A {Synechococcus elongatus} PDB: 4dml_A* Length = 269

 Score =  129 bits (326), Expect = 1e-36
 Identities = 61/199 (30%), Positives = 106/199 (53%), Gaps = 15/199 (7%)

Query: 44  DVSGKVVIITGASSGIGEHLAYEYARRGACLALC-ARREKSLEEVADTAREIGSPDVITI 102
            ++ ++ ++TGAS GIG  +A E A  GA +A+  A    + +EV       G  +   +
Sbjct: 25  PLTDRIALVTGASRGIGRAIALELAAAGAKVAVNYASSAGAADEVVAAIAAAGG-EAFAV 83

Query: 103 RADVSKVDDCRSLVEETMNHFGRLDHLVNNAGISSVALF----EDIVNITDFKQIMNINF 158
           +ADVS+  +  +L    +  +GRLD LVNNAGI+   L      D     D++ ++++N 
Sbjct: 84  KADVSQESEVEALFAAVIERWGRLDVLVNNAGITRDTLLLRMKRD-----DWQSVLDLNL 138

Query: 159 WGSVYTTRFAVPH-LRYTKGKIVVLSSAASWLTAPRMSFYNASKAALVLFFETLRVELGS 217
            G    +R A    L+   G+I+ ++S    +  P  + Y+A+KA ++   +T+  EL S
Sbjct: 139 GGVFLCSRAAAKIMLKQRSGRIINIASVVGEMGNPGQANYSAAKAGVIGLTKTVAKELAS 198

Query: 218 DVGVTI--VTPGFIESELT 234
             G+T+  V PGFI +++T
Sbjct: 199 R-GITVNAVAPGFIATDMT 216

>3grp_A 3-oxoacyl-(acyl carrierprotein) reductase; structural genomics, oxidoreductase, S structural genomics center for infectious disease, ssgcid; 2.09A {Bartonella henselae} PDB: 3enn_A 3emk_A Length = 266

 Score =  128 bits (324), Expect = 2e-36
 Identities = 59/199 (29%), Positives = 101/199 (50%), Gaps = 17/199 (8%)

Query: 44  DVSGKVVIITGASSGIGEHLAYEYARRGACLALCARREKSLEEVADTAREIGSPDVITIR 103
            ++G+  ++TGA+ GIGE +A  +  +GA + L   RE  L+E+A    ++G  DV    
Sbjct: 24  KLTGRKALVTGATGGIGEAIARCFHAQGAIVGLHGTREDKLKEIAA---DLGK-DVFVFS 79

Query: 104 ADVSKVDDCRSLVEETMNHFGRLDHLVNNAGISSVALF----EDIVNITDFKQIMNINFW 159
           A++S     + L E        +D LVNNAGI+   LF    +      D+  ++ +N  
Sbjct: 80  ANLSDRKSIKQLAEVAEREMEGIDILVNNAGITRDGLFVRMQDQ-----DWDDVLAVNLT 134

Query: 160 GSVYTTRFAVPH-LRYTKGKIVVLSSAASWLTAPRMSFYNASKAALVLFFETLRVELGSD 218
            +   TR  +   +R   G+I+ ++S    +  P  + Y A+KA L+ F + L  E+ S 
Sbjct: 135 AASTLTRELIHSMMRRRYGRIINITSIVGVVGNPGQTNYCAAKAGLIGFSKALAQEIASR 194

Query: 219 VGVTI--VTPGFIESELTQ 235
             +T+  + PGFI+S +T 
Sbjct: 195 -NITVNCIAPGFIKSAMTD 212

>2hq1_A Glucose/ribitol dehydrogenase; CTH-1438, structural genomics, southeast collaboratory for structural genomics, secsg, PSI; 1.90A {Clostridium thermocellum} Length = 247

 Score =  127 bits (322), Expect = 3e-36
 Identities = 59/199 (29%), Positives = 103/199 (51%), Gaps = 15/199 (7%)

Query: 44  DVSGKVVIITGASSGIGEHLAYEYARRGACLAL-CARREKSLEEVADTAREIGSPDVITI 102
            + GK  I+TG+S G+G+ +A++    GA + L  +    SL+  A+  +  G  +V+  
Sbjct: 2   QLKGKTAIVTGSSRGLGKAIAWKLGNMGANIVLNGSPASTSLDATAEEFKAAGI-NVVVA 60

Query: 103 RADVSKVDDCRSLVEETMNHFGRLDHLVNNAGISSVALF----EDIVNITDFKQIMNINF 158
           + DV   +D  ++V+  M+ FGR+D LVNNAGI+   L     E      D+  ++N N 
Sbjct: 61  KGDVKNPEDVENMVKTAMDAFGRIDILVNNAGITRDTLMLKMSEK-----DWDDVLNTNL 115

Query: 159 WGSVYTTRFAVPH-LRYTKGKIVVLSSAASWLTAPRMSFYNASKAALVLFFETLRVELGS 217
             +   T+      L+   GKI+ ++S A  +     + Y ASKA L+ F +++  E  +
Sbjct: 116 KSAYLCTKAVSKIMLKQKSGKIINITSIAGIIGNAGQANYAASKAGLIGFTKSIAKEFAA 175

Query: 218 DVGVTI--VTPGFIESELT 234
             G+    V PG I++++T
Sbjct: 176 K-GIYCNAVAPGIIKTDMT 193

>3i4f_A 3-oxoacyl-[acyl-carrier protein] reductase; structural genomics, 3-oxoacyl-reductase, PSI-2; 2.39A {Bacillus thuringiensis serovar kurstakorganism_taxid} Length = 264

 Score =  127 bits (322), Expect = 4e-36
 Identities = 47/211 (22%), Positives = 92/211 (43%), Gaps = 29/211 (13%)

Query: 42  SEDVSGKVVIITGASSGIGEHLAYEYARRGACLALCARREKSL-EEVADTAREIGSPDVI 100
           S     +  +IT  + G+G+ +  +   +G  + +    + +  E + +T +++    + 
Sbjct: 2   SLGRFVRHALITAGTKGLGKQVTEKLLAKGYSVTVTYHSDTTAMETMKETYKDVEE-RLQ 60

Query: 101 TIRADVSKVDDCRSLVEETMNHFGRLDHLVNNAGISSVALFEDIVNIT-----------D 149
            ++ADV+K +D   +VEE M+HFG++D L+NNAG            +            +
Sbjct: 61  FVQADVTKKEDLHKIVEEAMSHFGKIDFLINNAGPY----------VFERKKLVDYEEDE 110

Query: 150 FKQIMNINFWGSVYTTRFAVPH-LRYTKGKIVVLS--SAASWLTAPRMSFYNASKAALVL 206
           + +++  N     +  +  VP   +   G+I+      A S       S + A+K  LV 
Sbjct: 111 WNEMIQGNLTAVFHLLKLVVPVMRKQNFGRIINYGFQGADSAPGWIYRSAFAAAKVGLVS 170

Query: 207 FFETLRVELGSDVGVTI--VTPGFIESELTQ 235
             +T+  E     G+T   V PG I  E+ +
Sbjct: 171 LTKTVAYEEAEY-GITANMVCPGDIIGEMKE 200

>2pnf_A 3-oxoacyl-[acyl-carrier-protein] reductase; short chain oxidoreductase, rossmann fold, oxidoreductase; HET: 1PE MES; 1.80A {Aquifex aeolicus} PDB: 2p68_A* Length = 248

 Score =  127 bits (321), Expect = 5e-36
 Identities = 51/199 (25%), Positives = 94/199 (47%), Gaps = 13/199 (6%)

Query: 44  DVSGKVVIITGASSGIGEHLAYEYARRGACLALCARREKSLEEVADTAREIGSPDVITIR 103
            + GKV ++TG++ GIG  +A + A  G+ + +     +  + VA+            + 
Sbjct: 4   KLQGKVSLVTGSTRGIGRAIAEKLASAGSTVIITGTSGERAKAVAEEIANKYGVKAHGVE 63

Query: 104 ADVSKVDDCRSLVEETMNHFGRLDHLVNNAGISSVALF----EDIVNITDFKQIMNINFW 159
            ++   +      EE  N    +D LVNNAGI+   LF           D+++++ +N  
Sbjct: 64  MNLLSEESINKAFEEIYNLVDGIDILVNNAGITRDKLFLRMSLL-----DWEEVLKVNLT 118

Query: 160 GSVYTTRFAVPH-LRYTKGKIVVLSSAASWLTAPRMSFYNASKAALVLFFETLRVELGSD 218
           G+   T+ ++   ++   G+IV +SS   +        Y+ +KA L+ F ++L  EL   
Sbjct: 119 GTFLVTQNSLRKMIKQRWGRIVNISSVVGFTGNVGQVNYSTTKAGLIGFTKSLAKELAPR 178

Query: 219 VGVTI--VTPGFIESELTQ 235
             V +  V PGFIE+++T 
Sbjct: 179 -NVLVNAVAPGFIETDMTA 196

>1o5i_A 3-oxoacyl-(acyl carrier protein) reductase; TM1169, structur genomics, JCSG, PSI, protein structure initiative, joint CE structural genomics; HET: NAD; 2.50A {Thermotoga maritima} SCOP: c.2.1.2 Length = 249

 Score =  127 bits (321), Expect = 5e-36
 Identities = 48/196 (24%), Positives = 88/196 (44%), Gaps = 21/196 (10%)

Query: 44  DVSGKVVIITGASSGIGEHLAYEYARRGACLALCARREKSLEEVADTAREIGSPDVITIR 103
            +  K V++  AS GIG  +A   ++ GA + +CAR E+ L+                + 
Sbjct: 16  GIRDKGVLVLAASRGIGRAVADVLSQEGAEVTICARNEELLKRSGHRY----------VV 65

Query: 104 ADVSKVDDCRSLVEETMNHFGRLDHLVNNAGISSVALFEDIVNITDFKQIMNINFWGSVY 163
            D+ K       ++        +D LV NAG      F++ +   DFK+ ++  F   + 
Sbjct: 66  CDLRK------DLDLLFEKVKEVDILVLNAGGPKAGFFDE-LTNEDFKEAIDSLFLNMIK 118

Query: 164 TTRFAVPHLRYTK-GKIVVLSSAASWLTAPRMSFYNASKAALVLFFETLRVELGSDVGVT 222
             R  +P ++    G+IV ++S +       +   N+++ AL  F +TL  E+    G+T
Sbjct: 119 IVRNYLPAMKEKGWGRIVAITSFSVISPIENLYTSNSARMALTGFLKTLSFEVAPY-GIT 177

Query: 223 I--VTPGFIESELTQG 236
           +  V PG+ E+E  + 
Sbjct: 178 VNCVAPGWTETERVKE 193

>2uvd_A 3-oxoacyl-(acyl-carrier-protein) reductase; beta-ketoacyl- (acyl carrier protein) reductase, short-chain dehydrogenase/reductase (SDR); 2.4A {Bacillus anthracis} Length = 246

 Score =  126 bits (319), Expect = 8e-36
 Identities = 65/198 (32%), Positives = 111/198 (56%), Gaps = 15/198 (7%)

Query: 46  SGKVVIITGASSGIGEHLAYEYARRGACLALC-ARREKSLEEVADTAREIGSPDVITIRA 104
            GKV ++TGAS GIG  +A + A++GA + +  A  E+   EV D  +++GS D I +RA
Sbjct: 3   KGKVALVTGASRGIGRAIAIDLAKQGANVVVNYAGNEQKANEVVDEIKKLGS-DAIAVRA 61

Query: 105 DVSKVDDCRSLVEETMNHFGRLDHLVNNAGISSVALF----EDIVNITDFKQIMNINFWG 160
           DV+  +D  ++V++T++ FG++D LVNNAG++   L     E+     ++  ++N N  G
Sbjct: 62  DVANAEDVTNMVKQTVDVFGQVDILVNNAGVTKDNLLMRMKEE-----EWDTVINTNLKG 116

Query: 161 SVYTTRFAVPH-LRYTKGKIVVLSSAASWLTAPRMSFYNASKAALVLFFETLRVELGSDV 219
               T+      +R   G+IV ++S       P  + Y A+KA ++   +T   EL S  
Sbjct: 117 VFLCTKAVSRFMMRQRHGRIVNIASVVGVTGNPGQANYVAAKAGVIGLTKTSAKELASR- 175

Query: 220 GVTI--VTPGFIESELTQ 235
            +T+  + PGFI +++T 
Sbjct: 176 NITVNAIAPGFIATDMTD 193

>3osu_A 3-oxoacyl-[acyl-carrier-protein] reductase; structural genomics, csgid, center for structural genomics O infectious diseases; 1.90A {Staphylococcus aureus subsp} PDB: 3sj7_A* Length = 246

 Score =  126 bits (318), Expect = 1e-35
 Identities = 63/198 (31%), Positives = 103/198 (52%), Gaps = 15/198 (7%)

Query: 46  SGKVVIITGASSGIGEHLAYEYARRGACLALC-ARREKSLEEVADTAREIGSPDVITIRA 104
             K  ++TGAS GIG  +A + A  G  +A+  A  ++  E V +  +  G  D   I+A
Sbjct: 3   MTKSALVTGASRGIGRSIALQLAEEGYNVAVNYAGSKEKAEAVVEEIKAKGV-DSFAIQA 61

Query: 105 DVSKVDDCRSLVEETMNHFGRLDHLVNNAGISSVALF----EDIVNITDFKQIMNINFWG 160
           +V+  D+ +++++E ++ FG LD LVNNAGI+   L     E      ++  +++ N  G
Sbjct: 62  NVADADEVKAMIKEVVSQFGSLDVLVNNAGITRDNLLMRMKEQ-----EWDDVIDTNLKG 116

Query: 161 SVYTTRFAVPH-LRYTKGKIVVLSSAASWLTAPRMSFYNASKAALVLFFETLRVELGSDV 219
                + A P  LR   G I+ LSS    +  P  + Y A+KA ++   ++   EL S  
Sbjct: 117 VFNCIQKATPQMLRQRSGAIINLSSVVGAVGNPGQANYVATKAGVIGLTKSAARELASR- 175

Query: 220 GVTI--VTPGFIESELTQ 235
           G+T+  V PGFI S++T 
Sbjct: 176 GITVNAVAPGFIVSDMTD 193

>2pd6_A Estradiol 17-beta-dehydrogenase 8; short-chain dehydrogenase/reductase, steroid metabolism, LIP metabolism, structural genomics; HET: NAD; 2.00A {Homo sapiens} Length = 264

 Score =  126 bits (318), Expect = 2e-35
 Identities = 56/209 (26%), Positives = 91/209 (43%), Gaps = 21/209 (10%)

Query: 42  SEDVSGKVVIITGASSGIGEHLAYEYARRGACLALCARREKSLEEVADTAREIG------ 95
              +   + ++TGA SGIG  ++   A  GA +A C     + +E        G      
Sbjct: 2   QNRLRSALALVTGAGSGIGRAVSVRLAGEGATVAACDLDRAAAQETVRLLGGPGSKEGPP 61

Query: 96  SPDVITIRADVSKVDDCRSLVEETMNHFGR-LDHLVNNAGISSVALF----EDIVNITDF 150
             +    +ADVS+    R L+E+    F R    +V+ AGI+         ED     D+
Sbjct: 62  RGNHAAFQADVSEARAARCLLEQVQACFSRPPSVVVSCAGITQDEFLLHMSED-----DW 116

Query: 151 KQIMNINFWGSVYTTRFAVPHL--RYTKGKIVVLSSAASWLTAPRMSFYNASKAALVLFF 208
            +++ +N  G+   T+ A   L     +G I+ +SS    +     + Y ASKA ++   
Sbjct: 117 DKVIAVNLKGTFLVTQAAAQALVSNGCRGSIINISSIVGKVGNVGQTNYAASKAGVIGLT 176

Query: 209 ETLRVELGSDVGVTI--VTPGFIESELTQ 235
           +T   ELG   G+    V PGFI + +TQ
Sbjct: 177 QTAARELGRH-GIRCNSVLPGFIATPMTQ 204

>2ph3_A 3-oxoacyl-[acyl carrier protein] reductase; TTHA0415, structural genomics, southea collaboratory for structural genomics, secsg; 1.91A {Thermus thermophilus HB8} Length = 245

 Score =  125 bits (316), Expect = 3e-35
 Identities = 68/196 (34%), Positives = 102/196 (52%), Gaps = 14/196 (7%)

Query: 48  KVVIITGASSGIGEHLAYEYARRGACLALC-ARREKSLEEVADTAREIGSPDVITIRADV 106
           +  +ITGAS GIG  +A   A  G  LA+   +  +  EEVA+ AR  GSP V  + A++
Sbjct: 2   RKALITGASRGIGRAIALRLAEDGFALAIHYGQNREKAEEVAEEARRRGSPLVAVLGANL 61

Query: 107 SKVDDCRSLVEETMNHFGRLDHLVNNAGISSVALF----EDIVNITDFKQIMNINFWGSV 162
            + +   +LV +     G LD LVNNAGI+   L     ++     D++ ++  N     
Sbjct: 62  LEAEAATALVHQAAEVLGGLDTLVNNAGITRDTLLVRMKDE-----DWEAVLEANLSAVF 116

Query: 163 YTTRFAVPH-LRYTKGKIVVLSSAASWLTAPRMSFYNASKAALVLFFETLRVELGSDVGV 221
            TTR AV   ++   G+IV ++S    L  P  + Y ASKA L+ F   +  E     G+
Sbjct: 117 RTTREAVKLMMKARFGRIVNITSVVGILGNPGQANYVASKAGLIGFTRAVAKEYAQR-GI 175

Query: 222 TI--VTPGFIESELTQ 235
           T+  V PGFIE+E+T+
Sbjct: 176 TVNAVAPGFIETEMTE 191

>1edo_A Beta-keto acyl carrier protein reductase; nucleotide fold, rossmann fold, oxidoreductase; HET: NAP; 2.30A {Brassica napus} SCOP: c.2.1.2 PDB: 2cdh_G Length = 244

 Score =  124 bits (314), Expect = 4e-35
 Identities = 57/195 (29%), Positives = 100/195 (51%), Gaps = 15/195 (7%)

Query: 48  KVVIITGASSGIGEHLAYEYARRGACLALC-ARREKSLEEVADTAREIGSPDVITIRADV 106
            VV++TGAS GIG+ +A    + G  + +  AR  K+ EEV+      G    IT   DV
Sbjct: 2   PVVVVTGASRGIGKAIALSLGKAGCKVLVNYARSAKAAEEVSKQIEAYGG-QAITFGGDV 60

Query: 107 SKVDDCRSLVEETMNHFGRLDHLVNNAGISSVALF----EDIVNITDFKQIMNINFWGSV 162
           SK  D  ++++  ++ +G +D +VNNAGI+   L     +       + +++++N  G  
Sbjct: 61  SKEADVEAMMKTAIDAWGTIDVVVNNAGITRDTLLIRMKKS-----QWDEVIDLNLTGVF 115

Query: 163 YTTRFAVPH-LRYTKGKIVVLSSAASWLTAPRMSFYNASKAALVLFFETLRVELGSDVGV 221
             T+ A    ++  KG+I+ ++S    +     + Y A+KA ++ F +T   E  S   +
Sbjct: 116 LCTQAATKIMMKKRKGRIINIASVVGLIGNIGQANYAAAKAGVIGFSKTAAREGASR-NI 174

Query: 222 TI--VTPGFIESELT 234
            +  V PGFI S++T
Sbjct: 175 NVNVVCPGFIASDMT 189

>3tpc_A Short chain alcohol dehydrogenase-related dehydro; structural genomics, PSI-biology, NEW YORK structural genomi research consortium; 2.34A {Sinorhizobium meliloti} Length = 257

 Score =  122 bits (309), Expect = 3e-34
 Identities = 51/205 (24%), Positives = 84/205 (40%), Gaps = 17/205 (8%)

Query: 44  DVSGKVVIITGASSGIGEHLAYEYARRGACLALCARREKSLEEVADTAREIGSPDVITIR 103
            +  +V I+TGASSG+G  +    A+ GA +     +  + EE A    E+G+  V    
Sbjct: 4   QLKSRVFIVTGASSGLGAAVTRMLAQEGATVLGLDLKPPAGEEPAA---ELGA-AVRFRN 59

Query: 104 ADVSKVDDCRSLVEETMNHFGRLDHLVNNAGISSVALF---EDIVNITDFKQIMNINFWG 160
           ADV+   D  + +      FG +  LVN AG +             +  F + + +N  G
Sbjct: 60  ADVTNEADATAALAFAKQEFGHVHGLVNCAGTAPGEKILGRSGPHALDSFARTVAVNLIG 119

Query: 161 SVYTTRFAVPHLRYTK-------GKIVVLSSAASWLTAPRMSFYNASKAALVLFFETLRV 213
           +    R A   +   +       G IV  +S A++      + Y ASK  +         
Sbjct: 120 TFNMIRLAAEVMSQGEPDADGERGVIVNTASIAAFDGQIGQAAYAASKGGVAALTLPAAR 179

Query: 214 ELGSDVGVTIVT--PGFIESELTQG 236
           EL    G+ +VT  PG  ++ +  G
Sbjct: 180 ELARF-GIRVVTIAPGIFDTPMMAG 203

>3ppi_A 3-hydroxyacyl-COA dehydrogenase type-2; ssgcid, dehydrogenas mycobacterium avium, structural genomics; 2.00A {Mycobacterium avium} Length = 281

 Score =  122 bits (308), Expect = 6e-34
 Identities = 33/206 (16%), Positives = 75/206 (36%), Gaps = 18/206 (8%)

Query: 44  DVSGKVVIITGASSGIGEHLAYEYARRGACLALCARREKSLEEVADTAREIGSPDVITIR 103
              G   I++G + G+GE         G  + +     +  + +AD   E+G      + 
Sbjct: 27  QFEGASAIVSGGAGGLGEATVRRLHADGLGVVIADLAAEKGKALAD---ELG-NRAEFVS 82

Query: 104 ADVSKVDDCRSLVEETMNHFGRLDHLVNNAGISSVALFED----IVNITDFKQIMNINFW 159
            +V+  D   + +E           +V + G               ++  F + +++   
Sbjct: 83  TNVTSEDSVLAAIEAANQLGRLRYAVVAHGGFGVAQRIVQRDGSPADMGGFTKTIDLYLN 142

Query: 160 GSVYTTRFAVPHLRYT-------KGKIVVLSSAASWLTAPRMSFYNASKAALVLFFETLR 212
           G+    R     +          +G +V+ +S A +      + Y A+KA ++       
Sbjct: 143 GTYNVARLVAASIAAAEPRENGERGALVLTASIAGYEGQIGQTAYAAAKAGVIGLTIAAA 202

Query: 213 VELGSDVGVTIVT--PGFIESELTQG 236
            +L S  G+ + T  PG +++ + + 
Sbjct: 203 RDLSSA-GIRVNTIAPGTMKTPIMES 227

>2dkn_A 3-alpha-hydroxysteroid dehydrogenase; oxidoreductase, rossmann fold; HET: NAI; 1.80A {Pseudomonas SP} Length = 255

 Score =  121 bits (306), Expect = 8e-34
 Identities = 36/198 (18%), Positives = 63/198 (31%), Gaps = 15/198 (7%)

Query: 48  KVVIITGASSGIGEHLAYEYARRGACLALCARREKSLEEVADTAREIGSPDVITIRADVS 107
            V+ ITG++SGIG  L    AR G  +    R +    ++       G  +   + A + 
Sbjct: 2   SVIAITGSASGIGAALKELLARAGHTVIGIDRGQ---ADIEADLSTPGGRETA-VAAVLD 57

Query: 108 KVDD-----CRSLVEETMNHFGRLDHLVNNAGISSV--ALFEDIVNITDFKQIMNINFWG 160
           +                      L   VN  G+S++   L E +         + +    
Sbjct: 58  RCGGVLDGLVCCAGVGVTAANSGLVVAVNYFGVSALLDGLAEALSR-GQQPAAVIVGSIA 116

Query: 161 SVYTTRFAVPHLRYTKGKIVVLSSAASWLTAPRMSFYNASKAALVLFFETLRVELGSDVG 220
           +       +P +          +   +         Y  SK A+        V+     G
Sbjct: 117 ATQPGAAELPMVEAMLAGDEARAIELAEQQGQTHLAYAGSKYAVTCLARRNVVDWAGR-G 175

Query: 221 VTI--VTPGFIESELTQG 236
           V +  V PG +E+ L Q 
Sbjct: 176 VRLNVVAPGAVETPLLQA 193

>3f9i_A 3-oxoacyl-[acyl-carrier-protein] reductase; 3-ketoacyl-(acyl-carrier-protein) reductase, FAT biosynthesis, lipid synthesis, NADP; 2.25A {Rickettsia prowazekii} Length = 249

 Score =  121 bits (305), Expect = 1e-33
 Identities = 56/198 (28%), Positives = 102/198 (51%), Gaps = 21/198 (10%)

Query: 44  DVSGKVVIITGASSGIGEHLAYEYARRGACLALCARREKSLEEVADTAREIGSPDVITIR 103
           D++GK  +ITGASSGIG  +A    + G+ + +    E+ L+ + +    +   +     
Sbjct: 11  DLTGKTSLITGASSGIGSAIARLLHKLGSKVIISGSNEEKLKSLGN---ALKD-NYTIEV 66

Query: 104 ADVSKVDDCRSLVEETMNHFGRLDHLVNNAGISSVALF----EDIVNITDFKQIMNINFW 159
            +++  ++C +L+ +       LD LV NAGI+S  L     +      DF ++++IN  
Sbjct: 67  CNLANKEECSNLISK----TSNLDILVCNAGITSDTLAIRMKDQ-----DFDKVIDINLK 117

Query: 160 GSVYTTRFAVPH-LRYTKGKIVVLSSAASWLTAPRMSFYNASKAALVLFFETLRVELGSD 218
            +    R A+   ++   G+I+ +SS       P  + Y ASKA L+   ++L  E+ + 
Sbjct: 118 ANFILNREAIKKMIQKRYGRIINISSIVGIAGNPGQANYCASKAGLIGMTKSLSYEVATR 177

Query: 219 VGVTI--VTPGFIESELT 234
            G+T+  V PGFI+S++T
Sbjct: 178 -GITVNAVAPGFIKSDMT 194

>2o23_A HADH2 protein; HSD17B10, schad, ERAB, type II HADH, 2-methyl-3-hydroxybuTyr dehydrogenase, MHBD, structural genomics, structural genomi consortium; HET: NAD GOL; 1.20A {Homo sapiens} SCOP: c.2.1.2 PDB: 1so8_A 1u7t_A* 1e3s_A* 1e3w_B* 1e3w_A* 1e6w_A* Length = 265

 Score =  120 bits (302), Expect = 3e-33
 Identities = 49/207 (23%), Positives = 90/207 (43%), Gaps = 19/207 (9%)

Query: 44  DVSGKVVIITGASSGIGEHLAYEYARRGACLALCARREKSLEEVADTAREIGSPDVITIR 103
            V G V +ITG +SG+G   A     +GA   L        E  A    ++G+ + +   
Sbjct: 9   SVKGLVAVITGGASGLGLATAERLVGQGASAVLLDLPNSGGEAQAK---KLGN-NCVFAP 64

Query: 104 ADVSKVDDCRSLVEETMNHFGRLDHLVNNAGISSVALFEDI-----VNITDFKQIMNINF 158
           ADV+   D ++ +      FGR+D  VN AGI+  +   ++       + DF++++++N 
Sbjct: 65  ADVTSEKDVQTALALAKGKFGRVDVAVNCAGIAVASKTYNLKKGQTHTLEDFQRVLDVNL 124

Query: 159 WGSVYTTRFAVPHLRYT-------KGKIVVLSSAASWLTAPRMSFYNASKAALVLFFETL 211
            G+    R     +          +G I+  +S A++      + Y+ASK  +V     +
Sbjct: 125 MGTFNVIRLVAGEMGQNEPDQGGQRGVIINTASVAAFEGQVGQAAYSASKGGIVGMTLPI 184

Query: 212 RVELGSDVGVTIVT--PGFIESELTQG 236
             +L    G+ ++T  PG   + L   
Sbjct: 185 ARDLAPI-GIRVMTIAPGLFGTPLLTS 210

>3gk3_A Acetoacetyl-COA reductase; acetoacetyl-CO reductase, oxidoreductase, structural genomics; 2.10A {Burkholderia pseudomallei 1710B} Length = 269

 Score =  119 bits (302), Expect = 4e-33
 Identities = 46/197 (23%), Positives = 87/197 (44%), Gaps = 15/197 (7%)

Query: 46  SGKVVIITGASSGIGEHLAYEYARRGACLAL-CARREKSLEEVADTAREIGSPDVITIRA 104
           + +V  +TG   G+G  ++      G  +A+  + R   +       R+ G  D      
Sbjct: 24  AKRVAFVTGGMGGLGAAISRRLHDAGMAVAVSHSERNDHVSTWLMHERDAGR-DFKAYAV 82

Query: 105 DVSKVDDCRSLVEETMNHFGRLDHLVNNAGISSVALF----EDIVNITDFKQIMNINFWG 160
           DV+  + C    E+ +  FG++D L+NNAGI+  A F    +      D+  +M  +   
Sbjct: 83  DVADFESCERCAEKVLADFGKVDVLINNAGITRDATFMKMTKG-----DWDAVMRTDLDA 137

Query: 161 SVYTTRFAVPH-LRYTKGKIVVLSSAASWLTAPRMSFYNASKAALVLFFETLRVELGSDV 219
               T+  +   +    G+IV + S      A   + Y ++KA +  F +TL +E     
Sbjct: 138 MFNVTKQFIAGMVERRFGRIVNIGSVNGSRGAFGQANYASAKAGIHGFTKTLALETAKR- 196

Query: 220 GVTI--VTPGFIESELT 234
           G+T+  V+PG++ + + 
Sbjct: 197 GITVNTVSPGYLATAMV 213

>2nm0_A Probable 3-oxacyl-(acyl-carrier-protein) reductas; oxidoreductase; 1.99A {Streptomyces coelicolor} Length = 253

 Score =  118 bits (299), Expect = 8e-33
 Identities = 53/205 (25%), Positives = 95/205 (46%), Gaps = 25/205 (12%)

Query: 38  NSIFSEDVSGKVVIITGASSGIGEHLAYEYARRGACLALCARREKSLEEVADTAREIGSP 97
           + +       + V++TG + GIG  +A  +A  G  +A+  R  +  E            
Sbjct: 12  SGLVPRSHMSRSVLVTGGNRGIGLAIARAFADAGDKVAITYRSGEPPEGF---------- 61

Query: 98  DVITIRADVSKVDDCRSLVEETMNHFGRLDHLVNNAGISSVALF----EDIVNITDFKQI 153
             + ++ D++  +      +E     G ++ L+ NAG++   L     E+     DF  +
Sbjct: 62  --LAVKCDITDTEQVEQAYKEIEETHGPVEVLIANAGVTKDQLLMRMSEE-----DFTSV 114

Query: 154 MNINFWGSVYTTRFAVPH-LRYTKGKIVVLSSAASWLTAPRMSFYNASKAALVLFFETLR 212
           +  N  G+    + A    LR  KG++V++SS    L +   + Y ASKA LV F  +L 
Sbjct: 115 VETNLTGTFRVVKRANRAMLRAKKGRVVLISSVVGLLGSAGQANYAASKAGLVGFARSLA 174

Query: 213 VELGSDVGVTI--VTPGFIESELTQ 235
            ELGS   +T   V PGF+++++T+
Sbjct: 175 RELGSR-NITFNVVAPGFVDTDMTK 198

>3ezl_A Acetoacetyl-COA reductase; ssgcid, acetyacetyl-COA reductase, oxidoreductase, structural genomics; HET: P4C; 2.25A {Burkholderia pseudomallei 1710B} Length = 256

 Score =  118 bits (298), Expect = 1e-32
 Identities = 42/197 (21%), Positives = 84/197 (42%), Gaps = 15/197 (7%)

Query: 46  SGKVVIITGASSGIGEHLAYEYARRGACLAL-CARREKSLEEVADTAREIGSPDVITIRA 104
           S ++  +TG   GIG  +     + G  +   C        +  +  + +G  D      
Sbjct: 12  SQRIAYVTGGMGGIGTSICQRLHKDGFRVVAGCGPNSPRRVKWLEDQKALGF-DFYASEG 70

Query: 105 DVSKVDDCRSLVEETMNHFGRLDHLVNNAGISSVALF----EDIVNITDFKQIMNINFWG 160
           +V   D  +   ++     G +D LVNNAGI+   +F     +     D++ +++ N   
Sbjct: 71  NVGDWDSTKQAFDKVKAEVGEIDVLVNNAGITRDVVFRKMTRE-----DWQAVIDTNLTS 125

Query: 161 SVYTTRFAVPH-LRYTKGKIVVLSSAASWLTAPRMSFYNASKAALVLFFETLRVELGSDV 219
               T+  +   +    G+I+ +SS          + Y+ +KA +  F  +L  E+ +  
Sbjct: 126 LFNVTKQVIDGMVERGWGRIINISSVNGQKGQFGQTNYSTAKAGIHGFTMSLAQEVATK- 184

Query: 220 GVTI--VTPGFIESELT 234
           GVT+  V+PG+I +++ 
Sbjct: 185 GVTVNTVSPGYIGTDMV 201

>1uzm_A 3-oxoacyl-[acyl-carrier protein] reductase; beta-ketoacyl reductase, oxidoreductase; 1.49A {Mycobacterium tuberculosis} SCOP: c.2.1.2 PDB: 1uzn_A* 2ntn_A 1uzl_A Length = 247

 Score =  117 bits (295), Expect = 3e-32
 Identities = 46/201 (22%), Positives = 86/201 (42%), Gaps = 25/201 (12%)

Query: 42  SEDVSGKVVIITGASSGIGEHLAYEYARRGACLALCARREKSLEEVADTAREIGSPDVIT 101
                 + V++TG + GIG  +A   A  G  +A+  R   + + +              
Sbjct: 10  KPPFVSRSVLVTGGNRGIGLAIAQRLAADGHKVAVTHRGSGAPKGL------------FG 57

Query: 102 IRADVSKVDDCRSLVEETMNHFGRLDHLVNNAGISSVALF----EDIVNITDFKQIMNIN 157
           +  DV+  D           H G ++ LV+NAG+S+ A      E+      F++++N N
Sbjct: 58  VEVDVTDSDAVDRAFTAVEEHQGPVEVLVSNAGLSADAFLMRMTEE-----KFEKVINAN 112

Query: 158 FWGSVYTTRFAVPH-LRYTKGKIVVLSSAASWLTAPRMSFYNASKAALVLFFETLRVELG 216
             G+    + A     R   G+++ + S +        + Y ASKA ++    ++  EL 
Sbjct: 113 LTGAFRVAQRASRSMQRNKFGRMIFIGSVSGLWGIGNQANYAASKAGVIGMARSIARELS 172

Query: 217 SDVGVTI--VTPGFIESELTQ 235
               VT   V PG+I++++T+
Sbjct: 173 KA-NVTANVVAPGYIDTDMTR 192

>1gz6_A Estradiol 17 beta-dehydrogenase 4; 17BETA-HSD4, MFE-2, beta-oxidation, peroxisome, SDR, steroid biosynthesis, oxidoreductase, NADP; HET: NAI; 2.38A {Rattus norvegicus} SCOP: c.2.1.2 PDB: 1zbq_A* Length = 319

 Score =  117 bits (295), Expect = 1e-31
 Identities = 55/206 (26%), Positives = 93/206 (45%), Gaps = 17/206 (8%)

Query: 44  DVSGKVVIITGASSGIGEHLAYEYARRGA---------CLALCARREKSLEEVADTAREI 94
              G+VV++TGA  G+G   A  +A RGA               +   + ++V +  R  
Sbjct: 6   RFDGRVVLVTGAGGGLGRAYALAFAERGALVVVNDLGGDFKGVGKGSSAADKVVEEIRRR 65

Query: 95  GSPDVITIRADVSKVDDCRSLVEETMNHFGRLDHLVNNAGISSVALFEDIVNITDFKQIM 154
           G   V    A+   V+    LV+  ++ FGR+D +VNNAGI     F  I +  D+  I 
Sbjct: 66  GGKAV----ANYDSVEAGEKLVKTALDTFGRIDVVVNNAGILRDRSFSRI-SDEDWDIIQ 120

Query: 155 NINFWGSVYTTRFAVPHLR-YTKGKIVVLSSAASWLTAPRMSFYNASKAALVLFFETLRV 213
            ++  GS   TR A  H++    G+I++ +SA+        + Y+A+K  L+    TL +
Sbjct: 121 RVHLRGSFQVTRAAWDHMKKQNYGRIIMTASASGIYGNFGQANYSAAKLGLLGLANTLVI 180

Query: 214 ELGS-DVGVTIVTPGFIESELTQGKF 238
           E    ++    + P    S +T+   
Sbjct: 181 EGRKNNIHCNTIAPNAG-SRMTETVM 205

>3qlj_A Short chain dehydrogenase; structural genomics, seattle structural genomics center for infectious disease, ssgcid, tuberculosis; 1.80A {Mycobacterium avium} Length = 322

 Score =  117 bits (294), Expect = 1e-31
 Identities = 54/210 (25%), Positives = 86/210 (40%), Gaps = 25/210 (11%)

Query: 47  GKVVIITGASSGIGEHLAYEYARRGA----------CLALCARREKSLEEVADTAREIGS 96
           G+VVI+TGA  GIG   A  +A  GA               A    + + V D     G 
Sbjct: 27  GRVVIVTGAGGGIGRAHALAFAAEGARVVVNDIGVGLDGSPASGGSAAQSVVDEITAAGG 86

Query: 97  PDVITIRADVSKVDDCRSLVEETMNHFGRLDHLVNNAGISSVALFEDIVNIT--DFKQIM 154
            + +   ++V+  D    L++  +  FG LD LVNNAGI    +     N +  +F  ++
Sbjct: 87  -EAVADGSNVADWDQAAGLIQTAVETFGGLDVLVNNAGIVRDRMI---ANTSEEEFDAVI 142

Query: 155 NINFWGSVYTTRFAVPHLRYTK-------GKIVVLSSAASWLTAPRMSFYNASKAALVLF 207
            ++  G   T R A  + R          G+I+  SS A    +     Y+A+KA +   
Sbjct: 143 AVHLKGHFATMRHAAAYWRGLSKAGKAVDGRIINTSSGAGLQGSVGQGNYSAAKAGIATL 202

Query: 208 FETLRVELGS-DVGVTIVTPGFIESELTQG 236
                 E+G   V V  + P    + +T+ 
Sbjct: 203 TLVGAAEMGRYGVTVNAIAPS-ARTRMTET 231

>1fjh_A 3alpha-hydroxysteroid dehydrogenase/carbonyl reductase; short chain dehydrogenase, SDR, xenobiotic, metyrapone, oligomerisation; 1.68A {Comamonas testosteroni} SCOP: c.2.1.2 PDB: 1fk8_A* Length = 257

 Score =  115 bits (290), Expect = 2e-31
 Identities = 42/229 (18%), Positives = 73/229 (31%), Gaps = 59/229 (25%)

Query: 48  KVVIITGASSGIGEHLAYEYARRGACLALCARREKSLEEVADTAREIGSPDVITIRADVS 107
            +++I+G ++GIG          G  +     R+    EV                AD+S
Sbjct: 2   SIIVISGCATGIGAATRKVLEAAGHQIVGIDIRD---AEVI---------------ADLS 43

Query: 108 KVDDCRSLVEETM-NHFGRLDHLVNNAGISSVALFEDIVNITDFKQIMNINFWGSVYTTR 166
             +  +  + + +      +D LV  AG+                 ++++N++G+     
Sbjct: 44  TAEGRKQAIADVLAKCSKGMDGLVLCAGLGPQT--------KVLGNVVSVNYFGATELMD 95

Query: 167 FAVPHLRYT-KGKIVVLSSAASWLTA----------------------------PRMSFY 197
             +P L+   +   VV+SS AS   A                                 Y
Sbjct: 96  AFLPALKKGHQPAAVVISSVASAHLAFDKNPLALALEAGEEAKARAIVEHAGEQGGNLAY 155

Query: 198 NASKAALVLFFETLRVELGSDVGVTI--VTPGFIESELTQGKFLTGRRQ 244
             SK AL +         G   GV +  + PG  E+ L Q      R  
Sbjct: 156 AGSKNALTVAVRKRAAAWGEA-GVRLNTIAPGATETPLLQAGLQDPRYG 203

>2et6_A (3R)-hydroxyacyl-COA dehydrogenase; MFE-2, beta-oxidation, peroxisome, SDR, oxido; 2.22A {Candida tropicalis} Length = 604

 Score =  116 bits (293), Expect = 4e-30
 Identities = 60/204 (29%), Positives = 99/204 (48%), Gaps = 17/204 (8%)

Query: 44  DVSGKVVIITGASSGIGEHLAYEYARRGA---------CLALCARREKSLEEVADTAREI 94
           D   KVVIITGA  G+G++ + E+A+ GA          L       K+ + V D   + 
Sbjct: 5   DFKDKVVIITGAGGGLGKYYSLEFAKLGAKVVVNDLGGALNGQGGNSKAADVVVDEIVKN 64

Query: 95  GSPDVITIRADVSKVDDCRSLVEETMNHFGRLDHLVNNAGISSVALFEDIVNITDFKQIM 154
           G   V    AD + V D   +VE  + +FG +  ++NNAGI   A  + +    D+K ++
Sbjct: 65  GGVAV----ADYNNVLDGDKIVETAVKNFGTVHVIINNAGILRDASMKKM-TEKDYKLVI 119

Query: 155 NINFWGSVYTTRFAVPHLRYTK-GKIVVLSSAASWLTAPRMSFYNASKAALVLFFETLRV 213
           +++  G+   T+ A P+ +  K G+IV  SS A        + Y ++K+AL+ F ETL  
Sbjct: 120 DVHLNGAFAVTKAAWPYFQKQKYGRIVNTSSPAGLYGNFGQANYASAKSALLGFAETLAK 179

Query: 214 ELGS-DVGVTIVTPGFIESELTQG 236
           E    ++    + P    S +T+ 
Sbjct: 180 EGAKYNIKANAIAP-LARSRMTES 202

>2et6_A (3R)-hydroxyacyl-COA dehydrogenase; MFE-2, beta-oxidation, peroxisome, SDR, oxido; 2.22A {Candida tropicalis} Length = 604

 Score = 98.2 bits (245), Expect = 1e-23
 Identities = 48/200 (24%), Positives = 100/200 (50%), Gaps = 13/200 (6%)

Query: 41  FSEDVSGKVVIITGASSGIGEHLAYEYARRGACLALCARREKSLEEVADTAREIGSP--D 98
            +  +  KVV+ITGA +G+G+  A  +A+ GA + +        ++   T  EI +   +
Sbjct: 316 PTVSLKDKVVLITGAGAGLGKEYAKWFAKYGAKVVV-----NDFKDATKTVDEIKAAGGE 370

Query: 99  VITIRADVSKVDDCRSLVEETMNHFGRLDHLVNNAGISSVALFEDIVNITDFKQIMNINF 158
               + DV+   D  ++++  ++ +G +D LVNNAGI     F  + +  ++  +  ++ 
Sbjct: 371 AWPDQHDVA--KDSEAIIKNVIDKYGTIDILVNNAGILRDRSFAKM-SKQEWDSVQQVHL 427

Query: 159 WGSVYTTRFAVPHLRYTK-GKIVVLSSAASWLTAPRMSFYNASKAALVLFFETLRVELGS 217
            G+   +R A P+    + G+I+ ++S +        + Y++SKA ++   +T+ +E   
Sbjct: 428 IGTFNLSRLAWPYFVEKQFGRIINITSTSGIYGNFGQANYSSSKAGILGLSKTMAIEGAK 487

Query: 218 -DVGVTIVTPGFIESELTQG 236
            ++ V IV P   E+ +T  
Sbjct: 488 NNIKVNIVAP-HAETAMTLS 506

>3tl3_A Short-chain type dehydrogenase/reductase; ssgcid, seattle structural genomics center for infectious DI oxidoreductase; 1.85A {Mycobacterium ulcerans} Length = 257

 Score =  109 bits (274), Expect = 4e-29
 Identities = 44/207 (21%), Positives = 85/207 (41%), Gaps = 23/207 (11%)

Query: 44  DVSGKVVIITGASSGIGEHLAYEYARRGACLALCARREKSLEEVADTAREIGSPDVITIR 103
           ++   V ++TG +SG+G          GA + +   R + +        ++G        
Sbjct: 6   EIRDAVAVVTGGASGLGLATTKRLLDAGAQVVVLDIRGEDV------VADLGD-RARFAA 58

Query: 104 ADVSKVDDCRSLVEETMNHFGRLDHLVNNAGISSVALF---EDIVNITDFKQIMNINFWG 160
           ADV+      S + +     G L  +VN AG  +       + + ++  F++I++IN  G
Sbjct: 59  ADVTDEAAVASAL-DLAETMGTLRIVVNCAGTGNAIRVLSRDGVFSLAAFRKIVDINLVG 117

Query: 161 SVYTTRFAVPHLRYT---------KGKIVVLSSAASWLTAPRMSFYNASKAALVLFFETL 211
           S    R A   +  T         +G I+  +S A++      + Y+ASK  +V     +
Sbjct: 118 SFNVLRLAAERIAKTEPVGPNAEERGVIINTASVAAFDGQIGQAAYSASKGGVVGMTLPI 177

Query: 212 RVELGSDVGVTIVT--PGFIESELTQG 236
             +L S   + ++T  PG  ++ L   
Sbjct: 178 ARDLASH-RIRVMTIAPGLFDTPLLAS 203

>3o26_A Salutaridine reductase; short chain dehydrogenase/reductases, oxidoreductase; HET: NDP; 1.91A {Papaver somniferum} Length = 311

 Score =  108 bits (272), Expect = 2e-28
 Identities = 48/267 (17%), Positives = 86/267 (32%), Gaps = 75/267 (28%)

Query: 42  SEDVSGKVVIITGASSGIGEHLAYEYARRGACLALCARREKSLEEVADTAREIGSPDVIT 101
           +     +  ++TG + GIG  +  + +  G  + L  R      E  +  +     +V+ 
Sbjct: 7   NTVTKRRCAVVTGGNKGIGFEICKQLSSNGIMVVLTCRDVTKGHEAVEKLKNSNHENVVF 66

Query: 102 IRADVSKVDDC-RSLVEETMNHFGRLDHLVNNAGISSVALFEDIVNIT------------ 148
            + DV+       SL +    HFG+LD LVNNAG++  ++  D                 
Sbjct: 67  HQLDVTDPIATMSSLADFIKTHFGKLDILVNNAGVAGFSVDADRFKAMISDIGEDSEELV 126

Query: 149 -----------------DFKQIMNINFWGSVYTTRFAVPHLRYT-KGKIVVLSSAASWLT 190
                              ++ + IN+ G    T   +P L+ +   +IV +SS+   L 
Sbjct: 127 KIYEKPEAQELMSETYELAEECLKINYNGVKSVTEVLIPLLQLSDSPRIVNVSSSTGSLK 186

Query: 191 APRMSF-------------------------------------------YNASKAALVLF 207
                                                            Y  SKA L  +
Sbjct: 187 YVSNETALEILGDGDALTEERIDMVVNMLLKDFKENLIETNGWPSFGAAYTTSKACLNAY 246

Query: 208 FETLRVELGSDVGVTIVTPGFIESELT 234
              L  ++     V  V PG +++E+ 
Sbjct: 247 TRVLANKI-PKFQVNCVCPGLVKTEMN 272

>3u0b_A Oxidoreductase, short chain dehydrogenase/reducta protein; structural genomics, ssgcid; 1.70A {Mycobacterium smegmatis} PDB: 3lls_A 3q6i_A* 3m1l_A Length = 454

 Score =  111 bits (279), Expect = 2e-28
 Identities = 56/197 (28%), Positives = 89/197 (45%), Gaps = 18/197 (9%)

Query: 46  SGKVVIITGASSGIGEHLAYEYARRGACLALCARREKSLEEVADTAREIGSPDVITIRAD 105
            GKV ++TGA+ GIG  +A  +AR GA +        + E++   A ++G      +  D
Sbjct: 212 DGKVAVVTGAARGIGATIAEVFARDGATVVAIDVDG-AAEDLKRVADKVG---GTALTLD 267

Query: 106 VSKVDDCRSLVEETMNHFG-RLDHLVNNAGISSVALF----EDIVNITDFKQIMNINFWG 160
           V+  D    +      H G ++D LVNNAGI+   L     E       +  ++ +N   
Sbjct: 268 VTADDAVDKITAHVTEHHGGKVDILVNNAGITRDKLLANMDEK-----RWDAVIAVNLLA 322

Query: 161 SVYTTRFAVPH-LRYTKGKIVVLSSAASWLTAPRMSFYNASKAALVLFFETLRVELGSDV 219
               T   V +      G+++ LSS A        + Y  +KA ++   E L   L    
Sbjct: 323 PQRLTEGLVGNGTIGEGGRVIGLSSMAGIAGNRGQTNYATTKAGMIGLAEALAPVLADK- 381

Query: 220 GVTI--VTPGFIESELT 234
           G+TI  V PGFIE+++T
Sbjct: 382 GITINAVAPGFIETKMT 398

>1wma_A Carbonyl reductase [NADPH] 1; oxidoreductase; HET: AB3 NDP PE5 P33; 1.24A {Homo sapiens} SCOP: c.2.1.2 PDB: 3bhi_A* 3bhj_A* 3bhm_A* 2pfg_A* 1n5d_A* 2hrb_A* Length = 276

 Score =  105 bits (263), Expect = 2e-27
 Identities = 42/243 (17%), Positives = 76/243 (31%), Gaps = 56/243 (23%)

Query: 46  SGKVVIITGASSGIG----EHLAYEYARRGACLALCARREKSLEEVADTAREIGSPDVIT 101
              V ++TG + GIG      L          + L AR     +      +  G      
Sbjct: 3   GIHVALVTGGNKGIGLAIVRDLC---RLFSGDVVLTARDVTRGQAAVQQLQAEG-LSPRF 58

Query: 102 IRADVSKVDDCRSLVEETMNHFGRLDHLVNNAGISSVALFEDIVNITDFKQIMNINFWGS 161
            + D+  +   R+L +     +G LD LVNNAGI+     +        +  M  NF+G+
Sbjct: 59  HQLDIDDLQSIRALRDFLRKEYGGLDVLVNNAGIAFKV-ADPTPFHIQAEVTMKTNFFGT 117

Query: 162 VYTTRFAVPHLRYTKGKIVVLSSAASWLTAPRMSF------------------------- 196
                  +P ++   G++V +SS  S       S                          
Sbjct: 118 RDVCTELLPLIKPQ-GRVVNVSSIMSVRALKSCSPELQQKFRSETITEEELVGLMNKFVE 176

Query: 197 ----------------YNASKAALVLFFETLRVEL-----GSDVGVTIVTPGFIESELTQ 235
                           Y  +K  + +       +L     G  + +    PG++ +++  
Sbjct: 177 DTKKGVHQKEGWPSSAYGVTKIGVTVLSRIHARKLSEQRKGDKILLNACCPGWVRTDMAG 236

Query: 236 GKF 238
            K 
Sbjct: 237 PKA 239

>3oml_A GH14720P, peroxisomal multifunctional enzyme type 2, CG3415; rossmann fold, hot-DOG fold, hydratase 2 motif, peroxisomes, oxidoreductase; 2.15A {Drosophila melanogaster} Length = 613

 Score =  106 bits (267), Expect = 1e-26
 Identities = 51/192 (26%), Positives = 89/192 (46%), Gaps = 16/192 (8%)

Query: 47  GKVVIITGASSGIGEHLAYEYARRGA---------CLALCARREKSLEEVADTAREIGSP 97
           G+V ++TGA +G+G   A  +A RGA           +     +++ + V D  R+ G  
Sbjct: 19  GRVAVVTGAGAGLGREYALLFAERGAKVVVNDLGGTHSGDGASQRAADIVVDEIRKAGGE 78

Query: 98  DVITIRADVSKVDDCRSLVEETMNHFGRLDHLVNNAGISSVALFEDIVNITDFKQIMNIN 157
            V    AD + V D   ++E  +  FGR+D LVNNAGI          +  D+  + +++
Sbjct: 79  AV----ADYNSVIDGAKVIETAIKAFGRVDILVNNAGILRDRSLVKT-SEQDWNLVNDVH 133

Query: 158 FWGSVYTTRFAVPHLR-YTKGKIVVLSSAASWLTAPRMSFYNASKAALVLFFETLRVELG 216
             GS   T+ A P+++    G+I++ SS +          Y A+K  L+    T+ +E  
Sbjct: 134 LKGSFKCTQAAFPYMKKQNYGRIIMTSSNSGIYGNFGQVNYTAAKMGLIGLANTVAIEGA 193

Query: 217 S-DVGVTIVTPG 227
             +V   ++ P 
Sbjct: 194 RNNVLCNVIVPT 205

>1yo6_A Putative carbonyl reductase sniffer; tyrosine-dependent oxidoreductase (SDR family), structural genomics, PSI; 2.60A {Caenorhabditis elegans} SCOP: c.2.1.2 Length = 250

 Score =  102 bits (255), Expect = 2e-26
 Identities = 48/213 (22%), Positives = 83/213 (38%), Gaps = 28/213 (13%)

Query: 46  SGKVVIITGASSGIGEHLAYEYARRGAC--LALCARREKSLEEVADTAREIGSPDVITIR 103
           S   V++TGA+ GIG  L  +  +      +   AR  +   E     + I    V  + 
Sbjct: 2   SPGSVVVTGANRGIGLGLVQQLVKDKNIRHIIATARDVEKATE----LKSIKDSRVHVLP 57

Query: 104 ADVSKVDDCRSLVEETMNHFGR--LDHLVNNAGISSVALFEDIVNITDFKQIMNINFWGS 161
             V+      + V +     G   L  L+NNAG+          N     + +++N    
Sbjct: 58  LTVTCDKSLDTFVSKVGEIVGSDGLSLLINNAGVLLSYGTNTEPNRAVIAEQLDVNTTSV 117

Query: 162 VYTTRFAVPHLR------------YTKGKIVVLSSAASWLTAP-------RMSFYNASKA 202
           V  T+  +P L+             ++  ++ +SS    +T          +  Y  SKA
Sbjct: 118 VLLTQKLLPLLKNAASKESGDQLSVSRAAVITISSGLGSITDNTSGSAQFPVLAYRMSKA 177

Query: 203 ALVLFFETLRVELGSD-VGVTIVTPGFIESELT 234
           A+ +F  TL V+L  D V V    PG++++ L 
Sbjct: 178 AINMFGRTLAVDLKDDNVLVVNFCPGWVQTNLG 210

>1uay_A Type II 3-hydroxyacyl-COA dehydrogenase; beta oxidation, fatty acid, structural genomi structural genomics/proteomics initiative, RSGI; HET: ADN; 1.40A {Thermus thermophilus} SCOP: c.2.1.2 Length = 242

 Score = 98.8 bits (247), Expect = 3e-25
 Identities = 50/201 (24%), Positives = 82/201 (40%), Gaps = 27/201 (13%)

Query: 48  KVVIITGASSGIGEHLAYEYARRGACLALCARREKSLEEVADTAREIGSPDVITIRADVS 107
           +  ++TG +SG+G   A     RG  +            V D  RE    D+I +  DV+
Sbjct: 3   RSALVTGGASGLGRAAALALKARGYRVV-----------VLDLRREGE--DLIYVEGDVT 49

Query: 108 KVDDCRSLVEETMNHFGRLDHLVNNAGISSVALF---EDIVNITDFKQIMNINFWGSVYT 164
           + +D R  V         L  +V+ AG+         E    +  F++++ +N  G+   
Sbjct: 50  REEDVRRAVARAQE-EAPLFAVVSAAGVGLAEKILGKEGPHGLESFRRVLEVNLLGTFNV 108

Query: 165 TRFAVPHLRYT-------KGKIVVLSSAASWLTAPRMSFYNASKAALVLFFETLRVELGS 217
            R A   +R         +G IV  +S A++      + Y ASK  +V        EL  
Sbjct: 109 LRLAAWAMRENPPDAEGQRGVIVNTASVAAFEGQIGQAAYAASKGGVVALTLPAARELAG 168

Query: 218 DVGVTIVT--PGFIESELTQG 236
             G+ +VT  PG  ++ L QG
Sbjct: 169 W-GIRVVTVAPGLFDTPLLQG 188

>1sny_A Sniffer CG10964-PA; alpha and beta protein, rossmann fold, dinucleotide binding oxidoreductase; HET: NAP; 1.75A {Drosophila melanogaster} SCOP: c.2.1.2 Length = 267

 Score = 99.0 bits (247), Expect = 4e-25
 Identities = 42/218 (19%), Positives = 82/218 (37%), Gaps = 23/218 (10%)

Query: 38  NSIFSEDVSGKVVIITGASSGIGEHLAYEYA---RRGACLALCARREKSLEEVADTAREI 94
           + +         ++ITG + G+G  L        +    L    R  +  +E+ D A+  
Sbjct: 12  SGLVPRGSHMNSILITGCNRGLGLGLVKALLNLPQPPQHLFTTCRNREQAKELEDLAKN- 70

Query: 95  GSPDVITIRADVSKVDDCRSLVE--ETMNHFGRLDHLVNNAGISSVALFEDIVNITDFKQ 152
              ++  +  D+   D    LV   E +     L+ L NNAGI+  +     V   +   
Sbjct: 71  -HSNIHILEIDLRNFDAYDKLVADIEGVTKDQGLNVLFNNAGIAPKSARITAVRSQELLD 129

Query: 153 IMNINFWGSVYTTRFAVPHLR------------YTKGKIVVLSSAA---SWLTAPRMSFY 197
            +  N    +   +  +P L+              +  I+ +SS        T   M  Y
Sbjct: 130 TLQTNTVVPIMLAKACLPLLKKAAKANESQPMGVGRAAIINMSSILGSIQGNTDGGMYAY 189

Query: 198 NASKAALVLFFETLRVELGSD-VGVTIVTPGFIESELT 234
             SK+AL    ++L V+L    +    + PG++++++ 
Sbjct: 190 RTSKSALNAATKSLSVDLYPQRIMCVSLHPGWVKTDMG 227

>3rd5_A Mypaa.01249.C; ssgcid, structural genomics, seattle structural genomics CEN infectious disease, oxidoreductase; HET: EPE; 1.50A {Mycobacterium paratuberculosis} Length = 291

 Score = 87.3 bits (217), Expect = 1e-20
 Identities = 55/213 (25%), Positives = 82/213 (38%), Gaps = 42/213 (19%)

Query: 44  DVSGKVVIITGASSGIGEHLAYEYARRGACLALCARREKSLEEVADTAREIGSPDVITIR 103
             + + V+ITGA+SG+G   A E ARRGA + +  R         + A    +  V    
Sbjct: 13  SFAQRTVVITGANSGLGAVTARELARRGATVIMAVRD----TRKGEAAARTMAGQVEVRE 68

Query: 104 ADVSKVDDCRSLVEETMNHFGRLDHLVNNAGISSV--ALFEDIVNITDFKQIMNINFWGS 161
            D+  +   R   +         D L+NNAGI +V  AL  D      F+  +  N  G 
Sbjct: 69  LDLQDLSSVRRFADG----VSGADVLINNAGIMAVPYALTVD-----GFESQIGTNHLGH 119

Query: 162 VYTTRFAVPHLRYTKGKIVVLSSAA-----------SWLTAP--RMSFYNASKAALVLFF 208
              T   +P L     ++V +SS A           +W +        Y+ SK A +LF 
Sbjct: 120 FALTNLLLPRL---TDRVVTVSSMAHWPGRINLEDLNWRSRRYSPWLAYSQSKLANLLFT 176

Query: 209 ETLRVEL-------GSDVGVTIVTPGFIESELT 234
                EL       GS +      PG+  + L 
Sbjct: 177 ----SELQRRLTAAGSPLRALAAHPGYSHTNLQ 205

>1lu9_A Methylene tetrahydromethanopterin dehydrogenase; alpha/beta twisted open sheet structure, oxidoreductase; 1.90A {Methylobacterium extorquens} SCOP: c.2.1.7 c.58.1.4 PDB: 1lua_A* Length = 287

 Score = 69.1 bits (169), Expect = 4e-14
 Identities = 22/162 (13%), Positives = 47/162 (29%), Gaps = 18/162 (11%)

Query: 1   MDLINKFLNLVAPPFTLFSLCLFLPPFLCY---KFLLSVFNSIFSEDVSGKVVIITGASS 57
             +          PF +      L            +++        V GK  ++   + 
Sbjct: 73  ERVFEAVKKRFFGPFRV---SCMLDSNGSNTTAAAGVALVVKAAGGSVKGKKAVVLAGTG 129

Query: 58  GIGEHLAYEYARRGACLALCARREKSLEEVADTAREIGSPDVITIRADVSKVDDCRSLVE 117
            +G   A   A  GA + LC R+    +  AD+  +    +V    A+ +        V+
Sbjct: 130 PVGMRSAALLAGEGAEVVLCGRKLDKAQAAADSVNKRFKVNVTA--AETADDASRAEAVK 187

Query: 118 ETMNHFGRLDHLVNN--AGISSVALFEDIVNITDFKQIMNIN 157
                      +      G+  +       N +  + + + N
Sbjct: 188 GA-------HFVFTAGAIGLELLPQ-AAWQNESSIEIVADYN 221

>4alk_A ENR, enoyl-[acyl-carrier-protein] reductase [NADPH]; oxidoreductase, short-chain dehydrogenase/reductase superfam fatty acid biosynthesis; HET: NAP E9P GLU; 1.90A {Staphylococcus aureus} PDB: 4alj_A* 4ali_A* 4alm_A 4aln_A 3gr6_A* 3gns_A* 3gnt_A 4all_A* Length = 282

 Score = 56.1 bits (136), Expect = 2e-09
 Identities = 32/177 (18%), Positives = 66/177 (37%), Gaps = 28/177 (15%)

Query: 44  DVSGKVVIITGASS------GIGEHLAYEYARRGACLALCARREKSLEEVADTAREIGSP 97
           ++  K  +I G ++      G+ + L     + GA L    R+E+S +E+     ++  P
Sbjct: 29  NLENKTYVIMGIANKRSIAFGVAKVLD----QLGAKLVFTYRKERSRKELEKLLEQLNQP 84

Query: 98  DVITIRADVSKVDDCRSLVEETMNHFGRLDHLVNNAGISSV-ALFEDIVNIT--DFKQIM 154
           +    + DV   ++  +  E+     G +D + ++   +++  L       +   F    
Sbjct: 85  EAHLYQIDVQSDEEVINGFEQIGKDVGNIDGVYHSIAFANMEDLRGRFSETSREGFLLAQ 144

Query: 155 NINFWGSVYT----TRFAVPHLRYTKGKIVVLSSAASWLTAPRMSFYN---ASKAAL 204
           +I    S Y+       A   +    G IV  +             YN    +KA+L
Sbjct: 145 DI----SSYSLTIVAHEAKKLMP-EGGSIVATTYLGGEFAVQN---YNVMGVAKASL 193

>3oig_A Enoyl-[acyl-carrier-protein] reductase [NADH]; fatty acid synthesis, rossmann-like fold, enoyl-ACP reductas binding; HET: NAD IMJ; 1.25A {Bacillus subtilis} PDB: 3oif_A* 2qio_A* 3oje_A 3ojf_A* Length = 266

 Score = 54.5 bits (132), Expect = 4e-09
 Identities = 36/179 (20%), Positives = 65/179 (36%), Gaps = 28/179 (15%)

Query: 42  SEDVSGKVVIITGASS------GIGEHLAYEYARRGACLALCARREKSLEEVADTAREIG 95
           +  + G+ +++ G ++      GI   L       GA L      E+  + V + A  + 
Sbjct: 2   NFSLEGRNIVVMGVANKRSIAWGIARSLH----EAGARLIFTYAGERLEKSVHELAGTLD 57

Query: 96  SPDVITIRADVSKVDDCRSLVEETMNHFGRLDHLVNNAGISSV-ALFEDIVNIT--DFKQ 152
             D I +  DV+   +  +         G +  + +    ++   L  + +N     F  
Sbjct: 58  RNDSIILPCDVTNDAEIETCFASIKEQVGVIHGIAHCIAFANKEELVGEYLNTNRDGFLL 117

Query: 153 IMNINFWGSVYT----TRFAVPHLRYTKGKIVVLSSAASWLTAPRMSFYN---ASKAAL 204
             NI    S Y+     + A P +    G IV L+     L  P    YN    +KA+L
Sbjct: 118 AHNI----SSYSLTAVVKAARPMMT-EGGSIVTLTYLGGELVMPN---YNVMGVAKASL 168

>2p91_A Enoyl-[acyl-carrier-protein] reductase [NADH]; NADH-dependent enoyl-ACP reductase, FABI, aquifex A VF5, structural genomics, PSI; 2.00A {Aquifex aeolicus} Length = 285

 Score = 54.2 bits (131), Expect = 7e-09
 Identities = 48/176 (27%), Positives = 80/176 (45%), Gaps = 31/176 (17%)

Query: 46  SGKVVIITGASS------GIGEHLAYEYARRGACLALCARREKSLEEVADTAREIGSPDV 99
            GK  +ITG ++      GI +       R GA LA      K  + V + A+  GS   
Sbjct: 20  EGKRALITGVANERSIAYGIAKSFH----REGAQLAFTYATPKLEKRVREIAKGFGSD-- 73

Query: 100 ITIRADVSKVDDCRSLVEETMNHFGRLDHLVNNAGISSV-ALFEDIVNIT--DFKQIMNI 156
           + ++ DVS  +D ++L +    ++G LD +V++   +        +++ +   FK  M+I
Sbjct: 74  LVVKCDVSLDEDIKNLKKFLEENWGSLDIIVHSIAYAPKEEFKGGVIDTSREGFKIAMDI 133

Query: 157 NFWGSVYT----TRFAVPHLRYTKGKIVVLSSAASWLTAPR-MSFYN---ASKAAL 204
               SVY+    TR  +P +    G IV L    S+  A + +  YN    +KAAL
Sbjct: 134 ----SVYSLIALTRELLPLMEGRNGAIVTL----SYYGAEKVVPHYNVMGIAKAAL 181

>2wyu_A Enoyl-[acyl carrier protein] reductase; oxidoreductase, fatty acid biosynthesis, oxidation reduction; 1.50A {Thermus thermophilus} PDB: 1ulu_A 2wyv_A* 2wyw_A* 2yw9_A* Length = 261

 Score = 51.0 bits (123), Expect = 7e-08
 Identities = 48/177 (27%), Positives = 76/177 (42%), Gaps = 30/177 (16%)

Query: 44  DVSGKVVIITGASS------GIGEHLAYEYARRGACLALCARREKSLEEVADTAREIGSP 97
           D+SGK  ++ G ++       I   L       GA +AL  + E+   E    A  +G  
Sbjct: 5   DLSGKKALVMGVTNQRSLGFAIAAKLK----EAGAEVALSYQAERLRPEAEKLAEALGGA 60

Query: 98  DVITIRADVSKVDDCRSLVEETMNHFGRLDHLVNNAGISSV-ALFEDIVNIT--DFKQIM 154
             +  RADV++ ++  +L       FG LD+LV+    +   A+    ++    D+   +
Sbjct: 61  --LLFRADVTQDEELDALFAGVKEAFGGLDYLVHAIAFAPREAMEGRYIDTRRQDWLLAL 118

Query: 155 NINFWGSVYT----TRFAVPHLRYTKGKIVVLSSAASWLTAPRMSFYN---ASKAAL 204
            +    S Y+     R A P LR   G IV L+  AS    P+   YN    +KAAL
Sbjct: 119 EV----SAYSLVAVARRAEPLLR-EGGGIVTLTYYASEKVVPK---YNVMAIAKAAL 167

>2vz8_A Fatty acid synthase; transferase, phosphopantetheine, multienzyme, megasynthase, fatty acid synthesis; 3.2A {Sus scrofa} PDB: 2vz9_A* Length = 2512

 Score = 51.8 bits (124), Expect = 8e-08
 Identities = 42/165 (25%), Positives = 64/165 (38%), Gaps = 12/165 (7%)

Query: 46   SGKVVIITGASSGIGEHLAYEYARRGAC-LALCARREKSLEEVADTAREIGSP--DVITI 102
              K  +ITG   G G  LA     RGA  L L +R        A   RE       V+  
Sbjct: 1883 PHKSYVITGGLGGFGLQLAQWLRLRGAQKLVLTSRSGIRTGYQARQVREWRRQGVQVLVS 1942

Query: 103  RADVSKVDDCRSLVEETMNHFGRLDHLVNNAGISSVALFEDIVNITDFKQIMNINFWGSV 162
             ++ S +D  RSL+ E     G +  + N A +   A+ E+      F+ +    + G+ 
Sbjct: 1943 TSNASSLDGARSLITE-ATQLGPVGGVFNLAMVLRDAVLENQ-TPEFFQDVSKPKYSGTA 2000

Query: 163  Y---TTRFAVPHLRYTKGKIVVLSSAASWLTAPRMSFYNASKAAL 204
                 TR A P L Y     V+ SS +        + Y  + +A+
Sbjct: 2001 NLDRVTREACPELDY----FVIFSSVSCGRGNAGQANYGFANSAM 2041

>3grk_A Enoyl-(acyl-carrier-protein) reductase (NADH); ssgcid, niaid, structural genomics, seattle structural genomics center for infectious disease; 2.35A {Brucella melitensis} PDB: 4eit_A* Length = 293

 Score = 50.3 bits (121), Expect = 1e-07
 Identities = 43/175 (24%), Positives = 70/175 (40%), Gaps = 30/175 (17%)

Query: 46  SGKVVIITGASS------GIGEHLAYEYARRGACLALCARREKSLEEVADTAREIGSPDV 99
            GK  +I G ++      GI +         GA LA   + +   + V   A E+G+   
Sbjct: 30  QGKRGLILGVANNRSIAWGIAKAAR----EAGAELAFTYQGDALKKRVEPLAEELGAF-- 83

Query: 100 ITIRADVSKVDDCRSLVEETMNHFGRLDHLVNNAGISSV-ALFEDIVNIT--DFKQIMNI 156
           +    DV+      ++ E     +G+LD LV+  G S    L    ++ +  +F   M I
Sbjct: 84  VAGHCDVADAASIDAVFETLEKKWGKLDFLVHAIGFSDKDELTGRYIDTSEANFTNTMLI 143

Query: 157 NFWGSVYT----TRFAVPHLRYTKGKIVVLSSAASWLTAPRMSFYN---ASKAAL 204
               SVY+    +R A   +    G I+ L+   +    P    YN    +KAAL
Sbjct: 144 ----SVYSLTAVSRRAEKLMA-DGGSILTLTYYGAEKVMPN---YNVMGVAKAAL 190

>3k31_A Enoyl-(acyl-carrier-protein) reductase; ssgcid, NIH, niaid, SBRI, UW, decode, eonyl-(acyl-carrier-PR reductase, NAD, oxidoreductase; HET: NAD; 1.80A {Anaplasma phagocytophilum} PDB: 3k2e_A* Length = 296

 Score = 50.3 bits (121), Expect = 1e-07
 Identities = 43/175 (24%), Positives = 69/175 (39%), Gaps = 30/175 (17%)

Query: 46  SGKVVIITGASS------GIGEHLAYEYARRGACLALCARREKSLEEVADTAREIGSPDV 99
            GK  +I G ++      GI + +      +GA +AL    E   + V   A  +G    
Sbjct: 29  EGKKGVIIGVANDKSLAWGIAKAVC----AQGAEVALTYLSETFKKRVDPLAESLGVK-- 82

Query: 100 ITIRADVSKVDDCRSLVEETMNHFGRLDHLVNNAGISSV-ALFEDIVNIT--DFKQIMNI 156
           +T+  DVS  +   ++ +     +G LD +V+    S    L    V+ +  +F   M+I
Sbjct: 83  LTVPCDVSDAESVDNMFKVLAEEWGSLDFVVHAVAFSDKNELKGRYVDTSLGNFLTSMHI 142

Query: 157 NFWGSVYT----TRFAVPHLRYTKGKIVVLSSAASWLTAPRMSFYN---ASKAAL 204
               S Y+       A P +    G I+ LS   +    P    YN     KAAL
Sbjct: 143 ----SCYSFTYIASKAEPLMT-NGGSILTLSYYGAEKVVPH---YNVMGVCKAAL 189

>2pd4_A Enoyl-[acyl-carrier-protein] reductase [NADH]; antibacterial target, type II fatty acid biosynthesis, enoyl-ACP-reductase, FABI; HET: NAD DCN; 2.30A {Helicobacter pylori} SCOP: c.2.1.2 PDB: 2pd3_A* Length = 275

 Score = 50.3 bits (121), Expect = 1e-07
 Identities = 46/175 (26%), Positives = 67/175 (38%), Gaps = 30/175 (17%)

Query: 46  SGKVVIITGASS------GIGEHLAYEYARRGACLALCARREKSLEEVADTAREIGSPDV 99
            GK  +I G ++      GI +        +GA LA     E   + V   A+E+ SP  
Sbjct: 5   KGKKGLIVGVANNKSIAYGIAQSCF----NQGATLAFTYLNESLEKRVRPIAQELNSP-- 58

Query: 100 ITIRADVSKVDDCRSLVEETMNHFGRLDHLVNNAGISSV-ALFEDIVNIT--DFKQIMNI 156
                DVSK +  +SL        G LD +V++   +   AL   ++  +   F   M I
Sbjct: 59  YVYELDVSKEEHFKSLYNSVKKDLGSLDFIVHSVAFAPKEALEGSLLETSKSAFNTAMEI 118

Query: 157 NFWGSVYT----TRFAVPHLRYTKGKIVVLSSAASWLTAPRMSFYN---ASKAAL 204
               SVY+    T    P L      ++ LS   S         YN    +KAAL
Sbjct: 119 ----SVYSLIELTNTLKPLLN-NGASVLTLSYLGSTKYMAH---YNVMGLAKAAL 165

>3ek2_A Enoyl-(acyl-carrier-protein) reductase (NADH); ssgcid, oxidoreductase, structural genomics; 1.90A {Burkholderia pseudomallei 1710B} Length = 271

 Score = 49.9 bits (120), Expect = 2e-07
 Identities = 43/176 (24%), Positives = 72/176 (40%), Gaps = 31/176 (17%)

Query: 46  SGKVVIITGASS------GIGEHLAYEYARRGACLALCARREKSLEEVADTAREIGSPDV 99
            GK +++TG  S      GI +       R GA LA     ++  + + + A E GS   
Sbjct: 13  DGKRILLTGLLSNRSIAYGIAKACK----REGAELAFTYVGDRFKDRITEFAAEFGSE-- 66

Query: 100 ITIRADVSKVDDCRSLVEETMNHFGRLDHLVNNAGISSV-ALFEDIVNIT---DFKQIMN 155
           +    DV+      +L      H+  LD LV++ G +   A+  D ++     +F+   +
Sbjct: 67  LVFPCDVADDAQIDALFASLKTHWDSLDGLVHSIGFAPREAIAGDFLDGLTRENFRIAHD 126

Query: 156 INFWGSVYT----TRFAVPHLRYTKGKIVVLSSAASWLTAPRMSFYN---ASKAAL 204
           I    S Y+     + A+P L      ++ LS   +    P    YN    +KAAL
Sbjct: 127 I----SAYSFPALAKAALPMLS-DDASLLTLSYLGAERAIPN---YNTMGLAKAAL 174

>3nrc_A Enoyl-[acyl-carrier-protein] reductase (NADH); rossmann fold, NADH BI oxidoreductase; HET: NAD TCL; 2.10A {Francisella tularensis subsp} PDB: 2jjy_A* Length = 280

 Score = 49.1 bits (118), Expect = 3e-07
 Identities = 35/178 (19%), Positives = 66/178 (37%), Gaps = 35/178 (19%)

Query: 46  SGKVVIITGASS------GIGEHLAYEYARRGACLALC--ARREKSLEEVADTAREIGSP 97
           +GK ++ITG  S      GI + +     R GA LA     + +  +E++     E    
Sbjct: 25  AGKKILITGLLSNKSIAYGIAKAMH----REGAELAFTYVGQFKDRVEKLCA---EFNPA 77

Query: 98  DVITIRADVSKVDDCRSLVEETMNHFGRLDHLVNNAGISSV-ALFEDIVNIT---DFKQI 153
               +  DV    + + L  E    +  LD +V++   +    L  + ++      F   
Sbjct: 78  --AVLPCDVISDQEIKDLFVELGKVWDGLDAIVHSIAFAPRDQLEGNFIDCVTREGFSIA 135

Query: 154 MNINFWGSVYT----TRFAVPHLRYTKGKIVVLSSAASWLTAPRMSFYN---ASKAAL 204
            +I    S Y+     +     ++     +V L+   +    P    YN    +KA+L
Sbjct: 136 HDI----SAYSFAALAKEGRSMMKNRNASMVALTYIGAEKAMPS---YNTMGVAKASL 186

>1qsg_A Enoyl-[acyl-carrier-protein] reductase; enoyl reductase, oxidoreductase; HET: GLC NAD TCL; 1.75A {Escherichia coli} SCOP: c.2.1.2 PDB: 1c14_A* 1i2z_A* 1i30_A* 1lx6_A* 1lxc_A* 1mfp_A* 2fhs_A 1qg6_A* 1dfg_A* 1dfh_A* 1d8a_A* 1dfi_A* 3pje_A* 3pjd_A* 3pjf_A* Length = 265

 Score = 47.9 bits (115), Expect = 8e-07
 Identities = 43/176 (24%), Positives = 73/176 (41%), Gaps = 31/176 (17%)

Query: 46  SGKVVIITGASS------GIGEHLAYEYARRGACLALCARREKSLEEVADTAREIGSPDV 99
           SGK +++TG +S      GI + +     R GA LA   + +K    V + A ++GS   
Sbjct: 8   SGKRILVTGVASKLSIAYGIAQAMH----REGAELAFTYQNDKLKGRVEEFAAQLGSD-- 61

Query: 100 ITIRADVSKVDDCRSLVEETMNHFGRLDHLVNNAGISSV-ALFEDIVNIT---DFKQIMN 155
           I ++ DV++     ++  E    + + D  V++ G +    L  D VN      FK   +
Sbjct: 62  IVLQCDVAEDASIDTMFAELGKVWPKFDGFVHSIGFAPGDQLDGDYVNAVTREGFKIAHD 121

Query: 156 INFWGSVYT----TRFAVPHLRYTKGKIVVLSSAASWLTAPRMSFYN---ASKAAL 204
           I    S Y+     +     L      ++ LS   +    P    YN    +KA+L
Sbjct: 122 I----SSYSFVAMAKACRSMLN-PGSALLTLSYLGAERAIPN---YNVMGLAKASL 169

>3slk_A Polyketide synthase extender module 2; rossmann fold, NADPH, oxidoreductase; HET: NDP; 3.00A {Saccharopolyspora spinosa} Length = 795

 Score = 43.2 bits (102), Expect = 5e-05
 Identities = 33/178 (18%), Positives = 66/178 (37%), Gaps = 30/178 (16%)

Query: 47  GKVVI-------------ITGASSGIG----EHLAYEYARRGA-CLALCARREKSLEEVA 88
           GK+V+             +TG +  +G     HL  E   RG   L L +RR  +    A
Sbjct: 517 GKLVLTMPPVWDAAGTVLVTGGTGALGAEVARHLVIE---RGVRNLVLVSRRGPAASGAA 573

Query: 89  DTAREIGSP--DVITIRADVSKVDDCRSLVEETMNHFGRLDHLVNNAGISSVALFEDIVN 146
           +   ++ +   +V     DV+  +    ++   +     L  +V+ AG+    + E +  
Sbjct: 574 ELVAQLTAYGAEVSLQACDVADRETLAKVLAS-IPDEHPLTAVVHAAGVLDDGVSESL-T 631

Query: 147 ITDFKQIMNINFWGSVYTTRFAVPHLRYTKGKIVVLSSAASWLTAPRMSFYNASKAAL 204
           +    Q++     G+       +         +V+ SS +  L +     Y A+ + L
Sbjct: 632 VERLDQVLRPKVDGARNLLE-LIDPDVA----LVLFSSVSGVLGSGGQGNYAAANSFL 684

>3ajr_A NDP-sugar epimerase; L-threonine dehydrogenase, L-3- hydroxynorvaline, oxidoreductase; HET: NAD; 1.77A {Thermoplasma volcanium} PDB: 3a9w_A* 3a4v_A* 3a1n_A* Length = 317

 Score = 40.4 bits (95), Expect = 3e-04
 Identities = 32/168 (19%), Positives = 59/168 (35%), Gaps = 38/168 (22%)

Query: 49  VVIITGASSGIGEHLAYEYARRGACLALCARREKSLEEVADTAREIGSPDVITIRADVSK 108
           ++++TG+S  IG  L    A +     +          +A    +  +  +  I  DVS 
Sbjct: 1   MILVTGSSGQIGTELVPYLAEKYGKKNV----------IASDIVQRDTGGIKFITLDVSN 50

Query: 109 VDDCRSLVEETMNHFGRLDHLVNNAGISSVALFEDIVNITDFKQIMNINFWGSVYTTRFA 168
            D+    VE+       +D + + AGI S           D      +N  G+      A
Sbjct: 51  RDEIDRAVEKY-----SIDAIFHLAGILSA------KGEKDPALAYKVNMNGTYNILEAA 99

Query: 169 VPHLRYTKGKIVVLSSAA-------------SWLTAPRMSFYNASKAA 203
               ++   K+V+ S+                 +T PR + +  +K A
Sbjct: 100 K---QHRVEKVVIPSTIGVFGPETPKNKVPSITITRPR-TMFGVTKIA 143

>2fr1_A Erythromycin synthase, eryai; short chain dehydrogenase/reductase, oxidoreductase; HET: NDP; 1.79A {Saccharopolyspora erythraea} SCOP: c.2.1.2 c.2.1.2 PDB: 2fr0_A* Length = 486

 Score = 40.4 bits (95), Expect = 3e-04
 Identities = 19/73 (26%), Positives = 32/73 (43%), Gaps = 3/73 (4%)

Query: 49  VVIITGASSGIGEHLAYEYARRGAC-LALCARREKSLEEVADTAREIGS--PDVITIRAD 105
            V++TG + G+G  +A   ARRGA  L L +R     +   +   E+ +          D
Sbjct: 228 TVLVTGGTGGVGGQIARWLARRGAPHLLLVSRSGPDADGAGELVAELEALGARTTVAACD 287

Query: 106 VSKVDDCRSLVEE 118
           V+  +  R L+  
Sbjct: 288 VTDRESVRELLGG 300

>3mje_A AMPHB; rossmann fold, oxidoreductase; HET: NDP; 1.36A {Streptomyces nodosus} PDB: 3mjc_A* 3mjs_A* 3mjv_A* 3mjt_A* Length = 496

 Score = 40.1 bits (94), Expect = 4e-04
 Identities = 20/72 (27%), Positives = 32/72 (44%), Gaps = 3/72 (4%)

Query: 50  VIITGASSGIGEHLAYEYARRGAC-LALCARREKSLEEVADTAREIGS--PDVITIRADV 106
           V++TG + GIG  +A   A +GA  L L +RR       A+   E+      V     D 
Sbjct: 242 VLVTGGTGGIGGRVARRLAEQGAAHLVLTSRRGADAPGAAELRAELEQLGVRVTIAACDA 301

Query: 107 SKVDDCRSLVEE 118
           +  +   +L+ E
Sbjct: 302 ADREALAALLAE 313

Structure Templates Detected by HHsearch

Original result of HHsearch against PDB70 database

ID	Length	Definition	Probability
Query	248
4fn4_A	254	Short chain dehydrogenase; NADH-binding, rossmann	100.0
4g81_D	255	Putative hexonate dehydrogenase; enzyme function i	100.0
4fgs_A	273	Probable dehydrogenase protein; PSI-biology, nysgr	100.0
4gkb_A	258	3-oxoacyl-[acyl-carrier protein] reductase; putati	100.0
3ged_A	247	Short-chain dehydrogenase/reductase SDR; SCOR, ros	100.0
4hp8_A	247	2-deoxy-D-gluconate 3-dehydrogenase; enzyme functi	100.0
4b79_A	242	PA4098, probable short-chain dehydrogenase; oxidor	100.0
4fs3_A	256	Enoyl-[acyl-carrier-protein] reductase [NADPH] FA;	100.0
4h15_A	261	Short chain alcohol dehydrogenase-related dehydro;	100.0
3f1l_A	252	Uncharacterized oxidoreductase YCIK; E. coli, NADP	100.0
3h7a_A	252	Short chain dehydrogenase; oxidoreductase, PSI-2,	100.0
3lf2_A	265	Short chain oxidoreductase Q9HYA2; SDR, SCOR, ross	100.0
3gaf_A	256	7-alpha-hydroxysteroid dehydrogenase; seattle stru	100.0
3ucx_A	264	Short chain dehydrogenase; ssgcid, seattle structu	100.0
3tfo_A	264	Putative 3-oxoacyl-(acyl-carrier-protein) reducta;	100.0
3pk0_A	262	Short-chain dehydrogenase/reductase SDR; ssgcid, s	100.0
4dry_A	281	3-oxoacyl-[acyl-carrier-protein] reductase; struct	100.0
3v8b_A	283	Putative dehydrogenase, possibly 3-oxoacyl-[acyl-	100.0
3op4_A	248	3-oxoacyl-[acyl-carrier protein] reductase; 3-keto	100.0
3uve_A	286	Carveol dehydrogenase ((+)-trans-carveol dehydrog;	100.0
4ibo_A	271	Gluconate dehydrogenase; enzyme function initiativ	100.0
2jah_A	247	Clavulanic acid dehydrogenase; short-chain dehydro	100.0
4egf_A	266	L-xylulose reductase; structural genomics, ssgcid,	100.0
3tsc_A	277	Putative oxidoreductase; structural genomics, seat	100.0
3l6e_A	235	Oxidoreductase, short-chain dehydrogenase/reducta;	100.0
3v2h_A	281	D-beta-hydroxybutyrate dehydrogenase; structural g	100.0
3t7c_A	299	Carveol dehydrogenase; structural genomics, seattl	100.0
3rwb_A	247	TPLDH, pyridoxal 4-dehydrogenase; short chain dehy	100.0
3s55_A	281	Putative short-chain dehydrogenase/reductase; stru	100.0
3nyw_A	250	Putative oxidoreductase; fatty acid synthesis,3-ox	100.0
3pgx_A	280	Carveol dehydrogenase; structural genomics, seattl	100.0
3svt_A	281	Short-chain type dehydrogenase/reductase; ssgcid,	100.0
3oid_A	258	Enoyl-[acyl-carrier-protein] reductase [NADPH]; fa	100.0
4dmm_A	269	3-oxoacyl-[acyl-carrier-protein] reductase; rossma	100.0
3ftp_A	270	3-oxoacyl-[acyl-carrier protein] reductase; ssgcid	100.0
3rih_A	293	Short chain dehydrogenase or reductase; structural	100.0
3edm_A	259	Short chain dehydrogenase; structural genomics, ox	100.0
3imf_A	257	Short chain dehydrogenase; structural genomics, in	100.0
3tox_A	280	Short chain dehydrogenase; structural genomics, PS	100.0
3i1j_A	247	Oxidoreductase, short chain dehydrogenase/reducta;	100.0
3tzq_B	271	Short-chain type dehydrogenase/reductase; ssgcid,	100.0
3tpc_A	257	Short chain alcohol dehydrogenase-related dehydro;	100.0
4imr_A	275	3-oxoacyl-(acyl-carrier-protein) reductase; oxidor	100.0
3osu_A	246	3-oxoacyl-[acyl-carrier-protein] reductase; struct	100.0
3r1i_A	276	Short-chain type dehydrogenase/reductase; structur	100.0
4e6p_A	259	Probable sorbitol dehydrogenase (L-iditol 2-dehyd;	100.0
4eso_A	255	Putative oxidoreductase; NADP, structural genomics	100.0
4da9_A	280	Short-chain dehydrogenase/reductase; structural ge	100.0
4fc7_A	277	Peroxisomal 2,4-dienoyl-COA reductase; SDR/rossman	100.0
3rku_A	287	Oxidoreductase YMR226C; substrate fingerprint, sho	100.0
3sc4_A	285	Short chain dehydrogenase (A0QTM2 homolog); ssgcid	100.0
3lyl_A	247	3-oxoacyl-(acyl-carrier-protein) reductase; alpha	100.0
4dyv_A	272	Short-chain dehydrogenase/reductase SDR; structura	100.0
3gvc_A	277	Oxidoreductase, probable short-chain type dehydrog	100.0
4dqx_A	277	Probable oxidoreductase protein; structural genomi	100.0
3e03_A	274	Short chain dehydrogenase; structural genomics, PS	100.0
3is3_A	270	17BETA-hydroxysteroid dehydrogenase; short chain d	100.0
3zv4_A	281	CIS-2,3-dihydrobiphenyl-2,3-DIOL dehydrogenase; ox	100.0
3sju_A	279	Keto reductase; short-chain dehydrogenase, oxidore	100.0
3rkr_A	262	Short chain oxidoreductase; rossmann fold; HET: NA	100.0
3u5t_A	267	3-oxoacyl-[acyl-carrier-protein] reductase; struct	100.0
3dii_A	247	Short-chain dehydrogenase/reductase SDR; SCOR, ros	100.0
3ksu_A	262	3-oxoacyl-acyl carrier protein reductase; structur	100.0
3o38_A	266	Short chain dehydrogenase; tuberculosis, ortholog	100.0
3ijr_A	291	Oxidoreductase, short chain dehydrogenase/reducta;	100.0
3tjr_A	301	Short chain dehydrogenase; structural genomics, se	100.0
3grp_A	266	3-oxoacyl-(acyl carrierprotein) reductase; structu	100.0
1vl8_A	267	Gluconate 5-dehydrogenase; TM0441, structural geno	100.0
2uvd_A	246	3-oxoacyl-(acyl-carrier-protein) reductase; beta-k	100.0
1x1t_A	260	D(-)-3-hydroxybutyrate dehydrogenase; NAD, NADH, S	100.0
3t4x_A	267	Oxidoreductase, short chain dehydrogenase/reducta;	100.0
1zem_A	262	Xylitol dehydrogenase; rossmann fold, dinucleotide	100.0
3oec_A	317	Carveol dehydrogenase (mytha.01326.C, A0R518 HOMO;	100.0
3gem_A	260	Short chain dehydrogenase; structural genomics, AP	100.0
4iin_A	271	3-ketoacyl-acyl carrier protein reductase (FABG);	100.0
1iy8_A	267	Levodione reductase; oxidoreductase; HET: NAD; 1.6	100.0
3ai3_A	263	NADPH-sorbose reductase; rossmann-fold, NADPH-depe	100.0
3v2g_A	271	3-oxoacyl-[acyl-carrier-protein] reductase; struct	100.0
1ae1_A	273	Tropinone reductase-I; oxidoreductase, tropane alk	100.0
2ew8_A	249	(S)-1-phenylethanol dehydrogenase; transferase; 2.	100.0
3sx2_A	278	Putative 3-ketoacyl-(acyl-carrier-protein) reduct;	100.0
3kzv_A	254	Uncharacterized oxidoreductase YIR035C; cytoplasmi	100.0
3p19_A	266	BFPVVD8, putative blue fluorescent protein; rossma	100.0
3uf0_A	273	Short-chain dehydrogenase/reductase SDR; gluconate	100.0
3n74_A	261	3-ketoacyl-(acyl-carrier-protein) reductase; seatt	100.0
2ae2_A	260	Protein (tropinone reductase-II); oxidoreductase,	100.0
3k31_A	296	Enoyl-(acyl-carrier-protein) reductase; ssgcid, NI	100.0
3cxt_A	291	Dehydrogenase with different specificities; rossma	100.0
3r3s_A	294	Oxidoreductase; structural genomics, csgid, center	100.0
3l77_A	235	Short-chain alcohol dehydrogenase; oxidoreductase;	100.0
1xkq_A	280	Short-chain reductase family member (5D234); parra	100.0
1xhl_A	297	Short-chain dehydrogenase/reductase family member	100.0
1e7w_A	291	Pteridine reductase; dihydrofolate reductase, shor	100.0
2zat_A	260	Dehydrogenase/reductase SDR family member 4; alpha	100.0
3a28_C	258	L-2.3-butanediol dehydrogenase; chiral substrate r	100.0
2z1n_A	260	Dehydrogenase; reductase, SDR, oxidoreductase; 1.8	100.0
3qiv_A	253	Short-chain dehydrogenase or 3-oxoacyl-[acyl-CARR	100.0
3ioy_A	319	Short-chain dehydrogenase/reductase SDR; structura	100.0
2b4q_A	276	Rhamnolipids biosynthesis 3-oxoacyl-[acyl- carrier	100.0
3gdg_A	267	Probable NADP-dependent mannitol dehydrogenase; ro	100.0
3vtz_A	269	Glucose 1-dehydrogenase; rossmann fold, oxidoreduc	100.0
3qlj_A	322	Short chain dehydrogenase; structural genomics, se	100.0
1geg_A	256	Acetoin reductase; SDR family, oxidoreductase; HET	100.0
3ezl_A	256	Acetoacetyl-COA reductase; ssgcid, acetyacetyl-COA	100.0
3kvo_A	346	Hydroxysteroid dehydrogenase-like protein 2; HSDL2	100.0
3oig_A	266	Enoyl-[acyl-carrier-protein] reductase [NADH]; fat	100.0
2q2v_A	255	Beta-D-hydroxybutyrate dehydrogenase; SDR, oxidore	100.0
2rhc_B	277	Actinorhodin polyketide ketoreductase; oxidoreduct	100.0
1hdc_A	254	3-alpha, 20 beta-hydroxysteroid dehydrogenase; oxi	100.0
3pxx_A	287	Carveol dehydrogenase; structural genomics, seattl	100.0
1uls_A	245	Putative 3-oxoacyl-acyl carrier protein reductase;	100.0
1oaa_A	259	Sepiapterin reductase; tetrahydrobiopterin, oxidor	100.0
1spx_A	278	Short-chain reductase family member (5L265); paral	100.0
3gk3_A	269	Acetoacetyl-COA reductase; acetoacetyl-CO reductas	100.0
3grk_A	293	Enoyl-(acyl-carrier-protein) reductase (NADH); ssg	100.0
1nff_A	260	Putative oxidoreductase RV2002; directed evolution	100.0
2d1y_A	256	Hypothetical protein TT0321; strucrtural genomics,	100.0
2p91_A	285	Enoyl-[acyl-carrier-protein] reductase [NADH]; NAD	100.0
3o26_A	311	Salutaridine reductase; short chain dehydrogenase/	100.0
1hxh_A	253	3BETA/17BETA-hydroxysteroid dehydrogenase; alpha-b	100.0
2nwq_A	272	Probable short-chain dehydrogenase; oxidoreductase	100.0
1mxh_A	276	Pteridine reductase 2; SDR topology, protein-subst	100.0
3nrc_A	280	Enoyl-[acyl-carrier-protein] reductase (NADH); ros	100.0
2x9g_A	288	PTR1, pteridine reductase; short chain dehydrogena	100.0
3asu_A	248	Short-chain dehydrogenase/reductase SDR; SDR famil	100.0
1yde_A	270	Retinal dehydrogenase/reductase 3; oxidoreductase,	100.0
3i4f_A	264	3-oxoacyl-[acyl-carrier protein] reductase; struct	100.0
4iiu_A	267	3-oxoacyl-[acyl-carrier protein] reductase; struct	100.0
3un1_A	260	Probable oxidoreductase; structural genomics, PSI-	100.0
1g0o_A	283	Trihydroxynaphthalene reductase; protein-NADPH-act	100.0
3m1a_A	281	Putative dehydrogenase; short, PSI, MCSG, structur	100.0
3u9l_A	324	3-oxoacyl-[acyl-carrier-protein] reductase; struct	100.0
3tl3_A	257	Short-chain type dehydrogenase/reductase; ssgcid,	100.0
2qq5_A	260	DHRS1, dehydrogenase/reductase SDR family member 1	100.0
3ek2_A	271	Enoyl-(acyl-carrier-protein) reductase (NADH); ssg	100.0
2a4k_A	263	3-oxoacyl-[acyl carrier protein] reductase; reduct	100.0
4e3z_A	272	Putative oxidoreductase protein; PSI-biology, stru	100.0
2qhx_A	328	Pteridine reductase 1; oxidoreductase, short-chain	100.0
3icc_A	255	Putative 3-oxoacyl-(acyl carrier protein) reducta;	100.0
2pd4_A	275	Enoyl-[acyl-carrier-protein] reductase [NADH]; ant	100.0
3ak4_A	263	NADH-dependent quinuclidinone reductase; SDR, (R)-	100.0
3uxy_A	266	Short-chain dehydrogenase/reductase SDR; structura	100.0
2wyu_A	261	Enoyl-[acyl carrier protein] reductase; oxidoreduc	100.0
2dtx_A	264	Glucose 1-dehydrogenase related protein; rossmann	100.0
1qsg_A	265	Enoyl-[acyl-carrier-protein] reductase; enoyl redu	100.0
1gee_A	261	Glucose 1-dehydrogenase; short-chain dehydrogenase	100.0
3ppi_A	281	3-hydroxyacyl-COA dehydrogenase type-2; ssgcid, de	100.0
2fwm_X	250	2,3-dihydro-2,3-dihydroxybenzoate dehydrogenase; e	100.0
2o23_A	265	HADH2 protein; HSD17B10, schad, ERAB, type II HADH	100.0
2pnf_A	248	3-oxoacyl-[acyl-carrier-protein] reductase; short	100.0
2bd0_A	244	Sepiapterin reductase; oxidoreductase; HET: NAP BI	100.0
3guy_A	230	Short-chain dehydrogenase/reductase SDR; structura	100.0
1xq1_A	266	Putative tropinone reducatse; structural genomics,	100.0
2hq1_A	247	Glucose/ribitol dehydrogenase; CTH-1438, structura	100.0
2nm0_A	253	Probable 3-oxacyl-(acyl-carrier-protein) reductas;	100.0
3awd_A	260	GOX2181, putative polyol dehydrogenase; oxidoreduc	100.0
1yb1_A	272	17-beta-hydroxysteroid dehydrogenase type XI; shor	100.0
1zk4_A	251	R-specific alcohol dehydrogenase; short chain redu	100.0
3afn_B	258	Carbonyl reductase; alpha/beta/alpha, rossmann-fol	100.0
1xu9_A	286	Corticosteroid 11-beta-dehydrogenase, isozyme 1; h	100.0
2h7i_A	269	Enoyl-[acyl-carrier-protein] reductase [NADH]; oxi	100.0
2pd6_A	264	Estradiol 17-beta-dehydrogenase 8; short-chain deh	100.0
1uzm_A	247	3-oxoacyl-[acyl-carrier protein] reductase; beta-k	100.0
2cfc_A	250	2-(R)-hydroxypropyl-COM dehydrogenase; NAD, oxidor	100.0
1fmc_A	255	7 alpha-hydroxysteroid dehydrogenase; short-chain	100.0
1h5q_A	265	NADP-dependent mannitol dehydrogenase; oxidoreduct	100.0
2ehd_A	234	Oxidoreductase, oxidoreductase, short-chain dehydr	100.0
3f9i_A	249	3-oxoacyl-[acyl-carrier-protein] reductase; 3-keto	100.0
2c07_A	285	3-oxoacyl-(acyl-carrier protein) reductase; oxidor	100.0
1xg5_A	279	ARPG836; short chain dehydrogenase, human, SGC, st	100.0
1edo_A	244	Beta-keto acyl carrier protein reductase; nucleoti	100.0
3ctm_A	279	Carbonyl reductase; alcohol dehydrogenase, short-c	100.0
2ag5_A	246	DHRS6, dehydrogenase/reductase (SDR family) member	100.0
2ekp_A	239	2-deoxy-D-gluconate 3-dehydrogenase; structural ge	100.0
3s8m_A	422	Enoyl-ACP reductase; rossmann fold, oxidoreductase	100.0
2wsb_A	254	Galactitol dehydrogenase; oxidoreductase, SDR, ros	100.0
3uce_A	223	Dehydrogenase; rossmann fold, oxidoreductase; HET:	100.0
1dhr_A	241	Dihydropteridine reductase; oxidoreductase(acting	100.0
2et6_A	604	(3R)-hydroxyacyl-COA dehydrogenase; MFE-2, beta-ox	100.0
1w6u_A	302	2,4-dienoyl-COA reductase, mitochondrial precursor	100.0
2et6_A	604	(3R)-hydroxyacyl-COA dehydrogenase; MFE-2, beta-ox	100.0
2bgk_A	278	Rhizome secoisolariciresinol dehydrogenase; oxidor	100.0
1ooe_A	236	Dihydropteridine reductase; structural genomics, P	100.0
3zu3_A	405	Putative reductase YPO4104/Y4119/YP_4011; oxidored	100.0
1sby_A	254	Alcohol dehydrogenase; ternary complex, NAD, trifl	100.0
1yxm_A	303	Pecra, peroxisomal trans 2-enoyl COA reductase; pe	100.0
2gdz_A	267	NAD+-dependent 15-hydroxyprostaglandin dehydrogen;	100.0
1ja9_A	274	4HNR, 1,3,6,8-tetrahydroxynaphthalene reductase; p	100.0
3orf_A	251	Dihydropteridine reductase; alpha-beta-alpha sandw	100.0
1yo6_A	250	Putative carbonyl reductase sniffer; tyrosine-depe	100.0
2ph3_A	245	3-oxoacyl-[acyl carrier protein] reductase; TTHA04	100.0
1gz6_A	319	Estradiol 17 beta-dehydrogenase 4; 17BETA-HSD4, MF	100.0
1jtv_A	327	17 beta-hydroxysteroid dehydrogenase type 1; stero	100.0
1sny_A	267	Sniffer CG10964-PA; alpha and beta protein, rossma	100.0
4e4y_A	244	Short chain dehydrogenase family protein; structur	100.0
3e9n_A	245	Putative short-chain dehydrogenase/reductase; stru	100.0
3d3w_A	244	L-xylulose reductase; uronate cycle, short-chain d	100.0
1zmo_A	244	Halohydrin dehalogenase; haloalcohol dehalogenase,	100.0
1zmt_A	254	Haloalcohol dehalogenase HHEC; halohydrin dehaloge	100.0
3lt0_A	329	Enoyl-ACP reductase; triclosan, triclosan variant,	100.0
3u0b_A	454	Oxidoreductase, short chain dehydrogenase/reducta	100.0
3rd5_A	291	Mypaa.01249.C; ssgcid, structural genomics, seattl	100.0
1cyd_A	244	Carbonyl reductase; short-chain dehydrogenase, oxi	100.0
1wma_A	276	Carbonyl reductase [NADPH] 1; oxidoreductase; HET:	100.0
2ptg_A	319	Enoyl-acyl carrier reductase; apicomplexa, enoyl (	100.0
3oml_A	613	GH14720P, peroxisomal multifunctional enzyme type	100.0
2o2s_A	315	Enoyl-acyl carrier reductase; enoyl reductase, tri	100.0
4eue_A	418	Putative reductase CA_C0462; TER, biofuel, synthet	100.0
1o5i_A	249	3-oxoacyl-(acyl carrier protein) reductase; TM1169	100.0
1d7o_A	297	Enoyl-[acyl-carrier protein] reductase (NADH) PRE;	100.0
1uay_A	242	Type II 3-hydroxyacyl-COA dehydrogenase; beta oxid	100.0
3qp9_A	525	Type I polyketide synthase pikaii; rossmann fold,	99.97
3d7l_A	202	LIN1944 protein; APC89317, structural genomics, PS	99.97
1fjh_A	257	3alpha-hydroxysteroid dehydrogenase/carbonyl reduc	99.97
2uv8_A	1887	Fatty acid synthase subunit alpha (FAS2); fatty ac	99.97
2yut_A	207	Putative short-chain oxidoreductase; alpha and bet	99.97
2pff_A	1688	Fatty acid synthase subunit alpha, 3-oxoacyl-[acyl	99.97
2uv9_A	1878	Fatty acid synthase alpha subunits; fungal, dehydr	99.97
3mje_A	496	AMPHB; rossmann fold, oxidoreductase; HET: NDP; 1.	99.96
3slk_A	795	Polyketide synthase extender module 2; rossmann fo	99.96
3zen_D	3089	Fatty acid synthase; transferase, mycolic acid bio	99.95
2dkn_A	255	3-alpha-hydroxysteroid dehydrogenase; oxidoreducta	99.95
2fr1_A	486	Erythromycin synthase, eryai; short chain dehydrog	99.95
2z5l_A	511	Tylkr1, tylactone synthase starter module and modu	99.95
3rft_A	267	Uronate dehydrogenase; apoenzyme, rossmann fold, N	99.93
4ggo_A	401	Trans-2-enoyl-COA reductase; rossmann fold, oxidor	99.92
1y1p_A	342	ARII, aldehyde reductase II; rossmann fold, short	99.91
3e8x_A	236	Putative NAD-dependent epimerase/dehydratase; stru	99.91
3enk_A	341	UDP-glucose 4-epimerase; seattle structural genomi	99.91
2vz8_A	2512	Fatty acid synthase; transferase, phosphopantethei	99.9
2gn4_A	344	FLAA1 protein, UDP-GLCNAC C6 dehydratase; rossmann	99.9
2z1m_A	345	GDP-D-mannose dehydratase; short-chain dehydrogena	99.9
1orr_A	347	CDP-tyvelose-2-epimerase; rossmann fold, short-cha	99.9
1rkx_A	357	CDP-glucose-4,6-dehydratase; SDR, lyase; HET: NAD;	99.9
2bka_A	242	CC3, TAT-interacting protein TIP30; NADPH, PEG600,	99.89
2pk3_A	321	GDP-6-deoxy-D-LYXO-4-hexulose reductase; SDR, shor	99.89
2pzm_A	330	Putative nucleotide sugar epimerase/ dehydratase;	99.88
1i24_A	404	Sulfolipid biosynthesis protein SQD1; SDR, short-c	99.88
2hun_A	336	336AA long hypothetical DTDP-glucose 4,6-dehydrat;	99.88
1gy8_A	397	UDP-galactose 4-epimerase; oxidoreductase; HET: NA	99.88
1sb8_A	352	WBPP; epimerase, 4-epimerase, UDP-galnac, UDP-GLCN	99.88
1kew_A	361	RMLB;, DTDP-D-glucose 4,6-dehydratase; rossmann fo	99.87
2c29_D	337	Dihydroflavonol 4-reductase; flavonoids, short deh	99.87
1ek6_A	348	UDP-galactose 4-epimerase; short-chain dehydrogena	99.87
3r6d_A	221	NAD-dependent epimerase/dehydratase; structural ge	99.87
3nzo_A	399	UDP-N-acetylglucosamine 4,6-dehydratase; structura	99.87
2hrz_A	342	AGR_C_4963P, nucleoside-diphosphate-sugar epimeras	99.86
1xq6_A	253	Unknown protein; structural genomics, protein stru	99.86
3ruf_A	351	WBGU; rossmann fold, UDP-hexose 4-epimerase, isome	99.86
1t2a_A	375	GDP-mannose 4,6 dehydratase; structural genomics c	99.86
1db3_A	372	GDP-mannose 4,6-dehydratase; NADP, GDP-fucose, lya	99.86
3sxp_A	362	ADP-L-glycero-D-mannoheptose-6-epimerase; rossman	99.86
2p4h_X	322	Vestitone reductase; NADPH-dependent reductase, is	99.85
1oc2_A	348	DTDP-glucose 4,6-dehydratase; lyase, NADH, rhamnos	99.85
2p5y_A	311	UDP-glucose 4-epimerase; TTHA0591, structural geno	99.85
1udb_A	338	Epimerase, UDP-galactose-4-epimerase; isomerase; H	99.85
4id9_A	347	Short-chain dehydrogenase/reductase; putative dehy	99.84
3ay3_A	267	NAD-dependent epimerase/dehydratase; glucuronic ac	99.84
2x4g_A	342	Nucleoside-diphosphate-sugar epimerase; isomerase;	99.84
1n7h_A	381	GDP-D-mannose-4,6-dehydratase; rossmann fold, SDR,	99.84
2rh8_A	338	Anthocyanidin reductase; flavonoids, rossmann fold	99.84
3ko8_A	312	NAD-dependent epimerase/dehydratase; isomerase, UD	99.84
3dqp_A	219	Oxidoreductase YLBE; alpha-beta protein., structur	99.84
2c5a_A	379	GDP-mannose-3', 5'-epimerase; short chain dehydrat	99.84
4egb_A	346	DTDP-glucose 4,6-dehydratase; rhamnose pathway, ce	99.84
1rpn_A	335	GDP-mannose 4,6-dehydratase; short-chain dehydroge	99.84
2c20_A	330	UDP-glucose 4-epimerase; carbohydrate metabolism,	99.83
4f6c_A	427	AUSA reductase domain protein; thioester reductase	99.83
3dhn_A	227	NAD-dependent epimerase/dehydratase; reductase, PF	99.83
3ehe_A	313	UDP-glucose 4-epimerase (GALE-1); PSI-II, NYSGXRC,	99.83
2q1w_A	333	Putative nucleotide sugar epimerase/ dehydratase;	99.83
1z45_A	699	GAL10 bifunctional protein; epimerase, mutarotase,	99.82
1hdo_A	206	Biliverdin IX beta reductase; foetal metabolism, H	99.82
1r6d_A	337	TDP-glucose-4,6-dehydratase; rossmann fold, short-	99.82
2q1s_A	377	Putative nucleotide sugar epimerase/ dehydratase;	99.82
2ydy_A	315	Methionine adenosyltransferase 2 subunit beta; oxi	99.82
2yy7_A	312	L-threonine dehydrogenase; thermolabIle, flavobact	99.81
3slg_A	372	PBGP3 protein; structural genomics, seattle struct	99.81
2bll_A	345	Protein YFBG; decarboxylase, short chain dehydroge	99.81
2x6t_A	357	ADP-L-glycero-D-manno-heptose-6-epimerase; isomera	99.81
2a35_A	215	Hypothetical protein PA4017; alpha-beta-alpha sand	99.8
3qvo_A	236	NMRA family protein; structural genomics, PSI-biol	99.8
2b69_A	343	UDP-glucuronate decarboxylase 1; UDP-glucoronic ac	99.79
3h2s_A	224	Putative NADH-flavin reductase; Q03B84, NESG, LCR1	99.78
3ajr_A	317	NDP-sugar epimerase; L-threonine dehydrogenase, L-	99.78
4dqv_A	478	Probable peptide synthetase NRP (peptide synthase;	99.78
1e6u_A	321	GDP-fucose synthetase; epimerase/reductase, SDR, R	99.78
1vl0_A	292	DTDP-4-dehydrorhamnose reductase, RFBD ortholog; s	99.77
3m2p_A	311	UDP-N-acetylglucosamine 4-epimerase; SGXNY, 11155J	99.77
2ggs_A	273	273AA long hypothetical DTDP-4-dehydrorhamnose red	99.77
1z7e_A	660	Protein aRNA; rossmann fold, OB-like fold, hydrola	99.76
3ew7_A	221	LMO0794 protein; Q8Y8U8_lismo, putative NAD-depend	99.76
1eq2_A	310	ADP-L-glycero-D-mannoheptose 6-epimerase; N-termin	99.75
3sc6_A	287	DTDP-4-dehydrorhamnose reductase; RFBD, structural	99.73
1n2s_A	299	DTDP-4-, DTDP-glucose oxidoreductase; rossman-fold	99.73
4b8w_A	319	GDP-L-fucose synthase; oxidoreductase; HET: NAP GD	99.72
2jl1_A	287	Triphenylmethane reductase; oxidoreductase, biorem	99.7
3gpi_A	286	NAD-dependent epimerase/dehydratase; structural ge	99.69
3vps_A	321	TUNA, NAD-dependent epimerase/dehydratase; tunicam	99.69
4f6l_B	508	AUSA reductase domain protein; thioester reductase	99.69
1xgk_A	352	Nitrogen metabolite repression regulator NMRA; ros	99.69
2wm3_A	299	NMRA-like family domain containing protein 1; unkn	99.66
2zcu_A	286	Uncharacterized oxidoreductase YTFG; alpha-beta sa	99.65
3i6i_A	346	Putative leucoanthocyanidin reductase 1; rossmann	99.61
2gas_A	307	Isoflavone reductase; NADPH-dependent reductase, o	99.59
2v6g_A	364	Progesterone 5-beta-reductase; tyrosine-dependent	99.55
1qyd_A	313	Pinoresinol-lariciresinol reductase; NADPH-depende	99.55
3ius_A	286	Uncharacterized conserved protein; APC63810, silic	99.55
3st7_A	369	Capsular polysaccharide synthesis enzyme CAP5F; ro	99.54
1qyc_A	308	Phenylcoumaran benzylic ether reductase PT1; NADPH	99.52
3e48_A	289	Putative nucleoside-diphosphate-sugar epimerase; a	99.51
3oh8_A	516	Nucleoside-diphosphate sugar epimerase (SULA FAMI;	99.5
3c1o_A	321	Eugenol synthase; phenylpropene, PIP reductase, sh	99.49
2r6j_A	318	Eugenol synthase 1; phenylpropene, PIP reductase,	99.47
1lu9_A	287	Methylene tetrahydromethanopterin dehydrogenase; a	99.43
1u7z_A	226	Coenzyme A biosynthesis bifunctional protein coabc	99.15
4b4o_A	298	Epimerase family protein SDR39U1; isomerase; HET:	99.15
1y7t_A	327	Malate dehydrogenase; NAD-dependent-MDH-NADPH comp	99.14
2gk4_A	232	Conserved hypothetical protein; alpha-beta-alpha s	98.98
3ic5_A	118	Putative saccharopine dehydrogenase; structural ge	98.91
4ina_A	405	Saccharopine dehydrogenase; structural genomics, P	98.88
3gxh_A	157	Putative phosphatase (DUF442); YP_001181608.1, str	98.82
1ff9_A	450	Saccharopine reductase; lysine biosynthesis, alpha	98.67
1nvt_A	287	Shikimate 5'-dehydrogenase; structural genomics, P	98.66
1v3u_A	333	Leukotriene B4 12- hydroxydehydrogenase/prostaglan	98.6
1pqw_A	198	Polyketide synthase; rossmann fold, dimer, structu	98.6
2eez_A	369	Alanine dehydrogenase; TTHA0216, structural genomi	98.6
2hcy_A	347	Alcohol dehydrogenase 1; tetramer of asymmetric di	98.59
3tnl_A	315	Shikimate dehydrogenase; structural genomics, cent	98.59
3ond_A	488	Adenosylhomocysteinase; plant protein, enzyme-subs	98.56
2axq_A	467	Saccharopine dehydrogenase; rossmann fold variant,	98.5
2o7s_A	523	DHQ-SDH PR, bifunctional 3-dehydroquinate dehydrat	98.46
1nyt_A	271	Shikimate 5-dehydrogenase; alpha/beta domains, WID	98.44
3llv_A	141	Exopolyphosphatase-related protein; NAD(P)-binding	98.38
2hmt_A	144	YUAA protein; RCK, KTN, KTR, KTRA, ktrab, membrane	98.35
1b8p_A	329	Protein (malate dehydrogenase); oxidoreductase; 1.	98.34
2j3h_A	345	NADP-dependent oxidoreductase P1; double bond redu	98.31
1qor_A	327	Quinone oxidoreductase; HET: NAP; 2.20A {Escherich	98.31
1wly_A	333	CAAR, 2-haloacrylate reductase; NADPH-dependent ox	98.3
3jyo_A	283	Quinate/shikimate dehydrogenase; enzyme-cofactor c	98.29
3t4e_A	312	Quinate/shikimate dehydrogenase; structural genomi	98.28
2zb4_A	357	Prostaglandin reductase 2; rossmann fold, alternat	98.26
2j8z_A	354	Quinone oxidoreductase; medium-chain dehydrogenase	98.24
4b7c_A	336	Probable oxidoreductase; NADP cofactor, rossmann f	98.22
1yb5_A	351	Quinone oxidoreductase; medium-chain dehydrogenase	98.21
2cdc_A	366	Glucose dehydrogenase glucose 1-dehydrogenase, DHG	98.2
1id1_A	153	Putative potassium channel protein; RCK domain, E.	98.13
1p77_A	272	Shikimate 5-dehydrogenase; NADPH, oxidoreductase;	98.09
1jvb_A	347	NAD(H)-dependent alcohol dehydrogenase; archaeon,	98.09
4dup_A	353	Quinone oxidoreductase; PSI-biology, structural ge	98.07
1smk_A	326	Malate dehydrogenase, glyoxysomal; tricarboxylic c	98.03
3abi_A	365	Putative uncharacterized protein PH1688; L-lysine	98.03
1lss_A	140	TRK system potassium uptake protein TRKA homolog;	98.01
2g1u_A	155	Hypothetical protein TM1088A; structural genomics,	98.0
2vhw_A	377	Alanine dehydrogenase; NAD, secreted, oxidoreducta	98.0
2eih_A	343	Alcohol dehydrogenase; zinc ION binding protein, s	97.95
2egg_A	297	AROE, shikimate 5-dehydrogenase; dimer, X-RAY diff	97.95
3qwb_A	334	Probable quinone oxidoreductase; rossmann fold, qu	97.94
3gms_A	340	Putative NADPH:quinone reductase; structural genom	97.93
1p9o_A	313	Phosphopantothenoylcysteine synthetase; ligase; 2.	97.93
3jyn_A	325	Quinone oxidoreductase; rossmann fold, protein-NAD	97.91
3o8q_A	281	Shikimate 5-dehydrogenase I alpha; structural geno	97.91
1hye_A	313	L-lactate/malate dehydrogenase; nucleotide binding	97.87
4a0s_A	447	Octenoyl-COA reductase/carboxylase; oxidoreductase	97.87
3pwz_A	272	Shikimate dehydrogenase 3; alpha-beta, oxidoreduct	97.85
4eye_A	342	Probable oxidoreductase; structural genomics, niai	97.85
1pjc_A	361	Protein (L-alanine dehydrogenase); oxidoreductase,	97.83
1jw9_B	249	Molybdopterin biosynthesis MOEB protein; MOEB: mod	97.78
3pi7_A	349	NADH oxidoreductase; groes-like fold, NAD(P)-bindi	97.78
2c0c_A	362	Zinc binding alcohol dehydrogenase, domain contain	97.76
1yqd_A	366	Sinapyl alcohol dehydrogenase; lignin, monolignol,	97.74
1o6z_A	303	MDH, malate dehydrogenase; halophilic, ION-binding	97.73
3c85_A	183	Putative glutathione-regulated potassium-efflux S	97.73
3fwz_A	140	Inner membrane protein YBAL; TRKA-N domain, E.coli	97.72
3h8v_A	292	Ubiquitin-like modifier-activating enzyme 5; rossm	97.71
3krt_A	456	Crotonyl COA reductase; structural genomics, prote	97.68
2z2v_A	365	Hypothetical protein PH1688; L-lysine dehydrogenas	97.67
3fbg_A	346	Putative arginate lyase; structural genomics, unkn	97.65
1iz0_A	302	Quinone oxidoreductase; APO-enzyme, riken structur	97.64
3oj0_A	144	Glutr, glutamyl-tRNA reductase; structural genomic	97.62
1rjw_A	339	ADH-HT, alcohol dehydrogenase; oxidoreductase, NAD	97.61
3gaz_A	343	Alcohol dehydrogenase superfamily protein; oxidore	97.55
3l4b_C	218	TRKA K+ channel protien TM1088B; potassium channel	97.53
3rui_A	340	Ubiquitin-like modifier-activating enzyme ATG7; au	97.51
2d8a_A	348	PH0655, probable L-threonine 3-dehydrogenase; pyro	97.47
1gu7_A	364	Enoyl-[acyl-carrier-protein] reductase [NADPH, B-s	97.46
3tum_A	269	Shikimate dehydrogenase family protein; rossmann-f	97.46
3fi9_A	343	Malate dehydrogenase; structural genomics, oxidore	97.44
3don_A	277	Shikimate dehydrogenase; alpha-beta structure, ros	97.39
1gpj_A	404	Glutamyl-tRNA reductase; tRNA-dependent tetrapyrro	97.38
3phh_A	269	Shikimate dehydrogenase; shikimate pathway, helico	97.37
3fbt_A	282	Chorismate mutase and shikimate 5-dehydrogenase fu	97.36
4gsl_A	615	Ubiquitin-like modifier-activating enzyme ATG7; ub	97.33
2vn8_A	375	Reticulon-4-interacting protein 1; mitochondrion,	97.32
3vku_A	326	L-LDH, L-lactate dehydrogenase; rossmann fold, NAD	97.28
1mld_A	314	Malate dehydrogenase; oxidoreductase(NAD(A)-CHOH(D	97.27
3pqe_A	326	L-LDH, L-lactate dehydrogenase; FBP, oxidoreductas	97.26
1jay_A	212	Coenzyme F420H2:NADP+ oxidoreductase (FNO); rossma	97.23
5mdh_A	333	Malate dehydrogenase; oxidoreductase, (NAD(A)-CHOH	97.22
3gvi_A	324	Malate dehydrogenase; NAD, oxidoreductase, tricarb	97.22
3m6i_A	363	L-arabinitol 4-dehydrogenase; medium chain dehydro	97.22
1zud_1	251	Adenylyltransferase THIF; thiamin, thiazole, prote	97.2
1xa0_A	328	Putative NADPH dependent oxidoreductases; structur	97.18
3uog_A	363	Alcohol dehydrogenase; structural genomics, protei	97.12
3s2e_A	340	Zinc-containing alcohol dehydrogenase superfamily;	97.1
1cdo_A	374	Alcohol dehydrogenase; oxidoreductase, oxidoreduct	97.1
2dq4_A	343	L-threonine 3-dehydrogenase; NAD-dependent, oxidor	97.09
1e3j_A	352	NADP(H)-dependent ketose reductase; oxidoreductase	97.06
2aef_A	234	Calcium-gated potassium channel MTHK; rossmann fol	97.04
3tl2_A	315	Malate dehydrogenase; center for structural genomi	97.0
3vh1_A	598	Ubiquitin-like modifier-activating enzyme ATG7; au	96.99
2jhf_A	374	Alcohol dehydrogenase E chain; oxidoreductase, met	96.96
3iup_A	379	Putative NADPH:quinone oxidoreductase; YP_296108.1	96.95
4h7p_A	345	Malate dehydrogenase; ssgcid, structural G seattle	96.94
1h2b_A	359	Alcohol dehydrogenase; oxidoreductase, archaea, hy	96.94
1zsy_A	357	Mitochondrial 2-enoyl thioester reductase; medium-	96.94
1e3i_A	376	Alcohol dehydrogenase, class II; HET: NAD; 2.08A {	96.93
1pl8_A	356	Human sorbitol dehydrogenase; NAD, oxidoreductase;	96.93
4aj2_A	331	L-lactate dehydrogenase A chain; oxidoreductase-in	96.93
1x13_A	401	NAD(P) transhydrogenase subunit alpha; NAD(H)-bind	96.92
3u62_A	253	Shikimate dehydrogenase; shikimate pathway, oxidor	96.91
1uuf_A	369	YAHK, zinc-type alcohol dehydrogenase-like protein	96.91
4dvj_A	363	Putative zinc-dependent alcohol dehydrogenase Pro;	96.9
1piw_A	360	Hypothetical zinc-type alcohol dehydrogenase- like	96.9
3p2y_A	381	Alanine dehydrogenase/pyridine nucleotide transhy;	96.89
3p7m_A	321	Malate dehydrogenase; putative dehydrogenase, enzy	96.88
1vj0_A	380	Alcohol dehydrogenase, zinc-containing; TM0436, st	96.85
2fzw_A	373	Alcohol dehydrogenase class III CHI chain; S-nitro	96.84
4e12_A	283	Diketoreductase; oxidoreductase, NADH; HET: 1PE; 1	96.82
3two_A	348	Mannitol dehydrogenase; cinnamyl-alcohol dehydroge	96.81
3uko_A	378	Alcohol dehydrogenase class-3; alcohol dehydrogena	96.78
2b5w_A	357	Glucose dehydrogenase; nucleotide binding motif, o	96.76
3h5n_A	353	MCCB protein; ubiquitin-activating enzyme, microci	96.74
1p0f_A	373	NADP-dependent alcohol dehydrogenase; ADH topology	96.73
1lnq_A	336	MTHK channels, potassium channel related protein;	96.71
2h6e_A	344	ADH-4, D-arabinose 1-dehydrogenase; rossman fold,	96.69
3gqv_A	371	Enoyl reductase; medium-chain reductase (MDR super	96.69
1l7d_A	384	Nicotinamide nucleotide transhydrogenase, subunit	96.67
3tqh_A	321	Quinone oxidoreductase; HET: NDP; 2.44A {Coxiella	96.64
3d0o_A	317	L-LDH 1, L-lactate dehydrogenase 1; cytoplasm, gly	96.62
2cf5_A	357	Atccad5, CAD, cinnamyl alcohol dehydrogenase; lign	96.62
4ej6_A	370	Putative zinc-binding dehydrogenase; structural ge	96.59
1y6j_A	318	L-lactate dehydrogenase; southeast collaboratory f	96.59
3ip1_A	404	Alcohol dehydrogenase, zinc-containing; structural	96.56
4g65_A	461	TRK system potassium uptake protein TRKA; structur	96.54
3tri_A	280	Pyrroline-5-carboxylate reductase; amino acid bios	96.53
1kol_A	398	Formaldehyde dehydrogenase; oxidoreductase; HET: N	96.53
1pzg_A	331	LDH, lactate dehydrogenase; apicomplexa, APAD, tet	96.51
3ldh_A	330	Lactate dehydrogenase; oxidoreductase, CHOH donor,	96.51
1oju_A	294	MDH, malate dehydrogenase; hyperthermophilic, oxid	96.5
3l9w_A	413	Glutathione-regulated potassium-efflux system Pro	96.49
4dio_A	405	NAD(P) transhydrogenase subunit alpha PART 1; stru	96.46
1leh_A	364	Leucine dehydrogenase; oxidoreductase; 2.20A {Lysi	96.45
1ez4_A	318	Lactate dehydrogenase; rossmann fold, oxidoreducta	96.44
2zqz_A	326	L-LDH, L-lactate dehydrogenase; oxidoreductase, ro	96.37
3hhp_A	312	Malate dehydrogenase; MDH, citric acid cycle, TCA	96.22
2v6b_A	304	L-LDH, L-lactate dehydrogenase; oxidoreductase, ra	96.18
3dfz_A	223	SIRC, precorrin-2 dehydrogenase; NAD dehydrogenase	96.15
2x0j_A	294	Malate dehydrogenase; oxidoreductase, hyperthermop	96.15
1p9l_A	245	Dihydrodipicolinate reductase; oxidoreductase, lys	96.14
2raf_A	209	Putative dinucleotide-binding oxidoreductase; NP_7	96.14
3fpc_A	352	NADP-dependent alcohol dehydrogenase; oxydoreducta	96.14
3goh_A	315	Alcohol dehydrogenase, zinc-containing; NP_718042.	96.13
1f8f_A	371	Benzyl alcohol dehydrogenase; rossmann fold, oxido	96.09
2dph_A	398	Formaldehyde dismutase; dismutation of aldehydes,	96.06
1tt7_A	330	YHFP; alcohol dehydrogenase, Zn-dependent, NAD, st	96.04
3nep_X	314	Malate dehydrogenase; halophIle, molecular adpatat	96.02
3nx4_A	324	Putative oxidoreductase; csgid, structural genomic	95.96
1f0y_A	302	HCDH, L-3-hydroxyacyl-COA dehydrogenase; abortive	95.96
2pv7_A	298	T-protein [includes: chorismate mutase (EC 5.4.99	95.95
2rir_A	300	Dipicolinate synthase, A chain; structural genomic	95.95
1edz_A	320	5,10-methylenetetrahydrofolate dehydrogenase; nucl	95.92
3gg9_A	352	D-3-phosphoglycerate dehydrogenase oxidoreductase;	95.91
4gx0_A	565	TRKA domain protein; membrane protein, ION channel	95.91
3qp9_A	525	Type I polyketide synthase pikaii; rossmann fold,	95.9
3jv7_A	345	ADH-A; dehydrogenase, nucleotide binding, rossmann	95.9
1ur5_A	309	Malate dehydrogenase; oxidoreductase, tricarboxyli	95.9
2hk9_A	275	Shikimate dehydrogenase; shikimate pathway, drug d	95.88
1t2d_A	322	LDH-P, L-lactate dehydrogenase; ternary complex, o	95.86
3qha_A	296	Putative oxidoreductase; seattle structural genomi	95.86
2xxj_A	310	L-LDH, L-lactate dehydrogenase; oxidoreductase, hy	95.81
3d1l_A	266	Putative NADP oxidoreductase BF3122; structural ge	95.81
3d4o_A	293	Dipicolinate synthase subunit A; NP_243269.1, stru	95.8
7mdh_A	375	Protein (malate dehydrogenase); chloroplastic mala	95.79
2d5c_A	263	AROE, shikimate 5-dehydrogenase; substrate, dimer,	95.74
3p2o_A	285	Bifunctional protein fold; structural genomics, ce	95.73
3njr_A	204	Precorrin-6Y methylase; methyltransferase, decarbo	95.73
3c24_A	286	Putative oxidoreductase; YP_511008.1, structural g	95.7
4dll_A	320	2-hydroxy-3-oxopropionate reductase; structural ge	95.66
1npy_A	271	Hypothetical shikimate 5-dehydrogenase-like protei	95.65
1guz_A	310	Malate dehydrogenase; oxidoreductase, tricarboxyli	95.64
1y8q_A	346	Ubiquitin-like 1 activating enzyme E1A; SUMO, hete	95.61
3pef_A	287	6-phosphogluconate dehydrogenase, NAD-binding; gam	95.57
1dih_A	273	Dihydrodipicolinate reductase; oxidoreductase; HET	95.56
1y8q_B	640	Anthracycline-, ubiquitin-like 2 activating enzyme	95.54
1tt5_B	434	Ubiquitin-activating enzyme E1C isoform 1; cell cy	95.53
3e05_A	204	Precorrin-6Y C5,15-methyltransferase (decarboxyla;	95.53
4eez_A	348	Alcohol dehydrogenase 1; site-saturation mutagenes	95.5
1a5z_A	319	L-lactate dehydrogenase; oxidoreductase, glycolysi	95.49
3doj_A	310	AT3G25530, dehydrogenase-like protein; gamma-hydro	95.48

>4fn4_A Short chain dehydrogenase; NADH-binding, rossmann fold, oxidoreductase; HET: NAD; 1.75A {Sulfolobus acidocaldarius}

Probab=100.00  E-value=1.3e-48  Score=327.09  Aligned_cols=196  Identities=27%  Similarity=0.450  Sum_probs=181.5

Q ss_pred             cCCCCCEEEEcCCCChHHHHHHHHHHHcCCeEEEEeCCcchHHHHHHHHHhhCCCcEEEEEccCCCHHHHHHHHHHHHhH
Q 044010           43 EDVSGKVVIITGASSGIGEHLAYEYARRGACLALCARREKSLEEVADTAREIGSPDVITIRADVSKVDDCRSLVEETMNH  122 (248)
Q Consensus        43 ~~~~~k~~lVtGg~~gIG~aia~~l~~~G~~V~l~~r~~~~~~~~~~~l~~~~~~~v~~~~~D~~~~~~~~~~~~~~~~~  122 (248)
                      ++++||++|||||++|||+++|++|+++|++|++++|+++++++..+++++.+. ++.++++|++|+++++++++++.++
T Consensus         3 ~sL~gKvalVTGas~GIG~aiA~~la~~Ga~Vv~~~~~~~~~~~~~~~i~~~g~-~~~~~~~Dvt~~~~v~~~~~~~~~~   81 (254)
T 4fn4_A            3 QSLKNKVVIVTGAGSGIGRAIAKKFALNDSIVVAVELLEDRLNQIVQELRGMGK-EVLGVKADVSKKKDVEEFVRRTFET   81 (254)
T ss_dssp             GGGTTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHTTC-CEEEEECCTTSHHHHHHHHHHHHHH
T ss_pred             CCCCCCEEEEeCCCCHHHHHHHHHHHHcCCEEEEEECCHHHHHHHHHHHHhcCC-cEEEEEccCCCHHHHHHHHHHHHHH
Confidence            479999999999999999999999999999999999999999999999988765 8999999999999999999999999


Q ss_pred             cCCccEEEEccccCCc-ccccccCChHHHHHHHHhhhHHHHHHHHHHhhhhhhc-CCeEEEEcCccccccCCCCccchHH
Q 044010          123 FGRLDHLVNNAGISSV-ALFEDIVNITDFKQIMNINFWGSVYTTRFAVPHLRYT-KGKIVVLSSAASWLTAPRMSFYNAS  200 (248)
Q Consensus       123 ~g~id~vv~~ag~~~~-~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~-~g~iV~isS~~~~~~~~~~~~Y~~s  200 (248)
                      +|++|++|||||+..+ .++.+ .+.++|++.+++|+.|+++++|++.|.|+++ +|+|||+||.++..+.++..+|++|
T Consensus        82 ~G~iDiLVNNAGi~~~~~~~~~-~~~e~~~~~~~vNl~g~~~~~~~~~p~m~~~~~G~IVnisS~~g~~~~~~~~~Y~as  160 (254)
T 4fn4_A           82 YSRIDVLCNNAGIMDGVTPVAE-VSDELWERVLAVNLYSAFYSSRAVIPIMLKQGKGVIVNTASIAGIRGGFAGAPYTVA  160 (254)
T ss_dssp             HSCCCEEEECCCCCCTTCCGGG-CCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEEECCGGGTCSSSSCHHHHHH
T ss_pred             cCCCCEEEECCcccCCCCChhh-CCHHHHHHHHHHHhHHHHHHHHHHHHHHHHcCCcEEEEEechhhcCCCCCChHHHHH
Confidence            9999999999998754 44544 6889999999999999999999999998755 4999999999999999999999999


Q ss_pred             HHHHHHHHHHHHHHhCCC-eEEEEEecCccccCcccccccc
Q 044010          201 KAALVLFFETLRVELGSD-VGVTIVTPGFIESELTQGKFLT  240 (248)
Q Consensus       201 Kaal~~l~~~la~~~~~~-i~v~~v~pg~v~T~~~~~~~~~  240 (248)
                      |+|+.+|+|++|.|++++ ||||+|+||+|+|||......+
T Consensus       161 Kaal~~ltr~lA~ela~~gIrVN~V~PG~i~T~~~~~~~~~  201 (254)
T 4fn4_A          161 KHGLIGLTRSIAAHYGDQGIRAVAVLPGTVKTNIGLGSSKP  201 (254)
T ss_dssp             HHHHHHHHHHHHHHHGGGTEEEEEEEECSBCSSCTTSCSSC
T ss_pred             HHHHHHHHHHHHHHhhhhCeEEEEEEeCCCCCcccccccCC
Confidence            999999999999999985 9999999999999998765443

>4g81_D Putative hexonate dehydrogenase; enzyme function initiative, EFI, structural genomics, dehydr oxidoreductase; 1.90A {Salmonella enterica subsp}

Probab=100.00  E-value=1.5e-47  Score=320.94  Aligned_cols=195  Identities=23%  Similarity=0.334  Sum_probs=182.8

Q ss_pred             CCCCCEEEEcCCCChHHHHHHHHHHHcCCeEEEEeCCcchHHHHHHHHHhhCCCcEEEEEccCCCHHHHHHHHHHHHhHc
Q 044010           44 DVSGKVVIITGASSGIGEHLAYEYARRGACLALCARREKSLEEVADTAREIGSPDVITIRADVSKVDDCRSLVEETMNHF  123 (248)
Q Consensus        44 ~~~~k~~lVtGg~~gIG~aia~~l~~~G~~V~l~~r~~~~~~~~~~~l~~~~~~~v~~~~~D~~~~~~~~~~~~~~~~~~  123 (248)
                      +++||++|||||++|||+++|++|+++|++|++++|+++++++..+++++.+. ++..+++|++|+++++++++++.+++
T Consensus         6 ~L~gKvalVTGas~GIG~aia~~la~~Ga~Vvi~~~~~~~~~~~~~~l~~~g~-~~~~~~~Dv~~~~~v~~~~~~~~~~~   84 (255)
T 4g81_D            6 DLTGKTALVTGSARGLGFAYAEGLAAAGARVILNDIRATLLAESVDTLTRKGY-DAHGVAFDVTDELAIEAAFSKLDAEG   84 (255)
T ss_dssp             CCTTCEEEETTCSSHHHHHHHHHHHHTTCEEEECCSCHHHHHHHHHHHHHTTC-CEEECCCCTTCHHHHHHHHHHHHHTT
T ss_pred             CCCCCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHhcCC-cEEEEEeeCCCHHHHHHHHHHHHHHC
Confidence            78999999999999999999999999999999999999999999999988765 78999999999999999999999999


Q ss_pred             CCccEEEEccccCCcccccccCChHHHHHHHHhhhHHHHHHHHHHhhhhhh--cCCeEEEEcCccccccCCCCccchHHH
Q 044010          124 GRLDHLVNNAGISSVALFEDIVNITDFKQIMNINFWGSVYTTRFAVPHLRY--TKGKIVVLSSAASWLTAPRMSFYNASK  201 (248)
Q Consensus       124 g~id~vv~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~--~~g~iV~isS~~~~~~~~~~~~Y~~sK  201 (248)
                      |++|++|||||.....++.+ .+.++|++.+++|+.|+++++|++.|.|.+  .+|+|||+||..+..+.++..+|++||
T Consensus        85 G~iDiLVNNAG~~~~~~~~~-~~~e~~~~~~~vNl~g~~~~~~~~~p~m~~~~~~G~IVnisS~~~~~~~~~~~~Y~asK  163 (255)
T 4g81_D           85 IHVDILINNAGIQYRKPMVE-LELENWQKVIDTNLTSAFLVSRSAAKRMIARNSGGKIINIGSLTSQAARPTVAPYTAAK  163 (255)
T ss_dssp             CCCCEEEECCCCCCCCCGGG-CCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCCEEEEEECCGGGTSBCTTCHHHHHHH
T ss_pred             CCCcEEEECCCCCCCCChhh-CCHHHHHHHHHHHhHHHHHHHHHHHHHHHHccCCCEEEEEeehhhcCCCCCchhHHHHH
Confidence            99999999999988877776 588999999999999999999999999853  348999999999999999999999999


Q ss_pred             HHHHHHHHHHHHHhCCC-eEEEEEecCccccCcccccccc
Q 044010          202 AALVLFFETLRVELGSD-VGVTIVTPGFIESELTQGKFLT  240 (248)
Q Consensus       202 aal~~l~~~la~~~~~~-i~v~~v~pg~v~T~~~~~~~~~  240 (248)
                      +|+.+|+|++|.|++++ ||||+|+||+|+|||.+....+
T Consensus       164 aal~~ltr~lA~ela~~gIrVN~V~PG~i~T~~~~~~~~~  203 (255)
T 4g81_D          164 GGIKMLTCSMAAEWAQFNIQTNAIGPGYILTDMNTALIED  203 (255)
T ss_dssp             HHHHHHHHHHHHHHGGGTEEEEEEEECSBCCGGGHHHHTC
T ss_pred             HHHHHHHHHHHHHhcccCeEEEEEeeCCCCCchhhcccCC
Confidence            99999999999999985 9999999999999998876543

>4fgs_A Probable dehydrogenase protein; PSI-biology, nysgrc, structural genomics, NEW YORK structura genomics research consortium, three layer; 1.76A {Rhizobium etli}

Probab=100.00  E-value=2.2e-46  Score=316.55  Aligned_cols=197  Identities=27%  Similarity=0.387  Sum_probs=171.7

Q ss_pred             hhhccccCCCCCEEEEcCCCChHHHHHHHHHHHcCCeEEEEeCCcchHHHHHHHHHhhCCCcEEEEEccCCCHHHHHHHH
Q 044010           37 FNSIFSEDVSGKVVIITGASSGIGEHLAYEYARRGACLALCARREKSLEEVADTAREIGSPDVITIRADVSKVDDCRSLV  116 (248)
Q Consensus        37 ~~~~~~~~~~~k~~lVtGg~~gIG~aia~~l~~~G~~V~l~~r~~~~~~~~~~~l~~~~~~~v~~~~~D~~~~~~~~~~~  116 (248)
                      +...|..+++||++|||||++|||+++|++|+++|++|++++|+.+++++..+++   + .++..+++|++|++++++++
T Consensus        19 ~~~~Ms~rL~gKvalVTGas~GIG~aiA~~la~~Ga~V~i~~r~~~~l~~~~~~~---g-~~~~~~~~Dv~~~~~v~~~~   94 (273)
T 4fgs_A           19 YFQSMTQRLNAKIAVITGATSGIGLAAAKRFVAEGARVFITGRRKDVLDAAIAEI---G-GGAVGIQADSANLAELDRLY   94 (273)
T ss_dssp             ------CTTTTCEEEEESCSSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHH---C-TTCEEEECCTTCHHHHHHHH
T ss_pred             chhhhcchhCCCEEEEeCcCCHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHc---C-CCeEEEEecCCCHHHHHHHH
Confidence            3344556799999999999999999999999999999999999998888776665   3 36788999999999999999


Q ss_pred             HHHHhHcCCccEEEEccccCCcccccccCChHHHHHHHHhhhHHHHHHHHHHhhhhhhcCCeEEEEcCccccccCCCCcc
Q 044010          117 EETMNHFGRLDHLVNNAGISSVALFEDIVNITDFKQIMNINFWGSVYTTRFAVPHLRYTKGKIVVLSSAASWLTAPRMSF  196 (248)
Q Consensus       117 ~~~~~~~g~id~vv~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~g~iV~isS~~~~~~~~~~~~  196 (248)
                      +++.+++|++|++|||||.....++.+ .+.++|++.+++|+.|+++++|+++|.|+ ++|+||++||..+..+.++..+
T Consensus        95 ~~~~~~~G~iDiLVNNAG~~~~~~~~~-~~~e~w~~~~~vNl~g~~~~~~~~~p~m~-~~G~IInisS~~~~~~~~~~~~  172 (273)
T 4fgs_A           95 EKVKAEAGRIDVLFVNAGGGSMLPLGE-VTEEQYDDTFDRNVKGVLFTVQKALPLLA-RGSSVVLTGSTAGSTGTPAFSV  172 (273)
T ss_dssp             HHHHHHHSCEEEEEECCCCCCCCCTTS-CCHHHHHHHHHHHTHHHHHHHHHHTTTEE-EEEEEEEECCGGGGSCCTTCHH
T ss_pred             HHHHHHcCCCCEEEECCCCCCCCChhh-ccHHHHHHHHHHHhHHHHHHHHHHHHHHh-hCCeEEEEeehhhccCCCCchH
Confidence            999999999999999999987777766 58899999999999999999999999996 4689999999999999999999


Q ss_pred             chHHHHHHHHHHHHHHHHhCCC-eEEEEEecCccccCccccccc
Q 044010          197 YNASKAALVLFFETLRVELGSD-VGVTIVTPGFIESELTQGKFL  239 (248)
Q Consensus       197 Y~~sKaal~~l~~~la~~~~~~-i~v~~v~pg~v~T~~~~~~~~  239 (248)
                      |++||+|+.+|+|++|.|+++. ||||+|+||+|+|++..+...
T Consensus       173 Y~asKaav~~ltr~lA~Ela~~gIrVN~V~PG~i~T~~~~~~~~  216 (273)
T 4fgs_A          173 YAASKAALRSFARNWILDLKDRGIRINTLSPGPTETTGLVELAG  216 (273)
T ss_dssp             HHHHHHHHHHHHHHHHHHTTTSCEEEEEEEECSBCC--------
T ss_pred             HHHHHHHHHHHHHHHHHHhcccCeEEEEEeeCCCCChhHHHhhc
Confidence            9999999999999999999985 999999999999999876543

>4gkb_A 3-oxoacyl-[acyl-carrier protein] reductase; putative sugar dehydrogenase, enzyme function initiative, EF structural genomics; 1.50A {Burkholderia multivorans} PDB: 4glo_A*

Probab=100.00  E-value=5.7e-46  Score=312.26  Aligned_cols=194  Identities=29%  Similarity=0.378  Sum_probs=174.0

Q ss_pred             cccCCCCCEEEEcCCCChHHHHHHHHHHHcCCeEEEEeCCcchHHHHHHHHHhhCCCcEEEEEccCCCHHHHHHHHHHHH
Q 044010           41 FSEDVSGKVVIITGASSGIGEHLAYEYARRGACLALCARREKSLEEVADTAREIGSPDVITIRADVSKVDDCRSLVEETM  120 (248)
Q Consensus        41 ~~~~~~~k~~lVtGg~~gIG~aia~~l~~~G~~V~l~~r~~~~~~~~~~~l~~~~~~~v~~~~~D~~~~~~~~~~~~~~~  120 (248)
                      |.++++||++|||||++|||+++|++|+++|++|++.+|+.++.+ ..+++.+.+. ++.++.+|++|+++++++++++.
T Consensus         1 M~~~L~gKvalVTGas~GIG~aia~~la~~Ga~Vv~~~r~~~~~~-~~~~~~~~~~-~~~~~~~Dv~~~~~v~~~v~~~~   78 (258)
T 4gkb_A            1 MDLNLQDKVVIVTGGASGIGGAISMRLAEERAIPVVFARHAPDGA-FLDALAQRQP-RATYLPVELQDDAQCRDAVAQTI   78 (258)
T ss_dssp             CCCCCTTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESSCCCHH-HHHHHHHHCT-TCEEEECCTTCHHHHHHHHHHHH
T ss_pred             CCCCCCCCEEEEeCCCCHHHHHHHHHHHHcCCEEEEEECCcccHH-HHHHHHhcCC-CEEEEEeecCCHHHHHHHHHHHH
Confidence            346899999999999999999999999999999999999987754 4455666654 78899999999999999999999


Q ss_pred             hHcCCccEEEEccccCCcccccccCChHHHHHHHHhhhHHHHHHHHHHhhhhhhcCCeEEEEcCccccccCCCCccchHH
Q 044010          121 NHFGRLDHLVNNAGISSVALFEDIVNITDFKQIMNINFWGSVYTTRFAVPHLRYTKGKIVVLSSAASWLTAPRMSFYNAS  200 (248)
Q Consensus       121 ~~~g~id~vv~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~g~iV~isS~~~~~~~~~~~~Y~~s  200 (248)
                      +++|++|++|||||+...... + .+.++|++.+++|+.++++++|++.|+|++++|+|||+||..+..+.++..+|++|
T Consensus        79 ~~~G~iDiLVNnAGi~~~~~~-~-~~~e~~~~~~~vNl~g~~~~~~~~~p~m~~~~G~IVnisS~~~~~~~~~~~~Y~as  156 (258)
T 4gkb_A           79 ATFGRLDGLVNNAGVNDGIGL-D-AGRDAFVASLERNLIHYYAMAHYCVPHLKATRGAIVNISSKTAVTGQGNTSGYCAS  156 (258)
T ss_dssp             HHHSCCCEEEECCCCCCCCCT-T-SCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEECCTHHHHCCSSCHHHHHH
T ss_pred             HHhCCCCEEEECCCCCCCCCc-c-CCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcCCeEEEEeehhhccCCCCchHHHHH
Confidence            999999999999998754443 4 47899999999999999999999999998778999999999999999999999999


Q ss_pred             HHHHHHHHHHHHHHhCCC-eEEEEEecCccccCcccccc
Q 044010          201 KAALVLFFETLRVELGSD-VGVTIVTPGFIESELTQGKF  238 (248)
Q Consensus       201 Kaal~~l~~~la~~~~~~-i~v~~v~pg~v~T~~~~~~~  238 (248)
                      |+|+.+|+|++|.|++++ ||||+|+||+|+|+|.+...
T Consensus       157 Kaav~~ltr~lA~ela~~gIrVN~V~PG~i~T~~~~~~~  195 (258)
T 4gkb_A          157 KGAQLALTREWAVALREHGVRVNAVIPAEVMTPLYRNWI  195 (258)
T ss_dssp             HHHHHHHHHHHHHHHGGGTCEEEEEEECSBCCSCC----
T ss_pred             HHHHHHHHHHHHHHhcccCeEEEEEecCCCCChhHhhhh
Confidence            999999999999999985 99999999999999987654

>3ged_A Short-chain dehydrogenase/reductase SDR; SCOR, rossmann fold, oxidoreductase; 1.70A {Clostridium thermocellum atcc 27405} PDB: 3geg_A*

Probab=100.00  E-value=1.8e-45  Score=306.99  Aligned_cols=187  Identities=25%  Similarity=0.415  Sum_probs=169.7

Q ss_pred             CCEEEEcCCCChHHHHHHHHHHHcCCeEEEEeCCcchHHHHHHHHHhhCCCcEEEEEccCCCHHHHHHHHHHHHhHcCCc
Q 044010           47 GKVVIITGASSGIGEHLAYEYARRGACLALCARREKSLEEVADTAREIGSPDVITIRADVSKVDDCRSLVEETMNHFGRL  126 (248)
Q Consensus        47 ~k~~lVtGg~~gIG~aia~~l~~~G~~V~l~~r~~~~~~~~~~~l~~~~~~~v~~~~~D~~~~~~~~~~~~~~~~~~g~i  126 (248)
                      +|++|||||++|||+++|++|+++|++|++++|+++++++..    +.. .++..+++|++|+++++++++++.+++|++
T Consensus         2 nK~vlVTGas~GIG~aia~~la~~Ga~V~~~~~~~~~~~~~~----~~~-~~~~~~~~Dv~~~~~v~~~v~~~~~~~g~i   76 (247)
T 3ged_A            2 NRGVIVTGGGHGIGKQICLDFLEAGDKVCFIDIDEKRSADFA----KER-PNLFYFHGDVADPLTLKKFVEYAMEKLQRI   76 (247)
T ss_dssp             CCEEEEESTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHH----TTC-TTEEEEECCTTSHHHHHHHHHHHHHHHSCC
T ss_pred             CCEEEEecCCCHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHH----Hhc-CCEEEEEecCCCHHHHHHHHHHHHHHcCCC
Confidence            589999999999999999999999999999999976655433    333 378899999999999999999999999999


Q ss_pred             cEEEEccccCCcccccccCChHHHHHHHHhhhHHHHHHHHHHhhhhhhcCCeEEEEcCccccccCCCCccchHHHHHHHH
Q 044010          127 DHLVNNAGISSVALFEDIVNITDFKQIMNINFWGSVYTTRFAVPHLRYTKGKIVVLSSAASWLTAPRMSFYNASKAALVL  206 (248)
Q Consensus       127 d~vv~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~g~iV~isS~~~~~~~~~~~~Y~~sKaal~~  206 (248)
                      |++|||||.....++.+ .+.++|++.+++|+.++++++|++.|.|.+++|+||++||..+..+.++..+|++||+|+.+
T Consensus        77 DiLVNNAG~~~~~~~~~-~~~e~~~~~~~vNl~g~~~~~~~~~~~m~~~~G~IInisS~~~~~~~~~~~~Y~asKaal~~  155 (247)
T 3ged_A           77 DVLVNNACRGSKGILSS-LLYEEFDYILSVGLKAPYELSRLCRDELIKNKGRIINIASTRAFQSEPDSEAYASAKGGIVA  155 (247)
T ss_dssp             CEEEECCCCCCCCGGGT-CCHHHHHHHHHHHTHHHHHHHHHHHHHHHHTTCEEEEECCGGGTSCCTTCHHHHHHHHHHHH
T ss_pred             CEEEECCCCCCCCCccc-CCHHHHHHHHHHHhHHHHHHHHHHHHHHhhcCCcEEEEeecccccCCCCCHHHHHHHHHHHH
Confidence            99999999988777666 58899999999999999999999999998888999999999999999999999999999999


Q ss_pred             HHHHHHHHhCCCeEEEEEecCccccCccccccc
Q 044010          207 FFETLRVELGSDVGVTIVTPGFIESELTQGKFL  239 (248)
Q Consensus       207 l~~~la~~~~~~i~v~~v~pg~v~T~~~~~~~~  239 (248)
                      |+|++|.|++++||||+|+||+++|++..+...
T Consensus       156 ltk~lA~ela~~IrVN~I~PG~i~t~~~~~~~~  188 (247)
T 3ged_A          156 LTHALAMSLGPDVLVNCIAPGWINVTEQQEFTQ  188 (247)
T ss_dssp             HHHHHHHHHTTTSEEEEEEECSBCCCC---CCH
T ss_pred             HHHHHHHHHCCCCEEEEEecCcCCCCCcHHHHH
Confidence            999999999989999999999999999876543

>4hp8_A 2-deoxy-D-gluconate 3-dehydrogenase; enzyme function initiative, EFI, structural genomics, oxidor; HET: NAP; 1.35A {Agrobacterium tumefaciens}

Probab=100.00  E-value=6e-45  Score=302.84  Aligned_cols=187  Identities=26%  Similarity=0.372  Sum_probs=169.4

Q ss_pred             CCCCCEEEEcCCCChHHHHHHHHHHHcCCeEEEEeCCcchHHHHHHHHHhhCCCcEEEEEccCCCHHHHHHHHHHHHhHc
Q 044010           44 DVSGKVVIITGASSGIGEHLAYEYARRGACLALCARREKSLEEVADTAREIGSPDVITIRADVSKVDDCRSLVEETMNHF  123 (248)
Q Consensus        44 ~~~~k~~lVtGg~~gIG~aia~~l~~~G~~V~l~~r~~~~~~~~~~~l~~~~~~~v~~~~~D~~~~~~~~~~~~~~~~~~  123 (248)
                      +++||++|||||++|||+++|++|+++|++|++.+|+.+  ++..+++++.+. ++..+.+|++|+++++++++     +
T Consensus         6 ~L~GKvalVTGas~GIG~aiA~~la~~Ga~Vvi~~r~~~--~~~~~~~~~~g~-~~~~~~~Dv~d~~~v~~~~~-----~   77 (247)
T 4hp8_A            6 SLEGRKALVTGANTGLGQAIAVGLAAAGAEVVCAARRAP--DETLDIIAKDGG-NASALLIDFADPLAAKDSFT-----D   77 (247)
T ss_dssp             CCTTCEEEETTTTSHHHHHHHHHHHHTTCEEEEEESSCC--HHHHHHHHHTTC-CEEEEECCTTSTTTTTTSST-----T
T ss_pred             CCCCCEEEEeCcCCHHHHHHHHHHHHcCCEEEEEeCCcH--HHHHHHHHHhCC-cEEEEEccCCCHHHHHHHHH-----h
Confidence            789999999999999999999999999999999999865  456677777665 78999999999999887764     4


Q ss_pred             CCccEEEEccccCCcccccccCChHHHHHHHHhhhHHHHHHHHHHhhhhhhc--CCeEEEEcCccccccCCCCccchHHH
Q 044010          124 GRLDHLVNNAGISSVALFEDIVNITDFKQIMNINFWGSVYTTRFAVPHLRYT--KGKIVVLSSAASWLTAPRMSFYNASK  201 (248)
Q Consensus       124 g~id~vv~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~--~g~iV~isS~~~~~~~~~~~~Y~~sK  201 (248)
                      |++|++|||||.....++.+ .+.++|++.+++|+.|+|+++|++.|.|.++  +|+|||+||..+..+.++.++|++||
T Consensus        78 g~iDiLVNNAGi~~~~~~~~-~~~~~w~~~~~vNl~g~f~~~~~~~~~m~~~g~~G~IVnisS~~~~~g~~~~~~Y~asK  156 (247)
T 4hp8_A           78 AGFDILVNNAGIIRRADSVE-FSELDWDEVMDVNLKALFFTTQAFAKELLAKGRSGKVVNIASLLSFQGGIRVPSYTAAK  156 (247)
T ss_dssp             TCCCEEEECCCCCCCCCGGG-CCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCCEEEEEECCGGGTSCCSSCHHHHHHH
T ss_pred             CCCCEEEECCCCCCCCCccc-ccHHHHHHHHHHHhHHHHHHHHHHHHHHHHhCCCcEEEEEechhhCCCCCCChHHHHHH
Confidence            89999999999988777776 5889999999999999999999999998643  48999999999999999999999999


Q ss_pred             HHHHHHHHHHHHHhCCC-eEEEEEecCccccCccccccc
Q 044010          202 AALVLFFETLRVELGSD-VGVTIVTPGFIESELTQGKFL  239 (248)
Q Consensus       202 aal~~l~~~la~~~~~~-i~v~~v~pg~v~T~~~~~~~~  239 (248)
                      +|+.+|+|++|.|++++ ||||+|+||+|+|||.+....
T Consensus       157 aav~~ltr~lA~Ela~~gIrVNaV~PG~i~T~~~~~~~~  195 (247)
T 4hp8_A          157 HGVAGLTKLLANEWAAKGINVNAIAPGYIETNNTEALRA  195 (247)
T ss_dssp             HHHHHHHHHHHHHHGGGTEEEEEEEECSBCSGGGHHHHT
T ss_pred             HHHHHHHHHHHHHHhhcCeEEEEEeeCCCCCcchhhccc
Confidence            99999999999999985 999999999999999876544

>4b79_A PA4098, probable short-chain dehydrogenase; oxidoreductase, infectious disease, structure-based inhibito; HET: NAD; 1.98A {Pseudomonas aeruginosa PAO1}

Probab=100.00  E-value=4.2e-44  Score=297.13  Aligned_cols=184  Identities=29%  Similarity=0.462  Sum_probs=160.3

Q ss_pred             ccC-CCCCEEEEcCCCChHHHHHHHHHHHcCCeEEEEeCCcchHHHHHHHHHhhCCCcEEEEEccCCCHHHHHHHHHHHH
Q 044010           42 SED-VSGKVVIITGASSGIGEHLAYEYARRGACLALCARREKSLEEVADTAREIGSPDVITIRADVSKVDDCRSLVEETM  120 (248)
Q Consensus        42 ~~~-~~~k~~lVtGg~~gIG~aia~~l~~~G~~V~l~~r~~~~~~~~~~~l~~~~~~~v~~~~~D~~~~~~~~~~~~~~~  120 (248)
                      ..| ++||++|||||++|||+++|++|+++|++|++++|+.+++++       ....++..+.+|++|+++++++++   
T Consensus         5 ~~dlf~GK~alVTGas~GIG~aia~~la~~Ga~Vv~~~~~~~~~~~-------~~~~~~~~~~~Dv~~~~~v~~~~~---   74 (242)
T 4b79_A            5 QHDIYAGQQVLVTGGSSGIGAAIAMQFAELGAEVVALGLDADGVHA-------PRHPRIRREELDITDSQRLQRLFE---   74 (242)
T ss_dssp             CTTTTTTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESSTTSTTS-------CCCTTEEEEECCTTCHHHHHHHHH---
T ss_pred             CCCCCCCCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEeCCHHHHhh-------hhcCCeEEEEecCCCHHHHHHHHH---
Confidence            344 599999999999999999999999999999999999876542       223478899999999999888764   


Q ss_pred             hHcCCccEEEEccccCCcccccccCChHHHHHHHHhhhHHHHHHHHHHhhhhhhcCCeEEEEcCccccccCCCCccchHH
Q 044010          121 NHFGRLDHLVNNAGISSVALFEDIVNITDFKQIMNINFWGSVYTTRFAVPHLRYTKGKIVVLSSAASWLTAPRMSFYNAS  200 (248)
Q Consensus       121 ~~~g~id~vv~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~g~iV~isS~~~~~~~~~~~~Y~~s  200 (248)
                       ++|++|++|||||+..+  ..+ .+.++|++.+++|+.|+++++|++.|.|++++|+|||+||..+..+.++.++|++|
T Consensus        75 -~~g~iDiLVNNAGi~~~--~~~-~~~~~w~~~~~vNl~g~~~~~~~~~p~m~~~~G~IVnisS~~~~~~~~~~~~Y~as  150 (242)
T 4b79_A           75 -ALPRLDVLVNNAGISRD--REE-YDLATFERVLRLNLSAAMLASQLARPLLAQRGGSILNIASMYSTFGSADRPAYSAS  150 (242)
T ss_dssp             -HCSCCSEEEECCCCCCG--GGG-GSHHHHHHHHHHHTHHHHHHHHHHHHHHHHHCEEEEEECCGGGTSCCSSCHHHHHH
T ss_pred             -hcCCCCEEEECCCCCCC--ccc-CCHHHHHHHHHHhhHHHHHHHHHHHHHHHHcCCeEEEEeeccccCCCCCCHHHHHH
Confidence             57999999999998643  333 57899999999999999999999999998778999999999999999999999999


Q ss_pred             HHHHHHHHHHHHHHhCCC-eEEEEEecCccccCccccccc
Q 044010          201 KAALVLFFETLRVELGSD-VGVTIVTPGFIESELTQGKFL  239 (248)
Q Consensus       201 Kaal~~l~~~la~~~~~~-i~v~~v~pg~v~T~~~~~~~~  239 (248)
                      |+|+.+|+|++|.|++++ ||||+|+||+|+|||......
T Consensus       151 Kaav~~ltr~lA~Ela~~gIrVNaV~PG~i~T~m~~~~~~  190 (242)
T 4b79_A          151 KGAIVQLTRSLACEYAAERIRVNAIAPGWIDTPLGAGLKA  190 (242)
T ss_dssp             HHHHHHHHHHHHHHHGGGTEEEEEEEECSBCCC-----CC
T ss_pred             HHHHHHHHHHHHHHhhhcCeEEEEEEeCCCCChhhhcccC
Confidence            999999999999999985 999999999999999877654

>4fs3_A Enoyl-[acyl-carrier-protein] reductase [NADPH] FA; rossmann fold, short chain dehydrogenase, NADPH binding, oxidoreductase; HET: 0WD 0WE; 1.80A {Staphylococcus aureus subsp} PDB: 3gr6_A* 3gns_A* 4all_A* 3gnt_A 4alk_A* 4alj_A* 4ali_A* 4alm_A 4aln_A

Probab=100.00  E-value=3.8e-43  Score=295.32  Aligned_cols=196  Identities=18%  Similarity=0.224  Sum_probs=179.0

Q ss_pred             cCCCCCEEEEcCCCC--hHHHHHHHHHHHcCCeEEEEeCCcchHHHHHHHHHhhCCCcEEEEEccCCCHHHHHHHHHHHH
Q 044010           43 EDVSGKVVIITGASS--GIGEHLAYEYARRGACLALCARREKSLEEVADTAREIGSPDVITIRADVSKVDDCRSLVEETM  120 (248)
Q Consensus        43 ~~~~~k~~lVtGg~~--gIG~aia~~l~~~G~~V~l~~r~~~~~~~~~~~l~~~~~~~v~~~~~D~~~~~~~~~~~~~~~  120 (248)
                      ++++||++||||+++  |||+++|++|+++|++|++++|+++..++..+++++.++.++.++++|++|+++++++++++.
T Consensus         2 ~~l~gK~alVTGaa~~~GIG~aiA~~la~~Ga~Vvi~~r~~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~   81 (256)
T 4fs3_A            2 LNLENKTYVIMGIANKRSIAFGVAKVLDQLGAKLVFTYRKERSRKELEKLLEQLNQPEAHLYQIDVQSDEEVINGFEQIG   81 (256)
T ss_dssp             CCCTTCEEEEECCCSTTCHHHHHHHHHHHTTCEEEEEESSGGGHHHHHHHHGGGTCSSCEEEECCTTCHHHHHHHHHHHH
T ss_pred             cCCCCCEEEEECCCCCchHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHhcCCCcEEEEEccCCCHHHHHHHHHHHH
Confidence            589999999999765  999999999999999999999999999999998988877688999999999999999999999


Q ss_pred             hHcCCccEEEEccccCCcccc---cccCChHHHHHHHHhhhHHHHHHHHHHhhhhhhcCCeEEEEcCccccccCCCCccc
Q 044010          121 NHFGRLDHLVNNAGISSVALF---EDIVNITDFKQIMNINFWGSVYTTRFAVPHLRYTKGKIVVLSSAASWLTAPRMSFY  197 (248)
Q Consensus       121 ~~~g~id~vv~~ag~~~~~~~---~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~g~iV~isS~~~~~~~~~~~~Y  197 (248)
                      +++|++|++|||||+....+.   ..+.+.++|+..+++|+.+++.+.+.+.+.++ ++|+||++||..+..+.+++.+|
T Consensus        82 ~~~G~iD~lvnnAg~~~~~~~~~~~~~~~~~~~~~~~~vn~~~~~~~~~~~~~~~~-~~G~IVnisS~~~~~~~~~~~~Y  160 (256)
T 4fs3_A           82 KDVGNIDGVYHSIAFANMEDLRGRFSETSREGFLLAQDISSYSLTIVAHEAKKLMP-EGGSIVATTYLGGEFAVQNYNVM  160 (256)
T ss_dssp             HHHCCCSEEEECCCCCCGGGGTSCGGGCCHHHHHHHHHHHTHHHHHHHHHHHTTCT-TCEEEEEEECGGGTSCCTTTHHH
T ss_pred             HHhCCCCEEEeccccccccccccccccCCHHHHHHHHHHHHHHHHHHHHHHHHHhc-cCCEEEEEeccccccCcccchhh
Confidence            999999999999998754332   23357799999999999999999999998876 57999999999999999999999


Q ss_pred             hHHHHHHHHHHHHHHHHhCCC-eEEEEEecCccccCccccccc
Q 044010          198 NASKAALVLFFETLRVELGSD-VGVTIVTPGFIESELTQGKFL  239 (248)
Q Consensus       198 ~~sKaal~~l~~~la~~~~~~-i~v~~v~pg~v~T~~~~~~~~  239 (248)
                      ++||+|+++|+++||.|++++ ||||+|+||+++|+|.+....
T Consensus       161 ~asKaal~~ltr~lA~Ela~~gIrVN~V~PG~i~T~~~~~~~~  203 (256)
T 4fs3_A          161 GVAKASLEANVKYLALDLGPDNIRVNAISAGPIRTLSAKGVGG  203 (256)
T ss_dssp             HHHHHHHHHHHHHHHHHHGGGTEEEEEEEECCCCSGGGTTCTT
T ss_pred             HHHHHHHHHHHHHHHHHhCccCeEEEEEecCCCCChhhhhccC
Confidence            999999999999999999985 999999999999999876543

>4h15_A Short chain alcohol dehydrogenase-related dehydro; structural genomics, PSI-biology, nysgrc; HET: MSE; 1.45A {Sinorhizobium meliloti} PDB: 4h16_A*

Probab=100.00  E-value=1.2e-42  Score=292.70  Aligned_cols=184  Identities=27%  Similarity=0.394  Sum_probs=163.4

Q ss_pred             cCCCCCEEEEcCCCChHHHHHHHHHHHcCCeEEEEeCCcchHHHHHHHHHhhCCCcEEEEEccCCCHHHHHHHHHHHHhH
Q 044010           43 EDVSGKVVIITGASSGIGEHLAYEYARRGACLALCARREKSLEEVADTAREIGSPDVITIRADVSKVDDCRSLVEETMNH  122 (248)
Q Consensus        43 ~~~~~k~~lVtGg~~gIG~aia~~l~~~G~~V~l~~r~~~~~~~~~~~l~~~~~~~v~~~~~D~~~~~~~~~~~~~~~~~  122 (248)
                      ++++||++|||||++|||+++|++|+++|++|++++|+.++.           ..+..++++|++++++++++++++.++
T Consensus         7 ~~L~GK~alVTGas~GIG~aia~~la~~Ga~V~~~~r~~~~~-----------~~~~~~~~~Dv~~~~~v~~~~~~~~~~   75 (261)
T 4h15_A            7 LNLRGKRALITAGTKGAGAATVSLFLELGAQVLTTARARPEG-----------LPEELFVEADLTTKEGCAIVAEATRQR   75 (261)
T ss_dssp             CCCTTCEEEESCCSSHHHHHHHHHHHHTTCEEEEEESSCCTT-----------SCTTTEEECCTTSHHHHHHHHHHHHHH
T ss_pred             cCCCCCEEEEeccCcHHHHHHHHHHHHcCCEEEEEECCchhC-----------CCcEEEEEcCCCCHHHHHHHHHHHHHH
Confidence            478999999999999999999999999999999999976421           113347899999999999999999999


Q ss_pred             cCCccEEEEccccCCc--ccccccCChHHHHHHHHhhhHHHHHHHHHHhhhhhhc-CCeEEEEcCccccccCC-CCccch
Q 044010          123 FGRLDHLVNNAGISSV--ALFEDIVNITDFKQIMNINFWGSVYTTRFAVPHLRYT-KGKIVVLSSAASWLTAP-RMSFYN  198 (248)
Q Consensus       123 ~g~id~vv~~ag~~~~--~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~-~g~iV~isS~~~~~~~~-~~~~Y~  198 (248)
                      +|++|++|||||....  .++.+ .+.++|++.+++|+.++++++|++.|.|+++ +|+||++||..+..+.| +...|+
T Consensus        76 ~G~iDilVnnAG~~~~~~~~~~~-~~~e~~~~~~~vNl~g~~~~~~~~~p~m~~~~~G~Iv~isS~~~~~~~~~~~~~Y~  154 (261)
T 4h15_A           76 LGGVDVIVHMLGGSSAAGGGFSA-LSDDDWYNELSLNLFAAVRLDRQLVPDMVARGSGVVVHVTSIQRVLPLPESTTAYA  154 (261)
T ss_dssp             TSSCSEEEECCCCCCCCSSCGGG-CCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEEECCGGGTSCCTTTCHHHH
T ss_pred             cCCCCEEEECCCCCccCCCCccc-CCHHHHHHHHHHHhHHHHHHHHhhchhhhhcCCceEEEEEehhhccCCCCccHHHH
Confidence            9999999999997643  34444 6889999999999999999999999999755 49999999999998876 578999


Q ss_pred             HHHHHHHHHHHHHHHHhCCC-eEEEEEecCccccCcccccc
Q 044010          199 ASKAALVLFFETLRVELGSD-VGVTIVTPGFIESELTQGKF  238 (248)
Q Consensus       199 ~sKaal~~l~~~la~~~~~~-i~v~~v~pg~v~T~~~~~~~  238 (248)
                      +||+|+.+|++++|.|++++ ||||+|+||+|+|||.....
T Consensus       155 asKaal~~lt~~lA~Ela~~gIrVN~V~PG~i~T~~~~~~~  195 (261)
T 4h15_A          155 AAKAALSTYSKAMSKEVSPKGVRVVRVSPGWIETEASVRLA  195 (261)
T ss_dssp             HHHHHHHHHHHHHHHHHGGGTEEEEEEEECCBCCHHHHHHH
T ss_pred             HHHHHHHHHHHHHHHHhhhhCeEEEEEeCCCcCCcchhhhh
Confidence            99999999999999999985 99999999999999976543

>3f1l_A Uncharacterized oxidoreductase YCIK; E. coli, NADP+,; 0.95A {Escherichia coli K12} SCOP: c.2.1.0 PDB: 3f1k_A 3e9q_A* 3f5q_A 3gz4_A* 3f5s_A 3gy0_A* 3iah_A* 3g1t_A

Probab=100.00  E-value=5e-41  Score=281.55  Aligned_cols=195  Identities=26%  Similarity=0.388  Sum_probs=178.0

Q ss_pred             cCCCCCEEEEcCCCChHHHHHHHHHHHcCCeEEEEeCCcchHHHHHHHHHhhCCCcEEEEEccC--CCHHHHHHHHHHHH
Q 044010           43 EDVSGKVVIITGASSGIGEHLAYEYARRGACLALCARREKSLEEVADTAREIGSPDVITIRADV--SKVDDCRSLVEETM  120 (248)
Q Consensus        43 ~~~~~k~~lVtGg~~gIG~aia~~l~~~G~~V~l~~r~~~~~~~~~~~l~~~~~~~v~~~~~D~--~~~~~~~~~~~~~~  120 (248)
                      ..++||++|||||++|||+++|++|+++|++|++++|+.++.++..+++.+.++.++.++.+|+  +|.++++++++++.
T Consensus         8 ~~l~~k~vlVTGas~gIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~   87 (252)
T 3f1l_A            8 DLLNDRIILVTGASDGIGREAAMTYARYGATVILLGRNEEKLRQVASHINEETGRQPQWFILDLLTCTSENCQQLAQRIA   87 (252)
T ss_dssp             TTTTTCEEEEESTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHHHSCCCEEEECCTTTCCHHHHHHHHHHHH
T ss_pred             cccCCCEEEEeCCCChHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhhcCCCceEEEEecccCCHHHHHHHHHHHH
Confidence            4689999999999999999999999999999999999999999888888776655788999999  99999999999999


Q ss_pred             hHcCCccEEEEccccCCc-ccccccCChHHHHHHHHhhhHHHHHHHHHHhhhhhhcC-CeEEEEcCccccccCCCCccch
Q 044010          121 NHFGRLDHLVNNAGISSV-ALFEDIVNITDFKQIMNINFWGSVYTTRFAVPHLRYTK-GKIVVLSSAASWLTAPRMSFYN  198 (248)
Q Consensus       121 ~~~g~id~vv~~ag~~~~-~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~-g~iV~isS~~~~~~~~~~~~Y~  198 (248)
                      +++|++|++|||||.... .++.+ .+.++|++.+++|+.++++++++++|.|++++ |+||++||..+..+.++..+|+
T Consensus        88 ~~~g~id~lv~nAg~~~~~~~~~~-~~~~~~~~~~~~N~~g~~~~~~~~~~~m~~~~~g~iv~isS~~~~~~~~~~~~Y~  166 (252)
T 3f1l_A           88 VNYPRLDGVLHNAGLLGDVCPMSE-QNPQVWQDVMQVNVNATFMLTQALLPLLLKSDAGSLVFTSSSVGRQGRANWGAYA  166 (252)
T ss_dssp             HHCSCCSEEEECCCCCCCCSCTTT-CCHHHHHHHHHHHTHHHHHHHHHHHHHHHTSSSCEEEEECCGGGTSCCTTCHHHH
T ss_pred             HhCCCCCEEEECCccCCCCCCccc-CCHHHHHHHHhhhhHHHHHHHHHHHHHHHHCCCCEEEEECChhhccCCCCCchhH
Confidence            999999999999998643 34444 57899999999999999999999999997554 8999999999999999999999


Q ss_pred             HHHHHHHHHHHHHHHHhCCCeEEEEEecCccccCcccccc
Q 044010          199 ASKAALVLFFETLRVELGSDVGVTIVTPGFIESELTQGKF  238 (248)
Q Consensus       199 ~sKaal~~l~~~la~~~~~~i~v~~v~pg~v~T~~~~~~~  238 (248)
                      +||+|+++|+++++.|++++||||+|+||+++|+|.....
T Consensus       167 asK~a~~~l~~~la~e~~~~irvn~v~PG~v~t~~~~~~~  206 (252)
T 3f1l_A          167 ASKFATEGMMQVLADEYQQRLRVNCINPGGTRTAMRASAF  206 (252)
T ss_dssp             HHHHHHHHHHHHHHHHTTTTCEEEEEECCSBSSHHHHHHC
T ss_pred             HHHHHHHHHHHHHHHHhcCCcEEEEEecCcccCchhhhhC
Confidence            9999999999999999987799999999999999976543

>3h7a_A Short chain dehydrogenase; oxidoreductase, PSI-2, NYSGXRC, structural genomics, protein structure initiative; 1.87A {Rhodopseudomonas palustris}

Probab=100.00  E-value=3.6e-41  Score=282.54  Aligned_cols=195  Identities=16%  Similarity=0.238  Sum_probs=168.0

Q ss_pred             ccCCCCCEEEEcCCCChHHHHHHHHHHHcCCeEEEEeCCcchHHHHHHHHHhhCCCcEEEEEccCCCHHHHHHHHHHHHh
Q 044010           42 SEDVSGKVVIITGASSGIGEHLAYEYARRGACLALCARREKSLEEVADTAREIGSPDVITIRADVSKVDDCRSLVEETMN  121 (248)
Q Consensus        42 ~~~~~~k~~lVtGg~~gIG~aia~~l~~~G~~V~l~~r~~~~~~~~~~~l~~~~~~~v~~~~~D~~~~~~~~~~~~~~~~  121 (248)
                      .+++++|++|||||++|||+++|++|+++|++|++++|+.+++++..+++++.+. ++.++.+|++|.++++++++++.+
T Consensus         2 ~~~~~~k~vlVTGas~GIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~-~~~~~~~Dv~~~~~v~~~~~~~~~   80 (252)
T 3h7a_A            2 SLTPRNATVAVIGAGDYIGAEIAKKFAAEGFTVFAGRRNGEKLAPLVAEIEAAGG-RIVARSLDARNEDEVTAFLNAADA   80 (252)
T ss_dssp             ---CCSCEEEEECCSSHHHHHHHHHHHHTTCEEEEEESSGGGGHHHHHHHHHTTC-EEEEEECCTTCHHHHHHHHHHHHH
T ss_pred             CcCCCCCEEEEECCCchHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcCC-eEEEEECcCCCHHHHHHHHHHHHh
Confidence            3578999999999999999999999999999999999999999999999987754 899999999999999999999999


Q ss_pred             HcCCccEEEEccccCCcccccccCChHHHHHHHHhhhHHHHHHHHHHhhhhhhc-CCeEEEEcCccccccCCCCccchHH
Q 044010          122 HFGRLDHLVNNAGISSVALFEDIVNITDFKQIMNINFWGSVYTTRFAVPHLRYT-KGKIVVLSSAASWLTAPRMSFYNAS  200 (248)
Q Consensus       122 ~~g~id~vv~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~-~g~iV~isS~~~~~~~~~~~~Y~~s  200 (248)
                      + |++|++|||||.....++.+ .+.++|++.+++|+.+++.++++++|.|+++ +|+||++||..+..+.++..+|++|
T Consensus        81 ~-g~id~lv~nAg~~~~~~~~~-~~~~~~~~~~~~N~~g~~~~~~~~~~~~~~~~~g~iv~isS~~~~~~~~~~~~Y~as  158 (252)
T 3h7a_A           81 H-APLEVTIFNVGANVNFPILE-TTDRVFRKVWEMACWAGFVSGRESARLMLAHGQGKIFFTGATASLRGGSGFAAFASA  158 (252)
T ss_dssp             H-SCEEEEEECCCCCCCCCGGG-CCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEEEEEGGGTCCCTTCHHHHHH
T ss_pred             h-CCceEEEECCCcCCCCCccc-CCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcCCcEEEEECCHHHcCCCCCCccHHHH
Confidence            9 99999999999887666655 5789999999999999999999999999755 4899999999999999999999999


Q ss_pred             HHHHHHHHHHHHHHhCCC-eEE-EEEecCccccCccccccc
Q 044010          201 KAALVLFFETLRVELGSD-VGV-TIVTPGFIESELTQGKFL  239 (248)
Q Consensus       201 Kaal~~l~~~la~~~~~~-i~v-~~v~pg~v~T~~~~~~~~  239 (248)
                      |+|+++|+++++.|+++. ||| |+|+||+++|+|.+....
T Consensus       159 Kaa~~~l~~~la~e~~~~gi~v~n~v~PG~v~T~~~~~~~~  199 (252)
T 3h7a_A          159 KFGLRAVAQSMARELMPKNIHVAHLIIDSGVDTAWVRERRE  199 (252)
T ss_dssp             HHHHHHHHHHHHHHHGGGTEEEEEEEEC-------------
T ss_pred             HHHHHHHHHHHHHHhhhcCCEEEEEecCCccCChhhhccch
Confidence            999999999999999874 999 999999999999876543

>3lf2_A Short chain oxidoreductase Q9HYA2; SDR, SCOR, rossmann fold; HET: NAP; 2.30A {Pseudomonas aeruginosa} PDB: 3lf1_A*

Probab=100.00  E-value=3.8e-41  Score=284.28  Aligned_cols=196  Identities=25%  Similarity=0.366  Sum_probs=180.1

Q ss_pred             ccCCCCCEEEEcCCCChHHHHHHHHHHHcCCeEEEEeCCcchHHHHHHHHHhh-CCCcEEEEEccCCCHHHHHHHHHHHH
Q 044010           42 SEDVSGKVVIITGASSGIGEHLAYEYARRGACLALCARREKSLEEVADTAREI-GSPDVITIRADVSKVDDCRSLVEETM  120 (248)
Q Consensus        42 ~~~~~~k~~lVtGg~~gIG~aia~~l~~~G~~V~l~~r~~~~~~~~~~~l~~~-~~~~v~~~~~D~~~~~~~~~~~~~~~  120 (248)
                      +.++++|++|||||++|||+++|++|+++|++|++++|+.++.++..+++.+. ++.++.++.+|++|.++++++++++.
T Consensus         3 ~~~l~~k~~lVTGas~GIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~   82 (265)
T 3lf2_A            3 PYDLSEAVAVVTGGSSGIGLATVELLLEAGAAVAFCARDGERLRAAESALRQRFPGARLFASVCDVLDALQVRAFAEACE   82 (265)
T ss_dssp             CCCCTTCEEEEETCSSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHHSTTCCEEEEECCTTCHHHHHHHHHHHH
T ss_pred             ccCcCCCEEEEeCCCChHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHHhcCCceEEEEeCCCCCHHHHHHHHHHHH
Confidence            35789999999999999999999999999999999999999999988888874 34358999999999999999999999


Q ss_pred             hHcCCccEEEEccccCCcccccccCChHHHHHHHHhhhHHHHHHHHHHhhhhhhc-CCeEEEEcCccccccCCCCccchH
Q 044010          121 NHFGRLDHLVNNAGISSVALFEDIVNITDFKQIMNINFWGSVYTTRFAVPHLRYT-KGKIVVLSSAASWLTAPRMSFYNA  199 (248)
Q Consensus       121 ~~~g~id~vv~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~-~g~iV~isS~~~~~~~~~~~~Y~~  199 (248)
                      +++|++|++|||||.....++.+ .+.++|++.+++|+.+++.++++++|.|.++ .|+||++||..+..+.++..+|++
T Consensus        83 ~~~g~id~lvnnAg~~~~~~~~~-~~~~~~~~~~~~N~~g~~~~~~~~~~~~~~~~~g~iv~isS~~~~~~~~~~~~Y~a  161 (265)
T 3lf2_A           83 RTLGCASILVNNAGQGRVSTFAE-TTDEAWSEELQLKFFSVIHPVRAFLPQLESRADAAIVCVNSLLASQPEPHMVATSA  161 (265)
T ss_dssp             HHHCSCSEEEECCCCCCCBCTTT-CCHHHHHHHHHHHHHHHHHHHHHHHHHHTTSTTEEEEEEEEGGGTSCCTTBHHHHH
T ss_pred             HHcCCCCEEEECCCCCCCCCccc-CCHHHHHHHHHHHHHHHHHHHHHHHHHhhccCCeEEEEECCcccCCCCCCchhhHH
Confidence            99999999999999887666655 5789999999999999999999999999755 489999999999999999999999


Q ss_pred             HHHHHHHHHHHHHHHhCCC-eEEEEEecCccccCcccccc
Q 044010          200 SKAALVLFFETLRVELGSD-VGVTIVTPGFIESELTQGKF  238 (248)
Q Consensus       200 sKaal~~l~~~la~~~~~~-i~v~~v~pg~v~T~~~~~~~  238 (248)
                      ||+|+++|+++++.|+++. ||||+|+||+++|++.+...
T Consensus       162 sKaa~~~l~~~la~e~~~~gi~vn~v~PG~v~t~~~~~~~  201 (265)
T 3lf2_A          162 ARAGVKNLVRSMAFEFAPKGVRVNGILIGLVESGQWRRRF  201 (265)
T ss_dssp             HHHHHHHHHHHHHHHHGGGTEEEEEEEECSBCCHHHHHHH
T ss_pred             HHHHHHHHHHHHHHHhcccCeEEEEEEeCcCcCchhhhhh
Confidence            9999999999999999884 99999999999999977654

>3gaf_A 7-alpha-hydroxysteroid dehydrogenase; seattle structural genomics center for infectious disease, ssgcid, oxidoreductase, structural genomics; 2.20A {Brucella melitensis}

Probab=100.00  E-value=4.7e-41  Score=282.43  Aligned_cols=194  Identities=27%  Similarity=0.479  Sum_probs=179.0

Q ss_pred             ccCCCCCEEEEcCCCChHHHHHHHHHHHcCCeEEEEeCCcchHHHHHHHHHhhCCCcEEEEEccCCCHHHHHHHHHHHHh
Q 044010           42 SEDVSGKVVIITGASSGIGEHLAYEYARRGACLALCARREKSLEEVADTAREIGSPDVITIRADVSKVDDCRSLVEETMN  121 (248)
Q Consensus        42 ~~~~~~k~~lVtGg~~gIG~aia~~l~~~G~~V~l~~r~~~~~~~~~~~l~~~~~~~v~~~~~D~~~~~~~~~~~~~~~~  121 (248)
                      +.+++||++|||||++|||+++|++|+++|++|++++|+.++.++..+++++.+. ++.++.+|++|.++++++++++.+
T Consensus         7 ~~~l~~k~vlVTGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~-~~~~~~~Dv~d~~~v~~~~~~~~~   85 (256)
T 3gaf_A            7 PFHLNDAVAIVTGAAAGIGRAIAGTFAKAGASVVVTDLKSEGAEAVAAAIRQAGG-KAIGLECNVTDEQHREAVIKAALD   85 (256)
T ss_dssp             TTCCTTCEEEECSCSSHHHHHHHHHHHHHTCEEEEEESSHHHHHHHHHHHHHTTC-CEEEEECCTTCHHHHHHHHHHHHH
T ss_pred             CCCCCCCEEEEECCCCHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcCC-cEEEEECCCCCHHHHHHHHHHHHH
Confidence            4678999999999999999999999999999999999999988888888877654 799999999999999999999999


Q ss_pred             HcCCccEEEEccccCCcccccccCChHHHHHHHHhhhHHHHHHHHHHhhhhhhc-CCeEEEEcCccccccCCCCccchHH
Q 044010          122 HFGRLDHLVNNAGISSVALFEDIVNITDFKQIMNINFWGSVYTTRFAVPHLRYT-KGKIVVLSSAASWLTAPRMSFYNAS  200 (248)
Q Consensus       122 ~~g~id~vv~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~-~g~iV~isS~~~~~~~~~~~~Y~~s  200 (248)
                      ++|++|++|||||...+.++ + .+.++|++.+++|+.+++++++++.|.|+++ +|+||++||..+..+.++..+|++|
T Consensus        86 ~~g~id~lv~nAg~~~~~~~-~-~~~~~~~~~~~vN~~g~~~l~~~~~~~~~~~~~g~iv~isS~~~~~~~~~~~~Y~as  163 (256)
T 3gaf_A           86 QFGKITVLVNNAGGGGPKPF-D-MPMSDFEWAFKLNLFSLFRLSQLAAPHMQKAGGGAILNISSMAGENTNVRMASYGSS  163 (256)
T ss_dssp             HHSCCCEEEECCCCCCCCCT-T-CCHHHHHHHHHHHTHHHHHHHHHHHHHHHHTTCEEEEEECCGGGTCCCTTCHHHHHH
T ss_pred             HcCCCCEEEECCCCCCCCCC-C-CCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcCCcEEEEEcCHHHcCCCCCchHHHHH
Confidence            99999999999998876655 4 5789999999999999999999999999754 4899999999999999999999999


Q ss_pred             HHHHHHHHHHHHHHhCCC-eEEEEEecCccccCcccccc
Q 044010          201 KAALVLFFETLRVELGSD-VGVTIVTPGFIESELTQGKF  238 (248)
Q Consensus       201 Kaal~~l~~~la~~~~~~-i~v~~v~pg~v~T~~~~~~~  238 (248)
                      |+|+++++++++.|+++. ||||+|+||+++|++.....
T Consensus       164 Kaa~~~~~~~la~e~~~~gi~vn~v~PG~v~T~~~~~~~  202 (256)
T 3gaf_A          164 KAAVNHLTRNIAFDVGPMGIRVNAIAPGAIKTDALATVL  202 (256)
T ss_dssp             HHHHHHHHHHHHHHHGGGTEEEEEEEECCBCCHHHHHHC
T ss_pred             HHHHHHHHHHHHHHHhhhCcEEEEEEEccccCchhhhcc
Confidence            999999999999999874 99999999999999876543

>3ucx_A Short chain dehydrogenase; ssgcid, seattle structural genomics center for infectious DI dehydrogenase, oxidoreductase; HET: 1PE; 1.85A {Mycobacterium smegmatis} SCOP: c.2.1.0

Probab=100.00  E-value=5.8e-41  Score=283.00  Aligned_cols=196  Identities=28%  Similarity=0.465  Sum_probs=178.8

Q ss_pred             cccCCCCCEEEEcCCCChHHHHHHHHHHHcCCeEEEEeCCcchHHHHHHHHHhhCCCcEEEEEccCCCHHHHHHHHHHHH
Q 044010           41 FSEDVSGKVVIITGASSGIGEHLAYEYARRGACLALCARREKSLEEVADTAREIGSPDVITIRADVSKVDDCRSLVEETM  120 (248)
Q Consensus        41 ~~~~~~~k~~lVtGg~~gIG~aia~~l~~~G~~V~l~~r~~~~~~~~~~~l~~~~~~~v~~~~~D~~~~~~~~~~~~~~~  120 (248)
                      +...++||++|||||++|||+++|++|+++|++|++++|+.+++++..+++++.+. ++.++.+|++|.++++++++++.
T Consensus         5 m~~~l~~k~vlVTGas~gIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~-~~~~~~~Dv~~~~~v~~~~~~~~   83 (264)
T 3ucx_A            5 MGGLLTDKVVVISGVGPALGTTLARRCAEQGADLVLAARTVERLEDVAKQVTDTGR-RALSVGTDITDDAQVAHLVDETM   83 (264)
T ss_dssp             --CTTTTCEEEEESCCTTHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHTTC-CEEEEECCTTCHHHHHHHHHHHH
T ss_pred             cCCCcCCcEEEEECCCcHHHHHHHHHHHHCcCEEEEEeCCHHHHHHHHHHHHhcCC-cEEEEEcCCCCHHHHHHHHHHHH
Confidence            34568999999999999999999999999999999999999999998888877654 79999999999999999999999


Q ss_pred             hHcCCccEEEEccccCC-cccccccCChHHHHHHHHhhhHHHHHHHHHHhhhhhhcCCeEEEEcCccccccCCCCccchH
Q 044010          121 NHFGRLDHLVNNAGISS-VALFEDIVNITDFKQIMNINFWGSVYTTRFAVPHLRYTKGKIVVLSSAASWLTAPRMSFYNA  199 (248)
Q Consensus       121 ~~~g~id~vv~~ag~~~-~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~g~iV~isS~~~~~~~~~~~~Y~~  199 (248)
                      +++|++|++|||||... ..++.+ .+.++|++.+++|+.+++++++++.|.|.+++|+||++||..+..+.++..+|++
T Consensus        84 ~~~g~id~lv~nAg~~~~~~~~~~-~~~~~~~~~~~~N~~g~~~~~~~~~~~~~~~~g~iv~isS~~~~~~~~~~~~Y~a  162 (264)
T 3ucx_A           84 KAYGRVDVVINNAFRVPSMKPFAN-TTFEHMRDAIELTVFGALRLIQGFTPALEESKGAVVNVNSMVVRHSQAKYGAYKM  162 (264)
T ss_dssp             HHTSCCSEEEECCCSCCCCCCGGG-CCHHHHHHHHHHHTHHHHHHHHHTHHHHHHHTCEEEEECCGGGGCCCTTCHHHHH
T ss_pred             HHcCCCcEEEECCCCCCCCCCchh-CCHHHHHHHHHHHhHHHHHHHHHHHHHHHHcCCEEEEECcchhccCCCccHHHHH
Confidence            99999999999999864 344444 6889999999999999999999999999877799999999999999999999999


Q ss_pred             HHHHHHHHHHHHHHHhCCC-eEEEEEecCccccCcccccc
Q 044010          200 SKAALVLFFETLRVELGSD-VGVTIVTPGFIESELTQGKF  238 (248)
Q Consensus       200 sKaal~~l~~~la~~~~~~-i~v~~v~pg~v~T~~~~~~~  238 (248)
                      ||+|+++|+++++.|+++. ||||+|+||+|+|++.+..+
T Consensus       163 sKaa~~~~~~~la~e~~~~gi~vn~v~PG~v~t~~~~~~~  202 (264)
T 3ucx_A          163 AKSALLAMSQTLATELGEKGIRVNSVLPGYIWGGTLKSYF  202 (264)
T ss_dssp             HHHHHHHHHHHHHHHHHTTTCEEEEEEESSCBSHHHHHHH
T ss_pred             HHHHHHHHHHHHHHHhCccCeEEEEEecCccccccHHHHH
Confidence            9999999999999999874 99999999999999977654

>3tfo_A Putative 3-oxoacyl-(acyl-carrier-protein) reducta; structural genomics, PSI-biology, NEW YORK structural genomi research consortium; 2.08A {Sinorhizobium meliloti}

Probab=100.00  E-value=8.6e-41  Score=282.21  Aligned_cols=192  Identities=31%  Similarity=0.511  Sum_probs=169.9

Q ss_pred             CCCCEEEEcCCCChHHHHHHHHHHHcCCeEEEEeCCcchHHHHHHHHHhhCCCcEEEEEccCCCHHHHHHHHHHHHhHcC
Q 044010           45 VSGKVVIITGASSGIGEHLAYEYARRGACLALCARREKSLEEVADTAREIGSPDVITIRADVSKVDDCRSLVEETMNHFG  124 (248)
Q Consensus        45 ~~~k~~lVtGg~~gIG~aia~~l~~~G~~V~l~~r~~~~~~~~~~~l~~~~~~~v~~~~~D~~~~~~~~~~~~~~~~~~g  124 (248)
                      +++|++|||||++|||+++|++|+++|++|++++|+.+++++..+++++.+. ++.++.+|++|.++++++++++.+++|
T Consensus         2 l~~k~~lVTGas~GIG~aia~~la~~G~~V~~~~r~~~~~~~~~~~l~~~~~-~~~~~~~Dv~d~~~v~~~~~~~~~~~g   80 (264)
T 3tfo_A            2 VMDKVILITGASGGIGEGIARELGVAGAKILLGARRQARIEAIATEIRDAGG-TALAQVLDVTDRHSVAAFAQAAVDTWG   80 (264)
T ss_dssp             CTTCEEEESSTTSHHHHHHHHHHHHTTCEEEEEESSHHHHHHHHHHHHHTTC-EEEEEECCTTCHHHHHHHHHHHHHHHS
T ss_pred             CCCCEEEEeCCccHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHhcCC-cEEEEEcCCCCHHHHHHHHHHHHHHcC
Confidence            4789999999999999999999999999999999999999998888887654 788999999999999999999999999


Q ss_pred             CccEEEEccccCCcccccccCChHHHHHHHHhhhHHHHHHHHHHhhhhhhc-CCeEEEEcCccccccCCCCccchHHHHH
Q 044010          125 RLDHLVNNAGISSVALFEDIVNITDFKQIMNINFWGSVYTTRFAVPHLRYT-KGKIVVLSSAASWLTAPRMSFYNASKAA  203 (248)
Q Consensus       125 ~id~vv~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~-~g~iV~isS~~~~~~~~~~~~Y~~sKaa  203 (248)
                      ++|++|||||.....++.+ .+.++|++.+++|+.|++.+++.++|.|+++ +|+||++||..+..+.++...|++||+|
T Consensus        81 ~iD~lVnnAG~~~~~~~~~-~~~~~~~~~~~vN~~g~~~l~~~~~~~m~~~~~g~IV~isS~~~~~~~~~~~~Y~asKaa  159 (264)
T 3tfo_A           81 RIDVLVNNAGVMPLSPLAA-VKVDEWERMIDVNIKGVLWGIGAVLPIMEAQRSGQIINIGSIGALSVVPTAAVYCATKFA  159 (264)
T ss_dssp             CCCEEEECCCCCCCCCGGG-CCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEEECCGGGTCCCTTCHHHHHHHHH
T ss_pred             CCCEEEECCCCCCCCCccc-CCHHHHHHHHHHHhHHHHHHHHHHHHHHHhCCCeEEEEEcCHHHcccCCCChhHHHHHHH
Confidence            9999999999987666665 5789999999999999999999999998754 4899999999999999999999999999


Q ss_pred             HHHHHHHHHHHhCCCeEEEEEecCccccCccccccc
Q 044010          204 LVLFFETLRVELGSDVGVTIVTPGFIESELTQGKFL  239 (248)
Q Consensus       204 l~~l~~~la~~~~~~i~v~~v~pg~v~T~~~~~~~~  239 (248)
                      +++|+++++.|+ ++||||+|+||+|+|+|......
T Consensus       160 l~~l~~~la~e~-~gIrvn~v~PG~v~T~~~~~~~~  194 (264)
T 3tfo_A          160 VRAISDGLRQES-TNIRVTCVNPGVVESELAGTITH  194 (264)
T ss_dssp             HHHHHHHHHHHC-SSEEEEEEEECCC----------
T ss_pred             HHHHHHHHHHhC-CCCEEEEEecCCCcCcccccccc
Confidence            999999999998 58999999999999999876543

>3pk0_A Short-chain dehydrogenase/reductase SDR; ssgcid, structural genomics, seattle structural genomics CEN infectious disease; 1.75A {Mycobacterium smegmatis} SCOP: c.2.1.0

Probab=100.00  E-value=7e-41  Score=282.27  Aligned_cols=194  Identities=29%  Similarity=0.469  Sum_probs=178.8

Q ss_pred             cCCCCCEEEEcCCCChHHHHHHHHHHHcCCeEEEEeCCcchHHHHHHHHHhhCCCcEEEEEccCCCHHHHHHHHHHHHhH
Q 044010           43 EDVSGKVVIITGASSGIGEHLAYEYARRGACLALCARREKSLEEVADTAREIGSPDVITIRADVSKVDDCRSLVEETMNH  122 (248)
Q Consensus        43 ~~~~~k~~lVtGg~~gIG~aia~~l~~~G~~V~l~~r~~~~~~~~~~~l~~~~~~~v~~~~~D~~~~~~~~~~~~~~~~~  122 (248)
                      ++++||++|||||++|||+++|++|+++|++|++++|+.++.++..+++++.+..++.++.+|++|.++++++++++.++
T Consensus         6 ~~l~~k~vlVTGas~gIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~   85 (262)
T 3pk0_A            6 FDLQGRSVVVTGGTKGIGRGIATVFARAGANVAVAGRSTADIDACVADLDQLGSGKVIGVQTDVSDRAQCDALAGRAVEE   85 (262)
T ss_dssp             TCCTTCEEEETTCSSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHTTSSSCEEEEECCTTSHHHHHHHHHHHHHH
T ss_pred             cCCCCCEEEEECCCcHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhhCCCcEEEEEcCCCCHHHHHHHHHHHHHH
Confidence            47899999999999999999999999999999999999999999988888776558999999999999999999999999


Q ss_pred             cCCccEEEEccccCCcccccccCChHHHHHHHHhhhHHHHHHHHHHhhhhhhc-CCeEEEEcCcccc-ccCCCCccchHH
Q 044010          123 FGRLDHLVNNAGISSVALFEDIVNITDFKQIMNINFWGSVYTTRFAVPHLRYT-KGKIVVLSSAASW-LTAPRMSFYNAS  200 (248)
Q Consensus       123 ~g~id~vv~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~-~g~iV~isS~~~~-~~~~~~~~Y~~s  200 (248)
                      +|++|++|||||.....++.+ .+.++|++.+++|+.+++++++++.|.|+++ .|+||++||..+. .+.++..+|++|
T Consensus        86 ~g~id~lvnnAg~~~~~~~~~-~~~~~~~~~~~~N~~g~~~~~~~~~~~m~~~~~g~iv~isS~~~~~~~~~~~~~Y~as  164 (262)
T 3pk0_A           86 FGGIDVVCANAGVFPDAPLAT-MTPEQLNGIFAVNVNGTFYAVQACLDALIASGSGRVVLTSSITGPITGYPGWSHYGAT  164 (262)
T ss_dssp             HSCCSEEEECCCCCCCCCTTT-CCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHSSCEEEEECCSBTTTBCCTTCHHHHHH
T ss_pred             hCCCCEEEECCCCCCCCChhh-CCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcCCcEEEEEechhhccCCCCCChhhHHH
Confidence            999999999999887666665 5789999999999999999999999999754 4899999999986 788899999999


Q ss_pred             HHHHHHHHHHHHHHhCC-CeEEEEEecCccccCccccc
Q 044010          201 KAALVLFFETLRVELGS-DVGVTIVTPGFIESELTQGK  237 (248)
Q Consensus       201 Kaal~~l~~~la~~~~~-~i~v~~v~pg~v~T~~~~~~  237 (248)
                      |+++++|+++++.|+++ +||||+|+||+++|++....
T Consensus       165 K~a~~~l~~~la~e~~~~gi~vn~v~PG~v~t~~~~~~  202 (262)
T 3pk0_A          165 KAAQLGFMRTAAIELAPHKITVNAIMPGNIMTEGLLEN  202 (262)
T ss_dssp             HHHHHHHHHHHHHHHGGGTCEEEEEEECSBCCHHHHTT
T ss_pred             HHHHHHHHHHHHHHHHhhCcEEEEEEeCcCcCcccccc
Confidence            99999999999999987 49999999999999986543

>4dry_A 3-oxoacyl-[acyl-carrier-protein] reductase; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; 2.50A {Sinorhizobium meliloti}

Probab=100.00  E-value=7.6e-41  Score=284.93  Aligned_cols=195  Identities=22%  Similarity=0.332  Sum_probs=169.6

Q ss_pred             cCCCCCEEEEcCCCChHHHHHHHHHHHcCCeEEEEeCCcchHHHHHHHHHhhCCCcEEEEEccCCCHHHHHHHHHHHHhH
Q 044010           43 EDVSGKVVIITGASSGIGEHLAYEYARRGACLALCARREKSLEEVADTAREIGSPDVITIRADVSKVDDCRSLVEETMNH  122 (248)
Q Consensus        43 ~~~~~k~~lVtGg~~gIG~aia~~l~~~G~~V~l~~r~~~~~~~~~~~l~~~~~~~v~~~~~D~~~~~~~~~~~~~~~~~  122 (248)
                      .+++||++|||||++|||+++|++|+++|++|++++|+.++.++..+++.+.++..+.++.+|++|.++++++++++.++
T Consensus        29 ~~l~gk~~lVTGas~GIG~aia~~la~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~Dv~d~~~v~~~~~~~~~~  108 (281)
T 4dry_A           29 GSGEGRIALVTGGGTGVGRGIAQALSAEGYSVVITGRRPDVLDAAAGEIGGRTGNIVRAVVCDVGDPDQVAALFAAVRAE  108 (281)
T ss_dssp             -----CEEEETTTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHHHSSCEEEEECCTTCHHHHHHHHHHHHHH
T ss_pred             CCCCCCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHhcCCCeEEEEEcCCCCHHHHHHHHHHHHHH
Confidence            46899999999999999999999999999999999999999888888887766545689999999999999999999999


Q ss_pred             cCCccEEEEccccCCc-ccccccCChHHHHHHHHhhhHHHHHHHHHHhhhhhhc---CCeEEEEcCccccccCCCCccch
Q 044010          123 FGRLDHLVNNAGISSV-ALFEDIVNITDFKQIMNINFWGSVYTTRFAVPHLRYT---KGKIVVLSSAASWLTAPRMSFYN  198 (248)
Q Consensus       123 ~g~id~vv~~ag~~~~-~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~---~g~iV~isS~~~~~~~~~~~~Y~  198 (248)
                      +|++|++|||||.... .++.+ .+.++|++.+++|+.+++.+++++.|.|.++   +|+||++||..+..+.++...|+
T Consensus       109 ~g~iD~lvnnAG~~~~~~~~~~-~~~~~~~~~~~vN~~g~~~~~~~~~~~~~~~~~~~g~IV~isS~~~~~~~~~~~~Y~  187 (281)
T 4dry_A          109 FARLDLLVNNAGSNVPPVPLEE-VTFEQWNGIVAANLTGAFLCTQHAFRMMKAQTPRGGRIINNGSISAQTPRPNSAPYT  187 (281)
T ss_dssp             HSCCSEEEECCCCCCCCCCGGG-CCHHHHHHHHHHHTHHHHHHHHHHHHHHHHSSSCCEEEEEECCGGGTCCCTTCHHHH
T ss_pred             cCCCCEEEECCCCCCCCCCccc-CCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcCCCCcEEEEECCHHhCCCCCCChhHH
Confidence            9999999999998755 34444 6889999999999999999999999999765   48999999999999999999999


Q ss_pred             HHHHHHHHHHHHHHHHhCCC-eEEEEEecCccccCcccccc
Q 044010          199 ASKAALVLFFETLRVELGSD-VGVTIVTPGFIESELTQGKF  238 (248)
Q Consensus       199 ~sKaal~~l~~~la~~~~~~-i~v~~v~pg~v~T~~~~~~~  238 (248)
                      +||+|+++|+++++.|+++. ||||+|+||+|+|+|.+...
T Consensus       188 asKaa~~~l~~~la~e~~~~gI~vn~v~PG~v~T~~~~~~~  228 (281)
T 4dry_A          188 ATKHAITGLTKSTALDGRMHDIACGQIDIGNAATDMTARMS  228 (281)
T ss_dssp             HHHHHHHHHHHHHHHHHGGGTEEEEEEEEECBCC-------
T ss_pred             HHHHHHHHHHHHHHHHhcccCeEEEEEEECcCcChhhhhhc
Confidence            99999999999999999874 99999999999999987653

>3v8b_A Putative dehydrogenase, possibly 3-oxoacyl-[acyl- protein] reductase; PSI-biology, structural genomics, protein structure initiati nysgrc; 2.70A {Sinorhizobium meliloti}

Probab=100.00  E-value=2e-40  Score=282.64  Aligned_cols=193  Identities=35%  Similarity=0.521  Sum_probs=174.3

Q ss_pred             cCCCCCEEEEcCCCChHHHHHHHHHHHcCCeEEEEeCCcchHHHHHHHHHhhCCCcEEEEEccCCCHHHHHHHHHHHHhH
Q 044010           43 EDVSGKVVIITGASSGIGEHLAYEYARRGACLALCARREKSLEEVADTAREIGSPDVITIRADVSKVDDCRSLVEETMNH  122 (248)
Q Consensus        43 ~~~~~k~~lVtGg~~gIG~aia~~l~~~G~~V~l~~r~~~~~~~~~~~l~~~~~~~v~~~~~D~~~~~~~~~~~~~~~~~  122 (248)
                      +++++|++|||||++|||+++|++|+++|++|++++|+.+++++..+++.+.+. ++.++.+|++|.++++++++++.++
T Consensus        24 ~~~~~k~~lVTGas~GIG~aia~~la~~G~~V~~~~r~~~~~~~~~~~l~~~~~-~~~~~~~Dv~d~~~v~~~~~~~~~~  102 (283)
T 3v8b_A           24 MNQPSPVALITGAGSGIGRATALALAADGVTVGALGRTRTEVEEVADEIVGAGG-QAIALEADVSDELQMRNAVRDLVLK  102 (283)
T ss_dssp             ---CCCEEEEESCSSHHHHHHHHHHHHTTCEEEEEESSHHHHHHHHHHHTTTTC-CEEEEECCTTCHHHHHHHHHHHHHH
T ss_pred             cCCCCCEEEEECCCCHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcCC-cEEEEEccCCCHHHHHHHHHHHHHH
Confidence            478899999999999999999999999999999999999988888888876554 7899999999999999999999999


Q ss_pred             cCCccEEEEccccCCc-ccccccCChHHHHHHHHhhhHHHHHHHHHHhhhhhhc-CCeEEEEcCccccc--cCCCCccch
Q 044010          123 FGRLDHLVNNAGISSV-ALFEDIVNITDFKQIMNINFWGSVYTTRFAVPHLRYT-KGKIVVLSSAASWL--TAPRMSFYN  198 (248)
Q Consensus       123 ~g~id~vv~~ag~~~~-~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~-~g~iV~isS~~~~~--~~~~~~~Y~  198 (248)
                      +|++|++|||||.... .++.+ .+.++|++.+++|+.+++.+++.+.|.|+++ .|+||++||.++..  +.++..+|+
T Consensus       103 ~g~iD~lVnnAg~~~~~~~~~~-~~~~~~~~~~~vN~~g~~~l~~~~~~~m~~~~~g~Iv~isS~~~~~~~~~~~~~~Y~  181 (283)
T 3v8b_A          103 FGHLDIVVANAGINGVWAPIDD-LKPFEWDETIAVNLRGTFLTLHLTVPYLKQRGGGAIVVVSSINGTRTFTTPGATAYT  181 (283)
T ss_dssp             HSCCCEEEECCCCCCCBCCTTT-SCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEEECCSBTTTBCCSTTCHHHH
T ss_pred             hCCCCEEEECCCCCCCCCchhh-CCHHHHHHHHHHHhHHHHHHHHHHHHHHHHcCCceEEEEcChhhccCCCCCCchHHH
Confidence            9999999999998654 44444 6789999999999999999999999999754 48999999999887  778889999


Q ss_pred             HHHHHHHHHHHHHHHHhCCC-eEEEEEecCccccCccccc
Q 044010          199 ASKAALVLFFETLRVELGSD-VGVTIVTPGFIESELTQGK  237 (248)
Q Consensus       199 ~sKaal~~l~~~la~~~~~~-i~v~~v~pg~v~T~~~~~~  237 (248)
                      +||+|+++++++++.|+++. ||||+|+||+|+|+|....
T Consensus       182 asKaa~~~l~~~la~e~~~~gI~vn~v~PG~v~T~~~~~~  221 (283)
T 3v8b_A          182 ATKAAQVAIVQQLALELGKHHIRVNAVCPGAIETNISDNT  221 (283)
T ss_dssp             HHHHHHHHHHHHHHHHTTTTTEEEEEEEECSBSSCTTCCT
T ss_pred             HHHHHHHHHHHHHHHHhCccCcEEEEEEeCCCcCCccccc
Confidence            99999999999999999875 9999999999999998754

>3op4_A 3-oxoacyl-[acyl-carrier protein] reductase; 3-ketoacyl-(acyl-carrier-protein) reductase; HET: MSE NAP; 1.60A {Vibrio cholerae o1 biovar el tor} SCOP: c.2.1.2 PDB: 3rsh_A* 3rro_A* 4i08_A* 3tzk_A 3tzc_A* 3u09_A 3tzh_A 1q7b_A* 1i01_A* 1q7c_A* 2cf2_E

Probab=100.00  E-value=1.2e-40  Score=278.73  Aligned_cols=190  Identities=27%  Similarity=0.431  Sum_probs=174.4

Q ss_pred             cCCCCCEEEEcCCCChHHHHHHHHHHHcCCeEEEEeCCcchHHHHHHHHHhhCCCcEEEEEccCCCHHHHHHHHHHHHhH
Q 044010           43 EDVSGKVVIITGASSGIGEHLAYEYARRGACLALCARREKSLEEVADTAREIGSPDVITIRADVSKVDDCRSLVEETMNH  122 (248)
Q Consensus        43 ~~~~~k~~lVtGg~~gIG~aia~~l~~~G~~V~l~~r~~~~~~~~~~~l~~~~~~~v~~~~~D~~~~~~~~~~~~~~~~~  122 (248)
                      ++++||++|||||++|||+++|++|+++|++|++++|+.++.++..+++..    +...+.+|++|.++++++++++.++
T Consensus         5 ~~l~gk~~lVTGas~gIG~a~a~~l~~~G~~V~~~~r~~~~~~~~~~~~~~----~~~~~~~Dv~d~~~v~~~~~~~~~~   80 (248)
T 3op4_A            5 MNLEGKVALVTGASRGIGKAIAELLAERGAKVIGTATSESGAQAISDYLGD----NGKGMALNVTNPESIEAVLKAITDE   80 (248)
T ss_dssp             TCCTTCEEEESSCSSHHHHHHHHHHHHTTCEEEEEESSHHHHHHHHHHHGG----GEEEEECCTTCHHHHHHHHHHHHHH
T ss_pred             cCCCCCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHhcc----cceEEEEeCCCHHHHHHHHHHHHHH
Confidence            578999999999999999999999999999999999999888777776643    5678999999999999999999999


Q ss_pred             cCCccEEEEccccCCcccccccCChHHHHHHHHhhhHHHHHHHHHHhhhhhhc-CCeEEEEcCccccccCCCCccchHHH
Q 044010          123 FGRLDHLVNNAGISSVALFEDIVNITDFKQIMNINFWGSVYTTRFAVPHLRYT-KGKIVVLSSAASWLTAPRMSFYNASK  201 (248)
Q Consensus       123 ~g~id~vv~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~-~g~iV~isS~~~~~~~~~~~~Y~~sK  201 (248)
                      +|++|++|||||.....++.+ .+.++|++.+++|+.++++++++++|.|.++ .|+||++||..+..+.++..+|++||
T Consensus        81 ~g~iD~lv~nAg~~~~~~~~~-~~~~~~~~~~~vN~~g~~~~~~~~~~~m~~~~~g~iv~isS~~~~~~~~~~~~Y~asK  159 (248)
T 3op4_A           81 FGGVDILVNNAGITRDNLLMR-MKEEEWSDIMETNLTSIFRLSKAVLRGMMKKRQGRIINVGSVVGTMGNAGQANYAAAK  159 (248)
T ss_dssp             HCCCSEEEECCCCCCCCCGGG-CCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEEECCHHHHHCCTTCHHHHHHH
T ss_pred             cCCCCEEEECCCCCCCCChhh-CCHHHHHHHHHHhhHHHHHHHHHHHHHHHHcCCCEEEEEcchhhcCCCCCChHHHHHH
Confidence            999999999999887766555 5789999999999999999999999998754 58999999999999999999999999


Q ss_pred             HHHHHHHHHHHHHhCCC-eEEEEEecCccccCccccc
Q 044010          202 AALVLFFETLRVELGSD-VGVTIVTPGFIESELTQGK  237 (248)
Q Consensus       202 aal~~l~~~la~~~~~~-i~v~~v~pg~v~T~~~~~~  237 (248)
                      +|+++|+++++.|+++. ||||+|+||+++|++.+..
T Consensus       160 ~a~~~l~~~la~e~~~~gi~vn~v~PG~v~T~~~~~~  196 (248)
T 3op4_A          160 AGVIGFTKSMAREVASRGVTVNTVAPGFIETDMTKAL  196 (248)
T ss_dssp             HHHHHHHHHHHHHHGGGTEEEEEEEECSBSSTTTTTS
T ss_pred             HHHHHHHHHHHHHHHHhCeEEEEEeeCCCCCchhhhc
Confidence            99999999999999874 9999999999999998754

>3uve_A Carveol dehydrogenase ((+)-trans-carveol dehydrog; ssgcid, structural genomics, seattle structural genomics CEN infectious disease; HET: NAD PG4; 1.55A {Mycobacterium avium} SCOP: c.2.1.0 PDB: 3uwr_A*

Probab=100.00  E-value=2.1e-40  Score=282.44  Aligned_cols=195  Identities=29%  Similarity=0.432  Sum_probs=174.4

Q ss_pred             cccCCCCCEEEEcCCCChHHHHHHHHHHHcCCeEEEEeCC----------------cchHHHHHHHHHhhCCCcEEEEEc
Q 044010           41 FSEDVSGKVVIITGASSGIGEHLAYEYARRGACLALCARR----------------EKSLEEVADTAREIGSPDVITIRA  104 (248)
Q Consensus        41 ~~~~~~~k~~lVtGg~~gIG~aia~~l~~~G~~V~l~~r~----------------~~~~~~~~~~l~~~~~~~v~~~~~  104 (248)
                      +..+++||++|||||++|||+++|++|+++|++|++++|+                .+++++..++++..+ .++.++.+
T Consensus         5 m~~~l~~k~~lVTGas~gIG~aia~~la~~G~~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~   83 (286)
T 3uve_A            5 MTGRVEGKVAFVTGAARGQGRSHAVRLAQEGADIIAVDICKPIRAGVVDTAIPASTPEDLAETADLVKGHN-RRIVTAEV   83 (286)
T ss_dssp             -CCTTTTCEEEEESTTSHHHHHHHHHHHHTTCEEEEEECCSCSBTTBCCCSSCCCCHHHHHHHHHHHHTTT-CCEEEEEC
T ss_pred             CCcccCCCEEEEeCCCchHHHHHHHHHHHCCCeEEEEeccccccccccccccccCCHHHHHHHHHHHhhcC-CceEEEEc
Confidence            4567899999999999999999999999999999999987                455666666666554 47999999


Q ss_pred             cCCCHHHHHHHHHHHHhHcCCccEEEEccccCCcccccccCChHHHHHHHHhhhHHHHHHHHHHhhhhhhc--CCeEEEE
Q 044010          105 DVSKVDDCRSLVEETMNHFGRLDHLVNNAGISSVALFEDIVNITDFKQIMNINFWGSVYTTRFAVPHLRYT--KGKIVVL  182 (248)
Q Consensus       105 D~~~~~~~~~~~~~~~~~~g~id~vv~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~--~g~iV~i  182 (248)
                      |++|.++++++++++.+++|++|++|||||........++.+.++|++.+++|+.+++++++++.|.|.++  +|+||++
T Consensus        84 Dv~~~~~v~~~~~~~~~~~g~id~lv~nAg~~~~~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~~~~~~~~g~iv~i  163 (286)
T 3uve_A           84 DVRDYDALKAAVDSGVEQLGRLDIIVANAGIGNGGDTLDKTSEEDWTEMIDINLAGVWKTVKAGVPHMIAGGRGGSIILT  163 (286)
T ss_dssp             CTTCHHHHHHHHHHHHHHHSCCCEEEECCCCCCCCSCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTSCEEEEEE
T ss_pred             CCCCHHHHHHHHHHHHHHhCCCCEEEECCcccCCCCccccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhCCCCcEEEEE
Confidence            99999999999999999999999999999987765533346889999999999999999999999998753  4899999


Q ss_pred             cCccccccCCCCccchHHHHHHHHHHHHHHHHhCCC-eEEEEEecCccccCcccc
Q 044010          183 SSAASWLTAPRMSFYNASKAALVLFFETLRVELGSD-VGVTIVTPGFIESELTQG  236 (248)
Q Consensus       183 sS~~~~~~~~~~~~Y~~sKaal~~l~~~la~~~~~~-i~v~~v~pg~v~T~~~~~  236 (248)
                      ||..+..+.++...|++||+|+++|+++++.|+++. ||||+|+||+|+|+|.+.
T Consensus       164 sS~~~~~~~~~~~~Y~asKaa~~~~~~~la~e~~~~gI~vn~v~PG~v~T~~~~~  218 (286)
T 3uve_A          164 SSVGGLKAYPHTGHYVAAKHGVVGLMRAFGVELGQHMIRVNSVHPTHVKTPMLHN  218 (286)
T ss_dssp             CCGGGTSCCTTCHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEESSBSSTTTSS
T ss_pred             CchhhccCCCCccHHHHHHHHHHHHHHHHHHHhcccCeEEEEEecCcccCCcccc
Confidence            999999999999999999999999999999999874 999999999999999864

>4ibo_A Gluconate dehydrogenase; enzyme function initiative structural genomics, oxidoreductase; 2.10A {Agrobacterium fabrum}

Probab=100.00  E-value=1.1e-40  Score=282.43  Aligned_cols=194  Identities=21%  Similarity=0.335  Sum_probs=179.8

Q ss_pred             ccCCCCCEEEEcCCCChHHHHHHHHHHHcCCeEEEEeCCcchHHHHHHHHHhhCCCcEEEEEccCCCHHHHHHHHHHHHh
Q 044010           42 SEDVSGKVVIITGASSGIGEHLAYEYARRGACLALCARREKSLEEVADTAREIGSPDVITIRADVSKVDDCRSLVEETMN  121 (248)
Q Consensus        42 ~~~~~~k~~lVtGg~~gIG~aia~~l~~~G~~V~l~~r~~~~~~~~~~~l~~~~~~~v~~~~~D~~~~~~~~~~~~~~~~  121 (248)
                      ..+++||++|||||++|||+++|++|+++|++|++++|+.++.++..+++++.+. ++.++.+|++|.++++++++++.+
T Consensus        21 ~~~l~gk~~lVTGas~gIG~aia~~la~~G~~V~~~~r~~~~~~~~~~~l~~~~~-~~~~~~~Dv~d~~~v~~~~~~~~~   99 (271)
T 4ibo_A           21 IFDLGGRTALVTGSSRGLGRAMAEGLAVAGARILINGTDPSRVAQTVQEFRNVGH-DAEAVAFDVTSESEIIEAFARLDE   99 (271)
T ss_dssp             GGCCTTCEEEETTCSSHHHHHHHHHHHHTTCEEEECCSCHHHHHHHHHHHHHTTC-CEEECCCCTTCHHHHHHHHHHHHH
T ss_pred             ccCCCCCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcCC-ceEEEEcCCCCHHHHHHHHHHHHH
Confidence            3578999999999999999999999999999999999999999999888877664 789999999999999999999999


Q ss_pred             HcCCccEEEEccccCCcccccccCChHHHHHHHHhhhHHHHHHHHHHhhhhhhc-CCeEEEEcCccccccCCCCccchHH
Q 044010          122 HFGRLDHLVNNAGISSVALFEDIVNITDFKQIMNINFWGSVYTTRFAVPHLRYT-KGKIVVLSSAASWLTAPRMSFYNAS  200 (248)
Q Consensus       122 ~~g~id~vv~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~-~g~iV~isS~~~~~~~~~~~~Y~~s  200 (248)
                      ++|++|++|||||.....++.+ .+.++|++.+++|+.+++++++++.|.|.++ .|+||++||..+..+.++..+|++|
T Consensus       100 ~~g~iD~lv~nAg~~~~~~~~~-~~~~~~~~~~~vN~~g~~~l~~~~~~~~~~~~~g~iV~isS~~~~~~~~~~~~Y~as  178 (271)
T 4ibo_A          100 QGIDVDILVNNAGIQFRKPMIE-LETADWQRVIDTNLTSAFMIGREAAKRMIPRGYGKIVNIGSLTSELARATVAPYTVA  178 (271)
T ss_dssp             HTCCCCEEEECCCCCCCCCGGG-CCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEEECCGGGTSBCTTCHHHHHH
T ss_pred             HCCCCCEEEECCCCCCCCCchh-CCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcCCcEEEEEccHHhCCCCCCchhHHHH
Confidence            9999999999999887766665 5789999999999999999999999998754 4899999999999999999999999


Q ss_pred             HHHHHHHHHHHHHHhCC-CeEEEEEecCccccCccccc
Q 044010          201 KAALVLFFETLRVELGS-DVGVTIVTPGFIESELTQGK  237 (248)
Q Consensus       201 Kaal~~l~~~la~~~~~-~i~v~~v~pg~v~T~~~~~~  237 (248)
                      |+|+++|+++++.|+++ +||||+|+||+++|+|.+..
T Consensus       179 Kaa~~~l~~~la~e~~~~gI~vn~v~PG~v~T~~~~~~  216 (271)
T 4ibo_A          179 KGGIKMLTRAMAAEWAQYGIQANAIGPGYMLTDMNQAL  216 (271)
T ss_dssp             HHHHHHHHHHHHHHHGGGTEEEEEEEECSBCSGGGHHH
T ss_pred             HHHHHHHHHHHHHHHhhhCeEEEEEEeccEeCcchhhc
Confidence            99999999999999987 49999999999999998754

>2jah_A Clavulanic acid dehydrogenase; short-chain dehydrogenase/reductase, lactamase inhibitor, AN biosynthesis, NADPH, oxidoreductase; HET: MSE NDP; 1.80A {Streptomyces clavuligerus} PDB: 2jap_A*

Probab=100.00  E-value=3.2e-40  Score=275.85  Aligned_cols=193  Identities=38%  Similarity=0.560  Sum_probs=176.7

Q ss_pred             cCCCCCEEEEcCCCChHHHHHHHHHHHcCCeEEEEeCCcchHHHHHHHHHhhCCCcEEEEEccCCCHHHHHHHHHHHHhH
Q 044010           43 EDVSGKVVIITGASSGIGEHLAYEYARRGACLALCARREKSLEEVADTAREIGSPDVITIRADVSKVDDCRSLVEETMNH  122 (248)
Q Consensus        43 ~~~~~k~~lVtGg~~gIG~aia~~l~~~G~~V~l~~r~~~~~~~~~~~l~~~~~~~v~~~~~D~~~~~~~~~~~~~~~~~  122 (248)
                      .++++|++|||||++|||++++++|+++|++|++++|+.++.++..+++++.+. ++.++.+|++|.++++++++++.++
T Consensus         3 ~~l~~k~~lVTGas~gIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~l~~~~~-~~~~~~~Dv~~~~~~~~~~~~~~~~   81 (247)
T 2jah_A            3 SALQGKVALITGASSGIGEATARALAAEGAAVAIAARRVEKLRALGDELTAAGA-KVHVLELDVADRQGVDAAVASTVEA   81 (247)
T ss_dssp             CTTTTCEEEEESCSSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHTTC-CEEEEECCTTCHHHHHHHHHHHHHH
T ss_pred             ccCCCCEEEEECCCCHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHhcCC-cEEEEECCCCCHHHHHHHHHHHHHH
Confidence            468899999999999999999999999999999999999888888888876543 7889999999999999999999999


Q ss_pred             cCCccEEEEccccCCcccccccCChHHHHHHHHhhhHHHHHHHHHHhhhhhhcCCeEEEEcCccccccCCCCccchHHHH
Q 044010          123 FGRLDHLVNNAGISSVALFEDIVNITDFKQIMNINFWGSVYTTRFAVPHLRYTKGKIVVLSSAASWLTAPRMSFYNASKA  202 (248)
Q Consensus       123 ~g~id~vv~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~g~iV~isS~~~~~~~~~~~~Y~~sKa  202 (248)
                      +|++|++|||||.....++.+ .+.++|++.+++|+.+++++++++.|.|.+++|+||++||..+..+.++...|++||+
T Consensus        82 ~g~id~lv~nAg~~~~~~~~~-~~~~~~~~~~~~N~~g~~~~~~~~~~~~~~~~g~iv~isS~~~~~~~~~~~~Y~asK~  160 (247)
T 2jah_A           82 LGGLDILVNNAGIMLLGPVED-ADTTDWTRMIDTNLLGLMYMTRAALPHLLRSKGTVVQMSSIAGRVNVRNAAVYQATKF  160 (247)
T ss_dssp             HSCCSEEEECCCCCCCCCSTT-CCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEECCGGGTCCCTTCHHHHHHHH
T ss_pred             cCCCCEEEECCCCCCCCchhh-CCHHHHHHHHHHHhHHHHHHHHHHHHHHHHCCCEEEEEccHHhcCCCCCCcHHHHHHH
Confidence            999999999999876655555 5789999999999999999999999999755599999999999999899999999999


Q ss_pred             HHHHHHHHHHHHhCC-CeEEEEEecCccccCccccc
Q 044010          203 ALVLFFETLRVELGS-DVGVTIVTPGFIESELTQGK  237 (248)
Q Consensus       203 al~~l~~~la~~~~~-~i~v~~v~pg~v~T~~~~~~  237 (248)
                      ++++++++++.|+++ +||||+|+||+++|+|....
T Consensus       161 a~~~~~~~la~e~~~~gi~v~~v~PG~v~T~~~~~~  196 (247)
T 2jah_A          161 GVNAFSETLRQEVTERGVRVVVIEPGTTDTELRGHI  196 (247)
T ss_dssp             HHHHHHHHHHHHHGGGTCEEEEEEECSBSSSGGGGC
T ss_pred             HHHHHHHHHHHHhcccCcEEEEEECCCCCCcchhcc
Confidence            999999999999987 59999999999999997643

>4egf_A L-xylulose reductase; structural genomics, ssgcid, seattle structural genomics CEN infectious disease, oxidoreductase; 2.30A {Mycobacterium smegmatis}

Probab=100.00  E-value=8.3e-41  Score=282.43  Aligned_cols=195  Identities=30%  Similarity=0.395  Sum_probs=179.5

Q ss_pred             cCCCCCEEEEcCCCChHHHHHHHHHHHcCCeEEEEeCCcchHHHHHHHHHhhCCCcEEEEEccCCCHHHHHHHHHHHHhH
Q 044010           43 EDVSGKVVIITGASSGIGEHLAYEYARRGACLALCARREKSLEEVADTAREIGSPDVITIRADVSKVDDCRSLVEETMNH  122 (248)
Q Consensus        43 ~~~~~k~~lVtGg~~gIG~aia~~l~~~G~~V~l~~r~~~~~~~~~~~l~~~~~~~v~~~~~D~~~~~~~~~~~~~~~~~  122 (248)
                      ++++||++|||||++|||+++|++|+++|++|++++|+.+++++..+++.+..+.++.++.+|++|.++++++++++.++
T Consensus        16 ~~l~~k~vlVTGas~gIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~   95 (266)
T 4egf_A           16 LRLDGKRALITGATKGIGADIARAFAAAGARLVLSGRDVSELDAARRALGEQFGTDVHTVAIDLAEPDAPAELARRAAEA   95 (266)
T ss_dssp             GCCTTCEEEETTTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHHHCCCEEEEECCTTSTTHHHHHHHHHHHH
T ss_pred             cCCCCCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHHhcCCcEEEEEecCCCHHHHHHHHHHHHHH
Confidence            47899999999999999999999999999999999999999988888887744458999999999999999999999999


Q ss_pred             cCCccEEEEccccCCcccccccCChHHHHHHHHhhhHHHHHHHHHHhhhhhhc--CCeEEEEcCccccccCCCCccchHH
Q 044010          123 FGRLDHLVNNAGISSVALFEDIVNITDFKQIMNINFWGSVYTTRFAVPHLRYT--KGKIVVLSSAASWLTAPRMSFYNAS  200 (248)
Q Consensus       123 ~g~id~vv~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~--~g~iV~isS~~~~~~~~~~~~Y~~s  200 (248)
                      +|++|++|||||...+.++.+ .+.++|++.+++|+.+++++++++.|.|.++  +|+||++||..+..+.++..+|++|
T Consensus        96 ~g~id~lv~nAg~~~~~~~~~-~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~~~~g~iv~isS~~~~~~~~~~~~Y~as  174 (266)
T 4egf_A           96 FGGLDVLVNNAGISHPQPVVD-TDPQLFDATIAVNLRAPALLASAVGKAMVAAGEGGAIITVASAAALAPLPDHYAYCTS  174 (266)
T ss_dssp             HTSCSEEEEECCCCCCCCGGG-CCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTSCEEEEEECCGGGTSCCTTCHHHHHH
T ss_pred             cCCCCEEEECCCcCCCCChhh-CCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcCCCeEEEEEcchhhccCCCCChHHHHH
Confidence            999999999999987766665 5789999999999999999999999998754  4899999999999999999999999


Q ss_pred             HHHHHHHHHHHHHHhCCC-eEEEEEecCccccCcccccc
Q 044010          201 KAALVLFFETLRVELGSD-VGVTIVTPGFIESELTQGKF  238 (248)
Q Consensus       201 Kaal~~l~~~la~~~~~~-i~v~~v~pg~v~T~~~~~~~  238 (248)
                      |+|+++|+++++.|+++. ||||+|+||+|+|+|.+..+
T Consensus       175 K~a~~~l~~~la~e~~~~gI~vn~v~PG~v~T~~~~~~~  213 (266)
T 4egf_A          175 KAGLVMATKVLARELGPHGIRANSVCPTVVLTEMGQRVW  213 (266)
T ss_dssp             HHHHHHHHHHHHHHHGGGTEEEEEEEESCBCSHHHHHHT
T ss_pred             HHHHHHHHHHHHHHHhhhCeEEEEEEeCCCcCchhhhhc
Confidence            999999999999999874 99999999999999976543

>3tsc_A Putative oxidoreductase; structural genomics, seattle structural genomics center for infectious disease, ssgcid, nucleotide; HET: NAD; 2.05A {Mycobacterium avium subsp} SCOP: c.2.1.0

Probab=100.00  E-value=3e-40  Score=280.41  Aligned_cols=194  Identities=29%  Similarity=0.460  Sum_probs=174.5

Q ss_pred             cccCCCCCEEEEcCCCChHHHHHHHHHHHcCCeEEEEeC-------------CcchHHHHHHHHHhhCCCcEEEEEccCC
Q 044010           41 FSEDVSGKVVIITGASSGIGEHLAYEYARRGACLALCAR-------------REKSLEEVADTAREIGSPDVITIRADVS  107 (248)
Q Consensus        41 ~~~~~~~k~~lVtGg~~gIG~aia~~l~~~G~~V~l~~r-------------~~~~~~~~~~~l~~~~~~~v~~~~~D~~  107 (248)
                      +..+++||++|||||++|||+++|++|+++|++|++++|             +.++.++..++++..+. ++.++.+|++
T Consensus         5 m~~~l~~k~~lVTGas~GIG~a~a~~la~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~D~~   83 (277)
T 3tsc_A            5 MAGKLEGRVAFITGAARGQGRAHAVRMAAEGADIIAVDIAGKLPSCVPYDPASPDDLSETVRLVEAANR-RIVAAVVDTR   83 (277)
T ss_dssp             --CTTTTCEEEEESTTSHHHHHHHHHHHHTTCEEEEEECCSCCCTTCCSCCCCHHHHHHHHHHHHHTTC-CEEEEECCTT
T ss_pred             cccccCCCEEEEECCccHHHHHHHHHHHHcCCEEEEEeccccccccccccccCHHHHHHHHHHHHhcCC-eEEEEECCCC
Confidence            445799999999999999999999999999999999998             45566666666665554 7899999999


Q ss_pred             CHHHHHHHHHHHHhHcCCccEEEEccccCCcccccccCChHHHHHHHHhhhHHHHHHHHHHhhhhhhc--CCeEEEEcCc
Q 044010          108 KVDDCRSLVEETMNHFGRLDHLVNNAGISSVALFEDIVNITDFKQIMNINFWGSVYTTRFAVPHLRYT--KGKIVVLSSA  185 (248)
Q Consensus       108 ~~~~~~~~~~~~~~~~g~id~vv~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~--~g~iV~isS~  185 (248)
                      |.++++++++++.+++|++|++|||||.....++.+ .+.++|++.+++|+.++++++++++|.|.++  +|+||++||.
T Consensus        84 ~~~~v~~~~~~~~~~~g~id~lvnnAg~~~~~~~~~-~~~~~~~~~~~vN~~g~~~l~~~~~~~~~~~~~~g~iv~isS~  162 (277)
T 3tsc_A           84 DFDRLRKVVDDGVAALGRLDIIVANAGVAAPQAWDD-ITPEDFRDVMDINVTGTWNTVMAGAPRIIEGGRGGSIILISSA  162 (277)
T ss_dssp             CHHHHHHHHHHHHHHHSCCCEEEECCCCCCCCCGGG-CCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTSCEEEEEECCG
T ss_pred             CHHHHHHHHHHHHHHcCCCCEEEECCCCCCCCChhh-CCHHHHHHHHHHhHHHHHHHHHHHHHHHHhcCCCCEEEEEccH
Confidence            999999999999999999999999999987766655 5789999999999999999999999998754  4899999999


Q ss_pred             cccccCCCCccchHHHHHHHHHHHHHHHHhCC-CeEEEEEecCccccCcccc
Q 044010          186 ASWLTAPRMSFYNASKAALVLFFETLRVELGS-DVGVTIVTPGFIESELTQG  236 (248)
Q Consensus       186 ~~~~~~~~~~~Y~~sKaal~~l~~~la~~~~~-~i~v~~v~pg~v~T~~~~~  236 (248)
                      .+..+.++..+|++||+|+++|+++++.|+++ +||||+|+||+|+|+|.+.
T Consensus       163 ~~~~~~~~~~~Y~asKaa~~~~~~~la~e~~~~gi~vn~v~PG~v~T~~~~~  214 (277)
T 3tsc_A          163 AGMKMQPFMIHYTASKHAVTGLARAFAAELGKHSIRVNSVHPGPVNTPMGSG  214 (277)
T ss_dssp             GGTSCCSSCHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEESSBSSGGGSH
T ss_pred             hhCCCCCCchhhHHHHHHHHHHHHHHHHHhCccCeEEEEEEeCCCcCCcccc
Confidence            99999999999999999999999999999987 4999999999999999764

>3l6e_A Oxidoreductase, short-chain dehydrogenase/reducta; structural genomics, PSI-2, protein structure initiative; 2.30A {Aeromonas hydrophila subsp} SCOP: c.2.1.0

Probab=100.00  E-value=1.5e-40  Score=276.04  Aligned_cols=188  Identities=23%  Similarity=0.298  Sum_probs=165.9

Q ss_pred             CCCCEEEEcCCCChHHHHHHHHHHHcCCeEEEEeCCcchHHHHHHHHHhhCCCcEEEEEccCCCHHHHHHHHHHHHhHcC
Q 044010           45 VSGKVVIITGASSGIGEHLAYEYARRGACLALCARREKSLEEVADTAREIGSPDVITIRADVSKVDDCRSLVEETMNHFG  124 (248)
Q Consensus        45 ~~~k~~lVtGg~~gIG~aia~~l~~~G~~V~l~~r~~~~~~~~~~~l~~~~~~~v~~~~~D~~~~~~~~~~~~~~~~~~g  124 (248)
                      |++|++|||||++|||+++|++|+++|++|++++|+.+++++..+++.    .++.++.+|++|.++++++++++.+++|
T Consensus         1 Ms~k~vlVTGas~GIG~a~a~~l~~~G~~V~~~~r~~~~~~~~~~~~~----~~~~~~~~D~~~~~~v~~~~~~~~~~~g   76 (235)
T 3l6e_A            1 MSLGHIIVTGAGSGLGRALTIGLVERGHQVSMMGRRYQRLQQQELLLG----NAVIGIVADLAHHEDVDVAFAAAVEWGG   76 (235)
T ss_dssp             --CCEEEEESTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHG----GGEEEEECCTTSHHHHHHHHHHHHHHHC
T ss_pred             CCCCEEEEECCCCHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHhc----CCceEEECCCCCHHHHHHHHHHHHHhcC
Confidence            568999999999999999999999999999999999988887777663    2588999999999999999999999999


Q ss_pred             CccEEEEccccCCcccccccCChHHHHHHHHhhhHHHHHHHHHHhhhhhhcCCeEEEEcCccccccCCCCccchHHHHHH
Q 044010          125 RLDHLVNNAGISSVALFEDIVNITDFKQIMNINFWGSVYTTRFAVPHLRYTKGKIVVLSSAASWLTAPRMSFYNASKAAL  204 (248)
Q Consensus       125 ~id~vv~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~g~iV~isS~~~~~~~~~~~~Y~~sKaal  204 (248)
                      ++|++|||||.....++.+ .+.++|++.+++|+.|++.++++++|.|++++|+||++||..+..+.++...|++||+|+
T Consensus        77 ~id~lvnnAg~~~~~~~~~-~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~~~~iv~isS~~~~~~~~~~~~Y~asKaa~  155 (235)
T 3l6e_A           77 LPELVLHCAGTGEFGPVGV-YTAEQIRRVMESNLVSTILVAQQTVRLIGERGGVLANVLSSAAQVGKANESLYCASKWGM  155 (235)
T ss_dssp             SCSEEEEECCCC------C-CCHHHHHHHHHHHHHHHHHHHHHHHHHHTTTCEEEEEECCEECCSSCSSHHHHHHHHHHH
T ss_pred             CCcEEEECCCCCCCCChHh-CCHHHHHHHHHHHhHHHHHHHHHHHHHHHHcCCEEEEEeCHHhcCCCCCCcHHHHHHHHH
Confidence            9999999999876666555 578999999999999999999999999987778999999999999999999999999999


Q ss_pred             HHHHHHHHHHhCCC-eEEEEEecCccccCccccc
Q 044010          205 VLFFETLRVELGSD-VGVTIVTPGFIESELTQGK  237 (248)
Q Consensus       205 ~~l~~~la~~~~~~-i~v~~v~pg~v~T~~~~~~  237 (248)
                      ++|+++++.|+++. ||||+|+||+++|+|....
T Consensus       156 ~~~~~~la~e~~~~gi~v~~v~PG~v~T~~~~~~  189 (235)
T 3l6e_A          156 RGFLESLRAELKDSPLRLVNLYPSGIRSEFWDNT  189 (235)
T ss_dssp             HHHHHHHHHHTTTSSEEEEEEEEEEECCCC----
T ss_pred             HHHHHHHHHHhhccCCEEEEEeCCCccCcchhcc
Confidence            99999999999875 9999999999999997654

>3v2h_A D-beta-hydroxybutyrate dehydrogenase; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; 3.00A {Sinorhizobium meliloti}

Probab=100.00  E-value=2.3e-40  Score=281.86  Aligned_cols=197  Identities=28%  Similarity=0.448  Sum_probs=172.9

Q ss_pred             cccCCCCCEEEEcCCCChHHHHHHHHHHHcCCeEEEEeC-CcchHHHHHHHHHhhCCCcEEEEEccCCCHHHHHHHHHHH
Q 044010           41 FSEDVSGKVVIITGASSGIGEHLAYEYARRGACLALCAR-REKSLEEVADTAREIGSPDVITIRADVSKVDDCRSLVEET  119 (248)
Q Consensus        41 ~~~~~~~k~~lVtGg~~gIG~aia~~l~~~G~~V~l~~r-~~~~~~~~~~~l~~~~~~~v~~~~~D~~~~~~~~~~~~~~  119 (248)
                      +.+++++|++|||||++|||+++|++|+++|++|++++| +.+..++..+++++..+.++.++.+|++|.++++++++++
T Consensus        19 ~~~~l~~k~~lVTGas~GIG~~ia~~la~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~Dv~d~~~v~~~~~~~   98 (281)
T 3v2h_A           19 YFQSMMTKTAVITGSTSGIGLAIARTLAKAGANIVLNGFGAPDEIRTVTDEVAGLSSGTVLHHPADMTKPSEIADMMAMV   98 (281)
T ss_dssp             ---CCTTCEEEEETCSSHHHHHHHHHHHHTTCEEEEECCCCHHHHHHHHHHHHTTCSSCEEEECCCTTCHHHHHHHHHHH
T ss_pred             hhhccCCCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEeCCChHHHHHHHHHHhhccCCcEEEEeCCCCCHHHHHHHHHHH
Confidence            345899999999999999999999999999999999999 5667777777887765568999999999999999999999


Q ss_pred             HhHcCCccEEEEccccCCcccccccCChHHHHHHHHhhhHHHHHHHHHHhhhhhhc-CCeEEEEcCccccccCCCCccch
Q 044010          120 MNHFGRLDHLVNNAGISSVALFEDIVNITDFKQIMNINFWGSVYTTRFAVPHLRYT-KGKIVVLSSAASWLTAPRMSFYN  198 (248)
Q Consensus       120 ~~~~g~id~vv~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~-~g~iV~isS~~~~~~~~~~~~Y~  198 (248)
                      .+++|++|++|||||.....++.+ .+.++|++.+++|+.+++.++++++|.|.++ .|+||++||..+..+.++..+|+
T Consensus        99 ~~~~g~iD~lv~nAg~~~~~~~~~-~~~~~~~~~~~vN~~g~~~l~~~~~~~~~~~~~g~iv~isS~~~~~~~~~~~~Y~  177 (281)
T 3v2h_A           99 ADRFGGADILVNNAGVQFVEKIED-FPVEQWDRIIAVNLSSSFHTIRGAIPPMKKKGWGRIINIASAHGLVASPFKSAYV  177 (281)
T ss_dssp             HHHTSSCSEEEECCCCCCCCCGGG-CCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEEECCGGGTSCCTTCHHHH
T ss_pred             HHHCCCCCEEEECCCCCCCCCccc-CCHHHHHHHHHHHhHHHHHHHHHHHHHHHHcCCCEEEEECCcccccCCCCchHHH
Confidence            999999999999999887666655 5789999999999999999999999998754 48999999999999999999999


Q ss_pred             HHHHHHHHHHHHHHHHhCC-CeEEEEEecCccccCcccccc
Q 044010          199 ASKAALVLFFETLRVELGS-DVGVTIVTPGFIESELTQGKF  238 (248)
Q Consensus       199 ~sKaal~~l~~~la~~~~~-~i~v~~v~pg~v~T~~~~~~~  238 (248)
                      +||+|+++|+++++.|+++ +||||+|+||+++|++.+...
T Consensus       178 asKaa~~~l~~~la~e~~~~gI~vn~v~PG~v~t~~~~~~~  218 (281)
T 3v2h_A          178 AAKHGIMGLTKTVALEVAESGVTVNSICPGYVLTPLVEKQI  218 (281)
T ss_dssp             HHHHHHHHHHHHHHHHHGGGTEEEEEEEECSBCC-------
T ss_pred             HHHHHHHHHHHHHHHHhhhcCcEEEEEECCCCcCcchhhhc
Confidence            9999999999999999987 499999999999999977543

>3t7c_A Carveol dehydrogenase; structural genomics, seattle structural genomics center for infectious disease, ssgcid; HET: NAD; 1.95A {Mycobacterium avium}

Probab=100.00  E-value=4.4e-40  Score=282.51  Aligned_cols=195  Identities=29%  Similarity=0.440  Sum_probs=175.5

Q ss_pred             cccCCCCCEEEEcCCCChHHHHHHHHHHHcCCeEEEEeCC------------cchHHHHHHHHHhhCCCcEEEEEccCCC
Q 044010           41 FSEDVSGKVVIITGASSGIGEHLAYEYARRGACLALCARR------------EKSLEEVADTAREIGSPDVITIRADVSK  108 (248)
Q Consensus        41 ~~~~~~~k~~lVtGg~~gIG~aia~~l~~~G~~V~l~~r~------------~~~~~~~~~~l~~~~~~~v~~~~~D~~~  108 (248)
                      +..+++||++|||||++|||+++|++|+++|++|++++|+            .+++++..+++++.+. ++.++.+|++|
T Consensus        22 m~~~l~gk~~lVTGas~GIG~aia~~la~~G~~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~Dv~~  100 (299)
T 3t7c_A           22 MAGKVEGKVAFITGAARGQGRSHAITLAREGADIIAIDVCKQLDGVKLPMSTPDDLAETVRQVEALGR-RIIASQVDVRD  100 (299)
T ss_dssp             CCCTTTTCEEEEESTTSHHHHHHHHHHHHTTCEEEEEECCSCCTTCCSCCCCHHHHHHHHHHHHHTTC-CEEEEECCTTC
T ss_pred             cccccCCCEEEEECCCCHHHHHHHHHHHHCCCEEEEEecccccccccccccCHHHHHHHHHHHHhcCC-ceEEEECCCCC
Confidence            4457899999999999999999999999999999999987            5566667777766654 89999999999


Q ss_pred             HHHHHHHHHHHHhHcCCccEEEEccccCCcccccccCChHHHHHHHHhhhHHHHHHHHHHhhhhhhc--CCeEEEEcCcc
Q 044010          109 VDDCRSLVEETMNHFGRLDHLVNNAGISSVALFEDIVNITDFKQIMNINFWGSVYTTRFAVPHLRYT--KGKIVVLSSAA  186 (248)
Q Consensus       109 ~~~~~~~~~~~~~~~g~id~vv~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~--~g~iV~isS~~  186 (248)
                      .++++++++++.+++|++|++|||||.........+.+.++|++.+++|+.+++.+++.++|.|.++  +|+||++||.+
T Consensus       101 ~~~v~~~~~~~~~~~g~iD~lv~nAg~~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~~~~~~~~g~Iv~isS~~  180 (299)
T 3t7c_A          101 FDAMQAAVDDGVTQLGRLDIVLANAALASEGTRLNRMDPKTWRDMIDVNLNGAWITARVAIPHIMAGKRGGSIVFTSSIG  180 (299)
T ss_dssp             HHHHHHHHHHHHHHHSCCCEEEECCCCCCCCCCTTTCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHTTSCEEEEEECCGG
T ss_pred             HHHHHHHHHHHHHHhCCCCEEEECCCCCCCCCchhhCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcCCCcEEEEECChh
Confidence            9999999999999999999999999988766533346889999999999999999999999997654  48999999999


Q ss_pred             ccccCCCCccchHHHHHHHHHHHHHHHHhCC-CeEEEEEecCccccCcccc
Q 044010          187 SWLTAPRMSFYNASKAALVLFFETLRVELGS-DVGVTIVTPGFIESELTQG  236 (248)
Q Consensus       187 ~~~~~~~~~~Y~~sKaal~~l~~~la~~~~~-~i~v~~v~pg~v~T~~~~~  236 (248)
                      +..+.++..+|++||+|+++|+++++.|+++ +||||+|+||+|+|+|...
T Consensus       181 ~~~~~~~~~~Y~asKaa~~~l~~~la~e~~~~gI~vn~v~PG~v~T~~~~~  231 (299)
T 3t7c_A          181 GLRGAENIGNYIASKHGLHGLMRTMALELGPRNIRVNIVCPSSVATPMLLN  231 (299)
T ss_dssp             GTSCCTTCHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEESCBSSTTTSS
T ss_pred             hccCCCCcchHHHHHHHHHHHHHHHHHHhcccCcEEEEEecCCccCccccc
Confidence            9999999999999999999999999999987 4999999999999999764

>3rwb_A TPLDH, pyridoxal 4-dehydrogenase; short chain dehydrogenase/reductase, 4-pyridoxola NAD+, oxidoreductase; HET: NAD 4PL; 1.70A {Mesorhizobium loti} PDB: 3ndr_A* 3nug_A*

Probab=100.00  E-value=1.3e-40  Score=278.33  Aligned_cols=190  Identities=29%  Similarity=0.503  Sum_probs=174.4

Q ss_pred             cCCCCCEEEEcCCCChHHHHHHHHHHHcCCeEEEEeCCcchHHHHHHHHHhhCCCcEEEEEccCCCHHHHHHHHHHHHhH
Q 044010           43 EDVSGKVVIITGASSGIGEHLAYEYARRGACLALCARREKSLEEVADTAREIGSPDVITIRADVSKVDDCRSLVEETMNH  122 (248)
Q Consensus        43 ~~~~~k~~lVtGg~~gIG~aia~~l~~~G~~V~l~~r~~~~~~~~~~~l~~~~~~~v~~~~~D~~~~~~~~~~~~~~~~~  122 (248)
                      ++++||++|||||++|||+++|++|+++|++|++++|+.++.++..+++    +.++.++.+|++|.++++++++++.++
T Consensus         2 ~~l~gk~vlVTGas~gIG~a~a~~l~~~G~~V~~~~r~~~~~~~~~~~~----~~~~~~~~~Dv~~~~~v~~~~~~~~~~   77 (247)
T 3rwb_A            2 ERLAGKTALVTGAAQGIGKAIAARLAADGATVIVSDINAEGAKAAAASI----GKKARAIAADISDPGSVKALFAEIQAL   77 (247)
T ss_dssp             CTTTTCEEEEETTTSHHHHHHHHHHHHTTCEEEEECSCHHHHHHHHHHH----CTTEEECCCCTTCHHHHHHHHHHHHHH
T ss_pred             CCcCCCEEEEECCCCHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHh----CCceEEEEcCCCCHHHHHHHHHHHHHH
Confidence            5789999999999999999999999999999999999988777766655    347899999999999999999999999


Q ss_pred             cCCccEEEEccccCCcccccccCChHHHHHHHHhhhHHHHHHHHHHhhhhhhc--CCeEEEEcCccccccCCCCccchHH
Q 044010          123 FGRLDHLVNNAGISSVALFEDIVNITDFKQIMNINFWGSVYTTRFAVPHLRYT--KGKIVVLSSAASWLTAPRMSFYNAS  200 (248)
Q Consensus       123 ~g~id~vv~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~--~g~iV~isS~~~~~~~~~~~~Y~~s  200 (248)
                      +|++|++|||||.....++.+ .+.++|++.+++|+.+++++++++.|.|++.  .|+||++||..+..+.++..+|++|
T Consensus        78 ~g~id~lv~nAg~~~~~~~~~-~~~~~~~~~~~~N~~g~~~~~~~~~~~~~~~~~~g~iv~isS~~~~~~~~~~~~Y~as  156 (247)
T 3rwb_A           78 TGGIDILVNNASIVPFVAWDD-VDLDHWRKIIDVNLTGTFIVTRAGTDQMRAAGKAGRVISIASNTFFAGTPNMAAYVAA  156 (247)
T ss_dssp             HSCCSEEEECCCCCCCCCGGG-CCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCCEEEEEECCTHHHHTCTTCHHHHHH
T ss_pred             CCCCCEEEECCCCCCCCCccc-CCHHHHHHHHHHhhHHHHHHHHHHHHHHHHcCCCcEEEEECchhhccCCCCchhhHHH
Confidence            999999999999887666655 5789999999999999999999999999754  4899999999999999999999999


Q ss_pred             HHHHHHHHHHHHHHhCC-CeEEEEEecCccccCccccc
Q 044010          201 KAALVLFFETLRVELGS-DVGVTIVTPGFIESELTQGK  237 (248)
Q Consensus       201 Kaal~~l~~~la~~~~~-~i~v~~v~pg~v~T~~~~~~  237 (248)
                      |+|+++|+++++.|+++ +||||+|+||+++|++.+..
T Consensus       157 Kaa~~~~~~~la~e~~~~gi~vn~v~PG~v~t~~~~~~  194 (247)
T 3rwb_A          157 KGGVIGFTRALATELGKYNITANAVTPGLIESDGVKAS  194 (247)
T ss_dssp             HHHHHHHHHHHHHHHGGGTEEEEEEEECSBCCHHHHTS
T ss_pred             HHHHHHHHHHHHHHhhhcCeEEEEEeeCcCcCcccccc
Confidence            99999999999999987 49999999999999987654

>3s55_A Putative short-chain dehydrogenase/reductase; structural genomics, seattle structural genomics center for infectious disease, ssgcid; HET: NAD; 2.10A {Mycobacterium abscessus} SCOP: c.2.1.0

Probab=100.00  E-value=4.4e-40  Score=279.84  Aligned_cols=192  Identities=28%  Similarity=0.431  Sum_probs=173.6

Q ss_pred             cCCCCCEEEEcCCCChHHHHHHHHHHHcCCeEEEEeCC------------cchHHHHHHHHHhhCCCcEEEEEccCCCHH
Q 044010           43 EDVSGKVVIITGASSGIGEHLAYEYARRGACLALCARR------------EKSLEEVADTAREIGSPDVITIRADVSKVD  110 (248)
Q Consensus        43 ~~~~~k~~lVtGg~~gIG~aia~~l~~~G~~V~l~~r~------------~~~~~~~~~~l~~~~~~~v~~~~~D~~~~~  110 (248)
                      .+++||++|||||++|||+++|++|+++|++|++++|+            .+.+++..+++++.+ .++.++.+|++|.+
T Consensus         6 ~~l~~k~~lVTGas~gIG~a~a~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~Dv~~~~   84 (281)
T 3s55_A            6 ADFEGKTALITGGARGMGRSHAVALAEAGADIAICDRCENSDVVGYPLATADDLAETVALVEKTG-RRCISAKVDVKDRA   84 (281)
T ss_dssp             CTTTTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEECCSCCTTCSSCCCCHHHHHHHHHHHHHTT-CCEEEEECCTTCHH
T ss_pred             cccCCCEEEEeCCCchHHHHHHHHHHHCCCeEEEEeCCccccccccccccHHHHHHHHHHHHhcC-CeEEEEeCCCCCHH
Confidence            47899999999999999999999999999999999997            344555556665555 47899999999999


Q ss_pred             HHHHHHHHHHhHcCCccEEEEccccCCcccccccCChHHHHHHHHhhhHHHHHHHHHHhhhhhhc-CCeEEEEcCccccc
Q 044010          111 DCRSLVEETMNHFGRLDHLVNNAGISSVALFEDIVNITDFKQIMNINFWGSVYTTRFAVPHLRYT-KGKIVVLSSAASWL  189 (248)
Q Consensus       111 ~~~~~~~~~~~~~g~id~vv~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~-~g~iV~isS~~~~~  189 (248)
                      +++++++++.+++|++|++|||||.....++.+ .+.++|++.+++|+.+++++++++.|.|.++ .|+||++||..+..
T Consensus        85 ~v~~~~~~~~~~~g~id~lv~nAg~~~~~~~~~-~~~~~~~~~~~~N~~g~~~~~~~~~~~~~~~~~g~iv~isS~~~~~  163 (281)
T 3s55_A           85 ALESFVAEAEDTLGGIDIAITNAGISTIALLPE-VESAQWDEVIGTNLTGTFNTIAAVAPGMIKRNYGRIVTVSSMLGHS  163 (281)
T ss_dssp             HHHHHHHHHHHHHTCCCEEEECCCCCCCCCTTC-CCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEEECCGGGGS
T ss_pred             HHHHHHHHHHHhcCCCCEEEECCCCCCCCCccc-CCHHHHHHHHHHHhHHHHHHHHHHHHHHHHcCCCEEEEECChhhcC
Confidence            999999999999999999999999887666555 5789999999999999999999999998754 58999999999999


Q ss_pred             cCCCCccchHHHHHHHHHHHHHHHHhCC-CeEEEEEecCccccCcccc
Q 044010          190 TAPRMSFYNASKAALVLFFETLRVELGS-DVGVTIVTPGFIESELTQG  236 (248)
Q Consensus       190 ~~~~~~~Y~~sKaal~~l~~~la~~~~~-~i~v~~v~pg~v~T~~~~~  236 (248)
                      +.++..+|++||+|+++|+++++.|+++ +||||+|+||+|+|+|.+.
T Consensus       164 ~~~~~~~Y~asK~a~~~~~~~la~e~~~~gi~vn~v~PG~v~t~~~~~  211 (281)
T 3s55_A          164 ANFAQASYVSSKWGVIGLTKCAAHDLVGYGITVNAVAPGNIETPMTHN  211 (281)
T ss_dssp             CCTTCHHHHHHHHHHHHHHHHHHHHTGGGTEEEEEEEECSBCSTTTSS
T ss_pred             CCCCCchhHHHHHHHHHHHHHHHHHHhhcCcEEEEEecCcccCccccc
Confidence            9999999999999999999999999987 5999999999999999864

>3nyw_A Putative oxidoreductase; fatty acid synthesis,3-oxoacyl-[ACP] reductase, NADP+ bindin rossman fold, PSI-II, nysgxrc; 2.16A {Bacteroides thetaiotaomicron}

Probab=100.00  E-value=1.4e-40  Score=278.57  Aligned_cols=195  Identities=25%  Similarity=0.361  Sum_probs=169.3

Q ss_pred             ccCCCCCEEEEcCCCChHHHHHHHHHHHcCCeEEEEeCCcchHHHHHHHHHhhC--CCcEEEEEccCCCHHHHHHHHHHH
Q 044010           42 SEDVSGKVVIITGASSGIGEHLAYEYARRGACLALCARREKSLEEVADTAREIG--SPDVITIRADVSKVDDCRSLVEET  119 (248)
Q Consensus        42 ~~~~~~k~~lVtGg~~gIG~aia~~l~~~G~~V~l~~r~~~~~~~~~~~l~~~~--~~~v~~~~~D~~~~~~~~~~~~~~  119 (248)
                      ..++++|++|||||++|||+++|++|+++|++|++++|+.+++++..+++.+..  ..++.++.+|++|.++++++++++
T Consensus         2 ~~~~~~k~~lVTGas~GIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~   81 (250)
T 3nyw_A            2 SLEKQKGLAIITGASQGIGAVIAAGLATDGYRVVLIARSKQNLEKVHDEIMRSNKHVQEPIVLPLDITDCTKADTEIKDI   81 (250)
T ss_dssp             ---CCCCEEEEESTTSHHHHHHHHHHHHHTCEEEEEESCHHHHHHHHHHHHHHCTTSCCCEEEECCTTCHHHHHHHHHHH
T ss_pred             cccCCCCEEEEECCCcHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHHhccccCcceEEeccCCCHHHHHHHHHHH
Confidence            357889999999999999999999999999999999999999999888887763  247889999999999999999999


Q ss_pred             HhHcCCccEEEEccccCCcccccccCChHHHHHHHHhhhHHHHHHHHHHhhhhhhc-CCeEEEEcCccccccCCCCccch
Q 044010          120 MNHFGRLDHLVNNAGISSVALFEDIVNITDFKQIMNINFWGSVYTTRFAVPHLRYT-KGKIVVLSSAASWLTAPRMSFYN  198 (248)
Q Consensus       120 ~~~~g~id~vv~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~-~g~iV~isS~~~~~~~~~~~~Y~  198 (248)
                      .+++|++|++|||||.....++ + .+.++|++.+++|+.+++.+++++.|.|+++ .|+||++||..+..+.++...|+
T Consensus        82 ~~~~g~iD~lvnnAg~~~~~~~-~-~~~~~~~~~~~vN~~g~~~l~~~~~~~~~~~~~g~iv~isS~~~~~~~~~~~~Y~  159 (250)
T 3nyw_A           82 HQKYGAVDILVNAAAMFMDGSL-S-EPVDNFRKIMEINVIAQYGILKTVTEIMKVQKNGYIFNVASRAAKYGFADGGIYG  159 (250)
T ss_dssp             HHHHCCEEEEEECCCCCCCCCC-S-CHHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEEECC-------CCTTHHH
T ss_pred             HHhcCCCCEEEECCCcCCCCCC-C-CCHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCCeEEEEEccHHhcCCCCCCcchH
Confidence            9999999999999998776655 3 4679999999999999999999999998754 48999999999998777789999


Q ss_pred             HHHHHHHHHHHHHHHHhCC-CeEEEEEecCccccCcccccc
Q 044010          199 ASKAALVLFFETLRVELGS-DVGVTIVTPGFIESELTQGKF  238 (248)
Q Consensus       199 ~sKaal~~l~~~la~~~~~-~i~v~~v~pg~v~T~~~~~~~  238 (248)
                      +||+|+++|+++++.|+++ +||||+|+||+++|+|.+...
T Consensus       160 asKaa~~~l~~~la~e~~~~gi~vn~v~PG~v~T~~~~~~~  200 (250)
T 3nyw_A          160 STKFALLGLAESLYRELAPLGIRVTTLCPGWVNTDMAKKAG  200 (250)
T ss_dssp             HHHHHHHHHHHHHHHHHGGGTEEEEEEEESSBCSHHHHHTT
T ss_pred             HHHHHHHHHHHHHHHHhhhcCcEEEEEecCcccCchhhhcC
Confidence            9999999999999999987 499999999999999987543

>3pgx_A Carveol dehydrogenase; structural genomics, seattle structural genomics center for infectious disease, ssgcid; HET: NAD; 1.85A {Mycobacterium avium} SCOP: c.2.1.0

Probab=100.00  E-value=4.1e-40  Score=279.99  Aligned_cols=193  Identities=32%  Similarity=0.463  Sum_probs=175.5

Q ss_pred             ccCCCCCEEEEcCCCChHHHHHHHHHHHcCCeEEEEeC-------------CcchHHHHHHHHHhhCCCcEEEEEccCCC
Q 044010           42 SEDVSGKVVIITGASSGIGEHLAYEYARRGACLALCAR-------------REKSLEEVADTAREIGSPDVITIRADVSK  108 (248)
Q Consensus        42 ~~~~~~k~~lVtGg~~gIG~aia~~l~~~G~~V~l~~r-------------~~~~~~~~~~~l~~~~~~~v~~~~~D~~~  108 (248)
                      +.+++||++|||||++|||+++|++|+++|++|++++|             +.+++++..+++++.+. ++.++.+|++|
T Consensus        10 ~~~l~gk~~lVTGas~gIG~a~a~~la~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~Dv~~   88 (280)
T 3pgx_A           10 AGSLQGRVAFITGAARGQGRSHAVRLAAEGADIIACDICAPVSASVTYAPASPEDLDETARLVEDQGR-KALTRVLDVRD   88 (280)
T ss_dssp             -CTTTTCEEEEESTTSHHHHHHHHHHHHTTCEEEEEECCSCCCTTCCSCCCCHHHHHHHHHHHHTTTC-CEEEEECCTTC
T ss_pred             ccccCCCEEEEECCCcHHHHHHHHHHHHCCCEEEEEeccccccccccccccCHHHHHHHHHHHHhcCC-eEEEEEcCCCC
Confidence            34789999999999999999999999999999999998             55666777777766554 78999999999


Q ss_pred             HHHHHHHHHHHHhHcCCccEEEEccccCCcccccccCChHHHHHHHHhhhHHHHHHHHHHhhhhhhc--CCeEEEEcCcc
Q 044010          109 VDDCRSLVEETMNHFGRLDHLVNNAGISSVALFEDIVNITDFKQIMNINFWGSVYTTRFAVPHLRYT--KGKIVVLSSAA  186 (248)
Q Consensus       109 ~~~~~~~~~~~~~~~g~id~vv~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~--~g~iV~isS~~  186 (248)
                      .++++++++++.+++|++|++|||||.....++.+ .+.++|++.+++|+.++++++++++|.|.++  +|+||++||..
T Consensus        89 ~~~v~~~~~~~~~~~g~id~lvnnAg~~~~~~~~~-~~~~~~~~~~~~N~~g~~~~~~~~~~~~~~~~~~g~iv~isS~~  167 (280)
T 3pgx_A           89 DAALRELVADGMEQFGRLDVVVANAGVLSWGRVWE-LTDEQWDTVIGVNLTGTWRTLRATVPAMIEAGNGGSIVVVSSSA  167 (280)
T ss_dssp             HHHHHHHHHHHHHHHCCCCEEEECCCCCCCBCGGG-CCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHCSCEEEEEECCGG
T ss_pred             HHHHHHHHHHHHHHcCCCCEEEECCCCCCCCCccc-CCHHHHHHHHhhhhHHHHHHHHHHHHHHHhcCCCCEEEEEcchh
Confidence            99999999999999999999999999987766655 5789999999999999999999999998754  58999999999


Q ss_pred             ccccCCCCccchHHHHHHHHHHHHHHHHhCC-CeEEEEEecCccccCcccc
Q 044010          187 SWLTAPRMSFYNASKAALVLFFETLRVELGS-DVGVTIVTPGFIESELTQG  236 (248)
Q Consensus       187 ~~~~~~~~~~Y~~sKaal~~l~~~la~~~~~-~i~v~~v~pg~v~T~~~~~  236 (248)
                      +..+.++..+|++||+|+++|+++++.|+++ +||||+|+||+|+|++.+.
T Consensus       168 ~~~~~~~~~~Y~asKaa~~~~~~~la~e~~~~gi~vn~v~PG~v~t~~~~~  218 (280)
T 3pgx_A          168 GLKATPGNGHYSASKHGLTALTNTLAIELGEYGIRVNSIHPYSVETPMIEP  218 (280)
T ss_dssp             GTSCCTTBHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECSBCSTTCCH
T ss_pred             hccCCCCchhHHHHHHHHHHHHHHHHHHhhhcCeEEEEEeeCcccCcccch
Confidence            9999999999999999999999999999987 4999999999999999764

>3svt_A Short-chain type dehydrogenase/reductase; ssgcid, seattle structural genomics center for infectious DI oxidoreductase; 2.00A {Mycobacterium ulcerans}

Probab=100.00  E-value=2.6e-40  Score=281.37  Aligned_cols=196  Identities=23%  Similarity=0.372  Sum_probs=176.4

Q ss_pred             cccCCCCCEEEEcCCCChHHHHHHHHHHHcCCeEEEEeCCcchHHHHHHHHHhhCC--CcEEEEEccCCCHHHHHHHHHH
Q 044010           41 FSEDVSGKVVIITGASSGIGEHLAYEYARRGACLALCARREKSLEEVADTAREIGS--PDVITIRADVSKVDDCRSLVEE  118 (248)
Q Consensus        41 ~~~~~~~k~~lVtGg~~gIG~aia~~l~~~G~~V~l~~r~~~~~~~~~~~l~~~~~--~~v~~~~~D~~~~~~~~~~~~~  118 (248)
                      +.+++++|++|||||++|||+++|++|+++|++|++++|+.++.++..+++++.+.  .++.++.+|++|.+++++++++
T Consensus         5 m~~~l~~k~vlVTGas~gIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~   84 (281)
T 3svt_A            5 MQLSFQDRTYLVTGGGSGIGKGVAAGLVAAGASVMIVGRNPDKLAGAVQELEALGANGGAIRYEPTDITNEDETARAVDA   84 (281)
T ss_dssp             ---CCTTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHTTCCSSCEEEEEECCTTSHHHHHHHHHH
T ss_pred             CccCcCCCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHHhCCCCceEEEEeCCCCCHHHHHHHHHH
Confidence            45688999999999999999999999999999999999999999988888887653  2788999999999999999999


Q ss_pred             HHhHcCCccEEEEccccCC-cccccccCChHHHHHHHHhhhHHHHHHHHHHhhhhhhc-CCeEEEEcCccccccCCCCcc
Q 044010          119 TMNHFGRLDHLVNNAGISS-VALFEDIVNITDFKQIMNINFWGSVYTTRFAVPHLRYT-KGKIVVLSSAASWLTAPRMSF  196 (248)
Q Consensus       119 ~~~~~g~id~vv~~ag~~~-~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~-~g~iV~isS~~~~~~~~~~~~  196 (248)
                      +.+++|++|++|||||... ..+..+ .+.++|++.+++|+.+++++++++.|.|.++ +|+||++||..+..+.++..+
T Consensus        85 ~~~~~g~id~lv~nAg~~~~~~~~~~-~~~~~~~~~~~vN~~g~~~~~~~~~~~~~~~~~g~iv~isS~~~~~~~~~~~~  163 (281)
T 3svt_A           85 VTAWHGRLHGVVHCAGGSENIGPITQ-VDSEAWRRTVDLNVNGTMYVLKHAAREMVRGGGGSFVGISSIAASNTHRWFGA  163 (281)
T ss_dssp             HHHHHSCCCEEEECCCCCCCCCCGGG-CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHTTCEEEEEECCHHHHSCCTTCTH
T ss_pred             HHHHcCCCCEEEECCCcCCCCCCccc-CCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcCCcEEEEEeCHHHcCCCCCChh
Confidence            9999999999999999743 344444 5789999999999999999999999998754 489999999999999999999


Q ss_pred             chHHHHHHHHHHHHHHHHhCCC-eEEEEEecCccccCccccc
Q 044010          197 YNASKAALVLFFETLRVELGSD-VGVTIVTPGFIESELTQGK  237 (248)
Q Consensus       197 Y~~sKaal~~l~~~la~~~~~~-i~v~~v~pg~v~T~~~~~~  237 (248)
                      |++||+++++|+++++.|+++. ||||+|+||+++|+|.+..
T Consensus       164 Y~asK~a~~~l~~~la~e~~~~gi~vn~v~PG~v~t~~~~~~  205 (281)
T 3svt_A          164 YGVTKSAVDHLMQLAADELGASWVRVNSIRPGLIRTDLVAAI  205 (281)
T ss_dssp             HHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECSBCSGGGHHH
T ss_pred             HHHHHHHHHHHHHHHHHHhhhcCeEEEEEEeCcCcCcchhhc
Confidence            9999999999999999999874 9999999999999998754

>3oid_A Enoyl-[acyl-carrier-protein] reductase [NADPH]; fatty acid synthesis, enoyl-ACP reductases, FABL, rossmann-L NADPH binding, oxidoreductase; HET: TCL NDP; 1.80A {Bacillus subtilis} PDB: 3oic_A*

Probab=100.00  E-value=4.1e-40  Score=277.03  Aligned_cols=191  Identities=27%  Similarity=0.361  Sum_probs=175.6

Q ss_pred             CCCEEEEcCCCChHHHHHHHHHHHcCCeEEEE-eCCcchHHHHHHHHHhhCCCcEEEEEccCCCHHHHHHHHHHHHhHcC
Q 044010           46 SGKVVIITGASSGIGEHLAYEYARRGACLALC-ARREKSLEEVADTAREIGSPDVITIRADVSKVDDCRSLVEETMNHFG  124 (248)
Q Consensus        46 ~~k~~lVtGg~~gIG~aia~~l~~~G~~V~l~-~r~~~~~~~~~~~l~~~~~~~v~~~~~D~~~~~~~~~~~~~~~~~~g  124 (248)
                      ++|++|||||++|||+++|++|+++|++|++. +|+.++.++..+++++.+. ++.++.+|++|.++++++++++.+++|
T Consensus         3 ~~k~vlVTGas~gIG~aia~~l~~~G~~vv~~~~r~~~~~~~~~~~~~~~~~-~~~~~~~Dv~~~~~v~~~~~~~~~~~g   81 (258)
T 3oid_A            3 QNKCALVTGSSRGVGKAAAIRLAENGYNIVINYARSKKAALETAEEIEKLGV-KVLVVKANVGQPAKIKEMFQQIDETFG   81 (258)
T ss_dssp             CCCEEEESSCSSHHHHHHHHHHHHTTCEEEEEESSCHHHHHHHHHHHHTTTC-CEEEEECCTTCHHHHHHHHHHHHHHHS
T ss_pred             CCCEEEEecCCchHHHHHHHHHHHCCCEEEEEcCCCHHHHHHHHHHHHhcCC-cEEEEEcCCCCHHHHHHHHHHHHHHcC
Confidence            68999999999999999999999999999987 8888888888888876654 799999999999999999999999999


Q ss_pred             CccEEEEccccCCcccccccCChHHHHHHHHhhhHHHHHHHHHHhhhhhhcC-CeEEEEcCccccccCCCCccchHHHHH
Q 044010          125 RLDHLVNNAGISSVALFEDIVNITDFKQIMNINFWGSVYTTRFAVPHLRYTK-GKIVVLSSAASWLTAPRMSFYNASKAA  203 (248)
Q Consensus       125 ~id~vv~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~-g~iV~isS~~~~~~~~~~~~Y~~sKaa  203 (248)
                      ++|++|||||.....++.+ .+.++|++.+++|+.++++++++++|.|++++ |+||++||..+..+.++..+|++||+|
T Consensus        82 ~id~lv~nAg~~~~~~~~~-~~~~~~~~~~~vN~~g~~~~~~~~~~~m~~~~~g~iv~isS~~~~~~~~~~~~Y~asKaa  160 (258)
T 3oid_A           82 RLDVFVNNAASGVLRPVME-LEETHWDWTMNINAKALLFCAQEAAKLMEKNGGGHIVSISSLGSIRYLENYTTVGVSKAA  160 (258)
T ss_dssp             CCCEEEECCCCCCCSCGGG-CCHHHHHHHHHHHTHHHHHHHHHHHHHHHTTTCEEEEEEEEGGGTSBCTTCHHHHHHHHH
T ss_pred             CCCEEEECCCCCCCCChhh-CCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcCCcEEEEECchhhCCCCCCcHHHHHHHHH
Confidence            9999999999877666655 57899999999999999999999999997654 899999999999999999999999999


Q ss_pred             HHHHHHHHHHHhCCC-eEEEEEecCccccCcccccc
Q 044010          204 LVLFFETLRVELGSD-VGVTIVTPGFIESELTQGKF  238 (248)
Q Consensus       204 l~~l~~~la~~~~~~-i~v~~v~pg~v~T~~~~~~~  238 (248)
                      +++|+++++.|+++. ||||+|+||+++|+|.+...
T Consensus       161 ~~~l~~~la~e~~~~gi~vn~v~PG~v~T~~~~~~~  196 (258)
T 3oid_A          161 LEALTRYLAVELSPKQIIVNAVSGGAIDTDALKHFP  196 (258)
T ss_dssp             HHHHHHHHHHHTGGGTEEEEEEEECCBCSGGGGGCT
T ss_pred             HHHHHHHHHHHHhhcCcEEEEEeeCCCcChhhhhcc
Confidence            999999999999874 99999999999999987654

>4dmm_A 3-oxoacyl-[acyl-carrier-protein] reductase; rossmann fold, oxoacyl-ACP reductase, NADP binding, fatty AC biosynthsis, oxidoreductase; HET: NAP; 2.38A {Synechococcus elongatus} PDB: 4dml_A*

Probab=100.00  E-value=3.5e-40  Score=279.15  Aligned_cols=195  Identities=29%  Similarity=0.486  Sum_probs=176.5

Q ss_pred             ccCCCCCEEEEcCCCChHHHHHHHHHHHcCCeEEEEeC-CcchHHHHHHHHHhhCCCcEEEEEccCCCHHHHHHHHHHHH
Q 044010           42 SEDVSGKVVIITGASSGIGEHLAYEYARRGACLALCAR-REKSLEEVADTAREIGSPDVITIRADVSKVDDCRSLVEETM  120 (248)
Q Consensus        42 ~~~~~~k~~lVtGg~~gIG~aia~~l~~~G~~V~l~~r-~~~~~~~~~~~l~~~~~~~v~~~~~D~~~~~~~~~~~~~~~  120 (248)
                      .+++++|++|||||++|||+++|++|+++|++|++.+| +.+..++..+++++.+. ++.++.+|++|.++++++++++.
T Consensus        23 ~~~l~~k~vlVTGas~gIG~aia~~la~~G~~V~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~D~~d~~~v~~~~~~~~  101 (269)
T 4dmm_A           23 ALPLTDRIALVTGASRGIGRAIALELAAAGAKVAVNYASSAGAADEVVAAIAAAGG-EAFAVKADVSQESEVEALFAAVI  101 (269)
T ss_dssp             -CTTTTCEEEETTCSSHHHHHHHHHHHHTTCEEEEEESSCHHHHHHHHHHHHHTTC-CEEEEECCTTSHHHHHHHHHHHH
T ss_pred             ccCCCCCEEEEECCCCHHHHHHHHHHHHCCCEEEEEeCCChHHHHHHHHHHHhcCC-cEEEEECCCCCHHHHHHHHHHHH
Confidence            35789999999999999999999999999999999988 56667777777776654 78999999999999999999999


Q ss_pred             hHcCCccEEEEccccCCcccccccCChHHHHHHHHhhhHHHHHHHHHHhhhhhh-cCCeEEEEcCccccccCCCCccchH
Q 044010          121 NHFGRLDHLVNNAGISSVALFEDIVNITDFKQIMNINFWGSVYTTRFAVPHLRY-TKGKIVVLSSAASWLTAPRMSFYNA  199 (248)
Q Consensus       121 ~~~g~id~vv~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~-~~g~iV~isS~~~~~~~~~~~~Y~~  199 (248)
                      +++|++|++|||||.....++.+ .+.++|++.+++|+.+++++++.+.|.|.+ ..|+||++||.++..+.++..+|++
T Consensus       102 ~~~g~id~lv~nAg~~~~~~~~~-~~~~~~~~~~~vN~~g~~~l~~~~~~~~~~~~~g~iv~isS~~~~~~~~~~~~Y~a  180 (269)
T 4dmm_A          102 ERWGRLDVLVNNAGITRDTLLLR-MKRDDWQSVLDLNLGGVFLCSRAAAKIMLKQRSGRIINIASVVGEMGNPGQANYSA  180 (269)
T ss_dssp             HHHSCCCEEEECCCCCCCCCGGG-CCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCCEEEEECCHHHHHCCTTCHHHHH
T ss_pred             HHcCCCCEEEECCCCCCCCCccc-CCHHHHHHHHHHHhHHHHHHHHHHHHHHHHcCCcEEEEECchhhcCCCCCchhHHH
Confidence            99999999999999887666555 578999999999999999999999999875 4589999999999999999999999


Q ss_pred             HHHHHHHHHHHHHHHhCC-CeEEEEEecCccccCcccccc
Q 044010          200 SKAALVLFFETLRVELGS-DVGVTIVTPGFIESELTQGKF  238 (248)
Q Consensus       200 sKaal~~l~~~la~~~~~-~i~v~~v~pg~v~T~~~~~~~  238 (248)
                      ||+|+++|+++++.|+++ +||||+|+||+|+|+|.....
T Consensus       181 sK~a~~~l~~~la~e~~~~gi~vn~v~PG~v~T~~~~~~~  220 (269)
T 4dmm_A          181 AKAGVIGLTKTVAKELASRGITVNAVAPGFIATDMTSELA  220 (269)
T ss_dssp             HHHHHHHHHHHHHHHHGGGTCEEEEEEECCBTTSCSCHHH
T ss_pred             HHHHHHHHHHHHHHHHhhhCcEEEEEEECCCcCccccccc
Confidence            999999999999999987 499999999999999987643

>3ftp_A 3-oxoacyl-[acyl-carrier protein] reductase; ssgcid, 3-ketoacyl-(acyl-carrier- protein) reductase, oxidoreductase, structural genomics; 2.05A {Burkholderia pseudomallei}

Probab=100.00  E-value=1.7e-40  Score=281.28  Aligned_cols=195  Identities=30%  Similarity=0.450  Sum_probs=178.4

Q ss_pred             cccCCCCCEEEEcCCCChHHHHHHHHHHHcCCeEEEEeCCcchHHHHHHHHHhhCCCcEEEEEccCCCHHHHHHHHHHHH
Q 044010           41 FSEDVSGKVVIITGASSGIGEHLAYEYARRGACLALCARREKSLEEVADTAREIGSPDVITIRADVSKVDDCRSLVEETM  120 (248)
Q Consensus        41 ~~~~~~~k~~lVtGg~~gIG~aia~~l~~~G~~V~l~~r~~~~~~~~~~~l~~~~~~~v~~~~~D~~~~~~~~~~~~~~~  120 (248)
                      +..++++|++|||||++|||+++|++|+++|++|++++|+.++.++..+++++.+. ++.++.+|++|.++++++++++.
T Consensus        22 m~~~l~~k~~lVTGas~GIG~aia~~la~~G~~V~~~~r~~~~~~~~~~~~~~~~~-~~~~~~~Dv~d~~~v~~~~~~~~  100 (270)
T 3ftp_A           22 MDKTLDKQVAIVTGASRGIGRAIALELARRGAMVIGTATTEAGAEGIGAAFKQAGL-EGRGAVLNVNDATAVDALVESTL  100 (270)
T ss_dssp             -CCTTTTCEEEETTCSSHHHHHHHHHHHHTTCEEEEEESSHHHHHHHHHHHHHHTC-CCEEEECCTTCHHHHHHHHHHHH
T ss_pred             cccCCCCCEEEEECCCCHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcCC-cEEEEEEeCCCHHHHHHHHHHHH
Confidence            34578999999999999999999999999999999999999988888888877664 78899999999999999999999


Q ss_pred             hHcCCccEEEEccccCCcccccccCChHHHHHHHHhhhHHHHHHHHHHhhhhhh-cCCeEEEEcCccccccCCCCccchH
Q 044010          121 NHFGRLDHLVNNAGISSVALFEDIVNITDFKQIMNINFWGSVYTTRFAVPHLRY-TKGKIVVLSSAASWLTAPRMSFYNA  199 (248)
Q Consensus       121 ~~~g~id~vv~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~-~~g~iV~isS~~~~~~~~~~~~Y~~  199 (248)
                      +++|++|++|||||.....+..+ .+.++|++.+++|+.++++++++++|.|.+ .+|+||++||..+..+.++...|++
T Consensus       101 ~~~g~iD~lvnnAg~~~~~~~~~-~~~~~~~~~~~vN~~g~~~l~~~~~~~~~~~~~g~iv~isS~~~~~~~~~~~~Y~a  179 (270)
T 3ftp_A          101 KEFGALNVLVNNAGITQDQLAMR-MKDDEWDAVIDTNLKAVFRLSRAVLRPMMKARGGRIVNITSVVGSAGNPGQVNYAA  179 (270)
T ss_dssp             HHHSCCCEEEECCCCCCCBCTTT-CCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEEECCHHHHHCCTTBHHHHH
T ss_pred             HHcCCCCEEEECCCCCCCCCccc-CCHHHHHHHHHHhhHHHHHHHHHHHHHHHHcCCCEEEEECchhhCCCCCCchhHHH
Confidence            99999999999999887666555 578999999999999999999999999864 4589999999999999999999999


Q ss_pred             HHHHHHHHHHHHHHHhCC-CeEEEEEecCccccCccccc
Q 044010          200 SKAALVLFFETLRVELGS-DVGVTIVTPGFIESELTQGK  237 (248)
Q Consensus       200 sKaal~~l~~~la~~~~~-~i~v~~v~pg~v~T~~~~~~  237 (248)
                      ||+|+++|+++++.|+++ +||||+|+||+|+|+|.+..
T Consensus       180 sKaa~~~l~~~la~e~~~~gI~vn~v~PG~v~T~~~~~~  218 (270)
T 3ftp_A          180 AKAGVAGMTRALAREIGSRGITVNCVAPGFIDTDMTKGL  218 (270)
T ss_dssp             HHHHHHHHHHHHHHHHGGGTEEEEEEEECSBCSHHHHHS
T ss_pred             HHHHHHHHHHHHHHHHhhhCeEEEEEEeCCCcCcchhhc
Confidence            999999999999999987 49999999999999987654

>3rih_A Short chain dehydrogenase or reductase; structural genomics, seattle structural genomics center for infectious disease, ssgcid; HET: PG5; 2.15A {Mycobacterium abscessus}

Probab=100.00  E-value=3.3e-40  Score=282.61  Aligned_cols=195  Identities=32%  Similarity=0.497  Sum_probs=179.3

Q ss_pred             ccCCCCCEEEEcCCCChHHHHHHHHHHHcCCeEEEEeCCcchHHHHHHHHHhhCCCcEEEEEccCCCHHHHHHHHHHHHh
Q 044010           42 SEDVSGKVVIITGASSGIGEHLAYEYARRGACLALCARREKSLEEVADTAREIGSPDVITIRADVSKVDDCRSLVEETMN  121 (248)
Q Consensus        42 ~~~~~~k~~lVtGg~~gIG~aia~~l~~~G~~V~l~~r~~~~~~~~~~~l~~~~~~~v~~~~~D~~~~~~~~~~~~~~~~  121 (248)
                      ..+++||++|||||++|||+++|++|+++|++|++++|+.++.++..+++++.+..++.++.+|++|.++++++++++.+
T Consensus        36 m~~l~~k~vlVTGas~GIG~aia~~la~~G~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~Dv~d~~~v~~~~~~~~~  115 (293)
T 3rih_A           36 MFDLSARSVLVTGGTKGIGRGIATVFARAGANVAVAARSPRELSSVTAELGELGAGNVIGVRLDVSDPGSCADAARTVVD  115 (293)
T ss_dssp             TTCCTTCEEEETTTTSHHHHHHHHHHHHTTCEEEEEESSGGGGHHHHHHHTTSSSSCEEEEECCTTCHHHHHHHHHHHHH
T ss_pred             ccCCCCCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHhhCCCcEEEEEEeCCCHHHHHHHHHHHHH
Confidence            45789999999999999999999999999999999999999999999988877655899999999999999999999999


Q ss_pred             HcCCccEEEEccccCCcccccccCChHHHHHHHHhhhHHHHHHHHHHhhhhhhc-CCeEEEEcCcccc-ccCCCCccchH
Q 044010          122 HFGRLDHLVNNAGISSVALFEDIVNITDFKQIMNINFWGSVYTTRFAVPHLRYT-KGKIVVLSSAASW-LTAPRMSFYNA  199 (248)
Q Consensus       122 ~~g~id~vv~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~-~g~iV~isS~~~~-~~~~~~~~Y~~  199 (248)
                      ++|++|++|||||.....++.+ .+.++|++.+++|+.++++++++++|.|+++ .|+||++||..+. .+.++..+|++
T Consensus       116 ~~g~iD~lvnnAg~~~~~~~~~-~~~~~~~~~~~vN~~g~~~l~~~~~~~m~~~~~g~iV~isS~~~~~~~~~~~~~Y~a  194 (293)
T 3rih_A          116 AFGALDVVCANAGIFPEARLDT-MTPEQLSEVLDVNVKGTVYTVQACLAPLTASGRGRVILTSSITGPVTGYPGWSHYGA  194 (293)
T ss_dssp             HHSCCCEEEECCCCCCCCCTTT-CCHHHHHHHHHHHTHHHHHHHHHTHHHHHHHSSCEEEEECCSBTTTBBCTTCHHHHH
T ss_pred             HcCCCCEEEECCCCCCCCCccc-CCHHHHHHHHHHHhHHHHHHHHHHHHHHHHcCCCEEEEEeChhhccCCCCCCHHHHH
Confidence            9999999999999887666555 5789999999999999999999999998754 5999999999986 78889999999


Q ss_pred             HHHHHHHHHHHHHHHhCC-CeEEEEEecCccccCccccc
Q 044010          200 SKAALVLFFETLRVELGS-DVGVTIVTPGFIESELTQGK  237 (248)
Q Consensus       200 sKaal~~l~~~la~~~~~-~i~v~~v~pg~v~T~~~~~~  237 (248)
                      ||+++++|+++++.|+++ +||||+|+||+|+|++....
T Consensus       195 sKaa~~~l~~~la~e~~~~gI~vn~v~PG~v~t~~~~~~  233 (293)
T 3rih_A          195 SKAAQLGFMRTAAIELAPRGVTVNAILPGNILTEGLVDM  233 (293)
T ss_dssp             HHHHHHHHHHHHHHHHGGGTCEEEEEEECSBCCHHHHHT
T ss_pred             HHHHHHHHHHHHHHHHhhhCeEEEEEecCCCcCcchhhc
Confidence            999999999999999987 49999999999999987644

>3edm_A Short chain dehydrogenase; structural genomics, oxidoreductase, PSI-2, P structure initiative; 2.30A {Agrobacterium tumefaciens str}

Probab=100.00  E-value=3e-40  Score=277.99  Aligned_cols=193  Identities=23%  Similarity=0.405  Sum_probs=168.4

Q ss_pred             cCCCCCEEEEcCCCChHHHHHHHHHHHcCCeEEEE-eCCcchHHHHHHHHHhhCCCcEEEEEccCCCHHHHHHHHHHHHh
Q 044010           43 EDVSGKVVIITGASSGIGEHLAYEYARRGACLALC-ARREKSLEEVADTAREIGSPDVITIRADVSKVDDCRSLVEETMN  121 (248)
Q Consensus        43 ~~~~~k~~lVtGg~~gIG~aia~~l~~~G~~V~l~-~r~~~~~~~~~~~l~~~~~~~v~~~~~D~~~~~~~~~~~~~~~~  121 (248)
                      .+++||++|||||++|||+++|++|+++|++|+++ +|+.+..++..+++++.+. ++.++.+|++|.++++++++++.+
T Consensus         4 ~~l~~k~vlVTGas~GIG~aia~~la~~G~~V~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~Dv~~~~~v~~~~~~~~~   82 (259)
T 3edm_A            4 QRFTNRTIVVAGAGRDIGRACAIRFAQEGANVVLTYNGAAEGAATAVAEIEKLGR-SALAIKADLTNAAEVEAAISAAAD   82 (259)
T ss_dssp             CTTTTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEECSSCHHHHHHHHHHHTTTS-CCEEEECCTTCHHHHHHHHHHHHH
T ss_pred             cCCCCCEEEEECCCchHHHHHHHHHHHCCCEEEEEcCCCHHHHHHHHHHHHhcCC-ceEEEEcCCCCHHHHHHHHHHHHH
Confidence            47899999999999999999999999999999998 5666667777777776554 788999999999999999999999


Q ss_pred             HcCCccEEEEccccC-CcccccccCChHHHHHHHHhhhHHHHHHHHHHhhhhhhcCCeEEEEcCcccc-ccCCCCccchH
Q 044010          122 HFGRLDHLVNNAGIS-SVALFEDIVNITDFKQIMNINFWGSVYTTRFAVPHLRYTKGKIVVLSSAASW-LTAPRMSFYNA  199 (248)
Q Consensus       122 ~~g~id~vv~~ag~~-~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~g~iV~isS~~~~-~~~~~~~~Y~~  199 (248)
                      ++|++|++|||||.. ...++.+ .+.++|++.+++|+.+++++++++.|.|++ +|+||++||..+. .+.++..+|++
T Consensus        83 ~~g~id~lv~nAg~~~~~~~~~~-~~~~~~~~~~~vN~~g~~~~~~~~~~~~~~-~g~iv~isS~~~~~~~~~~~~~Y~a  160 (259)
T 3edm_A           83 KFGEIHGLVHVAGGLIARKTIAE-MDEAFWHQVLDVNLTSLFLTAKTALPKMAK-GGAIVTFSSQAGRDGGGPGALAYAT  160 (259)
T ss_dssp             HHCSEEEEEECCCCCCCCCCTTT-CCHHHHHHHHHHHTHHHHHHHHHHGGGEEE-EEEEEEECCHHHHHCCSTTCHHHHH
T ss_pred             HhCCCCEEEECCCccCCCCChhh-CCHHHHHHHHHHHHHHHHHHHHHHHHHHhc-CCEEEEEcCHHhccCCCCCcHHHHH
Confidence            999999999999977 3444444 688999999999999999999999999974 7899999999988 67888999999


Q ss_pred             HHHHHHHHHHHHHHHhCCCeEEEEEecCccccCcccccc
Q 044010          200 SKAALVLFFETLRVELGSDVGVTIVTPGFIESELTQGKF  238 (248)
Q Consensus       200 sKaal~~l~~~la~~~~~~i~v~~v~pg~v~T~~~~~~~  238 (248)
                      ||+|+++++++++.|++++||||+|+||+++|+|.+...
T Consensus       161 sKaa~~~l~~~la~e~~~~I~vn~v~PG~v~T~~~~~~~  199 (259)
T 3edm_A          161 SKGAVMTFTRGLAKEVGPKIRVNAVCPGMISTTFHDTFT  199 (259)
T ss_dssp             HHHHHHHHHHHHHHHHTTTCEEEEEEECCBCC-------
T ss_pred             HHHHHHHHHHHHHHHHCCCCEEEEEEECCCcCccccccc
Confidence            999999999999999988899999999999999987654

>3imf_A Short chain dehydrogenase; structural genomics, infectious D center for structural genomics of infectious diseases, oxidoreductase, csgid; HET: MSE; 1.99A {Bacillus anthracis str}

Probab=100.00  E-value=6e-40  Score=275.74  Aligned_cols=192  Identities=30%  Similarity=0.491  Sum_probs=175.6

Q ss_pred             cCCCCCEEEEcCCCChHHHHHHHHHHHcCCeEEEEeCCcchHHHHHHHHHhhCCCcEEEEEccCCCHHHHHHHHHHHHhH
Q 044010           43 EDVSGKVVIITGASSGIGEHLAYEYARRGACLALCARREKSLEEVADTAREIGSPDVITIRADVSKVDDCRSLVEETMNH  122 (248)
Q Consensus        43 ~~~~~k~~lVtGg~~gIG~aia~~l~~~G~~V~l~~r~~~~~~~~~~~l~~~~~~~v~~~~~D~~~~~~~~~~~~~~~~~  122 (248)
                      .+++||++|||||++|||+++|++|+++|++|++++|+.++.++..+++++.+. ++.++.+|++|.++++++++++.++
T Consensus         2 ~~l~~k~vlVTGas~gIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~-~~~~~~~Dv~~~~~v~~~~~~~~~~   80 (257)
T 3imf_A            2 NAMKEKVVIITGGSSGMGKGMATRFAKEGARVVITGRTKEKLEEAKLEIEQFPG-QILTVQMDVRNTDDIQKMIEQIDEK   80 (257)
T ss_dssp             CTTTTCEEEETTTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHCCSTT-CEEEEECCTTCHHHHHHHHHHHHHH
T ss_pred             CCCCCCEEEEECCCCHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcCC-cEEEEEccCCCHHHHHHHHHHHHHH
Confidence            478999999999999999999999999999999999999988888888876554 7899999999999999999999999


Q ss_pred             cCCccEEEEccccCCcccccccCChHHHHHHHHhhhHHHHHHHHHHhhhhh-hc-CCeEEEEcCccccccCCCCccchHH
Q 044010          123 FGRLDHLVNNAGISSVALFEDIVNITDFKQIMNINFWGSVYTTRFAVPHLR-YT-KGKIVVLSSAASWLTAPRMSFYNAS  200 (248)
Q Consensus       123 ~g~id~vv~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~-~~-~g~iV~isS~~~~~~~~~~~~Y~~s  200 (248)
                      +|++|++|||||.....+..+ .+.++|++.+++|+.+++++++++.|.|. +. +|+||++||..+..+.++...|++|
T Consensus        81 ~g~id~lv~nAg~~~~~~~~~-~~~~~~~~~~~~n~~g~~~~~~~~~~~~~~~~~~g~iv~isS~~~~~~~~~~~~Y~as  159 (257)
T 3imf_A           81 FGRIDILINNAAGNFICPAED-LSVNGWNSVINIVLNGTFYCSQAIGKYWIEKGIKGNIINMVATYAWDAGPGVIHSAAA  159 (257)
T ss_dssp             HSCCCEEEECCCCCCCCCGGG-CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTCCCEEEEECCGGGGSCCTTCHHHHHH
T ss_pred             cCCCCEEEECCCCCCCCChhh-CCHHHHHHHHHHHhHHHHHHHHHHHHHHHhhCCCcEEEEECchhhccCCCCcHHHHHH
Confidence            999999999999877666655 57899999999999999999999999984 33 5899999999999999999999999


Q ss_pred             HHHHHHHHHHHHHHhC-C-CeEEEEEecCccccCcccc
Q 044010          201 KAALVLFFETLRVELG-S-DVGVTIVTPGFIESELTQG  236 (248)
Q Consensus       201 Kaal~~l~~~la~~~~-~-~i~v~~v~pg~v~T~~~~~  236 (248)
                      |+|+++|+++++.|++ + +||||+|+||+|+|++...
T Consensus       160 Kaa~~~l~~~la~e~~~~~gIrvn~v~PG~v~t~~~~~  197 (257)
T 3imf_A          160 KAGVLAMTKTLAVEWGRKYGIRVNAIAPGPIERTGGAD  197 (257)
T ss_dssp             HHHHHHHHHHHHHHHHHHHCCEEEEEEECCBSSCCCC-
T ss_pred             HHHHHHHHHHHHHHhccccCeEEEEEEECCCcCCcchh
Confidence            9999999999999996 5 6999999999999997654

>3tox_A Short chain dehydrogenase; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc, oxidoreductase; HET: NAP; 1.93A {Sinorhizobium meliloti}

Probab=100.00  E-value=5.7e-40  Score=279.39  Aligned_cols=192  Identities=29%  Similarity=0.445  Sum_probs=174.9

Q ss_pred             cCCCCCEEEEcCCCChHHHHHHHHHHHcCCeEEEEeCCcchHHHHHHHHHhhCCCcEEEEEccCCCHHHHHHHHHHHHhH
Q 044010           43 EDVSGKVVIITGASSGIGEHLAYEYARRGACLALCARREKSLEEVADTAREIGSPDVITIRADVSKVDDCRSLVEETMNH  122 (248)
Q Consensus        43 ~~~~~k~~lVtGg~~gIG~aia~~l~~~G~~V~l~~r~~~~~~~~~~~l~~~~~~~v~~~~~D~~~~~~~~~~~~~~~~~  122 (248)
                      .+++||++|||||++|||+++|++|+++|++|++++|+.+++++..+++++.+. ++.++.+|++|.++++++++++.++
T Consensus         4 ~~l~gk~vlVTGas~GIG~aia~~la~~G~~V~~~~r~~~~~~~~~~~~~~~~~-~~~~~~~Dv~~~~~v~~~~~~~~~~   82 (280)
T 3tox_A            4 SRLEGKIAIVTGASSGIGRAAALLFAREGAKVVVTARNGNALAELTDEIAGGGG-EAAALAGDVGDEALHEALVELAVRR   82 (280)
T ss_dssp             CTTTTCEEEESSTTSHHHHHHHHHHHHTTCEEEECCSCHHHHHHHHHHHTTTTC-CEEECCCCTTCHHHHHHHHHHHHHH
T ss_pred             cCCCCCEEEEECCCcHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHhcCC-cEEEEECCCCCHHHHHHHHHHHHHH
Confidence            468999999999999999999999999999999999999988888888876544 7899999999999999999999999


Q ss_pred             cCCccEEEEccccCCc-ccccccCChHHHHHHHHhhhHHHHHHHHHHhhhhhhc-CCeEEEEcCcccc-ccCCCCccchH
Q 044010          123 FGRLDHLVNNAGISSV-ALFEDIVNITDFKQIMNINFWGSVYTTRFAVPHLRYT-KGKIVVLSSAASW-LTAPRMSFYNA  199 (248)
Q Consensus       123 ~g~id~vv~~ag~~~~-~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~-~g~iV~isS~~~~-~~~~~~~~Y~~  199 (248)
                      +|++|++|||||.... .++.+ .+.++|++.+++|+.|++++++.+.|.|.+. .|+||++||..+. .+.++..+|++
T Consensus        83 ~g~iD~lvnnAg~~~~~~~~~~-~~~~~~~~~~~vN~~g~~~l~~~~~~~~~~~~~g~iv~isS~~~~~~~~~~~~~Y~a  161 (280)
T 3tox_A           83 FGGLDTAFNNAGALGAMGEISS-LSVEGWRETLDTNLTSAFLAAKYQVPAIAALGGGSLTFTSSFVGHTAGFAGVAPYAA  161 (280)
T ss_dssp             HSCCCEEEECCCCCCSCSCGGG-CCHHHHHHHHHHHTHHHHHHHHHHHHHHHHTTCEEEEEECCSBTTTBCCTTCHHHHH
T ss_pred             cCCCCEEEECCCCCCCCCChhh-CCHHHHHHHHHHHhHHHHHHHHHHHHHHHHcCCCEEEEEcChhhCcCCCCCchhHHH
Confidence            9999999999998744 44444 6889999999999999999999999998754 4899999999988 67888999999


Q ss_pred             HHHHHHHHHHHHHHHhCC-CeEEEEEecCccccCcccc
Q 044010          200 SKAALVLFFETLRVELGS-DVGVTIVTPGFIESELTQG  236 (248)
Q Consensus       200 sKaal~~l~~~la~~~~~-~i~v~~v~pg~v~T~~~~~  236 (248)
                      ||+|+++|+++++.|+++ +||||+|+||+|+|++...
T Consensus       162 sKaa~~~l~~~la~e~~~~gIrvn~v~PG~v~T~~~~~  199 (280)
T 3tox_A          162 SKAGLIGLVQALAVELGARGIRVNALLPGGTDTPANFA  199 (280)
T ss_dssp             HHHHHHHHHHHHHHHHHTTTEEEEEEEECSBSSTTSGG
T ss_pred             HHHHHHHHHHHHHHHhhhcCeEEEEEEECCCCCchhhh
Confidence            999999999999999977 4999999999999999765

>3i1j_A Oxidoreductase, short chain dehydrogenase/reducta; dimer, MIXE beta, structural genomics, PSI-2; 1.90A {Pseudomonas syringae PV} SCOP: c.2.1.0

Probab=100.00  E-value=1.6e-39  Score=271.06  Aligned_cols=198  Identities=30%  Similarity=0.431  Sum_probs=178.0

Q ss_pred             ccCCCCCEEEEcCCCChHHHHHHHHHHHcCCeEEEEeCCcchHHHHHHHHHhhCCCcEEEEEccC--CCHHHHHHHHHHH
Q 044010           42 SEDVSGKVVIITGASSGIGEHLAYEYARRGACLALCARREKSLEEVADTAREIGSPDVITIRADV--SKVDDCRSLVEET  119 (248)
Q Consensus        42 ~~~~~~k~~lVtGg~~gIG~aia~~l~~~G~~V~l~~r~~~~~~~~~~~l~~~~~~~v~~~~~D~--~~~~~~~~~~~~~  119 (248)
                      +++++||+++||||++|||+++|++|+++|++|++++|+.++.++..+++++.+..++.++.+|+  ++.++++++++++
T Consensus         9 ~~~l~~k~vlITGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~d~d~~~~~~~~~~~~~~   88 (247)
T 3i1j_A            9 PELLKGRVILVTGAARGIGAAAARAYAAHGASVVLLGRTEASLAEVSDQIKSAGQPQPLIIALNLENATAQQYRELAARV   88 (247)
T ss_dssp             TTTTTTCEEEESSTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHTTSCCCEEEECCTTTCCHHHHHHHHHHH
T ss_pred             CccCCCCEEEEeCCCChHHHHHHHHHHHCCCEEEEEecCHHHHHHHHHHHHhcCCCCceEEEeccccCCHHHHHHHHHHH
Confidence            45789999999999999999999999999999999999999999999988887755677777777  9999999999999


Q ss_pred             HhHcCCccEEEEccccCCcccccccCChHHHHHHHHhhhHHHHHHHHHHhhhhhhcC-CeEEEEcCccccccCCCCccch
Q 044010          120 MNHFGRLDHLVNNAGISSVALFEDIVNITDFKQIMNINFWGSVYTTRFAVPHLRYTK-GKIVVLSSAASWLTAPRMSFYN  198 (248)
Q Consensus       120 ~~~~g~id~vv~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~-g~iV~isS~~~~~~~~~~~~Y~  198 (248)
                      .+++|++|++|||||...+....+..+.++|++.+++|+.+++.+++.++|.|++++ |+||++||..+..+.++...|+
T Consensus        89 ~~~~g~id~lv~nAg~~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~~~~~iv~isS~~~~~~~~~~~~Y~  168 (247)
T 3i1j_A           89 EHEFGRLDGLLHNASIIGPRTPLEQLPDEDFMQVMHVNVNATFMLTRALLPLLKRSEDASIAFTSSSVGRKGRANWGAYG  168 (247)
T ss_dssp             HHHHSCCSEEEECCCCCCCCSCGGGSCHHHHHHHHHHHTHHHHHHHHHHHHHHTTSSSEEEEEECCGGGTSCCTTCHHHH
T ss_pred             HHhCCCCCEEEECCccCCCCCCcccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhCCCCeEEEEcchhhcCCCCCcchhH
Confidence            999999999999999864433333368899999999999999999999999997554 8999999999999999999999


Q ss_pred             HHHHHHHHHHHHHHHHhCC--CeEEEEEecCccccCccccccc
Q 044010          199 ASKAALVLFFETLRVELGS--DVGVTIVTPGFIESELTQGKFL  239 (248)
Q Consensus       199 ~sKaal~~l~~~la~~~~~--~i~v~~v~pg~v~T~~~~~~~~  239 (248)
                      +||+|+++|+++++.|+++  +||||+|+||+++|+|......
T Consensus       169 ~sK~a~~~~~~~la~e~~~~~~i~v~~v~PG~v~t~~~~~~~~  211 (247)
T 3i1j_A          169 VSKFATEGLMQTLADELEGVTAVRANSINPGATRTGMRAQAYP  211 (247)
T ss_dssp             HHHHHHHHHHHHHHHHHTTTSSEEEEEEECCCCSSHHHHHHST
T ss_pred             HHHHHHHHHHHHHHHHhcCCCCeEEEEEecCcccCccchhccc
Confidence            9999999999999999964  5999999999999999766543

>3tzq_B Short-chain type dehydrogenase/reductase; ssgcid, structural genomics, seattle structural genomics CEN infectious disease, oxidoreductase; 2.50A {Mycobacterium marinum} SCOP: c.2.1.0

Probab=100.00  E-value=1.3e-39  Score=275.70  Aligned_cols=192  Identities=27%  Similarity=0.412  Sum_probs=172.5

Q ss_pred             cccCCCCCEEEEcCCCChHHHHHHHHHHHcCCeEEEEeCCcchHHHHHHHHHhhCCCcEEEEEccCCCHHHHHHHHHHHH
Q 044010           41 FSEDVSGKVVIITGASSGIGEHLAYEYARRGACLALCARREKSLEEVADTAREIGSPDVITIRADVSKVDDCRSLVEETM  120 (248)
Q Consensus        41 ~~~~~~~k~~lVtGg~~gIG~aia~~l~~~G~~V~l~~r~~~~~~~~~~~l~~~~~~~v~~~~~D~~~~~~~~~~~~~~~  120 (248)
                      +..+++||++|||||++|||+++|++|+++|++|++++|+.+++++..+++   + .++.++.+|++|.++++++++++.
T Consensus         5 m~~~l~~k~vlVTGas~gIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~~---~-~~~~~~~~Dv~~~~~v~~~~~~~~   80 (271)
T 3tzq_B            5 MTAELENKVAIITGACGGIGLETSRVLARAGARVVLADLPETDLAGAAASV---G-RGAVHHVVDLTNEVSVRALIDFTI   80 (271)
T ss_dssp             --CTTTTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEECTTSCHHHHHHHH---C-TTCEEEECCTTCHHHHHHHHHHHH
T ss_pred             CCcCCCCCEEEEECCCcHHHHHHHHHHHHCCCEEEEEcCCHHHHHHHHHHh---C-CCeEEEECCCCCHHHHHHHHHHHH
Confidence            446899999999999999999999999999999999999999888877666   2 378899999999999999999999


Q ss_pred             hHcCCccEEEEccccCCc-ccccccCChHHHHHHHHhhhHHHHHHHHHHhhhhhhc-CCeEEEEcCccccccCCCCccch
Q 044010          121 NHFGRLDHLVNNAGISSV-ALFEDIVNITDFKQIMNINFWGSVYTTRFAVPHLRYT-KGKIVVLSSAASWLTAPRMSFYN  198 (248)
Q Consensus       121 ~~~g~id~vv~~ag~~~~-~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~-~g~iV~isS~~~~~~~~~~~~Y~  198 (248)
                      +++|++|++|||||...+ .....+.+.++|++.+++|+.++++++++++|.|.++ .|+||++||..+..+.++..+|+
T Consensus        81 ~~~g~id~lv~nAg~~~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~m~~~~~g~iv~isS~~~~~~~~~~~~Y~  160 (271)
T 3tzq_B           81 DTFGRLDIVDNNAAHSDPADMLVTQMTVDVWDDTFTVNARGTMLMCKYAIPRLISAGGGAIVNISSATAHAAYDMSTAYA  160 (271)
T ss_dssp             HHHSCCCEEEECCCCCCTTCCCGGGCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHTTCEEEEEECCGGGTSBCSSCHHHH
T ss_pred             HHcCCCCEEEECCCCCCCCCCccccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcCCCEEEEECCHHHcCCCCCChHHH
Confidence            999999999999998733 3333336789999999999999999999999999755 48999999999999999999999


Q ss_pred             HHHHHHHHHHHHHHHHhCCC-eEEEEEecCccccCcccc
Q 044010          199 ASKAALVLFFETLRVELGSD-VGVTIVTPGFIESELTQG  236 (248)
Q Consensus       199 ~sKaal~~l~~~la~~~~~~-i~v~~v~pg~v~T~~~~~  236 (248)
                      +||+|+++|+++++.|+++. ||||+|+||+++|++.+.
T Consensus       161 asKaa~~~l~~~la~e~~~~gi~vn~v~PG~v~t~~~~~  199 (271)
T 3tzq_B          161 CTKAAIETLTRYVATQYGRHGVRCNAIAPGLVRTPRLEV  199 (271)
T ss_dssp             HHHHHHHHHHHHHHHHHGGGTEEEEEEEECCBCCTTTC-
T ss_pred             HHHHHHHHHHHHHHHHHhhcCEEEEEEEeCCCcCccccc
Confidence            99999999999999999874 999999999999999873

>3tpc_A Short chain alcohol dehydrogenase-related dehydro; structural genomics, PSI-biology, NEW YORK structural genomi research consortium; 2.34A {Sinorhizobium meliloti}

Probab=100.00  E-value=5.1e-40  Score=276.02  Aligned_cols=193  Identities=24%  Similarity=0.309  Sum_probs=161.2

Q ss_pred             ccCCCCCEEEEcCCCChHHHHHHHHHHHcCCeEEEEeCCcchHHHHHHHHHhhCCCcEEEEEccCCCHHHHHHHHHHHHh
Q 044010           42 SEDVSGKVVIITGASSGIGEHLAYEYARRGACLALCARREKSLEEVADTAREIGSPDVITIRADVSKVDDCRSLVEETMN  121 (248)
Q Consensus        42 ~~~~~~k~~lVtGg~~gIG~aia~~l~~~G~~V~l~~r~~~~~~~~~~~l~~~~~~~v~~~~~D~~~~~~~~~~~~~~~~  121 (248)
                      .++++||++|||||++|||+++|++|+++|++|++++|+.++.++..+++    +.++.++.+|++|.++++++++++.+
T Consensus         2 ~~~l~~k~~lVTGas~gIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~~----~~~~~~~~~Dv~~~~~v~~~~~~~~~   77 (257)
T 3tpc_A            2 VMQLKSRVFIVTGASSGLGAAVTRMLAQEGATVLGLDLKPPAGEEPAAEL----GAAVRFRNADVTNEADATAALAFAKQ   77 (257)
T ss_dssp             --CCTTCEEEEESTTSHHHHHHHHHHHHTTCEEEEEESSCC----------------CEEEECCTTCHHHHHHHHHHHHH
T ss_pred             ccccCCCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEeCChHHHHHHHHHh----CCceEEEEccCCCHHHHHHHHHHHHH
Confidence            46789999999999999999999999999999999999998877766655    23688999999999999999999999


Q ss_pred             HcCCccEEEEccccCCccccc---ccCChHHHHHHHHhhhHHHHHHHHHHhhhhhh-------cCCeEEEEcCccccccC
Q 044010          122 HFGRLDHLVNNAGISSVALFE---DIVNITDFKQIMNINFWGSVYTTRFAVPHLRY-------TKGKIVVLSSAASWLTA  191 (248)
Q Consensus       122 ~~g~id~vv~~ag~~~~~~~~---~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~-------~~g~iV~isS~~~~~~~  191 (248)
                      ++|++|++|||||........   .+.+.++|++.+++|+.+++++++++.|.|++       .+|+||++||..+..+.
T Consensus        78 ~~g~id~lv~nAg~~~~~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~m~~~~~~~~~~~g~iv~isS~~~~~~~  157 (257)
T 3tpc_A           78 EFGHVHGLVNCAGTAPGEKILGRSGPHALDSFARTVAVNLIGTFNMIRLAAEVMSQGEPDADGERGVIVNTASIAAFDGQ  157 (257)
T ss_dssp             HHSCCCEEEECCCCCCCCCSEETTEECCHHHHHHHHHHHTHHHHHHHHHHHHHHTTSCCCTTSCCEEEEEECCTHHHHCC
T ss_pred             HcCCCCEEEECCCCCCCCccccccccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhccccCCCCCeEEEEEechhhccCC
Confidence            999999999999987655433   13567999999999999999999999999976       35899999999999999


Q ss_pred             CCCccchHHHHHHHHHHHHHHHHhCC-CeEEEEEecCccccCcccccc
Q 044010          192 PRMSFYNASKAALVLFFETLRVELGS-DVGVTIVTPGFIESELTQGKF  238 (248)
Q Consensus       192 ~~~~~Y~~sKaal~~l~~~la~~~~~-~i~v~~v~pg~v~T~~~~~~~  238 (248)
                      ++..+|++||+|+++|+++++.|+++ +||||+|+||+|+|++.....
T Consensus       158 ~~~~~Y~asKaa~~~~~~~la~e~~~~gi~vn~v~PG~v~t~~~~~~~  205 (257)
T 3tpc_A          158 IGQAAYAASKGGVAALTLPAARELARFGIRVVTIAPGIFDTPMMAGMP  205 (257)
T ss_dssp             TTCHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECCBSCC------
T ss_pred             CCCcchHHHHHHHHHHHHHHHHHHHHcCeEEEEEEeCCCCChhhccCC
Confidence            99999999999999999999999987 499999999999999987543

>4imr_A 3-oxoacyl-(acyl-carrier-protein) reductase; oxidoreductase, nicotinamide adenine dinucleotide phosphate, structural genomics; HET: NAP; 1.96A {Agrobacterium fabrum}

Probab=100.00  E-value=2.8e-40  Score=280.64  Aligned_cols=193  Identities=21%  Similarity=0.302  Sum_probs=176.7

Q ss_pred             ccCCCCCEEEEcCCCChHHHHHHHHHHHcCCeEEEEeCCcchHHHHHHHHHhhCCCcEEEEEccCCCHHHHHHHHHHHHh
Q 044010           42 SEDVSGKVVIITGASSGIGEHLAYEYARRGACLALCARREKSLEEVADTAREIGSPDVITIRADVSKVDDCRSLVEETMN  121 (248)
Q Consensus        42 ~~~~~~k~~lVtGg~~gIG~aia~~l~~~G~~V~l~~r~~~~~~~~~~~l~~~~~~~v~~~~~D~~~~~~~~~~~~~~~~  121 (248)
                      ..+++||++|||||++|||+++|++|+++|++|++++|+.++.++..+++++.+. ++.++.+|++|.++++++++++.+
T Consensus        28 ~~~l~gk~~lVTGas~GIG~aia~~la~~G~~V~~~~r~~~~~~~~~~~~~~~~~-~~~~~~~Dv~~~~~~~~~~~~~~~  106 (275)
T 4imr_A           28 IFGLRGRTALVTGSSRGIGAAIAEGLAGAGAHVILHGVKPGSTAAVQQRIIASGG-TAQELAGDLSEAGAGTDLIERAEA  106 (275)
T ss_dssp             HHCCTTCEEEETTCSSHHHHHHHHHHHHTTCEEEEEESSTTTTHHHHHHHHHTTC-CEEEEECCTTSTTHHHHHHHHHHH
T ss_pred             cCCCCCCEEEEECCCCHHHHHHHHHHHHCCCEEEEEcCCHHHHHHHHHHHHhcCC-eEEEEEecCCCHHHHHHHHHHHHH
Confidence            3578999999999999999999999999999999999999999998888877654 789999999999999999999988


Q ss_pred             HcCCccEEEEccccCCcccccccCChHHHHHHHHhhhHHHHHHHHHHhhhhhhc-CCeEEEEcCccccccCCCCccchHH
Q 044010          122 HFGRLDHLVNNAGISSVALFEDIVNITDFKQIMNINFWGSVYTTRFAVPHLRYT-KGKIVVLSSAASWLTAPRMSFYNAS  200 (248)
Q Consensus       122 ~~g~id~vv~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~-~g~iV~isS~~~~~~~~~~~~Y~~s  200 (248)
                      . |++|++|||||.....++.+ .+.++|++.+++|+.++++++++++|.|.++ .|+||++||..+..+.+...+|++|
T Consensus       107 ~-g~iD~lvnnAg~~~~~~~~~-~~~~~~~~~~~vN~~g~~~l~~~~~~~m~~~~~g~Iv~isS~~~~~~~~~~~~Y~as  184 (275)
T 4imr_A          107 I-APVDILVINASAQINATLSA-LTPNDLAFQLAVNLGSTVDMLQSALPKMVARKWGRVVSIGSINQLRPKSVVTAYAAT  184 (275)
T ss_dssp             H-SCCCEEEECCCCCCCBCGGG-CCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEEECCGGGTSCCTTBHHHHHH
T ss_pred             h-CCCCEEEECCCCCCCCCccc-CCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcCCcEEEEECCHHhCCCCCCchhhHHH
Confidence            7 99999999999887666655 5789999999999999999999999998754 4899999999999988888889999


Q ss_pred             HHHHHHHHHHHHHHhCC-CeEEEEEecCccccCccccc
Q 044010          201 KAALVLFFETLRVELGS-DVGVTIVTPGFIESELTQGK  237 (248)
Q Consensus       201 Kaal~~l~~~la~~~~~-~i~v~~v~pg~v~T~~~~~~  237 (248)
                      |+|+++|+++++.|+++ +||||+|+||+++|++....
T Consensus       185 Kaa~~~l~~~la~e~~~~gI~vn~v~PG~v~T~~~~~~  222 (275)
T 4imr_A          185 KAAQHNLIQSQARDFAGDNVLLNTLAPGLVDTDRNADR  222 (275)
T ss_dssp             HHHHHHHHHHHHHHHGGGTEEEEEEEESSBCSHHHHHH
T ss_pred             HHHHHHHHHHHHHHhcccCcEEEEEEeccccCcccccc
Confidence            99999999999999987 49999999999999987654

>3osu_A 3-oxoacyl-[acyl-carrier-protein] reductase; structural genomics, csgid, center for structural genomics O infectious diseases; 1.90A {Staphylococcus aureus subsp} SCOP: c.2.1.0 PDB: 3sj7_A*

Probab=100.00  E-value=9.1e-40  Score=272.87  Aligned_cols=191  Identities=30%  Similarity=0.484  Sum_probs=173.2

Q ss_pred             CCCCEEEEcCCCChHHHHHHHHHHHcCCeEEEEeC-CcchHHHHHHHHHhhCCCcEEEEEccCCCHHHHHHHHHHHHhHc
Q 044010           45 VSGKVVIITGASSGIGEHLAYEYARRGACLALCAR-REKSLEEVADTAREIGSPDVITIRADVSKVDDCRSLVEETMNHF  123 (248)
Q Consensus        45 ~~~k~~lVtGg~~gIG~aia~~l~~~G~~V~l~~r-~~~~~~~~~~~l~~~~~~~v~~~~~D~~~~~~~~~~~~~~~~~~  123 (248)
                      +.+|++|||||++|||+++|++|+++|++|++.+| +.++.++..+++++.+. ++.++.+|++|.++++++++++.+++
T Consensus         2 l~~k~~lVTGas~gIG~~ia~~l~~~G~~V~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~Dv~d~~~v~~~~~~~~~~~   80 (246)
T 3osu_A            2 KMTKSALVTGASRGIGRSIALQLAEEGYNVAVNYAGSKEKAEAVVEEIKAKGV-DSFAIQANVADADEVKAMIKEVVSQF   80 (246)
T ss_dssp             CCSCEEEETTCSSHHHHHHHHHHHHTTCEEEEEESSCHHHHHHHHHHHHHTTS-CEEEEECCTTCHHHHHHHHHHHHHHH
T ss_pred             CCCCEEEEECCCChHHHHHHHHHHHCCCEEEEEeCCCHHHHHHHHHHHHhcCC-cEEEEEccCCCHHHHHHHHHHHHHHc
Confidence            46899999999999999999999999999999887 45677777777776654 78999999999999999999999999


Q ss_pred             CCccEEEEccccCCcccccccCChHHHHHHHHhhhHHHHHHHHHHhhhhhh-cCCeEEEEcCccccccCCCCccchHHHH
Q 044010          124 GRLDHLVNNAGISSVALFEDIVNITDFKQIMNINFWGSVYTTRFAVPHLRY-TKGKIVVLSSAASWLTAPRMSFYNASKA  202 (248)
Q Consensus       124 g~id~vv~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~-~~g~iV~isS~~~~~~~~~~~~Y~~sKa  202 (248)
                      |++|++|||||.....+..+ .+.++|++.+++|+.+++++++++.|.|++ ..|+||++||..+..+.++..+|++||+
T Consensus        81 g~id~lv~nAg~~~~~~~~~-~~~~~~~~~~~vN~~g~~~~~~~~~~~~~~~~~g~iv~isS~~~~~~~~~~~~Y~~sK~  159 (246)
T 3osu_A           81 GSLDVLVNNAGITRDNLLMR-MKEQEWDDVIDTNLKGVFNCIQKATPQMLRQRSGAIINLSSVVGAVGNPGQANYVATKA  159 (246)
T ss_dssp             SCCCEEEECCCCCCCCCTTT-CCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEEECCHHHHHCCTTCHHHHHHHH
T ss_pred             CCCCEEEECCCCCCCCCccc-CCHHHHHHHHHHhhHHHHHHHHHHHHHHHHcCCCEEEEEcchhhcCCCCCChHHHHHHH
Confidence            99999999999887666555 578999999999999999999999999865 4589999999999999999999999999


Q ss_pred             HHHHHHHHHHHHhCCC-eEEEEEecCccccCccccc
Q 044010          203 ALVLFFETLRVELGSD-VGVTIVTPGFIESELTQGK  237 (248)
Q Consensus       203 al~~l~~~la~~~~~~-i~v~~v~pg~v~T~~~~~~  237 (248)
                      |+++++++++.|+++. ||||+|+||+++|++.+..
T Consensus       160 a~~~~~~~la~e~~~~gi~vn~v~PG~v~t~~~~~~  195 (246)
T 3osu_A          160 GVIGLTKSAARELASRGITVNAVAPGFIVSDMTDAL  195 (246)
T ss_dssp             HHHHHHHHHHHHHGGGTEEEEEEEECSBGGGCCSCS
T ss_pred             HHHHHHHHHHHHhcccCeEEEEEEECCCcCCccccc
Confidence            9999999999999874 9999999999999998754

>3r1i_A Short-chain type dehydrogenase/reductase; structural genomics, seattle structural genomics center for infectious disease, ssgcid; 1.95A {Mycobacterium marinum}

Probab=100.00  E-value=1.9e-39  Score=275.55  Aligned_cols=193  Identities=35%  Similarity=0.548  Sum_probs=176.2

Q ss_pred             cCCCCCEEEEcCCCChHHHHHHHHHHHcCCeEEEEeCCcchHHHHHHHHHhhCCCcEEEEEccCCCHHHHHHHHHHHHhH
Q 044010           43 EDVSGKVVIITGASSGIGEHLAYEYARRGACLALCARREKSLEEVADTAREIGSPDVITIRADVSKVDDCRSLVEETMNH  122 (248)
Q Consensus        43 ~~~~~k~~lVtGg~~gIG~aia~~l~~~G~~V~l~~r~~~~~~~~~~~l~~~~~~~v~~~~~D~~~~~~~~~~~~~~~~~  122 (248)
                      .+++||++|||||++|||+++|++|+++|++|++++|+.++.++..+++++.+. ++.++.+|++|.++++++++++.++
T Consensus        28 ~~l~gk~~lVTGas~GIG~aia~~la~~G~~V~~~~r~~~~~~~~~~~~~~~~~-~~~~~~~Dl~d~~~v~~~~~~~~~~  106 (276)
T 3r1i_A           28 FDLSGKRALITGASTGIGKKVALAYAEAGAQVAVAARHSDALQVVADEIAGVGG-KALPIRCDVTQPDQVRGMLDQMTGE  106 (276)
T ss_dssp             GCCTTCEEEEESTTSHHHHHHHHHHHHTTCEEEEEESSGGGGHHHHHHHHHTTC-CCEEEECCTTCHHHHHHHHHHHHHH
T ss_pred             cCCCCCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcCC-eEEEEEcCCCCHHHHHHHHHHHHHH
Confidence            478999999999999999999999999999999999999999999988887664 7889999999999999999999999


Q ss_pred             cCCccEEEEccccCCcccccccCChHHHHHHHHhhhHHHHHHHHHHhhhhhhc--CCeEEEEcCccccccC--CCCccch
Q 044010          123 FGRLDHLVNNAGISSVALFEDIVNITDFKQIMNINFWGSVYTTRFAVPHLRYT--KGKIVVLSSAASWLTA--PRMSFYN  198 (248)
Q Consensus       123 ~g~id~vv~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~--~g~iV~isS~~~~~~~--~~~~~Y~  198 (248)
                      +|++|++|||||.....++.+ .+.++|++.+++|+.+++++++.+.|.|.++  +|+||++||..+..+.  ++...|+
T Consensus       107 ~g~iD~lvnnAg~~~~~~~~~-~~~~~~~~~~~~N~~g~~~l~~~~~~~m~~~~~~g~iv~isS~~~~~~~~~~~~~~Y~  185 (276)
T 3r1i_A          107 LGGIDIAVCNAGIVSVQAMLD-MPLEEFQRIQDTNVTGVFLTAQAAARAMVDQGLGGTIITTASMSGHIINIPQQVSHYC  185 (276)
T ss_dssp             HSCCSEEEECCCCCCCCCGGG-CCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTSCEEEEEECCGGGTSCCCSSCCHHHH
T ss_pred             cCCCCEEEECCCCCCCCCccc-CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCCcEEEEECchHhcccCCCCCcchHH
Confidence            999999999999987766665 5789999999999999999999999998755  3899999999887654  3578899


Q ss_pred             HHHHHHHHHHHHHHHHhCC-CeEEEEEecCccccCccccc
Q 044010          199 ASKAALVLFFETLRVELGS-DVGVTIVTPGFIESELTQGK  237 (248)
Q Consensus       199 ~sKaal~~l~~~la~~~~~-~i~v~~v~pg~v~T~~~~~~  237 (248)
                      +||+|+++|+++++.|+++ +||||+|+||+|+|++.+..
T Consensus       186 asKaa~~~l~~~la~e~~~~gIrvn~v~PG~v~T~~~~~~  225 (276)
T 3r1i_A          186 TSKAAVVHLTKAMAVELAPHQIRVNSVSPGYIRTELVEPL  225 (276)
T ss_dssp             HHHHHHHHHHHHHHHHHGGGTEEEEEEEECCBCSTTTGGG
T ss_pred             HHHHHHHHHHHHHHHHHhhcCcEEEEEeeCCCcCCccccc
Confidence            9999999999999999987 49999999999999998754

>4e6p_A Probable sorbitol dehydrogenase (L-iditol 2-dehyd; NAD(P)-binding, structural genomics, PSI-biology; HET: MSE; 2.10A {Sinorhizobium meliloti} PDB: 1k2w_A

Probab=100.00  E-value=1.5e-39  Score=273.62  Aligned_cols=191  Identities=27%  Similarity=0.464  Sum_probs=173.8

Q ss_pred             ccCCCCCEEEEcCCCChHHHHHHHHHHHcCCeEEEEeCCcchHHHHHHHHHhhCCCcEEEEEccCCCHHHHHHHHHHHHh
Q 044010           42 SEDVSGKVVIITGASSGIGEHLAYEYARRGACLALCARREKSLEEVADTAREIGSPDVITIRADVSKVDDCRSLVEETMN  121 (248)
Q Consensus        42 ~~~~~~k~~lVtGg~~gIG~aia~~l~~~G~~V~l~~r~~~~~~~~~~~l~~~~~~~v~~~~~D~~~~~~~~~~~~~~~~  121 (248)
                      ..++++|++|||||++|||+++|++|+++|++|++++|+.++.++..+++   + .++.++.+|++|.++++++++++.+
T Consensus         3 m~~l~~k~vlVTGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~---~-~~~~~~~~D~~~~~~v~~~~~~~~~   78 (259)
T 4e6p_A            3 MKRLEGKSALITGSARGIGRAFAEAYVREGATVAIADIDIERARQAAAEI---G-PAAYAVQMDVTRQDSIDAAIAATVE   78 (259)
T ss_dssp             -CTTTTCEEEEETCSSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHH---C-TTEEEEECCTTCHHHHHHHHHHHHH
T ss_pred             cccCCCCEEEEECCCcHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHh---C-CCceEEEeeCCCHHHHHHHHHHHHH
Confidence            35789999999999999999999999999999999999988777776665   2 3688999999999999999999999


Q ss_pred             HcCCccEEEEccccCCcccccccCChHHHHHHHHhhhHHHHHHHHHHhhhhhhc--CCeEEEEcCccccccCCCCccchH
Q 044010          122 HFGRLDHLVNNAGISSVALFEDIVNITDFKQIMNINFWGSVYTTRFAVPHLRYT--KGKIVVLSSAASWLTAPRMSFYNA  199 (248)
Q Consensus       122 ~~g~id~vv~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~--~g~iV~isS~~~~~~~~~~~~Y~~  199 (248)
                      ++|++|++|||||.....+..+ .+.++|++.+++|+.+++++++.+.|.|.++  +|+||++||..+..+.++..+|++
T Consensus        79 ~~g~id~lv~~Ag~~~~~~~~~-~~~~~~~~~~~~N~~g~~~~~~~~~~~~~~~~~~g~iv~isS~~~~~~~~~~~~Y~a  157 (259)
T 4e6p_A           79 HAGGLDILVNNAALFDLAPIVE-ITRESYEKLFAINVAGTLFTLQAAARQMIAQGRGGKIINMASQAGRRGEALVAIYCA  157 (259)
T ss_dssp             HSSSCCEEEECCCCCCCBCGGG-CCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTSCEEEEEECCGGGTSCCTTBHHHHH
T ss_pred             HcCCCCEEEECCCcCCCCCccc-CCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcCCCeEEEEECChhhccCCCCChHHHH
Confidence            9999999999999887666665 5789999999999999999999999998654  589999999999999999999999


Q ss_pred             HHHHHHHHHHHHHHHhCC-CeEEEEEecCccccCccccc
Q 044010          200 SKAALVLFFETLRVELGS-DVGVTIVTPGFIESELTQGK  237 (248)
Q Consensus       200 sKaal~~l~~~la~~~~~-~i~v~~v~pg~v~T~~~~~~  237 (248)
                      ||+++++++++++.|+++ +||||+|+||+++|++.+..
T Consensus       158 sK~a~~~~~~~la~e~~~~gi~vn~v~PG~v~t~~~~~~  196 (259)
T 4e6p_A          158 TKAAVISLTQSAGLDLIKHRINVNAIAPGVVDGEHWDGV  196 (259)
T ss_dssp             HHHHHHHHHHHHHHHHGGGTEEEEEEEECCBCSTTHHHH
T ss_pred             HHHHHHHHHHHHHHHhhhcCCEEEEEEECCCccchhhhh
Confidence            999999999999999987 49999999999999987654

>4eso_A Putative oxidoreductase; NADP, structural genomics, PSI-biology, NEW structural genomics research consortium, nysgrc; HET: MSE NAP; 1.91A {Sinorhizobium meliloti} PDB: 3vc7_A

Probab=100.00  E-value=9.2e-40  Score=274.44  Aligned_cols=188  Identities=30%  Similarity=0.454  Sum_probs=172.9

Q ss_pred             cCCCCCEEEEcCCCChHHHHHHHHHHHcCCeEEEEeCCcchHHHHHHHHHhhCCCcEEEEEccCCCHHHHHHHHHHHHhH
Q 044010           43 EDVSGKVVIITGASSGIGEHLAYEYARRGACLALCARREKSLEEVADTAREIGSPDVITIRADVSKVDDCRSLVEETMNH  122 (248)
Q Consensus        43 ~~~~~k~~lVtGg~~gIG~aia~~l~~~G~~V~l~~r~~~~~~~~~~~l~~~~~~~v~~~~~D~~~~~~~~~~~~~~~~~  122 (248)
                      .+++||++|||||++|||+++|++|+++|++|++++|+.++.++..+++    +.++.++.+|++|.++++++++++.++
T Consensus         4 ~~l~gk~~lVTGas~gIG~a~a~~l~~~G~~V~~~~r~~~~~~~~~~~~----~~~~~~~~~Dv~~~~~v~~~~~~~~~~   79 (255)
T 4eso_A            4 GNYQGKKAIVIGGTHGMGLATVRRLVEGGAEVLLTGRNESNIARIREEF----GPRVHALRSDIADLNEIAVLGAAAGQT   79 (255)
T ss_dssp             CTTTTCEEEEETCSSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHH----GGGEEEEECCTTCHHHHHHHHHHHHHH
T ss_pred             cCCCCCEEEEECCCCHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHh----CCcceEEEccCCCHHHHHHHHHHHHHH
Confidence            3689999999999999999999999999999999999988777766665    237899999999999999999999999


Q ss_pred             cCCccEEEEccccCCcccccccCChHHHHHHHHhhhHHHHHHHHHHhhhhhhcCCeEEEEcCccccccCCCCccchHHHH
Q 044010          123 FGRLDHLVNNAGISSVALFEDIVNITDFKQIMNINFWGSVYTTRFAVPHLRYTKGKIVVLSSAASWLTAPRMSFYNASKA  202 (248)
Q Consensus       123 ~g~id~vv~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~g~iV~isS~~~~~~~~~~~~Y~~sKa  202 (248)
                      +|++|++|||||.....++.+ .+.++|++.+++|+.+++++++++.|.|++ +|+||++||.++..+.++..+|++||+
T Consensus        80 ~g~id~lv~nAg~~~~~~~~~-~~~~~~~~~~~~N~~g~~~~~~~~~~~~~~-~g~iv~isS~~~~~~~~~~~~Y~asKa  157 (255)
T 4eso_A           80 LGAIDLLHINAGVSELEPFDQ-VSEASYDRQFAVNTKGAFFTVQRLTPLIRE-GGSIVFTSSVADEGGHPGMSVYSASKA  157 (255)
T ss_dssp             HSSEEEEEECCCCCCCBCGGG-CCHHHHHHHHHHHTHHHHHHHHHHGGGEEE-EEEEEEECCGGGSSBCTTBHHHHHHHH
T ss_pred             hCCCCEEEECCCCCCCCChhh-CCHHHHHHHHHHhhHHHHHHHHHHHHHHhc-CCEEEEECChhhcCCCCCchHHHHHHH
Confidence            999999999999987666665 578999999999999999999999999864 689999999999999999999999999


Q ss_pred             HHHHHHHHHHHHhCCC-eEEEEEecCccccCcccc
Q 044010          203 ALVLFFETLRVELGSD-VGVTIVTPGFIESELTQG  236 (248)
Q Consensus       203 al~~l~~~la~~~~~~-i~v~~v~pg~v~T~~~~~  236 (248)
                      |+++++++++.|+++. ||||+|+||+++|++...
T Consensus       158 a~~~~~~~la~e~~~~gi~vn~v~PG~v~T~~~~~  192 (255)
T 4eso_A          158 ALVSFASVLAAELLPRGIRVNSVSPGFIDTPTKGV  192 (255)
T ss_dssp             HHHHHHHHHHHHTGGGTCEEEEEEECSBCCSSTTC
T ss_pred             HHHHHHHHHHHHHhhhCcEEEEEecCcccCccccc
Confidence            9999999999999874 999999999999998754

>4da9_A Short-chain dehydrogenase/reductase; structural genomics, protein structure initiative, PSI-biology; 2.50A {Sinorhizobium meliloti}

Probab=100.00  E-value=1.3e-39  Score=277.17  Aligned_cols=196  Identities=29%  Similarity=0.449  Sum_probs=162.1

Q ss_pred             cccCCCCCEEEEcCCCChHHHHHHHHHHHcCCeEEEEeC-CcchHHHHHHHHHhhCCCcEEEEEccCCCHHHHHHHHHHH
Q 044010           41 FSEDVSGKVVIITGASSGIGEHLAYEYARRGACLALCAR-REKSLEEVADTAREIGSPDVITIRADVSKVDDCRSLVEET  119 (248)
Q Consensus        41 ~~~~~~~k~~lVtGg~~gIG~aia~~l~~~G~~V~l~~r-~~~~~~~~~~~l~~~~~~~v~~~~~D~~~~~~~~~~~~~~  119 (248)
                      +..++++|++|||||++|||+++|++|+++|++|++++| +.+..++..+++++.+. ++.++.+|++|.++++++++++
T Consensus        23 mm~~~~~k~~lVTGas~GIG~aia~~la~~G~~V~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~Dv~d~~~v~~~~~~~  101 (280)
T 4da9_A           23 MMTQKARPVAIVTGGRRGIGLGIARALAASGFDIAITGIGDAEGVAPVIAELSGLGA-RVIFLRADLADLSSHQATVDAV  101 (280)
T ss_dssp             CCSCCCCCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESCCHHHHHHHHHHHHHTTC-CEEEEECCTTSGGGHHHHHHHH
T ss_pred             hhhccCCCEEEEecCCCHHHHHHHHHHHHCCCeEEEEeCCCHHHHHHHHHHHHhcCC-cEEEEEecCCCHHHHHHHHHHH
Confidence            345789999999999999999999999999999999996 66777777777776654 7999999999999999999999


Q ss_pred             HhHcCCccEEEEccccC--CcccccccCChHHHHHHHHhhhHHHHHHHHHHhhhhhhc----CCeEEEEcCccccccCCC
Q 044010          120 MNHFGRLDHLVNNAGIS--SVALFEDIVNITDFKQIMNINFWGSVYTTRFAVPHLRYT----KGKIVVLSSAASWLTAPR  193 (248)
Q Consensus       120 ~~~~g~id~vv~~ag~~--~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~----~g~iV~isS~~~~~~~~~  193 (248)
                      .+++|++|++|||||..  ...++.+ .+.++|++.+++|+.+++++++++.|.|.++    +|+||++||..+..+.++
T Consensus       102 ~~~~g~iD~lvnnAg~~~~~~~~~~~-~~~~~~~~~~~vN~~g~~~l~~~~~~~~~~~~~~~~g~Iv~isS~~~~~~~~~  180 (280)
T 4da9_A          102 VAEFGRIDCLVNNAGIASIVRDDFLD-LKPENFDTIVGVNLRGTVFFTQAVLKAMLASDARASRSIINITSVSAVMTSPE  180 (280)
T ss_dssp             HHHHSCCCEEEEECC------CCGGG-CCHHHHHHHTTTHHHHHHHHHHHHHHHHHHHCCCCCEEEEEECCC-------C
T ss_pred             HHHcCCCCEEEECCCccccCCCChhh-CCHHHHHHHHHHhhHHHHHHHHHHHHHHHHhCCCCCCEEEEEcchhhccCCCC
Confidence            99999999999999983  3444444 5789999999999999999999999998643    479999999999999999


Q ss_pred             CccchHHHHHHHHHHHHHHHHhCCC-eEEEEEecCccccCcccccc
Q 044010          194 MSFYNASKAALVLFFETLRVELGSD-VGVTIVTPGFIESELTQGKF  238 (248)
Q Consensus       194 ~~~Y~~sKaal~~l~~~la~~~~~~-i~v~~v~pg~v~T~~~~~~~  238 (248)
                      ..+|++||+|+++++++++.|+++. ||||+|+||+|+|++.....
T Consensus       181 ~~~Y~asKaa~~~l~~~la~e~~~~gI~vn~v~PG~v~T~~~~~~~  226 (280)
T 4da9_A          181 RLDYCMSKAGLAAFSQGLALRLAETGIAVFEVRPGIIRSDMTAAVS  226 (280)
T ss_dssp             CHHHHHHHHHHHHHHHHHHHHHTTTTEEEEEEEECCBCC-------
T ss_pred             ccHHHHHHHHHHHHHHHHHHHHHHhCcEEEEEeecCCcCCchhhcc
Confidence            9999999999999999999999875 99999999999999987653

>4fc7_A Peroxisomal 2,4-dienoyl-COA reductase; SDR/rossmann fold, peroxisomal beta-oxidation, oxidoreductas; HET: NAP COA; 1.84A {Homo sapiens} PDB: 4fc6_A*

Probab=100.00  E-value=7.4e-40  Score=278.13  Aligned_cols=191  Identities=23%  Similarity=0.310  Sum_probs=175.6

Q ss_pred             cCCCCCEEEEcCCCChHHHHHHHHHHHcCCeEEEEeCCcchHHHHHHHHHhhCCCcEEEEEccCCCHHHHHHHHHHHHhH
Q 044010           43 EDVSGKVVIITGASSGIGEHLAYEYARRGACLALCARREKSLEEVADTAREIGSPDVITIRADVSKVDDCRSLVEETMNH  122 (248)
Q Consensus        43 ~~~~~k~~lVtGg~~gIG~aia~~l~~~G~~V~l~~r~~~~~~~~~~~l~~~~~~~v~~~~~D~~~~~~~~~~~~~~~~~  122 (248)
                      .+++||++|||||++|||+++|++|+++|++|++++|+.++.++..+++.+..+.++.++.+|++|.++++++++++.++
T Consensus        23 ~~l~~k~~lVTGas~GIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~  102 (277)
T 4fc7_A           23 DLLRDKVAFITGGGSGIGFRIAEIFMRHGCHTVIASRSLPRVLTAARKLAGATGRRCLPLSMDVRAPPAVMAAVDQALKE  102 (277)
T ss_dssp             TTTTTCEEEEETTTSHHHHHHHHHHHTTTCEEEEEESCHHHHHHHHHHHHHHHSSCEEEEECCTTCHHHHHHHHHHHHHH
T ss_pred             cccCCCEEEEeCCCchHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHHhcCCcEEEEEcCCCCHHHHHHHHHHHHHH
Confidence            46899999999999999999999999999999999999988888888886654558999999999999999999999999


Q ss_pred             cCCccEEEEccccCCcccccccCChHHHHHHHHhhhHHHHHHHHHHhhhhhh-cCCeEEEEcCccccccCCCCccchHHH
Q 044010          123 FGRLDHLVNNAGISSVALFEDIVNITDFKQIMNINFWGSVYTTRFAVPHLRY-TKGKIVVLSSAASWLTAPRMSFYNASK  201 (248)
Q Consensus       123 ~g~id~vv~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~-~~g~iV~isS~~~~~~~~~~~~Y~~sK  201 (248)
                      +|++|++|||||.....+..+ .+.++|++.+++|+.++++++++++|.|.+ .+|+||++||..+..+.++...|++||
T Consensus       103 ~g~id~lv~nAg~~~~~~~~~-~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~~~g~iv~isS~~~~~~~~~~~~Y~asK  181 (277)
T 4fc7_A          103 FGRIDILINCAAGNFLCPAGA-LSFNAFKTVMDIDTSGTFNVSRVLYEKFFRDHGGVIVNITATLGNRGQALQVHAGSAK  181 (277)
T ss_dssp             HSCCCEEEECCCCCCCCCGGG-CCHHHHHHHHHHHTHHHHHHHHHHHHHTHHHHCEEEEEECCSHHHHTCTTCHHHHHHH
T ss_pred             cCCCCEEEECCcCCCCCCccc-CCHHHHHHHHHHhhHHHHHHHHHHHHHHHHcCCCEEEEECchhhCCCCCCcHHHHHHH
Confidence            999999999999877666555 578999999999999999999999999864 458999999999999999999999999


Q ss_pred             HHHHHHHHHHHHHhCC-CeEEEEEecCccccCcc
Q 044010          202 AALVLFFETLRVELGS-DVGVTIVTPGFIESELT  234 (248)
Q Consensus       202 aal~~l~~~la~~~~~-~i~v~~v~pg~v~T~~~  234 (248)
                      +|+++|+++++.|+++ +||||+|+||+|+|++.
T Consensus       182 aa~~~l~~~la~e~~~~gi~vn~v~PG~v~t~~~  215 (277)
T 4fc7_A          182 AAVDAMTRHLAVEWGPQNIRVNSLAPGPISGTEG  215 (277)
T ss_dssp             HHHHHHHHHHHHHHGGGTEEEEEEEECCBSSSHH
T ss_pred             HHHHHHHHHHHHHhhhcCeEEEEEEECCEecchh
Confidence            9999999999999987 49999999999999864

>3rku_A Oxidoreductase YMR226C; substrate fingerprint, short chain oxidoreductase, rossmann oxidoreductase; HET: NAP; 2.60A {Saccharomyces cerevisiae}

Probab=100.00  E-value=3.7e-40  Score=281.54  Aligned_cols=193  Identities=32%  Similarity=0.433  Sum_probs=175.6

Q ss_pred             cCCCCCEEEEcCCCChHHHHHHHHHHHcCC---eEEEEeCCcchHHHHHHHHHhhC-CCcEEEEEccCCCHHHHHHHHHH
Q 044010           43 EDVSGKVVIITGASSGIGEHLAYEYARRGA---CLALCARREKSLEEVADTAREIG-SPDVITIRADVSKVDDCRSLVEE  118 (248)
Q Consensus        43 ~~~~~k~~lVtGg~~gIG~aia~~l~~~G~---~V~l~~r~~~~~~~~~~~l~~~~-~~~v~~~~~D~~~~~~~~~~~~~  118 (248)
                      .+++||++|||||++|||+++|++|+++|+   +|++++|+.+++++..+++++.. +.++.++.+|++|.+++++++++
T Consensus        29 ~~l~~k~~lVTGas~GIG~aia~~l~~~G~~~~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~Dv~d~~~v~~~~~~  108 (287)
T 3rku_A           29 ERLAKKTVLITGASAGIGKATALEYLEASNGDMKLILAARRLEKLEELKKTIDQEFPNAKVHVAQLDITQAEKIKPFIEN  108 (287)
T ss_dssp             HHHTTCEEEEESTTSHHHHHHHHHHHHHHTTCSEEEEEESCHHHHHHHHHHHHHHCTTCEEEEEECCTTCGGGHHHHHHT
T ss_pred             hhcCCCEEEEecCCChHHHHHHHHHHHcCCCCceEEEEECCHHHHHHHHHHHHhhCCCCeEEEEECCCCCHHHHHHHHHH
Confidence            468999999999999999999999999998   99999999999999888887763 45789999999999999999999


Q ss_pred             HHhHcCCccEEEEccccCCcccccccCChHHHHHHHHhhhHHHHHHHHHHhhhhhhc-CCeEEEEcCccccccCCCCccc
Q 044010          119 TMNHFGRLDHLVNNAGISSVALFEDIVNITDFKQIMNINFWGSVYTTRFAVPHLRYT-KGKIVVLSSAASWLTAPRMSFY  197 (248)
Q Consensus       119 ~~~~~g~id~vv~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~-~g~iV~isS~~~~~~~~~~~~Y  197 (248)
                      +.+++|++|++|||||...+.....+.+.++|++.+++|+.|+++++++++|.|+++ .|+||++||..+..+.++..+|
T Consensus       109 ~~~~~g~iD~lVnnAG~~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~m~~~~~g~IV~isS~~~~~~~~~~~~Y  188 (287)
T 3rku_A          109 LPQEFKDIDILVNNAGKALGSDRVGQIATEDIQDVFDTNVTALINITQAVLPIFQAKNSGDIVNLGSIAGRDAYPTGSIY  188 (287)
T ss_dssp             SCGGGCSCCEEEECCCCCCCCCCTTSCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCCEEEEECCGGGTSCCTTCHHH
T ss_pred             HHHhcCCCCEEEECCCcCCCCCCcccCCHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCeEEEECChhhcCCCCCCchH
Confidence            999999999999999987633333335789999999999999999999999998754 5999999999999999999999


Q ss_pred             hHHHHHHHHHHHHHHHHhCCC-eEEEEEecCccccCccc
Q 044010          198 NASKAALVLFFETLRVELGSD-VGVTIVTPGFIESELTQ  235 (248)
Q Consensus       198 ~~sKaal~~l~~~la~~~~~~-i~v~~v~pg~v~T~~~~  235 (248)
                      ++||+|+++|+++++.|+++. ||||+|+||+|+|+|..
T Consensus       189 ~asKaa~~~l~~~la~e~~~~gIrvn~v~PG~v~T~~~~  227 (287)
T 3rku_A          189 CASKFAVGAFTDSLRKELINTKIRVILIAPGLVETEFSL  227 (287)
T ss_dssp             HHHHHHHHHHHHHHHHHTTTSSCEEEEEEESCEESSHHH
T ss_pred             HHHHHHHHHHHHHHHHHhhhcCCEEEEEeCCcCcCcccc
Confidence            999999999999999999874 99999999999999864

>3sc4_A Short chain dehydrogenase (A0QTM2 homolog); ssgcid, NIH, niaid, SBRI, UW, emerald biostructures, structu genomics; 2.50A {Mycobacterium thermoresistibile}

Probab=100.00  E-value=1.8e-39  Score=276.90  Aligned_cols=196  Identities=25%  Similarity=0.357  Sum_probs=175.8

Q ss_pred             ccCCCCCEEEEcCCCChHHHHHHHHHHHcCCeEEEEeCCcc-------hHHHHHHHHHhhCCCcEEEEEccCCCHHHHHH
Q 044010           42 SEDVSGKVVIITGASSGIGEHLAYEYARRGACLALCARREK-------SLEEVADTAREIGSPDVITIRADVSKVDDCRS  114 (248)
Q Consensus        42 ~~~~~~k~~lVtGg~~gIG~aia~~l~~~G~~V~l~~r~~~-------~~~~~~~~l~~~~~~~v~~~~~D~~~~~~~~~  114 (248)
                      .+++++|++|||||++|||+++|++|+++|++|++++|+.+       .+++..+++++.+. ++.++.+|++|.+++++
T Consensus         4 ~m~l~~k~vlVTGas~GIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~Dv~~~~~v~~   82 (285)
T 3sc4_A            4 SMSLRGKTMFISGGSRGIGLAIAKRVAADGANVALVAKSAEPHPKLPGTIYTAAKEIEEAGG-QALPIVGDIRDGDAVAA   82 (285)
T ss_dssp             --CCTTCEEEEESCSSHHHHHHHHHHHTTTCEEEEEESCCSCCSSSCCCHHHHHHHHHHHTS-EEEEEECCTTSHHHHHH
T ss_pred             CcCCCCCEEEEECCCCHHHHHHHHHHHHCCCEEEEEECChhhhhhhhHHHHHHHHHHHhcCC-cEEEEECCCCCHHHHHH
Confidence            46789999999999999999999999999999999999876       46677777777664 89999999999999999


Q ss_pred             HHHHHHhHcCCccEEEEccccCCcccccccCChHHHHHHHHhhhHHHHHHHHHHhhhhhhc-CCeEEEEcCccccccC-C
Q 044010          115 LVEETMNHFGRLDHLVNNAGISSVALFEDIVNITDFKQIMNINFWGSVYTTRFAVPHLRYT-KGKIVVLSSAASWLTA-P  192 (248)
Q Consensus       115 ~~~~~~~~~g~id~vv~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~-~g~iV~isS~~~~~~~-~  192 (248)
                      +++++.+++|++|++|||||.....++.+ .+.++|++.+++|+.+++++++++.|.|+++ .|+||++||..+..+. +
T Consensus        83 ~~~~~~~~~g~id~lvnnAg~~~~~~~~~-~~~~~~~~~~~vN~~g~~~l~~~~~~~m~~~~~g~iv~isS~~~~~~~~~  161 (285)
T 3sc4_A           83 AVAKTVEQFGGIDICVNNASAINLGSIEE-VPLKRFDLMNGIQVRGTYAVSQSCIPHMKGRDNPHILTLSPPIRLEPKWL  161 (285)
T ss_dssp             HHHHHHHHHSCCSEEEECCCCCCCCCTTT-SCHHHHHHHHHHHHHHHHHHHHHHGGGTTTSSSCEEEECCCCCCCSGGGS
T ss_pred             HHHHHHHHcCCCCEEEECCCCCCCCCccc-CCHHHHHHHHHHHhHHHHHHHHHHHHHHHHcCCcEEEEECChhhccCCCC
Confidence            99999999999999999999987666655 5789999999999999999999999999764 4899999999988875 7


Q ss_pred             CCccchHHHHHHHHHHHHHHHHhCCC-eEEEEEecC-ccccCccccccc
Q 044010          193 RMSFYNASKAALVLFFETLRVELGSD-VGVTIVTPG-FIESELTQGKFL  239 (248)
Q Consensus       193 ~~~~Y~~sKaal~~l~~~la~~~~~~-i~v~~v~pg-~v~T~~~~~~~~  239 (248)
                      +...|++||+|+++|+++++.|+++. ||||+|+|| .++|++.+....
T Consensus       162 ~~~~Y~asKaal~~~~~~la~e~~~~gI~vn~v~PG~~v~t~~~~~~~~  210 (285)
T 3sc4_A          162 RPTPYMMAKYGMTLCALGIAEELRDAGIASNTLWPRTTVATAAVQNLLG  210 (285)
T ss_dssp             CSHHHHHHHHHHHHHHHHHHHHTGGGTCEEEEEECSSCBCCHHHHHHHT
T ss_pred             CCchHHHHHHHHHHHHHHHHHHhcccCcEEEEEeCCCccccHHHHhhcc
Confidence            78999999999999999999999874 999999999 799998776543

>3lyl_A 3-oxoacyl-(acyl-carrier-protein) reductase; alpha and beta protein, NAD(P)-binding rossmann fold, csgid, oxidoreductase; 1.95A {Francisella tularensis subsp} SCOP: c.2.1.2

Probab=100.00  E-value=2.2e-39  Score=270.28  Aligned_cols=193  Identities=26%  Similarity=0.397  Sum_probs=178.1

Q ss_pred             cCCCCCEEEEcCCCChHHHHHHHHHHHcCCeEEEEeCCcchHHHHHHHHHhhCCCcEEEEEccCCCHHHHHHHHHHHHhH
Q 044010           43 EDVSGKVVIITGASSGIGEHLAYEYARRGACLALCARREKSLEEVADTAREIGSPDVITIRADVSKVDDCRSLVEETMNH  122 (248)
Q Consensus        43 ~~~~~k~~lVtGg~~gIG~aia~~l~~~G~~V~l~~r~~~~~~~~~~~l~~~~~~~v~~~~~D~~~~~~~~~~~~~~~~~  122 (248)
                      +++++|+++||||++|||+++|++|+++|++|++++|+.++.++..+++++.+. ++.++.+|++|.++++++++++.++
T Consensus         1 m~l~~k~vlITGas~gIG~~~a~~l~~~G~~v~~~~r~~~~~~~~~~~~~~~~~-~~~~~~~D~~~~~~~~~~~~~~~~~   79 (247)
T 3lyl_A            1 MSLNEKVALVTGASRGIGFEVAHALASKGATVVGTATSQASAEKFENSMKEKGF-KARGLVLNISDIESIQNFFAEIKAE   79 (247)
T ss_dssp             CTTTTCEEEESSCSSHHHHHHHHHHHHTTCEEEEEESSHHHHHHHHHHHHHTTC-CEEEEECCTTCHHHHHHHHHHHHHT
T ss_pred             CCCCCCEEEEECCCChHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcCC-ceEEEEecCCCHHHHHHHHHHHHHH
Confidence            468899999999999999999999999999999999999988888888877654 7999999999999999999999999


Q ss_pred             cCCccEEEEccccCCcccccccCChHHHHHHHHhhhHHHHHHHHHHhhhhhhc-CCeEEEEcCccccccCCCCccchHHH
Q 044010          123 FGRLDHLVNNAGISSVALFEDIVNITDFKQIMNINFWGSVYTTRFAVPHLRYT-KGKIVVLSSAASWLTAPRMSFYNASK  201 (248)
Q Consensus       123 ~g~id~vv~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~-~g~iV~isS~~~~~~~~~~~~Y~~sK  201 (248)
                      ++++|++|||||.....+..+ .+.++|++.+++|+.+++.+++.+.|.|.++ .|+||++||..+..+.++...|++||
T Consensus        80 ~~~id~li~~Ag~~~~~~~~~-~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~g~iv~isS~~~~~~~~~~~~Y~~sK  158 (247)
T 3lyl_A           80 NLAIDILVNNAGITRDNLMMR-MSEDEWQSVINTNLSSIFRMSKECVRGMMKKRWGRIISIGSVVGSAGNPGQTNYCAAK  158 (247)
T ss_dssp             TCCCSEEEECCCCCCCCCGGG-CCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEEECCTHHHHCCTTCHHHHHHH
T ss_pred             cCCCCEEEECCCCCCCCchhh-CCHHHHHHHHHHHhHHHHHHHHHHHHHHHHcCCeEEEEEcchhhccCCCCcHHHHHHH
Confidence            999999999999887666555 5789999999999999999999999998654 48999999999999999999999999


Q ss_pred             HHHHHHHHHHHHHhCC-CeEEEEEecCccccCccccc
Q 044010          202 AALVLFFETLRVELGS-DVGVTIVTPGFIESELTQGK  237 (248)
Q Consensus       202 aal~~l~~~la~~~~~-~i~v~~v~pg~v~T~~~~~~  237 (248)
                      +|+++++++++.|+++ +|+||+|+||+++|++.+..
T Consensus       159 ~a~~~~~~~la~e~~~~gi~v~~v~PG~v~t~~~~~~  195 (247)
T 3lyl_A          159 AGVIGFSKSLAYEVASRNITVNVVAPGFIATDMTDKL  195 (247)
T ss_dssp             HHHHHHHHHHHHHHGGGTEEEEEEEECSBCCTTTTTS
T ss_pred             HHHHHHHHHHHHHHHHcCeEEEEEeeCcEecccchhc
Confidence            9999999999999987 49999999999999998765

>4dyv_A Short-chain dehydrogenase/reductase SDR; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; 1.80A {Xanthobacter autotrophicus}

Probab=100.00  E-value=1.4e-39  Score=275.95  Aligned_cols=190  Identities=27%  Similarity=0.403  Sum_probs=164.9

Q ss_pred             CCCCCEEEEcCCCChHHHHHHHHHHHcCCeEEEEeCCcchHHHHHHHHHhhCCCcEEEEEccCCCHHHHHHHHHHHHhHc
Q 044010           44 DVSGKVVIITGASSGIGEHLAYEYARRGACLALCARREKSLEEVADTAREIGSPDVITIRADVSKVDDCRSLVEETMNHF  123 (248)
Q Consensus        44 ~~~~k~~lVtGg~~gIG~aia~~l~~~G~~V~l~~r~~~~~~~~~~~l~~~~~~~v~~~~~D~~~~~~~~~~~~~~~~~~  123 (248)
                      ++++|++|||||++|||+++|++|+++|++|++++|+.+++++..+++.    .++.++.+|++|.++++++++++.+++
T Consensus        25 ~~~~k~~lVTGas~GIG~aia~~la~~G~~V~~~~r~~~~~~~~~~~~~----~~~~~~~~Dv~d~~~v~~~~~~~~~~~  100 (272)
T 4dyv_A           25 KTGKKIAIVTGAGSGVGRAVAVALAGAGYGVALAGRRLDALQETAAEIG----DDALCVPTDVTDPDSVRALFTATVEKF  100 (272)
T ss_dssp             ---CCEEEETTTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHT----SCCEEEECCTTSHHHHHHHHHHHHHHH
T ss_pred             CCCCCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHhC----CCeEEEEecCCCHHHHHHHHHHHHHHc
Confidence            6789999999999999999999999999999999999888777766663    378899999999999999999999999


Q ss_pred             CCccEEEEccccCCc-ccccccCChHHHHHHHHhhhHHHHHHHHHHhhhhhhc---CCeEEEEcCccccccCCCCccchH
Q 044010          124 GRLDHLVNNAGISSV-ALFEDIVNITDFKQIMNINFWGSVYTTRFAVPHLRYT---KGKIVVLSSAASWLTAPRMSFYNA  199 (248)
Q Consensus       124 g~id~vv~~ag~~~~-~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~---~g~iV~isS~~~~~~~~~~~~Y~~  199 (248)
                      |++|++|||||...+ .++.+ .+.++|++.+++|+.+++.+++++.|.|.++   +|+||++||..+..+.++..+|++
T Consensus       101 g~iD~lVnnAg~~~~~~~~~~-~~~~~~~~~~~vN~~g~~~~~~~~~~~~~~~~~~~g~IV~isS~~~~~~~~~~~~Y~a  179 (272)
T 4dyv_A          101 GRVDVLFNNAGTGAPAIPMED-LTFAQWKQVVDTNLTGPFLCTQEAFRVMKAQEPRGGRIINNGSISATSPRPYSAPYTA  179 (272)
T ss_dssp             SCCCEEEECCCCCCCSSCGGG-CCHHHHHHHHHHHTHHHHHHHHHHHHHHHHSSSCCEEEEEECCSSTTSCCTTCHHHHH
T ss_pred             CCCCEEEECCCCCCCCCChhh-CCHHHHHHHHHhccHHHHHHHHHHHHHHHhCCCCCcEEEEECchhhcCCCCCchHHHH
Confidence            999999999998755 34444 6889999999999999999999999999765   489999999999999999999999


Q ss_pred             HHHHHHHHHHHHHHHhCCC-eEEEEEecCccccCcccccc
Q 044010          200 SKAALVLFFETLRVELGSD-VGVTIVTPGFIESELTQGKF  238 (248)
Q Consensus       200 sKaal~~l~~~la~~~~~~-i~v~~v~pg~v~T~~~~~~~  238 (248)
                      ||+|+++|+++++.|++++ ||||+|+||+|+|+|.+...
T Consensus       180 sKaa~~~l~~~la~e~~~~gI~vn~v~PG~v~T~~~~~~~  219 (272)
T 4dyv_A          180 TKHAITGLTKSTSLDGRVHDIACGQIDIGNADTPMAQKMK  219 (272)
T ss_dssp             HHHHHHHHHHHHHHHHGGGTEEEEEEEEEECC--------
T ss_pred             HHHHHHHHHHHHHHHhCccCEEEEEEEECcccChhhhhhc
Confidence            9999999999999999874 99999999999999987653

>3gvc_A Oxidoreductase, probable short-chain type dehydrogenase/reductase; ssgcid, decode, niaid, UWPPG, SBRI, structural genomics; 2.45A {Mycobacterium tuberculosis}

Probab=100.00  E-value=1.3e-39  Score=276.88  Aligned_cols=190  Identities=29%  Similarity=0.438  Sum_probs=173.0

Q ss_pred             cCCCCCEEEEcCCCChHHHHHHHHHHHcCCeEEEEeCCcchHHHHHHHHHhhCCCcEEEEEccCCCHHHHHHHHHHHHhH
Q 044010           43 EDVSGKVVIITGASSGIGEHLAYEYARRGACLALCARREKSLEEVADTAREIGSPDVITIRADVSKVDDCRSLVEETMNH  122 (248)
Q Consensus        43 ~~~~~k~~lVtGg~~gIG~aia~~l~~~G~~V~l~~r~~~~~~~~~~~l~~~~~~~v~~~~~D~~~~~~~~~~~~~~~~~  122 (248)
                      .+++||++|||||++|||+++|++|+++|++|++++|+.++.++..+++    +.++.++.+|++|.++++++++++.++
T Consensus        25 ~~l~gk~vlVTGas~gIG~aia~~la~~G~~V~~~~r~~~~~~~~~~~~----~~~~~~~~~Dv~d~~~v~~~~~~~~~~  100 (277)
T 3gvc_A           25 PDLAGKVAIVTGAGAGIGLAVARRLADEGCHVLCADIDGDAADAAATKI----GCGAAACRVDVSDEQQIIAMVDACVAA  100 (277)
T ss_dssp             --CTTCEEEETTTTSTHHHHHHHHHHHTTCEEEEEESSHHHHHHHHHHH----CSSCEEEECCTTCHHHHHHHHHHHHHH
T ss_pred             cCCCCCEEEEECCCcHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHc----CCcceEEEecCCCHHHHHHHHHHHHHH
Confidence            4789999999999999999999999999999999999988777776665    247889999999999999999999999


Q ss_pred             cCCccEEEEccccCCcccccccCChHHHHHHHHhhhHHHHHHHHHHhhhhhhc-CCeEEEEcCccccccCCCCccchHHH
Q 044010          123 FGRLDHLVNNAGISSVALFEDIVNITDFKQIMNINFWGSVYTTRFAVPHLRYT-KGKIVVLSSAASWLTAPRMSFYNASK  201 (248)
Q Consensus       123 ~g~id~vv~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~-~g~iV~isS~~~~~~~~~~~~Y~~sK  201 (248)
                      +|++|++|||||.....++.+ .+.++|++.+++|+.+++.+++++.|.|.++ +|+||++||..+..+.++..+|++||
T Consensus       101 ~g~iD~lvnnAg~~~~~~~~~-~~~~~~~~~~~vN~~g~~~l~~~~~~~m~~~~~g~Iv~isS~~~~~~~~~~~~Y~asK  179 (277)
T 3gvc_A          101 FGGVDKLVANAGVVHLASLID-TTVEDFDRVIAINLRGAWLCTKHAAPRMIERGGGAIVNLSSLAGQVAVGGTGAYGMSK  179 (277)
T ss_dssp             HSSCCEEEECCCCCCCBCTTT-CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHTTCEEEEEECCGGGTSCCTTBHHHHHHH
T ss_pred             cCCCCEEEECCCCCCCCChhh-CCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcCCcEEEEEcchhhccCCCCchhHHHHH
Confidence            999999999999987666655 5789999999999999999999999998754 58999999999999999999999999


Q ss_pred             HHHHHHHHHHHHHhCC-CeEEEEEecCccccCccccc
Q 044010          202 AALVLFFETLRVELGS-DVGVTIVTPGFIESELTQGK  237 (248)
Q Consensus       202 aal~~l~~~la~~~~~-~i~v~~v~pg~v~T~~~~~~  237 (248)
                      +|+++|+++++.|+++ +||||+|+||+|+|++.+..
T Consensus       180 aa~~~l~~~la~e~~~~gI~vn~v~PG~v~t~~~~~~  216 (277)
T 3gvc_A          180 AGIIQLSRITAAELRSSGIRSNTLLPAFVDTPMQQTA  216 (277)
T ss_dssp             HHHHHHHHHHHHHHGGGTEEEEEEEECSBCCHHHHHH
T ss_pred             HHHHHHHHHHHHHhcccCeEEEEEeeCCccCchHHHh
Confidence            9999999999999987 49999999999999987654

>4dqx_A Probable oxidoreductase protein; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; 2.00A {Rhizobium etli}

Probab=100.00  E-value=2.1e-39  Score=275.50  Aligned_cols=189  Identities=29%  Similarity=0.466  Sum_probs=172.7

Q ss_pred             cCCCCCEEEEcCCCChHHHHHHHHHHHcCCeEEEEeCCcchHHHHHHHHHhhCCCcEEEEEccCCCHHHHHHHHHHHHhH
Q 044010           43 EDVSGKVVIITGASSGIGEHLAYEYARRGACLALCARREKSLEEVADTAREIGSPDVITIRADVSKVDDCRSLVEETMNH  122 (248)
Q Consensus        43 ~~~~~k~~lVtGg~~gIG~aia~~l~~~G~~V~l~~r~~~~~~~~~~~l~~~~~~~v~~~~~D~~~~~~~~~~~~~~~~~  122 (248)
                      +++++|++|||||++|||+++|++|+++|++|++++|+.+++++..+++   + .++.++.+|++|.++++++++++.++
T Consensus        23 ~~l~~k~vlVTGas~GIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~~---~-~~~~~~~~Dv~d~~~v~~~~~~~~~~   98 (277)
T 4dqx_A           23 MDLNQRVCIVTGGGSGIGRATAELFAKNGAYVVVADVNEDAAVRVANEI---G-SKAFGVRVDVSSAKDAESMVEKTTAK   98 (277)
T ss_dssp             CTTTTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESSHHHHHHHHHHH---C-TTEEEEECCTTCHHHHHHHHHHHHHH
T ss_pred             CCCCCCEEEEECCCcHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHh---C-CceEEEEecCCCHHHHHHHHHHHHHH
Confidence            6789999999999999999999999999999999999988777666553   3 37889999999999999999999999


Q ss_pred             cCCccEEEEccccCCcccccccCChHHHHHHHHhhhHHHHHHHHHHhhhhhhc-CCeEEEEcCccccccCCCCccchHHH
Q 044010          123 FGRLDHLVNNAGISSVALFEDIVNITDFKQIMNINFWGSVYTTRFAVPHLRYT-KGKIVVLSSAASWLTAPRMSFYNASK  201 (248)
Q Consensus       123 ~g~id~vv~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~-~g~iV~isS~~~~~~~~~~~~Y~~sK  201 (248)
                      +|++|++|||||.....+..+ .+.++|++.+++|+.++++++++++|.|+++ .|+||++||..+..+.++..+|++||
T Consensus        99 ~g~iD~lv~nAg~~~~~~~~~-~~~~~~~~~~~vN~~g~~~~~~~~~~~~~~~~~g~iv~isS~~~~~~~~~~~~Y~asK  177 (277)
T 4dqx_A           99 WGRVDVLVNNAGFGTTGNVVT-IPEETWDRIMSVNVKGIFLCSKYVIPVMRRNGGGSIINTTSYTATSAIADRTAYVASK  177 (277)
T ss_dssp             HSCCCEEEECCCCCCCBCTTT-SCHHHHHHHHHHHTHHHHHHHHHHHHHHTTTTCEEEEEECCGGGTSCCTTBHHHHHHH
T ss_pred             cCCCCEEEECCCcCCCCCccc-CCHHHHHHHHHHhhHHHHHHHHHHHHHHHHcCCcEEEEECchhhCcCCCCChhHHHHH
Confidence            999999999999887666655 5789999999999999999999999999755 48999999999999999999999999


Q ss_pred             HHHHHHHHHHHHHhCCC-eEEEEEecCccccCcccc
Q 044010          202 AALVLFFETLRVELGSD-VGVTIVTPGFIESELTQG  236 (248)
Q Consensus       202 aal~~l~~~la~~~~~~-i~v~~v~pg~v~T~~~~~  236 (248)
                      +|+++|+++++.|+++. ||||+|+||+++|+|...
T Consensus       178 aa~~~l~~~la~e~~~~gi~vn~v~PG~v~T~~~~~  213 (277)
T 4dqx_A          178 GAISSLTRAMAMDHAKEGIRVNAVAPGTIDSPYFTK  213 (277)
T ss_dssp             HHHHHHHHHHHHHHGGGTEEEEEEEECSBCCHHHHH
T ss_pred             HHHHHHHHHHHHHhhhcCeEEEEEeeCcCcCchhhh
Confidence            99999999999999874 999999999999998443

>3e03_A Short chain dehydrogenase; structural genomics, PSI-2, protein structure initiative, NEW YORK structural genomix research consortium; 1.69A {Xanthomonas campestris PV}

Probab=100.00  E-value=1.8e-39  Score=275.28  Aligned_cols=192  Identities=28%  Similarity=0.391  Sum_probs=169.9

Q ss_pred             cCCCCCEEEEcCCCChHHHHHHHHHHHcCCeEEEEeCCcch-------HHHHHHHHHhhCCCcEEEEEccCCCHHHHHHH
Q 044010           43 EDVSGKVVIITGASSGIGEHLAYEYARRGACLALCARREKS-------LEEVADTAREIGSPDVITIRADVSKVDDCRSL  115 (248)
Q Consensus        43 ~~~~~k~~lVtGg~~gIG~aia~~l~~~G~~V~l~~r~~~~-------~~~~~~~l~~~~~~~v~~~~~D~~~~~~~~~~  115 (248)
                      ++++||++|||||++|||+++|++|+++|++|++++|+.++       +++..+++++.+. ++.++.+|++|.++++++
T Consensus         2 ~~l~~k~~lVTGas~GIG~aia~~la~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~Dv~~~~~v~~~   80 (274)
T 3e03_A            2 LTLSGKTLFITGASRGIGLAIALRAARDGANVAIAAKSAVANPKLPGTIHSAAAAVNAAGG-QGLALKCDIREEDQVRAA   80 (274)
T ss_dssp             CCCTTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESCCSCCTTSCCCHHHHHHHHHHHTS-EEEEEECCTTCHHHHHHH
T ss_pred             CCCCCcEEEEECCCChHHHHHHHHHHHCCCEEEEEeccchhhhhhHHHHHHHHHHHHhcCC-eEEEEeCCCCCHHHHHHH
Confidence            57899999999999999999999999999999999998764       5666666766654 889999999999999999


Q ss_pred             HHHHHhHcCCccEEEEccccCCcccccccCChHHHHHHHHhhhHHHHHHHHHHhhhhhhcC-CeEEEEcCcccccc--CC
Q 044010          116 VEETMNHFGRLDHLVNNAGISSVALFEDIVNITDFKQIMNINFWGSVYTTRFAVPHLRYTK-GKIVVLSSAASWLT--AP  192 (248)
Q Consensus       116 ~~~~~~~~g~id~vv~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~-g~iV~isS~~~~~~--~~  192 (248)
                      ++++.+++|++|++|||||.....+..+ .+.++|++.+++|+.+++.++++++|.|++++ |+||++||..+..+  .+
T Consensus        81 ~~~~~~~~g~iD~lvnnAG~~~~~~~~~-~~~~~~~~~~~vN~~g~~~l~~~~~~~m~~~~~g~iv~isS~~~~~~~~~~  159 (274)
T 3e03_A           81 VAATVDTFGGIDILVNNASAIWLRGTLD-TPMKRFDLMQQVNARGSFVCAQACLPHLLQAPNPHILTLAPPPSLNPAWWG  159 (274)
T ss_dssp             HHHHHHHHSCCCEEEECCCCCCCCCGGG-SCHHHHHHHHHHTHHHHHHHHHHHHHHHTTSSSCEEEECCCCCCCCHHHHH
T ss_pred             HHHHHHHcCCCCEEEECCCcccCCCccc-CCHHHHHHHHhHhhHhHHHHHHHHHHHHHhcCCceEEEECChHhcCCCCCC
Confidence            9999999999999999999887766665 57899999999999999999999999997554 89999999998887  67


Q ss_pred             CCccchHHHHHHHHHHHHHHHHhCCC-eEEEEEecC-ccccCcccc
Q 044010          193 RMSFYNASKAALVLFFETLRVELGSD-VGVTIVTPG-FIESELTQG  236 (248)
Q Consensus       193 ~~~~Y~~sKaal~~l~~~la~~~~~~-i~v~~v~pg-~v~T~~~~~  236 (248)
                      +..+|++||+|+++|+++++.|++++ ||||+|+|| .++|+|.+.
T Consensus       160 ~~~~Y~asKaal~~l~~~la~e~~~~gI~vn~v~PG~~v~T~~~~~  205 (274)
T 3e03_A          160 AHTGYTLAKMGMSLVTLGLAAEFGPQGVAINALWPRTVIATDAINM  205 (274)
T ss_dssp             HCHHHHHHHHHHHHHHHHHHHHHGGGTCEEEEEECSBCBCC-----
T ss_pred             CCchHHHHHHHHHHHHHHHHHHhhhcCEEEEEEECCcccccchhhh
Confidence            78899999999999999999999875 999999999 699999743

>3is3_A 17BETA-hydroxysteroid dehydrogenase; short chain dehydrogenase/REDU SDR, fungi, oxidoreductase; HET: GOL; 1.48A {Cochliobolus lunatus} PDB: 3qwf_A* 3qwh_A* 3qwi_A* 3itd_A

Probab=100.00  E-value=2.6e-39  Score=273.72  Aligned_cols=194  Identities=30%  Similarity=0.521  Sum_probs=174.3

Q ss_pred             ccccCCCCCEEEEcCCCChHHHHHHHHHHHcCCeEEEEeCC-cchHHHHHHHHHhhCCCcEEEEEccCCCHHHHHHHHHH
Q 044010           40 IFSEDVSGKVVIITGASSGIGEHLAYEYARRGACLALCARR-EKSLEEVADTAREIGSPDVITIRADVSKVDDCRSLVEE  118 (248)
Q Consensus        40 ~~~~~~~~k~~lVtGg~~gIG~aia~~l~~~G~~V~l~~r~-~~~~~~~~~~l~~~~~~~v~~~~~D~~~~~~~~~~~~~  118 (248)
                      .++.+++||++|||||++|||+++|++|+++|++|++++++ .+..++..+++++.+. ++.++.+|++|.+++++++++
T Consensus        11 ~~~~~l~~k~~lVTGas~gIG~aia~~l~~~G~~V~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~Dv~~~~~v~~~~~~   89 (270)
T 3is3_A           11 YIPGRLDGKVALVTGSGRGIGAAVAVHLGRLGAKVVVNYANSTKDAEKVVSEIKALGS-DAIAIKADIRQVPEIVKLFDQ   89 (270)
T ss_dssp             CCTTCCTTCEEEESCTTSHHHHHHHHHHHHTTCEEEEEESSCHHHHHHHHHHHHHTTC-CEEEEECCTTSHHHHHHHHHH
T ss_pred             cCCCCcCCCEEEEECCCchHHHHHHHHHHHCCCEEEEEcCCCHHHHHHHHHHHHhcCC-cEEEEEcCCCCHHHHHHHHHH
Confidence            34568999999999999999999999999999999998765 5556777777776654 789999999999999999999


Q ss_pred             HHhHcCCccEEEEccccCCcccccccCChHHHHHHHHhhhHHHHHHHHHHhhhhhhcCCeEEEEcCcc-ccccCCCCccc
Q 044010          119 TMNHFGRLDHLVNNAGISSVALFEDIVNITDFKQIMNINFWGSVYTTRFAVPHLRYTKGKIVVLSSAA-SWLTAPRMSFY  197 (248)
Q Consensus       119 ~~~~~g~id~vv~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~g~iV~isS~~-~~~~~~~~~~Y  197 (248)
                      +.+++|++|++|||||.....++.+ .+.++|++.+++|+.+++++++++.|.|.+ +|+||++||.. +..+.++..+|
T Consensus        90 ~~~~~g~id~lvnnAg~~~~~~~~~-~~~~~~~~~~~~N~~g~~~~~~~~~~~~~~-~g~iv~isS~~~~~~~~~~~~~Y  167 (270)
T 3is3_A           90 AVAHFGHLDIAVSNSGVVSFGHLKD-VTEEEFDRVFSLNTRGQFFVAREAYRHLTE-GGRIVLTSSNTSKDFSVPKHSLY  167 (270)
T ss_dssp             HHHHHSCCCEEECCCCCCCCCCGGG-CCHHHHHHHHHHHTHHHHHHHHHHHHHCCT-TCEEEEECCTTTTTCCCTTCHHH
T ss_pred             HHHHcCCCCEEEECCCCCCCCCccc-CCHHHHHHHHHHHhHHHHHHHHHHHHHHhc-CCeEEEEeCchhccCCCCCCchh
Confidence            9999999999999999987666655 578999999999999999999999999974 78999999988 56778889999


Q ss_pred             hHHHHHHHHHHHHHHHHhCCC-eEEEEEecCccccCcccc
Q 044010          198 NASKAALVLFFETLRVELGSD-VGVTIVTPGFIESELTQG  236 (248)
Q Consensus       198 ~~sKaal~~l~~~la~~~~~~-i~v~~v~pg~v~T~~~~~  236 (248)
                      ++||+|+++|+++++.|+++. ||||+|+||+++|+|.+.
T Consensus       168 ~asKaa~~~~~~~la~e~~~~gi~vn~v~PG~v~T~~~~~  207 (270)
T 3is3_A          168 SGSKGAVDSFVRIFSKDCGDKKITVNAVAPGGTVTDMFHE  207 (270)
T ss_dssp             HHHHHHHHHHHHHHHHHHGGGTCEEEEEEECSBCSTTHHH
T ss_pred             HHHHHHHHHHHHHHHHHhcccCeEEEEEEeCCccChhhhh
Confidence            999999999999999999874 999999999999999764

>3zv4_A CIS-2,3-dihydrobiphenyl-2,3-DIOL dehydrogenase; oxidoreductase, short chain dehydrogenase/oxidoreductase, SD comamonas testosteroni; 1.80A {Pandoraea pnomenusa} SCOP: c.2.1.2 PDB: 2y99_A* 3zv3_A 2y93_A 3zv5_A* 3zv6_A* 1bdb_A*

Probab=100.00  E-value=2.1e-39  Score=275.90  Aligned_cols=190  Identities=26%  Similarity=0.426  Sum_probs=167.4

Q ss_pred             cCCCCCEEEEcCCCChHHHHHHHHHHHcCCeEEEEeCCcchHHHHHHHHHhhCCCcEEEEEccCCCHHHHHHHHHHHHhH
Q 044010           43 EDVSGKVVIITGASSGIGEHLAYEYARRGACLALCARREKSLEEVADTAREIGSPDVITIRADVSKVDDCRSLVEETMNH  122 (248)
Q Consensus        43 ~~~~~k~~lVtGg~~gIG~aia~~l~~~G~~V~l~~r~~~~~~~~~~~l~~~~~~~v~~~~~D~~~~~~~~~~~~~~~~~  122 (248)
                      |+++||++|||||++|||+++|++|+++|++|++++|+.+++++..+++    +.++.++.+|++|.++++++++++.++
T Consensus         1 M~l~gk~~lVTGas~GIG~aia~~la~~G~~V~~~~r~~~~~~~~~~~~----~~~~~~~~~Dv~~~~~v~~~~~~~~~~   76 (281)
T 3zv4_A            1 MKLTGEVALITGGASGLGRALVDRFVAEGARVAVLDKSAERLRELEVAH----GGNAVGVVGDVRSLQDQKRAAERCLAA   76 (281)
T ss_dssp             CTTTTCEEEEETCSSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHT----BTTEEEEECCTTCHHHHHHHHHHHHHH
T ss_pred             CCcCCCEEEEECCCcHHHHHHHHHHHHCcCEEEEEeCCHHHHHHHHHHc----CCcEEEEEcCCCCHHHHHHHHHHHHHh
Confidence            4689999999999999999999999999999999999987766554432    347899999999999999999999999


Q ss_pred             cCCccEEEEccccCCcccc-cc---cCChHHHHHHHHhhhHHHHHHHHHHhhhhhhcCCeEEEEcCccccccCCCCccch
Q 044010          123 FGRLDHLVNNAGISSVALF-ED---IVNITDFKQIMNINFWGSVYTTRFAVPHLRYTKGKIVVLSSAASWLTAPRMSFYN  198 (248)
Q Consensus       123 ~g~id~vv~~ag~~~~~~~-~~---~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~g~iV~isS~~~~~~~~~~~~Y~  198 (248)
                      +|++|++|||||....... .+   +.+.++|++.+++|+.+++.+++++.|.|.+++|+||++||..+..+.++...|+
T Consensus        77 ~g~iD~lvnnAg~~~~~~~~~~~~~~~~~~~~~~~~~vN~~g~~~~~~~~~~~~~~~~g~iv~isS~~~~~~~~~~~~Y~  156 (281)
T 3zv4_A           77 FGKIDTLIPNAGIWDYSTALADLPEDKIDAAFDDIFHVNVKGYIHAVKACLPALVSSRGSVVFTISNAGFYPNGGGPLYT  156 (281)
T ss_dssp             HSCCCEEECCCCCCCTTCCGGGSCTTTHHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEECCGGGTSSSSSCHHHH
T ss_pred             cCCCCEEEECCCcCccccccccCChhhhHHHHHHHHhhhhHHHHHHHHHHHHHHHhcCCeEEEEecchhccCCCCCchhH
Confidence            9999999999998643322 11   2235689999999999999999999999987789999999999999999999999


Q ss_pred             HHHHHHHHHHHHHHHHhCCCeEEEEEecCccccCcccc
Q 044010          199 ASKAALVLFFETLRVELGSDVGVTIVTPGFIESELTQG  236 (248)
Q Consensus       199 ~sKaal~~l~~~la~~~~~~i~v~~v~pg~v~T~~~~~  236 (248)
                      +||+|+++|+++++.|++++||||+|+||+++|+|...
T Consensus       157 asKaa~~~l~~~la~e~~~~Irvn~v~PG~v~T~~~~~  194 (281)
T 3zv4_A          157 ATKHAVVGLVRQMAFELAPHVRVNGVAPGGMNTDLRGP  194 (281)
T ss_dssp             HHHHHHHHHHHHHHHHHTTTSEEEEEEECSSCC--CCC
T ss_pred             HHHHHHHHHHHHHHHHhcCCCEEEEEECCcCcCCcccc
Confidence            99999999999999999888999999999999998754

>3sju_A Keto reductase; short-chain dehydrogenase, oxidoreductase; HET: NDP; 2.40A {Streptomyces griseoruber}

Probab=100.00  E-value=1.5e-39  Score=276.58  Aligned_cols=192  Identities=28%  Similarity=0.397  Sum_probs=173.6

Q ss_pred             CCCCCEEEEcCCCChHHHHHHHHHHHcCCeEEEEeCCcchHHHHHHHHHhhCCCcEEEEEccCCCHHHHHHHHHHHHhHc
Q 044010           44 DVSGKVVIITGASSGIGEHLAYEYARRGACLALCARREKSLEEVADTAREIGSPDVITIRADVSKVDDCRSLVEETMNHF  123 (248)
Q Consensus        44 ~~~~k~~lVtGg~~gIG~aia~~l~~~G~~V~l~~r~~~~~~~~~~~l~~~~~~~v~~~~~D~~~~~~~~~~~~~~~~~~  123 (248)
                      -+++|++|||||++|||+++|++|+++|++|++++|+.++.++..+++++.+. ++.++.+|++|.++++++++++.+++
T Consensus        21 m~~~k~~lVTGas~GIG~aia~~la~~G~~V~~~~r~~~~~~~~~~~l~~~~~-~~~~~~~Dv~d~~~v~~~~~~~~~~~   99 (279)
T 3sju_A           21 MSRPQTAFVTGVSSGIGLAVARTLAARGIAVYGCARDAKNVSAAVDGLRAAGH-DVDGSSCDVTSTDEVHAAVAAAVERF   99 (279)
T ss_dssp             ----CEEEEESTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHTTTC-CEEEEECCTTCHHHHHHHHHHHHHHH
T ss_pred             ccCCCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcCC-cEEEEECCCCCHHHHHHHHHHHHHHc
Confidence            35799999999999999999999999999999999999998888888877654 79999999999999999999999999


Q ss_pred             CCccEEEEccccCCcccccccCChHHHHHHHHhhhHHHHHHHHHHhh--hhhh-cCCeEEEEcCccccccCCCCccchHH
Q 044010          124 GRLDHLVNNAGISSVALFEDIVNITDFKQIMNINFWGSVYTTRFAVP--HLRY-TKGKIVVLSSAASWLTAPRMSFYNAS  200 (248)
Q Consensus       124 g~id~vv~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~--~~~~-~~g~iV~isS~~~~~~~~~~~~Y~~s  200 (248)
                      |++|++|||||.....+..+ .+.++|++.+++|+.+++.+++.++|  .|.+ ..|+||++||..+..+.++..+|++|
T Consensus       100 g~id~lv~nAg~~~~~~~~~-~~~~~~~~~~~vN~~g~~~l~~~~~~~~~~~~~~~g~iV~isS~~~~~~~~~~~~Y~as  178 (279)
T 3sju_A          100 GPIGILVNSAGRNGGGETAD-LDDALWADVLDTNLTGVFRVTREVLRAGGMREAGWGRIVNIASTGGKQGVMYAAPYTAS  178 (279)
T ss_dssp             CSCCEEEECCCCCCCSCGGG-CCHHHHHHHHHHHTHHHHHHHHHHHHHSSHHHHTCEEEEEECCGGGTSCCTTCHHHHHH
T ss_pred             CCCcEEEECCCCCCCCChhh-CCHHHHHHHHHHHhHHHHHHHHHHhchhhHhhcCCcEEEEECChhhccCCCCChhHHHH
Confidence            99999999999887766665 57899999999999999999999999  5654 44899999999999999999999999


Q ss_pred             HHHHHHHHHHHHHHhCC-CeEEEEEecCccccCccccc
Q 044010          201 KAALVLFFETLRVELGS-DVGVTIVTPGFIESELTQGK  237 (248)
Q Consensus       201 Kaal~~l~~~la~~~~~-~i~v~~v~pg~v~T~~~~~~  237 (248)
                      |+|+++|+++++.|+++ +||||+|+||+|+|+|.+..
T Consensus       179 Kaa~~~l~~~la~e~~~~gi~vn~v~PG~v~T~~~~~~  216 (279)
T 3sju_A          179 KHGVVGFTKSVGFELAKTGITVNAVCPGYVETPMAERV  216 (279)
T ss_dssp             HHHHHHHHHHHHHHTGGGTEEEEEEEESSBCSHHHHHH
T ss_pred             HHHHHHHHHHHHHHHHhhCcEEEEEeeCcccchHHHHH
Confidence            99999999999999987 49999999999999997654

>3rkr_A Short chain oxidoreductase; rossmann fold; HET: NAP; 2.42A {Uncultured bacterium BIO5}

Probab=100.00  E-value=4.5e-39  Score=271.05  Aligned_cols=194  Identities=27%  Similarity=0.379  Sum_probs=170.2

Q ss_pred             cCCCCCEEEEcCCCChHHHHHHHHHHHcCCeEEEEeCCcchHHHHHHHHHhhCCCcEEEEEccCCCHHHHHHHHHHHHhH
Q 044010           43 EDVSGKVVIITGASSGIGEHLAYEYARRGACLALCARREKSLEEVADTAREIGSPDVITIRADVSKVDDCRSLVEETMNH  122 (248)
Q Consensus        43 ~~~~~k~~lVtGg~~gIG~aia~~l~~~G~~V~l~~r~~~~~~~~~~~l~~~~~~~v~~~~~D~~~~~~~~~~~~~~~~~  122 (248)
                      .++++|++|||||++|||+++|++|+++|++|++++|+.+++++..+++.+.+. ++.++.+|++|.++++++++++.+.
T Consensus        25 ~~l~~k~vlITGas~gIG~~la~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~-~~~~~~~D~~~~~~v~~~~~~~~~~  103 (262)
T 3rkr_A           25 SSLSGQVAVVTGASRGIGAAIARKLGSLGARVVLTARDVEKLRAVEREIVAAGG-EAESHACDLSHSDAIAAFATGVLAA  103 (262)
T ss_dssp             CTTTTCEEEESSTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHTTC-EEEEEECCTTCHHHHHHHHHHHHHH
T ss_pred             hccCCCEEEEECCCChHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHHhCC-ceeEEEecCCCHHHHHHHHHHHHHh
Confidence            468899999999999999999999999999999999999999988888877654 7899999999999999999999999


Q ss_pred             cCCccEEEEccccCC-cccccccCChHHHHHHHHhhhHHHHHHHHHHhhhhhhc-CCeEEEEcCccccccCCCCccchHH
Q 044010          123 FGRLDHLVNNAGISS-VALFEDIVNITDFKQIMNINFWGSVYTTRFAVPHLRYT-KGKIVVLSSAASWLTAPRMSFYNAS  200 (248)
Q Consensus       123 ~g~id~vv~~ag~~~-~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~-~g~iV~isS~~~~~~~~~~~~Y~~s  200 (248)
                      +|++|++|||||... ..+..+ .+.++|++.+++|+.+++.+++.+.|.|.+. .|+||++||..+..+.++...|++|
T Consensus       104 ~g~id~lv~~Ag~~~~~~~~~~-~~~~~~~~~~~vN~~g~~~l~~~~~~~~~~~~~g~iv~isS~~~~~~~~~~~~Y~as  182 (262)
T 3rkr_A          104 HGRCDVLVNNAGVGWFGGPLHT-MKPAEWDALIAVNLKAPYLLLRAFAPAMIAAKRGHIINISSLAGKNPVADGAAYTAS  182 (262)
T ss_dssp             HSCCSEEEECCCCCCCSSCGGG-SCHHHHHHHHHHHTHHHHHHHHHHHHHHHHTTCCEEEEECSSCSSCCCTTCHHHHHH
T ss_pred             cCCCCEEEECCCccCCCCCccc-CCHHHHHHHHHHHhHHHHHHHHHHHHHHHhCCCceEEEEechhhcCCCCCCchHHHH
Confidence            999999999999843 344444 5789999999999999999999999998754 4999999999999999999999999


Q ss_pred             HHHHHHHHHHHHHHhCC-CeEEEEEecCccccCcccccc
Q 044010          201 KAALVLFFETLRVELGS-DVGVTIVTPGFIESELTQGKF  238 (248)
Q Consensus       201 Kaal~~l~~~la~~~~~-~i~v~~v~pg~v~T~~~~~~~  238 (248)
                      |+++++++++++.|+++ +|+||+|+||+++|+|.....
T Consensus       183 Kaa~~~l~~~la~e~~~~gi~v~~v~PG~v~t~~~~~~~  221 (262)
T 3rkr_A          183 KWGLNGLMTSAAEELRQHQVRVSLVAPGSVRTEFGVGLS  221 (262)
T ss_dssp             HHHHHHHHHHHHHHHGGGTCEEEEEEECCC---------
T ss_pred             HHHHHHHHHHHHHHhhhcCcEEEEEecCCCcCCcccccc
Confidence            99999999999999987 499999999999999987644

>3u5t_A 3-oxoacyl-[acyl-carrier-protein] reductase; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; 2.40A {Sinorhizobium meliloti}

Probab=100.00  E-value=1.2e-39  Score=275.51  Aligned_cols=192  Identities=32%  Similarity=0.440  Sum_probs=166.0

Q ss_pred             cCCCCCEEEEcCCCChHHHHHHHHHHHcCCeEEEE-eCCcchHHHHHHHHHhhCCCcEEEEEccCCCHHHHHHHHHHHHh
Q 044010           43 EDVSGKVVIITGASSGIGEHLAYEYARRGACLALC-ARREKSLEEVADTAREIGSPDVITIRADVSKVDDCRSLVEETMN  121 (248)
Q Consensus        43 ~~~~~k~~lVtGg~~gIG~aia~~l~~~G~~V~l~-~r~~~~~~~~~~~l~~~~~~~v~~~~~D~~~~~~~~~~~~~~~~  121 (248)
                      +.++||++|||||++|||+++|++|+++|++|++. .|+.+..++..+++++.+. ++.++.+|++|.++++++++++.+
T Consensus        23 m~~~~k~~lVTGas~GIG~aia~~la~~G~~Vv~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~Dl~~~~~v~~~~~~~~~  101 (267)
T 3u5t_A           23 MMETNKVAIVTGASRGIGAAIAARLASDGFTVVINYAGKAAAAEEVAGKIEAAGG-KALTAQADVSDPAAVRRLFATAEE  101 (267)
T ss_dssp             ----CCEEEEESCSSHHHHHHHHHHHHHTCEEEEEESSCSHHHHHHHHHHHHTTC-CEEEEECCTTCHHHHHHHHHHHHH
T ss_pred             cccCCCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEcCCCHHHHHHHHHHHHhcCC-eEEEEEcCCCCHHHHHHHHHHHHH
Confidence            45689999999999999999999999999999988 4566667777777776654 789999999999999999999999


Q ss_pred             HcCCccEEEEccccCCcccccccCChHHHHHHHHhhhHHHHHHHHHHhhhhhhcCCeEEEEcCccccccCCCCccchHHH
Q 044010          122 HFGRLDHLVNNAGISSVALFEDIVNITDFKQIMNINFWGSVYTTRFAVPHLRYTKGKIVVLSSAASWLTAPRMSFYNASK  201 (248)
Q Consensus       122 ~~g~id~vv~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~g~iV~isS~~~~~~~~~~~~Y~~sK  201 (248)
                      ++|++|++|||||.....++.+ .+.++|++.+++|+.+++++++.+.|.|+ .+|+||++||..+..+.++..+|++||
T Consensus       102 ~~g~iD~lvnnAG~~~~~~~~~-~~~~~~~~~~~vN~~g~~~~~~~~~~~~~-~~g~iv~isS~~~~~~~~~~~~Y~asK  179 (267)
T 3u5t_A          102 AFGGVDVLVNNAGIMPLTTIAE-TGDAVFDRVIAVNLKGTFNTLREAAQRLR-VGGRIINMSTSQVGLLHPSYGIYAAAK  179 (267)
T ss_dssp             HHSCEEEEEECCCCCCCCCGGG-CCHHHHHHHHHHHHHHHHHHHHHHHHHEE-EEEEEEEECCTHHHHCCTTCHHHHHHH
T ss_pred             HcCCCCEEEECCCCCCCCChhh-CCHHHHHHHHHHHHHHHHHHHHHHHHHHh-hCCeEEEEeChhhccCCCCchHHHHHH
Confidence            9999999999999987666665 57899999999999999999999999996 468999999999999999999999999


Q ss_pred             HHHHHHHHHHHHHhCCC-eEEEEEecCccccCccccc
Q 044010          202 AALVLFFETLRVELGSD-VGVTIVTPGFIESELTQGK  237 (248)
Q Consensus       202 aal~~l~~~la~~~~~~-i~v~~v~pg~v~T~~~~~~  237 (248)
                      +|+++|+++++.|+++. ||||+|+||+++|+|....
T Consensus       180 aa~~~l~~~la~e~~~~gI~vn~v~PG~v~T~~~~~~  216 (267)
T 3u5t_A          180 AGVEAMTHVLSKELRGRDITVNAVAPGPTATDLFLEG  216 (267)
T ss_dssp             HHHHHHHHHHHHHTTTSCCEEEEEEECCBC-------
T ss_pred             HHHHHHHHHHHHHhhhhCCEEEEEEECCCcCcccccc
Confidence            99999999999999875 9999999999999997653

>3ksu_A 3-oxoacyl-acyl carrier protein reductase; structural genomics, PSI-2, dehydrogenase, protein structure initiative; 2.30A {Oenococcus oeni psu-1}

Probab=100.00  E-value=4.5e-40  Score=277.36  Aligned_cols=193  Identities=20%  Similarity=0.324  Sum_probs=168.9

Q ss_pred             ccCCCCCEEEEcCCCChHHHHHHHHHHHcCCeEEEEeCCc---chHHHHHHHHHhhCCCcEEEEEccCCCHHHHHHHHHH
Q 044010           42 SEDVSGKVVIITGASSGIGEHLAYEYARRGACLALCARRE---KSLEEVADTAREIGSPDVITIRADVSKVDDCRSLVEE  118 (248)
Q Consensus        42 ~~~~~~k~~lVtGg~~gIG~aia~~l~~~G~~V~l~~r~~---~~~~~~~~~l~~~~~~~v~~~~~D~~~~~~~~~~~~~  118 (248)
                      .++++||++|||||++|||+++|++|+++|++|++++|..   +++++..+++++.+ .++.++.+|++|.+++++++++
T Consensus         6 ~~~l~~k~vlVTGas~GIG~aia~~la~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~-~~~~~~~~Dv~d~~~v~~~~~~   84 (262)
T 3ksu_A            6 YHDLKNKVIVIAGGIKNLGALTAKTFALESVNLVLHYHQAKDSDTANKLKDELEDQG-AKVALYQSDLSNEEEVAKLFDF   84 (262)
T ss_dssp             CSCCTTCEEEEETCSSHHHHHHHHHHTTSSCEEEEEESCGGGHHHHHHHHHHHHTTT-CEEEEEECCCCSHHHHHHHHHH
T ss_pred             ccCCCCCEEEEECCCchHHHHHHHHHHHCCCEEEEEecCccCHHHHHHHHHHHHhcC-CcEEEEECCCCCHHHHHHHHHH
Confidence            3578999999999999999999999999999999987754   45666666776654 4899999999999999999999


Q ss_pred             HHhHcCCccEEEEccccCCcccccccCChHHHHHHHHhhhHHHHHHHHHHhhhhhhcCCeEEEEcCccccccCCCCccch
Q 044010          119 TMNHFGRLDHLVNNAGISSVALFEDIVNITDFKQIMNINFWGSVYTTRFAVPHLRYTKGKIVVLSSAASWLTAPRMSFYN  198 (248)
Q Consensus       119 ~~~~~g~id~vv~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~g~iV~isS~~~~~~~~~~~~Y~  198 (248)
                      +.+++|++|++|||||.....++.+ .+.++|++.+++|+.+++.+++++.|.|+ ++|+||++||..+..+.++..+|+
T Consensus        85 ~~~~~g~iD~lvnnAg~~~~~~~~~-~~~~~~~~~~~~N~~g~~~l~~~~~~~m~-~~g~iv~isS~~~~~~~~~~~~Y~  162 (262)
T 3ksu_A           85 AEKEFGKVDIAINTVGKVLKKPIVE-TSEAEFDAMDTINNKVAYFFIKQAAKHMN-PNGHIITIATSLLAAYTGFYSTYA  162 (262)
T ss_dssp             HHHHHCSEEEEEECCCCCCSSCGGG-CCHHHHHHHHHHHHHHHHHHHHHHHTTEE-EEEEEEEECCCHHHHHHCCCCC--
T ss_pred             HHHHcCCCCEEEECCCCCCCCCccc-CCHHHHHHHHHHHhHHHHHHHHHHHHhhc-CCCEEEEEechhhccCCCCCchhH
Confidence            9999999999999999887766665 57899999999999999999999999994 568999999999998888999999


Q ss_pred             HHHHHHHHHHHHHHHHhCCC-eEEEEEecCccccCccccc
Q 044010          199 ASKAALVLFFETLRVELGSD-VGVTIVTPGFIESELTQGK  237 (248)
Q Consensus       199 ~sKaal~~l~~~la~~~~~~-i~v~~v~pg~v~T~~~~~~  237 (248)
                      +||+|+++|+++++.|+++. ||||+|+||+|+|+|....
T Consensus       163 asKaa~~~l~~~la~e~~~~gi~vn~v~PG~v~T~~~~~~  202 (262)
T 3ksu_A          163 GNKAPVEHYTRAASKELMKQQISVNAIAPGPMDTSFFYGQ  202 (262)
T ss_dssp             ---CHHHHHHHHHHHHTTTTTCEEEEEEECCCCTHHHHTC
T ss_pred             HHHHHHHHHHHHHHHHHHHcCcEEEEEeeCCCcCcccccc
Confidence            99999999999999999875 9999999999999997654

>3o38_A Short chain dehydrogenase; tuberculosis, ortholog from A non-pathogenic dehydrogenase, structural genomics; 1.95A {Mycobacterium smegmatis}

Probab=100.00  E-value=6.5e-39  Score=270.36  Aligned_cols=196  Identities=27%  Similarity=0.388  Sum_probs=174.7

Q ss_pred             cCCCCCEEEEcCCC-ChHHHHHHHHHHHcCCeEEEEeCCcchHHHHHHHHHhhCCCcEEEEEccCCCHHHHHHHHHHHHh
Q 044010           43 EDVSGKVVIITGAS-SGIGEHLAYEYARRGACLALCARREKSLEEVADTAREIGSPDVITIRADVSKVDDCRSLVEETMN  121 (248)
Q Consensus        43 ~~~~~k~~lVtGg~-~gIG~aia~~l~~~G~~V~l~~r~~~~~~~~~~~l~~~~~~~v~~~~~D~~~~~~~~~~~~~~~~  121 (248)
                      .++++|++|||||+ +|||+++|++|+++|++|++++|+.++.++..+++++.++.++.++.+|++|.++++++++++.+
T Consensus        18 ~~l~~k~vlITGasg~GIG~~~a~~l~~~G~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~Dl~~~~~v~~~~~~~~~   97 (266)
T 3o38_A           18 GLLKGKVVLVTAAAGTGIGSTTARRALLEGADVVISDYHERRLGETRDQLADLGLGRVEAVVCDVTSTEAVDALITQTVE   97 (266)
T ss_dssp             STTTTCEEEESSCSSSSHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHTTCSSCEEEEECCTTCHHHHHHHHHHHHH
T ss_pred             cCCCCCEEEEECCCCCchHHHHHHHHHHCCCEEEEecCCHHHHHHHHHHHHhcCCCceEEEEeCCCCHHHHHHHHHHHHH
Confidence            36899999999998 59999999999999999999999999999998888877766899999999999999999999999


Q ss_pred             HcCCccEEEEccccCCcccccccCChHHHHHHHHhhhHHHHHHHHHHhhhhhhc--CCeEEEEcCccccccCCCCccchH
Q 044010          122 HFGRLDHLVNNAGISSVALFEDIVNITDFKQIMNINFWGSVYTTRFAVPHLRYT--KGKIVVLSSAASWLTAPRMSFYNA  199 (248)
Q Consensus       122 ~~g~id~vv~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~--~g~iV~isS~~~~~~~~~~~~Y~~  199 (248)
                      ++|++|++|||||.....++.+ .+.++|++.+++|+.+++.+++.+.|.|.+.  +++||++||..+..+.++...|++
T Consensus        98 ~~g~id~li~~Ag~~~~~~~~~-~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~iv~~sS~~~~~~~~~~~~Y~~  176 (266)
T 3o38_A           98 KAGRLDVLVNNAGLGGQTPVVD-MTDEEWDRVLNVTLTSVMRATRAALRYFRGVDHGGVIVNNASVLGWRAQHSQSHYAA  176 (266)
T ss_dssp             HHSCCCEEEECCCCCCCCCGGG-CCHHHHHHHHHHHTHHHHHHHHHHHHHHHTSSCCEEEEEECCGGGTCCCTTCHHHHH
T ss_pred             HhCCCcEEEECCCcCCCCCccc-CCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcCCCeEEEEeCCHHHcCCCCCCchHHH
Confidence            9999999999999887766655 5789999999999999999999999998754  479999999999999999999999


Q ss_pred             HHHHHHHHHHHHHHHhCC-CeEEEEEecCccccCccccccc
Q 044010          200 SKAALVLFFETLRVELGS-DVGVTIVTPGFIESELTQGKFL  239 (248)
Q Consensus       200 sKaal~~l~~~la~~~~~-~i~v~~v~pg~v~T~~~~~~~~  239 (248)
                      ||+|+++++++++.|+++ +|+||+|+||+++|++.+....
T Consensus       177 sKaa~~~~~~~la~e~~~~gi~v~~v~PG~v~t~~~~~~~~  217 (266)
T 3o38_A          177 AKAGVMALTRCSAIEAVEFGVRINAVSPSIARHKFLEKTSS  217 (266)
T ss_dssp             HHHHHHHHHHHHHHHHGGGTEEEEEEEECCCCC--------
T ss_pred             HHHHHHHHHHHHHHHHHHcCcEEEEEeCCcccchhhhccCc
Confidence            999999999999999987 4999999999999999876543

>3ijr_A Oxidoreductase, short chain dehydrogenase/reducta; structural genomics, infectious D center for structural genomics of infectious diseases; HET: NAD; 2.05A {Bacillus anthracis str} PDB: 3i3o_A*

Probab=100.00  E-value=2.5e-39  Score=276.84  Aligned_cols=194  Identities=27%  Similarity=0.416  Sum_probs=171.2

Q ss_pred             cCCCCCEEEEcCCCChHHHHHHHHHHHcCCeEEEEeCCcchHHH-HHHHHHhhCCCcEEEEEccCCCHHHHHHHHHHHHh
Q 044010           43 EDVSGKVVIITGASSGIGEHLAYEYARRGACLALCARREKSLEE-VADTAREIGSPDVITIRADVSKVDDCRSLVEETMN  121 (248)
Q Consensus        43 ~~~~~k~~lVtGg~~gIG~aia~~l~~~G~~V~l~~r~~~~~~~-~~~~l~~~~~~~v~~~~~D~~~~~~~~~~~~~~~~  121 (248)
                      .+++||++|||||++|||+++|++|+++|++|++++|+.++..+ ..+.+++.+ .++.++.+|++|+++++++++++.+
T Consensus        43 ~~l~gk~vlVTGas~GIG~aia~~la~~G~~V~~~~r~~~~~~~~~~~~~~~~~-~~~~~~~~Dv~d~~~v~~~~~~~~~  121 (291)
T 3ijr_A           43 EKLKGKNVLITGGDSGIGRAVSIAFAKEGANIAIAYLDEEGDANETKQYVEKEG-VKCVLLPGDLSDEQHCKDIVQETVR  121 (291)
T ss_dssp             STTTTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESSCHHHHHHHHHHHHTTT-CCEEEEESCTTSHHHHHHHHHHHHH
T ss_pred             cCCCCCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEeCCchHHHHHHHHHHHhcC-CcEEEEECCCCCHHHHHHHHHHHHH
Confidence            46799999999999999999999999999999999998765443 444444443 4899999999999999999999999


Q ss_pred             HcCCccEEEEccccCCcccccccCChHHHHHHHHhhhHHHHHHHHHHhhhhhhcCCeEEEEcCccccccCCCCccchHHH
Q 044010          122 HFGRLDHLVNNAGISSVALFEDIVNITDFKQIMNINFWGSVYTTRFAVPHLRYTKGKIVVLSSAASWLTAPRMSFYNASK  201 (248)
Q Consensus       122 ~~g~id~vv~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~g~iV~isS~~~~~~~~~~~~Y~~sK  201 (248)
                      ++|++|++|||||...+....++.+.++|++.+++|+.+++++++++.|.|+ ++|+||++||..+..+.++..+|++||
T Consensus       122 ~~g~iD~lvnnAg~~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~~~-~~g~iv~isS~~~~~~~~~~~~Y~asK  200 (291)
T 3ijr_A          122 QLGSLNILVNNVAQQYPQQGLEYITAEQLEKTFRINIFSYFHVTKAALSHLK-QGDVIINTASIVAYEGNETLIDYSATK  200 (291)
T ss_dssp             HHSSCCEEEECCCCCCCCSSGGGCCHHHHHHHHHHHTHHHHHHHHHHHTTCC-TTCEEEEECCTHHHHCCTTCHHHHHHH
T ss_pred             HcCCCCEEEECCCCcCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHh-hCCEEEEEechHhcCCCCCChhHHHHH
Confidence            9999999999999875443333357899999999999999999999999996 468999999999999999999999999


Q ss_pred             HHHHHHHHHHHHHhCC-CeEEEEEecCccccCcccccc
Q 044010          202 AALVLFFETLRVELGS-DVGVTIVTPGFIESELTQGKF  238 (248)
Q Consensus       202 aal~~l~~~la~~~~~-~i~v~~v~pg~v~T~~~~~~~  238 (248)
                      +|+++|+++++.|+++ +||||+|+||+|+|++.....
T Consensus       201 aa~~~l~~~la~e~~~~gi~vn~v~PG~v~T~~~~~~~  238 (291)
T 3ijr_A          201 GAIVAFTRSLSQSLVQKGIRVNGVAPGPIWTPLIPSSF  238 (291)
T ss_dssp             HHHHHHHHHHHHHHGGGTCEEEEEEECSBCSTHHHHHS
T ss_pred             HHHHHHHHHHHHHHhhcCEEEEEEeeCCCcCCcccccC
Confidence            9999999999999987 499999999999999975543

>3tjr_A Short chain dehydrogenase; structural genomics, seattle structural genomics center for infectious disease, ssgcid, SCD, NAD; HET: UNL; 1.60A {Mycobacterium avium subsp}

Probab=100.00  E-value=4.3e-39  Score=276.57  Aligned_cols=192  Identities=29%  Similarity=0.494  Sum_probs=178.0

Q ss_pred             CCCCCEEEEcCCCChHHHHHHHHHHHcCCeEEEEeCCcchHHHHHHHHHhhCCCcEEEEEccCCCHHHHHHHHHHHHhHc
Q 044010           44 DVSGKVVIITGASSGIGEHLAYEYARRGACLALCARREKSLEEVADTAREIGSPDVITIRADVSKVDDCRSLVEETMNHF  123 (248)
Q Consensus        44 ~~~~k~~lVtGg~~gIG~aia~~l~~~G~~V~l~~r~~~~~~~~~~~l~~~~~~~v~~~~~D~~~~~~~~~~~~~~~~~~  123 (248)
                      +++||++|||||++|||+++|++|+++|++|++++|+.+++++..+++++.+. ++.++.+|++|.++++++++++.+++
T Consensus        28 ~l~gk~vlVTGas~gIG~~la~~l~~~G~~V~~~~r~~~~~~~~~~~l~~~~~-~~~~~~~Dv~d~~~v~~~~~~~~~~~  106 (301)
T 3tjr_A           28 GFDGRAAVVTGGASGIGLATATEFARRGARLVLSDVDQPALEQAVNGLRGQGF-DAHGVVCDVRHLDEMVRLADEAFRLL  106 (301)
T ss_dssp             CSTTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHTTC-CEEEEECCTTCHHHHHHHHHHHHHHH
T ss_pred             ccCCCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHhcCC-ceEEEEccCCCHHHHHHHHHHHHHhC
Confidence            58899999999999999999999999999999999999999998888877654 78999999999999999999999999


Q ss_pred             CCccEEEEccccCCcccccccCChHHHHHHHHhhhHHHHHHHHHHhhhhhhc--CCeEEEEcCccccccCCCCccchHHH
Q 044010          124 GRLDHLVNNAGISSVALFEDIVNITDFKQIMNINFWGSVYTTRFAVPHLRYT--KGKIVVLSSAASWLTAPRMSFYNASK  201 (248)
Q Consensus       124 g~id~vv~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~--~g~iV~isS~~~~~~~~~~~~Y~~sK  201 (248)
                      |++|++|||||.....++.+ .+.++|++.+++|+.|++++++.++|.|.++  +|+||++||.++..+.++...|++||
T Consensus       107 g~id~lvnnAg~~~~~~~~~-~~~~~~~~~~~vN~~g~~~l~~~~~~~~~~~~~~g~iv~isS~~~~~~~~~~~~Y~asK  185 (301)
T 3tjr_A          107 GGVDVVFSNAGIVVAGPLAQ-MNHDDWRWVIDIDLWGSIHAVEAFLPRLLEQGTGGHIAFTASFAGLVPNAGLGTYGVAK  185 (301)
T ss_dssp             SSCSEEEECCCCCCCBCGGG-CCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHCSCEEEEEECCGGGTSCCTTBHHHHHHH
T ss_pred             CCCCEEEECCCcCCCCCccc-CCHHHHHHHHHhhhHHHHHHHHHHHHHHHhcCCCcEEEEeCchhhcCCCCCchHHHHHH
Confidence            99999999999987766655 5789999999999999999999999998754  48999999999999999999999999


Q ss_pred             HHHHHHHHHHHHHhCC-CeEEEEEecCccccCccccc
Q 044010          202 AALVLFFETLRVELGS-DVGVTIVTPGFIESELTQGK  237 (248)
Q Consensus       202 aal~~l~~~la~~~~~-~i~v~~v~pg~v~T~~~~~~  237 (248)
                      +|+++++++++.|+++ +|+|++|+||+|+|+|....
T Consensus       186 aa~~~~~~~la~e~~~~gi~v~~v~PG~v~T~~~~~~  222 (301)
T 3tjr_A          186 YGVVGLAETLAREVKPNGIGVSVLCPMVVETKLVSNS  222 (301)
T ss_dssp             HHHHHHHHHHHHHHGGGTEEEEEECCSCCCSSHHHHH
T ss_pred             HHHHHHHHHHHHHhcccCcEEEEEECCcccccccccc
Confidence            9999999999999987 49999999999999998754

>3grp_A 3-oxoacyl-(acyl carrierprotein) reductase; structural genomics, oxidoreductase, S structural genomics center for infectious disease, ssgcid; 2.09A {Bartonella henselae} PDB: 3enn_A 3emk_A

Probab=100.00  E-value=1.6e-39  Score=274.65  Aligned_cols=190  Identities=31%  Similarity=0.486  Sum_probs=162.9

Q ss_pred             cCCCCCEEEEcCCCChHHHHHHHHHHHcCCeEEEEeCCcchHHHHHHHHHhhCCCcEEEEEccCCCHHHHHHHHHHHHhH
Q 044010           43 EDVSGKVVIITGASSGIGEHLAYEYARRGACLALCARREKSLEEVADTAREIGSPDVITIRADVSKVDDCRSLVEETMNH  122 (248)
Q Consensus        43 ~~~~~k~~lVtGg~~gIG~aia~~l~~~G~~V~l~~r~~~~~~~~~~~l~~~~~~~v~~~~~D~~~~~~~~~~~~~~~~~  122 (248)
                      .+++||++|||||++|||+++|++|+++|++|++.+|+.+++++..+++   + .++.++.+|++|+++++++++++.++
T Consensus        23 ~~l~gk~vlVTGas~gIG~aia~~la~~G~~V~~~~r~~~~~~~~~~~~---~-~~~~~~~~Dv~d~~~v~~~~~~~~~~   98 (266)
T 3grp_A           23 FKLTGRKALVTGATGGIGEAIARCFHAQGAIVGLHGTREDKLKEIAADL---G-KDVFVFSANLSDRKSIKQLAEVAERE   98 (266)
T ss_dssp             TCCTTCEEEESSTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHH---C-SSEEEEECCTTSHHHHHHHHHHHHHH
T ss_pred             hccCCCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHh---C-CceEEEEeecCCHHHHHHHHHHHHHH
Confidence            4789999999999999999999999999999999999987777665544   3 37899999999999999999999999


Q ss_pred             cCCccEEEEccccCCcccccccCChHHHHHHHHhhhHHHHHHHHHHhhhhhhc-CCeEEEEcCccccccCCCCccchHHH
Q 044010          123 FGRLDHLVNNAGISSVALFEDIVNITDFKQIMNINFWGSVYTTRFAVPHLRYT-KGKIVVLSSAASWLTAPRMSFYNASK  201 (248)
Q Consensus       123 ~g~id~vv~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~-~g~iV~isS~~~~~~~~~~~~Y~~sK  201 (248)
                      +|++|++|||||.....++.+ .+.++|++.+++|+.+++.++++++|.|.++ .|+||++||..+..+.++..+|++||
T Consensus        99 ~g~iD~lvnnAg~~~~~~~~~-~~~~~~~~~~~vN~~g~~~l~~~~~~~~~~~~~g~Iv~isS~~~~~~~~~~~~Y~asK  177 (266)
T 3grp_A           99 MEGIDILVNNAGITRDGLFVR-MQDQDWDDVLAVNLTAASTLTRELIHSMMRRRYGRIINITSIVGVVGNPGQTNYCAAK  177 (266)
T ss_dssp             HTSCCEEEECCCCC-----CC-CHHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEEECCC-------CHHHHHHHH
T ss_pred             cCCCCEEEECCCCCCCCCccc-CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCcEEEEECCHHHcCCCCCchhHHHHH
Confidence            999999999999887665555 4679999999999999999999999998754 48999999999999999999999999


Q ss_pred             HHHHHHHHHHHHHhCC-CeEEEEEecCccccCccccc
Q 044010          202 AALVLFFETLRVELGS-DVGVTIVTPGFIESELTQGK  237 (248)
Q Consensus       202 aal~~l~~~la~~~~~-~i~v~~v~pg~v~T~~~~~~  237 (248)
                      +|+++++++++.|+++ +||||+|+||+++|+|.+..
T Consensus       178 aa~~~~~~~la~e~~~~gI~vn~v~PG~v~t~~~~~~  214 (266)
T 3grp_A          178 AGLIGFSKALAQEIASRNITVNCIAPGFIKSAMTDKL  214 (266)
T ss_dssp             HHHHHHHHHHHHHHGGGTEEEEEEEECSBCSHHHHTC
T ss_pred             HHHHHHHHHHHHHhhhhCcEEEEEeeCcCCCchhhcc
Confidence            9999999999999987 49999999999999987654

>1vl8_A Gluconate 5-dehydrogenase; TM0441, structural genomics, JCSG structure initiative, PSI, joint center for structural GENO oxidoreductase; HET: NAP; 2.07A {Thermotoga maritima} SCOP: c.2.1.2

Probab=100.00  E-value=6.6e-39  Score=270.96  Aligned_cols=199  Identities=28%  Similarity=0.486  Sum_probs=174.8

Q ss_pred             hhccccCCCCCEEEEcCCCChHHHHHHHHHHHcCCeEEEEeCCcchHHHHHHHHHhhCCCcEEEEEccCCCHHHHHHHHH
Q 044010           38 NSIFSEDVSGKVVIITGASSGIGEHLAYEYARRGACLALCARREKSLEEVADTAREIGSPDVITIRADVSKVDDCRSLVE  117 (248)
Q Consensus        38 ~~~~~~~~~~k~~lVtGg~~gIG~aia~~l~~~G~~V~l~~r~~~~~~~~~~~l~~~~~~~v~~~~~D~~~~~~~~~~~~  117 (248)
                      ......++++|++|||||++|||++++++|+++|++|++++|+.++.++..+++.+..+.++.++.+|++|.++++++++
T Consensus        12 ~~~~~~~l~~k~~lVTGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~Dl~~~~~v~~~~~   91 (267)
T 1vl8_A           12 HMKEVFDLRGRVALVTGGSRGLGFGIAQGLAEAGCSVVVASRNLEEASEAAQKLTEKYGVETMAFRCDVSNYEEVKKLLE   91 (267)
T ss_dssp             -----CCCTTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHHHCCCEEEEECCTTCHHHHHHHHH
T ss_pred             CCCCCcCCCCCEEEEECCCCHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHHhcCCeEEEEEcCCCCHHHHHHHHH
Confidence            34445688999999999999999999999999999999999998888877777733223478899999999999999999


Q ss_pred             HHHhHcCCccEEEEccccCCcccccccCChHHHHHHHHhhhHHHHHHHHHHhhhhhhc-CCeEEEEcCcc-ccccCCCCc
Q 044010          118 ETMNHFGRLDHLVNNAGISSVALFEDIVNITDFKQIMNINFWGSVYTTRFAVPHLRYT-KGKIVVLSSAA-SWLTAPRMS  195 (248)
Q Consensus       118 ~~~~~~g~id~vv~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~-~g~iV~isS~~-~~~~~~~~~  195 (248)
                      ++.+++|++|++|||||.....++.+ .+.++|++.+++|+.++++++++++|.|+++ .|+||++||.. +..+.++..
T Consensus        92 ~~~~~~g~iD~lvnnAg~~~~~~~~~-~~~~~~~~~~~~N~~g~~~l~~~~~~~m~~~~~g~iv~isS~~~~~~~~~~~~  170 (267)
T 1vl8_A           92 AVKEKFGKLDTVVNAAGINRRHPAEE-FPLDEFRQVIEVNLFGTYYVCREAFSLLRESDNPSIINIGSLTVEEVTMPNIS  170 (267)
T ss_dssp             HHHHHHSCCCEEEECCCCCCCCCGGG-CCHHHHHHHHHHHTHHHHHHHHHHHHHHTTCSSCEEEEECCGGGTCCCSSSCH
T ss_pred             HHHHHcCCCCEEEECCCcCCCCChhh-CCHHHHHHHHHHhhHHHHHHHHHHHHHHHHcCCcEEEEECCcchhccCCCCCh
Confidence            99999999999999999876655555 5789999999999999999999999999755 48999999998 888888899


Q ss_pred             cchHHHHHHHHHHHHHHHHhCC-CeEEEEEecCccccCccccc
Q 044010          196 FYNASKAALVLFFETLRVELGS-DVGVTIVTPGFIESELTQGK  237 (248)
Q Consensus       196 ~Y~~sKaal~~l~~~la~~~~~-~i~v~~v~pg~v~T~~~~~~  237 (248)
                      .|++||+++++++++++.|+++ +|+||+|+||+++|+|....
T Consensus       171 ~Y~asK~a~~~~~~~la~e~~~~gi~v~~v~PG~v~T~~~~~~  213 (267)
T 1vl8_A          171 AYAASKGGVASLTKALAKEWGRYGIRVNVIAPGWYRTKMTEAV  213 (267)
T ss_dssp             HHHHHHHHHHHHHHHHHHHHGGGTCEEEEEEECCBCSTTTHHH
T ss_pred             hHHHHHHHHHHHHHHHHHHhcccCeEEEEEEeccCcccccccc
Confidence            9999999999999999999987 59999999999999997653

>2uvd_A 3-oxoacyl-(acyl-carrier-protein) reductase; beta-ketoacyl- (acyl carrier protein) reductase, short-chain dehydrogenase/reductase (SDR); 2.4A {Bacillus anthracis}

Probab=100.00  E-value=5.4e-39  Score=268.09  Aligned_cols=191  Identities=32%  Similarity=0.544  Sum_probs=173.6

Q ss_pred             CCCCCEEEEcCCCChHHHHHHHHHHHcCCeEEEEeC-CcchHHHHHHHHHhhCCCcEEEEEccCCCHHHHHHHHHHHHhH
Q 044010           44 DVSGKVVIITGASSGIGEHLAYEYARRGACLALCAR-REKSLEEVADTAREIGSPDVITIRADVSKVDDCRSLVEETMNH  122 (248)
Q Consensus        44 ~~~~k~~lVtGg~~gIG~aia~~l~~~G~~V~l~~r-~~~~~~~~~~~l~~~~~~~v~~~~~D~~~~~~~~~~~~~~~~~  122 (248)
                      ++++|+++||||++|||++++++|+++|++|++++| +.++.++..+++++.+. ++.++.+|++|.++++++++++.++
T Consensus         1 ~l~~k~vlVTGas~giG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~-~~~~~~~D~~~~~~~~~~~~~~~~~   79 (246)
T 2uvd_A            1 MLKGKVALVTGASRGIGRAIAIDLAKQGANVVVNYAGNEQKANEVVDEIKKLGS-DAIAVRADVANAEDVTNMVKQTVDV   79 (246)
T ss_dssp             CCTTCEEEETTCSSHHHHHHHHHHHHTTCEEEEEESSCHHHHHHHHHHHHHTTC-CEEEEECCTTCHHHHHHHHHHHHHH
T ss_pred             CCCCCEEEEECCCcHHHHHHHHHHHHCCCEEEEEeCCCHHHHHHHHHHHHhcCC-cEEEEEcCCCCHHHHHHHHHHHHHH
Confidence            468999999999999999999999999999999999 77777777777766543 7889999999999999999999999


Q ss_pred             cCCccEEEEccccCCcccccccCChHHHHHHHHhhhHHHHHHHHHHhhhhhhc-CCeEEEEcCccccccCCCCccchHHH
Q 044010          123 FGRLDHLVNNAGISSVALFEDIVNITDFKQIMNINFWGSVYTTRFAVPHLRYT-KGKIVVLSSAASWLTAPRMSFYNASK  201 (248)
Q Consensus       123 ~g~id~vv~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~-~g~iV~isS~~~~~~~~~~~~Y~~sK  201 (248)
                      +|++|++|||||.....++.+ .+.++|++.+++|+.+++.+++.+.|.|+++ .|+||++||..+..+.++...|++||
T Consensus        80 ~g~id~lv~nAg~~~~~~~~~-~~~~~~~~~~~~N~~g~~~~~~~~~~~~~~~~~g~iv~isS~~~~~~~~~~~~Y~asK  158 (246)
T 2uvd_A           80 FGQVDILVNNAGVTKDNLLMR-MKEEEWDTVINTNLKGVFLCTKAVSRFMMRQRHGRIVNIASVVGVTGNPGQANYVAAK  158 (246)
T ss_dssp             HSCCCEEEECCCCCCCBCGGG-CCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEEECCTHHHHCCTTBHHHHHHH
T ss_pred             cCCCCEEEECCCCCCCCChhh-CCHHHHHHHHHHHhHHHHHHHHHHHHHHHHcCCcEEEEECCHHhcCCCCCCchHHHHH
Confidence            999999999999876655555 5789999999999999999999999999754 48999999999988888999999999


Q ss_pred             HHHHHHHHHHHHHhCC-CeEEEEEecCccccCcccc
Q 044010          202 AALVLFFETLRVELGS-DVGVTIVTPGFIESELTQG  236 (248)
Q Consensus       202 aal~~l~~~la~~~~~-~i~v~~v~pg~v~T~~~~~  236 (248)
                      +++++++++++.|+++ +|+||+|+||+++|++...
T Consensus       159 ~a~~~~~~~la~e~~~~gi~v~~v~Pg~v~t~~~~~  194 (246)
T 2uvd_A          159 AGVIGLTKTSAKELASRNITVNAIAPGFIATDMTDV  194 (246)
T ss_dssp             HHHHHHHHHHHHHHGGGTEEEEEEEECSBGGGCSSC
T ss_pred             HHHHHHHHHHHHHhhhcCeEEEEEEeccccCcchhh
Confidence            9999999999999987 5999999999999998764

>1x1t_A D(-)-3-hydroxybutyrate dehydrogenase; NAD, NADH, SDR, short chain dehydrogenase, ketone BODY, beta hydroxybutyrate, oxidoreductase; HET: NAD; 1.52A {Pseudomonas fragi} SCOP: c.2.1.2 PDB: 1wmb_A* 2ztl_A* 2ztv_A* 2ztm_A* 2ztu_A* 2yz7_A 2zea_A* 3eew_A* 3vdq_A* 3vdr_A*

Probab=100.00  E-value=6.5e-39  Score=269.72  Aligned_cols=192  Identities=30%  Similarity=0.472  Sum_probs=169.6

Q ss_pred             CCCCEEEEcCCCChHHHHHHHHHHHcCCeEEEEeCCcch-HHHHHHHHHhhCCCcEEEEEccCCCHHHHHHHHHHHHhHc
Q 044010           45 VSGKVVIITGASSGIGEHLAYEYARRGACLALCARREKS-LEEVADTAREIGSPDVITIRADVSKVDDCRSLVEETMNHF  123 (248)
Q Consensus        45 ~~~k~~lVtGg~~gIG~aia~~l~~~G~~V~l~~r~~~~-~~~~~~~l~~~~~~~v~~~~~D~~~~~~~~~~~~~~~~~~  123 (248)
                      +++|++|||||++|||++++++|+++|++|++++|+.++ .++..+++++..+.++.++.+|++|.++++++++++.+++
T Consensus         2 l~~k~vlVTGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~v~~~~~~~~~~~   81 (260)
T 1x1t_A            2 LKGKVAVVTGSTSGIGLGIATALAAQGADIVLNGFGDAAEIEKVRAGLAAQHGVKVLYDGADLSKGEAVRGLVDNAVRQM   81 (260)
T ss_dssp             CTTCEEEETTCSSHHHHHHHHHHHHTTCEEEEECCSCHHHHHHHHHHHHHHHTSCEEEECCCTTSHHHHHHHHHHHHHHH
T ss_pred             CCCCEEEEeCCCcHHHHHHHHHHHHcCCEEEEEeCCcchHHHHHHHHHHhccCCcEEEEECCCCCHHHHHHHHHHHHHhc
Confidence            679999999999999999999999999999999999877 7777777766523478899999999999999999999999


Q ss_pred             CCccEEEEccccCCcccccccCChHHHHHHHHhhhHHHHHHHHHHhhhhhhc-CCeEEEEcCccccccCCCCccchHHHH
Q 044010          124 GRLDHLVNNAGISSVALFEDIVNITDFKQIMNINFWGSVYTTRFAVPHLRYT-KGKIVVLSSAASWLTAPRMSFYNASKA  202 (248)
Q Consensus       124 g~id~vv~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~-~g~iV~isS~~~~~~~~~~~~Y~~sKa  202 (248)
                      |++|++|||||.....++.+ .+.++|++.+++|+.+++++++.+.|.|+++ .|+||++||..+..+.++..+|++||+
T Consensus        82 g~iD~lv~~Ag~~~~~~~~~-~~~~~~~~~~~~N~~g~~~~~~~~~~~~~~~~~g~iv~isS~~~~~~~~~~~~Y~~sK~  160 (260)
T 1x1t_A           82 GRIDILVNNAGIQHTALIED-FPTEKWDAILALNLSAVFHGTAAALPHMKKQGFGRIINIASAHGLVASANKSAYVAAKH  160 (260)
T ss_dssp             SCCSEEEECCCCCCCCCGGG-CCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEEECCGGGTSCCTTCHHHHHHHH
T ss_pred             CCCCEEEECCCCCCCCChhh-CCHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCEEEEECcHHhCcCCCCCchHHHHHH
Confidence            99999999999876655555 5789999999999999999999999999754 489999999999998899999999999


Q ss_pred             HHHHHHHHHHHHhCCC-eEEEEEecCccccCccccc
Q 044010          203 ALVLFFETLRVELGSD-VGVTIVTPGFIESELTQGK  237 (248)
Q Consensus       203 al~~l~~~la~~~~~~-i~v~~v~pg~v~T~~~~~~  237 (248)
                      ++++++++++.|+++. ||||+|+||+++|++.+..
T Consensus       161 a~~~~~~~la~e~~~~gi~v~~v~Pg~v~t~~~~~~  196 (260)
T 1x1t_A          161 GVVGFTKVTALETAGQGITANAICPGWVRTPLVEKQ  196 (260)
T ss_dssp             HHHHHHHHHHHHHTTTTEEEEEEEECCBCC------
T ss_pred             HHHHHHHHHHHHhccCCEEEEEEeecCccCchHHHh
Confidence            9999999999999874 9999999999999997654

>3t4x_A Oxidoreductase, short chain dehydrogenase/reducta; structural genomics, center for structural genomics of infec diseases, csgid; 2.80A {Bacillus anthracis}

Probab=100.00  E-value=6.5e-39  Score=270.86  Aligned_cols=192  Identities=23%  Similarity=0.394  Sum_probs=173.6

Q ss_pred             cccCCCCCEEEEcCCCChHHHHHHHHHHHcCCeEEEEeCCcchHHHHHHHHHhhC-CCcEEEEEccCCCHHHHHHHHHHH
Q 044010           41 FSEDVSGKVVIITGASSGIGEHLAYEYARRGACLALCARREKSLEEVADTAREIG-SPDVITIRADVSKVDDCRSLVEET  119 (248)
Q Consensus        41 ~~~~~~~k~~lVtGg~~gIG~aia~~l~~~G~~V~l~~r~~~~~~~~~~~l~~~~-~~~v~~~~~D~~~~~~~~~~~~~~  119 (248)
                      +.++++||++|||||++|||+++|++|+++|++|++++|+.++.++..+++.+.+ +..+..+.+|+++.++++++++  
T Consensus         4 m~~~l~~k~~lVTGas~gIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~D~~~~~~~~~~~~--   81 (267)
T 3t4x_A            4 MHMQLKGKTALVTGSTAGIGKAIATSLVAEGANVLINGRREENVNETIKEIRAQYPDAILQPVVADLGTEQGCQDVIE--   81 (267)
T ss_dssp             CCCCCTTCEEEETTCSSHHHHHHHHHHHHTTCEEEEEESSHHHHHHHHHHHHHHCTTCEEEEEECCTTSHHHHHHHHH--
T ss_pred             cccccCCCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhhCCCceEEEEecCCCCHHHHHHHHH--
Confidence            4568899999999999999999999999999999999999999888888887765 3467889999999998877664  


Q ss_pred             HhHcCCccEEEEccccCCcccccccCChHHHHHHHHhhhHHHHHHHHHHhhhhhhcC-CeEEEEcCccccccCCCCccch
Q 044010          120 MNHFGRLDHLVNNAGISSVALFEDIVNITDFKQIMNINFWGSVYTTRFAVPHLRYTK-GKIVVLSSAASWLTAPRMSFYN  198 (248)
Q Consensus       120 ~~~~g~id~vv~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~-g~iV~isS~~~~~~~~~~~~Y~  198 (248)
                        ++|++|++|||||...+.++.+ .+.++|++.+++|+.+++.++++++|.|.+++ |+||++||..+..+.++..+|+
T Consensus        82 --~~g~id~lv~nAg~~~~~~~~~-~~~~~~~~~~~vN~~g~~~~~~~~~~~~~~~~~g~iv~isS~~~~~~~~~~~~Y~  158 (267)
T 3t4x_A           82 --KYPKVDILINNLGIFEPVEYFD-IPDEDWFKLFEVNIMSGVRLTRSYLKKMIERKEGRVIFIASEAAIMPSQEMAHYS  158 (267)
T ss_dssp             --HCCCCSEEEECCCCCCCCCGGG-SCHHHHHHHHHHHTHHHHHHHHHHHHHHHHTTEEEEEEECCGGGTSCCTTCHHHH
T ss_pred             --hcCCCCEEEECCCCCCCCcccc-CCHHHHHHHHHHHhHHHHHHHHHHHHHHHhCCCCEEEEEcchhhccCCCcchHHH
Confidence              5789999999999887766665 57899999999999999999999999997654 8999999999999999999999


Q ss_pred             HHHHHHHHHHHHHHHHhCCC-eEEEEEecCccccCccccc
Q 044010          199 ASKAALVLFFETLRVELGSD-VGVTIVTPGFIESELTQGK  237 (248)
Q Consensus       199 ~sKaal~~l~~~la~~~~~~-i~v~~v~pg~v~T~~~~~~  237 (248)
                      +||+|+++|+++++.|+++. ||||+|+||+++|++....
T Consensus       159 asKaa~~~l~~~la~e~~~~gi~vn~v~PG~v~t~~~~~~  198 (267)
T 3t4x_A          159 ATKTMQLSLSRSLAELTTGTNVTVNTIMPGSTLTEGVETM  198 (267)
T ss_dssp             HHHHHHHHHHHHHHHHTTTSEEEEEEEEECCBCCHHHHHH
T ss_pred             HHHHHHHHHHHHHHHHhCCCCeEEEEEeCCeecCccHHHH
Confidence            99999999999999999885 9999999999999986644

>1zem_A Xylitol dehydrogenase; rossmann fold, dinucleotide-binding domain, oxidoreductase; HET: NAD; 1.90A {Gluconobacter oxydans} SCOP: c.2.1.2

Probab=100.00  E-value=3.6e-39  Score=271.62  Aligned_cols=192  Identities=28%  Similarity=0.455  Sum_probs=174.7

Q ss_pred             cCCCCCEEEEcCCCChHHHHHHHHHHHcCCeEEEEeCCcchHHHHHHHHHhhCCCcEEEEEccCCCHHHHHHHHHHHHhH
Q 044010           43 EDVSGKVVIITGASSGIGEHLAYEYARRGACLALCARREKSLEEVADTAREIGSPDVITIRADVSKVDDCRSLVEETMNH  122 (248)
Q Consensus        43 ~~~~~k~~lVtGg~~gIG~aia~~l~~~G~~V~l~~r~~~~~~~~~~~l~~~~~~~v~~~~~D~~~~~~~~~~~~~~~~~  122 (248)
                      .++++|++|||||++|||++++++|+++|++|++++|+.++.++..+++++.+. ++.++.+|++|.++++++++++.++
T Consensus         3 ~~l~~k~vlVTGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~-~~~~~~~D~~~~~~~~~~~~~~~~~   81 (262)
T 1zem_A            3 KKFNGKVCLVTGAGGNIGLATALRLAEEGTAIALLDMNREALEKAEASVREKGV-EARSYVCDVTSEEAVIGTVDSVVRD   81 (262)
T ss_dssp             CTTTTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHTTTS-CEEEEECCTTCHHHHHHHHHHHHHH
T ss_pred             cccCCCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcCC-cEEEEEecCCCHHHHHHHHHHHHHH
Confidence            468999999999999999999999999999999999999888888887776543 7889999999999999999999999


Q ss_pred             cCCccEEEEccccC-CcccccccCChHHHHHHHHhhhHHHHHHHHHHhhhhhhc-CCeEEEEcCccccccCCCCccchHH
Q 044010          123 FGRLDHLVNNAGIS-SVALFEDIVNITDFKQIMNINFWGSVYTTRFAVPHLRYT-KGKIVVLSSAASWLTAPRMSFYNAS  200 (248)
Q Consensus       123 ~g~id~vv~~ag~~-~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~-~g~iV~isS~~~~~~~~~~~~Y~~s  200 (248)
                      +|++|++|||||.. ...++.+ .+.++|++.+++|+.+++++++++.|.|.++ .|+||++||..+..+.++..+|++|
T Consensus        82 ~g~id~lv~nAg~~~~~~~~~~-~~~~~~~~~~~~N~~g~~~~~~~~~~~~~~~~~g~iv~isS~~~~~~~~~~~~Y~as  160 (262)
T 1zem_A           82 FGKIDFLFNNAGYQGAFAPVQD-YPSDDFARVLTINVTGAFHVLKAVSRQMITQNYGRIVNTASMAGVKGPPNMAAYGTS  160 (262)
T ss_dssp             HSCCCEEEECCCCCCCCBCGGG-CCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEEECCHHHHSCCTTBHHHHHH
T ss_pred             hCCCCEEEECCCCCCCCCcccc-CCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcCCcEEEEEcchhhccCCCCCchHHHH
Confidence            99999999999987 4444444 5789999999999999999999999998754 4899999999999998999999999


Q ss_pred             HHHHHHHHHHHHHHhCC-CeEEEEEecCccccCcccc
Q 044010          201 KAALVLFFETLRVELGS-DVGVTIVTPGFIESELTQG  236 (248)
Q Consensus       201 Kaal~~l~~~la~~~~~-~i~v~~v~pg~v~T~~~~~  236 (248)
                      |+++++++++++.|+++ +||||+|+||+++|+|...
T Consensus       161 K~a~~~~~~~la~e~~~~gi~vn~v~PG~v~t~~~~~  197 (262)
T 1zem_A          161 KGAIIALTETAALDLAPYNIRVNAISPGYMGPGFMWE  197 (262)
T ss_dssp             HHHHHHHHHHHHHHHGGGTEEEEEEEECSBCSSHHHH
T ss_pred             HHHHHHHHHHHHHHHHhhCeEEEEEecCCcCcchhhh
Confidence            99999999999999987 4999999999999998654

>3oec_A Carveol dehydrogenase (mytha.01326.C, A0R518 HOMO; ssgcid, structural genomics; 1.95A {Mycobacterium thermoresistibile}

Probab=100.00  E-value=5.2e-39  Score=278.00  Aligned_cols=191  Identities=29%  Similarity=0.443  Sum_probs=172.8

Q ss_pred             cCCCCCEEEEcCCCChHHHHHHHHHHHcCCeEEEEeCC------------cchHHHHHHHHHhhCCCcEEEEEccCCCHH
Q 044010           43 EDVSGKVVIITGASSGIGEHLAYEYARRGACLALCARR------------EKSLEEVADTAREIGSPDVITIRADVSKVD  110 (248)
Q Consensus        43 ~~~~~k~~lVtGg~~gIG~aia~~l~~~G~~V~l~~r~------------~~~~~~~~~~l~~~~~~~v~~~~~D~~~~~  110 (248)
                      .+++||++|||||++|||+++|++|+++|++|++++|+            .+++++..+++++.+ .++.++.+|++|.+
T Consensus        42 ~~l~gk~~lVTGas~GIG~aia~~la~~G~~Vv~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~Dv~d~~  120 (317)
T 3oec_A           42 NRLQGKVAFITGAARGQGRTHAVRLAQDGADIVAIDLCRQQPNLDYAQGSPEELKETVRLVEEQG-RRIIARQADVRDLA  120 (317)
T ss_dssp             CTTTTCEEEESSCSSHHHHHHHHHHHHTTCEEEEEECCCCCTTCCSCCCCHHHHHHHHHHHHHTT-CCEEEEECCTTCHH
T ss_pred             hccCCCEEEEeCCCcHHHHHHHHHHHHCCCeEEEEecccccccccccccCHHHHHHHHHHHHhcC-CeEEEEECCCCCHH
Confidence            36899999999999999999999999999999999886            455566666666555 47999999999999


Q ss_pred             HHHHHHHHHHhHcCCccEEEEccccCCcccccccCChHHHHHHHHhhhHHHHHHHHHHhhhhhhc--CCeEEEEcCcccc
Q 044010          111 DCRSLVEETMNHFGRLDHLVNNAGISSVALFEDIVNITDFKQIMNINFWGSVYTTRFAVPHLRYT--KGKIVVLSSAASW  188 (248)
Q Consensus       111 ~~~~~~~~~~~~~g~id~vv~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~--~g~iV~isS~~~~  188 (248)
                      +++++++++.+++|++|++|||||.....++.+ .+.++|++.+++|+.++++++++++|.|.++  +|+||++||..+.
T Consensus       121 ~v~~~~~~~~~~~g~iD~lVnnAg~~~~~~~~~-~~~~~~~~~~~vN~~g~~~l~~~~~~~m~~~~~~g~Iv~isS~~~~  199 (317)
T 3oec_A          121 SLQAVVDEALAEFGHIDILVSNVGISNQGEVVS-LTDQQWSDILQTNLIGAWHACRAVLPSMIERGQGGSVIFVSSTVGL  199 (317)
T ss_dssp             HHHHHHHHHHHHHSCCCEEEECCCCCCCBCTTT-CCHHHHHHHHHHHTHHHHHHHHHHHHHHHHTCSCEEEEEECCGGGS
T ss_pred             HHHHHHHHHHHHcCCCCEEEECCCCCCCCCccc-CCHHHHHHHHHHhhHHHHHHHHHHHHHHHHcCCCCEEEEECcHHhc
Confidence            999999999999999999999999887766655 5789999999999999999999999999754  4899999999999


Q ss_pred             ccCCCCccchHHHHHHHHHHHHHHHHhCC-CeEEEEEecCccccCccc
Q 044010          189 LTAPRMSFYNASKAALVLFFETLRVELGS-DVGVTIVTPGFIESELTQ  235 (248)
Q Consensus       189 ~~~~~~~~Y~~sKaal~~l~~~la~~~~~-~i~v~~v~pg~v~T~~~~  235 (248)
                      .+.++...|++||+|+++|+++++.|+++ +|+||+|+||+|+|+|..
T Consensus       200 ~~~~~~~~Y~asKaa~~~l~~~la~e~~~~gI~vn~v~PG~v~T~~~~  247 (317)
T 3oec_A          200 RGAPGQSHYAASKHGVQGLMLSLANEVGRHNIRVNSVNPGAVNTEMAL  247 (317)
T ss_dssp             SCCTTBHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECSBSSHHHH
T ss_pred             CCCCCCcchHHHHHHHHHHHHHHHHHHhhcCeEEEEEecCcccCcccc
Confidence            99999999999999999999999999987 499999999999999864

>3gem_A Short chain dehydrogenase; structural genomics, APC65077, oxidoreductase, PSI-2, protein structure initiative; 1.83A {Pseudomonas syringae PV}

Probab=100.00  E-value=6.1e-39  Score=270.25  Aligned_cols=186  Identities=18%  Similarity=0.228  Sum_probs=161.0

Q ss_pred             ccCCCCCEEEEcCCCChHHHHHHHHHHHcCCeEEEEeCCcchHHHHHHHHHhhCCCcEEEEEccCCCHHHHHHHHHHHHh
Q 044010           42 SEDVSGKVVIITGASSGIGEHLAYEYARRGACLALCARREKSLEEVADTAREIGSPDVITIRADVSKVDDCRSLVEETMN  121 (248)
Q Consensus        42 ~~~~~~k~~lVtGg~~gIG~aia~~l~~~G~~V~l~~r~~~~~~~~~~~l~~~~~~~v~~~~~D~~~~~~~~~~~~~~~~  121 (248)
                      .+++++|++|||||++|||+++|++|+++|++|++++|+.++..+.   +++.   .+.++.+|++|.++++++++++.+
T Consensus        22 ~m~l~~k~vlVTGas~gIG~aia~~l~~~G~~V~~~~r~~~~~~~~---~~~~---~~~~~~~Dv~~~~~v~~~~~~~~~   95 (260)
T 3gem_A           22 HMTLSSAPILITGASQRVGLHCALRLLEHGHRVIISYRTEHASVTE---LRQA---GAVALYGDFSCETGIMAFIDLLKT   95 (260)
T ss_dssp             -----CCCEEESSTTSHHHHHHHHHHHHTTCCEEEEESSCCHHHHH---HHHH---TCEEEECCTTSHHHHHHHHHHHHH
T ss_pred             CcCCCCCEEEEECCCCHHHHHHHHHHHHCCCEEEEEeCChHHHHHH---HHhc---CCeEEECCCCCHHHHHHHHHHHHH
Confidence            4688999999999999999999999999999999999998765433   3332   367899999999999999999999


Q ss_pred             HcCCccEEEEccccCCcccccccCChHHHHHHHHhhhHHHHHHHHHHhhhhhhcC-CeEEEEcCccccccCCCCccchHH
Q 044010          122 HFGRLDHLVNNAGISSVALFEDIVNITDFKQIMNINFWGSVYTTRFAVPHLRYTK-GKIVVLSSAASWLTAPRMSFYNAS  200 (248)
Q Consensus       122 ~~g~id~vv~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~-g~iV~isS~~~~~~~~~~~~Y~~s  200 (248)
                      ++|++|++|||||...... .+ .+.++|++.+++|+.+++++++++.|.|++.+ |+||++||..+..+.++...|++|
T Consensus        96 ~~g~iD~lv~nAg~~~~~~-~~-~~~~~~~~~~~vN~~g~~~~~~~~~~~m~~~~~g~iv~isS~~~~~~~~~~~~Y~as  173 (260)
T 3gem_A           96 QTSSLRAVVHNASEWLAET-PG-EEADNFTRMFSVHMLAPYLINLHCEPLLTASEVADIVHISDDVTRKGSSKHIAYCAT  173 (260)
T ss_dssp             HCSCCSEEEECCCCCCCCC-TT-CHHHHHHHHHHHHTHHHHHHHHHHHHHHHTSSSCEEEEECCGGGGTCCSSCHHHHHH
T ss_pred             hcCCCCEEEECCCccCCCC-CC-CCHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCcEEEEECChhhcCCCCCcHhHHHH
Confidence            9999999999999876554 22 46789999999999999999999999998654 899999999999999999999999


Q ss_pred             HHHHHHHHHHHHHHhCCCeEEEEEecCccccCccc
Q 044010          201 KAALVLFFETLRVELGSDVGVTIVTPGFIESELTQ  235 (248)
Q Consensus       201 Kaal~~l~~~la~~~~~~i~v~~v~pg~v~T~~~~  235 (248)
                      |+|+++|+++++.|++++||||+|+||+++|++..
T Consensus       174 Kaa~~~l~~~la~e~~~~Irvn~v~PG~v~t~~~~  208 (260)
T 3gem_A          174 KAGLESLTLSFAARFAPLVKVNGIAPALLMFQPKD  208 (260)
T ss_dssp             HHHHHHHHHHHHHHHTTTCEEEEEEECTTCC----
T ss_pred             HHHHHHHHHHHHHHHCCCCEEEEEeecccccCCCC
Confidence            99999999999999988899999999999999754

>4iin_A 3-ketoacyl-acyl carrier protein reductase (FABG); structural genomics, center for structural genomics of infec diseases, csgid; HET: NAD; 2.40A {Helicobacter pylori} PDB: 4ijk_A

Probab=100.00  E-value=5.7e-39  Score=271.71  Aligned_cols=198  Identities=25%  Similarity=0.331  Sum_probs=171.7

Q ss_pred             hccccCCCCCEEEEcCCCChHHHHHHHHHHHcCCeEEEEeCC-cchHHHHHHHHHhhCCCcEEEEEccCCCHHHHHHHHH
Q 044010           39 SIFSEDVSGKVVIITGASSGIGEHLAYEYARRGACLALCARR-EKSLEEVADTAREIGSPDVITIRADVSKVDDCRSLVE  117 (248)
Q Consensus        39 ~~~~~~~~~k~~lVtGg~~gIG~aia~~l~~~G~~V~l~~r~-~~~~~~~~~~l~~~~~~~v~~~~~D~~~~~~~~~~~~  117 (248)
                      ....++++||++|||||++|||+++|++|+++|++|++++|+ .+..+...+++++.+ .++.++.+|++|.++++++++
T Consensus        21 ~~~~m~l~~k~vlITGas~gIG~~la~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~-~~~~~~~~D~~~~~~v~~~~~   99 (271)
T 4iin_A           21 QSNAMQFTGKNVLITGASKGIGAEIAKTLASMGLKVWINYRSNAEVADALKNELEEKG-YKAAVIKFDAASESDFIEAIQ   99 (271)
T ss_dssp             ---CCCCSCCEEEETTCSSHHHHHHHHHHHHTTCEEEEEESSCHHHHHHHHHHHHHTT-CCEEEEECCTTCHHHHHHHHH
T ss_pred             hhhhcccCCCEEEEECCCcHHHHHHHHHHHHCCCEEEEEeCCCHHHHHHHHHHHHhcC-CceEEEECCCCCHHHHHHHHH
Confidence            344578999999999999999999999999999999999995 444555666666555 489999999999999999999


Q ss_pred             HHHhHcCCccEEEEccccCCcccccccCChHHHHHHHHhhhHHHHHHHHHHhhhhhhcC-CeEEEEcCccccccCCCCcc
Q 044010          118 ETMNHFGRLDHLVNNAGISSVALFEDIVNITDFKQIMNINFWGSVYTTRFAVPHLRYTK-GKIVVLSSAASWLTAPRMSF  196 (248)
Q Consensus       118 ~~~~~~g~id~vv~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~-g~iV~isS~~~~~~~~~~~~  196 (248)
                      ++.+++|++|++|||||........+ .+.++|++.+++|+.+++.+++.++|.|++++ |+||++||..+..+.++...
T Consensus       100 ~~~~~~g~id~li~nAg~~~~~~~~~-~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~~~g~iv~isS~~~~~~~~~~~~  178 (271)
T 4iin_A          100 TIVQSDGGLSYLVNNAGVVRDKLAIK-MKTEDFHHVIDNNLTSAFIGCREALKVMSKSRFGSVVNVASIIGERGNMGQTN  178 (271)
T ss_dssp             HHHHHHSSCCEEEECCCCCCCCCGGG-CCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEEECCHHHHHCCTTCHH
T ss_pred             HHHHhcCCCCEEEECCCcCCCccccc-CCHHHHHHHHHhccHHHHHHHHHHHHHHhhcCCCEEEEEechhhcCCCCCchH
Confidence            99999999999999999987766655 57899999999999999999999999987554 89999999999999999999


Q ss_pred             chHHHHHHHHHHHHHHHHhCC-CeEEEEEecCccccCcccccc
Q 044010          197 YNASKAALVLFFETLRVELGS-DVGVTIVTPGFIESELTQGKF  238 (248)
Q Consensus       197 Y~~sKaal~~l~~~la~~~~~-~i~v~~v~pg~v~T~~~~~~~  238 (248)
                      |++||+|+++++++++.|+++ +|+||+|+||+++|+|.+...
T Consensus       179 Y~asK~a~~~~~~~la~e~~~~gi~v~~v~PG~v~T~~~~~~~  221 (271)
T 4iin_A          179 YSASKGGMIAMSKSFAYEGALRNIRFNSVTPGFIETDMNANLK  221 (271)
T ss_dssp             HHHHHHHHHHHHHHHHHHHHTTTEEEEEEEECSBCCC------
T ss_pred             hHHHHHHHHHHHHHHHHHHHHhCcEEEEEEeCcccCCchhhhc
Confidence            999999999999999999976 499999999999999987653

>1iy8_A Levodione reductase; oxidoreductase; HET: NAD; 1.60A {Leifsonia aquatica} SCOP: c.2.1.2

Probab=100.00  E-value=6.9e-39  Score=270.54  Aligned_cols=193  Identities=28%  Similarity=0.397  Sum_probs=174.6

Q ss_pred             cCCCCCEEEEcCCCChHHHHHHHHHHHcCCeEEEEeCCcchHHHHHHHHHhhC-CCcEEEEEccCCCHHHHHHHHHHHHh
Q 044010           43 EDVSGKVVIITGASSGIGEHLAYEYARRGACLALCARREKSLEEVADTAREIG-SPDVITIRADVSKVDDCRSLVEETMN  121 (248)
Q Consensus        43 ~~~~~k~~lVtGg~~gIG~aia~~l~~~G~~V~l~~r~~~~~~~~~~~l~~~~-~~~v~~~~~D~~~~~~~~~~~~~~~~  121 (248)
                      .++++|++|||||++|||+++|++|+++|++|++++|+.++.++..+++.+.. +.++.++.+|++|.++++++++++.+
T Consensus         9 ~~l~~k~vlVTGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~v~~~~~~~~~   88 (267)
T 1iy8_A            9 TRFTDRVVLITGGGSGLGRATAVRLAAEGAKLSLVDVSSEGLEASKAAVLETAPDAEVLTTVADVSDEAQVEAYVTATTE   88 (267)
T ss_dssp             -CCTTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHHCTTCCEEEEECCTTSHHHHHHHHHHHHH
T ss_pred             ccCCCCEEEEECCCCHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhhcCCceEEEEEccCCCHHHHHHHHHHHHH
Confidence            46899999999999999999999999999999999999988888877776652 34788999999999999999999999


Q ss_pred             HcCCccEEEEccccCCc-ccccccCChHHHHHHHHhhhHHHHHHHHHHhhhhhhc-CCeEEEEcCccccccCCCCccchH
Q 044010          122 HFGRLDHLVNNAGISSV-ALFEDIVNITDFKQIMNINFWGSVYTTRFAVPHLRYT-KGKIVVLSSAASWLTAPRMSFYNA  199 (248)
Q Consensus       122 ~~g~id~vv~~ag~~~~-~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~-~g~iV~isS~~~~~~~~~~~~Y~~  199 (248)
                      ++|++|++|||||.... .++.+ .+.++|++.+++|+.+++.+++.++|.|+++ .|+||++||..+..+.++..+|++
T Consensus        89 ~~g~id~lv~nAg~~~~~~~~~~-~~~~~~~~~~~~N~~g~~~~~~~~~~~~~~~~~g~iv~isS~~~~~~~~~~~~Y~a  167 (267)
T 1iy8_A           89 RFGRIDGFFNNAGIEGKQNPTES-FTAAEFDKVVSINLRGVFLGLEKVLKIMREQGSGMVVNTASVGGIRGIGNQSGYAA  167 (267)
T ss_dssp             HHSCCSEEEECCCCCCCCBCGGG-SCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCCEEEEECCGGGTSBCSSBHHHHH
T ss_pred             HcCCCCEEEECCCcCCCCCCccc-CCHHHHHHHHHHhhHHHHHHHHHHHHHHHHcCCCEEEEEcchhhccCCCCCccHHH
Confidence            99999999999998765 44444 5789999999999999999999999999754 499999999999999899999999


Q ss_pred             HHHHHHHHHHHHHHHhCC-CeEEEEEecCccccCcccc
Q 044010          200 SKAALVLFFETLRVELGS-DVGVTIVTPGFIESELTQG  236 (248)
Q Consensus       200 sKaal~~l~~~la~~~~~-~i~v~~v~pg~v~T~~~~~  236 (248)
                      ||+++++++++++.|+++ +||||+|+||+++|+|.+.
T Consensus       168 sK~a~~~~~~~la~e~~~~gi~v~~v~PG~v~t~~~~~  205 (267)
T 1iy8_A          168 AKHGVVGLTRNSAVEYGRYGIRINAIAPGAIWTPMVEN  205 (267)
T ss_dssp             HHHHHHHHHHHHHHHHGGGTCEEEEEEECSBCSHHHHH
T ss_pred             HHHHHHHHHHHHHHHHHhcCeEEEEEEeCCCcCcchhc
Confidence            999999999999999987 5999999999999998654

>3ai3_A NADPH-sorbose reductase; rossmann-fold, NADPH-dependent reductase, short chain dehydrogenase/reductase, oxidoreductase; HET: NAP SOL SOE; 1.80A {Gluconobacter frateurii} PDB: 3ai2_A* 3ai1_A*

Probab=100.00  E-value=5.6e-39  Score=270.45  Aligned_cols=194  Identities=31%  Similarity=0.399  Sum_probs=175.6

Q ss_pred             ccCCCCCEEEEcCCCChHHHHHHHHHHHcCCeEEEEeCCcchHHHHHHHHHhhCCCcEEEEEccCCCHHHHHHHHHHHHh
Q 044010           42 SEDVSGKVVIITGASSGIGEHLAYEYARRGACLALCARREKSLEEVADTAREIGSPDVITIRADVSKVDDCRSLVEETMN  121 (248)
Q Consensus        42 ~~~~~~k~~lVtGg~~gIG~aia~~l~~~G~~V~l~~r~~~~~~~~~~~l~~~~~~~v~~~~~D~~~~~~~~~~~~~~~~  121 (248)
                      .+++++|++|||||++|||++++++|+++|++|++++|+.++.++..+++++..+.++.++.+|++|.++++++++++.+
T Consensus         2 ~~~l~~k~vlVTGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~   81 (263)
T 3ai3_A            2 DMGISGKVAVITGSSSGIGLAIAEGFAKEGAHIVLVARQVDRLHEAARSLKEKFGVRVLEVAVDVATPEGVDAVVESVRS   81 (263)
T ss_dssp             CCCCTTCEEEEESCSSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHHHCCCEEEEECCTTSHHHHHHHHHHHHH
T ss_pred             CCCCCCCEEEEECCCchHHHHHHHHHHHCCCEEEEEcCCHHHHHHHHHHHHHhcCCceEEEEcCCCCHHHHHHHHHHHHH
Confidence            35789999999999999999999999999999999999988888877777665234788999999999999999999999


Q ss_pred             HcCCccEEEEccccCCcccccccCChHHHHHHHHhhhHHHHHHHHHHhhhhhhc-CCeEEEEcCccccccCCCCccchHH
Q 044010          122 HFGRLDHLVNNAGISSVALFEDIVNITDFKQIMNINFWGSVYTTRFAVPHLRYT-KGKIVVLSSAASWLTAPRMSFYNAS  200 (248)
Q Consensus       122 ~~g~id~vv~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~-~g~iV~isS~~~~~~~~~~~~Y~~s  200 (248)
                      ++|++|++|||||.....++.+ .+.++|++.+++|+.+++.+++.+.|.|+++ .|+||++||..+..+.++..+|++|
T Consensus        82 ~~g~id~lv~~Ag~~~~~~~~~-~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~g~iv~isS~~~~~~~~~~~~Y~~s  160 (263)
T 3ai3_A           82 SFGGADILVNNAGTGSNETIME-AADEKWQFYWELLVMAAVRLARGLVPGMRARGGGAIIHNASICAVQPLWYEPIYNVT  160 (263)
T ss_dssp             HHSSCSEEEECCCCCCCCCTTT-CCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEEECCGGGTSCCTTCHHHHHH
T ss_pred             HcCCCCEEEECCCCCCCCCccc-CCHHHHHHHHHHHhHHHHHHHHHHHHHHHHcCCcEEEEECchhhcCCCCCcchHHHH
Confidence            9999999999999876655555 5789999999999999999999999998754 4899999999999988899999999


Q ss_pred             HHHHHHHHHHHHHHhCC-CeEEEEEecCccccCcccc
Q 044010          201 KAALVLFFETLRVELGS-DVGVTIVTPGFIESELTQG  236 (248)
Q Consensus       201 Kaal~~l~~~la~~~~~-~i~v~~v~pg~v~T~~~~~  236 (248)
                      |+++++++++++.|+++ +||||+|+||+++|++...
T Consensus       161 K~a~~~~~~~la~e~~~~gi~v~~v~Pg~v~t~~~~~  197 (263)
T 3ai3_A          161 KAALMMFSKTLATEVIKDNIRVNCINPGLILTPDWIK  197 (263)
T ss_dssp             HHHHHHHHHHHHHHHGGGTEEEEEEEECCBCCHHHHH
T ss_pred             HHHHHHHHHHHHHHhhhcCcEEEEEecCcccCcchhh
Confidence            99999999999999987 5999999999999998654

>3v2g_A 3-oxoacyl-[acyl-carrier-protein] reductase; structural genomics, PSI-biology, protein structure initiati nysgrc; 2.30A {Sinorhizobium meliloti}

Probab=100.00  E-value=1.2e-38  Score=269.91  Aligned_cols=191  Identities=33%  Similarity=0.514  Sum_probs=171.8

Q ss_pred             cCCCCCEEEEcCCCChHHHHHHHHHHHcCCeEEEEeCCc-chHHHHHHHHHhhCCCcEEEEEccCCCHHHHHHHHHHHHh
Q 044010           43 EDVSGKVVIITGASSGIGEHLAYEYARRGACLALCARRE-KSLEEVADTAREIGSPDVITIRADVSKVDDCRSLVEETMN  121 (248)
Q Consensus        43 ~~~~~k~~lVtGg~~gIG~aia~~l~~~G~~V~l~~r~~-~~~~~~~~~l~~~~~~~v~~~~~D~~~~~~~~~~~~~~~~  121 (248)
                      .+++||++|||||++|||+++|++|+++|++|++++++. +..++..+++++.+. ++.++.+|++|.++++++++++.+
T Consensus        27 ~~l~gk~~lVTGas~GIG~aia~~la~~G~~V~~~~~~~~~~~~~~~~~l~~~~~-~~~~~~~Dv~d~~~v~~~~~~~~~  105 (271)
T 3v2g_A           27 ISLAGKTAFVTGGSRGIGAAIAKRLALEGAAVALTYVNAAERAQAVVSEIEQAGG-RAVAIRADNRDAEAIEQAIRETVE  105 (271)
T ss_dssp             TCCTTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESSCHHHHHHHHHHHHHTTC-CEEEEECCTTCHHHHHHHHHHHHH
T ss_pred             cCCCCCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEeCCCHHHHHHHHHHHHhcCC-cEEEEECCCCCHHHHHHHHHHHHH
Confidence            478999999999999999999999999999999987654 566777777776554 789999999999999999999999


Q ss_pred             HcCCccEEEEccccCCcccccccCChHHHHHHHHhhhHHHHHHHHHHhhhhhhcCCeEEEEcCcccccc-CCCCccchHH
Q 044010          122 HFGRLDHLVNNAGISSVALFEDIVNITDFKQIMNINFWGSVYTTRFAVPHLRYTKGKIVVLSSAASWLT-APRMSFYNAS  200 (248)
Q Consensus       122 ~~g~id~vv~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~g~iV~isS~~~~~~-~~~~~~Y~~s  200 (248)
                      ++|++|++|||||.....++.+ .+.++|++.+++|+.+++.+++++.|.|+ ++|+||++||..+..+ .++..+|++|
T Consensus       106 ~~g~iD~lvnnAg~~~~~~~~~-~~~~~~~~~~~vN~~g~~~~~~~~~~~m~-~~g~iv~isS~~~~~~~~~~~~~Y~as  183 (271)
T 3v2g_A          106 ALGGLDILVNSAGIWHSAPLEE-TTVADFDEVMAVNFRAPFVAIRSASRHLG-DGGRIITIGSNLAELVPWPGISLYSAS  183 (271)
T ss_dssp             HHSCCCEEEECCCCCCCCCGGG-CCHHHHHHHHHHHTHHHHHHHHHHHHHCC-TTCEEEEECCGGGTCCCSTTCHHHHHH
T ss_pred             HcCCCcEEEECCCCCCCCChhh-CCHHHHHHHHHHHhHHHHHHHHHHHHHHh-cCCEEEEEeChhhccCCCCCchHHHHH
Confidence            9999999999999887666665 57899999999999999999999999996 4789999999777654 7889999999


Q ss_pred             HHHHHHHHHHHHHHhCCC-eEEEEEecCccccCcccc
Q 044010          201 KAALVLFFETLRVELGSD-VGVTIVTPGFIESELTQG  236 (248)
Q Consensus       201 Kaal~~l~~~la~~~~~~-i~v~~v~pg~v~T~~~~~  236 (248)
                      |+|+++|+++++.|+++. ||||+|+||+|+|+|...
T Consensus       184 Kaa~~~l~~~la~e~~~~gIrvn~v~PG~v~T~~~~~  220 (271)
T 3v2g_A          184 KAALAGLTKGLARDLGPRGITVNIVHPGSTDTDMNPA  220 (271)
T ss_dssp             HHHHHHHHHHHHHHHGGGTCEEEEEEECSBCSSSSCS
T ss_pred             HHHHHHHHHHHHHHhhhhCeEEEEEecCCCcCCcccc
Confidence            999999999999999874 999999999999999764

>1ae1_A Tropinone reductase-I; oxidoreductase, tropane alkaloid biosynthesis, reduction of tropinone to tropine, short-chain dehydrogenase; HET: NAP; 2.40A {Datura stramonium} SCOP: c.2.1.2

Probab=100.00  E-value=1.1e-38  Score=270.23  Aligned_cols=193  Identities=32%  Similarity=0.468  Sum_probs=171.0

Q ss_pred             cCCCCCEEEEcCCCChHHHHHHHHHHHcCCeEEEEeCCcchHHHHHHHHHhhCCCcEEEEEccCCCHHHHHHHHHHHHhH
Q 044010           43 EDVSGKVVIITGASSGIGEHLAYEYARRGACLALCARREKSLEEVADTAREIGSPDVITIRADVSKVDDCRSLVEETMNH  122 (248)
Q Consensus        43 ~~~~~k~~lVtGg~~gIG~aia~~l~~~G~~V~l~~r~~~~~~~~~~~l~~~~~~~v~~~~~D~~~~~~~~~~~~~~~~~  122 (248)
                      +++++|++|||||++|||+++|++|+++|++|++++|+.++.++..+++++.+. ++.++.+|++|.++++++++++.++
T Consensus        17 ~~l~~k~vlVTGas~gIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~-~~~~~~~D~~~~~~~~~~~~~~~~~   95 (273)
T 1ae1_A           17 WSLKGTTALVTGGSKGIGYAIVEELAGLGARVYTCSRNEKELDECLEIWREKGL-NVEGSVCDLLSRTERDKLMQTVAHV   95 (273)
T ss_dssp             CCCTTCEEEEESCSSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHTTC-CEEEEECCTTCHHHHHHHHHHHHHH
T ss_pred             CCCCCCEEEEECCcchHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcCC-ceEEEECCCCCHHHHHHHHHHHHHH
Confidence            568999999999999999999999999999999999999888888787776543 7889999999999999999999999


Q ss_pred             c-CCccEEEEccccCCcccccccCChHHHHHHHHhhhHHHHHHHHHHhhhhhhc-CCeEEEEcCccccccCCCCccchHH
Q 044010          123 F-GRLDHLVNNAGISSVALFEDIVNITDFKQIMNINFWGSVYTTRFAVPHLRYT-KGKIVVLSSAASWLTAPRMSFYNAS  200 (248)
Q Consensus       123 ~-g~id~vv~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~-~g~iV~isS~~~~~~~~~~~~Y~~s  200 (248)
                      + |++|++|||||.....++.+ .+.++|++.+++|+.+++.+++++.|.|+++ .|+||++||..+..+.++...|++|
T Consensus        96 ~~g~id~lv~nAg~~~~~~~~~-~~~~~~~~~~~~N~~g~~~~~~~~~~~m~~~~~g~iv~isS~~~~~~~~~~~~Y~as  174 (273)
T 1ae1_A           96 FDGKLNILVNNAGVVIHKEAKD-FTEKDYNIIMGTNFEAAYHLSQIAYPLLKASQNGNVIFLSSIAGFSALPSVSLYSAS  174 (273)
T ss_dssp             TTSCCCEEEECCCCCCCCCTTT-CCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTSEEEEEECCGGGTSCCTTCHHHHHH
T ss_pred             cCCCCcEEEECCCCCCCCChhh-CCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcCCcEEEEEcCHhhcCCCCCcchhHHH
Confidence            9 99999999999876655555 5789999999999999999999999999754 4899999999999998999999999


Q ss_pred             HHHHHHHHHHHHHHhCC-CeEEEEEecCccccCccccc
Q 044010          201 KAALVLFFETLRVELGS-DVGVTIVTPGFIESELTQGK  237 (248)
Q Consensus       201 Kaal~~l~~~la~~~~~-~i~v~~v~pg~v~T~~~~~~  237 (248)
                      |+++++++++++.|+++ +||||+|+||+++|++....
T Consensus       175 K~a~~~~~~~la~e~~~~gi~v~~v~Pg~v~t~~~~~~  212 (273)
T 1ae1_A          175 KGAINQMTKSLACEWAKDNIRVNSVAPGVILTPLVETA  212 (273)
T ss_dssp             HHHHHHHHHHHHHHHGGGTEEEEEEEECSBC-------
T ss_pred             HHHHHHHHHHHHHHHhhcCcEEEEEEeCCCcCchhhhh
Confidence            99999999999999987 59999999999999997643

>2ew8_A (S)-1-phenylethanol dehydrogenase; transferase; 2.10A {Azoarcus SP} SCOP: c.2.1.2 PDB: 2ewm_A*

Probab=100.00  E-value=1.1e-38  Score=266.78  Aligned_cols=188  Identities=29%  Similarity=0.525  Sum_probs=164.3

Q ss_pred             cCCCCCEEEEcCCCChHHHHHHHHHHHcCCeEEEEeCCc-chHHHHHHHHHhhCCCcEEEEEccCCCHHHHHHHHHHHHh
Q 044010           43 EDVSGKVVIITGASSGIGEHLAYEYARRGACLALCARRE-KSLEEVADTAREIGSPDVITIRADVSKVDDCRSLVEETMN  121 (248)
Q Consensus        43 ~~~~~k~~lVtGg~~gIG~aia~~l~~~G~~V~l~~r~~-~~~~~~~~~l~~~~~~~v~~~~~D~~~~~~~~~~~~~~~~  121 (248)
                      .++++|++|||||++|||++++++|+++|++|++++|+. ++.++   ++++.+ .++.++.+|++|.++++++++++.+
T Consensus         3 ~~l~~k~vlVTGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~---~~~~~~-~~~~~~~~Dv~~~~~v~~~~~~~~~   78 (249)
T 2ew8_A            3 QRLKDKLAVITGGANGIGRAIAERFAVEGADIAIADLVPAPEAEA---AIRNLG-RRVLTVKCDVSQPGDVEAFGKQVIS   78 (249)
T ss_dssp             CTTTTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESSCCHHHHH---HHHHTT-CCEEEEECCTTCHHHHHHHHHHHHH
T ss_pred             CCCCCCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEcCCchhHHHH---HHHhcC-CcEEEEEeecCCHHHHHHHHHHHHH
Confidence            468999999999999999999999999999999999987 55444   344433 4788999999999999999999999


Q ss_pred             HcCCccEEEEccccCCcccccccCChHHHHHHHHhhhHHHHHHHHHHhhhhhhc-CCeEEEEcCccccccCCCCccchHH
Q 044010          122 HFGRLDHLVNNAGISSVALFEDIVNITDFKQIMNINFWGSVYTTRFAVPHLRYT-KGKIVVLSSAASWLTAPRMSFYNAS  200 (248)
Q Consensus       122 ~~g~id~vv~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~-~g~iV~isS~~~~~~~~~~~~Y~~s  200 (248)
                      ++|++|++|||||.....++.+ .+.++|++.+++|+.++++++++++|.|+++ .|+||++||..+..+.++...|++|
T Consensus        79 ~~g~id~lv~nAg~~~~~~~~~-~~~~~~~~~~~~N~~g~~~~~~~~~~~~~~~~~g~iv~isS~~~~~~~~~~~~Y~as  157 (249)
T 2ew8_A           79 TFGRCDILVNNAGIYPLIPFDE-LTFEQWKKTFEINVDSGFLMAKAFVPGMKRNGWGRIINLTSTTYWLKIEAYTHYIST  157 (249)
T ss_dssp             HHSCCCEEEECCCCCCCCCGGG-CCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEEECCGGGGSCCSSCHHHHHH
T ss_pred             HcCCCCEEEECCCCCCCCCccc-CCHHHHHHHHHHHhHHHHHHHHHHHHHHHHcCCeEEEEEcchhhccCCCCchhHHHH
Confidence            9999999999999876665555 5789999999999999999999999998755 4899999999999998999999999


Q ss_pred             HHHHHHHHHHHHHHhCC-CeEEEEEecCccccCccc
Q 044010          201 KAALVLFFETLRVELGS-DVGVTIVTPGFIESELTQ  235 (248)
Q Consensus       201 Kaal~~l~~~la~~~~~-~i~v~~v~pg~v~T~~~~  235 (248)
                      |+++++++++++.|+++ +||||+|+||+++|++..
T Consensus       158 K~a~~~~~~~la~e~~~~gi~v~~v~Pg~v~t~~~~  193 (249)
T 2ew8_A          158 KAANIGFTRALASDLGKDGITVNAIAPSLVRTATTE  193 (249)
T ss_dssp             HHHHHHHHHHHHHHHGGGTEEEEEEEECCC------
T ss_pred             HHHHHHHHHHHHHHHHhcCcEEEEEecCcCcCccch
Confidence            99999999999999987 499999999999999976

>3sx2_A Putative 3-ketoacyl-(acyl-carrier-protein) reduct; ssgcid, 3-ketoacyl-(acyl-carrier-protein) reductase, mycobac paratuberculosis; HET: NAD; 1.50A {Mycobacterium avium subsp}

Probab=100.00  E-value=5.4e-39  Score=272.60  Aligned_cols=189  Identities=26%  Similarity=0.406  Sum_probs=169.0

Q ss_pred             ccCCCCCEEEEcCCCChHHHHHHHHHHHcCCeEEEEeCC------------cchHHHHHHHHHhhCCCcEEEEEccCCCH
Q 044010           42 SEDVSGKVVIITGASSGIGEHLAYEYARRGACLALCARR------------EKSLEEVADTAREIGSPDVITIRADVSKV  109 (248)
Q Consensus        42 ~~~~~~k~~lVtGg~~gIG~aia~~l~~~G~~V~l~~r~------------~~~~~~~~~~l~~~~~~~v~~~~~D~~~~  109 (248)
                      ..+++||++|||||++|||+++|++|+++|++|++++|+            .++.++..+++++.+. ++.++.+|++|+
T Consensus         8 ~~~l~gk~vlVTGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~D~~~~   86 (278)
T 3sx2_A            8 EGPLTGKVAFITGAARGQGRAHAVRLAADGADIIAVDLCDQIASVPYPLATPEELAATVKLVEDIGS-RIVARQADVRDR   86 (278)
T ss_dssp             -CTTTTCEEEEESTTSHHHHHHHHHHHHTTCEEEEEECCSCCTTCSSCCCCHHHHHHHHHHHHHHTC-CEEEEECCTTCH
T ss_pred             CCCCCCCEEEEECCCChHHHHHHHHHHHCCCeEEEEecccccccccccccchHHHHHHHHHHHhcCC-eEEEEeCCCCCH
Confidence            357899999999999999999999999999999999987            5556666666666654 899999999999


Q ss_pred             HHHHHHHHHHHhHcCCccEEEEccccCCcccccccCChHHHHHHHHhhhHHHHHHHHHHhhhhhhc--CCeEEEEcCccc
Q 044010          110 DDCRSLVEETMNHFGRLDHLVNNAGISSVALFEDIVNITDFKQIMNINFWGSVYTTRFAVPHLRYT--KGKIVVLSSAAS  187 (248)
Q Consensus       110 ~~~~~~~~~~~~~~g~id~vv~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~--~g~iV~isS~~~  187 (248)
                      ++++++++++.+++|++|++|||||......     +.++|++.+++|+.+++++++++.|.|.++  +|+||++||.++
T Consensus        87 ~~v~~~~~~~~~~~g~id~lv~nAg~~~~~~-----~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~~~~g~iv~isS~~~  161 (278)
T 3sx2_A           87 ESLSAALQAGLDELGRLDIVVANAGIAPMSA-----GDDGWHDVIDVNLTGVYHTIKVAIPTLVKQGTGGSIVLISSSAG  161 (278)
T ss_dssp             HHHHHHHHHHHHHHCCCCEEEECCCCCCCSS-----THHHHHHHHHHHTHHHHHHHHHHHHHHHHHCSCEEEEEECCGGG
T ss_pred             HHHHHHHHHHHHHcCCCCEEEECCCCCCCCC-----CHHHHHHHHHHHhHHHHHHHHHHHHHHHhCCCCcEEEEEccHHh
Confidence            9999999999999999999999999875432     468999999999999999999999998754  589999999999


Q ss_pred             cccC----CCCccchHHHHHHHHHHHHHHHHhCCC-eEEEEEecCccccCcccc
Q 044010          188 WLTA----PRMSFYNASKAALVLFFETLRVELGSD-VGVTIVTPGFIESELTQG  236 (248)
Q Consensus       188 ~~~~----~~~~~Y~~sKaal~~l~~~la~~~~~~-i~v~~v~pg~v~T~~~~~  236 (248)
                      ..+.    ++..+|++||+|+++|+++++.|+++. ||||+|+||+|+|+|...
T Consensus       162 ~~~~~~~~~~~~~Y~asKaa~~~~~~~la~e~~~~gi~vn~v~PG~v~T~~~~~  215 (278)
T 3sx2_A          162 LAGVGSADPGSVGYVAAKHGVVGLMRVYANLLAGQMIRVNSIHPSGVETPMINN  215 (278)
T ss_dssp             TSCCCCSSHHHHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEESCBSSTTTSS
T ss_pred             cCCCccCCCCchHhHHHHHHHHHHHHHHHHHHhccCcEEEEEecCCccCccchh
Confidence            8776    667789999999999999999999874 999999999999999874

>3kzv_A Uncharacterized oxidoreductase YIR035C; cytoplasmic protein, unknown function, structural genomics, MCSG, protein structure initiative; 2.00A {Saccharomyces cerevisiae}

Probab=100.00  E-value=1.5e-38  Score=266.78  Aligned_cols=186  Identities=27%  Similarity=0.432  Sum_probs=168.8

Q ss_pred             CCEEEEcCCCChHHHHHHHHHHHcC--CeEEEEeCCcchHHHHHHHHHhhCCCcEEEEEccCCCHHHHHHHHHHHHhHcC
Q 044010           47 GKVVIITGASSGIGEHLAYEYARRG--ACLALCARREKSLEEVADTAREIGSPDVITIRADVSKVDDCRSLVEETMNHFG  124 (248)
Q Consensus        47 ~k~~lVtGg~~gIG~aia~~l~~~G--~~V~l~~r~~~~~~~~~~~l~~~~~~~v~~~~~D~~~~~~~~~~~~~~~~~~g  124 (248)
                      ||++|||||++|||+++|++|+++|  ++|++.+|+.+++++..+++    +.++.++.+|++|.++++++++++.+++|
T Consensus         2 gk~~lVTGas~GIG~aia~~l~~~g~~~~v~~~~r~~~~~~~~~~~~----~~~~~~~~~Dv~~~~~v~~~~~~~~~~~g   77 (254)
T 3kzv_A            2 GKVILVTGVSRGIGKSIVDVLFSLDKDTVVYGVARSEAPLKKLKEKY----GDRFFYVVGDITEDSVLKQLVNAAVKGHG   77 (254)
T ss_dssp             CCEEEECSTTSHHHHHHHHHHHHHCSSCEEEEEESCHHHHHHHHHHH----GGGEEEEESCTTSHHHHHHHHHHHHHHHS
T ss_pred             CCEEEEECCCchHHHHHHHHHHhcCCCeEEEEecCCHHHHHHHHHHh----CCceEEEECCCCCHHHHHHHHHHHHHhcC
Confidence            6899999999999999999999985  68999999988777766655    23789999999999999999999999999


Q ss_pred             CccEEEEccccCCc-ccccccCChHHHHHHHHhhhHHHHHHHHHHhhhhhhcCCeEEEEcCccccccCCCCccchHHHHH
Q 044010          125 RLDHLVNNAGISSV-ALFEDIVNITDFKQIMNINFWGSVYTTRFAVPHLRYTKGKIVVLSSAASWLTAPRMSFYNASKAA  203 (248)
Q Consensus       125 ~id~vv~~ag~~~~-~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~g~iV~isS~~~~~~~~~~~~Y~~sKaa  203 (248)
                      ++|++|||||...+ .++.+ .+.++|++.+++|+.+++.++++++|.|++++|+||++||..+..+.++...|++||+|
T Consensus        78 ~id~lvnnAg~~~~~~~~~~-~~~~~~~~~~~~N~~g~~~~~~~~~~~m~~~~g~iv~isS~~~~~~~~~~~~Y~asK~a  156 (254)
T 3kzv_A           78 KIDSLVANAGVLEPVQNVNE-IDVNAWKKLYDINFFSIVSLVGIALPELKKTNGNVVFVSSDACNMYFSSWGAYGSSKAA  156 (254)
T ss_dssp             CCCEEEEECCCCCCCTTTTS-CCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEECCSCCCCSSCCSHHHHHHHHH
T ss_pred             CccEEEECCcccCCCCCccc-CCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcCCeEEEEcCchhccCCCCcchHHHHHHH
Confidence            99999999998654 44444 68899999999999999999999999998777999999999999999999999999999


Q ss_pred             HHHHHHHHHHHhCCCeEEEEEecCccccCcccccc
Q 044010          204 LVLFFETLRVELGSDVGVTIVTPGFIESELTQGKF  238 (248)
Q Consensus       204 l~~l~~~la~~~~~~i~v~~v~pg~v~T~~~~~~~  238 (248)
                      +++|+++++.|+ ++||||+|+||+++|+|.+...
T Consensus       157 ~~~~~~~la~e~-~~i~vn~v~PG~v~t~~~~~~~  190 (254)
T 3kzv_A          157 LNHFAMTLANEE-RQVKAIAVAPGIVDTDMQVNIR  190 (254)
T ss_dssp             HHHHHHHHHHHC-TTSEEEEEECSSCCCCCSCCCC
T ss_pred             HHHHHHHHHhhc-cCcEEEEEeCCcccchhHHHhh
Confidence            999999999998 6799999999999999987653

>3p19_A BFPVVD8, putative blue fluorescent protein; rossmann-fold, oxidoreductase; HET: NAP; 2.05A {Vibrio vulnificus}

Probab=100.00  E-value=2.7e-39  Score=273.28  Aligned_cols=190  Identities=26%  Similarity=0.419  Sum_probs=167.8

Q ss_pred             cccCCCCCEEEEcCCCChHHHHHHHHHHHcCCeEEEEeCCcchHHHHHHHHHhhCCCcEEEEEccCCCHHHHHHHHHHHH
Q 044010           41 FSEDVSGKVVIITGASSGIGEHLAYEYARRGACLALCARREKSLEEVADTAREIGSPDVITIRADVSKVDDCRSLVEETM  120 (248)
Q Consensus        41 ~~~~~~~k~~lVtGg~~gIG~aia~~l~~~G~~V~l~~r~~~~~~~~~~~l~~~~~~~v~~~~~D~~~~~~~~~~~~~~~  120 (248)
                      +..++.+|++|||||++|||+++|++|+++|++|++++|+.+++++       ....++.++.+|++|.++++++++++.
T Consensus        10 m~~~~~~k~vlVTGas~gIG~aia~~l~~~G~~V~~~~r~~~~~~~-------~~~~~~~~~~~Dv~d~~~v~~~~~~~~   82 (266)
T 3p19_A           10 MGRGSMKKLVVITGASSGIGEAIARRFSEEGHPLLLLARRVERLKA-------LNLPNTLCAQVDVTDKYTFDTAITRAE   82 (266)
T ss_dssp             -----CCCEEEEESTTSHHHHHHHHHHHHTTCCEEEEESCHHHHHT-------TCCTTEEEEECCTTCHHHHHHHHHHHH
T ss_pred             CCCCCCCCEEEEECCCCHHHHHHHHHHHHCCCEEEEEECCHHHHHH-------hhcCCceEEEecCCCHHHHHHHHHHHH
Confidence            3456889999999999999999999999999999999998754432       222368899999999999999999999


Q ss_pred             hHcCCccEEEEccccCCcccccccCChHHHHHHHHhhhHHHHHHHHHHhhhhhhc-CCeEEEEcCccccccCCCCccchH
Q 044010          121 NHFGRLDHLVNNAGISSVALFEDIVNITDFKQIMNINFWGSVYTTRFAVPHLRYT-KGKIVVLSSAASWLTAPRMSFYNA  199 (248)
Q Consensus       121 ~~~g~id~vv~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~-~g~iV~isS~~~~~~~~~~~~Y~~  199 (248)
                      +++|++|++|||||.....++.+ .+.++|++.+++|+.|++++++.++|.|+++ .|+||++||.++..+.++...|++
T Consensus        83 ~~~g~iD~lvnnAg~~~~~~~~~-~~~~~~~~~~~vN~~g~~~~~~~~~~~~~~~~~g~IV~isS~~~~~~~~~~~~Y~a  161 (266)
T 3p19_A           83 KIYGPADAIVNNAGMMLLGQIDT-QEANEWQRMFDVNVLGLLNGMQAVLAPMKARNCGTIINISSIAGKKTFPDHAAYCG  161 (266)
T ss_dssp             HHHCSEEEEEECCCCCCCCCTTT-SCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCCEEEEECCGGGTSCCTTCHHHHH
T ss_pred             HHCCCCCEEEECCCcCCCCCccc-CCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcCCcEEEEEcChhhCCCCCCCchHHH
Confidence            99999999999999887666655 5789999999999999999999999998754 599999999999999999999999


Q ss_pred             HHHHHHHHHHHHHHHhCC-CeEEEEEecCccccCcccccc
Q 044010          200 SKAALVLFFETLRVELGS-DVGVTIVTPGFIESELTQGKF  238 (248)
Q Consensus       200 sKaal~~l~~~la~~~~~-~i~v~~v~pg~v~T~~~~~~~  238 (248)
                      ||+|+++++++++.|+++ +||||+|+||+|+|++.....
T Consensus       162 sK~a~~~~~~~la~e~~~~gi~vn~v~PG~v~T~~~~~~~  201 (266)
T 3p19_A          162 TKFAVHAISENVREEVAASNVRVMTIAPSAVKTELLSHTT  201 (266)
T ss_dssp             HHHHHHHHHHHHHHHHGGGTCEEEEEEECSBSSSGGGGCS
T ss_pred             HHHHHHHHHHHHHHHhcccCcEEEEEeeCccccchhhccc
Confidence            999999999999999987 499999999999999987654

>3uf0_A Short-chain dehydrogenase/reductase SDR; gluconate, gluconate 5-dehydratase, NAD(P) dependent, enzyme initiative, EFI, oxidoreductase; HET: NAP; 2.00A {Beutenbergia cavernae} SCOP: c.2.1.0

Probab=100.00  E-value=1.1e-38  Score=270.48  Aligned_cols=192  Identities=30%  Similarity=0.447  Sum_probs=171.1

Q ss_pred             ccCCCCCEEEEcCCCChHHHHHHHHHHHcCCeEEEEeCCcchHHHHHHHHHhhCCCcEEEEEccCCCHHHHHHHHHHHHh
Q 044010           42 SEDVSGKVVIITGASSGIGEHLAYEYARRGACLALCARREKSLEEVADTAREIGSPDVITIRADVSKVDDCRSLVEETMN  121 (248)
Q Consensus        42 ~~~~~~k~~lVtGg~~gIG~aia~~l~~~G~~V~l~~r~~~~~~~~~~~l~~~~~~~v~~~~~D~~~~~~~~~~~~~~~~  121 (248)
                      ..+++||++|||||++|||+++|++|+++|++|++++|+ +..++..+++.+.+. ++.++.+|++|.++++++.+. .+
T Consensus        26 ~~~l~gk~~lVTGas~GIG~aia~~la~~G~~V~~~~r~-~~~~~~~~~~~~~~~-~~~~~~~Dv~d~~~v~~~~~~-~~  102 (273)
T 3uf0_A           26 PFSLAGRTAVVTGAGSGIGRAIAHGYARAGAHVLAWGRT-DGVKEVADEIADGGG-SAEAVVADLADLEGAANVAEE-LA  102 (273)
T ss_dssp             TTCCTTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESS-THHHHHHHHHHTTTC-EEEEEECCTTCHHHHHHHHHH-HH
T ss_pred             ccCCCCCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEcCH-HHHHHHHHHHHhcCC-cEEEEEecCCCHHHHHHHHHH-HH
Confidence            357899999999999999999999999999999999965 556667777766554 789999999999999999554 46


Q ss_pred             HcCCccEEEEccccCCcccccccCChHHHHHHHHhhhHHHHHHHHHHhhhhhhc-CCeEEEEcCccccccCCCCccchHH
Q 044010          122 HFGRLDHLVNNAGISSVALFEDIVNITDFKQIMNINFWGSVYTTRFAVPHLRYT-KGKIVVLSSAASWLTAPRMSFYNAS  200 (248)
Q Consensus       122 ~~g~id~vv~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~-~g~iV~isS~~~~~~~~~~~~Y~~s  200 (248)
                      ++|++|++|||||.....+..+ .+.++|++.+++|+.+++++++++.|.|.++ .|+||++||..+..+.++..+|++|
T Consensus       103 ~~g~iD~lv~nAg~~~~~~~~~-~~~~~~~~~~~vN~~g~~~l~~~~~~~m~~~~~g~IV~isS~~~~~~~~~~~~Y~as  181 (273)
T 3uf0_A          103 ATRRVDVLVNNAGIIARAPAEE-VSLGRWREVLTVNLDAAWVLSRSFGTAMLAHGSGRIVTIASMLSFQGGRNVAAYAAS  181 (273)
T ss_dssp             HHSCCCEEEECCCCCCCCCGGG-CCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEEECCGGGTSCCSSCHHHHHH
T ss_pred             hcCCCcEEEECCCCCCCCCchh-CCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcCCCEEEEEcchHhcCCCCCChhHHHH
Confidence            6799999999999987766665 5789999999999999999999999998754 4899999999999999999999999


Q ss_pred             HHHHHHHHHHHHHHhCCC-eEEEEEecCccccCccccc
Q 044010          201 KAALVLFFETLRVELGSD-VGVTIVTPGFIESELTQGK  237 (248)
Q Consensus       201 Kaal~~l~~~la~~~~~~-i~v~~v~pg~v~T~~~~~~  237 (248)
                      |+|+++|+++++.|+++. ||||+|+||+|+|++....
T Consensus       182 Kaa~~~l~~~la~e~~~~gI~vn~v~PG~v~T~~~~~~  219 (273)
T 3uf0_A          182 KHAVVGLTRALASEWAGRGVGVNALAPGYVVTANTAAL  219 (273)
T ss_dssp             HHHHHHHHHHHHHHHGGGTEEEEEEEECSBCSGGGHHH
T ss_pred             HHHHHHHHHHHHHHHhhcCcEEEEEEeCCCcCCchhhc
Confidence            999999999999999874 9999999999999997654

>3n74_A 3-ketoacyl-(acyl-carrier-protein) reductase; seattle structural genomics center for infectious disease, S brucellosis; 2.20A {Brucella melitensis biovar abortus}

Probab=100.00  E-value=1.2e-38  Score=267.97  Aligned_cols=193  Identities=32%  Similarity=0.493  Sum_probs=164.2

Q ss_pred             ccCCCCCEEEEcCCCChHHHHHHHHHHHcCCeEEEEeCCcchHHHHHHHHHhhCCCcEEEEEccCCCHHHHHHHHHHHHh
Q 044010           42 SEDVSGKVVIITGASSGIGEHLAYEYARRGACLALCARREKSLEEVADTAREIGSPDVITIRADVSKVDDCRSLVEETMN  121 (248)
Q Consensus        42 ~~~~~~k~~lVtGg~~gIG~aia~~l~~~G~~V~l~~r~~~~~~~~~~~l~~~~~~~v~~~~~D~~~~~~~~~~~~~~~~  121 (248)
                      .+++++|++|||||++|||+++|++|+++|++|++++|+.+++++..+++   + .++.++.+|++|.++++++++++.+
T Consensus         4 ~m~l~~k~vlITGas~gIG~~~a~~l~~~G~~V~~~~r~~~~~~~~~~~~---~-~~~~~~~~D~~~~~~~~~~~~~~~~   79 (261)
T 3n74_A            4 SMSLEGKVALITGAGSGFGEGMAKRFAKGGAKVVIVDRDKAGAERVAGEI---G-DAALAVAADISKEADVDAAVEAALS   79 (261)
T ss_dssp             -CTTTTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHH---C-TTEEEEECCTTSHHHHHHHHHHHHH
T ss_pred             cccCCCCEEEEECCCchHHHHHHHHHHHCCCEEEEEcCCHHHHHHHHHHh---C-CceEEEEecCCCHHHHHHHHHHHHH
Confidence            36789999999999999999999999999999999999998877766655   2 3789999999999999999999999


Q ss_pred             HcCCccEEEEccccCCcccccccCChHHHHHHHHhhhHHHHHHHHHHhhhhhhc-----CCeEEEEcCccccccCCCCcc
Q 044010          122 HFGRLDHLVNNAGISSVALFEDIVNITDFKQIMNINFWGSVYTTRFAVPHLRYT-----KGKIVVLSSAASWLTAPRMSF  196 (248)
Q Consensus       122 ~~g~id~vv~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~-----~g~iV~isS~~~~~~~~~~~~  196 (248)
                      ++|++|++|||||........+..+.++|++.+++|+.+++++++.+.|.|.++     .++||++||..+..+.+....
T Consensus        80 ~~g~id~li~~Ag~~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~~~~~~~~~iv~isS~~~~~~~~~~~~  159 (261)
T 3n74_A           80 KFGKVDILVNNAGIGHKPQNAELVEPEEFDRIVGVNVRGVYLMTSKLIPHFKENGAKGQECVILNVASTGAGRPRPNLAW  159 (261)
T ss_dssp             HHSCCCEEEECCCCCCCSCCGGGSCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHHHTTCCEEEEEECCTTTTSCCTTCHH
T ss_pred             hcCCCCEEEECCccCCCCCCcccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcCCCCCCeEEEEeCchhhcCCCCCccH
Confidence            999999999999987633333335789999999999999999999999998754     468999999999999999999


Q ss_pred             chHHHHHHHHHHHHHHHHhCC-CeEEEEEecCccccCcccccc
Q 044010          197 YNASKAALVLFFETLRVELGS-DVGVTIVTPGFIESELTQGKF  238 (248)
Q Consensus       197 Y~~sKaal~~l~~~la~~~~~-~i~v~~v~pg~v~T~~~~~~~  238 (248)
                      |++||+|+++++++++.|+++ +||||+|+||+++|++.+...
T Consensus       160 Y~asKaa~~~~~~~la~e~~~~gi~v~~v~PG~v~t~~~~~~~  202 (261)
T 3n74_A          160 YNATKGWVVSVTKALAIELAPAKIRVVALNPVAGETPLLTTFM  202 (261)
T ss_dssp             HHHHHHHHHHHHHHHHHHHGGGTEEEEEEEEC-----------
T ss_pred             HHHHHHHHHHHHHHHHHHhhhcCcEEEEEecCcccChhhhhhc
Confidence            999999999999999999987 499999999999999987654

>2ae2_A Protein (tropinone reductase-II); oxidoreductase, tropane alkaloid biosynthesis, reduction of tropinone to pseudotropine; HET: NAP PTO; 1.90A {Datura stramonium} SCOP: c.2.1.2 PDB: 2ae1_A* 1ipe_A* 1ipf_A*

Probab=100.00  E-value=1.7e-38  Score=267.22  Aligned_cols=192  Identities=32%  Similarity=0.469  Sum_probs=174.9

Q ss_pred             cCCCCCEEEEcCCCChHHHHHHHHHHHcCCeEEEEeCCcchHHHHHHHHHhhCCCcEEEEEccCCCHHHHHHHHHHHHhH
Q 044010           43 EDVSGKVVIITGASSGIGEHLAYEYARRGACLALCARREKSLEEVADTAREIGSPDVITIRADVSKVDDCRSLVEETMNH  122 (248)
Q Consensus        43 ~~~~~k~~lVtGg~~gIG~aia~~l~~~G~~V~l~~r~~~~~~~~~~~l~~~~~~~v~~~~~D~~~~~~~~~~~~~~~~~  122 (248)
                      +++++|++|||||++|||++++++|+++|++|++++|+.++.++..+++++.+ .++.++.+|++|.++++++++++.++
T Consensus         5 ~~l~~k~vlVTGas~giG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~-~~~~~~~~D~~~~~~~~~~~~~~~~~   83 (260)
T 2ae2_A            5 WNLEGCTALVTGGSRGIGYGIVEELASLGASVYTCSRNQKELNDCLTQWRSKG-FKVEASVCDLSSRSERQELMNTVANH   83 (260)
T ss_dssp             TCCTTCEEEEESCSSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHTT-CEEEEEECCTTCHHHHHHHHHHHHHH
T ss_pred             cCCCCCEEEEECCCcHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcC-CcEEEEEcCCCCHHHHHHHHHHHHHH
Confidence            46899999999999999999999999999999999999988888877777654 37889999999999999999999999


Q ss_pred             c-CCccEEEEccccCCcccccccCChHHHHHHHHhhhHHHHHHHHHHhhhhhhcC-CeEEEEcCccccccCCCCccchHH
Q 044010          123 F-GRLDHLVNNAGISSVALFEDIVNITDFKQIMNINFWGSVYTTRFAVPHLRYTK-GKIVVLSSAASWLTAPRMSFYNAS  200 (248)
Q Consensus       123 ~-g~id~vv~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~-g~iV~isS~~~~~~~~~~~~Y~~s  200 (248)
                      + +++|++|||||.....+..+ .+.++|++.+++|+.+++++++++.|.|++++ |+||++||..+..+.++...|++|
T Consensus        84 ~~g~id~lv~~Ag~~~~~~~~~-~~~~~~~~~~~~N~~g~~~~~~~~~~~~~~~~~g~iv~isS~~~~~~~~~~~~Y~~s  162 (260)
T 2ae2_A           84 FHGKLNILVNNAGIVIYKEAKD-YTVEDYSLIMSINFEAAYHLSVLAHPFLKASERGNVVFISSVSGALAVPYEAVYGAT  162 (260)
T ss_dssp             TTTCCCEEEECCCCCCCCCGGG-CCHHHHHHHHHHHTHHHHHHHHHHHHHHHHTSSEEEEEECCGGGTSCCTTCHHHHHH
T ss_pred             cCCCCCEEEECCCCCCCCChhh-CCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcCCcEEEEEcchhhccCCCCcchHHHH
Confidence            9 89999999999876655555 57899999999999999999999999997554 899999999999888999999999


Q ss_pred             HHHHHHHHHHHHHHhCC-CeEEEEEecCccccCcccc
Q 044010          201 KAALVLFFETLRVELGS-DVGVTIVTPGFIESELTQG  236 (248)
Q Consensus       201 Kaal~~l~~~la~~~~~-~i~v~~v~pg~v~T~~~~~  236 (248)
                      |+++++++++++.|+++ +||||+|+||+++|++...
T Consensus       163 K~a~~~~~~~la~e~~~~gi~v~~v~Pg~v~t~~~~~  199 (260)
T 2ae2_A          163 KGAMDQLTRCLAFEWAKDNIRVNGVGPGVIATSLVEM  199 (260)
T ss_dssp             HHHHHHHHHHHHHHTGGGTEEEEEEEECSBCSHHHHH
T ss_pred             HHHHHHHHHHHHHHHhhcCcEEEEEecCCCCCcchhh
Confidence            99999999999999987 5999999999999998654

>3k31_A Enoyl-(acyl-carrier-protein) reductase; ssgcid, NIH, niaid, SBRI, UW, decode, eonyl-(acyl-carrier-PR reductase, NAD, oxidoreductase; HET: NAD; 1.80A {Anaplasma phagocytophilum} PDB: 3k2e_A*

Probab=100.00  E-value=2.2e-38  Score=271.58  Aligned_cols=192  Identities=23%  Similarity=0.325  Sum_probs=171.3

Q ss_pred             cCCCCCEEEEcCCCC--hHHHHHHHHHHHcCCeEEEEeCCcchHHHHHHHHHhhCCCcEEEEEccCCCHHHHHHHHHHHH
Q 044010           43 EDVSGKVVIITGASS--GIGEHLAYEYARRGACLALCARREKSLEEVADTAREIGSPDVITIRADVSKVDDCRSLVEETM  120 (248)
Q Consensus        43 ~~~~~k~~lVtGg~~--gIG~aia~~l~~~G~~V~l~~r~~~~~~~~~~~l~~~~~~~v~~~~~D~~~~~~~~~~~~~~~  120 (248)
                      ++++||++|||||++  |||+++|++|+++|++|++++|+.+..+...+..++.+  .+.++.+|++|.++++++++++.
T Consensus        26 ~~l~~k~vlVTGasg~~GIG~~ia~~la~~G~~V~~~~r~~~~~~~~~~~~~~~~--~~~~~~~Dv~d~~~v~~~~~~~~  103 (296)
T 3k31_A           26 MLMEGKKGVIIGVANDKSLAWGIAKAVCAQGAEVALTYLSETFKKRVDPLAESLG--VKLTVPCDVSDAESVDNMFKVLA  103 (296)
T ss_dssp             CTTTTCEEEEECCCSTTSHHHHHHHHHHHTTCEEEEEESSGGGHHHHHHHHHHHT--CCEEEECCTTCHHHHHHHHHHHH
T ss_pred             hccCCCEEEEEeCCCCCCHHHHHHHHHHHCCCEEEEEeCChHHHHHHHHHHHhcC--CeEEEEcCCCCHHHHHHHHHHHH
Confidence            468899999999996  99999999999999999999999766555554444444  46889999999999999999999


Q ss_pred             hHcCCccEEEEccccCCc----ccccccCChHHHHHHHHhhhHHHHHHHHHHhhhhhhcCCeEEEEcCccccccCCCCcc
Q 044010          121 NHFGRLDHLVNNAGISSV----ALFEDIVNITDFKQIMNINFWGSVYTTRFAVPHLRYTKGKIVVLSSAASWLTAPRMSF  196 (248)
Q Consensus       121 ~~~g~id~vv~~ag~~~~----~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~g~iV~isS~~~~~~~~~~~~  196 (248)
                      +++|++|++|||||....    .++.+ .+.++|++.+++|+.+++.+++.+.|.|++ +|+||++||..+..+.+++..
T Consensus       104 ~~~g~iD~lVnnAG~~~~~~~~~~~~~-~~~~~~~~~~~vN~~g~~~l~~~~~~~m~~-~g~IV~isS~~~~~~~~~~~~  181 (296)
T 3k31_A          104 EEWGSLDFVVHAVAFSDKNELKGRYVD-TSLGNFLTSMHISCYSFTYIASKAEPLMTN-GGSILTLSYYGAEKVVPHYNV  181 (296)
T ss_dssp             HHHSCCSEEEECCCCCCHHHHTSCGGG-CCHHHHHHHHHHHTHHHHHHHHHHGGGCTT-CEEEEEEECGGGTSCCTTTTH
T ss_pred             HHcCCCCEEEECCCcCCcccccCChhh-CCHHHHHHHHHHHHHHHHHHHHHHHHHhhc-CCEEEEEEehhhccCCCCchh
Confidence            999999999999998764    44444 578999999999999999999999999974 789999999999999999999


Q ss_pred             chHHHHHHHHHHHHHHHHhCCC-eEEEEEecCccccCcccccc
Q 044010          197 YNASKAALVLFFETLRVELGSD-VGVTIVTPGFIESELTQGKF  238 (248)
Q Consensus       197 Y~~sKaal~~l~~~la~~~~~~-i~v~~v~pg~v~T~~~~~~~  238 (248)
                      |++||+|+++|+++++.|+++. ||||+|+||+|+|++.....
T Consensus       182 Y~asKaal~~l~~~la~e~~~~gIrvn~v~PG~v~T~~~~~~~  224 (296)
T 3k31_A          182 MGVCKAALEASVKYLAVDLGKQQIRVNAISAGPVRTLASSGIS  224 (296)
T ss_dssp             HHHHHHHHHHHHHHHHHHHHTTTEEEEEEEECCCCCSSCCSCH
T ss_pred             hHHHHHHHHHHHHHHHHHHhhcCcEEEEEEECCCcCchhhccc
Confidence            9999999999999999999874 99999999999999987543

>3r3s_A Oxidoreductase; structural genomics, csgid, center for structural genomics O infectious diseases, 3-layer(ABA) sandwich, rossmann fold; HET: NAD; 1.25A {Salmonella enterica subsp}

Probab=100.00  E-value=1.5e-38  Score=272.33  Aligned_cols=190  Identities=27%  Similarity=0.388  Sum_probs=169.0

Q ss_pred             cCCCCCEEEEcCCCChHHHHHHHHHHHcCCeEEEEeCCc--chHHHHHHHHHhhCCCcEEEEEccCCCHHHHHHHHHHHH
Q 044010           43 EDVSGKVVIITGASSGIGEHLAYEYARRGACLALCARRE--KSLEEVADTAREIGSPDVITIRADVSKVDDCRSLVEETM  120 (248)
Q Consensus        43 ~~~~~k~~lVtGg~~gIG~aia~~l~~~G~~V~l~~r~~--~~~~~~~~~l~~~~~~~v~~~~~D~~~~~~~~~~~~~~~  120 (248)
                      .+++||++|||||++|||+++|++|+++|++|++++|+.  +..++..+.+++.+ .++.++.+|++|.++++++++++.
T Consensus        45 ~~l~~k~vlVTGas~GIG~aia~~la~~G~~V~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~Dv~d~~~v~~~~~~~~  123 (294)
T 3r3s_A           45 GRLKDRKALVTGGDSGIGRAAAIAYAREGADVAINYLPAEEEDAQQVKALIEECG-RKAVLLPGDLSDESFARSLVHKAR  123 (294)
T ss_dssp             STTTTCEEEEETTTSHHHHHHHHHHHHTTCEEEEECCGGGHHHHHHHHHHHHHTT-CCEEECCCCTTSHHHHHHHHHHHH
T ss_pred             cCCCCCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEeCCcchhHHHHHHHHHHHcC-CcEEEEEecCCCHHHHHHHHHHHH
Confidence            468999999999999999999999999999999999873  34455555555554 478999999999999999999999


Q ss_pred             hHcCCccEEEEccccCCcccccccCChHHHHHHHHhhhHHHHHHHHHHhhhhhhcCCeEEEEcCccccccCCCCccchHH
Q 044010          121 NHFGRLDHLVNNAGISSVALFEDIVNITDFKQIMNINFWGSVYTTRFAVPHLRYTKGKIVVLSSAASWLTAPRMSFYNAS  200 (248)
Q Consensus       121 ~~~g~id~vv~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~g~iV~isS~~~~~~~~~~~~Y~~s  200 (248)
                      +++|++|++|||||.........+.+.++|++.+++|+.+++++++++.|.|. ++|+||++||..+..+.++...|++|
T Consensus       124 ~~~g~iD~lv~nAg~~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~~~-~~g~Iv~isS~~~~~~~~~~~~Y~as  202 (294)
T 3r3s_A          124 EALGGLDILALVAGKQTAIPEIKDLTSEQFQQTFAVNVFALFWITQEAIPLLP-KGASIITTSSIQAYQPSPHLLDYAAT  202 (294)
T ss_dssp             HHHTCCCEEEECCCCCCCCSSGGGCCHHHHHHHHHHHTHHHHHHHHHHGGGCC-TTCEEEEECCGGGTSCCTTCHHHHHH
T ss_pred             HHcCCCCEEEECCCCcCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHhh-cCCEEEEECChhhccCCCCchHHHHH
Confidence            99999999999999865433333368899999999999999999999999986 46899999999999999999999999


Q ss_pred             HHHHHHHHHHHHHHhCC-CeEEEEEecCccccCcc
Q 044010          201 KAALVLFFETLRVELGS-DVGVTIVTPGFIESELT  234 (248)
Q Consensus       201 Kaal~~l~~~la~~~~~-~i~v~~v~pg~v~T~~~  234 (248)
                      |+|+++|+++++.|+++ +||||+|+||+|+|++.
T Consensus       203 Kaa~~~l~~~la~e~~~~gI~vn~v~PG~v~t~~~  237 (294)
T 3r3s_A          203 KAAILNYSRGLAKQVAEKGIRVNIVAPGPIWTALQ  237 (294)
T ss_dssp             HHHHHHHHHHHHHHHGGGTCEEEEEEECSBCSHHH
T ss_pred             HHHHHHHHHHHHHHHhhcCeEEEEEecCcCccccc
Confidence            99999999999999987 49999999999999984

>3l77_A Short-chain alcohol dehydrogenase; oxidoreductase; HET: NJP PG4; 1.60A {Thermococcus sibiricus} SCOP: c.2.1.0 PDB: 3tn7_A*

Probab=100.00  E-value=2.5e-38  Score=262.04  Aligned_cols=192  Identities=30%  Similarity=0.392  Sum_probs=173.7

Q ss_pred             CCCEEEEcCCCChHHHHHHHHHHHcCCeEEEEeCCcchHHHHHHHHHhhCCCcEEEEEccCCCHHHHHHHHHHHHhHcCC
Q 044010           46 SGKVVIITGASSGIGEHLAYEYARRGACLALCARREKSLEEVADTAREIGSPDVITIRADVSKVDDCRSLVEETMNHFGR  125 (248)
Q Consensus        46 ~~k~~lVtGg~~gIG~aia~~l~~~G~~V~l~~r~~~~~~~~~~~l~~~~~~~v~~~~~D~~~~~~~~~~~~~~~~~~g~  125 (248)
                      ++|++|||||++|||+++|++|+++|++|++++|+.++.++..+++.+..+.++.++.+|++|.++++++++++.+++|+
T Consensus         1 ~~k~vlITGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~v~~~~~~~~~~~g~   80 (235)
T 3l77_A            1 EMKVAVITGASRGIGEAIARALARDGYALALGARSVDRLEKIAHELMQEQGVEVFYHHLDVSKAESVEEFSKKVLERFGD   80 (235)
T ss_dssp             CCCEEEEESCSSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHHHCCCEEEEECCTTCHHHHHHHCC-HHHHHSS
T ss_pred             CCCEEEEECCCcHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhhcCCeEEEEEeccCCHHHHHHHHHHHHHhcCC
Confidence            47899999999999999999999999999999999999888888887544558999999999999999999999999999


Q ss_pred             ccEEEEccccCCcccccccCChHHHHHHHHhhhHHHHHHHHHHhhhhhhcCCeEEEEcCccccccCCCCccchHHHHHHH
Q 044010          126 LDHLVNNAGISSVALFEDIVNITDFKQIMNINFWGSVYTTRFAVPHLRYTKGKIVVLSSAASWLTAPRMSFYNASKAALV  205 (248)
Q Consensus       126 id~vv~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~g~iV~isS~~~~~~~~~~~~Y~~sKaal~  205 (248)
                      +|++|||||.....++.+ .+.++|++.+++|+.+++.++++++|.|++.++++|++||..+..+.+....|++||++++
T Consensus        81 id~li~~Ag~~~~~~~~~-~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~~~~ii~~sS~~~~~~~~~~~~Y~~sKaa~~  159 (235)
T 3l77_A           81 VDVVVANAGLGYFKRLEE-LSEEEFHEMIEVNLLGVWRTLKAFLDSLKRTGGLALVTTSDVSARLIPYGGGYVSTKWAAR  159 (235)
T ss_dssp             CSEEEECCCCCCCCCTTT-SCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEECCGGGSSCCTTCHHHHHHHHHHH
T ss_pred             CCEEEECCccccccCccc-CCHHHHHHHHHHHHHHHHHHHHHHHHHHhhcCCcEEEEecchhcccCCCcchHHHHHHHHH
Confidence            999999999887666655 5789999999999999999999999999777899999999999999899999999999999


Q ss_pred             HHHHHHHHHhCCCeEEEEEecCccccCccccccc
Q 044010          206 LFFETLRVELGSDVGVTIVTPGFIESELTQGKFL  239 (248)
Q Consensus       206 ~l~~~la~~~~~~i~v~~v~pg~v~T~~~~~~~~  239 (248)
                      +++++++.+ .++||||+|+||+++|+|......
T Consensus       160 ~~~~~l~~~-~~~i~v~~v~PG~v~T~~~~~~~~  192 (235)
T 3l77_A          160 ALVRTFQIE-NPDVRFFELRPGAVDTYFGGSKPG  192 (235)
T ss_dssp             HHHHHHHHH-CTTSEEEEEEECSBSSSTTTCCSC
T ss_pred             HHHHHHhhc-CCCeEEEEEeCCccccccccccCC
Confidence            999999655 346999999999999999876543

>1xkq_A Short-chain reductase family member (5D234); parrallel beta-sheet of seven strands in the order 3214567; HET: NDP; 2.10A {Caenorhabditis elegans} SCOP: c.2.1.2

Probab=100.00  E-value=2.3e-38  Score=269.14  Aligned_cols=193  Identities=32%  Similarity=0.490  Sum_probs=174.2

Q ss_pred             CCCCCEEEEcCCCChHHHHHHHHHHHcCCeEEEEeCCcchHHHHHHHHHhhCCC--cEEEEEccCCCHHHHHHHHHHHHh
Q 044010           44 DVSGKVVIITGASSGIGEHLAYEYARRGACLALCARREKSLEEVADTAREIGSP--DVITIRADVSKVDDCRSLVEETMN  121 (248)
Q Consensus        44 ~~~~k~~lVtGg~~gIG~aia~~l~~~G~~V~l~~r~~~~~~~~~~~l~~~~~~--~v~~~~~D~~~~~~~~~~~~~~~~  121 (248)
                      ++++|++|||||++|||+++|++|+++|++|++++|+.++.++..+++++.+..  ++.++.+|++|.++++++++++.+
T Consensus         3 ~l~~k~vlVTGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~   82 (280)
T 1xkq_A            3 RFSNKTVIITGSSNGIGRTTAILFAQEGANVTITGRSSERLEETRQIILKSGVSEKQVNSVVADVTTEDGQDQIINSTLK   82 (280)
T ss_dssp             TTTTCEEEETTCSSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHTTTCCGGGEEEEECCTTSHHHHHHHHHHHHH
T ss_pred             CCCCCEEEEECCCChHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHHcCCCCcceEEEEecCCCHHHHHHHHHHHHH
Confidence            588999999999999999999999999999999999998888887777654421  688999999999999999999999


Q ss_pred             HcCCccEEEEccccCCccc----ccccCChHHHHHHHHhhhHHHHHHHHHHhhhhhhcCCeEEEEcCccccccC-CCCcc
Q 044010          122 HFGRLDHLVNNAGISSVAL----FEDIVNITDFKQIMNINFWGSVYTTRFAVPHLRYTKGKIVVLSSAASWLTA-PRMSF  196 (248)
Q Consensus       122 ~~g~id~vv~~ag~~~~~~----~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~g~iV~isS~~~~~~~-~~~~~  196 (248)
                      ++|++|++|||||.....+    ..+ .+.++|++.+++|+.+++.+++.+.|.|.+++|+||++||..+..+. ++...
T Consensus        83 ~~g~iD~lv~nAg~~~~~~~~~~~~~-~~~~~~~~~~~~N~~g~~~~~~~~~~~~~~~~g~iv~isS~~~~~~~~~~~~~  161 (280)
T 1xkq_A           83 QFGKIDVLVNNAGAAIPDAFGTTGTD-QGIDIYHKTLKLNLQAVIEMTKKVKPHLVASKGEIVNVSSIVAGPQAQPDFLY  161 (280)
T ss_dssp             HHSCCCEEEECCCCCCCCTTCCCGGG-SCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEECCGGGSSSCCCSSHH
T ss_pred             hcCCCCEEEECCCCCCCCCCCccccc-CCHHHHHHHHHHhhHHHHHHHHHHHHHhhcCCCcEEEecCccccCCCCCcccH
Confidence            9999999999999876554    344 57899999999999999999999999997666999999999998887 88899


Q ss_pred             chHHHHHHHHHHHHHHHHhCC-CeEEEEEecCccccCccccc
Q 044010          197 YNASKAALVLFFETLRVELGS-DVGVTIVTPGFIESELTQGK  237 (248)
Q Consensus       197 Y~~sKaal~~l~~~la~~~~~-~i~v~~v~pg~v~T~~~~~~  237 (248)
                      |++||+++++++++++.|+++ +||||+|+||+++|++....
T Consensus       162 Y~asK~a~~~~~~~la~e~~~~gi~v~~v~PG~v~t~~~~~~  203 (280)
T 1xkq_A          162 YAIAKAALDQYTRSTAIDLAKFGIRVNSVSPGMVETGFTNAM  203 (280)
T ss_dssp             HHHHHHHHHHHHHHHHHHHHTTTCEEEEEEECCBCSSHHHHT
T ss_pred             HHHHHHHHHHHHHHHHHHhccCCeEEEEEeeCcCcCCccccc
Confidence            999999999999999999977 59999999999999987653

>1xhl_A Short-chain dehydrogenase/reductase family member putative tropinone reductase-II...; parallel beta-sheet of seven strands in the order 3214567; HET: NDP TNE; 2.40A {Caenorhabditis elegans} SCOP: c.2.1.2

Probab=100.00  E-value=2.5e-38  Score=271.35  Aligned_cols=194  Identities=31%  Similarity=0.458  Sum_probs=175.0

Q ss_pred             cCCCCCEEEEcCCCChHHHHHHHHHHHcCCeEEEEeCCcchHHHHHHHHHhhCCC--cEEEEEccCCCHHHHHHHHHHHH
Q 044010           43 EDVSGKVVIITGASSGIGEHLAYEYARRGACLALCARREKSLEEVADTAREIGSP--DVITIRADVSKVDDCRSLVEETM  120 (248)
Q Consensus        43 ~~~~~k~~lVtGg~~gIG~aia~~l~~~G~~V~l~~r~~~~~~~~~~~l~~~~~~--~v~~~~~D~~~~~~~~~~~~~~~  120 (248)
                      +++++|++|||||++|||+++|++|+++|++|++++|+.++.++..+++.+.+..  ++.++.+|++|.++++++++++.
T Consensus        22 ~~l~~k~vlVTGas~gIG~aia~~L~~~G~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~~Dv~d~~~v~~~~~~~~  101 (297)
T 1xhl_A           22 ARFSGKSVIITGSSNGIGRSAAVIFAKEGAQVTITGRNEDRLEETKQQILKAGVPAEKINAVVADVTEASGQDDIINTTL  101 (297)
T ss_dssp             -CCTTCEEEETTCSSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHTTCCGGGEEEEECCTTSHHHHHHHHHHHH
T ss_pred             cCCCCCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcCCCCceEEEEecCCCCHHHHHHHHHHHH
Confidence            4689999999999999999999999999999999999998888888877665421  68899999999999999999999


Q ss_pred             hHcCCccEEEEccccCCccc--ccccCChHHHHHHHHhhhHHHHHHHHHHhhhhhhcCCeEEEEcCccccccC-CCCccc
Q 044010          121 NHFGRLDHLVNNAGISSVAL--FEDIVNITDFKQIMNINFWGSVYTTRFAVPHLRYTKGKIVVLSSAASWLTA-PRMSFY  197 (248)
Q Consensus       121 ~~~g~id~vv~~ag~~~~~~--~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~g~iV~isS~~~~~~~-~~~~~Y  197 (248)
                      +++|++|++|||||.....+  +.+ .+.++|++.+++|+.+++.+++.+.|.|.+++|+||++||..+..+. ++...|
T Consensus       102 ~~~g~iD~lvnnAG~~~~~~~~~~~-~~~~~~~~~~~vN~~g~~~l~~~~~~~~~~~~g~IV~isS~~~~~~~~~~~~~Y  180 (297)
T 1xhl_A          102 AKFGKIDILVNNAGANLADGTANTD-QPVELYQKTFKLNFQAVIEMTQKTKEHLIKTKGEIVNVSSIVAGPQAHSGYPYY  180 (297)
T ss_dssp             HHHSCCCEEEECCCCCCCCSCCGGG-SCHHHHHHHHHHHTHHHHHHHHHHHHHHHHTTCEEEEECCGGGSSSCCTTSHHH
T ss_pred             HhcCCCCEEEECCCcCcCCCCcccc-CCHHHHHHHHhHhhHHHHHHHHHHHHHHHhcCCEEEEEcCchhccCCCCCcchH
Confidence            99999999999999876554  444 57899999999999999999999999997666999999999998887 888999


Q ss_pred             hHHHHHHHHHHHHHHHHhCC-CeEEEEEecCccccCccccc
Q 044010          198 NASKAALVLFFETLRVELGS-DVGVTIVTPGFIESELTQGK  237 (248)
Q Consensus       198 ~~sKaal~~l~~~la~~~~~-~i~v~~v~pg~v~T~~~~~~  237 (248)
                      ++||+++++++++++.|+++ +||||+|+||+++|++....
T Consensus       181 ~asKaa~~~l~~~la~el~~~gI~v~~v~PG~v~T~~~~~~  221 (297)
T 1xhl_A          181 ACAKAALDQYTRCTAIDLIQHGVRVNSVSPGAVATGFMGAM  221 (297)
T ss_dssp             HHHHHHHHHHHHHHHHHHGGGTCEEEEEEECCBCSSHHHHT
T ss_pred             HHHHHHHHHHHHHHHHHhcccCeEEEEEeeCCCcCcccccc
Confidence            99999999999999999987 59999999999999997654

>1e7w_A Pteridine reductase; dihydrofolate reductase, shortchain dehydrogenase, methotrexate resistance, oxidoreductase; HET: NDP MTX; 1.75A {Leishmania major} SCOP: c.2.1.2 PDB: 1w0c_A* 1e92_A* 2bf7_A* 2bfa_A* 2bfm_A* 2bfo_A* 2bfp_A* 2p8k_A* 3h4v_A* 2xox_A 1p33_A*

Probab=100.00  E-value=1.8e-38  Score=271.41  Aligned_cols=190  Identities=23%  Similarity=0.256  Sum_probs=170.4

Q ss_pred             cCCCCCEEEEcCCCChHHHHHHHHHHHcCCeEEEEe-CCcchHHHHHHHHHhhCCCcEEEEEccCCCHH-----------
Q 044010           43 EDVSGKVVIITGASSGIGEHLAYEYARRGACLALCA-RREKSLEEVADTAREIGSPDVITIRADVSKVD-----------  110 (248)
Q Consensus        43 ~~~~~k~~lVtGg~~gIG~aia~~l~~~G~~V~l~~-r~~~~~~~~~~~l~~~~~~~v~~~~~D~~~~~-----------  110 (248)
                      .++++|++|||||++|||+++|++|+++|++|++++ |+.++.++..+++++..+.++.++.+|++|.+           
T Consensus         5 ~~l~~k~~lVTGas~GIG~aia~~la~~G~~V~~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~   84 (291)
T 1e7w_A            5 TAPTVPVALVTGAAKRLGRSIAEGLHAEGYAVCLHYHRSAAEANALSATLNARRPNSAITVQADLSNVATAPVSGADGSA   84 (291)
T ss_dssp             ---CCCEEEETTCSSHHHHHHHHHHHHTTCEEEEEESSCHHHHHHHHHHHHHHSTTCEEEEECCCSSSCBCCCC----CC
T ss_pred             cCCCCCEEEEECCCchHHHHHHHHHHHCCCeEEEEcCCCHHHHHHHHHHHhhhcCCeeEEEEeecCCccccccccccccc
Confidence            368999999999999999999999999999999999 99888888888886333457899999999999           


Q ss_pred             ------HHHHHHHHHHhHcCCccEEEEccccCCcccccccCC--------------hHHHHHHHHhhhHHHHHHHHHHhh
Q 044010          111 ------DCRSLVEETMNHFGRLDHLVNNAGISSVALFEDIVN--------------ITDFKQIMNINFWGSVYTTRFAVP  170 (248)
Q Consensus       111 ------~~~~~~~~~~~~~g~id~vv~~ag~~~~~~~~~~~~--------------~~~~~~~~~~n~~~~~~l~~~~~~  170 (248)
                            +++++++++.+++|++|++|||||.....++.+ .+              .++|++.+++|+.+++.+++++.|
T Consensus        85 ~~~~~~~v~~~~~~~~~~~g~iD~lvnnAg~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~  163 (291)
T 1e7w_A           85 PVTLFTRCAELVAACYTHWGRCDVLVNNASSFYPTPLLR-NDEDGHEPCVGDREAMETATADLFGSNAIAPYFLIKAFAH  163 (291)
T ss_dssp             CBCHHHHHHHHHHHHHHHHSCCCEEEECCCCCCCCCCCC--------------HHHHHHHHHHHHHHTHHHHHHHHHHHH
T ss_pred             ccchHHHHHHHHHHHHHhcCCCCEEEECCCCCCCCChhh-cCccccccccccccccHHHHHHHHHHHhHHHHHHHHHHHH
Confidence                  999999999999999999999999876655544 45              789999999999999999999999


Q ss_pred             hhhhc-------CCeEEEEcCccccccCCCCccchHHHHHHHHHHHHHHHHhCC-CeEEEEEecCccccCc
Q 044010          171 HLRYT-------KGKIVVLSSAASWLTAPRMSFYNASKAALVLFFETLRVELGS-DVGVTIVTPGFIESEL  233 (248)
Q Consensus       171 ~~~~~-------~g~iV~isS~~~~~~~~~~~~Y~~sKaal~~l~~~la~~~~~-~i~v~~v~pg~v~T~~  233 (248)
                      .|.++       .|+||++||..+..+.++...|++||+++++|+++++.|+++ +||||+|+||+++|+|
T Consensus       164 ~m~~~~~~~~~~~g~Iv~isS~~~~~~~~~~~~Y~asKaa~~~l~~~la~e~~~~gI~vn~v~PG~v~T~~  234 (291)
T 1e7w_A          164 RVAGTPAKHRGTNYSIINMVDAMTNQPLLGYTIYTMAKGALEGLTRSAALELAPLQIRVNGVGPGLSVLVD  234 (291)
T ss_dssp             HHHTSCGGGSCSCEEEEEECCTTTTSCCTTCHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEESSBCCGG
T ss_pred             HHHhcCCCCCCCCcEEEEEechhhcCCCCCCchhHHHHHHHHHHHHHHHHHHHhcCeEEEEEeeCCccCCc
Confidence            99754       489999999999999999999999999999999999999987 4999999999999999

>2zat_A Dehydrogenase/reductase SDR family member 4; alpha/beta, oxidoreductase; HET: NAP; 1.50A {Sus scrofa} PDB: 3o4r_A*

Probab=100.00  E-value=3.8e-38  Score=264.91  Aligned_cols=192  Identities=27%  Similarity=0.457  Sum_probs=173.9

Q ss_pred             cCCCCCEEEEcCCCChHHHHHHHHHHHcCCeEEEEeCCcchHHHHHHHHHhhCCCcEEEEEccCCCHHHHHHHHHHHHhH
Q 044010           43 EDVSGKVVIITGASSGIGEHLAYEYARRGACLALCARREKSLEEVADTAREIGSPDVITIRADVSKVDDCRSLVEETMNH  122 (248)
Q Consensus        43 ~~~~~k~~lVtGg~~gIG~aia~~l~~~G~~V~l~~r~~~~~~~~~~~l~~~~~~~v~~~~~D~~~~~~~~~~~~~~~~~  122 (248)
                      .++++|++|||||++|||++++++|+++|++|++++|+.++.++..+++++.+. ++.++.+|++|.++++++++++.++
T Consensus        10 ~~l~~k~vlVTGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~l~~~~~-~~~~~~~D~~~~~~~~~~~~~~~~~   88 (260)
T 2zat_A           10 KPLENKVALVTASTDGIGLAIARRLAQDGAHVVVSSRKQENVDRTVATLQGEGL-SVTGTVCHVGKAEDRERLVAMAVNL   88 (260)
T ss_dssp             CTTTTCEEEESSCSSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHTTC-CEEEEECCTTCHHHHHHHHHHHHHH
T ss_pred             cCCCCCEEEEECCCcHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcCC-ceEEEEccCCCHHHHHHHHHHHHHH
Confidence            468999999999999999999999999999999999999888887777776553 7889999999999999999999999


Q ss_pred             cCCccEEEEccccCCc-ccccccCChHHHHHHHHhhhHHHHHHHHHHhhhhhhc-CCeEEEEcCccccccCCCCccchHH
Q 044010          123 FGRLDHLVNNAGISSV-ALFEDIVNITDFKQIMNINFWGSVYTTRFAVPHLRYT-KGKIVVLSSAASWLTAPRMSFYNAS  200 (248)
Q Consensus       123 ~g~id~vv~~ag~~~~-~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~-~g~iV~isS~~~~~~~~~~~~Y~~s  200 (248)
                      +|++|++|||||.... .++.+ .+.++|++.+++|+.+++++++++.|.|+++ .|+||++||..+..+.++..+|++|
T Consensus        89 ~g~iD~lv~~Ag~~~~~~~~~~-~~~~~~~~~~~~N~~~~~~~~~~~~~~~~~~~~g~iv~isS~~~~~~~~~~~~Y~~s  167 (260)
T 2zat_A           89 HGGVDILVSNAAVNPFFGNIID-ATEEVWDKILHVNVKATVLMTKAVVPEMEKRGGGSVLIVSSVGAYHPFPNLGPYNVS  167 (260)
T ss_dssp             HSCCCEEEECCCCCCCCBCGGG-CCHHHHHHHHHHHTHHHHHHHHHHHHHHHHTTCEEEEEECCGGGTSCCTTBHHHHHH
T ss_pred             cCCCCEEEECCCCCCCCCCccc-CCHHHHHHHHHHHhHHHHHHHHHHHHHHHHcCCCEEEEEechhhcCCCCCchhHHHH
Confidence            9999999999998643 33444 5789999999999999999999999999755 4899999999999998999999999


Q ss_pred             HHHHHHHHHHHHHHhCC-CeEEEEEecCccccCcccc
Q 044010          201 KAALVLFFETLRVELGS-DVGVTIVTPGFIESELTQG  236 (248)
Q Consensus       201 Kaal~~l~~~la~~~~~-~i~v~~v~pg~v~T~~~~~  236 (248)
                      |+++++++++++.|+++ +||||+|+||+++|++...
T Consensus       168 K~a~~~~~~~la~e~~~~gi~v~~v~Pg~v~t~~~~~  204 (260)
T 2zat_A          168 KTALLGLTKNLAVELAPRNIRVNCLAPGLIKTNFSQV  204 (260)
T ss_dssp             HHHHHHHHHHHHHHHGGGTEEEEEEEECSBCSSTTHH
T ss_pred             HHHHHHHHHHHHHHhcccCeEEEEEEECcccCccchh
Confidence            99999999999999987 4999999999999998764

>3a28_C L-2.3-butanediol dehydrogenase; chiral substrate recognition, oxidoreductase; HET: NAD; 2.00A {Brevibacterium saccharolyticum}

Probab=100.00  E-value=1.8e-38  Score=266.69  Aligned_cols=189  Identities=24%  Similarity=0.356  Sum_probs=171.2

Q ss_pred             CCCEEEEcCCCChHHHHHHHHHHHcCCeEEEEeCCcch--HHHHHHHHHhhCCCcEEEEEccCCCHHHHHHHHHHHHhHc
Q 044010           46 SGKVVIITGASSGIGEHLAYEYARRGACLALCARREKS--LEEVADTAREIGSPDVITIRADVSKVDDCRSLVEETMNHF  123 (248)
Q Consensus        46 ~~k~~lVtGg~~gIG~aia~~l~~~G~~V~l~~r~~~~--~~~~~~~l~~~~~~~v~~~~~D~~~~~~~~~~~~~~~~~~  123 (248)
                      ++|++|||||++|||++++++|+++|++|++++|+.++  .++..+++++.+ .++.++.+|++|.++++++++++.+++
T Consensus         1 ~~k~vlVTGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~-~~~~~~~~Dv~~~~~v~~~~~~~~~~~   79 (258)
T 3a28_C            1 MSKVAMVTGGAQGIGRGISEKLAADGFDIAVADLPQQEEQAAETIKLIEAAD-QKAVFVGLDVTDKANFDSAIDEAAEKL   79 (258)
T ss_dssp             -CCEEEEETTTSHHHHHHHHHHHHHTCEEEEEECGGGHHHHHHHHHHHHTTT-CCEEEEECCTTCHHHHHHHHHHHHHHH
T ss_pred             CCCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEeCCcchHHHHHHHHHHHhcC-CcEEEEEccCCCHHHHHHHHHHHHHHh
Confidence            37899999999999999999999999999999999877  777777776554 378899999999999999999999999


Q ss_pred             CCccEEEEccccCCcccccccCChHHHHHHHHhhhHHHHHHHHHHhhhhhhc-C-CeEEEEcCccccccCCCCccchHHH
Q 044010          124 GRLDHLVNNAGISSVALFEDIVNITDFKQIMNINFWGSVYTTRFAVPHLRYT-K-GKIVVLSSAASWLTAPRMSFYNASK  201 (248)
Q Consensus       124 g~id~vv~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~-~-g~iV~isS~~~~~~~~~~~~Y~~sK  201 (248)
                      |++|++|||||.....++.+ .+.++|++.+++|+.+++++++.+.|.|.++ . |+||++||..+..+.++..+|++||
T Consensus        80 g~iD~lv~nAg~~~~~~~~~-~~~~~~~~~~~~N~~g~~~~~~~~~~~~~~~~~~g~iv~isS~~~~~~~~~~~~Y~~sK  158 (258)
T 3a28_C           80 GGFDVLVNNAGIAQIKPLLE-VTEEDLKQIYSVNVFSVFFGIQAASRKFDELGVKGKIINAASIAAIQGFPILSAYSTTK  158 (258)
T ss_dssp             TCCCEEEECCCCCCCCCGGG-CCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCCCEEEEECCGGGTSCCTTCHHHHHHH
T ss_pred             CCCCEEEECCCCCCCCChhh-CCHHHHHHHHHhccHHHHHHHHHHHHHHHhcCCCcEEEEECcchhccCCCCchhHHHHH
Confidence            99999999999876665555 5789999999999999999999999998754 3 8999999999999989999999999


Q ss_pred             HHHHHHHHHHHHHhCC-CeEEEEEecCccccCcccc
Q 044010          202 AALVLFFETLRVELGS-DVGVTIVTPGFIESELTQG  236 (248)
Q Consensus       202 aal~~l~~~la~~~~~-~i~v~~v~pg~v~T~~~~~  236 (248)
                      +++++++++++.|+++ +||||+|+||+++|+|...
T Consensus       159 ~a~~~~~~~la~e~~~~gi~vn~v~PG~v~t~~~~~  194 (258)
T 3a28_C          159 FAVRGLTQAAAQELAPKGHTVNAYAPGIVGTGMWEQ  194 (258)
T ss_dssp             HHHHHHHHHHHHHHGGGTCEEEEEEECCBCSHHHHH
T ss_pred             HHHHHHHHHHHHHHHhhCeEEEEEECCccCChhhhh
Confidence            9999999999999987 4999999999999998764

>2z1n_A Dehydrogenase; reductase, SDR, oxidoreductase; 1.80A {Aeropyrum pernix}

Probab=100.00  E-value=2.3e-38  Score=266.32  Aligned_cols=191  Identities=25%  Similarity=0.341  Sum_probs=173.4

Q ss_pred             cCCCCCEEEEcCCCChHHHHHHHHHHHcCCeEEEEeCCcchHHHHHHHHHhhC-CCcEEEEEccCCCHHHHHHHHHHHHh
Q 044010           43 EDVSGKVVIITGASSGIGEHLAYEYARRGACLALCARREKSLEEVADTAREIG-SPDVITIRADVSKVDDCRSLVEETMN  121 (248)
Q Consensus        43 ~~~~~k~~lVtGg~~gIG~aia~~l~~~G~~V~l~~r~~~~~~~~~~~l~~~~-~~~v~~~~~D~~~~~~~~~~~~~~~~  121 (248)
                      +++++|++|||||++|||++++++|+++|++|++++|+.++.++..+++++.. +.++.++.+|++|.++++++++++.+
T Consensus         3 ~~l~~k~vlVTGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~v~~~~~~~~~   82 (260)
T 2z1n_A            3 LGIQGKLAVVTAGSSGLGFASALELARNGARLLLFSRNREKLEAAASRIASLVSGAQVDIVAGDIREPGDIDRLFEKARD   82 (260)
T ss_dssp             CCCTTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHHSTTCCEEEEECCTTCHHHHHHHHHHHHH
T ss_pred             CCCCCCEEEEECCCchHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcCCCCeEEEEEccCCCHHHHHHHHHHHHH
Confidence            56899999999999999999999999999999999999988888877776542 22688999999999999999999999


Q ss_pred             HcCCccEEEEccccCCcccccccCChHHHHHHHHhhhHHHHHHHHHHhhhhhhcC-CeEEEEcCccccccCCCCccchHH
Q 044010          122 HFGRLDHLVNNAGISSVALFEDIVNITDFKQIMNINFWGSVYTTRFAVPHLRYTK-GKIVVLSSAASWLTAPRMSFYNAS  200 (248)
Q Consensus       122 ~~g~id~vv~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~-g~iV~isS~~~~~~~~~~~~Y~~s  200 (248)
                      ++| +|++|||||.....++.+ .+.++|++.+++|+.+++.+++.+.|.|.+++ |+||++||..+..+.++...|++|
T Consensus        83 ~~g-id~lv~~Ag~~~~~~~~~-~~~~~~~~~~~~N~~g~~~~~~~~~~~~~~~~~g~iv~isS~~~~~~~~~~~~Y~~s  160 (260)
T 2z1n_A           83 LGG-ADILVYSTGGPRPGRFME-LGVEDWDESYRLLARSAVWVGRRAAEQMVEKGWGRMVYIGSVTLLRPWQDLALSNIM  160 (260)
T ss_dssp             TTC-CSEEEECCCCCCCBCGGG-CCHHHHHHHHHHTHHHHHHHHHHHHHHHHHHTCEEEEEECCGGGTSCCTTBHHHHHH
T ss_pred             hcC-CCEEEECCCCCCCCCccc-CCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcCCcEEEEECchhhcCCCCCCchhHHH
Confidence            999 999999999876655555 57899999999999999999999999997554 899999999999998999999999


Q ss_pred             HHHHHHHHHHHHHHhCC-CeEEEEEecCccccCccc
Q 044010          201 KAALVLFFETLRVELGS-DVGVTIVTPGFIESELTQ  235 (248)
Q Consensus       201 Kaal~~l~~~la~~~~~-~i~v~~v~pg~v~T~~~~  235 (248)
                      |+++++++++++.|+++ +||||+|+||+++|++..
T Consensus       161 K~a~~~~~~~la~e~~~~gi~v~~v~Pg~v~t~~~~  196 (260)
T 2z1n_A          161 RLPVIGVVRTLALELAPHGVTVNAVLPSLILTDRVR  196 (260)
T ss_dssp             THHHHHHHHHHHHHHGGGTEEEEEEEECHHHHCCCC
T ss_pred             HHHHHHHHHHHHHHHhhhCeEEEEEEECCcccchhh
Confidence            99999999999999987 599999999999999976

>3qiv_A Short-chain dehydrogenase or 3-oxoacyl-[acyl-CARR protein] reductase; structural genomics; 2.25A {Mycobacterium avium subsp}

Probab=100.00  E-value=2.5e-38  Score=264.80  Aligned_cols=193  Identities=28%  Similarity=0.462  Sum_probs=153.4

Q ss_pred             ccCCCCCEEEEcCCCChHHHHHHHHHHHcCCeEEEEeCCcchHHHHHHHHHhhCCCcEEEEEccCCCHHHHHHHHHHHHh
Q 044010           42 SEDVSGKVVIITGASSGIGEHLAYEYARRGACLALCARREKSLEEVADTAREIGSPDVITIRADVSKVDDCRSLVEETMN  121 (248)
Q Consensus        42 ~~~~~~k~~lVtGg~~gIG~aia~~l~~~G~~V~l~~r~~~~~~~~~~~l~~~~~~~v~~~~~D~~~~~~~~~~~~~~~~  121 (248)
                      .+++++|++|||||++|||+++|++|+++|++|++++|+.++.++..+++++.+. ++.++.+|++|.++++++++++.+
T Consensus         4 ~~~~~~k~vlITGas~giG~~~a~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~-~~~~~~~D~~~~~~~~~~~~~~~~   82 (253)
T 3qiv_A            4 SMRFENKVGIVTGSGGGIGQAYAEALAREGAAVVVADINAEAAEAVAKQIVADGG-TAISVAVDVSDPESAKAMADRTLA   82 (253)
T ss_dssp             -CTTTTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHTTC-EEEEEECCTTSHHHHHHHHHHHHH
T ss_pred             ccccCCCEEEEECCCChHHHHHHHHHHHCCCEEEEEcCCHHHHHHHHHHHHhcCC-cEEEEEccCCCHHHHHHHHHHHHH
Confidence            3678999999999999999999999999999999999999999988888877654 889999999999999999999999


Q ss_pred             HcCCccEEEEccccCC---cccccccCChHHHHHHHHhhhHHHHHHHHHHhhhhhhc-CCeEEEEcCccccccCCCCccc
Q 044010          122 HFGRLDHLVNNAGISS---VALFEDIVNITDFKQIMNINFWGSVYTTRFAVPHLRYT-KGKIVVLSSAASWLTAPRMSFY  197 (248)
Q Consensus       122 ~~g~id~vv~~ag~~~---~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~-~g~iV~isS~~~~~~~~~~~~Y  197 (248)
                      ++|++|++|||||...   ..+..+ .+.++|++.+++|+.+++.+++.++|.|.++ +|+||++||..++   ++...|
T Consensus        83 ~~g~id~li~~Ag~~~~~~~~~~~~-~~~~~~~~~~~~N~~g~~~~~~~~~~~~~~~~~g~iv~isS~~~~---~~~~~Y  158 (253)
T 3qiv_A           83 EFGGIDYLVNNAAIFGGMKLDFLLT-IDPEYYKKFMSVNLDGALWCTRAVYKKMTKRGGGAIVNQSSTAAW---LYSNYY  158 (253)
T ss_dssp             HHSCCCEEEECCCCCCGGGGGCTTT-SCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTCEEEEEECC-------------
T ss_pred             HcCCCCEEEECCCcCCCCCCccccc-CCHHHHHHHHhhhhHHHHHHHHHHHHHHHhcCCCEEEEECCcccc---CCCchh
Confidence            9999999999999842   233333 5789999999999999999999999998754 5899999998876   345689


Q ss_pred             hHHHHHHHHHHHHHHHHhCCC-eEEEEEecCccccCccccccc
Q 044010          198 NASKAALVLFFETLRVELGSD-VGVTIVTPGFIESELTQGKFL  239 (248)
Q Consensus       198 ~~sKaal~~l~~~la~~~~~~-i~v~~v~pg~v~T~~~~~~~~  239 (248)
                      ++||+++++++++++.|+++. |+||+|+||+++|++.+....
T Consensus       159 ~asK~a~~~~~~~la~e~~~~gi~v~~v~PG~v~t~~~~~~~~  201 (253)
T 3qiv_A          159 GLAKVGINGLTQQLSRELGGRNIRINAIAPGPIDTEANRTTTP  201 (253)
T ss_dssp             -CCHHHHHHHHHHHHHHTTTTTEEEEEEEC-------------
T ss_pred             HHHHHHHHHHHHHHHHHHhhcCeEEEEEEecCCcccchhhcCc
Confidence            999999999999999999874 999999999999998876543

>3ioy_A Short-chain dehydrogenase/reductase SDR; structural genomics, oxidoreductase, PSI-2, protein structure initiative; 1.90A {Novosphingobium aromaticivorans DSM12444}

Probab=100.00  E-value=3.2e-38  Score=273.34  Aligned_cols=194  Identities=26%  Similarity=0.465  Sum_probs=173.2

Q ss_pred             cCCCCCEEEEcCCCChHHHHHHHHHHHcCCeEEEEeCCcchHHHHHHHHHhhCC-CcEEEEEccCCCHHHHHHHHHHHHh
Q 044010           43 EDVSGKVVIITGASSGIGEHLAYEYARRGACLALCARREKSLEEVADTAREIGS-PDVITIRADVSKVDDCRSLVEETMN  121 (248)
Q Consensus        43 ~~~~~k~~lVtGg~~gIG~aia~~l~~~G~~V~l~~r~~~~~~~~~~~l~~~~~-~~v~~~~~D~~~~~~~~~~~~~~~~  121 (248)
                      ++++||++|||||++|||+++|++|+++|++|++++|+.++.++..++++..+. .++.++.+|++|.++++++++++.+
T Consensus         4 ~~l~~k~vlVTGas~gIG~~la~~l~~~G~~Vv~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~Dl~~~~~v~~~~~~~~~   83 (319)
T 3ioy_A            4 KDFAGRTAFVTGGANGVGIGLVRQLLNQGCKVAIADIRQDSIDKALATLEAEGSGPEVMGVQLDVASREGFKMAADEVEA   83 (319)
T ss_dssp             CCCTTCEEEEETTTSTHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHHTCGGGEEEEECCTTCHHHHHHHHHHHHH
T ss_pred             cCCCCCEEEEcCCchHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHhcCCCCeEEEEECCCCCHHHHHHHHHHHHH
Confidence            478999999999999999999999999999999999999999988888876653 3789999999999999999999999


Q ss_pred             HcCCccEEEEccccCCcccccccCChHHHHHHHHhhhHHHHHHHHHHhhhhhhc-------CCeEEEEcCccccccCCCC
Q 044010          122 HFGRLDHLVNNAGISSVALFEDIVNITDFKQIMNINFWGSVYTTRFAVPHLRYT-------KGKIVVLSSAASWLTAPRM  194 (248)
Q Consensus       122 ~~g~id~vv~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~-------~g~iV~isS~~~~~~~~~~  194 (248)
                      ++|++|++|||||+....++.+ .+.++|++.+++|+.|++++++.+.|.|.++       +|+||++||.++..+.++.
T Consensus        84 ~~g~id~lv~nAg~~~~~~~~~-~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~~~~~~~~~g~iV~isS~a~~~~~~~~  162 (319)
T 3ioy_A           84 RFGPVSILCNNAGVNLFQPIEE-SSYDDWDWLLGVNLHGVVNGVTTFVPRMVERVKAGEQKGGHVVNTASMAAFLAAGSP  162 (319)
T ss_dssp             HTCCEEEEEECCCCCCCCCGGG-CCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHHHTTSCCCCEEEEECCGGGTCCCSSS
T ss_pred             hCCCCCEEEECCCcCCCCCccc-CCHHHHHHHHHHHhHHHHHHHHHHHHHHHHhhhccCCCCcEEEEecccccccCCCCC
Confidence            9999999999999887666655 5789999999999999999999999998754       6899999999999999999


Q ss_pred             ccchHHHHHHHHHHHHHHHHhCC-CeEEEEEecCccccCccccc
Q 044010          195 SFYNASKAALVLFFETLRVELGS-DVGVTIVTPGFIESELTQGK  237 (248)
Q Consensus       195 ~~Y~~sKaal~~l~~~la~~~~~-~i~v~~v~pg~v~T~~~~~~  237 (248)
                      .+|++||+|+++|+++++.|+.+ +|+|++|+||+|+|++....
T Consensus       163 ~~Y~aSKaal~~~~~~la~e~~~~gi~v~~v~PG~v~T~~~~~~  206 (319)
T 3ioy_A          163 GIYNTTKFAVRGLSESLHYSLLKYEIGVSVLCPGLVKSYIYASD  206 (319)
T ss_dssp             HHHHHHHHHHHHHHHHHHHHHGGGTCEEEEECCCCBC-------
T ss_pred             HHHHHHHHHHHHHHHHHHHHhhhcCCEEEEEEcCeEccCccccc
Confidence            99999999999999999999987 49999999999999998654

>2b4q_A Rhamnolipids biosynthesis 3-oxoacyl-[acyl- carrier-protein] reductase; RHLG-NADP complex, oxidoreductase; HET: NAP; 2.30A {Pseudomonas aeruginosa}

Probab=100.00  E-value=2.1e-38  Score=269.14  Aligned_cols=192  Identities=29%  Similarity=0.412  Sum_probs=173.5

Q ss_pred             cCCCCCEEEEcCCCChHHHHHHHHHHHcCCeEEEEeCCcchHHHHHHHHHhhCCCcEEEEEccCCCHHHHHHHHHHHHhH
Q 044010           43 EDVSGKVVIITGASSGIGEHLAYEYARRGACLALCARREKSLEEVADTAREIGSPDVITIRADVSKVDDCRSLVEETMNH  122 (248)
Q Consensus        43 ~~~~~k~~lVtGg~~gIG~aia~~l~~~G~~V~l~~r~~~~~~~~~~~l~~~~~~~v~~~~~D~~~~~~~~~~~~~~~~~  122 (248)
                      +++++|++|||||++|||+++|++|+++|++|++++|+.++.++..+++++.+  ++.++.+|++|.++++++++++.++
T Consensus        25 ~~l~~k~vlVTGas~gIG~aia~~L~~~G~~V~~~~r~~~~~~~~~~~l~~~~--~~~~~~~Dv~d~~~v~~~~~~~~~~  102 (276)
T 2b4q_A           25 FSLAGRIALVTGGSRGIGQMIAQGLLEAGARVFICARDAEACADTATRLSAYG--DCQAIPADLSSEAGARRLAQALGEL  102 (276)
T ss_dssp             TCCTTCEEEEETTTSHHHHHHHHHHHHTTCEEEEECSCHHHHHHHHHHHTTSS--CEEECCCCTTSHHHHHHHHHHHHHH
T ss_pred             cCCCCCEEEEeCCCChHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcC--ceEEEEeeCCCHHHHHHHHHHHHHh
Confidence            46899999999999999999999999999999999999888887777775433  6888999999999999999999999


Q ss_pred             cCCccEEEEccccCCcccccccCChHHHHHHHHhhhHHHHHHHHHHhhhhhhcC-----CeEEEEcCccccccCCCCc-c
Q 044010          123 FGRLDHLVNNAGISSVALFEDIVNITDFKQIMNINFWGSVYTTRFAVPHLRYTK-----GKIVVLSSAASWLTAPRMS-F  196 (248)
Q Consensus       123 ~g~id~vv~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~-----g~iV~isS~~~~~~~~~~~-~  196 (248)
                      +|++|++|||||.....++.+ .+.++|++.+++|+.+++.+++.+.|.|++.+     |+||++||..+..+.+... +
T Consensus       103 ~g~iD~lvnnAg~~~~~~~~~-~~~~~~~~~~~vN~~g~~~l~~~~~~~m~~~~~~~~~g~iV~isS~~~~~~~~~~~~~  181 (276)
T 2b4q_A          103 SARLDILVNNAGTSWGAALES-YPVSGWEKVMQLNVTSVFSCIQQLLPLLRRSASAENPARVINIGSVAGISAMGEQAYA  181 (276)
T ss_dssp             CSCCSEEEECCCCCCCCCTTS-CCSHHHHHHHHHHTHHHHHHHHHHHHHHHHHCCSSSCEEEEEECCGGGTCCCCCSCTT
T ss_pred             cCCCCEEEECCCCCCCCCccc-CCHHHHHHHHHHHhHHHHHHHHHHHHHHHhccCCCCCCEEEEECCHHHcCCCCCCccc
Confidence            999999999999877665555 46799999999999999999999999986543     8999999999998888888 9


Q ss_pred             chHHHHHHHHHHHHHHHHhCC-CeEEEEEecCccccCccccc
Q 044010          197 YNASKAALVLFFETLRVELGS-DVGVTIVTPGFIESELTQGK  237 (248)
Q Consensus       197 Y~~sKaal~~l~~~la~~~~~-~i~v~~v~pg~v~T~~~~~~  237 (248)
                      |++||+++++++++++.|+++ +||||+|+||+++|+|....
T Consensus       182 Y~asK~a~~~~~~~la~e~~~~gI~vn~v~PG~v~T~~~~~~  223 (276)
T 2b4q_A          182 YGPSKAALHQLSRMLAKELVGEHINVNVIAPGRFPSRMTRHI  223 (276)
T ss_dssp             HHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECCCCSTTTHHH
T ss_pred             cHHHHHHHHHHHHHHHHHhcccCeEEEEEEeccCcCcchhhc
Confidence            999999999999999999987 59999999999999997653

>3gdg_A Probable NADP-dependent mannitol dehydrogenase; rossmann fold, beta-alpha-beta motifs, open twisted sheet, A NADP, oxidoreductase; 2.30A {Cladosporium herbarum} SCOP: c.2.1.0 PDB: 3gdf_A

Probab=100.00  E-value=3.1e-38  Score=266.22  Aligned_cols=194  Identities=23%  Similarity=0.385  Sum_probs=174.5

Q ss_pred             cCCCCCEEEEcCCC--ChHHHHHHHHHHHcCCeEEEEeCCcchH-HHHHHHHHhhCCCcEEEEEccCCCHHHHHHHHHHH
Q 044010           43 EDVSGKVVIITGAS--SGIGEHLAYEYARRGACLALCARREKSL-EEVADTAREIGSPDVITIRADVSKVDDCRSLVEET  119 (248)
Q Consensus        43 ~~~~~k~~lVtGg~--~gIG~aia~~l~~~G~~V~l~~r~~~~~-~~~~~~l~~~~~~~v~~~~~D~~~~~~~~~~~~~~  119 (248)
                      ++++||++|||||+  +|||+++|++|+++|++|++++|+.++. ++..+++.+..+.++.++.+|++|.++++++++++
T Consensus        16 ~~l~~k~vlITGas~~~giG~~~a~~l~~~G~~v~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~Dl~~~~~v~~~~~~~   95 (267)
T 3gdg_A           16 LSLKGKVVVVTGASGPKGMGIEAARGCAEMGAAVAITYASRAQGAEENVKELEKTYGIKAKAYKCQVDSYESCEKLVKDV   95 (267)
T ss_dssp             HCCTTCEEEETTCCSSSSHHHHHHHHHHHTSCEEEECBSSSSSHHHHHHHHHHHHHCCCEECCBCCTTCHHHHHHHHHHH
T ss_pred             cCcCCCEEEEECCCCCCChHHHHHHHHHHCCCeEEEEeCCcchhHHHHHHHHHHhcCCceeEEecCCCCHHHHHHHHHHH
Confidence            57899999999999  9999999999999999999999987665 66677776654558999999999999999999999


Q ss_pred             HhHcCCccEEEEccccCCcccccccCChHHHHHHHHhhhHHHHHHHHHHhhhhhhc-CCeEEEEcCccccccC--CCCcc
Q 044010          120 MNHFGRLDHLVNNAGISSVALFEDIVNITDFKQIMNINFWGSVYTTRFAVPHLRYT-KGKIVVLSSAASWLTA--PRMSF  196 (248)
Q Consensus       120 ~~~~g~id~vv~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~-~g~iV~isS~~~~~~~--~~~~~  196 (248)
                      .+++|++|++|||||.....++.+ .+.++|++.+++|+.+++++++.+.|.|++. .|+||++||..+..+.  ++..+
T Consensus        96 ~~~~g~id~li~nAg~~~~~~~~~-~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~~~g~iv~isS~~~~~~~~~~~~~~  174 (267)
T 3gdg_A           96 VADFGQIDAFIANAGATADSGILD-GSVEAWNHVVQVDLNGTFHCAKAVGHHFKERGTGSLVITASMSGHIANFPQEQTS  174 (267)
T ss_dssp             HHHTSCCSEEEECCCCCCCSCTTT-SCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCCEEEEECCGGGTSCCSSSCCHH
T ss_pred             HHHcCCCCEEEECCCcCCCCCccc-CCHHHHHHHHHhcchHHHHHHHHHHHHHHHcCCceEEEEccccccccCCCCCCCc
Confidence            999999999999999887766555 5789999999999999999999999998754 4899999999988765  57789


Q ss_pred             chHHHHHHHHHHHHHHHHhCCCeEEEEEecCccccCccccc
Q 044010          197 YNASKAALVLFFETLRVELGSDVGVTIVTPGFIESELTQGK  237 (248)
Q Consensus       197 Y~~sKaal~~l~~~la~~~~~~i~v~~v~pg~v~T~~~~~~  237 (248)
                      |++||+|+++++++++.|++++|+||+|+||+++|+|.+..
T Consensus       175 Y~~sK~a~~~~~~~la~e~~~~i~v~~v~PG~v~t~~~~~~  215 (267)
T 3gdg_A          175 YNVAKAGCIHMARSLANEWRDFARVNSISPGYIDTGLSDFV  215 (267)
T ss_dssp             HHHHHHHHHHHHHHHHHHTTTTCEEEEEEECCEECSCGGGS
T ss_pred             chHHHHHHHHHHHHHHHHhccCcEEEEEECCccccchhhhC
Confidence            99999999999999999998779999999999999998654

>3vtz_A Glucose 1-dehydrogenase; rossmann fold, oxidoreductase, NAD binding; 2.30A {Thermoplasma volcanium}

Probab=100.00  E-value=2.1e-38  Score=268.23  Aligned_cols=185  Identities=27%  Similarity=0.412  Sum_probs=166.3

Q ss_pred             cccCCCCCEEEEcCCCChHHHHHHHHHHHcCCeEEEEeCCcchHHHHHHHHHhhCCCcEEEEEccCCCHHHHHHHHHHHH
Q 044010           41 FSEDVSGKVVIITGASSGIGEHLAYEYARRGACLALCARREKSLEEVADTAREIGSPDVITIRADVSKVDDCRSLVEETM  120 (248)
Q Consensus        41 ~~~~~~~k~~lVtGg~~gIG~aia~~l~~~G~~V~l~~r~~~~~~~~~~~l~~~~~~~v~~~~~D~~~~~~~~~~~~~~~  120 (248)
                      ...+++||++|||||++|||+++|++|+++|++|++++|+.+...           ..+..+.+|++|.++++++++++.
T Consensus         8 ~~~~~~~k~vlVTGas~GIG~aia~~l~~~G~~V~~~~r~~~~~~-----------~~~~~~~~Dv~~~~~v~~~~~~~~   76 (269)
T 3vtz_A            8 HMEEFTDKVAIVTGGSSGIGLAVVDALVRYGAKVVSVSLDEKSDV-----------NVSDHFKIDVTNEEEVKEAVEKTT   76 (269)
T ss_dssp             --CTTTTCEEEESSTTSHHHHHHHHHHHHTTCEEEEEESCC--CT-----------TSSEEEECCTTCHHHHHHHHHHHH
T ss_pred             cccCCCCCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEeCCchhcc-----------CceeEEEecCCCHHHHHHHHHHHH
Confidence            346889999999999999999999999999999999999875431           146788999999999999999999


Q ss_pred             hHcCCccEEEEccccCCcccccccCChHHHHHHHHhhhHHHHHHHHHHhhhhhhc-CCeEEEEcCccccccCCCCccchH
Q 044010          121 NHFGRLDHLVNNAGISSVALFEDIVNITDFKQIMNINFWGSVYTTRFAVPHLRYT-KGKIVVLSSAASWLTAPRMSFYNA  199 (248)
Q Consensus       121 ~~~g~id~vv~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~-~g~iV~isS~~~~~~~~~~~~Y~~  199 (248)
                      +++|++|++|||||.....+..+ .+.++|++.+++|+.+++.+++++.|.|.++ .|+||++||..+..+.++...|++
T Consensus        77 ~~~g~iD~lv~nAg~~~~~~~~~-~~~~~~~~~~~vN~~g~~~l~~~~~~~~~~~~~g~iv~isS~~~~~~~~~~~~Y~a  155 (269)
T 3vtz_A           77 KKYGRIDILVNNAGIEQYSPLHL-TPTEIWRRIIDVNVNGSYLMAKYTIPVMLAIGHGSIINIASVQSYAATKNAAAYVT  155 (269)
T ss_dssp             HHHSCCCEEEECCCCCCCCCGGG-SCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEEECCGGGTSBCTTCHHHHH
T ss_pred             HHcCCCCEEEECCCcCCCCCccc-CCHHHHHHHHHHhhHHHHHHHHHHHHHHHHcCCCEEEEECchhhccCCCCChhHHH
Confidence            99999999999999887666655 5789999999999999999999999998754 589999999999999999999999


Q ss_pred             HHHHHHHHHHHHHHHhCCCeEEEEEecCccccCccccc
Q 044010          200 SKAALVLFFETLRVELGSDVGVTIVTPGFIESELTQGK  237 (248)
Q Consensus       200 sKaal~~l~~~la~~~~~~i~v~~v~pg~v~T~~~~~~  237 (248)
                      ||+|+++|+++++.|++++||||+|+||+|+|+|....
T Consensus       156 sKaa~~~l~~~la~e~~~~i~vn~v~PG~v~T~~~~~~  193 (269)
T 3vtz_A          156 SKHALLGLTRSVAIDYAPKIRCNAVCPGTIMTPMVIKA  193 (269)
T ss_dssp             HHHHHHHHHHHHHHHHTTTEEEEEEEECSBCCHHHHHH
T ss_pred             HHHHHHHHHHHHHHHhcCCCEEEEEEECCCcCcchhhh
Confidence            99999999999999998889999999999999997543

>3qlj_A Short chain dehydrogenase; structural genomics, seattle structural genomics center for infectious disease, ssgcid, tuberculosis; 1.80A {Mycobacterium avium}

Probab=100.00  E-value=2.1e-38  Score=274.68  Aligned_cols=194  Identities=28%  Similarity=0.422  Sum_probs=176.5

Q ss_pred             cCCCCCEEEEcCCCChHHHHHHHHHHHcCCeEEEEeCC----------cchHHHHHHHHHhhCCCcEEEEEccCCCHHHH
Q 044010           43 EDVSGKVVIITGASSGIGEHLAYEYARRGACLALCARR----------EKSLEEVADTAREIGSPDVITIRADVSKVDDC  112 (248)
Q Consensus        43 ~~~~~k~~lVtGg~~gIG~aia~~l~~~G~~V~l~~r~----------~~~~~~~~~~l~~~~~~~v~~~~~D~~~~~~~  112 (248)
                      .+++||++|||||++|||+++|++|+++|++|++++|+          .+..++..+++++.+. ++.++.+|++|.+++
T Consensus        23 ~~l~gk~vlVTGas~GIG~aia~~la~~G~~Vv~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~Dv~d~~~v  101 (322)
T 3qlj_A           23 GVVDGRVVIVTGAGGGIGRAHALAFAAEGARVVVNDIGVGLDGSPASGGSAAQSVVDEITAAGG-EAVADGSNVADWDQA  101 (322)
T ss_dssp             CTTTTCEEEETTTTSHHHHHHHHHHHHTTCEEEEECCCBCTTSSBTCTTSHHHHHHHHHHHTTC-EEEEECCCTTSHHHH
T ss_pred             cccCCCEEEEECCCcHHHHHHHHHHHHCCCEEEEEeCcccccccccccHHHHHHHHHHHHhcCC-cEEEEECCCCCHHHH
Confidence            46899999999999999999999999999999999998          6777888888877664 789999999999999


Q ss_pred             HHHHHHHHhHcCCccEEEEccccCCcccccccCChHHHHHHHHhhhHHHHHHHHHHhhhhhhc-------CCeEEEEcCc
Q 044010          113 RSLVEETMNHFGRLDHLVNNAGISSVALFEDIVNITDFKQIMNINFWGSVYTTRFAVPHLRYT-------KGKIVVLSSA  185 (248)
Q Consensus       113 ~~~~~~~~~~~g~id~vv~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~-------~g~iV~isS~  185 (248)
                      +++++++.+++|++|++|||||.....++.+ .+.++|++.+++|+.+++.+++.+.|.|.+.       +|+||++||.
T Consensus       102 ~~~~~~~~~~~g~iD~lv~nAg~~~~~~~~~-~~~~~~~~~~~vN~~g~~~~~~~~~~~~~~~~~~~~~~~g~IV~isS~  180 (322)
T 3qlj_A          102 AGLIQTAVETFGGLDVLVNNAGIVRDRMIAN-TSEEEFDAVIAVHLKGHFATMRHAAAYWRGLSKAGKAVDGRIINTSSG  180 (322)
T ss_dssp             HHHHHHHHHHHSCCCEEECCCCCCCCCCGGG-CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTTCCCCEEEEEECCH
T ss_pred             HHHHHHHHHHcCCCCEEEECCCCCCCCCccc-CCHHHHHHHHHHhhHHHHHHHHHHHHHHHHccccCCCCCcEEEEEcCH
Confidence            9999999999999999999999987766655 5789999999999999999999999998642       2799999999


Q ss_pred             cccccCCCCccchHHHHHHHHHHHHHHHHhCC-CeEEEEEecCccccCccccccc
Q 044010          186 ASWLTAPRMSFYNASKAALVLFFETLRVELGS-DVGVTIVTPGFIESELTQGKFL  239 (248)
Q Consensus       186 ~~~~~~~~~~~Y~~sKaal~~l~~~la~~~~~-~i~v~~v~pg~v~T~~~~~~~~  239 (248)
                      .+..+.++..+|++||+|+++|+++++.|+++ +||||+|+|| ++|+|....+.
T Consensus       181 ~~~~~~~~~~~Y~asKaal~~l~~~la~e~~~~gI~vn~v~PG-~~t~~~~~~~~  234 (322)
T 3qlj_A          181 AGLQGSVGQGNYSAAKAGIATLTLVGAAEMGRYGVTVNAIAPS-ARTRMTETVFA  234 (322)
T ss_dssp             HHHHCBTTCHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEEC-TTSCCSCCSCC
T ss_pred             HHccCCCCCccHHHHHHHHHHHHHHHHHHhcccCcEEEEecCC-CCCccchhhhh
Confidence            99999999999999999999999999999987 4999999999 99999876543

>1geg_A Acetoin reductase; SDR family, oxidoreductase; HET: GLC NAD; 1.70A {Klebsiella pneumoniae} SCOP: c.2.1.2

Probab=100.00  E-value=3.8e-38  Score=264.46  Aligned_cols=188  Identities=26%  Similarity=0.431  Sum_probs=171.8

Q ss_pred             CCEEEEcCCCChHHHHHHHHHHHcCCeEEEEeCCcchHHHHHHHHHhhCCCcEEEEEccCCCHHHHHHHHHHHHhHcCCc
Q 044010           47 GKVVIITGASSGIGEHLAYEYARRGACLALCARREKSLEEVADTAREIGSPDVITIRADVSKVDDCRSLVEETMNHFGRL  126 (248)
Q Consensus        47 ~k~~lVtGg~~gIG~aia~~l~~~G~~V~l~~r~~~~~~~~~~~l~~~~~~~v~~~~~D~~~~~~~~~~~~~~~~~~g~i  126 (248)
                      +|++|||||++|||++++++|+++|++|++++|+.++.++..+++++.+. ++.++.+|++|.++++++++++.+++|++
T Consensus         2 ~k~vlVTGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~-~~~~~~~D~~~~~~v~~~~~~~~~~~g~i   80 (256)
T 1geg_A            2 KKVALVTGAGQGIGKAIALRLVKDGFAVAIADYNDATAKAVASEINQAGG-HAVAVKVDVSDRDQVFAAVEQARKTLGGF   80 (256)
T ss_dssp             CCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHTTC-CEEEEECCTTSHHHHHHHHHHHHHHTTCC
T ss_pred             CCEEEEECCCChHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcCC-cEEEEEecCCCHHHHHHHHHHHHHHhCCC
Confidence            68999999999999999999999999999999999888888777766553 78899999999999999999999999999


Q ss_pred             cEEEEccccCCcccccccCChHHHHHHHHhhhHHHHHHHHHHhhhhhhc--CCeEEEEcCccccccCCCCccchHHHHHH
Q 044010          127 DHLVNNAGISSVALFEDIVNITDFKQIMNINFWGSVYTTRFAVPHLRYT--KGKIVVLSSAASWLTAPRMSFYNASKAAL  204 (248)
Q Consensus       127 d~vv~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~--~g~iV~isS~~~~~~~~~~~~Y~~sKaal  204 (248)
                      |++|||||.....++.+ .+.++|++.+++|+.+++.+++.+.|.|.++  .|+||++||..+..+.++...|++||+++
T Consensus        81 d~lv~nAg~~~~~~~~~-~~~~~~~~~~~~N~~g~~~~~~~~~~~~~~~~~~g~iv~isS~~~~~~~~~~~~Y~asK~a~  159 (256)
T 1geg_A           81 DVIVNNAGVAPSTPIES-ITPEIVDKVYNINVKGVIWGIQAAVEAFKKEGHGGKIINACSQAGHVGNPELAVYSSSKFAV  159 (256)
T ss_dssp             CEEEECCCCCCCBCGGG-CCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTSCEEEEEECCGGGTSCCTTBHHHHHHHHHH
T ss_pred             CEEEECCCCCCCCChhh-CCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcCCCCEEEEECchhhcCCCCCchhHHHHHHHH
Confidence            99999999876655555 5789999999999999999999999998754  48999999999999989999999999999


Q ss_pred             HHHHHHHHHHhCC-CeEEEEEecCccccCcccc
Q 044010          205 VLFFETLRVELGS-DVGVTIVTPGFIESELTQG  236 (248)
Q Consensus       205 ~~l~~~la~~~~~-~i~v~~v~pg~v~T~~~~~  236 (248)
                      ++++++++.|+++ +||||+|+||+++|+|...
T Consensus       160 ~~~~~~la~e~~~~gi~v~~v~PG~v~t~~~~~  192 (256)
T 1geg_A          160 RGLTQTAARDLAPLGITVNGYCPGIVKTPMWAE  192 (256)
T ss_dssp             HHHHHHHHHHHGGGTEEEEEEEECSBSSHHHHH
T ss_pred             HHHHHHHHHHHHHcCeEEEEEEECCCccchhhh
Confidence            9999999999987 5999999999999998654

>3ezl_A Acetoacetyl-COA reductase; ssgcid, acetyacetyl-COA reductase, oxidoreductase, structural genomics; HET: P4C; 2.25A {Burkholderia pseudomallei 1710B} SCOP: c.2.1.0

Probab=100.00  E-value=2.7e-38  Score=264.98  Aligned_cols=194  Identities=21%  Similarity=0.335  Sum_probs=172.7

Q ss_pred             ccCCCCCEEEEcCCCChHHHHHHHHHHHcCCeEEEEe-CCcchHHHHHHHHHhhCCCcEEEEEccCCCHHHHHHHHHHHH
Q 044010           42 SEDVSGKVVIITGASSGIGEHLAYEYARRGACLALCA-RREKSLEEVADTAREIGSPDVITIRADVSKVDDCRSLVEETM  120 (248)
Q Consensus        42 ~~~~~~k~~lVtGg~~gIG~aia~~l~~~G~~V~l~~-r~~~~~~~~~~~l~~~~~~~v~~~~~D~~~~~~~~~~~~~~~  120 (248)
                      ..+.++|++|||||++|||+++|++|+++|++|++++ |+.++.++..+++++.+. ++.++.+|++|.++++++++++.
T Consensus         8 ~~~~~~k~vlITGas~giG~~ia~~l~~~G~~v~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~Dv~~~~~v~~~~~~~~   86 (256)
T 3ezl_A            8 HMVMSQRIAYVTGGMGGIGTSICQRLHKDGFRVVAGCGPNSPRRVKWLEDQKALGF-DFYASEGNVGDWDSTKQAFDKVK   86 (256)
T ss_dssp             -----CEEEEETTTTSHHHHHHHHHHHHTTEEEEEEECTTCSSHHHHHHHHHHTTC-CCEEEECCTTCHHHHHHHHHHHH
T ss_pred             CCCCCCCEEEEECCCChHHHHHHHHHHHCCCEEEEEeCCCHHHHHHHHHHHHhcCC-eeEEEecCCCCHHHHHHHHHHHH
Confidence            3578899999999999999999999999999999988 677777777777776654 78899999999999999999999


Q ss_pred             hHcCCccEEEEccccCCcccccccCChHHHHHHHHhhhHHHHHHHHHHhhhhhhc-CCeEEEEcCccccccCCCCccchH
Q 044010          121 NHFGRLDHLVNNAGISSVALFEDIVNITDFKQIMNINFWGSVYTTRFAVPHLRYT-KGKIVVLSSAASWLTAPRMSFYNA  199 (248)
Q Consensus       121 ~~~g~id~vv~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~-~g~iV~isS~~~~~~~~~~~~Y~~  199 (248)
                      +++|++|++|||||.....++.+ .+.++|++.+++|+.+++.+++.++|.|.+. .|+||++||..+..+.++...|++
T Consensus        87 ~~~g~id~lv~~Ag~~~~~~~~~-~~~~~~~~~~~vN~~g~~~l~~~~~~~~~~~~~g~iv~isS~~~~~~~~~~~~Y~a  165 (256)
T 3ezl_A           87 AEVGEIDVLVNNAGITRDVVFRK-MTREDWQAVIDTNLTSLFNVTKQVIDGMVERGWGRIINISSVNGQKGQFGQTNYST  165 (256)
T ss_dssp             HHTCCEEEEEECCCCCCCCCTTT-CCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEEECCCCGGGSCSCCHHHHH
T ss_pred             HhcCCCCEEEECCCCCCCCchhh-CCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcCCCEEEEEcchhhccCCCCCcccHH
Confidence            99999999999999887666555 5789999999999999999999999998754 489999999999999999999999


Q ss_pred             HHHHHHHHHHHHHHHhCC-CeEEEEEecCccccCccccc
Q 044010          200 SKAALVLFFETLRVELGS-DVGVTIVTPGFIESELTQGK  237 (248)
Q Consensus       200 sKaal~~l~~~la~~~~~-~i~v~~v~pg~v~T~~~~~~  237 (248)
                      ||+|+++++++++.|+++ +|+||+|+||+++|+|.+..
T Consensus       166 sK~a~~~~~~~la~e~~~~gi~v~~v~PG~v~t~~~~~~  204 (256)
T 3ezl_A          166 AKAGIHGFTMSLAQEVATKGVTVNTVSPGYIGTDMVKAI  204 (256)
T ss_dssp             HHHHHHHHHHHHHHHHGGGTEEEEEEEECSBCCHHHHTS
T ss_pred             HHHHHHHHHHHHHHHHHHhCCEEEEEEECcccCcccccc
Confidence            999999999999999987 49999999999999998654

>3kvo_A Hydroxysteroid dehydrogenase-like protein 2; HSDL2, human hydroxysteroid dehydrogenase like 2, SDHL2, STR genomics, structural genomics consortium; HET: NAP; 2.25A {Homo sapiens}

Probab=100.00  E-value=6.7e-38  Score=274.02  Aligned_cols=193  Identities=24%  Similarity=0.378  Sum_probs=174.2

Q ss_pred             cCCCCCEEEEcCCCChHHHHHHHHHHHcCCeEEEEeCCcch-------HHHHHHHHHhhCCCcEEEEEccCCCHHHHHHH
Q 044010           43 EDVSGKVVIITGASSGIGEHLAYEYARRGACLALCARREKS-------LEEVADTAREIGSPDVITIRADVSKVDDCRSL  115 (248)
Q Consensus        43 ~~~~~k~~lVtGg~~gIG~aia~~l~~~G~~V~l~~r~~~~-------~~~~~~~l~~~~~~~v~~~~~D~~~~~~~~~~  115 (248)
                      .+++||++|||||++|||+++|++|+++|++|++++|+.++       +++..+++++.+. ++.++.+|++|.++++++
T Consensus        41 ~~l~gk~vlVTGas~GIG~aia~~La~~Ga~Vvl~~r~~~~~~~l~~~l~~~~~~~~~~g~-~~~~~~~Dv~d~~~v~~~  119 (346)
T 3kvo_A           41 GRLAGCTVFITGASRGIGKAIALKAAKDGANIVIAAKTAQPHPKLLGTIYTAAEEIEAVGG-KALPCIVDVRDEQQISAA  119 (346)
T ss_dssp             STTTTCEEEEETTTSHHHHHHHHHHHTTTCEEEEEESCCSCCSSSCCCHHHHHHHHHHTTC-EEEEEECCTTCHHHHHHH
T ss_pred             CCCCCCEEEEeCCChHHHHHHHHHHHHCCCEEEEEECChhhhhhhHHHHHHHHHHHHhcCC-eEEEEEccCCCHHHHHHH
Confidence            46899999999999999999999999999999999998764       5566777776654 889999999999999999


Q ss_pred             HHHHHhHcCCccEEEEccccCCcccccccCChHHHHHHHHhhhHHHHHHHHHHhhhhhhcC-CeEEEEcCcccccc--CC
Q 044010          116 VEETMNHFGRLDHLVNNAGISSVALFEDIVNITDFKQIMNINFWGSVYTTRFAVPHLRYTK-GKIVVLSSAASWLT--AP  192 (248)
Q Consensus       116 ~~~~~~~~g~id~vv~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~-g~iV~isS~~~~~~--~~  192 (248)
                      ++++.+++|++|++|||||.....++.+ .+.++|++.+++|+.++++++++++|.|++++ |+||++||..+..+  .+
T Consensus       120 ~~~~~~~~g~iDilVnnAG~~~~~~~~~-~~~~~~~~~~~vN~~g~~~l~~~~lp~m~~~~~g~IV~iSS~~~~~~~~~~  198 (346)
T 3kvo_A          120 VEKAIKKFGGIDILVNNASAISLTNTLD-TPTKRLDLMMNVNTRGTYLASKACIPYLKKSKVAHILNISPPLNLNPVWFK  198 (346)
T ss_dssp             HHHHHHHHSCCCEEEECCCCCCCCCTTT-CCHHHHHHHHHHTHHHHHHHHHHHHHHHTTCSSCEEEEECCCCCCCGGGTS
T ss_pred             HHHHHHHcCCCCEEEECCCCCCCCCccc-CCHHHHHHHHHHHhHHHHHHHHHHHHHHHHCCCCEEEEECCHHHcCCCCCC
Confidence            9999999999999999999887766665 57899999999999999999999999997654 89999999998877  67


Q ss_pred             CCccchHHHHHHHHHHHHHHHHhCCCeEEEEEecC-ccccCccccc
Q 044010          193 RMSFYNASKAALVLFFETLRVELGSDVGVTIVTPG-FIESELTQGK  237 (248)
Q Consensus       193 ~~~~Y~~sKaal~~l~~~la~~~~~~i~v~~v~pg-~v~T~~~~~~  237 (248)
                      +...|++||+++++++++++.|++++||||+|+|| .++|++.+..
T Consensus       199 ~~~~Y~aSKaal~~l~~~la~e~~~gIrvn~v~PG~~i~T~~~~~~  244 (346)
T 3kvo_A          199 QHCAYTIAKYGMSMYVLGMAEEFKGEIAVNALWPKTAIHTAAMDML  244 (346)
T ss_dssp             SSHHHHHHHHHHHHHHHHHHHHTTTTCEEEEEECSBCBCCHHHHHH
T ss_pred             CchHHHHHHHHHHHHHHHHHHHhcCCcEEEEEeCCCccccHHHHhh
Confidence            88999999999999999999999955999999999 5999887644

>3oig_A Enoyl-[acyl-carrier-protein] reductase [NADH]; fatty acid synthesis, rossmann-like fold, enoyl-ACP reductas binding; HET: NAD IMJ; 1.25A {Bacillus subtilis} SCOP: c.2.1.2 PDB: 3oif_A* 2qio_A* 3oje_A 3ojf_A*

Probab=100.00  E-value=7.3e-38  Score=263.91  Aligned_cols=195  Identities=19%  Similarity=0.270  Sum_probs=172.7

Q ss_pred             ccCCCCCEEEEcCCC--ChHHHHHHHHHHHcCCeEEEEeCCcchHHHHHHHHHhhCCCcEEEEEccCCCHHHHHHHHHHH
Q 044010           42 SEDVSGKVVIITGAS--SGIGEHLAYEYARRGACLALCARREKSLEEVADTAREIGSPDVITIRADVSKVDDCRSLVEET  119 (248)
Q Consensus        42 ~~~~~~k~~lVtGg~--~gIG~aia~~l~~~G~~V~l~~r~~~~~~~~~~~l~~~~~~~v~~~~~D~~~~~~~~~~~~~~  119 (248)
                      .++++||++|||||+  +|||+++|++|+++|++|++++|+....+...+..++.+..++.++.+|++|.++++++++++
T Consensus         2 ~~~l~~k~vlVTGasg~~GIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~v~~~~~~~   81 (266)
T 3oig_A            2 NFSLEGRNIVVMGVANKRSIAWGIARSLHEAGARLIFTYAGERLEKSVHELAGTLDRNDSIILPCDVTNDAEIETCFASI   81 (266)
T ss_dssp             CSCCTTCEEEEECCCSTTSHHHHHHHHHHHTTCEEEEEESSGGGHHHHHHHHHTSSSCCCEEEECCCSSSHHHHHHHHHH
T ss_pred             ccccCCCEEEEEcCCCCCcHHHHHHHHHHHCCCEEEEecCchHHHHHHHHHHHhcCCCCceEEeCCCCCHHHHHHHHHHH
Confidence            457899999999999  669999999999999999999998765555555444444447899999999999999999999


Q ss_pred             HhHcCCccEEEEccccCCc----ccccccCChHHHHHHHHhhhHHHHHHHHHHhhhhhhcCCeEEEEcCccccccCCCCc
Q 044010          120 MNHFGRLDHLVNNAGISSV----ALFEDIVNITDFKQIMNINFWGSVYTTRFAVPHLRYTKGKIVVLSSAASWLTAPRMS  195 (248)
Q Consensus       120 ~~~~g~id~vv~~ag~~~~----~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~g~iV~isS~~~~~~~~~~~  195 (248)
                      .+++|++|++|||||...+    .+..+ .+.++|++.+++|+.+++.+++.+.|.|+ ++|+||++||.++..+.++..
T Consensus        82 ~~~~g~id~li~~Ag~~~~~~~~~~~~~-~~~~~~~~~~~~n~~~~~~l~~~~~~~~~-~~g~iv~isS~~~~~~~~~~~  159 (266)
T 3oig_A           82 KEQVGVIHGIAHCIAFANKEELVGEYLN-TNRDGFLLAHNISSYSLTAVVKAARPMMT-EGGSIVTLTYLGGELVMPNYN  159 (266)
T ss_dssp             HHHHSCCCEEEECCCCCCGGGGSSCGGG-CCHHHHHHHHHHHTHHHHHHHHHHGGGCT-TCEEEEEEECGGGTSCCTTTH
T ss_pred             HHHhCCeeEEEEccccccccccccchhh-ccHHHHHHHHHHhHHHHHHHHHHHHhhcC-CCceEEEEecccccccCCCcc
Confidence            9999999999999998762    33344 57899999999999999999999999986 468999999999999999999


Q ss_pred             cchHHHHHHHHHHHHHHHHhCCC-eEEEEEecCccccCcccccc
Q 044010          196 FYNASKAALVLFFETLRVELGSD-VGVTIVTPGFIESELTQGKF  238 (248)
Q Consensus       196 ~Y~~sKaal~~l~~~la~~~~~~-i~v~~v~pg~v~T~~~~~~~  238 (248)
                      .|++||+|+++|+++++.|+++. |+||+|+||+|+|++.....
T Consensus       160 ~Y~asKaa~~~~~~~la~e~~~~gi~v~~v~PG~v~T~~~~~~~  203 (266)
T 3oig_A          160 VMGVAKASLDASVKYLAADLGKENIRVNSISAGPIRTLSAKGIS  203 (266)
T ss_dssp             HHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECCCCSGGGTTCT
T ss_pred             hhHHHHHHHHHHHHHHHHHHhhcCcEEEEEecCccccccccccc
Confidence            99999999999999999999874 99999999999999987643

>2q2v_A Beta-D-hydroxybutyrate dehydrogenase; SDR, oxidoreductase; HET: NAD; 1.90A {Pseudomonas putida} PDB: 2q2q_A* 2q2w_A

Probab=100.00  E-value=6.5e-38  Score=262.87  Aligned_cols=189  Identities=28%  Similarity=0.431  Sum_probs=170.1

Q ss_pred             CCCCCEEEEcCCCChHHHHHHHHHHHcCCeEEEEeCCcchHHHHHHHHHhhCCCcEEEEEccCCCHHHHHHHHHHHHhHc
Q 044010           44 DVSGKVVIITGASSGIGEHLAYEYARRGACLALCARREKSLEEVADTAREIGSPDVITIRADVSKVDDCRSLVEETMNHF  123 (248)
Q Consensus        44 ~~~~k~~lVtGg~~gIG~aia~~l~~~G~~V~l~~r~~~~~~~~~~~l~~~~~~~v~~~~~D~~~~~~~~~~~~~~~~~~  123 (248)
                      ++++|++|||||++|||++++++|+++|++|++++|+.+  ++..+++++.+ .++.++.+|++|.++++++++++.+++
T Consensus         1 ~l~~k~vlVTGas~giG~~ia~~l~~~G~~V~~~~r~~~--~~~~~~l~~~~-~~~~~~~~D~~~~~~v~~~~~~~~~~~   77 (255)
T 2q2v_A            1 TLKGKTALVTGSTSGIGLGIAQVLARAGANIVLNGFGDP--APALAEIARHG-VKAVHHPADLSDVAQIEALFALAEREF   77 (255)
T ss_dssp             CCTTCEEEESSCSSHHHHHHHHHHHHTTCEEEEECSSCC--HHHHHHHHTTS-CCEEEECCCTTSHHHHHHHHHHHHHHH
T ss_pred             CCCCCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEeCCch--HHHHHHHHhcC-CceEEEeCCCCCHHHHHHHHHHHHHHc
Confidence            478999999999999999999999999999999999876  45556665544 378889999999999999999999999


Q ss_pred             CCccEEEEccccCCcccccccCChHHHHHHHHhhhHHHHHHHHHHhhhhhhcC-CeEEEEcCccccccCCCCccchHHHH
Q 044010          124 GRLDHLVNNAGISSVALFEDIVNITDFKQIMNINFWGSVYTTRFAVPHLRYTK-GKIVVLSSAASWLTAPRMSFYNASKA  202 (248)
Q Consensus       124 g~id~vv~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~-g~iV~isS~~~~~~~~~~~~Y~~sKa  202 (248)
                      |++|++|||||.....++.+ .+.++|++.+++|+.+++.+++.++|.|++++ |+||++||..+..+.++...|++||+
T Consensus        78 g~id~lv~~Ag~~~~~~~~~-~~~~~~~~~~~~N~~~~~~~~~~~~~~~~~~~~g~iv~isS~~~~~~~~~~~~Y~~sK~  156 (255)
T 2q2v_A           78 GGVDILVNNAGIQHVAPVEQ-FPLESWDKIIALNLSAVFHGTRLALPGMRARNWGRIINIASVHGLVGSTGKAAYVAAKH  156 (255)
T ss_dssp             SSCSEEEECCCCCCCBCGGG-CCHHHHHHHHHHHTHHHHHHHHHHHHHHHHTTCEEEEEECCGGGTSCCTTBHHHHHHHH
T ss_pred             CCCCEEEECCCCCCCCChhh-CCHHHHHHHHHHHhHHHHHHHHHHHHHHHHcCCcEEEEEcCchhccCCCCchhHHHHHH
Confidence            99999999999876655555 57899999999999999999999999997654 89999999999999889999999999


Q ss_pred             HHHHHHHHHHHHhCC-CeEEEEEecCccccCcccc
Q 044010          203 ALVLFFETLRVELGS-DVGVTIVTPGFIESELTQG  236 (248)
Q Consensus       203 al~~l~~~la~~~~~-~i~v~~v~pg~v~T~~~~~  236 (248)
                      ++++++++++.|+++ +||||+|+||+++|++...
T Consensus       157 a~~~~~~~la~e~~~~gi~v~~v~Pg~v~t~~~~~  191 (255)
T 2q2v_A          157 GVVGLTKVVGLETATSNVTCNAICPGWVLTPLVQK  191 (255)
T ss_dssp             HHHHHHHHHHHHTTTSSEEEEEEEESSBCCHHHHH
T ss_pred             HHHHHHHHHHHHhcccCcEEEEEeeCCCcCcchhh
Confidence            999999999999987 4999999999999998654

>2rhc_B Actinorhodin polyketide ketoreductase; oxidoreductase, combinatorial biosynthesis, short chain dehydrogenase/reductase; HET: NAP EMO; 2.10A {Streptomyces coelicolor} SCOP: c.2.1.2 PDB: 2rh4_A* 1w4z_A* 3csd_B* 3qrw_A* 3ri3_B* 2rhr_B* 1x7g_A* 1x7h_A* 1xr3_A*

Probab=100.00  E-value=6.2e-38  Score=266.26  Aligned_cols=191  Identities=28%  Similarity=0.419  Sum_probs=174.8

Q ss_pred             CCCCCEEEEcCCCChHHHHHHHHHHHcCCeEEEEeCCcchHHHHHHHHHhhCCCcEEEEEccCCCHHHHHHHHHHHHhHc
Q 044010           44 DVSGKVVIITGASSGIGEHLAYEYARRGACLALCARREKSLEEVADTAREIGSPDVITIRADVSKVDDCRSLVEETMNHF  123 (248)
Q Consensus        44 ~~~~k~~lVtGg~~gIG~aia~~l~~~G~~V~l~~r~~~~~~~~~~~l~~~~~~~v~~~~~D~~~~~~~~~~~~~~~~~~  123 (248)
                      ++++|++|||||++|||++++++|+++|++|++++|+.++.++..+++++.+. ++.++.+|++|.++++++++++.+++
T Consensus        19 ~l~~k~vlVTGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~l~~~~~-~~~~~~~Dv~~~~~v~~~~~~~~~~~   97 (277)
T 2rhc_B           19 TQDSEVALVTGATSGIGLEIARRLGKEGLRVFVCARGEEGLRTTLKELREAGV-EADGRTCDVRSVPEIEALVAAVVERY   97 (277)
T ss_dssp             CTTSCEEEEETCSSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHTTC-CEEEEECCTTCHHHHHHHHHHHHHHT
T ss_pred             cCCCCEEEEECCCCHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcCC-ceEEEECCCCCHHHHHHHHHHHHHHh
Confidence            68899999999999999999999999999999999999888888777876553 78899999999999999999999999


Q ss_pred             CCccEEEEccccCCcccccccCChHHHHHHHHhhhHHHHHHHHHHhhh--hhhcC-CeEEEEcCccccccCCCCccchHH
Q 044010          124 GRLDHLVNNAGISSVALFEDIVNITDFKQIMNINFWGSVYTTRFAVPH--LRYTK-GKIVVLSSAASWLTAPRMSFYNAS  200 (248)
Q Consensus       124 g~id~vv~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~--~~~~~-g~iV~isS~~~~~~~~~~~~Y~~s  200 (248)
                      |++|++|||||.....++.+ .+.++|++.+++|+.+++++++.+.|.  |.+++ |+||++||..+..+.++..+|++|
T Consensus        98 g~iD~lv~~Ag~~~~~~~~~-~~~~~~~~~~~~N~~g~~~l~~~~~~~~~m~~~~~g~iv~isS~~~~~~~~~~~~Y~as  176 (277)
T 2rhc_B           98 GPVDVLVNNAGRPGGGATAE-LADELWLDVVETNLTGVFRVTKQVLKAGGMLERGTGRIVNIASTGGKQGVVHAAPYSAS  176 (277)
T ss_dssp             CSCSEEEECCCCCCCSCGGG-CCHHHHHHHHHHHTHHHHHHHHHHHTTTCHHHHTEEEEEEECCGGGTSCCTTCHHHHHH
T ss_pred             CCCCEEEECCCCCCCCChhh-CCHHHHHHHHHHHhHHHHHHHHHHhChhhHhhcCCeEEEEECccccccCCCCCccHHHH
Confidence            99999999999876655555 578999999999999999999999998  87554 899999999999998899999999


Q ss_pred             HHHHHHHHHHHHHHhCCC-eEEEEEecCccccCcccc
Q 044010          201 KAALVLFFETLRVELGSD-VGVTIVTPGFIESELTQG  236 (248)
Q Consensus       201 Kaal~~l~~~la~~~~~~-i~v~~v~pg~v~T~~~~~  236 (248)
                      |+++++++++++.|+++. ||||+|+||+++|++...
T Consensus       177 K~a~~~~~~~la~e~~~~gi~v~~v~PG~v~t~~~~~  213 (277)
T 2rhc_B          177 KHGVVGFTKALGLELARTGITVNAVCPGFVETPMAAS  213 (277)
T ss_dssp             HHHHHHHHHHHHHHHTTTEEEEEEEEECSBCSHHHHH
T ss_pred             HHHHHHHHHHHHHHHHHhCcEEEEEecCcCcCchhhh
Confidence            999999999999999875 999999999999998654

>1hdc_A 3-alpha, 20 beta-hydroxysteroid dehydrogenase; oxidoreductase; HET: CBO; 2.20A {Streptomyces exfoliatus} SCOP: c.2.1.2 PDB: 2hsd_A*

Probab=100.00  E-value=2.5e-38  Score=265.39  Aligned_cols=188  Identities=31%  Similarity=0.422  Sum_probs=170.0

Q ss_pred             CCCCCEEEEcCCCChHHHHHHHHHHHcCCeEEEEeCCcchHHHHHHHHHhhCCCcEEEEEccCCCHHHHHHHHHHHHhHc
Q 044010           44 DVSGKVVIITGASSGIGEHLAYEYARRGACLALCARREKSLEEVADTAREIGSPDVITIRADVSKVDDCRSLVEETMNHF  123 (248)
Q Consensus        44 ~~~~k~~lVtGg~~gIG~aia~~l~~~G~~V~l~~r~~~~~~~~~~~l~~~~~~~v~~~~~D~~~~~~~~~~~~~~~~~~  123 (248)
                      ++++|++|||||++|||++++++|+++|++|++++|+.++.++..+++    +.++.++.+|++|.++++++++++.+++
T Consensus         2 ~l~~k~vlVTGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~----~~~~~~~~~D~~~~~~~~~~~~~~~~~~   77 (254)
T 1hdc_A            2 DLSGKTVIITGGARGLGAEAARQAVAAGARVVLADVLDEEGAATAREL----GDAARYQHLDVTIEEDWQRVVAYAREEF   77 (254)
T ss_dssp             CCCCSEEEEETTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHTT----GGGEEEEECCTTCHHHHHHHHHHHHHHH
T ss_pred             CCCCCEEEEECCCcHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHh----CCceeEEEecCCCHHHHHHHHHHHHHHc
Confidence            578999999999999999999999999999999999987766655444    2368899999999999999999999999


Q ss_pred             CCccEEEEccccCCcccccccCChHHHHHHHHhhhHHHHHHHHHHhhhhhhc-CCeEEEEcCccccccCCCCccchHHHH
Q 044010          124 GRLDHLVNNAGISSVALFEDIVNITDFKQIMNINFWGSVYTTRFAVPHLRYT-KGKIVVLSSAASWLTAPRMSFYNASKA  202 (248)
Q Consensus       124 g~id~vv~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~-~g~iV~isS~~~~~~~~~~~~Y~~sKa  202 (248)
                      |++|++|||||.....++.+ .+.++|++.+++|+.+++.+++.++|.|+++ .|+||++||..+..+.++..+|++||+
T Consensus        78 g~iD~lv~nAg~~~~~~~~~-~~~~~~~~~~~~N~~g~~~~~~~~~~~~~~~~~g~iv~isS~~~~~~~~~~~~Y~asK~  156 (254)
T 1hdc_A           78 GSVDGLVNNAGISTGMFLET-ESVERFRKVVEINLTGVFIGMKTVIPAMKDAGGGSIVNISSAAGLMGLALTSSYGASKW  156 (254)
T ss_dssp             SCCCEEEECCCCCCCSCGGG-SCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEEECCGGGTSCCTTCHHHHHHHH
T ss_pred             CCCCEEEECCCCCCCCChhh-CCHHHHHHHHHHhhHHHHHHHHHHHHHHHHcCCCEEEEECchhhccCCCCchhHHHHHH
Confidence            99999999999876655554 5789999999999999999999999999755 489999999999998899999999999


Q ss_pred             HHHHHHHHHHHHhCC-CeEEEEEecCccccCcccc
Q 044010          203 ALVLFFETLRVELGS-DVGVTIVTPGFIESELTQG  236 (248)
Q Consensus       203 al~~l~~~la~~~~~-~i~v~~v~pg~v~T~~~~~  236 (248)
                      ++++++++++.|+++ +||||+|+||+++|++.+.
T Consensus       157 a~~~~~~~la~e~~~~gi~v~~v~Pg~v~t~~~~~  191 (254)
T 1hdc_A          157 GVRGLSKLAAVELGTDRIRVNSVHPGMTYTPMTAE  191 (254)
T ss_dssp             HHHHHHHHHHHHHGGGTEEEEEEEECSBCCHHHHH
T ss_pred             HHHHHHHHHHHHhhhcCeEEEEEecccCcCccccc
Confidence            999999999999987 4999999999999998664

>3pxx_A Carveol dehydrogenase; structural genomics, seattle structural genomics center for infectious disease, ssgcid, NAD, tuberculosis; HET: NAD; 2.00A {Mycobacterium avium} SCOP: c.2.1.0

Probab=100.00  E-value=1.8e-38  Score=270.22  Aligned_cols=189  Identities=24%  Similarity=0.402  Sum_probs=168.3

Q ss_pred             cCCCCCEEEEcCCCChHHHHHHHHHHHcCCeEEEEeCC------------cchHHHHHHHHHhhCCCcEEEEEccCCCHH
Q 044010           43 EDVSGKVVIITGASSGIGEHLAYEYARRGACLALCARR------------EKSLEEVADTAREIGSPDVITIRADVSKVD  110 (248)
Q Consensus        43 ~~~~~k~~lVtGg~~gIG~aia~~l~~~G~~V~l~~r~------------~~~~~~~~~~l~~~~~~~v~~~~~D~~~~~  110 (248)
                      .+++||++|||||++|||+++|++|+++|++|++++|+            .+..++..++++..+ .++.++.+|++|.+
T Consensus         6 ~~l~gk~vlVTGas~gIG~~ia~~l~~~G~~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~D~~~~~   84 (287)
T 3pxx_A            6 GRVQDKVVLVTGGARGQGRSHAVKLAEEGADIILFDICHDIETNEYPLATSRDLEEAGLEVEKTG-RKAYTAEVDVRDRA   84 (287)
T ss_dssp             CTTTTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEECCSCCTTSCSCCCCHHHHHHHHHHHHHTT-SCEEEEECCTTCHH
T ss_pred             cccCCCEEEEeCCCChHHHHHHHHHHHCCCeEEEEcccccccccccchhhhHHHHHHHHHHHhcC-CceEEEEccCCCHH
Confidence            47899999999999999999999999999999999997            455566666666554 48999999999999


Q ss_pred             HHHHHHHHHHhHcCCccEEEEccccCCcccccccCChHHHHHHHHhhhHHHHHHHHHHhhhhhhcCCeEEEEcCcccccc
Q 044010          111 DCRSLVEETMNHFGRLDHLVNNAGISSVALFEDIVNITDFKQIMNINFWGSVYTTRFAVPHLRYTKGKIVVLSSAASWLT  190 (248)
Q Consensus       111 ~~~~~~~~~~~~~g~id~vv~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~g~iV~isS~~~~~~  190 (248)
                      +++++++++.+++|++|++|||||.....  .+ .+.++|++.+++|+.+++++++++.|.|. ++|+||++||..+..+
T Consensus        85 ~v~~~~~~~~~~~g~id~lv~nAg~~~~~--~~-~~~~~~~~~~~~N~~g~~~l~~~~~~~~~-~~g~iv~isS~~~~~~  160 (287)
T 3pxx_A           85 AVSRELANAVAEFGKLDVVVANAGICPLG--AH-LPVQAFADAFDVDFVGVINTVHAALPYLT-SGASIITTGSVAGLIA  160 (287)
T ss_dssp             HHHHHHHHHHHHHSCCCEEEECCCCCCCC--TT-CCTHHHHHHHHHHTHHHHHHHHHHGGGCC-TTCEEEEECCHHHHHH
T ss_pred             HHHHHHHHHHHHcCCCCEEEECCCcCccc--Cc-CCHHHHHHHhhhhhhhhHHHHHHHHHHhh-cCcEEEEeccchhccc
Confidence            99999999999999999999999987654  22 46799999999999999999999999994 6689999999988766


Q ss_pred             C-----------CCCccchHHHHHHHHHHHHHHHHhCC-CeEEEEEecCccccCcccc
Q 044010          191 A-----------PRMSFYNASKAALVLFFETLRVELGS-DVGVTIVTPGFIESELTQG  236 (248)
Q Consensus       191 ~-----------~~~~~Y~~sKaal~~l~~~la~~~~~-~i~v~~v~pg~v~T~~~~~  236 (248)
                      .           ++..+|++||+++++|+++++.|+++ +||||+|+||+|+|+|.+.
T Consensus       161 ~~~~~~~~~~~~~~~~~Y~asK~a~~~~~~~la~e~~~~gi~vn~v~PG~v~T~~~~~  218 (287)
T 3pxx_A          161 AAQPPGAGGPQGPGGAGYSYAKQLVDSYTLQLAAQLAPQSIRANVIHPTNVNTDMLNS  218 (287)
T ss_dssp             HHCCC-----CHHHHHHHHHHHHHHHHHHHHHHHHHGGGTCEEEEEEESSBSSTTTSS
T ss_pred             ccccccccccCCCccchHHHHHHHHHHHHHHHHHHHhhcCcEEEEEecCccccccccc
Confidence            5           56678999999999999999999987 4999999999999999864

>1uls_A Putative 3-oxoacyl-acyl carrier protein reductase; structural genomics, riken structural genomics/proteomics initiative, RSGI; 2.40A {Thermus thermophilus} SCOP: c.2.1.2

Probab=100.00  E-value=4.8e-38  Score=262.35  Aligned_cols=186  Identities=31%  Similarity=0.475  Sum_probs=166.7

Q ss_pred             cCCCCCEEEEcCCCChHHHHHHHHHHHcCCeEEEEeCCcchHHHHHHHHHhhCCCcEEEEEccCCCHHHHHHHHHHHHhH
Q 044010           43 EDVSGKVVIITGASSGIGEHLAYEYARRGACLALCARREKSLEEVADTAREIGSPDVITIRADVSKVDDCRSLVEETMNH  122 (248)
Q Consensus        43 ~~~~~k~~lVtGg~~gIG~aia~~l~~~G~~V~l~~r~~~~~~~~~~~l~~~~~~~v~~~~~D~~~~~~~~~~~~~~~~~  122 (248)
                      |++++|+++||||++|||++++++|+++|++|++++|+.++.++..+++      .+.++.+|++|.++++++++++.++
T Consensus         1 m~l~~k~vlVTGas~giG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~------~~~~~~~D~~~~~~~~~~~~~~~~~   74 (245)
T 1uls_A            1 MRLKDKAVLITGAAHGIGRATLELFAKEGARLVACDIEEGPLREAAEAV------GAHPVVMDVADPASVERGFAEALAH   74 (245)
T ss_dssp             CTTTTCEEEEESTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHTT------TCEEEECCTTCHHHHHHHHHHHHHH
T ss_pred             CCCCCCEEEEECCCCHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHc------CCEEEEecCCCHHHHHHHHHHHHHH
Confidence            3678999999999999999999999999999999999987665544332      2678899999999999999999999


Q ss_pred             cCCccEEEEccccCCcccccccCChHHHHHHHHhhhHHHHHHHHHHhhhhhhc-CCeEEEEcCccccccCCCCccchHHH
Q 044010          123 FGRLDHLVNNAGISSVALFEDIVNITDFKQIMNINFWGSVYTTRFAVPHLRYT-KGKIVVLSSAASWLTAPRMSFYNASK  201 (248)
Q Consensus       123 ~g~id~vv~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~-~g~iV~isS~~~~~~~~~~~~Y~~sK  201 (248)
                      +|++|++|||||.....++.+ .+.++|++.+++|+.+++.+++.+.|.|+++ .|+||++||.. ..+.++...|++||
T Consensus        75 ~g~id~lvn~Ag~~~~~~~~~-~~~~~~~~~~~~N~~g~~~l~~~~~~~m~~~~~g~iv~isS~~-~~~~~~~~~Y~asK  152 (245)
T 1uls_A           75 LGRLDGVVHYAGITRDNFHWK-MPLEDWELVLRVNLTGSFLVAKAASEAMREKNPGSIVLTASRV-YLGNLGQANYAASM  152 (245)
T ss_dssp             HSSCCEEEECCCCCCCCCGGG-CCHHHHHHHHHHHHHHHHHHHHHHHHHHTTTCCEEEEEECCGG-GGCCTTCHHHHHHH
T ss_pred             cCCCCEEEECCCCCCCCChhh-CCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcCCCEEEEEccch-hcCCCCchhHHHHH
Confidence            999999999999876655555 5789999999999999999999999999755 48999999998 78888889999999


Q ss_pred             HHHHHHHHHHHHHhCC-CeEEEEEecCccccCcccc
Q 044010          202 AALVLFFETLRVELGS-DVGVTIVTPGFIESELTQG  236 (248)
Q Consensus       202 aal~~l~~~la~~~~~-~i~v~~v~pg~v~T~~~~~  236 (248)
                      +++++++++++.|+++ +||||+|+||+++|++...
T Consensus       153 ~a~~~~~~~la~e~~~~gi~v~~v~PG~v~t~~~~~  188 (245)
T 1uls_A          153 AGVVGLTRTLALELGRWGIRVNTLAPGFIETRMTAK  188 (245)
T ss_dssp             HHHHHHHHHHHHHHGGGTEEEEEEEECSBCCTTTSS
T ss_pred             HHHHHHHHHHHHHHhHhCeEEEEEEeCcCcCcchhh
Confidence            9999999999999987 4999999999999999764

>1oaa_A Sepiapterin reductase; tetrahydrobiopterin, oxidoreductase; HET: NAP; 1.25A {Mus musculus} SCOP: c.2.1.2 PDB: 1nas_A* 1sep_A* 1z6z_A*

Probab=100.00  E-value=4.5e-38  Score=264.34  Aligned_cols=193  Identities=23%  Similarity=0.297  Sum_probs=172.6

Q ss_pred             CCCCCEEEEcCCCChHHHHHHHHHHH---cCCeEEEEeCCcchHHHHHHHHHhhC-CCcEEEEEccCCCHHHHHHHHHHH
Q 044010           44 DVSGKVVIITGASSGIGEHLAYEYAR---RGACLALCARREKSLEEVADTAREIG-SPDVITIRADVSKVDDCRSLVEET  119 (248)
Q Consensus        44 ~~~~k~~lVtGg~~gIG~aia~~l~~---~G~~V~l~~r~~~~~~~~~~~l~~~~-~~~v~~~~~D~~~~~~~~~~~~~~  119 (248)
                      ++++|++|||||++|||++++++|++   +|++|++++|+.++.++..+++++.+ +.++.++.+|++|.++++++++++
T Consensus         3 ~l~~k~~lVTGas~gIG~~ia~~l~~~~~~G~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~   82 (259)
T 1oaa_A            3 GLGCAVCVLTGASRGFGRALAPQLARLLSPGSVMLVSARSESMLRQLKEELGAQQPDLKVVLAAADLGTEAGVQRLLSAV   82 (259)
T ss_dssp             CCBSEEEEESSCSSHHHHHHHHHHHTTBCTTCEEEEEESCHHHHHHHHHHHHHHCTTSEEEEEECCTTSHHHHHHHHHHH
T ss_pred             CCCCcEEEEeCCCChHHHHHHHHHHHhhcCCCeEEEEeCCHHHHHHHHHHHHhhCCCCeEEEEecCCCCHHHHHHHHHHH
Confidence            57899999999999999999999999   89999999999988888888887653 347889999999999999999999


Q ss_pred             Hh--HcCCcc--EEEEccccCCc--ccccccCChHHHHHHHHhhhHHHHHHHHHHhhhhhhc---CCeEEEEcCcccccc
Q 044010          120 MN--HFGRLD--HLVNNAGISSV--ALFEDIVNITDFKQIMNINFWGSVYTTRFAVPHLRYT---KGKIVVLSSAASWLT  190 (248)
Q Consensus       120 ~~--~~g~id--~vv~~ag~~~~--~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~---~g~iV~isS~~~~~~  190 (248)
                      .+  .+|++|  ++|||||....  .++.+..+.++|++.+++|+.+++.+++++.|.|.++   +|+||++||..+..+
T Consensus        83 ~~~~~~g~~d~~~lvnnAg~~~~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~~~~~g~iv~isS~~~~~~  162 (259)
T 1oaa_A           83 RELPRPEGLQRLLLINNAATLGDVSKGFLNVNDLAEVNNYWALNLTSMLCLTSGTLNAFQDSPGLSKTVVNISSLCALQP  162 (259)
T ss_dssp             HHSCCCTTCCEEEEEECCCCCCCCSSCGGGCCCHHHHHHHHHHHTHHHHHHHHHHHHTSCCCTTCEEEEEEECCGGGTSC
T ss_pred             HhccccccCCccEEEECCcccCCCCcchhccCCHHHHHHHHHHHHHHHHHHHHHHHHHHhhccCCCceEEEEcCchhcCC
Confidence            88  678899  99999998643  3344424679999999999999999999999999764   389999999999999


Q ss_pred             CCCCccchHHHHHHHHHHHHHHHHhCCCeEEEEEecCccccCccccc
Q 044010          191 APRMSFYNASKAALVLFFETLRVELGSDVGVTIVTPGFIESELTQGK  237 (248)
Q Consensus       191 ~~~~~~Y~~sKaal~~l~~~la~~~~~~i~v~~v~pg~v~T~~~~~~  237 (248)
                      .++...|++||+|+++|+++++.|+++ ||||+|+||+++|+|.+..
T Consensus       163 ~~~~~~Y~asKaa~~~~~~~la~e~~~-i~vn~v~PG~v~T~~~~~~  208 (259)
T 1oaa_A          163 YKGWGLYCAGKAARDMLYQVLAAEEPS-VRVLSYAPGPLDNDMQQLA  208 (259)
T ss_dssp             CTTCHHHHHHHHHHHHHHHHHHHHCTT-EEEEEEECCSBSSHHHHHH
T ss_pred             CCCccHHHHHHHHHHHHHHHHHhhCCC-ceEEEecCCCcCcchHHHH
Confidence            999999999999999999999999975 9999999999999997643

>1spx_A Short-chain reductase family member (5L265); parallel beta-sheet of seven strands in the order 3214567; 2.10A {Caenorhabditis elegans} SCOP: c.2.1.2

Probab=100.00  E-value=4.8e-38  Score=266.64  Aligned_cols=192  Identities=32%  Similarity=0.495  Sum_probs=165.3

Q ss_pred             CCCCCEEEEcCCCChHHHHHHHHHHHcCCeEEEEeCCcchHHHHHHHHHhh--CCCcEEEEEccCCCHHHHHHHHHHHHh
Q 044010           44 DVSGKVVIITGASSGIGEHLAYEYARRGACLALCARREKSLEEVADTAREI--GSPDVITIRADVSKVDDCRSLVEETMN  121 (248)
Q Consensus        44 ~~~~k~~lVtGg~~gIG~aia~~l~~~G~~V~l~~r~~~~~~~~~~~l~~~--~~~~v~~~~~D~~~~~~~~~~~~~~~~  121 (248)
                      ++++|++|||||++|||++++++|+++|++|++++|+.++.++..+++...  .+.++.++.+|++|.++++++++++.+
T Consensus         3 ~~~~k~vlVTGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~   82 (278)
T 1spx_A            3 RFAEKVAIITGSSNGIGRATAVLFAREGAKVTITGRHAERLEETRQQILAAGVSEQNVNSVVADVTTDAGQDEILSTTLG   82 (278)
T ss_dssp             TTTTCEEEETTTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHTTCCGGGEEEEECCTTSHHHHHHHHHHHHH
T ss_pred             CCCCCEEEEeCCCchHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcccCCCceeEEecccCCHHHHHHHHHHHHH
Confidence            578999999999999999999999999999999999988888777777321  223688999999999999999999999


Q ss_pred             HcCCccEEEEccccCCcccccccC----ChHHHHHHHHhhhHHHHHHHHHHhhhhhhcCCeEEEEcCccc-cccCCCCcc
Q 044010          122 HFGRLDHLVNNAGISSVALFEDIV----NITDFKQIMNINFWGSVYTTRFAVPHLRYTKGKIVVLSSAAS-WLTAPRMSF  196 (248)
Q Consensus       122 ~~g~id~vv~~ag~~~~~~~~~~~----~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~g~iV~isS~~~-~~~~~~~~~  196 (248)
                      ++|++|++|||||.....+..+ .    +.++|++.+++|+.+++.+++++.|.|++++|+||++||..+ ..+.++...
T Consensus        83 ~~g~id~lv~~Ag~~~~~~~~~-~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~~g~iv~isS~~~~~~~~~~~~~  161 (278)
T 1spx_A           83 KFGKLDILVNNAGAAIPDSQSK-TGTAQSIESYDATLNLNLRSVIALTKKAVPHLSSTKGEIVNISSIASGLHATPDFPY  161 (278)
T ss_dssp             HHSCCCEEEECCC--------------CCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEECCTTSSSSCCTTSHH
T ss_pred             HcCCCCEEEECCCCCCCccccc-ccccCCHHHHHHHHHHHhHHHHHHHHHHHHHHhhcCCeEEEEecccccccCCCCccH
Confidence            9999999999999876554433 4    679999999999999999999999999766699999999998 888888999


Q ss_pred             chHHHHHHHHHHHHHHHHhCC-CeEEEEEecCccccCcccc
Q 044010          197 YNASKAALVLFFETLRVELGS-DVGVTIVTPGFIESELTQG  236 (248)
Q Consensus       197 Y~~sKaal~~l~~~la~~~~~-~i~v~~v~pg~v~T~~~~~  236 (248)
                      |++||+++++++++++.|+++ +|+||+|+||+++|++...
T Consensus       162 Y~~sK~a~~~~~~~la~e~~~~gi~v~~v~Pg~v~t~~~~~  202 (278)
T 1spx_A          162 YSIAKAAIDQYTRNTAIDLIQHGIRVNSISPGLVATGFGSA  202 (278)
T ss_dssp             HHHHHHHHHHHHHHHHHHHGGGTCEEEEEEECCBCCCC---
T ss_pred             HHHHHHHHHHHHHHHHHHHHhcCcEEEEEecCcccCccccc
Confidence            999999999999999999987 5999999999999998754

>3gk3_A Acetoacetyl-COA reductase; acetoacetyl-CO reductase, oxidoreductase, structural genomics; 2.10A {Burkholderia pseudomallei 1710B}

Probab=100.00  E-value=5e-38  Score=265.64  Aligned_cols=193  Identities=23%  Similarity=0.385  Sum_probs=170.1

Q ss_pred             CCCCEEEEcCCCChHHHHHHHHHHHcCCeEEEEe-CCcchHHHHHHHHHhhCCCcEEEEEccCCCHHHHHHHHHHHHhHc
Q 044010           45 VSGKVVIITGASSGIGEHLAYEYARRGACLALCA-RREKSLEEVADTAREIGSPDVITIRADVSKVDDCRSLVEETMNHF  123 (248)
Q Consensus        45 ~~~k~~lVtGg~~gIG~aia~~l~~~G~~V~l~~-r~~~~~~~~~~~l~~~~~~~v~~~~~D~~~~~~~~~~~~~~~~~~  123 (248)
                      +++|++|||||++|||+++|++|+++|++|++++ |+.+..++..+++...+ .++.++.+|++|.++++++++++.+++
T Consensus        23 ~~~k~vlITGas~gIG~~~a~~l~~~G~~v~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~Dl~~~~~v~~~~~~~~~~~  101 (269)
T 3gk3_A           23 QAKRVAFVTGGMGGLGAAISRRLHDAGMAVAVSHSERNDHVSTWLMHERDAG-RDFKAYAVDVADFESCERCAEKVLADF  101 (269)
T ss_dssp             -CCCEEEETTTTSHHHHHHHHHHHTTTCEEEEEECSCHHHHHHHHHHHHTTT-CCCEEEECCTTCHHHHHHHHHHHHHHH
T ss_pred             hcCCEEEEECCCchHHHHHHHHHHHCCCEEEEEcCCchHHHHHHHHHHHhcC-CceEEEEecCCCHHHHHHHHHHHHHHc
Confidence            6799999999999999999999999999999998 55555555555555444 478999999999999999999999999


Q ss_pred             CCccEEEEccccCCcccccccCChHHHHHHHHhhhHHHHHHHHHHhhhhhhc-CCeEEEEcCccccccCCCCccchHHHH
Q 044010          124 GRLDHLVNNAGISSVALFEDIVNITDFKQIMNINFWGSVYTTRFAVPHLRYT-KGKIVVLSSAASWLTAPRMSFYNASKA  202 (248)
Q Consensus       124 g~id~vv~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~-~g~iV~isS~~~~~~~~~~~~Y~~sKa  202 (248)
                      |++|++|||||.....++.+ .+.++|++.+++|+.+++.+++.++|.|.++ .|+||++||..+..+.++...|++||+
T Consensus       102 g~id~li~nAg~~~~~~~~~-~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~~~~g~iv~isS~~~~~~~~~~~~Y~asKa  180 (269)
T 3gk3_A          102 GKVDVLINNAGITRDATFMK-MTKGDWDAVMRTDLDAMFNVTKQFIAGMVERRFGRIVNIGSVNGSRGAFGQANYASAKA  180 (269)
T ss_dssp             SCCSEEEECCCCCCCBCTTT-CCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEEECCHHHHHCCTTBHHHHHHHH
T ss_pred             CCCCEEEECCCcCCCcchhh-CCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcCCCEEEEeCChhhccCCCCcchHHHHHH
Confidence            99999999999887666555 5789999999999999999999999998754 489999999999999999999999999


Q ss_pred             HHHHHHHHHHHHhCC-CeEEEEEecCccccCccccccc
Q 044010          203 ALVLFFETLRVELGS-DVGVTIVTPGFIESELTQGKFL  239 (248)
Q Consensus       203 al~~l~~~la~~~~~-~i~v~~v~pg~v~T~~~~~~~~  239 (248)
                      |+++++++++.|+++ +|+||+|+||+++|+|.+....
T Consensus       181 a~~~~~~~la~e~~~~gi~v~~v~PG~v~T~~~~~~~~  218 (269)
T 3gk3_A          181 GIHGFTKTLALETAKRGITVNTVSPGYLATAMVEAVPQ  218 (269)
T ss_dssp             HHHHHHHHHHHHHGGGTEEEEEEEECSBCCTTTTC---
T ss_pred             HHHHHHHHHHHHhhhcCCEEEEEecCcccchhhhhhch
Confidence            999999999999987 4999999999999999876543

>3grk_A Enoyl-(acyl-carrier-protein) reductase (NADH); ssgcid, niaid, structural genomics, seattle structural genomics center for infectious disease; 2.35A {Brucella melitensis} PDB: 4eit_A*

Probab=100.00  E-value=1e-37  Score=267.09  Aligned_cols=191  Identities=23%  Similarity=0.282  Sum_probs=163.9

Q ss_pred             cCCCCCEEEEcCCC--ChHHHHHHHHHHHcCCeEEEEeCCcchHHHHHHHHHhhCCCcEEEEEccCCCHHHHHHHHHHHH
Q 044010           43 EDVSGKVVIITGAS--SGIGEHLAYEYARRGACLALCARREKSLEEVADTAREIGSPDVITIRADVSKVDDCRSLVEETM  120 (248)
Q Consensus        43 ~~~~~k~~lVtGg~--~gIG~aia~~l~~~G~~V~l~~r~~~~~~~~~~~l~~~~~~~v~~~~~D~~~~~~~~~~~~~~~  120 (248)
                      .+++||++|||||+  +|||+++|++|+++|++|++++|+.+..+. .+++.+..+ ++.++.+|++|.++++++++++.
T Consensus        27 ~~l~gk~~lVTGasg~~GIG~aia~~la~~G~~V~~~~r~~~~~~~-~~~~~~~~~-~~~~~~~Dv~d~~~v~~~~~~~~  104 (293)
T 3grk_A           27 GLLQGKRGLILGVANNRSIAWGIAKAAREAGAELAFTYQGDALKKR-VEPLAEELG-AFVAGHCDVADAASIDAVFETLE  104 (293)
T ss_dssp             CTTTTCEEEEECCCSSSSHHHHHHHHHHHTTCEEEEEECSHHHHHH-HHHHHHHHT-CEEEEECCTTCHHHHHHHHHHHH
T ss_pred             ccCCCCEEEEEcCCCCCcHHHHHHHHHHHCCCEEEEEcCCHHHHHH-HHHHHHhcC-CceEEECCCCCHHHHHHHHHHHH
Confidence            46899999999999  559999999999999999999998643333 334433333 68899999999999999999999


Q ss_pred             hHcCCccEEEEccccCCc----ccccccCChHHHHHHHHhhhHHHHHHHHHHhhhhhhcCCeEEEEcCccccccCCCCcc
Q 044010          121 NHFGRLDHLVNNAGISSV----ALFEDIVNITDFKQIMNINFWGSVYTTRFAVPHLRYTKGKIVVLSSAASWLTAPRMSF  196 (248)
Q Consensus       121 ~~~g~id~vv~~ag~~~~----~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~g~iV~isS~~~~~~~~~~~~  196 (248)
                      +++|++|++|||||...+    .++.+ .+.++|++.+++|+.+++.+++++.|.|++ +|+||++||..+..+.+++.+
T Consensus       105 ~~~g~iD~lVnnAG~~~~~~~~~~~~~-~~~~~~~~~~~~N~~g~~~l~~~~~~~m~~-~g~Iv~isS~~~~~~~~~~~~  182 (293)
T 3grk_A          105 KKWGKLDFLVHAIGFSDKDELTGRYID-TSEANFTNTMLISVYSLTAVSRRAEKLMAD-GGSILTLTYYGAEKVMPNYNV  182 (293)
T ss_dssp             HHTSCCSEEEECCCCCCHHHHTSCGGG-CCHHHHHHHHHHHTHHHHHHHHHHHHHTTT-CEEEEEEECGGGTSBCTTTTH
T ss_pred             HhcCCCCEEEECCccCCcccccccccc-cCHHHHHHHHHHHHHHHHHHHHHHHHhccC-CCEEEEEeehhhccCCCchHH
Confidence            999999999999998762    34444 578999999999999999999999999974 789999999999999999999


Q ss_pred             chHHHHHHHHHHHHHHHHhCCC-eEEEEEecCccccCccccc
Q 044010          197 YNASKAALVLFFETLRVELGSD-VGVTIVTPGFIESELTQGK  237 (248)
Q Consensus       197 Y~~sKaal~~l~~~la~~~~~~-i~v~~v~pg~v~T~~~~~~  237 (248)
                      |++||+|+++|+++++.|+++. ||||+|+||+|+|+|....
T Consensus       183 Y~asKaa~~~l~~~la~e~~~~gI~vn~v~PG~v~T~~~~~~  224 (293)
T 3grk_A          183 MGVAKAALEASVKYLAVDLGPQNIRVNAISAGPIKTLAASGI  224 (293)
T ss_dssp             HHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECCCCC------
T ss_pred             HHHHHHHHHHHHHHHHHHHhHhCCEEEEEecCCCcchhhhcc
Confidence            9999999999999999999874 9999999999999997654

>1nff_A Putative oxidoreductase RV2002; directed evolution, GFP, SDR, hydroxysteroid dehydrogenase, structural genomics, PSI; HET: NAD; 1.80A {Mycobacterium tuberculosis} SCOP: c.2.1.2 PDB: 1nfq_A* 1nfr_A*

Probab=100.00  E-value=9.7e-38  Score=262.77  Aligned_cols=188  Identities=24%  Similarity=0.416  Sum_probs=170.2

Q ss_pred             cCCCCCEEEEcCCCChHHHHHHHHHHHcCCeEEEEeCCcchHHHHHHHHHhhCCCcEEEEEccCCCHHHHHHHHHHHHhH
Q 044010           43 EDVSGKVVIITGASSGIGEHLAYEYARRGACLALCARREKSLEEVADTAREIGSPDVITIRADVSKVDDCRSLVEETMNH  122 (248)
Q Consensus        43 ~~~~~k~~lVtGg~~gIG~aia~~l~~~G~~V~l~~r~~~~~~~~~~~l~~~~~~~v~~~~~D~~~~~~~~~~~~~~~~~  122 (248)
                      .++++|++|||||++|||++++++|+++|++|++++|+.++.++..+++..    ++.++.+|++|.++++++++++.++
T Consensus         3 ~~l~~k~vlVTGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~----~~~~~~~D~~~~~~v~~~~~~~~~~   78 (260)
T 1nff_A            3 GRLTGKVALVSGGARGMGASHVRAMVAEGAKVVFGDILDEEGKAMAAELAD----AARYVHLDVTQPAQWKAAVDTAVTA   78 (260)
T ss_dssp             CTTTTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHTGG----GEEEEECCTTCHHHHHHHHHHHHHH
T ss_pred             CCCCCCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHhhc----CceEEEecCCCHHHHHHHHHHHHHH
Confidence            468999999999999999999999999999999999998777666555532    5788999999999999999999999


Q ss_pred             cCCccEEEEccccCCcccccccCChHHHHHHHHhhhHHHHHHHHHHhhhhhhc-CCeEEEEcCccccccCCCCccchHHH
Q 044010          123 FGRLDHLVNNAGISSVALFEDIVNITDFKQIMNINFWGSVYTTRFAVPHLRYT-KGKIVVLSSAASWLTAPRMSFYNASK  201 (248)
Q Consensus       123 ~g~id~vv~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~-~g~iV~isS~~~~~~~~~~~~Y~~sK  201 (248)
                      +|++|++|||||.....++.+ .+.++|++.+++|+.+++++++.+.|.|+++ .|+||++||..+..+.++...|++||
T Consensus        79 ~g~iD~lv~~Ag~~~~~~~~~-~~~~~~~~~~~~N~~g~~~~~~~~~~~~~~~~~g~iv~isS~~~~~~~~~~~~Y~~sK  157 (260)
T 1nff_A           79 FGGLHVLVNNAGILNIGTIED-YALTEWQRILDVNLTGVFLGIRAVVKPMKEAGRGSIINISSIEGLAGTVACHGYTATK  157 (260)
T ss_dssp             HSCCCEEEECCCCCCCBCTTT-SCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEEECCGGGTSCCTTBHHHHHHH
T ss_pred             cCCCCEEEECCCCCCCCChhh-CCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcCCCEEEEEeehhhcCCCCCchhHHHHH
Confidence            999999999999876655555 5789999999999999999999999998754 48999999999999988899999999


Q ss_pred             HHHHHHHHHHHHHhCC-CeEEEEEecCccccCccc
Q 044010          202 AALVLFFETLRVELGS-DVGVTIVTPGFIESELTQ  235 (248)
Q Consensus       202 aal~~l~~~la~~~~~-~i~v~~v~pg~v~T~~~~  235 (248)
                      +++++++++++.|+++ +|+||+|+||+++|++..
T Consensus       158 ~a~~~~~~~la~e~~~~gi~v~~v~Pg~v~t~~~~  192 (260)
T 1nff_A          158 FAVRGLTKSTALELGPSGIRVNSIHPGLVKTPMTD  192 (260)
T ss_dssp             HHHHHHHHHHHHHHGGGTEEEEEEEECCBCSGGGT
T ss_pred             HHHHHHHHHHHHHhCccCcEEEEEEeCCCCCCccc
Confidence            9999999999999987 599999999999999865

>2d1y_A Hypothetical protein TT0321; strucrtural genomics, thermus thermophilus HB8, structural genomics, NPPSFA; HET: NAD; 1.65A {Thermus thermophilus} SCOP: c.2.1.2

Probab=100.00  E-value=8.2e-38  Score=262.49  Aligned_cols=186  Identities=30%  Similarity=0.473  Sum_probs=168.1

Q ss_pred             cCCCCCEEEEcCCCChHHHHHHHHHHHcCCeEEEEeCCcchHHHHHHHHHhhCCCcEEEEEccCCCHHHHHHHHHHHHhH
Q 044010           43 EDVSGKVVIITGASSGIGEHLAYEYARRGACLALCARREKSLEEVADTAREIGSPDVITIRADVSKVDDCRSLVEETMNH  122 (248)
Q Consensus        43 ~~~~~k~~lVtGg~~gIG~aia~~l~~~G~~V~l~~r~~~~~~~~~~~l~~~~~~~v~~~~~D~~~~~~~~~~~~~~~~~  122 (248)
                      +++++|++|||||++|||++++++|+++|++|++++|+.++ ++..+++.     + .++.+|++|.++++++++++.++
T Consensus         2 ~~l~~k~vlVTGas~gIG~~ia~~l~~~G~~V~~~~r~~~~-~~~~~~~~-----~-~~~~~D~~~~~~~~~~~~~~~~~   74 (256)
T 2d1y_A            2 GLFAGKGVLVTGGARGIGRAIAQAFAREGALVALCDLRPEG-KEVAEAIG-----G-AFFQVDLEDERERVRFVEEAAYA   74 (256)
T ss_dssp             CTTTTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESSTTH-HHHHHHHT-----C-EEEECCTTCHHHHHHHHHHHHHH
T ss_pred             CCCCCCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEeCChhH-HHHHHHhh-----C-CEEEeeCCCHHHHHHHHHHHHHH
Confidence            46889999999999999999999999999999999999876 55555543     4 78899999999999999999999


Q ss_pred             cCCccEEEEccccCCcccccccCChHHHHHHHHhhhHHHHHHHHHHhhhhhhcC-CeEEEEcCccccccCCCCccchHHH
Q 044010          123 FGRLDHLVNNAGISSVALFEDIVNITDFKQIMNINFWGSVYTTRFAVPHLRYTK-GKIVVLSSAASWLTAPRMSFYNASK  201 (248)
Q Consensus       123 ~g~id~vv~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~-g~iV~isS~~~~~~~~~~~~Y~~sK  201 (248)
                      +|++|++|||||.....++.+ .+.++|++.+++|+.+++++++++.|.|++++ |+||++||..+..+.++...|++||
T Consensus        75 ~g~iD~lv~~Ag~~~~~~~~~-~~~~~~~~~~~~N~~g~~~~~~~~~~~m~~~~~g~iv~isS~~~~~~~~~~~~Y~~sK  153 (256)
T 2d1y_A           75 LGRVDVLVNNAAIAAPGSALT-VRLPEWRRVLEVNLTAPMHLSALAAREMRKVGGGAIVNVASVQGLFAEQENAAYNASK  153 (256)
T ss_dssp             HSCCCEEEECCCCCCCBCTTT-CCHHHHHHHHHHHTHHHHHHHHHHHHHHHTTTCEEEEEECCGGGTSBCTTBHHHHHHH
T ss_pred             cCCCCEEEECCCCCCCCChhh-CCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcCCcEEEEEccccccCCCCCChhHHHHH
Confidence            999999999999876665555 57899999999999999999999999997654 8999999999999989999999999


Q ss_pred             HHHHHHHHHHHHHhCC-CeEEEEEecCccccCcccc
Q 044010          202 AALVLFFETLRVELGS-DVGVTIVTPGFIESELTQG  236 (248)
Q Consensus       202 aal~~l~~~la~~~~~-~i~v~~v~pg~v~T~~~~~  236 (248)
                      +++++++++++.|+++ +||||+|+||+++|++...
T Consensus       154 ~a~~~~~~~la~e~~~~gi~v~~v~Pg~v~t~~~~~  189 (256)
T 2d1y_A          154 GGLVNLTRSLALDLAPLRIRVNAVAPGAIATEAVLE  189 (256)
T ss_dssp             HHHHHHHHHHHHHHGGGTEEEEEEEECSBCCHHHHH
T ss_pred             HHHHHHHHHHHHHHhhcCeEEEEEeeCCccCchhhh
Confidence            9999999999999987 4999999999999998654

>2p91_A Enoyl-[acyl-carrier-protein] reductase [NADH]; NADH-dependent enoyl-ACP reductase, FABI, aquifex A VF5, structural genomics, PSI; 2.00A {Aquifex aeolicus}

Probab=100.00  E-value=1.7e-37  Score=264.41  Aligned_cols=190  Identities=23%  Similarity=0.283  Sum_probs=168.4

Q ss_pred             CCCCCEEEEcCCC--ChHHHHHHHHHHHcCCeEEEEeCCcchHHHHHHHHHhhCCCcEEEEEccCCCHHHHHHHHHHHHh
Q 044010           44 DVSGKVVIITGAS--SGIGEHLAYEYARRGACLALCARREKSLEEVADTAREIGSPDVITIRADVSKVDDCRSLVEETMN  121 (248)
Q Consensus        44 ~~~~k~~lVtGg~--~gIG~aia~~l~~~G~~V~l~~r~~~~~~~~~~~l~~~~~~~v~~~~~D~~~~~~~~~~~~~~~~  121 (248)
                      +++||++|||||+  +|||+++|++|+++|++|++++|+.+ .++..+++.+..+ .+.++.+|++|.++++++++++.+
T Consensus        18 ~l~~k~vlVTGas~~~gIG~~ia~~l~~~G~~V~~~~r~~~-~~~~~~~l~~~~~-~~~~~~~Dl~~~~~v~~~~~~~~~   95 (285)
T 2p91_A           18 LLEGKRALITGVANERSIAYGIAKSFHREGAQLAFTYATPK-LEKRVREIAKGFG-SDLVVKCDVSLDEDIKNLKKFLEE   95 (285)
T ss_dssp             TTTTCEEEECCCSSTTSHHHHHHHHHHHTTCEEEEEESSGG-GHHHHHHHHHHTT-CCCEEECCTTCHHHHHHHHHHHHH
T ss_pred             ccCCCEEEEECCCCCCcHHHHHHHHHHHcCCEEEEEeCCHH-HHHHHHHHHHhcC-CeEEEEcCCCCHHHHHHHHHHHHH
Confidence            4899999999999  99999999999999999999999875 5555566655443 367899999999999999999999


Q ss_pred             HcCCccEEEEccccCCc----ccccccCChHHHHHHHHhhhHHHHHHHHHHhhhhhhcCCeEEEEcCccccccCCCCccc
Q 044010          122 HFGRLDHLVNNAGISSV----ALFEDIVNITDFKQIMNINFWGSVYTTRFAVPHLRYTKGKIVVLSSAASWLTAPRMSFY  197 (248)
Q Consensus       122 ~~g~id~vv~~ag~~~~----~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~g~iV~isS~~~~~~~~~~~~Y  197 (248)
                      ++|++|++|||||....    .++.+ .+.++|++.+++|+.+++.+++.+.|.|.+++|+||++||..+..+.++..+|
T Consensus        96 ~~g~iD~lv~~Ag~~~~~~~~~~~~~-~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~~g~iv~isS~~~~~~~~~~~~Y  174 (285)
T 2p91_A           96 NWGSLDIIVHSIAYAPKEEFKGGVID-TSREGFKIAMDISVYSLIALTRELLPLMEGRNGAIVTLSYYGAEKVVPHYNVM  174 (285)
T ss_dssp             HTSCCCEEEECCCCCCGGGGSSCGGG-CCHHHHHHHHHHHTHHHHHHHHHHGGGGTTSCCEEEEEECGGGTSBCTTTTHH
T ss_pred             HcCCCCEEEECCCCCCcccCCCCccc-CCHHHHHHHHHHhhHHHHHHHHHHHHHHHHcCCEEEEEccchhccCCCCccHH
Confidence            99999999999998754    33434 57899999999999999999999999997667999999999999998999999


Q ss_pred             hHHHHHHHHHHHHHHHHhCC-CeEEEEEecCccccCcccc
Q 044010          198 NASKAALVLFFETLRVELGS-DVGVTIVTPGFIESELTQG  236 (248)
Q Consensus       198 ~~sKaal~~l~~~la~~~~~-~i~v~~v~pg~v~T~~~~~  236 (248)
                      ++||+++++++++++.|+++ +|+||+|+||+++|++.+.
T Consensus       175 ~~sK~a~~~~~~~la~e~~~~gi~v~~v~PG~v~t~~~~~  214 (285)
T 2p91_A          175 GIAKAALESTVRYLAYDIAKHGHRINAISAGPVKTLAAYS  214 (285)
T ss_dssp             HHHHHHHHHHHHHHHHHHHTTTCEEEEEEECCCCCSCC--
T ss_pred             HHHHHHHHHHHHHHHHHhcccCcEEEEEEeCcccCchhhc
Confidence            99999999999999999977 4999999999999998754

>3o26_A Salutaridine reductase; short chain dehydrogenase/reductases, oxidoreductase; HET: NDP; 1.91A {Papaver somniferum} SCOP: c.2.1.0

Probab=100.00  E-value=8.5e-38  Score=268.11  Aligned_cols=193  Identities=25%  Similarity=0.372  Sum_probs=169.4

Q ss_pred             cCCCCCEEEEcCCCChHHHHHHHHHHHcCCeEEEEeCCcchHHHHHHHHHhhCCCcEEEEEccCCCH-HHHHHHHHHHHh
Q 044010           43 EDVSGKVVIITGASSGIGEHLAYEYARRGACLALCARREKSLEEVADTAREIGSPDVITIRADVSKV-DDCRSLVEETMN  121 (248)
Q Consensus        43 ~~~~~k~~lVtGg~~gIG~aia~~l~~~G~~V~l~~r~~~~~~~~~~~l~~~~~~~v~~~~~D~~~~-~~~~~~~~~~~~  121 (248)
                      ..+++|++|||||++|||+++|++|+++|++|++++|+.++.++..+++++.++.++.++.+|++|. ++++++++++.+
T Consensus         8 ~~~~~k~vlITGas~GIG~~~a~~L~~~G~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~Dl~~~~~~v~~~~~~~~~   87 (311)
T 3o26_A            8 TVTKRRCAVVTGGNKGIGFEICKQLSSNGIMVVLTCRDVTKGHEAVEKLKNSNHENVVFHQLDVTDPIATMSSLADFIKT   87 (311)
T ss_dssp             ----CCEEEESSCSSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHTTTCCSEEEEECCTTSCHHHHHHHHHHHHH
T ss_pred             ccCCCcEEEEecCCchHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcCCCceEEEEccCCCcHHHHHHHHHHHHH
Confidence            3568999999999999999999999999999999999999999999999887766899999999998 999999999999


Q ss_pred             HcCCccEEEEccccCCcc------------------------------cccccCChHHHHHHHHhhhHHHHHHHHHHhhh
Q 044010          122 HFGRLDHLVNNAGISSVA------------------------------LFEDIVNITDFKQIMNINFWGSVYTTRFAVPH  171 (248)
Q Consensus       122 ~~g~id~vv~~ag~~~~~------------------------------~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~  171 (248)
                      ++|++|++|||||+....                              ...+ .+.+++++.+++|+.|++.+++.++|.
T Consensus        88 ~~g~iD~lv~nAg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~N~~g~~~l~~~~~~~  166 (311)
T 3o26_A           88 HFGKLDILVNNAGVAGFSVDADRFKAMISDIGEDSEELVKIYEKPEAQELMS-ETYELAEECLKINYNGVKSVTEVLIPL  166 (311)
T ss_dssp             HHSSCCEEEECCCCCSCEECHHHHHHHHHHHCSSTTHHHHHTTSHHHHTTEE-CCHHHHHHHHHHHTHHHHHHHHHHHHH
T ss_pred             hCCCCCEEEECCcccccccccchhhhcccccccchhhcchhhcccchhcccc-cchhhhhhheeeeeehHHHHHHHhhHh
Confidence            999999999999987431                              1222 467899999999999999999999999


Q ss_pred             hhhcC-CeEEEEcCccccccC-------------------------------------------CCCccchHHHHHHHHH
Q 044010          172 LRYTK-GKIVVLSSAASWLTA-------------------------------------------PRMSFYNASKAALVLF  207 (248)
Q Consensus       172 ~~~~~-g~iV~isS~~~~~~~-------------------------------------------~~~~~Y~~sKaal~~l  207 (248)
                      |++++ |+||++||..+..+.                                           ++..+|++||+|++++
T Consensus       167 l~~~~~~~IV~isS~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~SK~a~~~~  246 (311)
T 3o26_A          167 LQLSDSPRIVNVSSSTGSLKYVSNETALEILGDGDALTEERIDMVVNMLLKDFKENLIETNGWPSFGAAYTTSKACLNAY  246 (311)
T ss_dssp             HTTSSSCEEEEECCGGGSGGGCCCHHHHHHHHCGGGCCHHHHHHHHHHHHHHHHTTCTTTTTCCSSCHHHHHHHHHHHHH
T ss_pred             hccCCCCeEEEEecCCcccccccchhhhhhhccccccchhHHHHHHHHHHhhhhccccccccCcccchhhHHHHHHHHHH
Confidence            87544 899999999887553                                           3557899999999999


Q ss_pred             HHHHHHHhCCCeEEEEEecCccccCccccc
Q 044010          208 FETLRVELGSDVGVTIVTPGFIESELTQGK  237 (248)
Q Consensus       208 ~~~la~~~~~~i~v~~v~pg~v~T~~~~~~  237 (248)
                      ++++++++++ |+||+|+||+|+|+|.+..
T Consensus       247 ~~~la~e~~~-i~v~~v~PG~v~T~~~~~~  275 (311)
T 3o26_A          247 TRVLANKIPK-FQVNCVCPGLVKTEMNYGI  275 (311)
T ss_dssp             HHHHHHHCTT-SEEEEECCCSBCSGGGTTC
T ss_pred             HHHHHhhcCC-ceEEEecCCceecCCcCCC
Confidence            9999999964 9999999999999998754

>1hxh_A 3BETA/17BETA-hydroxysteroid dehydrogenase; alpha-beta, rossmann fold, short-chain dehydrogenase, oxidoreductase; 1.22A {Comamonas testosteroni} SCOP: c.2.1.2

Probab=100.00  E-value=6.2e-38  Score=262.81  Aligned_cols=188  Identities=27%  Similarity=0.384  Sum_probs=171.1

Q ss_pred             CCCCCEEEEcCCCChHHHHHHHHHHHcCCeEEEEeCCcchHHHHHHHHHhhCCCcEEEEEccCCCHHHHHHHHHHHHhHc
Q 044010           44 DVSGKVVIITGASSGIGEHLAYEYARRGACLALCARREKSLEEVADTAREIGSPDVITIRADVSKVDDCRSLVEETMNHF  123 (248)
Q Consensus        44 ~~~~k~~lVtGg~~gIG~aia~~l~~~G~~V~l~~r~~~~~~~~~~~l~~~~~~~v~~~~~D~~~~~~~~~~~~~~~~~~  123 (248)
                      ++++|++|||||++|||++++++|+++|++|++++|+.++.++..+++   + .++.++.+|++|.++++++++++.+++
T Consensus         3 ~l~~k~vlVTGas~giG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~---~-~~~~~~~~D~~~~~~v~~~~~~~~~~~   78 (253)
T 1hxh_A            3 RLQGKVALVTGGASGVGLEVVKLLLGEGAKVAFSDINEAAGQQLAAEL---G-ERSMFVRHDVSSEADWTLVMAAVQRRL   78 (253)
T ss_dssp             TTTTCEEEETTTTSHHHHHHHHHHHHTTCEEEEECSCHHHHHHHHHHH---C-TTEEEECCCTTCHHHHHHHHHHHHHHH
T ss_pred             CCCCCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHc---C-CceEEEEccCCCHHHHHHHHHHHHHHc
Confidence            688999999999999999999999999999999999987777666555   2 378899999999999999999999999


Q ss_pred             CCccEEEEccccCCcccccccCChHHHHHHHHhhhHHHHHHHHHHhhhhhhcCCeEEEEcCccccccCCCCccchHHHHH
Q 044010          124 GRLDHLVNNAGISSVALFEDIVNITDFKQIMNINFWGSVYTTRFAVPHLRYTKGKIVVLSSAASWLTAPRMSFYNASKAA  203 (248)
Q Consensus       124 g~id~vv~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~g~iV~isS~~~~~~~~~~~~Y~~sKaa  203 (248)
                      |++|++|||||.....++.+ .+.++|++.+++|+.+++.+++.++|.|++.+|+||++||..+..+.++...|++||++
T Consensus        79 g~id~lv~~Ag~~~~~~~~~-~~~~~~~~~~~~N~~~~~~~~~~~~~~~~~~~g~iv~isS~~~~~~~~~~~~Y~~sK~a  157 (253)
T 1hxh_A           79 GTLNVLVNNAGILLPGDMET-GRLEDFSRLLKINTESVFIGCQQGIAAMKETGGSIINMASVSSWLPIEQYAGYSASKAA  157 (253)
T ss_dssp             CSCCEEEECCCCCCCBCTTT-CCHHHHHHHHHHHTHHHHHHHHHHHHHHTTTCEEEEEECCGGGTSCCTTBHHHHHHHHH
T ss_pred             CCCCEEEECCCCCCCCCccc-CCHHHHHHHHHhhcHHHHHHHHHHHHHHHHcCCEEEEEcchhhcCCCCCCccHHHHHHH
Confidence            99999999999876655555 57899999999999999999999999997666999999999999998999999999999


Q ss_pred             HHHHHHHHHHHhCC---CeEEEEEecCccccCcccc
Q 044010          204 LVLFFETLRVELGS---DVGVTIVTPGFIESELTQG  236 (248)
Q Consensus       204 l~~l~~~la~~~~~---~i~v~~v~pg~v~T~~~~~  236 (248)
                      +++++++++.|+++   +||||+|+||+++|++...
T Consensus       158 ~~~~~~~la~e~~~~~~gi~v~~v~Pg~v~t~~~~~  193 (253)
T 1hxh_A          158 VSALTRAAALSCRKQGYAIRVNSIHPDGIYTPMMQA  193 (253)
T ss_dssp             HHHHHHHHHHHHHHHTCCEEEEEEEESEECCHHHHH
T ss_pred             HHHHHHHHHHHhhhcCCCeEEEEEEeCCccCchhhh
Confidence            99999999999854   6999999999999998654

>2nwq_A Probable short-chain dehydrogenase; oxidoreductase; 2.30A {Pseudomonas aeruginosa}

Probab=100.00  E-value=5.8e-38  Score=265.93  Aligned_cols=191  Identities=31%  Similarity=0.455  Sum_probs=165.3

Q ss_pred             ccCCCCCEEEEcCCCChHHHHHHHHHHHcCCeEEEEeCCcchHHHHHHHHHhhCCCcEEEEEccCCCHHHHHHHHHHHHh
Q 044010           42 SEDVSGKVVIITGASSGIGEHLAYEYARRGACLALCARREKSLEEVADTAREIGSPDVITIRADVSKVDDCRSLVEETMN  121 (248)
Q Consensus        42 ~~~~~~k~~lVtGg~~gIG~aia~~l~~~G~~V~l~~r~~~~~~~~~~~l~~~~~~~v~~~~~D~~~~~~~~~~~~~~~~  121 (248)
                      ..+|+ |++|||||++|||+++|++|+++|++|++++|+.+++++..+++.+.  .++.++.+|++|.++++++++++.+
T Consensus        17 ~~~~~-k~vlVTGas~gIG~aia~~La~~G~~V~~~~r~~~~~~~~~~~~~~~--~~~~~~~~Dv~d~~~v~~~~~~~~~   93 (272)
T 2nwq_A           17 GSHMS-STLFITGATSGFGEACARRFAEAGWSLVLTGRREERLQALAGELSAK--TRVLPLTLDVRDRAAMSAAVDNLPE   93 (272)
T ss_dssp             ----C-CEEEESSTTTSSHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHTTT--SCEEEEECCTTCHHHHHHHHHTCCG
T ss_pred             CCCcC-cEEEEeCCCCHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHhhcC--CcEEEEEcCCCCHHHHHHHHHHHHH
Confidence            35777 99999999999999999999999999999999988888777777543  3788999999999999999999999


Q ss_pred             HcCCccEEEEccccCCc-ccccccCChHHHHHHHHhhhHHHHHHHHHHhhhhhhc-CC-eEEEEcCccccccCCCCccch
Q 044010          122 HFGRLDHLVNNAGISSV-ALFEDIVNITDFKQIMNINFWGSVYTTRFAVPHLRYT-KG-KIVVLSSAASWLTAPRMSFYN  198 (248)
Q Consensus       122 ~~g~id~vv~~ag~~~~-~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~-~g-~iV~isS~~~~~~~~~~~~Y~  198 (248)
                      ++|++|++|||||.... .++.+ .+.++|++.+++|+.+++.+++.++|.|.++ .| +||++||..+..+.++...|+
T Consensus        94 ~~g~iD~lvnnAG~~~~~~~~~~-~~~~~~~~~~~vN~~g~~~~~~~~~~~m~~~~~g~~IV~isS~~~~~~~~~~~~Y~  172 (272)
T 2nwq_A           94 EFATLRGLINNAGLALGTDPAQS-CDLDDWDTMVDTNIKGLLYSTRLLLPRLIAHGAGASIVNLGSVAGKWPYPGSHVYG  172 (272)
T ss_dssp             GGSSCCEEEECCCCCCCCCCGGG-CCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHCTTCEEEEECCGGGTSCCTTCHHHH
T ss_pred             HhCCCCEEEECCCCCCCCCCccc-CCHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCcEEEEeCCchhccCCCCCchHH
Confidence            99999999999998754 44444 5789999999999999999999999999754 47 999999999999988999999


Q ss_pred             HHHHHHHHHHHHHHHHhCCC-eEEEEEecCccccCcccc
Q 044010          199 ASKAALVLFFETLRVELGSD-VGVTIVTPGFIESELTQG  236 (248)
Q Consensus       199 ~sKaal~~l~~~la~~~~~~-i~v~~v~pg~v~T~~~~~  236 (248)
                      +||+++++++++++.|+++. ||||+|+||+++|+|...
T Consensus       173 asKaa~~~l~~~la~el~~~gIrvn~v~PG~v~T~~~~~  211 (272)
T 2nwq_A          173 GTKAFVEQFSLNLRCDLQGTGVRVTNLEPGLCESEFSLV  211 (272)
T ss_dssp             HHHHHHHHHHHHHHTTCTTSCCEEEEEEECSBC------
T ss_pred             HHHHHHHHHHHHHHHHhCccCeEEEEEEcCCCcCcchhc
Confidence            99999999999999999874 999999999999999754

>1mxh_A Pteridine reductase 2; SDR topology, protein-substrate complex, oxidoreductase; HET: NAP DHF; 2.20A {Trypanosoma cruzi} SCOP: c.2.1.2 PDB: 1mxf_A*

Probab=100.00  E-value=1.2e-37  Score=263.83  Aligned_cols=189  Identities=21%  Similarity=0.272  Sum_probs=165.3

Q ss_pred             cCCCCCEEEEcCCCChHHHHHHHHHHHcCCeEEEEeC-CcchHHHHHHHHHhhCCCcEEEEEccCCCH----HHHHHHHH
Q 044010           43 EDVSGKVVIITGASSGIGEHLAYEYARRGACLALCAR-REKSLEEVADTAREIGSPDVITIRADVSKV----DDCRSLVE  117 (248)
Q Consensus        43 ~~~~~k~~lVtGg~~gIG~aia~~l~~~G~~V~l~~r-~~~~~~~~~~~l~~~~~~~v~~~~~D~~~~----~~~~~~~~  117 (248)
                      .+|++|++|||||++|||++++++|+++|++|++++| +.++.++..+++++..+.++.++.+|++|.    ++++++++
T Consensus         7 ~~~~~k~~lVTGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~   86 (276)
T 1mxh_A            7 EASECPAAVITGGARRIGHSIAVRLHQQGFRVVVHYRHSEGAAQRLVAELNAARAGSAVLCKGDLSLSSSLLDCCEDIID   86 (276)
T ss_dssp             ----CCEEEETTCSSHHHHHHHHHHHHTTCEEEEEESSCHHHHHHHHHHHHHHSTTCEEEEECCCSSSTTHHHHHHHHHH
T ss_pred             hccCCCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEeCCChHHHHHHHHHHHHhcCCceEEEeccCCCccccHHHHHHHHH
Confidence            3678999999999999999999999999999999999 888888888888766334789999999999    99999999


Q ss_pred             HHHhHcCCccEEEEccccCCcccccccCCh-----------HHHHHHHHhhhHHHHHHHHHHhhhhhhcC------CeEE
Q 044010          118 ETMNHFGRLDHLVNNAGISSVALFEDIVNI-----------TDFKQIMNINFWGSVYTTRFAVPHLRYTK------GKIV  180 (248)
Q Consensus       118 ~~~~~~g~id~vv~~ag~~~~~~~~~~~~~-----------~~~~~~~~~n~~~~~~l~~~~~~~~~~~~------g~iV  180 (248)
                      ++.+++|++|++|||||.....++.+ .+.           ++|++.+++|+.+++++++++.|.|.+..      |+||
T Consensus        87 ~~~~~~g~id~lv~nAg~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~~~~~~~~g~iv  165 (276)
T 1mxh_A           87 CSFRAFGRCDVLVNNASAYYPTPLLP-GDDTNGAADAKPIDAQVAELFGSNAVAPLFLIRAFARRQGEGGAWRSRNLSVV  165 (276)
T ss_dssp             HHHHHHSCCCEEEECCCCCCCCCSCC------------CHHHHHHHHHHHHTHHHHHHHHHHHHTC-------CCCEEEE
T ss_pred             HHHHhcCCCCEEEECCCCCCCCCccc-cCcccccccccchHHHHHHHHHhccHHHHHHHHHHHHHHhcCCCCCCCCcEEE
Confidence            99999999999999999876555544 455           89999999999999999999999986334      8999


Q ss_pred             EEcCccccccCCCCccchHHHHHHHHHHHHHHHHhCC-CeEEEEEecCccccC
Q 044010          181 VLSSAASWLTAPRMSFYNASKAALVLFFETLRVELGS-DVGVTIVTPGFIESE  232 (248)
Q Consensus       181 ~isS~~~~~~~~~~~~Y~~sKaal~~l~~~la~~~~~-~i~v~~v~pg~v~T~  232 (248)
                      ++||..+..+.++...|++||+++++|+++++.|+++ +||||+|+||+++|+
T Consensus       166 ~isS~~~~~~~~~~~~Y~asK~a~~~l~~~la~e~~~~gi~v~~v~PG~v~t~  218 (276)
T 1mxh_A          166 NLCDAMTDLPLPGFCVYTMAKHALGGLTRAAALELAPRHIRVNAVAPGLSLLP  218 (276)
T ss_dssp             EECCGGGGSCCTTCHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEESSBSCC
T ss_pred             EECchhhcCCCCCCeehHHHHHHHHHHHHHHHHHHhhcCeEEEEEecCcccCC
Confidence            9999999999999999999999999999999999987 499999999999999

>3nrc_A Enoyl-[acyl-carrier-protein] reductase (NADH); rossmann fold, NADH BI oxidoreductase; HET: NAD TCL; 2.10A {Francisella tularensis subsp} PDB: 3uic_A* 2jjy_A*

Probab=100.00  E-value=1.4e-37  Score=264.48  Aligned_cols=193  Identities=20%  Similarity=0.226  Sum_probs=172.3

Q ss_pred             cCCCCCEEEEcCCC--ChHHHHHHHHHHHcCCeEEEEeCCcchHHHHHHHHHhhCCCcEEEEEccCCCHHHHHHHHHHHH
Q 044010           43 EDVSGKVVIITGAS--SGIGEHLAYEYARRGACLALCARREKSLEEVADTAREIGSPDVITIRADVSKVDDCRSLVEETM  120 (248)
Q Consensus        43 ~~~~~k~~lVtGg~--~gIG~aia~~l~~~G~~V~l~~r~~~~~~~~~~~l~~~~~~~v~~~~~D~~~~~~~~~~~~~~~  120 (248)
                      .++++|++|||||+  +|||+++|++|+++|++|++++|+.  .++..+++.+..+ ++.++.+|++|.++++++++++.
T Consensus        22 ~~l~~k~vlVTGasg~~GIG~~ia~~l~~~G~~V~~~~r~~--~~~~~~~l~~~~~-~~~~~~~Dl~~~~~v~~~~~~~~   98 (280)
T 3nrc_A           22 GFLAGKKILITGLLSNKSIAYGIAKAMHREGAELAFTYVGQ--FKDRVEKLCAEFN-PAAVLPCDVISDQEIKDLFVELG   98 (280)
T ss_dssp             CTTTTCEEEECCCCSTTCHHHHHHHHHHHTTCEEEEEECTT--CHHHHHHHHGGGC-CSEEEECCTTCHHHHHHHHHHHH
T ss_pred             cccCCCEEEEECCCCCCCHHHHHHHHHHHcCCEEEEeeCch--HHHHHHHHHHhcC-CceEEEeecCCHHHHHHHHHHHH
Confidence            46899999999988  7799999999999999999999987  3455566655554 58899999999999999999999


Q ss_pred             hHcCCccEEEEccccCCc----ccccccCChHHHHHHHHhhhHHHHHHHHHHhhhhhhcCCeEEEEcCccccccCCCCcc
Q 044010          121 NHFGRLDHLVNNAGISSV----ALFEDIVNITDFKQIMNINFWGSVYTTRFAVPHLRYTKGKIVVLSSAASWLTAPRMSF  196 (248)
Q Consensus       121 ~~~g~id~vv~~ag~~~~----~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~g~iV~isS~~~~~~~~~~~~  196 (248)
                      +++|++|++|||||....    .++.+..+.++|++.+++|+.+++.+++++.|.|.+++|+||++||.++..+.++...
T Consensus        99 ~~~g~id~li~nAg~~~~~~~~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~~~g~iv~isS~~~~~~~~~~~~  178 (280)
T 3nrc_A           99 KVWDGLDAIVHSIAFAPRDQLEGNFIDCVTREGFSIAHDISAYSFAALAKEGRSMMKNRNASMVALTYIGAEKAMPSYNT  178 (280)
T ss_dssp             HHCSSCCEEEECCCCCCGGGSSSCHHHHCCHHHHHHHHHHHTHHHHHHHHHHHHHHTTTTCEEEEEECGGGTSCCTTTHH
T ss_pred             HHcCCCCEEEECCccCCCcccCCccccccCHHHHHHHHHHHHHHHHHHHHHHHHHhhcCCCeEEEEeccccccCCCCchh
Confidence            999999999999998764    3333325789999999999999999999999999877899999999999999999999


Q ss_pred             chHHHHHHHHHHHHHHHHhCCC-eEEEEEecCccccCcccccc
Q 044010          197 YNASKAALVLFFETLRVELGSD-VGVTIVTPGFIESELTQGKF  238 (248)
Q Consensus       197 Y~~sKaal~~l~~~la~~~~~~-i~v~~v~pg~v~T~~~~~~~  238 (248)
                      |++||+|+++++++++.|+++. |+||+|+||+|+|+|.+...
T Consensus       179 Y~asKaal~~~~~~la~e~~~~gi~v~~v~PG~v~T~~~~~~~  221 (280)
T 3nrc_A          179 MGVAKASLEATVRYTALALGEDGIKVNAVSAGPIKTLAASGIS  221 (280)
T ss_dssp             HHHHHHHHHHHHHHHHHHHGGGTCEEEEEEECCCCCSGGGGCT
T ss_pred             hHHHHHHHHHHHHHHHHHHHHcCcEEEEEeeccccchhhhcCc
Confidence            9999999999999999999874 99999999999999987653

>2x9g_A PTR1, pteridine reductase; short chain dehydrogenase, oxidoreductase; HET: NAP LYA; 1.10A {Trypanosoma brucei brucei} PDB: 2x9n_A* 2x9v_A* 3bmc_A* 3bmd_A* 3bme_A* 3bmf_A* 3bmg_A* 3bmh_A* 3bmi_A* 3bmj_A* 3bmk_A* 3bml_A* 3bmm_A* 3bmn_A* 3bmo_A* 3bmq_A* 3bmr_A* 3gn1_A* 3gn2_A* 3jq6_A* ...

Probab=100.00  E-value=1.4e-37  Score=265.27  Aligned_cols=191  Identities=23%  Similarity=0.274  Sum_probs=167.8

Q ss_pred             cCCCCCEEEEcCCCChHHHHHHHHHHHcCCeEEEEeCCc-chHHHHHHHHHhhCCCcEEEEEccCCC----HHHHHHHHH
Q 044010           43 EDVSGKVVIITGASSGIGEHLAYEYARRGACLALCARRE-KSLEEVADTAREIGSPDVITIRADVSK----VDDCRSLVE  117 (248)
Q Consensus        43 ~~~~~k~~lVtGg~~gIG~aia~~l~~~G~~V~l~~r~~-~~~~~~~~~l~~~~~~~v~~~~~D~~~----~~~~~~~~~  117 (248)
                      .++++|++|||||++|||+++|++|+++|++|++++|+. ++.++..++++...+.++.++.+|++|    .++++++++
T Consensus        19 ~~l~~k~~lVTGas~gIG~aia~~L~~~G~~V~~~~r~~~~~~~~~~~~l~~~~~~~~~~~~~Dv~~~~~~~~~v~~~~~   98 (288)
T 2x9g_A           19 SHMEAPAAVVTGAAKRIGRAIAVKLHQTGYRVVIHYHNSAEAAVSLADELNKERSNTAVVCQADLTNSNVLPASCEEIIN   98 (288)
T ss_dssp             ---CCCEEEETTCSSHHHHHHHHHHHHHTCEEEEEESSCHHHHHHHHHHHHHHSTTCEEEEECCCSCSTTHHHHHHHHHH
T ss_pred             cCCCCCEEEEeCCCCHHHHHHHHHHHHCCCeEEEEeCCchHHHHHHHHHHHhhcCCceEEEEeecCCccCCHHHHHHHHH
Confidence            468999999999999999999999999999999999998 788888887763334578999999999    999999999


Q ss_pred             HHHhHcCCccEEEEccccCCccccc----cc-----CChHHHHHHHHhhhHHHHHHHHHHhhhhhhc-------CCeEEE
Q 044010          118 ETMNHFGRLDHLVNNAGISSVALFE----DI-----VNITDFKQIMNINFWGSVYTTRFAVPHLRYT-------KGKIVV  181 (248)
Q Consensus       118 ~~~~~~g~id~vv~~ag~~~~~~~~----~~-----~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~-------~g~iV~  181 (248)
                      ++.+++|++|++|||||.....++.    ..     .+.++|++.+++|+.+++.+++.+.|.|.++       .|+||+
T Consensus        99 ~~~~~~g~iD~lvnnAG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~~~~~~~~~g~iv~  178 (288)
T 2x9g_A           99 SCFRAFGRCDVLVNNASAFYPTPLVQGDHEDNSNGKTVETQVAELIGTNAIAPFLLTMSFAQRQKGTNPNCTSSNLSIVN  178 (288)
T ss_dssp             HHHHHHSCCCEEEECCCCCCCCCSCCC--------CCHHHHHHHHHHHHTHHHHHHHHHHHHHC--------CCCEEEEE
T ss_pred             HHHHhcCCCCEEEECCCCCCCCccccccchhcccccCCHHHHHHHHHHhhHHHHHHHHHHHHHHhhcCCCCCCCCeEEEE
Confidence            9999999999999999987655441    22     4568999999999999999999999998653       579999


Q ss_pred             EcCccccccCCCCccchHHHHHHHHHHHHHHHHhCC-CeEEEEEecCccccCc
Q 044010          182 LSSAASWLTAPRMSFYNASKAALVLFFETLRVELGS-DVGVTIVTPGFIESEL  233 (248)
Q Consensus       182 isS~~~~~~~~~~~~Y~~sKaal~~l~~~la~~~~~-~i~v~~v~pg~v~T~~  233 (248)
                      +||..+..+.++..+|++||+|+++|+++++.|+++ +||||+|+||+++|+|
T Consensus       179 isS~~~~~~~~~~~~Y~asKaa~~~l~~~la~e~~~~gI~vn~v~PG~v~t~~  231 (288)
T 2x9g_A          179 LCDAMVDQPCMAFSLYNMGKHALVGLTQSAALELAPYGIRVNGVAPGVSLLPV  231 (288)
T ss_dssp             ECCTTTTSCCTTCHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEESSCSCCT
T ss_pred             EecccccCCCCCCchHHHHHHHHHHHHHHHHHHhhccCeEEEEEEeccccCcc
Confidence            999999999999999999999999999999999987 4999999999999999

>3asu_A Short-chain dehydrogenase/reductase SDR; SDR family, rossmann-fold, short-chain dehydrogenase/reducta ALLO-threonine dehydrogenase; 1.90A {Escherichia coli} PDB: 3asv_A*

Probab=100.00  E-value=9.8e-38  Score=261.05  Aligned_cols=184  Identities=26%  Similarity=0.428  Sum_probs=161.3

Q ss_pred             CEEEEcCCCChHHHHHHHHHHHcCCeEEEEeCCcchHHHHHHHHHhhCCCcEEEEEccCCCHHHHHHHHHHHHhHcCCcc
Q 044010           48 KVVIITGASSGIGEHLAYEYARRGACLALCARREKSLEEVADTAREIGSPDVITIRADVSKVDDCRSLVEETMNHFGRLD  127 (248)
Q Consensus        48 k~~lVtGg~~gIG~aia~~l~~~G~~V~l~~r~~~~~~~~~~~l~~~~~~~v~~~~~D~~~~~~~~~~~~~~~~~~g~id  127 (248)
                      |+++||||++|||++++++|+++|++|++++|+.+++++..+++.    .++.++.+|++|.++++++++++.+++|++|
T Consensus         1 k~vlVTGas~gIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~~~----~~~~~~~~Dv~~~~~v~~~~~~~~~~~g~iD   76 (248)
T 3asu_A            1 MIVLVTGATAGFGECITRRFIQQGHKVIATGRRQERLQELKDELG----DNLYIAQLDVRNRAAIEEMLASLPAEWCNID   76 (248)
T ss_dssp             CEEEETTTTSTTHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHC----TTEEEEECCTTCHHHHHHHHHTSCTTTCCCC
T ss_pred             CEEEEECCCChHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHhc----CceEEEEcCCCCHHHHHHHHHHHHHhCCCCC
Confidence            689999999999999999999999999999999877776666552    3688999999999999999999999999999


Q ss_pred             EEEEccccCC-cccccccCChHHHHHHHHhhhHHHHHHHHHHhhhhhhc-CCeEEEEcCccccccCCCCccchHHHHHHH
Q 044010          128 HLVNNAGISS-VALFEDIVNITDFKQIMNINFWGSVYTTRFAVPHLRYT-KGKIVVLSSAASWLTAPRMSFYNASKAALV  205 (248)
Q Consensus       128 ~vv~~ag~~~-~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~-~g~iV~isS~~~~~~~~~~~~Y~~sKaal~  205 (248)
                      ++|||||... ..+..+ .+.++|++.+++|+.+++.+++.+.|.|.++ .|+||++||..+..+.++...|++||++++
T Consensus        77 ~lvnnAg~~~~~~~~~~-~~~~~~~~~~~~N~~g~~~l~~~~~~~m~~~~~g~iv~isS~~~~~~~~~~~~Y~asKaa~~  155 (248)
T 3asu_A           77 ILVNNAGLALGMEPAHK-ASVEDWETMIDTNNKGLVYMTRAVLPGMVERNHGHIINIGSTAGSWPYAGGNVYGATKAFVR  155 (248)
T ss_dssp             EEEECCCCCCCCSCGGG-SCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCCEEEEECCGGGTSCCTTCHHHHHHHHHHH
T ss_pred             EEEECCCcCCCCCchhh-CCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcCCceEEEEccchhccCCCCCchHHHHHHHHH
Confidence            9999999863 344444 5789999999999999999999999999654 599999999999999899999999999999


Q ss_pred             HHHHHHHHHhCCC-eEEEEEecCccc-cCcccc
Q 044010          206 LFFETLRVELGSD-VGVTIVTPGFIE-SELTQG  236 (248)
Q Consensus       206 ~l~~~la~~~~~~-i~v~~v~pg~v~-T~~~~~  236 (248)
                      +++++++.|+++. ||||+|+||+++ |+|...
T Consensus       156 ~~~~~la~e~~~~gi~v~~v~PG~v~gT~~~~~  188 (248)
T 3asu_A          156 QFSLNLRTDLHGTAVRVTDIEPGLVGGTEFSNV  188 (248)
T ss_dssp             HHHHHHHHHTTTSCCEEEEEEECSBCC------
T ss_pred             HHHHHHHHHhhhcCcEEEEEeccccccCcchhh
Confidence            9999999999874 999999999999 998653

>1yde_A Retinal dehydrogenase/reductase 3; oxidoreductase, structural genomics, structural genomics CON SGC; 2.40A {Homo sapiens} SCOP: c.2.1.2

Probab=100.00  E-value=6.2e-38  Score=265.40  Aligned_cols=188  Identities=30%  Similarity=0.502  Sum_probs=168.7

Q ss_pred             cCCCCCEEEEcCCCChHHHHHHHHHHHcCCeEEEEeCCcchHHHHHHHHHhhCCCcEEEEEccCCCHHHHHHHHHHHHhH
Q 044010           43 EDVSGKVVIITGASSGIGEHLAYEYARRGACLALCARREKSLEEVADTAREIGSPDVITIRADVSKVDDCRSLVEETMNH  122 (248)
Q Consensus        43 ~~~~~k~~lVtGg~~gIG~aia~~l~~~G~~V~l~~r~~~~~~~~~~~l~~~~~~~v~~~~~D~~~~~~~~~~~~~~~~~  122 (248)
                      .++++|++|||||++|||++++++|+++|++|++++|+.++.++..+++.     ++.++.+|++|.++++++++++.++
T Consensus         5 ~~l~~k~vlVTGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~~-----~~~~~~~Dv~d~~~v~~~~~~~~~~   79 (270)
T 1yde_A            5 TRYAGKVVVVTGGGRGIGAGIVRAFVNSGARVVICDKDESGGRALEQELP-----GAVFILCDVTQEDDVKTLVSETIRR   79 (270)
T ss_dssp             CTTTTCEEEEETCSSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHCT-----TEEEEECCTTSHHHHHHHHHHHHHH
T ss_pred             CCCCCCEEEEECCCcHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHhc-----CCeEEEcCCCCHHHHHHHHHHHHHH
Confidence            46889999999999999999999999999999999999876665554432     4788999999999999999999999


Q ss_pred             cCCccEEEEccccCCc-ccccccCChHHHHHHHHhhhHHHHHHHHHHhhhhhhcCCeEEEEcCccccccCCCCccchHHH
Q 044010          123 FGRLDHLVNNAGISSV-ALFEDIVNITDFKQIMNINFWGSVYTTRFAVPHLRYTKGKIVVLSSAASWLTAPRMSFYNASK  201 (248)
Q Consensus       123 ~g~id~vv~~ag~~~~-~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~g~iV~isS~~~~~~~~~~~~Y~~sK  201 (248)
                      +|++|++|||||...+ .++.+ .+.++|++.+++|+.+++++++++.|.|.+++|+||++||..+..+.++..+|++||
T Consensus        80 ~g~iD~lv~nAg~~~~~~~~~~-~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~~g~iv~isS~~~~~~~~~~~~Y~asK  158 (270)
T 1yde_A           80 FGRLDCVVNNAGHHPPPQRPEE-TSAQGFRQLLELNLLGTYTLTKLALPYLRKSQGNVINISSLVGAIGQAQAVPYVATK  158 (270)
T ss_dssp             HSCCCEEEECCCCCCCCCCGGG-CCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEECCHHHHHCCTTCHHHHHHH
T ss_pred             cCCCCEEEECCCCCCCCCCccc-CCHHHHHHHHHHHhHHHHHHHHHHHHHHHHCCCEEEEEcCccccCCCCCCcccHHHH
Confidence            9999999999998754 33444 578999999999999999999999999976679999999999988888999999999


Q ss_pred             HHHHHHHHHHHHHhCC-CeEEEEEecCccccCcccc
Q 044010          202 AALVLFFETLRVELGS-DVGVTIVTPGFIESELTQG  236 (248)
Q Consensus       202 aal~~l~~~la~~~~~-~i~v~~v~pg~v~T~~~~~  236 (248)
                      +++++++++++.|+++ +||||+|+||+++|++.+.
T Consensus       159 aa~~~~~~~la~e~~~~gi~vn~v~Pg~v~t~~~~~  194 (270)
T 1yde_A          159 GAVTAMTKALALDESPYGVRVNCISPGNIWTPLWEE  194 (270)
T ss_dssp             HHHHHHHHHHHHHHGGGTCEEEEEEECSBCCHHHHH
T ss_pred             HHHHHHHHHHHHHhhhhCcEEEEEEeCccccchhhh
Confidence            9999999999999987 4999999999999998654

>3i4f_A 3-oxoacyl-[acyl-carrier protein] reductase; structural genomics, 3-oxoacyl-reductase, PSI-2; 2.39A {Bacillus thuringiensis serovar kurstakorganism_taxid} SCOP: c.2.1.0

Probab=100.00  E-value=1.8e-37  Score=261.19  Aligned_cols=195  Identities=23%  Similarity=0.363  Sum_probs=165.0

Q ss_pred             cCCCCCEEEEcCCCChHHHHHHHHHHHcCCeEEEEeCCcchHHHH-HHHHHhhCCCcEEEEEccCCCHHHHHHHHHHHHh
Q 044010           43 EDVSGKVVIITGASSGIGEHLAYEYARRGACLALCARREKSLEEV-ADTAREIGSPDVITIRADVSKVDDCRSLVEETMN  121 (248)
Q Consensus        43 ~~~~~k~~lVtGg~~gIG~aia~~l~~~G~~V~l~~r~~~~~~~~-~~~l~~~~~~~v~~~~~D~~~~~~~~~~~~~~~~  121 (248)
                      +++.+|++|||||++|||+++|++|+++|++|++++|+.+...+. .+.+++. +.++.++.+|++|.++++++++++.+
T Consensus         3 ~~~~~k~vlVTGas~gIG~~~a~~l~~~G~~v~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~Dl~~~~~v~~~~~~~~~   81 (264)
T 3i4f_A            3 LGRFVRHALITAGTKGLGKQVTEKLLAKGYSVTVTYHSDTTAMETMKETYKDV-EERLQFVQADVTKKEDLHKIVEEAMS   81 (264)
T ss_dssp             ---CCCEEEETTTTSHHHHHHHHHHHHTTCEEEEEESSCHHHHHHHHHHTGGG-GGGEEEEECCTTSHHHHHHHHHHHHH
T ss_pred             cccccCEEEEeCCCchhHHHHHHHHHHCCCEEEEEcCCChHHHHHHHHHHHhc-CCceEEEEecCCCHHHHHHHHHHHHH
Confidence            456789999999999999999999999999999998876544433 3333333 34799999999999999999999999


Q ss_pred             HcCCccEEEEccc--cCCcccccccCChHHHHHHHHhhhHHHHHHHHHHhhhhhhcC-CeEEEEcCc-cc-cccCCCCcc
Q 044010          122 HFGRLDHLVNNAG--ISSVALFEDIVNITDFKQIMNINFWGSVYTTRFAVPHLRYTK-GKIVVLSSA-AS-WLTAPRMSF  196 (248)
Q Consensus       122 ~~g~id~vv~~ag--~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~-g~iV~isS~-~~-~~~~~~~~~  196 (248)
                      ++|++|++|||||  .....+..+ .+.++|++.+++|+.+++.+++.+.|.|++++ |+||++||. .+ ..+.++...
T Consensus        82 ~~g~id~lv~~Ag~~~~~~~~~~~-~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~~~g~iv~iss~~~~~~~~~~~~~~  160 (264)
T 3i4f_A           82 HFGKIDFLINNAGPYVFERKKLVD-YEEDEWNEMIQGNLTAVFHLLKLVVPVMRKQNFGRIINYGFQGADSAPGWIYRSA  160 (264)
T ss_dssp             HHSCCCEEECCCCCCCCSCCCGGG-CCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEEECCTTGGGCCCCTTCHH
T ss_pred             HhCCCCEEEECCcccccCCCcccc-CCHHHHHHHHHhccHHHHHHHHHHHHHHHhcCCCeEEEEeechhcccCCCCCCch
Confidence            9999999999999  444444444 57899999999999999999999999987554 899999987 44 556677889


Q ss_pred             chHHHHHHHHHHHHHHHHhCC-CeEEEEEecCccccCccccccc
Q 044010          197 YNASKAALVLFFETLRVELGS-DVGVTIVTPGFIESELTQGKFL  239 (248)
Q Consensus       197 Y~~sKaal~~l~~~la~~~~~-~i~v~~v~pg~v~T~~~~~~~~  239 (248)
                      |++||+|+++++++++.|+++ +|+||+|+||+++|++......
T Consensus       161 Y~asKaa~~~~~~~la~e~~~~gi~v~~v~PG~v~t~~~~~~~~  204 (264)
T 3i4f_A          161 FAAAKVGLVSLTKTVAYEEAEYGITANMVCPGDIIGEMKEATIQ  204 (264)
T ss_dssp             HHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECCCCGGGGSCCHH
T ss_pred             hHHHHHHHHHHHHHHHHHhhhcCcEEEEEccCCccCccchhccH
Confidence            999999999999999999987 4999999999999999876543

>4iiu_A 3-oxoacyl-[acyl-carrier protein] reductase; structural genomics, center for structural genomics of infec diseases, csgid; HET: NAP; 2.10A {Escherichia coli} PDB: 4iiv_A*

Probab=100.00  E-value=2.3e-37  Score=261.24  Aligned_cols=198  Identities=24%  Similarity=0.386  Sum_probs=171.9

Q ss_pred             hhccccCCCCCEEEEcCCCChHHHHHHHHHHHcCCeEEE-EeCCcchHHHHHHHHHhhCCCcEEEEEccCCCHHHHHHHH
Q 044010           38 NSIFSEDVSGKVVIITGASSGIGEHLAYEYARRGACLAL-CARREKSLEEVADTAREIGSPDVITIRADVSKVDDCRSLV  116 (248)
Q Consensus        38 ~~~~~~~~~~k~~lVtGg~~gIG~aia~~l~~~G~~V~l-~~r~~~~~~~~~~~l~~~~~~~v~~~~~D~~~~~~~~~~~  116 (248)
                      +..+..++.+|++|||||++|||+++|++|+++|++|++ ..|+.++.++..+++++.+. ++.++.+|++|.+++++++
T Consensus        17 n~~~~~~l~~k~vlVTGas~gIG~~la~~l~~~G~~v~i~~~r~~~~~~~~~~~l~~~~~-~~~~~~~Dl~~~~~~~~~~   95 (267)
T 4iiu_A           17 NLYFQSNAMSRSVLVTGASKGIGRAIARQLAADGFNIGVHYHRDAAGAQETLNAIVANGG-NGRLLSFDVANREQCREVL   95 (267)
T ss_dssp             --------CCCEEEETTTTSHHHHHHHHHHHHTTCEEEEEESSCHHHHHHHHHHHHHTTC-CEEEEECCTTCHHHHHHHH
T ss_pred             hhhhccccCCCEEEEECCCChHHHHHHHHHHHCCCEEEEEeCCchHHHHHHHHHHHhcCC-ceEEEEecCCCHHHHHHHH
Confidence            444456789999999999999999999999999999866 45677777788888877654 7899999999999999999


Q ss_pred             HHHHhHcCCccEEEEccccCCcccccccCChHHHHHHHHhhhHHHHHHHHHHhhhhh--hcCCeEEEEcCccccccCCCC
Q 044010          117 EETMNHFGRLDHLVNNAGISSVALFEDIVNITDFKQIMNINFWGSVYTTRFAVPHLR--YTKGKIVVLSSAASWLTAPRM  194 (248)
Q Consensus       117 ~~~~~~~g~id~vv~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~--~~~g~iV~isS~~~~~~~~~~  194 (248)
                      +++.+++|++|++|||||.....++.+ .+.++|++.+++|+.+++.+++.+++.|.  +.+|+||++||..+..+.++.
T Consensus        96 ~~~~~~~g~id~li~nAg~~~~~~~~~-~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~~~~g~iv~isS~~~~~~~~~~  174 (267)
T 4iiu_A           96 EHEIAQHGAWYGVVSNAGIARDAAFPA-LSNDDWDAVIHTNLDSFYNVIQPCIMPMIGARQGGRIITLSSVSGVMGNRGQ  174 (267)
T ss_dssp             HHHHHHHCCCSEEEECCCCCCCCCGGG-CCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTSCEEEEEECCHHHHHCCTTC
T ss_pred             HHHHHHhCCccEEEECCCCCCCCcccc-CCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcCCCcEEEEEcchHhccCCCCC
Confidence            999999999999999999887666555 57899999999999999999999998874  345899999999999999999


Q ss_pred             ccchHHHHHHHHHHHHHHHHhCC-CeEEEEEecCccccCccccc
Q 044010          195 SFYNASKAALVLFFETLRVELGS-DVGVTIVTPGFIESELTQGK  237 (248)
Q Consensus       195 ~~Y~~sKaal~~l~~~la~~~~~-~i~v~~v~pg~v~T~~~~~~  237 (248)
                      ..|++||+|+++++++++.|+++ +|+||+|+||+++|++....
T Consensus       175 ~~Y~asKaa~~~~~~~la~e~~~~gi~v~~v~PG~v~t~~~~~~  218 (267)
T 4iiu_A          175 VNYSAAKAGIIGATKALAIELAKRKITVNCIAPGLIDTGMIEME  218 (267)
T ss_dssp             HHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECSBCSTTCCCC
T ss_pred             chhHHHHHHHHHHHHHHHHHHhhcCeEEEEEEEeeecCCccccc
Confidence            99999999999999999999987 49999999999999998643

>3un1_A Probable oxidoreductase; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; 2.45A {Sinorhizobium meliloti}

Probab=100.00  E-value=1.6e-37  Score=261.61  Aligned_cols=184  Identities=29%  Similarity=0.428  Sum_probs=164.2

Q ss_pred             cCCCCCEEEEcCCCChHHHHHHHHHHHcCCeEEEEeCCcchHHHHHHHHHhhCCCcEEEEEccCCCHHHHHHHHHHHHhH
Q 044010           43 EDVSGKVVIITGASSGIGEHLAYEYARRGACLALCARREKSLEEVADTAREIGSPDVITIRADVSKVDDCRSLVEETMNH  122 (248)
Q Consensus        43 ~~~~~k~~lVtGg~~gIG~aia~~l~~~G~~V~l~~r~~~~~~~~~~~l~~~~~~~v~~~~~D~~~~~~~~~~~~~~~~~  122 (248)
                      +++++|++|||||++|||+++|++|+++|++|++++|+.++.++          .++.++.+|++|+++++++++++.++
T Consensus        24 ~~~~~k~vlVTGas~gIG~aia~~l~~~G~~V~~~~r~~~~~~~----------~~~~~~~~Dv~d~~~v~~~~~~~~~~   93 (260)
T 3un1_A           24 MRNQQKVVVITGASQGIGAGLVRAYRDRNYRVVATSRSIKPSAD----------PDIHTVAGDISKPETADRIVREGIER   93 (260)
T ss_dssp             HHTTCCEEEESSCSSHHHHHHHHHHHHTTCEEEEEESSCCCCSS----------TTEEEEESCTTSHHHHHHHHHHHHHH
T ss_pred             hCcCCCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEeCChhhccc----------CceEEEEccCCCHHHHHHHHHHHHHH
Confidence            46899999999999999999999999999999999998764321          26889999999999999999999999


Q ss_pred             cCCccEEEEccccCCcccccccCChHHHHHHHHhhhHHHHHHHHHHhhhhhhcC-CeEEEEcCcccccc--CCCCccchH
Q 044010          123 FGRLDHLVNNAGISSVALFEDIVNITDFKQIMNINFWGSVYTTRFAVPHLRYTK-GKIVVLSSAASWLT--APRMSFYNA  199 (248)
Q Consensus       123 ~g~id~vv~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~-g~iV~isS~~~~~~--~~~~~~Y~~  199 (248)
                      +|++|++|||||.....++.+ .+.++|++.+++|+.+++++++++.|.|.+++ |+||++||..+..+  .++...|++
T Consensus        94 ~g~iD~lv~nAg~~~~~~~~~-~~~~~~~~~~~vN~~g~~~l~~~~~~~m~~~~~g~iv~isS~~~~~~~~~~~~~~Y~~  172 (260)
T 3un1_A           94 FGRIDSLVNNAGVFLAKPFVE-MTQEDYDHNLGVNVAGFFHITQRAAAEMLKQGSGHIVSITTSLVDQPMVGMPSALASL  172 (260)
T ss_dssp             HSCCCEEEECCCCCCCCCGGG-CCHHHHHHHHHHHTHHHHHHHHHHHHHHHHTTCEEEEEECCTTTTSCBTTCCCHHHHH
T ss_pred             CCCCCEEEECCCCCCCCChhh-CCHHHHHHHHHHhhHHHHHHHHHHHHHHHHcCCcEEEEEechhhccCCCCCccHHHHH
Confidence            999999999999887666655 57899999999999999999999999987554 89999999887644  345578999


Q ss_pred             HHHHHHHHHHHHHHHhCCC-eEEEEEecCccccCccccc
Q 044010          200 SKAALVLFFETLRVELGSD-VGVTIVTPGFIESELTQGK  237 (248)
Q Consensus       200 sKaal~~l~~~la~~~~~~-i~v~~v~pg~v~T~~~~~~  237 (248)
                      ||+|+++++++++.|+++. ||||+|+||+++|+|....
T Consensus       173 sKaa~~~l~~~la~e~~~~gI~vn~v~PG~v~t~~~~~~  211 (260)
T 3un1_A          173 TKGGLNAVTRSLAMEFSRSGVRVNAVSPGVIKTPMHPAE  211 (260)
T ss_dssp             HHHHHHHHHHHHHHHTTTTTEEEEEEEECCBCCTTSCGG
T ss_pred             HHHHHHHHHHHHHHHhCcCCeEEEEEeecCCCCCCCCHH
Confidence            9999999999999999885 9999999999999997654

>1g0o_A Trihydroxynaphthalene reductase; protein-NADPH-active site inhibitor complex, dinucleotide binding fold, oxidoreductase; HET: NDP PYQ; 1.70A {Magnaporthe grisea} SCOP: c.2.1.2 PDB: 1doh_A* 1g0n_A* 1ybv_A*

Probab=100.00  E-value=3.2e-37  Score=262.49  Aligned_cols=192  Identities=29%  Similarity=0.520  Sum_probs=170.3

Q ss_pred             cCCCCCEEEEcCCCChHHHHHHHHHHHcCCeEEEEeCCcch-HHHHHHHHHhhCCCcEEEEEccCCCHHHHHHHHHHHHh
Q 044010           43 EDVSGKVVIITGASSGIGEHLAYEYARRGACLALCARREKS-LEEVADTAREIGSPDVITIRADVSKVDDCRSLVEETMN  121 (248)
Q Consensus        43 ~~~~~k~~lVtGg~~gIG~aia~~l~~~G~~V~l~~r~~~~-~~~~~~~l~~~~~~~v~~~~~D~~~~~~~~~~~~~~~~  121 (248)
                      +++++|++|||||++|||++++++|+++|++|++++|+.++ .+...+++++.+. ++.++.+|++|.++++++++++.+
T Consensus        25 ~~~~~k~vlVTGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~-~~~~~~~D~~~~~~~~~~~~~~~~  103 (283)
T 1g0o_A           25 ASLEGKVALVTGAGRGIGREMAMELGRRGCKVIVNYANSTESAEEVVAAIKKNGS-DAACVKANVGVVEDIVRMFEEAVK  103 (283)
T ss_dssp             GCCTTCEEEETTTTSHHHHHHHHHHHHTTCEEEEEESSCHHHHHHHHHHHHHTTC-CEEEEECCTTCHHHHHHHHHHHHH
T ss_pred             cCCCCCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEeCCchHHHHHHHHHHHHhCC-CeEEEEcCCCCHHHHHHHHHHHHH
Confidence            46789999999999999999999999999999999998754 4555566665543 788999999999999999999999


Q ss_pred             HcCCccEEEEccccCCcccccccCChHHHHHHHHhhhHHHHHHHHHHhhhhhhcCCeEEEEcCccccccCCC-CccchHH
Q 044010          122 HFGRLDHLVNNAGISSVALFEDIVNITDFKQIMNINFWGSVYTTRFAVPHLRYTKGKIVVLSSAASWLTAPR-MSFYNAS  200 (248)
Q Consensus       122 ~~g~id~vv~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~g~iV~isS~~~~~~~~~-~~~Y~~s  200 (248)
                      ++|++|++|||||.....++.+ .+.++|++.+++|+.+++++++++.|.| +..|+||++||..+..+.+. ...|++|
T Consensus       104 ~~g~iD~lv~~Ag~~~~~~~~~-~~~~~~~~~~~~N~~g~~~l~~~~~~~~-~~~g~iv~isS~~~~~~~~~~~~~Y~as  181 (283)
T 1g0o_A          104 IFGKLDIVCSNSGVVSFGHVKD-VTPEEFDRVFTINTRGQFFVAREAYKHL-EIGGRLILMGSITGQAKAVPKHAVYSGS  181 (283)
T ss_dssp             HHSCCCEEEECCCCCCCCCGGG-CCHHHHHHHHHHHTHHHHHHHHHHHHHS-CTTCEEEEECCGGGTCSSCSSCHHHHHH
T ss_pred             HcCCCCEEEECCCcCCCCCccc-CCHHHHHHHHHHhhHHHHHHHHHHHHHH-hcCCeEEEEechhhccCCCCCCcchHHH
Confidence            9999999999999876655555 5789999999999999999999999999 35689999999998877664 8899999


Q ss_pred             HHHHHHHHHHHHHHhCC-CeEEEEEecCccccCccccc
Q 044010          201 KAALVLFFETLRVELGS-DVGVTIVTPGFIESELTQGK  237 (248)
Q Consensus       201 Kaal~~l~~~la~~~~~-~i~v~~v~pg~v~T~~~~~~  237 (248)
                      |+++++++++++.|+++ +||||+|+||+++|+|....
T Consensus       182 K~a~~~~~~~la~e~~~~gi~v~~v~PG~v~t~~~~~~  219 (283)
T 1g0o_A          182 KGAIETFARCMAIDMADKKITVNVVAPGGIKTDMYHAV  219 (283)
T ss_dssp             HHHHHHHHHHHHHHHGGGTCEEEEEEECCBSSHHHHHH
T ss_pred             HHHHHHHHHHHHHHhcccCeEEEEEecCcccchhhhhh
Confidence            99999999999999987 59999999999999986543

>3m1a_A Putative dehydrogenase; short, PSI, MCSG, structural genomics, midwest center for structural genomics, protein structure initiative; 2.00A {Streptomyces avermitilis}

Probab=100.00  E-value=2.5e-37  Score=262.60  Aligned_cols=188  Identities=30%  Similarity=0.456  Sum_probs=169.7

Q ss_pred             CCCCCEEEEcCCCChHHHHHHHHHHHcCCeEEEEeCCcchHHHHHHHHHhhCCCcEEEEEccCCCHHHHHHHHHHHHhHc
Q 044010           44 DVSGKVVIITGASSGIGEHLAYEYARRGACLALCARREKSLEEVADTAREIGSPDVITIRADVSKVDDCRSLVEETMNHF  123 (248)
Q Consensus        44 ~~~~k~~lVtGg~~gIG~aia~~l~~~G~~V~l~~r~~~~~~~~~~~l~~~~~~~v~~~~~D~~~~~~~~~~~~~~~~~~  123 (248)
                      ++++|++|||||++|||+++|++|+++|++|++++|+.++.++..+++    +.++.++.+|++|.++++++++++.+++
T Consensus         2 ~~~~k~vlVTGas~gIG~~~a~~l~~~G~~V~~~~r~~~~~~~~~~~~----~~~~~~~~~Dv~~~~~~~~~~~~~~~~~   77 (281)
T 3m1a_A            2 SESAKVWLVTGASSGFGRAIAEAAVAAGDTVIGTARRTEALDDLVAAY----PDRAEAISLDVTDGERIDVVAADVLARY   77 (281)
T ss_dssp             --CCCEEEETTTTSHHHHHHHHHHHHTTCEEEEEESSGGGGHHHHHHC----TTTEEEEECCTTCHHHHHHHHHHHHHHH
T ss_pred             CCCCcEEEEECCCChHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHhc----cCCceEEEeeCCCHHHHHHHHHHHHHhC
Confidence            467899999999999999999999999999999999988777655433    3478999999999999999999999999


Q ss_pred             CCccEEEEccccCCcccccccCChHHHHHHHHhhhHHHHHHHHHHhhhhhhc-CCeEEEEcCccccccCCCCccchHHHH
Q 044010          124 GRLDHLVNNAGISSVALFEDIVNITDFKQIMNINFWGSVYTTRFAVPHLRYT-KGKIVVLSSAASWLTAPRMSFYNASKA  202 (248)
Q Consensus       124 g~id~vv~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~-~g~iV~isS~~~~~~~~~~~~Y~~sKa  202 (248)
                      |++|++|||||.....++.+ .+.++|++.+++|+.+++.+++.++|.|++. .|+||++||..+..+.++..+|++||+
T Consensus        78 g~id~lv~~Ag~~~~~~~~~-~~~~~~~~~~~~N~~g~~~~~~~~~~~~~~~~~~~iv~~sS~~~~~~~~~~~~Y~~sK~  156 (281)
T 3m1a_A           78 GRVDVLVNNAGRTQVGAFEE-TTERELRDLFELHVFGPARLTRALLPQMRERGSGSVVNISSFGGQLSFAGFSAYSATKA  156 (281)
T ss_dssp             SCCSEEEECCCCEEECCTTT-CCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEEECCGGGTCCCTTCHHHHHHHH
T ss_pred             CCCCEEEECCCcCCCCChhh-CCHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCEEEEEcCccccCCCCCchHHHHHHH
Confidence            99999999999876665555 5789999999999999999999999999754 489999999999999999999999999


Q ss_pred             HHHHHHHHHHHHhCC-CeEEEEEecCccccCcccc
Q 044010          203 ALVLFFETLRVELGS-DVGVTIVTPGFIESELTQG  236 (248)
Q Consensus       203 al~~l~~~la~~~~~-~i~v~~v~pg~v~T~~~~~  236 (248)
                      ++++++++++.|+++ +|+||+|+||+++|++...
T Consensus       157 a~~~~~~~la~e~~~~gi~v~~v~Pg~v~t~~~~~  191 (281)
T 3m1a_A          157 ALEQLSEGLADEVAPFGIKVLIVEPGAFRTNLFGK  191 (281)
T ss_dssp             HHHHHHHHHHHHHGGGTEEEEEEEECCBCCTTTCC
T ss_pred             HHHHHHHHHHHHhhccCcEEEEEecCccccccccc
Confidence            999999999999987 5999999999999999764

>3u9l_A 3-oxoacyl-[acyl-carrier-protein] reductase; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; 2.10A {Sinorhizobium meliloti}

Probab=100.00  E-value=3.1e-37  Score=267.61  Aligned_cols=191  Identities=29%  Similarity=0.385  Sum_probs=160.4

Q ss_pred             cCCCCCEEEEcCCCChHHHHHHHHHHHcCCeEEEEeCC-----cchHHHHHHHHHhhCCCcEEEEEccCCCHHHHHHHHH
Q 044010           43 EDVSGKVVIITGASSGIGEHLAYEYARRGACLALCARR-----EKSLEEVADTAREIGSPDVITIRADVSKVDDCRSLVE  117 (248)
Q Consensus        43 ~~~~~k~~lVtGg~~gIG~aia~~l~~~G~~V~l~~r~-----~~~~~~~~~~l~~~~~~~v~~~~~D~~~~~~~~~~~~  117 (248)
                      |+|++|++|||||++|||+++|++|+++|++|++++|+     .++.++..+.++..+ .++.++.+|++|.++++++++
T Consensus         1 M~m~~k~vlVTGas~GIG~aia~~L~~~G~~V~~~~r~~~~r~~~~~~~l~~~~~~~~-~~~~~~~~Dvtd~~~v~~~~~   79 (324)
T 3u9l_A            1 MVMSKKIILITGASSGFGRLTAEALAGAGHRVYASMRDIVGRNASNVEAIAGFARDND-VDLRTLELDVQSQVSVDRAID   79 (324)
T ss_dssp             ----CCEEEESSCSSHHHHHHHHHHHHTTCEEEEEESCTTTTTHHHHHHHHHHHHHHT-CCEEEEECCTTCHHHHHHHHH
T ss_pred             CCCCCCEEEEECCCcHHHHHHHHHHHHCCCEEEEecCcccccCHHHHHHHHHHHHhcC-CcEEEEEeecCCHHHHHHHHH
Confidence            46789999999999999999999999999999988876     334455555555444 378999999999999999999


Q ss_pred             HHHhHcCCccEEEEccccCCcccccccCChHHHHHHHHhhhHHHHHHHHHHhhhhhhc-CCeEEEEcCccccc-cCCCCc
Q 044010          118 ETMNHFGRLDHLVNNAGISSVALFEDIVNITDFKQIMNINFWGSVYTTRFAVPHLRYT-KGKIVVLSSAASWL-TAPRMS  195 (248)
Q Consensus       118 ~~~~~~g~id~vv~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~-~g~iV~isS~~~~~-~~~~~~  195 (248)
                      ++.+++|++|++|||||.....+..+ .+.++|++.+++|+.|++.++++++|.|+++ .|+||++||..+.. +.++..
T Consensus        80 ~~~~~~g~iD~lVnnAG~~~~~~~~~-~~~~~~~~~~~vN~~g~~~l~~a~lp~m~~~~~g~iV~isS~~~~~~~~~~~~  158 (324)
T 3u9l_A           80 QIIGEDGRIDVLIHNAGHMVFGPAEA-FTPEQFAELYDINVLSTQRVNRAALPHMRRQKHGLLIWISSSSSAGGTPPYLA  158 (324)
T ss_dssp             HHHHHHSCCSEEEECCCCCBCSCGGG-SCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEEECCGGGTSCCCSSCH
T ss_pred             HHHHHcCCCCEEEECCCcCCCCChhh-CCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcCCCEEEEEecchhccCCCCcch
Confidence            99999999999999999887666665 5789999999999999999999999999754 48999999999884 456678


Q ss_pred             cchHHHHHHHHHHHHHHHHhCC-CeEEEEEecCccccCccc
Q 044010          196 FYNASKAALVLFFETLRVELGS-DVGVTIVTPGFIESELTQ  235 (248)
Q Consensus       196 ~Y~~sKaal~~l~~~la~~~~~-~i~v~~v~pg~v~T~~~~  235 (248)
                      .|++||+|+++++++++.|+++ +|+|++|+||+++|++..
T Consensus       159 ~Y~asKaa~~~~~~~la~el~~~gI~v~~v~PG~v~t~~~~  199 (324)
T 3u9l_A          159 PYFAAKAAMDAIAVQYARELSRWGIETSIIVPGAFTSGTNH  199 (324)
T ss_dssp             HHHHHHHHHHHHHHHHHHHHHTTTEEEEEEEECCC------
T ss_pred             hHHHHHHHHHHHHHHHHHHhhhhCcEEEEEECCccccCchh
Confidence            9999999999999999999987 599999999999987753

>3tl3_A Short-chain type dehydrogenase/reductase; ssgcid, seattle structural genomics center for infectious DI oxidoreductase; 1.85A {Mycobacterium ulcerans}

Probab=100.00  E-value=3.5e-38  Score=264.78  Aligned_cols=188  Identities=23%  Similarity=0.338  Sum_probs=156.5

Q ss_pred             ccCCCCCEEEEcCCCChHHHHHHHHHHHcCCeEEEEeCCcchHHHHHHHHHhhCCCcEEEEEccCCCHHHHHHHHHHHHh
Q 044010           42 SEDVSGKVVIITGASSGIGEHLAYEYARRGACLALCARREKSLEEVADTAREIGSPDVITIRADVSKVDDCRSLVEETMN  121 (248)
Q Consensus        42 ~~~~~~k~~lVtGg~~gIG~aia~~l~~~G~~V~l~~r~~~~~~~~~~~l~~~~~~~v~~~~~D~~~~~~~~~~~~~~~~  121 (248)
                      .+++++|++|||||++|||+++|++|+++|++|++++|+.++   ..+++    +.++.++.+|++|.++++++++.+.+
T Consensus         4 ~m~l~~k~vlVTGas~gIG~aia~~l~~~G~~V~~~~r~~~~---~~~~~----~~~~~~~~~D~~~~~~v~~~~~~~~~   76 (257)
T 3tl3_A            4 SMEIRDAVAVVTGGASGLGLATTKRLLDAGAQVVVLDIRGED---VVADL----GDRARFAAADVTDEAAVASALDLAET   76 (257)
T ss_dssp             ------CEEEEETTTSHHHHHHHHHHHHHTCEEEEEESSCHH---HHHHT----CTTEEEEECCTTCHHHHHHHHHHHHH
T ss_pred             cceecCCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEeCchHH---HHHhc----CCceEEEECCCCCHHHHHHHHHHHHH
Confidence            367899999999999999999999999999999999996532   22222    34789999999999999999999877


Q ss_pred             HcCCccEEEEccccCCcccccc---cCChHHHHHHHHhhhHHHHHHHHHHhhhhhh---------cCCeEEEEcCccccc
Q 044010          122 HFGRLDHLVNNAGISSVALFED---IVNITDFKQIMNINFWGSVYTTRFAVPHLRY---------TKGKIVVLSSAASWL  189 (248)
Q Consensus       122 ~~g~id~vv~~ag~~~~~~~~~---~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~---------~~g~iV~isS~~~~~  189 (248)
                       +|++|++|||||........+   +.+.++|++.+++|+.+++.+++++.|.|.+         .+|+||++||..+..
T Consensus        77 -~g~id~lv~nAg~~~~~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~~~~~~~~~~~~~~~g~iv~isS~~~~~  155 (257)
T 3tl3_A           77 -MGTLRIVVNCAGTGNAIRVLSRDGVFSLAAFRKIVDINLVGSFNVLRLAAERIAKTEPVGPNAEERGVIINTASVAAFD  155 (257)
T ss_dssp             -HSCEEEEEECGGGSHHHHHHHHTCCCSHHHHHHHHHHHHHHHHHHHHHHHHHHTTSCCC--CCCCSEEEEEECCCC--C
T ss_pred             -hCCCCEEEECCCCCCCcccccccccCCHHHHHHHHHHccHHHHHHHHHHHHHHHHhcccccccCCCcEEEEEcchhhcC
Confidence             999999999999875443221   2577999999999999999999999999875         248999999999999


Q ss_pred             cCCCCccchHHHHHHHHHHHHHHHHhCCC-eEEEEEecCccccCccccc
Q 044010          190 TAPRMSFYNASKAALVLFFETLRVELGSD-VGVTIVTPGFIESELTQGK  237 (248)
Q Consensus       190 ~~~~~~~Y~~sKaal~~l~~~la~~~~~~-i~v~~v~pg~v~T~~~~~~  237 (248)
                      +.++...|++||+|+++|+++++.|+++. ||||+|+||+|+|+|.+..
T Consensus       156 ~~~~~~~Y~asKaa~~~~~~~la~e~~~~gI~vn~v~PG~v~T~~~~~~  204 (257)
T 3tl3_A          156 GQIGQAAYSASKGGVVGMTLPIARDLASHRIRVMTIAPGLFDTPLLASL  204 (257)
T ss_dssp             CHHHHHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECSBCCTTC---
T ss_pred             CCCCCccHHHHHHHHHHHHHHHHHHhcccCcEEEEEEecCccChhhhhc
Confidence            88888999999999999999999999874 9999999999999998764

>2qq5_A DHRS1, dehydrogenase/reductase SDR family member 1; short-chain, structura genomics consortium, SGC, oxidoreductase; 1.80A {Homo sapiens}

Probab=100.00  E-value=3.8e-37  Score=258.93  Aligned_cols=191  Identities=29%  Similarity=0.410  Sum_probs=166.5

Q ss_pred             CCCCCEEEEcCCCChHHHHHHHHHHHcCCeEEEEeCCcchHHHHHHHHHhhCCCcEEEEEccCCCHHHHHHHHHHHHhH-
Q 044010           44 DVSGKVVIITGASSGIGEHLAYEYARRGACLALCARREKSLEEVADTAREIGSPDVITIRADVSKVDDCRSLVEETMNH-  122 (248)
Q Consensus        44 ~~~~k~~lVtGg~~gIG~aia~~l~~~G~~V~l~~r~~~~~~~~~~~l~~~~~~~v~~~~~D~~~~~~~~~~~~~~~~~-  122 (248)
                      ++++|++|||||++|||++++++|+++|++|++++|+.++.++..+++++.+. ++.++.+|++|.++++++++++.++ 
T Consensus         2 ~l~~k~vlVTGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~-~~~~~~~Dv~~~~~v~~~~~~~~~~~   80 (260)
T 2qq5_A            2 PMNGQVCVVTGASRGIGRGIALQLCKAGATVYITGRHLDTLRVVAQEAQSLGG-QCVPVVCDSSQESEVRSLFEQVDREQ   80 (260)
T ss_dssp             TTTTCEEEESSTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHHSS-EEEEEECCTTSHHHHHHHHHHHHHHH
T ss_pred             CCCCCEEEEeCCCchHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHHcCC-ceEEEECCCCCHHHHHHHHHHHHHhc
Confidence            57899999999999999999999999999999999999888888888876654 7889999999999999999999887 


Q ss_pred             cCCccEEEEccc--cC-----CcccccccCChHHHHHHHHhhhHHHHHHHHHHhhhhhhc-CCeEEEEcCccccccCCCC
Q 044010          123 FGRLDHLVNNAG--IS-----SVALFEDIVNITDFKQIMNINFWGSVYTTRFAVPHLRYT-KGKIVVLSSAASWLTAPRM  194 (248)
Q Consensus       123 ~g~id~vv~~ag--~~-----~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~-~g~iV~isS~~~~~~~~~~  194 (248)
                      +|++|++|||||  ..     ...++.+ .+.++|++.+++|+.+++++++.+.|.|.+. .|+||++||..+..+. +.
T Consensus        81 ~g~id~lvnnAg~g~~~~~~~~~~~~~~-~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~g~iv~isS~~~~~~~-~~  158 (260)
T 2qq5_A           81 QGRLDVLVNNAYAGVQTILNTRNKAFWE-TPASMWDDINNVGLRGHYFCSVYGARLMVPAGQGLIVVISSPGSLQYM-FN  158 (260)
T ss_dssp             TTCCCEEEECCCTTHHHHHHTTTCCTTT-SCTTHHHHHHTTTTHHHHHHHHHHHHHHGGGTCCEEEEECCGGGTSCC-SS
T ss_pred             CCCceEEEECCccccccccccCCCcccc-CCHHHHHHHHhhcchhHHHHHHHHHHHHhhcCCcEEEEEcChhhcCCC-CC
Confidence            899999999995  32     1233334 4678999999999999999999999998754 4899999999887654 46


Q ss_pred             ccchHHHHHHHHHHHHHHHHhCC-CeEEEEEecCccccCccccc
Q 044010          195 SFYNASKAALVLFFETLRVELGS-DVGVTIVTPGFIESELTQGK  237 (248)
Q Consensus       195 ~~Y~~sKaal~~l~~~la~~~~~-~i~v~~v~pg~v~T~~~~~~  237 (248)
                      .+|++||+++++++++++.|+++ +|+||+|+||+++|+|....
T Consensus       159 ~~Y~asK~a~~~~~~~la~e~~~~gi~v~~v~PG~v~T~~~~~~  202 (260)
T 2qq5_A          159 VPYGVGKAACDKLAADCAHELRRHGVSCVSLWPGIVQTELLKEH  202 (260)
T ss_dssp             HHHHHHHHHHHHHHHHHHHHHGGGTCEEEEEECCCSCTTTC---
T ss_pred             CchHHHHHHHHHHHHHHHHHhccCCeEEEEEecCccccHHHHHh
Confidence            78999999999999999999987 59999999999999997654

>3ek2_A Enoyl-(acyl-carrier-protein) reductase (NADH); ssgcid, oxidoreductase, structural genomics; 1.90A {Burkholderia pseudomallei 1710B} SCOP: c.2.1.2

Probab=100.00  E-value=2.6e-37  Score=260.68  Aligned_cols=195  Identities=22%  Similarity=0.255  Sum_probs=167.1

Q ss_pred             cccCCCCCEEEEcCCC--ChHHHHHHHHHHHcCCeEEEEeCCcchHHHHHHHHHhhCCCcEEEEEccCCCHHHHHHHHHH
Q 044010           41 FSEDVSGKVVIITGAS--SGIGEHLAYEYARRGACLALCARREKSLEEVADTAREIGSPDVITIRADVSKVDDCRSLVEE  118 (248)
Q Consensus        41 ~~~~~~~k~~lVtGg~--~gIG~aia~~l~~~G~~V~l~~r~~~~~~~~~~~l~~~~~~~v~~~~~D~~~~~~~~~~~~~  118 (248)
                      ...++++|++|||||+  +|||+++|++|+++|++|++++|+... ++..+++.+..+ ++.++.+|++|.+++++++++
T Consensus         8 ~~~~~~~k~vlITGa~~~~giG~~ia~~l~~~G~~V~~~~r~~~~-~~~~~~~~~~~~-~~~~~~~Dv~~~~~v~~~~~~   85 (271)
T 3ek2_A            8 HMGFLDGKRILLTGLLSNRSIAYGIAKACKREGAELAFTYVGDRF-KDRITEFAAEFG-SELVFPCDVADDAQIDALFAS   85 (271)
T ss_dssp             -CCTTTTCEEEECCCCSTTSHHHHHHHHHHHTTCEEEEEESSGGG-HHHHHHHHHHTT-CCCEEECCTTCHHHHHHHHHH
T ss_pred             CccccCCCEEEEeCCCCCCcHHHHHHHHHHHcCCCEEEEecchhh-HHHHHHHHHHcC-CcEEEECCCCCHHHHHHHHHH
Confidence            3458899999999998  999999999999999999999998544 444455544444 578899999999999999999


Q ss_pred             HHhHcCCccEEEEccccCCc----ccccccCChHHHHHHHHhhhHHHHHHHHHHhhhhhhcCCeEEEEcCccccccCCCC
Q 044010          119 TMNHFGRLDHLVNNAGISSV----ALFEDIVNITDFKQIMNINFWGSVYTTRFAVPHLRYTKGKIVVLSSAASWLTAPRM  194 (248)
Q Consensus       119 ~~~~~g~id~vv~~ag~~~~----~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~g~iV~isS~~~~~~~~~~  194 (248)
                      +.+++|++|++|||||....    .+..+..+.++|++.+++|+.+++.+++.+.|.|+ ++|+||++||.++..+.++.
T Consensus        86 ~~~~~g~id~lv~nAg~~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~-~~g~iv~isS~~~~~~~~~~  164 (271)
T 3ek2_A           86 LKTHWDSLDGLVHSIGFAPREAIAGDFLDGLTRENFRIAHDISAYSFPALAKAALPMLS-DDASLLTLSYLGAERAIPNY  164 (271)
T ss_dssp             HHHHCSCEEEEEECCCCCCGGGGSSCTTTTCCHHHHHHHHHHHTTHHHHHHHHHGGGEE-EEEEEEEEECGGGTSBCTTT
T ss_pred             HHHHcCCCCEEEECCccCccccccCccccccCHHHHHHHHhhhHHHHHHHHHHHHHHhc-cCceEEEEeccccccCCCCc
Confidence            99999999999999998765    34444357899999999999999999999999987 46899999999999999999


Q ss_pred             ccchHHHHHHHHHHHHHHHHhCC-CeEEEEEecCccccCcccccc
Q 044010          195 SFYNASKAALVLFFETLRVELGS-DVGVTIVTPGFIESELTQGKF  238 (248)
Q Consensus       195 ~~Y~~sKaal~~l~~~la~~~~~-~i~v~~v~pg~v~T~~~~~~~  238 (248)
                      .+|++||+|+++|+++++.|+++ +||||+|+||+|+|+|.+...
T Consensus       165 ~~Y~asKaa~~~~~~~la~e~~~~gi~v~~v~PG~v~T~~~~~~~  209 (271)
T 3ek2_A          165 NTMGLAKAALEASVRYLAVSLGAKGVRVNAISAGPIKTLAASGIK  209 (271)
T ss_dssp             THHHHHHHHHHHHHHHHHHHHHTTTCEEEEEEECCC-----CCCH
T ss_pred             cchhHHHHHHHHHHHHHHHHHHhcCcEEEEEecCcccchhhhccc
Confidence            99999999999999999999977 499999999999999987653

>2a4k_A 3-oxoacyl-[acyl carrier protein] reductase; reductase,hyperthermophIle, structural genomics, PSI, protei structure initiative; 2.30A {Thermus thermophilus} SCOP: c.2.1.2

Probab=100.00  E-value=6.4e-38  Score=264.39  Aligned_cols=186  Identities=32%  Similarity=0.495  Sum_probs=165.8

Q ss_pred             CCCCCEEEEcCCCChHHHHHHHHHHHcCCeEEEEeCCcchHHHHHHHHHhhCCCcEEEEEccCCCHHHHHHHHHHHHhHc
Q 044010           44 DVSGKVVIITGASSGIGEHLAYEYARRGACLALCARREKSLEEVADTAREIGSPDVITIRADVSKVDDCRSLVEETMNHF  123 (248)
Q Consensus        44 ~~~~k~~lVtGg~~gIG~aia~~l~~~G~~V~l~~r~~~~~~~~~~~l~~~~~~~v~~~~~D~~~~~~~~~~~~~~~~~~  123 (248)
                      ++++|+++||||++|||++++++|+++|++|++++|+.++.++..+++.    .++.++.+|++|.++++++++++.+++
T Consensus         3 ~l~~k~vlITGas~gIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~~~----~~~~~~~~D~~~~~~v~~~~~~~~~~~   78 (263)
T 2a4k_A            3 RLSGKTILVTGAASGIGRAALDLFAREGASLVAVDREERLLAEAVAALE----AEAIAVVADVSDPKAVEAVFAEALEEF   78 (263)
T ss_dssp             TTTTCEEEEESTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHTCC----SSEEEEECCTTSHHHHHHHHHHHHHHH
T ss_pred             CCCCCEEEEECCCCHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHhc----CceEEEEcCCCCHHHHHHHHHHHHHHc
Confidence            6889999999999999999999999999999999999876666554432    378899999999999999999999999


Q ss_pred             CCccEEEEccccCCcccccccCChHHHHHHHHhhhHHHHHHHHHHhhhhhhcCCeEEEEcCccccccCCCCccchHHHHH
Q 044010          124 GRLDHLVNNAGISSVALFEDIVNITDFKQIMNINFWGSVYTTRFAVPHLRYTKGKIVVLSSAASWLTAPRMSFYNASKAA  203 (248)
Q Consensus       124 g~id~vv~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~g~iV~isS~~~~~~~~~~~~Y~~sKaa  203 (248)
                      |++|++|||||.....+..+ .+.++|++.+++|+.+++++++.+.|.| +++|+||++||..+. +.++...|++||++
T Consensus        79 g~iD~lvnnAg~~~~~~~~~-~~~~~~~~~~~~N~~g~~~l~~~~~~~~-~~~g~iv~isS~~~~-~~~~~~~Y~asK~a  155 (263)
T 2a4k_A           79 GRLHGVAHFAGVAHSALSWN-LPLEAWEKVLRVNLTGSFLVARKAGEVL-EEGGSLVLTGSVAGL-GAFGLAHYAAGKLG  155 (263)
T ss_dssp             SCCCEEEEGGGGTTTTC-----CHHHHHHHHHHHHHHHHHHHHHHHHHC-CTTCEEEEECCCTTC-CHHHHHHHHHCSSH
T ss_pred             CCCcEEEECCCCCCCCChhh-CCHHHHHHHHHHHhHHHHHHHHHHHHHH-hcCCEEEEEecchhc-CCCCcHHHHHHHHH
Confidence            99999999999876655555 5789999999999999999999999999 457999999999988 77778899999999


Q ss_pred             HHHHHHHHHHHhCCC-eEEEEEecCccccCcccc
Q 044010          204 LVLFFETLRVELGSD-VGVTIVTPGFIESELTQG  236 (248)
Q Consensus       204 l~~l~~~la~~~~~~-i~v~~v~pg~v~T~~~~~  236 (248)
                      +++++++++.|+++. |+||+|+||+++|++...
T Consensus       156 ~~~~~~~la~e~~~~gi~v~~v~PG~v~t~~~~~  189 (263)
T 2a4k_A          156 VVGLARTLALELARKGVRVNVLLPGLIQTPMTAG  189 (263)
T ss_dssp             HHHHHHHHHHHHTTTTCEEEEEEECSBCCGGGTT
T ss_pred             HHHHHHHHHHHhhhhCcEEEEEEeCcCcCchhhh
Confidence            999999999999874 999999999999999765

>4e3z_A Putative oxidoreductase protein; PSI-biology, structural genomics, protein structure initiati nysgrc,oxidoreductase; 2.00A {Rhizobium etli}

Probab=100.00  E-value=3.2e-37  Score=261.02  Aligned_cols=189  Identities=31%  Similarity=0.462  Sum_probs=164.3

Q ss_pred             CCCEEEEcCCCChHHHHHHHHHHHcCCeEEEE-eCCcchHHHHHHHHHhhCCCcEEEEEccCCCHHHHHHHHHHHHhHcC
Q 044010           46 SGKVVIITGASSGIGEHLAYEYARRGACLALC-ARREKSLEEVADTAREIGSPDVITIRADVSKVDDCRSLVEETMNHFG  124 (248)
Q Consensus        46 ~~k~~lVtGg~~gIG~aia~~l~~~G~~V~l~-~r~~~~~~~~~~~l~~~~~~~v~~~~~D~~~~~~~~~~~~~~~~~~g  124 (248)
                      ++|++|||||++|||+++|++|+++|++|++. .|+.+..++..+++++.+. ++.++.+|++|.++++++++++.+++|
T Consensus        25 ~~k~vlITGas~gIG~a~a~~l~~~G~~V~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~Dl~~~~~v~~~~~~~~~~~g  103 (272)
T 4e3z_A           25 DTPVVLVTGGSRGIGAAVCRLAARQGWRVGVNYAANREAADAVVAAITESGG-EAVAIPGDVGNAADIAAMFSAVDRQFG  103 (272)
T ss_dssp             CSCEEEETTTTSHHHHHHHHHHHHTTCEEEEEESSCHHHHHHHHHHHHHTTC-EEEEEECCTTCHHHHHHHHHHHHHHHS
T ss_pred             CCCEEEEECCCchHHHHHHHHHHHCCCEEEEEcCCChhHHHHHHHHHHhcCC-cEEEEEcCCCCHHHHHHHHHHHHHhCC
Confidence            58999999999999999999999999999877 7777777777777776654 899999999999999999999999999


Q ss_pred             CccEEEEccccCCc-ccccccCChHHHHHHHHhhhHHHHHHHHHHhhhhhh----cCCeEEEEcCccccccCC-CCccch
Q 044010          125 RLDHLVNNAGISSV-ALFEDIVNITDFKQIMNINFWGSVYTTRFAVPHLRY----TKGKIVVLSSAASWLTAP-RMSFYN  198 (248)
Q Consensus       125 ~id~vv~~ag~~~~-~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~----~~g~iV~isS~~~~~~~~-~~~~Y~  198 (248)
                      ++|++|||||.... .++.+ .+.++|++.+++|+.+++.+++.+.|.|.+    .+|+||++||.++..+.+ +...|+
T Consensus       104 ~id~li~nAg~~~~~~~~~~-~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~~~~~~g~iv~isS~~~~~~~~~~~~~Y~  182 (272)
T 4e3z_A          104 RLDGLVNNAGIVDYPQRVDE-MSVERIERMLRVNVTGSILCAAEAVRRMSRLYSGQGGAIVNVSSMAAILGSATQYVDYA  182 (272)
T ss_dssp             CCCEEEECCCCCCCCCCGGG-CCHHHHHHHHHHHTHHHHHHHHHHHHHHCGGGTCCCEEEEEECCTHHHHCCTTTCHHHH
T ss_pred             CCCEEEECCCCCCCCCChhh-CCHHHHHHHHhhhhHHHHHHHHHHHHHHHHhccCCCCEEEEEcchHhccCCCCCcchhH
Confidence            99999999998765 44444 588999999999999999999999999865    358999999999887765 677899


Q ss_pred             HHHHHHHHHHHHHHHHhCC-CeEEEEEecCccccCcccc
Q 044010          199 ASKAALVLFFETLRVELGS-DVGVTIVTPGFIESELTQG  236 (248)
Q Consensus       199 ~sKaal~~l~~~la~~~~~-~i~v~~v~pg~v~T~~~~~  236 (248)
                      +||+|+++++++++.|+++ +|+|++|+||+|+|++...
T Consensus       183 asKaa~~~~~~~la~e~~~~gi~v~~v~PG~v~t~~~~~  221 (272)
T 4e3z_A          183 ASKAAIDTFTIGLAREVAAEGIRVNAVRPGIIETDLHAS  221 (272)
T ss_dssp             HHHHHHHHHHHHHHHHHGGGTEEEEEEEECSBC------
T ss_pred             HHHHHHHHHHHHHHHHHHHcCcEEEEEecCCCcCCcccc
Confidence            9999999999999999987 5999999999999998765

>2qhx_A Pteridine reductase 1; oxidoreductase, short-chain dehydrogenase/reductase, trypanosomatid, pterin salvage, drug resistance; HET: NAP FE1; 2.61A {Leishmania major} SCOP: c.2.1.2

Probab=100.00  E-value=3.3e-37  Score=267.94  Aligned_cols=189  Identities=23%  Similarity=0.258  Sum_probs=170.2

Q ss_pred             CCCCCEEEEcCCCChHHHHHHHHHHHcCCeEEEEe-CCcchHHHHHHHHHhhCCCcEEEEEccCCCHH------------
Q 044010           44 DVSGKVVIITGASSGIGEHLAYEYARRGACLALCA-RREKSLEEVADTAREIGSPDVITIRADVSKVD------------  110 (248)
Q Consensus        44 ~~~~k~~lVtGg~~gIG~aia~~l~~~G~~V~l~~-r~~~~~~~~~~~l~~~~~~~v~~~~~D~~~~~------------  110 (248)
                      ++++|++|||||++|||+++|++|+++|++|++++ |+.++.++..++++...+.++.++.+|++|.+            
T Consensus        43 ~l~~k~~lVTGas~GIG~aia~~La~~G~~Vv~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~Dl~d~~~~~~~~~~~~~~  122 (328)
T 2qhx_A           43 APTVPVALVTGAAKRLGRSIAEGLHAEGYAVCLHYHRSAAEANALSATLNARRPNSAITVQADLSNVATAPVSGADGSAP  122 (328)
T ss_dssp             --CCCEEEETTCSSHHHHHHHHHHHHTTCEEEEEESSCHHHHHHHHHHHHHHSTTCEEEEECCCSSSCBCC-------CC
T ss_pred             ccCCCEEEEECCCCHHHHHHHHHHHHCCCEEEEEcCCCHHHHHHHHHHHHhhcCCeEEEEEeeCCCchhccccccccccc
Confidence            48899999999999999999999999999999999 99888888888886333457899999999999            


Q ss_pred             -----HHHHHHHHHHhHcCCccEEEEccccCCcccccccCC--------------hHHHHHHHHhhhHHHHHHHHHHhhh
Q 044010          111 -----DCRSLVEETMNHFGRLDHLVNNAGISSVALFEDIVN--------------ITDFKQIMNINFWGSVYTTRFAVPH  171 (248)
Q Consensus       111 -----~~~~~~~~~~~~~g~id~vv~~ag~~~~~~~~~~~~--------------~~~~~~~~~~n~~~~~~l~~~~~~~  171 (248)
                           +++++++++.+++|++|++|||||.....++.+ .+              .++|++.+++|+.+++.+++.+.|.
T Consensus       123 ~~~~~~v~~~~~~~~~~~g~iD~lVnnAG~~~~~~~~~-~~~~~~e~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~  201 (328)
T 2qhx_A          123 VTLFTRCAELVAACYTHWGRCDVLVNNASSFYPTPLLR-NDEDGHEPCVGDREAMETATADLFGSNAIAPYFLIKAFAHR  201 (328)
T ss_dssp             BCHHHHHHHHHHHHHHHHSCCCEEEECCCCCCCCCSCC--------------CHHHHHHHHHHHHHTHHHHHHHHHHHHH
T ss_pred             cccHHHHHHHHHHHHHhcCCCCEEEECCCCCCCCChhh-cCccccccccccccccHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence                 999999999999999999999999876655544 35              7899999999999999999999999


Q ss_pred             hhhc-------CCeEEEEcCccccccCCCCccchHHHHHHHHHHHHHHHHhCC-CeEEEEEecCccccCc
Q 044010          172 LRYT-------KGKIVVLSSAASWLTAPRMSFYNASKAALVLFFETLRVELGS-DVGVTIVTPGFIESEL  233 (248)
Q Consensus       172 ~~~~-------~g~iV~isS~~~~~~~~~~~~Y~~sKaal~~l~~~la~~~~~-~i~v~~v~pg~v~T~~  233 (248)
                      |.++       .|+||++||..+..+.++..+|++||+++++|+++++.|+++ +|+||+|+||+|+|++
T Consensus       202 m~~~~~~~~~~~g~IV~isS~~~~~~~~~~~~Y~asKaal~~l~~~la~el~~~gIrvn~v~PG~v~T~~  271 (328)
T 2qhx_A          202 VAGTPAKHRGTNYSIINMVDAMTNQPLLGYTIYTMAKGALEGLTRSAALELAPLQIRVNGVGPGLSVLVD  271 (328)
T ss_dssp             HHHSCGGGSCSCEEEEEECCTTTTSCCTTCHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEESSBSCCC
T ss_pred             HHhcCCcCCCCCcEEEEECchhhccCCCCcHHHHHHHHHHHHHHHHHHHHHhhcCcEEEEEecCcccCCc
Confidence            9754       489999999999999999999999999999999999999987 4999999999999999

>3icc_A Putative 3-oxoacyl-(acyl carrier protein) reducta; structural genomics, putative 3-oxoacyl-(acyl carrier protei reductase, oxidoreductase; HET: NAP MES; 1.87A {Bacillus anthracis str}

Probab=100.00  E-value=2.8e-37  Score=258.39  Aligned_cols=193  Identities=28%  Similarity=0.464  Sum_probs=173.1

Q ss_pred             CCCCCEEEEcCCCChHHHHHHHHHHHcCCeEEEE-eCCcchHHHHHHHHHhhCCCcEEEEEccCCCHHHHHHHHHHHHhH
Q 044010           44 DVSGKVVIITGASSGIGEHLAYEYARRGACLALC-ARREKSLEEVADTAREIGSPDVITIRADVSKVDDCRSLVEETMNH  122 (248)
Q Consensus        44 ~~~~k~~lVtGg~~gIG~aia~~l~~~G~~V~l~-~r~~~~~~~~~~~l~~~~~~~v~~~~~D~~~~~~~~~~~~~~~~~  122 (248)
                      .+++|++|||||++|||+++|++|+++|++|+++ +|+.++.++..+++++.+. ++.++.+|++|.++++++++++.++
T Consensus         4 ~l~~k~vlITGas~gIG~~~a~~l~~~G~~v~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~D~~~~~~~~~~~~~~~~~   82 (255)
T 3icc_A            4 MLKGKVALVTGASRGIGRAIAKRLANDGALVAIHYGNRKEEAEETVYEIQSNGG-SAFSIGANLESLHGVEALYSSLDNE   82 (255)
T ss_dssp             TTTTCEEEETTCSSHHHHHHHHHHHHTTCEEEEEESSCSHHHHHHHHHHHHTTC-EEEEEECCTTSHHHHHHHHHHHHHH
T ss_pred             ccCCCEEEEECCCChHHHHHHHHHHHCCCeEEEEeCCchHHHHHHHHHHHhcCC-ceEEEecCcCCHHHHHHHHHHHHHH
Confidence            4689999999999999999999999999999885 6777778888888877654 7889999999999999999999887


Q ss_pred             cC------CccEEEEccccCCcccccccCChHHHHHHHHhhhHHHHHHHHHHhhhhhhcCCeEEEEcCccccccCCCCcc
Q 044010          123 FG------RLDHLVNNAGISSVALFEDIVNITDFKQIMNINFWGSVYTTRFAVPHLRYTKGKIVVLSSAASWLTAPRMSF  196 (248)
Q Consensus       123 ~g------~id~vv~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~g~iV~isS~~~~~~~~~~~~  196 (248)
                      ++      ++|++|||||........+ .+.++|++.+++|+.+++.+++.+.|.|+ ++|+||++||.++..+.++...
T Consensus        83 ~~~~~~~~~id~lv~nAg~~~~~~~~~-~~~~~~~~~~~~N~~g~~~l~~~~~~~~~-~~~~iv~isS~~~~~~~~~~~~  160 (255)
T 3icc_A           83 LQNRTGSTKFDILINNAGIGPGAFIEE-TTEQFFDRMVSVNAKAPFFIIQQALSRLR-DNSRIINISSAATRISLPDFIA  160 (255)
T ss_dssp             HHHHHSSSCEEEEEECCCCCCCBCGGG-CCHHHHHHHHHHHTHHHHHHHHHHTTTEE-EEEEEEEECCGGGTSCCTTBHH
T ss_pred             hcccccCCcccEEEECCCCCCCCChhh-CCHHHHHHHHhhhchHHHHHHHHHHHhhC-CCCEEEEeCChhhccCCCCcch
Confidence            64      4999999999876665555 57899999999999999999999999984 5689999999999999999999


Q ss_pred             chHHHHHHHHHHHHHHHHhCC-CeEEEEEecCccccCccccccc
Q 044010          197 YNASKAALVLFFETLRVELGS-DVGVTIVTPGFIESELTQGKFL  239 (248)
Q Consensus       197 Y~~sKaal~~l~~~la~~~~~-~i~v~~v~pg~v~T~~~~~~~~  239 (248)
                      |++||+|+++++++++.|+++ +|+||+|+||+++|+|.+....
T Consensus       161 Y~asKaa~~~~~~~la~e~~~~gi~v~~v~PG~v~t~~~~~~~~  204 (255)
T 3icc_A          161 YSMTKGAINTMTFTLAKQLGARGITVNAILPGFVKTDMNAELLS  204 (255)
T ss_dssp             HHHHHHHHHHHHHHHHHHHGGGTCEEEEEEECCBCCSSSTTTTT
T ss_pred             hHHhHHHHHHHHHHHHHHHHhcCeEEEEEEEeeecccchhhhcc
Confidence            999999999999999999987 4999999999999999876543

>2pd4_A Enoyl-[acyl-carrier-protein] reductase [NADH]; antibacterial target, type II fatty acid biosynthesis, enoyl-ACP-reductase, FABI; HET: NAD DCN; 2.30A {Helicobacter pylori} SCOP: c.2.1.2 PDB: 2pd3_A*

Probab=100.00  E-value=3.8e-37  Score=261.03  Aligned_cols=189  Identities=23%  Similarity=0.282  Sum_probs=169.0

Q ss_pred             CCCCCEEEEcCCC--ChHHHHHHHHHHHcCCeEEEEeCCcchHHHHHHHHHhhCCCcEEEEEccCCCHHHHHHHHHHHHh
Q 044010           44 DVSGKVVIITGAS--SGIGEHLAYEYARRGACLALCARREKSLEEVADTAREIGSPDVITIRADVSKVDDCRSLVEETMN  121 (248)
Q Consensus        44 ~~~~k~~lVtGg~--~gIG~aia~~l~~~G~~V~l~~r~~~~~~~~~~~l~~~~~~~v~~~~~D~~~~~~~~~~~~~~~~  121 (248)
                      ++++|++|||||+  +|||+++|++|+++|++|++++|+.+ .++..+++.+..+ .+.++.+|++|.++++++++++.+
T Consensus         3 ~l~~k~vlVTGas~~~gIG~~~a~~l~~~G~~V~~~~r~~~-~~~~~~~l~~~~~-~~~~~~~D~~~~~~v~~~~~~~~~   80 (275)
T 2pd4_A            3 FLKGKKGLIVGVANNKSIAYGIAQSCFNQGATLAFTYLNES-LEKRVRPIAQELN-SPYVYELDVSKEEHFKSLYNSVKK   80 (275)
T ss_dssp             TTTTCEEEEECCCSTTSHHHHHHHHHHTTTCEEEEEESSTT-THHHHHHHHHHTT-CCCEEECCTTCHHHHHHHHHHHHH
T ss_pred             CCCCCEEEEECCCCCCcHHHHHHHHHHHCCCEEEEEeCCHH-HHHHHHHHHHhcC-CcEEEEcCCCCHHHHHHHHHHHHH
Confidence            5789999999999  99999999999999999999999886 5555566655443 477899999999999999999999


Q ss_pred             HcCCccEEEEccccCCc----ccccccCChHHHHHHHHhhhHHHHHHHHHHhhhhhhcCCeEEEEcCccccccCCCCccc
Q 044010          122 HFGRLDHLVNNAGISSV----ALFEDIVNITDFKQIMNINFWGSVYTTRFAVPHLRYTKGKIVVLSSAASWLTAPRMSFY  197 (248)
Q Consensus       122 ~~g~id~vv~~ag~~~~----~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~g~iV~isS~~~~~~~~~~~~Y  197 (248)
                      ++|++|++|||||....    .++.+ .+.++|++.+++|+.+++.+++.+.|.|++ +|+||++||..+..+.++..+|
T Consensus        81 ~~g~id~lv~nAg~~~~~~~~~~~~~-~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~-~g~iv~isS~~~~~~~~~~~~Y  158 (275)
T 2pd4_A           81 DLGSLDFIVHSVAFAPKEALEGSLLE-TSKSAFNTAMEISVYSLIELTNTLKPLLNN-GASVLTLSYLGSTKYMAHYNVM  158 (275)
T ss_dssp             HTSCEEEEEECCCCCCGGGGSSCGGG-CCHHHHHHHHHHHTHHHHHHHHHHGGGEEE-EEEEEEEECGGGTSBCTTCHHH
T ss_pred             HcCCCCEEEECCccCccccCCCCccc-CCHHHHHHHHHHHhHHHHHHHHHHHHHhcc-CCEEEEEecchhcCCCCCchhh
Confidence            99999999999998754    33444 578999999999999999999999999964 5899999999999998999999


Q ss_pred             hHHHHHHHHHHHHHHHHhCC-CeEEEEEecCccccCcccc
Q 044010          198 NASKAALVLFFETLRVELGS-DVGVTIVTPGFIESELTQG  236 (248)
Q Consensus       198 ~~sKaal~~l~~~la~~~~~-~i~v~~v~pg~v~T~~~~~  236 (248)
                      ++||+++++++++++.|+++ +|+||+|+||+|+|++.+.
T Consensus       159 ~asK~a~~~~~~~la~e~~~~gi~v~~v~PG~v~T~~~~~  198 (275)
T 2pd4_A          159 GLAKAALESAVRYLAVDLGKHHIRVNALSAGPIRTLASSG  198 (275)
T ss_dssp             HHHHHHHHHHHHHHHHHHHTTTCEEEEEEECCCCCTTGGG
T ss_pred             HHHHHHHHHHHHHHHHHhhhcCeEEEEEeeCccccchhhh
Confidence            99999999999999999977 4999999999999999765

>3ak4_A NADH-dependent quinuclidinone reductase; SDR, (R)-3-quinuclidinol, chiral alcohol, oxidoreductase; HET: NAD; 2.00A {Agrobacterium tumefaciens}

Probab=100.00  E-value=3.2e-37  Score=259.70  Aligned_cols=189  Identities=26%  Similarity=0.422  Sum_probs=169.2

Q ss_pred             cCCCCCEEEEcCCCChHHHHHHHHHHHcCCeEEEEeCCcchHHHHHHHHHhhCCCcEEEEEccCCCHHHHHHHHHHHHhH
Q 044010           43 EDVSGKVVIITGASSGIGEHLAYEYARRGACLALCARREKSLEEVADTAREIGSPDVITIRADVSKVDDCRSLVEETMNH  122 (248)
Q Consensus        43 ~~~~~k~~lVtGg~~gIG~aia~~l~~~G~~V~l~~r~~~~~~~~~~~l~~~~~~~v~~~~~D~~~~~~~~~~~~~~~~~  122 (248)
                      +++++|++|||||++|||++++++|+++|++|++++|+.++.++..+++.    .++.++.+|++|.++++++++++.++
T Consensus         8 ~~l~~k~vlVTGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~~----~~~~~~~~D~~d~~~v~~~~~~~~~~   83 (263)
T 3ak4_A            8 FDLSGRKAIVTGGSKGIGAAIARALDKAGATVAIADLDVMAAQAVVAGLE----NGGFAVEVDVTKRASVDAAMQKAIDA   83 (263)
T ss_dssp             TCCTTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHTCT----TCCEEEECCTTCHHHHHHHHHHHHHH
T ss_pred             cCCCCCEEEEeCCCChHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHh----cCCeEEEEeCCCHHHHHHHHHHHHHH
Confidence            46889999999999999999999999999999999999876665544432    25778999999999999999999999


Q ss_pred             cCCccEEEEccccCCcccccccCChHHHHHHHHhhhHHHHHHHHHHhhhhhhc--CCeEEEEcCccccccCCCCccchHH
Q 044010          123 FGRLDHLVNNAGISSVALFEDIVNITDFKQIMNINFWGSVYTTRFAVPHLRYT--KGKIVVLSSAASWLTAPRMSFYNAS  200 (248)
Q Consensus       123 ~g~id~vv~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~--~g~iV~isS~~~~~~~~~~~~Y~~s  200 (248)
                      +|++|++|||||.....+..+ .+.++|++.+++|+.+++.+++++.|.|.+.  .|+||++||..+..+.++...|++|
T Consensus        84 ~g~iD~lv~~Ag~~~~~~~~~-~~~~~~~~~~~~n~~g~~~~~~~~~~~~~~~~~~g~iv~isS~~~~~~~~~~~~Y~~s  162 (263)
T 3ak4_A           84 LGGFDLLCANAGVSTMRPAVD-ITDEEWDFNFDVNARGVFLANQIACRHFLASNTKGVIVNTASLAAKVGAPLLAHYSAS  162 (263)
T ss_dssp             HTCCCEEEECCCCCCCCCGGG-CCHHHHHHHHHHHTHHHHHHHHHHHHHHHHTTCCCEEEEECCGGGTSCCTTCHHHHHH
T ss_pred             cCCCCEEEECCCcCCCCChhh-CCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcCCCeEEEEecccccccCCCCchhHHHH
Confidence            999999999999876655555 5789999999999999999999999998754  4899999999999888889999999


Q ss_pred             HHHHHHHHHHHHHHhCC-CeEEEEEecCccccCcccc
Q 044010          201 KAALVLFFETLRVELGS-DVGVTIVTPGFIESELTQG  236 (248)
Q Consensus       201 Kaal~~l~~~la~~~~~-~i~v~~v~pg~v~T~~~~~  236 (248)
                      |+++++++++++.|+++ +||||+|+||+++|++...
T Consensus       163 K~a~~~~~~~la~e~~~~gi~v~~v~Pg~v~t~~~~~  199 (263)
T 3ak4_A          163 KFAVFGWTQALAREMAPKNIRVNCVCPGFVKTAMQER  199 (263)
T ss_dssp             HHHHHHHHHHHHHHHGGGTCEEEEEEECSBTTHHHHH
T ss_pred             HHHHHHHHHHHHHHHhHcCeEEEEEecccccChhhhh
Confidence            99999999999999987 5999999999999998654

>3uxy_A Short-chain dehydrogenase/reductase SDR; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; HET: NAD; 2.10A {Rhodobacter sphaeroides}

Probab=100.00  E-value=1.2e-37  Score=263.25  Aligned_cols=183  Identities=23%  Similarity=0.372  Sum_probs=164.2

Q ss_pred             cCCCCCEEEEcCCCChHHHHHHHHHHHcCCeEEEEeCCcchHHHHHHHHHhhCCCcEEEEEccCCCHHHHHHHHHHHHhH
Q 044010           43 EDVSGKVVIITGASSGIGEHLAYEYARRGACLALCARREKSLEEVADTAREIGSPDVITIRADVSKVDDCRSLVEETMNH  122 (248)
Q Consensus        43 ~~~~~k~~lVtGg~~gIG~aia~~l~~~G~~V~l~~r~~~~~~~~~~~l~~~~~~~v~~~~~D~~~~~~~~~~~~~~~~~  122 (248)
                      .+++||++|||||++|||+++|++|+++|++|++++|+.+..+            ....+.+|++|.++++++++++.++
T Consensus        24 ~~l~gk~vlVTGas~gIG~aia~~la~~G~~V~~~~r~~~~~~------------~~~~~~~Dv~~~~~~~~~~~~~~~~   91 (266)
T 3uxy_A           24 QGFEGKVALVTGAAGGIGGAVVTALRAAGARVAVADRAVAGIA------------ADLHLPGDLREAAYADGLPGAVAAG   91 (266)
T ss_dssp             --CTTCEEEESSTTSHHHHHHHHHHHHTTCEEEECSSCCTTSC------------CSEECCCCTTSHHHHHHHHHHHHHH
T ss_pred             hCCCCCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEeCCHHHHH------------hhhccCcCCCCHHHHHHHHHHHHHh
Confidence            4789999999999999999999999999999999999875432            1234589999999999999999999


Q ss_pred             cCCccEEEEccccCCcccccccCChHHHHHHHHhhhHHHHHHHHHHhhhhhhc-CCeEEEEcCccccccCCCCccchHHH
Q 044010          123 FGRLDHLVNNAGISSVALFEDIVNITDFKQIMNINFWGSVYTTRFAVPHLRYT-KGKIVVLSSAASWLTAPRMSFYNASK  201 (248)
Q Consensus       123 ~g~id~vv~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~-~g~iV~isS~~~~~~~~~~~~Y~~sK  201 (248)
                      +|++|++|||||.....++.+ .+.++|++.+++|+.+++.++++++|.|+++ .|+||++||..+..+.++..+|++||
T Consensus        92 ~g~iD~lvnnAg~~~~~~~~~-~~~~~~~~~~~vN~~g~~~l~~~~~~~m~~~~~g~iv~isS~~~~~~~~~~~~Y~asK  170 (266)
T 3uxy_A           92 LGRLDIVVNNAGVISRGRITE-TTDADWSLSLGVNVEAPFRICRAAIPLMAAAGGGAIVNVASCWGLRPGPGHALYCLTK  170 (266)
T ss_dssp             HSCCCEEEECCCCCCCBCGGG-CCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEEECCSBTTBCCTTBHHHHHHH
T ss_pred             cCCCCEEEECCCCCCCCChhh-CCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcCCcEEEEECCHHhCCCCCCChHHHHHH
Confidence            999999999999987766655 5789999999999999999999999999754 58999999999999999999999999


Q ss_pred             HHHHHHHHHHHHHhCC-CeEEEEEecCccccCcccccc
Q 044010          202 AALVLFFETLRVELGS-DVGVTIVTPGFIESELTQGKF  238 (248)
Q Consensus       202 aal~~l~~~la~~~~~-~i~v~~v~pg~v~T~~~~~~~  238 (248)
                      +|+++++++++.|+++ +||||+|+||+++|+|.+...
T Consensus       171 aa~~~l~~~la~e~~~~gI~vn~v~PG~v~T~~~~~~~  208 (266)
T 3uxy_A          171 AALASLTQCMGMDHAPQGIRINAVCPNEVNTPMLRTGF  208 (266)
T ss_dssp             HHHHHHHHHHHHHHGGGTEEEEEEEESSBCCHHHHHHH
T ss_pred             HHHHHHHHHHHHHhhhcCcEEEEEeeCCCcchHhhhhh
Confidence            9999999999999987 499999999999999976543

>2wyu_A Enoyl-[acyl carrier protein] reductase; oxidoreductase, fatty acid biosynthesis, oxidation reduction; 1.50A {Thermus thermophilus} PDB: 1ulu_A 2wyv_A* 2wyw_A* 2yw9_A*

Probab=100.00  E-value=5.2e-37  Score=258.31  Aligned_cols=191  Identities=27%  Similarity=0.362  Sum_probs=169.2

Q ss_pred             ccCCCCCEEEEcCCC--ChHHHHHHHHHHHcCCeEEEEeCCcchHHHHHHHHHhhCCCcEEEEEccCCCHHHHHHHHHHH
Q 044010           42 SEDVSGKVVIITGAS--SGIGEHLAYEYARRGACLALCARREKSLEEVADTAREIGSPDVITIRADVSKVDDCRSLVEET  119 (248)
Q Consensus        42 ~~~~~~k~~lVtGg~--~gIG~aia~~l~~~G~~V~l~~r~~~~~~~~~~~l~~~~~~~v~~~~~D~~~~~~~~~~~~~~  119 (248)
                      ..++++|++|||||+  +|||++++++|+++|++|++++|+.+ .++..+++.+..+ .+.++.+|++|.++++++++++
T Consensus         3 ~~~l~~k~vlVTGas~~~gIG~~ia~~l~~~G~~V~~~~r~~~-~~~~~~~l~~~~~-~~~~~~~D~~~~~~v~~~~~~~   80 (261)
T 2wyu_A            3 TVDLSGKKALVMGVTNQRSLGFAIAAKLKEAGAEVALSYQAER-LRPEAEKLAEALG-GALLFRADVTQDEELDALFAGV   80 (261)
T ss_dssp             EECCTTCEEEEESCCSSSSHHHHHHHHHHHHTCEEEEEESCGG-GHHHHHHHHHHTT-CCEEEECCTTCHHHHHHHHHHH
T ss_pred             ccCCCCCEEEEECCCCCCcHHHHHHHHHHHCCCEEEEEcCCHH-HHHHHHHHHHhcC-CcEEEECCCCCHHHHHHHHHHH
Confidence            357899999999999  99999999999999999999999875 4555556655433 3788999999999999999999


Q ss_pred             HhHcCCccEEEEccccCCc----ccccccCChHHHHHHHHhhhHHHHHHHHHHhhhhhhcCCeEEEEcCccccccCCCCc
Q 044010          120 MNHFGRLDHLVNNAGISSV----ALFEDIVNITDFKQIMNINFWGSVYTTRFAVPHLRYTKGKIVVLSSAASWLTAPRMS  195 (248)
Q Consensus       120 ~~~~g~id~vv~~ag~~~~----~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~g~iV~isS~~~~~~~~~~~  195 (248)
                      .+++|++|++|||||....    .++.+ .+.++|++.+++|+.+++++++++.|.|++ +|+||++||..+..+.++..
T Consensus        81 ~~~~g~iD~lv~~Ag~~~~~~~~~~~~~-~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~-~g~iv~isS~~~~~~~~~~~  158 (261)
T 2wyu_A           81 KEAFGGLDYLVHAIAFAPREAMEGRYID-TRRQDWLLALEVSAYSLVAVARRAEPLLRE-GGGIVTLTYYASEKVVPKYN  158 (261)
T ss_dssp             HHHHSSEEEEEECCCCCCHHHHSSCGGG-CCHHHHHHHHHHHTHHHHHHHHHHTTTEEE-EEEEEEEECGGGTSBCTTCH
T ss_pred             HHHcCCCCEEEECCCCCCcccCCCCccc-CCHHHHHHHHHHhhHHHHHHHHHHHHHhcc-CCEEEEEecccccCCCCCch
Confidence            9999999999999998754    33444 578999999999999999999999999863 58999999999998888899


Q ss_pred             cchHHHHHHHHHHHHHHHHhCC-CeEEEEEecCccccCcccc
Q 044010          196 FYNASKAALVLFFETLRVELGS-DVGVTIVTPGFIESELTQG  236 (248)
Q Consensus       196 ~Y~~sKaal~~l~~~la~~~~~-~i~v~~v~pg~v~T~~~~~  236 (248)
                      .|++||+++++++++++.|+++ +||||+|+||+++|++...
T Consensus       159 ~Y~asK~a~~~~~~~la~e~~~~gi~v~~v~Pg~v~t~~~~~  200 (261)
T 2wyu_A          159 VMAIAKAALEASVRYLAYELGPKGVRVNAISAGPVRTVAARS  200 (261)
T ss_dssp             HHHHHHHHHHHHHHHHHHHHGGGTCEEEEEEECCCCCTGGGG
T ss_pred             HHHHHHHHHHHHHHHHHHHHhhhCcEEEEEeeCCCcCchhhh
Confidence            9999999999999999999987 4999999999999998754

>2dtx_A Glucose 1-dehydrogenase related protein; rossmann fold, oxidoreductase; HET: BMA; 1.60A {Thermoplasma acidophilum} PDB: 2dtd_A* 2dte_A* 2zk7_A

Probab=100.00  E-value=7.9e-37  Score=257.81  Aligned_cols=181  Identities=27%  Similarity=0.476  Sum_probs=165.5

Q ss_pred             cCCCCCEEEEcCCCChHHHHHHHHHHHcCCeEEEEeCCcchHHHHHHHHHhhCCCcEEEEEccCCCHHHHHHHHHHHHhH
Q 044010           43 EDVSGKVVIITGASSGIGEHLAYEYARRGACLALCARREKSLEEVADTAREIGSPDVITIRADVSKVDDCRSLVEETMNH  122 (248)
Q Consensus        43 ~~~~~k~~lVtGg~~gIG~aia~~l~~~G~~V~l~~r~~~~~~~~~~~l~~~~~~~v~~~~~D~~~~~~~~~~~~~~~~~  122 (248)
                      .++++|++|||||++|||++++++|+++|++|++++|+.++            +.++.++.+|++|.++++++++++.++
T Consensus         4 ~~l~~k~vlVTGas~gIG~~ia~~l~~~G~~V~~~~r~~~~------------~~~~~~~~~Dl~~~~~v~~~~~~~~~~   71 (264)
T 2dtx_A            4 SDLRDKVVIVTGASMGIGRAIAERFVDEGSKVIDLSIHDPG------------EAKYDHIECDVTNPDQVKASIDHIFKE   71 (264)
T ss_dssp             GGGTTCEEEEESCSSHHHHHHHHHHHHTTCEEEEEESSCCC------------SCSSEEEECCTTCHHHHHHHHHHHHHH
T ss_pred             cccCCCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEecCccc------------CCceEEEEecCCCHHHHHHHHHHHHHH
Confidence            36889999999999999999999999999999999998764            236788999999999999999999999


Q ss_pred             cCCccEEEEccccCCcccccccCChHHHHHHHHhhhHHHHHHHHHHhhhhhhcC-CeEEEEcCccccccCCCCccchHHH
Q 044010          123 FGRLDHLVNNAGISSVALFEDIVNITDFKQIMNINFWGSVYTTRFAVPHLRYTK-GKIVVLSSAASWLTAPRMSFYNASK  201 (248)
Q Consensus       123 ~g~id~vv~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~-g~iV~isS~~~~~~~~~~~~Y~~sK  201 (248)
                      +|++|++|||||.....++.+ .+.++|++.+++|+.+++.+++.+.|.|++++ |+||++||..+..+.++...|++||
T Consensus        72 ~g~iD~lv~~Ag~~~~~~~~~-~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~~~g~iv~isS~~~~~~~~~~~~Y~~sK  150 (264)
T 2dtx_A           72 YGSISVLVNNAGIESYGKIES-MSMGEWRRIIDVNLFGYYYASKFAIPYMIRSRDPSIVNISSVQASIITKNASAYVTSK  150 (264)
T ss_dssp             HSCCCEEEECCCCCCCBCTTT-SCHHHHHHHHHHHTHHHHHHHHHHHHHHTTSSSCEEEEECCGGGTSCCTTBHHHHHHH
T ss_pred             cCCCCEEEECCCCCCCCCccc-CCHHHHHHHHHHhhHHHHHHHHHHHHHHHHcCCcEEEEECCchhccCCCCchhHHHHH
Confidence            999999999999876665555 57899999999999999999999999997554 8999999999999989999999999


Q ss_pred             HHHHHHHHHHHHHhCCCeEEEEEecCccccCcccc
Q 044010          202 AALVLFFETLRVELGSDVGVTIVTPGFIESELTQG  236 (248)
Q Consensus       202 aal~~l~~~la~~~~~~i~v~~v~pg~v~T~~~~~  236 (248)
                      +++++++++++.|+++.||||+|+||+++|++...
T Consensus       151 ~a~~~~~~~la~e~~~~i~vn~v~PG~v~t~~~~~  185 (264)
T 2dtx_A          151 HAVIGLTKSIALDYAPLLRCNAVCPATIDTPLVRK  185 (264)
T ss_dssp             HHHHHHHHHHHHHHTTTSEEEEEEECSBCSHHHHH
T ss_pred             HHHHHHHHHHHHHhcCCcEEEEEEeCCCcCcchhh
Confidence            99999999999999766999999999999998754

>1qsg_A Enoyl-[acyl-carrier-protein] reductase; enoyl reductase, oxidoreductase; HET: GLC NAD TCL; 1.75A {Escherichia coli} SCOP: c.2.1.2 PDB: 1c14_A* 1i2z_A* 1i30_A* 1lx6_A* 1lxc_A* 1mfp_A* 2fhs_A 1qg6_A* 1dfg_A* 1dfh_A* 1d8a_A* 1dfi_A* 3pje_A* 3pjd_A* 3pjf_A*

Probab=100.00  E-value=9.6e-37  Score=257.14  Aligned_cols=190  Identities=20%  Similarity=0.258  Sum_probs=167.4

Q ss_pred             CCCCCEEEEcCCC--ChHHHHHHHHHHHcCCeEEEEeCCcchHHHHHHHHHhhCCCcEEEEEccCCCHHHHHHHHHHHHh
Q 044010           44 DVSGKVVIITGAS--SGIGEHLAYEYARRGACLALCARREKSLEEVADTAREIGSPDVITIRADVSKVDDCRSLVEETMN  121 (248)
Q Consensus        44 ~~~~k~~lVtGg~--~gIG~aia~~l~~~G~~V~l~~r~~~~~~~~~~~l~~~~~~~v~~~~~D~~~~~~~~~~~~~~~~  121 (248)
                      ++++|++|||||+  +|||+++|++|+++|++|++++|+. +.++..+++.+..+ ...++.+|++|.++++++++++.+
T Consensus         6 ~l~~k~vlVTGas~~~gIG~~ia~~l~~~G~~V~~~~r~~-~~~~~~~~l~~~~~-~~~~~~~D~~~~~~v~~~~~~~~~   83 (265)
T 1qsg_A            6 FLSGKRILVTGVASKLSIAYGIAQAMHREGAELAFTYQND-KLKGRVEEFAAQLG-SDIVLQCDVAEDASIDTMFAELGK   83 (265)
T ss_dssp             TTTTCEEEECCCCSTTSHHHHHHHHHHHTTCEEEEEESST-TTHHHHHHHHHHTT-CCCEEECCTTCHHHHHHHHHHHHT
T ss_pred             ccCCCEEEEECCCCCCCHHHHHHHHHHHCCCEEEEEcCcH-HHHHHHHHHHHhcC-CcEEEEccCCCHHHHHHHHHHHHH
Confidence            4889999999999  9999999999999999999999987 55555666655443 347899999999999999999999


Q ss_pred             HcCCccEEEEccccCCc----ccccccCChHHHHHHHHhhhHHHHHHHHHHhhhhhhcCCeEEEEcCccccccCCCCccc
Q 044010          122 HFGRLDHLVNNAGISSV----ALFEDIVNITDFKQIMNINFWGSVYTTRFAVPHLRYTKGKIVVLSSAASWLTAPRMSFY  197 (248)
Q Consensus       122 ~~g~id~vv~~ag~~~~----~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~g~iV~isS~~~~~~~~~~~~Y  197 (248)
                      ++|++|++|||||...+    .++.+..+.++|++.+++|+.+++++++++.|.|.+ +|+||++||..+..+.++..+|
T Consensus        84 ~~g~iD~lv~~Ag~~~~~~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~-~g~iv~isS~~~~~~~~~~~~Y  162 (265)
T 1qsg_A           84 VWPKFDGFVHSIGFAPGDQLDGDYVNAVTREGFKIAHDISSYSFVAMAKACRSMLNP-GSALLTLSYLGAERAIPNYNVM  162 (265)
T ss_dssp             TCSSEEEEEECCCCCCGGGGSSCHHHHCCHHHHHHHHHHHTHHHHHHHHHHGGGEEE-EEEEEEEECGGGTSBCTTTTHH
T ss_pred             HcCCCCEEEECCCCCCccccCCCccccCCHHHHHHHHHHHhHHHHHHHHHHHHHhcc-CCEEEEEcchhhccCCCCchHH
Confidence            99999999999998753    333320467999999999999999999999999863 5899999999999998899999


Q ss_pred             hHHHHHHHHHHHHHHHHhCCC-eEEEEEecCccccCcccc
Q 044010          198 NASKAALVLFFETLRVELGSD-VGVTIVTPGFIESELTQG  236 (248)
Q Consensus       198 ~~sKaal~~l~~~la~~~~~~-i~v~~v~pg~v~T~~~~~  236 (248)
                      ++||+++++++++++.|+++. ||||+|+||+++|++.+.
T Consensus       163 ~~sK~a~~~~~~~la~e~~~~gi~v~~v~PG~v~t~~~~~  202 (265)
T 1qsg_A          163 GLAKASLEANVRYMANAMGPEGVRVNAISAGPIRTLAASG  202 (265)
T ss_dssp             HHHHHHHHHHHHHHHHHHTTTTEEEEEEEECCCCCTTGGG
T ss_pred             HHHHHHHHHHHHHHHHHhhhcCeEEEEEEeCCCccchhhc
Confidence            999999999999999999874 999999999999998764

>1gee_A Glucose 1-dehydrogenase; short-chain dehydrogenase/reductase, oxidoreductase; HET: NAD; 1.60A {Bacillus megaterium} SCOP: c.2.1.2 PDB: 1rwb_A* 1gco_A* 1g6k_A* 3aus_A 3aut_A* 3auu_A*

Probab=100.00  E-value=2.4e-36  Score=253.62  Aligned_cols=193  Identities=29%  Similarity=0.536  Sum_probs=174.1

Q ss_pred             cCCCCCEEEEcCCCChHHHHHHHHHHHcCCeEEEEeC-CcchHHHHHHHHHhhCCCcEEEEEccCCCHHHHHHHHHHHHh
Q 044010           43 EDVSGKVVIITGASSGIGEHLAYEYARRGACLALCAR-REKSLEEVADTAREIGSPDVITIRADVSKVDDCRSLVEETMN  121 (248)
Q Consensus        43 ~~~~~k~~lVtGg~~gIG~aia~~l~~~G~~V~l~~r-~~~~~~~~~~~l~~~~~~~v~~~~~D~~~~~~~~~~~~~~~~  121 (248)
                      .++++|++|||||++|||++++++|+++|++|++++| +.++.++..+++++.+. ++.++.+|++|.++++++++++.+
T Consensus         3 ~~l~~k~vlITGasggiG~~~a~~l~~~G~~V~~~~r~~~~~~~~~~~~l~~~~~-~~~~~~~D~~~~~~~~~~~~~~~~   81 (261)
T 1gee_A            3 KDLEGKVVVITGSSTGLGKSMAIRFATEKAKVVVNYRSKEDEANSVLEEIKKVGG-EAIAVKGDVTVESDVINLVQSAIK   81 (261)
T ss_dssp             GGGTTCEEEETTCSSHHHHHHHHHHHHTTCEEEEEESSCHHHHHHHHHHHHHTTC-EEEEEECCTTSHHHHHHHHHHHHH
T ss_pred             CCCCCCEEEEeCCCChHHHHHHHHHHHCCCEEEEEcCCChHHHHHHHHHHHhcCC-ceEEEECCCCCHHHHHHHHHHHHH
Confidence            4689999999999999999999999999999999999 77777777777765543 788999999999999999999999


Q ss_pred             HcCCccEEEEccccCCcccccccCChHHHHHHHHhhhHHHHHHHHHHhhhhhhc--CCeEEEEcCccccccCCCCccchH
Q 044010          122 HFGRLDHLVNNAGISSVALFEDIVNITDFKQIMNINFWGSVYTTRFAVPHLRYT--KGKIVVLSSAASWLTAPRMSFYNA  199 (248)
Q Consensus       122 ~~g~id~vv~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~--~g~iV~isS~~~~~~~~~~~~Y~~  199 (248)
                      ++|++|++|||||.....+..+ .+.++|++.+++|+.+++.+++.+.|.|.+.  .++||++||..+..+.++...|++
T Consensus        82 ~~g~id~li~~Ag~~~~~~~~~-~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~~~~~~~iv~isS~~~~~~~~~~~~Y~~  160 (261)
T 1gee_A           82 EFGKLDVMINNAGLENPVSSHE-MSLSDWNKVIDTNLTGAFLGSREAIKYFVENDIKGTVINMSSVHEKIPWPLFVHYAA  160 (261)
T ss_dssp             HHSCCCEEEECCCCCCCCCGGG-CCHHHHHHHHHHHTHHHHHHHHHHHHHHHHTTCCCEEEEECCGGGTSCCTTCHHHHH
T ss_pred             HcCCCCEEEECCCCCCCCCccc-CCHHHHHHHHHhhhHHHHHHHHHHHHHHHhCCCCCEEEEeCCHHhcCCCCCccHHHH
Confidence            9999999999999876655554 4779999999999999999999999998754  489999999999988889999999


Q ss_pred             HHHHHHHHHHHHHHHhCC-CeEEEEEecCccccCccccc
Q 044010          200 SKAALVLFFETLRVELGS-DVGVTIVTPGFIESELTQGK  237 (248)
Q Consensus       200 sKaal~~l~~~la~~~~~-~i~v~~v~pg~v~T~~~~~~  237 (248)
                      ||++++.++++++.++++ +|+|++|+||+++|++....
T Consensus       161 sK~a~~~~~~~la~e~~~~gi~v~~v~Pg~v~t~~~~~~  199 (261)
T 1gee_A          161 SKGGMKLMTETLALEYAPKGIRVNNIGPGAINTPINAEK  199 (261)
T ss_dssp             HHHHHHHHHHHHHHHHGGGTCEEEEEEECSBCSGGGHHH
T ss_pred             HHHHHHHHHHHHHHHhcccCeEEEEEeeCCcCCchhhhc
Confidence            999999999999999976 59999999999999997643

>3ppi_A 3-hydroxyacyl-COA dehydrogenase type-2; ssgcid, dehydrogenas mycobacterium avium, structural genomics; 2.00A {Mycobacterium avium}

Probab=100.00  E-value=8.3e-37  Score=259.53  Aligned_cols=191  Identities=18%  Similarity=0.312  Sum_probs=169.8

Q ss_pred             ccCCCCCEEEEcCCCChHHHHHHHHHHHcCCeEEEEeCCcchHHHHHHHHHhhCCCcEEEEEccCCCHHHHHHHHHHHHh
Q 044010           42 SEDVSGKVVIITGASSGIGEHLAYEYARRGACLALCARREKSLEEVADTAREIGSPDVITIRADVSKVDDCRSLVEETMN  121 (248)
Q Consensus        42 ~~~~~~k~~lVtGg~~gIG~aia~~l~~~G~~V~l~~r~~~~~~~~~~~l~~~~~~~v~~~~~D~~~~~~~~~~~~~~~~  121 (248)
                      .++++||++|||||++|||+++|++|+++|++|++++|+.++.++..+++    +.++.++.+|++|.++++++++++ +
T Consensus        25 ~~~l~~k~vlVTGas~GIG~aia~~l~~~G~~Vi~~~r~~~~~~~~~~~~----~~~~~~~~~Dl~~~~~v~~~~~~~-~   99 (281)
T 3ppi_A           25 IKQFEGASAIVSGGAGGLGEATVRRLHADGLGVVIADLAAEKGKALADEL----GNRAEFVSTNVTSEDSVLAAIEAA-N   99 (281)
T ss_dssp             CGGGTTEEEEEETTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHH----CTTEEEEECCTTCHHHHHHHHHHH-T
T ss_pred             hhccCCCEEEEECCCChHHHHHHHHHHHCCCEEEEEeCChHHHHHHHHHh----CCceEEEEcCCCCHHHHHHHHHHH-H
Confidence            35789999999999999999999999999999999999988877777666    247899999999999999999999 8


Q ss_pred             HcCCccEEEEc-cccCCccccc----ccCChHHHHHHHHhhhHHHHHHHHHHhhhhhh-------cCCeEEEEcCccccc
Q 044010          122 HFGRLDHLVNN-AGISSVALFE----DIVNITDFKQIMNINFWGSVYTTRFAVPHLRY-------TKGKIVVLSSAASWL  189 (248)
Q Consensus       122 ~~g~id~vv~~-ag~~~~~~~~----~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~-------~~g~iV~isS~~~~~  189 (248)
                      +++++|++||| +|........    +..+.++|++.+++|+.+++++++.+.+.|.+       .+|+||++||..+..
T Consensus       100 ~~~~id~lv~~aag~~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~~~~g~iv~isS~~~~~  179 (281)
T 3ppi_A          100 QLGRLRYAVVAHGGFGVAQRIVQRDGSPADMGGFTKTIDLYLNGTYNVARLVAASIAAAEPRENGERGALVLTASIAGYE  179 (281)
T ss_dssp             TSSEEEEEEECCCCCCCCCCSBCTTSCBCCHHHHHHHHHHHTHHHHHHHHHHHHHHHTSCCCTTSCCEEEEEECCGGGTS
T ss_pred             HhCCCCeEEEccCcccccccccccccccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhhcccccCCCeEEEEEecccccC
Confidence            88999999999 5554433332    23577999999999999999999999999864       358999999999999


Q ss_pred             cCCCCccchHHHHHHHHHHHHHHHHhCC-CeEEEEEecCccccCccccc
Q 044010          190 TAPRMSFYNASKAALVLFFETLRVELGS-DVGVTIVTPGFIESELTQGK  237 (248)
Q Consensus       190 ~~~~~~~Y~~sKaal~~l~~~la~~~~~-~i~v~~v~pg~v~T~~~~~~  237 (248)
                      +.++...|++||+|+++++++++.|+++ +|+||+|+||+|+|++.+..
T Consensus       180 ~~~~~~~Y~asKaa~~~~~~~la~e~~~~gi~v~~v~PG~v~T~~~~~~  228 (281)
T 3ppi_A          180 GQIGQTAYAAAKAGVIGLTIAAARDLSSAGIRVNTIAPGTMKTPIMESV  228 (281)
T ss_dssp             CCTTCHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECSBCCHHHHTT
T ss_pred             CCCCCcccHHHHHHHHHHHHHHHHHHhhcCeEEEEEecCcCCchhhhcc
Confidence            9999999999999999999999999987 49999999999999988754

>2fwm_X 2,3-dihydro-2,3-dihydroxybenzoate dehydrogenase; enterobactin, rossman fold, chorismate metabolism, short-CHA oxidoreductase, tetramer; 2.00A {Escherichia coli}

Probab=100.00  E-value=1.7e-36  Score=253.61  Aligned_cols=183  Identities=28%  Similarity=0.361  Sum_probs=158.9

Q ss_pred             cCCCCCEEEEcCCCChHHHHHHHHHHHcCCeEEEEeCCcchHHHHHHHHHhhCCCcEEEEEccCCCHHHHHHHHHHHHhH
Q 044010           43 EDVSGKVVIITGASSGIGEHLAYEYARRGACLALCARREKSLEEVADTAREIGSPDVITIRADVSKVDDCRSLVEETMNH  122 (248)
Q Consensus        43 ~~~~~k~~lVtGg~~gIG~aia~~l~~~G~~V~l~~r~~~~~~~~~~~l~~~~~~~v~~~~~D~~~~~~~~~~~~~~~~~  122 (248)
                      +++++|++|||||++|||++++++|+++|++|++++|+.+.        ++ .  .+..+.+|++|.++++++++++.++
T Consensus         3 m~l~~k~vlVTGas~giG~~ia~~l~~~G~~V~~~~r~~~~--------~~-~--~~~~~~~D~~d~~~~~~~~~~~~~~   71 (250)
T 2fwm_X            3 MDFSGKNVWVTGAGKGIGYATALAFVEAGAKVTGFDQAFTQ--------EQ-Y--PFATEVMDVADAAQVAQVCQRLLAE   71 (250)
T ss_dssp             CCCTTCEEEEESTTSHHHHHHHHHHHHTTCEEEEEESCCCS--------SC-C--SSEEEECCTTCHHHHHHHHHHHHHH
T ss_pred             CCCCCCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEeCchhh--------hc-C--CceEEEcCCCCHHHHHHHHHHHHHH
Confidence            56899999999999999999999999999999999998752        11 1  2678899999999999999999999


Q ss_pred             cCCccEEEEccccCCcccccccCChHHHHHHHHhhhHHHHHHHHHHhhhhhhc-CCeEEEEcCccccccCCCCccchHHH
Q 044010          123 FGRLDHLVNNAGISSVALFEDIVNITDFKQIMNINFWGSVYTTRFAVPHLRYT-KGKIVVLSSAASWLTAPRMSFYNASK  201 (248)
Q Consensus       123 ~g~id~vv~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~-~g~iV~isS~~~~~~~~~~~~Y~~sK  201 (248)
                      +|++|++|||||.....++.+ .+.++|++.+++|+.+++.+++++.|.|+++ .|+||++||..+..+.++...|++||
T Consensus        72 ~g~id~lv~~Ag~~~~~~~~~-~~~~~~~~~~~~N~~g~~~~~~~~~~~m~~~~~g~iv~isS~~~~~~~~~~~~Y~~sK  150 (250)
T 2fwm_X           72 TERLDALVNAAGILRMGATDQ-LSKEDWQQTFAVNVGGAFNLFQQTMNQFRRQRGGAIVTVASDAAHTPRIGMSAYGASK  150 (250)
T ss_dssp             CSCCCEEEECCCCCCCCCTTT-SCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCCEEEEECCGGGTSCCTTCHHHHHHH
T ss_pred             cCCCCEEEECCCcCCCCCccc-CCHHHHHHHHHHccHHHHHHHHHHHHHHHhcCCCEEEEECchhhCCCCCCCchHHHHH
Confidence            999999999999876655555 5789999999999999999999999999754 59999999999999989999999999


Q ss_pred             HHHHHHHHHHHHHhCC-CeEEEEEecCccccCccccc
Q 044010          202 AALVLFFETLRVELGS-DVGVTIVTPGFIESELTQGK  237 (248)
Q Consensus       202 aal~~l~~~la~~~~~-~i~v~~v~pg~v~T~~~~~~  237 (248)
                      +++++++++++.|+++ +||||+|+||+++|++....
T Consensus       151 ~a~~~~~~~la~e~~~~gi~v~~v~Pg~v~t~~~~~~  187 (250)
T 2fwm_X          151 AALKSLALSVGLELAGSGVRCNVVSPGSTDTDMQRTL  187 (250)
T ss_dssp             HHHHHHHHHHHHHHGGGTCEEEEEEECCC--------
T ss_pred             HHHHHHHHHHHHHhCccCCEEEEEECCcccCcccccc
Confidence            9999999999999987 59999999999999997643

>2o23_A HADH2 protein; HSD17B10, schad, ERAB, type II HADH, 2-methyl-3-hydroxybuTyr dehydrogenase, MHBD, structural genomics, structural genomi consortium; HET: NAD GOL; 1.20A {Homo sapiens} SCOP: c.2.1.2 PDB: 1so8_A 1u7t_A* 1e3s_A* 1e3w_B* 1e3w_A* 1e6w_A*

Probab=100.00  E-value=2.2e-36  Score=254.16  Aligned_cols=190  Identities=25%  Similarity=0.389  Sum_probs=168.6

Q ss_pred             cCCCCCEEEEcCCCChHHHHHHHHHHHcCCeEEEEeCCcchHHHHHHHHHhhCCCcEEEEEccCCCHHHHHHHHHHHHhH
Q 044010           43 EDVSGKVVIITGASSGIGEHLAYEYARRGACLALCARREKSLEEVADTAREIGSPDVITIRADVSKVDDCRSLVEETMNH  122 (248)
Q Consensus        43 ~~~~~k~~lVtGg~~gIG~aia~~l~~~G~~V~l~~r~~~~~~~~~~~l~~~~~~~v~~~~~D~~~~~~~~~~~~~~~~~  122 (248)
                      +++++|+++||||++|||++++++|+++|++|++++|+.++.++..+++   + .++.++.+|++|.++++++++++.++
T Consensus         8 ~~~~~k~vlVTGasggiG~~~a~~l~~~G~~V~~~~r~~~~~~~~~~~~---~-~~~~~~~~D~~~~~~v~~~~~~~~~~   83 (265)
T 2o23_A            8 RSVKGLVAVITGGASGLGLATAERLVGQGASAVLLDLPNSGGEAQAKKL---G-NNCVFAPADVTSEKDVQTALALAKGK   83 (265)
T ss_dssp             CCCTTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEECTTSSHHHHHHHH---C-TTEEEEECCTTCHHHHHHHHHHHHHH
T ss_pred             cCCCCCEEEEECCCChHHHHHHHHHHHCCCEEEEEeCCcHhHHHHHHHh---C-CceEEEEcCCCCHHHHHHHHHHHHHH
Confidence            5789999999999999999999999999999999999988877766655   2 37899999999999999999999999


Q ss_pred             cCCccEEEEccccCCcccccc-----cCChHHHHHHHHhhhHHHHHHHHHHhhhhhhc-------CCeEEEEcCcccccc
Q 044010          123 FGRLDHLVNNAGISSVALFED-----IVNITDFKQIMNINFWGSVYTTRFAVPHLRYT-------KGKIVVLSSAASWLT  190 (248)
Q Consensus       123 ~g~id~vv~~ag~~~~~~~~~-----~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~-------~g~iV~isS~~~~~~  190 (248)
                      +|++|++|||||.....+..+     ..+.++|++.+++|+.+++.+++.+.|.|.++       .++||++||..+..+
T Consensus        84 ~g~id~li~~Ag~~~~~~~~~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~~~~~~~~~~~~iv~isS~~~~~~  163 (265)
T 2o23_A           84 FGRVDVAVNCAGIAVASKTYNLKKGQTHTLEDFQRVLDVNLMGTFNVIRLVAGEMGQNEPDQGGQRGVIINTASVAAFEG  163 (265)
T ss_dssp             HSCCCEEEECCCCCCCCCSEETTTTEECCHHHHHHHHHHHTHHHHHHHHHHHHHHTTSCCCTTSCCEEEEEECCTHHHHC
T ss_pred             CCCCCEEEECCccCCCCccccccccCCCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcccccCCCCcEEEEeCChhhcCC
Confidence            999999999999876554432     24679999999999999999999999998754       489999999999988


Q ss_pred             CCCCccchHHHHHHHHHHHHHHHHhCC-CeEEEEEecCccccCcccc
Q 044010          191 APRMSFYNASKAALVLFFETLRVELGS-DVGVTIVTPGFIESELTQG  236 (248)
Q Consensus       191 ~~~~~~Y~~sKaal~~l~~~la~~~~~-~i~v~~v~pg~v~T~~~~~  236 (248)
                      .++...|++||++++.++++++.|+++ +|+||+|+||+++|++.+.
T Consensus       164 ~~~~~~Y~~sK~a~~~~~~~la~e~~~~gi~v~~v~Pg~v~t~~~~~  210 (265)
T 2o23_A          164 QVGQAAYSASKGGIVGMTLPIARDLAPIGIRVMTIAPGLFGTPLLTS  210 (265)
T ss_dssp             CTTCHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECCBCCC----
T ss_pred             CCCCchhHHHHHHHHHHHHHHHHHHhhcCcEEEEEEeccccCccccc
Confidence            889999999999999999999999987 4999999999999999764

>2pnf_A 3-oxoacyl-[acyl-carrier-protein] reductase; short chain oxidoreductase, rossmann fold, oxidoreductase; HET: 1PE MES; 1.80A {Aquifex aeolicus} PDB: 2p68_A*

Probab=100.00  E-value=1.9e-36  Score=252.09  Aligned_cols=194  Identities=27%  Similarity=0.415  Sum_probs=174.0

Q ss_pred             ccCCCCCEEEEcCCCChHHHHHHHHHHHcCCeEEEEeCCcchHHHHHHHHHhhCCCcEEEEEccCCCHHHHHHHHHHHHh
Q 044010           42 SEDVSGKVVIITGASSGIGEHLAYEYARRGACLALCARREKSLEEVADTAREIGSPDVITIRADVSKVDDCRSLVEETMN  121 (248)
Q Consensus        42 ~~~~~~k~~lVtGg~~gIG~aia~~l~~~G~~V~l~~r~~~~~~~~~~~l~~~~~~~v~~~~~D~~~~~~~~~~~~~~~~  121 (248)
                      ..++++|+++||||++|||++++++|+++|++|++++|+.++.++..+++++..+.++.++.+|++|.++++++++++.+
T Consensus         2 ~~~~~~~~vlVtGasggiG~~la~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~   81 (248)
T 2pnf_A            2 EIKLQGKVSLVTGSTRGIGRAIAEKLASAGSTVIITGTSGERAKAVAEEIANKYGVKAHGVEMNLLSEESINKAFEEIYN   81 (248)
T ss_dssp             CCCCTTCEEEETTCSSHHHHHHHHHHHHTTCEEEEEESSHHHHHHHHHHHHHHHCCCEEEEECCTTCHHHHHHHHHHHHH
T ss_pred             ccccCCCEEEEECCCchHHHHHHHHHHHCCCEEEEEeCChHHHHHHHHHHHhhcCCceEEEEccCCCHHHHHHHHHHHHH
Confidence            35789999999999999999999999999999999999988887777777653234788999999999999999999999


Q ss_pred             HcCCccEEEEccccCCcccccccCChHHHHHHHHhhhHHHHHHHHHHhhhhhhc-CCeEEEEcCccccccCCCCccchHH
Q 044010          122 HFGRLDHLVNNAGISSVALFEDIVNITDFKQIMNINFWGSVYTTRFAVPHLRYT-KGKIVVLSSAASWLTAPRMSFYNAS  200 (248)
Q Consensus       122 ~~g~id~vv~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~-~g~iV~isS~~~~~~~~~~~~Y~~s  200 (248)
                      +++++|++|||||.....+..+ .+.++|++.+++|+.+++++++.+.|.|.+. .++||++||..+..+.++...|++|
T Consensus        82 ~~~~~d~vi~~Ag~~~~~~~~~-~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~~~~~~iv~~sS~~~~~~~~~~~~Y~~s  160 (248)
T 2pnf_A           82 LVDGIDILVNNAGITRDKLFLR-MSLLDWEEVLKVNLTGTFLVTQNSLRKMIKQRWGRIVNISSVVGFTGNVGQVNYSTT  160 (248)
T ss_dssp             HSSCCSEEEECCCCCCCCCGGG-CCHHHHHHHHHHHTHHHHHHHHHHCHHHHHHTCEEEEEECCHHHHHCCTTCHHHHHH
T ss_pred             hcCCCCEEEECCCCCCCCcccc-CCHHHHHHHHhhhhHHHHHHHHHHHHHHHhcCCcEEEEEccHHhcCCCCCCchHHHH
Confidence            9999999999999876555544 4779999999999999999999999998754 4899999999888888889999999


Q ss_pred             HHHHHHHHHHHHHHhCC-CeEEEEEecCccccCcccc
Q 044010          201 KAALVLFFETLRVELGS-DVGVTIVTPGFIESELTQG  236 (248)
Q Consensus       201 Kaal~~l~~~la~~~~~-~i~v~~v~pg~v~T~~~~~  236 (248)
                      |++++++++.++.|+++ +|++++|+||+++|++...
T Consensus       161 K~a~~~~~~~la~e~~~~~i~v~~v~Pg~v~t~~~~~  197 (248)
T 2pnf_A          161 KAGLIGFTKSLAKELAPRNVLVNAVAPGFIETDMTAV  197 (248)
T ss_dssp             HHHHHHHHHHHHHHHGGGTEEEEEEEECSBCCGGGGG
T ss_pred             HHHHHHHHHHHHHHhcccCeEEEEEEeceecCchhhh
Confidence            99999999999999976 5999999999999998764

>2bd0_A Sepiapterin reductase; oxidoreductase; HET: NAP BIO; 1.70A {Chlorobium tepidum} SCOP: c.2.1.2

Probab=100.00  E-value=4.3e-36  Score=249.66  Aligned_cols=190  Identities=31%  Similarity=0.442  Sum_probs=171.8

Q ss_pred             CCCEEEEcCCCChHHHHHHHHHHHcCC-------eEEEEeCCcchHHHHHHHHHhhCCCcEEEEEccCCCHHHHHHHHHH
Q 044010           46 SGKVVIITGASSGIGEHLAYEYARRGA-------CLALCARREKSLEEVADTAREIGSPDVITIRADVSKVDDCRSLVEE  118 (248)
Q Consensus        46 ~~k~~lVtGg~~gIG~aia~~l~~~G~-------~V~l~~r~~~~~~~~~~~l~~~~~~~v~~~~~D~~~~~~~~~~~~~  118 (248)
                      ++|++|||||++|||++++++|+++|+       +|++++|+.++.++..+++++.+ .++.++.+|++|.+++++++++
T Consensus         1 ~~k~vlITGasggiG~~la~~l~~~G~~~~~~~~~V~~~~r~~~~~~~~~~~~~~~~-~~~~~~~~D~~~~~~v~~~~~~   79 (244)
T 2bd0_A            1 MKHILLITGAGKGIGRAIALEFARAARHHPDFEPVLVLSSRTAADLEKISLECRAEG-ALTDTITADISDMADVRRLTTH   79 (244)
T ss_dssp             -CEEEEEETTTSHHHHHHHHHHHHHTTTCTTCCEEEEEEESCHHHHHHHHHHHHTTT-CEEEEEECCTTSHHHHHHHHHH
T ss_pred             CCCEEEEECCCChHHHHHHHHHHHhcCcccccceEEEEEeCCHHHHHHHHHHHHccC-CeeeEEEecCCCHHHHHHHHHH
Confidence            378999999999999999999999999       99999999888887777776544 3788999999999999999999


Q ss_pred             HHhHcCCccEEEEccccCCcccccccCChHHHHHHHHhhhHHHHHHHHHHhhhhhhc-CCeEEEEcCccccccCCCCccc
Q 044010          119 TMNHFGRLDHLVNNAGISSVALFEDIVNITDFKQIMNINFWGSVYTTRFAVPHLRYT-KGKIVVLSSAASWLTAPRMSFY  197 (248)
Q Consensus       119 ~~~~~g~id~vv~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~-~g~iV~isS~~~~~~~~~~~~Y  197 (248)
                      +.+++|++|++|||||.....++.+ .+.++|++.+++|+.+++.+++.+.|.|.+. .++||++||..+..+.++...|
T Consensus        80 ~~~~~g~id~li~~Ag~~~~~~~~~-~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~iv~isS~~~~~~~~~~~~Y  158 (244)
T 2bd0_A           80 IVERYGHIDCLVNNAGVGRFGALSD-LTEEDFDYTMNTNLKGTFFLTQALFALMERQHSGHIFFITSVAATKAFRHSSIY  158 (244)
T ss_dssp             HHHHTSCCSEEEECCCCCCCCCGGG-CCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEEECCGGGTSCCTTCHHH
T ss_pred             HHHhCCCCCEEEEcCCcCCcCcccc-CCHHHHHHHHHHhhHHHHHHHHHHHHHHHhCCCCEEEEEecchhcCCCCCCchh
Confidence            9999999999999999876655555 5789999999999999999999999998754 4899999999999998999999


Q ss_pred             hHHHHHHHHHHHHHHHHhCC-CeEEEEEecCccccCccccc
Q 044010          198 NASKAALVLFFETLRVELGS-DVGVTIVTPGFIESELTQGK  237 (248)
Q Consensus       198 ~~sKaal~~l~~~la~~~~~-~i~v~~v~pg~v~T~~~~~~  237 (248)
                      ++||+++++++++++.++++ +|+|++|+||+++|++....
T Consensus       159 ~~sK~a~~~~~~~la~e~~~~gi~v~~v~Pg~v~t~~~~~~  199 (244)
T 2bd0_A          159 CMSKFGQRGLVETMRLYARKCNVRITDVQPGAVYTPMWGKV  199 (244)
T ss_dssp             HHHHHHHHHHHHHHHHHHTTTTEEEEEEEECCBCSTTTCCC
T ss_pred             HHHHHHHHHHHHHHHHHhhccCcEEEEEECCCccchhhhhc
Confidence            99999999999999999987 49999999999999997654

>3guy_A Short-chain dehydrogenase/reductase SDR; structural genomics, oxidoreductase, PSI-2, protein structur initiative; 1.90A {Vibrio parahaemolyticus}

Probab=100.00  E-value=5.7e-37  Score=253.29  Aligned_cols=183  Identities=25%  Similarity=0.316  Sum_probs=156.8

Q ss_pred             CEEEEcCCCChHHHHHHHHHHHcCCeEEEEeCCcchHHHHHHHHHhhCCCcEEEEEccCCCHHHHHHHHHHHHhHcCCcc
Q 044010           48 KVVIITGASSGIGEHLAYEYARRGACLALCARREKSLEEVADTAREIGSPDVITIRADVSKVDDCRSLVEETMNHFGRLD  127 (248)
Q Consensus        48 k~~lVtGg~~gIG~aia~~l~~~G~~V~l~~r~~~~~~~~~~~l~~~~~~~v~~~~~D~~~~~~~~~~~~~~~~~~g~id  127 (248)
                      |++|||||++|||+++|++|+++|++|++++|+.+++++..+++    +.++.++.+|+++.++++++++++.+   ..|
T Consensus         2 k~vlVTGas~gIG~~~a~~l~~~G~~V~~~~r~~~~~~~~~~~~----~~~~~~~~~D~~~~~~v~~~~~~~~~---~~d   74 (230)
T 3guy_A            2 SLIVITGASSGLGAELAKLYDAEGKATYLTGRSESKLSTVTNCL----SNNVGYRARDLASHQEVEQLFEQLDS---IPS   74 (230)
T ss_dssp             -CEEEESTTSHHHHHHHHHHHHTTCCEEEEESCHHHHHHHHHTC----SSCCCEEECCTTCHHHHHHHHHSCSS---CCS
T ss_pred             CEEEEecCCchHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHH----hhccCeEeecCCCHHHHHHHHHHHhh---cCC
Confidence            68999999999999999999999999999999988777665544    34778999999999999999987654   349


Q ss_pred             EEEEccccCCcccccccCChHHHHHHHHhhhHHHHHHHHHHhhhhhhcCCeEEEEcCccccccCCCCccchHHHHHHHHH
Q 044010          128 HLVNNAGISSVALFEDIVNITDFKQIMNINFWGSVYTTRFAVPHLRYTKGKIVVLSSAASWLTAPRMSFYNASKAALVLF  207 (248)
Q Consensus       128 ~vv~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~g~iV~isS~~~~~~~~~~~~Y~~sKaal~~l  207 (248)
                      ++|||||.....++.+ .+.++|++.+++|+.+++.+++.+.|.|.+++++||++||..+..+.++...|++||+|++++
T Consensus        75 ~lv~~Ag~~~~~~~~~-~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~~~~iv~isS~~~~~~~~~~~~Y~asKaa~~~~  153 (230)
T 3guy_A           75 TVVHSAGSGYFGLLQE-QDPEQIQTLIENNLSSAINVLRELVKRYKDQPVNVVMIMSTAAQQPKAQESTYCAVKWAVKGL  153 (230)
T ss_dssp             EEEECCCCCCCSCGGG-SCHHHHHHHHHHHHHHHHHHHHHHHHHHTTSCCEEEEECCGGGTSCCTTCHHHHHHHHHHHHH
T ss_pred             EEEEeCCcCCCCcccc-CCHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCCeEEEEeecccCCCCCCCchhHHHHHHHHHH
Confidence            9999999887666655 578999999999999999999999999987778999999999999999999999999999999


Q ss_pred             HHHHHHHhCCC-eEEEEEecCccccCcccccc
Q 044010          208 FETLRVELGSD-VGVTIVTPGFIESELTQGKF  238 (248)
Q Consensus       208 ~~~la~~~~~~-i~v~~v~pg~v~T~~~~~~~  238 (248)
                      +++++.|+++. ||||+|+||+++|++.+...
T Consensus       154 ~~~la~e~~~~gi~v~~v~PG~v~t~~~~~~~  185 (230)
T 3guy_A          154 IESVRLELKGKPMKIIAVYPGGMATEFWETSG  185 (230)
T ss_dssp             HHHHHHHTTTSSCEEEEEEECCC---------
T ss_pred             HHHHHHHHHhcCeEEEEEECCcccChHHHhcC
Confidence            99999999875 99999999999999987654

>1xq1_A Putative tropinone reducatse; structural genomics, protein structure initiative, CESG, AT1 reductively methylated protein; 2.10A {Arabidopsis thaliana} SCOP: c.2.1.2 PDB: 2q45_A

Probab=100.00  E-value=3.6e-36  Score=253.31  Aligned_cols=193  Identities=29%  Similarity=0.395  Sum_probs=156.9

Q ss_pred             cCCCCCEEEEcCCCChHHHHHHHHHHHcCCeEEEEeCCcchHHHHHHHHHhhCCCcEEEEEccCCCHHHHHHHHHHHHhH
Q 044010           43 EDVSGKVVIITGASSGIGEHLAYEYARRGACLALCARREKSLEEVADTAREIGSPDVITIRADVSKVDDCRSLVEETMNH  122 (248)
Q Consensus        43 ~~~~~k~~lVtGg~~gIG~aia~~l~~~G~~V~l~~r~~~~~~~~~~~l~~~~~~~v~~~~~D~~~~~~~~~~~~~~~~~  122 (248)
                      +++++|++|||||++|||++++++|+++|++|++++|+.++.++..+++++.+. ++.++.+|++|.++++++++++.+.
T Consensus        10 ~~l~~k~vlITGasggiG~~la~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~-~~~~~~~D~~~~~~~~~~~~~~~~~   88 (266)
T 1xq1_A           10 WSLKAKTVLVTGGTKGIGHAIVEEFAGFGAVIHTCARNEYELNECLSKWQKKGF-QVTGSVCDASLRPEREKLMQTVSSM   88 (266)
T ss_dssp             TCCTTCEEEETTTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHTTC-CEEEEECCTTSHHHHHHHHHHHHHH
T ss_pred             CCCCCCEEEEECCCCHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcCC-eeEEEECCCCCHHHHHHHHHHHHHH
Confidence            468999999999999999999999999999999999998888888777776543 7889999999999999999999999


Q ss_pred             c-CCccEEEEccccCCcccccccCChHHHHHHHHhhhHHHHHHHHHHhhhhhhc-CCeEEEEcCccccccCCCCccchHH
Q 044010          123 F-GRLDHLVNNAGISSVALFEDIVNITDFKQIMNINFWGSVYTTRFAVPHLRYT-KGKIVVLSSAASWLTAPRMSFYNAS  200 (248)
Q Consensus       123 ~-g~id~vv~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~-~g~iV~isS~~~~~~~~~~~~Y~~s  200 (248)
                      + +++|++|||||.....++.+ .+.++|++.+++|+.+++++++++.|.|++. .++||++||..+..+.++...|++|
T Consensus        89 ~~~~id~li~~Ag~~~~~~~~~-~~~~~~~~~~~~n~~g~~~l~~~~~~~~~~~~~~~iv~isS~~~~~~~~~~~~Y~~s  167 (266)
T 1xq1_A           89 FGGKLDILINNLGAIRSKPTLD-YTAEDFSFHISTNLESAYHLSQLAHPLLKASGCGNIIFMSSIAGVVSASVGSIYSAT  167 (266)
T ss_dssp             HTTCCSEEEEECCC------CC-CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHSSCEEEEEC----------CCHHHHH
T ss_pred             hCCCCcEEEECCCCCCCCChhh-CCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcCCcEEEEEccchhccCCCCCchHHHH
Confidence            8 89999999999876555554 4779999999999999999999999998754 4899999999998888889999999


Q ss_pred             HHHHHHHHHHHHHHhCC-CeEEEEEecCccccCccccc
Q 044010          201 KAALVLFFETLRVELGS-DVGVTIVTPGFIESELTQGK  237 (248)
Q Consensus       201 Kaal~~l~~~la~~~~~-~i~v~~v~pg~v~T~~~~~~  237 (248)
                      |++++.++++++.++++ +|+|++|+||++.|++.+..
T Consensus       168 K~a~~~~~~~la~e~~~~gi~v~~v~Pg~v~t~~~~~~  205 (266)
T 1xq1_A          168 KGALNQLARNLACEWASDGIRANAVAPAVIATPLAEAV  205 (266)
T ss_dssp             HHHHHHHHHHHHHHHGGGTCEEEEEECCSCC-------
T ss_pred             HHHHHHHHHHHHHHHhHhCcEEEEEeeCCCccchhhhh
Confidence            99999999999999976 59999999999999997654

>2hq1_A Glucose/ribitol dehydrogenase; CTH-1438, structural genomics, southeast collaboratory for structural genomics, secsg, PSI; 1.90A {Clostridium thermocellum}

Probab=100.00  E-value=1.6e-36  Score=252.53  Aligned_cols=192  Identities=29%  Similarity=0.495  Sum_probs=153.9

Q ss_pred             cCCCCCEEEEcCCCChHHHHHHHHHHHcCCeEEEE-eCCcchHHHHHHHHHhhCCCcEEEEEccCCCHHHHHHHHHHHHh
Q 044010           43 EDVSGKVVIITGASSGIGEHLAYEYARRGACLALC-ARREKSLEEVADTAREIGSPDVITIRADVSKVDDCRSLVEETMN  121 (248)
Q Consensus        43 ~~~~~k~~lVtGg~~gIG~aia~~l~~~G~~V~l~-~r~~~~~~~~~~~l~~~~~~~v~~~~~D~~~~~~~~~~~~~~~~  121 (248)
                      |++++|++|||||++|||++++++|+++|++|+++ +|+.+..++..+++++.+ .++.++.+|++|.++++++++++.+
T Consensus         1 M~l~~~~vlItGasggiG~~~a~~l~~~G~~V~~~~~r~~~~~~~~~~~~~~~~-~~~~~~~~D~~~~~~~~~~~~~~~~   79 (247)
T 2hq1_A            1 MQLKGKTAIVTGSSRGLGKAIAWKLGNMGANIVLNGSPASTSLDATAEEFKAAG-INVVVAKGDVKNPEDVENMVKTAMD   79 (247)
T ss_dssp             CTTTTCEEEESSCSSHHHHHHHHHHHHTTCEEEEEECTTCSHHHHHHHHHHHTT-CCEEEEESCTTSHHHHHHHHHHHHH
T ss_pred             CCCCCcEEEEECCCchHHHHHHHHHHHCCCEEEEEcCcCHHHHHHHHHHHHhcC-CcEEEEECCCCCHHHHHHHHHHHHH
Confidence            46889999999999999999999999999999998 677777777777776654 3789999999999999999999999


Q ss_pred             HcCCccEEEEccccCCcccccccCChHHHHHHHHhhhHHHHHHHHHHhhhhhhc-CCeEEEEcCccccccCCCCccchHH
Q 044010          122 HFGRLDHLVNNAGISSVALFEDIVNITDFKQIMNINFWGSVYTTRFAVPHLRYT-KGKIVVLSSAASWLTAPRMSFYNAS  200 (248)
Q Consensus       122 ~~g~id~vv~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~-~g~iV~isS~~~~~~~~~~~~Y~~s  200 (248)
                      +++++|++|||||.....++.+ .+.++|++.+++|+.+++.+++.+.|.|++. .++||++||..+..+.++...|++|
T Consensus        80 ~~~~~d~vi~~Ag~~~~~~~~~-~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~~~~~~iv~~sS~~~~~~~~~~~~Y~~s  158 (247)
T 2hq1_A           80 AFGRIDILVNNAGITRDTLMLK-MSEKDWDDVLNTNLKSAYLCTKAVSKIMLKQKSGKIINITSIAGIIGNAGQANYAAS  158 (247)
T ss_dssp             HHSCCCEEEECC----------------CHHHHHHTHHHHHHHHHHHHHHHHHHTCEEEEEECC---------CHHHHHH
T ss_pred             hcCCCCEEEECCCCCCCCcccc-CCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcCCcEEEEEcChhhccCCCCCcHhHHH
Confidence            9999999999999876554444 4668899999999999999999999998754 4899999999888888889999999


Q ss_pred             HHHHHHHHHHHHHHhCC-CeEEEEEecCccccCcccc
Q 044010          201 KAALVLFFETLRVELGS-DVGVTIVTPGFIESELTQG  236 (248)
Q Consensus       201 Kaal~~l~~~la~~~~~-~i~v~~v~pg~v~T~~~~~  236 (248)
                      |++++.++++++.|+++ +|+||+|+||+++|++...
T Consensus       159 K~a~~~~~~~la~e~~~~gi~v~~v~Pg~v~t~~~~~  195 (247)
T 2hq1_A          159 KAGLIGFTKSIAKEFAAKGIYCNAVAPGIIKTDMTDV  195 (247)
T ss_dssp             HHHHHHHHHHHHHHHGGGTEEEEEEEECSBCCHHHHT
T ss_pred             HHHHHHHHHHHHHHHHHcCcEEEEEEEEEEeccchhh
Confidence            99999999999999987 4999999999999998654

>2nm0_A Probable 3-oxacyl-(acyl-carrier-protein) reductas; oxidoreductase; 1.99A {Streptomyces coelicolor}

Probab=100.00  E-value=4.9e-37  Score=257.63  Aligned_cols=181  Identities=27%  Similarity=0.470  Sum_probs=156.5

Q ss_pred             cCCCCCEEEEcCCCChHHHHHHHHHHHcCCeEEEEeCCcchHHHHHHHHHhhCCCcEEEEEccCCCHHHHHHHHHHHHhH
Q 044010           43 EDVSGKVVIITGASSGIGEHLAYEYARRGACLALCARREKSLEEVADTAREIGSPDVITIRADVSKVDDCRSLVEETMNH  122 (248)
Q Consensus        43 ~~~~~k~~lVtGg~~gIG~aia~~l~~~G~~V~l~~r~~~~~~~~~~~l~~~~~~~v~~~~~D~~~~~~~~~~~~~~~~~  122 (248)
                      .++++|++|||||++|||++++++|+++|++|++++|+.++.+            .+.++.+|++|.++++++++++.++
T Consensus        17 ~~l~~k~vlVTGas~gIG~aia~~l~~~G~~V~~~~r~~~~~~------------~~~~~~~Dl~d~~~v~~~~~~~~~~   84 (253)
T 2nm0_A           17 RSHMSRSVLVTGGNRGIGLAIARAFADAGDKVAITYRSGEPPE------------GFLAVKCDITDTEQVEQAYKEIEET   84 (253)
T ss_dssp             ---CCCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESSSCCCT------------TSEEEECCTTSHHHHHHHHHHHHHH
T ss_pred             cCCCCCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEeCChHhhc------------cceEEEecCCCHHHHHHHHHHHHHH
Confidence            5788999999999999999999999999999999999876432            2678999999999999999999999


Q ss_pred             cCCccEEEEccccCCcccccccCChHHHHHHHHhhhHHHHHHHHHHhhhhhh-cCCeEEEEcCccccccCCCCccchHHH
Q 044010          123 FGRLDHLVNNAGISSVALFEDIVNITDFKQIMNINFWGSVYTTRFAVPHLRY-TKGKIVVLSSAASWLTAPRMSFYNASK  201 (248)
Q Consensus       123 ~g~id~vv~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~-~~g~iV~isS~~~~~~~~~~~~Y~~sK  201 (248)
                      +|++|++|||||.....++.+ .+.++|++.+++|+.+++.+++++.|.|.+ ..|+||++||..+..+.++...|++||
T Consensus        85 ~g~iD~lv~nAg~~~~~~~~~-~~~~~~~~~~~~N~~g~~~l~~~~~~~m~~~~~g~iv~isS~~~~~~~~~~~~Y~asK  163 (253)
T 2nm0_A           85 HGPVEVLIANAGVTKDQLLMR-MSEEDFTSVVETNLTGTFRVVKRANRAMLRAKKGRVVLISSVVGLLGSAGQANYAASK  163 (253)
T ss_dssp             TCSCSEEEEECSCCTTTC----CCTTTTHHHHHHHHHHHHHHHHHHHHHHHHHTCEEEEEECCCCCCCCHHHHHHHHHHH
T ss_pred             cCCCCEEEECCCCCCCCChhh-CCHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCEEEEECchhhCCCCCCcHHHHHHH
Confidence            999999999999876655554 467899999999999999999999999875 458999999999988877888999999


Q ss_pred             HHHHHHHHHHHHHhCCC-eEEEEEecCccccCcccc
Q 044010          202 AALVLFFETLRVELGSD-VGVTIVTPGFIESELTQG  236 (248)
Q Consensus       202 aal~~l~~~la~~~~~~-i~v~~v~pg~v~T~~~~~  236 (248)
                      ++++.++++++.|+++. |+||+|+||+++|++...
T Consensus       164 ~a~~~~~~~la~e~~~~gi~vn~v~PG~v~T~~~~~  199 (253)
T 2nm0_A          164 AGLVGFARSLARELGSRNITFNVVAPGFVDTDMTKV  199 (253)
T ss_dssp             HHHHHHHHHHHHHHCSSSEEEEEEEECSBCC-----
T ss_pred             HHHHHHHHHHHHHhhhcCeEEEEEEeCcCcCcchhh
Confidence            99999999999999874 999999999999999764

>3awd_A GOX2181, putative polyol dehydrogenase; oxidoreductase; 1.80A {Gluconobacter oxydans}

Probab=100.00  E-value=7.7e-36  Score=250.20  Aligned_cols=191  Identities=25%  Similarity=0.349  Sum_probs=172.0

Q ss_pred             cCCCCCEEEEcCCCChHHHHHHHHHHHcCCeEEEEeCCcchHHHHHHHHHhhCCCcEEEEEccCCCHHHHHHHHHHHHhH
Q 044010           43 EDVSGKVVIITGASSGIGEHLAYEYARRGACLALCARREKSLEEVADTAREIGSPDVITIRADVSKVDDCRSLVEETMNH  122 (248)
Q Consensus        43 ~~~~~k~~lVtGg~~gIG~aia~~l~~~G~~V~l~~r~~~~~~~~~~~l~~~~~~~v~~~~~D~~~~~~~~~~~~~~~~~  122 (248)
                      +++++|++|||||++|||++++++|+++|++|++++|+.++.++..+++++.+. ++.++.+|++|.++++++++++.++
T Consensus         9 ~~l~~k~vlItGasggiG~~la~~l~~~G~~V~~~~r~~~~~~~~~~~l~~~~~-~~~~~~~D~~~~~~~~~~~~~~~~~   87 (260)
T 3awd_A            9 LRLDNRVAIVTGGAQNIGLACVTALAEAGARVIIADLDEAMATKAVEDLRMEGH-DVSSVVMDVTNTESVQNAVRSVHEQ   87 (260)
T ss_dssp             GCCTTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHTTC-CEEEEECCTTCHHHHHHHHHHHHHH
T ss_pred             cCCCCCEEEEeCCCchHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcCC-ceEEEEecCCCHHHHHHHHHHHHHH
Confidence            578999999999999999999999999999999999998888777777766553 7899999999999999999999999


Q ss_pred             cCCccEEEEccccCC-cccccccCChHHHHHHHHhhhHHHHHHHHHHhhhhhhc-CCeEEEEcCccccccCCCC--ccch
Q 044010          123 FGRLDHLVNNAGISS-VALFEDIVNITDFKQIMNINFWGSVYTTRFAVPHLRYT-KGKIVVLSSAASWLTAPRM--SFYN  198 (248)
Q Consensus       123 ~g~id~vv~~ag~~~-~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~-~g~iV~isS~~~~~~~~~~--~~Y~  198 (248)
                      ++++|++|||||... ..+..+ .+.++|++.+++|+.+++++++.+.|.|.+. .++||++||..+..+.+..  ..|+
T Consensus        88 ~~~id~vi~~Ag~~~~~~~~~~-~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~~iv~~sS~~~~~~~~~~~~~~Y~  166 (260)
T 3awd_A           88 EGRVDILVACAGICISEVKAED-MTDGQWLKQVDINLNGMFRSCQAVGRIMLEQKQGVIVAIGSMSGLIVNRPQQQAAYN  166 (260)
T ss_dssp             HSCCCEEEECCCCCCCSCCTTT-CCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEEECCGGGTSCCSSSCCHHHH
T ss_pred             cCCCCEEEECCCCCCCCCCccc-CCHHHHHHHHHhccHHHHHHHHHHHHHHhhcCCCEEEEEecchhcccCCCCCccccH
Confidence            999999999999876 444444 5779999999999999999999999998754 5899999999988877766  8999


Q ss_pred             HHHHHHHHHHHHHHHHhCC-CeEEEEEecCccccCccc
Q 044010          199 ASKAALVLFFETLRVELGS-DVGVTIVTPGFIESELTQ  235 (248)
Q Consensus       199 ~sKaal~~l~~~la~~~~~-~i~v~~v~pg~v~T~~~~  235 (248)
                      +||++++.++++++.|+++ +|+|++|+||+++|++.+
T Consensus       167 ~sK~a~~~~~~~l~~e~~~~gi~v~~v~pg~v~t~~~~  204 (260)
T 3awd_A          167 ASKAGVHQYIRSLAAEWAPHGIRANAVAPTYIETTLTR  204 (260)
T ss_dssp             HHHHHHHHHHHHHHHHHGGGTEEEEEEEECCBCCTTTH
T ss_pred             HHHHHHHHHHHHHHHHhhhcCeEEEEEEeeeeccchhh
Confidence            9999999999999999977 599999999999999976

>1yb1_A 17-beta-hydroxysteroid dehydrogenase type XI; short chain dehydrogenase, HUM structural genomics, structural genomics consortium, SGC; HET: AE2; 1.95A {Homo sapiens} SCOP: c.2.1.2

Probab=100.00  E-value=2.4e-36  Score=255.66  Aligned_cols=192  Identities=31%  Similarity=0.461  Sum_probs=172.7

Q ss_pred             cCCCCCEEEEcCCCChHHHHHHHHHHHcCCeEEEEeCCcchHHHHHHHHHhhCCCcEEEEEccCCCHHHHHHHHHHHHhH
Q 044010           43 EDVSGKVVIITGASSGIGEHLAYEYARRGACLALCARREKSLEEVADTAREIGSPDVITIRADVSKVDDCRSLVEETMNH  122 (248)
Q Consensus        43 ~~~~~k~~lVtGg~~gIG~aia~~l~~~G~~V~l~~r~~~~~~~~~~~l~~~~~~~v~~~~~D~~~~~~~~~~~~~~~~~  122 (248)
                      +++++|++|||||++|||++++++|+++|++|++++|+.++.++..+++++.+. ++.++.+|++|.++++++++++.++
T Consensus        27 ~~l~~k~vlITGasggIG~~la~~L~~~G~~V~~~~r~~~~~~~~~~~l~~~~~-~~~~~~~Dl~~~~~v~~~~~~~~~~  105 (272)
T 1yb1_A           27 KSVTGEIVLITGAGHGIGRLTAYEFAKLKSKLVLWDINKHGLEETAAKCKGLGA-KVHTFVVDCSNREDIYSSAKKVKAE  105 (272)
T ss_dssp             CCCTTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHTTC-CEEEEECCTTCHHHHHHHHHHHHHH
T ss_pred             cccCCCEEEEECCCchHHHHHHHHHHHCCCEEEEEEcCHHHHHHHHHHHHhcCC-eEEEEEeeCCCHHHHHHHHHHHHHH
Confidence            578999999999999999999999999999999999999888888877776554 7899999999999999999999999


Q ss_pred             cCCccEEEEccccCCcccccccCChHHHHHHHHhhhHHHHHHHHHHhhhhhhc-CCeEEEEcCccccccCCCCccchHHH
Q 044010          123 FGRLDHLVNNAGISSVALFEDIVNITDFKQIMNINFWGSVYTTRFAVPHLRYT-KGKIVVLSSAASWLTAPRMSFYNASK  201 (248)
Q Consensus       123 ~g~id~vv~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~-~g~iV~isS~~~~~~~~~~~~Y~~sK  201 (248)
                      +|++|++|||||.....+..+ .+.++|++.+++|+.+++.+++.+.|.|.+. .++||++||..+..+.++...|++||
T Consensus       106 ~g~iD~li~~Ag~~~~~~~~~-~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~~~~~iv~isS~~~~~~~~~~~~Y~~sK  184 (272)
T 1yb1_A          106 IGDVSILVNNAGVVYTSDLFA-TQDPQIEKTFEVNVLAHFWTTKAFLPAMTKNNHGHIVTVASAAGHVSVPFLLAYCSSK  184 (272)
T ss_dssp             TCCCSEEEECCCCCCCCCCGG-GHHHHHHHHHHHHTHHHHHHHHHHHHHHHHTTCEEEEEECCCC-CCCHHHHHHHHHHH
T ss_pred             CCCCcEEEECCCcCCCcchhh-CCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcCCCEEEEEechhhcCCCCCchhHHHHH
Confidence            999999999999876655544 4678999999999999999999999998754 48999999999988888888999999


Q ss_pred             HHHHHHHHHHHHHhC----CCeEEEEEecCccccCcccc
Q 044010          202 AALVLFFETLRVELG----SDVGVTIVTPGFIESELTQG  236 (248)
Q Consensus       202 aal~~l~~~la~~~~----~~i~v~~v~pg~v~T~~~~~  236 (248)
                      +++++++++++.|+.    ++|+|++|+||+++|++.+.
T Consensus       185 ~a~~~l~~~la~e~~~~~~~gi~v~~v~Pg~v~t~~~~~  223 (272)
T 1yb1_A          185 FAAVGFHKTLTDELAALQITGVKTTCLCPNFVNTGFIKN  223 (272)
T ss_dssp             HHHHHHHHHHHHHHHHTTCTTEEEEEEEETHHHHCSTTC
T ss_pred             HHHHHHHHHHHHHHHHhCCCCeEEEEEeCCcccCCcccc
Confidence            999999999999994    36999999999999999653

>1zk4_A R-specific alcohol dehydrogenase; short chain reductases/dehydrogenases, magnesium dependence, oxidoreductase; HET: NAP; 1.00A {Lactobacillus brevis} SCOP: c.2.1.2 PDB: 1nxq_A* 1zjy_A* 1zjz_A* 1zk0_A* 1zk1_A* 1zk2_A 1zk3_A

Probab=100.00  E-value=5.2e-36  Score=250.00  Aligned_cols=192  Identities=28%  Similarity=0.480  Sum_probs=172.1

Q ss_pred             cCCCCCEEEEcCCCChHHHHHHHHHHHcCCeEEEEeCCcchHHHHHHHHHhhCCCcEEEEEccCCCHHHHHHHHHHHHhH
Q 044010           43 EDVSGKVVIITGASSGIGEHLAYEYARRGACLALCARREKSLEEVADTAREIGSPDVITIRADVSKVDDCRSLVEETMNH  122 (248)
Q Consensus        43 ~~~~~k~~lVtGg~~gIG~aia~~l~~~G~~V~l~~r~~~~~~~~~~~l~~~~~~~v~~~~~D~~~~~~~~~~~~~~~~~  122 (248)
                      .++++|+++||||++|||++++++|+++|++|++++|+.++.++..+++...  .++.++.+|++|.++++++++++.++
T Consensus         2 ~~~~~k~vlVtGasggiG~~~a~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~--~~~~~~~~D~~~~~~~~~~~~~~~~~   79 (251)
T 1zk4_A            2 NRLDGKVAIITGGTLGIGLAIATKFVEEGAKVMITGRHSDVGEKAAKSVGTP--DQIQFFQHDSSDEDGWTKLFDATEKA   79 (251)
T ss_dssp             CTTTTCEEEETTTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHCCT--TTEEEEECCTTCHHHHHHHHHHHHHH
T ss_pred             CCCCCcEEEEeCCCChHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHhhcc--CceEEEECCCCCHHHHHHHHHHHHHH
Confidence            4688999999999999999999999999999999999987777766666433  37899999999999999999999999


Q ss_pred             cCCccEEEEccccCCcccccccCChHHHHHHHHhhhHHHHHHHHHHhhhhhhcC--CeEEEEcCccccccCCCCccchHH
Q 044010          123 FGRLDHLVNNAGISSVALFEDIVNITDFKQIMNINFWGSVYTTRFAVPHLRYTK--GKIVVLSSAASWLTAPRMSFYNAS  200 (248)
Q Consensus       123 ~g~id~vv~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~--g~iV~isS~~~~~~~~~~~~Y~~s  200 (248)
                      ++++|++|||||.....+..+ .+.++|++.+++|+.+++.+++.++|.|++.+  ++||++||..+..+.++...|++|
T Consensus        80 ~~~id~li~~Ag~~~~~~~~~-~~~~~~~~~~~~N~~~~~~~~~~~~~~~~~~~~~~~iv~isS~~~~~~~~~~~~Y~~s  158 (251)
T 1zk4_A           80 FGPVSTLVNNAGIAVNKSVEE-TTTAEWRKLLAVNLDGVFFGTRLGIQRMKNKGLGASIINMSSIEGFVGDPSLGAYNAS  158 (251)
T ss_dssp             HSSCCEEEECCCCCCCCCTTT-CCHHHHHHHHHHHTHHHHHHHHHHHHHHTTSSSCEEEEEECCGGGTSCCTTCHHHHHH
T ss_pred             hCCCCEEEECCCCCCCCChhh-CCHHHHHHHHHhhhHHHHHHHHHHHHHHHhcCCCCEEEEeCCchhccCCCCCccchHH
Confidence            999999999999876555554 47799999999999999999999999987654  799999999999988899999999


Q ss_pred             HHHHHHHHHHHHHHhC--C-CeEEEEEecCccccCccccc
Q 044010          201 KAALVLFFETLRVELG--S-DVGVTIVTPGFIESELTQGK  237 (248)
Q Consensus       201 Kaal~~l~~~la~~~~--~-~i~v~~v~pg~v~T~~~~~~  237 (248)
                      |++++.++++++.|+.  + +|++++|+||+++|++.+..
T Consensus       159 K~a~~~~~~~~a~e~~~~~~~i~v~~v~Pg~v~t~~~~~~  198 (251)
T 1zk4_A          159 KGAVRIMSKSAALDCALKDYDVRVNTVHPGYIKTPLVDDL  198 (251)
T ss_dssp             HHHHHHHHHHHHHHHHHTTCSEEEEEEEECCBCCHHHHTS
T ss_pred             HHHHHHHHHHHHHHhcccCCCeEEEEEeeCcCcchhhhhc
Confidence            9999999999999986  5 59999999999999987653

>3afn_B Carbonyl reductase; alpha/beta/alpha, rossmann-fold, oxidoreductase; HET: NAP; 1.63A {Sphingomonas SP} PDB: 3afm_A*

Probab=100.00  E-value=5.3e-36  Score=250.59  Aligned_cols=192  Identities=31%  Similarity=0.474  Sum_probs=172.2

Q ss_pred             cCCCCCEEEEcCCCChHHHHHHHHHHHcCCeEEEEeCC-cchHHHHHHHHHhhCCCcEEEEEccCCCHHHHHHHHHHHHh
Q 044010           43 EDVSGKVVIITGASSGIGEHLAYEYARRGACLALCARR-EKSLEEVADTAREIGSPDVITIRADVSKVDDCRSLVEETMN  121 (248)
Q Consensus        43 ~~~~~k~~lVtGg~~gIG~aia~~l~~~G~~V~l~~r~-~~~~~~~~~~l~~~~~~~v~~~~~D~~~~~~~~~~~~~~~~  121 (248)
                      .++++|++|||||++|||++++++|+++|++|++++|+ .++.++..+++++.+ .++.++.+|++|.++++++++++.+
T Consensus         3 ~~l~~k~vlVTGasggiG~~~a~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~-~~~~~~~~D~~~~~~~~~~~~~~~~   81 (258)
T 3afn_B            3 PDLKGKRVLITGSSQGIGLATARLFARAGAKVGLHGRKAPANIDETIASMRADG-GDAAFFAADLATSEACQQLVDEFVA   81 (258)
T ss_dssp             GGGTTCEEEETTCSSHHHHHHHHHHHHTTCEEEEEESSCCTTHHHHHHHHHHTT-CEEEEEECCTTSHHHHHHHHHHHHH
T ss_pred             cCCCCCEEEEeCCCChHHHHHHHHHHHCCCEEEEECCCchhhHHHHHHHHHhcC-CceEEEECCCCCHHHHHHHHHHHHH
Confidence            36889999999999999999999999999999999999 788888877777654 3789999999999999999999999


Q ss_pred             HcCCccEEEEcccc-CCcccccccCChHHHHHHHHhhhHHHHHHHHHHhhhhhhcC------CeEEEEcCccccc-cCCC
Q 044010          122 HFGRLDHLVNNAGI-SSVALFEDIVNITDFKQIMNINFWGSVYTTRFAVPHLRYTK------GKIVVLSSAASWL-TAPR  193 (248)
Q Consensus       122 ~~g~id~vv~~ag~-~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~------g~iV~isS~~~~~-~~~~  193 (248)
                      ++|++|++|||||. ....+..+ .+.++|++.+++|+.+++.+++++.|.|.+.+      ++||++||..+.. +.++
T Consensus        82 ~~g~id~vi~~Ag~~~~~~~~~~-~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~~~~~~~iv~~sS~~~~~~~~~~  160 (258)
T 3afn_B           82 KFGGIDVLINNAGGLVGRKPLPE-IDDTFYDAVMDANIRSVVMTTKFALPHLAAAAKASGQTSAVISTGSIAGHTGGGPG  160 (258)
T ss_dssp             HHSSCSEEEECCCCCCCCCCGGG-CCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHHHHHTSCEEEEEECCTHHHHCCCTT
T ss_pred             HcCCCCEEEECCCCcCCcCcccc-CCHHHHHHHHHhccHHHHHHHHHHHHHHHhcccCCCCCcEEEEecchhhccCCCCC
Confidence            99999999999997 54444444 57799999999999999999999999986443      8999999998887 7788


Q ss_pred             CccchHHHHHHHHHHHHHHHHhCC-CeEEEEEecCccccCcccc
Q 044010          194 MSFYNASKAALVLFFETLRVELGS-DVGVTIVTPGFIESELTQG  236 (248)
Q Consensus       194 ~~~Y~~sKaal~~l~~~la~~~~~-~i~v~~v~pg~v~T~~~~~  236 (248)
                      ...|++||++++.+++.++.++++ +|+|++|+||+++|++...
T Consensus       161 ~~~Y~~sK~a~~~~~~~~~~e~~~~gi~v~~v~Pg~v~t~~~~~  204 (258)
T 3afn_B          161 AGLYGAAKAFLHNVHKNWVDFHTKDGVRFNIVSPGTVDTAFHAD  204 (258)
T ss_dssp             CHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECSBSSGGGTT
T ss_pred             chHHHHHHHHHHHHHHHHHHhhcccCeEEEEEeCCCcccccccc
Confidence            899999999999999999999977 5999999999999998764

>1xu9_A Corticosteroid 11-beta-dehydrogenase, isozyme 1; hydroxysteroid, SDR, oxidoreductase; HET: NDP CPS MES; 1.55A {Homo sapiens} SCOP: c.2.1.2 PDB: 1xu7_A* 3bzu_A* 3czr_A* 3d3e_A* 3d4n_A* 3fco_A* 3frj_A* 3h6k_A* 3hfg_A* 3oq1_A* 3qqp_A* 3pdj_A* 3d5q_A* 2rbe_A* 3byz_A* 3ey4_A* 3tfq_A* 3ch6_A* 2irw_A* 2ilt_A* ...

Probab=100.00  E-value=7.8e-36  Score=254.20  Aligned_cols=193  Identities=33%  Similarity=0.473  Sum_probs=173.5

Q ss_pred             ccCCCCCEEEEcCCCChHHHHHHHHHHHcCCeEEEEeCCcchHHHHHHHHHhhCCCcEEEEEccCCCHHHHHHHHHHHHh
Q 044010           42 SEDVSGKVVIITGASSGIGEHLAYEYARRGACLALCARREKSLEEVADTAREIGSPDVITIRADVSKVDDCRSLVEETMN  121 (248)
Q Consensus        42 ~~~~~~k~~lVtGg~~gIG~aia~~l~~~G~~V~l~~r~~~~~~~~~~~l~~~~~~~v~~~~~D~~~~~~~~~~~~~~~~  121 (248)
                      +.++++|+++||||++|||++++++|+++|++|++++|+.++.++..+++++.+..++.++.+|++|.++++++++++.+
T Consensus        23 ~~~~~~k~vlITGasggIG~~la~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~v~~~~~~~~~  102 (286)
T 1xu9_A           23 PEMLQGKKVIVTGASKGIGREMAYHLAKMGAHVVVTARSKETLQKVVSHCLELGAASAHYIAGTMEDMTFAEQFVAQAGK  102 (286)
T ss_dssp             GGGGTTCEEEESSCSSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHHTCSEEEEEECCTTCHHHHHHHHHHHHH
T ss_pred             hhhcCCCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHHhCCCceEEEeCCCCCHHHHHHHHHHHHH
Confidence            34688999999999999999999999999999999999998888888888776655788999999999999999999999


Q ss_pred             HcCCccEEEEc-cccCCcccccccCChHHHHHHHHhhhHHHHHHHHHHhhhhhhcCCeEEEEcCccccccCCCCccchHH
Q 044010          122 HFGRLDHLVNN-AGISSVALFEDIVNITDFKQIMNINFWGSVYTTRFAVPHLRYTKGKIVVLSSAASWLTAPRMSFYNAS  200 (248)
Q Consensus       122 ~~g~id~vv~~-ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~g~iV~isS~~~~~~~~~~~~Y~~s  200 (248)
                      ++|++|++||| +|.... ...+ .+.+++++.+++|+.+++.+++.+.|.|++.+|+||++||.++..+.++...|++|
T Consensus       103 ~~g~iD~li~naag~~~~-~~~~-~~~~~~~~~~~vN~~g~~~l~~~~~~~~~~~~g~iv~isS~~~~~~~~~~~~Y~as  180 (286)
T 1xu9_A          103 LMGGLDMLILNHITNTSL-NLFH-DDIHHVRKSMEVNFLSYVVLTVAALPMLKQSNGSIVVVSSLAGKVAYPMVAAYSAS  180 (286)
T ss_dssp             HHTSCSEEEECCCCCCCC-CCCC-SCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEEEEGGGTSCCTTCHHHHHH
T ss_pred             HcCCCCEEEECCccCCCC-cccc-CCHHHHHHHHHHHhhHHHHHHHHHHHHHHHCCCEEEEECCcccccCCCCccHHHHH
Confidence            99999999999 565543 3333 47899999999999999999999999987677999999999999998999999999


Q ss_pred             HHHHHHHHHHHHHHh--C-CCeEEEEEecCccccCcccc
Q 044010          201 KAALVLFFETLRVEL--G-SDVGVTIVTPGFIESELTQG  236 (248)
Q Consensus       201 Kaal~~l~~~la~~~--~-~~i~v~~v~pg~v~T~~~~~  236 (248)
                      |+++++++++++.|+  . .+|+|++|+||+++|++...
T Consensus       181 K~a~~~~~~~l~~e~~~~~~~i~v~~v~Pg~v~t~~~~~  219 (286)
T 1xu9_A          181 KFALDGFFSSIRKEYSVSRVNVSITLCVLGLIDTETAMK  219 (286)
T ss_dssp             HHHHHHHHHHHHHHHHHHTCCCEEEEEEECCBCCHHHHH
T ss_pred             HHHHHHHHHHHHHHHhhcCCCeEEEEeecCccCChhHHH
Confidence            999999999999998  3 36999999999999998753

>2h7i_A Enoyl-[acyl-carrier-protein] reductase [NADH]; oxidoreductase, INHA, enoyl acyl carrier reductase, pyrrolid carboxamide; HET: NAD 566; 1.62A {Mycobacterium tuberculosis} SCOP: c.2.1.2 PDB: 1p44_A* 1p45_A* 2b35_A* 2b36_A* 2b37_A* 2aq8_A* 2h7l_A* 2h7m_A* 2h7n_A* 2h7p_A* 2nsd_A* 2pr2_A* 2x22_A* 2x23_A* 3fne_A* 3fnf_A* 3fng_A* 3fnh_A* 3oew_A* 2aqh_A* ...

Probab=100.00  E-value=2.8e-36  Score=254.92  Aligned_cols=187  Identities=21%  Similarity=0.279  Sum_probs=162.7

Q ss_pred             cCCCCCEEEEcCC--CChHHHHHHHHHHHcCCeEEEEeCCcchH-HHHHHHHHhhCCCcEEEEEccCCCHHHHHHHHHHH
Q 044010           43 EDVSGKVVIITGA--SSGIGEHLAYEYARRGACLALCARREKSL-EEVADTAREIGSPDVITIRADVSKVDDCRSLVEET  119 (248)
Q Consensus        43 ~~~~~k~~lVtGg--~~gIG~aia~~l~~~G~~V~l~~r~~~~~-~~~~~~l~~~~~~~v~~~~~D~~~~~~~~~~~~~~  119 (248)
                      .++++|++|||||  ++|||+++|++|+++|++|++++|+.++. ++.    .+..+.++.++.+|++|.++++++++++
T Consensus         3 ~~l~~k~vlVTGa~~s~gIG~aia~~l~~~G~~V~~~~r~~~~~~~~~----~~~~~~~~~~~~~Dv~~~~~v~~~~~~~   78 (269)
T 2h7i_A            3 GLLDGKRILVSGIITDSSIAFHIARVAQEQGAQLVLTGFDRLRLIQRI----TDRLPAKAPLLELDVQNEEHLASLAGRV   78 (269)
T ss_dssp             CTTTTCEEEECCCSSTTSHHHHHHHHHHHTTCEEEEEECSCHHHHHHH----HTTSSSCCCEEECCTTCHHHHHHHHHHH
T ss_pred             cccCCCEEEEECCCCCCchHHHHHHHHHHCCCEEEEEecChHHHHHHH----HHhcCCCceEEEccCCCHHHHHHHHHHH
Confidence            4689999999999  99999999999999999999999987542 333    2222336788999999999999999999


Q ss_pred             HhHcC---CccEEEEccccCCc-----ccccccCChHHHHHHHHhhhHHHHHHHHHHhhhhhhcCCeEEEEcCccccccC
Q 044010          120 MNHFG---RLDHLVNNAGISSV-----ALFEDIVNITDFKQIMNINFWGSVYTTRFAVPHLRYTKGKIVVLSSAASWLTA  191 (248)
Q Consensus       120 ~~~~g---~id~vv~~ag~~~~-----~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~g~iV~isS~~~~~~~  191 (248)
                      .+++|   ++|++|||||...+     .++.+ .+.++|++.+++|+.+++.+++++.|.|.+ +|+||++||..+ .+.
T Consensus        79 ~~~~g~~~~iD~lv~nAg~~~~~~~~~~~~~~-~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~-~g~iv~iss~~~-~~~  155 (269)
T 2h7i_A           79 TEAIGAGNKLDGVVHSIGFMPQTGMGINPFFD-APYADVSKGIHISAYSYASMAKALLPIMNP-GGSIVGMDFDPS-RAM  155 (269)
T ss_dssp             HHHHCTTCCEEEEEECCCCCCGGGSTTSCGGG-CCHHHHHHHHHHHTHHHHHHHHHHGGGEEE-EEEEEEEECCCS-SCC
T ss_pred             HHHhCCCCCceEEEECCccCcccccccccccc-CCHHHHHHHHHHhhHHHHHHHHHHHHhhcc-CCeEEEEcCccc-ccc
Confidence            99999   99999999998752     34444 578999999999999999999999999864 589999999876 667


Q ss_pred             CCCccchHHHHHHHHHHHHHHHHhCC-CeEEEEEecCccccCcccc
Q 044010          192 PRMSFYNASKAALVLFFETLRVELGS-DVGVTIVTPGFIESELTQG  236 (248)
Q Consensus       192 ~~~~~Y~~sKaal~~l~~~la~~~~~-~i~v~~v~pg~v~T~~~~~  236 (248)
                      +.+..|++||+++++++++++.|+++ +||||+|+||+++|+|...
T Consensus       156 ~~~~~Y~asKaa~~~l~~~la~e~~~~gi~vn~v~PG~v~T~~~~~  201 (269)
T 2h7i_A          156 PAYNWMTVAKSALESVNRFVAREAGKYGVRSNLVAAGPIRTLAMSA  201 (269)
T ss_dssp             TTTHHHHHHHHHHHHHHHHHHHHHHTTTCEEEEEEECCCCCHHHHH
T ss_pred             CchHHHHHHHHHHHHHHHHHHHHhcccCcEEEEEecCcccchhhhc
Confidence            78899999999999999999999977 4999999999999998654

>2pd6_A Estradiol 17-beta-dehydrogenase 8; short-chain dehydrogenase/reductase, steroid metabolism, LIP metabolism, structural genomics; HET: NAD; 2.00A {Homo sapiens}

Probab=100.00  E-value=3.1e-36  Score=253.13  Aligned_cols=194  Identities=27%  Similarity=0.411  Sum_probs=168.8

Q ss_pred             ccCCCCCEEEEcCCCChHHHHHHHHHHHcCCeEEEEeCCcchHHHHHHHHHhhC------CCcEEEEEccCCCHHHHHHH
Q 044010           42 SEDVSGKVVIITGASSGIGEHLAYEYARRGACLALCARREKSLEEVADTAREIG------SPDVITIRADVSKVDDCRSL  115 (248)
Q Consensus        42 ~~~~~~k~~lVtGg~~gIG~aia~~l~~~G~~V~l~~r~~~~~~~~~~~l~~~~------~~~v~~~~~D~~~~~~~~~~  115 (248)
                      ..++++|++|||||++|||++++++|+++|++|++++|+.++.++..+++++.+      ..++.++.+|++|.++++++
T Consensus         2 ~~~~~~k~vlITGasggiG~~la~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~   81 (264)
T 2pd6_A            2 QNRLRSALALVTGAGSGIGRAVSVRLAGEGATVAACDLDRAAAQETVRLLGGPGSKEGPPRGNHAAFQADVSEARAARCL   81 (264)
T ss_dssp             CCCCTTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESSHHHHHHHHHTC------------CCEEEECCTTSHHHHHHH
T ss_pred             ccccCCCEEEEECCCChHHHHHHHHHHHCCCEEEEEeCChHHHHHHHHHHHhcCccccccCcceEEEEecCCCHHHHHHH
Confidence            347899999999999999999999999999999999999887777666554433      13678999999999999999


Q ss_pred             HHHHHhHcCCc-cEEEEccccCCcccccccCChHHHHHHHHhhhHHHHHHHHHHhhhhhhc--CCeEEEEcCccccccCC
Q 044010          116 VEETMNHFGRL-DHLVNNAGISSVALFEDIVNITDFKQIMNINFWGSVYTTRFAVPHLRYT--KGKIVVLSSAASWLTAP  192 (248)
Q Consensus       116 ~~~~~~~~g~i-d~vv~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~--~g~iV~isS~~~~~~~~  192 (248)
                      ++++.+++|++ |++|||||.....++.+ .+.++|++.+++|+.+++++++.+.|.|.++  .|+||++||..+..+.+
T Consensus        82 ~~~~~~~~g~i~d~vi~~Ag~~~~~~~~~-~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~~~~g~iv~isS~~~~~~~~  160 (264)
T 2pd6_A           82 LEQVQACFSRPPSVVVSCAGITQDEFLLH-MSEDDWDKVIAVNLKGTFLVTQAAAQALVSNGCRGSIINISSIVGKVGNV  160 (264)
T ss_dssp             HHHHHHHHSSCCSEEEECCCCCCCBCGGG-CCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCCEEEEEECCTHHHHCCT
T ss_pred             HHHHHHHhCCCCeEEEECCCcCCCcchhh-CCHHHHHHHHhhccHHHHHHHHHHHHHHHhcCCCceEEEECChhhccCCC
Confidence            99999999999 99999999876655554 5789999999999999999999999998754  48999999999988888


Q ss_pred             CCccchHHHHHHHHHHHHHHHHhCC-CeEEEEEecCccccCcccc
Q 044010          193 RMSFYNASKAALVLFFETLRVELGS-DVGVTIVTPGFIESELTQG  236 (248)
Q Consensus       193 ~~~~Y~~sKaal~~l~~~la~~~~~-~i~v~~v~pg~v~T~~~~~  236 (248)
                      +...|++||++++.+++.++.++++ +|++++|+||++.|++...
T Consensus       161 ~~~~Y~~sK~a~~~~~~~la~e~~~~gi~v~~v~Pg~v~t~~~~~  205 (264)
T 2pd6_A          161 GQTNYAASKAGVIGLTQTAARELGRHGIRCNSVLPGFIATPMTQK  205 (264)
T ss_dssp             TBHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECSBCSCC---
T ss_pred             CChhhHHHHHHHHHHHHHHHHHhhhcCeEEEEEeeecccccchhh
Confidence            9999999999999999999999977 5999999999999998764

>1uzm_A 3-oxoacyl-[acyl-carrier protein] reductase; beta-ketoacyl reductase, oxidoreductase; 1.49A {Mycobacterium tuberculosis} SCOP: c.2.1.2 PDB: 1uzn_A* 2ntn_A 1uzl_A

Probab=100.00  E-value=1.2e-36  Score=254.20  Aligned_cols=181  Identities=24%  Similarity=0.422  Sum_probs=156.0

Q ss_pred             cCCCCCEEEEcCCCChHHHHHHHHHHHcCCeEEEEeCCcchHHHHHHHHHhhCCCcEEEEEccCCCHHHHHHHHHHHHhH
Q 044010           43 EDVSGKVVIITGASSGIGEHLAYEYARRGACLALCARREKSLEEVADTAREIGSPDVITIRADVSKVDDCRSLVEETMNH  122 (248)
Q Consensus        43 ~~~~~k~~lVtGg~~gIG~aia~~l~~~G~~V~l~~r~~~~~~~~~~~l~~~~~~~v~~~~~D~~~~~~~~~~~~~~~~~  122 (248)
                      .++++|++|||||++|||++++++|+++|++|++++|+.++.++            +..+.+|++|.++++++++++.++
T Consensus        11 ~~l~~k~vlVTGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~------------~~~~~~D~~~~~~~~~~~~~~~~~   78 (247)
T 1uzm_A           11 PPFVSRSVLVTGGNRGIGLAIAQRLAADGHKVAVTHRGSGAPKG------------LFGVEVDVTDSDAVDRAFTAVEEH   78 (247)
T ss_dssp             CCCCCCEEEETTTTSHHHHHHHHHHHHTTCEEEEEESSSCCCTT------------SEEEECCTTCHHHHHHHHHHHHHH
T ss_pred             ccCCCCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEeCChHHHHH------------hcCeeccCCCHHHHHHHHHHHHHH
Confidence            46899999999999999999999999999999999998764332            124889999999999999999999


Q ss_pred             cCCccEEEEccccCCcccccccCChHHHHHHHHhhhHHHHHHHHHHhhhhhhcC-CeEEEEcCccccccCCCCccchHHH
Q 044010          123 FGRLDHLVNNAGISSVALFEDIVNITDFKQIMNINFWGSVYTTRFAVPHLRYTK-GKIVVLSSAASWLTAPRMSFYNASK  201 (248)
Q Consensus       123 ~g~id~vv~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~-g~iV~isS~~~~~~~~~~~~Y~~sK  201 (248)
                      +|++|++|||||.....++.+ .+.++|++.+++|+.+++.+++++.|.|++++ |+||++||..+..+.++...|++||
T Consensus        79 ~g~id~lv~~Ag~~~~~~~~~-~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~~~g~iv~isS~~~~~~~~~~~~Y~~sK  157 (247)
T 1uzm_A           79 QGPVEVLVSNAGLSADAFLMR-MTEEKFEKVINANLTGAFRVAQRASRSMQRNKFGRMIFIGSVSGLWGIGNQANYAASK  157 (247)
T ss_dssp             HSSCSEEEEECSCCC-----C-CCHHHHHHHHHHHTHHHHHHHHHHHHHHHHTTCEEEEEECCCCC-----CCHHHHHHH
T ss_pred             cCCCCEEEECCCCCCCCChhh-CCHHHHHHHHHHHhHHHHHHHHHHHHHHHhCCCCEEEEECCHhhccCCCCChhHHHHH
Confidence            999999999999876555554 57899999999999999999999999997654 8999999999998888999999999


Q ss_pred             HHHHHHHHHHHHHhCC-CeEEEEEecCccccCcccc
Q 044010          202 AALVLFFETLRVELGS-DVGVTIVTPGFIESELTQG  236 (248)
Q Consensus       202 aal~~l~~~la~~~~~-~i~v~~v~pg~v~T~~~~~  236 (248)
                      +++++++++++.|+++ +|+||+|+||+++|++...
T Consensus       158 ~a~~~~~~~la~e~~~~gi~v~~v~PG~v~t~~~~~  193 (247)
T 1uzm_A          158 AGVIGMARSIARELSKANVTANVVAPGYIDTDMTRA  193 (247)
T ss_dssp             HHHHHHHHHHHHHHGGGTEEEEEEEECSBCCHHHHH
T ss_pred             HHHHHHHHHHHHHhhhcCcEEEEEEeCCCcccchhh
Confidence            9999999999999987 5999999999999998654

>2cfc_A 2-(R)-hydroxypropyl-COM dehydrogenase; NAD, oxidoreductase; HET: NAD KPC; 1.8A {Xanthobacter autotrophicus}

Probab=100.00  E-value=7.6e-36  Score=248.85  Aligned_cols=190  Identities=33%  Similarity=0.499  Sum_probs=169.5

Q ss_pred             CCCEEEEcCCCChHHHHHHHHHHHcCCeEEEEeCCcchHHHHHHHHHhhCCCcEEEEEccCCCHHHHHHHHHHHHhHcCC
Q 044010           46 SGKVVIITGASSGIGEHLAYEYARRGACLALCARREKSLEEVADTAREIGSPDVITIRADVSKVDDCRSLVEETMNHFGR  125 (248)
Q Consensus        46 ~~k~~lVtGg~~gIG~aia~~l~~~G~~V~l~~r~~~~~~~~~~~l~~~~~~~v~~~~~D~~~~~~~~~~~~~~~~~~g~  125 (248)
                      ++|+++||||++|||++++++|+++|++|++++|+.++.++..+++.+..+.++.++.+|++|.++++++++++.+++++
T Consensus         1 ~~k~vlItGasggiG~~~a~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~   80 (250)
T 2cfc_A            1 MSRVAIVTGASSGNGLAIATRFLARGDRVAALDLSAETLEETARTHWHAYADKVLRVRADVADEGDVNAAIAATMEQFGA   80 (250)
T ss_dssp             CCCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHSTTTGGGEEEEECCTTCHHHHHHHHHHHHHHHSC
T ss_pred             CCCEEEEeCCCchHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHHhcCCcEEEEEecCCCHHHHHHHHHHHHHHhCC
Confidence            36899999999999999999999999999999999887777776662222347899999999999999999999999999


Q ss_pred             ccEEEEccccCCccc---ccccCChHHHHHHHHhhhHHHHHHHHHHhhhhhhc-CCeEEEEcCccccccCCCCccchHHH
Q 044010          126 LDHLVNNAGISSVAL---FEDIVNITDFKQIMNINFWGSVYTTRFAVPHLRYT-KGKIVVLSSAASWLTAPRMSFYNASK  201 (248)
Q Consensus       126 id~vv~~ag~~~~~~---~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~-~g~iV~isS~~~~~~~~~~~~Y~~sK  201 (248)
                      +|++|||||.....+   +.+ .+.++|++.+++|+.+++.+++.+.|.|.+. .++||++||..+..+.++...|++||
T Consensus        81 id~li~~Ag~~~~~~~~~~~~-~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~~iv~isS~~~~~~~~~~~~Y~~sK  159 (250)
T 2cfc_A           81 IDVLVNNAGITGNSEAGVLHT-TPVEQFDKVMAVNVRGIFLGCRAVLPHMLLQGAGVIVNIASVASLVAFPGRSAYTTSK  159 (250)
T ss_dssp             CCEEEECCCCCCCTTCCSGGG-SCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEEECCGGGTSCCTTCHHHHHHH
T ss_pred             CCEEEECCCCCCCCCcchhhh-CCHHHHHHHHHHhhHHHHHHHHHHHHHHHhCCCCEEEEECChhhccCCCCchhHHHHH
Confidence            999999999875444   444 5779999999999999999999999998754 48999999999998888999999999


Q ss_pred             HHHHHHHHHHHHHhCC-CeEEEEEecCccccCcccc
Q 044010          202 AALVLFFETLRVELGS-DVGVTIVTPGFIESELTQG  236 (248)
Q Consensus       202 aal~~l~~~la~~~~~-~i~v~~v~pg~v~T~~~~~  236 (248)
                      ++++.++++++.|+++ +|+|++|+||+++|++.+.
T Consensus       160 ~a~~~~~~~l~~e~~~~gi~v~~v~Pg~v~t~~~~~  195 (250)
T 2cfc_A          160 GAVLQLTKSVAVDYAGSGIRCNAVCPGMIETPMTQW  195 (250)
T ss_dssp             HHHHHHHHHHHHHHGGGTEEEEEEEECSBCSTTTHH
T ss_pred             HHHHHHHHHHHHHhcccCeEEEEEEeCcCccCcccc
Confidence            9999999999999976 5999999999999999765

>1fmc_A 7 alpha-hydroxysteroid dehydrogenase; short-chain dehydrogenase/reductase, bIle acid catabolism, oxidoreductase; HET: CHO NAD; 1.80A {Escherichia coli} SCOP: c.2.1.2 PDB: 1ahi_A* 1ahh_A*

Probab=100.00  E-value=8.8e-36  Score=249.01  Aligned_cols=192  Identities=26%  Similarity=0.465  Sum_probs=173.7

Q ss_pred             cCCCCCEEEEcCCCChHHHHHHHHHHHcCCeEEEEeCCcchHHHHHHHHHhhCCCcEEEEEccCCCHHHHHHHHHHHHhH
Q 044010           43 EDVSGKVVIITGASSGIGEHLAYEYARRGACLALCARREKSLEEVADTAREIGSPDVITIRADVSKVDDCRSLVEETMNH  122 (248)
Q Consensus        43 ~~~~~k~~lVtGg~~gIG~aia~~l~~~G~~V~l~~r~~~~~~~~~~~l~~~~~~~v~~~~~D~~~~~~~~~~~~~~~~~  122 (248)
                      +++++|++|||||++|||++++++|+++|++|++++|+.++.++..+++++.+. ++.++.+|++|.++++++++++.++
T Consensus         7 ~~~~~~~vlVtGasggiG~~la~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~-~~~~~~~D~~~~~~~~~~~~~~~~~   85 (255)
T 1fmc_A            7 LRLDGKCAIITGAGAGIGKEIAITFATAGASVVVSDINADAANHVVDEIQQLGG-QAFACRCDITSEQELSALADFAISK   85 (255)
T ss_dssp             GCCTTCEEEETTTTSHHHHHHHHHHHTTTCEEEEEESCHHHHHHHHHHHHHTTC-CEEEEECCTTCHHHHHHHHHHHHHH
T ss_pred             CCCCCCEEEEECCccHHHHHHHHHHHHCCCEEEEEcCCHHHHHHHHHHHHHhCC-ceEEEEcCCCCHHHHHHHHHHHHHh
Confidence            468999999999999999999999999999999999998888887777776554 7889999999999999999999999


Q ss_pred             cCCccEEEEccccCCcccccccCChHHHHHHHHhhhHHHHHHHHHHhhhhhhc-CCeEEEEcCccccccCCCCccchHHH
Q 044010          123 FGRLDHLVNNAGISSVALFEDIVNITDFKQIMNINFWGSVYTTRFAVPHLRYT-KGKIVVLSSAASWLTAPRMSFYNASK  201 (248)
Q Consensus       123 ~g~id~vv~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~-~g~iV~isS~~~~~~~~~~~~Y~~sK  201 (248)
                      ++++|++|||||.....+. + .+.++|++.+++|+.+++++++.+.|.|++. .++||++||..+..+.++...|++||
T Consensus        86 ~~~~d~vi~~Ag~~~~~~~-~-~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~~~~~~iv~~sS~~~~~~~~~~~~Y~~sK  163 (255)
T 1fmc_A           86 LGKVDILVNNAGGGGPKPF-D-MPMADFRRAYELNVFSFFHLSQLVAPEMEKNGGGVILTITSMAAENKNINMTSYASSK  163 (255)
T ss_dssp             HSSCCEEEECCCCCCCCCT-T-CCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEEECCGGGTCCCTTCHHHHHHH
T ss_pred             cCCCCEEEECCCCCCCCCC-C-CCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcCCcEEEEEcchhhcCCCCCCcccHHHH
Confidence            9999999999998765544 3 4779999999999999999999999998754 48999999999998888899999999


Q ss_pred             HHHHHHHHHHHHHhCC-CeEEEEEecCccccCccccc
Q 044010          202 AALVLFFETLRVELGS-DVGVTIVTPGFIESELTQGK  237 (248)
Q Consensus       202 aal~~l~~~la~~~~~-~i~v~~v~pg~v~T~~~~~~  237 (248)
                      ++++.+++.++.++++ +|++++|+||++.|++.+..
T Consensus       164 ~a~~~~~~~~~~~~~~~~i~v~~v~Pg~v~t~~~~~~  200 (255)
T 1fmc_A          164 AAASHLVRNMAFDLGEKNIRVNGIAPGAILTDALKSV  200 (255)
T ss_dssp             HHHHHHHHHHHHHHHTTTEEEEEEEECSBCSHHHHTT
T ss_pred             HHHHHHHHHHHHHhhhcCcEEEEEecccCcchhhhhc
Confidence            9999999999999976 59999999999999986643

>1h5q_A NADP-dependent mannitol dehydrogenase; oxidoreductase, mannitol metabolism; HET: NAP; 1.50A {Agaricus bisporus} SCOP: c.2.1.2

Probab=100.00  E-value=7.6e-36  Score=250.75  Aligned_cols=195  Identities=27%  Similarity=0.373  Sum_probs=171.3

Q ss_pred             ccCCCCCEEEEcCCCChHHHHHHHHHHHcCCeEEEEeCCcchHHHHHHHHHhhCCCcEEEEEccCCCHHHHHHHHHHHHh
Q 044010           42 SEDVSGKVVIITGASSGIGEHLAYEYARRGACLALCARREKSLEEVADTAREIGSPDVITIRADVSKVDDCRSLVEETMN  121 (248)
Q Consensus        42 ~~~~~~k~~lVtGg~~gIG~aia~~l~~~G~~V~l~~r~~~~~~~~~~~l~~~~~~~v~~~~~D~~~~~~~~~~~~~~~~  121 (248)
                      .+++++|++|||||++|||++++++|+++|++|++++|+.++.++..+++.+..+.++.++.+|++|.++++++++++.+
T Consensus         9 ~~~~~~k~vlITGasggiG~~~a~~l~~~G~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~   88 (265)
T 1h5q_A            9 TISFVNKTIIVTGGNRGIGLAFTRAVAAAGANVAVIYRSAADAVEVTEKVGKEFGVKTKAYQCDVSNTDIVTKTIQQIDA   88 (265)
T ss_dssp             EECCTTEEEEEETTTSHHHHHHHHHHHHTTEEEEEEESSCTTHHHHHHHHHHHHTCCEEEEECCTTCHHHHHHHHHHHHH
T ss_pred             CcccCCCEEEEECCCchHHHHHHHHHHHCCCeEEEEeCcchhhHHHHHHHHHhcCCeeEEEEeeCCCHHHHHHHHHHHHH
Confidence            35789999999999999999999999999999999999877766666666554344789999999999999999999999


Q ss_pred             HcCCccEEEEccccCCcccccccCChHHHHHHHHhhhHHHHHHHHHHhhhhhhc--CCeEEEEcCccccccCCC------
Q 044010          122 HFGRLDHLVNNAGISSVALFEDIVNITDFKQIMNINFWGSVYTTRFAVPHLRYT--KGKIVVLSSAASWLTAPR------  193 (248)
Q Consensus       122 ~~g~id~vv~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~--~g~iV~isS~~~~~~~~~------  193 (248)
                      +++++|++|||||.....+..+ .+.++|++.+++|+.+++.+++++.|.|.++  +++||++||..+..+.+.      
T Consensus        89 ~~~~id~li~~Ag~~~~~~~~~-~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~~~~~~~iv~~sS~~~~~~~~~~~~~~~  167 (265)
T 1h5q_A           89 DLGPISGLIANAGVSVVKPATE-LTHEDFAFVYDVNVFGVFNTCRAVAKLWLQKQQKGSIVVTSSMSSQIINQSSLNGSL  167 (265)
T ss_dssp             HSCSEEEEEECCCCCCCSCGGG-CCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCCEEEEEECCGGGTSCCEEETTEEC
T ss_pred             hcCCCCEEEECCCcCCCCchhh-CCHHHHHHHHhhhhHhHHHHHHHHHHHHHhcCCCceEEEeCCchhhccccccccccc
Confidence            9999999999999876665555 5789999999999999999999999998654  389999999888765432      


Q ss_pred             -CccchHHHHHHHHHHHHHHHHhCC-CeEEEEEecCccccCccccc
Q 044010          194 -MSFYNASKAALVLFFETLRVELGS-DVGVTIVTPGFIESELTQGK  237 (248)
Q Consensus       194 -~~~Y~~sKaal~~l~~~la~~~~~-~i~v~~v~pg~v~T~~~~~~  237 (248)
                       ...|++||++++.++++++.|+++ +|+|++|+||+++|++....
T Consensus       168 ~~~~Y~~sK~a~~~~~~~la~e~~~~gi~v~~v~Pg~v~t~~~~~~  213 (265)
T 1h5q_A          168 TQVFYNSSKAACSNLVKGLAAEWASAGIRVNALSPGYVNTDQTAHM  213 (265)
T ss_dssp             SCHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECSBCCGGGGGS
T ss_pred             cccccHHHHHHHHHHHHHHHHHHHhcCcEEEEEecCcccccccccc
Confidence             678999999999999999999977 59999999999999997653

>2ehd_A Oxidoreductase, oxidoreductase, short-chain dehydrogenase/reducta; rossman fold, structural genomics, NPPSFA; 2.40A {Thermus thermophilus}

Probab=100.00  E-value=9.6e-36  Score=246.17  Aligned_cols=186  Identities=30%  Similarity=0.402  Sum_probs=158.8

Q ss_pred             CCCCEEEEcCCCChHHHHHHHHHHHcCCeEEEEeCCcchHHHHHHHHHhhCCCcEEEEEccCCCHHHHHHHHHHHHhHcC
Q 044010           45 VSGKVVIITGASSGIGEHLAYEYARRGACLALCARREKSLEEVADTAREIGSPDVITIRADVSKVDDCRSLVEETMNHFG  124 (248)
Q Consensus        45 ~~~k~~lVtGg~~gIG~aia~~l~~~G~~V~l~~r~~~~~~~~~~~l~~~~~~~v~~~~~D~~~~~~~~~~~~~~~~~~g  124 (248)
                      ..+|+++||||++|||++++++|+++|++|++++|+.++.++..+++.     ++.++.+|++|.++++++++++.+.++
T Consensus         3 ~~~k~vlVtGasggiG~~~a~~l~~~G~~V~~~~r~~~~~~~~~~~~~-----~~~~~~~D~~~~~~~~~~~~~~~~~~~   77 (234)
T 2ehd_A            3 GMKGAVLITGASRGIGEATARLLHAKGYRVGLMARDEKRLQALAAELE-----GALPLPGDVREEGDWARAVAAMEEAFG   77 (234)
T ss_dssp             -CCCEEEESSTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHST-----TCEEEECCTTCHHHHHHHHHHHHHHHS
T ss_pred             CCCCEEEEECCCcHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHhh-----hceEEEecCCCHHHHHHHHHHHHHHcC
Confidence            457899999999999999999999999999999999876665544432     578899999999999999999999999


Q ss_pred             CccEEEEccccCCcccccccCChHHHHHHHHhhhHHHHHHHHHHhhhhhhc-CCeEEEEcCccccccCCCCccchHHHHH
Q 044010          125 RLDHLVNNAGISSVALFEDIVNITDFKQIMNINFWGSVYTTRFAVPHLRYT-KGKIVVLSSAASWLTAPRMSFYNASKAA  203 (248)
Q Consensus       125 ~id~vv~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~-~g~iV~isS~~~~~~~~~~~~Y~~sKaa  203 (248)
                      ++|++|||||.....+..+ .+.++|++.+++|+.+++.+++.++|.|++. .++||++||..+..+.++...|++||++
T Consensus        78 ~id~li~~Ag~~~~~~~~~-~~~~~~~~~~~~N~~~~~~~~~~~~~~~~~~~~~~iv~isS~~~~~~~~~~~~Y~~sK~a  156 (234)
T 2ehd_A           78 ELSALVNNAGVGVMKPVHE-LTLEEWRLVLDTNLTGAFLGIRHAVPALLRRGGGTIVNVGSLAGKNPFKGGAAYNASKFG  156 (234)
T ss_dssp             CCCEEEECCCCCCCSCGGG-CCHHHHHHHHHHHTHHHHHHHHHHHHHHHTTTCEEEEEECCTTTTSCCTTCHHHHHHHHH
T ss_pred             CCCEEEECCCcCCCCCccc-CCHHHHHHHHHHHhHHHHHHHHHHHHHHHhCCCcEEEEECCchhcCCCCCCchhhHHHHH
Confidence            9999999999876555555 5789999999999999999999999998755 4899999999999888889999999999


Q ss_pred             HHHHHHHHHHHhCC-CeEEEEEecCccccCcccc
Q 044010          204 LVLFFETLRVELGS-DVGVTIVTPGFIESELTQG  236 (248)
Q Consensus       204 l~~l~~~la~~~~~-~i~v~~v~pg~v~T~~~~~  236 (248)
                      +++++++++.++++ +|++++|+||+++|++...
T Consensus       157 ~~~~~~~la~e~~~~gi~v~~v~Pg~v~t~~~~~  190 (234)
T 2ehd_A          157 LLGLAGAAMLDLREANVRVVNVLPGSVDTGFAGN  190 (234)
T ss_dssp             HHHHHHHHHHHHGGGTEEEEEEECC---------
T ss_pred             HHHHHHHHHHHHhhcCcEEEEEEeCCCcCCcccc
Confidence            99999999999976 5999999999999998764

>3f9i_A 3-oxoacyl-[acyl-carrier-protein] reductase; 3-ketoacyl-(acyl-carrier-protein) reductase, FAT biosynthesis, lipid synthesis, NADP; 2.25A {Rickettsia prowazekii} SCOP: c.2.1.0

Probab=100.00  E-value=2.9e-36  Score=251.69  Aligned_cols=187  Identities=29%  Similarity=0.458  Sum_probs=151.5

Q ss_pred             ccCCCCCEEEEcCCCChHHHHHHHHHHHcCCeEEEEeCCcchHHHHHHHHHhhCCCcEEEEEccCCCHHHHHHHHHHHHh
Q 044010           42 SEDVSGKVVIITGASSGIGEHLAYEYARRGACLALCARREKSLEEVADTAREIGSPDVITIRADVSKVDDCRSLVEETMN  121 (248)
Q Consensus        42 ~~~~~~k~~lVtGg~~gIG~aia~~l~~~G~~V~l~~r~~~~~~~~~~~l~~~~~~~v~~~~~D~~~~~~~~~~~~~~~~  121 (248)
                      +.+.++|++|||||++|||+++|++|+++|++|++++|+.+++++..+++.    .++.++.+|+++.+++++++++   
T Consensus         9 ~~~~~~k~vlVTGas~gIG~~~a~~l~~~G~~V~~~~r~~~~~~~~~~~~~----~~~~~~~~D~~~~~~~~~~~~~---   81 (249)
T 3f9i_A            9 MIDLTGKTSLITGASSGIGSAIARLLHKLGSKVIISGSNEEKLKSLGNALK----DNYTIEVCNLANKEECSNLISK---   81 (249)
T ss_dssp             CCCCTTCEEEETTTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHC----SSEEEEECCTTSHHHHHHHHHT---
T ss_pred             cccCCCCEEEEECCCChHHHHHHHHHHHCCCEEEEEcCCHHHHHHHHHHhc----cCccEEEcCCCCHHHHHHHHHh---
Confidence            457899999999999999999999999999999999999887777666653    3688899999999999888764   


Q ss_pred             HcCCccEEEEccccCCcccccccCChHHHHHHHHhhhHHHHHHHHHHhhhhhhc-CCeEEEEcCccccccCCCCccchHH
Q 044010          122 HFGRLDHLVNNAGISSVALFEDIVNITDFKQIMNINFWGSVYTTRFAVPHLRYT-KGKIVVLSSAASWLTAPRMSFYNAS  200 (248)
Q Consensus       122 ~~g~id~vv~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~-~g~iV~isS~~~~~~~~~~~~Y~~s  200 (248)
                       .+++|++|||||........+ .+.++|++.+++|+.+++.+++.++|.|.++ .|+||++||..+..+.++...|++|
T Consensus        82 -~~~id~li~~Ag~~~~~~~~~-~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~~~~g~iv~isS~~~~~~~~~~~~Y~~s  159 (249)
T 3f9i_A           82 -TSNLDILVCNAGITSDTLAIR-MKDQDFDKVIDINLKANFILNREAIKKMIQKRYGRIINISSIVGIAGNPGQANYCAS  159 (249)
T ss_dssp             -CSCCSEEEECCC--------------CHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEEECCCCC--CCSCSHHHHHH
T ss_pred             -cCCCCEEEECCCCCCCCcccc-CCHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCCcEEEEEccHHhccCCCCCchhHHH
Confidence             478999999999887665554 4668999999999999999999999998654 4899999999999999999999999


Q ss_pred             HHHHHHHHHHHHHHhCC-CeEEEEEecCccccCccccc
Q 044010          201 KAALVLFFETLRVELGS-DVGVTIVTPGFIESELTQGK  237 (248)
Q Consensus       201 Kaal~~l~~~la~~~~~-~i~v~~v~pg~v~T~~~~~~  237 (248)
                      |+|+++++++++.|+++ +|+||+|+||+++|++.+..
T Consensus       160 K~a~~~~~~~la~e~~~~gi~v~~v~PG~v~t~~~~~~  197 (249)
T 3f9i_A          160 KAGLIGMTKSLSYEVATRGITVNAVAPGFIKSDMTDKL  197 (249)
T ss_dssp             HHHHHHHHHHHHHHHGGGTEEEEEEEECCBC------C
T ss_pred             HHHHHHHHHHHHHHHHHcCcEEEEEecCccccCccccc
Confidence            99999999999999987 49999999999999998764

>2c07_A 3-oxoacyl-(acyl-carrier protein) reductase; oxidoreductase, FABG, short-chain alcohol reductase, fatty acid biosynthesis, apicoplast; 1.5A {Plasmodium falciparum} SCOP: c.2.1.2

Probab=100.00  E-value=7.1e-36  Score=254.44  Aligned_cols=192  Identities=28%  Similarity=0.426  Sum_probs=170.3

Q ss_pred             cCCCCCEEEEcCCCChHHHHHHHHHHHcCCeEEEEeCCcchHHHHHHHHHhhCCCcEEEEEccCCCHHHHHHHHHHHHhH
Q 044010           43 EDVSGKVVIITGASSGIGEHLAYEYARRGACLALCARREKSLEEVADTAREIGSPDVITIRADVSKVDDCRSLVEETMNH  122 (248)
Q Consensus        43 ~~~~~k~~lVtGg~~gIG~aia~~l~~~G~~V~l~~r~~~~~~~~~~~l~~~~~~~v~~~~~D~~~~~~~~~~~~~~~~~  122 (248)
                      .++++|++|||||++|||++++++|+++|++|++++|+.++.++..+++++.+. ++.++.+|++|.++++++++++.++
T Consensus        40 ~~l~~k~vlITGasggIG~~la~~L~~~G~~V~~~~r~~~~~~~~~~~l~~~~~-~~~~~~~Dl~d~~~v~~~~~~~~~~  118 (285)
T 2c07_A           40 YCGENKVALVTGAGRGIGREIAKMLAKSVSHVICISRTQKSCDSVVDEIKSFGY-ESSGYAGDVSKKEEISEVINKILTE  118 (285)
T ss_dssp             CCCSSCEEEEESTTSHHHHHHHHHHTTTSSEEEEEESSHHHHHHHHHHHHTTTC-CEEEEECCTTCHHHHHHHHHHHHHH
T ss_pred             ccCCCCEEEEECCCcHHHHHHHHHHHHcCCEEEEEcCCHHHHHHHHHHHHhcCC-ceeEEECCCCCHHHHHHHHHHHHHh
Confidence            467899999999999999999999999999999999998888877777766543 7889999999999999999999999


Q ss_pred             cCCccEEEEccccCCcccccccCChHHHHHHHHhhhHHHHHHHHHHhhhhhhcC-CeEEEEcCccccccCCCCccchHHH
Q 044010          123 FGRLDHLVNNAGISSVALFEDIVNITDFKQIMNINFWGSVYTTRFAVPHLRYTK-GKIVVLSSAASWLTAPRMSFYNASK  201 (248)
Q Consensus       123 ~g~id~vv~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~-g~iV~isS~~~~~~~~~~~~Y~~sK  201 (248)
                      ++++|++|||||.....++.+ .+.++|++.+++|+.+++.+++.+.|.|.+.+ ++||++||..+..+.++...|++||
T Consensus       119 ~~~id~li~~Ag~~~~~~~~~-~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~~~~~iv~isS~~~~~~~~~~~~Y~asK  197 (285)
T 2c07_A          119 HKNVDILVNNAGITRDNLFLR-MKNDEWEDVLRTNLNSLFYITQPISKRMINNRYGRIINISSIVGLTGNVGQANYSSSK  197 (285)
T ss_dssp             CSCCCEEEECCCCCCCCCTTT-CCHHHHHHHHHHHTTHHHHHHHHHHHHHHHHTCEEEEEECCTHHHHCCTTCHHHHHHH
T ss_pred             cCCCCEEEECCCCCCCCchhh-CCHHHHHHHHHHhhHHHHHHHHHHHHHHHhCCCCEEEEECChhhccCCCCCchHHHHH
Confidence            999999999999876655554 47799999999999999999999999987544 8999999999988888999999999


Q ss_pred             HHHHHHHHHHHHHhCC-CeEEEEEecCccccCcccc
Q 044010          202 AALVLFFETLRVELGS-DVGVTIVTPGFIESELTQG  236 (248)
Q Consensus       202 aal~~l~~~la~~~~~-~i~v~~v~pg~v~T~~~~~  236 (248)
                      ++++.++++++.|+++ +|+|++|+||+++|++...
T Consensus       198 ~a~~~~~~~la~e~~~~gi~v~~v~Pg~v~t~~~~~  233 (285)
T 2c07_A          198 AGVIGFTKSLAKELASRNITVNAIAPGFISSDMTDK  233 (285)
T ss_dssp             HHHHHHHHHHHHHHGGGTEEEEEEEECSBCC-----
T ss_pred             HHHHHHHHHHHHHHHHhCcEEEEEEeCcEecCchhh
Confidence            9999999999999976 5999999999999998765

>1xg5_A ARPG836; short chain dehydrogenase, human, SGC, structural genomics, structural genomics consortium, oxidoreductase; HET: NAP; 1.53A {Homo sapiens} SCOP: c.2.1.2

Probab=100.00  E-value=1.8e-35  Score=251.08  Aligned_cols=191  Identities=27%  Similarity=0.431  Sum_probs=171.5

Q ss_pred             CCCCCEEEEcCCCChHHHHHHHHHHHcCCeEEEEeCCcchHHHHHHHHHhhC-CCcEEEEEccCCCHHHHHHHHHHHHhH
Q 044010           44 DVSGKVVIITGASSGIGEHLAYEYARRGACLALCARREKSLEEVADTAREIG-SPDVITIRADVSKVDDCRSLVEETMNH  122 (248)
Q Consensus        44 ~~~~k~~lVtGg~~gIG~aia~~l~~~G~~V~l~~r~~~~~~~~~~~l~~~~-~~~v~~~~~D~~~~~~~~~~~~~~~~~  122 (248)
                      ++++|++|||||++|||++++++|+++|++|++++|+.++.++..+++++.+ ..++.++.+|++|.++++++++++.++
T Consensus        29 ~l~~k~vlVTGasggIG~~la~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~v~~~~~~~~~~  108 (279)
T 1xg5_A           29 RWRDRLALVTGASGGIGAAVARALVQQGLKVVGCARTVGNIEELAAECKSAGYPGTLIPYRCDLSNEEDILSMFSAIRSQ  108 (279)
T ss_dssp             GGTTCEEEEESTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHTTCSSEEEEEECCTTCHHHHHHHHHHHHHH
T ss_pred             ccCCCEEEEECCCchHHHHHHHHHHHCCCEEEEEECChHHHHHHHHHHHhcCCCceEEEEEecCCCHHHHHHHHHHHHHh
Confidence            5789999999999999999999999999999999999988888888777654 246888999999999999999999999


Q ss_pred             cCCccEEEEccccCCcccccccCChHHHHHHHHhhhHHHHHHHHHHhhhhhhcC---CeEEEEcCcccc--ccCCCCccc
Q 044010          123 FGRLDHLVNNAGISSVALFEDIVNITDFKQIMNINFWGSVYTTRFAVPHLRYTK---GKIVVLSSAASW--LTAPRMSFY  197 (248)
Q Consensus       123 ~g~id~vv~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~---g~iV~isS~~~~--~~~~~~~~Y  197 (248)
                      ++++|++|||||.....++.+ .+.++|++.+++|+.+++.+++.+++.|++.+   |+||++||..+.  .+.++...|
T Consensus       109 ~g~iD~vi~~Ag~~~~~~~~~-~~~~~~~~~~~~N~~~~~~~~~~~l~~~~~~~~~~g~iv~isS~~~~~~~~~~~~~~Y  187 (279)
T 1xg5_A          109 HSGVDICINNAGLARPDTLLS-GSTSGWKDMFNVNVLALSICTREAYQSMKERNVDDGHIININSMSGHRVLPLSVTHFY  187 (279)
T ss_dssp             HCCCSEEEECCCCCCCCCTTT-CCHHHHHHHHHHHTHHHHHHHHHHHHHHHHTTCCSCEEEEECCGGGTSCCSCGGGHHH
T ss_pred             CCCCCEEEECCCCCCCCCccc-CCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcCCCCceEEEEcChhhcccCCCCCCchh
Confidence            999999999999876655554 47799999999999999999999999997654   899999999887  566677899


Q ss_pred             hHHHHHHHHHHHHHHHHhC--C-CeEEEEEecCccccCccc
Q 044010          198 NASKAALVLFFETLRVELG--S-DVGVTIVTPGFIESELTQ  235 (248)
Q Consensus       198 ~~sKaal~~l~~~la~~~~--~-~i~v~~v~pg~v~T~~~~  235 (248)
                      ++||++++.+++.++.|++  + +||||+|+||+++|++..
T Consensus       188 ~~sK~a~~~~~~~la~e~~~~~~~i~v~~v~Pg~v~t~~~~  228 (279)
T 1xg5_A          188 SATKYAVTALTEGLRQELREAQTHIRATCISPGVVETQFAF  228 (279)
T ss_dssp             HHHHHHHHHHHHHHHHHHHHTTCCCEEEEEEESCBCSSHHH
T ss_pred             HHHHHHHHHHHHHHHHHHhhcCCCeEEEEEecCcccchhhh
Confidence            9999999999999999996  5 599999999999999854

>1edo_A Beta-keto acyl carrier protein reductase; nucleotide fold, rossmann fold, oxidoreductase; HET: NAP; 2.30A {Brassica napus} SCOP: c.2.1.2 PDB: 2cdh_G

Probab=100.00  E-value=9e-36  Score=247.54  Aligned_cols=189  Identities=31%  Similarity=0.497  Sum_probs=170.1

Q ss_pred             CCEEEEcCCCChHHHHHHHHHHHcCCeEEE-EeCCcchHHHHHHHHHhhCCCcEEEEEccCCCHHHHHHHHHHHHhHcCC
Q 044010           47 GKVVIITGASSGIGEHLAYEYARRGACLAL-CARREKSLEEVADTAREIGSPDVITIRADVSKVDDCRSLVEETMNHFGR  125 (248)
Q Consensus        47 ~k~~lVtGg~~gIG~aia~~l~~~G~~V~l-~~r~~~~~~~~~~~l~~~~~~~v~~~~~D~~~~~~~~~~~~~~~~~~g~  125 (248)
                      ||++|||||++|||++++++|+++|++|++ .+|+.++.++..+++++.+. ++.++.+|++|.++++++++++.+++|+
T Consensus         1 ~k~vlVTGasggiG~~la~~l~~~G~~v~~~~~r~~~~~~~~~~~~~~~~~-~~~~~~~D~~~~~~~~~~~~~~~~~~g~   79 (244)
T 1edo_A            1 SPVVVVTGASRGIGKAIALSLGKAGCKVLVNYARSAKAAEEVSKQIEAYGG-QAITFGGDVSKEADVEAMMKTAIDAWGT   79 (244)
T ss_dssp             CCEEEETTCSSHHHHHHHHHHHHTTCEEEEEESSCHHHHHHHHHHHHHHTC-EEEEEECCTTSHHHHHHHHHHHHHHSSC
T ss_pred             CCEEEEeCCCchHHHHHHHHHHHCCCEEEEEcCCCHHHHHHHHHHHHhcCC-cEEEEeCCCCCHHHHHHHHHHHHHHcCC
Confidence            689999999999999999999999999998 48888877777777776554 7889999999999999999999999999


Q ss_pred             ccEEEEccccCCcccccccCChHHHHHHHHhhhHHHHHHHHHHhhhhhh-cCCeEEEEcCccccccCCCCccchHHHHHH
Q 044010          126 LDHLVNNAGISSVALFEDIVNITDFKQIMNINFWGSVYTTRFAVPHLRY-TKGKIVVLSSAASWLTAPRMSFYNASKAAL  204 (248)
Q Consensus       126 id~vv~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~-~~g~iV~isS~~~~~~~~~~~~Y~~sKaal  204 (248)
                      +|++|||||.....++.+ .+.++|++.+++|+.+++++++.+.|.|.+ ..++||++||..+..+.++...|++||+++
T Consensus        80 id~li~~Ag~~~~~~~~~-~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~iv~~sS~~~~~~~~~~~~Y~~sK~a~  158 (244)
T 1edo_A           80 IDVVVNNAGITRDTLLIR-MKKSQWDEVIDLNLTGVFLCTQAATKIMMKKRKGRIINIASVVGLIGNIGQANYAAAKAGV  158 (244)
T ss_dssp             CSEEEECCCCCCCCCGGG-CCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEEECCTHHHHCCTTCHHHHHHHHHH
T ss_pred             CCEEEECCCCCCCcCccc-CCHHHHHHHHHhhhHHHHHHHHHHHHHHHhcCCCEEEEECChhhcCCCCCCccchhhHHHH
Confidence            999999999877655554 477999999999999999999999999875 458999999999988888899999999999


Q ss_pred             HHHHHHHHHHhCC-CeEEEEEecCccccCccccc
Q 044010          205 VLFFETLRVELGS-DVGVTIVTPGFIESELTQGK  237 (248)
Q Consensus       205 ~~l~~~la~~~~~-~i~v~~v~pg~v~T~~~~~~  237 (248)
                      ++++++++.++++ +|++++|+||+++|++....
T Consensus       159 ~~~~~~la~e~~~~gi~v~~v~Pg~v~t~~~~~~  192 (244)
T 1edo_A          159 IGFSKTAAREGASRNINVNVVCPGFIASDMTAKL  192 (244)
T ss_dssp             HHHHHHHHHHHHTTTEEEEEEEECSBCSHHHHTT
T ss_pred             HHHHHHHHHHhhhcCCEEEEEeeCccccchhhhc
Confidence            9999999999976 59999999999999987653

>3ctm_A Carbonyl reductase; alcohol dehydrogenase, short-chain dehydrogenases/reductases (SDR), X-RAY crystallography, oxidoreductase; 2.69A {Candida parapsilosis}

Probab=100.00  E-value=1.9e-35  Score=250.61  Aligned_cols=191  Identities=24%  Similarity=0.405  Sum_probs=169.4

Q ss_pred             cCCCCCEEEEcCCCChHHHHHHHHHHHcCCeEEEEeCCcchHHHHHHHHHhhCCCcEEEEEccCCCHHHHHHHHHHHHhH
Q 044010           43 EDVSGKVVIITGASSGIGEHLAYEYARRGACLALCARREKSLEEVADTAREIGSPDVITIRADVSKVDDCRSLVEETMNH  122 (248)
Q Consensus        43 ~~~~~k~~lVtGg~~gIG~aia~~l~~~G~~V~l~~r~~~~~~~~~~~l~~~~~~~v~~~~~D~~~~~~~~~~~~~~~~~  122 (248)
                      +++++|++|||||++|||++++++|+++|++|++++|+.++.++..+++++.+. ++.++.+|++|.++++++++++.++
T Consensus        30 ~~l~~k~vlITGasggIG~~la~~L~~~G~~V~~~~r~~~~~~~~~~~~~~~~~-~~~~~~~Dl~~~~~~~~~~~~~~~~  108 (279)
T 3ctm_A           30 FSLKGKVASVTGSSGGIGWAVAEAYAQAGADVAIWYNSHPADEKAEHLQKTYGV-HSKAYKCNISDPKSVEETISQQEKD  108 (279)
T ss_dssp             GCCTTCEEEETTTTSSHHHHHHHHHHHHTCEEEEEESSSCCHHHHHHHHHHHCS-CEEEEECCTTCHHHHHHHHHHHHHH
T ss_pred             cCCCCCEEEEECCCcHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcCC-cceEEEeecCCHHHHHHHHHHHHHH
Confidence            468999999999999999999999999999999999998887777777765543 7889999999999999999999999


Q ss_pred             cCCccEEEEccccCCc-ccccccCChHHHHHHHHhhhHHHHHHHHHHhhhhhhc-CCeEEEEcCcccccc--CCCCccch
Q 044010          123 FGRLDHLVNNAGISSV-ALFEDIVNITDFKQIMNINFWGSVYTTRFAVPHLRYT-KGKIVVLSSAASWLT--APRMSFYN  198 (248)
Q Consensus       123 ~g~id~vv~~ag~~~~-~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~-~g~iV~isS~~~~~~--~~~~~~Y~  198 (248)
                      +|++|++|||||.... .+..+..+.++|++.+++|+.+++.+++.+++.|++. .++||++||..+..+  .++...|+
T Consensus       109 ~g~id~li~~Ag~~~~~~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~~~~~~~~~iv~isS~~~~~~~~~~~~~~Y~  188 (279)
T 3ctm_A          109 FGTIDVFVANAGVTWTQGPEIDVDNYDSWNKIISVDLNGVYYCSHNIGKIFKKNGKGSLIITSSISGKIVNIPQLQAPYN  188 (279)
T ss_dssp             HSCCSEEEECGGGSTTC--CCCSSHHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCCEEEEECCCTTSCC---CCHHHHH
T ss_pred             hCCCCEEEECCcccccCCcccccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcCCCeEEEECchHhccCCCCCCcccHH
Confidence            9999999999998765 4444135678999999999999999999999998754 489999999998877  77788999


Q ss_pred             HHHHHHHHHHHHHHHHhCC-CeEEEEEecCccccCccc
Q 044010          199 ASKAALVLFFETLRVELGS-DVGVTIVTPGFIESELTQ  235 (248)
Q Consensus       199 ~sKaal~~l~~~la~~~~~-~i~v~~v~pg~v~T~~~~  235 (248)
                      +||++++.++++++.|+++ + +||+|+||+++|++.+
T Consensus       189 ~sK~a~~~~~~~la~e~~~~~-~v~~v~Pg~v~t~~~~  225 (279)
T 3ctm_A          189 TAKAACTHLAKSLAIEWAPFA-RVNTISPGYIDTDITD  225 (279)
T ss_dssp             HHHHHHHHHHHHHHHHTTTTC-EEEEEEECSBSSTTTS
T ss_pred             HHHHHHHHHHHHHHHHhcccC-CEEEEeccCCcccccc
Confidence            9999999999999999976 6 9999999999999975

>2ag5_A DHRS6, dehydrogenase/reductase (SDR family) member 6; protein-CO-factor complex, structural genomics, structural G consortium, SGC, oxidoreductase; HET: NAD; 1.84A {Homo sapiens} SCOP: c.2.1.2

Probab=100.00  E-value=4e-36  Score=250.70  Aligned_cols=182  Identities=27%  Similarity=0.383  Sum_probs=159.0

Q ss_pred             CCCCCEEEEcCCCChHHHHHHHHHHHcCCeEEEEeCCcchHHHHHHHHHhhCCCcEEEEEccCCCHHHHHHHHHHHHhHc
Q 044010           44 DVSGKVVIITGASSGIGEHLAYEYARRGACLALCARREKSLEEVADTAREIGSPDVITIRADVSKVDDCRSLVEETMNHF  123 (248)
Q Consensus        44 ~~~~k~~lVtGg~~gIG~aia~~l~~~G~~V~l~~r~~~~~~~~~~~l~~~~~~~v~~~~~D~~~~~~~~~~~~~~~~~~  123 (248)
                      ++++|++|||||++|||++++++|+++|++|++++|+.++.++.. ++     .++.++.+|++|.++++    ++.+++
T Consensus         3 ~l~~k~vlVTGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~-~~-----~~~~~~~~D~~~~~~~~----~~~~~~   72 (246)
T 2ag5_A            3 RLDGKVIILTAAAQGIGQAAALAFAREGAKVIATDINESKLQELE-KY-----PGIQTRVLDVTKKKQID----QFANEV   72 (246)
T ss_dssp             TTTTCEEEESSTTSHHHHHHHHHHHHTTCEEEEEESCHHHHGGGG-GS-----TTEEEEECCTTCHHHHH----HHHHHC
T ss_pred             CCCCCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEECCHHHHHHHH-hc-----cCceEEEeeCCCHHHHH----HHHHHh
Confidence            688999999999999999999999999999999999876544332 11     16888999999999988    444567


Q ss_pred             CCccEEEEccccCCcccccccCChHHHHHHHHhhhHHHHHHHHHHhhhhhhc-CCeEEEEcCccccccCC-CCccchHHH
Q 044010          124 GRLDHLVNNAGISSVALFEDIVNITDFKQIMNINFWGSVYTTRFAVPHLRYT-KGKIVVLSSAASWLTAP-RMSFYNASK  201 (248)
Q Consensus       124 g~id~vv~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~-~g~iV~isS~~~~~~~~-~~~~Y~~sK  201 (248)
                      +++|++|||||.....++.+ .+.++|++.+++|+.+++.+++++.|.|.++ .|+||++||..+..+.+ +...|++||
T Consensus        73 ~~id~lv~~Ag~~~~~~~~~-~~~~~~~~~~~~n~~g~~~~~~~~~~~~~~~~~g~iv~isS~~~~~~~~~~~~~Y~~sK  151 (246)
T 2ag5_A           73 ERLDVLFNVAGFVHHGTVLD-CEEKDWDFSMNLNVRSMYLMIKAFLPKMLAQKSGNIINMSSVASSVKGVVNRCVYSTTK  151 (246)
T ss_dssp             SCCSEEEECCCCCCCBCGGG-CCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEEECCSBTTTBCCTTBHHHHHHH
T ss_pred             CCCCEEEECCccCCCCCccc-CCHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCceEEEEechHhCcCCCCCCccHHHHH
Confidence            89999999999877665555 5789999999999999999999999998754 58999999999888877 888999999


Q ss_pred             HHHHHHHHHHHHHhCC-CeEEEEEecCccccCcccc
Q 044010          202 AALVLFFETLRVELGS-DVGVTIVTPGFIESELTQG  236 (248)
Q Consensus       202 aal~~l~~~la~~~~~-~i~v~~v~pg~v~T~~~~~  236 (248)
                      +++++++++++.|+++ +|+||+|+||+++|++...
T Consensus       152 ~a~~~~~~~la~e~~~~gi~v~~v~Pg~v~t~~~~~  187 (246)
T 2ag5_A          152 AAVIGLTKSVAADFIQQGIRCNCVCPGTVDTPSLQE  187 (246)
T ss_dssp             HHHHHHHHHHHHHHGGGTEEEEEEEESCEECHHHHH
T ss_pred             HHHHHHHHHHHHHhhhcCcEEEEEeeCcCcCcchhh
Confidence            9999999999999987 5999999999999998654

>2ekp_A 2-deoxy-D-gluconate 3-dehydrogenase; structural genomics, NPPSFA, nation project on protein structural and functional analyses; HET: NAD; 1.15A {Thermus thermophilus} PDB: 1x1e_A* 2ekq_A

Probab=100.00  E-value=1.1e-35  Score=247.03  Aligned_cols=179  Identities=22%  Similarity=0.434  Sum_probs=160.6

Q ss_pred             CCEEEEcCCCChHHHHHHHHHHHcCCeEEEEeCCcchHHHHHHHHHhhCCCcEEEEEccCCCHHHHHHHHHHHHhHcCCc
Q 044010           47 GKVVIITGASSGIGEHLAYEYARRGACLALCARREKSLEEVADTAREIGSPDVITIRADVSKVDDCRSLVEETMNHFGRL  126 (248)
Q Consensus        47 ~k~~lVtGg~~gIG~aia~~l~~~G~~V~l~~r~~~~~~~~~~~l~~~~~~~v~~~~~D~~~~~~~~~~~~~~~~~~g~i  126 (248)
                      +|+++||||++|||++++++|+++|++|++++|+.++   ..+++      .+..+.+|++| ++++++++++.++++++
T Consensus         2 ~k~vlVTGas~giG~~~a~~l~~~G~~V~~~~r~~~~---~~~~~------~~~~~~~D~~~-~~~~~~~~~~~~~~g~i   71 (239)
T 2ekp_A            2 ERKALVTGGSRGIGRAIAEALVARGYRVAIASRNPEE---AAQSL------GAVPLPTDLEK-DDPKGLVKRALEALGGL   71 (239)
T ss_dssp             CCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESSCHH---HHHHH------TCEEEECCTTT-SCHHHHHHHHHHHHTSC
T ss_pred             CCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEeCCHHH---HHHhh------CcEEEecCCch-HHHHHHHHHHHHHcCCC
Confidence            6899999999999999999999999999999998765   22333      16788999999 99999999999999999


Q ss_pred             cEEEEccccCCcccccccCChHHHHHHHHhhhHHHHHHHHHHhhhhhhc-CCeEEEEcCccccccC--CCCccchHHHHH
Q 044010          127 DHLVNNAGISSVALFEDIVNITDFKQIMNINFWGSVYTTRFAVPHLRYT-KGKIVVLSSAASWLTA--PRMSFYNASKAA  203 (248)
Q Consensus       127 d~vv~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~-~g~iV~isS~~~~~~~--~~~~~Y~~sKaa  203 (248)
                      |++|||||.....+..+ .+.++|++.+++|+.+++.+++.+.|.|.++ .|+||++||..+..+.  ++...|++||++
T Consensus        72 d~lv~~Ag~~~~~~~~~-~~~~~~~~~~~~N~~~~~~~~~~~~~~~~~~~~g~iv~isS~~~~~~~~~~~~~~Y~~sK~a  150 (239)
T 2ekp_A           72 HVLVHAAAVNVRKPALE-LSYEEWRRVLYLHLDVAFLLAQAAAPHMAEAGWGRVLFIGSVTTFTAGGPVPIPAYTTAKTA  150 (239)
T ss_dssp             CEEEECCCCCCCCCTTT-CCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEEECCGGGTSCCTTSCCHHHHHHHHH
T ss_pred             CEEEECCCCCCCCChhh-CCHHHHHHHHHHHhHHHHHHHHHHHHHHHHcCCcEEEEECchhhccCCCCCCCccHHHHHHH
Confidence            99999999876655555 5789999999999999999999999998754 4899999999998877  788999999999


Q ss_pred             HHHHHHHHHHHhCC-CeEEEEEecCccccCcccc
Q 044010          204 LVLFFETLRVELGS-DVGVTIVTPGFIESELTQG  236 (248)
Q Consensus       204 l~~l~~~la~~~~~-~i~v~~v~pg~v~T~~~~~  236 (248)
                      +++++++++.|+++ +|+||+|+||+++|++...
T Consensus       151 ~~~~~~~la~e~~~~gi~v~~v~Pg~v~t~~~~~  184 (239)
T 2ekp_A          151 LLGLTRALAKEWARLGIRVNLLCPGYVETEFTLP  184 (239)
T ss_dssp             HHHHHHHHHHHHGGGTEEEEEEEECSBCSGGGHH
T ss_pred             HHHHHHHHHHHhhhcCcEEEEEEeCCccCchhhc
Confidence            99999999999987 4999999999999999754

>3s8m_A Enoyl-ACP reductase; rossmann fold, oxidoreductase, NADH binding, fatty acid SYNT enoyl-ACP; 1.60A {Xanthomonas oryzae PV}

Probab=100.00  E-value=3.6e-36  Score=266.16  Aligned_cols=191  Identities=15%  Similarity=0.081  Sum_probs=163.2

Q ss_pred             CCCEEEEcCCCChHHHHHHHHHHH-cCCeEEEEeCCcchHH------------HHHHHHHhhCCCcEEEEEccCCCHHHH
Q 044010           46 SGKVVIITGASSGIGEHLAYEYAR-RGACLALCARREKSLE------------EVADTAREIGSPDVITIRADVSKVDDC  112 (248)
Q Consensus        46 ~~k~~lVtGg~~gIG~aia~~l~~-~G~~V~l~~r~~~~~~------------~~~~~l~~~~~~~v~~~~~D~~~~~~~  112 (248)
                      .+|++|||||++|||+++|+.|++ +|++|++++|+.+..+            ...+++++.+. ++..+.+|++|.+++
T Consensus        60 ~gKvaLVTGASsGIG~AiA~~LA~~~GA~Vv~~~r~~~~~~~~~~~ag~~n~~a~~~~~~~~G~-~a~~i~~Dvtd~~~v  138 (422)
T 3s8m_A           60 GPKKVLVIGASSGYGLASRITAAFGFGADTLGVFFEKPGTASKAGTAGWYNSAAFDKHAKAAGL-YSKSINGDAFSDAAR  138 (422)
T ss_dssp             SCSEEEEESCSSHHHHHHHHHHHHHHCCEEEEEECCCCCCSSSCCCHHHHHHHHHHHHHHHTTC-CEEEEESCTTSHHHH
T ss_pred             CCCEEEEECCChHHHHHHHHHHHHhCCCEEEEEeCCchhhhhhhcccccchhHHHHHHHHhcCC-cEEEEEecCCCHHHH
Confidence            589999999999999999999999 9999999999876533            23355555554 788999999999999


Q ss_pred             HHHHHHHHhHc-CCccEEEEccccC-------------Cccccc--------------------ccCChHHHHHHHHhhh
Q 044010          113 RSLVEETMNHF-GRLDHLVNNAGIS-------------SVALFE--------------------DIVNITDFKQIMNINF  158 (248)
Q Consensus       113 ~~~~~~~~~~~-g~id~vv~~ag~~-------------~~~~~~--------------------~~~~~~~~~~~~~~n~  158 (248)
                      +++++++.+++ |++|++|||||..             ...++.                    ++.+.++|++++++|.
T Consensus       139 ~~~v~~i~~~~~G~IDiLVNNAG~~~r~~p~~G~~~~~~~~p~~~~~~~~~~d~~~~~~~~~~~~~~t~e~~~~~v~Vn~  218 (422)
T 3s8m_A          139 AQVIELIKTEMGGQVDLVVYSLASPVRKLPGSGEVKRSALKPIGQTYTATAIDTNKDTIIQASIEPASAQEIEDTITVMG  218 (422)
T ss_dssp             HHHHHHHHHHSCSCEEEEEECCCCSEEECTTTCCEEECCCCCSSSCEEEEEEETTTTEEEEEEECCCCHHHHHHHHHHHS
T ss_pred             HHHHHHHHHHcCCCCCEEEEcCccccccccccccccccccccccccccccccccccccccccccCCCCHHHHHHHHHhhc
Confidence            99999999999 9999999999973             122221                    2357899999999999


Q ss_pred             HHHH-HHHHHHhh-hhhhcCCeEEEEcCccccccCCCC--ccchHHHHHHHHHHHHHHHHhCCC-eEEEEEecCccccCc
Q 044010          159 WGSV-YTTRFAVP-HLRYTKGKIVVLSSAASWLTAPRM--SFYNASKAALVLFFETLRVELGSD-VGVTIVTPGFIESEL  233 (248)
Q Consensus       159 ~~~~-~l~~~~~~-~~~~~~g~iV~isS~~~~~~~~~~--~~Y~~sKaal~~l~~~la~~~~~~-i~v~~v~pg~v~T~~  233 (248)
                      .+.| .+++++.+ .|.+++|+||++||..+..+.|.+  ++|++||+|+++|+++||.|+++. ||||+|+||+|+|+|
T Consensus       219 ~~~~~~~~~a~~~~~m~~~gG~IVniSSi~g~~~~p~~~~~aY~ASKaAl~~lTrsLA~Ela~~GIRVNaVaPG~i~T~~  298 (422)
T 3s8m_A          219 GQDWELWIDALEGAGVLADGARSVAFSYIGTEITWPIYWHGALGKAKVDLDRTAQRLNARLAKHGGGANVAVLKSVVTQA  298 (422)
T ss_dssp             SHHHHHHHHHHHHTTCEEEEEEEEEEEECCCGGGHHHHTSHHHHHHHHHHHHHHHHHHHHHHTTTCEEEEEEECCCCCTT
T ss_pred             hhHHHHHHHHHHHHHHhhCCCEEEEEeCchhhccCCCccchHHHHHHHHHHHHHHHHHHHhCccCEEEEEEEcCCCcChh
Confidence            9998 78888765 455556899999999998887766  899999999999999999999885 999999999999999


Q ss_pred             cccc
Q 044010          234 TQGK  237 (248)
Q Consensus       234 ~~~~  237 (248)
                      ....
T Consensus       299 ~~~i  302 (422)
T 3s8m_A          299 SAAI  302 (422)
T ss_dssp             GGGS
T ss_pred             hhcC
Confidence            8765

>2wsb_A Galactitol dehydrogenase; oxidoreductase, SDR, rossmann fold, tagatose; HET: NAD; 1.25A {Rhodobacter sphaeroides} PDB: 2wdz_A* 3lqf_A*

Probab=100.00  E-value=2.7e-35  Score=246.07  Aligned_cols=189  Identities=28%  Similarity=0.379  Sum_probs=168.6

Q ss_pred             ccCCCCCEEEEcCCCChHHHHHHHHHHHcCCeEEEEeCCcchHHHHHHHHHhhCCCcE-EEEEccCCCHHHHHHHHHHHH
Q 044010           42 SEDVSGKVVIITGASSGIGEHLAYEYARRGACLALCARREKSLEEVADTAREIGSPDV-ITIRADVSKVDDCRSLVEETM  120 (248)
Q Consensus        42 ~~~~~~k~~lVtGg~~gIG~aia~~l~~~G~~V~l~~r~~~~~~~~~~~l~~~~~~~v-~~~~~D~~~~~~~~~~~~~~~  120 (248)
                      .+++++|+++||||++|||++++++|+++|++|++++|+.++.++..+++   + .++ .++.+|++|.++++++++++.
T Consensus         6 ~~~~~~k~vlITGasggiG~~la~~l~~~G~~V~~~~r~~~~~~~~~~~~---~-~~~~~~~~~D~~~~~~~~~~~~~~~   81 (254)
T 2wsb_A            6 VFRLDGACAAVTGAGSGIGLEICRAFAASGARLILIDREAAALDRAAQEL---G-AAVAARIVADVTDAEAMTAAAAEAE   81 (254)
T ss_dssp             TTCCTTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHH---G-GGEEEEEECCTTCHHHHHHHHHHHH
T ss_pred             ccCCCCCEEEEECCCcHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHh---c-ccceeEEEEecCCHHHHHHHHHHHH
Confidence            35789999999999999999999999999999999999988777666655   2 256 889999999999999999998


Q ss_pred             hHcCCccEEEEccccCCcccccccCChHHHHHHHHhhhHHHHHHHHHHhhhhhhc-CCeEEEEcCccccccCCCC--ccc
Q 044010          121 NHFGRLDHLVNNAGISSVALFEDIVNITDFKQIMNINFWGSVYTTRFAVPHLRYT-KGKIVVLSSAASWLTAPRM--SFY  197 (248)
Q Consensus       121 ~~~g~id~vv~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~-~g~iV~isS~~~~~~~~~~--~~Y  197 (248)
                      + ++++|++|||||.....+..+ .+.++|++.+++|+.+++.+++.+.|.|++. .++||++||..+..+.+..  ..|
T Consensus        82 ~-~~~id~li~~Ag~~~~~~~~~-~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~~~~~~iv~isS~~~~~~~~~~~~~~Y  159 (254)
T 2wsb_A           82 A-VAPVSILVNSAGIARLHDALE-TDDATWRQVMAVNVDGMFWASRAFGRAMVARGAGAIVNLGSMSGTIVNRPQFASSY  159 (254)
T ss_dssp             H-HSCCCEEEECCCCCCCBCSTT-CCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEEECCGGGTSCCSSSCBHHH
T ss_pred             h-hCCCcEEEECCccCCCCCccc-CCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcCCcEEEEEecchhccCCCCCcchHH
Confidence            8 899999999999876655555 4779999999999999999999999998754 4899999999988877777  899


Q ss_pred             hHHHHHHHHHHHHHHHHhCC-CeEEEEEecCccccCcccc
Q 044010          198 NASKAALVLFFETLRVELGS-DVGVTIVTPGFIESELTQG  236 (248)
Q Consensus       198 ~~sKaal~~l~~~la~~~~~-~i~v~~v~pg~v~T~~~~~  236 (248)
                      ++||++++.++++++.++++ +|++++|+||++.|++.+.
T Consensus       160 ~~sK~a~~~~~~~~~~~~~~~gi~v~~v~Pg~v~t~~~~~  199 (254)
T 2wsb_A          160 MASKGAVHQLTRALAAEWAGRGVRVNALAPGYVATEMTLK  199 (254)
T ss_dssp             HHHHHHHHHHHHHHHHHHGGGTEEEEEEEECCBCSHHHHH
T ss_pred             HHHHHHHHHHHHHHHHHHhhcCeEEEEEEecccCchhhhc
Confidence            99999999999999999976 5999999999999998764

>3uce_A Dehydrogenase; rossmann fold, oxidoreductase; HET: NDP; 1.80A {Vibrio vulnificus}

Probab=100.00  E-value=5.3e-36  Score=246.43  Aligned_cols=168  Identities=25%  Similarity=0.377  Sum_probs=151.0

Q ss_pred             cCCCCCEEEEcCCCChHHHHHHHHHHHcCCeEEEEeCCcchHHHHHHHHHhhCCCcEEEEEccCCCHHHHHHHHHHHHhH
Q 044010           43 EDVSGKVVIITGASSGIGEHLAYEYARRGACLALCARREKSLEEVADTAREIGSPDVITIRADVSKVDDCRSLVEETMNH  122 (248)
Q Consensus        43 ~~~~~k~~lVtGg~~gIG~aia~~l~~~G~~V~l~~r~~~~~~~~~~~l~~~~~~~v~~~~~D~~~~~~~~~~~~~~~~~  122 (248)
                      +++++|++|||||++|||+++|++|+++|++|++++|+.+                     +|++|+++++++++++   
T Consensus         2 ~~~~~k~vlVTGas~gIG~~~a~~l~~~G~~V~~~~r~~~---------------------~D~~~~~~v~~~~~~~---   57 (223)
T 3uce_A            2 MGSDKTVYVVLGGTSGIGAELAKQLESEHTIVHVASRQTG---------------------LDISDEKSVYHYFETI---   57 (223)
T ss_dssp             ---CCEEEEEETTTSHHHHHHHHHHCSTTEEEEEESGGGT---------------------CCTTCHHHHHHHHHHH---
T ss_pred             CCCCCCEEEEECCCCHHHHHHHHHHHHCCCEEEEecCCcc---------------------cCCCCHHHHHHHHHHh---
Confidence            4688999999999999999999999999999999999764                     8999999999988754   


Q ss_pred             cCCccEEEEccccCC-cccccccCChHHHHHHHHhhhHHHHHHHHHHhhhhhhcCCeEEEEcCccccccCCCCccchHHH
Q 044010          123 FGRLDHLVNNAGISS-VALFEDIVNITDFKQIMNINFWGSVYTTRFAVPHLRYTKGKIVVLSSAASWLTAPRMSFYNASK  201 (248)
Q Consensus       123 ~g~id~vv~~ag~~~-~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~g~iV~isS~~~~~~~~~~~~Y~~sK  201 (248)
                       |++|++|||||... ..+..+ .+.++|++.+++|+.+++.+++++.|.|++ +|+||++||..+..+.++..+|++||
T Consensus        58 -g~id~lv~nAg~~~~~~~~~~-~~~~~~~~~~~~N~~g~~~~~~~~~~~~~~-~g~iv~~sS~~~~~~~~~~~~Y~asK  134 (223)
T 3uce_A           58 -GAFDHLIVTAGSYAPAGKVVD-VEVTQAKYAFDTKFWGAVLAAKHGARYLKQ-GGSITLTSGMLSRKVVANTYVKAAIN  134 (223)
T ss_dssp             -CSEEEEEECCCCCCCCSCTTT-SCHHHHHHHHHHHHHHHHHHHHHHGGGEEE-EEEEEEECCGGGTSCCTTCHHHHHHH
T ss_pred             -CCCCEEEECCCCCCCCCCccc-CCHHHHHhhheeeeeeHHHHHHHHHhhccC-CeEEEEecchhhccCCCCchHHHHHH
Confidence             89999999999873 444444 578999999999999999999999999964 68999999999999999999999999


Q ss_pred             HHHHHHHHHHHHHhCCCeEEEEEecCccccCcccccc
Q 044010          202 AALVLFFETLRVELGSDVGVTIVTPGFIESELTQGKF  238 (248)
Q Consensus       202 aal~~l~~~la~~~~~~i~v~~v~pg~v~T~~~~~~~  238 (248)
                      +++++++++++.|+++ ||||+|+||+++|++.+...
T Consensus       135 ~a~~~~~~~la~e~~~-i~vn~v~PG~v~t~~~~~~~  170 (223)
T 3uce_A          135 AAIEATTKVLAKELAP-IRVNAISPGLTKTEAYKGMN  170 (223)
T ss_dssp             HHHHHHHHHHHHHHTT-SEEEEEEECSBCSGGGTTSC
T ss_pred             HHHHHHHHHHHHhhcC-cEEEEEEeCCCcchhhhhcc
Confidence            9999999999999988 99999999999999987653

>1dhr_A Dihydropteridine reductase; oxidoreductase(acting on NADH or NADPH); HET: NAD; 2.30A {Rattus norvegicus} SCOP: c.2.1.2 PDB: 1dir_A* 1hdr_A*

Probab=100.00  E-value=3.4e-36  Score=250.39  Aligned_cols=182  Identities=14%  Similarity=0.198  Sum_probs=161.4

Q ss_pred             CCCCCEEEEcCCCChHHHHHHHHHHHcCCeEEEEeCCcchHHHHHHHHHhhCCCcEEEEEccCCCHHHHHHHHHHHHhHc
Q 044010           44 DVSGKVVIITGASSGIGEHLAYEYARRGACLALCARREKSLEEVADTAREIGSPDVITIRADVSKVDDCRSLVEETMNHF  123 (248)
Q Consensus        44 ~~~~k~~lVtGg~~gIG~aia~~l~~~G~~V~l~~r~~~~~~~~~~~l~~~~~~~v~~~~~D~~~~~~~~~~~~~~~~~~  123 (248)
                      ..++|++|||||++|||++++++|+++|++|++++|+.++.+           ....++.+|++|.++++++++++.+++
T Consensus         4 ~~~~k~vlVTGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~-----------~~~~~~~~D~~~~~~v~~~~~~~~~~~   72 (241)
T 1dhr_A            4 SGEARRVLVYGGRGALGSRCVQAFRARNWWVASIDVVENEEA-----------SASVIVKMTDSFTEQADQVTAEVGKLL   72 (241)
T ss_dssp             --CCCEEEEETTTSHHHHHHHHHHHTTTCEEEEEESSCCTTS-----------SEEEECCCCSCHHHHHHHHHHHHHHHH
T ss_pred             cCCCCEEEEECCCcHHHHHHHHHHHhCCCEEEEEeCChhhcc-----------CCcEEEEcCCCCHHHHHHHHHHHHHHh
Confidence            356899999999999999999999999999999999876532           145678999999999999999999999


Q ss_pred             --CCccEEEEccccCCcccccccCChHHHHHHHHhhhHHHHHHHHHHhhhhhhcCCeEEEEcCccccccCCCCccchHHH
Q 044010          124 --GRLDHLVNNAGISSVALFEDIVNITDFKQIMNINFWGSVYTTRFAVPHLRYTKGKIVVLSSAASWLTAPRMSFYNASK  201 (248)
Q Consensus       124 --g~id~vv~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~g~iV~isS~~~~~~~~~~~~Y~~sK  201 (248)
                        |++|++|||||.....++....+.++|++.+++|+.+++.+++++.|.|++ +|+||++||..+..+.++...|++||
T Consensus        73 ~~g~iD~lv~~Ag~~~~~~~~~~~~~~~~~~~~~~N~~~~~~~~~~~~~~~~~-~g~iv~isS~~~~~~~~~~~~Y~asK  151 (241)
T 1dhr_A           73 GDQKVDAILCVAGGWAGGNAKSKSLFKNCDLMWKQSIWTSTISSHLATKHLKE-GGLLTLAGAKAALDGTPGMIGYGMAK  151 (241)
T ss_dssp             TTCCEEEEEECCCCCCCBCTTCTTHHHHHHHHHHHHHHHHHHHHHHHHHHEEE-EEEEEEECCGGGGSCCTTBHHHHHHH
T ss_pred             CCCCCCEEEEcccccCCCCCcccCCHHHHHHHHHHhhHHHHHHHHHHHHhhcc-CCEEEEECCHHHccCCCCchHHHHHH
Confidence              799999999998766555123467999999999999999999999999864 58999999999999989999999999


Q ss_pred             HHHHHHHHHHHHHhC--C-CeEEEEEecCccccCccccc
Q 044010          202 AALVLFFETLRVELG--S-DVGVTIVTPGFIESELTQGK  237 (248)
Q Consensus       202 aal~~l~~~la~~~~--~-~i~v~~v~pg~v~T~~~~~~  237 (248)
                      +++++++++++.|++  + +||||+|+||+++|+|....
T Consensus       152 ~a~~~~~~~la~e~~~~~~gi~v~~v~PG~v~T~~~~~~  190 (241)
T 1dhr_A          152 GAVHQLCQSLAGKNSGMPSGAAAIAVLPVTLDTPMNRKS  190 (241)
T ss_dssp             HHHHHHHHHHTSTTSSCCTTCEEEEEEESCEECHHHHHH
T ss_pred             HHHHHHHHHHHHHhccCCCCeEEEEEecCcccCcccccc
Confidence            999999999999997  6 49999999999999997653

>2et6_A (3R)-hydroxyacyl-COA dehydrogenase; MFE-2, beta-oxidation, peroxisome, SDR, oxido; 2.22A {Candida tropicalis}

Probab=100.00  E-value=6.2e-36  Score=278.60  Aligned_cols=189  Identities=30%  Similarity=0.408  Sum_probs=166.8

Q ss_pred             cCCCCCEEEEcCCCChHHHHHHHHHHHcCCeEEEEeCCc---------chHHHHHHHHHhhCCCcEEEEEccCCCHHHHH
Q 044010           43 EDVSGKVVIITGASSGIGEHLAYEYARRGACLALCARRE---------KSLEEVADTAREIGSPDVITIRADVSKVDDCR  113 (248)
Q Consensus        43 ~~~~~k~~lVtGg~~gIG~aia~~l~~~G~~V~l~~r~~---------~~~~~~~~~l~~~~~~~v~~~~~D~~~~~~~~  113 (248)
                      ++++||+++||||++|||+++|++|+++|++|++.+|+.         +.+++..+++++.++ +.   .+|++|.++++
T Consensus         4 ~~l~gkvalVTGas~GIG~a~A~~la~~Ga~Vv~~~~~~~~~~~gr~~~~~~~~~~~i~~~g~-~~---~~d~~d~~~~~   79 (604)
T 2et6_A            4 VDFKDKVVIITGAGGGLGKYYSLEFAKLGAKVVVNDLGGALNGQGGNSKAADVVVDEIVKNGG-VA---VADYNNVLDGD   79 (604)
T ss_dssp             CCCTTCEEEETTTTSHHHHHHHHHHHHTTCEEEEECC-----------CHHHHHHHHHHHTTC-EE---EEECCCTTCHH
T ss_pred             CCCCCCEEEEeCCCcHHHHHHHHHHHHcCCEEEEEeCCccccccccchHHHHHHHHHHHhcCC-eE---EEEcCCHHHHH
Confidence            468999999999999999999999999999999998765         667777778876553 32   36999998999


Q ss_pred             HHHHHHHhHcCCccEEEEccccCCcccccccCChHHHHHHHHhhhHHHHHHHHHHhhhhhhc-CCeEEEEcCccccccCC
Q 044010          114 SLVEETMNHFGRLDHLVNNAGISSVALFEDIVNITDFKQIMNINFWGSVYTTRFAVPHLRYT-KGKIVVLSSAASWLTAP  192 (248)
Q Consensus       114 ~~~~~~~~~~g~id~vv~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~-~g~iV~isS~~~~~~~~  192 (248)
                      ++++++.+++|++|++|||||+....++.+ .+.++|++.+++|+.|++.++|+++|+|+++ .|+||++||.++..+.+
T Consensus        80 ~~v~~~~~~~G~iDiLVnNAGi~~~~~~~~-~~~~~~~~~~~vNl~g~~~~~~a~~p~m~~~~~G~IVnisS~ag~~~~~  158 (604)
T 2et6_A           80 KIVETAVKNFGTVHVIINNAGILRDASMKK-MTEKDYKLVIDVHLNGAFAVTKAAWPYFQKQKYGRIVNTSSPAGLYGNF  158 (604)
T ss_dssp             HHHHHHHHHHSCCCEEEECCCCCCCBCTTT-CCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEEECCHHHHHCCT
T ss_pred             HHHHHHHHHcCCCCEEEECCCCCCCCChhh-CCHHHHHHHHHHHhHHHHHHHHHHHHHHHHcCCCEEEEECCHHHcCCCC
Confidence            999999999999999999999876666655 5789999999999999999999999999755 49999999999999999


Q ss_pred             CCccchHHHHHHHHHHHHHHHHhCC-CeEEEEEecCccccCccccc
Q 044010          193 RMSFYNASKAALVLFFETLRVELGS-DVGVTIVTPGFIESELTQGK  237 (248)
Q Consensus       193 ~~~~Y~~sKaal~~l~~~la~~~~~-~i~v~~v~pg~v~T~~~~~~  237 (248)
                      +..+|++||+|+.+|+++++.|+++ +||||+|+|| ++|+|+...
T Consensus       159 ~~~~Y~asKaal~~lt~~la~El~~~gIrVn~v~Pg-~~T~m~~~~  203 (604)
T 2et6_A          159 GQANYASAKSALLGFAETLAKEGAKYNIKANAIAPL-ARSRMTESI  203 (604)
T ss_dssp             TBHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEEC-CCCHHHHTT
T ss_pred             CchHHHHHHHHHHHHHHHHHHHhCccCeEEEEEccC-CcCcccccc
Confidence            9999999999999999999999987 4999999998 699986543

>1w6u_A 2,4-dienoyl-COA reductase, mitochondrial precursor; short chain dehydrogenase, beta- oxidation, NADP, oxidoreductase; HET: HXC NAP; 1.75A {Homo sapiens} SCOP: c.2.1.2 PDB: 1w73_A* 1w8d_A*

Probab=100.00  E-value=3.7e-35  Score=251.42  Aligned_cols=193  Identities=20%  Similarity=0.273  Sum_probs=171.2

Q ss_pred             ccCCCCCEEEEcCCCChHHHHHHHHHHHcCCeEEEEeCCcchHHHHHHHHHhhCCCcEEEEEccCCCHHHHHHHHHHHHh
Q 044010           42 SEDVSGKVVIITGASSGIGEHLAYEYARRGACLALCARREKSLEEVADTAREIGSPDVITIRADVSKVDDCRSLVEETMN  121 (248)
Q Consensus        42 ~~~~~~k~~lVtGg~~gIG~aia~~l~~~G~~V~l~~r~~~~~~~~~~~l~~~~~~~v~~~~~D~~~~~~~~~~~~~~~~  121 (248)
                      .++++||++|||||++|||++++++|+++|++|++++|+.++.++..+++++..+.++.++.+|++|.++++++++++.+
T Consensus        21 ~~~l~~k~vlITGasggiG~~la~~L~~~G~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~  100 (302)
T 1w6u_A           21 PNSFQGKVAFITGGGTGLGKGMTTLLSSLGAQCVIASRKMDVLKATAEQISSQTGNKVHAIQCDVRDPDMVQNTVSELIK  100 (302)
T ss_dssp             TTTTTTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHHHSSCEEEEECCTTCHHHHHHHHHHHHH
T ss_pred             cccCCCCEEEEECCCchHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHHhcCCceEEEEeCCCCHHHHHHHHHHHHH
Confidence            35789999999999999999999999999999999999998888888877765334789999999999999999999999


Q ss_pred             HcCCccEEEEccccCCcccccccCChHHHHHHHHhhhHHHHHHHHHHhhhhhh--cCCeEEEEcCccccccCCCCccchH
Q 044010          122 HFGRLDHLVNNAGISSVALFEDIVNITDFKQIMNINFWGSVYTTRFAVPHLRY--TKGKIVVLSSAASWLTAPRMSFYNA  199 (248)
Q Consensus       122 ~~g~id~vv~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~--~~g~iV~isS~~~~~~~~~~~~Y~~  199 (248)
                      ++|++|++|||||.....+..+ .+.++|++.+++|+.+++.+++.+.+.|.+  ..++||++||..+..+.++..+|++
T Consensus       101 ~~g~id~li~~Ag~~~~~~~~~-~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~~~~~~~iv~isS~~~~~~~~~~~~Y~~  179 (302)
T 1w6u_A          101 VAGHPNIVINNAAGNFISPTER-LSPNAWKTITDIVLNGTAFVTLEIGKQLIKAQKGAAFLSITTIYAETGSGFVVPSAS  179 (302)
T ss_dssp             HTCSCSEEEECCCCCCCSCGGG-CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHTTCCEEEEEECCTHHHHCCTTCHHHHH
T ss_pred             HcCCCCEEEECCCCCCCCcccc-CCHHHHHHHHHHHhHHHHHHHHHHHHHHHHhcCCCEEEEEcccccccCCCCcchhHH
Confidence            9999999999999876555544 477999999999999999999999999862  3489999999999888888999999


Q ss_pred             HHHHHHHHHHHHHHHhCC-CeEEEEEecCccccC-ccc
Q 044010          200 SKAALVLFFETLRVELGS-DVGVTIVTPGFIESE-LTQ  235 (248)
Q Consensus       200 sKaal~~l~~~la~~~~~-~i~v~~v~pg~v~T~-~~~  235 (248)
                      ||++++.++++++.++++ +|+|++|+||+++|+ +..
T Consensus       180 sK~a~~~~~~~la~~~~~~gi~v~~v~Pg~v~t~~~~~  217 (302)
T 1w6u_A          180 AKAGVEAMSKSLAAEWGKYGMRFNVIQPGPIKTKGAFS  217 (302)
T ss_dssp             HHHHHHHHHHHHHHHHGGGTEEEEEEEECCBCC-----
T ss_pred             HHHHHHHHHHHHHHHhhhcCcEEEEEeeccCCCcchhh
Confidence            999999999999999976 599999999999997 543

>2et6_A (3R)-hydroxyacyl-COA dehydrogenase; MFE-2, beta-oxidation, peroxisome, SDR, oxido; 2.22A {Candida tropicalis}

Probab=100.00  E-value=1.1e-35  Score=277.03  Aligned_cols=188  Identities=25%  Similarity=0.422  Sum_probs=162.8

Q ss_pred             cCCCCCEEEEcCCCChHHHHHHHHHHHcCCeEEEEeCCcchHHHHHHHHHhhCCCcEEEEEccCCCHHHHHHHHHHHHhH
Q 044010           43 EDVSGKVVIITGASSGIGEHLAYEYARRGACLALCARREKSLEEVADTAREIGSPDVITIRADVSKVDDCRSLVEETMNH  122 (248)
Q Consensus        43 ~~~~~k~~lVtGg~~gIG~aia~~l~~~G~~V~l~~r~~~~~~~~~~~l~~~~~~~v~~~~~D~~~~~~~~~~~~~~~~~  122 (248)
                      .+++||+++||||++|||+++|++|+++|++|++.+|+  ..++..+++++.++ ++..+.+|++  ++.+++++++.++
T Consensus       318 ~~l~gkvalVTGas~GIG~a~A~~la~~Ga~Vv~~~~~--~~~~~~~~i~~~g~-~~~~~~~Dv~--~~~~~~~~~~~~~  392 (604)
T 2et6_A          318 VSLKDKVVLITGAGAGLGKEYAKWFAKYGAKVVVNDFK--DATKTVDEIKAAGG-EAWPDQHDVA--KDSEAIIKNVIDK  392 (604)
T ss_dssp             CCCTTCEEEESSCSSHHHHHHHHHHHHTTCEEEEECSS--CCHHHHHHHHHTTC-EEEEECCCHH--HHHHHHHHHHHHH
T ss_pred             cccCCCeEEEECcchHHHHHHHHHHHHCCCEEEEEeCc--cHHHHHHHHHhcCC-eEEEEEcChH--HHHHHHHHHHHHh
Confidence            46899999999999999999999999999999999874  34566677766554 6777788884  5567889999999


Q ss_pred             cCCccEEEEccccCCcccccccCChHHHHHHHHhhhHHHHHHHHHHhhhhhhc-CCeEEEEcCccccccCCCCccchHHH
Q 044010          123 FGRLDHLVNNAGISSVALFEDIVNITDFKQIMNINFWGSVYTTRFAVPHLRYT-KGKIVVLSSAASWLTAPRMSFYNASK  201 (248)
Q Consensus       123 ~g~id~vv~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~-~g~iV~isS~~~~~~~~~~~~Y~~sK  201 (248)
                      +|++|++|||||+....++.+ .+.++|++.+++|+.|++.++|+++|.|+++ +|+||++||.++..+.+++.+|++||
T Consensus       393 ~G~iDiLVnNAGi~~~~~~~~-~~~~~~~~~~~vNl~g~~~~~~~~~p~m~~~~~G~IVnisS~ag~~~~~~~~~Y~asK  471 (604)
T 2et6_A          393 YGTIDILVNNAGILRDRSFAK-MSKQEWDSVQQVHLIGTFNLSRLAWPYFVEKQFGRIINITSTSGIYGNFGQANYSSSK  471 (604)
T ss_dssp             HSCCCEEEECCCCCCCBCTTT-CCHHHHHHHHHHHTHHHHHHHHHHHHHHHHTTCEEEEEECCHHHHSCCTTBHHHHHHH
T ss_pred             cCCCCEEEECCCCCCCCChhh-CCHHHHHHHHHHHhHHHHHHHHHHHHHHHHcCCCEEEEECChhhccCCCCChhHHHHH
Confidence            999999999999876666655 5789999999999999999999999999755 49999999999999999999999999


Q ss_pred             HHHHHHHHHHHHHhCC-CeEEEEEecCccccCccccc
Q 044010          202 AALVLFFETLRVELGS-DVGVTIVTPGFIESELTQGK  237 (248)
Q Consensus       202 aal~~l~~~la~~~~~-~i~v~~v~pg~v~T~~~~~~  237 (248)
                      +|+.+|+++++.|+++ +||||+|+||. +|+|....
T Consensus       472 aal~~lt~~la~El~~~gIrVn~v~PG~-~T~m~~~~  507 (604)
T 2et6_A          472 AGILGLSKTMAIEGAKNNIKVNIVAPHA-ETAMTLSI  507 (604)
T ss_dssp             HHHHHHHHHHHHHHGGGTEEEEEEEECC-CCCC----
T ss_pred             HHHHHHHHHHHHHhCccCeEEEEEcCCC-CCcccccc
Confidence            9999999999999987 49999999996 99997654

>2bgk_A Rhizome secoisolariciresinol dehydrogenase; oxidoreductase; 1.6A {Podophyllum peltatum} SCOP: c.2.1.2 PDB: 2bgl_A* 2bgm_A*

Probab=100.00  E-value=7.1e-35  Score=246.59  Aligned_cols=193  Identities=29%  Similarity=0.439  Sum_probs=169.9

Q ss_pred             ccCCCCCEEEEcCCCChHHHHHHHHHHHcCCeEEEEeCCcchHHHHHHHHHhhCCCcEEEEEccCCCHHHHHHHHHHHHh
Q 044010           42 SEDVSGKVVIITGASSGIGEHLAYEYARRGACLALCARREKSLEEVADTAREIGSPDVITIRADVSKVDDCRSLVEETMN  121 (248)
Q Consensus        42 ~~~~~~k~~lVtGg~~gIG~aia~~l~~~G~~V~l~~r~~~~~~~~~~~l~~~~~~~v~~~~~D~~~~~~~~~~~~~~~~  121 (248)
                      .+++++|++|||||++|||++++++|+++|++|++++|+.+..++..+++...  .++.++.+|++|.++++++++++.+
T Consensus        11 ~~~l~~k~vlITGasggiG~~~a~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~--~~~~~~~~D~~~~~~~~~~~~~~~~   88 (278)
T 2bgk_A           11 TNRLQDKVAIITGGAGGIGETTAKLFVRYGAKVVIADIADDHGQKVCNNIGSP--DVISFVHCDVTKDEDVRNLVDTTIA   88 (278)
T ss_dssp             CCTTTTCEEEEESTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHCCT--TTEEEEECCTTCHHHHHHHHHHHHH
T ss_pred             cccccCCEEEEECCCCHHHHHHHHHHHHCCCEEEEEcCChhHHHHHHHHhCCC--CceEEEECCCCCHHHHHHHHHHHHH
Confidence            45789999999999999999999999999999999999887766665555322  2688999999999999999999999


Q ss_pred             HcCCccEEEEccccCCc--ccccccCChHHHHHHHHhhhHHHHHHHHHHhhhhhhc-CCeEEEEcCccccccCC-CCccc
Q 044010          122 HFGRLDHLVNNAGISSV--ALFEDIVNITDFKQIMNINFWGSVYTTRFAVPHLRYT-KGKIVVLSSAASWLTAP-RMSFY  197 (248)
Q Consensus       122 ~~g~id~vv~~ag~~~~--~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~-~g~iV~isS~~~~~~~~-~~~~Y  197 (248)
                      +++++|++|||||....  .++.+ .+.++|++.+++|+.+++.+++.+.|.|.++ .|+||++||..+..+.+ +...|
T Consensus        89 ~~~~id~li~~Ag~~~~~~~~~~~-~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~iv~isS~~~~~~~~~~~~~Y  167 (278)
T 2bgk_A           89 KHGKLDIMFGNVGVLSTTPYSILE-AGNEDFKRVMDINVYGAFLVAKHAARVMIPAKKGSIVFTASISSFTAGEGVSHVY  167 (278)
T ss_dssp             HHSCCCEEEECCCCCCSSCSSTTT-CCHHHHHHHHHHHTHHHHHHHHHHHHHHGGGTCEEEEEECCGGGTCCCTTSCHHH
T ss_pred             HcCCCCEEEECCcccCCCCCChhh-CCHHHHHHHHHHhhHHHHHHHHHHHHHHhhcCCCeEEEEeeccccCCCCCCCcch
Confidence            99999999999997643  33333 5779999999999999999999999998754 48999999999988877 78899


Q ss_pred             hHHHHHHHHHHHHHHHHhCC-CeEEEEEecCccccCccccc
Q 044010          198 NASKAALVLFFETLRVELGS-DVGVTIVTPGFIESELTQGK  237 (248)
Q Consensus       198 ~~sKaal~~l~~~la~~~~~-~i~v~~v~pg~v~T~~~~~~  237 (248)
                      ++||+++++++++++.|+++ +|+|++|+||++.|++....
T Consensus       168 ~~sK~a~~~~~~~la~e~~~~gi~v~~v~Pg~v~t~~~~~~  208 (278)
T 2bgk_A          168 TATKHAVLGLTTSLCTELGEYGIRVNCVSPYIVASPLLTDV  208 (278)
T ss_dssp             HHHHHHHHHHHHHHHHHHGGGTEEEEEEEESCCSCCCCTTS
T ss_pred             HHHHHHHHHHHHHHHHHHhhcCcEEEEEEeceecchhhhhh
Confidence            99999999999999999976 59999999999999997654

>1ooe_A Dihydropteridine reductase; structural genomics, PSI, protein structure initiative, southeast collaboratory for structural genomics; HET: MES; 1.65A {Caenorhabditis elegans} SCOP: c.2.1.2

Probab=100.00  E-value=5e-36  Score=248.56  Aligned_cols=181  Identities=17%  Similarity=0.237  Sum_probs=161.2

Q ss_pred             CCCCEEEEcCCCChHHHHHHHHHHHcCCeEEEEeCCcchHHHHHHHHHhhCCCcEEEEEccCCCHHHHHHHHHHHHhHc-
Q 044010           45 VSGKVVIITGASSGIGEHLAYEYARRGACLALCARREKSLEEVADTAREIGSPDVITIRADVSKVDDCRSLVEETMNHF-  123 (248)
Q Consensus        45 ~~~k~~lVtGg~~gIG~aia~~l~~~G~~V~l~~r~~~~~~~~~~~l~~~~~~~v~~~~~D~~~~~~~~~~~~~~~~~~-  123 (248)
                      |++|++|||||++|||++++++|+++|++|++++|+.++.+           ....++.+|++|.++++++++++.+++ 
T Consensus         1 m~~k~vlITGas~gIG~~~a~~l~~~G~~V~~~~r~~~~~~-----------~~~~~~~~D~~~~~~~~~~~~~~~~~~~   69 (236)
T 1ooe_A            1 MSSGKVIVYGGKGALGSAILEFFKKNGYTVLNIDLSANDQA-----------DSNILVDGNKNWTEQEQSILEQTASSLQ   69 (236)
T ss_dssp             -CCEEEEEETTTSHHHHHHHHHHHHTTEEEEEEESSCCTTS-----------SEEEECCTTSCHHHHHHHHHHHHHHHHT
T ss_pred             CCCCEEEEECCCcHHHHHHHHHHHHCCCEEEEEecCccccc-----------cccEEEeCCCCCHHHHHHHHHHHHHHhC
Confidence            47899999999999999999999999999999999876532           145678899999999999999999999 


Q ss_pred             -CCccEEEEccccCCcccccccCChHHHHHHHHhhhHHHHHHHHHHhhhhhhcCCeEEEEcCccccccCCCCccchHHHH
Q 044010          124 -GRLDHLVNNAGISSVALFEDIVNITDFKQIMNINFWGSVYTTRFAVPHLRYTKGKIVVLSSAASWLTAPRMSFYNASKA  202 (248)
Q Consensus       124 -g~id~vv~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~g~iV~isS~~~~~~~~~~~~Y~~sKa  202 (248)
                       |++|++|||||.....++....+.++|++.+++|+.+++.+++.+.|.|++ +|+||++||..+..+.++...|++||+
T Consensus        70 ~g~id~lv~~Ag~~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~-~g~iv~isS~~~~~~~~~~~~Y~~sK~  148 (236)
T 1ooe_A           70 GSQVDGVFCVAGGWAGGSASSKDFVKNADLMIKQSVWSSAIAAKLATTHLKP-GGLLQLTGAAAAMGPTPSMIGYGMAKA  148 (236)
T ss_dssp             TCCEEEEEECCCCCCCBCTTSTTHHHHHHHHHHHHHHHHHHHHHHHHHHEEE-EEEEEEECCGGGGSCCTTBHHHHHHHH
T ss_pred             CCCCCEEEECCcccCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHhcc-CCEEEEECchhhccCCCCcHHHHHHHH
Confidence             799999999998765555122467899999999999999999999999864 589999999999999899999999999


Q ss_pred             HHHHHHHHHHHHhC--CC-eEEEEEecCccccCccccc
Q 044010          203 ALVLFFETLRVELG--SD-VGVTIVTPGFIESELTQGK  237 (248)
Q Consensus       203 al~~l~~~la~~~~--~~-i~v~~v~pg~v~T~~~~~~  237 (248)
                      ++++++++++.|++  +. |+||+|+||+++|+|.+..
T Consensus       149 a~~~~~~~la~e~~~~~~gi~v~~v~Pg~v~t~~~~~~  186 (236)
T 1ooe_A          149 AVHHLTSSLAAKDSGLPDNSAVLTIMPVTLDTPMNRKW  186 (236)
T ss_dssp             HHHHHHHHHHSTTSSCCTTCEEEEEEESCBCCHHHHHH
T ss_pred             HHHHHHHHHHHHhcccCCCeEEEEEecCcccCcchhhc
Confidence            99999999999997  64 9999999999999997653

>3zu3_A Putative reductase YPO4104/Y4119/YP_4011; oxidoreductase, fatty acid biosynthesis II, short-chain dehydrogenase reductase superfamily; HET: NAI; 1.80A {Yersinia pestis} PDB: 3zu4_A* 3zu5_A* 3zu2_A*

Probab=100.00  E-value=2.6e-35  Score=258.62  Aligned_cols=194  Identities=12%  Similarity=0.033  Sum_probs=164.9

Q ss_pred             CCCCCEEEEcCCCChHHHHHHHHHHH-cCCeEEEEeCCcchHH------------HHHHHHHhhCCCcEEEEEccCCCHH
Q 044010           44 DVSGKVVIITGASSGIGEHLAYEYAR-RGACLALCARREKSLE------------EVADTAREIGSPDVITIRADVSKVD  110 (248)
Q Consensus        44 ~~~~k~~lVtGg~~gIG~aia~~l~~-~G~~V~l~~r~~~~~~------------~~~~~l~~~~~~~v~~~~~D~~~~~  110 (248)
                      .-.+|++|||||++|||+++|+.|++ +|++|++++|+.+..+            ...+.+++.+ .++..+.+|++|.+
T Consensus        44 ~~~gKvaLVTGas~GIG~AiA~~LA~g~GA~Vv~~~~~~~~~~~~~~~~gwyn~~~~~~~~~~~G-~~a~~i~~Dvtd~~  122 (405)
T 3zu3_A           44 ANGPKRVLVIGASTGYGLAARITAAFGCGADTLGVFFERPGEEGKPGTSGWYNSAAFHKFAAQKG-LYAKSINGDAFSDE  122 (405)
T ss_dssp             TTCCSEEEEESCSSHHHHHHHHHHHHHHCCEEEEEECCCCCBTTBCCCHHHHHHHHHHHHHHHTT-CCEEEEESCTTSHH
T ss_pred             CCCCCEEEEeCcchHHHHHHHHHHHHhcCCEEEEEeCCchhhhhhcccccchhHHHHHHHHHhcC-CceEEEECCCCCHH
Confidence            35789999999999999999999999 9999999998765432            2333455544 37889999999999


Q ss_pred             HHHHHHHHHHhHcCCccEEEEccccCC-------------cccc--------------------cccCChHHHHHHHHhh
Q 044010          111 DCRSLVEETMNHFGRLDHLVNNAGISS-------------VALF--------------------EDIVNITDFKQIMNIN  157 (248)
Q Consensus       111 ~~~~~~~~~~~~~g~id~vv~~ag~~~-------------~~~~--------------------~~~~~~~~~~~~~~~n  157 (248)
                      +++++++++.+++|++|++|||||...             .+++                    .++.+.++|++++++|
T Consensus       123 ~v~~~v~~i~~~~G~IDiLVNNAG~~~r~~p~tG~~~~s~~~pig~~~~~~~~d~~~~~~~~~~i~~~t~ee~~~~v~Vn  202 (405)
T 3zu3_A          123 IKQLTIDAIKQDLGQVDQVIYSLASPRRTHPKTGEVFNSALKPIGNAVNLRGLDTDKEVIKESVLQPATQSEIDSTVAVM  202 (405)
T ss_dssp             HHHHHHHHHHHHTSCEEEEEECCCCSEEECTTTCCEEECCCCCSSSCEEEEEEETTTTEEEEEEECCCCHHHHHHHHHHH
T ss_pred             HHHHHHHHHHHHcCCCCEEEEcCccccccCccccccccccccccccccccccccccccccccccCCCCCHHHHHHHHHhh
Confidence            999999999999999999999999751             1222                    1335789999999999


Q ss_pred             hHHHH-HHHHHHhh-hhhhcCCeEEEEcCccccccCCCC--ccchHHHHHHHHHHHHHHHHhCC--CeEEEEEecCcccc
Q 044010          158 FWGSV-YTTRFAVP-HLRYTKGKIVVLSSAASWLTAPRM--SFYNASKAALVLFFETLRVELGS--DVGVTIVTPGFIES  231 (248)
Q Consensus       158 ~~~~~-~l~~~~~~-~~~~~~g~iV~isS~~~~~~~~~~--~~Y~~sKaal~~l~~~la~~~~~--~i~v~~v~pg~v~T  231 (248)
                      ..+.| .+++++.+ .|.+++|+||++||..+..+.+.+  ++|++||+++++|++++|.|+++  +||||+|+||++.|
T Consensus       203 ~~~~~~~~~~~~~~~~m~~~gG~IVniSSi~~~~~~p~~~~~aY~AaKaal~~ltrsLA~Ela~~~GIRVNaVaPG~i~T  282 (405)
T 3zu3_A          203 GGEDWQMWIDALLDAGVLAEGAQTTAFTYLGEKITHDIYWNGSIGAAKKDLDQKVLAIRESLAAHGGGDARVSVLKAVVS  282 (405)
T ss_dssp             SSHHHHHHHHHHHHHTCEEEEEEEEEEECCCCGGGTTTTTTSHHHHHHHHHHHHHHHHHHHHHTTTSCEEEEEECCCCCC
T ss_pred             chhHHHHHHHHHHHHhhhhCCcEEEEEeCchhhCcCCCccchHHHHHHHHHHHHHHHHHHHhCcccCeEEEEEEeCCCcC
Confidence            99998 78888765 455556999999999999998888  99999999999999999999976  59999999999999


Q ss_pred             Ccccccc
Q 044010          232 ELTQGKF  238 (248)
Q Consensus       232 ~~~~~~~  238 (248)
                      ++.....
T Consensus       283 ~~s~~ip  289 (405)
T 3zu3_A          283 QASSAIP  289 (405)
T ss_dssp             HHHHTST
T ss_pred             chhhcCC
Confidence            9977553

>1sby_A Alcohol dehydrogenase; ternary complex, NAD, trifluoroethanol, oxidoreductase; HET: NAD; 1.10A {Scaptodrosophila lebanonensis} SCOP: c.2.1.2 PDB: 1b14_A* 1b15_A* 1a4u_A* 1b2l_A* 1b16_A* 3rj5_A* 3rj9_A* 1mg5_A*

Probab=100.00  E-value=1.8e-35  Score=247.73  Aligned_cols=183  Identities=25%  Similarity=0.336  Sum_probs=160.9

Q ss_pred             cCCCCCEEEEcCCCChHHHHHHHHHHHcCCe-EEEEeCCcchHHHHHHHHHhhC-CCcEEEEEccCCCH-HHHHHHHHHH
Q 044010           43 EDVSGKVVIITGASSGIGEHLAYEYARRGAC-LALCARREKSLEEVADTAREIG-SPDVITIRADVSKV-DDCRSLVEET  119 (248)
Q Consensus        43 ~~~~~k~~lVtGg~~gIG~aia~~l~~~G~~-V~l~~r~~~~~~~~~~~l~~~~-~~~v~~~~~D~~~~-~~~~~~~~~~  119 (248)
                      |++++|+++||||++|||++++++|+++|++ |++++|+.++  +..+++.+.. +.++.++.+|++|. ++++++++++
T Consensus         1 m~l~~k~vlVtGas~gIG~~~a~~l~~~G~~~v~~~~r~~~~--~~~~~l~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~   78 (254)
T 1sby_A            1 MDLTNKNVIFVAALGGIGLDTSRELVKRNLKNFVILDRVENP--TALAELKAINPKVNITFHTYDVTVPVAESKKLLKKI   78 (254)
T ss_dssp             CCCTTCEEEEETTTSHHHHHHHHHHHHTCCSEEEEEESSCCH--HHHHHHHHHCTTSEEEEEECCTTSCHHHHHHHHHHH
T ss_pred             CCCCCcEEEEECCCChHHHHHHHHHHHCCCcEEEEEecCchH--HHHHHHHHhCCCceEEEEEEecCCChHHHHHHHHHH
Confidence            4689999999999999999999999999996 9999998743  2333444332 34788999999998 9999999999


Q ss_pred             HhHcCCccEEEEccccCCcccccccCChHHHHHHHHhhhHHHHHHHHHHhhhhhhc----CCeEEEEcCccccccCCCCc
Q 044010          120 MNHFGRLDHLVNNAGISSVALFEDIVNITDFKQIMNINFWGSVYTTRFAVPHLRYT----KGKIVVLSSAASWLTAPRMS  195 (248)
Q Consensus       120 ~~~~g~id~vv~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~----~g~iV~isS~~~~~~~~~~~  195 (248)
                      .+++|++|++|||||..         +.++|++.+++|+.+++.+++.+.|.|.++    +|+||++||.++..+.++..
T Consensus        79 ~~~~g~id~lv~~Ag~~---------~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~~~~~~g~iv~isS~~~~~~~~~~~  149 (254)
T 1sby_A           79 FDQLKTVDILINGAGIL---------DDHQIERTIAINFTGLVNTTTAILDFWDKRKGGPGGIIANICSVTGFNAIHQVP  149 (254)
T ss_dssp             HHHHSCCCEEEECCCCC---------CTTCHHHHHHHHTHHHHHHHHHHHHHHCGGGTCCCEEEEEECCGGGTSCCTTSH
T ss_pred             HHhcCCCCEEEECCccC---------CHHHHhhhheeeehhHHHHHHHHHHHHHHhcCCCCCEEEEECchhhccCCCCch
Confidence            99999999999999974         236789999999999999999999998654    48999999999999989999


Q ss_pred             cchHHHHHHHHHHHHHHHHhCC-CeEEEEEecCccccCcccc
Q 044010          196 FYNASKAALVLFFETLRVELGS-DVGVTIVTPGFIESELTQG  236 (248)
Q Consensus       196 ~Y~~sKaal~~l~~~la~~~~~-~i~v~~v~pg~v~T~~~~~  236 (248)
                      .|++||+++++++++++.++++ +|+||+|+||+++|++.+.
T Consensus       150 ~Y~~sK~a~~~~~~~la~~~~~~gi~v~~v~Pg~v~t~~~~~  191 (254)
T 1sby_A          150 VYSASKAAVVSFTNSLAKLAPITGVTAYSINPGITRTPLVHT  191 (254)
T ss_dssp             HHHHHHHHHHHHHHHHHHHHHHHSEEEEEEEECSEESHHHHS
T ss_pred             HHHHHHHHHHHHHHHHHHHhccCCeEEEEEecCCccCccccc
Confidence            9999999999999999999875 6999999999999998764

>1yxm_A Pecra, peroxisomal trans 2-enoyl COA reductase; perioxisomes, fatty acid synthesis, short-chain dehydrogenases/reductases, structural genomics; HET: ADE; 1.90A {Homo sapiens} SCOP: c.2.1.2

Probab=100.00  E-value=8.6e-35  Score=249.40  Aligned_cols=191  Identities=23%  Similarity=0.408  Sum_probs=170.9

Q ss_pred             cccCCCCCEEEEcCCCChHHHHHHHHHHHcCCeEEEEeCCcchHHHHHHHHHhh----CCCcEEEEEccCCCHHHHHHHH
Q 044010           41 FSEDVSGKVVIITGASSGIGEHLAYEYARRGACLALCARREKSLEEVADTAREI----GSPDVITIRADVSKVDDCRSLV  116 (248)
Q Consensus        41 ~~~~~~~k~~lVtGg~~gIG~aia~~l~~~G~~V~l~~r~~~~~~~~~~~l~~~----~~~~v~~~~~D~~~~~~~~~~~  116 (248)
                      .+.++++|+++||||++|||++++++|+++|++|++++|+.++.++..+++++.    .+.++.++.+|++|.+++++++
T Consensus        12 ~~~~l~~k~vlVTGasggIG~~la~~l~~~G~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~~~~D~~~~~~v~~~~   91 (303)
T 1yxm_A           12 APGLLQGQVAIVTGGATGIGKAIVKELLELGSNVVIASRKLERLKSAADELQANLPPTKQARVIPIQCNIRNEEEVNNLV   91 (303)
T ss_dssp             CTTTTTTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHTSCTTCCCCEEEEECCTTCHHHHHHHH
T ss_pred             CcCCCCCCEEEEECCCcHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhhccccCCccEEEEecCCCCHHHHHHHH
Confidence            345789999999999999999999999999999999999998888888887652    2347899999999999999999


Q ss_pred             HHHHhHcCCccEEEEccccCCcccccccCChHHHHHHHHhhhHHHHHHHHHHhhh-hhhcCCeEEEEcCccccccCCCCc
Q 044010          117 EETMNHFGRLDHLVNNAGISSVALFEDIVNITDFKQIMNINFWGSVYTTRFAVPH-LRYTKGKIVVLSSAASWLTAPRMS  195 (248)
Q Consensus       117 ~~~~~~~g~id~vv~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~-~~~~~g~iV~isS~~~~~~~~~~~  195 (248)
                      +++.+++|++|++|||||.....+..+ .+.++|++.+++|+.+++++++++.|. +++.+|+||++||.. ..+.+...
T Consensus        92 ~~~~~~~g~id~li~~Ag~~~~~~~~~-~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~~~~~iv~isS~~-~~~~~~~~  169 (303)
T 1yxm_A           92 KSTLDTFGKINFLVNNGGGQFLSPAEH-ISSKGWHAVLETNLTGTFYMCKAVYSSWMKEHGGSIVNIIVPT-KAGFPLAV  169 (303)
T ss_dssp             HHHHHHHSCCCEEEECCCCCCCCCGGG-CCHHHHHHHHHHHTHHHHHHHHHHHHHTHHHHCEEEEEECCCC-TTCCTTCH
T ss_pred             HHHHHHcCCCCEEEECCCCCCCCchhh-CCHHHHHHHHHHHhHHHHHHHHHHHHHHHHhcCCeEEEEEeec-ccCCCcch
Confidence            999999999999999999766555544 477999999999999999999999995 455578999999988 77788889


Q ss_pred             cchHHHHHHHHHHHHHHHHhCC-CeEEEEEecCccccCc
Q 044010          196 FYNASKAALVLFFETLRVELGS-DVGVTIVTPGFIESEL  233 (248)
Q Consensus       196 ~Y~~sKaal~~l~~~la~~~~~-~i~v~~v~pg~v~T~~  233 (248)
                      .|+++|+++.+++++++.++.+ +|+|++|+||++.|++
T Consensus       170 ~Y~~sK~a~~~~~~~la~e~~~~gi~v~~v~Pg~v~t~~  208 (303)
T 1yxm_A          170 HSGAARAGVYNLTKSLALEWACSGIRINCVAPGVIYSQT  208 (303)
T ss_dssp             HHHHHHHHHHHHHHHHHHHTGGGTEEEEEEEECSBCCTG
T ss_pred             hhHHHHHHHHHHHHHHHHHhcccCeEEEEEecCCcccch
Confidence            9999999999999999999976 5999999999999995

>2gdz_A NAD+-dependent 15-hydroxyprostaglandin dehydrogen; dehydrogenase, structural genomics, SH dehydrogenase/reductase, inflammation; HET: NAD; 1.65A {Homo sapiens} SCOP: c.2.1.2

Probab=100.00  E-value=2.7e-35  Score=248.38  Aligned_cols=184  Identities=28%  Similarity=0.432  Sum_probs=163.9

Q ss_pred             CCCCCEEEEcCCCChHHHHHHHHHHHcCCeEEEEeCCcchHHHHHHHHHhhC-CCcEEEEEccCCCHHHHHHHHHHHHhH
Q 044010           44 DVSGKVVIITGASSGIGEHLAYEYARRGACLALCARREKSLEEVADTAREIG-SPDVITIRADVSKVDDCRSLVEETMNH  122 (248)
Q Consensus        44 ~~~~k~~lVtGg~~gIG~aia~~l~~~G~~V~l~~r~~~~~~~~~~~l~~~~-~~~v~~~~~D~~~~~~~~~~~~~~~~~  122 (248)
                      -+++|++|||||++|||++++++|+++|++|++++|+.++.++..+++.+.. +.++.++.+|++|.++++++++++.++
T Consensus         4 m~~~k~vlVTGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~D~~~~~~v~~~~~~~~~~   83 (267)
T 2gdz_A            4 MVNGKVALVTGAAQGIGRAFAEALLLKGAKVALVDWNLEAGVQCKAALHEQFEPQKTLFIQCDVADQQQLRDTFRKVVDH   83 (267)
T ss_dssp             CCTTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHTTTSCGGGEEEEECCTTSHHHHHHHHHHHHHH
T ss_pred             ccCCCEEEEECCCCcHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHhhcCCCceEEEecCCCCHHHHHHHHHHHHHH
Confidence            3689999999999999999999999999999999999887777777775532 336889999999999999999999999


Q ss_pred             cCCccEEEEccccCCcccccccCChHHHHHHHHhhhHHHHHHHHHHhhhhhhc----CCeEEEEcCccccccCCCCccch
Q 044010          123 FGRLDHLVNNAGISSVALFEDIVNITDFKQIMNINFWGSVYTTRFAVPHLRYT----KGKIVVLSSAASWLTAPRMSFYN  198 (248)
Q Consensus       123 ~g~id~vv~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~----~g~iV~isS~~~~~~~~~~~~Y~  198 (248)
                      +|++|++|||||...         .++|++.+++|+.+++.+++.++|.|.+.    .|+||++||..+..+.++...|+
T Consensus        84 ~g~id~lv~~Ag~~~---------~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~~~g~iv~isS~~~~~~~~~~~~Y~  154 (267)
T 2gdz_A           84 FGRLDILVNNAGVNN---------EKNWEKTLQINLVSVISGTYLGLDYMSKQNGGEGGIIINMSSLAGLMPVAQQPVYC  154 (267)
T ss_dssp             HSCCCEEEECCCCCC---------SSSHHHHHHHHTHHHHHHHHHHHHHHCGGGTCCCEEEEEECCGGGTSCCTTCHHHH
T ss_pred             cCCCCEEEECCCCCC---------hhhHHHHHhHHHHHHHHHHHHHHHHHHhccCCCCCEEEEeCCccccCCCCCCchHH
Confidence            999999999999752         25688999999999999999999998653    48999999999999888999999


Q ss_pred             HHHHHHHHHHHHH--HHHhCC-CeEEEEEecCccccCcccc
Q 044010          199 ASKAALVLFFETL--RVELGS-DVGVTIVTPGFIESELTQG  236 (248)
Q Consensus       199 ~sKaal~~l~~~l--a~~~~~-~i~v~~v~pg~v~T~~~~~  236 (248)
                      +||++++++++++  +.|+++ +||||+|+||+++|++...
T Consensus       155 ~sK~a~~~~~~~~ala~e~~~~gi~v~~v~Pg~v~t~~~~~  195 (267)
T 2gdz_A          155 ASKHGIVGFTRSAALAANLMNSGVRLNAICPGFVNTAILES  195 (267)
T ss_dssp             HHHHHHHHHHHHHHHHHHHHTCCEEEEEEEESCBSSHHHHG
T ss_pred             HHHHHHHHHHHHHHHHHHhccCCcEEEEEecCcCcchhhhc
Confidence            9999999999995  688866 5999999999999998654

>1ja9_A 4HNR, 1,3,6,8-tetrahydroxynaphthalene reductase; protein-NADPH-active site inhibitor complex, oxidoreductase, chain dehydrogenase; HET: NDP PYQ; 1.50A {Magnaporthe grisea} SCOP: c.2.1.2

Probab=100.00  E-value=4.2e-35  Score=247.35  Aligned_cols=193  Identities=31%  Similarity=0.508  Sum_probs=172.2

Q ss_pred             ccccCCCCCEEEEcCCCChHHHHHHHHHHHcCCeEEEEeC-CcchHHHHHHHHHhhCCCcEEEEEccCCCHHHHHHHHHH
Q 044010           40 IFSEDVSGKVVIITGASSGIGEHLAYEYARRGACLALCAR-REKSLEEVADTAREIGSPDVITIRADVSKVDDCRSLVEE  118 (248)
Q Consensus        40 ~~~~~~~~k~~lVtGg~~gIG~aia~~l~~~G~~V~l~~r-~~~~~~~~~~~l~~~~~~~v~~~~~D~~~~~~~~~~~~~  118 (248)
                      ...+++++|++|||||++|||++++++|+++|++|++++| +.++.++..+++++.+. ++.++.+|++|.+++++++++
T Consensus        14 ~~~~~~~~k~vlItGasggiG~~la~~l~~~G~~v~~~~r~~~~~~~~~~~~l~~~~~-~~~~~~~D~~~~~~~~~~~~~   92 (274)
T 1ja9_A           14 DASKPLAGKVALTTGAGRGIGRGIAIELGRRGASVVVNYGSSSKAAEEVVAELKKLGA-QGVAIQADISKPSEVVALFDK   92 (274)
T ss_dssp             --CCTTTTCEEEETTTTSHHHHHHHHHHHHTTCEEEEEESSCHHHHHHHHHHHHHTTC-CEEEEECCTTSHHHHHHHHHH
T ss_pred             CCCCCCCCCEEEEeCCCchHHHHHHHHHHHCCCEEEEEcCCchHHHHHHHHHHHhcCC-cEEEEEecCCCHHHHHHHHHH
Confidence            3446789999999999999999999999999999999999 77777777777766543 788999999999999999999


Q ss_pred             HHhHcCCccEEEEccccCCcccccccCChHHHHHHHHhhhHHHHHHHHHHhhhhhhcCCeEEEEcCcccc-ccCCCCccc
Q 044010          119 TMNHFGRLDHLVNNAGISSVALFEDIVNITDFKQIMNINFWGSVYTTRFAVPHLRYTKGKIVVLSSAASW-LTAPRMSFY  197 (248)
Q Consensus       119 ~~~~~g~id~vv~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~g~iV~isS~~~~-~~~~~~~~Y  197 (248)
                      +.++++++|++|||||.....+..+ .+.++|++.+++|+.+++++++++.+.|+ ++++||++||..+. .+.++...|
T Consensus        93 ~~~~~~~~d~vi~~Ag~~~~~~~~~-~~~~~~~~~~~~n~~~~~~l~~~~~~~~~-~~~~iv~~sS~~~~~~~~~~~~~Y  170 (274)
T 1ja9_A           93 AVSHFGGLDFVMSNSGMEVWCDELE-VTQELFDKVFNLNTRGQFFVAQQGLKHCR-RGGRIILTSSIAAVMTGIPNHALY  170 (274)
T ss_dssp             HHHHHSCEEEEECCCCCCCCCCGGG-CCHHHHHHHHHHHTHHHHHHHHHHHHHEE-EEEEEEEECCGGGTCCSCCSCHHH
T ss_pred             HHHHcCCCCEEEECCCCCCCccccc-CCHHHHHHHHHHHHHHHHHHHHHHHHHHh-hCCEEEEEcChHhccCCCCCCchH
Confidence            9999999999999999876655544 57899999999999999999999999987 44899999999988 777888999


Q ss_pred             hHHHHHHHHHHHHHHHHhCC-CeEEEEEecCccccCccc
Q 044010          198 NASKAALVLFFETLRVELGS-DVGVTIVTPGFIESELTQ  235 (248)
Q Consensus       198 ~~sKaal~~l~~~la~~~~~-~i~v~~v~pg~v~T~~~~  235 (248)
                      ++||++++.+++.++.++++ +|++++|+||+++|++..
T Consensus       171 ~~sK~a~~~~~~~~~~e~~~~gi~v~~v~Pg~v~t~~~~  209 (274)
T 1ja9_A          171 AGSKAAVEGFCRAFAVDCGAKGVTVNCIAPGGVKTDMFD  209 (274)
T ss_dssp             HHHHHHHHHHHHHHHHHHGGGTCEEEEEEECCBSSHHHH
T ss_pred             HHHHHHHHHHHHHHHHHhhhcCeEEEEEeeCcccccchh
Confidence            99999999999999999976 599999999999999876

>3orf_A Dihydropteridine reductase; alpha-beta-alpha sandwich, rossmann fold, oxidoreductase (AC NADH), NADH binding, oxidoreductase; HET: NAD; 2.16A {Dictyostelium discoideum}

Probab=100.00  E-value=9.9e-36  Score=249.19  Aligned_cols=184  Identities=16%  Similarity=0.166  Sum_probs=161.5

Q ss_pred             cCCCCCEEEEcCCCChHHHHHHHHHHHcCCeEEEEeCCcchHHHHHHHHHhhCCCcEEEEEccCCCHHHHHHHHHHHHhH
Q 044010           43 EDVSGKVVIITGASSGIGEHLAYEYARRGACLALCARREKSLEEVADTAREIGSPDVITIRADVSKVDDCRSLVEETMNH  122 (248)
Q Consensus        43 ~~~~~k~~lVtGg~~gIG~aia~~l~~~G~~V~l~~r~~~~~~~~~~~l~~~~~~~v~~~~~D~~~~~~~~~~~~~~~~~  122 (248)
                      .+..+|++|||||++|||+++|++|+++|++|++++|+.++.+             -..+.+|++|.++++++++++.++
T Consensus        18 ~~~m~k~vlITGas~gIG~~la~~l~~~G~~V~~~~r~~~~~~-------------~~~~~~d~~d~~~v~~~~~~~~~~   84 (251)
T 3orf_A           18 GSHMSKNILVLGGSGALGAEVVKFFKSKSWNTISIDFRENPNA-------------DHSFTIKDSGEEEIKSVIEKINSK   84 (251)
T ss_dssp             ----CCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESSCCTTS-------------SEEEECSCSSHHHHHHHHHHHHTT
T ss_pred             ccccCCEEEEECCCCHHHHHHHHHHHHCCCEEEEEeCCccccc-------------ccceEEEeCCHHHHHHHHHHHHHH
Confidence            3456899999999999999999999999999999999876432             135789999999999999999999


Q ss_pred             cCCccEEEEccccCCcccccccCChHHHHHHHHhhhHHHHHHHHHHhhhhhhcCCeEEEEcCccccccCCCCccchHHHH
Q 044010          123 FGRLDHLVNNAGISSVALFEDIVNITDFKQIMNINFWGSVYTTRFAVPHLRYTKGKIVVLSSAASWLTAPRMSFYNASKA  202 (248)
Q Consensus       123 ~g~id~vv~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~g~iV~isS~~~~~~~~~~~~Y~~sKa  202 (248)
                      +|++|++|||||...........+.++|++.+++|+.+++.+++++.|.|++ +|+||++||..+..+.++...|++||+
T Consensus        85 ~g~iD~li~~Ag~~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~-~g~iv~isS~~~~~~~~~~~~Y~~sKa  163 (251)
T 3orf_A           85 SIKVDTFVCAAGGWSGGNASSDEFLKSVKGMIDMNLYSAFASAHIGAKLLNQ-GGLFVLTGASAALNRTSGMIAYGATKA  163 (251)
T ss_dssp             TCCEEEEEECCCCCCCBCTTSTTHHHHHHHHHHHHHHHHHHHHHHHHHHEEE-EEEEEEECCGGGGSCCTTBHHHHHHHH
T ss_pred             cCCCCEEEECCccCCCCCcccccCHHHHHHHHHHHhHHHHHHHHHHHHhhcc-CCEEEEEechhhccCCCCCchhHHHHH
Confidence            9999999999998766553333567999999999999999999999999864 689999999999999999999999999


Q ss_pred             HHHHHHHHHHHHhC--C-CeEEEEEecCccccCcccccccc
Q 044010          203 ALVLFFETLRVELG--S-DVGVTIVTPGFIESELTQGKFLT  240 (248)
Q Consensus       203 al~~l~~~la~~~~--~-~i~v~~v~pg~v~T~~~~~~~~~  240 (248)
                      |++.++++++.|++  + +|+||+|+||+++|++.+.....
T Consensus       164 a~~~~~~~la~e~~~~~~gi~v~~v~PG~v~t~~~~~~~~~  204 (251)
T 3orf_A          164 ATHHIIKDLASENGGLPAGSTSLGILPVTLDTPTNRKYMSD  204 (251)
T ss_dssp             HHHHHHHHHTSTTSSSCTTCEEEEEEESCBCCHHHHHHCTT
T ss_pred             HHHHHHHHHHHHhcccCCCcEEEEEecCcCcCcchhhhccc
Confidence            99999999999986  5 59999999999999998765443

>1yo6_A Putative carbonyl reductase sniffer; tyrosine-dependent oxidoreductase (SDR family), structural genomics, PSI; 2.60A {Caenorhabditis elegans} SCOP: c.2.1.2

Probab=100.00  E-value=6.2e-35  Score=242.65  Aligned_cols=187  Identities=25%  Similarity=0.321  Sum_probs=159.6

Q ss_pred             CCCCEEEEcCCCChHHHHHHHHHHHcC--CeEEEEeCCcchHHHHHHHHHhhCCCcEEEEEccCCCHHHHHHHHHHHHhH
Q 044010           45 VSGKVVIITGASSGIGEHLAYEYARRG--ACLALCARREKSLEEVADTAREIGSPDVITIRADVSKVDDCRSLVEETMNH  122 (248)
Q Consensus        45 ~~~k~~lVtGg~~gIG~aia~~l~~~G--~~V~l~~r~~~~~~~~~~~l~~~~~~~v~~~~~D~~~~~~~~~~~~~~~~~  122 (248)
                      |++|++|||||++|||++++++|+++|  ++|++++|+.++.++..+    ..+.++.++.+|++|.++++++++++.++
T Consensus         1 m~~k~vlItGasggiG~~la~~l~~~g~~~~V~~~~r~~~~~~~l~~----~~~~~~~~~~~D~~~~~~~~~~~~~~~~~   76 (250)
T 1yo6_A            1 MSPGSVVVTGANRGIGLGLVQQLVKDKNIRHIIATARDVEKATELKS----IKDSRVHVLPLTVTCDKSLDTFVSKVGEI   76 (250)
T ss_dssp             CCCSEEEESSCSSHHHHHHHHHHHTCTTCCEEEEEESSGGGCHHHHT----CCCTTEEEEECCTTCHHHHHHHHHHHHHH
T ss_pred             CCCCEEEEecCCchHHHHHHHHHHhcCCCcEEEEEecCHHHHHHHHh----ccCCceEEEEeecCCHHHHHHHHHHHHHh
Confidence            568999999999999999999999999  999999999877654432    22347899999999999999999999999


Q ss_pred             cC--CccEEEEccccCC-cccccccCChHHHHHHHHhhhHHHHHHHHHHhhhhhhc------------CCeEEEEcCccc
Q 044010          123 FG--RLDHLVNNAGISS-VALFEDIVNITDFKQIMNINFWGSVYTTRFAVPHLRYT------------KGKIVVLSSAAS  187 (248)
Q Consensus       123 ~g--~id~vv~~ag~~~-~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~------------~g~iV~isS~~~  187 (248)
                      +|  ++|++|||||... ..++.+ .+.+++++.+++|+.+++.+++++.|.|.+.            .++||++||..+
T Consensus        77 ~g~~~id~li~~Ag~~~~~~~~~~-~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~iv~isS~~~  155 (250)
T 1yo6_A           77 VGSDGLSLLINNAGVLLSYGTNTE-PNRAVIAEQLDVNTTSVVLLTQKLLPLLKNAASKESGDQLSVSRAAVITISSGLG  155 (250)
T ss_dssp             HGGGCCCEEEECCCCCCCBCTTSC-CCHHHHHHHHHHHTHHHHHHHHHTHHHHHHHHHSSCSSCCCTTTCEEEEECCGGG
T ss_pred             cCCCCCcEEEECCcccCCCccccc-CCHHHHHHHHHHhhHHHHHHHHHHHHHHhhcccccCCCcccCCCcEEEEeccCcc
Confidence            98  9999999999876 444444 5789999999999999999999999998754            689999999998


Q ss_pred             cccC-------CCCccchHHHHHHHHHHHHHHHHhCC-CeEEEEEecCccccCcccc
Q 044010          188 WLTA-------PRMSFYNASKAALVLFFETLRVELGS-DVGVTIVTPGFIESELTQG  236 (248)
Q Consensus       188 ~~~~-------~~~~~Y~~sKaal~~l~~~la~~~~~-~i~v~~v~pg~v~T~~~~~  236 (248)
                      ..+.       ++...|++||++++.++++++.++++ +|+|++|+||+++|+|...
T Consensus       156 ~~~~~~~~~~~~~~~~Y~~sK~a~~~~~~~la~e~~~~gi~v~~v~Pg~v~t~~~~~  212 (250)
T 1yo6_A          156 SITDNTSGSAQFPVLAYRMSKAAINMFGRTLAVDLKDDNVLVVNFCPGWVQTNLGGK  212 (250)
T ss_dssp             CSTTCCSTTSSSCBHHHHHHHHHHHHHHHHHHHHTGGGTCEEEEEECCCC-------
T ss_pred             ccCCcccccccCCccHHHHHHHHHHHHHHHHHHHhccCCeEEEEEcCCceecCCCCC
Confidence            8775       57789999999999999999999976 5999999999999999764

>2ph3_A 3-oxoacyl-[acyl carrier protein] reductase; TTHA0415, structural genomics, southea collaboratory for structural genomics, secsg; 1.91A {Thermus thermophilus HB8}

Probab=100.00  E-value=4e-35  Score=243.65  Aligned_cols=188  Identities=35%  Similarity=0.512  Sum_probs=168.8

Q ss_pred             CCEEEEcCCCChHHHHHHHHHHHcCCeEEEE-eCCcchHHHHHHHHHhhCCCcEEE-EEccCCCHHHHHHHHHHHHhHcC
Q 044010           47 GKVVIITGASSGIGEHLAYEYARRGACLALC-ARREKSLEEVADTAREIGSPDVIT-IRADVSKVDDCRSLVEETMNHFG  124 (248)
Q Consensus        47 ~k~~lVtGg~~gIG~aia~~l~~~G~~V~l~-~r~~~~~~~~~~~l~~~~~~~v~~-~~~D~~~~~~~~~~~~~~~~~~g  124 (248)
                      +|+++||||++|||++++++|+++|++|+++ +|+.++.++..+++++.+. ++.. +.+|++|.++++++++++.++++
T Consensus         1 ~k~vlITGasggiG~~~a~~l~~~G~~v~~~~~r~~~~~~~~~~~~~~~~~-~~~~~~~~D~~~~~~~~~~~~~~~~~~~   79 (245)
T 2ph3_A            1 MRKALITGASRGIGRAIALRLAEDGFALAIHYGQNREKAEEVAEEARRRGS-PLVAVLGANLLEAEAATALVHQAAEVLG   79 (245)
T ss_dssp             CCEEEETTTTSHHHHHHHHHHHTTTCEEEEEESSCHHHHHHHHHHHHHTTC-SCEEEEECCTTSHHHHHHHHHHHHHHHT
T ss_pred             CCEEEEeCCCchHHHHHHHHHHHCCCEEEEEcCCCHHHHHHHHHHHHhcCC-ceEEEEeccCCCHHHHHHHHHHHHHhcC
Confidence            4799999999999999999999999999998 8988888777777766554 5666 89999999999999999999999


Q ss_pred             CccEEEEccccCCcccccccCChHHHHHHHHhhhHHHHHHHHHHhhhhhhcC-CeEEEEcCccccccCCCCccchHHHHH
Q 044010          125 RLDHLVNNAGISSVALFEDIVNITDFKQIMNINFWGSVYTTRFAVPHLRYTK-GKIVVLSSAASWLTAPRMSFYNASKAA  203 (248)
Q Consensus       125 ~id~vv~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~-g~iV~isS~~~~~~~~~~~~Y~~sKaa  203 (248)
                      ++|++|||||.....++.+ .+.++|++.+++|+.+++.+++.+.|.|++.+ ++||++||..+..+.++...|++||++
T Consensus        80 ~~d~li~~Ag~~~~~~~~~-~~~~~~~~~~~~n~~g~~~l~~~~~~~~~~~~~~~iv~~sS~~~~~~~~~~~~Y~~sK~a  158 (245)
T 2ph3_A           80 GLDTLVNNAGITRDTLLVR-MKDEDWEAVLEANLSAVFRTTREAVKLMMKARFGRIVNITSVVGILGNPGQANYVASKAG  158 (245)
T ss_dssp             CCCEEEECCCCCCCBCGGG-CCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEEECCTHHHHCCSSBHHHHHHHHH
T ss_pred             CCCEEEECCCCCCCCCccc-CCHHHHHHHHhhccHHHHHHHHHHHHHHHhcCCCEEEEEeChhhccCCCCCcchHHHHHH
Confidence            9999999999876555554 47799999999999999999999999987554 899999999988888889999999999


Q ss_pred             HHHHHHHHHHHhCC-CeEEEEEecCccccCcccc
Q 044010          204 LVLFFETLRVELGS-DVGVTIVTPGFIESELTQG  236 (248)
Q Consensus       204 l~~l~~~la~~~~~-~i~v~~v~pg~v~T~~~~~  236 (248)
                      ++.++++++.++++ +|++++|+||+++|++.+.
T Consensus       159 ~~~~~~~la~e~~~~gi~v~~v~Pg~v~t~~~~~  192 (245)
T 2ph3_A          159 LIGFTRAVAKEYAQRGITVNAVAPGFIETEMTER  192 (245)
T ss_dssp             HHHHHHHHHHHHGGGTEEEEEEEECSBCCHHHHT
T ss_pred             HHHHHHHHHHHHHHcCeEEEEEEEEeecCcchhh
Confidence            99999999999976 5999999999999998764

>1gz6_A Estradiol 17 beta-dehydrogenase 4; 17BETA-HSD4, MFE-2, beta-oxidation, peroxisome, SDR, steroid biosynthesis, oxidoreductase, NADP; HET: NAI; 2.38A {Rattus norvegicus} SCOP: c.2.1.2 PDB: 1zbq_A*

Probab=100.00  E-value=4.4e-35  Score=253.58  Aligned_cols=188  Identities=28%  Similarity=0.444  Sum_probs=166.7

Q ss_pred             cCCCCCEEEEcCCCChHHHHHHHHHHHcCCeEEEEe---------CCcchHHHHHHHHHhhCCCcEEEEEccCCCHHHHH
Q 044010           43 EDVSGKVVIITGASSGIGEHLAYEYARRGACLALCA---------RREKSLEEVADTAREIGSPDVITIRADVSKVDDCR  113 (248)
Q Consensus        43 ~~~~~k~~lVtGg~~gIG~aia~~l~~~G~~V~l~~---------r~~~~~~~~~~~l~~~~~~~v~~~~~D~~~~~~~~  113 (248)
                      ++++||++|||||++|||+++|++|+++|++|++.+         |+.++.++..+++++.+. .   ..+|+++.++++
T Consensus         5 ~~l~gk~~lVTGas~GIG~~~a~~La~~Ga~Vv~~~~~~~~~~~~R~~~~~~~~~~~l~~~~~-~---~~~D~~~~~~~~   80 (319)
T 1gz6_A            5 LRFDGRVVLVTGAGGGLGRAYALAFAERGALVVVNDLGGDFKGVGKGSSAADKVVEEIRRRGG-K---AVANYDSVEAGE   80 (319)
T ss_dssp             CCCTTCEEEETTTTSHHHHHHHHHHHHTTCEEEEECCCBCTTSCBCCSHHHHHHHHHHHHTTC-E---EEEECCCGGGHH
T ss_pred             CCCCCCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEcCCcccccccCCHHHHHHHHHHHHhhCC-e---EEEeCCCHHHHH
Confidence            578999999999999999999999999999999964         466677777777776553 2   358999999999


Q ss_pred             HHHHHHHhHcCCccEEEEccccCCcccccccCChHHHHHHHHhhhHHHHHHHHHHhhhhhhcC-CeEEEEcCccccccCC
Q 044010          114 SLVEETMNHFGRLDHLVNNAGISSVALFEDIVNITDFKQIMNINFWGSVYTTRFAVPHLRYTK-GKIVVLSSAASWLTAP  192 (248)
Q Consensus       114 ~~~~~~~~~~g~id~vv~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~-g~iV~isS~~~~~~~~  192 (248)
                      ++++++.+++|++|++|||||.....++.+ .+.++|+..+++|+.|+++++++++|.|++.+ |+||++||..+..+.+
T Consensus        81 ~~~~~~~~~~g~iD~lVnnAG~~~~~~~~~-~~~~~~~~~~~vN~~g~~~l~~~~~~~m~~~~~grIV~vsS~~~~~~~~  159 (319)
T 1gz6_A           81 KLVKTALDTFGRIDVVVNNAGILRDRSFSR-ISDEDWDIIQRVHLRGSFQVTRAAWDHMKKQNYGRIIMTASASGIYGNF  159 (319)
T ss_dssp             HHHHHHHHHTSCCCEEEECCCCCCCCCGGG-CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTCEEEEEECCHHHHHCCT
T ss_pred             HHHHHHHHHcCCCCEEEECCCCCCCCChhh-CCHHHHHHHHHHHhHHHHHHHHHHHHHHHHcCCCEEEEECChhhccCCC
Confidence            999999999999999999999876655554 47799999999999999999999999997554 8999999999888888


Q ss_pred             CCccchHHHHHHHHHHHHHHHHhCC-CeEEEEEecCccccCcccc
Q 044010          193 RMSFYNASKAALVLFFETLRVELGS-DVGVTIVTPGFIESELTQG  236 (248)
Q Consensus       193 ~~~~Y~~sKaal~~l~~~la~~~~~-~i~v~~v~pg~v~T~~~~~  236 (248)
                      +..+|++||++++.|++++++++++ +|+||+|+||++ |++...
T Consensus       160 ~~~~Y~aSK~a~~~~~~~la~el~~~gI~vn~v~PG~~-t~~~~~  203 (319)
T 1gz6_A          160 GQANYSAAKLGLLGLANTLVIEGRKNNIHCNTIAPNAG-SRMTET  203 (319)
T ss_dssp             TCHHHHHHHHHHHHHHHHHHHHTGGGTEEEEEEEEECC-STTTGG
T ss_pred             CCHHHHHHHHHHHHHHHHHHHHhcccCEEEEEEeCCCc-cccccc
Confidence            8999999999999999999999987 599999999998 888664

>1jtv_A 17 beta-hydroxysteroid dehydrogenase type 1; steroid hormones, alternative binding mode, oxidoreductase; HET: TES; 1.54A {Homo sapiens} SCOP: c.2.1.2 PDB: 1dht_A* 1equ_A* 1bhs_A* 1i5r_A* 1qyv_A* 1qyw_A* 1qyx_A* 3dey_X* 3dhe_A* 3hb4_X* 3hb5_X* 3klp_X* 3km0_A* 1iol_A* 1fds_A* 1fdt_A* 3klm_X* 1fdw_A* 1fdu_A* 1fdv_A* ...

Probab=100.00  E-value=1.2e-35  Score=257.95  Aligned_cols=189  Identities=25%  Similarity=0.320  Sum_probs=159.5

Q ss_pred             CCCEEEEcCCCChHHHHHHHHHHHcCCeEEEEeCCcchHHHHHHHHHhh-----CCCcEEEEEccCCCHHHHHHHHHHHH
Q 044010           46 SGKVVIITGASSGIGEHLAYEYARRGACLALCARREKSLEEVADTAREI-----GSPDVITIRADVSKVDDCRSLVEETM  120 (248)
Q Consensus        46 ~~k~~lVtGg~~gIG~aia~~l~~~G~~V~l~~r~~~~~~~~~~~l~~~-----~~~~v~~~~~D~~~~~~~~~~~~~~~  120 (248)
                      ++|++|||||++|||+++|++|+++|++|++++|+..+.++..+.++..     .+.++.++.+|++|.++++++++++.
T Consensus         1 ~~k~vlVTGas~GIG~ala~~L~~~G~~v~~v~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dv~d~~~v~~~~~~~~   80 (327)
T 1jtv_A            1 ARTVVLITGCSSGIGLHLAVRLASDPSQSFKVYATLRDLKTQGRLWEAARALACPPGSLETLQLDVRDSKSVAAARERVT   80 (327)
T ss_dssp             CCEEEEESCCSSHHHHHHHHHHHTCTTCCEEEEEEESCGGGTHHHHHHHHHTTCCTTSEEEEECCTTCHHHHHHHHHTCT
T ss_pred             CCCEEEEECCCCHHHHHHHHHHHHCCCceEEEEeecCcHHHHHHHHHHhhhccCCCCceEEEEecCCCHHHHHHHHHHHh
Confidence            4789999999999999999999999999988888765544444333322     13478999999999999999999883


Q ss_pred             hHcCCccEEEEccccCCcccccccCChHHHHHHHHhhhHHHHHHHHHHhhhhhhc-CCeEEEEcCccccccCCCCccchH
Q 044010          121 NHFGRLDHLVNNAGISSVALFEDIVNITDFKQIMNINFWGSVYTTRFAVPHLRYT-KGKIVVLSSAASWLTAPRMSFYNA  199 (248)
Q Consensus       121 ~~~g~id~vv~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~-~g~iV~isS~~~~~~~~~~~~Y~~  199 (248)
                        .|++|++|||||.....++.+ .+.++|++.+++|+.+++.+++.++|.|+++ .|+||++||.++..+.+....|++
T Consensus        81 --~g~iD~lVnnAG~~~~~~~~~-~~~~~~~~~~~vN~~g~~~l~~~~~p~m~~~~~g~IV~isS~~~~~~~~~~~~Y~a  157 (327)
T 1jtv_A           81 --EGRVDVLVCNAGLGLLGPLEA-LGEDAVASVLDVNVVGTVRMLQAFLPDMKRRGSGRVLVTGSVGGLMGLPFNDVYCA  157 (327)
T ss_dssp             --TSCCSEEEECCCCCCCSCGGG-SCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEEEEEGGGTSCCTTCHHHHH
T ss_pred             --cCCCCEEEECCCcCCCCchhh-CCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcCCCEEEEECCcccccCCCCChHHHH
Confidence              589999999999876555555 5789999999999999999999999998754 589999999999998889999999


Q ss_pred             HHHHHHHHHHHHHHHhCC-CeEEEEEecCccccCccccc
Q 044010          200 SKAALVLFFETLRVELGS-DVGVTIVTPGFIESELTQGK  237 (248)
Q Consensus       200 sKaal~~l~~~la~~~~~-~i~v~~v~pg~v~T~~~~~~  237 (248)
                      ||+++++++++++.|+++ +|+||+|+||+|+|+|....
T Consensus       158 SK~a~~~~~~~la~el~~~gI~v~~v~PG~v~T~~~~~~  196 (327)
T 1jtv_A          158 SKFALEGLCESLAVLLLPFGVHLSLIECGPVHTAFMEKV  196 (327)
T ss_dssp             HHHHHHHHHHHHHHHHGGGTEEEEEEEECCBCC------
T ss_pred             HHHHHHHHHHHHHHHhhhcCcEEEEEEeCcccChHHhhh
Confidence            999999999999999987 59999999999999997653

>1sny_A Sniffer CG10964-PA; alpha and beta protein, rossmann fold, dinucleotide binding oxidoreductase; HET: NAP; 1.75A {Drosophila melanogaster} SCOP: c.2.1.2

Probab=100.00  E-value=1.4e-34  Score=243.61  Aligned_cols=196  Identities=20%  Similarity=0.295  Sum_probs=166.0

Q ss_pred             hhccccCCCCCEEEEcCCCChHHHHHHHHHHHcC---CeEEEEeCCcchHHHHHHHHHhhCCCcEEEEEccCCCHHHHHH
Q 044010           38 NSIFSEDVSGKVVIITGASSGIGEHLAYEYARRG---ACLALCARREKSLEEVADTAREIGSPDVITIRADVSKVDDCRS  114 (248)
Q Consensus        38 ~~~~~~~~~~k~~lVtGg~~gIG~aia~~l~~~G---~~V~l~~r~~~~~~~~~~~l~~~~~~~v~~~~~D~~~~~~~~~  114 (248)
                      +.....++++|++|||||++|||++++++|+++|   ++|++++|+.++.+.. +++.+.+. ++.++.+|++|.+++++
T Consensus        12 ~~~~~~~~~~k~vlITGasggIG~~la~~L~~~G~~~~~V~~~~r~~~~~~~~-~~l~~~~~-~~~~~~~Dl~~~~~v~~   89 (267)
T 1sny_A           12 SGLVPRGSHMNSILITGCNRGLGLGLVKALLNLPQPPQHLFTTCRNREQAKEL-EDLAKNHS-NIHILEIDLRNFDAYDK   89 (267)
T ss_dssp             --------CCSEEEESCCSSHHHHHHHHHHHTSSSCCSEEEEEESCTTSCHHH-HHHHHHCT-TEEEEECCTTCGGGHHH
T ss_pred             ccccccCCCCCEEEEECCCCcHHHHHHHHHHhcCCCCcEEEEEecChhhhHHH-HHhhccCC-ceEEEEecCCChHHHHH
Confidence            3344567899999999999999999999999999   9999999998776644 44444443 78999999999999999


Q ss_pred             HHHHHHhHcC--CccEEEEccccCC-cccccccCChHHHHHHHHhhhHHHHHHHHHHhhhhhhc------------CCeE
Q 044010          115 LVEETMNHFG--RLDHLVNNAGISS-VALFEDIVNITDFKQIMNINFWGSVYTTRFAVPHLRYT------------KGKI  179 (248)
Q Consensus       115 ~~~~~~~~~g--~id~vv~~ag~~~-~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~------------~g~i  179 (248)
                      +++++.+++|  ++|++|||||... ..++.+ .+.+++++.+++|+.+++.+++.+.|.|.+.            .++|
T Consensus        90 ~~~~~~~~~g~~~id~li~~Ag~~~~~~~~~~-~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~i  168 (267)
T 1sny_A           90 LVADIEGVTKDQGLNVLFNNAGIAPKSARITA-VRSQELLDTLQTNTVVPIMLAKACLPLLKKAAKANESQPMGVGRAAI  168 (267)
T ss_dssp             HHHHHHHHHGGGCCSEEEECCCCCCCCCCGGG-CCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHHHHTTTSCSSTTTCEE
T ss_pred             HHHHHHHhcCCCCccEEEECCCcCCCcccccc-CCHHHHHHHHhhhchHHHHHHHHHHHHHhhcccccccccccCCCceE
Confidence            9999999998  8999999999876 444444 5779999999999999999999999998755            5899


Q ss_pred             EEEcCccccccCC---CCccchHHHHHHHHHHHHHHHHhCC-CeEEEEEecCccccCcccc
Q 044010          180 VVLSSAASWLTAP---RMSFYNASKAALVLFFETLRVELGS-DVGVTIVTPGFIESELTQG  236 (248)
Q Consensus       180 V~isS~~~~~~~~---~~~~Y~~sKaal~~l~~~la~~~~~-~i~v~~v~pg~v~T~~~~~  236 (248)
                      |++||..+..+.+   +...|++||++++.++++++.++++ +|+|++|+||+++|+|...
T Consensus       169 v~isS~~~~~~~~~~~~~~~Y~~sK~a~~~~~~~la~e~~~~gi~v~~v~Pg~v~t~~~~~  229 (267)
T 1sny_A          169 INMSSILGSIQGNTDGGMYAYRTSKSALNAATKSLSVDLYPQRIMCVSLHPGWVKTDMGGS  229 (267)
T ss_dssp             EEECCGGGCSTTCCSCCCHHHHHHHHHHHHHHHHHHHHHGGGTCEEEEECCCSBCSTTTCT
T ss_pred             EEEecccccccCCCCCCchHHHHHHHHHHHHHHHHHHHhhcCCcEEEEeCCcceecCCCCC
Confidence            9999998877653   6778999999999999999999987 5999999999999999753

>4e4y_A Short chain dehydrogenase family protein; structural genomics, the center for structural genomics of I diseases, csgid, niaid; 1.80A {Francisella tularensis subsp}

Probab=100.00  E-value=7.3e-36  Score=248.81  Aligned_cols=178  Identities=22%  Similarity=0.358  Sum_probs=158.5

Q ss_pred             CCCCEEEEcCCCChHHHHHHHHHHH-cCCeEEEEeCCcchHHHHHHHHHhhCCCcEEEEEccCCCHHHHHHHHHHHHhHc
Q 044010           45 VSGKVVIITGASSGIGEHLAYEYAR-RGACLALCARREKSLEEVADTAREIGSPDVITIRADVSKVDDCRSLVEETMNHF  123 (248)
Q Consensus        45 ~~~k~~lVtGg~~gIG~aia~~l~~-~G~~V~l~~r~~~~~~~~~~~l~~~~~~~v~~~~~D~~~~~~~~~~~~~~~~~~  123 (248)
                      .++|++|||||++|||+++|++|++ .|++|++.+|+.+.           ....+.++.+|++|.++++++++.+.  +
T Consensus         2 ~~~k~vlITGas~gIG~~~a~~l~~~~g~~v~~~~~~~~~-----------~~~~~~~~~~Dv~~~~~v~~~~~~~~--~   68 (244)
T 4e4y_A            2 NAMANYLVTGGSKGIGKAVVELLLQNKNHTVINIDIQQSF-----------SAENLKFIKADLTKQQDITNVLDIIK--N   68 (244)
T ss_dssp             -CCEEEEEETTTSHHHHHHHHHHTTSTTEEEEEEESSCCC-----------CCTTEEEEECCTTCHHHHHHHHHHTT--T
T ss_pred             CCCCeEEEeCCCChHHHHHHHHHHhcCCcEEEEecccccc-----------ccccceEEecCcCCHHHHHHHHHHHH--h
Confidence            4689999999999999999999999 78899999997652           11257899999999999999996553  7


Q ss_pred             CCccEEEEccccCCcccccccCChHHHHHHHHhhhHHHHHHHHHHhhhhhhcCCeEEEEcCccccccCCCCccchHHHHH
Q 044010          124 GRLDHLVNNAGISSVALFEDIVNITDFKQIMNINFWGSVYTTRFAVPHLRYTKGKIVVLSSAASWLTAPRMSFYNASKAA  203 (248)
Q Consensus       124 g~id~vv~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~g~iV~isS~~~~~~~~~~~~Y~~sKaa  203 (248)
                      +++|++|||||.....+..+ .+.++|++.+++|+.+++++++++.|.|++ +|+||++||..+..+.++..+|++||+|
T Consensus        69 ~~id~lv~nAg~~~~~~~~~-~~~~~~~~~~~vN~~g~~~~~~~~~~~~~~-~g~iv~~sS~~~~~~~~~~~~Y~asKaa  146 (244)
T 4e4y_A           69 VSFDGIFLNAGILIKGSIFD-IDIESIKKVLDLNVWSSIYFIKGLENNLKV-GASIVFNGSDQCFIAKPNSFAYTLSKGA  146 (244)
T ss_dssp             CCEEEEEECCCCCCCBCTTT-SCHHHHHHHHHHHTHHHHHHHHHTGGGEEE-EEEEEEECCGGGTCCCTTBHHHHHHHHH
T ss_pred             CCCCEEEECCccCCCCCccc-CCHHHHHHHHHHccHHHHHHHHHHHHHhcc-CcEEEEECCHHHccCCCCCchhHHHHHH
Confidence            89999999999987766655 578999999999999999999999999874 4899999999999999999999999999


Q ss_pred             HHHHHHHHHHHhCC-CeEEEEEecCccccCccccc
Q 044010          204 LVLFFETLRVELGS-DVGVTIVTPGFIESELTQGK  237 (248)
Q Consensus       204 l~~l~~~la~~~~~-~i~v~~v~pg~v~T~~~~~~  237 (248)
                      +++++++++.|+++ +||||+|+||+++|+|.+..
T Consensus       147 ~~~~~~~la~e~~~~gi~v~~v~PG~v~T~~~~~~  181 (244)
T 4e4y_A          147 IAQMTKSLALDLAKYQIRVNTVCPGTVDTDLYRNL  181 (244)
T ss_dssp             HHHHHHHHHHHHGGGTCEEEEEEESCBCCHHHHHH
T ss_pred             HHHHHHHHHHHHHHcCeEEEEEecCccCchhhHHH
Confidence            99999999999987 49999999999999997654

>3e9n_A Putative short-chain dehydrogenase/reductase; structural genomics, unknown function, oxidoreductase, PSI- 2; 2.40A {Corynebacterium glutamicum}

Probab=100.00  E-value=1.2e-36  Score=253.53  Aligned_cols=189  Identities=23%  Similarity=0.343  Sum_probs=136.6

Q ss_pred             cCCCCCEEEEcCCCChHHHHHHHHHHHcCCeEEEEeCCcchHHHHHHHHHhhCCCcEEEEEccCCCHHHHHHHHHHHHhH
Q 044010           43 EDVSGKVVIITGASSGIGEHLAYEYARRGACLALCARREKSLEEVADTAREIGSPDVITIRADVSKVDDCRSLVEETMNH  122 (248)
Q Consensus        43 ~~~~~k~~lVtGg~~gIG~aia~~l~~~G~~V~l~~r~~~~~~~~~~~l~~~~~~~v~~~~~D~~~~~~~~~~~~~~~~~  122 (248)
                      +++++|++|||||++|||+++|++|++ |++|++++|+.++.++..+    .  .++.++.+|+++.++ .+.+.+..++
T Consensus         1 m~l~~k~vlITGas~gIG~~~a~~l~~-g~~v~~~~r~~~~~~~~~~----~--~~~~~~~~D~~~~~~-~~~~~~~~~~   72 (245)
T 3e9n_A            1 MSLKKKIAVVTGATGGMGIEIVKDLSR-DHIVYALGRNPEHLAALAE----I--EGVEPIESDIVKEVL-EEGGVDKLKN   72 (245)
T ss_dssp             -----CEEEEESTTSHHHHHHHHHHTT-TSEEEEEESCHHHHHHHHT----S--TTEEEEECCHHHHHH-TSSSCGGGTT
T ss_pred             CCCCCCEEEEEcCCCHHHHHHHHHHhC-CCeEEEEeCCHHHHHHHHh----h--cCCcceecccchHHH-HHHHHHHHHh
Confidence            467899999999999999999999987 9999999998876554433    1  268899999999877 5555555577


Q ss_pred             cCCccEEEEccccCCcccccccCChHHHHHHHHhhhHHHHHHHHHHhhhhhhcCCeEEEEcCccccccCCCCccchHHHH
Q 044010          123 FGRLDHLVNNAGISSVALFEDIVNITDFKQIMNINFWGSVYTTRFAVPHLRYTKGKIVVLSSAASWLTAPRMSFYNASKA  202 (248)
Q Consensus       123 ~g~id~vv~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~g~iV~isS~~~~~~~~~~~~Y~~sKa  202 (248)
                      ++++|++|||||.....++.+ .+.++|++.+++|+.+++.+++.++|.|++.+|+||++||..+..+.++...|++||+
T Consensus        73 ~~~id~lv~~Ag~~~~~~~~~-~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~~~g~iv~isS~~~~~~~~~~~~Y~asK~  151 (245)
T 3e9n_A           73 LDHVDTLVHAAAVARDTTIEA-GSVAEWHAHLDLNVIVPAELSRQLLPALRAASGCVIYINSGAGNGPHPGNTIYAASKH  151 (245)
T ss_dssp             CSCCSEEEECC-----------CHHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEEC----------CHHHHHHHH
T ss_pred             cCCCCEEEECCCcCCCCchhh-CCHHHHHHHHHHHhHHHHHHHHHHHHHHhhcCCeEEEEcCcccccCCCCchHHHHHHH
Confidence            889999999999887665555 4779999999999999999999999999877799999999999999999999999999


Q ss_pred             HHHHHHHHHHHHhCC-CeEEEEEecCccccCcccccccc
Q 044010          203 ALVLFFETLRVELGS-DVGVTIVTPGFIESELTQGKFLT  240 (248)
Q Consensus       203 al~~l~~~la~~~~~-~i~v~~v~pg~v~T~~~~~~~~~  240 (248)
                      |+++++++++.|+++ +|+||+|+||+++|+|.+.....
T Consensus       152 a~~~~~~~la~e~~~~gi~v~~v~PG~v~t~~~~~~~~~  190 (245)
T 3e9n_A          152 ALRGLADAFRKEEANNGIRVSTVSPGPTNTPMLQGLMDS  190 (245)
T ss_dssp             HHHHHHHHHHHHHGGGTCEEEEEEECCC-----------
T ss_pred             HHHHHHHHHHHHhhhcCeEEEEEecCCccCchhhhhhhh
Confidence            999999999999987 49999999999999998765443

>3d3w_A L-xylulose reductase; uronate cycle, short-chain dehydrogenase/reductase(SDR) superfamily, glucose metabolism, acetylation, carbohydrate metabolism; HET: NAP; 1.87A {Homo sapiens} PDB: 1wnt_A* 1pr9_A*

Probab=100.00  E-value=6.8e-35  Score=242.38  Aligned_cols=185  Identities=23%  Similarity=0.366  Sum_probs=162.2

Q ss_pred             ccCCCCCEEEEcCCCChHHHHHHHHHHHcCCeEEEEeCCcchHHHHHHHHHhhCCCcEEEEEccCCCHHHHHHHHHHHHh
Q 044010           42 SEDVSGKVVIITGASSGIGEHLAYEYARRGACLALCARREKSLEEVADTAREIGSPDVITIRADVSKVDDCRSLVEETMN  121 (248)
Q Consensus        42 ~~~~~~k~~lVtGg~~gIG~aia~~l~~~G~~V~l~~r~~~~~~~~~~~l~~~~~~~v~~~~~D~~~~~~~~~~~~~~~~  121 (248)
                      .+++++|++|||||++|||++++++|+++|++|++++|+.++.++..+++   .  ...++.+|++|.++++++++    
T Consensus         2 ~~~l~~k~vlITGasggiG~~~a~~l~~~G~~V~~~~r~~~~~~~~~~~~---~--~~~~~~~D~~~~~~~~~~~~----   72 (244)
T 3d3w_A            2 ELFLAGRRVLVTGAGKGIGRGTVQALHATGARVVAVSRTQADLDSLVREC---P--GIEPVCVDLGDWEATERALG----   72 (244)
T ss_dssp             CCCCTTCEEEEESTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHS---T--TCEEEECCTTCHHHHHHHHT----
T ss_pred             ccccCCcEEEEECCCcHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHc---C--CCCEEEEeCCCHHHHHHHHH----
Confidence            45789999999999999999999999999999999999987666554433   1  35667999999999988876    


Q ss_pred             HcCCccEEEEccccCCcccccccCChHHHHHHHHhhhHHHHHHHHHHhhhhhhc--CCeEEEEcCccccccCCCCccchH
Q 044010          122 HFGRLDHLVNNAGISSVALFEDIVNITDFKQIMNINFWGSVYTTRFAVPHLRYT--KGKIVVLSSAASWLTAPRMSFYNA  199 (248)
Q Consensus       122 ~~g~id~vv~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~--~g~iV~isS~~~~~~~~~~~~Y~~  199 (248)
                      +++++|++|||||.....+..+ .+.++|++.+++|+.+++.+++.+.+.|.++  .|+||++||..+..+.++...|++
T Consensus        73 ~~~~id~vi~~Ag~~~~~~~~~-~~~~~~~~~~~~N~~~~~~~~~~~~~~~~~~~~~~~iv~~sS~~~~~~~~~~~~Y~~  151 (244)
T 3d3w_A           73 SVGPVDLLVNNAAVALLQPFLE-VTKEAFDRSFEVNLRAVIQVSQIVARGLIARGVPGAIVNVSSQCSQRAVTNHSVYCS  151 (244)
T ss_dssp             TCCCCCEEEECCCCCCCBCGGG-CCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCCEEEEEECCGGGTSCCTTBHHHHH
T ss_pred             HcCCCCEEEECCccCCCcchhh-CCHHHHHHHHHHHhHHHHHHHHHHHHHHHhCCCCcEEEEeCchhhccCCCCCchHHH
Confidence            5689999999999876555555 4779999999999999999999999998754  589999999999988888999999


Q ss_pred             HHHHHHHHHHHHHHHhCC-CeEEEEEecCccccCcccc
Q 044010          200 SKAALVLFFETLRVELGS-DVGVTIVTPGFIESELTQG  236 (248)
Q Consensus       200 sKaal~~l~~~la~~~~~-~i~v~~v~pg~v~T~~~~~  236 (248)
                      ||++++.++++++.|+++ +|+|++|+||++.|++...
T Consensus       152 sK~a~~~~~~~la~e~~~~~i~v~~v~Pg~v~t~~~~~  189 (244)
T 3d3w_A          152 TKGALDMLTKVMALELGPHKIRVNAVNPTVVMTSMGQA  189 (244)
T ss_dssp             HHHHHHHHHHHHHHHHGGGTEEEEEEEECCBTTTTHHH
T ss_pred             HHHHHHHHHHHHHHHhcccCeEEEEEEeccccccchhh
Confidence            999999999999999976 5999999999999998764

>1zmo_A Halohydrin dehalogenase; haloalcohol dehalogenase, short- chain dehydrogenase/reductase family, lyase; 2.00A {Arthrobacter SP}

Probab=100.00  E-value=1.6e-35  Score=246.88  Aligned_cols=177  Identities=16%  Similarity=0.172  Sum_probs=156.6

Q ss_pred             CCEEEEcCCCChHHHHHHHHHHHcCCeEEEE-e--CCcchHHHHHHHHHhhCCCcEEEEEccCCCHHHHHHHHHHHHhHc
Q 044010           47 GKVVIITGASSGIGEHLAYEYARRGACLALC-A--RREKSLEEVADTAREIGSPDVITIRADVSKVDDCRSLVEETMNHF  123 (248)
Q Consensus        47 ~k~~lVtGg~~gIG~aia~~l~~~G~~V~l~-~--r~~~~~~~~~~~l~~~~~~~v~~~~~D~~~~~~~~~~~~~~~~~~  123 (248)
                      +|++|||||++|||++++++|+++|++|+++ +  |+.++.++..+++   .  .     +|+.|.++++++++++.+++
T Consensus         1 ~k~vlVTGas~gIG~~ia~~l~~~G~~V~~~~~~~r~~~~~~~~~~~~---~--~-----~~~~~~~~v~~~~~~~~~~~   70 (244)
T 1zmo_A            1 MVIALVTHARHFAGPAAVEALTQDGYTVVCHDASFADAAERQRFESEN---P--G-----TIALAEQKPERLVDATLQHG   70 (244)
T ss_dssp             -CEEEESSTTSTTHHHHHHHHHHTTCEEEECCGGGGSHHHHHHHHHHS---T--T-----EEECCCCCGGGHHHHHGGGS
T ss_pred             CCEEEEECCCChHHHHHHHHHHHCCCEEEEecCCcCCHHHHHHHHHHh---C--C-----CcccCHHHHHHHHHHHHHHc
Confidence            5899999999999999999999999999999 6  9887776665554   1  1     23347888899999999999


Q ss_pred             CCccEEEEccccCCc---ccccccCChHHHHHHHHhhhHHHHHHHHHHhhhhhhc-CCeEEEEcCccccccCCCCccchH
Q 044010          124 GRLDHLVNNAGISSV---ALFEDIVNITDFKQIMNINFWGSVYTTRFAVPHLRYT-KGKIVVLSSAASWLTAPRMSFYNA  199 (248)
Q Consensus       124 g~id~vv~~ag~~~~---~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~-~g~iV~isS~~~~~~~~~~~~Y~~  199 (248)
                      |++|++|||||....   .++.+ .+.++|++.+++|+.+++.+++++.|.|.++ .|+||++||..+..+.++...|++
T Consensus        71 g~iD~lv~~Ag~~~~~~~~~~~~-~~~~~~~~~~~~N~~g~~~l~~~~~~~m~~~~~g~iv~isS~~~~~~~~~~~~Y~a  149 (244)
T 1zmo_A           71 EAIDTIVSNDYIPRPMNRLPLEG-TSEADIRQMFEALSIFPILLLQSAIAPLRAAGGASVIFITSSVGKKPLAYNPLYGP  149 (244)
T ss_dssp             SCEEEEEECCCCCTTGGGCCSTT-CCHHHHHHHHHHHTHHHHHHHHHHHHHHHHTTCEEEEEECCGGGTSCCTTCTTHHH
T ss_pred             CCCCEEEECCCcCCCCCCCCccc-CCHHHHHHHHHHHhHHHHHHHHHHHHHHHHcCCcEEEEECChhhCCCCCCchHHHH
Confidence            999999999998766   55555 5789999999999999999999999999755 489999999999999999999999


Q ss_pred             HHHHHHHHHHHHHHHhCC-CeEEEEEecCccccCcc
Q 044010          200 SKAALVLFFETLRVELGS-DVGVTIVTPGFIESELT  234 (248)
Q Consensus       200 sKaal~~l~~~la~~~~~-~i~v~~v~pg~v~T~~~  234 (248)
                      ||+++++++++++.|+++ +||||+|+||+++|+|.
T Consensus       150 sK~a~~~~~~~la~e~~~~gi~v~~v~PG~v~T~~~  185 (244)
T 1zmo_A          150 ARAATVALVESAAKTLSRDGILLYAIGPNFFNNPTY  185 (244)
T ss_dssp             HHHHHHHHHHHHHHHHGGGTEEEEEEEESSBCBTTT
T ss_pred             HHHHHHHHHHHHHHHHhhcCcEEEEEeeCCCcCCcc
Confidence            999999999999999987 49999999999999997

>1zmt_A Haloalcohol dehalogenase HHEC; halohydrin dehalogenase, epoxide catalysis, enantioselectivity, lyase; HET: RNO; 1.70A {Agrobacterium tumefaciens} SCOP: c.2.1.2 PDB: 1pwz_A 1px0_A* 1pwx_A* 1zo8_A*

Probab=100.00  E-value=4.4e-35  Score=245.56  Aligned_cols=181  Identities=17%  Similarity=0.251  Sum_probs=159.1

Q ss_pred             CEEEEcCCCChHHHHHHHHHHHcCCeEEEEeCCcchHHHHHHHHHhhCCCcEEEEEccCCCHHHHHHHHHHHHhHcCCcc
Q 044010           48 KVVIITGASSGIGEHLAYEYARRGACLALCARREKSLEEVADTAREIGSPDVITIRADVSKVDDCRSLVEETMNHFGRLD  127 (248)
Q Consensus        48 k~~lVtGg~~gIG~aia~~l~~~G~~V~l~~r~~~~~~~~~~~l~~~~~~~v~~~~~D~~~~~~~~~~~~~~~~~~g~id  127 (248)
                      |++|||||++|||++++++|+++|++|++++|+.++.+...+ +++.+. ++..+     |.++++++++++.+++|++|
T Consensus         2 k~vlVTGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~-l~~~~~-~~~~~-----d~~~v~~~~~~~~~~~g~iD   74 (254)
T 1zmt_A            2 STAIVTNVKHFGGMGSALRLSEAGHTVACHDESFKQKDELEA-FAETYP-QLKPM-----SEQEPAELIEAVTSAYGQVD   74 (254)
T ss_dssp             CEEEESSTTSTTHHHHHHHHHHTTCEEEECCGGGGSHHHHHH-HHHHCT-TSEEC-----CCCSHHHHHHHHHHHHSCCC
T ss_pred             eEEEEeCCCchHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHH-HHhcCC-cEEEE-----CHHHHHHHHHHHHHHhCCCC
Confidence            689999999999999999999999999999999888777665 655543 44333     77889999999999999999


Q ss_pred             EEEEccccC-CcccccccCChHHHHHHHHhhhHHHHHHHHHHhhhhhhc-CCeEEEEcCccccccCCCCccchHHHHHHH
Q 044010          128 HLVNNAGIS-SVALFEDIVNITDFKQIMNINFWGSVYTTRFAVPHLRYT-KGKIVVLSSAASWLTAPRMSFYNASKAALV  205 (248)
Q Consensus       128 ~vv~~ag~~-~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~-~g~iV~isS~~~~~~~~~~~~Y~~sKaal~  205 (248)
                      ++|||||.. ...++.+ .+.++|++.+++|+.+++.+++++.|.|.++ .|+||++||..+..+.++...|++||++++
T Consensus        75 ~lv~nAg~~~~~~~~~~-~~~~~~~~~~~~N~~g~~~~~~~~~~~~~~~~~g~iv~isS~~~~~~~~~~~~Y~~sK~a~~  153 (254)
T 1zmt_A           75 VLVSNDIFAPEFQPIDK-YAVEDYRGAVEALQIRPFALVNAVASQMKKRKSGHIIFITSATPFGPWKELSTYTSARAGAC  153 (254)
T ss_dssp             EEEEECCCCCCCCCGGG-SCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCCEEEEECCSTTTSCCTTCHHHHHHHHHHH
T ss_pred             EEEECCCcCCCCCChhh-CCHHHHHHHHHHHhHHHHHHHHHHHHHHHHcCCcEEEEECCcccccCCCCchHHHHHHHHHH
Confidence            999999987 5455544 5789999999999999999999999999754 489999999999999899999999999999


Q ss_pred             HHHHHHHHHhCC-CeEEEEEecCcc---------ccCcccc
Q 044010          206 LFFETLRVELGS-DVGVTIVTPGFI---------ESELTQG  236 (248)
Q Consensus       206 ~l~~~la~~~~~-~i~v~~v~pg~v---------~T~~~~~  236 (248)
                      +++++++.|+++ +|+||+|+||++         +|++...
T Consensus       154 ~~~~~la~e~~~~gi~v~~v~PG~v~~~~~~~~~~T~~~~~  194 (254)
T 1zmt_A          154 TLANALSKELGEYNIPVFAIGPNYLHSEDSPYFYPTEPWKT  194 (254)
T ss_dssp             HHHHHHHHHHGGGTCCEEEEEESSBCCBTCCSSCBHHHHTT
T ss_pred             HHHHHHHHHhhhcCcEEEEEecCccccccccccCCCccccc
Confidence            999999999987 499999999999         8887653

>3lt0_A Enoyl-ACP reductase; triclosan, triclosan variant, oxidoredu P.falciparum; HET: NAD FT1; 1.96A {Plasmodium falciparum} SCOP: c.2.1.2 PDB: 1v35_A* 3lsy_A* 1uh5_A* 3lt1_A* 3lt2_A* 3lt4_A* 3am4_A* 3am3_A* 3am5_A* 2o2y_A* 2oos_A* 2ol4_A* 2op0_A* 2op1_A* 1vrw_A* 1zsn_A* 1zw1_A* 1zxb_A* 1zxl_A* 2foi_A* ...

Probab=100.00  E-value=4.9e-36  Score=260.57  Aligned_cols=191  Identities=15%  Similarity=0.176  Sum_probs=160.9

Q ss_pred             CCCEEEEcCCCC--hHHHHHHHHHHHcCCeEEEEeCCc---------chHHHHHHHHHhhC--CCcEEEEEccCCCH--H
Q 044010           46 SGKVVIITGASS--GIGEHLAYEYARRGACLALCARRE---------KSLEEVADTAREIG--SPDVITIRADVSKV--D  110 (248)
Q Consensus        46 ~~k~~lVtGg~~--gIG~aia~~l~~~G~~V~l~~r~~---------~~~~~~~~~l~~~~--~~~v~~~~~D~~~~--~  110 (248)
                      ++|++||||+++  |||+++|++|+++|++|++++|++         ++.+...+......  ...+.++.+|+++.  +
T Consensus         1 ~~k~~lITGas~~~GIG~aiA~~la~~G~~Vv~~~~~~~~~l~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~~   80 (329)
T 3lt0_A            1 NEDICFIAGIGDTNGYGWGIAKELSKRNVKIIFGIWPPVYNIFMKNYKNGKFDNDMIIDKDKKMNILDMLPFDASFDTAN   80 (329)
T ss_dssp             CCCEEEEECCSSSSSHHHHHHHHHHHTTCEEEEEECHHHHHHHHHHHHTTTTTGGGBCSSSCBCCEEEEEECCTTCSSGG
T ss_pred             CCcEEEEECCCCCCchHHHHHHHHHHCCCEEEEEecCccccccccchHHHHHHHHHHHhhcccccccccccccccccchh
Confidence            479999999975  999999999999999999887764         22221111111111  12467899999998  8


Q ss_pred             ------------------HHHHHHHHHHhHcCCccEEEEccccCC--cccccccCChHHHHHHHHhhhHHHHHHHHHHhh
Q 044010          111 ------------------DCRSLVEETMNHFGRLDHLVNNAGISS--VALFEDIVNITDFKQIMNINFWGSVYTTRFAVP  170 (248)
Q Consensus       111 ------------------~~~~~~~~~~~~~g~id~vv~~ag~~~--~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~  170 (248)
                                        +++++++++.+++|++|++|||||+..  ..++.+ .+.++|++.+++|+.+++.++++++|
T Consensus        81 ~~~~~~~~~~~~Dlsd~~~v~~~~~~~~~~~g~iDilVnnAGi~~~~~~~~~~-~~~~~~~~~~~vN~~g~~~l~~~~~p  159 (329)
T 3lt0_A           81 DIDEETKNNKRYNMLQNYTIEDVANLIHQKYGKINMLVHSLANAKEVQKDLLN-TSRKGYLDALSKSSYSLISLCKYFVN  159 (329)
T ss_dssp             GCCHHHHTSHHHHTCCSCSHHHHHHHHHHHHCCEEEEEECCCCCTTTTSCGGG-CCHHHHHHHHHHHTHHHHHHHHHHGG
T ss_pred             hhhhhhcccccccccCHHHHHHHHHHHHHhcCCCcEEEECCcccccCCCCccc-CCHHHHHHHHHHHhHHHHHHHHHHHH
Confidence                              999999999999999999999999742  344444 57899999999999999999999999


Q ss_pred             hhhhcCCeEEEEcCccccccCCCCc-cchHHHHHHHHHHHHHHHHhCC--CeEEEEEecCccccCcccccc
Q 044010          171 HLRYTKGKIVVLSSAASWLTAPRMS-FYNASKAALVLFFETLRVELGS--DVGVTIVTPGFIESELTQGKF  238 (248)
Q Consensus       171 ~~~~~~g~iV~isS~~~~~~~~~~~-~Y~~sKaal~~l~~~la~~~~~--~i~v~~v~pg~v~T~~~~~~~  238 (248)
                      .|+++ |+||++||..+..+.+++. +|++||+|+++|+++++.|+++  +||||+|+||+|+|+|.+...
T Consensus       160 ~m~~~-g~Iv~isS~~~~~~~~~~~~~Y~asKaal~~~~~~la~el~~~~gI~vn~v~PG~v~T~~~~~~~  229 (329)
T 3lt0_A          160 IMKPQ-SSIISLTYHASQKVVPGYGGGMSSAKAALESDTRVLAYHLGRNYNIRINTISAGPLKSRAATAIN  229 (329)
T ss_dssp             GEEEE-EEEEEEECGGGTSCCTTCTTTHHHHHHHHHHHHHHHHHHHHHHHCCEEEEEEECCCCCHHHHTCC
T ss_pred             HHhhC-CeEEEEeCccccCCCCcchHHHHHHHHHHHHHHHHHHHHhCCccCeEEEEEecceeechhHhhhh
Confidence            99754 9999999999999999985 9999999999999999999976  599999999999999988753

>3u0b_A Oxidoreductase, short chain dehydrogenase/reducta protein; structural genomics, ssgcid; 1.70A {Mycobacterium smegmatis} PDB: 3lls_A 3v1t_C 3v1u_A* 4fw8_A* 3q6i_A* 3m1l_A

Probab=100.00  E-value=1.5e-34  Score=261.07  Aligned_cols=189  Identities=27%  Similarity=0.418  Sum_probs=161.8

Q ss_pred             CCCCCEEEEcCCCChHHHHHHHHHHHcCCeEEEEeCCcchHHHHHHHHHhhCCCcEEEEEccCCCHHHHHHHHHHHHhHc
Q 044010           44 DVSGKVVIITGASSGIGEHLAYEYARRGACLALCARREKSLEEVADTAREIGSPDVITIRADVSKVDDCRSLVEETMNHF  123 (248)
Q Consensus        44 ~~~~k~~lVtGg~~gIG~aia~~l~~~G~~V~l~~r~~~~~~~~~~~l~~~~~~~v~~~~~D~~~~~~~~~~~~~~~~~~  123 (248)
                      .+++|++|||||++|||+++|++|+++|++|++++|+... ++..+..++.   .+.++.||++|.++++++++++.+++
T Consensus       210 ~l~gk~~LVTGgsgGIG~aiA~~La~~Ga~Vvl~~r~~~~-~~l~~~~~~~---~~~~~~~Dvtd~~~v~~~~~~~~~~~  285 (454)
T 3u0b_A          210 PLDGKVAVVTGAARGIGATIAEVFARDGATVVAIDVDGAA-EDLKRVADKV---GGTALTLDVTADDAVDKITAHVTEHH  285 (454)
T ss_dssp             TTTTCEEEESSCSSHHHHHHHHHHHHTTCEEEEEECGGGH-HHHHHHHHHH---TCEEEECCTTSTTHHHHHHHHHHHHS
T ss_pred             CCCCCEEEEeCCchHHHHHHHHHHHHCCCEEEEEeCCccH-HHHHHHHHHc---CCeEEEEecCCHHHHHHHHHHHHHHc
Confidence            4689999999999999999999999999999999997532 2333333332   34689999999999999999999999


Q ss_pred             CC-ccEEEEccccCCcccccccCChHHHHHHHHhhhHHHHHHHHHHhhhhhhc-CCeEEEEcCccccccCCCCccchHHH
Q 044010          124 GR-LDHLVNNAGISSVALFEDIVNITDFKQIMNINFWGSVYTTRFAVPHLRYT-KGKIVVLSSAASWLTAPRMSFYNASK  201 (248)
Q Consensus       124 g~-id~vv~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~-~g~iV~isS~~~~~~~~~~~~Y~~sK  201 (248)
                      |+ +|++|||||+.....+.+ .+.++|++.+++|+.+++++.+.+.+.|.++ .++||++||.++..+.+++..|++||
T Consensus       286 g~~id~lV~nAGv~~~~~~~~-~~~~~~~~~~~~nv~g~~~l~~~~~~~~~~~~~g~iV~iSS~a~~~g~~g~~~YaasK  364 (454)
T 3u0b_A          286 GGKVDILVNNAGITRDKLLAN-MDEKRWDAVIAVNLLAPQRLTEGLVGNGTIGEGGRVIGLSSMAGIAGNRGQTNYATTK  364 (454)
T ss_dssp             TTCCSEEEECCCCCCCCCGGG-CCHHHHHHHHHHHTHHHHHHHHHHHHTTSSCTTCEEEEECCHHHHHCCTTCHHHHHHH
T ss_pred             CCCceEEEECCcccCCCcccc-CCHHHHHHHHHHHHHHHHHHHHHHHHhhhhcCCCEEEEEeChHhCCCCCCCHHHHHHH
Confidence            86 999999999987766665 5789999999999999999999999988653 48999999999999999999999999


Q ss_pred             HHHHHHHHHHHHHhCC-CeEEEEEecCccccCccccc
Q 044010          202 AALVLFFETLRVELGS-DVGVTIVTPGFIESELTQGK  237 (248)
Q Consensus       202 aal~~l~~~la~~~~~-~i~v~~v~pg~v~T~~~~~~  237 (248)
                      +++++|+++++.|+++ +|+||+|+||+++|+|.+..
T Consensus       365 aal~~l~~~la~e~~~~gI~vn~v~PG~v~T~~~~~~  401 (454)
T 3u0b_A          365 AGMIGLAEALAPVLADKGITINAVAPGFIETKMTEAI  401 (454)
T ss_dssp             HHHHHHHHHHHHHHHTTTCEEEEEEECSBCC------
T ss_pred             HHHHHHHHHHHHHhhhcCcEEEEEEcCcccChhhhhc
Confidence            9999999999999977 49999999999999998764

>3rd5_A Mypaa.01249.C; ssgcid, structural genomics, seattle structural genomics CEN infectious disease, oxidoreductase; HET: EPE; 1.50A {Mycobacterium paratuberculosis}

Probab=100.00  E-value=2.7e-35  Score=251.58  Aligned_cols=181  Identities=29%  Similarity=0.430  Sum_probs=155.0

Q ss_pred             cCCCCCEEEEcCCCChHHHHHHHHHHHcCCeEEEEeCCcchHHHHHHHHHhhCCCcEEEEEccCCCHHHHHHHHHHHHhH
Q 044010           43 EDVSGKVVIITGASSGIGEHLAYEYARRGACLALCARREKSLEEVADTAREIGSPDVITIRADVSKVDDCRSLVEETMNH  122 (248)
Q Consensus        43 ~~~~~k~~lVtGg~~gIG~aia~~l~~~G~~V~l~~r~~~~~~~~~~~l~~~~~~~v~~~~~D~~~~~~~~~~~~~~~~~  122 (248)
                      .+++||++|||||++|||+++|++|+++|++|++++|+.++.++..+++    +.++.++.+|++|.++++++++++   
T Consensus        12 ~~l~gk~vlVTGas~gIG~~~a~~L~~~G~~V~~~~r~~~~~~~~~~~~----~~~~~~~~~Dl~d~~~v~~~~~~~---   84 (291)
T 3rd5_A           12 PSFAQRTVVITGANSGLGAVTARELARRGATVIMAVRDTRKGEAAARTM----AGQVEVRELDLQDLSSVRRFADGV---   84 (291)
T ss_dssp             CCCTTCEEEEECCSSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHTTS----SSEEEEEECCTTCHHHHHHHHHTC---
T ss_pred             cCCCCCEEEEeCCCChHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHh----cCCeeEEEcCCCCHHHHHHHHHhc---
Confidence            4789999999999999999999999999999999999987766655444    347899999999999999998765   


Q ss_pred             cCCccEEEEccccCCcccccccCChHHHHHHHHhhhHHHHHHHHHHhhhhhhcCCeEEEEcCcccccc------------
Q 044010          123 FGRLDHLVNNAGISSVALFEDIVNITDFKQIMNINFWGSVYTTRFAVPHLRYTKGKIVVLSSAASWLT------------  190 (248)
Q Consensus       123 ~g~id~vv~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~g~iV~isS~~~~~~------------  190 (248)
                       +++|++|||||...+.  .+ .+.++|++.+++|+.+++.+++++.|.|.+   +||++||.++..+            
T Consensus        85 -~~iD~lv~nAg~~~~~--~~-~~~~~~~~~~~vN~~g~~~l~~~~~~~~~~---riv~isS~~~~~~~~~~~~~~~~~~  157 (291)
T 3rd5_A           85 -SGADVLINNAGIMAVP--YA-LTVDGFESQIGTNHLGHFALTNLLLPRLTD---RVVTVSSMAHWPGRINLEDLNWRSR  157 (291)
T ss_dssp             -CCEEEEEECCCCCSCC--CC-BCTTSCBHHHHHHTHHHHHHHHHHGGGEEE---EEEEECCGGGTTCCCCSSCTTCSSS
T ss_pred             -CCCCEEEECCcCCCCc--cc-CCHHHHHHHHHHHHHHHHHHHHHHHHHHHh---heeEeechhhccCCCCccccccccc
Confidence             7899999999987533  22 356889999999999999999999999864   8999999988755            


Q ss_pred             -CCCCccchHHHHHHHHHHHHHHHHhCC-C--eEEEEEecCccccCccccc
Q 044010          191 -APRMSFYNASKAALVLFFETLRVELGS-D--VGVTIVTPGFIESELTQGK  237 (248)
Q Consensus       191 -~~~~~~Y~~sKaal~~l~~~la~~~~~-~--i~v~~v~pg~v~T~~~~~~  237 (248)
                       .++..+|++||++++.+++++++++++ +  |+||+|+||+|+|+|.+..
T Consensus       158 ~~~~~~~Y~~sK~a~~~~~~~la~e~~~~g~~i~v~~v~PG~v~T~~~~~~  208 (291)
T 3rd5_A          158 RYSPWLAYSQSKLANLLFTSELQRRLTAAGSPLRALAAHPGYSHTNLQGAS  208 (291)
T ss_dssp             CCCHHHHHHHHHHHHHHHHHHHHHHHHHTTCCCEEEEECCSGGGSCC----
T ss_pred             CCCCcchHHHHHHHHHHHHHHHHHHHhhCCCCEEEEEeeCCCCcccccccc
Confidence             344568999999999999999999964 3  9999999999999998765

>1cyd_A Carbonyl reductase; short-chain dehydrogenase, oxidoreductase; HET: NAP; 1.80A {Mus musculus} SCOP: c.2.1.2

Probab=100.00  E-value=5.2e-34  Score=236.90  Aligned_cols=184  Identities=23%  Similarity=0.380  Sum_probs=161.1

Q ss_pred             cCCCCCEEEEcCCCChHHHHHHHHHHHcCCeEEEEeCCcchHHHHHHHHHhhCCCcEEEEEccCCCHHHHHHHHHHHHhH
Q 044010           43 EDVSGKVVIITGASSGIGEHLAYEYARRGACLALCARREKSLEEVADTAREIGSPDVITIRADVSKVDDCRSLVEETMNH  122 (248)
Q Consensus        43 ~~~~~k~~lVtGg~~gIG~aia~~l~~~G~~V~l~~r~~~~~~~~~~~l~~~~~~~v~~~~~D~~~~~~~~~~~~~~~~~  122 (248)
                      .++++|++|||||++|||++++++|+++|++|++++|+.++.++..+++   .  .+.++.+|++|.++++++++    +
T Consensus         3 ~~~~~~~vlVTGasggiG~~~a~~l~~~G~~V~~~~r~~~~~~~~~~~~---~--~~~~~~~D~~~~~~~~~~~~----~   73 (244)
T 1cyd_A            3 LNFSGLRALVTGAGKGIGRDTVKALHASGAKVVAVTRTNSDLVSLAKEC---P--GIEPVCVDLGDWDATEKALG----G   73 (244)
T ss_dssp             CCCTTCEEEEESTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHS---T--TCEEEECCTTCHHHHHHHHT----T
T ss_pred             cCCCCCEEEEeCCCchHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHhc---c--CCCcEEecCCCHHHHHHHHH----H
Confidence            5789999999999999999999999999999999999987665544332   1  45667999999999988876    5


Q ss_pred             cCCccEEEEccccCCcccccccCChHHHHHHHHhhhHHHHHHHHHHhhhhhhc--CCeEEEEcCccccccCCCCccchHH
Q 044010          123 FGRLDHLVNNAGISSVALFEDIVNITDFKQIMNINFWGSVYTTRFAVPHLRYT--KGKIVVLSSAASWLTAPRMSFYNAS  200 (248)
Q Consensus       123 ~g~id~vv~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~--~g~iV~isS~~~~~~~~~~~~Y~~s  200 (248)
                      ++++|++|||||.....+..+ .+.++|++.+++|+.+++.+++.+.|.|.++  .++||++||..+..+.++...|++|
T Consensus        74 ~~~id~vi~~Ag~~~~~~~~~-~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~~~~~~iv~~sS~~~~~~~~~~~~Y~~s  152 (244)
T 1cyd_A           74 IGPVDLLVNNAALVIMQPFLE-VTKEAFDRSFSVNLRSVFQVSQMVARDMINRGVPGSIVNVSSMVAHVTFPNLITYSST  152 (244)
T ss_dssp             CCCCSEEEECCCCCCCBCGGG-CCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCCEEEEEECCGGGTSCCTTBHHHHHH
T ss_pred             cCCCCEEEECCcccCCCCccc-CCHHHHHHHHhhhhHHHHHHHHHHHHHHHhCCCCeEEEEEcchhhcCCCCCcchhHHH
Confidence            688999999999876555555 4779999999999999999999999998754  5899999999999888889999999


Q ss_pred             HHHHHHHHHHHHHHhCC-CeEEEEEecCccccCcccc
Q 044010          201 KAALVLFFETLRVELGS-DVGVTIVTPGFIESELTQG  236 (248)
Q Consensus       201 Kaal~~l~~~la~~~~~-~i~v~~v~pg~v~T~~~~~  236 (248)
                      |++++.++++++.++++ +|++++|+||.+.|++...
T Consensus       153 K~a~~~~~~~~a~~~~~~gi~v~~v~pg~v~t~~~~~  189 (244)
T 1cyd_A          153 KGAMTMLTKAMAMELGPHKIRVNSVNPTVVLTDMGKK  189 (244)
T ss_dssp             HHHHHHHHHHHHHHHGGGTEEEEEEEECCBTTHHHHH
T ss_pred             HHHHHHHHHHHHHHhhhcCeEEEEEecCcccCccccc
Confidence            99999999999999976 5999999999999998653

>1wma_A Carbonyl reductase [NADPH] 1; oxidoreductase; HET: AB3 NDP PE5 P33; 1.24A {Homo sapiens} SCOP: c.2.1.2 PDB: 3bhi_A* 3bhj_A* 3bhm_A* 2pfg_A* 1n5d_A* 2hrb_A*

Probab=100.00  E-value=5.5e-34  Score=240.04  Aligned_cols=189  Identities=21%  Similarity=0.274  Sum_probs=163.7

Q ss_pred             CCCCEEEEcCCCChHHHHHHHHHHH-cCCeEEEEeCCcchHHHHHHHHHhhCCCcEEEEEccCCCHHHHHHHHHHHHhHc
Q 044010           45 VSGKVVIITGASSGIGEHLAYEYAR-RGACLALCARREKSLEEVADTAREIGSPDVITIRADVSKVDDCRSLVEETMNHF  123 (248)
Q Consensus        45 ~~~k~~lVtGg~~gIG~aia~~l~~-~G~~V~l~~r~~~~~~~~~~~l~~~~~~~v~~~~~D~~~~~~~~~~~~~~~~~~  123 (248)
                      .++|++|||||++|||++++++|++ +|++|++++|+.++.++..+++++.+ .++.++.+|++|.++++++++++.+++
T Consensus         2 ~~~k~vlITGasggIG~~~a~~L~~~~g~~V~~~~r~~~~~~~~~~~l~~~~-~~~~~~~~Dl~~~~~~~~~~~~~~~~~   80 (276)
T 1wma_A            2 SGIHVALVTGGNKGIGLAIVRDLCRLFSGDVVLTARDVTRGQAAVQQLQAEG-LSPRFHQLDIDDLQSIRALRDFLRKEY   80 (276)
T ss_dssp             CCCCEEEESSCSSHHHHHHHHHHHHHSSSEEEEEESSHHHHHHHHHHHHHTT-CCCEEEECCTTCHHHHHHHHHHHHHHH
T ss_pred             CCCCEEEEeCCCcHHHHHHHHHHHHhcCCeEEEEeCChHHHHHHHHHHHhcC-CeeEEEECCCCCHHHHHHHHHHHHHhc
Confidence            4689999999999999999999999 99999999999888888888887654 378899999999999999999999999


Q ss_pred             CCccEEEEccccCCcccccccCChHHHHHHHHhhhHHHHHHHHHHhhhhhhcCCeEEEEcCccccccC------------
Q 044010          124 GRLDHLVNNAGISSVALFEDIVNITDFKQIMNINFWGSVYTTRFAVPHLRYTKGKIVVLSSAASWLTA------------  191 (248)
Q Consensus       124 g~id~vv~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~g~iV~isS~~~~~~~------------  191 (248)
                      +++|++|||||....... .....+++++.+++|+.+++++++.+.|.|++ .|+||++||..+..+.            
T Consensus        81 g~id~li~~Ag~~~~~~~-~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~-~g~iv~~sS~~~~~~~~~~~~~~~~~~~  158 (276)
T 1wma_A           81 GGLDVLVNNAGIAFKVAD-PTPFHIQAEVTMKTNFFGTRDVCTELLPLIKP-QGRVVNVSSIMSVRALKSCSPELQQKFR  158 (276)
T ss_dssp             SSEEEEEECCCCCCCTTC-CSCHHHHHHHHHHHHTHHHHHHHHHHGGGEEE-EEEEEEECCHHHHHHHHTSCHHHHHHHH
T ss_pred             CCCCEEEECCcccccCCC-ccccHHHHHhhhheeeeeHHHHHHHHHHhhCC-CCEEEEECChhhhcccccCChhHHhhcc
Confidence            999999999998754332 21125889999999999999999999999864 5899999998776320            


Q ss_pred             -----------------------------CCCccchHHHHHHHHHHHHHHHHhCC-----CeEEEEEecCccccCcccc
Q 044010          192 -----------------------------PRMSFYNASKAALVLFFETLRVELGS-----DVGVTIVTPGFIESELTQG  236 (248)
Q Consensus       192 -----------------------------~~~~~Y~~sKaal~~l~~~la~~~~~-----~i~v~~v~pg~v~T~~~~~  236 (248)
                                                   .+...|++||++++.+++.+++++++     +|+|++|+||+|+|+|.+.
T Consensus       159 ~~~~~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~sK~a~~~~~~~la~~~~~~~~~~~i~v~~v~PG~v~t~~~~~  237 (276)
T 1wma_A          159 SETITEEELVGLMNKFVEDTKKGVHQKEGWPSSAYGVTKIGVTVLSRIHARKLSEQRKGDKILLNACCPGWVRTDMAGP  237 (276)
T ss_dssp             CSSCCHHHHHHHHHHHHHHHHTTCTTTTTCCSCHHHHHHHHHHHHHHHHHHHHHHHCTTSCCEEEEEECCSBCSTTTCT
T ss_pred             ccccchhhhhhhhhhhhhhhcccccccCCCccchhHHHHHHHHHHHHHHHHHhhcccCCCceEEEEecCCccccCcCCc
Confidence                                         12378999999999999999999964     5999999999999999764

>2ptg_A Enoyl-acyl carrier reductase; apicomplexa, enoyl (acyl-carrier-P reductase, oxidoreductase; 2.60A {Eimeria tenella}

Probab=100.00  E-value=1.7e-34  Score=249.71  Aligned_cols=194  Identities=22%  Similarity=0.203  Sum_probs=132.2

Q ss_pred             ccCCCCCEEEEcCC--CChHHHHHHHHHHHcCCeEEEEeCCc-----------chHH-----------HHHHHHHhhCCC
Q 044010           42 SEDVSGKVVIITGA--SSGIGEHLAYEYARRGACLALCARRE-----------KSLE-----------EVADTAREIGSP   97 (248)
Q Consensus        42 ~~~~~~k~~lVtGg--~~gIG~aia~~l~~~G~~V~l~~r~~-----------~~~~-----------~~~~~l~~~~~~   97 (248)
                      .++++||++|||||  ++|||+++|++|+++|++|++++|++           ++++           +..+++++.+..
T Consensus         4 ~~~l~~k~~lVTGa~~s~GIG~aia~~la~~G~~Vv~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   83 (319)
T 2ptg_A            4 PVDLRGKTAFVAGVADSNGYGWAICKLLRAAGARVLVGTWPPVYSIFKKGLESSRFEQDSFYAQEPSSKVAAEAAEKPVD   83 (319)
T ss_dssp             CCCCTTCEEEEECCCCTTSHHHHHHHHHHHTTCEEEEEECHHHHHHHHC-------------------------------
T ss_pred             ccccCCCEEEEeCCCCCCcHHHHHHHHHHHCCCEEEEEeccccccchhhhhhhhhhhhhhhhhcchhhhHHHHhhhcccc
Confidence            45789999999999  89999999999999999999998752           1111           122333322210


Q ss_pred             --cEEEEEcc------------CCC--------HHHHHHHHHHHHhHcCCccEEEEccccCC--cccccccCChHHHHHH
Q 044010           98 --DVITIRAD------------VSK--------VDDCRSLVEETMNHFGRLDHLVNNAGISS--VALFEDIVNITDFKQI  153 (248)
Q Consensus        98 --~v~~~~~D------------~~~--------~~~~~~~~~~~~~~~g~id~vv~~ag~~~--~~~~~~~~~~~~~~~~  153 (248)
                        ....+.+|            ++|        .++++++++++.+++|++|++|||||...  ..++.+ .+.++|++.
T Consensus        84 ~~~~~~~~~d~~~~~~~~~~~Dv~~~~~~~~~d~~~v~~~~~~~~~~~g~iD~lVnnAg~~~~~~~~~~~-~~~~~~~~~  162 (319)
T 2ptg_A           84 LVFDKIYPLDAVFDTPQDVPPEVSSNKRYAGVGGFTISEVAEAVRADVGQIDILVHSLANGPEVTKPLLQ-TSRKGYLAA  162 (319)
T ss_dssp             -CCSEEEECCTTCCSGGGSCHHHHCC--CTTSCCCSHHHHHHHHHHHHSCEEEEEEEEECCSSSSSCGGG-CCHHHHHHH
T ss_pred             ccccccccccccccccccccchhcccccccccCHHHHHHHHHHHHHHcCCCCEEEECCccCCCCCCcccc-CCHHHHHHH
Confidence              12334333            333        45899999999999999999999999753  344444 578999999


Q ss_pred             HHhhhHHHHHHHHHHhhhhhhcCCeEEEEcCccccccCCCC-ccchHHHHHHHHHHHHHHHHhCC--CeEEEEEecCccc
Q 044010          154 MNINFWGSVYTTRFAVPHLRYTKGKIVVLSSAASWLTAPRM-SFYNASKAALVLFFETLRVELGS--DVGVTIVTPGFIE  230 (248)
Q Consensus       154 ~~~n~~~~~~l~~~~~~~~~~~~g~iV~isS~~~~~~~~~~-~~Y~~sKaal~~l~~~la~~~~~--~i~v~~v~pg~v~  230 (248)
                      +++|+.+++++++++.|.|++ +|+||++||..+..+.+++ .+|++||+|+++|+++++.|+++  +||||+|+||+|+
T Consensus       163 ~~vN~~g~~~l~~~~~~~m~~-~g~Iv~isS~~~~~~~~~~~~~Y~asKaal~~l~~~la~el~~~~gIrvn~v~PG~v~  241 (319)
T 2ptg_A          163 VSSSSYSFVSLLQHFLPLMKE-GGSALALSYIASEKVIPGYGGGMSSAKAALESDCRTLAFEAGRARAVRVNCISAGPLK  241 (319)
T ss_dssp             HHHHTHHHHHHHHHHGGGEEE-EEEEEEEEECC------------------THHHHHHHHHHHHHHHCCEEEEEEECCCC
T ss_pred             HhHhhHHHHHHHHHHHHHHhc-CceEEEEeccccccccCccchhhHHHHHHHHHHHHHHHHHhccccCeeEEEEeeCCcc
Confidence            999999999999999999974 4899999999998888887 69999999999999999999974  6999999999999


Q ss_pred             cCccccc
Q 044010          231 SELTQGK  237 (248)
Q Consensus       231 T~~~~~~  237 (248)
                      |+|.+..
T Consensus       242 T~~~~~~  248 (319)
T 2ptg_A          242 SRAASAI  248 (319)
T ss_dssp             -------
T ss_pred             Chhhhhc
Confidence            9997653

>3oml_A GH14720P, peroxisomal multifunctional enzyme type 2, CG3415; rossmann fold, hot-DOG fold, hydratase 2 motif, peroxisomes, oxidoreductase; 2.15A {Drosophila melanogaster}

Probab=100.00  E-value=3.4e-34  Score=267.59  Aligned_cols=192  Identities=28%  Similarity=0.413  Sum_probs=153.4

Q ss_pred             cccCCCCCEEEEcCCCChHHHHHHHHHHHcCCeEEEEeC---------CcchHHHHHHHHHhhCCCcEEEEEccCCCHHH
Q 044010           41 FSEDVSGKVVIITGASSGIGEHLAYEYARRGACLALCAR---------REKSLEEVADTAREIGSPDVITIRADVSKVDD  111 (248)
Q Consensus        41 ~~~~~~~k~~lVtGg~~gIG~aia~~l~~~G~~V~l~~r---------~~~~~~~~~~~l~~~~~~~v~~~~~D~~~~~~  111 (248)
                      ...+++||++|||||++|||+++|++|+++|++|++++|         +.+..++..+++++.+. .   ..+|++|.++
T Consensus        13 ~~~~l~gk~~lVTGas~GIG~aiA~~La~~Ga~Vv~~~r~~~~~~~~~~~~~~~~~~~~i~~~~~-~---~~~D~~d~~~   88 (613)
T 3oml_A           13 GKLRYDGRVAVVTGAGAGLGREYALLFAERGAKVVVNDLGGTHSGDGASQRAADIVVDEIRKAGG-E---AVADYNSVID   88 (613)
T ss_dssp             --CCCTTCEEEETTTTSHHHHHHHHHHHHTTCEEEEC--------------CHHHHHHHHHHTTC-C---EEECCCCGGG
T ss_pred             cccCCCCCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEeCCcccccccCCHHHHHHHHHHHHHhCC-e---EEEEeCCHHH
Confidence            346899999999999999999999999999999999988         67778888888877664 3   3489999999


Q ss_pred             HHHHHHHHHhHcCCccEEEEccccCCcccccccCChHHHHHHHHhhhHHHHHHHHHHhhhhhhcC-CeEEEEcCcccccc
Q 044010          112 CRSLVEETMNHFGRLDHLVNNAGISSVALFEDIVNITDFKQIMNINFWGSVYTTRFAVPHLRYTK-GKIVVLSSAASWLT  190 (248)
Q Consensus       112 ~~~~~~~~~~~~g~id~vv~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~-g~iV~isS~~~~~~  190 (248)
                      ++++++++.+++|++|++|||||+....++.+ .+.++|++.+++|+.|+++++++++|.|++++ |+||++||.++..+
T Consensus        89 ~~~~~~~~~~~~g~iDiLVnnAGi~~~~~~~~-~~~~~~~~~~~vNl~g~~~l~~~~~p~m~~~~~g~IV~isS~a~~~~  167 (613)
T 3oml_A           89 GAKVIETAIKAFGRVDILVNNAGILRDRSLVK-TSEQDWNLVNDVHLKGSFKCTQAAFPYMKKQNYGRIIMTSSNSGIYG  167 (613)
T ss_dssp             HHHHHC----------CEECCCCCCCCCCSTT-CCHHHHHHHHHHHHHHHHHHHHHHHHHHHTTTCEEEEEECCHHHHHC
T ss_pred             HHHHHHHHHHHCCCCcEEEECCCCCCCCCccc-CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCCEEEEECCHHHcCC
Confidence            99999999999999999999999987666655 57899999999999999999999999998654 89999999999999


Q ss_pred             CCCCccchHHHHHHHHHHHHHHHHhCC-CeEEEEEecCccccCcccccc
Q 044010          191 APRMSFYNASKAALVLFFETLRVELGS-DVGVTIVTPGFIESELTQGKF  238 (248)
Q Consensus       191 ~~~~~~Y~~sKaal~~l~~~la~~~~~-~i~v~~v~pg~v~T~~~~~~~  238 (248)
                      .++..+|++||+|+++|+++++.|+++ +|+||+|+||.+ |+|.....
T Consensus       168 ~~~~~~Y~asKaal~~lt~~la~e~~~~gI~vn~v~Pg~~-t~~~~~~~  215 (613)
T 3oml_A          168 NFGQVNYTAAKMGLIGLANTVAIEGARNNVLCNVIVPTAA-SRMTEGIL  215 (613)
T ss_dssp             CTTCHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEEC-------CCCC
T ss_pred             CCCChHHHHHHHHHHHHHHHHHHHhCccCeEEEEEECCCC-Chhhhhcc
Confidence            999999999999999999999999987 499999999975 67766543

>2o2s_A Enoyl-acyl carrier reductase; enoyl reductase, triclosan, rossmann fold, oxidoreductase; HET: NAD TCL; 2.60A {Toxoplasma gondii} PDB: 2o50_A 3nj8_A*

Probab=100.00  E-value=2.2e-34  Score=248.60  Aligned_cols=193  Identities=22%  Similarity=0.214  Sum_probs=154.9

Q ss_pred             ccCCCCCEEEEcCC--CChHHHHHHHHHHHcCCeEEEEeCCcch------HH-HHHHHHHhh--CCC--cEEEEEcc---
Q 044010           42 SEDVSGKVVIITGA--SSGIGEHLAYEYARRGACLALCARREKS------LE-EVADTAREI--GSP--DVITIRAD---  105 (248)
Q Consensus        42 ~~~~~~k~~lVtGg--~~gIG~aia~~l~~~G~~V~l~~r~~~~------~~-~~~~~l~~~--~~~--~v~~~~~D---  105 (248)
                      .++++||++|||||  ++|||+++|++|+++|++|++++|++..      .+ ...+++++.  +..  ...++.+|   
T Consensus         4 ~~~l~gk~~lVTGa~~s~GIG~aia~~la~~G~~Vv~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~   83 (315)
T 2o2s_A            4 PIDLRGQTAFVAGVADSHGYGWAIAKHLASAGARVALGTWPPVLGLFQKSLQSGRLDEDRKLPDGSLIEFAGVYPLDAAF   83 (315)
T ss_dssp             CCCCTTCEEEEECCSSSSSHHHHHHHHHHTTTCEEEEEECHHHHHHHHHHHHHTTTHHHHBCTTSCBCCCSCEEECCTTC
T ss_pred             cccCCCCEEEEeCCCCCCChHHHHHHHHHHCCCEEEEEecccccchhhhhhhhhhhhhhhhhhccccccccccccccccc
Confidence            45789999999999  8999999999999999999999986410      00 001112211  110  02334433   


Q ss_pred             ---------CC--------CHHHHHHHHHHHHhHcCCccEEEEccccCC--cccccccCChHHHHHHHHhhhHHHHHHHH
Q 044010          106 ---------VS--------KVDDCRSLVEETMNHFGRLDHLVNNAGISS--VALFEDIVNITDFKQIMNINFWGSVYTTR  166 (248)
Q Consensus       106 ---------~~--------~~~~~~~~~~~~~~~~g~id~vv~~ag~~~--~~~~~~~~~~~~~~~~~~~n~~~~~~l~~  166 (248)
                               ++        |.++++++++++.+++|++|++|||||...  ..++.+ .+.++|++.+++|+.+++.+++
T Consensus        84 ~~~~~~~~Dv~~~~~~~~~d~~~v~~~~~~~~~~~g~iD~lVnnAg~~~~~~~~~~~-~~~~~~~~~~~~N~~g~~~l~~  162 (315)
T 2o2s_A           84 DKPEDVPQDIKDNKRYAGVDGYTIKEVAVKVKQDLGNIDILVHSLANGPEVTKPLLE-TSRKGYLAASSNSAYSFVSLLQ  162 (315)
T ss_dssp             SSTTSSCHHHHTCGGGSSCCCCSHHHHHHHHHHHHCSEEEEEECCCCCTTTTSCGGG-CCHHHHHHHHHHHTHHHHHHHH
T ss_pred             cccchhhhhhhcccccccCCHHHHHHHHHHHHHhcCCCCEEEECCccCCcCCCCccc-CCHHHHHHHHhhhhHHHHHHHH
Confidence                     33        366899999999999999999999999763  344444 5789999999999999999999


Q ss_pred             HHhhhhhhcCCeEEEEcCccccccCCCC-ccchHHHHHHHHHHHHHHHHhC--CCeEEEEEecCccccCcccc
Q 044010          167 FAVPHLRYTKGKIVVLSSAASWLTAPRM-SFYNASKAALVLFFETLRVELG--SDVGVTIVTPGFIESELTQG  236 (248)
Q Consensus       167 ~~~~~~~~~~g~iV~isS~~~~~~~~~~-~~Y~~sKaal~~l~~~la~~~~--~~i~v~~v~pg~v~T~~~~~  236 (248)
                      ++.|.|++ +|+||++||.++..+.+++ ..|++||+|+++|+++++.|++  .+||||+|+||+|+|+|...
T Consensus       163 ~~~~~m~~-~g~Iv~isS~~~~~~~~~~~~~Y~asKaal~~l~~~la~el~~~~gIrvn~v~PG~v~T~~~~~  234 (315)
T 2o2s_A          163 HFGPIMNE-GGSAVTLSYLAAERVVPGYGGGMSSAKAALESDTRTLAWEAGQKYGVRVNAISAGPLKSRAASA  234 (315)
T ss_dssp             HHSTTEEE-EEEEEEEEEGGGTSCCTTCCTTHHHHHHHHHHHHHHHHHHHHHHTCCEEEEEEECCCCCHHHHH
T ss_pred             HHHHHHhc-CCEEEEEecccccccCCCccHHHHHHHHHHHHHHHHHHHHhCcccCeEEEEEecccccchhhhh
Confidence            99999964 5899999999999888887 5899999999999999999996  36999999999999998654

>4eue_A Putative reductase CA_C0462; TER, biofuel, synthetic biology, catalytic mechan substrate specificity, oxidoreductase; HET: NAI; 2.00A {Clostridium acetobutylicum} PDB: 4euf_A* 4euh_A*

Probab=100.00  E-value=1.6e-33  Score=250.61  Aligned_cols=194  Identities=13%  Similarity=0.016  Sum_probs=164.1

Q ss_pred             CCCCCEEEEcCCCChHHHH--HHHHHHHcCCeEEEEeCCcch------------HHHHHHHHHhhCCCcEEEEEccCCCH
Q 044010           44 DVSGKVVIITGASSGIGEH--LAYEYARRGACLALCARREKS------------LEEVADTAREIGSPDVITIRADVSKV  109 (248)
Q Consensus        44 ~~~~k~~lVtGg~~gIG~a--ia~~l~~~G~~V~l~~r~~~~------------~~~~~~~l~~~~~~~v~~~~~D~~~~  109 (248)
                      ...||++|||||++|||++  ++++|+++|++|++++|+...            .+...+.+++.+ .++..+.+|++|.
T Consensus        57 ~~~gK~aLVTGassGIG~A~aia~ala~~Ga~Vi~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~g-~~~~~~~~Dvtd~  135 (418)
T 4eue_A           57 FRGPKKVLIVGASSGFGLATRISVAFGGPEAHTIGVSYETGATDRRIGTAGWYNNIFFKEFAKKKG-LVAKNFIEDAFSN  135 (418)
T ss_dssp             CCCCSEEEEESCSSHHHHHHHHHHHHSSSCCEEEEEECCCCCCSSCCCCHHHHHHHHHHHHHHHTT-CCEEEEESCTTCH
T ss_pred             CCCCCEEEEECCCcHHHHHHHHHHHHHhCCCEEEEEecCcchhhhcccccccchHHHHHHHHHHcC-CcEEEEEeeCCCH
Confidence            3689999999999999999  999999999999999997644            234444444444 4789999999999


Q ss_pred             HHHHHHHHHHHhHcCCccEEEEccccC-------------Cccccc--------------------ccCChHHHHHHHHh
Q 044010          110 DDCRSLVEETMNHFGRLDHLVNNAGIS-------------SVALFE--------------------DIVNITDFKQIMNI  156 (248)
Q Consensus       110 ~~~~~~~~~~~~~~g~id~vv~~ag~~-------------~~~~~~--------------------~~~~~~~~~~~~~~  156 (248)
                      ++++++++++.+++|++|++|||||..             ..+++.                    ++.+.++|++++++
T Consensus       136 ~~v~~~v~~i~~~~G~IDiLVnNAG~~~r~~~~~g~~~~s~~~p~~~~~~~~~~d~~~~~~~~~~~~~~t~e~~~~~~~v  215 (418)
T 4eue_A          136 ETKDKVIKYIKDEFGKIDLFVYSLAAPRRKDYKTGNVYTSRIKTILGDFEGPTIDVERDEITLKKVSSASIEEIEETRKV  215 (418)
T ss_dssp             HHHHHHHHHHHHTTCCEEEEEECCCCSEEECTTTCCEEECCCCBSSSCEEEEEEETTTTEEEEEEECBCCHHHHHHHHHH
T ss_pred             HHHHHHHHHHHHHcCCCCEEEECCcccccccccccccccccccccccccccccccccccccccccccCCCHHHHHHHHHH
Confidence            999999999999999999999999975             112221                    23478999999999


Q ss_pred             hhHHHH-HHHHHHhhh-hhhcCCeEEEEcCccccccCCCC--ccchHHHHHHHHHHHHHHHHhCC-C-eEEEEEecCccc
Q 044010          157 NFWGSV-YTTRFAVPH-LRYTKGKIVVLSSAASWLTAPRM--SFYNASKAALVLFFETLRVELGS-D-VGVTIVTPGFIE  230 (248)
Q Consensus       157 n~~~~~-~l~~~~~~~-~~~~~g~iV~isS~~~~~~~~~~--~~Y~~sKaal~~l~~~la~~~~~-~-i~v~~v~pg~v~  230 (248)
                      |..+.+ .+++++.+. +.+++|+||++||.++..+.|.+  ++|++||+|+++|+++|+.|+++ . ||||+|+||+|+
T Consensus       216 n~~~~~~~~~~~l~~~~~~~~gg~IV~iSSi~~~~~~p~~~~~aY~ASKaAL~~ltrsLA~ELa~~~GIrVN~V~PG~v~  295 (418)
T 4eue_A          216 MGGEDWQEWCEELLYEDCFSDKATTIAYSYIGSPRTYKIYREGTIGIAKKDLEDKAKLINEKLNRVIGGRAFVSVNKALV  295 (418)
T ss_dssp             HSSHHHHHHHHHHHHTTCEEEEEEEEEEECCCCGGGTTTTTTSHHHHHHHHHHHHHHHHHHHHHHHHSCEEEEEECCCCC
T ss_pred             hhHHHHHHHHHHHHHHhhhcCCcEEEEEeCchhcCCCCccccHHHHHHHHHHHHHHHHHHHHhCCccCeEEEEEECCcCc
Confidence            999998 778887754 44456899999999999998888  99999999999999999999987 4 999999999999


Q ss_pred             cCcccccc
Q 044010          231 SELTQGKF  238 (248)
Q Consensus       231 T~~~~~~~  238 (248)
                      |++.....
T Consensus       296 T~~s~~ip  303 (418)
T 4eue_A          296 TKASAYIP  303 (418)
T ss_dssp             CHHHHTST
T ss_pred             ChhhhcCC
Confidence            99887653

>1o5i_A 3-oxoacyl-(acyl carrier protein) reductase; TM1169, structur genomics, JCSG, PSI, protein structure initiative, joint CE structural genomics; HET: NAD; 2.50A {Thermotoga maritima} SCOP: c.2.1.2

Probab=100.00  E-value=1.7e-33  Score=235.40  Aligned_cols=178  Identities=28%  Similarity=0.441  Sum_probs=153.2

Q ss_pred             ccCCCCCEEEEcCCCChHHHHHHHHHHHcCCeEEEEeCCcchHHHHHHHHHhhCCCcEEEEEccCCCHHHHHHHHHHHHh
Q 044010           42 SEDVSGKVVIITGASSGIGEHLAYEYARRGACLALCARREKSLEEVADTAREIGSPDVITIRADVSKVDDCRSLVEETMN  121 (248)
Q Consensus        42 ~~~~~~k~~lVtGg~~gIG~aia~~l~~~G~~V~l~~r~~~~~~~~~~~l~~~~~~~v~~~~~D~~~~~~~~~~~~~~~~  121 (248)
                      ..+++||++|||||++|||++++++|+++|++|++++|+.+..    +++   +  .+.++ +|+  .++++++++++  
T Consensus        14 ~~~~~~k~vlVTGas~gIG~~~a~~l~~~G~~V~~~~r~~~~~----~~~---~--~~~~~-~D~--~~~~~~~~~~~--   79 (249)
T 1o5i_A           14 ELGIRDKGVLVLAASRGIGRAVADVLSQEGAEVTICARNEELL----KRS---G--HRYVV-CDL--RKDLDLLFEKV--   79 (249)
T ss_dssp             --CCTTCEEEEESCSSHHHHHHHHHHHHTTCEEEEEESCHHHH----HHT---C--SEEEE-CCT--TTCHHHHHHHS--
T ss_pred             HhccCCCEEEEECCCCHHHHHHHHHHHHCCCEEEEEcCCHHHH----Hhh---C--CeEEE-eeH--HHHHHHHHHHh--
Confidence            4578999999999999999999999999999999999986321    222   2  56677 999  55677777655  


Q ss_pred             HcCCccEEEEccccCCcccccccCChHHHHHHHHhhhHHHHHHHHHHhhhhhhcC-CeEEEEcCccccccCCCCccchHH
Q 044010          122 HFGRLDHLVNNAGISSVALFEDIVNITDFKQIMNINFWGSVYTTRFAVPHLRYTK-GKIVVLSSAASWLTAPRMSFYNAS  200 (248)
Q Consensus       122 ~~g~id~vv~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~-g~iV~isS~~~~~~~~~~~~Y~~s  200 (248)
                        .++|++|||||.....++.+ .+.++|++.+++|+.+++.+++.++|.|++++ |+||++||..+..+.++...|++|
T Consensus        80 --~~iD~lv~~Ag~~~~~~~~~-~~~~~~~~~~~~N~~g~~~~~~~~~~~~~~~~~g~iv~isS~~~~~~~~~~~~Y~~s  156 (249)
T 1o5i_A           80 --KEVDILVLNAGGPKAGFFDE-LTNEDFKEAIDSLFLNMIKIVRNYLPAMKEKGWGRIVAITSFSVISPIENLYTSNSA  156 (249)
T ss_dssp             --CCCSEEEECCCCCCCBCGGG-CCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEEECCGGGTSCCTTBHHHHHH
T ss_pred             --cCCCEEEECCCCCCCCChhh-CCHHHHHHHHHHHhHHHHHHHHHHHHHHHHcCCcEEEEEcchHhcCCCCCCchHHHH
Confidence              38999999999876655555 57899999999999999999999999997554 899999999999998999999999


Q ss_pred             HHHHHHHHHHHHHHhCC-CeEEEEEecCccccCcccc
Q 044010          201 KAALVLFFETLRVELGS-DVGVTIVTPGFIESELTQG  236 (248)
Q Consensus       201 Kaal~~l~~~la~~~~~-~i~v~~v~pg~v~T~~~~~  236 (248)
                      |+++++++++++.|+++ +|+||+|+||+++|++...
T Consensus       157 K~a~~~~~~~la~e~~~~gi~v~~v~Pg~v~t~~~~~  193 (249)
T 1o5i_A          157 RMALTGFLKTLSFEVAPYGITVNCVAPGWTETERVKE  193 (249)
T ss_dssp             HHHHHHHHHHHHHHHGGGTEEEEEEEECSBCCTTHHH
T ss_pred             HHHHHHHHHHHHHHhhhcCeEEEEEeeCCCccCcccc
Confidence            99999999999999987 5999999999999998754

>1d7o_A Enoyl-[acyl-carrier protein] reductase (NADH) PRE; triclosan, enoyl reductase, oxidoreductase; HET: NAD TCL; 1.90A {Brassica napus} SCOP: c.2.1.2 PDB: 1eno_A* 1enp_A* 1cwu_A*

Probab=100.00  E-value=5.1e-34  Score=244.21  Aligned_cols=191  Identities=20%  Similarity=0.211  Sum_probs=154.7

Q ss_pred             ccCCCCCEEEEcCCC--ChHHHHHHHHHHHcCCeEEEEeCCcc-----------hHHHHHHHHHhhCC--CcEEEEEcc-
Q 044010           42 SEDVSGKVVIITGAS--SGIGEHLAYEYARRGACLALCARREK-----------SLEEVADTAREIGS--PDVITIRAD-  105 (248)
Q Consensus        42 ~~~~~~k~~lVtGg~--~gIG~aia~~l~~~G~~V~l~~r~~~-----------~~~~~~~~l~~~~~--~~v~~~~~D-  105 (248)
                      .++++||++|||||+  +|||+++|++|+++|++|++++|++.           ++++. +++.+ +.  .....+.+| 
T Consensus         3 ~~~l~~k~~lVTGas~~~GIG~aia~~la~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~-~~~~~-~~~~~~~~~~~~~~   80 (297)
T 1d7o_A            3 PIDLRGKRAFIAGIADDNGYGWAVAKSLAAAGAEILVGTWVPALNIFETSLRRGKFDQS-RVLPD-GSLMEIKKVYPLDA   80 (297)
T ss_dssp             CCCCTTCEEEEECCSSSSSHHHHHHHHHHHTTCEEEEEEEHHHHHHHHHHHHTTTTTGG-GBCTT-SSBCCEEEEEEECT
T ss_pred             ccccCCCEEEEECCCCCCChHHHHHHHHHHCCCeEEEeeccccchhhhhhhhhhHhhhh-hhhcc-ccccccccccccce
Confidence            457899999999999  99999999999999999999987531           11111 11111 10  012334443 


Q ss_pred             -------CC----C--------HHHHHHHHHHHHhHcCCccEEEEccccCC--cccccccCChHHHHHHHHhhhHHHHHH
Q 044010          106 -------VS----K--------VDDCRSLVEETMNHFGRLDHLVNNAGISS--VALFEDIVNITDFKQIMNINFWGSVYT  164 (248)
Q Consensus       106 -------~~----~--------~~~~~~~~~~~~~~~g~id~vv~~ag~~~--~~~~~~~~~~~~~~~~~~~n~~~~~~l  164 (248)
                             ++    |        +++++++++++.+++|++|++|||||...  ..++.+ .+.++|++.+++|+.+++++
T Consensus        81 ~~~~~~dv~~Dv~~~~~~~~~~~~~v~~~~~~~~~~~g~iD~lvnnAg~~~~~~~~~~~-~~~~~~~~~~~vN~~g~~~l  159 (297)
T 1d7o_A           81 VFDNPEDVPEDVKANKRYAGSSNWTVQEAAECVRQDFGSIDILVHSLANGPEVSKPLLE-TSRKGYLAAISASSYSFVSL  159 (297)
T ss_dssp             TCCSGGGSCHHHHTSHHHHHCCCCSHHHHHHHHHHHHSCEEEEEECCCCCTTTTSCGGG-CCHHHHHHHHHHHTHHHHHH
T ss_pred             eccchhhhhhhhhccccccccCHHHHHHHHHHHHHHcCCCCEEEECCccCccCCCCccc-CCHHHHHHHHHHhhhHHHHH
Confidence                   32    2        67899999999999999999999999753  334444 57899999999999999999


Q ss_pred             HHHHhhhhhhcCCeEEEEcCccccccCCCC-ccchHHHHHHHHHHHHHHHHhCC--CeEEEEEecCccccCcccc
Q 044010          165 TRFAVPHLRYTKGKIVVLSSAASWLTAPRM-SFYNASKAALVLFFETLRVELGS--DVGVTIVTPGFIESELTQG  236 (248)
Q Consensus       165 ~~~~~~~~~~~~g~iV~isS~~~~~~~~~~-~~Y~~sKaal~~l~~~la~~~~~--~i~v~~v~pg~v~T~~~~~  236 (248)
                      ++++.|.|++ +|+||++||..+..+.++. .+|++||+|+++|+++++.|+++  +||||+|+||+++|+|...
T Consensus       160 ~~~~~~~m~~-~g~iv~isS~~~~~~~~~~~~~Y~asKaa~~~~~~~la~e~~~~~gi~vn~v~PG~v~T~~~~~  233 (297)
T 1d7o_A          160 LSHFLPIMNP-GGASISLTYIASERIIPGYGGGMSSAKAALESDTRVLAFEAGRKQNIRVNTISAGPLGSRAAKA  233 (297)
T ss_dssp             HHHHGGGEEE-EEEEEEEECGGGTSCCTTCTTTHHHHHHHHHHHHHHHHHHHHHHHCCEEEEEEECCCBCCCSSC
T ss_pred             HHHHHHHhcc-CceEEEEeccccccCCCCcchHHHHHHHHHHHHHHHHHHHhCcccCcEEEEEeccccccchhhh
Confidence            9999999964 5899999999999888887 69999999999999999999973  6999999999999999765

>1uay_A Type II 3-hydroxyacyl-COA dehydrogenase; beta oxidation, fatty acid, structural genomi structural genomics/proteomics initiative, RSGI; HET: ADN; 1.40A {Thermus thermophilus} SCOP: c.2.1.2

Probab=100.00  E-value=1.3e-32  Score=227.94  Aligned_cols=178  Identities=25%  Similarity=0.374  Sum_probs=156.5

Q ss_pred             CCCEEEEcCCCChHHHHHHHHHHHcCCeEEEEeCCcchHHHHHHHHHhhCCCcEEEEEccCCCHHHHHHHHHHHHhHcCC
Q 044010           46 SGKVVIITGASSGIGEHLAYEYARRGACLALCARREKSLEEVADTAREIGSPDVITIRADVSKVDDCRSLVEETMNHFGR  125 (248)
Q Consensus        46 ~~k~~lVtGg~~gIG~aia~~l~~~G~~V~l~~r~~~~~~~~~~~l~~~~~~~v~~~~~D~~~~~~~~~~~~~~~~~~g~  125 (248)
                      ++|++|||||++|||++++++|+++|++|++++|+.+ .            .++.++.+|++|.++++++++++ +++++
T Consensus         1 ~~k~vlVtGasggiG~~la~~l~~~G~~V~~~~r~~~-~------------~~~~~~~~D~~~~~~~~~~~~~~-~~~~~   66 (242)
T 1uay_A            1 MERSALVTGGASGLGRAAALALKARGYRVVVLDLRRE-G------------EDLIYVEGDVTREEDVRRAVARA-QEEAP   66 (242)
T ss_dssp             -CCEEEEETTTSHHHHHHHHHHHHHTCEEEEEESSCC-S------------SSSEEEECCTTCHHHHHHHHHHH-HHHSC
T ss_pred             CCCEEEEeCCCChHHHHHHHHHHHCCCEEEEEccCcc-c------------cceEEEeCCCCCHHHHHHHHHHH-HhhCC
Confidence            3689999999999999999999999999999999864 1            14578999999999999999999 88899


Q ss_pred             ccEEEEccccCCccccccc---CChHHHHHHHHhhhHHHHHHHHHHhhhhhhcC-------CeEEEEcCccccccCCCCc
Q 044010          126 LDHLVNNAGISSVALFEDI---VNITDFKQIMNINFWGSVYTTRFAVPHLRYTK-------GKIVVLSSAASWLTAPRMS  195 (248)
Q Consensus       126 id~vv~~ag~~~~~~~~~~---~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~-------g~iV~isS~~~~~~~~~~~  195 (248)
                      +|++|||||.....+..+.   .+.++|++.+++|+.+++.+++.+.+.|.+.+       |+||++||..+..+.++..
T Consensus        67 ~d~li~~ag~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~~~~~~iv~~sS~~~~~~~~~~~  146 (242)
T 1uay_A           67 LFAVVSAAGVGLAEKILGKEGPHGLESFRRVLEVNLLGTFNVLRLAAWAMRENPPDAEGQRGVIVNTASVAAFEGQIGQA  146 (242)
T ss_dssp             EEEEEECCCCCCCCCSBCSSSBCCHHHHHHHHHHHTHHHHHHHHHHHHHHTTCCCCTTSCSEEEEEECCTHHHHCCTTCH
T ss_pred             ceEEEEcccccCcccccccccccchHHHHHHHHHHhHHHHHHHHHHHHHHHhcCCCCCCCCeEEEEeCChhhccCCCCCc
Confidence            9999999998765544432   23459999999999999999999999987542       3999999999998888899


Q ss_pred             cchHHHHHHHHHHHHHHHHhCC-CeEEEEEecCccccCccccc
Q 044010          196 FYNASKAALVLFFETLRVELGS-DVGVTIVTPGFIESELTQGK  237 (248)
Q Consensus       196 ~Y~~sKaal~~l~~~la~~~~~-~i~v~~v~pg~v~T~~~~~~  237 (248)
                      .|++||++++.++++++.|+++ +|+|++|+||+++|++....
T Consensus       147 ~Y~~sK~a~~~~~~~l~~e~~~~gi~v~~v~Pg~v~t~~~~~~  189 (242)
T 1uay_A          147 AYAASKGGVVALTLPAARELAGWGIRVVTVAPGLFDTPLLQGL  189 (242)
T ss_dssp             HHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECSCSSHHHHTS
T ss_pred             hhhHHHHHHHHHHHHHHHHHhhcCcEEEEEEeccCcchhhhcc
Confidence            9999999999999999999977 59999999999999987653

>3qp9_A Type I polyketide synthase pikaii; rossmann fold, ketoreductase, epimerization, oxidoreductase; 1.88A {Streptomyces venezuelae}

Probab=99.97  E-value=8.3e-31  Score=240.45  Aligned_cols=183  Identities=16%  Similarity=0.149  Sum_probs=159.9

Q ss_pred             CCCEEEEcCCCChHHHHHHHHHHHcCCe-EEEE-eCCc-------------chHHHHHHHHHhhCCCcEEEEEccCCCHH
Q 044010           46 SGKVVIITGASSGIGEHLAYEYARRGAC-LALC-ARRE-------------KSLEEVADTAREIGSPDVITIRADVSKVD  110 (248)
Q Consensus        46 ~~k~~lVtGg~~gIG~aia~~l~~~G~~-V~l~-~r~~-------------~~~~~~~~~l~~~~~~~v~~~~~D~~~~~  110 (248)
                      ++|++|||||++|||.++|++|+++|++ |+++ +|+.             +..++..+++++.+. ++.++.||++|.+
T Consensus       250 ~~~~vLITGgsgGIG~~lA~~La~~G~~~vvl~~~R~~~~~~~~~~~~~~~~~~~~~~~~l~~~g~-~v~~~~~Dvtd~~  328 (525)
T 3qp9_A          250 ADGTVLVTGAEEPAAAEAARRLARDGAGHLLLHTTPSGSEGAEGTSGAAEDSGLAGLVAELADLGA-TATVVTCDLTDAE  328 (525)
T ss_dssp             TTSEEEESSTTSHHHHHHHHHHHHHTCCEEEEEECCCC---------------CHHHHHHHHHHTC-EEEEEECCTTSHH
T ss_pred             CCCEEEEECCCCcHHHHHHHHHHHcCCCEEEEEeCCCCCCccccccccccCHHHHHHHHHHHhcCC-EEEEEECCCCCHH
Confidence            5799999999999999999999999996 7777 8983             556677777877664 8999999999999


Q ss_pred             HHHHHHHHHHhHcCCccEEEEccccCCcccccccCChHHHHHHHHhhhHHHHHHHHHHhhhhhhc--CCeEEEEcCcccc
Q 044010          111 DCRSLVEETMNHFGRLDHLVNNAGISSVALFEDIVNITDFKQIMNINFWGSVYTTRFAVPHLRYT--KGKIVVLSSAASW  188 (248)
Q Consensus       111 ~~~~~~~~~~~~~g~id~vv~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~--~g~iV~isS~~~~  188 (248)
                      +++++++++. ++|++|++|||||+.....+.+ .+.+++++.+++|+.|++++.+.+.+.++++  .++||++||.++.
T Consensus       329 ~v~~~~~~i~-~~g~id~vVh~AGv~~~~~~~~-~~~~~~~~v~~~nv~g~~~L~~~~~~~~~~~~~~~~iV~~SS~a~~  406 (525)
T 3qp9_A          329 AAARLLAGVS-DAHPLSAVLHLPPTVDSEPLAA-TDADALARVVTAKATAALHLDRLLREAAAAGGRPPVLVLFSSVAAI  406 (525)
T ss_dssp             HHHHHHHTSC-TTSCEEEEEECCCCCCCCCTTT-CCHHHHHHHHHHHHHHHHHHHHHHHHTC----CCCEEEEEEEGGGT
T ss_pred             HHHHHHHHHH-hcCCCcEEEECCcCCCCCchhh-CCHHHHHHHHHHHHHHHHHHHHHhccccccCCCCCEEEEECCHHHc
Confidence            9999999998 7899999999999987766665 5789999999999999999999999998755  5899999999999


Q ss_pred             ccCCCCccchHHHHHHHHHHHHHHHHhCC-CeEEEEEecCccccCccc
Q 044010          189 LTAPRMSFYNASKAALVLFFETLRVELGS-DVGVTIVTPGFIESELTQ  235 (248)
Q Consensus       189 ~~~~~~~~Y~~sKaal~~l~~~la~~~~~-~i~v~~v~pg~v~T~~~~  235 (248)
                      .+.+++..|++||+++++|+    .++.. ++++++|+||+++|+|..
T Consensus       407 ~g~~g~~~YaaaKa~l~~lA----~~~~~~gi~v~sI~pG~~~tgm~~  450 (525)
T 3qp9_A          407 WGGAGQGAYAAGTAFLDALA----GQHRADGPTVTSVAWSPWEGSRVT  450 (525)
T ss_dssp             TCCTTCHHHHHHHHHHHHHH----TSCCSSCCEEEEEEECCBTTSGGG
T ss_pred             CCCCCCHHHHHHHHHHHHHH----HHHHhCCCCEEEEECCcccccccc
Confidence            99999999999999999874    45555 599999999999999984

>3d7l_A LIN1944 protein; APC89317, structural genomics, PS protein structure initiative, midwest center for structural genomics, MCSG; 2.06A {Listeria innocua}

Probab=99.97  E-value=8.6e-31  Score=211.60  Aligned_cols=164  Identities=14%  Similarity=0.281  Sum_probs=146.8

Q ss_pred             CC-EEEEcCCCChHHHHHHHHHHHcCCeEEEEeCCcchHHHHHHHHHhhCCCcEEEEEccCCCHHHHHHHHHHHHhHcCC
Q 044010           47 GK-VVIITGASSGIGEHLAYEYARRGACLALCARREKSLEEVADTAREIGSPDVITIRADVSKVDDCRSLVEETMNHFGR  125 (248)
Q Consensus        47 ~k-~~lVtGg~~gIG~aia~~l~~~G~~V~l~~r~~~~~~~~~~~l~~~~~~~v~~~~~D~~~~~~~~~~~~~~~~~~g~  125 (248)
                      || +++||||+||||++++++|+ +|++|++++|+.+                  .+.+|++|.++++++++++    ++
T Consensus         2 ~kM~vlVtGasg~iG~~~~~~l~-~g~~V~~~~r~~~------------------~~~~D~~~~~~~~~~~~~~----~~   58 (202)
T 3d7l_A            2 NAMKILLIGASGTLGSAVKERLE-KKAEVITAGRHSG------------------DVTVDITNIDSIKKMYEQV----GK   58 (202)
T ss_dssp             CSCEEEEETTTSHHHHHHHHHHT-TTSEEEEEESSSS------------------SEECCTTCHHHHHHHHHHH----CC
T ss_pred             CCcEEEEEcCCcHHHHHHHHHHH-CCCeEEEEecCcc------------------ceeeecCCHHHHHHHHHHh----CC
Confidence            45 79999999999999999999 9999999999864                  3789999999999998764    78


Q ss_pred             ccEEEEccccCCcccccccCChHHHHHHHHhhhHHHHHHHHHHhhhhhhcCCeEEEEcCccccccCCCCccchHHHHHHH
Q 044010          126 LDHLVNNAGISSVALFEDIVNITDFKQIMNINFWGSVYTTRFAVPHLRYTKGKIVVLSSAASWLTAPRMSFYNASKAALV  205 (248)
Q Consensus       126 id~vv~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~g~iV~isS~~~~~~~~~~~~Y~~sKaal~  205 (248)
                      +|++|||||.....+..+ .+.++|++.+++|+.+++.+++.+.+.|++ +++||++||..+..+.++...|+++|++++
T Consensus        59 ~d~vi~~ag~~~~~~~~~-~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~-~~~iv~~sS~~~~~~~~~~~~Y~~sK~~~~  136 (202)
T 3d7l_A           59 VDAIVSATGSATFSPLTE-LTPEKNAVTISSKLGGQINLVLLGIDSLND-KGSFTLTTGIMMEDPIVQGASAAMANGAVT  136 (202)
T ss_dssp             EEEEEECCCCCCCCCGGG-CCHHHHHHHHHTTTHHHHHHHHTTGGGEEE-EEEEEEECCGGGTSCCTTCHHHHHHHHHHH
T ss_pred             CCEEEECCCCCCCCChhh-CCHHHHHHHHhhccHHHHHHHHHHHHHhcc-CCEEEEEcchhhcCCCCccHHHHHHHHHHH
Confidence            999999999876555554 578999999999999999999999999864 489999999999888888999999999999


Q ss_pred             HHHHHHHHHhCCCeEEEEEecCccccCccc
Q 044010          206 LFFETLRVELGSDVGVTIVTPGFIESELTQ  235 (248)
Q Consensus       206 ~l~~~la~~~~~~i~v~~v~pg~v~T~~~~  235 (248)
                      .+++.++.|+..++++++|+||++.|++..
T Consensus       137 ~~~~~~~~e~~~gi~v~~v~pg~v~~~~~~  166 (202)
T 3d7l_A          137 AFAKSAAIEMPRGIRINTVSPNVLEESWDK  166 (202)
T ss_dssp             HHHHHHTTSCSTTCEEEEEEECCBGGGHHH
T ss_pred             HHHHHHHHHccCCeEEEEEecCccCCchhh
Confidence            999999999933699999999999999753

>1fjh_A 3alpha-hydroxysteroid dehydrogenase/carbonyl reductase; short chain dehydrogenase, SDR, xenobiotic, metyrapone, oligomerisation; 1.68A {Comamonas testosteroni} SCOP: c.2.1.2 PDB: 1fk8_A*

Probab=99.97  E-value=6.3e-32  Score=226.13  Aligned_cols=165  Identities=21%  Similarity=0.296  Sum_probs=134.5

Q ss_pred             CEEEEcCCCChHHHHHHHHHHHcCCeEEEEeCCcchHHHHHHHHHhhCCCcEEEEEccCCCHHHHHHHHHHHHhHcCCcc
Q 044010           48 KVVIITGASSGIGEHLAYEYARRGACLALCARREKSLEEVADTAREIGSPDVITIRADVSKVDDCRSLVEETMNHFGRLD  127 (248)
Q Consensus        48 k~~lVtGg~~gIG~aia~~l~~~G~~V~l~~r~~~~~~~~~~~l~~~~~~~v~~~~~D~~~~~~~~~~~~~~~~~~g~id  127 (248)
                      |++|||||++|||++++++|+++|++|++++|+.++.+.           .   +.+|++|.++++++++++   .+++|
T Consensus         2 k~vlVTGas~gIG~~~a~~l~~~G~~V~~~~r~~~~~~~-----------~---~~~Dl~~~~~v~~~~~~~---~~~id   64 (257)
T 1fjh_A            2 SIIVISGCATGIGAATRKVLEAAGHQIVGIDIRDAEVIA-----------D---LSTAEGRKQAIADVLAKC---SKGMD   64 (257)
T ss_dssp             CEEEEETTTSHHHHHHHHHHHHTTCEEEEEESSSSSEEC-----------C---TTSHHHHHHHHHHHHTTC---TTCCS
T ss_pred             CEEEEeCCCCHHHHHHHHHHHHCCCEEEEEeCCchhhcc-----------c---cccCCCCHHHHHHHHHHh---CCCCC
Confidence            689999999999999999999999999999998765321           1   678999999998887632   37999


Q ss_pred             EEEEccccCCcccccccCChHHHHHHHHhhhHHHHHHHHHHhhhhhhcC-CeEEEEcCcccc------------------
Q 044010          128 HLVNNAGISSVALFEDIVNITDFKQIMNINFWGSVYTTRFAVPHLRYTK-GKIVVLSSAASW------------------  188 (248)
Q Consensus       128 ~vv~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~-g~iV~isS~~~~------------------  188 (248)
                      ++|||||...+.        +.|++.+++|+.+++.+++.+.|.|++++ |+||++||..+.                  
T Consensus        65 ~lv~~Ag~~~~~--------~~~~~~~~~N~~g~~~l~~~~~~~~~~~~~g~iv~isS~~~~~~~~~~~~~~~~~~~~~~  136 (257)
T 1fjh_A           65 GLVLCAGLGPQT--------KVLGNVVSVNYFGATELMDAFLPALKKGHQPAAVVISSVASAHLAFDKNPLALALEAGEE  136 (257)
T ss_dssp             EEEECCCCCTTC--------SSHHHHHHHHTHHHHHHHHHHHHHHHTSSSCEEEEECCGGGGSSCGGGCTTHHHHHHTCH
T ss_pred             EEEECCCCCCCc--------ccHHHHHHHhhHHHHHHHHHHHHHHhhcCCcEEEEECChhhhccccccchhhhhhcccch
Confidence            999999976421        23889999999999999999999997554 899999999887                  


Q ss_pred             ----------ccCCCCccchHHHHHHHHHHHHHHHHhCC-CeEEEEEecCccccCccccc
Q 044010          189 ----------LTAPRMSFYNASKAALVLFFETLRVELGS-DVGVTIVTPGFIESELTQGK  237 (248)
Q Consensus       189 ----------~~~~~~~~Y~~sKaal~~l~~~la~~~~~-~i~v~~v~pg~v~T~~~~~~  237 (248)
                                .+.++...|++||++++.++++++.++++ +|+||+|+||+++|++.+..
T Consensus       137 ~~~~~~~~~~~~~~~~~~Y~~sK~a~~~~~~~la~e~~~~gi~v~~v~PG~v~t~~~~~~  196 (257)
T 1fjh_A          137 AKARAIVEHAGEQGGNLAYAGSKNALTVAVRKRAAAWGEAGVRLNTIAPGATETPLLQAG  196 (257)
T ss_dssp             HHHHHHHHTCCTTHHHHHHHHHHHHHHHHHHHTHHHHHHTTCEEEEEEECC---------
T ss_pred             hhhhhhhhcccCCCCccHHHHHHHHHHHHHHHHHHHHhhcCeEEEEEeeCCCCCccchhh
Confidence                      34446678999999999999999999976 59999999999999997754

>2uv8_A Fatty acid synthase subunit alpha (FAS2); fatty acid biosynthesis, malonyl/palmitoyl transferase, phosphopantetheine, transferase; HET: GVL FMN; 3.10A {Saccharomyces cerevisiae} PDB: 2vkz_A* 3hmj_A*

Probab=99.97  E-value=1.5e-30  Score=261.08  Aligned_cols=191  Identities=19%  Similarity=0.225  Sum_probs=163.7

Q ss_pred             ccCCCCCEEEEcCCCCh-HHHHHHHHHHHcCCeEEEE-eCCcchHHHHHHHHHhh-C--CCcEEEEEccCCCHHHHHHHH
Q 044010           42 SEDVSGKVVIITGASSG-IGEHLAYEYARRGACLALC-ARREKSLEEVADTAREI-G--SPDVITIRADVSKVDDCRSLV  116 (248)
Q Consensus        42 ~~~~~~k~~lVtGg~~g-IG~aia~~l~~~G~~V~l~-~r~~~~~~~~~~~l~~~-~--~~~v~~~~~D~~~~~~~~~~~  116 (248)
                      .++++||++|||||++| ||+++|++|+++|++|+++ +|+.++.++..+++.+. .  +.++.++.||++|.+++++++
T Consensus       670 ~m~l~gKvaLVTGASsGgIG~aIA~~La~~GA~Vvl~~~R~~~~l~~~~~eL~~~~~~~g~~v~~v~~DVsd~~sV~alv  749 (1887)
T 2uv8_A          670 GVTFKDKYVLITGAGKGSIGAEVLQGLLQGGAKVVVTTSRFSKQVTDYYQSIYAKYGAKGSTLIVVPFNQGSKQDVEALI  749 (1887)
T ss_dssp             CBCCTTCEEEEESCCSSSHHHHHHHHHHHTTCEEEEEESSCCHHHHHHHHHHHHHHCCTTCEEEEEECCTTCHHHHHHHH
T ss_pred             cCCCCCCEEEEECCCCcHHHHHHHHHHHHCCCEEEEEecCCHHHHHHHHHHHHHHhhcCCCeEEEEEecCCCHHHHHHHH
Confidence            35789999999999998 9999999999999999998 57777777776666432 1  347889999999999999999


Q ss_pred             HHHHhH-----cC-CccEEEEccccCCcc-cccccCC--hHHHHHHHHhhhHHHHHHHHHH--hhhhhhcC-CeEEEEcC
Q 044010          117 EETMNH-----FG-RLDHLVNNAGISSVA-LFEDIVN--ITDFKQIMNINFWGSVYTTRFA--VPHLRYTK-GKIVVLSS  184 (248)
Q Consensus       117 ~~~~~~-----~g-~id~vv~~ag~~~~~-~~~~~~~--~~~~~~~~~~n~~~~~~l~~~~--~~~~~~~~-g~iV~isS  184 (248)
                      +++.++     +| ++|++|||||+.... ++.+ .+  .++|++.+++|+.+++.+++.+  .|.|.+++ |+||++||
T Consensus       750 ~~i~~~~~~~G~G~~LDiLVNNAGi~~~~~~l~d-~t~~~e~~~~v~~vNv~g~~~l~~a~~~lp~m~~~~~G~IVnISS  828 (1887)
T 2uv8_A          750 EFIYDTEKNGGLGWDLDAIIPFAAIPEQGIELEH-IDSKSEFAHRIMLTNILRMMGCVKKQKSARGIETRPAQVILPMSP  828 (1887)
T ss_dssp             HHHHSCTTTTSCCCCCSEEEECCCCCCCSBCGGG-CCHHHHHHHHHHTHHHHHHHHHHHHHHHTTTCCSCCEEEEEEECS
T ss_pred             HHHHHhccccccCCCCeEEEECCCcCCCCCChhh-CCcchHHHHHHHHHHHHHHHHHHHHHHhhhhhhhCCCCEEEEEcC
Confidence            999998     66 999999999987665 5555 45  7999999999999999999988  78876554 89999999


Q ss_pred             ccccccCCCCccchHHHHHHHHH-HHHHHHHhCCCeEEEEEecCccc-cCccc
Q 044010          185 AASWLTAPRMSFYNASKAALVLF-FETLRVELGSDVGVTIVTPGFIE-SELTQ  235 (248)
Q Consensus       185 ~~~~~~~~~~~~Y~~sKaal~~l-~~~la~~~~~~i~v~~v~pg~v~-T~~~~  235 (248)
                      ..+..+  +...|++||+|+++| ++.++.+++++||||+|+||+++ |+|..
T Consensus       829 ~ag~~g--g~~aYaASKAAL~~Lttr~lA~ela~~IrVNaV~PG~V~tT~m~~  879 (1887)
T 2uv8_A          829 NHGTFG--GDGMYSESKLSLETLFNRWHSESWANQLTVCGAIIGWTRGTGLMS  879 (1887)
T ss_dssp             CTTCSS--CBTTHHHHHHHGGGHHHHHHHSSCTTTEEEEEEEECCEECC----
T ss_pred             hHhccC--CCchHHHHHHHHHHHHHHHHHHHhCCCeEEEEEEecccccccccc
Confidence            998877  678999999999999 99999999877999999999999 89865

>2yut_A Putative short-chain oxidoreductase; alpha and beta proteins (A/B), NAD(P)-binding rossmann-fold structural genomics, NPPSFA; HET: NAP; 2.20A {Thermus thermophilus}

Probab=99.97  E-value=1e-30  Score=211.68  Aligned_cols=172  Identities=24%  Similarity=0.346  Sum_probs=148.9

Q ss_pred             CEEEEcCCCChHHHHHHHHHHHcCCeEEEEeCCcchHHHHHHHHHhhCCCcEEEEEccCCCHHHHHHHHHHHHhHcCCcc
Q 044010           48 KVVIITGASSGIGEHLAYEYARRGACLALCARREKSLEEVADTAREIGSPDVITIRADVSKVDDCRSLVEETMNHFGRLD  127 (248)
Q Consensus        48 k~~lVtGg~~gIG~aia~~l~~~G~~V~l~~r~~~~~~~~~~~l~~~~~~~v~~~~~D~~~~~~~~~~~~~~~~~~g~id  127 (248)
                      |+++||||++|||++++++|+++  +|++++|+.++.++..+++.     . .++.+|++|.+++++++++    ++++|
T Consensus         1 k~vlVtGasg~iG~~la~~l~~~--~V~~~~r~~~~~~~~~~~~~-----~-~~~~~D~~~~~~~~~~~~~----~~~id   68 (207)
T 2yut_A            1 MRVLITGATGGLGGAFARALKGH--DLLLSGRRAGALAELAREVG-----A-RALPADLADELEAKALLEE----AGPLD   68 (207)
T ss_dssp             CEEEEETTTSHHHHHHHHHTTTS--EEEEECSCHHHHHHHHHHHT-----C-EECCCCTTSHHHHHHHHHH----HCSEE
T ss_pred             CEEEEEcCCcHHHHHHHHHHHhC--CEEEEECCHHHHHHHHHhcc-----C-cEEEeeCCCHHHHHHHHHh----cCCCC
Confidence            68999999999999999999999  99999999877766655553     2 7889999999999999886    68999


Q ss_pred             EEEEccccCCcccccccCChHHHHHHHHhhhHHHHHHHHHHhhhhhhcCCeEEEEcCccccccCCCCccchHHHHHHHHH
Q 044010          128 HLVNNAGISSVALFEDIVNITDFKQIMNINFWGSVYTTRFAVPHLRYTKGKIVVLSSAASWLTAPRMSFYNASKAALVLF  207 (248)
Q Consensus       128 ~vv~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~g~iV~isS~~~~~~~~~~~~Y~~sKaal~~l  207 (248)
                      ++|||||.....++.+ .+.++|++.+++|+.+++.+++.+   .++..++||++||..+..+.++...|++||++++.+
T Consensus        69 ~vi~~ag~~~~~~~~~-~~~~~~~~~~~~n~~~~~~l~~~~---~~~~~~~iv~~sS~~~~~~~~~~~~Y~~sK~a~~~~  144 (207)
T 2yut_A           69 LLVHAVGKAGRASVRE-AGRDLVEEMLAAHLLTAAFVLKHA---RFQKGARAVFFGAYPRYVQVPGFAAYAAAKGALEAY  144 (207)
T ss_dssp             EEEECCCCCCCBCSCC----CHHHHHHHHHHHHHHHHHHHC---CEEEEEEEEEECCCHHHHSSTTBHHHHHHHHHHHHH
T ss_pred             EEEECCCcCCCCChhh-CCHHHHHHHHHHHhHHHHHHHHHH---HhcCCcEEEEEcChhhccCCCCcchHHHHHHHHHHH
Confidence            9999999876655544 467899999999999999999998   223348999999999998888899999999999999


Q ss_pred             HHHHHHHhCC-CeEEEEEecCccccCccc
Q 044010          208 FETLRVELGS-DVGVTIVTPGFIESELTQ  235 (248)
Q Consensus       208 ~~~la~~~~~-~i~v~~v~pg~v~T~~~~  235 (248)
                      ++.++.++++ ++++++|+||++.|++..
T Consensus       145 ~~~~~~~~~~~gi~v~~v~pg~v~t~~~~  173 (207)
T 2yut_A          145 LEAARKELLREGVHLVLVRLPAVATGLWA  173 (207)
T ss_dssp             HHHHHHHHHTTTCEEEEECCCCBCSGGGG
T ss_pred             HHHHHHHHhhhCCEEEEEecCcccCCCcc
Confidence            9999999976 599999999999999854

>2pff_A Fatty acid synthase subunit alpha, 3-oxoacyl-[acyl-carrier-PR; fatty acid synthase, acyl-carrier-protein, beta-ketoacyl RED beta-ketoacyl synthase, dehydratase; 4.00A {Saccharomyces cerevisiae}

Probab=99.97  E-value=3.9e-31  Score=258.47  Aligned_cols=191  Identities=18%  Similarity=0.206  Sum_probs=165.5

Q ss_pred             cCCCCCEEEEcCCCCh-HHHHHHHHHHHcCCeEEEE-eCCcchHHHHHHHHHhhC---CCcEEEEEccCCCHHHHHHHHH
Q 044010           43 EDVSGKVVIITGASSG-IGEHLAYEYARRGACLALC-ARREKSLEEVADTAREIG---SPDVITIRADVSKVDDCRSLVE  117 (248)
Q Consensus        43 ~~~~~k~~lVtGg~~g-IG~aia~~l~~~G~~V~l~-~r~~~~~~~~~~~l~~~~---~~~v~~~~~D~~~~~~~~~~~~  117 (248)
                      ++++||++|||||++| ||+++|++|+++|++|+++ +|+.++.++..+++.+..   +.++.++.+|++|.++++++++
T Consensus       472 msL~GKvALVTGASgGGIGrAIAr~LA~~GA~VVL~~~R~~e~lee~a~eL~ael~a~Ga~V~vV~~DVTD~esVeaLVe  551 (1688)
T 2pff_A          472 VTFKDKYVLITGAGKGSIGAEVLQGLLQGGAKVVVTTSRFSKQVTDYYQSIYAKYGAKGSTLIVVPFNQGSKQDVEALIE  551 (1688)
T ss_dssp             CCCCSCCEEECSCSSSSTHHHHHHHHHHHTCEEEEEESSCSTTTTTHHHHTTTTTCCTTCEEEEEECCSSSTTHHHHHHH
T ss_pred             cccCCCEEEEECCChHHHHHHHHHHHHHCcCEEEEEeCCCHHHHHHHHHHHHHHhhcCCCeEEEEEeCCCCHHHHHHHHH
Confidence            5689999999999998 9999999999999999998 677777666666664332   3478899999999999999999


Q ss_pred             HHHhH-----cC-CccEEEEccccCCcc-cccccCC--hHHHHHHHHhhhHHHHHHHHHH--hhhhhhcC-CeEEEEcCc
Q 044010          118 ETMNH-----FG-RLDHLVNNAGISSVA-LFEDIVN--ITDFKQIMNINFWGSVYTTRFA--VPHLRYTK-GKIVVLSSA  185 (248)
Q Consensus       118 ~~~~~-----~g-~id~vv~~ag~~~~~-~~~~~~~--~~~~~~~~~~n~~~~~~l~~~~--~~~~~~~~-g~iV~isS~  185 (248)
                      ++.++     +| ++|++|||||+.... ++.+ .+  .++|++.+++|+.+++.+++.+  .|.|.+++ |+||++||.
T Consensus       552 ~I~e~~~~~GfG~~IDILVNNAGI~~~g~~l~d-lt~s~Ed~~rv~~VNL~G~~~Ltqaa~~lp~M~krggGrIVnISSi  630 (1688)
T 2pff_A          552 FIYDTEKNGGLGWDLDAIIPFAAIPEQGIELEH-IDSKSEFAHRIMLTNILRMMGCVKKQKSARGIETRPAQVILPMSPN  630 (1688)
T ss_dssp             HHHSCTTSSSCCCCCCEEECCCCCCCCSBCSSS-CTTHHHHHHHHTTHHHHHHHHHHHHHHHHHTCTTSCEEECCCCCSC
T ss_pred             HHHHhccccccCCCCeEEEECCCcCCCCCChhh-CCCCHHHHHHHHHHHHHHHHHHHHHHHhChHHHhCCCCEEEEEECh
Confidence            99988     77 999999999987665 5554 45  7999999999999999999998  78887555 899999999


Q ss_pred             cccccCCCCccchHHHHHHHHH-HHHHHHHhCCCeEEEEEecCccc-cCcccc
Q 044010          186 ASWLTAPRMSFYNASKAALVLF-FETLRVELGSDVGVTIVTPGFIE-SELTQG  236 (248)
Q Consensus       186 ~~~~~~~~~~~Y~~sKaal~~l-~~~la~~~~~~i~v~~v~pg~v~-T~~~~~  236 (248)
                      ++..+  +..+|++||+|+++| ++.++.+++++|+||+|+||+++ |+|...
T Consensus       631 AG~~G--g~saYaASKAAL~aLttrsLAeEla~~IRVNaVaPG~V~TT~M~~~  681 (1688)
T 2pff_A          631 HGTFG--GDGMYSESKLSLETLFNRWHSESWANQLTVCGAIIGWTRGTGLMSA  681 (1688)
T ss_dssp             TTTSS--CBTTHHHHHHHHTHHHHHTTTSSCTTTEECCCCCCCCCCCCSSSCT
T ss_pred             HhccC--CchHHHHHHHHHHHHHHHHHHHHcCCCeEEEEEEECcCcCCcccCC
Confidence            88876  678999999999999 88889999877999999999999 788653

>2uv9_A Fatty acid synthase alpha subunits; fungal, dehydratase, enoyl reductase, ketoacyl synthase, ketoacyl reductase; 3.1A {Thermomyces lanuginosus} PDB: 2uvb_A*

Probab=99.97  E-value=8.4e-30  Score=255.36  Aligned_cols=192  Identities=19%  Similarity=0.241  Sum_probs=163.1

Q ss_pred             ccCCCCCEEEEcCCCCh-HHHHHHHHHHHcCCeEEEEe-CCcchHHHHHHHHHh-hC--CCcEEEEEccCCCHHHHHHHH
Q 044010           42 SEDVSGKVVIITGASSG-IGEHLAYEYARRGACLALCA-RREKSLEEVADTARE-IG--SPDVITIRADVSKVDDCRSLV  116 (248)
Q Consensus        42 ~~~~~~k~~lVtGg~~g-IG~aia~~l~~~G~~V~l~~-r~~~~~~~~~~~l~~-~~--~~~v~~~~~D~~~~~~~~~~~  116 (248)
                      .++++||++|||||++| ||+++|++|+++|++|++++ |+.++.++..+++.+ ..  +.++.++.||++|.+++++++
T Consensus       647 ~m~L~gKvaLVTGASgGgIG~aIAr~LA~~GA~VVl~~~R~~~~l~~~a~eL~~el~~~G~~v~~v~~DVsd~esV~alv  726 (1878)
T 2uv9_A          647 GLTFQGKHALMTGAGAGSIGAEVLQGLLSGGAKVIVTTSRFSRQVTEYYQGIYARCGARGSQLVVVPFNQGSKQDVEALV  726 (1878)
T ss_dssp             CBCCTTCEEEEESCCTTSHHHHHHHHHHHTTCEEEEEESSCCHHHHHHHHHHHHHHCCTTCEEEEEECCTTCHHHHHHHH
T ss_pred             CCCCCCCEEEEECCCCcHHHHHHHHHHHHCCCEEEEEecCChHHHHHHHHHHHHHhhccCCeEEEEEcCCCCHHHHHHHH
Confidence            45789999999999998 99999999999999999985 666666666555532 22  347889999999999999999


Q ss_pred             HHHHhH---cC-CccEEEEccccCCcc-cccccCC--hHHHHHHHHhhhHHHHHHHHH--HhhhhhhcC-CeEEEEcCcc
Q 044010          117 EETMNH---FG-RLDHLVNNAGISSVA-LFEDIVN--ITDFKQIMNINFWGSVYTTRF--AVPHLRYTK-GKIVVLSSAA  186 (248)
Q Consensus       117 ~~~~~~---~g-~id~vv~~ag~~~~~-~~~~~~~--~~~~~~~~~~n~~~~~~l~~~--~~~~~~~~~-g~iV~isS~~  186 (248)
                      +++.++   +| ++|++|||||+.... ++.+ .+  .++|++.+++|+.+++.+++.  +.+.|.+++ |+||++||.+
T Consensus       727 ~~i~~~~~~~G~~IDiLVnNAGi~~~~~~l~d-~t~~~e~~~~vl~vNv~g~~~l~~a~~~lp~M~~~~~G~IVnISS~a  805 (1878)
T 2uv9_A          727 NYIYDTKNGLGWDLDYVVPFAAIPENGREIDS-IDSKSELAHRIMLTNLLRLLGAIKTQKKERGYETRPAQVILPLSPNH  805 (1878)
T ss_dssp             HHHHCSSSSCCCCCSEEEECCCCCCTTCCTTC-CCHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCCSCCEEECCEECSCS
T ss_pred             HHHHHhhcccCCCCcEEEeCcccccCCCChhh-cCcCHHHHHHHHHHHHHHHHHHHHHHHHhHHHHhCCCCEEEEEcchh
Confidence            999998   88 999999999987665 5555 45  799999999999999999977  677776554 8999999999


Q ss_pred             ccccCCCCccchHHHHHHHHHHHHHHH-HhCCCeEEEEEecCccc-cCcccc
Q 044010          187 SWLTAPRMSFYNASKAALVLFFETLRV-ELGSDVGVTIVTPGFIE-SELTQG  236 (248)
Q Consensus       187 ~~~~~~~~~~Y~~sKaal~~l~~~la~-~~~~~i~v~~v~pg~v~-T~~~~~  236 (248)
                      +..+  +...|++||+|+++|++.++. +++++|+||+|+||+++ |+|...
T Consensus       806 g~~g--g~~aYaASKAAL~aLt~~laAeEla~~IrVNaVaPG~V~gT~m~~~  855 (1878)
T 2uv9_A          806 GTFG--NDGLYSESKLALETLFNRWYSESWGNYLTICGAVIGWTRGTGLMSA  855 (1878)
T ss_dssp             SSSS--CCSSHHHHHHHHTTHHHHHHHSTTTTTEEEEEEEECCBCCTTSCSH
T ss_pred             hccC--CchHHHHHHHHHHHHHHHHHHHHcCCCeEEEEEEecceecCccccc
Confidence            8877  477999999999999887654 57767999999999999 998754

>3mje_A AMPHB; rossmann fold, oxidoreductase; HET: NDP; 1.36A {Streptomyces nodosus} PDB: 3mjc_A* 3mjs_A* 3mjv_A* 3mjt_A*

Probab=99.96  E-value=2.2e-28  Score=222.42  Aligned_cols=178  Identities=21%  Similarity=0.256  Sum_probs=154.9

Q ss_pred             CCEEEEcCCCChHHHHHHHHHHHcCC-eEEEEeCCc---chHHHHHHHHHhhCCCcEEEEEccCCCHHHHHHHHHHHHhH
Q 044010           47 GKVVIITGASSGIGEHLAYEYARRGA-CLALCARRE---KSLEEVADTAREIGSPDVITIRADVSKVDDCRSLVEETMNH  122 (248)
Q Consensus        47 ~k~~lVtGg~~gIG~aia~~l~~~G~-~V~l~~r~~---~~~~~~~~~l~~~~~~~v~~~~~D~~~~~~~~~~~~~~~~~  122 (248)
                      +|++|||||++|||.++|++|+++|+ +|++++|+.   +..++..+++++.+. ++.++.||++|.++++++++++.++
T Consensus       239 ~~~vLITGgsgGIG~alA~~La~~Ga~~vvl~~R~~~~~~~~~~l~~~l~~~g~-~v~~~~~Dvtd~~~v~~~~~~i~~~  317 (496)
T 3mje_A          239 HGSVLVTGGTGGIGGRVARRLAEQGAAHLVLTSRRGADAPGAAELRAELEQLGV-RVTIAACDAADREALAALLAELPED  317 (496)
T ss_dssp             CSEEEEETCSSHHHHHHHHHHHHTTCSEEEEEESSGGGSTTHHHHHHHHHHTTC-EEEEEECCTTCHHHHHHHHHTCCTT
T ss_pred             CCEEEEECCCCchHHHHHHHHHHCCCcEEEEEeCCCCChHHHHHHHHHHHhcCC-eEEEEEccCCCHHHHHHHHHHHHHh
Confidence            48999999999999999999999999 899999964   446667777777664 8999999999999999999998777


Q ss_pred             cCCccEEEEccccC-CcccccccCChHHHHHHHHhhhHHHHHHHHHHhhhhhhcCCeEEEEcCccccccCCCCccchHHH
Q 044010          123 FGRLDHLVNNAGIS-SVALFEDIVNITDFKQIMNINFWGSVYTTRFAVPHLRYTKGKIVVLSSAASWLTAPRMSFYNASK  201 (248)
Q Consensus       123 ~g~id~vv~~ag~~-~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~g~iV~isS~~~~~~~~~~~~Y~~sK  201 (248)
                       +++|++|||||+. ....+.+ .+.++|++.+++|+.+++++.+.+.+.   ..++||++||.++..+.+++..|++||
T Consensus       318 -g~ld~vVh~AGv~~~~~~l~~-~t~e~~~~vl~~nv~g~~~L~~~~~~~---~~~~iV~~SS~a~~~g~~g~~~YaAaK  392 (496)
T 3mje_A          318 -APLTAVFHSAGVAHDDAPVAD-LTLGQLDALMRAKLTAARHLHELTADL---DLDAFVLFSSGAAVWGSGGQPGYAAAN  392 (496)
T ss_dssp             -SCEEEEEECCCCCCSCCCTTT-CCHHHHHHHHHTTHHHHHHHHHHHTTS---CCSEEEEEEEHHHHTTCTTCHHHHHHH
T ss_pred             -CCCeEEEECCcccCCCCCccc-CCHHHHHHHHHHHHHHHHHHHHHhhcc---CCCEEEEEeChHhcCCCCCcHHHHHHH
Confidence             7999999999987 5555555 578999999999999999999988765   347999999999999999999999999


Q ss_pred             HHHHHHHHHHHHHhCCCeEEEEEecCccccCc
Q 044010          202 AALVLFFETLRVELGSDVGVTIVTPGFIESEL  233 (248)
Q Consensus       202 aal~~l~~~la~~~~~~i~v~~v~pg~v~T~~  233 (248)
                      +++++|++.++..   ++++++|+||++.|+.
T Consensus       393 a~ldala~~~~~~---Gi~v~sV~pG~w~~~g  421 (496)
T 3mje_A          393 AYLDALAEHRRSL---GLTASSVAWGTWGEVG  421 (496)
T ss_dssp             HHHHHHHHHHHHT---TCCCEEEEECEESSSC
T ss_pred             HHHHHHHHHHHhc---CCeEEEEECCcccCCc
Confidence            9999999876532   5999999999986643

>3slk_A Polyketide synthase extender module 2; rossmann fold, NADPH, oxidoreductase; HET: NDP; 3.00A {Saccharopolyspora spinosa}

Probab=99.96  E-value=1.3e-28  Score=235.50  Aligned_cols=179  Identities=18%  Similarity=0.260  Sum_probs=156.2

Q ss_pred             CCCEEEEcCCCChHHHHHHHHHH-HcCC-eEEEEeCC---cchHHHHHHHHHhhCCCcEEEEEccCCCHHHHHHHHHHHH
Q 044010           46 SGKVVIITGASSGIGEHLAYEYA-RRGA-CLALCARR---EKSLEEVADTAREIGSPDVITIRADVSKVDDCRSLVEETM  120 (248)
Q Consensus        46 ~~k~~lVtGg~~gIG~aia~~l~-~~G~-~V~l~~r~---~~~~~~~~~~l~~~~~~~v~~~~~D~~~~~~~~~~~~~~~  120 (248)
                      ++|++|||||++|||+++|++|+ ++|+ +|++++|+   .++.++..+++++.+. ++.++.||++|.++++++++++.
T Consensus       529 ~~~~~lItGg~~GlG~aiA~~la~~~Ga~~vvl~~R~~~~~~~~~~~~~~l~~~G~-~v~~~~~Dvsd~~~v~~~~~~~~  607 (795)
T 3slk_A          529 AAGTVLVTGGTGALGAEVARHLVIERGVRNLVLVSRRGPAASGAAELVAQLTAYGA-EVSLQACDVADRETLAKVLASIP  607 (795)
T ss_dssp             TTSEEEEETTTSHHHHHHHHHHHHTSSCCEEEEEESSGGGSTTHHHHHHHHHHTTC-EEEEEECCTTCHHHHHHHHHTSC
T ss_pred             cccceeeccCCCCcHHHHHHHHHHHcCCcEEEEeccCccchHHHHHHHHHHHhcCC-cEEEEEeecCCHHHHHHHHHHHH
Confidence            58999999999999999999999 7999 69999998   4566777788877654 89999999999999999999998


Q ss_pred             hHcCCccEEEEccccCCcccccccCChHHHHHHHHhhhHHHHHHHHHHhhhhhhcCCeEEEEcCccccccCCCCccchHH
Q 044010          121 NHFGRLDHLVNNAGISSVALFEDIVNITDFKQIMNINFWGSVYTTRFAVPHLRYTKGKIVVLSSAASWLTAPRMSFYNAS  200 (248)
Q Consensus       121 ~~~g~id~vv~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~g~iV~isS~~~~~~~~~~~~Y~~s  200 (248)
                      +++ ++|++|||||+.....+.+ .+.++|++.+++|+.|++++.+.+.|.|     +||++||.++..+.+++++|++|
T Consensus       608 ~~~-~id~lVnnAGv~~~~~~~~-~t~e~~~~~~~~nv~G~~~l~~~~~~~l-----~iV~~SS~ag~~g~~g~~~YaAa  680 (795)
T 3slk_A          608 DEH-PLTAVVHAAGVLDDGVSES-LTVERLDQVLRPKVDGARNLLELIDPDV-----ALVLFSSVSGVLGSGGQGNYAAA  680 (795)
T ss_dssp             TTS-CEEEEEECCCCCCCCCGGG-CCHHHHHHHHCCCCCHHHHHHHHSCTTS-----EEEEEEETHHHHTCSSCHHHHHH
T ss_pred             HhC-CCEEEEECCCcCCCCchhh-CCHHHHHHHHHHHHHHHHHHHHHHhhCC-----EEEEEccHHhcCCCCCCHHHHHH
Confidence            776 9999999999987776666 5789999999999999999999998877     79999999999999999999999


Q ss_pred             HHHHHHHHHHHHHHhCCCeEEEEEecCccccCccc
Q 044010          201 KAALVLFFETLRVELGSDVGVTIVTPGFIESELTQ  235 (248)
Q Consensus       201 Kaal~~l~~~la~~~~~~i~v~~v~pg~v~T~~~~  235 (248)
                      |+.+++|++.++..   +|++|+|+||++.|++..
T Consensus       681 ka~~~alA~~~~~~---Gi~v~sI~pG~v~t~g~~  712 (795)
T 3slk_A          681 NSFLDALAQQRQSR---GLPTRSLAWGPWAEHGMA  712 (795)
T ss_dssp             HHHHHHHHHHHHHT---TCCEEEEEECCCSCCCHH
T ss_pred             HHHHHHHHHHHHHc---CCeEEEEECCeECcchhh
Confidence            97555555444322   599999999999998644

>3zen_D Fatty acid synthase; transferase, mycolic acid biosynthesis, multifunctional ENZY substrate channeling; HET: FMN; 7.50A {Mycobacterium smegmatis} PDB: 4b3y_A*

Probab=99.95  E-value=1.1e-27  Score=250.11  Aligned_cols=190  Identities=15%  Similarity=0.153  Sum_probs=150.6

Q ss_pred             cCCCCCEEEEcCCCCh-HHHHHHHHHHHcCCeEEEEeCCcch-----HHHHHHHHHhhCCCcEEEEEccCCCHHHHHHHH
Q 044010           43 EDVSGKVVIITGASSG-IGEHLAYEYARRGACLALCARREKS-----LEEVADTAREIGSPDVITIRADVSKVDDCRSLV  116 (248)
Q Consensus        43 ~~~~~k~~lVtGg~~g-IG~aia~~l~~~G~~V~l~~r~~~~-----~~~~~~~l~~~~~~~v~~~~~D~~~~~~~~~~~  116 (248)
                      ..++||++|||||++| ||+++|++|+++|++|++++|+.++     +++..+++...+ .++..+.+|++|.+++++++
T Consensus      2132 ~~l~gKvaLVTGAs~GsIG~AiA~~La~~GA~Vvi~~r~~~~~~~~~~~~l~~~l~~~G-~~~~~v~~Dvtd~~~v~~lv 2210 (3089)
T 3zen_D         2132 XXXXDEVAVVTGASKGSIAASVVGQLLDGGATVIATTSRLDDDRLAFYKQLYRDHARFD-ATLWVVPANMASYSDIDKLV 2210 (3089)
T ss_dssp             CCCCCCEEEEESCCTTSHHHHHHHHHHHTTCEEEEEESCCSHHHHHHHHHHHHHHCCTT-CEEEEEECCTTCHHHHHHHH
T ss_pred             ccCCCCEEEEeCCChhHHHHHHHHHHHHCCCEEEEEeCChhhhhhHHHHHHHHHHhhcC-CeEEEEEecCCCHHHHHHHH
Confidence            3589999999999999 9999999999999999999998876     555555554443 37889999999999999999


Q ss_pred             HHHHh----HcCCccEEEEccccC----CcccccccCChHH----HHHHHHhhhHHHHHHHHHHhhhhhhcC-C----eE
Q 044010          117 EETMN----HFGRLDHLVNNAGIS----SVALFEDIVNITD----FKQIMNINFWGSVYTTRFAVPHLRYTK-G----KI  179 (248)
Q Consensus       117 ~~~~~----~~g~id~vv~~ag~~----~~~~~~~~~~~~~----~~~~~~~n~~~~~~l~~~~~~~~~~~~-g----~i  179 (248)
                      +++.+    ++|++|++|||||..    .........+.++    ++..+++|+.+++.+++.+.+.|.+.+ +    .+
T Consensus      2211 ~~i~~~~~~~fG~IDILVNNAGi~d~~~~~a~~~~~~~~e~~~~~~e~~~~vnl~~~~~l~~~~~~~m~~~~~g~~~~ii 2290 (3089)
T 3zen_D         2211 EWVGTEQTESLGPQSIHLKDAQTPTLLFPFAAPRVAGDMSEVGSRAEMEMKVLLWAVQRLISGLSKIGAERDIASRLHVV 2290 (3089)
T ss_dssp             HHHTSCCEEEESSSEEEECCCCCCSEEEECCCCCCCCTTSCTTSHHHHHHHHHTHHHHHHHHHHHHHHHHTTCCCCEEEE
T ss_pred             HHHHhhhhhhcCCCCEEEECCCcccccCcccccccCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCCceeEEE
Confidence            99998    899999999999972    1111111112333    445599999999999999999987543 1    23


Q ss_pred             EEEcCccccccCCCCccchHHHHHHHHHHHHHHHH--hCCCeEEEEEecCccc-cCccc
Q 044010          180 VVLSSAASWLTAPRMSFYNASKAALVLFFETLRVE--LGSDVGVTIVTPGFIE-SELTQ  235 (248)
Q Consensus       180 V~isS~~~~~~~~~~~~Y~~sKaal~~l~~~la~~--~~~~i~v~~v~pg~v~-T~~~~  235 (248)
                      ++.|+..+.  .++..+|++||+|+++|+++|+.|  ++++|+||+|+||+|+ |++..
T Consensus      2291 ~~~ss~~g~--~g~~~aYsASKaAl~~LtrslA~E~~~a~~IrVn~v~PG~v~tT~l~~ 2347 (3089)
T 3zen_D         2291 LPGSPNRGM--FGGDGAYGEAKSALDALENRWSAEKSWAERVSLAHALIGWTKGTGLMG 2347 (3089)
T ss_dssp             EEECSSTTS--CSSCSSHHHHGGGHHHHHHHHHHCSTTTTTEEEEEEECCCEECSTTTT
T ss_pred             EECCccccc--CCCchHHHHHHHHHHHHHHHHHhccccCCCeEEEEEeecccCCCcccc
Confidence            333433332  235568999999999999999999  8878999999999999 77654

>2dkn_A 3-alpha-hydroxysteroid dehydrogenase; oxidoreductase, rossmann fold; HET: NAI; 1.80A {Pseudomonas SP}

Probab=99.95  E-value=3.5e-28  Score=202.38  Aligned_cols=165  Identities=24%  Similarity=0.303  Sum_probs=141.0

Q ss_pred             CEEEEcCCCChHHHHHHHHHHHcCCeEEEEeCCcchHHHHHHHHHhhCCCcEEEEEccCCCHHHHHHHHHHHHhHcCCcc
Q 044010           48 KVVIITGASSGIGEHLAYEYARRGACLALCARREKSLEEVADTAREIGSPDVITIRADVSKVDDCRSLVEETMNHFGRLD  127 (248)
Q Consensus        48 k~~lVtGg~~gIG~aia~~l~~~G~~V~l~~r~~~~~~~~~~~l~~~~~~~v~~~~~D~~~~~~~~~~~~~~~~~~g~id  127 (248)
                      |++|||||+||||++++++|+++|++|++++|+.++.+.              .+.+|+++.++++++++++   .+++|
T Consensus         2 k~vlVtGasg~iG~~l~~~L~~~g~~V~~~~r~~~~~~~--------------~~~~D~~~~~~~~~~~~~~---~~~~d   64 (255)
T 2dkn_A            2 SVIAITGSASGIGAALKELLARAGHTVIGIDRGQADIEA--------------DLSTPGGRETAVAAVLDRC---GGVLD   64 (255)
T ss_dssp             CEEEEETTTSHHHHHHHHHHHHTTCEEEEEESSSSSEEC--------------CTTSHHHHHHHHHHHHHHH---TTCCS
T ss_pred             cEEEEeCCCcHHHHHHHHHHHhCCCEEEEEeCChhHccc--------------cccCCcccHHHHHHHHHHc---CCCcc
Confidence            589999999999999999999999999999998764321              1678999999999888754   36899


Q ss_pred             EEEEccccCCcccccccCChHHHHHHHHhhhHHHHHHHHHHhhhhhhcC-CeEEEEcCccccccC---------------
Q 044010          128 HLVNNAGISSVALFEDIVNITDFKQIMNINFWGSVYTTRFAVPHLRYTK-GKIVVLSSAASWLTA---------------  191 (248)
Q Consensus       128 ~vv~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~-g~iV~isS~~~~~~~---------------  191 (248)
                      ++|||||....        .+++++.+++|+.+++++++.+.+.|++.+ +++|++||..++.+.               
T Consensus        65 ~vi~~Ag~~~~--------~~~~~~~~~~N~~~~~~l~~~~~~~~~~~~~~~iv~~sS~~~~~~~~~~~~~~~~~~~~~~  136 (255)
T 2dkn_A           65 GLVCCAGVGVT--------AANSGLVVAVNYFGVSALLDGLAEALSRGQQPAAVIVGSIAATQPGAAELPMVEAMLAGDE  136 (255)
T ss_dssp             EEEECCCCCTT--------SSCHHHHHHHHTHHHHHHHHHHHHHHHTSSSCEEEEECCGGGGSTTGGGCHHHHHHHHTCH
T ss_pred             EEEECCCCCCc--------chhHHHHHHHHhHHHHHHHHHHHHHhhhcCCceEEEEeccccccccccccchhhhhcccch
Confidence            99999997542        134788999999999999999999987654 899999999887654               


Q ss_pred             -----------CCCccchHHHHHHHHHHHHHHHHhCC-CeEEEEEecCccccCccccc
Q 044010          192 -----------PRMSFYNASKAALVLFFETLRVELGS-DVGVTIVTPGFIESELTQGK  237 (248)
Q Consensus       192 -----------~~~~~Y~~sKaal~~l~~~la~~~~~-~i~v~~v~pg~v~T~~~~~~  237 (248)
                                 ++...|++||++++.+++.++.++++ ++++++++||.+.|++....
T Consensus       137 ~~~~~~~~~~~~~~~~Y~~sK~a~~~~~~~~~~~~~~~gi~v~~v~pg~v~~~~~~~~  194 (255)
T 2dkn_A          137 ARAIELAEQQGQTHLAYAGSKYAVTCLARRNVVDWAGRGVRLNVVAPGAVETPLLQAS  194 (255)
T ss_dssp             HHHHHHHHHHCCHHHHHHHHHHHHHHHHHHTHHHHHHTTCEEEEEEECCBCSHHHHHH
T ss_pred             hhhhhhccccCCcchhHHHHHHHHHHHHHHHHHHHhhcCcEEEEEcCCcccchhhhhc
Confidence                       45668999999999999999999865 59999999999999987654

>2fr1_A Erythromycin synthase, eryai; short chain dehydrogenase/reductase, oxidoreductase; HET: NDP; 1.79A {Saccharopolyspora erythraea} SCOP: c.2.1.2 c.2.1.2 PDB: 2fr0_A*

Probab=99.95  E-value=8.4e-27  Score=212.16  Aligned_cols=181  Identities=20%  Similarity=0.244  Sum_probs=153.3

Q ss_pred             CCCEEEEcCCCChHHHHHHHHHHHcCC-eEEEEeCCcc---hHHHHHHHHHhhCCCcEEEEEccCCCHHHHHHHHHHHHh
Q 044010           46 SGKVVIITGASSGIGEHLAYEYARRGA-CLALCARREK---SLEEVADTAREIGSPDVITIRADVSKVDDCRSLVEETMN  121 (248)
Q Consensus        46 ~~k~~lVtGg~~gIG~aia~~l~~~G~-~V~l~~r~~~---~~~~~~~~l~~~~~~~v~~~~~D~~~~~~~~~~~~~~~~  121 (248)
                      +++++|||||+||||.+++++|+++|+ +|++++|+..   ..++..+++++.+. ++.++.||++|.++++++++++ +
T Consensus       225 ~~~~vLITGgtGgIG~~la~~La~~G~~~vvl~~R~~~~~~~~~~l~~~l~~~g~-~v~~~~~Dv~d~~~v~~~~~~i-~  302 (486)
T 2fr1_A          225 PTGTVLVTGGTGGVGGQIARWLARRGAPHLLLVSRSGPDADGAGELVAELEALGA-RTTVAACDVTDRESVRELLGGI-G  302 (486)
T ss_dssp             CCSEEEEETTTSHHHHHHHHHHHHHTCSEEEEEESSGGGSTTHHHHHHHHHHTTC-EEEEEECCTTCHHHHHHHHHTS-C
T ss_pred             CCCEEEEECCCCHHHHHHHHHHHHcCCCEEEEEcCCCCCcHHHHHHHHHHHhcCC-EEEEEEeCCCCHHHHHHHHHHH-H
Confidence            578999999999999999999999999 5999999864   45666667766554 7899999999999999999998 6


Q ss_pred             HcCCccEEEEccccCCcccccccCChHHHHHHHHhhhHHHHHHHHHHhhhhhhcCCeEEEEcCccccccCCCCccchHHH
Q 044010          122 HFGRLDHLVNNAGISSVALFEDIVNITDFKQIMNINFWGSVYTTRFAVPHLRYTKGKIVVLSSAASWLTAPRMSFYNASK  201 (248)
Q Consensus       122 ~~g~id~vv~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~g~iV~isS~~~~~~~~~~~~Y~~sK  201 (248)
                      +++++|++|||||......+.+ .+.+++++.+++|+.+++++.+.+.+.   ..++||++||.++..+.++...|+++|
T Consensus       303 ~~g~ld~VIh~AG~~~~~~l~~-~~~~~~~~~~~~nv~g~~~L~~~~~~~---~~~~~V~~SS~a~~~g~~g~~~Yaaak  378 (486)
T 2fr1_A          303 DDVPLSAVFHAAATLDDGTVDT-LTGERIERASRAKVLGARNLHELTREL---DLTAFVLFSSFASAFGAPGLGGYAPGN  378 (486)
T ss_dssp             TTSCEEEEEECCCCCCCCCGGG-CCHHHHHHHTHHHHHHHHHHHHHHTTS---CCSEEEEEEEHHHHTCCTTCTTTHHHH
T ss_pred             hcCCCcEEEECCccCCCCcccc-CCHHHHHHHHHHHHHHHHHHHHHhCcC---CCCEEEEEcChHhcCCCCCCHHHHHHH
Confidence            6789999999999887665555 578999999999999999999987543   458999999999999999999999999


Q ss_pred             HHHHHHHHHHHHHhCCCeEEEEEecCccccC-ccc
Q 044010          202 AALVLFFETLRVELGSDVGVTIVTPGFIESE-LTQ  235 (248)
Q Consensus       202 aal~~l~~~la~~~~~~i~v~~v~pg~v~T~-~~~  235 (248)
                      +++++|++.++.+   ++++++|+||++.|+ |..
T Consensus       379 a~l~~la~~~~~~---gi~v~~i~pG~~~~~gm~~  410 (486)
T 2fr1_A          379 AYLDGLAQQRRSD---GLPATAVAWGTWAGSGMAE  410 (486)
T ss_dssp             HHHHHHHHHHHHT---TCCCEEEEECCBC------
T ss_pred             HHHHHHHHHHHhc---CCeEEEEECCeeCCCcccc
Confidence            9999998766532   599999999999886 554

>2z5l_A Tylkr1, tylactone synthase starter module and modules 1 & 2; short-chain dehydrogenase/reductase, rossman fold; 1.95A {Streptomyces fradiae}

Probab=99.95  E-value=3.6e-26  Score=208.98  Aligned_cols=179  Identities=25%  Similarity=0.316  Sum_probs=154.1

Q ss_pred             CCCEEEEcCCCChHHHHHHHHHHHcCC-eEEEEeCCcc---hHHHHHHHHHhhCCCcEEEEEccCCCHHHHHHHHHHHHh
Q 044010           46 SGKVVIITGASSGIGEHLAYEYARRGA-CLALCARREK---SLEEVADTAREIGSPDVITIRADVSKVDDCRSLVEETMN  121 (248)
Q Consensus        46 ~~k~~lVtGg~~gIG~aia~~l~~~G~-~V~l~~r~~~---~~~~~~~~l~~~~~~~v~~~~~D~~~~~~~~~~~~~~~~  121 (248)
                      ++|++|||||+||||.+++++|+++|+ +|++++|+..   ..++..+++++.+ .++.++.||++|.+++++++++   
T Consensus       258 ~~~~vLITGgtGgIG~~lA~~La~~G~~~vvl~~R~~~~~~~~~~l~~~l~~~g-~~v~~~~~Dvtd~~~v~~~~~~---  333 (511)
T 2z5l_A          258 PSGTVLITGGMGAIGRRLARRLAAEGAERLVLTSRRGPEAPGAAELAEELRGHG-CEVVHAACDVAERDALAALVTA---  333 (511)
T ss_dssp             CCSEEEEETTTSHHHHHHHHHHHHTTCSEEEEEESSGGGSTTHHHHHHHHHTTT-CEEEEEECCSSCHHHHHHHHHH---
T ss_pred             CCCEEEEECCCCHHHHHHHHHHHhCCCcEEEEEecCCcccHHHHHHHHHHHhcC-CEEEEEEeCCCCHHHHHHHHhc---
Confidence            578999999999999999999999999 6999999863   4566667776654 4799999999999999999886   


Q ss_pred             HcCCccEEEEccccCCcccccccCChHHHHHHHHhhhHHHHHHHHHHhhhhhhcCCeEEEEcCccccccCCCCccchHHH
Q 044010          122 HFGRLDHLVNNAGISSVALFEDIVNITDFKQIMNINFWGSVYTTRFAVPHLRYTKGKIVVLSSAASWLTAPRMSFYNASK  201 (248)
Q Consensus       122 ~~g~id~vv~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~g~iV~isS~~~~~~~~~~~~Y~~sK  201 (248)
                        +++|+||||||......+.+ .+.+++++.+++|+.+++++.+.+.+.  +..++||++||.++..+.++...|+++|
T Consensus       334 --~~ld~VVh~AGv~~~~~~~~-~~~~~~~~~~~~nv~g~~~L~~~~~~~--~~~~~~V~~SS~a~~~g~~g~~~YaaaK  408 (511)
T 2z5l_A          334 --YPPNAVFHTAGILDDAVIDT-LSPESFETVRGAKVCGAELLHQLTADI--KGLDAFVLFSSVTGTWGNAGQGAYAAAN  408 (511)
T ss_dssp             --SCCSEEEECCCCCCCBCGGG-CCHHHHHHHHHHHHHHHHHHHHHTSSC--TTCCCEEEEEEGGGTTCCTTBHHHHHHH
T ss_pred             --CCCcEEEECCcccCCccccc-CCHHHHHHHHHHHHHHHHHHHHHHhhc--cCCCEEEEEeCHHhcCCCCCCHHHHHHH
Confidence              68999999999887666555 478999999999999999999886543  1347999999999999999999999999


Q ss_pred             HHHHHHHHHHHHHhCCCeEEEEEecCcc-ccCcccc
Q 044010          202 AALVLFFETLRVELGSDVGVTIVTPGFI-ESELTQG  236 (248)
Q Consensus       202 aal~~l~~~la~~~~~~i~v~~v~pg~v-~T~~~~~  236 (248)
                      ++++.+++.++.   .++++++|+||++ +|+|...
T Consensus       409 a~ld~la~~~~~---~gi~v~sv~pG~~~~tgm~~~  441 (511)
T 2z5l_A          409 AALDALAERRRA---AGLPATSVAWGLWGGGGMAAG  441 (511)
T ss_dssp             HHHHHHHHHHHT---TTCCCEEEEECCBCSTTCCCC
T ss_pred             HHHHHHHHHHHH---cCCcEEEEECCcccCCccccc
Confidence            999999987642   3599999999999 8998765

>3rft_A Uronate dehydrogenase; apoenzyme, rossmann fold, NAD binding, oxidoreductase; 1.90A {Agrobacterium tumefaciens} PDB: 3rfv_A* 3rfx_A*

Probab=99.93  E-value=9.9e-26  Score=189.87  Aligned_cols=159  Identities=21%  Similarity=0.214  Sum_probs=131.2

Q ss_pred             CCCCEEEEcCCCChHHHHHHHHHHHcCCeEEEEeCCcchHHHHHHHHHhhCCCcEEEEEccCCCHHHHHHHHHHHHhHcC
Q 044010           45 VSGKVVIITGASSGIGEHLAYEYARRGACLALCARREKSLEEVADTAREIGSPDVITIRADVSKVDDCRSLVEETMNHFG  124 (248)
Q Consensus        45 ~~~k~~lVtGg~~gIG~aia~~l~~~G~~V~l~~r~~~~~~~~~~~l~~~~~~~v~~~~~D~~~~~~~~~~~~~~~~~~g  124 (248)
                      |++|++|||||+||||++++++|+++|++|++++|+..+.+          ..++.++.+|++|.++++++++       
T Consensus         1 m~~k~vlVTGasg~IG~~la~~L~~~G~~V~~~~r~~~~~~----------~~~~~~~~~Dl~d~~~~~~~~~-------   63 (267)
T 3rft_A            1 MAMKRLLVTGAAGQLGRVMRERLAPMAEILRLADLSPLDPA----------GPNEECVQCDLADANAVNAMVA-------   63 (267)
T ss_dssp             CCEEEEEEESTTSHHHHHHHHHTGGGEEEEEEEESSCCCCC----------CTTEEEEECCTTCHHHHHHHHT-------
T ss_pred             CCCCEEEEECCCCHHHHHHHHHHHhcCCEEEEEecCCcccc----------CCCCEEEEcCCCCHHHHHHHHc-------
Confidence            45789999999999999999999999999999999876533          2378999999999999988876       


Q ss_pred             CccEEEEccccCCcccccccCChHHHHHHHHhhhHHHHHHHHHHhhhhhhcCCeEEEEcCccccc------------cCC
Q 044010          125 RLDHLVNNAGISSVALFEDIVNITDFKQIMNINFWGSVYTTRFAVPHLRYTKGKIVVLSSAASWL------------TAP  192 (248)
Q Consensus       125 ~id~vv~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~g~iV~isS~~~~~------------~~~  192 (248)
                      ++|++|||||...         .++|++.+++|+.+++++++++.+   ...++||++||..++.            +.+
T Consensus        64 ~~D~vi~~Ag~~~---------~~~~~~~~~~N~~g~~~l~~a~~~---~~~~~iv~~SS~~~~g~~~~~~~~~e~~~~~  131 (267)
T 3rft_A           64 GCDGIVHLGGISV---------EKPFEQILQGNIIGLYNLYEAARA---HGQPRIVFASSNHTIGYYPQTERLGPDVPAR  131 (267)
T ss_dssp             TCSEEEECCSCCS---------CCCHHHHHHHHTHHHHHHHHHHHH---TTCCEEEEEEEGGGGTTSBTTSCBCTTSCCC
T ss_pred             CCCEEEECCCCcC---------cCCHHHHHHHHHHHHHHHHHHHHH---cCCCEEEEEcchHHhCCCCCCCCCCCCCCCC
Confidence            6999999999831         245788999999999999999843   2457999999988772            334


Q ss_pred             CCccchHHHHHHHHHHHHHHHHhCCCeEEEEEecCccccCcc
Q 044010          193 RMSFYNASKAALVLFFETLRVELGSDVGVTIVTPGFIESELT  234 (248)
Q Consensus       193 ~~~~Y~~sKaal~~l~~~la~~~~~~i~v~~v~pg~v~T~~~  234 (248)
                      +...|+.||++.+.+++.++.+++  +++++|.||.+.+++.
T Consensus       132 ~~~~Y~~sK~~~e~~~~~~a~~~g--~~~~~vr~~~v~~~~~  171 (267)
T 3rft_A          132 PDGLYGVSKCFGENLARMYFDKFG--QETALVRIGSCTPEPN  171 (267)
T ss_dssp             CCSHHHHHHHHHHHHHHHHHHHHC--CCEEEEEECBCSSSCC
T ss_pred             CCChHHHHHHHHHHHHHHHHHHhC--CeEEEEEeecccCCCC
Confidence            557899999999999999999985  5666666666655543

>4ggo_A Trans-2-enoyl-COA reductase; rossmann fold, oxidoreductase; 2.00A {Treponema denticola atcc 35405} PDB: 4ggp_A

Probab=99.92  E-value=1.2e-23  Score=183.09  Aligned_cols=193  Identities=16%  Similarity=0.046  Sum_probs=154.0

Q ss_pred             cCCCCCEEEEcCCCChHHHHHHHHHH-HcCCeEEEEeCCcch------------HHHHHHHHHhhCCCcEEEEEccCCCH
Q 044010           43 EDVSGKVVIITGASSGIGEHLAYEYA-RRGACLALCARREKS------------LEEVADTAREIGSPDVITIRADVSKV  109 (248)
Q Consensus        43 ~~~~~k~~lVtGg~~gIG~aia~~l~-~~G~~V~l~~r~~~~------------~~~~~~~l~~~~~~~v~~~~~D~~~~  109 (248)
                      ....+|++|||||++|||++++..|+ ..|++++++++..+.            .+...+++++.+. +...+.||+++.
T Consensus        46 ~~~~pK~vLVtGaSsGiGlA~AialAf~~GA~vi~v~~~~~~~~~~~atag~~~~~a~~~~i~~~G~-~a~~i~~Dv~d~  124 (401)
T 4ggo_A           46 GAKAPKNVLVLGCSNGYGLASRITAAFGYGAATIGVSFEKAGSETKYGTPGWYNNLAFDEAAKREGL-YSVTIDGDAFSD  124 (401)
T ss_dssp             TSCCCCEEEEESCSSHHHHHHHHHHHHHHCCEEEEEECCCCCCSSSCCCHHHHHHHHHHHHHHHHTC-CEEEEESCTTSH
T ss_pred             ccCCCCEEEEECCCCcHHHHHHHHHHhhCCCCEEEEecCCcccccccccccchhHHHHHHHHHHcCC-CceeEeCCCCCH
Confidence            35678999999999999999999999 679999999886542            2344566777776 889999999999


Q ss_pred             HHHHHHHHHHHhHcCCccEEEEccccCCccccc---------------------------------ccCChHHHH---HH
Q 044010          110 DDCRSLVEETMNHFGRLDHLVNNAGISSVALFE---------------------------------DIVNITDFK---QI  153 (248)
Q Consensus       110 ~~~~~~~~~~~~~~g~id~vv~~ag~~~~~~~~---------------------------------~~~~~~~~~---~~  153 (248)
                      ++++++++++.+++|++|++||++|......+.                                 ++.+.++++   ..
T Consensus       125 e~i~~vi~~i~~~~G~IDiLVhS~A~~~r~~p~~g~~~~S~LKpi~~~~~~~~ldt~~~~i~~~~l~pat~eeie~T~~v  204 (401)
T 4ggo_A          125 EIKAQVIEEAKKKGIKFDLIVYSLASPVRTDPDTGIMHKSVLKPFGKTFTGKTVDPFTGELKEISAEPANDEEAAATVKV  204 (401)
T ss_dssp             HHHHHHHHHHHHTTCCEEEEEECCCCSEEECTTTCCEEECCCCCSSSCEEEEEECTTTCCEEEEEECCCCHHHHHHHHHH
T ss_pred             HHHHHHHHHHHHhcCCCCEEEEecccccccCCCCCceeeeeecccccccccccccccccccccccccCCcHHHHHHHHHH
Confidence            999999999999999999999999976421110                                 112334444   44


Q ss_pred             HHhhhHHHHHHHHHHhhhhhhcCCeEEEEcCccccccCC--CCccchHHHHHHHHHHHHHHHHhCCCeEEEEEecCcccc
Q 044010          154 MNINFWGSVYTTRFAVPHLRYTKGKIVVLSSAASWLTAP--RMSFYNASKAALVLFFETLRVELGSDVGVTIVTPGFIES  231 (248)
Q Consensus       154 ~~~n~~~~~~l~~~~~~~~~~~~g~iV~isS~~~~~~~~--~~~~Y~~sKaal~~l~~~la~~~~~~i~v~~v~pg~v~T  231 (248)
                      |.....+.|...+...+.|. .+++++.+|+..+...+|  ....+|++|++|++.++.|+.++++ +++|+++||++.|
T Consensus       205 Mg~s~~s~w~~al~~a~lla-~G~siva~SYiGse~t~P~Y~~G~mG~AKaaLEa~~r~La~eL~~-~~a~v~v~~a~vT  282 (401)
T 4ggo_A          205 MGGEDWERWIKQLSKEGLLE-EGCITLAYSYIGPEATQALYRKGTIGKAKEHLEATAHRLNKENPS-IRAFVSVNKGLVT  282 (401)
T ss_dssp             HSSHHHHHHHHHHHHTTCEE-EEEEEEEEECCCCGGGHHHHTTSHHHHHHHHHHHHHHHHHHHCTT-EEEEEEECCCCCC
T ss_pred             HhhhHHHHHHHHHHhhhccc-CCceEEEEeccCcceeecCCCccHHHHHHHHHHHHHHHHHHhcCC-CcEEEEEcCcccc
Confidence            55566677777777777775 678999999988765555  3458999999999999999999975 8999999999999


Q ss_pred             Ccccccc
Q 044010          232 ELTQGKF  238 (248)
Q Consensus       232 ~~~~~~~  238 (248)
                      +....++
T Consensus       283 ~AssaIP  289 (401)
T 4ggo_A          283 RASAVIP  289 (401)
T ss_dssp             TTGGGSS
T ss_pred             chhhcCC
Confidence            8776553

>1y1p_A ARII, aldehyde reductase II; rossmann fold, short chain dehydrogenase reductase, oxidoreductase; HET: NMN AMP; 1.60A {Sporidiobolus salmonicolor} SCOP: c.2.1.2 PDB: 1ujm_A* 1zze_A

Probab=99.91  E-value=7.6e-24  Score=183.18  Aligned_cols=178  Identities=18%  Similarity=0.187  Sum_probs=144.2

Q ss_pred             ccCCCCCEEEEcCCCChHHHHHHHHHHHcCCeEEEEeCCcchHHHHHHHHHhhCCCcEEEE-EccCCCHHHHHHHHHHHH
Q 044010           42 SEDVSGKVVIITGASSGIGEHLAYEYARRGACLALCARREKSLEEVADTAREIGSPDVITI-RADVSKVDDCRSLVEETM  120 (248)
Q Consensus        42 ~~~~~~k~~lVtGg~~gIG~aia~~l~~~G~~V~l~~r~~~~~~~~~~~l~~~~~~~v~~~-~~D~~~~~~~~~~~~~~~  120 (248)
                      +..+++|++|||||+|+||.+++++|+++|++|++++|+.++.+...+.+....+.++.++ .+|++|.++++++++   
T Consensus         6 ~~~~~~~~vlVTGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~D~~d~~~~~~~~~---   82 (342)
T 1y1p_A            6 AVLPEGSLVLVTGANGFVASHVVEQLLEHGYKVRGTARSASKLANLQKRWDAKYPGRFETAVVEDMLKQGAYDEVIK---   82 (342)
T ss_dssp             CSSCTTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESSHHHHHHHHHHHHHHSTTTEEEEECSCTTSTTTTTTTTT---
T ss_pred             ccCCCCCEEEEECCccHHHHHHHHHHHHCCCEEEEEeCCcccHHHHHHHhhccCCCceEEEEecCCcChHHHHHHHc---
Confidence            3457899999999999999999999999999999999988776666555544333478888 899999988877654   


Q ss_pred             hHcCCccEEEEccccCCcccccccCChHHHHHHHHhhhHHHHHHHHHHhhhhhhcCCeEEEEcCccccc-cCC-------
Q 044010          121 NHFGRLDHLVNNAGISSVALFEDIVNITDFKQIMNINFWGSVYTTRFAVPHLRYTKGKIVVLSSAASWL-TAP-------  192 (248)
Q Consensus       121 ~~~g~id~vv~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~g~iV~isS~~~~~-~~~-------  192 (248)
                          ++|+|||+||.....        +++++.+++|+.++.++++++.+.  ...+++|++||.+++. +.+       
T Consensus        83 ----~~d~vih~A~~~~~~--------~~~~~~~~~n~~g~~~ll~~~~~~--~~~~~iv~~SS~~~~~~~~~~~~~~~~  148 (342)
T 1y1p_A           83 ----GAAGVAHIASVVSFS--------NKYDEVVTPAIGGTLNALRAAAAT--PSVKRFVLTSSTVSALIPKPNVEGIYL  148 (342)
T ss_dssp             ----TCSEEEECCCCCSCC--------SCHHHHHHHHHHHHHHHHHHHHTC--TTCCEEEEECCGGGTCCCCTTCCCCEE
T ss_pred             ----CCCEEEEeCCCCCCC--------CCHHHHHHHHHHHHHHHHHHHHhC--CCCcEEEEeccHHHhcCCCCCCCCccc
Confidence                699999999976432        235678999999999999998752  1347999999987753 211       


Q ss_pred             -----------------------CCccchHHHHHHHHHHHHHHHHhCCCeEEEEEecCccccCcccc
Q 044010          193 -----------------------RMSFYNASKAALVLFFETLRVELGSDVGVTIVTPGFIESELTQG  236 (248)
Q Consensus       193 -----------------------~~~~Y~~sKaal~~l~~~la~~~~~~i~v~~v~pg~v~T~~~~~  236 (248)
                                             +...|+.||.+.+.+++.++.+++++++++++.||.+.++....
T Consensus       149 ~E~~~~~~~~~~~~~~~~~~~~~~~~~Y~~sK~~~e~~~~~~~~~~~~~~~~~~~rp~~v~g~~~~~  215 (342)
T 1y1p_A          149 DEKSWNLESIDKAKTLPESDPQKSLWVYAASKTEAELAAWKFMDENKPHFTLNAVLPNYTIGTIFDP  215 (342)
T ss_dssp             CTTCCCHHHHHHHHHSCTTSTTHHHHHHHHHHHHHHHHHHHHHHHHCCSSEEEEEEESEEECCCSCT
T ss_pred             CccccCchhhhhhccccccccccchHHHHHHHHHHHHHHHHHHHhcCCCceEEEEcCCceECCCCCC
Confidence                                   12479999999999999999999778999999999999987543

>3e8x_A Putative NAD-dependent epimerase/dehydratase; structural genomics, APC7755, NADP, P protein structure initiative; HET: MSE NAP; 2.10A {Bacillus halodurans}

Probab=99.91  E-value=9.8e-24  Score=174.17  Aligned_cols=161  Identities=23%  Similarity=0.289  Sum_probs=128.7

Q ss_pred             cCCCCCEEEEcCCCChHHHHHHHHHHHcCCeEEEEeCCcchHHHHHHHHHhhCCCcE-EEEEccCCCHHHHHHHHHHHHh
Q 044010           43 EDVSGKVVIITGASSGIGEHLAYEYARRGACLALCARREKSLEEVADTAREIGSPDV-ITIRADVSKVDDCRSLVEETMN  121 (248)
Q Consensus        43 ~~~~~k~~lVtGg~~gIG~aia~~l~~~G~~V~l~~r~~~~~~~~~~~l~~~~~~~v-~~~~~D~~~~~~~~~~~~~~~~  121 (248)
                      .+++||+++||||+|+||++++++|+++|++|++++|+.++.+...+       .++ .++.+|++         +.+.+
T Consensus        17 ~~l~~~~ilVtGatG~iG~~l~~~L~~~G~~V~~~~R~~~~~~~~~~-------~~~~~~~~~Dl~---------~~~~~   80 (236)
T 3e8x_A           17 LYFQGMRVLVVGANGKVARYLLSELKNKGHEPVAMVRNEEQGPELRE-------RGASDIVVANLE---------EDFSH   80 (236)
T ss_dssp             ----CCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESSGGGHHHHHH-------TTCSEEEECCTT---------SCCGG
T ss_pred             cCcCCCeEEEECCCChHHHHHHHHHHhCCCeEEEEECChHHHHHHHh-------CCCceEEEcccH---------HHHHH
Confidence            57899999999999999999999999999999999999887655432       157 88999998         23344


Q ss_pred             HcCCccEEEEccccCCcccccccCChHHHHHHHHhhhHHHHHHHHHHhhhhhhcCCeEEEEcCccccccC---CCCccch
Q 044010          122 HFGRLDHLVNNAGISSVALFEDIVNITDFKQIMNINFWGSVYTTRFAVPHLRYTKGKIVVLSSAASWLTA---PRMSFYN  198 (248)
Q Consensus       122 ~~g~id~vv~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~g~iV~isS~~~~~~~---~~~~~Y~  198 (248)
                      .++++|++|||||....         +++++.+++|+.++.++++++..   ...++||++||..+..+.   +....|+
T Consensus        81 ~~~~~D~vi~~ag~~~~---------~~~~~~~~~n~~~~~~l~~a~~~---~~~~~iv~~SS~~~~~~~~~~~~~~~Y~  148 (236)
T 3e8x_A           81 AFASIDAVVFAAGSGPH---------TGADKTILIDLWGAIKTIQEAEK---RGIKRFIMVSSVGTVDPDQGPMNMRHYL  148 (236)
T ss_dssp             GGTTCSEEEECCCCCTT---------SCHHHHHHTTTHHHHHHHHHHHH---HTCCEEEEECCTTCSCGGGSCGGGHHHH
T ss_pred             HHcCCCEEEECCCCCCC---------CCccccchhhHHHHHHHHHHHHH---cCCCEEEEEecCCCCCCCCChhhhhhHH
Confidence            56689999999997532         45788999999999999999843   234799999997776654   4567899


Q ss_pred             HHHHHHHHHHHHHHHHhCCCeEEEEEecCccccCccccc
Q 044010          199 ASKAALVLFFETLRVELGSDVGVTIVTPGFIESELTQGK  237 (248)
Q Consensus       199 ~sKaal~~l~~~la~~~~~~i~v~~v~pg~v~T~~~~~~  237 (248)
                      .+|++.+.+.+      ..+++++++.||.+.|+.....
T Consensus       149 ~sK~~~e~~~~------~~gi~~~~lrpg~v~~~~~~~~  181 (236)
T 3e8x_A          149 VAKRLADDELK------RSSLDYTIVRPGPLSNEESTGK  181 (236)
T ss_dssp             HHHHHHHHHHH------HSSSEEEEEEECSEECSCCCSE
T ss_pred             HHHHHHHHHHH------HCCCCEEEEeCCcccCCCCCCe
Confidence            99999999876      2359999999999999876544

>3enk_A UDP-glucose 4-epimerase; seattle structural genomics center for infectious disease, ssgcid, isomerase, NAD; HET: NAD GUD; 1.90A {Burkholderia pseudomallei 1710B} SCOP: c.2.1.0

Probab=99.91  E-value=4.5e-23  Score=178.65  Aligned_cols=174  Identities=15%  Similarity=0.096  Sum_probs=140.5

Q ss_pred             CCCEEEEcCCCChHHHHHHHHHHHcCCeEEEEeCCcchHHHHHHHHHhhCCCcEEEEEccCCCHHHHHHHHHHHHhHcCC
Q 044010           46 SGKVVIITGASSGIGEHLAYEYARRGACLALCARREKSLEEVADTAREIGSPDVITIRADVSKVDDCRSLVEETMNHFGR  125 (248)
Q Consensus        46 ~~k~~lVtGg~~gIG~aia~~l~~~G~~V~l~~r~~~~~~~~~~~l~~~~~~~v~~~~~D~~~~~~~~~~~~~~~~~~g~  125 (248)
                      +++++|||||+|+||.+++++|+++|++|++++|+.+..++..+.+....+.++.++.+|++|.+++++++++     ++
T Consensus         4 ~~~~vlVTGatG~iG~~l~~~L~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~~~~~~~~-----~~   78 (341)
T 3enk_A            4 TKGTILVTGGAGYIGSHTAVELLAHGYDVVIADNLVNSKREAIARIEKITGKTPAFHETDVSDERALARIFDA-----HP   78 (341)
T ss_dssp             SSCEEEEETTTSHHHHHHHHHHHHTTCEEEEECCCSSSCTHHHHHHHHHHSCCCEEECCCTTCHHHHHHHHHH-----SC
T ss_pred             CCcEEEEecCCcHHHHHHHHHHHHCCCcEEEEecCCcchHHHHHHHHhhcCCCceEEEeecCCHHHHHHHHhc-----cC
Confidence            4679999999999999999999999999999999887766666666554445788999999999999999876     48


Q ss_pred             ccEEEEccccCCcccccccCChHHHHHHHHhhhHHHHHHHHHHhhhhhhcCCeEEEEcCcccccc-----------CCCC
Q 044010          126 LDHLVNNAGISSVALFEDIVNITDFKQIMNINFWGSVYTTRFAVPHLRYTKGKIVVLSSAASWLT-----------APRM  194 (248)
Q Consensus       126 id~vv~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~g~iV~isS~~~~~~-----------~~~~  194 (248)
                      +|++||+||......     ..++..+.+++|+.++.++++.+..   ...+++|++||.+.+..           ..+.
T Consensus        79 ~d~vih~A~~~~~~~-----~~~~~~~~~~~n~~~~~~l~~~~~~---~~~~~iv~~SS~~~~g~~~~~~~~e~~~~~~~  150 (341)
T 3enk_A           79 ITAAIHFAALKAVGE-----SVAKPIEYYRNNLDSLLSLLRVMRE---RAVKRIVFSSSATVYGVPERSPIDETFPLSAT  150 (341)
T ss_dssp             CCEEEECCCCCCHHH-----HHHCHHHHHHHHHHHHHHHHHHHHH---TTCCEEEEEEEGGGBCSCSSSSBCTTSCCBCS
T ss_pred             CcEEEECccccccCc-----cccChHHHHHHHHHHHHHHHHHHHh---CCCCEEEEEecceEecCCCCCCCCCCCCCCCC
Confidence            999999999865432     2244567888999999988887542   23479999999776532           1233


Q ss_pred             ccchHHHHHHHHHHHHHHHHhCCCeEEEEEecCccccCc
Q 044010          195 SFYNASKAALVLFFETLRVELGSDVGVTIVTPGFIESEL  233 (248)
Q Consensus       195 ~~Y~~sKaal~~l~~~la~~~~~~i~v~~v~pg~v~T~~  233 (248)
                      ..|+.||.+.+.+++.++.+++ ++++..+.||.+..+.
T Consensus       151 ~~Y~~sK~~~e~~~~~~~~~~~-~~~~~~lRp~~v~G~~  188 (341)
T 3enk_A          151 NPYGQTKLMAEQILRDVEAADP-SWRVATLRYFNPVGAH  188 (341)
T ss_dssp             SHHHHHHHHHHHHHHHHHHHCT-TCEEEEEEECEEECCC
T ss_pred             ChhHHHHHHHHHHHHHHhhcCC-CceEEEEeeccccCCc
Confidence            6899999999999999999874 5899999999887664

>2vz8_A Fatty acid synthase; transferase, phosphopantetheine, multienzyme, megasynthase, fatty acid synthesis; 3.2A {Sus scrofa} PDB: 2vz9_A*

Probab=99.90  E-value=9.1e-24  Score=220.86  Aligned_cols=177  Identities=23%  Similarity=0.244  Sum_probs=139.6

Q ss_pred             CCCEEEEcCCCChHHHHHHHHHHHcCCe-EEEEeCCcchHH---HHHHHHHhhCCCcEEEEEccCCCHHHHHHHHHHHHh
Q 044010           46 SGKVVIITGASSGIGEHLAYEYARRGAC-LALCARREKSLE---EVADTAREIGSPDVITIRADVSKVDDCRSLVEETMN  121 (248)
Q Consensus        46 ~~k~~lVtGg~~gIG~aia~~l~~~G~~-V~l~~r~~~~~~---~~~~~l~~~~~~~v~~~~~D~~~~~~~~~~~~~~~~  121 (248)
                      ++|++|||||++|||+++|++|+++|++ |++++|+..+.+   +..+++++.+ .++.++.||++|.++++++++++. 
T Consensus      1883 ~~k~~lITGgs~GIG~aia~~la~~Ga~~vvl~~R~~~~~~~~~~~~~~l~~~g-~~v~~~~~Dvsd~~~v~~~~~~~~- 1960 (2512)
T 2vz8_A         1883 PHKSYVITGGLGGFGLQLAQWLRLRGAQKLVLTSRSGIRTGYQARQVREWRRQG-VQVLVSTSNASSLDGARSLITEAT- 1960 (2512)
T ss_dssp             TTCEEEEESTTSHHHHHHHHHHHHTTCCEEEEECSSCCCSHHHHHHHHHHHHTT-CEEEEECCCSSSHHHHHHHHHHHH-
T ss_pred             CCCEEEEECCCCCHHHHHHHHHHHCCCCEEEEEeCCCcchHHHHHHHHHHHhCC-CEEEEEecCCCCHHHHHHHHHHHH-
Confidence            5899999999999999999999999996 888999876543   3444555444 478899999999999999999986 


Q ss_pred             HcCCccEEEEccccCCcccccccCChHHHHHHHHhhhHHHHHHHHHHhhhhhhcCCeEEEEcCccccccCCCCccchHHH
Q 044010          122 HFGRLDHLVNNAGISSVALFEDIVNITDFKQIMNINFWGSVYTTRFAVPHLRYTKGKIVVLSSAASWLTAPRMSFYNASK  201 (248)
Q Consensus       122 ~~g~id~vv~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~g~iV~isS~~~~~~~~~~~~Y~~sK  201 (248)
                      ++|++|++|||||+....++.+ .+.++|++.+++|+.|++++.+.+.+.|.+ .|+||++||.++..+.+++.+|++||
T Consensus      1961 ~~g~id~lVnnAgv~~~~~~~~-~t~e~~~~~~~~nv~g~~~l~~~~~~~~~~-~g~iV~iSS~ag~~g~~g~~~Y~aaK 2038 (2512)
T 2vz8_A         1961 QLGPVGGVFNLAMVLRDAVLEN-QTPEFFQDVSKPKYSGTANLDRVTREACPE-LDYFVIFSSVSCGRGNAGQANYGFAN 2038 (2512)
T ss_dssp             HHSCEEEEEECCCC-----------------CTTTTHHHHHHHHHHHHHHCTT-CCEEEEECCHHHHTTCTTCHHHHHHH
T ss_pred             hcCCCcEEEECCCcCCCCchhh-CCHHHHHHHHHHHHHHHHHHHHHHHHhccc-CCEEEEecchhhcCCCCCcHHHHHHH
Confidence            4899999999999877666665 477999999999999999999999988763 48999999999999999999999999


Q ss_pred             HHHHHHHHHHHHHhCCCeEEEEEecCcc
Q 044010          202 AALVLFFETLRVELGSDVGVTIVTPGFI  229 (248)
Q Consensus       202 aal~~l~~~la~~~~~~i~v~~v~pg~v  229 (248)
                      +++++|++.++.+   +++..++.+|++
T Consensus      2039 aal~~l~~~rr~~---Gl~~~a~~~g~~ 2063 (2512)
T 2vz8_A         2039 SAMERICEKRRHD---GLPGLAVQWGAI 2063 (2512)
T ss_dssp             HHHHHHHHHHHHT---TSCCCEEEECCB
T ss_pred             HHHHHHHHHHHHC---CCcEEEEEccCc
Confidence            9999999988776   355666677665

>2gn4_A FLAA1 protein, UDP-GLCNAC C6 dehydratase; rossmann fold, TYK triad, SDR, enzyme, NADP, NADPH, lyase; HET: NDP UD1 MES; 1.90A {Helicobacter pylori} PDB: 2gn6_A* 2gn8_A* 2gn9_A* 2gna_A*

Probab=99.90  E-value=5.5e-23  Score=179.32  Aligned_cols=170  Identities=16%  Similarity=0.234  Sum_probs=141.4

Q ss_pred             cCCCCCEEEEcCCCChHHHHHHHHHHHc-CC-eEEEEeCCcchHHHHHHHHHhhCCCcEEEEEccCCCHHHHHHHHHHHH
Q 044010           43 EDVSGKVVIITGASSGIGEHLAYEYARR-GA-CLALCARREKSLEEVADTAREIGSPDVITIRADVSKVDDCRSLVEETM  120 (248)
Q Consensus        43 ~~~~~k~~lVtGg~~gIG~aia~~l~~~-G~-~V~l~~r~~~~~~~~~~~l~~~~~~~v~~~~~D~~~~~~~~~~~~~~~  120 (248)
                      ..+++|++|||||+|+||.+++++|+++ |+ +|++++|++.+.+...+++.   ..++.++.+|++|.+++.++++   
T Consensus        17 ~~~~~k~vlVTGatG~iG~~l~~~L~~~~g~~~V~~~~r~~~~~~~~~~~~~---~~~v~~~~~Dl~d~~~l~~~~~---   90 (344)
T 2gn4_A           17 NMLDNQTILITGGTGSFGKCFVRKVLDTTNAKKIIVYSRDELKQSEMAMEFN---DPRMRFFIGDVRDLERLNYALE---   90 (344)
T ss_dssp             CTTTTCEEEEETTTSHHHHHHHHHHHHHCCCSEEEEEESCHHHHHHHHHHHC---CTTEEEEECCTTCHHHHHHHTT---
T ss_pred             HhhCCCEEEEECCCcHHHHHHHHHHHhhCCCCEEEEEECChhhHHHHHHHhc---CCCEEEEECCCCCHHHHHHHHh---
Confidence            3578999999999999999999999999 98 99999999876666555543   2478999999999998887764   


Q ss_pred             hHcCCccEEEEccccCCcccccccCChHHHHHHHHhhhHHHHHHHHHHhhhhhhcCCeEEEEcCccccccCCCCccchHH
Q 044010          121 NHFGRLDHLVNNAGISSVALFEDIVNITDFKQIMNINFWGSVYTTRFAVPHLRYTKGKIVVLSSAASWLTAPRMSFYNAS  200 (248)
Q Consensus       121 ~~~g~id~vv~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~g~iV~isS~~~~~~~~~~~~Y~~s  200 (248)
                          ++|+|||+||......     ...+..+.+++|+.++.++++++.+.   ..+++|++||..+..+   ...|++|
T Consensus        91 ----~~D~Vih~Aa~~~~~~-----~~~~~~~~~~~Nv~gt~~l~~aa~~~---~v~~~V~~SS~~~~~p---~~~Y~~s  155 (344)
T 2gn4_A           91 ----GVDICIHAAALKHVPI-----AEYNPLECIKTNIMGASNVINACLKN---AISQVIALSTDKAANP---INLYGAT  155 (344)
T ss_dssp             ----TCSEEEECCCCCCHHH-----HHHSHHHHHHHHHHHHHHHHHHHHHT---TCSEEEEECCGGGSSC---CSHHHHH
T ss_pred             ----cCCEEEECCCCCCCCc-----hhcCHHHHHHHHHHHHHHHHHHHHhC---CCCEEEEecCCccCCC---ccHHHHH
Confidence                6999999999764321     12345689999999999999998764   3469999999776554   4689999


Q ss_pred             HHHHHHHHHHHHHHhCC-CeEEEEEecCccccCc
Q 044010          201 KAALVLFFETLRVELGS-DVGVTIVTPGFIESEL  233 (248)
Q Consensus       201 Kaal~~l~~~la~~~~~-~i~v~~v~pg~v~T~~  233 (248)
                      |++.+.+++.++.++++ +++++++.||.+.++.
T Consensus       156 K~~~E~~~~~~~~~~~~~g~~~~~vRpg~v~g~~  189 (344)
T 2gn4_A          156 KLCSDKLFVSANNFKGSSQTQFSVVRYGNVVGSR  189 (344)
T ss_dssp             HHHHHHHHHHGGGCCCSSCCEEEEECCCEETTCT
T ss_pred             HHHHHHHHHHHHHHhCCCCcEEEEEEeccEECCC
Confidence            99999999999998865 4999999999998864

>2z1m_A GDP-D-mannose dehydratase; short-chain dehydrogenase/reductase, lyase, structural genom NPPSFA; HET: NDP GDP; 2.00A {Aquifex aeolicus} PDB: 2z95_A*

Probab=99.90  E-value=5.4e-23  Score=178.04  Aligned_cols=176  Identities=19%  Similarity=0.118  Sum_probs=137.9

Q ss_pred             CCCCEEEEcCCCChHHHHHHHHHHHcCCeEEEEeCCcchHHHHHHHHHhhC-CCcEEEEEccCCCHHHHHHHHHHHHhHc
Q 044010           45 VSGKVVIITGASSGIGEHLAYEYARRGACLALCARREKSLEEVADTAREIG-SPDVITIRADVSKVDDCRSLVEETMNHF  123 (248)
Q Consensus        45 ~~~k~~lVtGg~~gIG~aia~~l~~~G~~V~l~~r~~~~~~~~~~~l~~~~-~~~v~~~~~D~~~~~~~~~~~~~~~~~~  123 (248)
                      |++|++|||||+|+||.+++++|+++|++|++++|+.++.+.  +.++... ..++.++.+|++|.+++.++++.+    
T Consensus         1 m~~~~vlVtGatG~iG~~l~~~L~~~G~~V~~~~r~~~~~~~--~~~~~~~~~~~~~~~~~Dl~d~~~~~~~~~~~----   74 (345)
T 2z1m_A            1 MSGKRALITGIRGQDGAYLAKLLLEKGYEVYGADRRSGEFAS--WRLKELGIENDVKIIHMDLLEFSNIIRTIEKV----   74 (345)
T ss_dssp             --CCEEEEETTTSHHHHHHHHHHHHTTCEEEEECSCCSTTTT--HHHHHTTCTTTEEECCCCTTCHHHHHHHHHHH----
T ss_pred             CCCCEEEEECCCChHHHHHHHHHHHCCCEEEEEECCCccccc--ccHhhccccCceeEEECCCCCHHHHHHHHHhc----
Confidence            468999999999999999999999999999999998765332  1222221 236889999999999999998865    


Q ss_pred             CCccEEEEccccCCcccccccCChHHHHHHHHhhhHHHHHHHHHHhhhhhhcCCeEEEEcCccccc-----------cCC
Q 044010          124 GRLDHLVNNAGISSVALFEDIVNITDFKQIMNINFWGSVYTTRFAVPHLRYTKGKIVVLSSAASWL-----------TAP  192 (248)
Q Consensus       124 g~id~vv~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~g~iV~isS~~~~~-----------~~~  192 (248)
                       ++|++||+||.....     .+.+++++.+++|+.++.++++++.+. . .++++|++||.+.+.           +.+
T Consensus        75 -~~d~vih~A~~~~~~-----~~~~~~~~~~~~Nv~g~~~l~~a~~~~-~-~~~~iv~~SS~~vyg~~~~~~~~e~~~~~  146 (345)
T 2z1m_A           75 -QPDEVYNLAAQSFVG-----VSFEQPILTAEVDAIGVLRILEALRTV-K-PDTKFYQASTSEMFGKVQEIPQTEKTPFY  146 (345)
T ss_dssp             -CCSEEEECCCCCCHH-----HHTTSHHHHHHHHTHHHHHHHHHHHHH-C-TTCEEEEEEEGGGGCSCSSSSBCTTSCCC
T ss_pred             -CCCEEEECCCCcchh-----hhhhCHHHHHHHHHHHHHHHHHHHHHh-C-CCceEEEEechhhcCCCCCCCCCccCCCC
Confidence             799999999975421     123567889999999999999998742 1 137999999986542           233


Q ss_pred             CCccchHHHHHHHHHHHHHHHHhC---CC-eEEEEEecCccccCcc
Q 044010          193 RMSFYNASKAALVLFFETLRVELG---SD-VGVTIVTPGFIESELT  234 (248)
Q Consensus       193 ~~~~Y~~sKaal~~l~~~la~~~~---~~-i~v~~v~pg~v~T~~~  234 (248)
                      +...|+.||.+.+.+++.++.+++   .. ++++.+.||...|.+.
T Consensus       147 ~~~~Y~~sK~~~e~~~~~~~~~~~~~~~~~r~~~~~gpg~~~~~~~  192 (345)
T 2z1m_A          147 PRSPYAVAKLFGHWITVNYREAYNMFACSGILFNHESPLRGIEFVT  192 (345)
T ss_dssp             CCSHHHHHHHHHHHHHHHHHHHHCCCEEEEEECCEECTTSCTTSHH
T ss_pred             CCChhHHHHHHHHHHHHHHHHHhCCceEeeeeeeecCCCCCCcchh
Confidence            456899999999999999999986   22 5677889998888763

>1orr_A CDP-tyvelose-2-epimerase; rossmann fold, short-chain dehydrogenase/reductase, isomeras; HET: NAD CDP; 1.50A {Salmonella typhi} SCOP: c.2.1.2

Probab=99.90  E-value=2.9e-22  Score=173.71  Aligned_cols=172  Identities=15%  Similarity=0.111  Sum_probs=138.4

Q ss_pred             CEEEEcCCCChHHHHHHHHHHHcCCeEEEEeCCc-chHHHHHHHHHhhCCCcEEEEEccCCCHHHHHHHHHHHHhHcCCc
Q 044010           48 KVVIITGASSGIGEHLAYEYARRGACLALCARRE-KSLEEVADTAREIGSPDVITIRADVSKVDDCRSLVEETMNHFGRL  126 (248)
Q Consensus        48 k~~lVtGg~~gIG~aia~~l~~~G~~V~l~~r~~-~~~~~~~~~l~~~~~~~v~~~~~D~~~~~~~~~~~~~~~~~~g~i  126 (248)
                      |++|||||+|+||.+++++|+++|++|++++|+. ...+...+.+...  .++.++.+|++|.++++++++..     ++
T Consensus         2 ~~vlVTGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~l~~~--~~~~~~~~Dl~d~~~~~~~~~~~-----~~   74 (347)
T 1orr_A            2 AKLLITGGCGFLGSNLASFALSQGIDLIVFDNLSRKGATDNLHWLSSL--GNFEFVHGDIRNKNDVTRLITKY-----MP   74 (347)
T ss_dssp             CEEEEETTTSHHHHHHHHHHHHTTCEEEEEECCCSTTHHHHHHHHHTT--CCCEEEECCTTCHHHHHHHHHHH-----CC
T ss_pred             cEEEEeCCCchhHHHHHHHHHhCCCEEEEEeCCCccCchhhhhhhccC--CceEEEEcCCCCHHHHHHHHhcc-----CC
Confidence            5799999999999999999999999999999864 3333334444432  25888999999999999988752     69


Q ss_pred             cEEEEccccCCcccccccCChHHHHHHHHhhhHHHHHHHHHHhhhhhhcCCeEEEEcCcccccc----------------
Q 044010          127 DHLVNNAGISSVALFEDIVNITDFKQIMNINFWGSVYTTRFAVPHLRYTKGKIVVLSSAASWLT----------------  190 (248)
Q Consensus       127 d~vv~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~g~iV~isS~~~~~~----------------  190 (248)
                      |+|||+||.....     .+.+++++.+++|+.++.++++++.+...  ++++|++||.+.+..                
T Consensus        75 d~vih~A~~~~~~-----~~~~~~~~~~~~nv~~~~~l~~a~~~~~~--~~~iv~~SS~~v~g~~~~~~~~e~~~~~~~~  147 (347)
T 1orr_A           75 DSCFHLAGQVAMT-----TSIDNPCMDFEINVGGTLNLLEAVRQYNS--NCNIIYSSTNKVYGDLEQYKYNETETRYTCV  147 (347)
T ss_dssp             SEEEECCCCCCHH-----HHHHCHHHHHHHHHHHHHHHHHHHHHHCT--TCEEEEEEEGGGGTTCTTSCEEECSSCEEET
T ss_pred             CEEEECCcccChh-----hhhhCHHHHHHHHHHHHHHHHHHHHHhCC--CceEEEeccHHHhCCCCcCCccccccccccc
Confidence            9999999975421     13456788999999999999999987643  369999999775432                


Q ss_pred             -----------CCCCccchHHHHHHHHHHHHHHHHhCCCeEEEEEecCccccCccc
Q 044010          191 -----------APRMSFYNASKAALVLFFETLRVELGSDVGVTIVTPGFIESELTQ  235 (248)
Q Consensus       191 -----------~~~~~~Y~~sKaal~~l~~~la~~~~~~i~v~~v~pg~v~T~~~~  235 (248)
                                 ..+...|+.+|.+.+.+++.++.++  +++++.+.||.+.++...
T Consensus       148 ~~~~~~~e~~~~~~~~~Y~~sK~~~E~~~~~~~~~~--gi~~~ilrp~~v~g~~~~  201 (347)
T 1orr_A          148 DKPNGYDESTQLDFHSPYGCSKGAADQYMLDYARIF--GLNTVVFRHSSMYGGRQF  201 (347)
T ss_dssp             TCTTCBCTTSCCCCCHHHHHHHHHHHHHHHHHHHHH--CCEEEEEEECCEECTTCC
T ss_pred             ccccCccccCCCCCCCchHHHHHHHHHHHHHHHHHh--CCcEEEEccCceeCcCCC
Confidence                       2245689999999999999999987  599999999999998753

>1rkx_A CDP-glucose-4,6-dehydratase; SDR, lyase; HET: NAD; 1.80A {Yersinia pseudotuberculosis} SCOP: c.2.1.2 PDB: 1wvg_A*

Probab=99.90  E-value=1e-22  Score=177.73  Aligned_cols=177  Identities=17%  Similarity=0.131  Sum_probs=142.5

Q ss_pred             CCCCCEEEEcCCCChHHHHHHHHHHHcCCeEEEEeCCcchHHHHHHHHHhhCCCcEEEEEccCCCHHHHHHHHHHHHhHc
Q 044010           44 DVSGKVVIITGASSGIGEHLAYEYARRGACLALCARREKSLEEVADTAREIGSPDVITIRADVSKVDDCRSLVEETMNHF  123 (248)
Q Consensus        44 ~~~~k~~lVtGg~~gIG~aia~~l~~~G~~V~l~~r~~~~~~~~~~~l~~~~~~~v~~~~~D~~~~~~~~~~~~~~~~~~  123 (248)
                      .++++++|||||+|+||.+++++|+++|++|++++|+.++.+...+.+.  ...++.++.+|++|.+++.++++..    
T Consensus         6 ~~~~~~vlVtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~--~~~~~~~~~~Dl~d~~~~~~~~~~~----   79 (357)
T 1rkx_A            6 FWQGKRVFVTGHTGFKGGWLSLWLQTMGATVKGYSLTAPTVPSLFETAR--VADGMQSEIGDIRDQNKLLESIREF----   79 (357)
T ss_dssp             HHTTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESSCSSSSCHHHHTT--TTTTSEEEECCTTCHHHHHHHHHHH----
T ss_pred             hhCCCEEEEECCCchHHHHHHHHHHhCCCeEEEEeCCCcccchhhHhhc--cCCceEEEEccccCHHHHHHHHHhc----
Confidence            4678999999999999999999999999999999998765544433332  1236889999999999999988765    


Q ss_pred             CCccEEEEccccCCcccccccCChHHHHHHHHhhhHHHHHHHHHHhhhhhhcCCeEEEEcCccccc------------cC
Q 044010          124 GRLDHLVNNAGISSVALFEDIVNITDFKQIMNINFWGSVYTTRFAVPHLRYTKGKIVVLSSAASWL------------TA  191 (248)
Q Consensus       124 g~id~vv~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~g~iV~isS~~~~~------------~~  191 (248)
                       ++|+|||+||.....     .+.+++++.+++|+.++.++++++.+.  ...+++|++||...+.            +.
T Consensus        80 -~~d~vih~A~~~~~~-----~~~~~~~~~~~~n~~~~~~l~~a~~~~--~~~~~~v~~SS~~vyg~~~~~~~~~E~~~~  151 (357)
T 1rkx_A           80 -QPEIVFHMAAQPLVR-----LSYSEPVETYSTNVMGTVYLLEAIRHV--GGVKAVVNITSDKCYDNKEWIWGYRENEAM  151 (357)
T ss_dssp             -CCSEEEECCSCCCHH-----HHHHCHHHHHHHHTHHHHHHHHHHHHH--CCCCEEEEECCGGGBCCCCSSSCBCTTSCB
T ss_pred             -CCCEEEECCCCcccc-----cchhCHHHHHHHHHHHHHHHHHHHHHh--CCCCeEEEecCHHHhCCCCcCCCCCCCCCC
Confidence             699999999963221     134567889999999999999998753  1247999999987542            22


Q ss_pred             CCCccchHHHHHHHHHHHHHHHHhC-------CCeEEEEEecCccccCcc
Q 044010          192 PRMSFYNASKAALVLFFETLRVELG-------SDVGVTIVTPGFIESELT  234 (248)
Q Consensus       192 ~~~~~Y~~sKaal~~l~~~la~~~~-------~~i~v~~v~pg~v~T~~~  234 (248)
                      .+...|+.+|.+.+.+++.++.++.       ++++++.+.||.+.++..
T Consensus       152 ~~~~~Y~~sK~~~e~~~~~~~~~~~~~~~~~~~gi~~~~lrp~~v~G~~~  201 (357)
T 1rkx_A          152 GGYDPYSNSKGCAELVTSSYRNSFFNPANYGQHGTAVATVRAGNVIGGGD  201 (357)
T ss_dssp             CCSSHHHHHHHHHHHHHHHHHHHHSCGGGHHHHCCEEEEEECCCEECTTC
T ss_pred             CCCCccHHHHHHHHHHHHHHHHHHhhhhccccCCceEEEEeeceeeCCCC
Confidence            3456899999999999999999884       369999999999998753

>2bka_A CC3, TAT-interacting protein TIP30; NADPH, PEG600, transcription; HET: NDP PE8; 1.7A {Homo sapiens} SCOP: c.2.1.2 PDB: 2fmu_A

Probab=99.89  E-value=1.4e-23  Score=173.50  Aligned_cols=159  Identities=21%  Similarity=0.188  Sum_probs=128.0

Q ss_pred             CCCCCEEEEcCCCChHHHHHHHHHHHcCC--eEEEEeCCcchHHHHHHHHHhhCCCcEEEEEccCCCHHHHHHHHHHHHh
Q 044010           44 DVSGKVVIITGASSGIGEHLAYEYARRGA--CLALCARREKSLEEVADTAREIGSPDVITIRADVSKVDDCRSLVEETMN  121 (248)
Q Consensus        44 ~~~~k~~lVtGg~~gIG~aia~~l~~~G~--~V~l~~r~~~~~~~~~~~l~~~~~~~v~~~~~D~~~~~~~~~~~~~~~~  121 (248)
                      +|++|+++||||+||||++++++|+++|+  +|++++|+.++.+...       ..++.++.+|++|.++++++++    
T Consensus        15 ~m~~~~vlVtGasg~iG~~l~~~L~~~G~~~~V~~~~r~~~~~~~~~-------~~~~~~~~~D~~d~~~~~~~~~----   83 (242)
T 2bka_A           15 RMQNKSVFILGASGETGRVLLKEILEQGLFSKVTLIGRRKLTFDEEA-------YKNVNQEVVDFEKLDDYASAFQ----   83 (242)
T ss_dssp             HHTCCEEEEECTTSHHHHHHHHHHHHHTCCSEEEEEESSCCCCCSGG-------GGGCEEEECCGGGGGGGGGGGS----
T ss_pred             hhcCCeEEEECCCcHHHHHHHHHHHcCCCCCEEEEEEcCCCCccccc-------cCCceEEecCcCCHHHHHHHhc----
Confidence            36789999999999999999999999999  9999999876543211       1257789999999988877654    


Q ss_pred             HcCCccEEEEccccCCcccccccCChHHHHHHHHhhhHHHHHHHHHHhhhhhhcCCeEEEEcCccccccCCCCccchHHH
Q 044010          122 HFGRLDHLVNNAGISSVALFEDIVNITDFKQIMNINFWGSVYTTRFAVPHLRYTKGKIVVLSSAASWLTAPRMSFYNASK  201 (248)
Q Consensus       122 ~~g~id~vv~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~g~iV~isS~~~~~~~~~~~~Y~~sK  201 (248)
                         ++|++|||||....        .+++++.+++|+.++..+++++.+   ...++||++||..++.+  +...|+++|
T Consensus        84 ---~~d~vi~~ag~~~~--------~~~~~~~~~~n~~~~~~~~~~~~~---~~~~~iv~~SS~~~~~~--~~~~Y~~sK  147 (242)
T 2bka_A           84 ---GHDVGFCCLGTTRG--------KAGAEGFVRVDRDYVLKSAELAKA---GGCKHFNLLSSKGADKS--SNFLYLQVK  147 (242)
T ss_dssp             ---SCSEEEECCCCCHH--------HHHHHHHHHHHTHHHHHHHHHHHH---TTCCEEEEECCTTCCTT--CSSHHHHHH
T ss_pred             ---CCCEEEECCCcccc--------cCCcccceeeeHHHHHHHHHHHHH---CCCCEEEEEccCcCCCC--CcchHHHHH
Confidence               79999999996432        245678899999999998887543   23479999999887653  456899999


Q ss_pred             HHHHHHHHHHHHHhCCCe-EEEEEecCccccCccc
Q 044010          202 AALVLFFETLRVELGSDV-GVTIVTPGFIESELTQ  235 (248)
Q Consensus       202 aal~~l~~~la~~~~~~i-~v~~v~pg~v~T~~~~  235 (248)
                      ++++.+++.+      .+ ++++|.||.+.|++..
T Consensus       148 ~~~e~~~~~~------~~~~~~~vrpg~v~~~~~~  176 (242)
T 2bka_A          148 GEVEAKVEEL------KFDRYSVFRPGVLLCDRQE  176 (242)
T ss_dssp             HHHHHHHHTT------CCSEEEEEECCEEECTTGG
T ss_pred             HHHHHHHHhc------CCCCeEEEcCceecCCCCC
Confidence            9999998754      24 8999999999999754

>2pk3_A GDP-6-deoxy-D-LYXO-4-hexulose reductase; SDR, short-chain dehydrogenase/reductase, rossmann fold, oxidoreductase; HET: A2R GDD; 1.82A {Aneurinibacillus thermoaerophilus}

Probab=99.89  E-value=2.3e-22  Score=172.85  Aligned_cols=167  Identities=16%  Similarity=0.146  Sum_probs=135.7

Q ss_pred             CCCCCEEEEcCCCChHHHHHHHHHHHcCCeEEEEeCCcchHHHHHHHHHhhCCCcEEEEEccCCCHHHHHHHHHHHHhHc
Q 044010           44 DVSGKVVIITGASSGIGEHLAYEYARRGACLALCARREKSLEEVADTAREIGSPDVITIRADVSKVDDCRSLVEETMNHF  123 (248)
Q Consensus        44 ~~~~k~~lVtGg~~gIG~aia~~l~~~G~~V~l~~r~~~~~~~~~~~l~~~~~~~v~~~~~D~~~~~~~~~~~~~~~~~~  123 (248)
                      ..+.+++|||||+|+||.+++++|+++|++|++++|+.+. +.    +      ++.++.+|++|.++++++++.     
T Consensus         9 ~~~~~~vlVTGatG~iG~~l~~~L~~~G~~V~~~~r~~~~-~~----l------~~~~~~~Dl~d~~~~~~~~~~-----   72 (321)
T 2pk3_A            9 HHGSMRALITGVAGFVGKYLANHLTEQNVEVFGTSRNNEA-KL----P------NVEMISLDIMDSQRVKKVISD-----   72 (321)
T ss_dssp             ----CEEEEETTTSHHHHHHHHHHHHTTCEEEEEESCTTC-CC----T------TEEEEECCTTCHHHHHHHHHH-----
T ss_pred             ccCcceEEEECCCChHHHHHHHHHHHCCCEEEEEecCCcc-cc----c------eeeEEECCCCCHHHHHHHHHh-----
Confidence            4567899999999999999999999999999999998754 21    1      578899999999999988875     


Q ss_pred             CCccEEEEccccCCcccccccCChHHHHHHHHhhhHHHHHHHHHHhhhhhhcCCeEEEEcCccccccC------------
Q 044010          124 GRLDHLVNNAGISSVALFEDIVNITDFKQIMNINFWGSVYTTRFAVPHLRYTKGKIVVLSSAASWLTA------------  191 (248)
Q Consensus       124 g~id~vv~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~g~iV~isS~~~~~~~------------  191 (248)
                      +++|+|||+||.....     .+.+++++.+++|+.++.++++++ +.+. ..+++|++||.+.+.+.            
T Consensus        73 ~~~d~vih~A~~~~~~-----~~~~~~~~~~~~Nv~g~~~l~~a~-~~~~-~~~~iv~~SS~~v~g~~~~~~~~~~E~~~  145 (321)
T 2pk3_A           73 IKPDYIFHLAAKSSVK-----DSWLNKKGTFSTNVFGTLHVLDAV-RDSN-LDCRILTIGSSEEYGMILPEESPVSEENQ  145 (321)
T ss_dssp             HCCSEEEECCSCCCHH-----HHTTCHHHHHHHHHHHHHHHHHHH-HHHT-CCCEEEEEEEGGGTBSCCGGGCSBCTTSC
T ss_pred             cCCCEEEEcCcccchh-----hhhhcHHHHHHHHHHHHHHHHHHH-HHhC-CCCeEEEEccHHhcCCCCCCCCCCCCCCC
Confidence            3799999999976432     122467889999999999999998 4442 35799999998765432            


Q ss_pred             -CCCccchHHHHHHHHHHHHHHHHhCCCeEEEEEecCccccCccc
Q 044010          192 -PRMSFYNASKAALVLFFETLRVELGSDVGVTIVTPGFIESELTQ  235 (248)
Q Consensus       192 -~~~~~Y~~sKaal~~l~~~la~~~~~~i~v~~v~pg~v~T~~~~  235 (248)
                       ++...|+.+|++.+.+++.++.++  +++++.+.||.+.++...
T Consensus       146 ~~~~~~Y~~sK~~~E~~~~~~~~~~--gi~~~ilrp~~v~g~~~~  188 (321)
T 2pk3_A          146 LRPMSPYGVSKASVGMLARQYVKAY--GMDIIHTRTFNHIGPGQS  188 (321)
T ss_dssp             CBCCSHHHHHHHHHHHHHHHHHHHH--CCEEEEEEECEEECTTCC
T ss_pred             CCCCCccHHHHHHHHHHHHHHHHHc--CCCEEEEEeCcccCcCCC
Confidence             346789999999999999999886  589999999999887654

>2pzm_A Putative nucleotide sugar epimerase/ dehydratase; rossman fold, protein-NAD complex, protein-nucleotide comple binding protein; HET: NAD UDP; 2.00A {Bordetella bronchiseptica} PDB: 2pzl_A* 2pzk_A*

Probab=99.88  E-value=2.5e-22  Score=173.74  Aligned_cols=172  Identities=16%  Similarity=0.162  Sum_probs=133.4

Q ss_pred             hhccccCCCCCEEEEcCCCChHHHHHHHHHHHcCCeEEEEeCCcchHHHHHHHHHhhCCCcEEEEEccCCCHHHHHHHHH
Q 044010           38 NSIFSEDVSGKVVIITGASSGIGEHLAYEYARRGACLALCARREKSLEEVADTAREIGSPDVITIRADVSKVDDCRSLVE  117 (248)
Q Consensus        38 ~~~~~~~~~~k~~lVtGg~~gIG~aia~~l~~~G~~V~l~~r~~~~~~~~~~~l~~~~~~~v~~~~~D~~~~~~~~~~~~  117 (248)
                      ....+++++++++|||||+|+||.+++++|+++|++|++++|+.+...+..+.+     .++.++.+|++|.++++++++
T Consensus        11 ~~~~~~~~~~~~vlVTGasG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~l-----~~v~~~~~Dl~d~~~~~~~~~   85 (330)
T 2pzm_A           11 SSGLVPRGSHMRILITGGAGCLGSNLIEHWLPQGHEILVIDNFATGKREVLPPV-----AGLSVIEGSVTDAGLLERAFD   85 (330)
T ss_dssp             ---CCSTTTCCEEEEETTTSHHHHHHHHHHGGGTCEEEEEECCSSSCGGGSCSC-----TTEEEEECCTTCHHHHHHHHH
T ss_pred             ccCCcccCCCCEEEEECCCCHHHHHHHHHHHHCCCEEEEEECCCccchhhhhcc-----CCceEEEeeCCCHHHHHHHHh
Confidence            445567899999999999999999999999999999999999764322111111     368899999999999999887


Q ss_pred             HHHhHcCCccEEEEccccCCcccccccCChHHHHHHHHhhhHHHHHHHHHHhhhhhhcCCeEEEEcCccccccC-----C
Q 044010          118 ETMNHFGRLDHLVNNAGISSVALFEDIVNITDFKQIMNINFWGSVYTTRFAVPHLRYTKGKIVVLSSAASWLTA-----P  192 (248)
Q Consensus       118 ~~~~~~g~id~vv~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~g~iV~isS~~~~~~~-----~  192 (248)
                      +.     ++|+|||+||.....      +.++++  +++|+.++.++++++..   ...+++|++||.+++.+.     +
T Consensus        86 ~~-----~~D~vih~A~~~~~~------~~~~~~--~~~N~~~~~~l~~a~~~---~~~~~iV~~SS~~~~~~~~~~~~~  149 (330)
T 2pzm_A           86 SF-----KPTHVVHSAAAYKDP------DDWAED--AATNVQGSINVAKAASK---AGVKRLLNFQTALCYGRPATVPIP  149 (330)
T ss_dssp             HH-----CCSEEEECCCCCSCT------TCHHHH--HHHHTHHHHHHHHHHHH---HTCSEEEEEEEGGGGCSCSSSSBC
T ss_pred             hc-----CCCEEEECCccCCCc------cccChh--HHHHHHHHHHHHHHHHH---cCCCEEEEecCHHHhCCCccCCCC
Confidence            65     799999999976532      235555  99999999999999873   234799999998776543     2


Q ss_pred             ------CCccchHHHHHHHHHHHHHHHHhCCC-eE-EEEEecCccccCc
Q 044010          193 ------RMSFYNASKAALVLFFETLRVELGSD-VG-VTIVTPGFIESEL  233 (248)
Q Consensus       193 ------~~~~Y~~sKaal~~l~~~la~~~~~~-i~-v~~v~pg~v~T~~  233 (248)
                            +...|+.+|++.+.+++.+  ++... +| ++.+.||. .|++
T Consensus       150 ~~E~~~~~~~Y~~sK~~~e~~~~~~--~~~~~~iR~~~v~gp~~-~~~~  195 (330)
T 2pzm_A          150 IDSPTAPFTSYGISKTAGEAFLMMS--DVPVVSLRLANVTGPRL-AIGP  195 (330)
T ss_dssp             TTCCCCCCSHHHHHHHHHHHHHHTC--SSCEEEEEECEEECTTC-CSSH
T ss_pred             cCCCCCCCChHHHHHHHHHHHHHHc--CCCEEEEeeeeeECcCC-CCCH
Confidence                  5678999999999999887  44433 77 77888886 4554

>1i24_A Sulfolipid biosynthesis protein SQD1; SDR, short-chain dehydrogenase/reductase, rossmann fold, BIO protein; HET: NAD UPG; 1.20A {Arabidopsis thaliana} SCOP: c.2.1.2 PDB: 1i2c_A* 1i2b_A* 1qrr_A*

Probab=99.88  E-value=2.6e-21  Score=171.30  Aligned_cols=180  Identities=12%  Similarity=0.070  Sum_probs=136.6

Q ss_pred             CCCCCEEEEcCCCChHHHHHHHHHHHcCCeEEEEeCCcchHH----------------HHHHHHHhhCCCcEEEEEccCC
Q 044010           44 DVSGKVVIITGASSGIGEHLAYEYARRGACLALCARREKSLE----------------EVADTAREIGSPDVITIRADVS  107 (248)
Q Consensus        44 ~~~~k~~lVtGg~~gIG~aia~~l~~~G~~V~l~~r~~~~~~----------------~~~~~l~~~~~~~v~~~~~D~~  107 (248)
                      ..++.++|||||+|.||.+++++|+++|++|++++|+.....                +..+.+......++.++.+|++
T Consensus         8 ~~~~~~vlVTG~tGfIG~~l~~~L~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~v~~~~~Dl~   87 (404)
T 1i24_A            8 HHHGSRVMVIGGDGYCGWATALHLSKKNYEVCIVDNLVRRLFDHQLGLESLTPIASIHDRISRWKALTGKSIELYVGDIC   87 (404)
T ss_dssp             ----CEEEEETTTSHHHHHHHHHHHHTTCEEEEEECCHHHHHHHHHTCCCSSCCCCHHHHHHHHHHHHCCCCEEEESCTT
T ss_pred             ccCCCeEEEeCCCcHHHHHHHHHHHhCCCeEEEEEecCccccccccccccccccchhhhhhhhHhhccCCceEEEECCCC
Confidence            456889999999999999999999999999999998653211                1111111112236889999999


Q ss_pred             CHHHHHHHHHHHHhHcCCccEEEEccccCCcccccccCChHHHHHHHHhhhHHHHHHHHHHhhhhhhcCCeEEEEcCccc
Q 044010          108 KVDDCRSLVEETMNHFGRLDHLVNNAGISSVALFEDIVNITDFKQIMNINFWGSVYTTRFAVPHLRYTKGKIVVLSSAAS  187 (248)
Q Consensus       108 ~~~~~~~~~~~~~~~~g~id~vv~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~g~iV~isS~~~  187 (248)
                      |.+++.++++..     ++|+|||+||........  .+.+++...+++|+.++.++++++.+.-  .+.++|++||.+.
T Consensus        88 d~~~~~~~~~~~-----~~D~Vih~A~~~~~~~~~--~~~~~~~~~~~~Nv~gt~~ll~a~~~~~--~~~~~V~~SS~~v  158 (404)
T 1i24_A           88 DFEFLAESFKSF-----EPDSVVHFGEQRSAPYSM--IDRSRAVYTQHNNVIGTLNVLFAIKEFG--EECHLVKLGTMGE  158 (404)
T ss_dssp             SHHHHHHHHHHH-----CCSEEEECCSCCCHHHHT--SCHHHHHHHHHHHHHHHHHHHHHHHHHC--TTCEEEEECCGGG
T ss_pred             CHHHHHHHHhcc-----CCCEEEECCCCCCccchh--hCccchhhhHHHHHHHHHHHHHHHHHhC--CCcEEEEeCcHHH
Confidence            999999888765     699999999976533222  2456778899999999999999986431  1249999999765


Q ss_pred             cc------------------------cCCCCccchHHHHHHHHHHHHHHHHhCCCeEEEEEecCccccCcc
Q 044010          188 WL------------------------TAPRMSFYNASKAALVLFFETLRVELGSDVGVTIVTPGFIESELT  234 (248)
Q Consensus       188 ~~------------------------~~~~~~~Y~~sKaal~~l~~~la~~~~~~i~v~~v~pg~v~T~~~  234 (248)
                      +.                        +..+...|+.||.+.+.+++.++.++  +++++++.||.|.++..
T Consensus       159 yg~~~~~~~E~~~~~~~~~~~~~~~~~~~~~~~Y~~sK~~~e~~~~~~~~~~--gi~~~ivrp~~v~Gp~~  227 (404)
T 1i24_A          159 YGTPNIDIEEGYITITHNGRTDTLPYPKQASSFYHLSKVHDSHNIAFTCKAW--GIRATDLNQGVVYGVKT  227 (404)
T ss_dssp             GCCCSSCBCSSEEEEEETTEEEEEECCCCCCSHHHHHHHHHHHHHHHHHHHH--CCEEEEEEECEEECSCC
T ss_pred             hCCCCCCCCccccccccccccccccCCCCCCChhHHHHHHHHHHHHHHHHhc--CCeEEEEecceeeCCCC
Confidence            43                        22235679999999999999999887  58999999999988754

>2hun_A 336AA long hypothetical DTDP-glucose 4,6-dehydrat; rossmann fold, structural genomics, NPPSFA; HET: NAD; 2.07A {Pyrococcus horikoshii}

Probab=99.88  E-value=4.1e-22  Score=172.30  Aligned_cols=172  Identities=15%  Similarity=0.121  Sum_probs=134.3

Q ss_pred             CCCCEEEEcCCCChHHHHHHHHHHHcC--CeEEEEeCCcc--hHHHHHHHHHhhCCCcEEEEEccCCCHHHHHHHHHHHH
Q 044010           45 VSGKVVIITGASSGIGEHLAYEYARRG--ACLALCARREK--SLEEVADTAREIGSPDVITIRADVSKVDDCRSLVEETM  120 (248)
Q Consensus        45 ~~~k~~lVtGg~~gIG~aia~~l~~~G--~~V~l~~r~~~--~~~~~~~~l~~~~~~~v~~~~~D~~~~~~~~~~~~~~~  120 (248)
                      |+++++|||||+|+||.+++++|+++|  ++|++++|+..  ..+.. +++..  ..++.++.+|++|.+++++++    
T Consensus         1 M~~m~vlVTGatG~iG~~l~~~L~~~g~~~~V~~~~r~~~~~~~~~~-~~~~~--~~~~~~~~~Dl~d~~~~~~~~----   73 (336)
T 2hun_A            1 MHSMKLLVTGGMGFIGSNFIRYILEKHPDWEVINIDKLGYGSNPANL-KDLED--DPRYTFVKGDVADYELVKELV----   73 (336)
T ss_dssp             --CCEEEEETTTSHHHHHHHHHHHHHCTTCEEEEEECCCTTCCGGGG-TTTTT--CTTEEEEECCTTCHHHHHHHH----
T ss_pred             CCCCeEEEECCCchHHHHHHHHHHHhCCCCEEEEEecCcccCchhHH-hhhcc--CCceEEEEcCCCCHHHHHHHh----
Confidence            356789999999999999999999997  89999998642  11211 11111  237889999999999988887    


Q ss_pred             hHcCCccEEEEccccCCcccccccCChHHHHHHHHhhhHHHHHHHHHHhhhhhhcCCeEEEEcCccccc-----------
Q 044010          121 NHFGRLDHLVNNAGISSVALFEDIVNITDFKQIMNINFWGSVYTTRFAVPHLRYTKGKIVVLSSAASWL-----------  189 (248)
Q Consensus       121 ~~~g~id~vv~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~g~iV~isS~~~~~-----------  189 (248)
                         +++|+|||+||.....     .+.+++++.+++|+.++.++++++.+.  ...+++|++||.+.+.           
T Consensus        74 ---~~~d~vih~A~~~~~~-----~~~~~~~~~~~~Nv~g~~~l~~a~~~~--~~~~~iv~~SS~~vyg~~~~~~~~E~~  143 (336)
T 2hun_A           74 ---RKVDGVVHLAAESHVD-----RSISSPEIFLHSNVIGTYTLLESIRRE--NPEVRFVHVSTDEVYGDILKGSFTEND  143 (336)
T ss_dssp             ---HTCSEEEECCCCCCHH-----HHHHCTHHHHHHHHHHHHHHHHHHHHH--CTTSEEEEEEEGGGGCCCSSSCBCTTB
T ss_pred             ---hCCCEEEECCCCcChh-----hhhhCHHHHHHHHHHHHHHHHHHHHHh--CCCcEEEEeccHHHHCCCCCCCcCCCC
Confidence               2799999999975421     123567789999999999999999866  2247999999976543           


Q ss_pred             cCCCCccchHHHHHHHHHHHHHHHHhCCCeEEEEEecCccccCccc
Q 044010          190 TAPRMSFYNASKAALVLFFETLRVELGSDVGVTIVTPGFIESELTQ  235 (248)
Q Consensus       190 ~~~~~~~Y~~sKaal~~l~~~la~~~~~~i~v~~v~pg~v~T~~~~  235 (248)
                      +.++...|+.||++.+.+++.++.++  +++++.+.||.+.++...
T Consensus       144 ~~~~~~~Y~~sK~~~e~~~~~~~~~~--~~~~~ilrp~~v~g~~~~  187 (336)
T 2hun_A          144 RLMPSSPYSATKAASDMLVLGWTRTY--NLNASITRCTNNYGPYQF  187 (336)
T ss_dssp             CCCCCSHHHHHHHHHHHHHHHHHHHT--TCEEEEEEECEEESTTCC
T ss_pred             CCCCCCccHHHHHHHHHHHHHHHHHh--CCCEEEEeeeeeeCcCCC
Confidence            23345689999999999999999887  489999999999988753

>1gy8_A UDP-galactose 4-epimerase; oxidoreductase; HET: NAD UDP; 2.0A {Trypanosoma brucei} SCOP: c.2.1.2 PDB: 2cnb_A*

Probab=99.88  E-value=3.8e-21  Score=169.93  Aligned_cols=173  Identities=17%  Similarity=0.107  Sum_probs=135.3

Q ss_pred             CCEEEEcCCCChHHHHHHHHHH-HcCCeEEEEeCCcch---------HHHHHHHHHhhCC----Cc---EEEEEccCCCH
Q 044010           47 GKVVIITGASSGIGEHLAYEYA-RRGACLALCARREKS---------LEEVADTAREIGS----PD---VITIRADVSKV  109 (248)
Q Consensus        47 ~k~~lVtGg~~gIG~aia~~l~-~~G~~V~l~~r~~~~---------~~~~~~~l~~~~~----~~---v~~~~~D~~~~  109 (248)
                      ++++|||||+|+||.+++++|+ ++|++|++++|+...         .+...+.+++..+    .+   +.++.+|++|.
T Consensus         2 ~m~vlVTGatG~iG~~l~~~L~~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~   81 (397)
T 1gy8_A            2 HMRVLVCGGAGYIGSHFVRALLRDTNHSVVIVDSLVGTHGKSDHVETRENVARKLQQSDGPKPPWADRYAALEVGDVRNE   81 (397)
T ss_dssp             CCEEEEETTTSHHHHHHHHHHHHHCCCEEEEEECCTTTTTCCTTSCCHHHHHHHHHHSCSSCCTTTTCCCEEEESCTTCH
T ss_pred             CCEEEEECCCCHHHHHHHHHHHHhCCCEEEEEecCCcccccccccchHHHHHHHHHHhhccccccCCceEEEEECCCCCH
Confidence            4589999999999999999999 999999999997654         3344333333321    14   88999999999


Q ss_pred             HHHHHHHHHHHhHcCCccEEEEccccCCcccccccCChHHHHHHHHhhhHHHHHHHHHHhhhhhhcCCeEEEEcCccccc
Q 044010          110 DDCRSLVEETMNHFGRLDHLVNNAGISSVALFEDIVNITDFKQIMNINFWGSVYTTRFAVPHLRYTKGKIVVLSSAASWL  189 (248)
Q Consensus       110 ~~~~~~~~~~~~~~g~id~vv~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~g~iV~isS~~~~~  189 (248)
                      +++.+++++    ++++|+|||+||......     +.+++++.+++|+.++.++++++...   ..+++|++||.+.+.
T Consensus        82 ~~~~~~~~~----~~~~d~vih~A~~~~~~~-----~~~~~~~~~~~Nv~g~~~ll~a~~~~---~~~~iv~~SS~~v~g  149 (397)
T 1gy8_A           82 DFLNGVFTR----HGPIDAVVHMCAFLAVGE-----SVRDPLKYYDNNVVGILRLLQAMLLH---KCDKIIFSSSAAIFG  149 (397)
T ss_dssp             HHHHHHHHH----SCCCCEEEECCCCCCHHH-----HHHCHHHHHHHHHHHHHHHHHHHHHT---TCCEEEEEEEGGGTB
T ss_pred             HHHHHHHHh----cCCCCEEEECCCccCcCc-----chhhHHHHHHHHhHHHHHHHHHHHHh---CCCEEEEECCHHHhC
Confidence            998887763    456999999999764321     23567889999999999999986432   336999999976543


Q ss_pred             cCC------------------CCccchHHHHHHHHHHHHHHHHhCCCeEEEEEecCccccCc
Q 044010          190 TAP------------------RMSFYNASKAALVLFFETLRVELGSDVGVTIVTPGFIESEL  233 (248)
Q Consensus       190 ~~~------------------~~~~Y~~sKaal~~l~~~la~~~~~~i~v~~v~pg~v~T~~  233 (248)
                      ...                  +...|+.||++.+.+++.++.++  +++++.+.||.+..+.
T Consensus       150 ~~~~~~~~~~~~~~~E~~~~~p~~~Y~~sK~~~e~~~~~~~~~~--gi~~~ilRp~~v~G~~  209 (397)
T 1gy8_A          150 NPTMGSVSTNAEPIDINAKKSPESPYGESKLIAERMIRDCAEAY--GIKGICLRYFNACGAH  209 (397)
T ss_dssp             SCCC-----CCCCBCTTSCCBCSSHHHHHHHHHHHHHHHHHHHH--CCEEEEEEECEEECCC
T ss_pred             CCCcccccccccCcCccCCCCCCCchHHHHHHHHHHHHHHHHHH--CCcEEEEeccceeCCC
Confidence            221                  25689999999999999999998  5899999999987654

>1sb8_A WBPP; epimerase, 4-epimerase, UDP-galnac, UDP-GLCNAC, SDR, G SYK, UDP, N-acetylglucosamine, N- acetylgalactosamine, UDP-GLC, isomerase; HET: NAD UD2; 2.10A {Pseudomonas aeruginosa} SCOP: c.2.1.2 PDB: 1sb9_A*

Probab=99.88  E-value=1.9e-21  Score=169.50  Aligned_cols=175  Identities=17%  Similarity=0.148  Sum_probs=138.6

Q ss_pred             CCCCCEEEEcCCCChHHHHHHHHHHHcCCeEEEEeCCcchHHHHHHHHHhh----CCCcEEEEEccCCCHHHHHHHHHHH
Q 044010           44 DVSGKVVIITGASSGIGEHLAYEYARRGACLALCARREKSLEEVADTAREI----GSPDVITIRADVSKVDDCRSLVEET  119 (248)
Q Consensus        44 ~~~~k~~lVtGg~~gIG~aia~~l~~~G~~V~l~~r~~~~~~~~~~~l~~~----~~~~v~~~~~D~~~~~~~~~~~~~~  119 (248)
                      +++++++|||||+|+||.+++++|+++|++|++++|+.....+..+.+.+.    ...++.++.+|++|.+++.++++  
T Consensus        24 ~~~~~~vlVtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~~~~~~~--  101 (352)
T 1sb8_A           24 PAQPKVWLITGVAGFIGSNLLETLLKLDQKVVGLDNFATGHQRNLDEVRSLVSEKQWSNFKFIQGDIRNLDDCNNACA--  101 (352)
T ss_dssp             HHSCCEEEEETTTSHHHHHHHHHHHHTTCEEEEEECCSSCCHHHHHHHHHHSCHHHHTTEEEEECCTTSHHHHHHHHT--
T ss_pred             CccCCeEEEECCCcHHHHHHHHHHHHCCCEEEEEeCCCccchhhHHHHhhhcccccCCceEEEECCCCCHHHHHHHhc--
Confidence            467789999999999999999999999999999999764322222222211    11368899999999998888775  


Q ss_pred             HhHcCCccEEEEccccCCcccccccCChHHHHHHHHhhhHHHHHHHHHHhhhhhhcCCeEEEEcCccccccCC-------
Q 044010          120 MNHFGRLDHLVNNAGISSVALFEDIVNITDFKQIMNINFWGSVYTTRFAVPHLRYTKGKIVVLSSAASWLTAP-------  192 (248)
Q Consensus       120 ~~~~g~id~vv~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~g~iV~isS~~~~~~~~-------  192 (248)
                           ++|+|||+||.....     .+.+++++.+++|+.++.++++++.+.   ..+++|++||...+.+.+       
T Consensus       102 -----~~d~vih~A~~~~~~-----~~~~~~~~~~~~n~~~~~~l~~a~~~~---~~~~~v~~SS~~~~~~~~~~~~~E~  168 (352)
T 1sb8_A          102 -----GVDYVLHQAALGSVP-----RSINDPITSNATNIDGFLNMLIAARDA---KVQSFTYAASSSTYGDHPGLPKVED  168 (352)
T ss_dssp             -----TCSEEEECCSCCCHH-----HHHHCHHHHHHHHTHHHHHHHHHHHHT---TCSEEEEEEEGGGGTTCCCSSBCTT
T ss_pred             -----CCCEEEECCcccCch-----hhhhCHHHHHHHHHHHHHHHHHHHHHc---CCCEEEEeccHHhcCCCCCCCCCCC
Confidence                 799999999975432     123567889999999999999998643   347999999988765432       


Q ss_pred             ----CCccchHHHHHHHHHHHHHHHHhCCCeEEEEEecCccccCccc
Q 044010          193 ----RMSFYNASKAALVLFFETLRVELGSDVGVTIVTPGFIESELTQ  235 (248)
Q Consensus       193 ----~~~~Y~~sKaal~~l~~~la~~~~~~i~v~~v~pg~v~T~~~~  235 (248)
                          +...|+.+|.+.+.+++.++.++  +++++.+.||.+.++...
T Consensus       169 ~~~~~~~~Y~~sK~~~e~~~~~~~~~~--g~~~~ilRp~~v~G~~~~  213 (352)
T 1sb8_A          169 TIGKPLSPYAVTKYVNELYADVFSRCY--GFSTIGLRYFNVFGRRQD  213 (352)
T ss_dssp             CCCCCCSHHHHHHHHHHHHHHHHHHHH--CCCCEEEEECCEECTTCC
T ss_pred             CCCCCCChhHHHHHHHHHHHHHHHHHc--CCCEEEEEECceeCcCCC
Confidence                35689999999999999999887  489999999999887653

>1kew_A RMLB;, DTDP-D-glucose 4,6-dehydratase; rossmann fold, lyase; HET: TYD NAD; 1.80A {Salmonella enterica subsp} SCOP: c.2.1.2 PDB: 1g1a_A* 1keu_A* 1bxk_A*

Probab=99.87  E-value=1.2e-21  Score=170.98  Aligned_cols=172  Identities=17%  Similarity=0.113  Sum_probs=136.3

Q ss_pred             EEEEcCCCChHHHHHHHHHHHc-CCeEEEEeCCc--chHHHHHHHHHhhCCCcEEEEEccCCCHHHHHHHHHHHHhHcCC
Q 044010           49 VVIITGASSGIGEHLAYEYARR-GACLALCARRE--KSLEEVADTAREIGSPDVITIRADVSKVDDCRSLVEETMNHFGR  125 (248)
Q Consensus        49 ~~lVtGg~~gIG~aia~~l~~~-G~~V~l~~r~~--~~~~~~~~~l~~~~~~~v~~~~~D~~~~~~~~~~~~~~~~~~g~  125 (248)
                      ++|||||+|+||.+++++|+++ |++|++++|+.  ...+.. +++..  ..++.++.+|++|.+++.+++++.     +
T Consensus         2 kvlVTGasG~iG~~l~~~L~~~~g~~V~~~~r~~~~~~~~~~-~~~~~--~~~~~~~~~Dl~d~~~~~~~~~~~-----~   73 (361)
T 1kew_A            2 KILITGGAGFIGSAVVRHIIKNTQDTVVNIDKLTYAGNLESL-SDISE--SNRYNFEHADICDSAEITRIFEQY-----Q   73 (361)
T ss_dssp             EEEEESTTSHHHHHHHHHHHHHCSCEEEEEECCCTTCCGGGG-TTTTT--CTTEEEEECCTTCHHHHHHHHHHH-----C
T ss_pred             EEEEECCCchHhHHHHHHHHhcCCCeEEEEecCCCCCchhhh-hhhhc--CCCeEEEECCCCCHHHHHHHHhhc-----C
Confidence            5999999999999999999998 79999999865  222221 11111  237889999999999999988752     7


Q ss_pred             ccEEEEccccCCcccccccCChHHHHHHHHhhhHHHHHHHHHHhhhhhhcC------CeEEEEcCcccccc---------
Q 044010          126 LDHLVNNAGISSVALFEDIVNITDFKQIMNINFWGSVYTTRFAVPHLRYTK------GKIVVLSSAASWLT---------  190 (248)
Q Consensus       126 id~vv~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~------g~iV~isS~~~~~~---------  190 (248)
                      +|+|||+||.....     .+.+++++.+++|+.++.++++++.+.|...+      +++|++||.+.+..         
T Consensus        74 ~d~vih~A~~~~~~-----~~~~~~~~~~~~Nv~g~~~l~~a~~~~~~~v~~~~~~~~~iv~~SS~~v~g~~~~~~~~~~  148 (361)
T 1kew_A           74 PDAVMHLAAESHVD-----RSITGPAAFIETNIVGTYALLEVARKYWSALGEDKKNNFRFHHISTDEVYGDLPHPDEVEN  148 (361)
T ss_dssp             CSEEEECCSCCCHH-----HHHHCTHHHHHHHTHHHHHHHHHHHHHHHTSCHHHHHHCEEEEEEEGGGGCCCCCGGGSCT
T ss_pred             CCEEEECCCCcChh-----hhhhCHHHHHHHHHHHHHHHHHHHHHhccCcccccccCceEEEeCCHHHhCCCcccccccc
Confidence            99999999975421     13356788999999999999999998864322      69999999764321         


Q ss_pred             ------------CCCCccchHHHHHHHHHHHHHHHHhCCCeEEEEEecCccccCccc
Q 044010          191 ------------APRMSFYNASKAALVLFFETLRVELGSDVGVTIVTPGFIESELTQ  235 (248)
Q Consensus       191 ------------~~~~~~Y~~sKaal~~l~~~la~~~~~~i~v~~v~pg~v~T~~~~  235 (248)
                                  .++...|+.||++.+.+++.++.++  +++++.+.||.+.++...
T Consensus       149 ~~~~~~~~E~~~~~~~~~Y~~sK~~~e~~~~~~~~~~--gi~~~~vrp~~v~G~~~~  203 (361)
T 1kew_A          149 SVTLPLFTETTAYAPSSPYSASKASSDHLVRAWRRTY--GLPTIVTNCSNNYGPYHF  203 (361)
T ss_dssp             TSCCCCBCTTSCCCCCSHHHHHHHHHHHHHHHHHHHH--CCCEEEEEECEEESTTCC
T ss_pred             cccCCCCCCCCCCCCCCccHHHHHHHHHHHHHHHHHh--CCcEEEEeeceeECCCCC
Confidence                        2345689999999999999999987  489999999999998753

>2c29_D Dihydroflavonol 4-reductase; flavonoids, short dehydrogenase reductase, NADPH, dihydroquercetin, rossmann fold, oxidoreductase; HET: NAP DQH; 1.81A {Vitis vinifera} PDB: 2iod_A* 2nnl_D* 3bxx_A* 3c1t_A*

Probab=99.87  E-value=2.5e-21  Score=167.64  Aligned_cols=173  Identities=16%  Similarity=0.150  Sum_probs=130.7

Q ss_pred             CCCCEEEEcCCCChHHHHHHHHHHHcCCeEEEEeCCcchHHHHHHHHHhhC--CCcEEEEEccCCCHHHHHHHHHHHHhH
Q 044010           45 VSGKVVIITGASSGIGEHLAYEYARRGACLALCARREKSLEEVADTAREIG--SPDVITIRADVSKVDDCRSLVEETMNH  122 (248)
Q Consensus        45 ~~~k~~lVtGg~~gIG~aia~~l~~~G~~V~l~~r~~~~~~~~~~~l~~~~--~~~v~~~~~D~~~~~~~~~~~~~~~~~  122 (248)
                      .++|++|||||+|+||.+++++|+++|++|+++.|+.+..++..+ +.+..  ..++.++.+|++|.++++++++     
T Consensus         3 ~~~~~vlVTGatGfIG~~l~~~L~~~G~~V~~~~r~~~~~~~~~~-~~~~~~~~~~~~~~~~Dl~d~~~~~~~~~-----   76 (337)
T 2c29_D            3 SQSETVCVTGASGFIGSWLVMRLLERGYTVRATVRDPTNVKKVKH-LLDLPKAETHLTLWKADLADEGSFDEAIK-----   76 (337)
T ss_dssp             ---CEEEETTTTSHHHHHHHHHHHHTTCEEEEEESCTTCHHHHHH-HHTSTTHHHHEEEEECCTTSTTTTHHHHT-----
T ss_pred             CCCCEEEEECCchHHHHHHHHHHHHCCCEEEEEECCcchhHHHHH-HHhcccCCCeEEEEEcCCCCHHHHHHHHc-----
Confidence            468999999999999999999999999999999998765433322 11111  1257889999999998887764     


Q ss_pred             cCCccEEEEccccCCcccccccCChHHHHHHHHhhhHHHHHHHHHHhhhhhhcCCeEEEEcCccccccCC----------
Q 044010          123 FGRLDHLVNNAGISSVALFEDIVNITDFKQIMNINFWGSVYTTRFAVPHLRYTKGKIVVLSSAASWLTAP----------  192 (248)
Q Consensus       123 ~g~id~vv~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~g~iV~isS~~~~~~~~----------  192 (248)
                        ++|+|||+|+....   .   ..+..++.+++|+.++.++++++.+..  ..+++|++||.+++.+.+          
T Consensus        77 --~~d~Vih~A~~~~~---~---~~~~~~~~~~~nv~gt~~ll~a~~~~~--~~~riV~~SS~~~~~~~~~~~~~~~E~~  146 (337)
T 2c29_D           77 --GCTGVFHVATPMDF---E---SKDPENEVIKPTIEGMLGIMKSCAAAK--TVRRLVFTSSAGTVNIQEHQLPVYDESC  146 (337)
T ss_dssp             --TCSEEEECCCCCCS---S---CSSHHHHTHHHHHHHHHHHHHHHHHHS--CCCEEEEECCGGGTSCSSSCCSEECTTC
T ss_pred             --CCCEEEEeccccCC---C---CCChHHHHHHHHHHHHHHHHHHHHhCC--CccEEEEeeeHhhcccCCCCCcccCccc
Confidence              58999999986421   1   113345788999999999999987542  246999999987554321          


Q ss_pred             ------------CCccchHHHHHHHHHHHHHHHHhCCCeEEEEEecCccccCccc
Q 044010          193 ------------RMSFYNASKAALVLFFETLRVELGSDVGVTIVTPGFIESELTQ  235 (248)
Q Consensus       193 ------------~~~~Y~~sKaal~~l~~~la~~~~~~i~v~~v~pg~v~T~~~~  235 (248)
                                  ....|+.||.+.+.+++.++.++  +++++++.||.+.+|...
T Consensus       147 ~~~~~~~~~~~~~~~~Y~~sK~~~E~~~~~~~~~~--gi~~~~lrp~~v~Gp~~~  199 (337)
T 2c29_D          147 WSDMEFCRAKKMTAWMYFVSKTLAEQAAWKYAKEN--NIDFITIIPTLVVGPFIM  199 (337)
T ss_dssp             CCCHHHHHHHCCTTHHHHHHHHHHHHHHHHHHHHH--TCCEEEEEECEEESCCSC
T ss_pred             CCchhhhcccCCccchHHHHHHHHHHHHHHHHHHc--CCcEEEEeCCceECCCCC
Confidence                        22369999999999998887665  489999999999988654

>1ek6_A UDP-galactose 4-epimerase; short-chain dehydrogenase, galactosemia, isomerase; HET: NAI UPG; 1.50A {Homo sapiens} SCOP: c.2.1.2 PDB: 1ek5_A* 1hzj_A* 1i3k_A* 1i3l_A* 1i3m_A* 1i3n_A*

Probab=99.87  E-value=2.7e-21  Score=167.94  Aligned_cols=172  Identities=16%  Similarity=0.145  Sum_probs=133.9

Q ss_pred             CCEEEEcCCCChHHHHHHHHHHHcCCeEEEEeCCcch------HHHHHHHHHhhCCCcEEEEEccCCCHHHHHHHHHHHH
Q 044010           47 GKVVIITGASSGIGEHLAYEYARRGACLALCARREKS------LEEVADTAREIGSPDVITIRADVSKVDDCRSLVEETM  120 (248)
Q Consensus        47 ~k~~lVtGg~~gIG~aia~~l~~~G~~V~l~~r~~~~------~~~~~~~l~~~~~~~v~~~~~D~~~~~~~~~~~~~~~  120 (248)
                      +|++|||||+|+||.+++++|+++|++|++++|+...      ..+..+++.+..+.++.++.+|++|.+++++++++. 
T Consensus         2 ~~~vlVtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~D~~~~~~~~~~~~~~-   80 (348)
T 1ek6_A            2 AEKVLVTGGAGYIGSHTVLELLEAGYLPVVIDNFHNAFRGGGSLPESLRRVQELTGRSVEFEEMDILDQGALQRLFKKY-   80 (348)
T ss_dssp             CSEEEEETTTSHHHHHHHHHHHHTTCCEEEEECSSSSCBCSSSSBHHHHHHHHHHTCCCEEEECCTTCHHHHHHHHHHC-
T ss_pred             CCEEEEECCCCHHHHHHHHHHHHCCCEEEEEecCCcccccccccHHHHHHHHhccCCceEEEECCCCCHHHHHHHHHhc-
Confidence            5799999999999999999999999999999986433      223334444322236889999999999998888752 


Q ss_pred             hHcCCccEEEEccccCCcccccccCChHHHHHHHHhhhHHHHHHHHHHhhhhhhcCCeEEEEcCcccccc----------
Q 044010          121 NHFGRLDHLVNNAGISSVALFEDIVNITDFKQIMNINFWGSVYTTRFAVPHLRYTKGKIVVLSSAASWLT----------  190 (248)
Q Consensus       121 ~~~g~id~vv~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~g~iV~isS~~~~~~----------  190 (248)
                          ++|+|||+||......     +.+++++.+++|+.++.++++++..   ...+++|++||.+.+..          
T Consensus        81 ----~~d~vih~A~~~~~~~-----~~~~~~~~~~~n~~~~~~l~~~~~~---~~~~~iv~~SS~~~~g~~~~~~~~E~~  148 (348)
T 1ek6_A           81 ----SFMAVIHFAGLKAVGE-----SVQKPLDYYRVNLTGTIQLLEIMKA---HGVKNLVFSSSATVYGNPQYLPLDEAH  148 (348)
T ss_dssp             ----CEEEEEECCSCCCHHH-----HHHCHHHHHHHHHHHHHHHHHHHHH---TTCCEEEEEEEGGGGCSCSSSSBCTTS
T ss_pred             ----CCCEEEECCCCcCccc-----hhhchHHHHHHHHHHHHHHHHHHHH---hCCCEEEEECcHHHhCCCCCCCcCCCC
Confidence                7999999999764321     2356778999999999999987642   13379999999776532          


Q ss_pred             --CCCCccchHHHHHHHHHHHHHHHHhCCCeEEEEEecCccccC
Q 044010          191 --APRMSFYNASKAALVLFFETLRVELGSDVGVTIVTPGFIESE  232 (248)
Q Consensus       191 --~~~~~~Y~~sKaal~~l~~~la~~~~~~i~v~~v~pg~v~T~  232 (248)
                        .|....|+.+|.+.+.+++.++.+ ++++++..+.|+.+..+
T Consensus       149 ~~~p~~~~Y~~sK~~~e~~~~~~~~~-~~~~~~~~lR~~~v~G~  191 (348)
T 1ek6_A          149 PTGGCTNPYGKSKFFIEEMIRDLCQA-DKTWNAVLLRYFNPTGA  191 (348)
T ss_dssp             CCCCCSSHHHHHHHHHHHHHHHHHHH-CTTCEEEEEEECEEECC
T ss_pred             CCCCCCCchHHHHHHHHHHHHHHHhc-CCCcceEEEeeccccCC
Confidence              122568999999999999999988 55689999999877655

>3r6d_A NAD-dependent epimerase/dehydratase; structural genomics, PSI-biology, midwest center for structu genomics, MCSG, veillo parvula; HET: MLZ; 1.25A {Veillonella parvula dsm 2008} PDB: 4hng_A 4hnh_A* 3r14_A*

Probab=99.87  E-value=4.2e-21  Score=156.80  Aligned_cols=143  Identities=15%  Similarity=0.072  Sum_probs=115.7

Q ss_pred             CCEEEEcCCCChHHHHHHHHHH-HcCCeEEEEeCCcc-hHHHHHHHHHhhCCCcEEEEEccCCCHHHHHHHHHHHHhHcC
Q 044010           47 GKVVIITGASSGIGEHLAYEYA-RRGACLALCARREK-SLEEVADTAREIGSPDVITIRADVSKVDDCRSLVEETMNHFG  124 (248)
Q Consensus        47 ~k~~lVtGg~~gIG~aia~~l~-~~G~~V~l~~r~~~-~~~~~~~~l~~~~~~~v~~~~~D~~~~~~~~~~~~~~~~~~g  124 (248)
                      .|+++||||+|+||++++++|+ ++|++|++++|+++ +.++..    ... .++.++.+|++|.++++++++       
T Consensus         5 mk~vlVtGasg~iG~~~~~~l~~~~g~~V~~~~r~~~~~~~~~~----~~~-~~~~~~~~D~~d~~~~~~~~~-------   72 (221)
T 3r6d_A            5 YXYITILGAAGQIAQXLTATLLTYTDMHITLYGRQLKTRIPPEI----IDH-ERVTVIEGSFQNPGXLEQAVT-------   72 (221)
T ss_dssp             CSEEEEESTTSHHHHHHHHHHHHHCCCEEEEEESSHHHHSCHHH----HTS-TTEEEEECCTTCHHHHHHHHT-------
T ss_pred             EEEEEEEeCCcHHHHHHHHHHHhcCCceEEEEecCccccchhhc----cCC-CceEEEECCCCCHHHHHHHHc-------
Confidence            3789999999999999999999 89999999999876 444332    122 378999999999999988875       


Q ss_pred             CccEEEEccccCCcccccccCChHHHHHHHHhhhHHHHHHHHHHhhhhhhcC-CeEEEEcCccccccCCCCc--------
Q 044010          125 RLDHLVNNAGISSVALFEDIVNITDFKQIMNINFWGSVYTTRFAVPHLRYTK-GKIVVLSSAASWLTAPRMS--------  195 (248)
Q Consensus       125 ~id~vv~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~-g~iV~isS~~~~~~~~~~~--------  195 (248)
                      ++|++|||||..                    |+.     .+.+++.|++.+ ++||++||..++.+.+...        
T Consensus        73 ~~d~vv~~ag~~--------------------n~~-----~~~~~~~~~~~~~~~iv~iSs~~~~~~~~~~~~~~~~~~~  127 (221)
T 3r6d_A           73 NAEVVFVGAMES--------------------GSD-----MASIVKALSRXNIRRVIGVSMAGLSGEFPVALEKWTFDNL  127 (221)
T ss_dssp             TCSEEEESCCCC--------------------HHH-----HHHHHHHHHHTTCCEEEEEEETTTTSCSCHHHHHHHHHTS
T ss_pred             CCCEEEEcCCCC--------------------Chh-----HHHHHHHHHhcCCCeEEEEeeceecCCCCccccccccccc
Confidence            689999999853                    221     677777776554 7999999988877655433        


Q ss_pred             --cchHHHHHHHHHHHHHHHHhCCCeEEEEEecCccccC
Q 044010          196 --FYNASKAALVLFFETLRVELGSDVGVTIVTPGFIESE  232 (248)
Q Consensus       196 --~Y~~sKaal~~l~~~la~~~~~~i~v~~v~pg~v~T~  232 (248)
                        .|+.+|.+++.+.+.      .++++++|.||++.|+
T Consensus       128 ~~~y~~~K~~~e~~~~~------~~i~~~~vrpg~v~~~  160 (221)
T 3r6d_A          128 PISYVQGERQARNVLRE------SNLNYTILRLTWLYND  160 (221)
T ss_dssp             CHHHHHHHHHHHHHHHH------SCSEEEEEEECEEECC
T ss_pred             ccHHHHHHHHHHHHHHh------CCCCEEEEechhhcCC
Confidence              899999999987753      3599999999999988

>2hrz_A AGR_C_4963P, nucleoside-diphosphate-sugar epimerase; agrobacterium tumefa structural genomics, PSI-2, protein structure initiative; 1.85A {Agrobacterium tumefaciens}

Probab=99.86  E-value=3.4e-21  Score=166.97  Aligned_cols=171  Identities=23%  Similarity=0.198  Sum_probs=135.7

Q ss_pred             cCCCCCEEEEcCCCChHHHHHHHHHHHcC-------CeEEEEeCCcchHHHHHHHHHhhCCCcEEEEEccCCCHHHHHHH
Q 044010           43 EDVSGKVVIITGASSGIGEHLAYEYARRG-------ACLALCARREKSLEEVADTAREIGSPDVITIRADVSKVDDCRSL  115 (248)
Q Consensus        43 ~~~~~k~~lVtGg~~gIG~aia~~l~~~G-------~~V~l~~r~~~~~~~~~~~l~~~~~~~v~~~~~D~~~~~~~~~~  115 (248)
                      ..++++++|||||+|+||.+++++|+++|       ++|++++|+.++...       ....++.++.+|++|.++++++
T Consensus        10 ~~~~~~~vlVtGa~G~iG~~l~~~L~~~g~~~~r~~~~V~~~~r~~~~~~~-------~~~~~~~~~~~Dl~d~~~~~~~   82 (342)
T 2hrz_A           10 LYFQGMHIAIIGAAGMVGRKLTQRLVKDGSLGGKPVEKFTLIDVFQPEAPA-------GFSGAVDARAADLSAPGEAEKL   82 (342)
T ss_dssp             SCCSCEEEEEETTTSHHHHHHHHHHHHHCEETTEEEEEEEEEESSCCCCCT-------TCCSEEEEEECCTTSTTHHHHH
T ss_pred             CCccCCEEEEECCCcHHHHHHHHHHHhcCCcccCCCceEEEEEccCCcccc-------ccCCceeEEEcCCCCHHHHHHH
Confidence            45789999999999999999999999999       899999998653221       1223788999999999998887


Q ss_pred             HHHHHhHcCCccEEEEccccCCcccccccCChHHHHHHHHhhhHHHHHHHHHHhhhhhhc--CCeEEEEcCccccccC-C
Q 044010          116 VEETMNHFGRLDHLVNNAGISSVALFEDIVNITDFKQIMNINFWGSVYTTRFAVPHLRYT--KGKIVVLSSAASWLTA-P  192 (248)
Q Consensus       116 ~~~~~~~~g~id~vv~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~--~g~iV~isS~~~~~~~-~  192 (248)
                      ++      +++|+|||+||....      .+.+++++.+++|+.++.++++++.+...+.  .+++|++||.+.+.+. +
T Consensus        83 ~~------~~~d~vih~A~~~~~------~~~~~~~~~~~~nv~g~~~l~~~~~~~~~~~~~~~~iv~~SS~~~~~~~~~  150 (342)
T 2hrz_A           83 VE------ARPDVIFHLAAIVSG------EAELDFDKGYRINLDGTRYLFDAIRIANGKDGYKPRVVFTSSIAVFGAPLP  150 (342)
T ss_dssp             HH------TCCSEEEECCCCCHH------HHHHCHHHHHHHHTHHHHHHHHHHHHHHHHHCCCCEEEEEEEGGGCCSSCC
T ss_pred             Hh------cCCCEEEECCccCcc------cccccHHHHHHHHHHHHHHHHHHHHhcccccCCCcEEEEeCchHhhCCCCC
Confidence            75      379999999997542      1346788999999999999999987653221  4799999998766543 1


Q ss_pred             ----------CCccchHHHHHHHHHHHHHHHHhCC---CeEEEEEe--cCccccC
Q 044010          193 ----------RMSFYNASKAALVLFFETLRVELGS---DVGVTIVT--PGFIESE  232 (248)
Q Consensus       193 ----------~~~~Y~~sKaal~~l~~~la~~~~~---~i~v~~v~--pg~v~T~  232 (248)
                                +...|+.||.+.+.+++.++.+++-   .+|++.|.  ||...++
T Consensus       151 ~~~~E~~~~~~~~~Y~~sK~~~e~~~~~~~~~~~~~~~~ir~~~v~g~pg~~~~~  205 (342)
T 2hrz_A          151 YPIPDEFHTTPLTSYGTQKAICELLLSDYSRRGFFDGIGIRLPTICIRPGKPNAA  205 (342)
T ss_dssp             SSBCTTCCCCCSSHHHHHHHHHHHHHHHHHHTTSCEEEEEEECEETTCCSSCCCS
T ss_pred             CCcCCCCCCCCcchHHHHHHHHHHHHHHHHHhcCCCceeEEeeeEEecCCCCcch
Confidence                      4678999999999999999887642   27788887  8876554

>1xq6_A Unknown protein; structural genomics, protein structure initiative, CESG, AT5G02240, NADP, center for eukaryotic structural genomics; HET: NAP; 1.80A {Arabidopsis thaliana} SCOP: c.2.1.2 PDB: 1ybm_A* 2q46_A* 2q4b_A*

Probab=99.86  E-value=2e-21  Score=160.95  Aligned_cols=166  Identities=15%  Similarity=0.073  Sum_probs=126.8

Q ss_pred             CCCCEEEEcCCCChHHHHHHHHHHHc--CCeEEEEeCCcchHHHHHHHHHhhCCCcEEEEEccCCCHHHHHHHHHHHHhH
Q 044010           45 VSGKVVIITGASSGIGEHLAYEYARR--GACLALCARREKSLEEVADTAREIGSPDVITIRADVSKVDDCRSLVEETMNH  122 (248)
Q Consensus        45 ~~~k~~lVtGg~~gIG~aia~~l~~~--G~~V~l~~r~~~~~~~~~~~l~~~~~~~v~~~~~D~~~~~~~~~~~~~~~~~  122 (248)
                      +++|+++||||+|+||.+++++|+++  |++|++++|+.++.++    +    ..++.++.+|++|.++++++++     
T Consensus         2 ~~~~~ilVtGasG~iG~~l~~~l~~~~~g~~V~~~~r~~~~~~~----~----~~~~~~~~~D~~d~~~~~~~~~-----   68 (253)
T 1xq6_A            2 ANLPTVLVTGASGRTGQIVYKKLKEGSDKFVAKGLVRSAQGKEK----I----GGEADVFIGDITDADSINPAFQ-----   68 (253)
T ss_dssp             CSCCEEEEESTTSHHHHHHHHHHHHTTTTCEEEEEESCHHHHHH----T----TCCTTEEECCTTSHHHHHHHHT-----
T ss_pred             CCCCEEEEEcCCcHHHHHHHHHHHhcCCCcEEEEEEcCCCchhh----c----CCCeeEEEecCCCHHHHHHHHc-----
Confidence            46789999999999999999999999  8999999998654332    1    2356789999999999888775     


Q ss_pred             cCCccEEEEccccCCcccc------c--ccCChHHHHHHHHhhhHHHHHHHHHHhhhhhhcCCeEEEEcCccccccCCCC
Q 044010          123 FGRLDHLVNNAGISSVALF------E--DIVNITDFKQIMNINFWGSVYTTRFAVPHLRYTKGKIVVLSSAASWLTAPRM  194 (248)
Q Consensus       123 ~g~id~vv~~ag~~~~~~~------~--~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~g~iV~isS~~~~~~~~~~  194 (248)
                        ++|++||+||.......      .  .....+++++.+++|+.++..+++.+.+.   ..+++|++||..+..+.++.
T Consensus        69 --~~d~vi~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~---~~~~iv~~SS~~~~~~~~~~  143 (253)
T 1xq6_A           69 --GIDALVILTSAVPKMKPGFDPTKGGRPEFIFEDGQYPEQVDWIGQKNQIDAAKVA---GVKHIVVVGSMGGTNPDHPL  143 (253)
T ss_dssp             --TCSEEEECCCCCCEECTTCCTTSSCCCCEECCTTCSHHHHTTHHHHHHHHHHHHH---TCSEEEEEEETTTTCTTCGG
T ss_pred             --CCCEEEEeccccccccccccccccccchhhccccccceeeeHHHHHHHHHHHHHc---CCCEEEEEcCccCCCCCCcc
Confidence              59999999997643211      0  00122445678899999999998887532   34799999998876544333


Q ss_pred             cc-----chHHHHHHHHHHHHHHHHhCCCeEEEEEecCccccCcc
Q 044010          195 SF-----YNASKAALVLFFETLRVELGSDVGVTIVTPGFIESELT  234 (248)
Q Consensus       195 ~~-----Y~~sKaal~~l~~~la~~~~~~i~v~~v~pg~v~T~~~  234 (248)
                      ..     |+.+|.+.+.+++.      .+++++++.||.+.++..
T Consensus       144 ~~~~~~~y~~sK~~~e~~~~~------~~i~~~~vrpg~v~~~~~  182 (253)
T 1xq6_A          144 NKLGNGNILVWKRKAEQYLAD------SGTPYTIIRAGGLLDKEG  182 (253)
T ss_dssp             GGGGGCCHHHHHHHHHHHHHT------SSSCEEEEEECEEECSCS
T ss_pred             ccccchhHHHHHHHHHHHHHh------CCCceEEEecceeecCCc
Confidence            33     55699999988753      459999999999999864

>3ruf_A WBGU; rossmann fold, UDP-hexose 4-epimerase, isomerase; HET: NAD UDP; 2.00A {Plesiomonas shigelloides} SCOP: c.2.1.2 PDB: 3ru9_A* 3rud_A* 3rue_A* 3rua_A* 3ruh_A* 3ruc_A* 3ru7_A* 3lu1_A*

Probab=99.86  E-value=6.5e-21  Score=165.80  Aligned_cols=175  Identities=16%  Similarity=0.142  Sum_probs=140.7

Q ss_pred             cCCCCCEEEEcCCCChHHHHHHHHHHHcCCeEEEEeCCcchHHHHHHHHHhhCC----CcEEEEEccCCCHHHHHHHHHH
Q 044010           43 EDVSGKVVIITGASSGIGEHLAYEYARRGACLALCARREKSLEEVADTAREIGS----PDVITIRADVSKVDDCRSLVEE  118 (248)
Q Consensus        43 ~~~~~k~~lVtGg~~gIG~aia~~l~~~G~~V~l~~r~~~~~~~~~~~l~~~~~----~~v~~~~~D~~~~~~~~~~~~~  118 (248)
                      +.+++|++|||||+|+||.+++++|+++|++|++++|+........+.+.....    .++.++.+|++|.+++.++++ 
T Consensus        21 ~~~~~~~vlVtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~~~~~~~-   99 (351)
T 3ruf_A           21 LIFSPKTWLITGVAGFIGSNLLEKLLKLNQVVIGLDNFSTGHQYNLDEVKTLVSTEQWSRFCFIEGDIRDLTTCEQVMK-   99 (351)
T ss_dssp             HHHSCCEEEEETTTSHHHHHHHHHHHHTTCEEEEEECCSSCCHHHHHHHHHTSCHHHHTTEEEEECCTTCHHHHHHHTT-
T ss_pred             CCCCCCeEEEECCCcHHHHHHHHHHHHCCCEEEEEeCCCCCchhhhhhhhhccccccCCceEEEEccCCCHHHHHHHhc-
Confidence            456889999999999999999999999999999999987655555555544321    378999999999998887775 


Q ss_pred             HHhHcCCccEEEEccccCCcccccccCChHHHHHHHHhhhHHHHHHHHHHhhhhhhcCCeEEEEcCccccccCC------
Q 044010          119 TMNHFGRLDHLVNNAGISSVALFEDIVNITDFKQIMNINFWGSVYTTRFAVPHLRYTKGKIVVLSSAASWLTAP------  192 (248)
Q Consensus       119 ~~~~~g~id~vv~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~g~iV~isS~~~~~~~~------  192 (248)
                            ++|+|||+||.....     .+.+++...+++|+.++.++++++...   ..+++|++||...+...+      
T Consensus       100 ------~~d~Vih~A~~~~~~-----~~~~~~~~~~~~nv~~~~~ll~a~~~~---~~~~~v~~SS~~vyg~~~~~~~~E  165 (351)
T 3ruf_A          100 ------GVDHVLHQAALGSVP-----RSIVDPITTNATNITGFLNILHAAKNA---QVQSFTYAASSSTYGDHPALPKVE  165 (351)
T ss_dssp             ------TCSEEEECCCCCCHH-----HHHHCHHHHHHHHTHHHHHHHHHHHHT---TCSEEEEEEEGGGGTTCCCSSBCT
T ss_pred             ------CCCEEEECCccCCcc-----hhhhCHHHHHHHHHHHHHHHHHHHHHc---CCCEEEEEecHHhcCCCCCCCCcc
Confidence                  799999999975432     134567788999999999999987543   236999999987764332      


Q ss_pred             -----CCccchHHHHHHHHHHHHHHHHhCCCeEEEEEecCccccCcc
Q 044010          193 -----RMSFYNASKAALVLFFETLRVELGSDVGVTIVTPGFIESELT  234 (248)
Q Consensus       193 -----~~~~Y~~sKaal~~l~~~la~~~~~~i~v~~v~pg~v~T~~~  234 (248)
                           +...|+.+|.+.+.+++.++.++  ++++..+.||.+..+-.
T Consensus       166 ~~~~~p~~~Y~~sK~~~E~~~~~~~~~~--g~~~~ilRp~~v~G~~~  210 (351)
T 3ruf_A          166 ENIGNPLSPYAVTKYVNEIYAQVYARTY--GFKTIGLRYFNVFGRRQ  210 (351)
T ss_dssp             TCCCCCCSHHHHHHHHHHHHHHHHHHHH--CCCCEEEEECSEESTTC
T ss_pred             CCCCCCCChhHHHHHHHHHHHHHHHHHh--CCCEEEEeeCceeCcCC
Confidence                 24679999999999999999887  47888999998877653

>1t2a_A GDP-mannose 4,6 dehydratase; structural genomics consortium, rossman-fold, short-chain dehydrogenase/reductase, SDR, structural genomics,lyase; HET: NDP GDP; 1.84A {Homo sapiens} SCOP: c.2.1.2

Probab=99.86  E-value=9.6e-21  Score=166.35  Aligned_cols=170  Identities=15%  Similarity=0.044  Sum_probs=128.0

Q ss_pred             CEEEEcCCCChHHHHHHHHHHHcCCeEEEEeCCcch-----HHHHHHHHHhhCCCcEEEEEccCCCHHHHHHHHHHHHhH
Q 044010           48 KVVIITGASSGIGEHLAYEYARRGACLALCARREKS-----LEEVADTAREIGSPDVITIRADVSKVDDCRSLVEETMNH  122 (248)
Q Consensus        48 k~~lVtGg~~gIG~aia~~l~~~G~~V~l~~r~~~~-----~~~~~~~l~~~~~~~v~~~~~D~~~~~~~~~~~~~~~~~  122 (248)
                      |++|||||+|+||.+++++|+++|++|++++|+.+.     .+...+........++.++.+|++|.+++.++++..   
T Consensus        25 ~~vlVtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~Dl~d~~~~~~~~~~~---  101 (375)
T 1t2a_A           25 NVALITGITGQDGSYLAEFLLEKGYEVHGIVRRSSSFNTGRIEHLYKNPQAHIEGNMKLHYGDLTDSTCLVKIINEV---  101 (375)
T ss_dssp             CEEEEETTTSHHHHHHHHHHHHTTCEEEEEECCCSSCCCTTTGGGC---------CEEEEECCTTCHHHHHHHHHHH---
T ss_pred             cEEEEECCCchHHHHHHHHHHHCCCEEEEEECCccccchhhHHHHhhhhccccCCCceEEEccCCCHHHHHHHHHhc---
Confidence            689999999999999999999999999999997643     221111111001236889999999999999988765   


Q ss_pred             cCCccEEEEccccCCcccccccCChHHHHHHHHhhhHHHHHHHHHHhhhhhhcCCeEEEEcCccccccC-----------
Q 044010          123 FGRLDHLVNNAGISSVALFEDIVNITDFKQIMNINFWGSVYTTRFAVPHLRYTKGKIVVLSSAASWLTA-----------  191 (248)
Q Consensus       123 ~g~id~vv~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~g~iV~isS~~~~~~~-----------  191 (248)
                        ++|+|||+||.....     .+.+++++.+++|+.++.++++++.+...+.++++|++||.+.+...           
T Consensus       102 --~~d~vih~A~~~~~~-----~~~~~~~~~~~~N~~g~~~l~~a~~~~~~~~~~~iv~~SS~~~~~~~~~~~~~E~~~~  174 (375)
T 1t2a_A          102 --KPTEIYNLGAQSHVK-----ISFDLAEYTADVDGVGTLRLLDAVKTCGLINSVKFYQASTSELYGKVQEIPQKETTPF  174 (375)
T ss_dssp             --CCSEEEECCSCCCHH-----HHHHSHHHHHHHHTHHHHHHHHHHHHTTCTTTCEEEEEEEGGGTCSCSSSSBCTTSCC
T ss_pred             --CCCEEEECCCccccc-----ccccCHHHHHHHHHHHHHHHHHHHHHhCCCccceEEEecchhhhCCCCCCCCCccCCC
Confidence              699999999975432     12466788999999999999999987643233799999998776421           


Q ss_pred             CCCccchHHHHHHHHHHHHHHHHhCCCeEEEEEecCcc
Q 044010          192 PRMSFYNASKAALVLFFETLRVELGSDVGVTIVTPGFI  229 (248)
Q Consensus       192 ~~~~~Y~~sKaal~~l~~~la~~~~~~i~v~~v~pg~v  229 (248)
                      .+...|+.+|++.+.+++.++.+++  +.+..+.|+.+
T Consensus       175 ~~~~~Y~~sK~~~e~~~~~~~~~~~--~~~~i~r~~~~  210 (375)
T 1t2a_A          175 YPRSPYGAAKLYAYWIVVNFREAYN--LFAVNGILFNH  210 (375)
T ss_dssp             CCCSHHHHHHHHHHHHHHHHHHHHC--CEEEEEEECCE
T ss_pred             CCCChhHHHHHHHHHHHHHHHHHhC--CCEEEEecccc
Confidence            2356899999999999999999875  45555555443

>1db3_A GDP-mannose 4,6-dehydratase; NADP, GDP-fucose, lyase; 2.30A {Escherichia coli} SCOP: c.2.1.2

Probab=99.86  E-value=1.7e-20  Score=164.21  Aligned_cols=161  Identities=20%  Similarity=0.151  Sum_probs=120.7

Q ss_pred             CCEEEEcCCCChHHHHHHHHHHHcCCeEEEEeCCcchHH-HHHHHHHhh---CCCcEEEEEccCCCHHHHHHHHHHHHhH
Q 044010           47 GKVVIITGASSGIGEHLAYEYARRGACLALCARREKSLE-EVADTAREI---GSPDVITIRADVSKVDDCRSLVEETMNH  122 (248)
Q Consensus        47 ~k~~lVtGg~~gIG~aia~~l~~~G~~V~l~~r~~~~~~-~~~~~l~~~---~~~~v~~~~~D~~~~~~~~~~~~~~~~~  122 (248)
                      +|++|||||+|+||.+++++|+++|++|++++|+.+... +..+.+.+.   .+.++.++.+|++|.+++.++++..   
T Consensus         1 m~~vlVtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~~~~~~~~~---   77 (372)
T 1db3_A            1 SKVALITGVTGQDGSYLAEFLLEKGYEVHGIKRRASSFNTERVDHIYQDPHTCNPKFHLHYGDLSDTSNLTRILREV---   77 (372)
T ss_dssp             CCEEEEETTTSHHHHHHHHHHHHTTCEEEEECC---------------------CCEEECCCCSSCHHHHHHHHHHH---
T ss_pred             CCEEEEECCCChHHHHHHHHHHHCCCEEEEEECCCcccchHHHHHHhhccccCCCceEEEECCCCCHHHHHHHHHhc---
Confidence            478999999999999999999999999999999765321 111222111   1236888999999999999988765   


Q ss_pred             cCCccEEEEccccCCcccccccCChHHHHHHHHhhhHHHHHHHHHHhhhhhhcCCeEEEEcCccccccC-----------
Q 044010          123 FGRLDHLVNNAGISSVALFEDIVNITDFKQIMNINFWGSVYTTRFAVPHLRYTKGKIVVLSSAASWLTA-----------  191 (248)
Q Consensus       123 ~g~id~vv~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~g~iV~isS~~~~~~~-----------  191 (248)
                        ++|++||+||.....     .+.++++..+++|+.++.++++++.+...++++++|++||.+.+...           
T Consensus        78 --~~d~vih~A~~~~~~-----~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~iv~~SS~~v~g~~~~~~~~E~~~~  150 (372)
T 1db3_A           78 --QPDEVYNLGAMSHVA-----VSFESPEYTADVDAMGTLRLLEAIRFLGLEKKTRFYQASTSELYGLVQEIPQKETTPF  150 (372)
T ss_dssp             --CCSEEEECCCCCTTT-----TTTSCHHHHHHHHTHHHHHHHHHHHHTTCTTTCEEEEEEEGGGGTTCCSSSBCTTSCC
T ss_pred             --CCCEEEECCcccCcc-----ccccCHHHHHHHHHHHHHHHHHHHHHhCCCCCcEEEEeCChhhhCCCCCCCCCccCCC
Confidence              699999999975432     23356788999999999999999987643334799999998765431           


Q ss_pred             CCCccchHHHHHHHHHHHHHHHHhCC
Q 044010          192 PRMSFYNASKAALVLFFETLRVELGS  217 (248)
Q Consensus       192 ~~~~~Y~~sKaal~~l~~~la~~~~~  217 (248)
                      .+...|+.||++.+.+++.++.+++-
T Consensus       151 ~~~~~Y~~sK~~~e~~~~~~~~~~~~  176 (372)
T 1db3_A          151 YPRSPYAVAKLYAYWITVNYRESYGM  176 (372)
T ss_dssp             CCCSHHHHHHHHHHHHHHHHHHHHCC
T ss_pred             CCCChHHHHHHHHHHHHHHHHHHhCC
Confidence            23568999999999999999998853

>3sxp_A ADP-L-glycero-D-mannoheptose-6-epimerase; rossman fold, NAD binding, isomerase; HET: NAD; 2.55A {Helicobacter pylori}

Probab=99.86  E-value=3.1e-21  Score=168.80  Aligned_cols=170  Identities=17%  Similarity=0.173  Sum_probs=125.2

Q ss_pred             cccCCCCCEEEEcCCCChHHHHHHHHHHH--cCCeEEEEeCCcchHHHHH------HHHHhhCCCcEEEEEccCCCHHHH
Q 044010           41 FSEDVSGKVVIITGASSGIGEHLAYEYAR--RGACLALCARREKSLEEVA------DTAREIGSPDVITIRADVSKVDDC  112 (248)
Q Consensus        41 ~~~~~~~k~~lVtGg~~gIG~aia~~l~~--~G~~V~l~~r~~~~~~~~~------~~l~~~~~~~v~~~~~D~~~~~~~  112 (248)
                      +.+++++|++|||||+|+||.+++++|++  +|++|++++|+........      .......+.++.++.+|++|.+++
T Consensus         4 ~~~~~~~~~vlVTGatG~IG~~l~~~L~~~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~~   83 (362)
T 3sxp_A            4 IDDELENQTILITGGAGFVGSNLAFHFQENHPKAKVVVLDKFRSNTLFSNNRPSSLGHFKNLIGFKGEVIAADINNPLDL   83 (362)
T ss_dssp             SSCCCTTCEEEEETTTSHHHHHHHHHHHHHCTTSEEEEEECCCCC-------CCCCCCGGGGTTCCSEEEECCTTCHHHH
T ss_pred             cchhcCCCEEEEECCCCHHHHHHHHHHHhhCCCCeEEEEECCCccccccccchhhhhhhhhccccCceEEECCCCCHHHH
Confidence            34678999999999999999999999999  8999999999765211100      011112233678999999999988


Q ss_pred             HHHHHHHHhHcCCccEEEEccccCCcccccccCChHHHHHHHHhhhHHHHHHHHHHhhhhhhcCCeEEEEcCccccccCC
Q 044010          113 RSLVEETMNHFGRLDHLVNNAGISSVALFEDIVNITDFKQIMNINFWGSVYTTRFAVPHLRYTKGKIVVLSSAASWLTAP  192 (248)
Q Consensus       113 ~~~~~~~~~~~g~id~vv~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~g~iV~isS~~~~~~~~  192 (248)
                      +++      ...++|+|||+||....       +.++++..+++|+.++.++++++.    +.++++|++||.+.+...+
T Consensus        84 ~~~------~~~~~D~vih~A~~~~~-------~~~~~~~~~~~Nv~gt~~ll~aa~----~~~~~~V~~SS~~vyg~~~  146 (362)
T 3sxp_A           84 RRL------EKLHFDYLFHQAAVSDT-------TMLNQELVMKTNYQAFLNLLEIAR----SKKAKVIYASSAGVYGNTK  146 (362)
T ss_dssp             HHH------TTSCCSEEEECCCCCGG-------GCCCHHHHHHHHTHHHHHHHHHHH----HTTCEEEEEEEGGGGCSCC
T ss_pred             HHh------hccCCCEEEECCccCCc-------cccCHHHHHHHHHHHHHHHHHHHH----HcCCcEEEeCcHHHhCCCC
Confidence            877      23589999999996432       235678899999999999999874    3455699999966543322


Q ss_pred             ----------CCccchHHHHHHHHHHHHHHHHhCCCeEEEEEecCcccc
Q 044010          193 ----------RMSFYNASKAALVLFFETLRVELGSDVGVTIVTPGFIES  231 (248)
Q Consensus       193 ----------~~~~Y~~sKaal~~l~~~la~~~~~~i~v~~v~pg~v~T  231 (248)
                                +...|+.||.+.+.+++.++.+    +++..+.|+.+..
T Consensus       147 ~~~~E~~~~~p~~~Y~~sK~~~E~~~~~~~~~----~~~~~lR~~~v~G  191 (362)
T 3sxp_A          147 APNVVGKNESPENVYGFSKLCMDEFVLSHSND----NVQVGLRYFNVYG  191 (362)
T ss_dssp             SSBCTTSCCCCSSHHHHHHHHHHHHHHHTTTT----SCEEEEEECSEES
T ss_pred             CCCCCCCCCCCCChhHHHHHHHHHHHHHHhcc----CCEEEEEeCceeC
Confidence                      2345999999999999998877    3444455544443

>2p4h_X Vestitone reductase; NADPH-dependent reductase, isoflavonoid, plant protein; 1.40A {Medicago sativa}

Probab=99.85  E-value=5.6e-21  Score=164.04  Aligned_cols=171  Identities=15%  Similarity=0.114  Sum_probs=123.7

Q ss_pred             CCEEEEcCCCChHHHHHHHHHHHcCCeEEEEeC-CcchHHHHHHHHHhhC--CCcEEEEEccCCCHHHHHHHHHHHHhHc
Q 044010           47 GKVVIITGASSGIGEHLAYEYARRGACLALCAR-REKSLEEVADTAREIG--SPDVITIRADVSKVDDCRSLVEETMNHF  123 (248)
Q Consensus        47 ~k~~lVtGg~~gIG~aia~~l~~~G~~V~l~~r-~~~~~~~~~~~l~~~~--~~~v~~~~~D~~~~~~~~~~~~~~~~~~  123 (248)
                      ||++|||||+|+||.+++++|+++|++|+++.| +.+..++. +.+.+..  ..++.++.+|++|.++++++++      
T Consensus         1 ~k~vlVTGatG~iG~~l~~~L~~~G~~V~~~~r~~~~~~~~~-~~~~~~~~~~~~~~~~~~Dl~d~~~~~~~~~------   73 (322)
T 2p4h_X            1 KGRVCVTGGTGFLGSWIIKSLLENGYSVNTTIRADPERKRDV-SFLTNLPGASEKLHFFNADLSNPDSFAAAIE------   73 (322)
T ss_dssp             CCEEEEESTTSHHHHHHHHHHHHTTCEEEEECCCC----CCC-HHHHTSTTHHHHEEECCCCTTCGGGGHHHHT------
T ss_pred             CCEEEEECChhHHHHHHHHHHHHCCCEEEEEEeCCccchhHH-HHHHhhhccCCceEEEecCCCCHHHHHHHHc------
Confidence            689999999999999999999999999999888 54321111 1111111  1257888999999999888775      


Q ss_pred             CCccEEEEccccCCcccccccCChHHHHHHHHhhhHHHHHHHHHHhhhhhhcCCeEEEEcCccccccCCC----------
Q 044010          124 GRLDHLVNNAGISSVALFEDIVNITDFKQIMNINFWGSVYTTRFAVPHLRYTKGKIVVLSSAASWLTAPR----------  193 (248)
Q Consensus       124 g~id~vv~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~g~iV~isS~~~~~~~~~----------  193 (248)
                       ++|+|||+|+...   .   ...+.+++.+++|+.++.++++++.+..  ..+++|++||..++.+.+.          
T Consensus        74 -~~d~vih~A~~~~---~---~~~~~~~~~~~~nv~gt~~l~~aa~~~~--~~~~iV~~SS~~~~~~~~~~~~~~~e~~~  144 (322)
T 2p4h_X           74 -GCVGIFHTASPID---F---AVSEPEEIVTKRTVDGALGILKACVNSK--TVKRFIYTSSGSAVSFNGKDKDVLDESDW  144 (322)
T ss_dssp             -TCSEEEECCCCC--------------CHHHHHHHHHHHHHHHHHTTCS--SCCEEEEEEEGGGTSCSSSCCSEECTTCC
T ss_pred             -CCCEEEEcCCccc---C---CCCChHHHHHHHHHHHHHHHHHHHHhcC--CccEEEEeccHHHcccCCCCCeecCCccc
Confidence             5899999996431   1   1112245689999999999999987542  3469999999875543211          


Q ss_pred             -----------C-ccchHHHHHHHHHHHHHHHHhCCCeEEEEEecCccccCccc
Q 044010          194 -----------M-SFYNASKAALVLFFETLRVELGSDVGVTIVTPGFIESELTQ  235 (248)
Q Consensus       194 -----------~-~~Y~~sKaal~~l~~~la~~~~~~i~v~~v~pg~v~T~~~~  235 (248)
                                 . ..|+.||.+.+.+++.++.+.  +++++++.||.+.+++..
T Consensus       145 ~~~~~~~~~~p~~~~Y~~sK~~~e~~~~~~~~~~--gi~~~~lrp~~v~g~~~~  196 (322)
T 2p4h_X          145 SDVDLLRSVKPFGWNYAVSKTLAEKAVLEFGEQN--GIDVVTLILPFIVGRFVC  196 (322)
T ss_dssp             CCHHHHHHHCCTTHHHHHHHHHHHHHHHHHHHHT--TCCEEEEEECEEESCCCS
T ss_pred             cchhhhcccCcccccHHHHHHHHHHHHHHHHHhc--CCcEEEEcCCceECCCCC
Confidence                       1 169999999888887776654  599999999999998754

>1oc2_A DTDP-glucose 4,6-dehydratase; lyase, NADH, rhamnose; HET: TDX NAD; 1.5A {Streptococcus suis} SCOP: c.2.1.2 PDB: 1ker_A* 1ket_A* 1kep_A*

Probab=99.85  E-value=1.4e-20  Score=163.35  Aligned_cols=168  Identities=17%  Similarity=0.134  Sum_probs=131.8

Q ss_pred             CEEEEcCCCChHHHHHHHHHHHc--CCeEEEEeCCcchHHHHHHHHHhhCCCcEEEEEccCCCHHHHHHHHHHHHhHcCC
Q 044010           48 KVVIITGASSGIGEHLAYEYARR--GACLALCARREKSLEEVADTAREIGSPDVITIRADVSKVDDCRSLVEETMNHFGR  125 (248)
Q Consensus        48 k~~lVtGg~~gIG~aia~~l~~~--G~~V~l~~r~~~~~~~~~~~l~~~~~~~v~~~~~D~~~~~~~~~~~~~~~~~~g~  125 (248)
                      |++|||||+|+||.+++++|+++  |++|++++|+.....  .+.+......++.++.+|++|.+++.++++       .
T Consensus         5 ~~vlVTGatG~iG~~l~~~L~~~~~g~~V~~~~r~~~~~~--~~~~~~~~~~~~~~~~~Dl~d~~~~~~~~~-------~   75 (348)
T 1oc2_A            5 KNIIVTGGAGFIGSNFVHYVYNNHPDVHVTVLDKLTYAGN--KANLEAILGDRVELVVGDIADAELVDKLAA-------K   75 (348)
T ss_dssp             SEEEEETTTSHHHHHHHHHHHHHCTTCEEEEEECCCTTCC--GGGTGGGCSSSEEEEECCTTCHHHHHHHHT-------T
T ss_pred             cEEEEeCCccHHHHHHHHHHHHhCCCCEEEEEeCCCCCCC--hhHHhhhccCCeEEEECCCCCHHHHHHHhh-------c
Confidence            68999999999999999999999  899999999653110  011122222478899999999998887775       4


Q ss_pred             ccEEEEccccCCcccccccCChHHHHHHHHhhhHHHHHHHHHHhhhhhhcCCeEEEEcCcccccc---------------
Q 044010          126 LDHLVNNAGISSVALFEDIVNITDFKQIMNINFWGSVYTTRFAVPHLRYTKGKIVVLSSAASWLT---------------  190 (248)
Q Consensus       126 id~vv~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~g~iV~isS~~~~~~---------------  190 (248)
                      +|+|||+||.....     .+.+++++.+++|+.++.++++++.+.    ++++|++||...+..               
T Consensus        76 ~d~vih~A~~~~~~-----~~~~~~~~~~~~Nv~g~~~l~~a~~~~----~~~~v~~SS~~vyg~~~~~~~~~~~~~~~~  146 (348)
T 1oc2_A           76 ADAIVHYAAESHND-----NSLNDPSPFIHTNFIGTYTLLEAARKY----DIRFHHVSTDEVYGDLPLREDLPGHGEGPG  146 (348)
T ss_dssp             CSEEEECCSCCCHH-----HHHHCCHHHHHHHTHHHHHHHHHHHHH----TCEEEEEEEGGGGCCBCCGGGSTTTTCSTT
T ss_pred             CCEEEECCcccCcc-----chhhCHHHHHHHHHHHHHHHHHHHHHh----CCeEEEecccceeCCCcccccccccccccC
Confidence            69999999975421     123556788999999999999998754    349999999765421               


Q ss_pred             --------CCCCccchHHHHHHHHHHHHHHHHhCCCeEEEEEecCccccCccc
Q 044010          191 --------APRMSFYNASKAALVLFFETLRVELGSDVGVTIVTPGFIESELTQ  235 (248)
Q Consensus       191 --------~~~~~~Y~~sKaal~~l~~~la~~~~~~i~v~~v~pg~v~T~~~~  235 (248)
                              .++...|+.+|.+.+.+++.++.++  +++++.+.||.+.++...
T Consensus       147 ~~~~E~~~~~~~~~Y~~sK~~~e~~~~~~~~~~--gi~~~ilrp~~v~G~~~~  197 (348)
T 1oc2_A          147 EKFTAETNYNPSSPYSSTKAASDLIVKAWVRSF--GVKATISNCSNNYGPYQH  197 (348)
T ss_dssp             SSBCTTSCCCCCSHHHHHHHHHHHHHHHHHHHH--CCEEEEEEECCEESTTCC
T ss_pred             CCcCCCCCCCCCCccHHHHHHHHHHHHHHHHHh--CCCEEEEeeceeeCCCCC
Confidence                    2345689999999999999999887  489999999999887753

>2p5y_A UDP-glucose 4-epimerase; TTHA0591, structural genomics, PSI; HET: NAD; 1.92A {Thermus thermophilus HB8} PDB: 2p5u_A*

Probab=99.85  E-value=7.3e-21  Score=162.93  Aligned_cols=164  Identities=21%  Similarity=0.218  Sum_probs=129.0

Q ss_pred             EEEEcCCCChHHHHHHHHHHHcCCeEEEEeCCcchHHHHHHHHHhhCCCcEEEEEccCCCHHHHHHHHHHHHhHcCCccE
Q 044010           49 VVIITGASSGIGEHLAYEYARRGACLALCARREKSLEEVADTAREIGSPDVITIRADVSKVDDCRSLVEETMNHFGRLDH  128 (248)
Q Consensus        49 ~~lVtGg~~gIG~aia~~l~~~G~~V~l~~r~~~~~~~~~~~l~~~~~~~v~~~~~D~~~~~~~~~~~~~~~~~~g~id~  128 (248)
                      ++|||||+|+||.+++++|+++|++|++++|.......   .+   . .++.++.+|++|.+++++++++.     ++|+
T Consensus         2 ~vlVTGatG~iG~~l~~~L~~~G~~V~~~~r~~~~~~~---~~---~-~~~~~~~~Dl~~~~~~~~~~~~~-----~~d~   69 (311)
T 2p5y_A            2 RVLVTGGAGFIGSHIVEDLLARGLEVAVLDNLATGKRE---NV---P-KGVPFFRVDLRDKEGVERAFREF-----RPTH   69 (311)
T ss_dssp             EEEEETTTSHHHHHHHHHHHTTTCEEEEECCCSSCCGG---GS---C-TTCCEECCCTTCHHHHHHHHHHH-----CCSE
T ss_pred             EEEEEeCCcHHHHHHHHHHHHCCCEEEEEECCCcCchh---hc---c-cCeEEEECCCCCHHHHHHHHHhc-----CCCE
Confidence            69999999999999999999999999999985432111   11   1 25678899999999999888752     7999


Q ss_pred             EEEccccCCcccccccCChHHHHHHHHhhhHHHHHHHHHHhhhhhhcCCeEEEEcCccccccC-------------CCCc
Q 044010          129 LVNNAGISSVALFEDIVNITDFKQIMNINFWGSVYTTRFAVPHLRYTKGKIVVLSSAASWLTA-------------PRMS  195 (248)
Q Consensus       129 vv~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~g~iV~isS~~~~~~~-------------~~~~  195 (248)
                      +||+||.....     .+.++++..+++|+.++.++++++...   ..+++|++||.++.++.             .+..
T Consensus        70 vi~~a~~~~~~-----~~~~~~~~~~~~N~~g~~~l~~a~~~~---~~~~iv~~SS~~~~~g~~~~~~~~~E~~~~~~~~  141 (311)
T 2p5y_A           70 VSHQAAQASVK-----VSVEDPVLDFEVNLLGGLNLLEACRQY---GVEKLVFASTGGAIYGEVPEGERAEETWPPRPKS  141 (311)
T ss_dssp             EEECCSCCCHH-----HHHHCHHHHHHHHTHHHHHHHHHHHHT---TCSEEEEEEEHHHHHCCCCTTCCBCTTSCCCCCS
T ss_pred             EEECccccCch-----hhhhCHHHHHHHHHHHHHHHHHHHHHh---CCCEEEEeCCChhhcCCCCCCCCcCCCCCCCCCC
Confidence            99999975432     134667889999999999999987532   33699999998222211             2356


Q ss_pred             cchHHHHHHHHHHHHHHHHhCCCeEEEEEecCccccCcc
Q 044010          196 FYNASKAALVLFFETLRVELGSDVGVTIVTPGFIESELT  234 (248)
Q Consensus       196 ~Y~~sKaal~~l~~~la~~~~~~i~v~~v~pg~v~T~~~  234 (248)
                      .|+.||++.+.+++.++.++  +++++.+.||.+.+|..
T Consensus       142 ~Y~~sK~~~e~~~~~~~~~~--~~~~~~lrp~~v~Gp~~  178 (311)
T 2p5y_A          142 PYAASKAAFEHYLSVYGQSY--GLKWVSLRYGNVYGPRQ  178 (311)
T ss_dssp             HHHHHHHHHHHHHHHHHHHH--CCCEEEEEECEEECTTC
T ss_pred             hHHHHHHHHHHHHHHHHHHc--CCCEEEEeeccccCcCC
Confidence            89999999999999999887  48999999999988764

>1udb_A Epimerase, UDP-galactose-4-epimerase; isomerase; HET: NAD UFG; 1.65A {Escherichia coli} SCOP: c.2.1.2 PDB: 1lrj_A* 1nai_A* 1uda_A* 1nah_A* 1xel_A* 1kvq_A* 1kvs_A* 1udc_A* 2udp_A* 1a9z_A* 1kvt_A* 1kvr_A* 1lrk_A* 1lrl_A* 1kvu_A* 1a9y_A*

Probab=99.85  E-value=3.5e-20  Score=160.36  Aligned_cols=167  Identities=16%  Similarity=0.183  Sum_probs=124.2

Q ss_pred             EEEEcCCCChHHHHHHHHHHHcCCeEEEEeCCcchHHHHHHHHHhhCCCcEEEEEccCCCHHHHHHHHHHHHhHcCCccE
Q 044010           49 VVIITGASSGIGEHLAYEYARRGACLALCARREKSLEEVADTAREIGSPDVITIRADVSKVDDCRSLVEETMNHFGRLDH  128 (248)
Q Consensus        49 ~~lVtGg~~gIG~aia~~l~~~G~~V~l~~r~~~~~~~~~~~l~~~~~~~v~~~~~D~~~~~~~~~~~~~~~~~~g~id~  128 (248)
                      ++|||||+|+||.+++++|+++|++|++++|......+..+.+.+..+.++.++.+|++|.++++++++..     ++|+
T Consensus         2 ~vlVTGatG~iG~~l~~~L~~~G~~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~-----~~D~   76 (338)
T 1udb_A            2 RVLVTGGSGYIGSHTCVQLLQNGHDVIILDNLCNSKRSVLPVIERLGGKHPTFVEGDIRNEALMTEILHDH-----AIDT   76 (338)
T ss_dssp             EEEEETTTSHHHHHHHHHHHHTTCEEEEEECCSSCCTTHHHHHHHHHTSCCEEEECCTTCHHHHHHHHHHT-----TCSE
T ss_pred             EEEEECCCCHHHHHHHHHHHHCCCEEEEEecCCCcchhHHHHHHhhcCCcceEEEccCCCHHHHHHHhhcc-----CCCE
Confidence            68999999999999999999999999999875432222223333322236788999999999998887652     6999


Q ss_pred             EEEccccCCcccccccCChHHHHHHHHhhhHHHHHHHHHHhhhhhhcCCeEEEEcCcccccc-----------C-CCCcc
Q 044010          129 LVNNAGISSVALFEDIVNITDFKQIMNINFWGSVYTTRFAVPHLRYTKGKIVVLSSAASWLT-----------A-PRMSF  196 (248)
Q Consensus       129 vv~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~g~iV~isS~~~~~~-----------~-~~~~~  196 (248)
                      |||+||......     ..+++.+.+++|+.++.++++++..   ...+++|++||.+.+..           . +....
T Consensus        77 vih~A~~~~~~~-----~~~~~~~~~~~n~~~~~~l~~~~~~---~~~~~iv~~SS~~~~g~~~~~~~~e~~~~~~~~~~  148 (338)
T 1udb_A           77 VIHFAGLKAVGE-----SVQKPLEYYDNNVNGTLRLISAMRA---ANVKNFIFSSSATVYGDNPKIPYVESFPTGTPQSP  148 (338)
T ss_dssp             EEECCSCCCHHH-----HHHCHHHHHHHHHHHHHHHHHHHHH---HTCCEEEEEEEGGGGCSCCSSSBCTTSCCCCCSSH
T ss_pred             EEECCccCcccc-----chhcHHHHHHHHHHHHHHHHHHHHh---cCCCeEEEEccHHHhCCCCCCCcCcccCCCCCCCh
Confidence            999999754321     2244567899999999999887542   23479999999775431           1 23568


Q ss_pred             chHHHHHHHHHHHHHHHHhCCCeEEEEEecCcc
Q 044010          197 YNASKAALVLFFETLRVELGSDVGVTIVTPGFI  229 (248)
Q Consensus       197 Y~~sKaal~~l~~~la~~~~~~i~v~~v~pg~v  229 (248)
                      |+.||++.+.+++.++.++ +++++..+.|+.+
T Consensus       149 Y~~sK~~~e~~~~~~~~~~-~~~~~~ilR~~~v  180 (338)
T 1udb_A          149 YGKSKLMVEQILTDLQKAQ-PDWSIALLRYFNP  180 (338)
T ss_dssp             HHHHHHHHHHHHHHHHHHS-TTCEEEEEEECEE
T ss_pred             HHHHHHHHHHHHHHHHHhc-CCCceEEEeecee
Confidence            9999999999999999885 3477777766444

>4id9_A Short-chain dehydrogenase/reductase; putative dehydrogenase, enzyme function initiative, EFI, STR genomics, oxidoreductase; HET: NAD; 1.60A {Agrobacterium fabrum} PDB: 4idg_A*

Probab=99.84  E-value=4.5e-20  Score=160.20  Aligned_cols=159  Identities=11%  Similarity=0.052  Sum_probs=126.3

Q ss_pred             ccccCCCCCEEEEcCCCChHHHHHHHHHHHcCCeEEEEeCCcchHHHHHHHHHhhCCCcEEEEEccCCCHHHHHHHHHHH
Q 044010           40 IFSEDVSGKVVIITGASSGIGEHLAYEYARRGACLALCARREKSLEEVADTAREIGSPDVITIRADVSKVDDCRSLVEET  119 (248)
Q Consensus        40 ~~~~~~~~k~~lVtGg~~gIG~aia~~l~~~G~~V~l~~r~~~~~~~~~~~l~~~~~~~v~~~~~D~~~~~~~~~~~~~~  119 (248)
                      ....+.++|++|||||+|+||.+++++|+++|++|++++|+.+.             .++.++.+|++|.+++.++++  
T Consensus        12 ~~~~~~~~~~vlVtGatG~iG~~l~~~L~~~G~~V~~~~r~~~~-------------~~~~~~~~Dl~d~~~~~~~~~--   76 (347)
T 4id9_A           12 SGLVPRGSHMILVTGSAGRVGRAVVAALRTQGRTVRGFDLRPSG-------------TGGEEVVGSLEDGQALSDAIM--   76 (347)
T ss_dssp             ---------CEEEETTTSHHHHHHHHHHHHTTCCEEEEESSCCS-------------SCCSEEESCTTCHHHHHHHHT--
T ss_pred             CcccccCCCEEEEECCCChHHHHHHHHHHhCCCEEEEEeCCCCC-------------CCccEEecCcCCHHHHHHHHh--
Confidence            33457889999999999999999999999999999999998764             257789999999999887775  


Q ss_pred             HhHcCCccEEEEccccCCcccccccCChHHHHHHHHhhhHHHHHHHHHHhhhhhhcCCeEEEEcCcccccc---------
Q 044010          120 MNHFGRLDHLVNNAGISSVALFEDIVNITDFKQIMNINFWGSVYTTRFAVPHLRYTKGKIVVLSSAASWLT---------  190 (248)
Q Consensus       120 ~~~~g~id~vv~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~g~iV~isS~~~~~~---------  190 (248)
                           ++|+|||+|+....       +.++++..+++|+.++.++++++.+.   ..+++|++||...+..         
T Consensus        77 -----~~d~vih~A~~~~~-------~~~~~~~~~~~nv~~~~~ll~a~~~~---~~~~~V~~SS~~vyg~~~~~~~~~~  141 (347)
T 4id9_A           77 -----GVSAVLHLGAFMSW-------APADRDRMFAVNVEGTRRLLDAASAA---GVRRFVFASSGEVYPENRPEFLPVT  141 (347)
T ss_dssp             -----TCSEEEECCCCCCS-------SGGGHHHHHHHHTHHHHHHHHHHHHT---TCSEEEEEEEGGGTTTTSCSSSSBC
T ss_pred             -----CCCEEEECCcccCc-------chhhHHHHHHHHHHHHHHHHHHHHHc---CCCeEEEECCHHHhCCCCCCCCCcC
Confidence                 79999999997543       23445899999999999999987542   3469999999765533         


Q ss_pred             ----CCCCccchHHHHHHHHHHHHHHHHhCCCeEEEEEecCccc
Q 044010          191 ----APRMSFYNASKAALVLFFETLRVELGSDVGVTIVTPGFIE  230 (248)
Q Consensus       191 ----~~~~~~Y~~sKaal~~l~~~la~~~~~~i~v~~v~pg~v~  230 (248)
                          ..+...|+.+|.+.+.+++.++.+.  ++++..+.|+.+.
T Consensus       142 E~~~~~~~~~Y~~sK~~~E~~~~~~~~~~--~~~~~ilRp~~v~  183 (347)
T 4id9_A          142 EDHPLCPNSPYGLTKLLGEELVRFHQRSG--AMETVILRFSHTQ  183 (347)
T ss_dssp             TTSCCCCCSHHHHHHHHHHHHHHHHHHHS--SSEEEEEEECEEE
T ss_pred             CCCCCCCCChHHHHHHHHHHHHHHHHHhc--CCceEEEccceEe
Confidence                2345679999999999999999886  5899999999887

>3ay3_A NAD-dependent epimerase/dehydratase; glucuronic acid dehydrogeanse, oxidoreductase; 2.10A {Chromohalobacter salexigens}

Probab=99.84  E-value=6.1e-21  Score=160.17  Aligned_cols=154  Identities=18%  Similarity=0.191  Sum_probs=126.2

Q ss_pred             CEEEEcCCCChHHHHHHHHHHHcCCeEEEEeCCcchHHHHHHHHHhhCCCcEEEEEccCCCHHHHHHHHHHHHhHcCCcc
Q 044010           48 KVVIITGASSGIGEHLAYEYARRGACLALCARREKSLEEVADTAREIGSPDVITIRADVSKVDDCRSLVEETMNHFGRLD  127 (248)
Q Consensus        48 k~~lVtGg~~gIG~aia~~l~~~G~~V~l~~r~~~~~~~~~~~l~~~~~~~v~~~~~D~~~~~~~~~~~~~~~~~~g~id  127 (248)
                      |++|||||+|+||.+++++|+++|++|++++|+..+..         . .++.++.+|++|.+++.++++       ++|
T Consensus         3 ~~ilVtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~---------~-~~~~~~~~Dl~d~~~~~~~~~-------~~d   65 (267)
T 3ay3_A            3 NRLLVTGAAGGVGSAIRPHLGTLAHEVRLSDIVDLGAA---------E-AHEEIVACDLADAQAVHDLVK-------DCD   65 (267)
T ss_dssp             EEEEEESTTSHHHHHHGGGGGGTEEEEEECCSSCCCCC---------C-TTEEECCCCTTCHHHHHHHHT-------TCS
T ss_pred             ceEEEECCCCHHHHHHHHHHHhCCCEEEEEeCCCcccc---------C-CCccEEEccCCCHHHHHHHHc-------CCC
Confidence            68999999999999999999999999999999875311         1 257889999999998888765       599


Q ss_pred             EEEEccccCCcccccccCChHHHHHHHHhhhHHHHHHHHHHhhhhhhcCCeEEEEcCccccccCC------------CCc
Q 044010          128 HLVNNAGISSVALFEDIVNITDFKQIMNINFWGSVYTTRFAVPHLRYTKGKIVVLSSAASWLTAP------------RMS  195 (248)
Q Consensus       128 ~vv~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~g~iV~isS~~~~~~~~------------~~~  195 (248)
                      ++||+||...         .+++++.+++|+.++.++++++.+.   ..+++|++||..++...+            +..
T Consensus        66 ~vi~~a~~~~---------~~~~~~~~~~n~~~~~~l~~a~~~~---~~~~iv~~SS~~~~~~~~~~~~~~E~~~~~~~~  133 (267)
T 3ay3_A           66 GIIHLGGVSV---------ERPWNDILQANIIGAYNLYEAARNL---GKPRIVFASSNHTIGYYPRTTRIDTEVPRRPDS  133 (267)
T ss_dssp             EEEECCSCCS---------CCCHHHHHHHTHHHHHHHHHHHHHT---TCCEEEEEEEGGGSTTSBTTSCBCTTSCCCCCS
T ss_pred             EEEECCcCCC---------CCCHHHHHHHHHHHHHHHHHHHHHh---CCCEEEEeCCHHHhCCCCCCCCCCCCCCCCCCC
Confidence            9999999752         1345788999999999999987642   347999999987765433            346


Q ss_pred             cchHHHHHHHHHHHHHHHHhCCCeEEEEEecCcc-ccC
Q 044010          196 FYNASKAALVLFFETLRVELGSDVGVTIVTPGFI-ESE  232 (248)
Q Consensus       196 ~Y~~sKaal~~l~~~la~~~~~~i~v~~v~pg~v-~T~  232 (248)
                      .|+.+|++.+.+++.++.+.  +++++.+.||.+ .++
T Consensus       134 ~Y~~sK~~~e~~~~~~~~~~--gi~~~~lrp~~v~~~~  169 (267)
T 3ay3_A          134 LYGLSKCFGEDLASLYYHKF--DIETLNIRIGSCFPKP  169 (267)
T ss_dssp             HHHHHHHHHHHHHHHHHHTT--CCCEEEEEECBCSSSC
T ss_pred             hHHHHHHHHHHHHHHHHHHc--CCCEEEEeceeecCCC
Confidence            89999999999999987654  589999999998 444

>2x4g_A Nucleoside-diphosphate-sugar epimerase; isomerase; 2.65A {Pseudomonas aeruginosa}

Probab=99.84  E-value=2.8e-20  Score=160.93  Aligned_cols=160  Identities=18%  Similarity=0.133  Sum_probs=125.4

Q ss_pred             CEEEEcCCCChHHHHHHHHHHHcCCeEEEEeCCcchHHHHHHHHHhhCCCcEEEEEccCCCHHHHHHHHHHHHhHcCCcc
Q 044010           48 KVVIITGASSGIGEHLAYEYARRGACLALCARREKSLEEVADTAREIGSPDVITIRADVSKVDDCRSLVEETMNHFGRLD  127 (248)
Q Consensus        48 k~~lVtGg~~gIG~aia~~l~~~G~~V~l~~r~~~~~~~~~~~l~~~~~~~v~~~~~D~~~~~~~~~~~~~~~~~~g~id  127 (248)
                      .++|||||+|+||.+++++|+++|++|++++|+.++.+.    +..   .++.++.+|++|.+++.++++       ++|
T Consensus        14 M~ilVtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~----l~~---~~~~~~~~Dl~d~~~~~~~~~-------~~d   79 (342)
T 2x4g_A           14 VKYAVLGATGLLGHHAARAIRAAGHDLVLIHRPSSQIQR----LAY---LEPECRVAEMLDHAGLERALR-------GLD   79 (342)
T ss_dssp             CEEEEESTTSHHHHHHHHHHHHTTCEEEEEECTTSCGGG----GGG---GCCEEEECCTTCHHHHHHHTT-------TCS
T ss_pred             CEEEEECCCcHHHHHHHHHHHHCCCEEEEEecChHhhhh----hcc---CCeEEEEecCCCHHHHHHHHc-------CCC
Confidence            389999999999999999999999999999998765432    111   257889999999998887764       699


Q ss_pred             EEEEccccCCcccccccCChHHHHHHHHhhhHHHHHHHHHHhhhhhhcCCeEEEEcCccccccCCC--------------
Q 044010          128 HLVNNAGISSVALFEDIVNITDFKQIMNINFWGSVYTTRFAVPHLRYTKGKIVVLSSAASWLTAPR--------------  193 (248)
Q Consensus       128 ~vv~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~g~iV~isS~~~~~~~~~--------------  193 (248)
                      +|||+||....       +.+++++.+++|+.++.++++++.+.   ..+++|++||...+.+.+.              
T Consensus        80 ~vih~a~~~~~-------~~~~~~~~~~~n~~~~~~l~~a~~~~---~~~~~v~~SS~~~~~~~~~~~~~~E~~~~~p~~  149 (342)
T 2x4g_A           80 GVIFSAGYYPS-------RPRRWQEEVASALGQTNPFYAACLQA---RVPRILYVGSAYAMPRHPQGLPGHEGLFYDSLP  149 (342)
T ss_dssp             EEEEC-------------------CHHHHHHHHHHHHHHHHHHH---TCSCEEEECCGGGSCCCTTSSCBCTTCCCSSCC
T ss_pred             EEEECCccCcC-------CCCCHHHHHHHHHHHHHHHHHHHHHc---CCCeEEEECCHHhhCcCCCCCCCCCCCCCCccc
Confidence            99999996531       23567889999999999999998753   3479999999887655443              


Q ss_pred             --CccchHHHHHHHHHHHHHHHHhCCCeEEEEEecCccccCcc
Q 044010          194 --MSFYNASKAALVLFFETLRVELGSDVGVTIVTPGFIESELT  234 (248)
Q Consensus       194 --~~~Y~~sKaal~~l~~~la~~~~~~i~v~~v~pg~v~T~~~  234 (248)
                        ...|+.+|.+.+.+++.++.+   +++++.+.||.+.++..
T Consensus       150 ~~~~~Y~~sK~~~e~~~~~~~~~---g~~~~ilrp~~v~g~~~  189 (342)
T 2x4g_A          150 SGKSSYVLCKWALDEQAREQARN---GLPVVIGIPGMVLGELD  189 (342)
T ss_dssp             TTSCHHHHHHHHHHHHHHHHHHT---TCCEEEEEECEEECSCC
T ss_pred             cccChHHHHHHHHHHHHHHHhhc---CCcEEEEeCCceECCCC
Confidence              678999999999999999874   58999999999998765

>1n7h_A GDP-D-mannose-4,6-dehydratase; rossmann fold, SDR, short-chain dehydrogenase/reductase, LYA; HET: NDP GDP; 1.80A {Arabidopsis thaliana} SCOP: c.2.1.2 PDB: 1n7g_A*

Probab=99.84  E-value=6.2e-20  Score=161.47  Aligned_cols=172  Identities=19%  Similarity=0.113  Sum_probs=130.1

Q ss_pred             CEEEEcCCCChHHHHHHHHHHHcCCeEEEEeCCcch-----HHHHHHHHHhhCCCcEEEEEccCCCHHHHHHHHHHHHhH
Q 044010           48 KVVIITGASSGIGEHLAYEYARRGACLALCARREKS-----LEEVADTAREIGSPDVITIRADVSKVDDCRSLVEETMNH  122 (248)
Q Consensus        48 k~~lVtGg~~gIG~aia~~l~~~G~~V~l~~r~~~~-----~~~~~~~l~~~~~~~v~~~~~D~~~~~~~~~~~~~~~~~  122 (248)
                      |++|||||+|+||.+++++|+++|++|++++|+.++     .+...+.+...+..++.++.+|++|.+++.++++.+   
T Consensus        29 k~vlVtGatG~IG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~~~~~~~~~---  105 (381)
T 1n7h_A           29 KIALITGITGQDGSYLTEFLLGKGYEVHGLIRRSSNFNTQRINHIYIDPHNVNKALMKLHYADLTDASSLRRWIDVI---  105 (381)
T ss_dssp             CEEEEETTTSHHHHHHHHHHHHTTCEEEEEECCCSSCCCTTTTTTC--------CCEEEEECCTTCHHHHHHHHHHH---
T ss_pred             CeEEEEcCCchHHHHHHHHHHHCCCEEEEEecCCccccchhhhhhhhccccccccceEEEECCCCCHHHHHHHHHhc---
Confidence            789999999999999999999999999999997653     222211111111116788999999999999988765   


Q ss_pred             cCCccEEEEccccCCcccccccCChHHHHHHHHhhhHHHHHHHHHHhhhhhh--cCCeEEEEcCcccccc----------
Q 044010          123 FGRLDHLVNNAGISSVALFEDIVNITDFKQIMNINFWGSVYTTRFAVPHLRY--TKGKIVVLSSAASWLT----------  190 (248)
Q Consensus       123 ~g~id~vv~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~--~~g~iV~isS~~~~~~----------  190 (248)
                        ++|+|||+||.....     .+.++++..+++|+.++.++++++.+...+  .++++|++||...+..          
T Consensus       106 --~~d~Vih~A~~~~~~-----~~~~~~~~~~~~nv~~~~~l~~a~~~~~~~~~~~~~~v~~SS~~vyg~~~~~~~E~~~  178 (381)
T 1n7h_A          106 --KPDEVYNLAAQSHVA-----VSFEIPDYTADVVATGALRLLEAVRSHTIDSGRTVKYYQAGSSEMFGSTPPPQSETTP  178 (381)
T ss_dssp             --CCSEEEECCSCCCHH-----HHHHSHHHHHHHHTHHHHHHHHHHHHHHHHHCCCCEEEEEEEGGGGTTSCSSBCTTSC
T ss_pred             --CCCEEEECCcccCcc-----ccccCHHHHHHHHHHHHHHHHHHHHHhCCccCCccEEEEeCcHHHhCCCCCCCCCCCC
Confidence              799999999975432     134667889999999999999999987543  2469999999876542          


Q ss_pred             CCCCccchHHHHHHHHHHHHHHHHhCCC----eEEEEEecCcc
Q 044010          191 APRMSFYNASKAALVLFFETLRVELGSD----VGVTIVTPGFI  229 (248)
Q Consensus       191 ~~~~~~Y~~sKaal~~l~~~la~~~~~~----i~v~~v~pg~v  229 (248)
                      ..+...|+.+|.+.+.+++.++.+++-.    ..++.+.||..
T Consensus       179 ~~~~~~Y~~sK~~~E~~~~~~~~~~~~~~~~~r~~~~~gp~~~  221 (381)
T 1n7h_A          179 FHPRSPYAASKCAAHWYTVNYREAYGLFACNGILFNHESPRRG  221 (381)
T ss_dssp             CCCCSHHHHHHHHHHHHHHHHHHHHCCEEEEEEECCEECTTSC
T ss_pred             CCCCCchHHHHHHHHHHHHHHHHHhCCcEEEEEeCceeCCCCC
Confidence            2345689999999999999999988632    22345566644

>2rh8_A Anthocyanidin reductase; flavonoids, rossmann fold, short chain dehydrogenase/reductase, oxidoreductase; 2.22A {Vitis vinifera} PDB: 3hfs_A

Probab=99.84  E-value=5.4e-21  Score=165.45  Aligned_cols=170  Identities=16%  Similarity=0.125  Sum_probs=124.9

Q ss_pred             CCEEEEcCCCChHHHHHHHHHHHcCCeEEEEeCCcchHHHH--HHHHHhhCCCcEEEEEccCCCHHHHHHHHHHHHhHcC
Q 044010           47 GKVVIITGASSGIGEHLAYEYARRGACLALCARREKSLEEV--ADTAREIGSPDVITIRADVSKVDDCRSLVEETMNHFG  124 (248)
Q Consensus        47 ~k~~lVtGg~~gIG~aia~~l~~~G~~V~l~~r~~~~~~~~--~~~l~~~~~~~v~~~~~D~~~~~~~~~~~~~~~~~~g  124 (248)
                      +|++|||||+|+||.+++++|+++|++|+++.|+.++.++.  .+.+..  ..++.++.+|++|.+++.++++       
T Consensus         9 ~~~vlVTGatGfIG~~l~~~Ll~~G~~V~~~~r~~~~~~~~~~~~~~~~--~~~~~~~~~Dl~d~~~~~~~~~-------   79 (338)
T 2rh8_A            9 KKTACVVGGTGFVASLLVKLLLQKGYAVNTTVRDPDNQKKVSHLLELQE--LGDLKIFRADLTDELSFEAPIA-------   79 (338)
T ss_dssp             CCEEEEECTTSHHHHHHHHHHHHTTCEEEEEESCTTCTTTTHHHHHHGG--GSCEEEEECCTTTSSSSHHHHT-------
T ss_pred             CCEEEEECCchHHHHHHHHHHHHCCCEEEEEEcCcchhhhHHHHHhcCC--CCcEEEEecCCCChHHHHHHHc-------
Confidence            68999999999999999999999999999988976543211  122321  2368889999999988887764       


Q ss_pred             CccEEEEccccCCcccccccCChHHHHHHHHhhhHHHHHHHHHHhhhhhhcCCeEEEEcCccccccC-------------
Q 044010          125 RLDHLVNNAGISSVALFEDIVNITDFKQIMNINFWGSVYTTRFAVPHLRYTKGKIVVLSSAASWLTA-------------  191 (248)
Q Consensus       125 ~id~vv~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~g~iV~isS~~~~~~~-------------  191 (248)
                      ++|+|||+||.....      ..+..++.+++|+.++.++++++.+..  ..+++|++||.+++.+.             
T Consensus        80 ~~D~Vih~A~~~~~~------~~~~~~~~~~~nv~gt~~ll~aa~~~~--~v~r~V~~SS~~~~~~~~~~~~~~~~~E~~  151 (338)
T 2rh8_A           80 GCDFVFHVATPVHFA------SEDPENDMIKPAIQGVVNVMKACTRAK--SVKRVILTSSAAAVTINQLDGTGLVVDEKN  151 (338)
T ss_dssp             TCSEEEEESSCCCC---------------CHHHHHHHHHHHHHHHHCT--TCCEEEEECCHHHHHHHHHTCSCCCCCTTT
T ss_pred             CCCEEEEeCCccCCC------CCCcHHHHHHHHHHHHHHHHHHHHHcC--CcCEEEEEecHHHeecCCcCCCCcccChhh
Confidence            589999999854211      112234588999999999999987542  24699999997743210             


Q ss_pred             --------C---CCccchHHHHHHHHHHHHHHHHhCCCeEEEEEecCccccCccc
Q 044010          192 --------P---RMSFYNASKAALVLFFETLRVELGSDVGVTIVTPGFIESELTQ  235 (248)
Q Consensus       192 --------~---~~~~Y~~sKaal~~l~~~la~~~~~~i~v~~v~pg~v~T~~~~  235 (248)
                              +   ....|+.||.+.+.+++.++.++  +++++++.||.+.+|...
T Consensus       152 ~~~~~~~~~~~~~~~~Y~~sK~~~E~~~~~~~~~~--gi~~~~lrp~~v~Gp~~~  204 (338)
T 2rh8_A          152 WTDIEFLTSAKPPTWGYPASKTLAEKAAWKFAEEN--NIDLITVIPTLMAGSSLT  204 (338)
T ss_dssp             TTCC-------CCCCCCTTSCCHHHHHHHHHHHHH--TCCEEEEEECEEESCCSS
T ss_pred             ccchhhccccCCccchHHHHHHHHHHHHHHHHHHc--CCcEEEEeCCceECCCCC
Confidence                    0   01159999999999998887765  489999999999998654

>3ko8_A NAD-dependent epimerase/dehydratase; isomerase, UDP-galactose 4-epimerase; HET: NAD; 1.80A {Pyrobaculum calidifontis} SCOP: c.2.1.0 PDB: 3icp_A* 3aw9_A*

Probab=99.84  E-value=9.1e-21  Score=162.16  Aligned_cols=162  Identities=18%  Similarity=0.148  Sum_probs=129.3

Q ss_pred             CEEEEcCCCChHHHHHHHHHHHcCCeEEEEeCCcchHHHHHHHHHhhCCCcEEEEEccCCCHHHHHHHHHHHHhHcCCcc
Q 044010           48 KVVIITGASSGIGEHLAYEYARRGACLALCARREKSLEEVADTAREIGSPDVITIRADVSKVDDCRSLVEETMNHFGRLD  127 (248)
Q Consensus        48 k~~lVtGg~~gIG~aia~~l~~~G~~V~l~~r~~~~~~~~~~~l~~~~~~~v~~~~~D~~~~~~~~~~~~~~~~~~g~id  127 (248)
                      +++|||||+|+||.+++++|+++|++|++++|+.+......       ...+.++.+|++|.+ +.++++       . |
T Consensus         1 m~vlVtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~-------~~~~~~~~~Dl~d~~-~~~~~~-------~-d   64 (312)
T 3ko8_A            1 MRIVVTGGAGFIGSHLVDKLVELGYEVVVVDNLSSGRREFV-------NPSAELHVRDLKDYS-WGAGIK-------G-D   64 (312)
T ss_dssp             CEEEEETTTSHHHHHHHHHHHHTTCEEEEECCCSSCCGGGS-------CTTSEEECCCTTSTT-TTTTCC-------C-S
T ss_pred             CEEEEECCCChHHHHHHHHHHhCCCEEEEEeCCCCCchhhc-------CCCceEEECccccHH-HHhhcC-------C-C
Confidence            47999999999999999999999999999999775432211       236788999999987 554432       3 9


Q ss_pred             EEEEccccCCcccccccCChHHHHHHHHhhhHHHHHHHHHHhhhhhhcCCeEEEEcCcccccc-----------CCCCcc
Q 044010          128 HLVNNAGISSVALFEDIVNITDFKQIMNINFWGSVYTTRFAVPHLRYTKGKIVVLSSAASWLT-----------APRMSF  196 (248)
Q Consensus       128 ~vv~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~g~iV~isS~~~~~~-----------~~~~~~  196 (248)
                      ++||+||.....     .+.++++..+++|+.++.++++++...   ..+++|++||...+..           ..+...
T Consensus        65 ~vih~A~~~~~~-----~~~~~~~~~~~~n~~~~~~l~~a~~~~---~~~~iv~~SS~~vyg~~~~~~~~e~~~~~p~~~  136 (312)
T 3ko8_A           65 VVFHFAANPEVR-----LSTTEPIVHFNENVVATFNVLEWARQT---GVRTVVFASSSTVYGDADVIPTPEEEPYKPISV  136 (312)
T ss_dssp             EEEECCSSCSSS-----GGGSCHHHHHHHHHHHHHHHHHHHHHH---TCCEEEEEEEGGGGCSCSSSSBCTTSCCCCCSH
T ss_pred             EEEECCCCCCch-----hhhhCHHHHHHHHHHHHHHHHHHHHHc---CCCEEEEeCcHHHhCCCCCCCCCCCCCCCCCCh
Confidence            999999964322     234567888999999999999987532   3469999999876532           224578


Q ss_pred             chHHHHHHHHHHHHHHHHhCCCeEEEEEecCccccCccc
Q 044010          197 YNASKAALVLFFETLRVELGSDVGVTIVTPGFIESELTQ  235 (248)
Q Consensus       197 Y~~sKaal~~l~~~la~~~~~~i~v~~v~pg~v~T~~~~  235 (248)
                      |+.+|.+.+.+++.++.++  +++++.+.||.+.++...
T Consensus       137 Y~~sK~~~e~~~~~~~~~~--g~~~~~lrp~~v~g~~~~  173 (312)
T 3ko8_A          137 YGAAKAAGEVMCATYARLF--GVRCLAVRYANVVGPRLR  173 (312)
T ss_dssp             HHHHHHHHHHHHHHHHHHH--CCEEEEEEECEEECTTCC
T ss_pred             HHHHHHHHHHHHHHHHHHh--CCCEEEEeeccccCcCCC
Confidence            9999999999999999998  589999999999988654

>3dqp_A Oxidoreductase YLBE; alpha-beta protein., structural genomics, PSI-2, protein structure initiative; 1.40A {Lactococcus lactis subsp}

Probab=99.84  E-value=1.4e-20  Score=153.38  Aligned_cols=152  Identities=18%  Similarity=0.301  Sum_probs=124.2

Q ss_pred             EEEEcCCCChHHHHHHHHHHHcCCeEEEEeCCcchHHHHHHHHHhhCCCcEEEEEccCCC-HHHHHHHHHHHHhHcCCcc
Q 044010           49 VVIITGASSGIGEHLAYEYARRGACLALCARREKSLEEVADTAREIGSPDVITIRADVSK-VDDCRSLVEETMNHFGRLD  127 (248)
Q Consensus        49 ~~lVtGg~~gIG~aia~~l~~~G~~V~l~~r~~~~~~~~~~~l~~~~~~~v~~~~~D~~~-~~~~~~~~~~~~~~~g~id  127 (248)
                      +++||||+|+||++++++|+++|++|++++|+.++.+..         .++.++.+|++| .+++.++++       ++|
T Consensus         2 ~ilItGatG~iG~~l~~~L~~~g~~V~~~~R~~~~~~~~---------~~~~~~~~D~~d~~~~~~~~~~-------~~d   65 (219)
T 3dqp_A            2 KIFIVGSTGRVGKSLLKSLSTTDYQIYAGARKVEQVPQY---------NNVKAVHFDVDWTPEEMAKQLH-------GMD   65 (219)
T ss_dssp             EEEEESTTSHHHHHHHHHHTTSSCEEEEEESSGGGSCCC---------TTEEEEECCTTSCHHHHHTTTT-------TCS
T ss_pred             eEEEECCCCHHHHHHHHHHHHCCCEEEEEECCccchhhc---------CCceEEEecccCCHHHHHHHHc-------CCC
Confidence            699999999999999999999999999999987653321         378999999999 888877664       699


Q ss_pred             EEEEccccCCcccccccCChHHHHHHHHhhhHHHHHHHHHHhhhhhhcCCeEEEEcCccccccCCC-------CccchHH
Q 044010          128 HLVNNAGISSVALFEDIVNITDFKQIMNINFWGSVYTTRFAVPHLRYTKGKIVVLSSAASWLTAPR-------MSFYNAS  200 (248)
Q Consensus       128 ~vv~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~g~iV~isS~~~~~~~~~-------~~~Y~~s  200 (248)
                      ++||+||....             +.+++|+.++..+++++..   ...+++|++||..+..+.+.       ...|+.+
T Consensus        66 ~vi~~ag~~~~-------------~~~~~n~~~~~~l~~a~~~---~~~~~iv~~SS~~~~~~~~~~e~~~~~~~~Y~~s  129 (219)
T 3dqp_A           66 AIINVSGSGGK-------------SLLKVDLYGAVKLMQAAEK---AEVKRFILLSTIFSLQPEKWIGAGFDALKDYYIA  129 (219)
T ss_dssp             EEEECCCCTTS-------------SCCCCCCHHHHHHHHHHHH---TTCCEEEEECCTTTTCGGGCCSHHHHHTHHHHHH
T ss_pred             EEEECCcCCCC-------------CcEeEeHHHHHHHHHHHHH---hCCCEEEEECcccccCCCcccccccccccHHHHH
Confidence            99999997642             1567899999998888742   23369999999888776555       6789999


Q ss_pred             HHHHHHHHHHHHHHhCCCeEEEEEecCccccCccccc
Q 044010          201 KAALVLFFETLRVELGSDVGVTIVTPGFIESELTQGK  237 (248)
Q Consensus       201 Kaal~~l~~~la~~~~~~i~v~~v~pg~v~T~~~~~~  237 (248)
                      |.+.+.+.+   .  ..+++++.+.||.+.++.....
T Consensus       130 K~~~e~~~~---~--~~~i~~~ilrp~~v~g~~~~~~  161 (219)
T 3dqp_A          130 KHFADLYLT---K--ETNLDYTIIQPGALTEEEATGL  161 (219)
T ss_dssp             HHHHHHHHH---H--SCCCEEEEEEECSEECSCCCSE
T ss_pred             HHHHHHHHH---h--ccCCcEEEEeCceEecCCCCCc
Confidence            999999887   2  3359999999999998765443

>2c5a_A GDP-mannose-3', 5'-epimerase; short chain dehydratase/reductase, GDP-gulose, GDP-galactose, keto intermediate, vitamin C, SDR; HET: GDC NAD BTB; 1.4A {Arabidopsis thaliana} SCOP: c.2.1.2 PDB: 2c59_A* 2c54_A* 2c5e_A*

Probab=99.84  E-value=4.5e-20  Score=162.59  Aligned_cols=168  Identities=17%  Similarity=0.080  Sum_probs=133.7

Q ss_pred             CCCCCEEEEcCCCChHHHHHHHHHHHcCCeEEEEeCCcchHHHHHHHHHhhCCCcEEEEEccCCCHHHHHHHHHHHHhHc
Q 044010           44 DVSGKVVIITGASSGIGEHLAYEYARRGACLALCARREKSLEEVADTAREIGSPDVITIRADVSKVDDCRSLVEETMNHF  123 (248)
Q Consensus        44 ~~~~k~~lVtGg~~gIG~aia~~l~~~G~~V~l~~r~~~~~~~~~~~l~~~~~~~v~~~~~D~~~~~~~~~~~~~~~~~~  123 (248)
                      +.+++++|||||+|+||.+++++|+++|++|++++|+..+....      . ..++.++.+|++|.+++.++++      
T Consensus        26 ~~~~~~vlVtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~------~-~~~v~~~~~Dl~d~~~~~~~~~------   92 (379)
T 2c5a_A           26 PSENLKISITGAGGFIASHIARRLKHEGHYVIASDWKKNEHMTE------D-MFCDEFHLVDLRVMENCLKVTE------   92 (379)
T ss_dssp             TTSCCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESSCCSSSCG------G-GTCSEEEECCTTSHHHHHHHHT------
T ss_pred             cccCCeEEEECCccHHHHHHHHHHHHCCCeEEEEECCCccchhh------c-cCCceEEECCCCCHHHHHHHhC------
Confidence            44678999999999999999999999999999999986543211      0 1257889999999998888774      


Q ss_pred             CCccEEEEccccCCcccccccCChHHHHHHHHhhhHHHHHHHHHHhhhhhhcCCeEEEEcCcccccc-------------
Q 044010          124 GRLDHLVNNAGISSVALFEDIVNITDFKQIMNINFWGSVYTTRFAVPHLRYTKGKIVVLSSAASWLT-------------  190 (248)
Q Consensus       124 g~id~vv~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~g~iV~isS~~~~~~-------------  190 (248)
                       ++|+|||+||.......    ..+++++.+++|+.++.++++++...   ..+++|++||...+..             
T Consensus        93 -~~d~Vih~A~~~~~~~~----~~~~~~~~~~~Nv~g~~~ll~a~~~~---~~~~~V~~SS~~v~~~~~~~~~~~~~~~E  164 (379)
T 2c5a_A           93 -GVDHVFNLAADMGGMGF----IQSNHSVIMYNNTMISFNMIEAARIN---GIKRFFYASSACIYPEFKQLETTNVSLKE  164 (379)
T ss_dssp             -TCSEEEECCCCCCCHHH----HTTCHHHHHHHHHHHHHHHHHHHHHT---TCSEEEEEEEGGGSCGGGSSSSSSCEECG
T ss_pred             -CCCEEEECceecCcccc----cccCHHHHHHHHHHHHHHHHHHHHHc---CCCEEEEEeehheeCCCCCCCccCCCcCc
Confidence             79999999997543211    12457788999999999999988532   3369999999765432             


Q ss_pred             -----CCCCccchHHHHHHHHHHHHHHHHhCCCeEEEEEecCccccCcc
Q 044010          191 -----APRMSFYNASKAALVLFFETLRVELGSDVGVTIVTPGFIESELT  234 (248)
Q Consensus       191 -----~~~~~~Y~~sKaal~~l~~~la~~~~~~i~v~~v~pg~v~T~~~  234 (248)
                           ..+...|+.+|.+.+.+++.++.++  +++++.+.||.+.++..
T Consensus       165 ~~~~~~~~~~~Y~~sK~~~E~~~~~~~~~~--gi~~~ilrp~~v~G~~~  211 (379)
T 2c5a_A          165 SDAWPAEPQDAFGLEKLATEELCKHYNKDF--GIECRIGRFHNIYGPFG  211 (379)
T ss_dssp             GGGSSBCCSSHHHHHHHHHHHHHHHHHHHH--CCEEEEEEECCEECTTS
T ss_pred             ccCCCCCCCChhHHHHHHHHHHHHHHHHHH--CCCEEEEEeCceeCcCC
Confidence                 2335689999999999999999887  48999999999988754

>4egb_A DTDP-glucose 4,6-dehydratase; rhamnose pathway, center for structural genomics of infectio diseases, csgid, niaid; HET: NAD SUC; 3.00A {Bacillus anthracis}

Probab=99.84  E-value=3.3e-20  Score=160.97  Aligned_cols=175  Identities=15%  Similarity=0.114  Sum_probs=129.4

Q ss_pred             cCCCCCEEEEcCCCChHHHHHHHHHHHcC--CeEEEEeCCcchHHHHHHHHHhhC-CCcEEEEEccCCCHHHHHHHHHHH
Q 044010           43 EDVSGKVVIITGASSGIGEHLAYEYARRG--ACLALCARREKSLEEVADTAREIG-SPDVITIRADVSKVDDCRSLVEET  119 (248)
Q Consensus        43 ~~~~~k~~lVtGg~~gIG~aia~~l~~~G--~~V~l~~r~~~~~~~~~~~l~~~~-~~~v~~~~~D~~~~~~~~~~~~~~  119 (248)
                      +.++++++|||||+|+||.+++++|+++|  ++|+..+|......  .+.+.... ..++.++.+|++|.+++.++++..
T Consensus        20 ~~~~~~~vlVtGatG~iG~~l~~~L~~~g~~~~v~~~~~~~~~~~--~~~l~~~~~~~~~~~~~~Dl~d~~~~~~~~~~~   97 (346)
T 4egb_A           20 FQSNAMNILVTGGAGFIGSNFVHYMLQSYETYKIINFDALTYSGN--LNNVKSIQDHPNYYFVKGEIQNGELLEHVIKER   97 (346)
T ss_dssp             ----CEEEEEETTTSHHHHHHHHHHHHHCTTEEEEEEECCCTTCC--GGGGTTTTTCTTEEEEECCTTCHHHHHHHHHHH
T ss_pred             cccCCCeEEEECCccHHHHHHHHHHHhhCCCcEEEEEeccccccc--hhhhhhhccCCCeEEEEcCCCCHHHHHHHHhhc
Confidence            45778999999999999999999999999  67888777542111  11122111 237899999999999999998863


Q ss_pred             HhHcCCccEEEEccccCCcccccccCChHHHHHHHHhhhHHHHHHHHHHhhhhhhcCCeEEEEcCccccccCC-------
Q 044010          120 MNHFGRLDHLVNNAGISSVALFEDIVNITDFKQIMNINFWGSVYTTRFAVPHLRYTKGKIVVLSSAASWLTAP-------  192 (248)
Q Consensus       120 ~~~~g~id~vv~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~g~iV~isS~~~~~~~~-------  192 (248)
                           ++|+|||+||......     +.++++..+++|+.++.++++++...   ..+++|++||...+...+       
T Consensus        98 -----~~d~Vih~A~~~~~~~-----~~~~~~~~~~~nv~~~~~ll~a~~~~---~~~~~v~~SS~~vy~~~~~~~~~~E  164 (346)
T 4egb_A           98 -----DVQVIVNFAAESHVDR-----SIENPIPFYDTNVIGTVTLLELVKKY---PHIKLVQVSTDEVYGSLGKTGRFTE  164 (346)
T ss_dssp             -----TCCEEEECCCCC--------------CHHHHHHTHHHHHHHHHHHHS---TTSEEEEEEEGGGGCCCCSSCCBCT
T ss_pred             -----CCCEEEECCcccchhh-----hhhCHHHHHHHHHHHHHHHHHHHHhc---CCCEEEEeCchHHhCCCCcCCCcCC
Confidence                 6999999999765431     34667789999999999999987643   336899999986654331       


Q ss_pred             -----CCccchHHHHHHHHHHHHHHHHhCCCeEEEEEecCccccCcc
Q 044010          193 -----RMSFYNASKAALVLFFETLRVELGSDVGVTIVTPGFIESELT  234 (248)
Q Consensus       193 -----~~~~Y~~sKaal~~l~~~la~~~~~~i~v~~v~pg~v~T~~~  234 (248)
                           +...|+.+|.+.+.+++.++.++  +++++.+.||.+..+..
T Consensus       165 ~~~~~p~~~Y~~sK~~~E~~~~~~~~~~--g~~~~ilRp~~v~G~~~  209 (346)
T 4egb_A          165 ETPLAPNSPYSSSKASADMIALAYYKTY--QLPVIVTRCSNNYGPYQ  209 (346)
T ss_dssp             TSCCCCCSHHHHHHHHHHHHHHHHHHHH--CCCEEEEEECEEESTTC
T ss_pred             CCCCCCCChhHHHHHHHHHHHHHHHHHh--CCCEEEEeecceeCcCC
Confidence                 23679999999999999999887  47899999999887654

>1rpn_A GDP-mannose 4,6-dehydratase; short-chain dehydrogenase/reductase, rossmann fold, lyase; HET: NDP GDP; 2.15A {Pseudomonas aeruginosa} SCOP: c.2.1.2

Probab=99.84  E-value=7.1e-20  Score=158.11  Aligned_cols=172  Identities=14%  Similarity=-0.002  Sum_probs=128.9

Q ss_pred             CCCCCEEEEcCCCChHHHHHHHHHHHcCCeEEEEeCCcchHH-HHHHHHHhhCCCcEEEEEccCCCHHHHHHHHHHHHhH
Q 044010           44 DVSGKVVIITGASSGIGEHLAYEYARRGACLALCARREKSLE-EVADTAREIGSPDVITIRADVSKVDDCRSLVEETMNH  122 (248)
Q Consensus        44 ~~~~k~~lVtGg~~gIG~aia~~l~~~G~~V~l~~r~~~~~~-~~~~~l~~~~~~~v~~~~~D~~~~~~~~~~~~~~~~~  122 (248)
                      .-.++++|||||+|+||.+++++|+++|++|++++|+.++.. ...+.+.  ...++.++.+|++|.+++.++++..   
T Consensus        11 ~~~~~~vlVTGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~--~~~~~~~~~~Dl~d~~~~~~~~~~~---   85 (335)
T 1rpn_A           11 GSMTRSALVTGITGQDGAYLAKLLLEKGYRVHGLVARRSSDTRWRLRELG--IEGDIQYEDGDMADACSVQRAVIKA---   85 (335)
T ss_dssp             ----CEEEEETTTSHHHHHHHHHHHHTTCEEEEEECCCSSCCCHHHHHTT--CGGGEEEEECCTTCHHHHHHHHHHH---
T ss_pred             cccCCeEEEECCCChHHHHHHHHHHHCCCeEEEEeCCCccccccchhhcc--ccCceEEEECCCCCHHHHHHHHHHc---
Confidence            456889999999999999999999999999999999865421 1111111  1236889999999999999988765   


Q ss_pred             cCCccEEEEccccCCcccccccCChHHHHHHHHhhhHHHHHHHHHHhhhhhhc-CCeEEEEcCccccccCC---------
Q 044010          123 FGRLDHLVNNAGISSVALFEDIVNITDFKQIMNINFWGSVYTTRFAVPHLRYT-KGKIVVLSSAASWLTAP---------  192 (248)
Q Consensus       123 ~g~id~vv~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~-~g~iV~isS~~~~~~~~---------  192 (248)
                        ++|+|||+||......     +.++++..+++|+.++.++++++.+.   . .+++|++||...+.+.+         
T Consensus        86 --~~d~Vih~A~~~~~~~-----~~~~~~~~~~~n~~~~~~l~~a~~~~---~~~~~~v~~SS~~v~g~~~~~~~~E~~~  155 (335)
T 1rpn_A           86 --QPQEVYNLAAQSFVGA-----SWNQPVTTGVVDGLGVTHLLEAIRQF---SPETRFYQASTSEMFGLIQAERQDENTP  155 (335)
T ss_dssp             --CCSEEEECCSCCCHHH-----HTTSHHHHHHHHTHHHHHHHHHHHHH---CTTSEEEEEEEGGGGCSCSSSSBCTTSC
T ss_pred             --CCCEEEECccccchhh-----hhhChHHHHHHHHHHHHHHHHHHHHh---CCCCeEEEEeCHHHhCCCCCCCCCcccC
Confidence              6999999999754321     12456788999999999999998643   3 36999999977654322         


Q ss_pred             --CCccchHHHHHHHHHHHHHHHHhCCCeEEEEEecCccccC
Q 044010          193 --RMSFYNASKAALVLFFETLRVELGSDVGVTIVTPGFIESE  232 (248)
Q Consensus       193 --~~~~Y~~sKaal~~l~~~la~~~~~~i~v~~v~pg~v~T~  232 (248)
                        +...|+.+|.+.+.+++.++.+++  +++..+.|+.+..+
T Consensus       156 ~~p~~~Y~~sK~~~e~~~~~~~~~~~--~~~~i~r~~~v~Gp  195 (335)
T 1rpn_A          156 FYPRSPYGVAKLYGHWITVNYRESFG--LHASSGILFNHESP  195 (335)
T ss_dssp             CCCCSHHHHHHHHHHHHHHHHHHHHC--CCEEEEEECCEECT
T ss_pred             CCCCChhHHHHHHHHHHHHHHHHHcC--CcEEEEeeCcccCC
Confidence              245799999999999999998875  55555666665443

>2c20_A UDP-glucose 4-epimerase; carbohydrate metabolism, galactose metabolism, isomerase, NAD, spine; HET: NAD; 2.7A {Bacillus anthracis}

Probab=99.83  E-value=1.4e-19  Score=155.90  Aligned_cols=164  Identities=15%  Similarity=0.173  Sum_probs=130.9

Q ss_pred             CEEEEcCCCChHHHHHHHHHHHcCCeEEEEeCCcchHHHHHHHHHhhCCCcEEEEEccCCCHHHHHHHHHHHHhHcCCcc
Q 044010           48 KVVIITGASSGIGEHLAYEYARRGACLALCARREKSLEEVADTAREIGSPDVITIRADVSKVDDCRSLVEETMNHFGRLD  127 (248)
Q Consensus        48 k~~lVtGg~~gIG~aia~~l~~~G~~V~l~~r~~~~~~~~~~~l~~~~~~~v~~~~~D~~~~~~~~~~~~~~~~~~g~id  127 (248)
                      +++|||||+|+||.+++++|+++|++|++++|+.....   +.+   . .++.++.+|++|.+++++++++     +++|
T Consensus         2 ~~ilVtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~---~~~---~-~~~~~~~~D~~~~~~~~~~~~~-----~~~d   69 (330)
T 2c20_A            2 NSILICGGAGYIGSHAVKKLVDEGLSVVVVDNLQTGHE---DAI---T-EGAKFYNGDLRDKAFLRDVFTQ-----ENIE   69 (330)
T ss_dssp             CEEEEETTTSHHHHHHHHHHHHTTCEEEEEECCSSCCG---GGS---C-TTSEEEECCTTCHHHHHHHHHH-----SCEE
T ss_pred             CEEEEECCCcHHHHHHHHHHHhCCCEEEEEeCCCcCch---hhc---C-CCcEEEECCCCCHHHHHHHHhh-----cCCC
Confidence            57999999999999999999999999999999764322   111   1 2578899999999999888765     3799


Q ss_pred             EEEEccccCCcccccccCChHHHHHHHHhhhHHHHHHHHHHhhhhhhcCCeEEEEcCccccccC-----------CCCcc
Q 044010          128 HLVNNAGISSVALFEDIVNITDFKQIMNINFWGSVYTTRFAVPHLRYTKGKIVVLSSAASWLTA-----------PRMSF  196 (248)
Q Consensus       128 ~vv~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~g~iV~isS~~~~~~~-----------~~~~~  196 (248)
                      +|||+||......     +.+++++.+++|+.++.++++++...   ..+++|++||...+...           .+...
T Consensus        70 ~vih~a~~~~~~~-----~~~~~~~~~~~n~~~~~~l~~a~~~~---~~~~~v~~Ss~~~~~~~~~~~~~E~~~~~~~~~  141 (330)
T 2c20_A           70 AVMHFAADSLVGV-----SMEKPLQYYNNNVYGALCLLEVMDEF---KVDKFIFSSTAATYGEVDVDLITEETMTNPTNT  141 (330)
T ss_dssp             EEEECCCCCCHHH-----HHHSHHHHHHHHHHHHHHHHHHHHHT---TCCEEEEECCGGGGCSCSSSSBCTTSCCCCSSH
T ss_pred             EEEECCcccCccc-----cccCHHHHHHHHhHHHHHHHHHHHHc---CCCEEEEeCCceeeCCCCCCCCCcCCCCCCCCh
Confidence            9999999764321     23567889999999999999986432   33699999997765421           23568


Q ss_pred             chHHHHHHHHHHHHHHHHhCCCeEEEEEecCccccCc
Q 044010          197 YNASKAALVLFFETLRVELGSDVGVTIVTPGFIESEL  233 (248)
Q Consensus       197 Y~~sKaal~~l~~~la~~~~~~i~v~~v~pg~v~T~~  233 (248)
                      |+.+|.+.+.+++.++.++  +++++.+.||.+..+.
T Consensus       142 Y~~sK~~~e~~~~~~~~~~--~~~~~ilrp~~v~G~~  176 (330)
T 2c20_A          142 YGETKLAIEKMLHWYSQAS--NLRYKIFRYFNVAGAT  176 (330)
T ss_dssp             HHHHHHHHHHHHHHHHHTS--SCEEEEEECSEEECCC
T ss_pred             HHHHHHHHHHHHHHHHHHh--CCcEEEEecCcccCCC
Confidence            9999999999999999876  5899999999887664

>4f6c_A AUSA reductase domain protein; thioester reductase, oxidoreductase; 2.81A {Staphylococcus aureus}

Probab=99.83  E-value=6.3e-20  Score=164.08  Aligned_cols=170  Identities=16%  Similarity=0.124  Sum_probs=129.9

Q ss_pred             CCCCCEEEEcCCCChHHHHHHHHHHHcCCeEEEEeCCcc---hHHHHHHHHHhh--------CCCcEEEEEccCCCHHHH
Q 044010           44 DVSGKVVIITGASSGIGEHLAYEYARRGACLALCARREK---SLEEVADTAREI--------GSPDVITIRADVSKVDDC  112 (248)
Q Consensus        44 ~~~~k~~lVtGg~~gIG~aia~~l~~~G~~V~l~~r~~~---~~~~~~~~l~~~--------~~~~v~~~~~D~~~~~~~  112 (248)
                      ..++|++|||||+|+||.+++++|+++|++|++++|+.+   ..+...+.++..        ...++.++.+|++|.+++
T Consensus        66 ~~~~~~vlVTGatG~iG~~l~~~L~~~g~~V~~~~R~~~~~~~~~~l~~~l~~~~~~~~~~~~~~~v~~v~~Dl~d~~~l  145 (427)
T 4f6c_A           66 HRPLGNTLLTGATGFLGAYLIEALQGYSHRIYCFIRADNEEIAWYKLMTNLNDYFSEETVEMMLSNIEVIVGDFECMDDV  145 (427)
T ss_dssp             CCCCEEEEEECTTSHHHHHHHHHHTTTEEEEEEEEECSSHHHHHHHHHHHHHHHSCHHHHHHHHTTEEEEEECC---CCC
T ss_pred             CCCCCEEEEecCCcHHHHHHHHHHHcCCCEEEEEECCCChHHHHHHHHHHHHHhccccccccccCceEEEeCCCCCcccC
Confidence            456889999999999999999999999999999999887   333443433332        124799999999998888


Q ss_pred             HHHHHHHHhHcCCccEEEEccccCCcccccccCChHHHHHHHHhhhHHHHHHHHHHhhhhhhcCCeEEEEcCcccccc--
Q 044010          113 RSLVEETMNHFGRLDHLVNNAGISSVALFEDIVNITDFKQIMNINFWGSVYTTRFAVPHLRYTKGKIVVLSSAASWLT--  190 (248)
Q Consensus       113 ~~~~~~~~~~~g~id~vv~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~g~iV~isS~~~~~~--  190 (248)
                      .        ..+++|+|||+||....        .+++++.+++|+.++.++++.+.+    ..+++|++||..+ ..  
T Consensus       146 ~--------~~~~~d~Vih~A~~~~~--------~~~~~~~~~~Nv~g~~~l~~aa~~----~~~~~v~~SS~~~-G~~~  204 (427)
T 4f6c_A          146 V--------LPENMDTIIHAGARTDH--------FGDDDEFEKVNVQGTVDVIRLAQQ----HHARLIYVSTISV-GTYF  204 (427)
T ss_dssp             C--------CSSCCSEEEECCCCC---------------CHHHHHHHHHHHHHHHHHH----TTCEEEEEEEGGG-GSEE
T ss_pred             C--------CcCCCCEEEECCcccCC--------CCCHHHHHHHHHHHHHHHHHHHHh----cCCcEEEECchHh-CCCc
Confidence            7        45689999999997631        256778899999999999999875    3469999999876 11  


Q ss_pred             -----------------CCCCccchHHHHHHHHHHHHHHHHhCCCeEEEEEecCccccCccccc
Q 044010          191 -----------------APRMSFYNASKAALVLFFETLRVELGSDVGVTIVTPGFIESELTQGK  237 (248)
Q Consensus       191 -----------------~~~~~~Y~~sKaal~~l~~~la~~~~~~i~v~~v~pg~v~T~~~~~~  237 (248)
                                       ......|+.+|.+.+.+++.++.   .+++++.+.||.|.++.....
T Consensus       205 ~~~~~~~~~~E~~~~~~~~~~~~Y~~sK~~~E~~~~~~~~---~g~~~~ivRpg~v~G~~~~~~  265 (427)
T 4f6c_A          205 DIDTEDVTFSEADVYKGQLLTSPYTRSKFYSELKVLEAVN---NGLDGRIVRVGNLTSPYNGRW  265 (427)
T ss_dssp             CSSCSCCEECTTCSCSSCCCCSHHHHHHHHHHHHHHHHHH---TTCCEEEEEECCEESCSSSCC
T ss_pred             cCCCCCccccccccccCCCCCCchHHHHHHHHHHHHHHHH---cCCCEEEEeCCeeecCCCCCc
Confidence                             22567899999999999999764   359999999999988765543

>3dhn_A NAD-dependent epimerase/dehydratase; reductase, PF01370, Q89Z24_bactn, NESG, BTR310, structural genomics, PSI-2; 2.00A {Bacteroides thetaiotaomicron}

Probab=99.83  E-value=2.9e-20  Score=152.10  Aligned_cols=156  Identities=17%  Similarity=0.177  Sum_probs=124.8

Q ss_pred             CEEEEcCCCChHHHHHHHHHHHcCCeEEEEeCCcchHHHHHHHHHhhCCCcEEEEEccCCCHHHHHHHHHHHHhHcCCcc
Q 044010           48 KVVIITGASSGIGEHLAYEYARRGACLALCARREKSLEEVADTAREIGSPDVITIRADVSKVDDCRSLVEETMNHFGRLD  127 (248)
Q Consensus        48 k~~lVtGg~~gIG~aia~~l~~~G~~V~l~~r~~~~~~~~~~~l~~~~~~~v~~~~~D~~~~~~~~~~~~~~~~~~g~id  127 (248)
                      ++++||||+|+||.+++++|+++|++|++++|+.++.+..        ..++.++.+|++|.+++.++++       ++|
T Consensus         5 ~~ilItGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~--------~~~~~~~~~Dl~d~~~~~~~~~-------~~d   69 (227)
T 3dhn_A            5 KKIVLIGASGFVGSALLNEALNRGFEVTAVVRHPEKIKIE--------NEHLKVKKADVSSLDEVCEVCK-------GAD   69 (227)
T ss_dssp             CEEEEETCCHHHHHHHHHHHHTTTCEEEEECSCGGGCCCC--------CTTEEEECCCTTCHHHHHHHHT-------TCS
T ss_pred             CEEEEEcCCchHHHHHHHHHHHCCCEEEEEEcCcccchhc--------cCceEEEEecCCCHHHHHHHhc-------CCC
Confidence            6899999999999999999999999999999987653321        1378999999999999888875       699


Q ss_pred             EEEEccccCCcccccccCChHHHHHHHHhhhHHHHHHHHHHhhhhhhcCCeEEEEcCccccccCC----------CCccc
Q 044010          128 HLVNNAGISSVALFEDIVNITDFKQIMNINFWGSVYTTRFAVPHLRYTKGKIVVLSSAASWLTAP----------RMSFY  197 (248)
Q Consensus       128 ~vv~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~g~iV~isS~~~~~~~~----------~~~~Y  197 (248)
                      ++||+||....       +    .+.+++|+.++.++++.+.+.   ..+++|++||..++.+.+          +...|
T Consensus        70 ~vi~~a~~~~~-------~----~~~~~~n~~~~~~l~~~~~~~---~~~~~v~~Ss~~~~~~~~~~~~~~~~~~p~~~Y  135 (227)
T 3dhn_A           70 AVISAFNPGWN-------N----PDIYDETIKVYLTIIDGVKKA---GVNRFLMVGGAGSLFIAPGLRLMDSGEVPENIL  135 (227)
T ss_dssp             EEEECCCC-----------------CCSHHHHHHHHHHHHHHHT---TCSEEEEECCSTTSEEETTEEGGGTTCSCGGGH
T ss_pred             EEEEeCcCCCC-------C----hhHHHHHHHHHHHHHHHHHHh---CCCEEEEeCChhhccCCCCCccccCCcchHHHH
Confidence            99999986421       1    126778999998888887532   236999999988765443          35689


Q ss_pred             hHHHHHHHHHHHHHHHHhCCCeEEEEEecCccccCcc
Q 044010          198 NASKAALVLFFETLRVELGSDVGVTIVTPGFIESELT  234 (248)
Q Consensus       198 ~~sKaal~~l~~~la~~~~~~i~v~~v~pg~v~T~~~  234 (248)
                      +.+|.+.+.+.+.++.+.  +++++.+.||.+.++..
T Consensus       136 ~~sK~~~e~~~~~~~~~~--~~~~~ilrp~~v~g~~~  170 (227)
T 3dhn_A          136 PGVKALGEFYLNFLMKEK--EIDWVFFSPAADMRPGV  170 (227)
T ss_dssp             HHHHHHHHHHHHTGGGCC--SSEEEEEECCSEEESCC
T ss_pred             HHHHHHHHHHHHHHhhcc--CccEEEEeCCcccCCCc
Confidence            999999999998888754  59999999999987654

>3ehe_A UDP-glucose 4-epimerase (GALE-1); PSI-II, NYSGXRC, ST genomics, protein structure initiative, NEW YORK SGX resear for structural genomics; HET: NAD; 1.87A {Archaeoglobus fulgidus} SCOP: c.2.1.0

Probab=99.83  E-value=6e-20  Score=157.32  Aligned_cols=161  Identities=17%  Similarity=0.193  Sum_probs=125.4

Q ss_pred             CEEEEcCCCChHHHHHHHHHHHcCCeEEEEeCCcchHHHHHHHHHhhCCCcEEEEEccCCCHHHHHHHHHHHHhHcCCcc
Q 044010           48 KVVIITGASSGIGEHLAYEYARRGACLALCARREKSLEEVADTAREIGSPDVITIRADVSKVDDCRSLVEETMNHFGRLD  127 (248)
Q Consensus        48 k~~lVtGg~~gIG~aia~~l~~~G~~V~l~~r~~~~~~~~~~~l~~~~~~~v~~~~~D~~~~~~~~~~~~~~~~~~g~id  127 (248)
                      |++|||||+|+||.+++++|+++|..|++..|+....+..        ...+.++.+|+++ +++.++++       ++|
T Consensus         2 ~~vlVTGatG~iG~~l~~~L~~~g~~v~~~~~~~~~~~~~--------~~~~~~~~~Dl~~-~~~~~~~~-------~~d   65 (313)
T 3ehe_A            2 SLIVVTGGAGFIGSHVVDKLSESNEIVVIDNLSSGNEEFV--------NEAARLVKADLAA-DDIKDYLK-------GAE   65 (313)
T ss_dssp             -CEEEETTTSHHHHHHHHHHTTTSCEEEECCCSSCCGGGS--------CTTEEEECCCTTT-SCCHHHHT-------TCS
T ss_pred             CEEEEECCCchHHHHHHHHHHhCCCEEEEEcCCCCChhhc--------CCCcEEEECcCCh-HHHHHHhc-------CCC
Confidence            4799999999999999999999995555554444332211        2368899999999 88877765       799


Q ss_pred             EEEEccccCCcccccccCChHHHHHHHHhhhHHHHHHHHHHhhhhhhcCCeEEEEcCccccc-----------cCCCCcc
Q 044010          128 HLVNNAGISSVALFEDIVNITDFKQIMNINFWGSVYTTRFAVPHLRYTKGKIVVLSSAASWL-----------TAPRMSF  196 (248)
Q Consensus       128 ~vv~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~g~iV~isS~~~~~-----------~~~~~~~  196 (248)
                      ++||+|+.....     .+.+++++.+++|+.++.++++++..   ...+++|++||...+.           +..+...
T Consensus        66 ~vih~a~~~~~~-----~~~~~~~~~~~~nv~~~~~l~~~~~~---~~~~~iv~~SS~~vyg~~~~~~~~E~~~~~~~~~  137 (313)
T 3ehe_A           66 EVWHIAANPDVR-----IGAENPDEIYRNNVLATYRLLEAMRK---AGVSRIVFTSTSTVYGEAKVIPTPEDYPTHPISL  137 (313)
T ss_dssp             EEEECCCCCCCC------CCCCHHHHHHHHHHHHHHHHHHHHH---HTCCEEEEECCGGGGCSCSSSSBCTTSCCCCCSH
T ss_pred             EEEECCCCCChh-----hhhhCHHHHHHHHHHHHHHHHHHHHH---cCCCeEEEeCchHHhCcCCCCCCCCCCCCCCCCH
Confidence            999999964322     23467889999999999999998643   2347999999987653           2334567


Q ss_pred             chHHHHHHHHHHHHHHHHhCCCeEEEEEecCccccCcc
Q 044010          197 YNASKAALVLFFETLRVELGSDVGVTIVTPGFIESELT  234 (248)
Q Consensus       197 Y~~sKaal~~l~~~la~~~~~~i~v~~v~pg~v~T~~~  234 (248)
                      |+.+|.+.+.+++.++.++  +++++.+.|+.+.++..
T Consensus       138 Y~~sK~~~e~~~~~~~~~~--g~~~~ilRp~~v~G~~~  173 (313)
T 3ehe_A          138 YGASKLACEALIESYCHTF--DMQAWIYRFANVIGRRS  173 (313)
T ss_dssp             HHHHHHHHHHHHHHHHHHT--TCEEEEEECSCEESTTC
T ss_pred             HHHHHHHHHHHHHHHHHhc--CCCEEEEeeccccCcCC
Confidence            9999999999999999987  58999999999987743

>2q1w_A Putative nucleotide sugar epimerase/ dehydratase; rossman fold, protein-NAD complex, sugar binding protein; HET: NAD; 2.19A {Bordetella bronchiseptica}

Probab=99.83  E-value=9.7e-20  Score=157.61  Aligned_cols=150  Identities=19%  Similarity=0.156  Sum_probs=114.4

Q ss_pred             ccCCCCCEEEEcCCCChHHHHHHHHHHHcCCeEEEEeCCcchHHHHHHHHHhhCCCcEEEEEccCCCHHHHHHHHHHHHh
Q 044010           42 SEDVSGKVVIITGASSGIGEHLAYEYARRGACLALCARREKSLEEVADTAREIGSPDVITIRADVSKVDDCRSLVEETMN  121 (248)
Q Consensus        42 ~~~~~~k~~lVtGg~~gIG~aia~~l~~~G~~V~l~~r~~~~~~~~~~~l~~~~~~~v~~~~~D~~~~~~~~~~~~~~~~  121 (248)
                      ...++++++|||||+|+||.+++++|+++|++|++++|+.....+.   +.+.  .++.++.+|++|.++++++++.   
T Consensus        16 ~~~~~~~~vlVTGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~---l~~~--~~~~~~~~Dl~d~~~~~~~~~~---   87 (333)
T 2q1w_A           16 PRGSHMKKVFITGICGQIGSHIAELLLERGDKVVGIDNFATGRREH---LKDH--PNLTFVEGSIADHALVNQLIGD---   87 (333)
T ss_dssp             -----CCEEEEETTTSHHHHHHHHHHHHTTCEEEEEECCSSCCGGG---SCCC--TTEEEEECCTTCHHHHHHHHHH---
T ss_pred             eecCCCCEEEEeCCccHHHHHHHHHHHHCCCEEEEEECCCccchhh---Hhhc--CCceEEEEeCCCHHHHHHHHhc---
Confidence            3467889999999999999999999999999999999976432111   1111  3688999999999999888875   


Q ss_pred             HcCCccEEEEccccCCcccccccCChHHHHHHHHhhhHHHHHHHHHHhhhhhhcCCeEEEEcCccccc----cC------
Q 044010          122 HFGRLDHLVNNAGISSVALFEDIVNITDFKQIMNINFWGSVYTTRFAVPHLRYTKGKIVVLSSAASWL----TA------  191 (248)
Q Consensus       122 ~~g~id~vv~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~g~iV~isS~~~~~----~~------  191 (248)
                        +++|+|||+||.....      +.++++  +++|+.++.++++++.+.   ..+++|++||.+.+.    ..      
T Consensus        88 --~~~D~vih~A~~~~~~------~~~~~~--~~~N~~~~~~l~~a~~~~---~~~~iV~~SS~~~~g~~~~~~~~~~~E  154 (333)
T 2q1w_A           88 --LQPDAVVHTAASYKDP------DDWYND--TLTNCVGGSNVVQAAKKN---NVGRFVYFQTALCYGVKPIQQPVRLDH  154 (333)
T ss_dssp             --HCCSEEEECCCCCSCT------TCHHHH--HHHHTHHHHHHHHHHHHT---TCSEEEEEEEGGGGCSCCCSSSBCTTS
T ss_pred             --cCCcEEEECceecCCC------ccCChH--HHHHHHHHHHHHHHHHHh---CCCEEEEECcHHHhCCCcccCCCCcCC
Confidence              2799999999976532      124444  899999999999998752   347999999977654    21      


Q ss_pred             --CCC-ccchHHHHHHHHHHHH-HH
Q 044010          192 --PRM-SFYNASKAALVLFFET-LR  212 (248)
Q Consensus       192 --~~~-~~Y~~sKaal~~l~~~-la  212 (248)
                        .+. ..|+.+|.+.+.+++. ++
T Consensus       155 ~~~p~~~~Y~~sK~~~E~~~~~s~~  179 (333)
T 2q1w_A          155 PRNPANSSYAISKSANEDYLEYSGL  179 (333)
T ss_dssp             CCCCTTCHHHHHHHHHHHHHHHHTC
T ss_pred             CCCCCCCchHHHHHHHHHHHHhhhC
Confidence              223 7899999999999988 65

>1z45_A GAL10 bifunctional protein; epimerase, mutarotase, metabolism, isomerase; HET: GAL NAD GUD; 1.85A {Saccharomyces cerevisiae} SCOP: b.30.5.4 c.2.1.2

Probab=99.82  E-value=1.8e-19  Score=170.66  Aligned_cols=179  Identities=17%  Similarity=0.161  Sum_probs=131.9

Q ss_pred             cccCCCCCEEEEcCCCChHHHHHHHHHHHcCCeEEEEeCCcchHHHHHHHHHhhCCCcEEEEEccCCCHHHHHHHHHHHH
Q 044010           41 FSEDVSGKVVIITGASSGIGEHLAYEYARRGACLALCARREKSLEEVADTAREIGSPDVITIRADVSKVDDCRSLVEETM  120 (248)
Q Consensus        41 ~~~~~~~k~~lVtGg~~gIG~aia~~l~~~G~~V~l~~r~~~~~~~~~~~l~~~~~~~v~~~~~D~~~~~~~~~~~~~~~  120 (248)
                      +.+++++|++|||||+|+||.+++++|+++|++|++++|+.....+..+.++.....++.++.+|++|.+++++++++. 
T Consensus         5 ~~~~~~~~~ilVTGatG~IG~~l~~~L~~~G~~V~~~~r~~~~~~~~~~~l~~~~~~~v~~v~~Dl~d~~~l~~~~~~~-   83 (699)
T 1z45_A            5 LQSESTSKIVLVTGGAGYIGSHTVVELIENGYDCVVADNLSNSTYDSVARLEVLTKHHIPFYEVDLCDRKGLEKVFKEY-   83 (699)
T ss_dssp             ------CCEEEEETTTSHHHHHHHHHHHHTTCEEEEEECCSSCCTHHHHHHHHHHTSCCCEEECCTTCHHHHHHHHHHS-
T ss_pred             cccccCCCEEEEECCCCHHHHHHHHHHHHCcCEEEEEECCCcchHHHHHHHhhccCCceEEEEcCCCCHHHHHHHHHhC-
Confidence            3457889999999999999999999999999999999997654333333333322236788999999999998888653 


Q ss_pred             hHcCCccEEEEccccCCcccccccCChHHHHHHHHhhhHHHHHHHHHHhhhhhhcCCeEEEEcCcccccc----------
Q 044010          121 NHFGRLDHLVNNAGISSVALFEDIVNITDFKQIMNINFWGSVYTTRFAVPHLRYTKGKIVVLSSAASWLT----------  190 (248)
Q Consensus       121 ~~~g~id~vv~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~g~iV~isS~~~~~~----------  190 (248)
                          ++|+|||+||.......     .++..+.+++|+.++.++++++..   ...+++|++||.+.+..          
T Consensus        84 ----~~D~Vih~A~~~~~~~~-----~~~~~~~~~~Nv~gt~~ll~a~~~---~~~~~iV~~SS~~vyg~~~~~~~~~~~  151 (699)
T 1z45_A           84 ----KIDSVIHFAGLKAVGES-----TQIPLRYYHNNILGTVVLLELMQQ---YNVSKFVFSSSATVYGDATRFPNMIPI  151 (699)
T ss_dssp             ----CCCEEEECCSCCCHHHH-----HHSHHHHHHHHHHHHHHHHHHHHH---HTCCEEEEEEEGGGGCCGGGSTTCCSB
T ss_pred             ----CCCEEEECCcccCcCcc-----ccCHHHHHHHHHHHHHHHHHHHHH---cCCCEEEEECcHHHhCCCccccccCCc
Confidence                79999999997643321     233456789999999999887643   23479999999775421          


Q ss_pred             -----CCCCccchHHHHHHHHHHHHHHHHhCCCeEEEEEecCccccC
Q 044010          191 -----APRMSFYNASKAALVLFFETLRVELGSDVGVTIVTPGFIESE  232 (248)
Q Consensus       191 -----~~~~~~Y~~sKaal~~l~~~la~~~~~~i~v~~v~pg~v~T~  232 (248)
                           ..+...|+.||++.+.+++.++.+...++++..+.|+.+..+
T Consensus       152 ~E~~~~~p~~~Y~~sK~~~E~~~~~~~~~~~~g~~~~ilR~~~vyG~  198 (699)
T 1z45_A          152 PEECPLGPTNPYGHTKYAIENILNDLYNSDKKSWKFAILRYFNPIGA  198 (699)
T ss_dssp             CTTSCCCCCSHHHHHHHHHHHHHHHHHHHSTTSCEEEEEEECEEECC
T ss_pred             cccCCCCCCChHHHHHHHHHHHHHHHHHhccCCCcEEEEEeccccCC
Confidence                 113468999999999999999888644588888888766543

>1hdo_A Biliverdin IX beta reductase; foetal metabolism, HAEM degradation, flavin reductase, diaphorase, green HAEM binding protein; HET: NAP; 1.15A {Homo sapiens} SCOP: c.2.1.2 PDB: 1he2_A* 1he3_A* 1he4_A* 1he5_A*

Probab=99.82  E-value=2.9e-19  Score=143.51  Aligned_cols=154  Identities=18%  Similarity=0.163  Sum_probs=118.9

Q ss_pred             CCCCEEEEcCCCChHHHHHHHHHHHcCCeEEEEeCCcchHHHHHHHHHhhCCCcEEEEEccCCCHHHHHHHHHHHHhHcC
Q 044010           45 VSGKVVIITGASSGIGEHLAYEYARRGACLALCARREKSLEEVADTAREIGSPDVITIRADVSKVDDCRSLVEETMNHFG  124 (248)
Q Consensus        45 ~~~k~~lVtGg~~gIG~aia~~l~~~G~~V~l~~r~~~~~~~~~~~l~~~~~~~v~~~~~D~~~~~~~~~~~~~~~~~~g  124 (248)
                      |++++++||||+|+||++++++|+++|++|++++|+.++.+.       ....++.++.+|++|.+++.++++       
T Consensus         1 M~~~~ilVtGatG~iG~~l~~~l~~~g~~V~~~~r~~~~~~~-------~~~~~~~~~~~D~~~~~~~~~~~~-------   66 (206)
T 1hdo_A            1 MAVKKIAIFGATGQTGLTTLAQAVQAGYEVTVLVRDSSRLPS-------EGPRPAHVVVGDVLQAADVDKTVA-------   66 (206)
T ss_dssp             CCCCEEEEESTTSHHHHHHHHHHHHTTCEEEEEESCGGGSCS-------SSCCCSEEEESCTTSHHHHHHHHT-------
T ss_pred             CCCCEEEEEcCCcHHHHHHHHHHHHCCCeEEEEEeChhhccc-------ccCCceEEEEecCCCHHHHHHHHc-------
Confidence            345899999999999999999999999999999998765321       112368899999999998887765       


Q ss_pred             CccEEEEccccCCcccccccCChHHHHHHHHhhhHHHHHHHHHHhhhhhhcCCeEEEEcCccccccCC----CCccchHH
Q 044010          125 RLDHLVNNAGISSVALFEDIVNITDFKQIMNINFWGSVYTTRFAVPHLRYTKGKIVVLSSAASWLTAP----RMSFYNAS  200 (248)
Q Consensus       125 ~id~vv~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~g~iV~isS~~~~~~~~----~~~~Y~~s  200 (248)
                      ++|++||++|.....   +  .       .++|+.++..+++.+.+.   ..+++|++||...+...+    ....|+.+
T Consensus        67 ~~d~vi~~a~~~~~~---~--~-------~~~n~~~~~~~~~~~~~~---~~~~~v~~Ss~~~~~~~~~~~~~~~~y~~~  131 (206)
T 1hdo_A           67 GQDAVIVLLGTRNDL---S--P-------TTVMSEGARNIVAAMKAH---GVDKVVACTSAFLLWDPTKVPPRLQAVTDD  131 (206)
T ss_dssp             TCSEEEECCCCTTCC---S--C-------CCHHHHHHHHHHHHHHHH---TCCEEEEECCGGGTSCTTCSCGGGHHHHHH
T ss_pred             CCCEEEECccCCCCC---C--c-------cchHHHHHHHHHHHHHHh---CCCeEEEEeeeeeccCcccccccchhHHHH
Confidence            589999999975431   1  1       136778888887776532   346999999987665544    45789999


Q ss_pred             HHHHHHHHHHHHHHhCCCeEEEEEecCcc-ccCc
Q 044010          201 KAALVLFFETLRVELGSDVGVTIVTPGFI-ESEL  233 (248)
Q Consensus       201 Kaal~~l~~~la~~~~~~i~v~~v~pg~v-~T~~  233 (248)
                      |.+++.+.+.      .+++++.+.||.+ .++.
T Consensus       132 K~~~e~~~~~------~~i~~~~lrp~~~~~~~~  159 (206)
T 1hdo_A          132 HIRMHKVLRE------SGLKYVAVMPPHIGDQPL  159 (206)
T ss_dssp             HHHHHHHHHH------TCSEEEEECCSEEECCCC
T ss_pred             HHHHHHHHHh------CCCCEEEEeCCcccCCCC
Confidence            9999998742      3589999999998 4443

>1r6d_A TDP-glucose-4,6-dehydratase; rossmann fold, short-chain dehydrogenase/reductase, lyase; HET: NAD DAU; 1.35A {Streptomyces venezuelae} SCOP: c.2.1.2 PDB: 1r66_A*

Probab=99.82  E-value=1.2e-19  Score=156.98  Aligned_cols=166  Identities=17%  Similarity=0.151  Sum_probs=129.8

Q ss_pred             EEEEcCCCChHHHHHHHHHHHc---C---CeEEEEeCCcch--HHHHHHHHHhhCCCcEEEEEccCCCHHHHHHHHHHHH
Q 044010           49 VVIITGASSGIGEHLAYEYARR---G---ACLALCARREKS--LEEVADTAREIGSPDVITIRADVSKVDDCRSLVEETM  120 (248)
Q Consensus        49 ~~lVtGg~~gIG~aia~~l~~~---G---~~V~l~~r~~~~--~~~~~~~l~~~~~~~v~~~~~D~~~~~~~~~~~~~~~  120 (248)
                      ++|||||+|+||.+++++|+++   |   ++|++++|+...  .+.. +.+.  ...++.++.+|++|.+++++++    
T Consensus         2 ~vlVTGatG~iG~~l~~~L~~~~~~g~~~~~V~~~~r~~~~~~~~~~-~~~~--~~~~~~~~~~Dl~d~~~~~~~~----   74 (337)
T 1r6d_A            2 RLLVTGGAGFIGSHFVRQLLAGAYPDVPADEVIVLDSLTYAGNRANL-APVD--ADPRLRFVHGDIRDAGLLAREL----   74 (337)
T ss_dssp             EEEEETTTSHHHHHHHHHHHHTSCTTSCCSEEEEEECCCTTCCGGGG-GGGT--TCTTEEEEECCTTCHHHHHHHT----
T ss_pred             eEEEECCccHHHHHHHHHHHhhhcCCCCceEEEEEECCCccCchhhh-hhcc--cCCCeEEEEcCCCCHHHHHHHh----
Confidence            6999999999999999999997   8   999999986421  1111 1111  1237889999999998887776    


Q ss_pred             hHcCCccEEEEccccCCcccccccCChHHHHHHHHhhhHHHHHHHHHHhhhhhhcCCeEEEEcCcccccc----------
Q 044010          121 NHFGRLDHLVNNAGISSVALFEDIVNITDFKQIMNINFWGSVYTTRFAVPHLRYTKGKIVVLSSAASWLT----------  190 (248)
Q Consensus       121 ~~~g~id~vv~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~g~iV~isS~~~~~~----------  190 (248)
                         +++|+|||+||.....     .+.+++++.+++|+.++.++++++.+.   ..+++|++||.+.+..          
T Consensus        75 ---~~~d~Vih~A~~~~~~-----~~~~~~~~~~~~Nv~~~~~l~~a~~~~---~~~~~v~~SS~~vyg~~~~~~~~E~~  143 (337)
T 1r6d_A           75 ---RGVDAIVHFAAESHVD-----RSIAGASVFTETNVQGTQTLLQCAVDA---GVGRVVHVSTNQVYGSIDSGSWTESS  143 (337)
T ss_dssp             ---TTCCEEEECCSCCCHH-----HHHHCCHHHHHHHTHHHHHHHHHHHHT---TCCEEEEEEEGGGGCCCSSSCBCTTS
T ss_pred             ---cCCCEEEECCCccCch-----hhhhCHHHHHHHHHHHHHHHHHHHHHc---CCCEEEEecchHHhCCCCCCCCCCCC
Confidence               4799999999975422     123456788999999999999998764   2369999999765432          


Q ss_pred             -CCCCccchHHHHHHHHHHHHHHHHhCCCeEEEEEecCccccCcc
Q 044010          191 -APRMSFYNASKAALVLFFETLRVELGSDVGVTIVTPGFIESELT  234 (248)
Q Consensus       191 -~~~~~~Y~~sKaal~~l~~~la~~~~~~i~v~~v~pg~v~T~~~  234 (248)
                       ..+...|+.||.+.+.+++.++.++  +++++.+.||.+.++..
T Consensus       144 ~~~~~~~Y~~sK~~~e~~~~~~~~~~--g~~~~ilrp~~v~G~~~  186 (337)
T 1r6d_A          144 PLEPNSPYAASKAGSDLVARAYHRTY--GLDVRITRCCNNYGPYQ  186 (337)
T ss_dssp             CCCCCSHHHHHHHHHHHHHHHHHHHH--CCCEEEEEECEEECTTC
T ss_pred             CCCCCCchHHHHHHHHHHHHHHHHHH--CCCEEEEEeeeeECCCC
Confidence             2345689999999999999999887  48899999999988764

>2q1s_A Putative nucleotide sugar epimerase/ dehydratase; rossman fold, protein-NADH complex, sugar binding protein; HET: NAI; 1.50A {Bordetella bronchiseptica} PDB: 2pzj_A* 2q1t_A* 2q1u_A*

Probab=99.82  E-value=7.4e-20  Score=161.02  Aligned_cols=171  Identities=12%  Similarity=0.017  Sum_probs=132.5

Q ss_pred             cCCCCCEEEEcCCCChHHHHHHHHHHHcC-CeEEEEeCCcchHHHHHHHHHhhCCCcEEEEEccCCCHHHHHHHHHHHHh
Q 044010           43 EDVSGKVVIITGASSGIGEHLAYEYARRG-ACLALCARREKSLEEVADTAREIGSPDVITIRADVSKVDDCRSLVEETMN  121 (248)
Q Consensus        43 ~~~~~k~~lVtGg~~gIG~aia~~l~~~G-~~V~l~~r~~~~~~~~~~~l~~~~~~~v~~~~~D~~~~~~~~~~~~~~~~  121 (248)
                      .+++++++|||||+|+||.+++++|+++| ++|++++|+.....+   .+.  ...++.++.+|++|.++++++++    
T Consensus        28 ~~~~~~~ilVtGatG~iG~~l~~~L~~~g~~~V~~~~r~~~~~~~---~l~--~~~~v~~~~~Dl~d~~~l~~~~~----   98 (377)
T 2q1s_A           28 SKLANTNVMVVGGAGFVGSNLVKRLLELGVNQVHVVDNLLSAEKI---NVP--DHPAVRFSETSITDDALLASLQD----   98 (377)
T ss_dssp             GGGTTCEEEEETTTSHHHHHHHHHHHHTTCSEEEEECCCTTCCGG---GSC--CCTTEEEECSCTTCHHHHHHCCS----
T ss_pred             HHhCCCEEEEECCccHHHHHHHHHHHHcCCceEEEEECCCCCchh---hcc--CCCceEEEECCCCCHHHHHHHhh----
Confidence            35788999999999999999999999999 999999997654211   111  12378899999999988776654    


Q ss_pred             HcCCccEEEEccccCCcccccccCChHHHHHHHHhhhHHHHHHHHHHhhhhhhcCCeEEEEcCccccc------------
Q 044010          122 HFGRLDHLVNNAGISSVALFEDIVNITDFKQIMNINFWGSVYTTRFAVPHLRYTKGKIVVLSSAASWL------------  189 (248)
Q Consensus       122 ~~g~id~vv~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~g~iV~isS~~~~~------------  189 (248)
                         ++|+|||+||.....     .+.+++++.+++|+.++.++++++...  ...+++|++||.+.+.            
T Consensus        99 ---~~d~Vih~A~~~~~~-----~~~~~~~~~~~~nv~~~~~ll~a~~~~--~~~~~~V~~SS~~vyg~~~~~~~~~~E~  168 (377)
T 2q1s_A           99 ---EYDYVFHLATYHGNQ-----SSIHDPLADHENNTLTTLKLYERLKHF--KRLKKVVYSAAGCSIAEKTFDDAKATEE  168 (377)
T ss_dssp             ---CCSEEEECCCCSCHH-----HHHHCHHHHHHHHTHHHHHHHHHHTTC--SSCCEEEEEEEC--------------CC
T ss_pred             ---CCCEEEECCCccCch-----hhhhCHHHHHHHHHHHHHHHHHHHHHh--CCCCeEEEeCCHHHcCCCCCCCcCcccc
Confidence               799999999975432     123567889999999999999987532  0236899999976432            


Q ss_pred             ----cC-CCCccchHHHHHHHHHHHHHHHHhCCCeEEEEEecCccccCcc
Q 044010          190 ----TA-PRMSFYNASKAALVLFFETLRVELGSDVGVTIVTPGFIESELT  234 (248)
Q Consensus       190 ----~~-~~~~~Y~~sKaal~~l~~~la~~~~~~i~v~~v~pg~v~T~~~  234 (248)
                          +. .+...|+.+|.+.+.+++.++.++  +++++.+.||.+.++..
T Consensus       169 ~~~~~~~~~~~~Y~~sK~~~E~~~~~~~~~~--gi~~~ilRp~~v~G~~~  216 (377)
T 2q1s_A          169 TDIVSLHNNDSPYSMSKIFGEFYSVYYHKQH--QLPTVRARFQNVYGPGE  216 (377)
T ss_dssp             CCCCCSSCCCSHHHHHHHHHHHHHHHHHHHH--CCCEEEEEECCEECTTC
T ss_pred             cccccccCCCCchHHHHHHHHHHHHHHHHHh--CCCEEEEeeccEECCCC
Confidence                11 345689999999999999999887  58999999999988765

>2ydy_A Methionine adenosyltransferase 2 subunit beta; oxidoreductase; 2.25A {Homo sapiens} PDB: 2ydx_A

Probab=99.82  E-value=8.5e-20  Score=156.43  Aligned_cols=154  Identities=14%  Similarity=0.136  Sum_probs=97.7

Q ss_pred             CCEEEEcCCCChHHHHHHHHHHHcCCeEEEEeCCcchHHHHHHHHHhhCCCcEEEEEccCCCHHHHHHHHHHHHhHcCCc
Q 044010           47 GKVVIITGASSGIGEHLAYEYARRGACLALCARREKSLEEVADTAREIGSPDVITIRADVSKVDDCRSLVEETMNHFGRL  126 (248)
Q Consensus        47 ~k~~lVtGg~~gIG~aia~~l~~~G~~V~l~~r~~~~~~~~~~~l~~~~~~~v~~~~~D~~~~~~~~~~~~~~~~~~g~i  126 (248)
                      +|++|||||+|+||.+++++|+++|++|++++|+.++            . +  ++.+|++|.+++.++++..     ++
T Consensus         2 ~~~vlVtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~------------~-~--~~~~Dl~d~~~~~~~~~~~-----~~   61 (315)
T 2ydy_A            2 NRRVLVTGATGLLGRAVHKEFQQNNWHAVGCGFRRAR------------P-K--FEQVNLLDSNAVHHIIHDF-----QP   61 (315)
T ss_dssp             CCEEEEETTTSHHHHHHHHHHHTTTCEEEEEC---------------------------------CHHHHHHH-----CC
T ss_pred             CCeEEEECCCcHHHHHHHHHHHhCCCeEEEEccCCCC------------C-C--eEEecCCCHHHHHHHHHhh-----CC
Confidence            5799999999999999999999999999999986542            1 2  6789999999998888764     79


Q ss_pred             cEEEEccccCCcccccccCChHHHHHHHHhhhHHHHHHHHHHhhhhhhcCCeEEEEcCcccccc----------CCCCcc
Q 044010          127 DHLVNNAGISSVALFEDIVNITDFKQIMNINFWGSVYTTRFAVPHLRYTKGKIVVLSSAASWLT----------APRMSF  196 (248)
Q Consensus       127 d~vv~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~g~iV~isS~~~~~~----------~~~~~~  196 (248)
                      |+|||+||.....     .+.+++++.+++|+.++.++++++.+.    ++++|++||...+.+          ..+...
T Consensus        62 d~vih~A~~~~~~-----~~~~~~~~~~~~n~~~~~~l~~a~~~~----~~~~v~~SS~~v~~~~~~~~~E~~~~~~~~~  132 (315)
T 2ydy_A           62 HVIVHCAAERRPD-----VVENQPDAASQLNVDASGNLAKEAAAV----GAFLIYISSDYVFDGTNPPYREEDIPAPLNL  132 (315)
T ss_dssp             SEEEECC------------------------CHHHHHHHHHHHHH----TCEEEEEEEGGGSCSSSCSBCTTSCCCCCSH
T ss_pred             CEEEECCcccChh-----hhhcCHHHHHHHHHHHHHHHHHHHHHc----CCeEEEEchHHHcCCCCCCCCCCCCCCCcCH
Confidence            9999999975432     134678899999999999999998752    359999999887654          234568


Q ss_pred             chHHHHHHHHHHHHHHHHhCCCeEEEEEecCcccc
Q 044010          197 YNASKAALVLFFETLRVELGSDVGVTIVTPGFIES  231 (248)
Q Consensus       197 Y~~sKaal~~l~~~la~~~~~~i~v~~v~pg~v~T  231 (248)
                      |+.+|.+.+.+++.++.++ ..+|++.|. |+..+
T Consensus       133 Y~~sK~~~e~~~~~~~~~~-~~lR~~~v~-G~~~~  165 (315)
T 2ydy_A          133 YGKTKLDGEKAVLENNLGA-AVLRIPILY-GEVEK  165 (315)
T ss_dssp             HHHHHHHHHHHHHHHCTTC-EEEEECSEE-CSCSS
T ss_pred             HHHHHHHHHHHHHHhCCCe-EEEeeeeee-CCCCc
Confidence            9999999999999875443 127777777 66665

>2yy7_A L-threonine dehydrogenase; thermolabIle, flavobacterium FRIG KUC-1, oxidoreductase; HET: PE8 NAD MES; 2.06A {Flavobacterium frigidimaris}

Probab=99.81  E-value=1.9e-19  Score=153.87  Aligned_cols=162  Identities=17%  Similarity=0.082  Sum_probs=129.7

Q ss_pred             CCEEEEcCCCChHHHHHHHHHHHc--CCeEEEEeCCcchHHHHHHHHHhhCCCcEEEEEccCCCHHHHHHHHHHHHhHcC
Q 044010           47 GKVVIITGASSGIGEHLAYEYARR--GACLALCARREKSLEEVADTAREIGSPDVITIRADVSKVDDCRSLVEETMNHFG  124 (248)
Q Consensus        47 ~k~~lVtGg~~gIG~aia~~l~~~--G~~V~l~~r~~~~~~~~~~~l~~~~~~~v~~~~~D~~~~~~~~~~~~~~~~~~g  124 (248)
                      +|++|||||+|+||.+++++|+++  |++|++++|+..+.+     +..    ++.++.+|++|.+++++++++.     
T Consensus         2 ~~~vlVtGatG~iG~~l~~~L~~~~~g~~V~~~~r~~~~~~-----~~~----~~~~~~~D~~d~~~~~~~~~~~-----   67 (312)
T 2yy7_A            2 NPKILIIGACGQIGTELTQKLRKLYGTENVIASDIRKLNTD-----VVN----SGPFEVVNALDFNQIEHLVEVH-----   67 (312)
T ss_dssp             CCCEEEETTTSHHHHHHHHHHHHHHCGGGEEEEESCCCSCH-----HHH----SSCEEECCTTCHHHHHHHHHHT-----
T ss_pred             CceEEEECCccHHHHHHHHHHHHhCCCCEEEEEcCCCcccc-----ccC----CCceEEecCCCHHHHHHHHhhc-----
Confidence            478999999999999999999999  899999999876522     111    4567899999999998888753     


Q ss_pred             CccEEEEccccCCcccccccCChHHHHHHHHhhhHHHHHHHHHHhhhhhhcCCeEEEEcCccccccC------------C
Q 044010          125 RLDHLVNNAGISSVALFEDIVNITDFKQIMNINFWGSVYTTRFAVPHLRYTKGKIVVLSSAASWLTA------------P  192 (248)
Q Consensus       125 ~id~vv~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~g~iV~isS~~~~~~~------------~  192 (248)
                      ++|++||+||.....      ..+++++.+++|+.++.++++++.+.   ..+++|++||...+.+.            .
T Consensus        68 ~~d~vih~a~~~~~~------~~~~~~~~~~~n~~~~~~l~~~~~~~---~~~~~v~~SS~~~~~~~~~~~~~~e~~~~~  138 (312)
T 2yy7_A           68 KITDIYLMAALLSAT------AEKNPAFAWDLNMNSLFHVLNLAKAK---KIKKIFWPSSIAVFGPTTPKENTPQYTIME  138 (312)
T ss_dssp             TCCEEEECCCCCHHH------HHHCHHHHHHHHHHHHHHHHHHHHTT---SCSEEECCEEGGGCCTTSCSSSBCSSCBCC
T ss_pred             CCCEEEECCccCCCc------hhhChHHHHHHHHHHHHHHHHHHHHc---CCCEEEEeccHHHhCCCCCCCCccccCcCC
Confidence            699999999975421      12556788999999999999987642   33699999998765432            1


Q ss_pred             CCccchHHHHHHHHHHHHHHHHhCCCeEEEEEecCccccCc
Q 044010          193 RMSFYNASKAALVLFFETLRVELGSDVGVTIVTPGFIESEL  233 (248)
Q Consensus       193 ~~~~Y~~sKaal~~l~~~la~~~~~~i~v~~v~pg~v~T~~  233 (248)
                      +...|+.+|.+.+.+++.++.++  +++++.+.||.+..+.
T Consensus       139 ~~~~Y~~sK~~~e~~~~~~~~~~--~~~~~~lrp~~v~g~~  177 (312)
T 2yy7_A          139 PSTVYGISKQAGERWCEYYHNIY--GVDVRSIRYPGLISWS  177 (312)
T ss_dssp             CCSHHHHHHHHHHHHHHHHHHHH--CCEEECEEECEEECSS
T ss_pred             CCchhHHHHHHHHHHHHHHHHhc--CCcEEEEeCCeEecCC
Confidence            25679999999999999998887  4899999999887743

>3slg_A PBGP3 protein; structural genomics, seattle structural genomics center for infectious disease, ssgcid, melioidosis, glanders; 2.10A {Burkholderia pseudomallei}

Probab=99.81  E-value=2.2e-19  Score=157.32  Aligned_cols=167  Identities=16%  Similarity=0.142  Sum_probs=132.2

Q ss_pred             CCCCCEEEEcCCCChHHHHHHHHHHHc-CCeEEEEeCCcchHHHHHHHHHhhCCCcEEEEEccCC-CHHHHHHHHHHHHh
Q 044010           44 DVSGKVVIITGASSGIGEHLAYEYARR-GACLALCARREKSLEEVADTAREIGSPDVITIRADVS-KVDDCRSLVEETMN  121 (248)
Q Consensus        44 ~~~~k~~lVtGg~~gIG~aia~~l~~~-G~~V~l~~r~~~~~~~~~~~l~~~~~~~v~~~~~D~~-~~~~~~~~~~~~~~  121 (248)
                      .|+++++|||||+|+||.+++++|+++ |++|++++|+.++.+...+      ..++.++.+|++ |.+++.++++    
T Consensus        21 ~m~~~~vlVtGatG~iG~~l~~~L~~~~g~~V~~~~r~~~~~~~~~~------~~~v~~~~~Dl~~d~~~~~~~~~----   90 (372)
T 3slg_A           21 SMKAKKVLILGVNGFIGHHLSKRILETTDWEVFGMDMQTDRLGDLVK------HERMHFFEGDITINKEWVEYHVK----   90 (372)
T ss_dssp             --CCCEEEEESCSSHHHHHHHHHHHHHSSCEEEEEESCCTTTGGGGG------STTEEEEECCTTTCHHHHHHHHH----
T ss_pred             ccCCCEEEEECCCChHHHHHHHHHHhCCCCEEEEEeCChhhhhhhcc------CCCeEEEeCccCCCHHHHHHHhc----
Confidence            577899999999999999999999998 9999999998765433211      137899999999 9999988876    


Q ss_pred             HcCCccEEEEccccCCcccccccCChHHHHHHHHhhhHHHHHHHHHHhhhhhhcCCeEEEEcCccccccC----------
Q 044010          122 HFGRLDHLVNNAGISSVALFEDIVNITDFKQIMNINFWGSVYTTRFAVPHLRYTKGKIVVLSSAASWLTA----------  191 (248)
Q Consensus       122 ~~g~id~vv~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~g~iV~isS~~~~~~~----------  191 (248)
                         ++|+|||+||...+..     ..++..+.+++|+.++.++++++...   . .++|++||...+...          
T Consensus        91 ---~~d~Vih~A~~~~~~~-----~~~~~~~~~~~nv~~~~~ll~a~~~~---~-~~~v~~SS~~vyg~~~~~~~~e~~~  158 (372)
T 3slg_A           91 ---KCDVILPLVAIATPAT-----YVKQPLRVFELDFEANLPIVRSAVKY---G-KHLVFPSTSEVYGMCADEQFDPDAS  158 (372)
T ss_dssp             ---HCSEEEECBCCCCHHH-----HHHCHHHHHHHHTTTTHHHHHHHHHH---T-CEEEEECCGGGGBSCCCSSBCTTTC
T ss_pred             ---cCCEEEEcCccccHHH-----HhhCHHHHHHHHHHHHHHHHHHHHHh---C-CcEEEeCcHHHhCCCCCCCCCcccc
Confidence               5999999999765432     23456678899999999999887543   2 699999997654321          


Q ss_pred             --------CCCccchHHHHHHHHHHHHHHHHhCCCeEEEEEecCccccCccc
Q 044010          192 --------PRMSFYNASKAALVLFFETLRVELGSDVGVTIVTPGFIESELTQ  235 (248)
Q Consensus       192 --------~~~~~Y~~sKaal~~l~~~la~~~~~~i~v~~v~pg~v~T~~~~  235 (248)
                              .+...|+.+|.+.+.+++.++.+   ++++..+.|+.+..+-..
T Consensus       159 ~~~~~p~~~p~~~Y~~sK~~~E~~~~~~~~~---g~~~~ilRp~~v~G~~~~  207 (372)
T 3slg_A          159 ALTYGPINKPRWIYACSKQLMDRVIWGYGME---GLNFTLFRPFNWIGPGLD  207 (372)
T ss_dssp             CEEECCTTCTTHHHHHHHHHHHHHHHHHHTT---TCEEEEEEECSEECSSCC
T ss_pred             ccccCCCCCCCCcHHHHHHHHHHHHHHHHHC---CCCEEEEccccccCCCcc
Confidence                    12236999999999999999887   589999999999776543

>2bll_A Protein YFBG; decarboxylase, short chain dehydrogenase, L-ARA4N biosynthes methyltransferase, transferase; 2.3A {Escherichia coli} SCOP: c.2.1.2 PDB: 1u9j_A 1z73_A 1z75_A 1z7b_A 1z74_A

Probab=99.81  E-value=4e-19  Score=153.78  Aligned_cols=163  Identities=15%  Similarity=0.138  Sum_probs=127.2

Q ss_pred             CEEEEcCCCChHHHHHHHHHHHc-CCeEEEEeCCcchHHHHHHHHHhhCCCcEEEEEccCCCH-HHHHHHHHHHHhHcCC
Q 044010           48 KVVIITGASSGIGEHLAYEYARR-GACLALCARREKSLEEVADTAREIGSPDVITIRADVSKV-DDCRSLVEETMNHFGR  125 (248)
Q Consensus        48 k~~lVtGg~~gIG~aia~~l~~~-G~~V~l~~r~~~~~~~~~~~l~~~~~~~v~~~~~D~~~~-~~~~~~~~~~~~~~g~  125 (248)
                      +++|||||+|+||.+++++|+++ |++|++++|+.++.+...      ...++.++.+|++|. +.++++++       +
T Consensus         1 m~vlVtGatG~iG~~l~~~L~~~~g~~V~~~~r~~~~~~~~~------~~~~~~~~~~D~~~~~~~~~~~~~-------~   67 (345)
T 2bll_A            1 MRVLILGVNGFIGNHLTERLLREDHYEVYGLDIGSDAISRFL------NHPHFHFVEGDISIHSEWIEYHVK-------K   67 (345)
T ss_dssp             CEEEEETCSSHHHHHHHHHHHHSTTCEEEEEESCCGGGGGGT------TCTTEEEEECCTTTCSHHHHHHHH-------H
T ss_pred             CeEEEECCCcHHHHHHHHHHHHhCCCEEEEEeCCcchHHHhh------cCCCeEEEeccccCcHHHHHhhcc-------C
Confidence            47999999999999999999998 899999999876543211      123688999999984 55666654       4


Q ss_pred             ccEEEEccccCCcccccccCChHHHHHHHHhhhHHHHHHHHHHhhhhhhcCCeEEEEcCccccccCCC------------
Q 044010          126 LDHLVNNAGISSVALFEDIVNITDFKQIMNINFWGSVYTTRFAVPHLRYTKGKIVVLSSAASWLTAPR------------  193 (248)
Q Consensus       126 id~vv~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~g~iV~isS~~~~~~~~~------------  193 (248)
                      +|+|||+||...+..     ..+++++.+++|+.++.++++.+.+.    ++++|++||...+...+.            
T Consensus        68 ~d~vih~A~~~~~~~-----~~~~~~~~~~~n~~~~~~l~~~~~~~----~~~~v~~SS~~v~g~~~~~~~~e~~~~~~~  138 (345)
T 2bll_A           68 CDVVLPLVAIATPIE-----YTRNPLRVFELDFEENLRIIRYCVKY----RKRIIFPSTSEVYGMCSDKYFDEDHSNLIV  138 (345)
T ss_dssp             CSEEEECBCCCCHHH-----HHHSHHHHHHHHTHHHHHHHHHHHHT----TCEEEEECCGGGGBTCCCSSBCTTTCCCBC
T ss_pred             CCEEEEcccccCccc-----hhcCHHHHHHHHHHHHHHHHHHHHHh----CCeEEEEecHHHcCCCCCCCcCCccccccc
Confidence            899999999765321     12456778999999999999887542    379999999776532211            


Q ss_pred             ------CccchHHHHHHHHHHHHHHHHhCCCeEEEEEecCccccCcc
Q 044010          194 ------MSFYNASKAALVLFFETLRVELGSDVGVTIVTPGFIESELT  234 (248)
Q Consensus       194 ------~~~Y~~sKaal~~l~~~la~~~~~~i~v~~v~pg~v~T~~~  234 (248)
                            ...|+.+|.+.+.+++.++.++  +++++.+.||.+.++..
T Consensus       139 ~~~~~~~~~Y~~sK~~~e~~~~~~~~~~--~~~~~ilrp~~v~G~~~  183 (345)
T 2bll_A          139 GPVNKPRWIYSVSKQLLDRVIWAYGEKE--GLQFTLFRPFNWMGPRL  183 (345)
T ss_dssp             CCTTCGGGHHHHHHHHHHHHHHHHHHHH--CCCEEEEEECSEECSSC
T ss_pred             CcccCcccccHHHHHHHHHHHHHHHHhc--CCCEEEEcCCcccCCCc
Confidence                  1279999999999999999887  48999999999987654

>2x6t_A ADP-L-glycero-D-manno-heptose-6-epimerase; isomerase, carbohydrate metabolism, stress response; HET: NAP ADP BMA; 2.36A {Escherichia coli} PDB: 2x86_A*

Probab=99.81  E-value=1.4e-19  Score=157.91  Aligned_cols=168  Identities=16%  Similarity=0.188  Sum_probs=127.8

Q ss_pred             CCCCCEEEEcCCCChHHHHHHHHHHHcC-CeEEEEeCCcchHHHHHHHHHhhCCCcEEEEEccCCCHHHHHHHHHHHHhH
Q 044010           44 DVSGKVVIITGASSGIGEHLAYEYARRG-ACLALCARREKSLEEVADTAREIGSPDVITIRADVSKVDDCRSLVEETMNH  122 (248)
Q Consensus        44 ~~~~k~~lVtGg~~gIG~aia~~l~~~G-~~V~l~~r~~~~~~~~~~~l~~~~~~~v~~~~~D~~~~~~~~~~~~~~~~~  122 (248)
                      +++++++|||||+|+||.+++++|+++| ++|++++|+....+     .....  .+. +.+|++|.++++++++.  ..
T Consensus        43 ~~~~~~vlVtGatG~iG~~l~~~L~~~g~~~V~~~~r~~~~~~-----~~~~~--~~~-~~~d~~~~~~~~~~~~~--~~  112 (357)
T 2x6t_A           43 GIEGRMIIVTGGAGFIGSNIVKALNDKGITDILVVDNLKDGTK-----FVNLV--DLN-IADYMDKEDFLIQIMAG--EE  112 (357)
T ss_dssp             -----CEEEETTTSHHHHHHHHHHHHTTCCCEEEEECCSSGGG-----GGGTT--TSC-CSEEEEHHHHHHHHHTT--CC
T ss_pred             cCCCCEEEEECCCcHHHHHHHHHHHHCCCcEEEEEecCCCcch-----hhccc--Cce-EeeecCcHHHHHHHHhh--cc
Confidence            4678999999999999999999999999 89999999765421     11111  222 67899999888877753  23


Q ss_pred             cCCccEEEEccccCCcccccccCChHHHHHHHHhhhHHHHHHHHHHhhhhhhcCCeEEEEcCccccccCC----------
Q 044010          123 FGRLDHLVNNAGISSVALFEDIVNITDFKQIMNINFWGSVYTTRFAVPHLRYTKGKIVVLSSAASWLTAP----------  192 (248)
Q Consensus       123 ~g~id~vv~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~g~iV~isS~~~~~~~~----------  192 (248)
                      ++++|+|||+||....       +.+++++.+++|+.++.++++++.+.   .. ++|++||.+.+...+          
T Consensus       113 ~~~~d~Vih~A~~~~~-------~~~~~~~~~~~n~~~~~~ll~a~~~~---~~-r~V~~SS~~v~g~~~~~~~~E~~~~  181 (357)
T 2x6t_A          113 FGDVEAIFHEGACSST-------TEWDGKYMMDNNYQYSKELLHYCLER---EI-PFLYASSAATYGGRTSDFIESREYE  181 (357)
T ss_dssp             CSSCCEEEECCSCCCT-------TCCCHHHHHHHTHHHHHHHHHHHHHH---TC-CEEEEEEGGGGCSCSSCCCSSGGGC
T ss_pred             cCCCCEEEECCcccCC-------ccCCHHHHHHHHHHHHHHHHHHHHHc---CC-eEEEEcchHHhCCCCCCCcCCcCCC
Confidence            5689999999997643       12456788999999999999998752   34 899999987654332          


Q ss_pred             -CCccchHHHHHHHHHHHHHHHHhCCCeEEEEEecCccccCcc
Q 044010          193 -RMSFYNASKAALVLFFETLRVELGSDVGVTIVTPGFIESELT  234 (248)
Q Consensus       193 -~~~~Y~~sKaal~~l~~~la~~~~~~i~v~~v~pg~v~T~~~  234 (248)
                       +...|+.+|.+.+.+++.++.++  +++++.+.||.+.++..
T Consensus       182 ~p~~~Y~~sK~~~E~~~~~~~~~~--g~~~~ilRp~~v~Gp~~  222 (357)
T 2x6t_A          182 KPLNVFGYSKFLFDEYVRQILPEA--NSQIVGFRYFNVYGPRE  222 (357)
T ss_dssp             CCSSHHHHHHHHHHHHHHHHGGGC--SSCEEEEEECEEESSSC
T ss_pred             CCCChhHHHHHHHHHHHHHHHHHc--CCCEEEEecCeEECCCC
Confidence             25689999999999999998875  58999999999987753

>2a35_A Hypothetical protein PA4017; alpha-beta-alpha sandwich, structura genomics, PSI, protein structure initiative; 1.50A {Pseudomonas aeruginosa} SCOP: c.2.1.2

Probab=99.80  E-value=6e-20  Score=148.77  Aligned_cols=152  Identities=16%  Similarity=0.136  Sum_probs=122.8

Q ss_pred             CCCEEEEcCCCChHHHHHHHHHHHcCC--eEEEEeCCcchHHHHHHHHHhhCCCcEEEEEccCCCHHHHHHHHHHHHhHc
Q 044010           46 SGKVVIITGASSGIGEHLAYEYARRGA--CLALCARREKSLEEVADTAREIGSPDVITIRADVSKVDDCRSLVEETMNHF  123 (248)
Q Consensus        46 ~~k~~lVtGg~~gIG~aia~~l~~~G~--~V~l~~r~~~~~~~~~~~l~~~~~~~v~~~~~D~~~~~~~~~~~~~~~~~~  123 (248)
                      .+++++||||+|+||.+++++|+++|+  +|++++|+.++           ...++.++.+|++|.+++++++       
T Consensus         4 ~~~~vlVtGatG~iG~~l~~~l~~~g~~~~V~~~~r~~~~-----------~~~~~~~~~~D~~~~~~~~~~~-------   65 (215)
T 2a35_A            4 TPKRVLLAGATGLTGEHLLDRILSEPTLAKVIAPARKALA-----------EHPRLDNPVGPLAELLPQLDGS-------   65 (215)
T ss_dssp             CCCEEEEECTTSHHHHHHHHHHHHCTTCCEEECCBSSCCC-----------CCTTEECCBSCHHHHGGGCCSC-------
T ss_pred             CCceEEEECCCcHHHHHHHHHHHhCCCCCeEEEEeCCCcc-----------cCCCceEEeccccCHHHHHHhh-------
Confidence            468999999999999999999999998  99999998764           1136788899999887765543       


Q ss_pred             CCccEEEEccccCCcccccccCChHHHHHHHHhhhHHHHHHHHHHhhhhhhcCCeEEEEcCccccccCCCCccchHHHHH
Q 044010          124 GRLDHLVNNAGISSVALFEDIVNITDFKQIMNINFWGSVYTTRFAVPHLRYTKGKIVVLSSAASWLTAPRMSFYNASKAA  203 (248)
Q Consensus       124 g~id~vv~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~g~iV~isS~~~~~~~~~~~~Y~~sKaa  203 (248)
                        +|++||+||....       +.+++++.+++|+.++..+++++.+.   ..+++|++||..++.+  +...|+.+|.+
T Consensus        66 --~d~vi~~a~~~~~-------~~~~~~~~~~~n~~~~~~l~~~~~~~---~~~~~v~~Ss~~~~~~--~~~~y~~sK~~  131 (215)
T 2a35_A           66 --IDTAFCCLGTTIK-------EAGSEEAFRAVDFDLPLAVGKRALEM---GARHYLVVSALGADAK--SSIFYNRVKGE  131 (215)
T ss_dssp             --CSEEEECCCCCHH-------HHSSHHHHHHHHTHHHHHHHHHHHHT---TCCEEEEECCTTCCTT--CSSHHHHHHHH
T ss_pred             --hcEEEECeeeccc-------cCCCHHHHHHhhHHHHHHHHHHHHHc---CCCEEEEECCcccCCC--CccHHHHHHHH
Confidence              9999999996532       12456788899999999999987543   3368999999877643  35689999999


Q ss_pred             HHHHHHHHHHHhCCCeE-EEEEecCccccCccc
Q 044010          204 LVLFFETLRVELGSDVG-VTIVTPGFIESELTQ  235 (248)
Q Consensus       204 l~~l~~~la~~~~~~i~-v~~v~pg~v~T~~~~  235 (248)
                      .+.+++.+      +++ ++.+.||.+.++...
T Consensus       132 ~e~~~~~~------~~~~~~~vrp~~v~g~~~~  158 (215)
T 2a35_A          132 LEQALQEQ------GWPQLTIARPSLLFGPREE  158 (215)
T ss_dssp             HHHHHTTS------CCSEEEEEECCSEESTTSC
T ss_pred             HHHHHHHc------CCCeEEEEeCceeeCCCCc
Confidence            99987652      588 999999999987654

>3qvo_A NMRA family protein; structural genomics, PSI-biology, midwest center for structu genomics, MCSG, unknown function; HET: MNB; 2.30A {Shigella flexneri 2A}

Probab=99.80  E-value=8.6e-19  Score=144.65  Aligned_cols=147  Identities=16%  Similarity=0.194  Sum_probs=102.8

Q ss_pred             cCCCCCEEEEcCCCChHHHHHHHHHHHcC-CeEEEEeCCcchHHHHHHHHHhhCCCcEEEEEccCCCHHHHHHHHHHHHh
Q 044010           43 EDVSGKVVIITGASSGIGEHLAYEYARRG-ACLALCARREKSLEEVADTAREIGSPDVITIRADVSKVDDCRSLVEETMN  121 (248)
Q Consensus        43 ~~~~~k~~lVtGg~~gIG~aia~~l~~~G-~~V~l~~r~~~~~~~~~~~l~~~~~~~v~~~~~D~~~~~~~~~~~~~~~~  121 (248)
                      ..+..|++|||||+|+||++++++|+++| ++|++++|+.++.++       .....+.++.+|++|.++++++++    
T Consensus        19 ~~~~mk~vlVtGatG~iG~~l~~~L~~~G~~~V~~~~R~~~~~~~-------~~~~~~~~~~~Dl~d~~~~~~~~~----   87 (236)
T 3qvo_A           19 FQGHMKNVLILGAGGQIARHVINQLADKQTIKQTLFARQPAKIHK-------PYPTNSQIIMGDVLNHAALKQAMQ----   87 (236)
T ss_dssp             ---CCEEEEEETTTSHHHHHHHHHHTTCTTEEEEEEESSGGGSCS-------SCCTTEEEEECCTTCHHHHHHHHT----
T ss_pred             ecCcccEEEEEeCCcHHHHHHHHHHHhCCCceEEEEEcChhhhcc-------cccCCcEEEEecCCCHHHHHHHhc----
Confidence            34566899999999999999999999999 899999998765432       122378899999999999988876    


Q ss_pred             HcCCccEEEEccccCCcccccccCChHHHHHHHHhhhHHHHHHHHHHhhhhhhcC-CeEEEEcCccccccCCCC------
Q 044010          122 HFGRLDHLVNNAGISSVALFEDIVNITDFKQIMNINFWGSVYTTRFAVPHLRYTK-GKIVVLSSAASWLTAPRM------  194 (248)
Q Consensus       122 ~~g~id~vv~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~-g~iV~isS~~~~~~~~~~------  194 (248)
                         ++|++|||+|..         +.+              ...+.+++.+++.+ ++||++||..++.+.+..      
T Consensus        88 ---~~D~vv~~a~~~---------~~~--------------~~~~~~~~~~~~~~~~~iV~iSS~~~~~~~~~~~~~~~~  141 (236)
T 3qvo_A           88 ---GQDIVYANLTGE---------DLD--------------IQANSVIAAMKACDVKRLIFVLSLGIYDEVPGKFVEWNN  141 (236)
T ss_dssp             ---TCSEEEEECCST---------THH--------------HHHHHHHHHHHHTTCCEEEEECCCCC-------------
T ss_pred             ---CCCEEEEcCCCC---------chh--------------HHHHHHHHHHHHcCCCEEEEEecceecCCCCcccccchh
Confidence               689999999852         111              12456666666554 799999998876654432      


Q ss_pred             -------ccchHHHHHHHHHHHHHHHHhCCCeEEEEEecCccccCcccc
Q 044010          195 -------SFYNASKAALVLFFETLRVELGSDVGVTIVTPGFIESELTQG  236 (248)
Q Consensus       195 -------~~Y~~sKaal~~l~~~la~~~~~~i~v~~v~pg~v~T~~~~~  236 (248)
                             ..|..+|..+        .  ..++++++|.||++.|+....
T Consensus       142 ~~~~~~~~~~~~~~~~l--------~--~~gi~~~~vrPg~i~~~~~~~  180 (236)
T 3qvo_A          142 AVIGEPLKPFRRAADAI--------E--ASGLEYTILRPAWLTDEDIID  180 (236)
T ss_dssp             ---CGGGHHHHHHHHHH--------H--TSCSEEEEEEECEEECCSCCC
T ss_pred             hcccchHHHHHHHHHHH--------H--HCCCCEEEEeCCcccCCCCcc
Confidence                   1233332221        1  235999999999999876543

>2b69_A UDP-glucuronate decarboxylase 1; UDP-glucoronic acid decarboxylase, structural genomics, STRU genomics consortium, SGC, lyase; HET: MSE NAD UDP; 1.21A {Homo sapiens} SCOP: c.2.1.2 PDB: 4ef7_A*

Probab=99.79  E-value=7.3e-19  Score=152.54  Aligned_cols=167  Identities=14%  Similarity=0.111  Sum_probs=124.6

Q ss_pred             cCCCCCEEEEcCCCChHHHHHHHHHHHcCCeEEEEeCCcchHHHHHHHHHhhCCCcEEEEEccCCCHHHHHHHHHHHHhH
Q 044010           43 EDVSGKVVIITGASSGIGEHLAYEYARRGACLALCARREKSLEEVADTAREIGSPDVITIRADVSKVDDCRSLVEETMNH  122 (248)
Q Consensus        43 ~~~~~k~~lVtGg~~gIG~aia~~l~~~G~~V~l~~r~~~~~~~~~~~l~~~~~~~v~~~~~D~~~~~~~~~~~~~~~~~  122 (248)
                      .+++++++|||||+|+||.+++++|+++|++|++++|+.....+..+.+.  ...++.++.+|+++..            
T Consensus        23 ~~~~~~~vlVtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~--~~~~~~~~~~D~~~~~------------   88 (343)
T 2b69_A           23 MEKDRKRILITGGAGFVGSHLTDKLMMDGHEVTVVDNFFTGRKRNVEHWI--GHENFELINHDVVEPL------------   88 (343)
T ss_dssp             ----CCEEEEETTTSHHHHHHHHHHHHTTCEEEEEECCSSCCGGGTGGGT--TCTTEEEEECCTTSCC------------
T ss_pred             cccCCCEEEEEcCccHHHHHHHHHHHHCCCEEEEEeCCCccchhhhhhhc--cCCceEEEeCccCChh------------
Confidence            35788999999999999999999999999999999997543221111111  1236889999998852            


Q ss_pred             cCCccEEEEccccCCcccccccCChHHHHHHHHhhhHHHHHHHHHHhhhhhhcCCeEEEEcCcccccc------------
Q 044010          123 FGRLDHLVNNAGISSVALFEDIVNITDFKQIMNINFWGSVYTTRFAVPHLRYTKGKIVVLSSAASWLT------------  190 (248)
Q Consensus       123 ~g~id~vv~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~g~iV~isS~~~~~~------------  190 (248)
                      +.++|+|||+||.......     .+++++.+++|+.++.++++++.+.    +.++|++||...+..            
T Consensus        89 ~~~~d~vih~A~~~~~~~~-----~~~~~~~~~~n~~~~~~l~~a~~~~----~~~~v~~SS~~v~g~~~~~~~~E~~~~  159 (343)
T 2b69_A           89 YIEVDQIYHLASPASPPNY-----MYNPIKTLKTNTIGTLNMLGLAKRV----GARLLLASTSEVYGDPEVHPQSEDYWG  159 (343)
T ss_dssp             CCCCSEEEECCSCCSHHHH-----TTCHHHHHHHHHHHHHHHHHHHHHH----TCEEEEEEEGGGGBSCSSSSBCTTCCC
T ss_pred             hcCCCEEEECccccCchhh-----hhCHHHHHHHHHHHHHHHHHHHHHh----CCcEEEECcHHHhCCCCCCCCcccccc
Confidence            4579999999997653321     1345678899999999999987642    348999999765421            


Q ss_pred             ----CCCCccchHHHHHHHHHHHHHHHHhCCCeEEEEEecCccccCcc
Q 044010          191 ----APRMSFYNASKAALVLFFETLRVELGSDVGVTIVTPGFIESELT  234 (248)
Q Consensus       191 ----~~~~~~Y~~sKaal~~l~~~la~~~~~~i~v~~v~pg~v~T~~~  234 (248)
                          ..+...|+.+|.+.+.+++.++.++  +++++.+.||.+.++..
T Consensus       160 ~~~~~~~~~~Y~~sK~~~E~~~~~~~~~~--~~~~~ilrp~~v~G~~~  205 (343)
T 2b69_A          160 HVNPIGPRACYDEGKRVAETMCYAYMKQE--GVEVRVARIFNTFGPRM  205 (343)
T ss_dssp             BCCSSSTTHHHHHHHHHHHHHHHHHHHHH--CCCEEEEEECCEECTTC
T ss_pred             cCCCCCCCCchHHHHHHHHHHHHHHHHHh--CCcEEEEEEcceeCcCC
Confidence                2234569999999999999998876  48899999999887753

>3h2s_A Putative NADH-flavin reductase; Q03B84, NESG, LCR19, structural genomics, PSI-2, protein structure initiative; HET: NDP; 1.78A {Lactobacillus casei atcc 334}

Probab=99.78  E-value=2.9e-18  Score=139.74  Aligned_cols=149  Identities=15%  Similarity=0.161  Sum_probs=111.0

Q ss_pred             EEEEcCCCChHHHHHHHHHHHcCCeEEEEeCCcchHHHHHHHHHhhCCCcEEEEEccCCCHHHHHHHHHHHHhHcCCccE
Q 044010           49 VVIITGASSGIGEHLAYEYARRGACLALCARREKSLEEVADTAREIGSPDVITIRADVSKVDDCRSLVEETMNHFGRLDH  128 (248)
Q Consensus        49 ~~lVtGg~~gIG~aia~~l~~~G~~V~l~~r~~~~~~~~~~~l~~~~~~~v~~~~~D~~~~~~~~~~~~~~~~~~g~id~  128 (248)
                      ++|||||+|+||++++++|+++|++|++++|+.++.+..       ...++.++.+|++|.++         +.++++|+
T Consensus         2 kilVtGatG~iG~~l~~~L~~~g~~V~~~~R~~~~~~~~-------~~~~~~~~~~D~~d~~~---------~~~~~~d~   65 (224)
T 3h2s_A            2 KIAVLGATGRAGSAIVAEARRRGHEVLAVVRDPQKAADR-------LGATVATLVKEPLVLTE---------ADLDSVDA   65 (224)
T ss_dssp             EEEEETTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHH-------TCTTSEEEECCGGGCCH---------HHHTTCSE
T ss_pred             EEEEEcCCCHHHHHHHHHHHHCCCEEEEEEecccccccc-------cCCCceEEecccccccH---------hhcccCCE
Confidence            599999999999999999999999999999987654322       12368899999999987         22357999


Q ss_pred             EEEccccCCcccccccCChHHHHHHHHhhhHHHHHHHHHHhhhhhhcCCeEEEEcCccccccCCC--------------C
Q 044010          129 LVNNAGISSVALFEDIVNITDFKQIMNINFWGSVYTTRFAVPHLRYTKGKIVVLSSAASWLTAPR--------------M  194 (248)
Q Consensus       129 vv~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~g~iV~isS~~~~~~~~~--------------~  194 (248)
                      +||+||......     .       ..+|+.++..+    ++.+++.++++|++||..+..+.+.              .
T Consensus        66 vi~~ag~~~~~~-----~-------~~~n~~~~~~l----~~a~~~~~~~~v~~SS~~~~~~~~~~~~~~~~~~~~~~~~  129 (224)
T 3h2s_A           66 VVDALSVPWGSG-----R-------GYLHLDFATHL----VSLLRNSDTLAVFILGSASLAMPGADHPMILDFPESAASQ  129 (224)
T ss_dssp             EEECCCCCTTSS-----C-------THHHHHHHHHH----HHTCTTCCCEEEEECCGGGSBCTTCSSCGGGGCCGGGGGS
T ss_pred             EEECCccCCCcc-----h-------hhHHHHHHHHH----HHHHHHcCCcEEEEecceeeccCCCCccccccCCCCCccc
Confidence            999999862110     1       23466665444    4445544589999999877655443              5


Q ss_pred             ccchHHHHHHHHHHHHHHHHhCCCeEEEEEecCccccC
Q 044010          195 SFYNASKAALVLFFETLRVELGSDVGVTIVTPGFIESE  232 (248)
Q Consensus       195 ~~Y~~sKaal~~l~~~la~~~~~~i~v~~v~pg~v~T~  232 (248)
                      ..|+.+|.+.+.+ +.+.++  .+++++.+.||.+.++
T Consensus       130 ~~y~~sK~~~e~~-~~~~~~--~~i~~~ivrp~~v~g~  164 (224)
T 3h2s_A          130 PWYDGALYQYYEY-QFLQMN--ANVNWIGISPSEAFPS  164 (224)
T ss_dssp             TTHHHHHHHHHHH-HHHTTC--TTSCEEEEEECSBCCC
T ss_pred             hhhHHHHHHHHHH-HHHHhc--CCCcEEEEcCccccCC
Confidence            6899999998854 222222  3599999999999987

>3ajr_A NDP-sugar epimerase; L-threonine dehydrogenase, L-3- hydroxynorvaline, oxidoreductase; HET: NAD; 1.77A {Thermoplasma volcanium} PDB: 3a9w_A* 3a4v_A* 3a1n_A*

Probab=99.78  E-value=1.7e-18  Score=148.39  Aligned_cols=153  Identities=21%  Similarity=0.218  Sum_probs=121.9

Q ss_pred             EEEEcCCCChHHHHHHHHHHHc--CCeEEEEeCCcchHHHHHHHHHhhCCCcEEEEEccCCCHHHHHHHHHHHHhHcCCc
Q 044010           49 VVIITGASSGIGEHLAYEYARR--GACLALCARREKSLEEVADTAREIGSPDVITIRADVSKVDDCRSLVEETMNHFGRL  126 (248)
Q Consensus        49 ~~lVtGg~~gIG~aia~~l~~~--G~~V~l~~r~~~~~~~~~~~l~~~~~~~v~~~~~D~~~~~~~~~~~~~~~~~~g~i  126 (248)
                      ++|||||+|+||.+++++|+++  |++|++++|+.++.+            .+.++.+|++|.+++.+++++     .++
T Consensus         1 ~vlVtGatG~iG~~l~~~L~~~~~g~~V~~~~r~~~~~~------------~~~~~~~D~~d~~~~~~~~~~-----~~~   63 (317)
T 3ajr_A            1 MILVTGSSGQIGTELVPYLAEKYGKKNVIASDIVQRDTG------------GIKFITLDVSNRDEIDRAVEK-----YSI   63 (317)
T ss_dssp             CEEEESTTSTTHHHHHHHHHHHHCGGGEEEEESSCCCCT------------TCCEEECCTTCHHHHHHHHHH-----TTC
T ss_pred             CEEEEcCCcHHHHHHHHHHHHhcCCCEEEEecCCCcccc------------CceEEEecCCCHHHHHHHHhh-----cCC
Confidence            4899999999999999999998  889999998765421            345789999999999888875     279


Q ss_pred             cEEEEccccCCcccccccCChHHHHHHHHhhhHHHHHHHHHHhhhhhhcCCeEEEEcCccccccCC------------CC
Q 044010          127 DHLVNNAGISSVALFEDIVNITDFKQIMNINFWGSVYTTRFAVPHLRYTKGKIVVLSSAASWLTAP------------RM  194 (248)
Q Consensus       127 d~vv~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~g~iV~isS~~~~~~~~------------~~  194 (248)
                      |+|||+||.....      ..+++++.+++|+.++.++++++.+.   ..+++|++||...+.+..            +.
T Consensus        64 d~vih~a~~~~~~------~~~~~~~~~~~n~~~~~~l~~a~~~~---~~~~~v~~SS~~~~~~~~~~~~~~e~~~~~p~  134 (317)
T 3ajr_A           64 DAIFHLAGILSAK------GEKDPALAYKVNMNGTYNILEAAKQH---RVEKVVIPSTIGVFGPETPKNKVPSITITRPR  134 (317)
T ss_dssp             CEEEECCCCCHHH------HHHCHHHHHHHHHHHHHHHHHHHHHT---TCCEEEEEEEGGGCCTTSCSSSBCSSSCCCCC
T ss_pred             cEEEECCcccCCc------cccChHHHhhhhhHHHHHHHHHHHHc---CCCEEEEecCHHHhCCCCCCCCccccccCCCC
Confidence            9999999975421      22456788999999999999987542   336999999987764321            35


Q ss_pred             ccchHHHHHHHHHHHHHHHHhCCCeEEEEEecCcc
Q 044010          195 SFYNASKAALVLFFETLRVELGSDVGVTIVTPGFI  229 (248)
Q Consensus       195 ~~Y~~sKaal~~l~~~la~~~~~~i~v~~v~pg~v  229 (248)
                      ..|+.+|.+.+.+++.++.++  +++++.+.|+.+
T Consensus       135 ~~Y~~sK~~~e~~~~~~~~~~--~~~~~~lR~~~~  167 (317)
T 3ajr_A          135 TMFGVTKIAAELLGQYYYEKF--GLDVRSLRYPGI  167 (317)
T ss_dssp             SHHHHHHHHHHHHHHHHHHHH--CCEEEEEEECEE
T ss_pred             chHHHHHHHHHHHHHHHHHhc--CCeEEEEecCcE
Confidence            689999999999999998876  478888875444

>4dqv_A Probable peptide synthetase NRP (peptide synthase; GXXGXXG motif, rossmann fold, short chain dehydrogenase/REDU family, reductase; 2.30A {Mycobacterium tuberculosis}

Probab=99.78  E-value=4.4e-18  Score=154.50  Aligned_cols=168  Identities=20%  Similarity=0.222  Sum_probs=127.9

Q ss_pred             cCCCCCEEEEcCCCChHHHHHHHHHHHc---CCeEEEEeCCcchHHHHHHHHHh---------------hCCCcEEEEEc
Q 044010           43 EDVSGKVVIITGASSGIGEHLAYEYARR---GACLALCARREKSLEEVADTARE---------------IGSPDVITIRA  104 (248)
Q Consensus        43 ~~~~~k~~lVtGg~~gIG~aia~~l~~~---G~~V~l~~r~~~~~~~~~~~l~~---------------~~~~~v~~~~~  104 (248)
                      ...++|++|||||+|+||.+++++|+++   |++|++++|+.+..+.. +.+.+               ....++.++.+
T Consensus        69 ~~~~~~~VLVTGatG~IG~~l~~~Ll~~~~~g~~V~~l~R~~~~~~~~-~~l~~~~~~~~~~~~~~~~~~~~~~v~~v~~  147 (478)
T 4dqv_A           69 PSPELRTVLLTGATGFLGRYLVLELLRRLDVDGRLICLVRAESDEDAR-RRLEKTFDSGDPELLRHFKELAADRLEVVAG  147 (478)
T ss_dssp             CCSCCCEEEEECTTSHHHHHHHHHHHHHSCTTCEEEEEECSSSHHHHH-HHHHGGGCSSCHHHHHHHHHHHTTTEEEEEC
T ss_pred             CCCCCCEEEEECCCcHHHHHHHHHHHhcCCCCCEEEEEECCCCcHHHH-HHHHHHHHhcchhhhhhhhhhccCceEEEEe
Confidence            4568999999999999999999999999   89999999987654322 22221               11247999999


Q ss_pred             cCC------CHHHHHHHHHHHHhHcCCccEEEEccccCCcccccccCChHHHHHHHHhhhHHHHHHHHHHhhhhhhcCCe
Q 044010          105 DVS------KVDDCRSLVEETMNHFGRLDHLVNNAGISSVALFEDIVNITDFKQIMNINFWGSVYTTRFAVPHLRYTKGK  178 (248)
Q Consensus       105 D~~------~~~~~~~~~~~~~~~~g~id~vv~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~g~  178 (248)
                      |++      +.++++++++       ++|+|||+||....         +++++.+++|+.++.++++.+...   ..++
T Consensus       148 Dl~~~~~gld~~~~~~~~~-------~~D~Vih~Aa~~~~---------~~~~~~~~~Nv~gt~~ll~aa~~~---~~~~  208 (478)
T 4dqv_A          148 DKSEPDLGLDQPMWRRLAE-------TVDLIVDSAAMVNA---------FPYHELFGPNVAGTAELIRIALTT---KLKP  208 (478)
T ss_dssp             CTTSGGGGCCHHHHHHHHH-------HCCEEEECCSSCSB---------SSCCEEHHHHHHHHHHHHHHHTSS---SCCC
T ss_pred             ECCCcccCCCHHHHHHHHc-------CCCEEEECccccCC---------cCHHHHHHHHHHHHHHHHHHHHhC---CCCe
Confidence            999      5556666654       59999999998653         122356788999999999987642   2358


Q ss_pred             EEEEcCccccccCCC----------------------CccchHHHHHHHHHHHHHHHHhCCCeEEEEEecCccccC
Q 044010          179 IVVLSSAASWLTAPR----------------------MSFYNASKAALVLFFETLRVELGSDVGVTIVTPGFIESE  232 (248)
Q Consensus       179 iV~isS~~~~~~~~~----------------------~~~Y~~sKaal~~l~~~la~~~~~~i~v~~v~pg~v~T~  232 (248)
                      +|++||.+.+.....                      ...|+.||.+.+.+++.++.+.  +++++.+.||.|..+
T Consensus       209 ~V~iSS~~v~~~~~~~~~~E~~~~~p~~~~~~~~~~~~~~Y~~sK~~~E~~~~~~~~~~--gi~~~ivRpg~v~G~  282 (478)
T 4dqv_A          209 FTYVSTADVGAAIEPSAFTEDADIRVISPTRTVDGGWAGGYGTSKWAGEVLLREANDLC--ALPVAVFRCGMILAD  282 (478)
T ss_dssp             EEEEEEGGGGTTSCTTTCCSSSCHHHHCCEEECCTTSEECHHHHHHHHHHHHHHHHHHH--CCCEEEEEECEEECC
T ss_pred             EEEEeehhhcCccCCCCcCCcccccccCcccccccccccchHHHHHHHHHHHHHHHHHh--CCCeEEEECceeeCC
Confidence            999999765432111                      1339999999999999998876  489999999999764

>1e6u_A GDP-fucose synthetase; epimerase/reductase, SDR, RED; HET: NAP; 1.45A {Escherichia coli} SCOP: c.2.1.2 PDB: 1e7q_A* 1bsv_A* 1fxs_A* 1gfs_A 1e7s_A* 1bws_A* 1e7r_A*

Probab=99.78  E-value=4.1e-18  Score=146.15  Aligned_cols=155  Identities=15%  Similarity=0.144  Sum_probs=123.4

Q ss_pred             CCCCEEEEcCCCChHHHHHHHHHHHcCCeEEEEeCCcchHHHHHHHHHhhCCCcEEEEEccCCCHHHHHHHHHHHHhHcC
Q 044010           45 VSGKVVIITGASSGIGEHLAYEYARRGACLALCARREKSLEEVADTAREIGSPDVITIRADVSKVDDCRSLVEETMNHFG  124 (248)
Q Consensus        45 ~~~k~~lVtGg~~gIG~aia~~l~~~G~~V~l~~r~~~~~~~~~~~l~~~~~~~v~~~~~D~~~~~~~~~~~~~~~~~~g  124 (248)
                      |+++++|||||+|+||.+++++|+++|++|++++|+.                     .+|++|.+++.+++++.     
T Consensus         1 M~~~~ilVtGatG~iG~~l~~~L~~~g~~v~~~~r~~---------------------~~D~~d~~~~~~~~~~~-----   54 (321)
T 1e6u_A            1 MAKQRVFIAGHRGMVGSAIRRQLEQRGDVELVLRTRD---------------------ELNLLDSRAVHDFFASE-----   54 (321)
T ss_dssp             -CCEEEEEETTTSHHHHHHHHHHTTCTTEEEECCCTT---------------------TCCTTCHHHHHHHHHHH-----
T ss_pred             CCCCEEEEECCCcHHHHHHHHHHHhCCCeEEEEecCc---------------------cCCccCHHHHHHHHHhc-----
Confidence            3568999999999999999999999999999988752                     26999999998888754     


Q ss_pred             CccEEEEccccCCcccccccCChHHHHHHHHhhhHHHHHHHHHHhhhhhhcCCeEEEEcCccccccC-------------
Q 044010          125 RLDHLVNNAGISSVALFEDIVNITDFKQIMNINFWGSVYTTRFAVPHLRYTKGKIVVLSSAASWLTA-------------  191 (248)
Q Consensus       125 ~id~vv~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~g~iV~isS~~~~~~~-------------  191 (248)
                      ++|+|||+||......    ...+++++.+++|+.++.++++++.+.   ..+++|++||...+...             
T Consensus        55 ~~d~vih~a~~~~~~~----~~~~~~~~~~~~n~~~~~~l~~~~~~~---~~~~~v~~SS~~vyg~~~~~~~~E~~~~~~  127 (321)
T 1e6u_A           55 RIDQVYLAAAKVGGIV----ANNTYPADFIYQNMMIESNIIHAAHQN---DVNKLLFLGSSCIYPKLAKQPMAESELLQG  127 (321)
T ss_dssp             CCSEEEECCCCCCCHH----HHHHCHHHHHHHHHHHHHHHHHHHHHT---TCCEEEEECCGGGSCTTCCSSBCGGGTTSS
T ss_pred             CCCEEEEcCeecCCcc----hhhhCHHHHHHHHHHHHHHHHHHHHHh---CCCeEEEEccHHHcCCCCCCCcCccccccC
Confidence            7999999999754211    123456788999999999999987642   23599999998765321             


Q ss_pred             CC---CccchHHHHHHHHHHHHHHHHhCCCeEEEEEecCccccCcc
Q 044010          192 PR---MSFYNASKAALVLFFETLRVELGSDVGVTIVTPGFIESELT  234 (248)
Q Consensus       192 ~~---~~~Y~~sKaal~~l~~~la~~~~~~i~v~~v~pg~v~T~~~  234 (248)
                      +.   ...|+.+|.+.+.+++.++.++  +++++.+.||.+..+-.
T Consensus       128 ~~~p~~~~Y~~sK~~~E~~~~~~~~~~--~~~~~ilrp~~v~G~~~  171 (321)
T 1e6u_A          128 TLEPTNEPYAIAKIAGIKLCESYNRQY--GRDYRSVMPTNLYGPHD  171 (321)
T ss_dssp             CCCGGGHHHHHHHHHHHHHHHHHHHHH--CCEEEEEEECEEESTTC
T ss_pred             CCCCCCCccHHHHHHHHHHHHHHHHHh--CCCEEEEEeCCcCCcCC
Confidence            11   2489999999999999999876  48999999999887654

>1vl0_A DTDP-4-dehydrorhamnose reductase, RFBD ortholog; structural joint center for structural genomics, JCSG, protein structu initiative; HET: NAI UNL; 2.05A {Clostridium acetobutylicum} SCOP: c.2.1.2

Probab=99.77  E-value=2.7e-18  Score=145.49  Aligned_cols=146  Identities=17%  Similarity=0.195  Sum_probs=114.6

Q ss_pred             CCCCCEEEEcCCCChHHHHHHHHHHHcCCeEEEEeCCcchHHHHHHHHHhhCCCcEEEEEccCCCHHHHHHHHHHHHhHc
Q 044010           44 DVSGKVVIITGASSGIGEHLAYEYARRGACLALCARREKSLEEVADTAREIGSPDVITIRADVSKVDDCRSLVEETMNHF  123 (248)
Q Consensus        44 ~~~~k~~lVtGg~~gIG~aia~~l~~~G~~V~l~~r~~~~~~~~~~~l~~~~~~~v~~~~~D~~~~~~~~~~~~~~~~~~  123 (248)
                      .-..+++|||||+|+||.+++++|+++|++|++++|+                      .+|++|.++++++++..    
T Consensus         9 ~~~~~~vlVtGatG~iG~~l~~~L~~~g~~V~~~~r~----------------------~~Dl~d~~~~~~~~~~~----   62 (292)
T 1vl0_A            9 HHHHMKILITGANGQLGREIQKQLKGKNVEVIPTDVQ----------------------DLDITNVLAVNKFFNEK----   62 (292)
T ss_dssp             ---CEEEEEESTTSHHHHHHHHHHTTSSEEEEEECTT----------------------TCCTTCHHHHHHHHHHH----
T ss_pred             ccccceEEEECCCChHHHHHHHHHHhCCCeEEeccCc----------------------cCCCCCHHHHHHHHHhc----
Confidence            3456799999999999999999999999999999986                      27999999998888764    


Q ss_pred             CCccEEEEccccCCcccccccCChHHHHHHHHhhhHHHHHHHHHHhhhhhhcCCeEEEEcCccccccCC-----------
Q 044010          124 GRLDHLVNNAGISSVALFEDIVNITDFKQIMNINFWGSVYTTRFAVPHLRYTKGKIVVLSSAASWLTAP-----------  192 (248)
Q Consensus       124 g~id~vv~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~g~iV~isS~~~~~~~~-----------  192 (248)
                       ++|++||+||.....     .+.+++++.+++|+.++.++++++.+.    +.++|++||.+.+.+.+           
T Consensus        63 -~~d~vih~A~~~~~~-----~~~~~~~~~~~~nv~~~~~l~~a~~~~----~~~iv~~SS~~v~~~~~~~~~~E~~~~~  132 (292)
T 1vl0_A           63 -KPNVVINCAAHTAVD-----KCEEQYDLAYKINAIGPKNLAAAAYSV----GAEIVQISTDYVFDGEAKEPITEFDEVN  132 (292)
T ss_dssp             -CCSEEEECCCCCCHH-----HHHHCHHHHHHHHTHHHHHHHHHHHHH----TCEEEEEEEGGGSCSCCSSCBCTTSCCC
T ss_pred             -CCCEEEECCccCCHH-----HHhcCHHHHHHHHHHHHHHHHHHHHHc----CCeEEEechHHeECCCCCCCCCCCCCCC
Confidence             799999999975431     123667889999999999999998652    24999999987654322           


Q ss_pred             CCccchHHHHHHHHHHHHHHHHhCCCeEEEEEecCcccc
Q 044010          193 RMSFYNASKAALVLFFETLRVELGSDVGVTIVTPGFIES  231 (248)
Q Consensus       193 ~~~~Y~~sKaal~~l~~~la~~~~~~i~v~~v~pg~v~T  231 (248)
                      +...|+.+|.+.+.+++.++.+      +..+.|+.+..
T Consensus       133 ~~~~Y~~sK~~~E~~~~~~~~~------~~~lR~~~v~G  165 (292)
T 1vl0_A          133 PQSAYGKTKLEGENFVKALNPK------YYIVRTAWLYG  165 (292)
T ss_dssp             CCSHHHHHHHHHHHHHHHHCSS------EEEEEECSEES
T ss_pred             CccHHHHHHHHHHHHHHhhCCC------eEEEeeeeeeC
Confidence            3568999999999999887542      34455555543

>3m2p_A UDP-N-acetylglucosamine 4-epimerase; SGXNY, 11155J, isomerase, structural genomics, PSI-2, protein structure initiative; HET: UDP; 2.95A {Bacillus cereus}

Probab=99.77  E-value=8.9e-18  Score=143.73  Aligned_cols=157  Identities=12%  Similarity=0.037  Sum_probs=123.2

Q ss_pred             CCEEEEcCCCChHHHHHHHHHHHcCCeEEEEeCCcchHHHHHHHHHhhCCCcEEEEEccCCCHHHHHHHHHHHHhHcCCc
Q 044010           47 GKVVIITGASSGIGEHLAYEYARRGACLALCARREKSLEEVADTAREIGSPDVITIRADVSKVDDCRSLVEETMNHFGRL  126 (248)
Q Consensus        47 ~k~~lVtGg~~gIG~aia~~l~~~G~~V~l~~r~~~~~~~~~~~l~~~~~~~v~~~~~D~~~~~~~~~~~~~~~~~~g~i  126 (248)
                      ++++|||||+|+||.+++++|+++|++|++++|+....+     ++     ++.++.+|++ .+++.++++       ++
T Consensus         2 ~~~vlVtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~-----~~-----~~~~~~~Dl~-~~~~~~~~~-------~~   63 (311)
T 3m2p_A            2 SLKIAVTGGTGFLGQYVVESIKNDGNTPIILTRSIGNKA-----IN-----DYEYRVSDYT-LEDLINQLN-------DV   63 (311)
T ss_dssp             CCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESCCC---------------CCEEEECCCC-HHHHHHHTT-------TC
T ss_pred             CCEEEEECCCcHHHHHHHHHHHhCCCEEEEEeCCCCccc-----CC-----ceEEEEcccc-HHHHHHhhc-------CC
Confidence            378999999999999999999999999999999843322     21     5788999999 888877765       79


Q ss_pred             cEEEEccccCCcccccccCChHHHHHHHHhhhHHHHHHHHHHhhhhhhcCCeEEEEcCccccccC-----------CCCc
Q 044010          127 DHLVNNAGISSVALFEDIVNITDFKQIMNINFWGSVYTTRFAVPHLRYTKGKIVVLSSAASWLTA-----------PRMS  195 (248)
Q Consensus       127 d~vv~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~g~iV~isS~~~~~~~-----------~~~~  195 (248)
                      |+|||+||.....         ++++.+++|+.++.++++++...   ...++|++||...+...           .+..
T Consensus        64 d~Vih~a~~~~~~---------~~~~~~~~n~~~~~~ll~a~~~~---~~~r~v~~SS~~vyg~~~~~~~~E~~~~~p~~  131 (311)
T 3m2p_A           64 DAVVHLAATRGSQ---------GKISEFHDNEILTQNLYDACYEN---NISNIVYASTISAYSDETSLPWNEKELPLPDL  131 (311)
T ss_dssp             SEEEECCCCCCSS---------SCGGGTHHHHHHHHHHHHHHHHT---TCCEEEEEEEGGGCCCGGGCSBCTTSCCCCSS
T ss_pred             CEEEEccccCCCC---------ChHHHHHHHHHHHHHHHHHHHHc---CCCEEEEEccHHHhCCCCCCCCCCCCCCCCCc
Confidence            9999999976543         22356778999999998887532   23589999997665322           1346


Q ss_pred             cchHHHHHHHHHHHHHHHHhCCCeEEEEEecCccccCccc
Q 044010          196 FYNASKAALVLFFETLRVELGSDVGVTIVTPGFIESELTQ  235 (248)
Q Consensus       196 ~Y~~sKaal~~l~~~la~~~~~~i~v~~v~pg~v~T~~~~  235 (248)
                      .|+.+|.+.+.+++.++.+.  ++++..+.||.+..+...
T Consensus       132 ~Y~~sK~~~E~~~~~~~~~~--g~~~~ilRp~~v~G~~~~  169 (311)
T 3m2p_A          132 MYGVSKLACEHIGNIYSRKK--GLCIKNLRFAHLYGFNEK  169 (311)
T ss_dssp             HHHHHHHHHHHHHHHHHHHS--CCEEEEEEECEEECSCC-
T ss_pred             hhHHHHHHHHHHHHHHHHHc--CCCEEEEeeCceeCcCCC
Confidence            89999999999999998875  589999999998876543

>2ggs_A 273AA long hypothetical DTDP-4-dehydrorhamnose reductase; alpha, beta, oxidoreductase; HET: NDP; 1.70A {Sulfolobus tokodaii}

Probab=99.77  E-value=3.7e-18  Score=143.07  Aligned_cols=143  Identities=17%  Similarity=0.131  Sum_probs=115.1

Q ss_pred             EEEEcCCCChHHHHHHHHHHHcCCeEEEEeCCcchHHHHHHHHHhhCCCcEEEEEccCCCHHHHHHHHHHHHhHcCCccE
Q 044010           49 VVIITGASSGIGEHLAYEYARRGACLALCARREKSLEEVADTAREIGSPDVITIRADVSKVDDCRSLVEETMNHFGRLDH  128 (248)
Q Consensus        49 ~~lVtGg~~gIG~aia~~l~~~G~~V~l~~r~~~~~~~~~~~l~~~~~~~v~~~~~D~~~~~~~~~~~~~~~~~~g~id~  128 (248)
                      +++||||+|+||.+++++|+ +|++|++++|+.+..           . +   +.+|++|.++++++++..     ++|+
T Consensus         2 ~ilVtGatG~iG~~l~~~L~-~g~~V~~~~r~~~~~-----------~-~---~~~Dl~~~~~~~~~~~~~-----~~d~   60 (273)
T 2ggs_A            2 RTLITGASGQLGIELSRLLS-ERHEVIKVYNSSEIQ-----------G-G---YKLDLTDFPRLEDFIIKK-----RPDV   60 (273)
T ss_dssp             CEEEETTTSHHHHHHHHHHT-TTSCEEEEESSSCCT-----------T-C---EECCTTSHHHHHHHHHHH-----CCSE
T ss_pred             EEEEECCCChhHHHHHHHHh-cCCeEEEecCCCcCC-----------C-C---ceeccCCHHHHHHHHHhc-----CCCE
Confidence            68999999999999999999 589999999987421           1 2   789999999999988765     6999


Q ss_pred             EEEccccCCcccccccCChHHHHHHHHhhhHHHHHHHHHHhhhhhhcCCeEEEEcCccccccCC----------CCccch
Q 044010          129 LVNNAGISSVALFEDIVNITDFKQIMNINFWGSVYTTRFAVPHLRYTKGKIVVLSSAASWLTAP----------RMSFYN  198 (248)
Q Consensus       129 vv~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~g~iV~isS~~~~~~~~----------~~~~Y~  198 (248)
                      +||+||.....     .+.+++++.+++|+.++.++++++.+    .++++|++||..++.+.+          +...|+
T Consensus        61 vi~~a~~~~~~-----~~~~~~~~~~~~n~~~~~~l~~~~~~----~~~~iv~~SS~~~~~~~~~~~~e~~~~~~~~~Y~  131 (273)
T 2ggs_A           61 IINAAAMTDVD-----KCEIEKEKAYKINAEAVRHIVRAGKV----IDSYIVHISTDYVFDGEKGNYKEEDIPNPINYYG  131 (273)
T ss_dssp             EEECCCCCCHH-----HHHHCHHHHHHHHTHHHHHHHHHHHH----TTCEEEEEEEGGGSCSSSCSBCTTSCCCCSSHHH
T ss_pred             EEECCcccChh-----hhhhCHHHHHHHhHHHHHHHHHHHHH----hCCeEEEEecceeEcCCCCCcCCCCCCCCCCHHH
Confidence            99999976432     12467889999999999999999863    346999999988765433          256899


Q ss_pred             HHHHHHHHHHHHHHHHhCCC-eEEEEEe
Q 044010          199 ASKAALVLFFETLRVELGSD-VGVTIVT  225 (248)
Q Consensus       199 ~sKaal~~l~~~la~~~~~~-i~v~~v~  225 (248)
                      .+|++.+.+++.    .... +|++.|.
T Consensus       132 ~sK~~~e~~~~~----~~~~~iR~~~v~  155 (273)
T 2ggs_A          132 LSKLLGETFALQ----DDSLIIRTSGIF  155 (273)
T ss_dssp             HHHHHHHHHHCC----TTCEEEEECCCB
T ss_pred             HHHHHHHHHHhC----CCeEEEeccccc
Confidence            999999999887    2222 7777666

>1z7e_A Protein aRNA; rossmann fold, OB-like fold, hydrolase; HET: ATP UGA; 3.00A {Escherichia coli} SCOP: b.46.1.1 c.2.1.2 c.65.1.1

Probab=99.76  E-value=6.3e-18  Score=159.11  Aligned_cols=166  Identities=15%  Similarity=0.140  Sum_probs=129.7

Q ss_pred             CCCCEEEEcCCCChHHHHHHHHHHHc-CCeEEEEeCCcchHHHHHHHHHhhCCCcEEEEEccCCCHHH-HHHHHHHHHhH
Q 044010           45 VSGKVVIITGASSGIGEHLAYEYARR-GACLALCARREKSLEEVADTAREIGSPDVITIRADVSKVDD-CRSLVEETMNH  122 (248)
Q Consensus        45 ~~~k~~lVtGg~~gIG~aia~~l~~~-G~~V~l~~r~~~~~~~~~~~l~~~~~~~v~~~~~D~~~~~~-~~~~~~~~~~~  122 (248)
                      ++++++|||||+|+||.+++++|+++ |++|++++|+.++.+..    .  ...++.++.+|++|.++ ++++++     
T Consensus       313 ~~~~~VLVTGatG~IG~~l~~~Ll~~~g~~V~~~~r~~~~~~~~----~--~~~~v~~v~~Dl~d~~~~~~~~~~-----  381 (660)
T 1z7e_A          313 RRRTRVLILGVNGFIGNHLTERLLREDHYEVYGLDIGSDAISRF----L--NHPHFHFVEGDISIHSEWIEYHVK-----  381 (660)
T ss_dssp             -CCEEEEEETTTSHHHHHHHHHHHHSSSEEEEEEESCCTTTGGG----T--TCTTEEEEECCTTTCHHHHHHHHH-----
T ss_pred             ccCceEEEEcCCcHHHHHHHHHHHhcCCCEEEEEEcCchhhhhh----c--cCCceEEEECCCCCcHHHHHHhhc-----
Confidence            47789999999999999999999998 89999999987653321    1  12368899999999765 555554     


Q ss_pred             cCCccEEEEccccCCcccccccCChHHHHHHHHhhhHHHHHHHHHHhhhhhhcCCeEEEEcCccccccCC----------
Q 044010          123 FGRLDHLVNNAGISSVALFEDIVNITDFKQIMNINFWGSVYTTRFAVPHLRYTKGKIVVLSSAASWLTAP----------  192 (248)
Q Consensus       123 ~g~id~vv~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~g~iV~isS~~~~~~~~----------  192 (248)
                        ++|+|||+||...+..     ..+++++.+++|+.++.++++++.+.    ++++|++||...+...+          
T Consensus       382 --~~D~Vih~Aa~~~~~~-----~~~~~~~~~~~Nv~gt~~ll~aa~~~----~~r~V~~SS~~vyg~~~~~~~~E~~~~  450 (660)
T 1z7e_A          382 --KCDVVLPLVAIATPIE-----YTRNPLRVFELDFEENLRIIRYCVKY----RKRIIFPSTSEVYGMCSDKYFDEDHSN  450 (660)
T ss_dssp             --HCSEEEECCCCCCTHH-----HHHSHHHHHHHHTHHHHHHHHHHHHT----TCEEEEECCGGGGBTCCSSSBCTTTCC
T ss_pred             --CCCEEEECceecCccc-----cccCHHHHHHhhhHHHHHHHHHHHHh----CCEEEEEecHHHcCCCCCcccCCCccc
Confidence              5899999999764321     12456788999999999999887643    27999999977653211          


Q ss_pred             --------CCccchHHHHHHHHHHHHHHHHhCCCeEEEEEecCccccCcc
Q 044010          193 --------RMSFYNASKAALVLFFETLRVELGSDVGVTIVTPGFIESELT  234 (248)
Q Consensus       193 --------~~~~Y~~sKaal~~l~~~la~~~~~~i~v~~v~pg~v~T~~~  234 (248)
                              ....|+.||.+.+.+++.++.++  +++++.+.||.+.++..
T Consensus       451 ~~~~p~~~p~~~Y~~sK~~~E~~~~~~~~~~--gi~~~ilRpg~v~Gp~~  498 (660)
T 1z7e_A          451 LIVGPVNKPRWIYSVSKQLLDRVIWAYGEKE--GLQFTLFRPFNWMGPRL  498 (660)
T ss_dssp             EEECCTTCTTHHHHHHHHHHHHHHHHHHHHH--CCCEEEEEECSEESTTS
T ss_pred             cccCcccCCCCCcHHHHHHHHHHHHHHHHHc--CCCEEEECCCcccCCCc
Confidence                    12269999999999999998886  58999999999988764

>3ew7_A LMO0794 protein; Q8Y8U8_lismo, putative NAD-dependent epimerase/dehydratase, LMR162, NESG, structural genomics, PSI-2; 2.73A {Listeria monocytogenes}

Probab=99.76  E-value=6.3e-18  Score=137.22  Aligned_cols=147  Identities=18%  Similarity=0.231  Sum_probs=106.6

Q ss_pred             EEEEcCCCChHHHHHHHHHHHcCCeEEEEeCCcchHHHHHHHHHhhCCCcEEEEEccCCCHHHHHHHHHHHHhHcCCccE
Q 044010           49 VVIITGASSGIGEHLAYEYARRGACLALCARREKSLEEVADTAREIGSPDVITIRADVSKVDDCRSLVEETMNHFGRLDH  128 (248)
Q Consensus        49 ~~lVtGg~~gIG~aia~~l~~~G~~V~l~~r~~~~~~~~~~~l~~~~~~~v~~~~~D~~~~~~~~~~~~~~~~~~g~id~  128 (248)
                      +++||||+|+||.+++++|+++|++|++++|+.++.+..    .    ..+.++.+|++|.++         +.++++|+
T Consensus         2 kvlVtGatG~iG~~l~~~L~~~g~~V~~~~R~~~~~~~~----~----~~~~~~~~D~~d~~~---------~~~~~~d~   64 (221)
T 3ew7_A            2 KIGIIGATGRAGSRILEEAKNRGHEVTAIVRNAGKITQT----H----KDINILQKDIFDLTL---------SDLSDQNV   64 (221)
T ss_dssp             EEEEETTTSHHHHHHHHHHHHTTCEEEEEESCSHHHHHH----C----SSSEEEECCGGGCCH---------HHHTTCSE
T ss_pred             eEEEEcCCchhHHHHHHHHHhCCCEEEEEEcCchhhhhc----c----CCCeEEeccccChhh---------hhhcCCCE
Confidence            589999999999999999999999999999997654432    1    368899999999987         22357999


Q ss_pred             EEEccccCCcccccccCChHHHHHHHHhhhHHHHHHHHHHhhhhhhc-CCeEEEEcCccccccCC------------CCc
Q 044010          129 LVNNAGISSVALFEDIVNITDFKQIMNINFWGSVYTTRFAVPHLRYT-KGKIVVLSSAASWLTAP------------RMS  195 (248)
Q Consensus       129 vv~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~-~g~iV~isS~~~~~~~~------------~~~  195 (248)
                      +||+||.....              ...|+.+...++++    +++. .+++|++||..++.+.+            +..
T Consensus        65 vi~~ag~~~~~--------------~~~~~~~~~~l~~a----~~~~~~~~~v~~SS~~~~~~~~~~~~~~~~~~~~~~~  126 (221)
T 3ew7_A           65 VVDAYGISPDE--------------AEKHVTSLDHLISV----LNGTVSPRLLVVGGAASLQIDEDGNTLLESKGLREAP  126 (221)
T ss_dssp             EEECCCSSTTT--------------TTSHHHHHHHHHHH----HCSCCSSEEEEECCCC-------------------CC
T ss_pred             EEECCcCCccc--------------cchHHHHHHHHHHH----HHhcCCceEEEEecceEEEcCCCCccccccCCCCCHH
Confidence            99999984211              23355555555554    4444 47999999988765443            235


Q ss_pred             cchHHHHHHHHHHHHHHHHhCCCeEEEEEecCccccC
Q 044010          196 FYNASKAALVLFFETLRVELGSDVGVTIVTPGFIESE  232 (248)
Q Consensus       196 ~Y~~sKaal~~l~~~la~~~~~~i~v~~v~pg~v~T~  232 (248)
                      .|+.+|.+.+.+ ..+.. ...+++++.+.||.+.++
T Consensus       127 ~y~~~k~~~e~~-~~~~~-~~~gi~~~ivrp~~v~g~  161 (221)
T 3ew7_A          127 YYPTARAQAKQL-EHLKS-HQAEFSWTYISPSAMFEP  161 (221)
T ss_dssp             CSCCHHHHHHHH-HHHHT-TTTTSCEEEEECSSCCCC
T ss_pred             HHHHHHHHHHHH-HHHHh-hccCccEEEEeCcceecC
Confidence            699999999987 33332 123599999999999886

>1eq2_A ADP-L-glycero-D-mannoheptose 6-epimerase; N-terminal domain rossmann fold, C-terminal mixed alpha/beta domain; HET: NAP ADQ; 2.00A {Escherichia coli} SCOP: c.2.1.2

Probab=99.75  E-value=1.1e-17  Score=142.56  Aligned_cols=163  Identities=17%  Similarity=0.163  Sum_probs=124.2

Q ss_pred             EEEEcCCCChHHHHHHHHHHHcC-CeEEEEeCCcchHHHHHHHHHhhCCCcEEEEEccCCCHHHHHHHHHHHHhHcCCcc
Q 044010           49 VVIITGASSGIGEHLAYEYARRG-ACLALCARREKSLEEVADTAREIGSPDVITIRADVSKVDDCRSLVEETMNHFGRLD  127 (248)
Q Consensus        49 ~~lVtGg~~gIG~aia~~l~~~G-~~V~l~~r~~~~~~~~~~~l~~~~~~~v~~~~~D~~~~~~~~~~~~~~~~~~g~id  127 (248)
                      ++|||||+|+||.+++++|+++| ++|++++|+.....  .+.+.     .+. +.+|++|.++++++++..  .++++|
T Consensus         1 ~vlVtGatG~iG~~l~~~L~~~g~~~V~~~~r~~~~~~--~~~~~-----~~~-~~~d~~~~~~~~~~~~~~--~~~~~d   70 (310)
T 1eq2_A            1 MIIVTGGAGFIGSNIVKALNDKGITDILVVDNLKDGTK--FVNLV-----DLN-IADYMDKEDFLIQIMAGE--EFGDVE   70 (310)
T ss_dssp             CEEEETTTSHHHHHHHHHHHTTTCCCEEEEECCSSGGG--GHHHH-----TSC-CSEEEEHHHHHHHHHTTC--CCSSCC
T ss_pred             CEEEEcCccHHHHHHHHHHHHCCCcEEEEEccCCCCch--hhhcC-----cce-eccccccHHHHHHHHhcc--ccCCCc
Confidence            48999999999999999999999 89999999765421  11122     112 678999888877766421  023699


Q ss_pred             EEEEccccCCcccccccCChHHHHHHHHhhhHHHHHHHHHHhhhhhhcCCeEEEEcCccccccCC-----------CCcc
Q 044010          128 HLVNNAGISSVALFEDIVNITDFKQIMNINFWGSVYTTRFAVPHLRYTKGKIVVLSSAASWLTAP-----------RMSF  196 (248)
Q Consensus       128 ~vv~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~g~iV~isS~~~~~~~~-----------~~~~  196 (248)
                      ++||+||....       +.+++++.+++|+.++.++++++.+.   .. ++|++||...+...+           +...
T Consensus        71 ~vi~~a~~~~~-------~~~~~~~~~~~n~~~~~~l~~a~~~~---~~-~~v~~SS~~v~g~~~~~~~~E~~~~~p~~~  139 (310)
T 1eq2_A           71 AIFHEGACSST-------TEWDGKYMMDNNYQYSKELLHYCLER---EI-PFLYASSAATYGGRTSDFIESREYEKPLNV  139 (310)
T ss_dssp             EEEECCSCCCT-------TCCCHHHHHHHTHHHHHHHHHHHHHH---TC-CEEEEEEGGGGTTCCSCBCSSGGGCCCSSH
T ss_pred             EEEECcccccC-------cccCHHHHHHHHHHHHHHHHHHHHHc---CC-eEEEEeeHHHhCCCCCCCCCCCCCCCCCCh
Confidence            99999997543       12446788999999999999988643   34 899999987653322           2457


Q ss_pred             chHHHHHHHHHHHHHHHHhCCCeEEEEEecCccccCcc
Q 044010          197 YNASKAALVLFFETLRVELGSDVGVTIVTPGFIESELT  234 (248)
Q Consensus       197 Y~~sKaal~~l~~~la~~~~~~i~v~~v~pg~v~T~~~  234 (248)
                      |+.+|.+.+.+++.++.++  +++++.+.||.+.++..
T Consensus       140 Y~~sK~~~e~~~~~~~~~~--g~~~~~lrp~~v~G~~~  175 (310)
T 1eq2_A          140 YGYSKFLFDEYVRQILPEA--NSQIVGFRYFNVYGPRE  175 (310)
T ss_dssp             HHHHHHHHHHHHHHHGGGC--SSCEEEEEECEEESSSC
T ss_pred             hHHHHHHHHHHHHHHHHHc--CCCEEEEeCCcEECcCC
Confidence            9999999999999998775  58999999999988754

>3sc6_A DTDP-4-dehydrorhamnose reductase; RFBD, structural genomics, infectious diseases, bacillus anthracis STR. AMES, rhamnose biosynthetic pathway; HET: NAP; 2.65A {Bacillus anthracis} SCOP: c.2.1.0

Probab=99.73  E-value=1.2e-17  Score=141.27  Aligned_cols=143  Identities=21%  Similarity=0.244  Sum_probs=115.9

Q ss_pred             EEEEcCCCChHHHHHHHHHHHcCCeEEEEeCCcchHHHHHHHHHhhCCCcEEEEEccCCCHHHHHHHHHHHHhHcCCccE
Q 044010           49 VVIITGASSGIGEHLAYEYARRGACLALCARREKSLEEVADTAREIGSPDVITIRADVSKVDDCRSLVEETMNHFGRLDH  128 (248)
Q Consensus        49 ~~lVtGg~~gIG~aia~~l~~~G~~V~l~~r~~~~~~~~~~~l~~~~~~~v~~~~~D~~~~~~~~~~~~~~~~~~g~id~  128 (248)
                      ++|||||+|+||.+++++|+++|++|++++|.                      .+|++|.+++.+++++.     ++|+
T Consensus         7 ~ilVtGatG~iG~~l~~~L~~~g~~V~~~~r~----------------------~~D~~d~~~~~~~~~~~-----~~d~   59 (287)
T 3sc6_A            7 RVIITGANGQLGKQLQEELNPEEYDIYPFDKK----------------------LLDITNISQVQQVVQEI-----RPHI   59 (287)
T ss_dssp             EEEEESTTSHHHHHHHHHSCTTTEEEEEECTT----------------------TSCTTCHHHHHHHHHHH-----CCSE
T ss_pred             EEEEECCCCHHHHHHHHHHHhCCCEEEEeccc----------------------ccCCCCHHHHHHHHHhc-----CCCE
Confidence            89999999999999999999999999999992                      27999999999988865     7999


Q ss_pred             EEEccccCCcccccccCChHHHHHHHHhhhHHHHHHHHHHhhhhhhcCCeEEEEcCccccccC-----------CCCccc
Q 044010          129 LVNNAGISSVALFEDIVNITDFKQIMNINFWGSVYTTRFAVPHLRYTKGKIVVLSSAASWLTA-----------PRMSFY  197 (248)
Q Consensus       129 vv~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~g~iV~isS~~~~~~~-----------~~~~~Y  197 (248)
                      +||+||......     ..+++++.+++|+.++.++++.+.+    .+.++|++||...+.+.           .+...|
T Consensus        60 vi~~a~~~~~~~-----~~~~~~~~~~~n~~~~~~l~~~~~~----~~~~~v~~SS~~vy~~~~~~~~~E~~~~~p~~~Y  130 (287)
T 3sc6_A           60 IIHCAAYTKVDQ-----AEKERDLAYVINAIGARNVAVASQL----VGAKLVYISTDYVFQGDRPEGYDEFHNPAPINIY  130 (287)
T ss_dssp             EEECCCCCCHHH-----HTTCHHHHHHHHTHHHHHHHHHHHH----HTCEEEEEEEGGGSCCCCSSCBCTTSCCCCCSHH
T ss_pred             EEECCcccChHH-----HhcCHHHHHHHHHHHHHHHHHHHHH----cCCeEEEEchhhhcCCCCCCCCCCCCCCCCCCHH
Confidence            999999865331     2256788999999999999998753    34589999998765332           234689


Q ss_pred             hHHHHHHHHHHHHHHHHhCCCeEEEEEecCccccCc
Q 044010          198 NASKAALVLFFETLRVELGSDVGVTIVTPGFIESEL  233 (248)
Q Consensus       198 ~~sKaal~~l~~~la~~~~~~i~v~~v~pg~v~T~~  233 (248)
                      +.+|.+.+.+++.++.      ++..+.||.+..+.
T Consensus       131 ~~sK~~~E~~~~~~~~------~~~ilR~~~v~G~~  160 (287)
T 3sc6_A          131 GASKYAGEQFVKELHN------KYFIVRTSWLYGKY  160 (287)
T ss_dssp             HHHHHHHHHHHHHHCS------SEEEEEECSEECSS
T ss_pred             HHHHHHHHHHHHHhCC------CcEEEeeeeecCCC
Confidence            9999999999887754      34677888876654

>1n2s_A DTDP-4-, DTDP-glucose oxidoreductase; rossman-fold, sugar-nucleotide-binding domain; HET: NAD; 2.00A {Salmonella enterica subsp} SCOP: c.2.1.2 PDB: 1kc1_A* 1kc3_A* 1kbz_A*

Probab=99.73  E-value=1.6e-17  Score=141.14  Aligned_cols=147  Identities=16%  Similarity=0.093  Sum_probs=117.8

Q ss_pred             EEEEcCCCChHHHHHHHHHHHcCCeEEEEeCCcchHHHHHHHHHhhCCCcEEEEEccCCCHHHHHHHHHHHHhHcCCccE
Q 044010           49 VVIITGASSGIGEHLAYEYARRGACLALCARREKSLEEVADTAREIGSPDVITIRADVSKVDDCRSLVEETMNHFGRLDH  128 (248)
Q Consensus        49 ~~lVtGg~~gIG~aia~~l~~~G~~V~l~~r~~~~~~~~~~~l~~~~~~~v~~~~~D~~~~~~~~~~~~~~~~~~g~id~  128 (248)
                      ++|||||+|+||.+++++|+ +|++|++++|+..                  .+.+|++|.+++.++++..     ++|+
T Consensus         2 ~ilVtGatG~iG~~l~~~L~-~g~~V~~~~r~~~------------------~~~~D~~d~~~~~~~~~~~-----~~d~   57 (299)
T 1n2s_A            2 NILLFGKTGQVGWELQRSLA-PVGNLIALDVHSK------------------EFCGDFSNPKGVAETVRKL-----RPDV   57 (299)
T ss_dssp             EEEEECTTSHHHHHHHHHTT-TTSEEEEECTTCS------------------SSCCCTTCHHHHHHHHHHH-----CCSE
T ss_pred             eEEEECCCCHHHHHHHHHhh-cCCeEEEeccccc------------------cccccCCCHHHHHHHHHhc-----CCCE
Confidence            69999999999999999999 8999999999762                  2568999999998888754     6999


Q ss_pred             EEEccccCCcccccccCChHHHHHHHHhhhHHHHHHHHHHhhhhhhcCCeEEEEcCccccccCC-----------CCccc
Q 044010          129 LVNNAGISSVALFEDIVNITDFKQIMNINFWGSVYTTRFAVPHLRYTKGKIVVLSSAASWLTAP-----------RMSFY  197 (248)
Q Consensus       129 vv~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~g~iV~isS~~~~~~~~-----------~~~~Y  197 (248)
                      +||+||......     +.+++++.+++|+.++.++++++.+    .+.++|++||...+.+.+           +...|
T Consensus        58 vih~a~~~~~~~-----~~~~~~~~~~~n~~~~~~l~~a~~~----~~~~~v~~SS~~vy~~~~~~~~~E~~~~~p~~~Y  128 (299)
T 1n2s_A           58 IVNAAAHTAVDK-----AESEPELAQLLNATSVEAIAKAANE----TGAWVVHYSTDYVFPGTGDIPWQETDATSPLNVY  128 (299)
T ss_dssp             EEECCCCCCHHH-----HTTCHHHHHHHHTHHHHHHHHHHTT----TTCEEEEEEEGGGSCCCTTCCBCTTSCCCCSSHH
T ss_pred             EEECcccCCHhh-----hhcCHHHHHHHHHHHHHHHHHHHHH----cCCcEEEEecccEEeCCCCCCCCCCCCCCCccHH
Confidence            999999754321     1245678899999999999998753    234899999987654322           24689


Q ss_pred             hHHHHHHHHHHHHHHHHhCCCeEEEEEecCccccCcc
Q 044010          198 NASKAALVLFFETLRVELGSDVGVTIVTPGFIESELT  234 (248)
Q Consensus       198 ~~sKaal~~l~~~la~~~~~~i~v~~v~pg~v~T~~~  234 (248)
                      +.+|.+.+.+++.++.      +++.+.||.+.++..
T Consensus       129 ~~sK~~~E~~~~~~~~------~~~ilRp~~v~G~~~  159 (299)
T 1n2s_A          129 GKTKLAGEKALQDNCP------KHLIFRTSWVYAGKG  159 (299)
T ss_dssp             HHHHHHHHHHHHHHCS------SEEEEEECSEECSSS
T ss_pred             HHHHHHHHHHHHHhCC------CeEEEeeeeecCCCc
Confidence            9999999999887643      678899999987654

>4b8w_A GDP-L-fucose synthase; oxidoreductase; HET: NAP GDP; 2.75A {Homo sapiens}

Probab=99.72  E-value=1.5e-16  Score=135.45  Aligned_cols=159  Identities=16%  Similarity=0.077  Sum_probs=119.8

Q ss_pred             CCCCCEEEEcCCCChHHHHHHHHHHHcCCeEEEEeCCcchHHHHHHHHHhhCCCcEEEEEccCCCHHHHHHHHHHHHhHc
Q 044010           44 DVSGKVVIITGASSGIGEHLAYEYARRGACLALCARREKSLEEVADTAREIGSPDVITIRADVSKVDDCRSLVEETMNHF  123 (248)
Q Consensus        44 ~~~~k~~lVtGg~~gIG~aia~~l~~~G~~V~l~~r~~~~~~~~~~~l~~~~~~~v~~~~~D~~~~~~~~~~~~~~~~~~  123 (248)
                      .++++++|||||+|+||.+++++|+++|+      +...            ....+..+.+|++|.+++.++++..    
T Consensus         3 ~~~~~~vlVtGatG~iG~~l~~~L~~~g~------~~~~------------~~~~~~~~~~D~~d~~~~~~~~~~~----   60 (319)
T 4b8w_A            3 YFQSMRILVTGGSGLVGKAIQKVVADGAG------LPGE------------DWVFVSSKDADLTDTAQTRALFEKV----   60 (319)
T ss_dssp             CCCCCEEEEETCSSHHHHHHHHHHHTTTC------CTTC------------EEEECCTTTCCTTSHHHHHHHHHHS----
T ss_pred             cccCCeEEEECCCcHHHHHHHHHHHhcCC------cccc------------cccccCceecccCCHHHHHHHHhhc----
Confidence            46789999999999999999999999997      1110            0012334578999999999888753    


Q ss_pred             CCccEEEEccccCCcccccccCChHHHHHHHHhhhHHHHHHHHHHhhhhhhcCCeEEEEcCccccccC------------
Q 044010          124 GRLDHLVNNAGISSVALFEDIVNITDFKQIMNINFWGSVYTTRFAVPHLRYTKGKIVVLSSAASWLTA------------  191 (248)
Q Consensus       124 g~id~vv~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~g~iV~isS~~~~~~~------------  191 (248)
                       ++|+|||+||.......    +.++..+.+++|+.++.++++.+...   ...++|++||...+...            
T Consensus        61 -~~d~Vih~A~~~~~~~~----~~~~~~~~~~~nv~gt~~ll~a~~~~---~~~~~v~~SS~~vyg~~~~~~~~E~~~~~  132 (319)
T 4b8w_A           61 -QPTHVIHLAAMVGGLFR----NIKYNLDFWRKNVHMNDNVLHSAFEV---GARKVVSCLSTCIFPDKTTYPIDETMIHN  132 (319)
T ss_dssp             -CCSEEEECCCCCCCHHH----HTTCHHHHHHHHHHHHHHHHHHHHHT---TCSEEEEECCGGGSCSSCCSSBCGGGGGB
T ss_pred             -CCCEEEECceecccccc----cccCHHHHHHHHHHHHHHHHHHHHHc---CCCeEEEEcchhhcCCCCCCCcccccccc
Confidence             69999999998532111    22456678999999999999987533   23589999998765321            


Q ss_pred             ----CCCccchHHHHHHHHHHHHHHHHhCCCeEEEEEecCccccCcc
Q 044010          192 ----PRMSFYNASKAALVLFFETLRVELGSDVGVTIVTPGFIESELT  234 (248)
Q Consensus       192 ----~~~~~Y~~sKaal~~l~~~la~~~~~~i~v~~v~pg~v~T~~~  234 (248)
                          |...+|+.+|.+.+.+++.++.+.  ++++..+.||.+..+-.
T Consensus       133 ~~~~p~~~~Y~~sK~~~E~~~~~~~~~~--~~~~~ilRp~~v~Gp~~  177 (319)
T 4b8w_A          133 GPPHNSNFGYSYAKRMIDVQNRAYFQQY--GCTFTAVIPTNVFGPHD  177 (319)
T ss_dssp             SCCCSSSHHHHHHHHHHHHHHHHHHHHH--CCEEEEEEECEEECTTC
T ss_pred             CCCCCCcchHHHHHHHHHHHHHHHHHhh--CCCEEEEeeccccCCCC
Confidence                111259999999999999999887  48899999998877654

>2jl1_A Triphenylmethane reductase; oxidoreductase, bioremediation; HET: NAP GOL; 1.96A {Citrobacter SP} PDB: 2vrb_A* 2vrc_A 2vrc_D

Probab=99.70  E-value=2.3e-16  Score=133.16  Aligned_cols=145  Identities=11%  Similarity=0.086  Sum_probs=113.8

Q ss_pred             CEEEEcCCCChHHHHHHHHHHHc--CCeEEEEeCCcchHHHHHHHHHhhCCCcEEEEEccCCCHHHHHHHHHHHHhHcCC
Q 044010           48 KVVIITGASSGIGEHLAYEYARR--GACLALCARREKSLEEVADTAREIGSPDVITIRADVSKVDDCRSLVEETMNHFGR  125 (248)
Q Consensus        48 k~~lVtGg~~gIG~aia~~l~~~--G~~V~l~~r~~~~~~~~~~~l~~~~~~~v~~~~~D~~~~~~~~~~~~~~~~~~g~  125 (248)
                      |+++||||+|+||.+++++|+++  |++|++++|+.++.+...    .   ..+.++.+|++|.+++.++++       +
T Consensus         1 ~~ilVtGatG~iG~~l~~~L~~~~~g~~V~~~~r~~~~~~~l~----~---~~~~~~~~D~~d~~~l~~~~~-------~   66 (287)
T 2jl1_A            1 FSIAVTGATGQLGGLVIQHLLKKVPASQIIAIVRNVEKASTLA----D---QGVEVRHGDYNQPESLQKAFA-------G   66 (287)
T ss_dssp             CCEEETTTTSHHHHHHHHHHTTTSCGGGEEEEESCTTTTHHHH----H---TTCEEEECCTTCHHHHHHHTT-------T
T ss_pred             CeEEEEcCCchHHHHHHHHHHHhCCCCeEEEEEcCHHHHhHHh----h---cCCeEEEeccCCHHHHHHHHh-------c
Confidence            46999999999999999999999  999999999877654332    1   257789999999988887765       5


Q ss_pred             ccEEEEccccCCcccccccCChHHHHHHHHhhhHHHHHHHHHHhhhhhhcCCeEEEEcCccccccCCCCccchHHHHHHH
Q 044010          126 LDHLVNNAGISSVALFEDIVNITDFKQIMNINFWGSVYTTRFAVPHLRYTKGKIVVLSSAASWLTAPRMSFYNASKAALV  205 (248)
Q Consensus       126 id~vv~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~g~iV~isS~~~~~~~~~~~~Y~~sKaal~  205 (248)
                      +|++||+||...        . +      ++|+.++.++++++...   ..+++|++||..+..   ....|+.+|.+.+
T Consensus        67 ~d~vi~~a~~~~--------~-~------~~n~~~~~~l~~a~~~~---~~~~~v~~Ss~~~~~---~~~~y~~~K~~~E  125 (287)
T 2jl1_A           67 VSKLLFISGPHY--------D-N------TLLIVQHANVVKAARDA---GVKHIAYTGYAFAEE---SIIPLAHVHLATE  125 (287)
T ss_dssp             CSEEEECCCCCS--------C-H------HHHHHHHHHHHHHHHHT---TCSEEEEEEETTGGG---CCSTHHHHHHHHH
T ss_pred             CCEEEEcCCCCc--------C-c------hHHHHHHHHHHHHHHHc---CCCEEEEECCCCCCC---CCCchHHHHHHHH
Confidence            899999998521        1 1      46888888888876432   236999999987642   2348999999999


Q ss_pred             HHHHHHHHHhCCCeEEEEEecCccccCc
Q 044010          206 LFFETLRVELGSDVGVTIVTPGFIESEL  233 (248)
Q Consensus       206 ~l~~~la~~~~~~i~v~~v~pg~v~T~~  233 (248)
                      .+.+.      .+++++.+.||.+.++.
T Consensus       126 ~~~~~------~~~~~~ilrp~~~~~~~  147 (287)
T 2jl1_A          126 YAIRT------TNIPYTFLRNALYTDFF  147 (287)
T ss_dssp             HHHHH------TTCCEEEEEECCBHHHH
T ss_pred             HHHHH------cCCCeEEEECCEecccc
Confidence            98753      35889999999987765

>3gpi_A NAD-dependent epimerase/dehydratase; structural genomics, unknown function, PSI-2, protein structure initiative; 1.44A {Methylobacillus flagellatus KT}

Probab=99.69  E-value=3.2e-17  Score=138.63  Aligned_cols=152  Identities=18%  Similarity=0.092  Sum_probs=115.7

Q ss_pred             CCCCEEEEcCCCChHHHHHHHHHHHcCCeEEEEeCCcchHHHHHHHHHhhCCCcEEEEEccCCCHHHHHHHHHHHHhHcC
Q 044010           45 VSGKVVIITGASSGIGEHLAYEYARRGACLALCARREKSLEEVADTAREIGSPDVITIRADVSKVDDCRSLVEETMNHFG  124 (248)
Q Consensus        45 ~~~k~~lVtGg~~gIG~aia~~l~~~G~~V~l~~r~~~~~~~~~~~l~~~~~~~v~~~~~D~~~~~~~~~~~~~~~~~~g  124 (248)
                      |+++++|||| +|+||.+++++|+++|++|++++|+.++.           ..++.++.+|++|.+++.++++      +
T Consensus         1 M~~~~ilVtG-aG~iG~~l~~~L~~~g~~V~~~~r~~~~~-----------~~~~~~~~~Dl~d~~~~~~~~~------~   62 (286)
T 3gpi_A            1 MSLSKILIAG-CGDLGLELARRLTAQGHEVTGLRRSAQPM-----------PAGVQTLIADVTRPDTLASIVH------L   62 (286)
T ss_dssp             -CCCCEEEEC-CSHHHHHHHHHHHHTTCCEEEEECTTSCC-----------CTTCCEEECCTTCGGGCTTGGG------G
T ss_pred             CCCCcEEEEC-CCHHHHHHHHHHHHCCCEEEEEeCCcccc-----------ccCCceEEccCCChHHHHHhhc------C
Confidence            4567899999 59999999999999999999999987652           1367889999999998887765      3


Q ss_pred             CccEEEEccccCCcccccccCChHHHHHHHHhhhHHHHHHHHHHhhhhhhcCCeEEEEcCccccccCC-----------C
Q 044010          125 RLDHLVNNAGISSVALFEDIVNITDFKQIMNINFWGSVYTTRFAVPHLRYTKGKIVVLSSAASWLTAP-----------R  193 (248)
Q Consensus       125 ~id~vv~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~g~iV~isS~~~~~~~~-----------~  193 (248)
                      ++|+|||+||...          ++.+..+++|+.++.++++++..   ...+++|++||...+...+           +
T Consensus        63 ~~d~vih~a~~~~----------~~~~~~~~~n~~~~~~ll~a~~~---~~~~~~v~~SS~~vyg~~~~~~~~E~~~~~p  129 (286)
T 3gpi_A           63 RPEILVYCVAASE----------YSDEHYRLSYVEGLRNTLSALEG---APLQHVFFVSSTGVYGQEVEEWLDEDTPPIA  129 (286)
T ss_dssp             CCSEEEECHHHHH----------HC-----CCSHHHHHHHHHHTTT---SCCCEEEEEEEGGGCCCCCSSEECTTSCCCC
T ss_pred             CCCEEEEeCCCCC----------CCHHHHHHHHHHHHHHHHHHHhh---CCCCEEEEEcccEEEcCCCCCCCCCCCCCCC
Confidence            6999999998521          33467788999999999988752   2336999999987654321           3


Q ss_pred             CccchHHHHHHHHHHHHHHHHhCCCeEEEEEecCccccCccc
Q 044010          194 MSFYNASKAALVLFFETLRVELGSDVGVTIVTPGFIESELTQ  235 (248)
Q Consensus       194 ~~~Y~~sKaal~~l~~~la~~~~~~i~v~~v~pg~v~T~~~~  235 (248)
                      ...|+.+|.+.+.+ +..       ++++.+.||.+..+...
T Consensus       130 ~~~Y~~sK~~~E~~-~~~-------~~~~ilR~~~v~G~~~~  163 (286)
T 3gpi_A          130 KDFSGKRMLEAEAL-LAA-------YSSTILRFSGIYGPGRL  163 (286)
T ss_dssp             CSHHHHHHHHHHHH-GGG-------SSEEEEEECEEEBTTBC
T ss_pred             CChhhHHHHHHHHH-Hhc-------CCeEEEecccccCCCch
Confidence            46899999999988 442       67888999988776543

>3vps_A TUNA, NAD-dependent epimerase/dehydratase; tunicamycins, biosynthesis, EXO-glycal, rossman transferase; HET: UD1 NAD; 1.90A {Streptomyces chartreusis}

Probab=99.69  E-value=6e-18  Score=144.81  Aligned_cols=164  Identities=18%  Similarity=0.081  Sum_probs=114.7

Q ss_pred             CCCCCEEEEcCCCChHHHHHHHHHHHcCCeEEEEeCCcchHHHHHHHHHhh-CCCcEEEEEccCCCHHHHHHHHHHHHhH
Q 044010           44 DVSGKVVIITGASSGIGEHLAYEYARRGACLALCARREKSLEEVADTAREI-GSPDVITIRADVSKVDDCRSLVEETMNH  122 (248)
Q Consensus        44 ~~~~k~~lVtGg~~gIG~aia~~l~~~G~~V~l~~r~~~~~~~~~~~l~~~-~~~~v~~~~~D~~~~~~~~~~~~~~~~~  122 (248)
                      +++++++|||||+|+||.+++++|+++|++|++++|+........+.+... ...++.++.+|++               
T Consensus         4 ~~~~~~vlVtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~---------------   68 (321)
T 3vps_A            4 NTLKHRILITGGAGFIGGHLARALVASGEEVTVLDDLRVPPMIPPEGTGKFLEKPVLELEERDLS---------------   68 (321)
T ss_dssp             ---CCEEEEETTTSHHHHHHHHHHHHTTCCEEEECCCSSCCSSCCTTSSEEECSCGGGCCHHHHT---------------
T ss_pred             ccCCCeEEEECCCChHHHHHHHHHHHCCCEEEEEecCCcccccchhhhhhhccCCCeeEEeCccc---------------
Confidence            466899999999999999999999999999999999765210000011110 1113344555554               


Q ss_pred             cCCccEEEEccccCCcccccccCChHHHHHHHHhhhHHHHHHHHHHhhhhhhcCCeEEEEcCccccccC-----------
Q 044010          123 FGRLDHLVNNAGISSVALFEDIVNITDFKQIMNINFWGSVYTTRFAVPHLRYTKGKIVVLSSAASWLTA-----------  191 (248)
Q Consensus       123 ~g~id~vv~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~g~iV~isS~~~~~~~-----------  191 (248)
                        ++|++||+||.........     +....++ |+.++.++++++...   ..+++|++||...+...           
T Consensus        69 --~~d~vi~~a~~~~~~~~~~-----~~~~~~~-n~~~~~~ll~a~~~~---~v~~~v~~SS~~v~~~~~~~~~~E~~~~  137 (321)
T 3vps_A           69 --DVRLVYHLASHKSVPRSFK-----QPLDYLD-NVDSGRHLLALCTSV---GVPKVVVGSTCEVYGQADTLPTPEDSPL  137 (321)
T ss_dssp             --TEEEEEECCCCCCHHHHTT-----STTTTHH-HHHHHHHHHHHHHHH---TCCEEEEEEEGGGGCSCSSSSBCTTSCC
T ss_pred             --cCCEEEECCccCChHHHHh-----CHHHHHH-HHHHHHHHHHHHHHc---CCCeEEEecCHHHhCCCCCCCCCCCCCC
Confidence              7999999999765432221     1223455 999999998887543   23699999998765432           


Q ss_pred             CCCccchHHHHHHHHHHHHHHHHhCCCe-EEEEEecCccccCccc
Q 044010          192 PRMSFYNASKAALVLFFETLRVELGSDV-GVTIVTPGFIESELTQ  235 (248)
Q Consensus       192 ~~~~~Y~~sKaal~~l~~~la~~~~~~i-~v~~v~pg~v~T~~~~  235 (248)
                      .+...|+.+|.+.+.+++.++.++  ++ ++..+.||.+..+...
T Consensus       138 ~p~~~Y~~sK~~~E~~~~~~~~~~--~~~~~~ilRp~~v~G~~~~  180 (321)
T 3vps_A          138 SPRSPYAASKVGLEMVAGAHQRAS--VAPEVGIVRFFNVYGPGER  180 (321)
T ss_dssp             CCCSHHHHHHHHHHHHHHHHHHSS--SSCEEEEEEECEEECTTCC
T ss_pred             CCCChhHHHHHHHHHHHHHHHHHc--CCCceEEEEeccccCcCCC
Confidence            124689999999999999999875  47 9999999998876543

>4f6l_B AUSA reductase domain protein; thioester reductase, oxidoreductase; 3.86A {Staphylococcus aureus}

Probab=99.69  E-value=1.8e-16  Score=144.71  Aligned_cols=168  Identities=16%  Similarity=0.138  Sum_probs=126.3

Q ss_pred             CCEEEEcCCCChHHHHHHHHHHHcCCeEEEEeCCcchH---HHHHHHHHhh--------CCCcEEEEEccCCCHHHHHHH
Q 044010           47 GKVVIITGASSGIGEHLAYEYARRGACLALCARREKSL---EEVADTAREI--------GSPDVITIRADVSKVDDCRSL  115 (248)
Q Consensus        47 ~k~~lVtGg~~gIG~aia~~l~~~G~~V~l~~r~~~~~---~~~~~~l~~~--------~~~~v~~~~~D~~~~~~~~~~  115 (248)
                      .+++|||||+|+||.+++++|.++|++|++++|+..+.   +...+.++..        ...++.++.+|+++.+++.  
T Consensus       150 ~~~VLVTGatG~iG~~l~~~L~~~g~~V~~l~R~~~~~~~~~~l~~~l~~~~~~~~~~~~~~~v~~v~~Dl~d~~~l~--  227 (508)
T 4f6l_B          150 LGNTLLTGATGFLGAYLIEALQGYSHRIYCFIRADNEEIAWYKLMTNLNDYFSEETVEMMLSNIEVIVGDFECMDDVV--  227 (508)
T ss_dssp             CEEEEESCTTSHHHHHHHHHTBTTEEEEEEEEESSSHHHHHHHHHHHHHHHSCHHHHHHHSTTEEEEEEBTTBCSSCC--
T ss_pred             CCeEEEECCccchHHHHHHHHHhcCCEEEEEECCCChHHHHHHHHHHHHHhcccccchhccCceEEEecCCcccccCC--
Confidence            47999999999999999999998999999999988732   2333333221        2348999999999988776  


Q ss_pred             HHHHHhHcCCccEEEEccccCCcccccccCChHHHHHHHHhhhHHHHHHHHHHhhhhhhcCCeEEEEcCccc--ccc---
Q 044010          116 VEETMNHFGRLDHLVNNAGISSVALFEDIVNITDFKQIMNINFWGSVYTTRFAVPHLRYTKGKIVVLSSAAS--WLT---  190 (248)
Q Consensus       116 ~~~~~~~~g~id~vv~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~g~iV~isS~~~--~~~---  190 (248)
                            ...++|+|||+||....        ..+++..+.+|+.++.++++.+.+    ...++|++||...  ...   
T Consensus       228 ------~~~~~D~Vih~Aa~~~~--------~~~~~~~~~~Nv~gt~~ll~~a~~----~~~~~v~iSS~~vG~~~~~~~  289 (508)
T 4f6l_B          228 ------LPENMDTIIHAGARTDH--------FGDDDEFEKVNVQGTVDVIRLAQQ----HHARLIYVSTISVGTYFDIDT  289 (508)
T ss_dssp             ------CSSCCSEEEECCCC----------------CCHHHHHHHHHHHHHHHHT----TTCEEEEEEESCTTSEECTTC
T ss_pred             ------CccCCCEEEECCceecC--------CCCHHHHhhhHHHHHHHHHHHHHh----CCCcEEEeCChhhccCCccCC
Confidence                  34589999999997531        244567788899999999998865    3468999999776  100   


Q ss_pred             -------------CCCCccchHHHHHHHHHHHHHHHHhCCCeEEEEEecCccccCccccc
Q 044010          191 -------------APRMSFYNASKAALVLFFETLRVELGSDVGVTIVTPGFIESELTQGK  237 (248)
Q Consensus       191 -------------~~~~~~Y~~sKaal~~l~~~la~~~~~~i~v~~v~pg~v~T~~~~~~  237 (248)
                                   ......|+.+|.+.+.+++.++.   .+++++.+.||.|..+.....
T Consensus       290 ~~~~~~E~~~~~~~~~~~~Y~~sK~~~E~~~~~~~~---~gi~~~ilRp~~v~G~~~~~~  346 (508)
T 4f6l_B          290 EDVTFSEADVYKGQLLTSPYTRSKFYSELKVLEAVN---NGLDGRIVRVGNLTSPYNGRW  346 (508)
T ss_dssp             SCCEECTTCSCSSBCCCSHHHHHHHHHHHHHHHHHH---TTCEEEEEEECCEESCSSSCC
T ss_pred             cCcccccccccccccCCCcHHHHHHHHHHHHHHHHH---cCCCEEEEecceeccCCCCCc
Confidence                         11456899999999999998754   369999999999987765443

>1xgk_A Nitrogen metabolite repression regulator NMRA; rossmann fold, transcriptional regulation, short chain dehyd reductase, NADP binding; 1.40A {Emericella nidulans} SCOP: c.2.1.2 PDB: 1k6x_A* 1k6j_A 1k6i_A* 1ti7_A* 2vus_A 2vut_A* 2vuu_A*

Probab=99.69  E-value=1.1e-15  Score=133.47  Aligned_cols=153  Identities=18%  Similarity=0.106  Sum_probs=112.2

Q ss_pred             CCCCEEEEcCCCChHHHHHHHHHHHcCCeEEEEeCCcchHHHHHHHHHhhCCCcEEEEEcc-CCCHHHHHHHHHHHHhHc
Q 044010           45 VSGKVVIITGASSGIGEHLAYEYARRGACLALCARREKSLEEVADTAREIGSPDVITIRAD-VSKVDDCRSLVEETMNHF  123 (248)
Q Consensus        45 ~~~k~~lVtGg~~gIG~aia~~l~~~G~~V~l~~r~~~~~~~~~~~l~~~~~~~v~~~~~D-~~~~~~~~~~~~~~~~~~  123 (248)
                      +++|+++||||+|+||.+++++|+++|++|++++|+.++..  .+.+...  .++.++.+| ++|.+++.++++      
T Consensus         3 ~~~~~ilVtGatG~iG~~l~~~L~~~g~~V~~~~R~~~~~~--~~~l~~~--~~v~~v~~D~l~d~~~l~~~~~------   72 (352)
T 1xgk_A            3 QQKKTIAVVGATGRQGASLIRVAAAVGHHVRAQVHSLKGLI--AEELQAI--PNVTLFQGPLLNNVPLMDTLFE------   72 (352)
T ss_dssp             CCCCCEEEESTTSHHHHHHHHHHHHTTCCEEEEESCSCSHH--HHHHHTS--TTEEEEESCCTTCHHHHHHHHT------
T ss_pred             CCCCEEEEECCCCHHHHHHHHHHHhCCCEEEEEECCCChhh--HHHHhhc--CCcEEEECCccCCHHHHHHHHh------
Confidence            45789999999999999999999999999999999887642  1233322  268889999 999999888764      


Q ss_pred             CCccEEEEccccCCcccccccCChHHHHHHHHhhhHHHHHHHHHHhhhhhhc-CCeEEEEcCcc-ccccCCCCccchHHH
Q 044010          124 GRLDHLVNNAGISSVALFEDIVNITDFKQIMNINFWGSVYTTRFAVPHLRYT-KGKIVVLSSAA-SWLTAPRMSFYNASK  201 (248)
Q Consensus       124 g~id~vv~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~-~g~iV~isS~~-~~~~~~~~~~Y~~sK  201 (248)
                       ++|++|||++....                ..|..+ .++++++..   .. .+++|++||.. ...+.+....|+.+|
T Consensus        73 -~~d~Vi~~a~~~~~----------------~~~~~~-~~l~~aa~~---~g~v~~~V~~SS~~~~~~~~~~~~~y~~sK  131 (352)
T 1xgk_A           73 -GAHLAFINTTSQAG----------------DEIAIG-KDLADAAKR---AGTIQHYIYSSMPDHSLYGPWPAVPMWAPK  131 (352)
T ss_dssp             -TCSEEEECCCSTTS----------------CHHHHH-HHHHHHHHH---HSCCSEEEEEECCCGGGTSSCCCCTTTHHH
T ss_pred             -cCCEEEEcCCCCCc----------------HHHHHH-HHHHHHHHH---cCCccEEEEeCCccccccCCCCCccHHHHH
Confidence             58999999875320                113333 444444321   22 36999999986 344434557899999


Q ss_pred             HHHHHHHHHHHHHhCCCeEEEEEecCccccCcc
Q 044010          202 AALVLFFETLRVELGSDVGVTIVTPGFIESELT  234 (248)
Q Consensus       202 aal~~l~~~la~~~~~~i~v~~v~pg~v~T~~~  234 (248)
                      .+.+.+++.+      +++++.+.||++.++..
T Consensus       132 ~~~E~~~~~~------gi~~~ivrpg~~g~~~~  158 (352)
T 1xgk_A          132 FTVENYVRQL------GLPSTFVYAGIYNNNFT  158 (352)
T ss_dssp             HHHHHHHHTS------SSCEEEEEECEEGGGCB
T ss_pred             HHHHHHHHHc------CCCEEEEecceecCCch
Confidence            9999988752      58889999998765543

>2wm3_A NMRA-like family domain containing protein 1; unknown function; HET: NAP NFL; 1.85A {Homo sapiens} PDB: 2wmd_A* 2exx_A* 3dxf_A 3e5m_A

Probab=99.66  E-value=2.3e-15  Score=127.95  Aligned_cols=154  Identities=11%  Similarity=0.024  Sum_probs=110.4

Q ss_pred             CCEEEEcCCCChHHHHHHHHHHHcC-CeEEEEeCCcchHHHHHHHHHhhCCCcEEEEEccCCCHHHHHHHHHHHHhHcCC
Q 044010           47 GKVVIITGASSGIGEHLAYEYARRG-ACLALCARREKSLEEVADTAREIGSPDVITIRADVSKVDDCRSLVEETMNHFGR  125 (248)
Q Consensus        47 ~k~~lVtGg~~gIG~aia~~l~~~G-~~V~l~~r~~~~~~~~~~~l~~~~~~~v~~~~~D~~~~~~~~~~~~~~~~~~g~  125 (248)
                      +|+++||||+|+||.+++++|+++| ++|++++|+.++.+.  +.+..   ..+.++.+|++|.+++.++++       +
T Consensus         5 ~~~ilVtGatG~iG~~l~~~L~~~g~~~V~~~~R~~~~~~~--~~l~~---~~~~~~~~D~~d~~~l~~~~~-------~   72 (299)
T 2wm3_A            5 KKLVVVFGGTGAQGGSVARTLLEDGTFKVRVVTRNPRKKAA--KELRL---QGAEVVQGDQDDQVIMELALN-------G   72 (299)
T ss_dssp             CCEEEEETTTSHHHHHHHHHHHHHCSSEEEEEESCTTSHHH--HHHHH---TTCEEEECCTTCHHHHHHHHT-------T
T ss_pred             CCEEEEECCCchHHHHHHHHHHhcCCceEEEEEcCCCCHHH--HHHHH---CCCEEEEecCCCHHHHHHHHh-------c
Confidence            5799999999999999999999999 999999998765432  22322   257889999999999887765       5


Q ss_pred             ccEEEEccccCCcccccccCChHHHHHHHHhhhHHHHHHHHHHhhhhhhc-CCeEEEEcCcccccc--CCCCccchHHHH
Q 044010          126 LDHLVNNAGISSVALFEDIVNITDFKQIMNINFWGSVYTTRFAVPHLRYT-KGKIVVLSSAASWLT--APRMSFYNASKA  202 (248)
Q Consensus       126 id~vv~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~-~g~iV~isS~~~~~~--~~~~~~Y~~sKa  202 (248)
                      +|++||++|.....      .       .+.|+.+...++++    +++. .+++|+.|+......  .+....|..+|.
T Consensus        73 ~d~vi~~a~~~~~~------~-------~~~~~~~~~~~~~a----a~~~gv~~iv~~S~~~~~~~~~~~~~~~y~~sK~  135 (299)
T 2wm3_A           73 AYATFIVTNYWESC------S-------QEQEVKQGKLLADL----ARRLGLHYVVYSGLENIKKLTAGRLAAAHFDGKG  135 (299)
T ss_dssp             CSEEEECCCHHHHT------C-------HHHHHHHHHHHHHH----HHHHTCSEEEECCCCCHHHHTTTSCCCHHHHHHH
T ss_pred             CCEEEEeCCCCccc------c-------chHHHHHHHHHHHH----HHHcCCCEEEEEcCccccccCCCcccCchhhHHH
Confidence            99999999853210      1       12344444444444    3333 378999665443221  122467999999


Q ss_pred             HHHHHHHHHHHHhCCCeEEEEEecCccccCccc
Q 044010          203 ALVLFFETLRVELGSDVGVTIVTPGFIESELTQ  235 (248)
Q Consensus       203 al~~l~~~la~~~~~~i~v~~v~pg~v~T~~~~  235 (248)
                      +.+.+.+.    .  +++++.+.||.+.+++..
T Consensus       136 ~~e~~~~~----~--gi~~~ilrp~~~~~~~~~  162 (299)
T 2wm3_A          136 EVEEYFRD----I--GVPMTSVRLPCYFENLLS  162 (299)
T ss_dssp             HHHHHHHH----H--TCCEEEEECCEEGGGGGT
T ss_pred             HHHHHHHH----C--CCCEEEEeecHHhhhchh
Confidence            99998764    2  589999999999887654

>2zcu_A Uncharacterized oxidoreductase YTFG; alpha-beta sandwich; 1.80A {Escherichia coli} PDB: 2zcv_A*

Probab=99.65  E-value=1.1e-15  Score=128.71  Aligned_cols=142  Identities=12%  Similarity=0.063  Sum_probs=105.9

Q ss_pred             EEEEcCCCChHHHHHHHHHHHc--CCeEEEEeCCcchHHHHHHHHHhhCCCcEEEEEccCCCHHHHHHHHHHHHhHcCCc
Q 044010           49 VVIITGASSGIGEHLAYEYARR--GACLALCARREKSLEEVADTAREIGSPDVITIRADVSKVDDCRSLVEETMNHFGRL  126 (248)
Q Consensus        49 ~~lVtGg~~gIG~aia~~l~~~--G~~V~l~~r~~~~~~~~~~~l~~~~~~~v~~~~~D~~~~~~~~~~~~~~~~~~g~i  126 (248)
                      +++||||+|+||.+++++|+++  |++|++++|+.++.+...    .   .++.++.+|++|.+++.++++       ++
T Consensus         1 ~ilVtGatG~iG~~l~~~L~~~~~g~~V~~~~r~~~~~~~~~----~---~~~~~~~~D~~d~~~~~~~~~-------~~   66 (286)
T 2zcu_A            1 MIAITGATGQLGHYVIESLMKTVPASQIVAIVRNPAKAQALA----A---QGITVRQADYGDEAALTSALQ-------GV   66 (286)
T ss_dssp             CEEEESTTSHHHHHHHHHHTTTSCGGGEEEEESCTTTCHHHH----H---TTCEEEECCTTCHHHHHHHTT-------TC
T ss_pred             CEEEEcCCchHHHHHHHHHHhhCCCceEEEEEcChHhhhhhh----c---CCCeEEEcCCCCHHHHHHHHh-------CC
Confidence            4799999999999999999998  999999999877654322    1   257789999999988877764       68


Q ss_pred             cEEEEccccCCcccccccCChHHHHHHHHhhhHHHHHHHHHHhhhhhhcCCeEEEEcCccccccCCCCccchHHHHHHHH
Q 044010          127 DHLVNNAGISSVALFEDIVNITDFKQIMNINFWGSVYTTRFAVPHLRYTKGKIVVLSSAASWLTAPRMSFYNASKAALVL  206 (248)
Q Consensus       127 d~vv~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~g~iV~isS~~~~~~~~~~~~Y~~sKaal~~  206 (248)
                      |++||+||...          +       .|+.++.++++++...   ..+++|++||..+.   +....|+.+|.+.+.
T Consensus        67 d~vi~~a~~~~----------~-------~~~~~~~~l~~a~~~~---~~~~~v~~Ss~~~~---~~~~~y~~sK~~~e~  123 (286)
T 2zcu_A           67 EKLLLISSSEV----------G-------QRAPQHRNVINAAKAA---GVKFIAYTSLLHAD---TSPLGLADEHIETEK  123 (286)
T ss_dssp             SEEEECC-------------------------CHHHHHHHHHHHH---TCCEEEEEEETTTT---TCCSTTHHHHHHHHH
T ss_pred             CEEEEeCCCCc----------h-------HHHHHHHHHHHHHHHc---CCCEEEEECCCCCC---CCcchhHHHHHHHHH
Confidence            99999998521          0       2555666666655321   23699999998765   233589999999999


Q ss_pred             HHHHHHHHhCCCeEEEEEecCccccCc
Q 044010          207 FFETLRVELGSDVGVTIVTPGFIESEL  233 (248)
Q Consensus       207 l~~~la~~~~~~i~v~~v~pg~v~T~~  233 (248)
                      +.+.      .+++++.+.||++.+++
T Consensus       124 ~~~~------~~~~~~ilrp~~~~~~~  144 (286)
T 2zcu_A          124 MLAD------SGIVYTLLRNGWYSENY  144 (286)
T ss_dssp             HHHH------HCSEEEEEEECCBHHHH
T ss_pred             HHHH------cCCCeEEEeChHHhhhh
Confidence            8763      25899999999987764

>3i6i_A Putative leucoanthocyanidin reductase 1; rossmann fold, short chain dehydrogenase reductase, flavonoi oxidoreductase; HET: NDP; 1.75A {Vitis vinifera} PDB: 3i5m_A 3i52_A* 3i6q_A*

Probab=99.61  E-value=1.1e-14  Score=126.32  Aligned_cols=156  Identities=14%  Similarity=0.084  Sum_probs=108.6

Q ss_pred             CCCCCEEEEcCCCChHHHHHHHHHHHcCCeEEEEeCCcchHHHHHHHHHhhCCCcEEEEEccCCCHHHHHHHHHHHHhHc
Q 044010           44 DVSGKVVIITGASSGIGEHLAYEYARRGACLALCARREKSLEEVADTAREIGSPDVITIRADVSKVDDCRSLVEETMNHF  123 (248)
Q Consensus        44 ~~~~k~~lVtGg~~gIG~aia~~l~~~G~~V~l~~r~~~~~~~~~~~l~~~~~~~v~~~~~D~~~~~~~~~~~~~~~~~~  123 (248)
                      .|++++++||||+|+||.+++++|+++|++|.+++|+........+.+.+....++.++.+|++|.+++.+++++.    
T Consensus         7 ~M~~~~IlVtGatG~iG~~l~~~L~~~g~~V~~l~R~~~~~~~~~~~~~~l~~~~v~~~~~Dl~d~~~l~~~~~~~----   82 (346)
T 3i6i_A            7 PSPKGRVLIAGATGFIGQFVATASLDAHRPTYILARPGPRSPSKAKIFKALEDKGAIIVYGLINEQEAMEKILKEH----   82 (346)
T ss_dssp             ----CCEEEECTTSHHHHHHHHHHHHTTCCEEEEECSSCCCHHHHHHHHHHHHTTCEEEECCTTCHHHHHHHHHHT----
T ss_pred             CCCCCeEEEECCCcHHHHHHHHHHHHCCCCEEEEECCCCCChhHHHHHHHHHhCCcEEEEeecCCHHHHHHHHhhC----
Confidence            3667899999999999999999999999999999998722111222222221236889999999999999888753    


Q ss_pred             CCccEEEEccccCCcccccccCChHHHHHHHHhhhHHHHHHHHHHhhhhhhc-CCeEEEEcCccccc----cCCCCccch
Q 044010          124 GRLDHLVNNAGISSVALFEDIVNITDFKQIMNINFWGSVYTTRFAVPHLRYT-KGKIVVLSSAASWL----TAPRMSFYN  198 (248)
Q Consensus       124 g~id~vv~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~-~g~iV~isS~~~~~----~~~~~~~Y~  198 (248)
                       ++|+|||++|..                    |+.+..++++++...   . ..++|+ |+.....    +.++...|+
T Consensus        83 -~~d~Vi~~a~~~--------------------n~~~~~~l~~aa~~~---g~v~~~v~-S~~g~~~~e~~~~~p~~~y~  137 (346)
T 3i6i_A           83 -EIDIVVSTVGGE--------------------SILDQIALVKAMKAV---GTIKRFLP-SEFGHDVNRADPVEPGLNMY  137 (346)
T ss_dssp             -TCCEEEECCCGG--------------------GGGGHHHHHHHHHHH---CCCSEEEC-SCCSSCTTTCCCCTTHHHHH
T ss_pred             -CCCEEEECCchh--------------------hHHHHHHHHHHHHHc---CCceEEee-cccCCCCCccCcCCCcchHH
Confidence             799999999862                    566666677765432   2 246664 4332211    123445799


Q ss_pred             HHHHHHHHHHHHHHHHhCCCeEEEEEecCccccCcc
Q 044010          199 ASKAALVLFFETLRVELGSDVGVTIVTPGFIESELT  234 (248)
Q Consensus       199 ~sKaal~~l~~~la~~~~~~i~v~~v~pg~v~T~~~  234 (248)
                      .+|.+.+.+.+.      .++++..+.||.+.....
T Consensus       138 ~sK~~~e~~l~~------~g~~~tivrpg~~~g~~~  167 (346)
T 3i6i_A          138 REKRRVRQLVEE------SGIPFTYICCNSIASWPY  167 (346)
T ss_dssp             HHHHHHHHHHHH------TTCCBEEEECCEESSCCC
T ss_pred             HHHHHHHHHHHH------cCCCEEEEEecccccccC
Confidence            999998887764      247888899998877543

>2gas_A Isoflavone reductase; NADPH-dependent reductase, oxidoreductase; 1.60A {Medicago sativa}

Probab=99.59  E-value=1.9e-14  Score=122.48  Aligned_cols=146  Identities=16%  Similarity=0.189  Sum_probs=101.7

Q ss_pred             CCEEEEcCCCChHHHHHHHHHHHcCCeEEEEeCCc-------chHHHHHHHHHhhCCCcEEEEEccCCCHHHHHHHHHHH
Q 044010           47 GKVVIITGASSGIGEHLAYEYARRGACLALCARRE-------KSLEEVADTAREIGSPDVITIRADVSKVDDCRSLVEET  119 (248)
Q Consensus        47 ~k~~lVtGg~~gIG~aia~~l~~~G~~V~l~~r~~-------~~~~~~~~~l~~~~~~~v~~~~~D~~~~~~~~~~~~~~  119 (248)
                      +++++||||+|+||.+++++|+++|++|++++|+.       ++.+.. +.+..   ..+.++.+|++|.+++.++++  
T Consensus         2 ~~~vlVtGatG~iG~~l~~~L~~~g~~V~~~~R~~~~~~~~~~~~~~~-~~l~~---~~v~~v~~D~~d~~~l~~~~~--   75 (307)
T 2gas_A            2 ENKILILGPTGAIGRHIVWASIKAGNPTYALVRKTITAANPETKEELI-DNYQS---LGVILLEGDINDHETLVKAIK--   75 (307)
T ss_dssp             CCCEEEESTTSTTHHHHHHHHHHHTCCEEEEECCSCCSSCHHHHHHHH-HHHHH---TTCEEEECCTTCHHHHHHHHT--
T ss_pred             CcEEEEECCCchHHHHHHHHHHhCCCcEEEEECCCcccCChHHHHHHH-HHHHh---CCCEEEEeCCCCHHHHHHHHh--
Confidence            56899999999999999999999999999999986       333222 22322   257889999999998887775  


Q ss_pred             HhHcCCccEEEEccccCCcccccccCChHHHHHHHHhhhHHHHHHHHHHhhhhhhc-CCeEEEEcCccccc------cCC
Q 044010          120 MNHFGRLDHLVNNAGISSVALFEDIVNITDFKQIMNINFWGSVYTTRFAVPHLRYT-KGKIVVLSSAASWL------TAP  192 (248)
Q Consensus       120 ~~~~g~id~vv~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~-~g~iV~isS~~~~~------~~~  192 (248)
                           ++|++||++|...                    +.+...+++++..   .. ..++|  .|..+..      ..|
T Consensus        76 -----~~d~vi~~a~~~~--------------------~~~~~~l~~aa~~---~g~v~~~v--~S~~g~~~~~~~~~~p  125 (307)
T 2gas_A           76 -----QVDIVICAAGRLL--------------------IEDQVKIIKAIKE---AGNVKKFF--PSEFGLDVDRHDAVEP  125 (307)
T ss_dssp             -----TCSEEEECSSSSC--------------------GGGHHHHHHHHHH---HCCCSEEE--CSCCSSCTTSCCCCTT
T ss_pred             -----CCCEEEECCcccc--------------------cccHHHHHHHHHh---cCCceEEe--ecccccCcccccCCCc
Confidence                 6999999998642                    1123334444321   12 35776  3444321      112


Q ss_pred             CCccchHHHHHHHHHHHHHHHHhCCCeEEEEEecCccccCccc
Q 044010          193 RMSFYNASKAALVLFFETLRVELGSDVGVTIVTPGFIESELTQ  235 (248)
Q Consensus       193 ~~~~Y~~sKaal~~l~~~la~~~~~~i~v~~v~pg~v~T~~~~  235 (248)
                      ....| .+|.+++.+.+.    .  +++++.+.||++.+++..
T Consensus       126 ~~~~y-~sK~~~e~~~~~----~--~i~~~~lrp~~~~~~~~~  161 (307)
T 2gas_A          126 VRQVF-EEKASIRRVIEA----E--GVPYTYLCCHAFTGYFLR  161 (307)
T ss_dssp             HHHHH-HHHHHHHHHHHH----H--TCCBEEEECCEETTTTGG
T ss_pred             chhHH-HHHHHHHHHHHH----c--CCCeEEEEcceeeccccc
Confidence            24578 999999887753    2  478888999999886543

>2v6g_A Progesterone 5-beta-reductase; tyrosine-dependent oxidoreductase, oxidoreductase, SDR, cardenolides, cardiac glycosides; HET: NAP; 2.3A {Digitalis lanata} PDB: 2v6f_A*

Probab=99.55  E-value=3.6e-14  Score=123.45  Aligned_cols=160  Identities=16%  Similarity=0.098  Sum_probs=115.1

Q ss_pred             CCEEEEcCCCChHHHHHHHHHHHcC-----CeEEEEeCCcchHHHHHHHHHhhCCCcEEEEEccCCCHHHHHHHHHHHHh
Q 044010           47 GKVVIITGASSGIGEHLAYEYARRG-----ACLALCARREKSLEEVADTAREIGSPDVITIRADVSKVDDCRSLVEETMN  121 (248)
Q Consensus        47 ~k~~lVtGg~~gIG~aia~~l~~~G-----~~V~l~~r~~~~~~~~~~~l~~~~~~~v~~~~~D~~~~~~~~~~~~~~~~  121 (248)
                      +|++|||||+|+||.+++++|+++|     ++|++++|+.....        ....++.++.+|++|.+++.++++..  
T Consensus         1 ~~~vlVtGatG~iG~~l~~~L~~~g~~~~~~~V~~~~r~~~~~~--------~~~~~~~~~~~Dl~d~~~~~~~~~~~--   70 (364)
T 2v6g_A            1 SSVALIVGVTGIIGNSLAEILPLADTPGGPWKVYGVARRTRPAW--------HEDNPINYVQCDISDPDDSQAKLSPL--   70 (364)
T ss_dssp             CEEEEEETTTSHHHHHHHHHTTSTTCTTCSEEEEEEESSCCCSC--------CCSSCCEEEECCTTSHHHHHHHHTTC--
T ss_pred             CCEEEEECCCcHHHHHHHHHHHhCCCCCCceEEEEEeCCCCccc--------cccCceEEEEeecCCHHHHHHHHhcC--
Confidence            5789999999999999999999999     99999999876432        11236788999999999887776532  


Q ss_pred             HcCCccEEEEccccCCcccccccCChHHHHHHHHhhhHHHHHHHHHHhhhhhhcCCeEE-------EEcCccccccC---
Q 044010          122 HFGRLDHLVNNAGISSVALFEDIVNITDFKQIMNINFWGSVYTTRFAVPHLRYTKGKIV-------VLSSAASWLTA---  191 (248)
Q Consensus       122 ~~g~id~vv~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~g~iV-------~isS~~~~~~~---  191 (248)
                        +++|++||+||...          ++.++.+++|+.++.++++++.+... ...++|       ++||...+...   
T Consensus        71 --~~~d~vih~a~~~~----------~~~~~~~~~n~~~~~~l~~a~~~~~~-~~~~~v~~~g~~i~~Ss~~vyg~~~~~  137 (364)
T 2v6g_A           71 --TDVTHVFYVTWANR----------STEQENCEANSKMFRNVLDAVIPNCP-NLKHISLQTGRKHYMGPFESYGKIESH  137 (364)
T ss_dssp             --TTCCEEEECCCCCC----------SSHHHHHHHHHHHHHHHHHHHTTTCT-TCCEEEEECCTHHHHCCGGGTTTSCCC
T ss_pred             --CCCCEEEECCCCCc----------chHHHHHHHhHHHHHHHHHHHHHhcc-ccceEEeccCceEEEechhhccccccC
Confidence              24999999999652          23467888999999999999876521 224666       67876543221   


Q ss_pred             -----------CCCccchHHHHHHHHHHHHHHHHhCCCeEEEEEecCccccCcc
Q 044010          192 -----------PRMSFYNASKAALVLFFETLRVELGSDVGVTIVTPGFIESELT  234 (248)
Q Consensus       192 -----------~~~~~Y~~sKaal~~l~~~la~~~~~~i~v~~v~pg~v~T~~~  234 (248)
                                 +....|    .+.+.+++.++.+++ ++++..+.|+.+..+-.
T Consensus       138 ~~~~~E~~~~~~~~~~y----~~~E~~~~~~~~~~~-~~~~~ilRp~~v~G~~~  186 (364)
T 2v6g_A          138 DPPYTEDLPRLKYMNFY----YDLEDIMLEEVEKKE-GLTWSVHRPGNIFGFSP  186 (364)
T ss_dssp             CSSBCTTSCCCSSCCHH----HHHHHHHHHHHTTST-TCEEEEEEESSEECCCT
T ss_pred             CCCCCccccCCccchhh----HHHHHHHHHHhhcCC-CceEEEECCCceeCCCC
Confidence                       112345    234555555554331 28999999999877543

>1qyd_A Pinoresinol-lariciresinol reductase; NADPH-dependent aromatic alcohol reductases, pcber, PLR, IFR, lignans, isoflavonoids, plant protein; 2.50A {Thuja plicata} SCOP: c.2.1.2

Probab=99.55  E-value=3.7e-14  Score=120.95  Aligned_cols=152  Identities=11%  Similarity=0.061  Sum_probs=103.0

Q ss_pred             CCEEEEcCCCChHHHHHHHHHHHcCCeEEEEeCCcchH-HHHHHHHHhhCCCcEEEEEccCCCHHHHHHHHHHHHhHcCC
Q 044010           47 GKVVIITGASSGIGEHLAYEYARRGACLALCARREKSL-EEVADTAREIGSPDVITIRADVSKVDDCRSLVEETMNHFGR  125 (248)
Q Consensus        47 ~k~~lVtGg~~gIG~aia~~l~~~G~~V~l~~r~~~~~-~~~~~~l~~~~~~~v~~~~~D~~~~~~~~~~~~~~~~~~g~  125 (248)
                      .++++||||+|+||.+++++|+++|++|++++|+.... .+..+.++.....++.++.+|++|.+++.++++       +
T Consensus         4 ~~~ilVtGatG~iG~~l~~~L~~~g~~V~~~~R~~~~~~~~~~~~~~~~~~~~~~~~~~D~~d~~~l~~~~~-------~   76 (313)
T 1qyd_A            4 KSRVLIVGGTGYIGKRIVNASISLGHPTYVLFRPEVVSNIDKVQMLLYFKQLGAKLIEASLDDHQRLVDALK-------Q   76 (313)
T ss_dssp             CCCEEEESTTSTTHHHHHHHHHHTTCCEEEECCSCCSSCHHHHHHHHHHHTTTCEEECCCSSCHHHHHHHHT-------T
T ss_pred             CCEEEEEcCCcHHHHHHHHHHHhCCCcEEEEECCCcccchhHHHHHHHHHhCCeEEEeCCCCCHHHHHHHHh-------C
Confidence            46799999999999999999999999999999985321 111111221112367889999999998887765       6


Q ss_pred             ccEEEEccccCCcccccccCChHHHHHHHHhhhHHHHHHHHHHhhhhhhc-CCeEEEEcCccccc-c------CCCCccc
Q 044010          126 LDHLVNNAGISSVALFEDIVNITDFKQIMNINFWGSVYTTRFAVPHLRYT-KGKIVVLSSAASWL-T------APRMSFY  197 (248)
Q Consensus       126 id~vv~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~-~g~iV~isS~~~~~-~------~~~~~~Y  197 (248)
                      +|++||++|.....                .|+.+...+++++..   .. .+++|+ | ..+.. .      .|....|
T Consensus        77 ~d~vi~~a~~~~~~----------------~~~~~~~~l~~aa~~---~g~v~~~v~-S-~~g~~~~~~~~~~~p~~~~y  135 (313)
T 1qyd_A           77 VDVVISALAGGVLS----------------HHILEQLKLVEAIKE---AGNIKRFLP-S-EFGMDPDIMEHALQPGSITF  135 (313)
T ss_dssp             CSEEEECCCCSSSS----------------TTTTTHHHHHHHHHH---SCCCSEEEC-S-CCSSCTTSCCCCCSSTTHHH
T ss_pred             CCEEEECCccccch----------------hhHHHHHHHHHHHHh---cCCCceEEe-c-CCcCCccccccCCCCCcchH
Confidence            99999999975421                144555555555432   12 357774 4 33321 1      1334578


Q ss_pred             hHHHHHHHHHHHHHHHHhCCCeEEEEEecCccccCc
Q 044010          198 NASKAALVLFFETLRVELGSDVGVTIVTPGFIESEL  233 (248)
Q Consensus       198 ~~sKaal~~l~~~la~~~~~~i~v~~v~pg~v~T~~  233 (248)
                       .+|.+++.+.+.    .  ++++..+.||++.+++
T Consensus       136 -~sK~~~e~~~~~----~--g~~~~ilrp~~~~~~~  164 (313)
T 1qyd_A          136 -IDKRKVRRAIEA----A--SIPYTYVSSNMFAGYF  164 (313)
T ss_dssp             -HHHHHHHHHHHH----T--TCCBCEEECCEEHHHH
T ss_pred             -HHHHHHHHHHHh----c--CCCeEEEEeceecccc
Confidence             999999887752    2  4677788898886643

>3ius_A Uncharacterized conserved protein; APC63810, silicibacter pomeroyi DSS, structural genomics, PSI-2, protein structure initiative; HET: MSE; 1.66A {Ruegeria pomeroyi dss-3}

Probab=99.55  E-value=8e-14  Score=117.49  Aligned_cols=142  Identities=9%  Similarity=0.006  Sum_probs=103.3

Q ss_pred             CEEEEcCCCChHHHHHHHHHHHcCCeEEEEeCCcchHHHHHHHHHhhCCCcEEEEEccCCCHHHHHHHHHHHHhHcCCcc
Q 044010           48 KVVIITGASSGIGEHLAYEYARRGACLALCARREKSLEEVADTAREIGSPDVITIRADVSKVDDCRSLVEETMNHFGRLD  127 (248)
Q Consensus        48 k~~lVtGg~~gIG~aia~~l~~~G~~V~l~~r~~~~~~~~~~~l~~~~~~~v~~~~~D~~~~~~~~~~~~~~~~~~g~id  127 (248)
                      +++||||+ |+||.+++++|+++|++|++++|+.++.+...+       ..+.++.+|++|.+            +.++|
T Consensus         6 ~~ilVtGa-G~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~-------~~~~~~~~D~~d~~------------~~~~d   65 (286)
T 3ius_A            6 GTLLSFGH-GYTARVLSRALAPQGWRIIGTSRNPDQMEAIRA-------SGAEPLLWPGEEPS------------LDGVT   65 (286)
T ss_dssp             CEEEEETC-CHHHHHHHHHHGGGTCEEEEEESCGGGHHHHHH-------TTEEEEESSSSCCC------------CTTCC
T ss_pred             CcEEEECC-cHHHHHHHHHHHHCCCEEEEEEcChhhhhhHhh-------CCCeEEEecccccc------------cCCCC
Confidence            68999998 999999999999999999999999876544322       26889999999932            45899


Q ss_pred             EEEEccccCCcccccccCChHHHHHHHHhhhHHHHHHHHHHhhhhhhcCCeEEEEcCccccccCC-----------CCcc
Q 044010          128 HLVNNAGISSVALFEDIVNITDFKQIMNINFWGSVYTTRFAVPHLRYTKGKIVVLSSAASWLTAP-----------RMSF  196 (248)
Q Consensus       128 ~vv~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~g~iV~isS~~~~~~~~-----------~~~~  196 (248)
                      +|||+|+.....      .  ..          .-.+++.+... .....++|++||...+...+           +...
T Consensus        66 ~vi~~a~~~~~~------~--~~----------~~~l~~a~~~~-~~~~~~~v~~Ss~~vyg~~~~~~~~E~~~~~p~~~  126 (286)
T 3ius_A           66 HLLISTAPDSGG------D--PV----------LAALGDQIAAR-AAQFRWVGYLSTTAVYGDHDGAWVDETTPLTPTAA  126 (286)
T ss_dssp             EEEECCCCBTTB------C--HH----------HHHHHHHHHHT-GGGCSEEEEEEEGGGGCCCTTCEECTTSCCCCCSH
T ss_pred             EEEECCCccccc------c--HH----------HHHHHHHHHhh-cCCceEEEEeecceecCCCCCCCcCCCCCCCCCCH
Confidence            999999965432      1  11          01222222211 12336999999976553221           2346


Q ss_pred             chHHHHHHHHHHHHHHHHhCCCeEEEEEecCccccCc
Q 044010          197 YNASKAALVLFFETLRVELGSDVGVTIVTPGFIESEL  233 (248)
Q Consensus       197 Y~~sKaal~~l~~~la~~~~~~i~v~~v~pg~v~T~~  233 (248)
                      |+.+|.+.+.+.+.+     .++++..+.||.+..+.
T Consensus       127 Y~~sK~~~E~~~~~~-----~~~~~~ilRp~~v~G~~  158 (286)
T 3ius_A          127 RGRWRVMAEQQWQAV-----PNLPLHVFRLAGIYGPG  158 (286)
T ss_dssp             HHHHHHHHHHHHHHS-----TTCCEEEEEECEEEBTT
T ss_pred             HHHHHHHHHHHHHhh-----cCCCEEEEeccceECCC
Confidence            999999999988877     45899999999987764

>3st7_A Capsular polysaccharide synthesis enzyme CAP5F; rossmann fold, cupid domain, short-chain dehydrogenase/reduc NADPH; 2.45A {Staphylococcus aureus} PDB: 2zkl_A 3vhr_A

Probab=99.54  E-value=2.6e-14  Score=125.14  Aligned_cols=136  Identities=19%  Similarity=0.117  Sum_probs=108.5

Q ss_pred             EEEEcCCCChHHHHHHHHHHHcCC-eEEEEeCCcchHHHHHHHHHhhCCCcEEEEEccCCCHHHHHHHHHHHHhHcCCcc
Q 044010           49 VVIITGASSGIGEHLAYEYARRGA-CLALCARREKSLEEVADTAREIGSPDVITIRADVSKVDDCRSLVEETMNHFGRLD  127 (248)
Q Consensus        49 ~~lVtGg~~gIG~aia~~l~~~G~-~V~l~~r~~~~~~~~~~~l~~~~~~~v~~~~~D~~~~~~~~~~~~~~~~~~g~id  127 (248)
                      ++|||||+|+||.+++++|+++|+ +|+..+|+                          +|.++++++++       ++|
T Consensus         2 ~VlVtGatG~iG~~l~~~L~~~g~~~v~~~d~~--------------------------~d~~~l~~~~~-------~~d   48 (369)
T 3st7_A            2 NIVITGAKGFVGKNLKADLTSTTDHHIFEVHRQ--------------------------TKEEELESALL-------KAD   48 (369)
T ss_dssp             EEEEETTTSHHHHHHHHHHHHHCCCEEEECCTT--------------------------CCHHHHHHHHH-------HCS
T ss_pred             EEEEECCCCHHHHHHHHHHHhCCCCEEEEECCC--------------------------CCHHHHHHHhc-------cCC
Confidence            699999999999999999999998 77776664                          67788887776       499


Q ss_pred             EEEEccccCCcccccccCChHHHHHHHHhhhHHHHHHHHHHhhhhhhcCCeEEEEcCccccccCCCCccchHHHHHHHHH
Q 044010          128 HLVNNAGISSVALFEDIVNITDFKQIMNINFWGSVYTTRFAVPHLRYTKGKIVVLSSAASWLTAPRMSFYNASKAALVLF  207 (248)
Q Consensus       128 ~vv~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~g~iV~isS~~~~~~~~~~~~Y~~sKaal~~l  207 (248)
                      ++||+||...+.         ++.+.+++|+.++.++++++...-  .+.++|++||...+.    ...|+.+|.+.+.+
T Consensus        49 ~Vih~a~~~~~~---------~~~~~~~~n~~~~~~l~~a~~~~~--~~~~~v~~Ss~~~~~----~~~Y~~sK~~~E~~  113 (369)
T 3st7_A           49 FIVHLAGVNRPE---------HDKEFSLGNVSYLDHVLDILTRNT--KKPAILLSSSIQATQ----DNPYGESKLQGEQL  113 (369)
T ss_dssp             EEEECCCSBCTT---------CSTTCSSSCCBHHHHHHHHHTTCS--SCCEEEEEEEGGGGS----CSHHHHHHHHHHHH
T ss_pred             EEEECCcCCCCC---------CHHHHHHHHHHHHHHHHHHHHHhC--CCCeEEEeCchhhcC----CCCchHHHHHHHHH
Confidence            999999976532         223457789999999988875321  124899999987654    56899999999999


Q ss_pred             HHHHHHHhCCCeEEEEEecCccccCcc
Q 044010          208 FETLRVELGSDVGVTIVTPGFIESELT  234 (248)
Q Consensus       208 ~~~la~~~~~~i~v~~v~pg~v~T~~~  234 (248)
                      ++.++++.+  +++..+.|+.+..+..
T Consensus       114 ~~~~~~~~g--~~~~i~R~~~v~G~~~  138 (369)
T 3st7_A          114 LREYAEEYG--NTVYIYRWPNLFGKWC  138 (369)
T ss_dssp             HHHHHHHHC--CCEEEEEECEEECTTC
T ss_pred             HHHHHHHhC--CCEEEEECCceeCCCC
Confidence            999999874  6788888988876643

>1qyc_A Phenylcoumaran benzylic ether reductase PT1; NADPH-dependent aromatic alcohol reductases, pcber, PLR, IFR, lignans, isoflavonoids, plant protein; 2.20A {Pinus taeda} SCOP: c.2.1.2

Probab=99.52  E-value=1e-13  Score=117.98  Aligned_cols=148  Identities=16%  Similarity=0.144  Sum_probs=98.6

Q ss_pred             CCEEEEcCCCChHHHHHHHHHHHcCCeEEEEeCCcchH--HHHHHHHHhhCCCcEEEEEccCCCHHHHHHHHHHHHhHcC
Q 044010           47 GKVVIITGASSGIGEHLAYEYARRGACLALCARREKSL--EEVADTAREIGSPDVITIRADVSKVDDCRSLVEETMNHFG  124 (248)
Q Consensus        47 ~k~~lVtGg~~gIG~aia~~l~~~G~~V~l~~r~~~~~--~~~~~~l~~~~~~~v~~~~~D~~~~~~~~~~~~~~~~~~g  124 (248)
                      .++++||||+|+||.+++++|+++|++|++++|+....  .+..+.++......+.++.+|++|.+++.++++       
T Consensus         4 ~~~ilVtGatG~iG~~l~~~L~~~g~~V~~l~R~~~~~~~~~~~~~~~~l~~~~v~~v~~D~~d~~~l~~~~~-------   76 (308)
T 1qyc_A            4 RSRILLIGATGYIGRHVAKASLDLGHPTFLLVRESTASSNSEKAQLLESFKASGANIVHGSIDDHASLVEAVK-------   76 (308)
T ss_dssp             CCCEEEESTTSTTHHHHHHHHHHTTCCEEEECCCCCTTTTHHHHHHHHHHHTTTCEEECCCTTCHHHHHHHHH-------
T ss_pred             CCEEEEEcCCcHHHHHHHHHHHhCCCCEEEEECCcccccCHHHHHHHHHHHhCCCEEEEeccCCHHHHHHHHc-------
Confidence            46899999999999999999999999999999985432  111222222112367889999999999888775       


Q ss_pred             CccEEEEccccCCcccccccCChHHHHHHHHhhhHHHHHHHHHHhhhhhhc-CCeEEEEcCcccccc------CCCCccc
Q 044010          125 RLDHLVNNAGISSVALFEDIVNITDFKQIMNINFWGSVYTTRFAVPHLRYT-KGKIVVLSSAASWLT------APRMSFY  197 (248)
Q Consensus       125 ~id~vv~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~-~g~iV~isS~~~~~~------~~~~~~Y  197 (248)
                      ++|++||++|...                    +.+...+++++..   .. .+++|. |+ .+...      .|....|
T Consensus        77 ~~d~vi~~a~~~~--------------------~~~~~~l~~aa~~---~g~v~~~v~-S~-~g~~~~~~~~~~p~~~~y  131 (308)
T 1qyc_A           77 NVDVVISTVGSLQ--------------------IESQVNIIKAIKE---VGTVKRFFP-SE-FGNDVDNVHAVEPAKSVF  131 (308)
T ss_dssp             TCSEEEECCCGGG--------------------SGGGHHHHHHHHH---HCCCSEEEC-SC-CSSCTTSCCCCTTHHHHH
T ss_pred             CCCEEEECCcchh--------------------hhhHHHHHHHHHh---cCCCceEee-cc-cccCccccccCCcchhHH
Confidence            5999999998532                    1122333343321   12 357763 43 33211      1223468


Q ss_pred             hHHHHHHHHHHHHHHHHhCCCeEEEEEecCccccCc
Q 044010          198 NASKAALVLFFETLRVELGSDVGVTIVTPGFIESEL  233 (248)
Q Consensus       198 ~~sKaal~~l~~~la~~~~~~i~v~~v~pg~v~T~~  233 (248)
                       .+|.+++.+.+.    .  ++++..+.||.+.+++
T Consensus       132 -~sK~~~e~~~~~----~--~~~~~~~r~~~~~~~~  160 (308)
T 1qyc_A          132 -EVKAKVRRAIEA----E--GIPYTYVSSNCFAGYF  160 (308)
T ss_dssp             -HHHHHHHHHHHH----H--TCCBEEEECCEEHHHH
T ss_pred             -HHHHHHHHHHHh----c--CCCeEEEEeceecccc
Confidence             999999887753    2  3677778898876643

>3e48_A Putative nucleoside-diphosphate-sugar epimerase; alpha-beta protein., structural genomics, PSI-2, protein STR initiative; 1.60A {Staphylococcus aureus subsp}

Probab=99.51  E-value=3.1e-13  Score=114.09  Aligned_cols=145  Identities=13%  Similarity=0.081  Sum_probs=100.1

Q ss_pred             EEEEcCCCChHHHHHHHHHHHc-CCeEEEEeCCcchHHHHHHHHHhhCCCcEEEEEccCCCHHHHHHHHHHHHhHcCCcc
Q 044010           49 VVIITGASSGIGEHLAYEYARR-GACLALCARREKSLEEVADTAREIGSPDVITIRADVSKVDDCRSLVEETMNHFGRLD  127 (248)
Q Consensus        49 ~~lVtGg~~gIG~aia~~l~~~-G~~V~l~~r~~~~~~~~~~~l~~~~~~~v~~~~~D~~~~~~~~~~~~~~~~~~g~id  127 (248)
                      ++|||||+|+||.+++++|+++ |++|++++|+.++.+..       ...++.++.+|++|.+++.++++       ++|
T Consensus         2 ~ilVtGatG~iG~~l~~~L~~~~g~~V~~~~R~~~~~~~~-------~~~~v~~~~~D~~d~~~l~~~~~-------~~d   67 (289)
T 3e48_A            2 NIMLTGATGHLGTHITNQAIANHIDHFHIGVRNVEKVPDD-------WRGKVSVRQLDYFNQESMVEAFK-------GMD   67 (289)
T ss_dssp             CEEEETTTSHHHHHHHHHHHHTTCTTEEEEESSGGGSCGG-------GBTTBEEEECCTTCHHHHHHHTT-------TCS
T ss_pred             EEEEEcCCchHHHHHHHHHhhCCCCcEEEEECCHHHHHHh-------hhCCCEEEEcCCCCHHHHHHHHh-------CCC
Confidence            5899999999999999999998 99999999988654321       12368899999999998887764       799


Q ss_pred             EEEEccccCCcccccccCChHHHHHHHHhhhHHHHHHHHHHhhhhhhcC-CeEEEEcCccccccCCCCccchHHHHHHHH
Q 044010          128 HLVNNAGISSVALFEDIVNITDFKQIMNINFWGSVYTTRFAVPHLRYTK-GKIVVLSSAASWLTAPRMSFYNASKAALVL  206 (248)
Q Consensus       128 ~vv~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~-g~iV~isS~~~~~~~~~~~~Y~~sKaal~~  206 (248)
                      ++||+||.....        .       .|+.+...+++++    ++.+ +++|++||......    ..|..++...  
T Consensus        68 ~vi~~a~~~~~~--------~-------~~~~~~~~l~~aa----~~~gv~~iv~~Ss~~~~~~----~~~~~~~~~~--  122 (289)
T 3e48_A           68 TVVFIPSIIHPS--------F-------KRIPEVENLVYAA----KQSGVAHIIFIGYYADQHN----NPFHMSPYFG--  122 (289)
T ss_dssp             EEEECCCCCCSH--------H-------HHHHHHHHHHHHH----HHTTCCEEEEEEESCCSTT----CCSTTHHHHH--
T ss_pred             EEEEeCCCCccc--------h-------hhHHHHHHHHHHH----HHcCCCEEEEEcccCCCCC----CCCccchhHH--
Confidence            999999864321        1       1444544444443    4333 69999999553222    2344333221  


Q ss_pred             HHHHHHHHhCCCeEEEEEecCccccCcc
Q 044010          207 FFETLRVELGSDVGVTIVTPGFIESELT  234 (248)
Q Consensus       207 l~~~la~~~~~~i~v~~v~pg~v~T~~~  234 (248)
                      .+.....+.  +++++.+.||.+.+++.
T Consensus       123 ~~e~~~~~~--g~~~~ilrp~~~~~~~~  148 (289)
T 3e48_A          123 YASRLLSTS--GIDYTYVRMAMYMDPLK  148 (289)
T ss_dssp             HHHHHHHHH--CCEEEEEEECEESTTHH
T ss_pred             HHHHHHHHc--CCCEEEEeccccccccH
Confidence            222222222  58999999999988754

>3oh8_A Nucleoside-diphosphate sugar epimerase (SULA FAMI; DUF1731_C, northeast structural genomics consortium, NESG, C PSI-biology; 2.00A {Corynebacterium glutamicum}

Probab=99.50  E-value=2.1e-13  Score=124.75  Aligned_cols=154  Identities=14%  Similarity=0.075  Sum_probs=111.3

Q ss_pred             CCEEEEcCCCChHHHHHHHHHHHcCCeEEEEeCCcchHHHHHHHHHhhCCCcEEEEEccCCCHHHHHHHHHHHHhHcCCc
Q 044010           47 GKVVIITGASSGIGEHLAYEYARRGACLALCARREKSLEEVADTAREIGSPDVITIRADVSKVDDCRSLVEETMNHFGRL  126 (248)
Q Consensus        47 ~k~~lVtGg~~gIG~aia~~l~~~G~~V~l~~r~~~~~~~~~~~l~~~~~~~v~~~~~D~~~~~~~~~~~~~~~~~~g~i  126 (248)
                      ++++|||||+|+||.+++++|+++|++|++++|+..+.+               .+.+|+.+..         .+.+.++
T Consensus       147 ~m~VLVTGatG~IG~~l~~~L~~~G~~V~~l~R~~~~~~---------------~v~~d~~~~~---------~~~l~~~  202 (516)
T 3oh8_A          147 PLTVAITGSRGLVGRALTAQLQTGGHEVIQLVRKEPKPG---------------KRFWDPLNPA---------SDLLDGA  202 (516)
T ss_dssp             CCEEEEESTTSHHHHHHHHHHHHTTCEEEEEESSSCCTT---------------CEECCTTSCC---------TTTTTTC
T ss_pred             CCEEEEECCCCHHHHHHHHHHHHCCCEEEEEECCCCCcc---------------ceeecccchh---------HHhcCCC
Confidence            679999999999999999999999999999999876421               1567776431         2234589


Q ss_pred             cEEEEccccCCcccccccCChHHHHHHHHhhhHHHHHHHHHHhhhhhhcCCeEEEEcCccccc-c----------CCCCc
Q 044010          127 DHLVNNAGISSVALFEDIVNITDFKQIMNINFWGSVYTTRFAVPHLRYTKGKIVVLSSAASWL-T----------APRMS  195 (248)
Q Consensus       127 d~vv~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~g~iV~isS~~~~~-~----------~~~~~  195 (248)
                      |+|||+||......    .+.++.+..+++|+.++.++++++...  ...+++|++||...+. .          ..+..
T Consensus       203 D~Vih~A~~~~~~~----~~~~~~~~~~~~Nv~gt~~ll~a~a~~--~~~~r~V~~SS~~vyg~~~~~~~~~E~~~~~~~  276 (516)
T 3oh8_A          203 DVLVHLAGEPIFGR----FNDSHKEAIRESRVLPTKFLAELVAES--TQCTTMISASAVGFYGHDRGDEILTEESESGDD  276 (516)
T ss_dssp             SEEEECCCC---------CCGGGHHHHHHHTHHHHHHHHHHHHHC--SSCCEEEEEEEGGGGCSEEEEEEECTTSCCCSS
T ss_pred             CEEEECCCCccccc----cchhHHHHHHHHHHHHHHHHHHHHHhc--CCCCEEEEeCcceEecCCCCCCccCCCCCCCcC
Confidence            99999999764331    234667889999999999999974421  1336899999977554 1          11334


Q ss_pred             cchHHHHHHHHHHHHHHHHhCCCeEEEEEecCccccCc
Q 044010          196 FYNASKAALVLFFETLRVELGSDVGVTIVTPGFIESEL  233 (248)
Q Consensus       196 ~Y~~sKaal~~l~~~la~~~~~~i~v~~v~pg~v~T~~  233 (248)
                      .|+.+|...+.+.+... +  .+++++.+.||.+.++-
T Consensus       277 ~y~~~~~~~E~~~~~~~-~--~gi~~~ilRp~~v~Gp~  311 (516)
T 3oh8_A          277 FLAEVCRDWEHATAPAS-D--AGKRVAFIRTGVALSGR  311 (516)
T ss_dssp             HHHHHHHHHHHTTHHHH-H--TTCEEEEEEECEEEBTT
T ss_pred             hHHHHHHHHHHHHHHHH-h--CCCCEEEEEeeEEECCC
Confidence            68888888777654332 2  25899999999998864

>3c1o_A Eugenol synthase; phenylpropene, PIP reductase, short-chain dehydrogenase/reductase, oxidoreductase; HET: NAP; 1.80A {Clarkia breweri}

Probab=99.49  E-value=1.5e-13  Score=117.74  Aligned_cols=145  Identities=14%  Similarity=0.110  Sum_probs=97.4

Q ss_pred             CCEEEEcCCCChHHHHHHHHHHHcCCeEEEEeCCc-c----hHHHHHHHHHhhCCCcEEEEEccCCCHHHHHHHHHHHHh
Q 044010           47 GKVVIITGASSGIGEHLAYEYARRGACLALCARRE-K----SLEEVADTAREIGSPDVITIRADVSKVDDCRSLVEETMN  121 (248)
Q Consensus        47 ~k~~lVtGg~~gIG~aia~~l~~~G~~V~l~~r~~-~----~~~~~~~~l~~~~~~~v~~~~~D~~~~~~~~~~~~~~~~  121 (248)
                      .++++||||+|+||.+++++|+++|++|++++|+. .    ...+..+.+..   ..+.++.+|++|.+++.++++    
T Consensus         4 ~~~ilVtGatG~iG~~l~~~L~~~g~~V~~~~R~~~~~~~~~~~~~l~~~~~---~~v~~v~~D~~d~~~l~~a~~----   76 (321)
T 3c1o_A            4 MEKIIIYGGTGYIGKFMVRASLSFSHPTFIYARPLTPDSTPSSVQLREEFRS---MGVTIIEGEMEEHEKMVSVLK----   76 (321)
T ss_dssp             CCCEEEETTTSTTHHHHHHHHHHTTCCEEEEECCCCTTCCHHHHHHHHHHHH---TTCEEEECCTTCHHHHHHHHT----
T ss_pred             ccEEEEEcCCchhHHHHHHHHHhCCCcEEEEECCcccccChHHHHHHHHhhc---CCcEEEEecCCCHHHHHHHHc----
Confidence            46799999999999999999999999999999986 2    11111222222   257889999999998888775    


Q ss_pred             HcCCccEEEEccccCCcccccccCChHHHHHHHHhhhHHHHHHHHHHhhhhhhc-CCeEEEEcCcccccc---C---CCC
Q 044010          122 HFGRLDHLVNNAGISSVALFEDIVNITDFKQIMNINFWGSVYTTRFAVPHLRYT-KGKIVVLSSAASWLT---A---PRM  194 (248)
Q Consensus       122 ~~g~id~vv~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~-~g~iV~isS~~~~~~---~---~~~  194 (248)
                         ++|++||++|...                    +.+...+++++..   .. .+++|  .|..+...   .   +..
T Consensus        77 ---~~d~vi~~a~~~~--------------------~~~~~~l~~aa~~---~g~v~~~v--~S~~g~~~~~~~~~~p~~  128 (321)
T 3c1o_A           77 ---QVDIVISALPFPM--------------------ISSQIHIINAIKA---AGNIKRFL--PSDFGCEEDRIKPLPPFE  128 (321)
T ss_dssp             ---TCSEEEECCCGGG--------------------SGGGHHHHHHHHH---HCCCCEEE--CSCCSSCGGGCCCCHHHH
T ss_pred             ---CCCEEEECCCccc--------------------hhhHHHHHHHHHH---hCCccEEe--ccccccCccccccCCCcc
Confidence               5999999998532                    1222333333321   12 35776  34443211   1   113


Q ss_pred             ccchHHHHHHHHHHHHHHHHhCCCeEEEEEecCccccCc
Q 044010          195 SFYNASKAALVLFFETLRVELGSDVGVTIVTPGFIESEL  233 (248)
Q Consensus       195 ~~Y~~sKaal~~l~~~la~~~~~~i~v~~v~pg~v~T~~  233 (248)
                      ..| .+|.+++.+.+.    .  ++++..+.||.+.++.
T Consensus       129 ~~y-~sK~~~e~~~~~----~--~~~~~~lrp~~~~~~~  160 (321)
T 3c1o_A          129 SVL-EKKRIIRRAIEA----A--ALPYTYVSANCFGAYF  160 (321)
T ss_dssp             HHH-HHHHHHHHHHHH----H--TCCBEEEECCEEHHHH
T ss_pred             hHH-HHHHHHHHHHHH----c--CCCeEEEEeceecccc
Confidence            479 999999988763    2  3666778888776543

>2r6j_A Eugenol synthase 1; phenylpropene, PIP reductase, short-chain dehydrogenase/reductase, plant protein; HET: NDP; 1.50A {Ocimum basilicum} PDB: 2qys_A 2qx7_A* 2qzz_A* 2r2g_A* 3c3x_A* 2qw8_A*

Probab=99.47  E-value=2.4e-13  Score=116.45  Aligned_cols=144  Identities=13%  Similarity=0.154  Sum_probs=97.0

Q ss_pred             CCEEEEcCCCChHHHHHHHHHHHcCCeEEEEeCCcchHHHHHHHHHhhCCCcEEEEEccCCCHHHHHHHHHHHHhHcCCc
Q 044010           47 GKVVIITGASSGIGEHLAYEYARRGACLALCARREKSLEEVADTAREIGSPDVITIRADVSKVDDCRSLVEETMNHFGRL  126 (248)
Q Consensus        47 ~k~~lVtGg~~gIG~aia~~l~~~G~~V~l~~r~~~~~~~~~~~l~~~~~~~v~~~~~D~~~~~~~~~~~~~~~~~~g~i  126 (248)
                      .|+++||||+|+||.+++++|+++|++|++++|+.+...+..+.+..   ..+.++.+|++|.+++.++++       ++
T Consensus        11 ~~~ilVtGatG~iG~~l~~~L~~~g~~V~~l~R~~~~~~~~~~~l~~---~~v~~v~~Dl~d~~~l~~a~~-------~~   80 (318)
T 2r6j_A           11 KSKILIFGGTGYIGNHMVKGSLKLGHPTYVFTRPNSSKTTLLDEFQS---LGAIIVKGELDEHEKLVELMK-------KV   80 (318)
T ss_dssp             CCCEEEETTTSTTHHHHHHHHHHTTCCEEEEECTTCSCHHHHHHHHH---TTCEEEECCTTCHHHHHHHHT-------TC
T ss_pred             CCeEEEECCCchHHHHHHHHHHHCCCcEEEEECCCCchhhHHHHhhc---CCCEEEEecCCCHHHHHHHHc-------CC
Confidence            35799999999999999999999999999999987522222223332   257889999999998888775       59


Q ss_pred             cEEEEccccCCcccccccCChHHHHHHHHhhhHHHHHHHHHHhhhhhhc-CCeEEEEcCcccccc---C---CCCccchH
Q 044010          127 DHLVNNAGISSVALFEDIVNITDFKQIMNINFWGSVYTTRFAVPHLRYT-KGKIVVLSSAASWLT---A---PRMSFYNA  199 (248)
Q Consensus       127 d~vv~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~-~g~iV~isS~~~~~~---~---~~~~~Y~~  199 (248)
                      |+|||+++...                    +.+...+++++..   .. .+++|+ |+ .+...   .   |....| .
T Consensus        81 d~vi~~a~~~~--------------------~~~~~~l~~aa~~---~g~v~~~v~-S~-~g~~~~~~~~~~p~~~~y-~  134 (318)
T 2r6j_A           81 DVVISALAFPQ--------------------ILDQFKILEAIKV---AGNIKRFLP-SD-FGVEEDRINALPPFEALI-E  134 (318)
T ss_dssp             SEEEECCCGGG--------------------STTHHHHHHHHHH---HCCCCEEEC-SC-CSSCTTTCCCCHHHHHHH-H
T ss_pred             CEEEECCchhh--------------------hHHHHHHHHHHHh---cCCCCEEEe-ec-cccCcccccCCCCcchhH-H
Confidence            99999998532                    1122333333321   12 357763 43 33211   1   113468 9


Q ss_pred             HHHHHHHHHHHHHHHhCCCeEEEEEecCccccC
Q 044010          200 SKAALVLFFETLRVELGSDVGVTIVTPGFIESE  232 (248)
Q Consensus       200 sKaal~~l~~~la~~~~~~i~v~~v~pg~v~T~  232 (248)
                      +|.+++.+.+.    .  ++++..+.||.+...
T Consensus       135 sK~~~e~~~~~----~--~~~~~~lr~~~~~~~  161 (318)
T 2r6j_A          135 RKRMIRRAIEE----A--NIPYTYVSANCFASY  161 (318)
T ss_dssp             HHHHHHHHHHH----T--TCCBEEEECCEEHHH
T ss_pred             HHHHHHHHHHh----c--CCCeEEEEcceehhh
Confidence            99998887753    2  367777888877554

>1lu9_A Methylene tetrahydromethanopterin dehydrogenase; alpha/beta twisted open sheet structure, oxidoreductase; 1.90A {Methylobacterium extorquens} SCOP: c.2.1.7 c.58.1.4 PDB: 1lua_A*

Probab=99.43  E-value=3.2e-14  Score=120.81  Aligned_cols=111  Identities=17%  Similarity=0.178  Sum_probs=85.8

Q ss_pred             cCCCCCEEEEcCCCChHHHHHHHHHHHcCCeEEEEeCCcchHHHHHHHHHhhCCCcEEEEEccCCCHHHHHHHHHHHHhH
Q 044010           43 EDVSGKVVIITGASSGIGEHLAYEYARRGACLALCARREKSLEEVADTAREIGSPDVITIRADVSKVDDCRSLVEETMNH  122 (248)
Q Consensus        43 ~~~~~k~~lVtGg~~gIG~aia~~l~~~G~~V~l~~r~~~~~~~~~~~l~~~~~~~v~~~~~D~~~~~~~~~~~~~~~~~  122 (248)
                      .+++||+++||||+||+|+++++.|+++|++|++++|+.++.++..+++....  ++.++.+|+++.++++++++     
T Consensus       115 ~~l~gk~vlVtGaaGGiG~aia~~L~~~G~~V~i~~R~~~~~~~l~~~~~~~~--~~~~~~~D~~~~~~~~~~~~-----  187 (287)
T 1lu9_A          115 GSVKGKKAVVLAGTGPVGMRSAALLAGEGAEVVLCGRKLDKAQAAADSVNKRF--KVNVTAAETADDASRAEAVK-----  187 (287)
T ss_dssp             SCCTTCEEEEETCSSHHHHHHHHHHHHTTCEEEEEESSHHHHHHHHHHHHHHH--TCCCEEEECCSHHHHHHHTT-----
T ss_pred             cCCCCCEEEEECCCcHHHHHHHHHHHHCcCEEEEEECCHHHHHHHHHHHHhcC--CcEEEEecCCCHHHHHHHHH-----
Confidence            35789999999999999999999999999999999999888888877776532  35678899999988877664     


Q ss_pred             cCCccEEEEccccCCc-ccccccCChHHHHHHHHhhhHHHH
Q 044010          123 FGRLDHLVNNAGISSV-ALFEDIVNITDFKQIMNINFWGSV  162 (248)
Q Consensus       123 ~g~id~vv~~ag~~~~-~~~~~~~~~~~~~~~~~~n~~~~~  162 (248)
                        .+|++|||+|.... .+..+....++++..+++|+.+++
T Consensus       188 --~~DvlVn~ag~g~~~~~~~~~~~~~~~~~~~dvn~~~~~  226 (287)
T 1lu9_A          188 --GAHFVFTAGAIGLELLPQAAWQNESSIEIVADYNAQPPL  226 (287)
T ss_dssp             --TCSEEEECCCTTCCSBCHHHHTTCTTCCEEEECCCSSSC
T ss_pred             --hCCEEEECCCccccCCChhHcCchHHHHHHHHhhhhhhH
Confidence              48999999986432 222121112556667888888776

>1u7z_A Coenzyme A biosynthesis bifunctional protein coabc; ligase; HET: PMT; 2.30A {Escherichia coli} SCOP: c.72.3.1 PDB: 1u7w_A* 1u7u_A* 1u80_A*

Probab=99.15  E-value=1.8e-10  Score=93.84  Aligned_cols=82  Identities=23%  Similarity=0.257  Sum_probs=63.6

Q ss_pred             CCCCCEEEEcCC----------------CChHHHHHHHHHHHcCCeEEEEeCCcchHHHHHHHHHhhCCCcEEEEEccCC
Q 044010           44 DVSGKVVIITGA----------------SSGIGEHLAYEYARRGACLALCARREKSLEEVADTAREIGSPDVITIRADVS  107 (248)
Q Consensus        44 ~~~~k~~lVtGg----------------~~gIG~aia~~l~~~G~~V~l~~r~~~~~~~~~~~l~~~~~~~v~~~~~D~~  107 (248)
                      +++||++|||||                +||||+++|+.|+++|++|++++++.. ++        .. ..+  -.+|++
T Consensus         5 ~l~gk~vlVTgG~T~E~iDpVR~itN~SSg~iG~aiA~~~~~~Ga~V~l~~~~~~-l~--------~~-~g~--~~~dv~   72 (226)
T 1u7z_A            5 DLKHLNIMITAGPTREPLDPVRYISDHSSGKMGFAIAAAAARRGANVTLVSGPVS-LP--------TP-PFV--KRVDVM   72 (226)
T ss_dssp             TTTTCEEEEEESBCEEESSSSEEEEECCCSHHHHHHHHHHHHTTCEEEEEECSCC-CC--------CC-TTE--EEEECC
T ss_pred             CCCCCEEEEECCCCCcccCceeeccCCCccHHHHHHHHHHHHCCCEEEEEECCcc-cc--------cC-CCC--eEEccC
Confidence            689999999999                699999999999999999999988652 11        01 122  246777


Q ss_pred             CHHHHHHHHHHHHhHcCCccEEEEccccCCccc
Q 044010          108 KVDDCRSLVEETMNHFGRLDHLVNNAGISSVAL  140 (248)
Q Consensus       108 ~~~~~~~~~~~~~~~~g~id~vv~~ag~~~~~~  140 (248)
                      +.+   ++++.+.+.++++|++|||||+....+
T Consensus        73 ~~~---~~~~~v~~~~~~~Dili~~Aav~d~~p  102 (226)
T 1u7z_A           73 TAL---EMEAAVNASVQQQNIFIGCAAVADYRA  102 (226)
T ss_dssp             SHH---HHHHHHHHHGGGCSEEEECCBCCSEEE
T ss_pred             cHH---HHHHHHHHhcCCCCEEEECCcccCCCC
Confidence            754   466677778899999999999875443

>4b4o_A Epimerase family protein SDR39U1; isomerase; HET: NDP PE4; 2.70A {Homo sapiens}

Probab=99.15  E-value=9.5e-10  Score=93.10  Aligned_cols=151  Identities=17%  Similarity=0.177  Sum_probs=95.3

Q ss_pred             EEEEcCCCChHHHHHHHHHHHcCCeEEEEeCCcchHHHHHHHHHhhCCCcEEEEEccCCCHHHHHHHHHHHHhHcCCccE
Q 044010           49 VVIITGASSGIGEHLAYEYARRGACLALCARREKSLEEVADTAREIGSPDVITIRADVSKVDDCRSLVEETMNHFGRLDH  128 (248)
Q Consensus        49 ~~lVtGg~~gIG~aia~~l~~~G~~V~l~~r~~~~~~~~~~~l~~~~~~~v~~~~~D~~~~~~~~~~~~~~~~~~g~id~  128 (248)
                      ++|||||+|.||.+++++|+++|++|+++.|++.+             ..+   ..|     .   +   ..+.+.++|.
T Consensus         2 kILVTGatGfIG~~L~~~L~~~G~~V~~l~R~~~~-------------~~~---~~~-----~---~---~~~~l~~~d~   54 (298)
T 4b4o_A            2 RVLVGGGTGFIGTALTQLLNARGHEVTLVSRKPGP-------------GRI---TWD-----E---L---AASGLPSCDA   54 (298)
T ss_dssp             EEEEETTTSHHHHHHHHHHHHTTCEEEEEESSCCT-------------TEE---EHH-----H---H---HHHCCCSCSE
T ss_pred             EEEEECCCCHHHHHHHHHHHHCCCEEEEEECCCCc-------------Cee---ecc-----h---h---hHhhccCCCE
Confidence            58999999999999999999999999999997642             111   111     1   1   1123568999


Q ss_pred             EEEccccCCcccccccCChHHHHHHHHhhhHHHHHHHHHHhhhhhhcCCeEEEEcCccccccCC-----------CCccc
Q 044010          129 LVNNAGISSVALFEDIVNITDFKQIMNINFWGSVYTTRFAVPHLRYTKGKIVVLSSAASWLTAP-----------RMSFY  197 (248)
Q Consensus       129 vv~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~g~iV~isS~~~~~~~~-----------~~~~Y  197 (248)
                      +||.||......... .+.+...+.++.|+.++-.+.+.+... ......+|+.||...+.+..           ....|
T Consensus        55 vihla~~~i~~~~~~-~~~~~~~~~~~~~v~~t~~l~~~~~~~-~~~~~~~i~~Ss~~vyg~~~~~~~~E~~p~~~~~~~  132 (298)
T 4b4o_A           55 AVNLAGENILNPLRR-WNETFQKEVLGSRLETTQLLAKAITKA-PQPPKAWVLVTGVAYYQPSLTAEYDEDSPGGDFDFF  132 (298)
T ss_dssp             EEECCCCCSSCTTSC-CCHHHHHHHHHHHHHHHHHHHHHHHHC-SSCCSEEEEEEEGGGSCCCSSCCBCTTCCCSCSSHH
T ss_pred             EEEeccCcccchhhh-hhhhhhhhhhhHHHHHHHHHHHHHHHh-CCCceEEEEEeeeeeecCCCCCcccccCCccccchh
Confidence            999998543222211 244566778889999988887765433 11234577777766553321           12234


Q ss_pred             hHHHHHHHHHHHHHHHHhCCCeEEEEEecCccccC
Q 044010          198 NASKAALVLFFETLRVELGSDVGVTIVTPGFIESE  232 (248)
Q Consensus       198 ~~sKaal~~l~~~la~~~~~~i~v~~v~pg~v~T~  232 (248)
                      +..|...+..    +.....++++..+.||.|..+
T Consensus       133 ~~~~~~~e~~----~~~~~~~~~~~~~r~~~v~g~  163 (298)
T 4b4o_A          133 SNLVTKWEAA----ARLPGDSTRQVVVRSGVVLGR  163 (298)
T ss_dssp             HHHHHHHHHH----HCCSSSSSEEEEEEECEEECT
T ss_pred             HHHHHHHHHH----HHhhccCCceeeeeeeeEEcC
Confidence            4444443321    111123489999999988665

>1y7t_A Malate dehydrogenase; NAD-dependent-MDH-NADPH complex, oxidoreductase; HET: NDP; 1.65A {Thermus thermophilus} SCOP: c.2.1.5 d.162.1.1 PDB: 1iz9_A* 2cvq_A* 1bmd_A* 1bdm_A* 1wze_A* 1wzi_A*

Probab=99.14  E-value=1.9e-10  Score=99.29  Aligned_cols=150  Identities=18%  Similarity=0.118  Sum_probs=102.4

Q ss_pred             CEEEEcCCCChHHHHHHHHHHHcCC-------eEEEEeCCc--chHHHHHHHHHhhCCCcEEEEEccCCCHHHHHHHHHH
Q 044010           48 KVVIITGASSGIGEHLAYEYARRGA-------CLALCARRE--KSLEEVADTAREIGSPDVITIRADVSKVDDCRSLVEE  118 (248)
Q Consensus        48 k~~lVtGg~~gIG~aia~~l~~~G~-------~V~l~~r~~--~~~~~~~~~l~~~~~~~v~~~~~D~~~~~~~~~~~~~  118 (248)
                      .+++||||+|.||.+++..|+++|+       +|++.+++.  ++.+.....+....   +.++ .|+++.++..+++  
T Consensus         5 mkVlVtGaaGfIG~~l~~~L~~~g~~~~~~~~ev~l~D~~~~~~~~~g~~~dl~~~~---~~~~-~di~~~~~~~~a~--   78 (327)
T 1y7t_A            5 VRVAVTGAAGQIGYSLLFRIAAGEMLGKDQPVILQLLEIPQAMKALEGVVMELEDCA---FPLL-AGLEATDDPKVAF--   78 (327)
T ss_dssp             EEEEESSTTSHHHHHHHHHHHTTTTTCTTCCEEEEEECCGGGHHHHHHHHHHHHTTT---CTTE-EEEEEESCHHHHT--
T ss_pred             CEEEEECCCCHHHHHHHHHHHhCCCCCCCCCCEEEEEeCCCchhhccchhhhhhccc---cccc-CCeEeccChHHHh--
Confidence            4799999999999999999999986       899998864  22222222333221   1112 4666655554443  


Q ss_pred             HHhHcCCccEEEEccccCCcccccccCChHHHHHHHHhhhHHHHHHHHHHhhhhhhcCCeEEEEcCcccc--------c-
Q 044010          119 TMNHFGRLDHLVNNAGISSVALFEDIVNITDFKQIMNINFWGSVYTTRFAVPHLRYTKGKIVVLSSAASW--------L-  189 (248)
Q Consensus       119 ~~~~~g~id~vv~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~g~iV~isS~~~~--------~-  189 (248)
                           .+.|++||.||.....   .    ++.++.+++|+.+...+++.+...- ..+++++++|+....        . 
T Consensus        79 -----~~~D~Vih~Ag~~~~~---~----~~~~~~~~~Nv~~t~~l~~a~~~~~-~~~~~vvv~snp~~~~~~~~~~~~~  145 (327)
T 1y7t_A           79 -----KDADYALLVGAAPRKA---G----MERRDLLQVNGKIFTEQGRALAEVA-KKDVKVLVVGNPANTNALIAYKNAP  145 (327)
T ss_dssp             -----TTCSEEEECCCCCCCT---T----CCHHHHHHHHHHHHHHHHHHHHHHS-CTTCEEEECSSSHHHHHHHHHHTCT
T ss_pred             -----CCCCEEEECCCcCCCC---C----CCHHHHHHHHHHHHHHHHHHHHhhc-CCCeEEEEeCCchhhhHHHHHHHcC
Confidence                 3699999999976422   1    2235678899999999999876541 123578888775411        1 


Q ss_pred             cCCCCccchHHHHHHHHHHHHHHHHhC
Q 044010          190 TAPRMSFYNASKAALVLFFETLRVELG  216 (248)
Q Consensus       190 ~~~~~~~Y~~sKaal~~l~~~la~~~~  216 (248)
                      +.++...|+.+|..-+.+.+.++..++
T Consensus       146 ~~~p~~~yg~tkl~~er~~~~~a~~~g  172 (327)
T 1y7t_A          146 GLNPRNFTAMTRLDHNRAKAQLAKKTG  172 (327)
T ss_dssp             TSCGGGEEECCHHHHHHHHHHHHHHHT
T ss_pred             CCChhheeccchHHHHHHHHHHHHHhC
Confidence            233445799999999999999998875

>2gk4_A Conserved hypothetical protein; alpha-beta-alpha sandwich, flavoprotein, structural genomics protein structure initiative; 1.83A {Streptococcus pneumoniae}

Probab=98.98  E-value=1.8e-09  Score=88.18  Aligned_cols=83  Identities=11%  Similarity=0.226  Sum_probs=62.4

Q ss_pred             CCCEEEEcCC----------------CChHHHHHHHHHHHcCCeEEEEeCCcchHHHHHHHHHhhCCCcEEEEEccCCCH
Q 044010           46 SGKVVIITGA----------------SSGIGEHLAYEYARRGACLALCARREKSLEEVADTAREIGSPDVITIRADVSKV  109 (248)
Q Consensus        46 ~~k~~lVtGg----------------~~gIG~aia~~l~~~G~~V~l~~r~~~~~~~~~~~l~~~~~~~v~~~~~D~~~~  109 (248)
                      +||++|||||                +|++|.++|+.|+++|++|++++|+... ..       .....+..+  |+   
T Consensus         2 ~gk~vlVTgG~T~E~IDpVR~ItN~SSG~mG~aiA~~~~~~Ga~V~lv~~~~~~-~~-------~~~~~~~~~--~v---   68 (232)
T 2gk4_A            2 NAMKILVTSGGTSEAIDSVRSITNHSTGHLGKIITETLLSAGYEVCLITTKRAL-KP-------EPHPNLSIR--EI---   68 (232)
T ss_dssp             -CCEEEEECSBCEEESSSSEEEEECCCCHHHHHHHHHHHHTTCEEEEEECTTSC-CC-------CCCTTEEEE--EC---
T ss_pred             CCCEEEEeCCCcccccCceeeccCCCCCHHHHHHHHHHHHCCCEEEEEeCCccc-cc-------cCCCCeEEE--EH---
Confidence            5899999999                7889999999999999999999997531 10       001133322  33   


Q ss_pred             HHHHHHHHHHHhHcCCccEEEEccccCCcccc
Q 044010          110 DDCRSLVEETMNHFGRLDHLVNNAGISSVALF  141 (248)
Q Consensus       110 ~~~~~~~~~~~~~~g~id~vv~~ag~~~~~~~  141 (248)
                      ++.+++++.+.+.++++|++|+|||+....+.
T Consensus        69 ~s~~em~~~v~~~~~~~Dili~aAAvsD~~p~  100 (232)
T 2gk4_A           69 TNTKDLLIEMQERVQDYQVLIHSMAVSDYTPV  100 (232)
T ss_dssp             CSHHHHHHHHHHHGGGCSEEEECSBCCSEEEE
T ss_pred             hHHHHHHHHHHHhcCCCCEEEEcCccccccch
Confidence            46677777777888999999999998765544

>3ic5_A Putative saccharopine dehydrogenase; structural genomics, APC63807.2, N-terminal domain, saccharo dehydrogenase, PSI-2; HET: MSE; 2.08A {Ruegeria pomeroyi}

Probab=98.91  E-value=6.2e-09  Score=75.45  Aligned_cols=74  Identities=15%  Similarity=0.161  Sum_probs=60.9

Q ss_pred             CCCEEEEcCCCChHHHHHHHHHHHcC-CeEEEEeCCcchHHHHHHHHHhhCCCcEEEEEccCCCHHHHHHHHHHHHhHcC
Q 044010           46 SGKVVIITGASSGIGEHLAYEYARRG-ACLALCARREKSLEEVADTAREIGSPDVITIRADVSKVDDCRSLVEETMNHFG  124 (248)
Q Consensus        46 ~~k~~lVtGg~~gIG~aia~~l~~~G-~~V~l~~r~~~~~~~~~~~l~~~~~~~v~~~~~D~~~~~~~~~~~~~~~~~~g  124 (248)
                      .+++++|+|+ |++|.++++.|.++| ++|++++|++++.+...    .   ..+..+.+|+++.+++.++++       
T Consensus         4 ~~~~v~I~G~-G~iG~~~~~~l~~~g~~~v~~~~r~~~~~~~~~----~---~~~~~~~~d~~~~~~~~~~~~-------   68 (118)
T 3ic5_A            4 MRWNICVVGA-GKIGQMIAALLKTSSNYSVTVADHDLAALAVLN----R---MGVATKQVDAKDEAGLAKALG-------   68 (118)
T ss_dssp             TCEEEEEECC-SHHHHHHHHHHHHCSSEEEEEEESCHHHHHHHH----T---TTCEEEECCTTCHHHHHHHTT-------
T ss_pred             CcCeEEEECC-CHHHHHHHHHHHhCCCceEEEEeCCHHHHHHHH----h---CCCcEEEecCCCHHHHHHHHc-------
Confidence            4578999999 999999999999999 89999999886655433    1   246678999999887776653       


Q ss_pred             CccEEEEccc
Q 044010          125 RLDHLVNNAG  134 (248)
Q Consensus       125 ~id~vv~~ag  134 (248)
                      ++|++|++++
T Consensus        69 ~~d~vi~~~~   78 (118)
T 3ic5_A           69 GFDAVISAAP   78 (118)
T ss_dssp             TCSEEEECSC
T ss_pred             CCCEEEECCC
Confidence            7999999985

>4ina_A Saccharopine dehydrogenase; structural genomics, PSI-biology, northeast structural genom consortium, NESG, oxidoreductas; 2.49A {Wolinella succinogenes}

Probab=98.88  E-value=1.2e-08  Score=90.43  Aligned_cols=83  Identities=20%  Similarity=0.298  Sum_probs=72.2

Q ss_pred             CEEEEcCCCChHHHHHHHHHHHcC---CeEEEEeCCcchHHHHHHHHHhhCCCcEEEEEccCCCHHHHHHHHHHHHhHcC
Q 044010           48 KVVIITGASSGIGEHLAYEYARRG---ACLALCARREKSLEEVADTAREIGSPDVITIRADVSKVDDCRSLVEETMNHFG  124 (248)
Q Consensus        48 k~~lVtGg~~gIG~aia~~l~~~G---~~V~l~~r~~~~~~~~~~~l~~~~~~~v~~~~~D~~~~~~~~~~~~~~~~~~g  124 (248)
                      ++++|+|+ |+||+++++.|+++|   .+|++.+|+.+++++..+++...++.++..+.+|++|.+++++++++.     
T Consensus         2 ~kVlIiGa-GgiG~~ia~~L~~~g~~~~~V~v~~r~~~~~~~la~~l~~~~~~~~~~~~~D~~d~~~l~~~l~~~-----   75 (405)
T 4ina_A            2 AKVLQIGA-GGVGGVVAHKMAMNREVFSHITLASRTLSKCQEIAQSIKAKGYGEIDITTVDADSIEELVALINEV-----   75 (405)
T ss_dssp             CEEEEECC-SHHHHHHHHHHHTCTTTCCEEEEEESCHHHHHHHHHHHHHTTCCCCEEEECCTTCHHHHHHHHHHH-----
T ss_pred             CEEEEECC-CHHHHHHHHHHHhCCCCceEEEEEECCHHHHHHHHHHhhhhcCCceEEEEecCCCHHHHHHHHHhh-----
Confidence            47889998 899999999999998   499999999999998888887654446888999999999999998865     


Q ss_pred             CccEEEEccccC
Q 044010          125 RLDHLVNNAGIS  136 (248)
Q Consensus       125 ~id~vv~~ag~~  136 (248)
                      ++|+|||++|..
T Consensus        76 ~~DvVin~ag~~   87 (405)
T 4ina_A           76 KPQIVLNIALPY   87 (405)
T ss_dssp             CCSEEEECSCGG
T ss_pred             CCCEEEECCCcc
Confidence            699999999853

>3gxh_A Putative phosphatase (DUF442); YP_001181608.1, structural GE joint center for structural genomics, JCSG; HET: MSE; 1.40A {Shewanella putrefaciens cn-32} PDB: 3gxg_A*

Probab=98.82  E-value=4e-09  Score=81.37  Aligned_cols=78  Identities=17%  Similarity=0.167  Sum_probs=64.0

Q ss_pred             ChHHHHHHHHHHHcCCeEEEEeCCcchHH---HHHHHHHhhCCCcEEEEEccCCCH--HHHHHHHHHHHhHcCCccEEEE
Q 044010           57 SGIGEHLAYEYARRGACLALCARREKSLE---EVADTAREIGSPDVITIRADVSKV--DDCRSLVEETMNHFGRLDHLVN  131 (248)
Q Consensus        57 ~gIG~aia~~l~~~G~~V~l~~r~~~~~~---~~~~~l~~~~~~~v~~~~~D~~~~--~~~~~~~~~~~~~~g~id~vv~  131 (248)
                      +-++.++++.|+++|++|++..|+..+.+   +..+.+++.+. ++..+.+|+++.  ++++++++.+.+.+|+ |++||
T Consensus        26 ~~p~~a~a~~La~~Ga~vvi~~r~~~e~~~~~~~~~~~~~~G~-~~~~i~~Dv~~~~~~~v~~~~~~i~~~~G~-dVLVn  103 (157)
T 3gxh_A           26 GLPNEQQFSLLKQAGVDVVINLMPDSSKDAHPDEGKLVTQAGM-DYVYIPVDWQNPKVEDVEAFFAAMDQHKGK-DVLVH  103 (157)
T ss_dssp             BCCCHHHHHHHHHTTCCEEEECSCTTSTTSCTTHHHHHHHTTC-EEEECCCCTTSCCHHHHHHHHHHHHHTTTS-CEEEE
T ss_pred             CCCCHHHHHHHHHcCCCEEEECCCcccccccccHHHHHHHcCC-eEEEecCCCCCCCHHHHHHHHHHHHhcCCC-CEEEE
Confidence            45789999999999999999988765432   23445555554 778889999999  9999999999988999 99999


Q ss_pred             ccccC
Q 044010          132 NAGIS  136 (248)
Q Consensus       132 ~ag~~  136 (248)
                      |||..
T Consensus       104 nAgg~  108 (157)
T 3gxh_A          104 CLANY  108 (157)
T ss_dssp             CSBSH
T ss_pred             CCCCC
Confidence            99974

>1ff9_A Saccharopine reductase; lysine biosynthesis, alpha-aminoadipate pathway, dehydrogenase, oxidoreductase; 2.00A {Magnaporthe grisea} SCOP: c.2.1.3 d.81.1.2 PDB: 1e5l_A* 1e5q_A

Probab=98.67  E-value=3e-08  Score=89.08  Aligned_cols=79  Identities=15%  Similarity=0.133  Sum_probs=62.1

Q ss_pred             CCCCEEEEcCCCChHHHHHHHHHHHcCCeEEEEeCCcchHHHHHHHHHhhCCCcEEEEEccCCCHHHHHHHHHHHHhHcC
Q 044010           45 VSGKVVIITGASSGIGEHLAYEYARRGACLALCARREKSLEEVADTAREIGSPDVITIRADVSKVDDCRSLVEETMNHFG  124 (248)
Q Consensus        45 ~~~k~~lVtGg~~gIG~aia~~l~~~G~~V~l~~r~~~~~~~~~~~l~~~~~~~v~~~~~D~~~~~~~~~~~~~~~~~~g  124 (248)
                      |++|+++|+| +|++|+++++.|+++|++|++.+|+.++.++..+    ..+ .+..+.+|++|.+++.++++       
T Consensus         1 M~~k~VlViG-aG~iG~~ia~~L~~~G~~V~v~~R~~~~a~~la~----~~~-~~~~~~~Dv~d~~~l~~~l~-------   67 (450)
T 1ff9_A            1 MATKSVLMLG-SGFVTRPTLDVLTDSGIKVTVACRTLESAKKLSA----GVQ-HSTPISLDVNDDAALDAEVA-------   67 (450)
T ss_dssp             -CCCEEEEEC-CSTTHHHHHHHHHTTTCEEEEEESSHHHHHHTTT----TCT-TEEEEECCTTCHHHHHHHHT-------
T ss_pred             CCCCEEEEEC-CCHHHHHHHHHHHhCcCEEEEEECCHHHHHHHHH----hcC-CceEEEeecCCHHHHHHHHc-------
Confidence            4678999997 7999999999999999999999998765544322    222 46788999999988877663       


Q ss_pred             CccEEEEccccC
Q 044010          125 RLDHLVNNAGIS  136 (248)
Q Consensus       125 ~id~vv~~ag~~  136 (248)
                      ++|+|||+++..
T Consensus        68 ~~DvVIn~a~~~   79 (450)
T 1ff9_A           68 KHDLVISLIPYT   79 (450)
T ss_dssp             TSSEEEECCC--
T ss_pred             CCcEEEECCccc
Confidence            699999999864

>1nvt_A Shikimate 5'-dehydrogenase; structural genomics, PSI, protein structure initiative; HET: NAP; 2.35A {Methanocaldococcus jannaschii} SCOP: c.2.1.7 c.58.1.5

Probab=98.66  E-value=8.7e-09  Score=87.21  Aligned_cols=81  Identities=21%  Similarity=0.285  Sum_probs=61.7

Q ss_pred             CCCCCEEEEcCCCChHHHHHHHHHHHcCCeEEEEeCCcchHHHHHHHHHhhCCCcEEEEEccCCCHHHHHHHHHHHHhHc
Q 044010           44 DVSGKVVIITGASSGIGEHLAYEYARRGACLALCARREKSLEEVADTAREIGSPDVITIRADVSKVDDCRSLVEETMNHF  123 (248)
Q Consensus        44 ~~~~k~~lVtGg~~gIG~aia~~l~~~G~~V~l~~r~~~~~~~~~~~l~~~~~~~v~~~~~D~~~~~~~~~~~~~~~~~~  123 (248)
                      ++++|+++|||++ |+|+++++.|+++| +|++.+|+.++.++..+++...+.... .+.+|+++.          .+.+
T Consensus       125 ~l~~k~vlV~GaG-giG~aia~~L~~~G-~V~v~~r~~~~~~~l~~~~~~~~~~~~-~~~~d~~~~----------~~~~  191 (287)
T 1nvt_A          125 RVKDKNIVIYGAG-GAARAVAFELAKDN-NIIIANRTVEKAEALAKEIAEKLNKKF-GEEVKFSGL----------DVDL  191 (287)
T ss_dssp             CCCSCEEEEECCS-HHHHHHHHHHTSSS-EEEEECSSHHHHHHHHHHHHHHHTCCH-HHHEEEECT----------TCCC
T ss_pred             CcCCCEEEEECch-HHHHHHHHHHHHCC-CEEEEECCHHHHHHHHHHHhhhccccc-ceeEEEeeH----------HHhh
Confidence            6889999999997 99999999999999 999999998888888777654321010 122344442          3456


Q ss_pred             CCccEEEEccccCC
Q 044010          124 GRLDHLVNNAGISS  137 (248)
Q Consensus       124 g~id~vv~~ag~~~  137 (248)
                      +++|++|||+|...
T Consensus       192 ~~~DilVn~ag~~~  205 (287)
T 1nvt_A          192 DGVDIIINATPIGM  205 (287)
T ss_dssp             TTCCEEEECSCTTC
T ss_pred             CCCCEEEECCCCCC
Confidence            78999999999764

>1v3u_A Leukotriene B4 12- hydroxydehydrogenase/prostaglandin 15-keto reductase; rossmann fold, riken structural genomics/proteomics initiative, RSGI; 2.00A {Cavia porcellus} SCOP: b.35.1.2 c.2.1.1 PDB: 1v3t_A 1v3v_A* 2dm6_A* 1zsv_A 2y05_A*

Probab=98.60  E-value=6.5e-08  Score=83.25  Aligned_cols=79  Identities=16%  Similarity=0.294  Sum_probs=60.9

Q ss_pred             CCCEEEEcCCCChHHHHHHHHHHHcCCeEEEEeCCcchHHHHHHHHHhhCCCcEEEEEccCCCHHHHHHHHHHHHhHcCC
Q 044010           46 SGKVVIITGASSGIGEHLAYEYARRGACLALCARREKSLEEVADTAREIGSPDVITIRADVSKVDDCRSLVEETMNHFGR  125 (248)
Q Consensus        46 ~~k~~lVtGg~~gIG~aia~~l~~~G~~V~l~~r~~~~~~~~~~~l~~~~~~~v~~~~~D~~~~~~~~~~~~~~~~~~g~  125 (248)
                      +|++++|||++||||.++++.+...|++|+++++++++.+.+ ++   .+. .   ..+|.++.+++.+.+.++..  +.
T Consensus       145 ~g~~vlV~Ga~ggiG~~~~~~~~~~G~~V~~~~~~~~~~~~~-~~---~g~-~---~~~d~~~~~~~~~~~~~~~~--~~  214 (333)
T 1v3u_A          145 GGETVLVSAAAGAVGSVVGQIAKLKGCKVVGAAGSDEKIAYL-KQ---IGF-D---AAFNYKTVNSLEEALKKASP--DG  214 (333)
T ss_dssp             SSCEEEEESTTBHHHHHHHHHHHHTTCEEEEEESSHHHHHHH-HH---TTC-S---EEEETTSCSCHHHHHHHHCT--TC
T ss_pred             CCCEEEEecCCCcHHHHHHHHHHHCCCEEEEEeCCHHHHHHH-Hh---cCC-c---EEEecCCHHHHHHHHHHHhC--CC
Confidence            689999999999999999999999999999999987665544 22   232 2   33588875556666655433  58


Q ss_pred             ccEEEEccc
Q 044010          126 LDHLVNNAG  134 (248)
Q Consensus       126 id~vv~~ag  134 (248)
                      +|++|+|+|
T Consensus       215 ~d~vi~~~g  223 (333)
T 1v3u_A          215 YDCYFDNVG  223 (333)
T ss_dssp             EEEEEESSC
T ss_pred             CeEEEECCC
Confidence            999999998

>1pqw_A Polyketide synthase; rossmann fold, dimer, structural genomics, PSI, protein STRU initiative; 2.66A {Mycobacterium tuberculosis} SCOP: c.2.1.1

Probab=98.60  E-value=1.1e-07  Score=75.48  Aligned_cols=103  Identities=21%  Similarity=0.238  Sum_probs=70.4

Q ss_pred             CCCEEEEcCCCChHHHHHHHHHHHcCCeEEEEeCCcchHHHHHHHHHhhCCCcEEEEEccCCCHHHHHHHHHHHHhHcCC
Q 044010           46 SGKVVIITGASSGIGEHLAYEYARRGACLALCARREKSLEEVADTAREIGSPDVITIRADVSKVDDCRSLVEETMNHFGR  125 (248)
Q Consensus        46 ~~k~~lVtGg~~gIG~aia~~l~~~G~~V~l~~r~~~~~~~~~~~l~~~~~~~v~~~~~D~~~~~~~~~~~~~~~~~~g~  125 (248)
                      +|++++|+||+||||.++++.+...|++|++++|++++.+..    ++.+. .   ..+|.++.+..+.+.+.. . .++
T Consensus        38 ~g~~vlV~Ga~ggiG~~~~~~~~~~G~~V~~~~~~~~~~~~~----~~~g~-~---~~~d~~~~~~~~~~~~~~-~-~~~  107 (198)
T 1pqw_A           38 PGERVLIHSATGGVGMAAVSIAKMIGARIYTTAGSDAKREML----SRLGV-E---YVGDSRSVDFADEILELT-D-GYG  107 (198)
T ss_dssp             TTCEEEETTTTSHHHHHHHHHHHHHTCEEEEEESSHHHHHHH----HTTCC-S---EEEETTCSTHHHHHHHHT-T-TCC
T ss_pred             CCCEEEEeeCCChHHHHHHHHHHHcCCEEEEEeCCHHHHHHH----HHcCC-C---EEeeCCcHHHHHHHHHHh-C-CCC
Confidence            689999999999999999999999999999999987654432    33332 2   235777765444443322 1 136


Q ss_pred             ccEEEEccccCCcccccccCChHHHHHHHHhhhHHHHHHHHHHhhhhhhcCCeEEEEcCcc
Q 044010          126 LDHLVNNAGISSVALFEDIVNITDFKQIMNINFWGSVYTTRFAVPHLRYTKGKIVVLSSAA  186 (248)
Q Consensus       126 id~vv~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~g~iV~isS~~  186 (248)
                      +|++|+|+|.            +.               .+...+.++ .+|++|.+++..
T Consensus       108 ~D~vi~~~g~------------~~---------------~~~~~~~l~-~~G~~v~~g~~~  140 (198)
T 1pqw_A          108 VDVVLNSLAG------------EA---------------IQRGVQILA-PGGRFIELGKKD  140 (198)
T ss_dssp             EEEEEECCCT------------HH---------------HHHHHHTEE-EEEEEEECSCGG
T ss_pred             CeEEEECCch------------HH---------------HHHHHHHhc-cCCEEEEEcCCC
Confidence            9999999872            10               233344454 568999998754

>2eez_A Alanine dehydrogenase; TTHA0216, structural genomic NPPSFA, national project on protein structural and function analyses; 2.71A {Thermus thermophilus}

Probab=98.60  E-value=8.7e-08  Score=83.92  Aligned_cols=108  Identities=17%  Similarity=0.176  Sum_probs=73.8

Q ss_pred             CCCCCEEEEcCCCChHHHHHHHHHHHcCCeEEEEeCCcchHHHHHHHHHhhCCCcEEEEEccCCCHHHHHHHHHHHHhHc
Q 044010           44 DVSGKVVIITGASSGIGEHLAYEYARRGACLALCARREKSLEEVADTAREIGSPDVITIRADVSKVDDCRSLVEETMNHF  123 (248)
Q Consensus        44 ~~~~k~~lVtGg~~gIG~aia~~l~~~G~~V~l~~r~~~~~~~~~~~l~~~~~~~v~~~~~D~~~~~~~~~~~~~~~~~~  123 (248)
                      ++++++++|+|+ |+||+++++.+...|++|++.+|++++.+...+.+    +..   +.+|.++.+++++++.      
T Consensus       163 ~l~~~~V~ViGa-G~iG~~~a~~l~~~Ga~V~~~d~~~~~~~~~~~~~----g~~---~~~~~~~~~~l~~~~~------  228 (369)
T 2eez_A          163 GVAPASVVILGG-GTVGTNAAKIALGMGAQVTILDVNHKRLQYLDDVF----GGR---VITLTATEANIKKSVQ------  228 (369)
T ss_dssp             BBCCCEEEEECC-SHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHT----TTS---EEEEECCHHHHHHHHH------
T ss_pred             CCCCCEEEEECC-CHHHHHHHHHHHhCCCEEEEEECCHHHHHHHHHhc----Cce---EEEecCCHHHHHHHHh------
Confidence            578999999999 99999999999999999999999987655443322    223   4567778877766653      


Q ss_pred             CCccEEEEccccCCcccccccCChHHHHHHHHhhhHHHHHHHHHHhhhhhhcCCeEEEEcCccc
Q 044010          124 GRLDHLVNNAGISSVALFEDIVNITDFKQIMNINFWGSVYTTRFAVPHLRYTKGKIVVLSSAAS  187 (248)
Q Consensus       124 g~id~vv~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~g~iV~isS~~~  187 (248)
                       +.|++|++++......                    +..+.+..++.|+ .+|.||++++..+
T Consensus       229 -~~DvVi~~~g~~~~~~--------------------~~li~~~~l~~mk-~gg~iV~v~~~~g  270 (369)
T 2eez_A          229 -HADLLIGAVLVPGAKA--------------------PKLVTRDMLSLMK-EGAVIVDVAVDQG  270 (369)
T ss_dssp             -HCSEEEECCC---------------------------CCSCHHHHTTSC-TTCEEEECC----
T ss_pred             -CCCEEEECCCCCcccc--------------------chhHHHHHHHhhc-CCCEEEEEecCCC
Confidence             5899999998643110                    0122345556665 5689999987653

>2hcy_A Alcohol dehydrogenase 1; tetramer of asymmetric dimers, zinc coordination, intramolec disulfide bonds, oxidoreductase; HET: 8ID; 2.44A {Saccharomyces cerevisiae}

Probab=98.59  E-value=1.6e-07  Score=81.39  Aligned_cols=105  Identities=21%  Similarity=0.235  Sum_probs=75.8

Q ss_pred             CCCCEEEEcCCCChHHHHHHHHHHHcCCeEEEEeCCcchHHHHHHHHHhhCCCcEEEEEccCCCHHHHHHHHHHHHhHcC
Q 044010           45 VSGKVVIITGASSGIGEHLAYEYARRGACLALCARREKSLEEVADTAREIGSPDVITIRADVSKVDDCRSLVEETMNHFG  124 (248)
Q Consensus        45 ~~~k~~lVtGg~~gIG~aia~~l~~~G~~V~l~~r~~~~~~~~~~~l~~~~~~~v~~~~~D~~~~~~~~~~~~~~~~~~g  124 (248)
                      -+|+++||+|++||||.++++.+...|++|++++|++++.+..    ++.+. .   ..+|.++.+++.+.+.++.+.  
T Consensus       168 ~~g~~vlV~Ga~ggiG~~~~~~a~~~Ga~V~~~~~~~~~~~~~----~~~g~-~---~~~d~~~~~~~~~~~~~~~~~--  237 (347)
T 2hcy_A          168 MAGHWVAISGAAGGLGSLAVQYAKAMGYRVLGIDGGEGKEELF----RSIGG-E---VFIDFTKEKDIVGAVLKATDG--  237 (347)
T ss_dssp             CTTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEECSTTHHHHH----HHTTC-C---EEEETTTCSCHHHHHHHHHTS--
T ss_pred             CCCCEEEEECCCchHHHHHHHHHHHCCCcEEEEcCCHHHHHHH----HHcCC-c---eEEecCccHhHHHHHHHHhCC--
Confidence            3689999999999999999999999999999999988765432    22332 2   235888666677776665443  


Q ss_pred             CccEEEEccccCCcccccccCChHHHHHHHHhhhHHHHHHHHHHhhhhhhcCCeEEEEcCcc
Q 044010          125 RLDHLVNNAGISSVALFEDIVNITDFKQIMNINFWGSVYTTRFAVPHLRYTKGKIVVLSSAA  186 (248)
Q Consensus       125 ~id~vv~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~g~iV~isS~~  186 (248)
                      .+|++|+++|..           +               ..+..++.++ .+|++|.+++..
T Consensus       238 ~~D~vi~~~g~~-----------~---------------~~~~~~~~l~-~~G~iv~~g~~~  272 (347)
T 2hcy_A          238 GAHGVINVSVSE-----------A---------------AIEASTRYVR-ANGTTVLVGMPA  272 (347)
T ss_dssp             CEEEEEECSSCH-----------H---------------HHHHHTTSEE-EEEEEEECCCCT
T ss_pred             CCCEEEECCCcH-----------H---------------HHHHHHHHHh-cCCEEEEEeCCC
Confidence            799999999831           1               2344555554 568999987654

>3tnl_A Shikimate dehydrogenase; structural genomics, center for structural genomics of infec diseases, csgid; HET: NAD SKM; 1.45A {Listeria monocytogenes} PDB: 3toz_A*

Probab=98.59  E-value=4.2e-07  Score=77.76  Aligned_cols=84  Identities=18%  Similarity=0.272  Sum_probs=65.8

Q ss_pred             cCCCCCEEEEcCCCChHHHHHHHHHHHcCC-eEEEEeCC---cchHHHHHHHHHhhCCCcEEEEEccCCCHHHHHHHHHH
Q 044010           43 EDVSGKVVIITGASSGIGEHLAYEYARRGA-CLALCARR---EKSLEEVADTAREIGSPDVITIRADVSKVDDCRSLVEE  118 (248)
Q Consensus        43 ~~~~~k~~lVtGg~~gIG~aia~~l~~~G~-~V~l~~r~---~~~~~~~~~~l~~~~~~~v~~~~~D~~~~~~~~~~~~~  118 (248)
                      .+++||+++|+|+ ||+|++++..|+++|+ +|.+++|+   .++.++..+++.+..+..+  ...++.+.+++.+.+. 
T Consensus       150 ~~l~gk~~lVlGa-GG~g~aia~~L~~~Ga~~V~i~nR~~~~~~~a~~la~~~~~~~~~~~--~~~~~~~~~~l~~~l~-  225 (315)
T 3tnl_A          150 HDIIGKKMTICGA-GGAATAICIQAALDGVKEISIFNRKDDFYANAEKTVEKINSKTDCKA--QLFDIEDHEQLRKEIA-  225 (315)
T ss_dssp             CCCTTSEEEEECC-SHHHHHHHHHHHHTTCSEEEEEECSSTTHHHHHHHHHHHHHHSSCEE--EEEETTCHHHHHHHHH-
T ss_pred             CCccCCEEEEECC-ChHHHHHHHHHHHCCCCEEEEEECCCchHHHHHHHHHHhhhhcCCce--EEeccchHHHHHhhhc-
Confidence            4689999999997 7999999999999999 89999999   7778888888776654333  3456666655544433 


Q ss_pred             HHhHcCCccEEEEccccC
Q 044010          119 TMNHFGRLDHLVNNAGIS  136 (248)
Q Consensus       119 ~~~~~g~id~vv~~ag~~  136 (248)
                            ..|++||+.+..
T Consensus       226 ------~aDiIINaTp~G  237 (315)
T 3tnl_A          226 ------ESVIFTNATGVG  237 (315)
T ss_dssp             ------TCSEEEECSSTT
T ss_pred             ------CCCEEEECccCC
Confidence                  699999998754

>3ond_A Adenosylhomocysteinase; plant protein, enzyme-substrate complex, NAD cofactor, regul SAM-dependent methylation reactions; HET: NAD ADN; 1.17A {Lupinus luteus} PDB: 3one_A* 3onf_A*

Probab=98.56  E-value=2.6e-10  Score=102.37  Aligned_cols=45  Identities=18%  Similarity=0.263  Sum_probs=39.4

Q ss_pred             cCCCCCEEEEcCCCChHHHHHHHHHHHcCCeEEEEeCCcchHHHHH
Q 044010           43 EDVSGKVVIITGASSGIGEHLAYEYARRGACLALCARREKSLEEVA   88 (248)
Q Consensus        43 ~~~~~k~~lVtGg~~gIG~aia~~l~~~G~~V~l~~r~~~~~~~~~   88 (248)
                      .+++||+++|||++ +||+++|+.|+..|++|+++++++.+.+...
T Consensus       261 ~~L~GKtVvVtGaG-gIG~aiA~~Laa~GA~Viv~D~~~~~a~~Aa  305 (488)
T 3ond_A          261 VMIAGKVAVVAGYG-DVGKGCAAALKQAGARVIVTEIDPICALQAT  305 (488)
T ss_dssp             CCCTTCEEEEECCS-HHHHHHHHHHHHTTCEEEEECSCHHHHHHHH
T ss_pred             CcccCCEEEEECCC-HHHHHHHHHHHHCCCEEEEEcCCHHHHHHHH
Confidence            46899999999987 9999999999999999999999876655443

>2axq_A Saccharopine dehydrogenase; rossmann fold variant, saccharopine reductase fold (domain II), alpha/beta protein; 1.70A {Saccharomyces cerevisiae}

Probab=98.50  E-value=2.5e-07  Score=83.37  Aligned_cols=81  Identities=14%  Similarity=0.163  Sum_probs=62.5

Q ss_pred             ccCCCCCEEEEcCCCChHHHHHHHHHHHc-CCeEEEEeCCcchHHHHHHHHHhhCCCcEEEEEccCCCHHHHHHHHHHHH
Q 044010           42 SEDVSGKVVIITGASSGIGEHLAYEYARR-GACLALCARREKSLEEVADTAREIGSPDVITIRADVSKVDDCRSLVEETM  120 (248)
Q Consensus        42 ~~~~~~k~~lVtGg~~gIG~aia~~l~~~-G~~V~l~~r~~~~~~~~~~~l~~~~~~~v~~~~~D~~~~~~~~~~~~~~~  120 (248)
                      ..++++++++|+|+ ||+|+++++.|+++ |++|.+.+|+.+++++..+.    .  .+..+.+|++|.+++.++++   
T Consensus        18 ~~~l~~k~VlIiGA-GgiG~aia~~L~~~~g~~V~v~~R~~~ka~~la~~----~--~~~~~~~D~~d~~~l~~~l~---   87 (467)
T 2axq_A           18 EGRHMGKNVLLLGS-GFVAQPVIDTLAANDDINVTVACRTLANAQALAKP----S--GSKAISLDVTDDSALDKVLA---   87 (467)
T ss_dssp             -----CEEEEEECC-STTHHHHHHHHHTSTTEEEEEEESSHHHHHHHHGG----G--TCEEEECCTTCHHHHHHHHH---
T ss_pred             ccCCCCCEEEEECC-hHHHHHHHHHHHhCCCCeEEEEECCHHHHHHHHHh----c--CCcEEEEecCCHHHHHHHHc---
Confidence            45788999999997 99999999999998 77999999998766654432    1  35667899999988777664   


Q ss_pred             hHcCCccEEEEccccC
Q 044010          121 NHFGRLDHLVNNAGIS  136 (248)
Q Consensus       121 ~~~g~id~vv~~ag~~  136 (248)
                          ++|+|||+++..
T Consensus        88 ----~~DvVIn~tp~~   99 (467)
T 2axq_A           88 ----DNDVVISLIPYT   99 (467)
T ss_dssp             ----TSSEEEECSCGG
T ss_pred             ----CCCEEEECCchh
Confidence                699999999864

>2o7s_A DHQ-SDH PR, bifunctional 3-dehydroquinate dehydratase/shikima dehydrogenase; shikimate, NADPH, dehydroshikimate, bifunctional enzyme; HET: DHK TLA NAP; 1.78A {Arabidopsis thaliana} PDB: 2o7q_A* 2gpt_A*

Probab=98.46  E-value=3.3e-08  Score=90.45  Aligned_cols=99  Identities=17%  Similarity=0.282  Sum_probs=63.7

Q ss_pred             CCCCCEEEEcCCCChHHHHHHHHHHHcCCeEEEEeCCcchHHHHHHHHHhhCCCcEEEEEccCCCHHHHHHHHHHHHhHc
Q 044010           44 DVSGKVVIITGASSGIGEHLAYEYARRGACLALCARREKSLEEVADTAREIGSPDVITIRADVSKVDDCRSLVEETMNHF  123 (248)
Q Consensus        44 ~~~~k~~lVtGg~~gIG~aia~~l~~~G~~V~l~~r~~~~~~~~~~~l~~~~~~~v~~~~~D~~~~~~~~~~~~~~~~~~  123 (248)
                      ++++|+++|||+ ||+|+++++.|+++|++|++++|+.++.++..+++.    .++.    ++.+   ++++      ..
T Consensus       361 ~l~~k~vlV~Ga-GGig~aia~~L~~~G~~V~i~~R~~~~a~~la~~~~----~~~~----~~~d---l~~~------~~  422 (523)
T 2o7s_A          361 PLASKTVVVIGA-GGAGKALAYGAKEKGAKVVIANRTYERALELAEAIG----GKAL----SLTD---LDNY------HP  422 (523)
T ss_dssp             -----CEEEECC-SHHHHHHHHHHHHHCC-CEEEESSHHHHHHHHHHTT----C-CE----ETTT---TTTC--------
T ss_pred             ccCCCEEEEECC-cHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHcC----Ccee----eHHH---hhhc------cc
Confidence            578999999999 599999999999999999999999887776665541    1221    2222   1000      12


Q ss_pred             CCccEEEEccccCCc-----ccccccCChHHHHHHHHhhhHHH
Q 044010          124 GRLDHLVNNAGISSV-----ALFEDIVNITDFKQIMNINFWGS  161 (248)
Q Consensus       124 g~id~vv~~ag~~~~-----~~~~~~~~~~~~~~~~~~n~~~~  161 (248)
                      +.+|++|||+|....     .++.+ .+.+++...+++|+.+.
T Consensus       423 ~~~DilVN~agvg~~~~~~~~~~~~-~~~~~~~~v~Dvny~p~  464 (523)
T 2o7s_A          423 EDGMVLANTTSMGMQPNVEETPISK-DALKHYALVFDAVYTPR  464 (523)
T ss_dssp             CCSEEEEECSSTTCTTCTTCCSSCT-TTGGGEEEEEECCCSSS
T ss_pred             cCceEEEECCCCCCCCCCCCCCCCh-HHcCcCcEEEEEeeCCc
Confidence            358999999997532     22222 34567778888988765

>1nyt_A Shikimate 5-dehydrogenase; alpha/beta domains, WIDE cleft separation, oxidoreductase; HET: NAP; 1.50A {Escherichia coli} SCOP: c.2.1.7 c.58.1.5

Probab=98.44  E-value=3.3e-07  Score=76.82  Aligned_cols=78  Identities=15%  Similarity=0.218  Sum_probs=59.3

Q ss_pred             cCCCCCEEEEcCCCChHHHHHHHHHHHcCCeEEEEeCCcchHHHHHHHHHhhCCCcEEEEEccCCCHHHHHHHHHHHHhH
Q 044010           43 EDVSGKVVIITGASSGIGEHLAYEYARRGACLALCARREKSLEEVADTAREIGSPDVITIRADVSKVDDCRSLVEETMNH  122 (248)
Q Consensus        43 ~~~~~k~~lVtGg~~gIG~aia~~l~~~G~~V~l~~r~~~~~~~~~~~l~~~~~~~v~~~~~D~~~~~~~~~~~~~~~~~  122 (248)
                      .++++|+++|+|+ ||+|+++++.|++.|++|++.+|+.++.++..+++...+  .+.  ..|+   +++       .+ 
T Consensus       115 ~~l~~k~vlViGa-Gg~g~a~a~~L~~~G~~V~v~~R~~~~~~~la~~~~~~~--~~~--~~~~---~~~-------~~-  178 (271)
T 1nyt_A          115 FIRPGLRILLIGA-GGASRGVLLPLLSLDCAVTITNRTVSRAEELAKLFAHTG--SIQ--ALSM---DEL-------EG-  178 (271)
T ss_dssp             CCCTTCEEEEECC-SHHHHHHHHHHHHTTCEEEEECSSHHHHHHHHHHTGGGS--SEE--ECCS---GGG-------TT-
T ss_pred             cCcCCCEEEEECC-cHHHHHHHHHHHHcCCEEEEEECCHHHHHHHHHHhhccC--Cee--EecH---HHh-------cc-
Confidence            3678999999998 799999999999999999999999888877776664322  221  2332   221       11 


Q ss_pred             cCCccEEEEccccCC
Q 044010          123 FGRLDHLVNNAGISS  137 (248)
Q Consensus       123 ~g~id~vv~~ag~~~  137 (248)
                       ++.|++||++|...
T Consensus       179 -~~~DivVn~t~~~~  192 (271)
T 1nyt_A          179 -HEFDLIINATSSGI  192 (271)
T ss_dssp             -CCCSEEEECCSCGG
T ss_pred             -CCCCEEEECCCCCC
Confidence             68999999999754

>3llv_A Exopolyphosphatase-related protein; NAD(P)-binding, rossmann, PSI, M structural genomics; 1.70A {Archaeoglobus fulgidus}

Probab=98.38  E-value=1.4e-06  Score=65.24  Aligned_cols=76  Identities=16%  Similarity=0.184  Sum_probs=58.1

Q ss_pred             CCCCEEEEcCCCChHHHHHHHHHHHcCCeEEEEeCCcchHHHHHHHHHhhCCCcEEEEEccCCCHHHHHHHHHHHHhHcC
Q 044010           45 VSGKVVIITGASSGIGEHLAYEYARRGACLALCARREKSLEEVADTAREIGSPDVITIRADVSKVDDCRSLVEETMNHFG  124 (248)
Q Consensus        45 ~~~k~~lVtGg~~gIG~aia~~l~~~G~~V~l~~r~~~~~~~~~~~l~~~~~~~v~~~~~D~~~~~~~~~~~~~~~~~~g  124 (248)
                      .++++++|+|+ |.+|.++++.|.++|++|+++++++++.+...    +.   ...++.+|.++.+.++++      ...
T Consensus         4 ~~~~~v~I~G~-G~iG~~la~~L~~~g~~V~~id~~~~~~~~~~----~~---~~~~~~gd~~~~~~l~~~------~~~   69 (141)
T 3llv_A            4 NGRYEYIVIGS-EAAGVGLVRELTAAGKKVLAVDKSKEKIELLE----DE---GFDAVIADPTDESFYRSL------DLE   69 (141)
T ss_dssp             --CCSEEEECC-SHHHHHHHHHHHHTTCCEEEEESCHHHHHHHH----HT---TCEEEECCTTCHHHHHHS------CCT
T ss_pred             CCCCEEEEECC-CHHHHHHHHHHHHCCCeEEEEECCHHHHHHHH----HC---CCcEEECCCCCHHHHHhC------Ccc
Confidence            34578999998 77999999999999999999999886655433    22   356788999999876654      224


Q ss_pred             CccEEEEccc
Q 044010          125 RLDHLVNNAG  134 (248)
Q Consensus       125 ~id~vv~~ag  134 (248)
                      +.|.+|.+.+
T Consensus        70 ~~d~vi~~~~   79 (141)
T 3llv_A           70 GVSAVLITGS   79 (141)
T ss_dssp             TCSEEEECCS
T ss_pred             cCCEEEEecC
Confidence            7899988765

>2hmt_A YUAA protein; RCK, KTN, KTR, KTRA, ktrab, membrane protein, ION transporter, symporter, transport protein; HET: NAI; 2.20A {Bacillus subtilis} SCOP: c.2.1.9 PDB: 2hms_A* 2hmu_A* 2hmv_A* 2hmw_A* 1lsu_A*

Probab=98.35  E-value=4.6e-07  Score=67.69  Aligned_cols=78  Identities=14%  Similarity=0.213  Sum_probs=56.5

Q ss_pred             CCCCCEEEEcCCCChHHHHHHHHHHHcCCeEEEEeCCcchHHHHHHHHHhhCCCcEEEEEccCCCHHHHHHHHHHHHhHc
Q 044010           44 DVSGKVVIITGASSGIGEHLAYEYARRGACLALCARREKSLEEVADTAREIGSPDVITIRADVSKVDDCRSLVEETMNHF  123 (248)
Q Consensus        44 ~~~~k~~lVtGg~~gIG~aia~~l~~~G~~V~l~~r~~~~~~~~~~~l~~~~~~~v~~~~~D~~~~~~~~~~~~~~~~~~  123 (248)
                      ++++++++|+|+ |++|..+++.|.++|++|++++|++++.+.    +++.   ....+.+|.++.+.++++      ..
T Consensus         3 ~~~~~~v~I~G~-G~iG~~~a~~l~~~g~~v~~~d~~~~~~~~----~~~~---~~~~~~~d~~~~~~l~~~------~~   68 (144)
T 2hmt_A            3 RIKNKQFAVIGL-GRFGGSIVKELHRMGHEVLAVDINEEKVNA----YASY---ATHAVIANATEENELLSL------GI   68 (144)
T ss_dssp             ---CCSEEEECC-SHHHHHHHHHHHHTTCCCEEEESCHHHHHT----TTTT---CSEEEECCTTCHHHHHTT------TG
T ss_pred             CCcCCcEEEECC-CHHHHHHHHHHHHCCCEEEEEeCCHHHHHH----HHHh---CCEEEEeCCCCHHHHHhc------CC
Confidence            456788999998 999999999999999999999998654332    2222   235677899887655433      13


Q ss_pred             CCccEEEEcccc
Q 044010          124 GRLDHLVNNAGI  135 (248)
Q Consensus       124 g~id~vv~~ag~  135 (248)
                      ++.|++|++++.
T Consensus        69 ~~~d~vi~~~~~   80 (144)
T 2hmt_A           69 RNFEYVIVAIGA   80 (144)
T ss_dssp             GGCSEEEECCCS
T ss_pred             CCCCEEEECCCC
Confidence            479999999864

>1b8p_A Protein (malate dehydrogenase); oxidoreductase; 1.90A {Aquaspirillum arcticum} SCOP: c.2.1.5 d.162.1.1 PDB: 1b8u_A* 1b8v_A* 3d5t_A

Probab=98.34  E-value=4.8e-06  Score=71.68  Aligned_cols=151  Identities=15%  Similarity=0.088  Sum_probs=98.3

Q ss_pred             CCEEEEcCCCChHHHHHHHHHHHcCC-------eEEEEeCC----cchHHHHHHHHHhhCCCcEEEEEccCCCHHHHHHH
Q 044010           47 GKVVIITGASSGIGEHLAYEYARRGA-------CLALCARR----EKSLEEVADTAREIGSPDVITIRADVSKVDDCRSL  115 (248)
Q Consensus        47 ~k~~lVtGg~~gIG~aia~~l~~~G~-------~V~l~~r~----~~~~~~~~~~l~~~~~~~v~~~~~D~~~~~~~~~~  115 (248)
                      ..+++||||+|.+|.+++..|+.+|.       +|++.+++    .++.+.....+..... .+   ..|++..++..++
T Consensus         5 ~~KI~ViGaaG~VG~~l~~~L~~~~~~~~~~~~ev~l~Di~~~~~~~~~~g~~~dl~~~~~-~~---~~~i~~~~~~~~a   80 (329)
T 1b8p_A            5 PMRVAVTGAAGQICYSLLFRIANGDMLGKDQPVILQLLEIPNEKAQKALQGVMMEIDDCAF-PL---LAGMTAHADPMTA   80 (329)
T ss_dssp             CEEEEESSTTSHHHHHHHHHHHTTTTTCTTCCEEEEEECCSCHHHHHHHHHHHHHHHTTTC-TT---EEEEEEESSHHHH
T ss_pred             CCEEEEECCCChHHHHHHHHHHhCCCcCCCCCCEEEEEcCCCccccccchhhHHHHhhhcc-cc---cCcEEEecCcHHH
Confidence            35799999999999999999999885       79999988    5445544445554211 11   1244433344343


Q ss_pred             HHHHHhHcCCccEEEEccccCCcccccccCChHHHHHHHHhhhHHHHHHHHHHhhhhhhcCCeEEEEcCccc--------
Q 044010          116 VEETMNHFGRLDHLVNNAGISSVALFEDIVNITDFKQIMNINFWGSVYTTRFAVPHLRYTKGKIVVLSSAAS--------  187 (248)
Q Consensus       116 ~~~~~~~~g~id~vv~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~g~iV~isS~~~--------  187 (248)
                      +       .+.|++||.||.....   . .+   -.+.+..|+.....+++.+...-. .++++|++|.-..        
T Consensus        81 l-------~~aD~Vi~~ag~~~~~---g-~~---r~dl~~~N~~i~~~i~~~i~~~~~-p~a~ii~~SNPv~~~t~~~~~  145 (329)
T 1b8p_A           81 F-------KDADVALLVGARPRGP---G-ME---RKDLLEANAQIFTVQGKAIDAVAS-RNIKVLVVGNPANTNAYIAMK  145 (329)
T ss_dssp             T-------TTCSEEEECCCCCCCT---T-CC---HHHHHHHHHHHHHHHHHHHHHHSC-TTCEEEECSSSHHHHHHHHHH
T ss_pred             h-------CCCCEEEEeCCCCCCC---C-CC---HHHHHHHHHHHHHHHHHHHHHhcC-CCeEEEEccCchHHHHHHHHH
Confidence            3       3799999999975421   1 12   234677888888888877765420 2468898886332        


Q ss_pred             cc-cCCCCccchHHHHHHHHHHHHHHHHhC
Q 044010          188 WL-TAPRMSFYNASKAALVLFFETLRVELG  216 (248)
Q Consensus       188 ~~-~~~~~~~Y~~sKaal~~l~~~la~~~~  216 (248)
                      .. +.|....++.++.--..+...++..++
T Consensus       146 ~~~~~p~~~v~g~t~Ld~~r~~~~la~~lg  175 (329)
T 1b8p_A          146 SAPSLPAKNFTAMLRLDHNRALSQIAAKTG  175 (329)
T ss_dssp             TCTTSCGGGEEECCHHHHHHHHHHHHHHHT
T ss_pred             HcCCCCHHHEEEeecHHHHHHHHHHHHHhC
Confidence            11 223334588887656777788888875

>2j3h_A NADP-dependent oxidoreductase P1; double bond reductase (AT5G16970), APO form; 2.5A {Arabidopsis thaliana} PDB: 2j3i_A* 2j3j_A* 2j3k_A*

Probab=98.31  E-value=6.7e-07  Score=77.20  Aligned_cols=80  Identities=16%  Similarity=0.257  Sum_probs=59.1

Q ss_pred             CCCEEEEcCCCChHHHHHHHHHHHcCCeEEEEeCCcchHHHHHHHHHhhCCCcEEEEEccCCCHHHHHHHHHHHHhHcCC
Q 044010           46 SGKVVIITGASSGIGEHLAYEYARRGACLALCARREKSLEEVADTAREIGSPDVITIRADVSKVDDCRSLVEETMNHFGR  125 (248)
Q Consensus        46 ~~k~~lVtGg~~gIG~aia~~l~~~G~~V~l~~r~~~~~~~~~~~l~~~~~~~v~~~~~D~~~~~~~~~~~~~~~~~~g~  125 (248)
                      +|++++|+|++|++|.++++.+...|++|+++++++++.+.+.+   +.+. .   ..+|.++.+++.+.+.++..  ++
T Consensus       155 ~g~~vlI~Ga~g~iG~~~~~~a~~~G~~V~~~~~~~~~~~~~~~---~~g~-~---~~~d~~~~~~~~~~~~~~~~--~~  225 (345)
T 2j3h_A          155 EGETVYVSAASGAVGQLVGQLAKMMGCYVVGSAGSKEKVDLLKT---KFGF-D---DAFNYKEESDLTAALKRCFP--NG  225 (345)
T ss_dssp             TTCEEEESSTTSHHHHHHHHHHHHTTCEEEEEESSHHHHHHHHH---TSCC-S---EEEETTSCSCSHHHHHHHCT--TC
T ss_pred             CCCEEEEECCCcHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHH---HcCC-c---eEEecCCHHHHHHHHHHHhC--CC
Confidence            68999999999999999999999999999999998766554332   2232 2   23477765555555554432  47


Q ss_pred             ccEEEEccc
Q 044010          126 LDHLVNNAG  134 (248)
Q Consensus       126 id~vv~~ag  134 (248)
                      +|++|+|+|
T Consensus       226 ~d~vi~~~g  234 (345)
T 2j3h_A          226 IDIYFENVG  234 (345)
T ss_dssp             EEEEEESSC
T ss_pred             CcEEEECCC
Confidence            999999987

>1qor_A Quinone oxidoreductase; HET: NAP; 2.20A {Escherichia coli} SCOP: b.35.1.2 c.2.1.1

Probab=98.31  E-value=1.4e-06  Score=74.68  Aligned_cols=79  Identities=15%  Similarity=0.083  Sum_probs=57.8

Q ss_pred             CCCEEEEcCCCChHHHHHHHHHHHcCCeEEEEeCCcchHHHHHHHHHhhCCCcEEEEEccCCCHHHHHHHHHHHHhHcCC
Q 044010           46 SGKVVIITGASSGIGEHLAYEYARRGACLALCARREKSLEEVADTAREIGSPDVITIRADVSKVDDCRSLVEETMNHFGR  125 (248)
Q Consensus        46 ~~k~~lVtGg~~gIG~aia~~l~~~G~~V~l~~r~~~~~~~~~~~l~~~~~~~v~~~~~D~~~~~~~~~~~~~~~~~~g~  125 (248)
                      .|++++|+||+||||.++++.+...|++|++++|++++.+.+.+    .+. .   ..+|.++.+..+++.+...  ...
T Consensus       140 ~g~~vlV~Ga~ggiG~~~~~~a~~~G~~V~~~~~~~~~~~~~~~----~g~-~---~~~~~~~~~~~~~~~~~~~--~~~  209 (327)
T 1qor_A          140 PDEQFLFHAAAGGVGLIACQWAKALGAKLIGTVGTAQKAQSALK----AGA-W---QVINYREEDLVERLKEITG--GKK  209 (327)
T ss_dssp             TTCEEEESSTTBHHHHHHHHHHHHHTCEEEEEESSHHHHHHHHH----HTC-S---EEEETTTSCHHHHHHHHTT--TCC
T ss_pred             CCCEEEEECCCCHHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHH----cCC-C---EEEECCCccHHHHHHHHhC--CCC
Confidence            58999999999999999999999999999999998766554432    232 2   2357776554444433221  136


Q ss_pred             ccEEEEccc
Q 044010          126 LDHLVNNAG  134 (248)
Q Consensus       126 id~vv~~ag  134 (248)
                      +|++|+|+|
T Consensus       210 ~D~vi~~~g  218 (327)
T 1qor_A          210 VRVVYDSVG  218 (327)
T ss_dssp             EEEEEECSC
T ss_pred             ceEEEECCc
Confidence            999999998

>1wly_A CAAR, 2-haloacrylate reductase; NADPH-dependent oxidoreductase, oxidoreductase; 1.30A {Burkholderia SP}

Probab=98.30  E-value=1.8e-06  Score=74.12  Aligned_cols=80  Identities=21%  Similarity=0.231  Sum_probs=58.2

Q ss_pred             CCCEEEEcCCCChHHHHHHHHHHHcCCeEEEEeCCcchHHHHHHHHHhhCCCcEEEEEccCCCHHHHHHHHHHHHhHcCC
Q 044010           46 SGKVVIITGASSGIGEHLAYEYARRGACLALCARREKSLEEVADTAREIGSPDVITIRADVSKVDDCRSLVEETMNHFGR  125 (248)
Q Consensus        46 ~~k~~lVtGg~~gIG~aia~~l~~~G~~V~l~~r~~~~~~~~~~~l~~~~~~~v~~~~~D~~~~~~~~~~~~~~~~~~g~  125 (248)
                      .|++++|+|++||||.++++.+...|++|++++|++++.+.+.    +.+. .   ..+|.++.+..+++.+.. . ..+
T Consensus       145 ~g~~vlV~Ga~ggiG~~~~~~a~~~G~~Vi~~~~~~~~~~~~~----~~g~-~---~~~d~~~~~~~~~i~~~~-~-~~~  214 (333)
T 1wly_A          145 PGDYVLIHAAAGGMGHIMVPWARHLGATVIGTVSTEEKAETAR----KLGC-H---HTINYSTQDFAEVVREIT-G-GKG  214 (333)
T ss_dssp             TTCEEEETTTTSTTHHHHHHHHHHTTCEEEEEESSHHHHHHHH----HHTC-S---EEEETTTSCHHHHHHHHH-T-TCC
T ss_pred             CCCEEEEECCccHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHH----HcCC-C---EEEECCCHHHHHHHHHHh-C-CCC
Confidence            5899999999999999999999999999999999876655443    2332 2   234777654444433322 1 136


Q ss_pred             ccEEEEcccc
Q 044010          126 LDHLVNNAGI  135 (248)
Q Consensus       126 id~vv~~ag~  135 (248)
                      +|++|+|+|.
T Consensus       215 ~d~vi~~~g~  224 (333)
T 1wly_A          215 VDVVYDSIGK  224 (333)
T ss_dssp             EEEEEECSCT
T ss_pred             CeEEEECCcH
Confidence            9999999984

>3jyo_A Quinate/shikimate dehydrogenase; enzyme-cofactor complex, amino-acid biosynthesis, aromatic A biosynthesis, NAD, oxidoreductase; HET: NAD; 1.00A {Corynebacterium glutamicum} PDB: 3jyp_A* 3jyq_A* 2nlo_A

Probab=98.29  E-value=2.3e-06  Score=72.17  Aligned_cols=82  Identities=18%  Similarity=0.301  Sum_probs=61.9

Q ss_pred             cCCCCCEEEEcCCCChHHHHHHHHHHHcCC-eEEEEeCCcchHHHHHHHHHhhCCCcEEEEEccCCCHHHHHHHHHHHHh
Q 044010           43 EDVSGKVVIITGASSGIGEHLAYEYARRGA-CLALCARREKSLEEVADTAREIGSPDVITIRADVSKVDDCRSLVEETMN  121 (248)
Q Consensus        43 ~~~~~k~~lVtGg~~gIG~aia~~l~~~G~-~V~l~~r~~~~~~~~~~~l~~~~~~~v~~~~~D~~~~~~~~~~~~~~~~  121 (248)
                      .++++|+++|+|+ ||+|++++..|++.|+ +|.+.+|+.++.++..+++...+. .+.....+..   ++.+.+.    
T Consensus       123 ~~l~~k~vlVlGa-GG~g~aia~~L~~~G~~~v~i~~R~~~~a~~la~~~~~~~~-~~~i~~~~~~---~l~~~l~----  193 (283)
T 3jyo_A          123 PNAKLDSVVQVGA-GGVGNAVAYALVTHGVQKLQVADLDTSRAQALADVINNAVG-REAVVGVDAR---GIEDVIA----  193 (283)
T ss_dssp             TTCCCSEEEEECC-SHHHHHHHHHHHHTTCSEEEEECSSHHHHHHHHHHHHHHHT-SCCEEEECST---THHHHHH----
T ss_pred             cCcCCCEEEEECC-cHHHHHHHHHHHHCCCCEEEEEECCHHHHHHHHHHHHhhcC-CceEEEcCHH---HHHHHHh----
Confidence            3689999999998 7999999999999999 799999999999988888876542 2222333432   3333332    


Q ss_pred             HcCCccEEEEccccC
Q 044010          122 HFGRLDHLVNNAGIS  136 (248)
Q Consensus       122 ~~g~id~vv~~ag~~  136 (248)
                         +.|++||+.+..
T Consensus       194 ---~~DiVInaTp~G  205 (283)
T 3jyo_A          194 ---AADGVVNATPMG  205 (283)
T ss_dssp             ---HSSEEEECSSTT
T ss_pred             ---cCCEEEECCCCC
Confidence               589999998754

>3t4e_A Quinate/shikimate dehydrogenase; structural genomics, center for structural genomics of infec diseases, csgid; HET: NAD; 1.95A {Salmonella enterica subsp} PDB: 1npd_A* 1o9b_A* 1vi2_A*

Probab=98.28  E-value=5.2e-06  Score=70.84  Aligned_cols=84  Identities=20%  Similarity=0.247  Sum_probs=63.0

Q ss_pred             cCCCCCEEEEcCCCChHHHHHHHHHHHcCC-eEEEEeCC---cchHHHHHHHHHhhCCCcEEEEEccCCCHHHHHHHHHH
Q 044010           43 EDVSGKVVIITGASSGIGEHLAYEYARRGA-CLALCARR---EKSLEEVADTAREIGSPDVITIRADVSKVDDCRSLVEE  118 (248)
Q Consensus        43 ~~~~~k~~lVtGg~~gIG~aia~~l~~~G~-~V~l~~r~---~~~~~~~~~~l~~~~~~~v~~~~~D~~~~~~~~~~~~~  118 (248)
                      .++++|+++|+|+ ||.|++++..|++.|+ +|.+.+|+   .++.++..+++....+..+.  ..+..+.+...+.+  
T Consensus       144 ~~l~gk~~lVlGA-GGaaraia~~L~~~G~~~v~v~nRt~~~~~~a~~la~~~~~~~~~~v~--~~~~~~l~~~~~~l--  218 (312)
T 3t4e_A          144 FDMRGKTMVLLGA-GGAATAIGAQAAIEGIKEIKLFNRKDDFFEKAVAFAKRVNENTDCVVT--VTDLADQHAFTEAL--  218 (312)
T ss_dssp             CCCTTCEEEEECC-SHHHHHHHHHHHHTTCSEEEEEECSSTHHHHHHHHHHHHHHHSSCEEE--EEETTCHHHHHHHH--
T ss_pred             CCcCCCEEEEECc-CHHHHHHHHHHHHcCCCEEEEEECCCchHHHHHHHHHHhhhccCcceE--EechHhhhhhHhhc--
Confidence            4689999999997 8999999999999998 89999999   77777777777765543333  34555543222222  


Q ss_pred             HHhHcCCccEEEEccccC
Q 044010          119 TMNHFGRLDHLVNNAGIS  136 (248)
Q Consensus       119 ~~~~~g~id~vv~~ag~~  136 (248)
                           .+.|++||+.+..
T Consensus       219 -----~~~DiIINaTp~G  231 (312)
T 3t4e_A          219 -----ASADILTNGTKVG  231 (312)
T ss_dssp             -----HHCSEEEECSSTT
T ss_pred             -----cCceEEEECCcCC
Confidence                 2589999998764

>2zb4_A Prostaglandin reductase 2; rossmann fold, alternative splicing, cytoplasm, NADP, oxidoreductase; HET: NAP 5OP; 1.63A {Homo sapiens} PDB: 2zb7_A* 2zb8_A* 2w98_A* 2vna_A* 2w4q_A* 1vj1_A 2zb3_A*

Probab=98.26  E-value=1.4e-06  Score=75.68  Aligned_cols=79  Identities=16%  Similarity=0.216  Sum_probs=56.3

Q ss_pred             CC--CEEEEcCCCChHHHHHHHHHHHcCC-eEEEEeCCcchHHHHHHHHHhhCCCcEEEEEccCCCHHHHHHHHHHHHhH
Q 044010           46 SG--KVVIITGASSGIGEHLAYEYARRGA-CLALCARREKSLEEVADTAREIGSPDVITIRADVSKVDDCRSLVEETMNH  122 (248)
Q Consensus        46 ~~--k~~lVtGg~~gIG~aia~~l~~~G~-~V~l~~r~~~~~~~~~~~l~~~~~~~v~~~~~D~~~~~~~~~~~~~~~~~  122 (248)
                      +|  ++++|+|++||||.++++.+...|+ +|+++++++++.+.+.++   .+. .   ..+|.++.+ +.+.+.+... 
T Consensus       158 ~g~~~~vlI~GasggiG~~~~~~a~~~Ga~~Vi~~~~~~~~~~~~~~~---~g~-~---~~~d~~~~~-~~~~~~~~~~-  228 (357)
T 2zb4_A          158 AGSNKTMVVSGAAGACGSVAGQIGHFLGCSRVVGICGTHEKCILLTSE---LGF-D---AAINYKKDN-VAEQLRESCP-  228 (357)
T ss_dssp             TTSCCEEEESSTTBHHHHHHHHHHHHTTCSEEEEEESCHHHHHHHHHT---SCC-S---EEEETTTSC-HHHHHHHHCT-
T ss_pred             CCCccEEEEECCCcHHHHHHHHHHHHCCCCeEEEEeCCHHHHHHHHHH---cCC-c---eEEecCchH-HHHHHHHhcC-
Confidence            46  8999999999999999999999999 999999987655544322   232 2   235776643 3333333222 


Q ss_pred             cCCccEEEEccc
Q 044010          123 FGRLDHLVNNAG  134 (248)
Q Consensus       123 ~g~id~vv~~ag  134 (248)
                       +.+|++|+|+|
T Consensus       229 -~~~d~vi~~~G  239 (357)
T 2zb4_A          229 -AGVDVYFDNVG  239 (357)
T ss_dssp             -TCEEEEEESCC
T ss_pred             -CCCCEEEECCC
Confidence             26999999998

>2j8z_A Quinone oxidoreductase; medium-chain dehydrogenase- reductases, QUIN oxidoreductase, oxidative stress response; HET: NAP; 2.50A {Homo sapiens} PDB: 2oby_A*

Probab=98.24  E-value=2.3e-06  Score=74.30  Aligned_cols=80  Identities=20%  Similarity=0.235  Sum_probs=57.7

Q ss_pred             CCCEEEEcCCCChHHHHHHHHHHHcCCeEEEEeCCcchHHHHHHHHHhhCCCcEEEEEccCCCHHHHHHHHHHHHhHcCC
Q 044010           46 SGKVVIITGASSGIGEHLAYEYARRGACLALCARREKSLEEVADTAREIGSPDVITIRADVSKVDDCRSLVEETMNHFGR  125 (248)
Q Consensus        46 ~~k~~lVtGg~~gIG~aia~~l~~~G~~V~l~~r~~~~~~~~~~~l~~~~~~~v~~~~~D~~~~~~~~~~~~~~~~~~g~  125 (248)
                      +|++++|+||+||||.++++.+...|++|++++|++++.+.+ +   +.+. .   ..+|.++.+..+++.+.. . .+.
T Consensus       162 ~g~~vlV~Ga~ggiG~~~~~~a~~~Ga~Vi~~~~~~~~~~~~-~---~~g~-~---~~~~~~~~~~~~~~~~~~-~-~~~  231 (354)
T 2j8z_A          162 AGDYVLIHAGLSGVGTAAIQLTRMAGAIPLVTAGSQKKLQMA-E---KLGA-A---AGFNYKKEDFSEATLKFT-K-GAG  231 (354)
T ss_dssp             TTCEEEESSTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHH-H---HHTC-S---EEEETTTSCHHHHHHHHT-T-TSC
T ss_pred             CCCEEEEECCccHHHHHHHHHHHHcCCEEEEEeCCHHHHHHH-H---HcCC-c---EEEecCChHHHHHHHHHh-c-CCC
Confidence            589999999999999999999999999999999988765544 2   2232 2   235776654333333221 1 136


Q ss_pred             ccEEEEcccc
Q 044010          126 LDHLVNNAGI  135 (248)
Q Consensus       126 id~vv~~ag~  135 (248)
                      +|++|+|+|.
T Consensus       232 ~d~vi~~~G~  241 (354)
T 2j8z_A          232 VNLILDCIGG  241 (354)
T ss_dssp             EEEEEESSCG
T ss_pred             ceEEEECCCc
Confidence            9999999984

>4b7c_A Probable oxidoreductase; NADP cofactor, rossmann fold; HET: MES; 2.10A {Pseudomonas aeruginosa PA01} PDB: 4b7x_A*

Probab=98.22  E-value=2.2e-06  Score=73.74  Aligned_cols=80  Identities=21%  Similarity=0.260  Sum_probs=57.1

Q ss_pred             CCCEEEEcCCCChHHHHHHHHHHHcCCeEEEEeCCcchHHHHHHHHHhhCCCcEEEEEccCCCHHHHHHHHHHHHhHcCC
Q 044010           46 SGKVVIITGASSGIGEHLAYEYARRGACLALCARREKSLEEVADTAREIGSPDVITIRADVSKVDDCRSLVEETMNHFGR  125 (248)
Q Consensus        46 ~~k~~lVtGg~~gIG~aia~~l~~~G~~V~l~~r~~~~~~~~~~~l~~~~~~~v~~~~~D~~~~~~~~~~~~~~~~~~g~  125 (248)
                      +|+++||+|++||||.++++.+...|++|+++++++++.+.+.+   +.+. .   ...|.++.+..+.+ .+..  .+.
T Consensus       149 ~g~~vlI~Ga~g~iG~~~~~~a~~~Ga~Vi~~~~~~~~~~~~~~---~~g~-~---~~~~~~~~~~~~~~-~~~~--~~~  218 (336)
T 4b7c_A          149 NGETVVISGAAGAVGSVAGQIARLKGCRVVGIAGGAEKCRFLVE---ELGF-D---GAIDYKNEDLAAGL-KREC--PKG  218 (336)
T ss_dssp             TTCEEEESSTTSHHHHHHHHHHHHTTCEEEEEESSHHHHHHHHH---TTCC-S---EEEETTTSCHHHHH-HHHC--TTC
T ss_pred             CCCEEEEECCCCHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHH---HcCC-C---EEEECCCHHHHHHH-HHhc--CCC
Confidence            68999999999999999999999999999999998866554422   2332 2   23466664433333 2221  247


Q ss_pred             ccEEEEcccc
Q 044010          126 LDHLVNNAGI  135 (248)
Q Consensus       126 id~vv~~ag~  135 (248)
                      +|++++|+|.
T Consensus       219 ~d~vi~~~g~  228 (336)
T 4b7c_A          219 IDVFFDNVGG  228 (336)
T ss_dssp             EEEEEESSCH
T ss_pred             ceEEEECCCc
Confidence            9999999983

>1yb5_A Quinone oxidoreductase; medium-chain dehydrogenase/reductase, quinon reduction, structural genomics, structural genomics consort; HET: NAP; 1.85A {Homo sapiens} SCOP: b.35.1.2 c.2.1.1

Probab=98.21  E-value=4e-06  Score=72.67  Aligned_cols=79  Identities=16%  Similarity=0.159  Sum_probs=56.6

Q ss_pred             CCCEEEEcCCCChHHHHHHHHHHHcCCeEEEEeCCcchHHHHHHHHHhhCCCcEEEEEccCCCHHHHHHHHHHHHhHcCC
Q 044010           46 SGKVVIITGASSGIGEHLAYEYARRGACLALCARREKSLEEVADTAREIGSPDVITIRADVSKVDDCRSLVEETMNHFGR  125 (248)
Q Consensus        46 ~~k~~lVtGg~~gIG~aia~~l~~~G~~V~l~~r~~~~~~~~~~~l~~~~~~~v~~~~~D~~~~~~~~~~~~~~~~~~g~  125 (248)
                      .|++++|+|++||+|.++++.+...|++|++++|++++.+.    .++.+. .   ..+|.++.+..+++.+.. . ..+
T Consensus       170 ~g~~vlV~GasggiG~~~~~~a~~~Ga~Vi~~~~~~~~~~~----~~~~ga-~---~~~d~~~~~~~~~~~~~~-~-~~~  239 (351)
T 1yb5_A          170 AGESVLVHGASGGVGLAACQIARAYGLKILGTAGTEEGQKI----VLQNGA-H---EVFNHREVNYIDKIKKYV-G-EKG  239 (351)
T ss_dssp             TTCEEEEETCSSHHHHHHHHHHHHTTCEEEEEESSHHHHHH----HHHTTC-S---EEEETTSTTHHHHHHHHH-C-TTC
T ss_pred             CcCEEEEECCCChHHHHHHHHHHHCCCEEEEEeCChhHHHH----HHHcCC-C---EEEeCCCchHHHHHHHHc-C-CCC
Confidence            58999999999999999999999999999999998766553    233332 2   235776654333332221 1 127


Q ss_pred             ccEEEEccc
Q 044010          126 LDHLVNNAG  134 (248)
Q Consensus       126 id~vv~~ag  134 (248)
                      +|++|+|+|
T Consensus       240 ~D~vi~~~G  248 (351)
T 1yb5_A          240 IDIIIEMLA  248 (351)
T ss_dssp             EEEEEESCH
T ss_pred             cEEEEECCC
Confidence            999999998

>2cdc_A Glucose dehydrogenase glucose 1-dehydrogenase, DHG-1; reductase, oxidoreductase, MDR family; HET: XYS XYP NAP; 1.50A {Sulfolobus solfataricus} PDB: 2cdb_A* 2cd9_A 2cda_A*

Probab=98.20  E-value=5.8e-06  Score=72.00  Aligned_cols=100  Identities=16%  Similarity=0.276  Sum_probs=66.8

Q ss_pred             CCCCCEEEEcCCCChHHHHHHHHHHHcCCeEEEEeCCc---chHHHHHHHHHhhCCCcEEEEEccCCCHHHHHHHHHHHH
Q 044010           44 DVSGKVVIITGASSGIGEHLAYEYARRGACLALCARRE---KSLEEVADTAREIGSPDVITIRADVSKVDDCRSLVEETM  120 (248)
Q Consensus        44 ~~~~k~~lVtGg~~gIG~aia~~l~~~G~~V~l~~r~~---~~~~~~~~~l~~~~~~~v~~~~~D~~~~~~~~~~~~~~~  120 (248)
                      +++|++++|+|+ |++|..+++.+...|++|+++++++   ++.+.    +++.+.   ..+  | ++  ++.+.+.+ .
T Consensus       178 ~~~g~~VlV~Ga-G~vG~~~~q~a~~~Ga~Vi~~~~~~~~~~~~~~----~~~~ga---~~v--~-~~--~~~~~~~~-~  243 (366)
T 2cdc_A          178 TLNCRKVLVVGT-GPIGVLFTLLFRTYGLEVWMANRREPTEVEQTV----IEETKT---NYY--N-SS--NGYDKLKD-S  243 (366)
T ss_dssp             SSTTCEEEEESC-HHHHHHHHHHHHHHTCEEEEEESSCCCHHHHHH----HHHHTC---EEE--E-CT--TCSHHHHH-H
T ss_pred             cCCCCEEEEECC-CHHHHHHHHHHHhCCCEEEEEeCCccchHHHHH----HHHhCC---cee--c-hH--HHHHHHHH-h
Confidence            344999999999 9999999998888999999999987   55432    223332   223  6 54  32222332 2


Q ss_pred             hHcCCccEEEEccccCCcccccccCChHHHHHHHHhhhHHHHHHH-HHHhhhhhhcCCeEEEEcCcc
Q 044010          121 NHFGRLDHLVNNAGISSVALFEDIVNITDFKQIMNINFWGSVYTT-RFAVPHLRYTKGKIVVLSSAA  186 (248)
Q Consensus       121 ~~~g~id~vv~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~-~~~~~~~~~~~g~iV~isS~~  186 (248)
                       . +++|++|+++|...                          .+ +...+.++ .+|++|+++...
T Consensus       244 -~-~~~d~vid~~g~~~--------------------------~~~~~~~~~l~-~~G~iv~~g~~~  281 (366)
T 2cdc_A          244 -V-GKFDVIIDATGADV--------------------------NILGNVIPLLG-RNGVLGLFGFST  281 (366)
T ss_dssp             -H-CCEEEEEECCCCCT--------------------------HHHHHHGGGEE-EEEEEEECSCCC
T ss_pred             -C-CCCCEEEECCCChH--------------------------HHHHHHHHHHh-cCCEEEEEecCC
Confidence             2 68999999998521                          12 44455554 568898887643

>1id1_A Putative potassium channel protein; RCK domain, E.coli potassium channel, BK channel, rossmann fold, membrane protein; 2.40A {Escherichia coli} SCOP: c.2.1.9

Probab=98.13  E-value=1.2e-05  Score=61.13  Aligned_cols=79  Identities=10%  Similarity=0.150  Sum_probs=58.4

Q ss_pred             CCCCEEEEcCCCChHHHHHHHHHHHcCCeEEEEeCCc-chHHHHHHHHHhhCCCcEEEEEccCCCHHHHHHHHHHHHhHc
Q 044010           45 VSGKVVIITGASSGIGEHLAYEYARRGACLALCARRE-KSLEEVADTAREIGSPDVITIRADVSKVDDCRSLVEETMNHF  123 (248)
Q Consensus        45 ~~~k~~lVtGg~~gIG~aia~~l~~~G~~V~l~~r~~-~~~~~~~~~l~~~~~~~v~~~~~D~~~~~~~~~~~~~~~~~~  123 (248)
                      |.+++++|.|+ |.+|..+++.|.++|++|+++++++ ++.+...+..    ...+.++..|.++.+.++++      ..
T Consensus         1 ~~~~~vlI~G~-G~vG~~la~~L~~~g~~V~vid~~~~~~~~~~~~~~----~~~~~~i~gd~~~~~~l~~a------~i   69 (153)
T 1id1_A            1 HRKDHFIVCGH-SILAINTILQLNQRGQNVTVISNLPEDDIKQLEQRL----GDNADVIPGDSNDSSVLKKA------GI   69 (153)
T ss_dssp             CCCSCEEEECC-SHHHHHHHHHHHHTTCCEEEEECCCHHHHHHHHHHH----CTTCEEEESCTTSHHHHHHH------TT
T ss_pred             CCCCcEEEECC-CHHHHHHHHHHHHCCCCEEEEECCChHHHHHHHHhh----cCCCeEEEcCCCCHHHHHHc------Ch
Confidence            45678888986 9999999999999999999999974 4333333322    12467889999998876554      12


Q ss_pred             CCccEEEEccc
Q 044010          124 GRLDHLVNNAG  134 (248)
Q Consensus       124 g~id~vv~~ag  134 (248)
                      .+.|.+|.+.+
T Consensus        70 ~~ad~vi~~~~   80 (153)
T 1id1_A           70 DRCRAILALSD   80 (153)
T ss_dssp             TTCSEEEECSS
T ss_pred             hhCCEEEEecC
Confidence            37899988764

>1p77_A Shikimate 5-dehydrogenase; NADPH, oxidoreductase; HET: ATR; 1.95A {Haemophilus influenzae} SCOP: c.2.1.7 c.58.1.5 PDB: 1p74_A*

Probab=98.09  E-value=1.4e-05  Score=66.89  Aligned_cols=78  Identities=17%  Similarity=0.204  Sum_probs=58.6

Q ss_pred             cCCCCCEEEEcCCCChHHHHHHHHHHHcCCeEEEEeCCcchHHHHHHHHHhhCCCcEEEEEccCCCHHHHHHHHHHHHhH
Q 044010           43 EDVSGKVVIITGASSGIGEHLAYEYARRGACLALCARREKSLEEVADTAREIGSPDVITIRADVSKVDDCRSLVEETMNH  122 (248)
Q Consensus        43 ~~~~~k~~lVtGg~~gIG~aia~~l~~~G~~V~l~~r~~~~~~~~~~~l~~~~~~~v~~~~~D~~~~~~~~~~~~~~~~~  122 (248)
                      .++++|+++|+|+ ||+|++++..|++.|++|.+.+|+.++.++..+++...+  .+..  +|+   +++.       + 
T Consensus       115 ~~~~~~~vlvlGa-Gg~g~a~a~~L~~~G~~v~v~~R~~~~a~~l~~~~~~~~--~~~~--~~~---~~~~-------~-  178 (272)
T 1p77_A          115 WLRPNQHVLILGA-GGATKGVLLPLLQAQQNIVLANRTFSKTKELAERFQPYG--NIQA--VSM---DSIP-------L-  178 (272)
T ss_dssp             CCCTTCEEEEECC-SHHHHTTHHHHHHTTCEEEEEESSHHHHHHHHHHHGGGS--CEEE--EEG---GGCC-------C-
T ss_pred             CCcCCCEEEEECC-cHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHccccC--CeEE--eeH---HHhc-------c-
Confidence            3678999999998 799999999999999999999999988888877775432  2222  232   1110       1 


Q ss_pred             cCCccEEEEccccCC
Q 044010          123 FGRLDHLVNNAGISS  137 (248)
Q Consensus       123 ~g~id~vv~~ag~~~  137 (248)
                       ++.|++||+++...
T Consensus       179 -~~~DivIn~t~~~~  192 (272)
T 1p77_A          179 -QTYDLVINATSAGL  192 (272)
T ss_dssp             -SCCSEEEECCCC--
T ss_pred             -CCCCEEEECCCCCC
Confidence             48999999998754

>1jvb_A NAD(H)-dependent alcohol dehydrogenase; archaeon, zinc, oxidoreductase; HET: MSE; 1.85A {Sulfolobus solfataricus} SCOP: b.35.1.2 c.2.1.1 PDB: 1r37_A* 1nto_A 1nvg_A 3i4c_A 2eer_A*

Probab=98.09  E-value=8.3e-06  Score=70.44  Aligned_cols=80  Identities=19%  Similarity=0.285  Sum_probs=56.6

Q ss_pred             CCCEEEEcCCCChHHHHHHHHHHHc-CCeEEEEeCCcchHHHHHHHHHhhCCCcEEEEEccCCCHHHHHHHHHHHHhHcC
Q 044010           46 SGKVVIITGASSGIGEHLAYEYARR-GACLALCARREKSLEEVADTAREIGSPDVITIRADVSKVDDCRSLVEETMNHFG  124 (248)
Q Consensus        46 ~~k~~lVtGg~~gIG~aia~~l~~~-G~~V~l~~r~~~~~~~~~~~l~~~~~~~v~~~~~D~~~~~~~~~~~~~~~~~~g  124 (248)
                      +|++++|+|++++||..+++.+... |++|+++++++++.+.+    ++.+. .   ..+|.++.+..++ +.++.+. +
T Consensus       170 ~g~~vlV~Gagg~iG~~~~~~a~~~~Ga~Vi~~~~~~~~~~~~----~~~g~-~---~~~~~~~~~~~~~-~~~~~~~-~  239 (347)
T 1jvb_A          170 PTKTLLVVGAGGGLGTMAVQIAKAVSGATIIGVDVREEAVEAA----KRAGA-D---YVINASMQDPLAE-IRRITES-K  239 (347)
T ss_dssp             TTCEEEEETTTSHHHHHHHHHHHHHTCCEEEEEESSHHHHHHH----HHHTC-S---EEEETTTSCHHHH-HHHHTTT-S
T ss_pred             CCCEEEEECCCccHHHHHHHHHHHcCCCeEEEEcCCHHHHHHH----HHhCC-C---EEecCCCccHHHH-HHHHhcC-C
Confidence            6899999999999999999999998 99999999987665544    22332 2   2246666433322 2222211 5


Q ss_pred             CccEEEEcccc
Q 044010          125 RLDHLVNNAGI  135 (248)
Q Consensus       125 ~id~vv~~ag~  135 (248)
                      .+|++|+++|.
T Consensus       240 ~~d~vi~~~g~  250 (347)
T 1jvb_A          240 GVDAVIDLNNS  250 (347)
T ss_dssp             CEEEEEESCCC
T ss_pred             CceEEEECCCC
Confidence            89999999984

>4dup_A Quinone oxidoreductase; PSI-biology, structural genomics, protein structure initiati structural genomics research consortium, nysgrc; 2.45A {Rhizobium etli}

Probab=98.07  E-value=1.6e-05  Score=68.83  Aligned_cols=79  Identities=20%  Similarity=0.220  Sum_probs=57.4

Q ss_pred             CCCEEEEcCCCChHHHHHHHHHHHcCCeEEEEeCCcchHHHHHHHHHhhCCCcEEEEEccCCCHHHHHHHHHHHHhHcCC
Q 044010           46 SGKVVIITGASSGIGEHLAYEYARRGACLALCARREKSLEEVADTAREIGSPDVITIRADVSKVDDCRSLVEETMNHFGR  125 (248)
Q Consensus        46 ~~k~~lVtGg~~gIG~aia~~l~~~G~~V~l~~r~~~~~~~~~~~l~~~~~~~v~~~~~D~~~~~~~~~~~~~~~~~~g~  125 (248)
                      .|++++|+||+|++|.++++.+...|++|+++++++++.+.+.    +.+..    ...|.++.+..+.+ .+..  .+.
T Consensus       167 ~g~~VlV~Gg~g~iG~~~~~~a~~~Ga~Vi~~~~~~~~~~~~~----~lGa~----~~~~~~~~~~~~~~-~~~~--~~g  235 (353)
T 4dup_A          167 EGESVLIHGGTSGIGTTAIQLARAFGAEVYATAGSTGKCEACE----RLGAK----RGINYRSEDFAAVI-KAET--GQG  235 (353)
T ss_dssp             TTCEEEESSTTSHHHHHHHHHHHHTTCEEEEEESSHHHHHHHH----HHTCS----EEEETTTSCHHHHH-HHHH--SSC
T ss_pred             CCCEEEEEcCCCHHHHHHHHHHHHcCCEEEEEeCCHHHHHHHH----hcCCC----EEEeCCchHHHHHH-HHHh--CCC
Confidence            6889999999999999999999999999999999887665443    23332    22466554433333 3322  357


Q ss_pred             ccEEEEcccc
Q 044010          126 LDHLVNNAGI  135 (248)
Q Consensus       126 id~vv~~ag~  135 (248)
                      +|++++++|.
T Consensus       236 ~Dvvid~~g~  245 (353)
T 4dup_A          236 VDIILDMIGA  245 (353)
T ss_dssp             EEEEEESCCG
T ss_pred             ceEEEECCCH
Confidence            9999999984

>1smk_A Malate dehydrogenase, glyoxysomal; tricarboxylic cycle, glyoxysome, NAD, glyoxylate bypass, oxidoreductase; HET: CIT; 2.50A {Citrullus lanatus} PDB: 1sev_A

Probab=98.03  E-value=9.1e-05  Score=63.56  Aligned_cols=114  Identities=17%  Similarity=0.121  Sum_probs=72.1

Q ss_pred             CEEEEcCCCChHHHHHHHHHHHcC--CeEEEEeCCcchHHHHHHHHHhhCCC-cEEEEEccCCCHHHHHHHHHHHHhHcC
Q 044010           48 KVVIITGASSGIGEHLAYEYARRG--ACLALCARREKSLEEVADTAREIGSP-DVITIRADVSKVDDCRSLVEETMNHFG  124 (248)
Q Consensus        48 k~~lVtGg~~gIG~aia~~l~~~G--~~V~l~~r~~~~~~~~~~~l~~~~~~-~v~~~~~D~~~~~~~~~~~~~~~~~~g  124 (248)
                      .+++||||+|.+|.+++..|+++|  .+|++.+++++  +.....+...... .+..    +++.++.++++       .
T Consensus         9 mKI~ViGAaG~VG~~la~~L~~~g~~~ev~l~Di~~~--~~~~~dL~~~~~~~~v~~----~~~t~d~~~al-------~   75 (326)
T 1smk_A            9 FKVAILGAAGGIGQPLAMLMKMNPLVSVLHLYDVVNA--PGVTADISHMDTGAVVRG----FLGQQQLEAAL-------T   75 (326)
T ss_dssp             EEEEEETTTSTTHHHHHHHHHHCTTEEEEEEEESSSH--HHHHHHHHTSCSSCEEEE----EESHHHHHHHH-------T
T ss_pred             CEEEEECCCChHHHHHHHHHHhCCCCCEEEEEeCCCc--HhHHHHhhcccccceEEE----EeCCCCHHHHc-------C
Confidence            479999999999999999999998  78999998765  2223334432211 2222    22334444443       3


Q ss_pred             CccEEEEccccCCcccccccCChHHHHHHHHhhhHHHHHHHHHHhhhhhhcCCeEEEEc
Q 044010          125 RLDHLVNNAGISSVALFEDIVNITDFKQIMNINFWGSVYTTRFAVPHLRYTKGKIVVLS  183 (248)
Q Consensus       125 ~id~vv~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~g~iV~is  183 (248)
                      +.|++|++||.......    +..   ..+..|+.....+.+.+.+.-  .++.+++.|
T Consensus        76 gaDvVi~~ag~~~~~g~----~r~---dl~~~N~~~~~~i~~~i~~~~--p~~~viv~S  125 (326)
T 1smk_A           76 GMDLIIVPAGVPRKPGM----TRD---DLFKINAGIVKTLCEGIAKCC--PRAIVNLIS  125 (326)
T ss_dssp             TCSEEEECCCCCCCSSC----CCS---HHHHHHHHHHHHHHHHHHHHC--TTSEEEECC
T ss_pred             CCCEEEEcCCcCCCCCC----CHH---HHHHHHHHHHHHHHHHHHhhC--CCeEEEEEC
Confidence            79999999996532211    112   346778888888887776542  234555544

>3abi_A Putative uncharacterized protein PH1688; L-lysine dehydrogenase, oxidoreductase; HET: NAD; 2.44A {Pyrococcus horikoshii}

Probab=98.03  E-value=9.7e-06  Score=70.65  Aligned_cols=77  Identities=18%  Similarity=0.325  Sum_probs=56.7

Q ss_pred             cCCCCC--EEEEcCCCChHHHHHHHHHHHcCCeEEEEeCCcchHHHHHHHHHhhCCCcEEEEEccCCCHHHHHHHHHHHH
Q 044010           43 EDVSGK--VVIITGASSGIGEHLAYEYARRGACLALCARREKSLEEVADTAREIGSPDVITIRADVSKVDDCRSLVEETM  120 (248)
Q Consensus        43 ~~~~~k--~~lVtGg~~gIG~aia~~l~~~G~~V~l~~r~~~~~~~~~~~l~~~~~~~v~~~~~D~~~~~~~~~~~~~~~  120 (248)
                      .+|+||  +++|.|+ |++|+.+++.|++ .++|.+.+++.+++++..+        .+..+.+|++|.+++.++++   
T Consensus        10 ~~~~g~~mkilvlGa-G~vG~~~~~~L~~-~~~v~~~~~~~~~~~~~~~--------~~~~~~~d~~d~~~l~~~~~---   76 (365)
T 3abi_A           10 HHIEGRHMKVLILGA-GNIGRAIAWDLKD-EFDVYIGDVNNENLEKVKE--------FATPLKVDASNFDKLVEVMK---   76 (365)
T ss_dssp             ------CCEEEEECC-SHHHHHHHHHHTT-TSEEEEEESCHHHHHHHTT--------TSEEEECCTTCHHHHHHHHT---
T ss_pred             ccccCCccEEEEECC-CHHHHHHHHHHhc-CCCeEEEEcCHHHHHHHhc--------cCCcEEEecCCHHHHHHHHh---
Confidence            456555  6999998 9999999998865 5799999998766554321        44568899999998887765   


Q ss_pred             hHcCCccEEEEccccC
Q 044010          121 NHFGRLDHLVNNAGIS  136 (248)
Q Consensus       121 ~~~g~id~vv~~ag~~  136 (248)
                          +.|+||++++..
T Consensus        77 ----~~DvVi~~~p~~   88 (365)
T 3abi_A           77 ----EFELVIGALPGF   88 (365)
T ss_dssp             ----TCSEEEECCCGG
T ss_pred             ----CCCEEEEecCCc
Confidence                689999998754

>1lss_A TRK system potassium uptake protein TRKA homolog; KTN domain, NAD, RCK domain, potassium transport, potassium channel, KTRA; HET: NAD; 2.30A {Methanocaldococcus jannaschii} SCOP: c.2.1.9

Probab=98.01  E-value=3.4e-05  Score=57.05  Aligned_cols=75  Identities=20%  Similarity=0.301  Sum_probs=54.7

Q ss_pred             CCEEEEcCCCChHHHHHHHHHHHcCCeEEEEeCCcchHHHHHHHHHhhCCCcEEEEEccCCCHHHHHHHHHHHHhHcCCc
Q 044010           47 GKVVIITGASSGIGEHLAYEYARRGACLALCARREKSLEEVADTAREIGSPDVITIRADVSKVDDCRSLVEETMNHFGRL  126 (248)
Q Consensus        47 ~k~~lVtGg~~gIG~aia~~l~~~G~~V~l~~r~~~~~~~~~~~l~~~~~~~v~~~~~D~~~~~~~~~~~~~~~~~~g~i  126 (248)
                      +++++|+|+ |.+|..+++.|.++|++|++++|+++..+..    .+..  .+..+..|.++.+.+.+.      ...+.
T Consensus         4 ~m~i~IiG~-G~iG~~~a~~L~~~g~~v~~~d~~~~~~~~~----~~~~--~~~~~~~d~~~~~~l~~~------~~~~~   70 (140)
T 1lss_A            4 GMYIIIAGI-GRVGYTLAKSLSEKGHDIVLIDIDKDICKKA----SAEI--DALVINGDCTKIKTLEDA------GIEDA   70 (140)
T ss_dssp             -CEEEEECC-SHHHHHHHHHHHHTTCEEEEEESCHHHHHHH----HHHC--SSEEEESCTTSHHHHHHT------TTTTC
T ss_pred             CCEEEEECC-CHHHHHHHHHHHhCCCeEEEEECCHHHHHHH----HHhc--CcEEEEcCCCCHHHHHHc------CcccC
Confidence            457889986 9999999999999999999999987654433    2222  245677898887654321      13479


Q ss_pred             cEEEEccc
Q 044010          127 DHLVNNAG  134 (248)
Q Consensus       127 d~vv~~ag  134 (248)
                      |++|.+++
T Consensus        71 d~vi~~~~   78 (140)
T 1lss_A           71 DMYIAVTG   78 (140)
T ss_dssp             SEEEECCS
T ss_pred             CEEEEeeC
Confidence            99999864

>2g1u_A Hypothetical protein TM1088A; structural genomics, joint center for structural genomics, J protein structure initiative, PSI-2; HET: AMP; 1.50A {Thermotoga maritima} PDB: 3l4b_A*

Probab=98.00  E-value=6.1e-06  Score=62.91  Aligned_cols=84  Identities=13%  Similarity=0.220  Sum_probs=57.1

Q ss_pred             hhccccCCCCCEEEEcCCCChHHHHHHHHHHHcCCeEEEEeCCcchHHHHHHHHHhhCCCcEEEEEccCCCHHHHHHHHH
Q 044010           38 NSIFSEDVSGKVVIITGASSGIGEHLAYEYARRGACLALCARREKSLEEVADTAREIGSPDVITIRADVSKVDDCRSLVE  117 (248)
Q Consensus        38 ~~~~~~~~~~k~~lVtGg~~gIG~aia~~l~~~G~~V~l~~r~~~~~~~~~~~l~~~~~~~v~~~~~D~~~~~~~~~~~~  117 (248)
                      ..-++.+..+++++|.|+ |.+|..+++.|.+.|++|++++|++++.+..    ++..  ....+..|.++.+.+.++  
T Consensus        10 ~~~~~~~~~~~~v~IiG~-G~iG~~la~~L~~~g~~V~vid~~~~~~~~~----~~~~--g~~~~~~d~~~~~~l~~~--   80 (155)
T 2g1u_A           10 HHHMSKKQKSKYIVIFGC-GRLGSLIANLASSSGHSVVVVDKNEYAFHRL----NSEF--SGFTVVGDAAEFETLKEC--   80 (155)
T ss_dssp             -------CCCCEEEEECC-SHHHHHHHHHHHHTTCEEEEEESCGGGGGGS----CTTC--CSEEEESCTTSHHHHHTT--
T ss_pred             hhhhhcccCCCcEEEECC-CHHHHHHHHHHHhCCCeEEEEECCHHHHHHH----HhcC--CCcEEEecCCCHHHHHHc--
Confidence            344667888999999986 9999999999999999999999998765432    2111  344667888876544321  


Q ss_pred             HHHhHcCCccEEEEccc
Q 044010          118 ETMNHFGRLDHLVNNAG  134 (248)
Q Consensus       118 ~~~~~~g~id~vv~~ag  134 (248)
                          ...+.|++|.+.+
T Consensus        81 ----~~~~ad~Vi~~~~   93 (155)
T 2g1u_A           81 ----GMEKADMVFAFTN   93 (155)
T ss_dssp             ----TGGGCSEEEECSS
T ss_pred             ----CcccCCEEEEEeC
Confidence                1236899998875

>2vhw_A Alanine dehydrogenase; NAD, secreted, oxidoreductase; HET: NAI; 2.0A {Mycobacterium tuberculosis} PDB: 2vhx_A* 2vhy_A 2vhz_A* 2vhv_A* 2voe_A 2voj_A*

Probab=98.00  E-value=3.6e-05  Score=67.42  Aligned_cols=78  Identities=17%  Similarity=0.173  Sum_probs=57.6

Q ss_pred             CCCCCEEEEcCCCChHHHHHHHHHHHcCCeEEEEeCCcchHHHHHHHHHhhCCCcEEEEEccCCCHHHHHHHHHHHHhHc
Q 044010           44 DVSGKVVIITGASSGIGEHLAYEYARRGACLALCARREKSLEEVADTAREIGSPDVITIRADVSKVDDCRSLVEETMNHF  123 (248)
Q Consensus        44 ~~~~k~~lVtGg~~gIG~aia~~l~~~G~~V~l~~r~~~~~~~~~~~l~~~~~~~v~~~~~D~~~~~~~~~~~~~~~~~~  123 (248)
                      ++++++++|+|+ |+||.++++.+...|++|++.+|+.++.+.+.+.+    +..+   .+|..+.+++.+++.      
T Consensus       165 ~l~g~~V~ViG~-G~iG~~~a~~a~~~Ga~V~~~d~~~~~l~~~~~~~----g~~~---~~~~~~~~~l~~~l~------  230 (377)
T 2vhw_A          165 GVEPADVVVIGA-GTAGYNAARIANGMGATVTVLDINIDKLRQLDAEF----CGRI---HTRYSSAYELEGAVK------  230 (377)
T ss_dssp             TBCCCEEEEECC-SHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHT----TTSS---EEEECCHHHHHHHHH------
T ss_pred             CCCCCEEEEECC-CHHHHHHHHHHHhCCCEEEEEeCCHHHHHHHHHhc----CCee---EeccCCHHHHHHHHc------
Confidence            588999999998 99999999999999999999999887655543322    2222   234445555555443      


Q ss_pred             CCccEEEEccccC
Q 044010          124 GRLDHLVNNAGIS  136 (248)
Q Consensus       124 g~id~vv~~ag~~  136 (248)
                       +.|++|++++..
T Consensus       231 -~aDvVi~~~~~p  242 (377)
T 2vhw_A          231 -RADLVIGAVLVP  242 (377)
T ss_dssp             -HCSEEEECCCCT
T ss_pred             -CCCEEEECCCcC
Confidence             589999998754

>2eih_A Alcohol dehydrogenase; zinc ION binding protein, structural genomics, NPPSFA, natio project on protein structural and functional analyses; 2.30A {Thermus thermophilus}

Probab=97.95  E-value=2.3e-05  Score=67.51  Aligned_cols=79  Identities=22%  Similarity=0.242  Sum_probs=56.6

Q ss_pred             CCCEEEEcCCCChHHHHHHHHHHHcCCeEEEEeCCcchHHHHHHHHHhhCCCcEEEEEccCCCHHHHHHHHHHHHhHcCC
Q 044010           46 SGKVVIITGASSGIGEHLAYEYARRGACLALCARREKSLEEVADTAREIGSPDVITIRADVSKVDDCRSLVEETMNHFGR  125 (248)
Q Consensus        46 ~~k~~lVtGg~~gIG~aia~~l~~~G~~V~l~~r~~~~~~~~~~~l~~~~~~~v~~~~~D~~~~~~~~~~~~~~~~~~g~  125 (248)
                      +|++++|+|++|++|..+++.+...|++|+.+++++++.+.+.    +.+. .   ..+|.++.+ +.+.+.+..+ ..+
T Consensus       166 ~g~~vlV~Gasg~iG~~~~~~a~~~G~~Vi~~~~~~~~~~~~~----~~ga-~---~~~d~~~~~-~~~~~~~~~~-~~~  235 (343)
T 2eih_A          166 PGDDVLVMAAGSGVSVAAIQIAKLFGARVIATAGSEDKLRRAK----ALGA-D---ETVNYTHPD-WPKEVRRLTG-GKG  235 (343)
T ss_dssp             TTCEEEECSTTSTTHHHHHHHHHHTTCEEEEEESSHHHHHHHH----HHTC-S---EEEETTSTT-HHHHHHHHTT-TTC
T ss_pred             CCCEEEEECCCchHHHHHHHHHHHCCCEEEEEeCCHHHHHHHH----hcCC-C---EEEcCCccc-HHHHHHHHhC-CCC
Confidence            5889999999999999999999999999999999877665442    2332 2   125776653 3222322211 137


Q ss_pred             ccEEEEccc
Q 044010          126 LDHLVNNAG  134 (248)
Q Consensus       126 id~vv~~ag  134 (248)
                      +|++|+++|
T Consensus       236 ~d~vi~~~g  244 (343)
T 2eih_A          236 ADKVVDHTG  244 (343)
T ss_dssp             EEEEEESSC
T ss_pred             ceEEEECCC
Confidence            999999998

>2egg_A AROE, shikimate 5-dehydrogenase; dimer, X-RAY diffraction, structural genomics, NPPSFA; 2.25A {Geobacillus kaustophilus}

Probab=97.95  E-value=1.2e-05  Score=68.23  Aligned_cols=78  Identities=15%  Similarity=0.298  Sum_probs=57.1

Q ss_pred             CCCCCEEEEcCCCChHHHHHHHHHHHcCC-eEEEEeCCcchHHHHHHHHHhhCCCcEEEEEccCCCHHHHHHHHHHHHhH
Q 044010           44 DVSGKVVIITGASSGIGEHLAYEYARRGA-CLALCARREKSLEEVADTAREIGSPDVITIRADVSKVDDCRSLVEETMNH  122 (248)
Q Consensus        44 ~~~~k~~lVtGg~~gIG~aia~~l~~~G~-~V~l~~r~~~~~~~~~~~l~~~~~~~v~~~~~D~~~~~~~~~~~~~~~~~  122 (248)
                      ++++|+++|+|+ ||+|++++..|++.|+ +|.+.+|+.++.++..+++....+ .       +.+.++       +.+.
T Consensus       138 ~l~~~~vlVlGa-Gg~g~aia~~L~~~G~~~V~v~nR~~~ka~~la~~~~~~~~-~-------~~~~~~-------~~~~  201 (297)
T 2egg_A          138 TLDGKRILVIGA-GGGARGIYFSLLSTAAERIDMANRTVEKAERLVREGDERRS-A-------YFSLAE-------AETR  201 (297)
T ss_dssp             CCTTCEEEEECC-SHHHHHHHHHHHTTTCSEEEEECSSHHHHHHHHHHSCSSSC-C-------EECHHH-------HHHT
T ss_pred             CCCCCEEEEECc-HHHHHHHHHHHHHCCCCEEEEEeCCHHHHHHHHHHhhhccC-c-------eeeHHH-------HHhh
Confidence            678999999997 7999999999999998 999999998877776655432111 1       112222       2233


Q ss_pred             cCCccEEEEccccCC
Q 044010          123 FGRLDHLVNNAGISS  137 (248)
Q Consensus       123 ~g~id~vv~~ag~~~  137 (248)
                      ..+.|++|++++...
T Consensus       202 ~~~aDivIn~t~~~~  216 (297)
T 2egg_A          202 LAEYDIIINTTSVGM  216 (297)
T ss_dssp             GGGCSEEEECSCTTC
T ss_pred             hccCCEEEECCCCCC
Confidence            457999999998654

>3qwb_A Probable quinone oxidoreductase; rossmann fold, quinone oxidoreductases, NADPH, cytoplasm and oxidoreductase; HET: NDP; 1.59A {Saccharomyces cerevisiae} PDB: 3qwa_A*

Probab=97.94  E-value=1.3e-05  Score=68.76  Aligned_cols=81  Identities=23%  Similarity=0.298  Sum_probs=56.1

Q ss_pred             CCCCEEEEcCCCChHHHHHHHHHHHcCCeEEEEeCCcchHHHHHHHHHhhCCCcEEEEEccCCCHHHHHHHHHHHHhHcC
Q 044010           45 VSGKVVIITGASSGIGEHLAYEYARRGACLALCARREKSLEEVADTAREIGSPDVITIRADVSKVDDCRSLVEETMNHFG  124 (248)
Q Consensus        45 ~~~k~~lVtGg~~gIG~aia~~l~~~G~~V~l~~r~~~~~~~~~~~l~~~~~~~v~~~~~D~~~~~~~~~~~~~~~~~~g  124 (248)
                      -+|++++|+||+|++|..+++.+...|++|+.+++++++.+.+    ++.+. .   ...|.++.+..+++.+ ... ..
T Consensus       147 ~~g~~vlV~Ga~g~iG~~~~~~a~~~Ga~Vi~~~~~~~~~~~~----~~~ga-~---~~~~~~~~~~~~~~~~-~~~-~~  216 (334)
T 3qwb_A          147 KKGDYVLLFAAAGGVGLILNQLLKMKGAHTIAVASTDEKLKIA----KEYGA-E---YLINASKEDILRQVLK-FTN-GK  216 (334)
T ss_dssp             CTTCEEEESSTTBHHHHHHHHHHHHTTCEEEEEESSHHHHHHH----HHTTC-S---EEEETTTSCHHHHHHH-HTT-TS
T ss_pred             CCCCEEEEECCCCHHHHHHHHHHHHCCCEEEEEeCCHHHHHHH----HHcCC-c---EEEeCCCchHHHHHHH-HhC-CC
Confidence            3689999999999999999999888999999999987665532    33332 2   2245555433332222 111 13


Q ss_pred             CccEEEEcccc
Q 044010          125 RLDHLVNNAGI  135 (248)
Q Consensus       125 ~id~vv~~ag~  135 (248)
                      .+|++++++|.
T Consensus       217 g~D~vid~~g~  227 (334)
T 3qwb_A          217 GVDASFDSVGK  227 (334)
T ss_dssp             CEEEEEECCGG
T ss_pred             CceEEEECCCh
Confidence            69999999984

>3gms_A Putative NADPH:quinone reductase; structural genomics, putative quinone oxidoreductase, unknown function, PSI-2; 1.76A {Bacillus thuringiensis}

Probab=97.93  E-value=2.9e-05  Score=66.77  Aligned_cols=80  Identities=20%  Similarity=0.184  Sum_probs=56.2

Q ss_pred             CCCEEEEcCCCChHHHHHHHHHHHcCCeEEEEeCCcchHHHHHHHHHhhCCCcEEEEEccCCCHHHHHHHHHHHHhHcCC
Q 044010           46 SGKVVIITGASSGIGEHLAYEYARRGACLALCARREKSLEEVADTAREIGSPDVITIRADVSKVDDCRSLVEETMNHFGR  125 (248)
Q Consensus        46 ~~k~~lVtGg~~gIG~aia~~l~~~G~~V~l~~r~~~~~~~~~~~l~~~~~~~v~~~~~D~~~~~~~~~~~~~~~~~~g~  125 (248)
                      +|++++|+|+++++|..+++.+...|++|+++++++++.+.+.+    .+. .   ...|.++.+..+++ .+.. ....
T Consensus       144 ~g~~VlV~Ga~g~iG~~~~~~a~~~Ga~Vi~~~~~~~~~~~~~~----lga-~---~~~~~~~~~~~~~~-~~~~-~~~g  213 (340)
T 3gms_A          144 RNDVLLVNACGSAIGHLFAQLSQILNFRLIAVTRNNKHTEELLR----LGA-A---YVIDTSTAPLYETV-MELT-NGIG  213 (340)
T ss_dssp             TTCEEEESSTTSHHHHHHHHHHHHHTCEEEEEESSSTTHHHHHH----HTC-S---EEEETTTSCHHHHH-HHHT-TTSC
T ss_pred             CCCEEEEeCCccHHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHh----CCC-c---EEEeCCcccHHHHH-HHHh-CCCC
Confidence            68999999999999999998888889999999999887665433    333 2   22365554333222 2221 1137


Q ss_pred             ccEEEEcccc
Q 044010          126 LDHLVNNAGI  135 (248)
Q Consensus       126 id~vv~~ag~  135 (248)
                      +|++++++|.
T Consensus       214 ~Dvvid~~g~  223 (340)
T 3gms_A          214 ADAAIDSIGG  223 (340)
T ss_dssp             EEEEEESSCH
T ss_pred             CcEEEECCCC
Confidence            9999999874

>1p9o_A Phosphopantothenoylcysteine synthetase; ligase; 2.30A {Homo sapiens} SCOP: c.72.3.1

Probab=97.93  E-value=6.9e-06  Score=69.86  Aligned_cols=97  Identities=14%  Similarity=0.239  Sum_probs=65.9

Q ss_pred             CCCCCE-EEEcCCCC-----------------h-HHHHHHHHHHHcCCeEEEEeCCcchH--------HHHHHHHHhh--
Q 044010           44 DVSGKV-VIITGASS-----------------G-IGEHLAYEYARRGACLALCARREKSL--------EEVADTAREI--   94 (248)
Q Consensus        44 ~~~~k~-~lVtGg~~-----------------g-IG~aia~~l~~~G~~V~l~~r~~~~~--------~~~~~~l~~~--   94 (248)
                      +++||+ +|||+|+.                 | .|.++|+.++++|++|+++.+...-.        ....+.+...  
T Consensus        33 ~l~gk~~VLITaGgT~EpID~DpVRfItN~SSGkmG~aiAe~~~~~Ga~V~lv~g~~sl~p~~r~~~~~~~~~~~~~~~~  112 (313)
T 1p9o_A           33 GAQGRRVVLVTSGGTKVPLEARPVRFLDNFSSGRRGATSAEAFLAAGYGVLFLYRARSAFPYAHRFPPQTWLSALRPSGP  112 (313)
T ss_dssp             HHTTCCEEEEEESBCEEESSSSCSEEEEECCCCHHHHHHHHHHHHTTCEEEEEEETTSCCTTGGGSCHHHHHHHCEECCC
T ss_pred             hhcCCeEEEEeCCCcccccCCCceeEecCCCCcHHHHHHHHHHHHCCCEEEEEecCCCcCcchhccCccchhhhhccccc
Confidence            568888 99998865                 5 99999999999999999999854210        0001111100  


Q ss_pred             CCCcEEEEEccCCCHHHHHHHHHHH------------------------------HhHcCCccEEEEccccCCccc
Q 044010           95 GSPDVITIRADVSKVDDCRSLVEET------------------------------MNHFGRLDHLVNNAGISSVAL  140 (248)
Q Consensus        95 ~~~~v~~~~~D~~~~~~~~~~~~~~------------------------------~~~~g~id~vv~~ag~~~~~~  140 (248)
                      .+..+..+.+|+...+++.+++.+.                              .+.+++.|++|.+|++....+
T Consensus       113 ~~~~~~~i~v~v~sa~~m~~av~~~~~~~~~~~l~~i~f~tv~eyl~~L~~~~~~l~~~~~~di~i~aAAVsDf~~  188 (313)
T 1p9o_A          113 ALSGLLSLEAEENALPGFAEALRSYQEAAAAGTFLVVEFTTLADYLHLLQAAAQALNPLGPSAMFYLAAAVSDFYV  188 (313)
T ss_dssp             -CCSEEEEEEETTTSTTHHHHHHHHHHHHHHTCEEEEEECBHHHHHHHHHHHHHHHGGGGGGEEEEECSBCCSEEC
T ss_pred             cccccceeeeccccHHHHHHHHHHHhhhhccccceeeccccHHHHHHHHHHhhHHhhccCCCCEEEECCchhhccC
Confidence            1124556777887777777666543                              244678999999999887553

>3jyn_A Quinone oxidoreductase; rossmann fold, protein-NADPH complex; HET: NDP; 2.01A {Pseudomonas syringae PV} PDB: 3jyl_A*

Probab=97.91  E-value=1.8e-05  Score=67.65  Aligned_cols=80  Identities=18%  Similarity=0.199  Sum_probs=56.2

Q ss_pred             CCCEEEEcCCCChHHHHHHHHHHHcCCeEEEEeCCcchHHHHHHHHHhhCCCcEEEEEccCCCHHHHHHHHHHHHhHcCC
Q 044010           46 SGKVVIITGASSGIGEHLAYEYARRGACLALCARREKSLEEVADTAREIGSPDVITIRADVSKVDDCRSLVEETMNHFGR  125 (248)
Q Consensus        46 ~~k~~lVtGg~~gIG~aia~~l~~~G~~V~l~~r~~~~~~~~~~~l~~~~~~~v~~~~~D~~~~~~~~~~~~~~~~~~g~  125 (248)
                      +|++++|+||+|++|..+++.+...|++|+.+++++++.+.+.    +.+. .   ...|.++.+..+++.+..  ....
T Consensus       140 ~g~~VlV~Ga~g~iG~~~~~~a~~~Ga~Vi~~~~~~~~~~~~~----~~Ga-~---~~~~~~~~~~~~~~~~~~--~~~g  209 (325)
T 3jyn_A          140 PGEIILFHAAAGGVGSLACQWAKALGAKLIGTVSSPEKAAHAK----ALGA-W---ETIDYSHEDVAKRVLELT--DGKK  209 (325)
T ss_dssp             TTCEEEESSTTSHHHHHHHHHHHHHTCEEEEEESSHHHHHHHH----HHTC-S---EEEETTTSCHHHHHHHHT--TTCC
T ss_pred             CCCEEEEEcCCcHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHH----HcCC-C---EEEeCCCccHHHHHHHHh--CCCC
Confidence            6899999999999999999998889999999999887655433    3332 2   224655543333332211  1127


Q ss_pred             ccEEEEcccc
Q 044010          126 LDHLVNNAGI  135 (248)
Q Consensus       126 id~vv~~ag~  135 (248)
                      +|++++++|.
T Consensus       210 ~Dvvid~~g~  219 (325)
T 3jyn_A          210 CPVVYDGVGQ  219 (325)
T ss_dssp             EEEEEESSCG
T ss_pred             ceEEEECCCh
Confidence            9999999984

>3o8q_A Shikimate 5-dehydrogenase I alpha; structural genomics, center for structural genomics of infec diseases, csgid; HET: EPE; 1.45A {Vibrio cholerae biovar el tor} PDB: 3sef_A* 3pgj_A* 3o8q_B*

Probab=97.91  E-value=5.6e-05  Score=63.50  Aligned_cols=76  Identities=16%  Similarity=0.270  Sum_probs=59.1

Q ss_pred             cCCCCCEEEEcCCCChHHHHHHHHHHHcCC-eEEEEeCCcchHHHHHHHHHhhCCCcEEEEEccCCCHHHHHHHHHHHHh
Q 044010           43 EDVSGKVVIITGASSGIGEHLAYEYARRGA-CLALCARREKSLEEVADTAREIGSPDVITIRADVSKVDDCRSLVEETMN  121 (248)
Q Consensus        43 ~~~~~k~~lVtGg~~gIG~aia~~l~~~G~-~V~l~~r~~~~~~~~~~~l~~~~~~~v~~~~~D~~~~~~~~~~~~~~~~  121 (248)
                      .++++|+++|+|+ ||.|++++..|++.|+ +|.+.+|+.++.++..+++...+  .+.....+     ++.        
T Consensus       122 ~~l~~k~vlvlGa-Gg~g~aia~~L~~~G~~~v~v~~R~~~~a~~la~~~~~~~--~~~~~~~~-----~l~--------  185 (281)
T 3o8q_A          122 VLLKGATILLIGA-GGAARGVLKPLLDQQPASITVTNRTFAKAEQLAELVAAYG--EVKAQAFE-----QLK--------  185 (281)
T ss_dssp             CCCTTCEEEEECC-SHHHHHHHHHHHTTCCSEEEEEESSHHHHHHHHHHHGGGS--CEEEEEGG-----GCC--------
T ss_pred             CCccCCEEEEECc-hHHHHHHHHHHHhcCCCeEEEEECCHHHHHHHHHHhhccC--CeeEeeHH-----Hhc--------
Confidence            4689999999997 7999999999999997 99999999998888888876543  23333221     110        


Q ss_pred             HcCCccEEEEccccC
Q 044010          122 HFGRLDHLVNNAGIS  136 (248)
Q Consensus       122 ~~g~id~vv~~ag~~  136 (248)
                        ...|++||+.+..
T Consensus       186 --~~aDiIInaTp~g  198 (281)
T 3o8q_A          186 --QSYDVIINSTSAS  198 (281)
T ss_dssp             --SCEEEEEECSCCC
T ss_pred             --CCCCEEEEcCcCC
Confidence              3799999998754

>1hye_A L-lactate/malate dehydrogenase; nucleotide binding domain, oxidoreductase; HET: NAP; 1.90A {Methanocaldococcus jannaschii} SCOP: c.2.1.5 d.162.1.1 PDB: 1hyg_A*

Probab=97.87  E-value=0.00019  Score=61.18  Aligned_cols=147  Identities=16%  Similarity=0.114  Sum_probs=89.8

Q ss_pred             EEEEcCCCChHHHHHHHHHHHcCC--eEEEEeC--CcchHHHHHHHHHhh---CCCcEEEEEccCCCHHHHHHHHHHHHh
Q 044010           49 VVIITGASSGIGEHLAYEYARRGA--CLALCAR--REKSLEEVADTAREI---GSPDVITIRADVSKVDDCRSLVEETMN  121 (248)
Q Consensus        49 ~~lVtGg~~gIG~aia~~l~~~G~--~V~l~~r--~~~~~~~~~~~l~~~---~~~~v~~~~~D~~~~~~~~~~~~~~~~  121 (248)
                      +++||||+|.+|.+++..|+.+|.  ++.+.++  +.++++.....+...   .+..+.+...|  |  ++.       +
T Consensus         2 KI~V~GaaG~vG~~l~~~L~~~~~~~el~L~Di~~~~~~~~~~~~dl~~~~~~~~~~~~i~~~~--d--~l~-------~   70 (313)
T 1hye_A            2 KVTIIGASGRVGSATALLLAKEPFMKDLVLIGREHSINKLEGLREDIYDALAGTRSDANIYVES--D--ENL-------R   70 (313)
T ss_dssp             EEEEETTTSHHHHHHHHHHHTCTTCCEEEEEECGGGHHHHHHHHHHHHHHHTTSCCCCEEEEEE--T--TCG-------G
T ss_pred             EEEEECCCChhHHHHHHHHHhCCCCCEEEEEcCCCchhhhHHHHHHHHHhHHhcCCCeEEEeCC--c--chH-------H
Confidence            689999999999999999998885  6888888  654444433333321   11122222211  0  111       2


Q ss_pred             HcCCccEEEEccccCCcccccccCChHHHHHHHHhhhHHHHHHHHHHhhhhhhcCCeEEEEcCcccc--------ccCCC
Q 044010          122 HFGRLDHLVNNAGISSVALFEDIVNITDFKQIMNINFWGSVYTTRFAVPHLRYTKGKIVVLSSAASW--------LTAPR  193 (248)
Q Consensus       122 ~~g~id~vv~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~g~iV~isS~~~~--------~~~~~  193 (248)
                      .+.+.|++||.||......    .+   -...+..|+.....+++.+...-   ++.++++|.-...        .+.|.
T Consensus        71 al~gaD~Vi~~Ag~~~~~g----~~---r~dl~~~N~~i~~~i~~~i~~~~---~~~vlv~SNPv~~~t~~~~k~~~~p~  140 (313)
T 1hye_A           71 IIDESDVVIITSGVPRKEG----MS---RMDLAKTNAKIVGKYAKKIAEIC---DTKIFVITNPVDVMTYKALVDSKFER  140 (313)
T ss_dssp             GGTTCSEEEECCSCCCCTT----CC---HHHHHHHHHHHHHHHHHHHHHHC---CCEEEECSSSHHHHHHHHHHHHCCCT
T ss_pred             HhCCCCEEEECCCCCCCCC----Cc---HHHHHHHHHHHHHHHHHHHHHhC---CeEEEEecCcHHHHHHHHHHhhCcCh
Confidence            2347999999999753221    12   23458889999888888876542   4455555442221        12344


Q ss_pred             CccchH-HHHHHHHHHHHHHHHhC
Q 044010          194 MSFYNA-SKAALVLFFETLRVELG  216 (248)
Q Consensus       194 ~~~Y~~-sKaal~~l~~~la~~~~  216 (248)
                      .-.++. +..--..+...++..++
T Consensus       141 ~rviG~gt~LD~~r~~~~la~~lg  164 (313)
T 1hye_A          141 NQVFGLGTHLDSLRFKVAIAKFFG  164 (313)
T ss_dssp             TSEEECTTHHHHHHHHHHHHHHHT
T ss_pred             hcEEEeCccHHHHHHHHHHHHHhC
Confidence            456776 66556677777777775

>4a0s_A Octenoyl-COA reductase/carboxylase; oxidoreductase, transferase, cinnabaramide PKS biosynthesis; HET: CO8 NAP; 1.90A {Streptomyces SP} PDB: 4a10_A

Probab=97.87  E-value=4.9e-05  Score=67.89  Aligned_cols=87  Identities=23%  Similarity=0.318  Sum_probs=59.5

Q ss_pred             CCCCEEEEcCCCChHHHHHHHHHHHcCCeEEEEeCCcchHHHHHHHHHhhCCCcEEE-EEccCC---------CHHHHHH
Q 044010           45 VSGKVVIITGASSGIGEHLAYEYARRGACLALCARREKSLEEVADTAREIGSPDVIT-IRADVS---------KVDDCRS  114 (248)
Q Consensus        45 ~~~k~~lVtGg~~gIG~aia~~l~~~G~~V~l~~r~~~~~~~~~~~l~~~~~~~v~~-~~~D~~---------~~~~~~~  114 (248)
                      -.|++++|+|++|+||...++.+...|++|+++++++++.+.+    ++.+...+.- -..|+.         +.++.++
T Consensus       219 ~~g~~VlV~GasG~iG~~a~qla~~~Ga~vi~~~~~~~~~~~~----~~lGa~~~i~~~~~~~~~~~~~~~~~~~~~~~~  294 (447)
T 4a0s_A          219 KQGDIVLIWGASGGLGSYAIQFVKNGGGIPVAVVSSAQKEAAV----RALGCDLVINRAELGITDDIADDPRRVVETGRK  294 (447)
T ss_dssp             CTTCEEEETTTTSHHHHHHHHHHHHTTCEEEEEESSHHHHHHH----HHTTCCCEEEHHHHTCCTTGGGCHHHHHHHHHH
T ss_pred             CCCCEEEEECCCCHHHHHHHHHHHHcCCEEEEEeCCHHHHHHH----HhcCCCEEEecccccccccccccccccchhhhH
Confidence            3689999999999999999988888999999999877665543    3334322211 112222         1234455


Q ss_pred             HHHHHHhHcC-CccEEEEcccc
Q 044010          115 LVEETMNHFG-RLDHLVNNAGI  135 (248)
Q Consensus       115 ~~~~~~~~~g-~id~vv~~ag~  135 (248)
                      +.+++.+..| .+|++++++|.
T Consensus       295 ~~~~v~~~~g~g~Dvvid~~G~  316 (447)
T 4a0s_A          295 LAKLVVEKAGREPDIVFEHTGR  316 (447)
T ss_dssp             HHHHHHHHHSSCCSEEEECSCH
T ss_pred             HHHHHHHHhCCCceEEEECCCc
Confidence            5666666544 69999999883

>3pwz_A Shikimate dehydrogenase 3; alpha-beta, oxidoreductase; 1.71A {Pseudomonas putida}

Probab=97.85  E-value=4.2e-05  Score=63.96  Aligned_cols=76  Identities=16%  Similarity=0.206  Sum_probs=57.9

Q ss_pred             cCCCCCEEEEcCCCChHHHHHHHHHHHcCC-eEEEEeCCcchHHHHHHHHHhhCCCcEEEEEccCCCHHHHHHHHHHHHh
Q 044010           43 EDVSGKVVIITGASSGIGEHLAYEYARRGA-CLALCARREKSLEEVADTAREIGSPDVITIRADVSKVDDCRSLVEETMN  121 (248)
Q Consensus        43 ~~~~~k~~lVtGg~~gIG~aia~~l~~~G~-~V~l~~r~~~~~~~~~~~l~~~~~~~v~~~~~D~~~~~~~~~~~~~~~~  121 (248)
                      .++++|+++|+|+ ||.|++++..|++.|+ +|.+.+|+.++.++..+++.. +  .+...  +..+   +.       +
T Consensus       116 ~~l~~k~~lvlGa-Gg~~~aia~~L~~~G~~~v~i~~R~~~~a~~la~~~~~-~--~~~~~--~~~~---l~-------~  179 (272)
T 3pwz_A          116 EPLRNRRVLLLGA-GGAVRGALLPFLQAGPSELVIANRDMAKALALRNELDH-S--RLRIS--RYEA---LE-------G  179 (272)
T ss_dssp             CCCTTSEEEEECC-SHHHHHHHHHHHHTCCSEEEEECSCHHHHHHHHHHHCC-T--TEEEE--CSGG---GT-------T
T ss_pred             CCccCCEEEEECc-cHHHHHHHHHHHHcCCCEEEEEeCCHHHHHHHHHHhcc-C--CeeEe--eHHH---hc-------c
Confidence            4688999999997 7999999999999996 999999999888888877754 2  33333  2211   11       1


Q ss_pred             HcCCccEEEEccccC
Q 044010          122 HFGRLDHLVNNAGIS  136 (248)
Q Consensus       122 ~~g~id~vv~~ag~~  136 (248)
                        .+.|++||+.+..
T Consensus       180 --~~~DivInaTp~g  192 (272)
T 3pwz_A          180 --QSFDIVVNATSAS  192 (272)
T ss_dssp             --CCCSEEEECSSGG
T ss_pred             --cCCCEEEECCCCC
Confidence              3799999998654

>4eye_A Probable oxidoreductase; structural genomics, niaid, national institute of allergy AN infectious diseases; 2.10A {Mycobacterium abscessus}

Probab=97.85  E-value=5e-05  Score=65.42  Aligned_cols=79  Identities=23%  Similarity=0.285  Sum_probs=54.6

Q ss_pred             CCCEEEEcCCCChHHHHHHHHHHHcCCeEEEEeCCcchHHHHHHHHHhhCCCcEEEEEccCCCHHHHHHHHHHHHhHcCC
Q 044010           46 SGKVVIITGASSGIGEHLAYEYARRGACLALCARREKSLEEVADTAREIGSPDVITIRADVSKVDDCRSLVEETMNHFGR  125 (248)
Q Consensus        46 ~~k~~lVtGg~~gIG~aia~~l~~~G~~V~l~~r~~~~~~~~~~~l~~~~~~~v~~~~~D~~~~~~~~~~~~~~~~~~g~  125 (248)
                      .|+++||+|++|++|..+++.+...|++|+.+++++++.+.+.+    .+...  .  .|..  +++.+.+.+... ..+
T Consensus       159 ~g~~VlV~Gasg~iG~~~~~~a~~~Ga~Vi~~~~~~~~~~~~~~----~ga~~--v--~~~~--~~~~~~v~~~~~-~~g  227 (342)
T 4eye_A          159 AGETVLVLGAAGGIGTAAIQIAKGMGAKVIAVVNRTAATEFVKS----VGADI--V--LPLE--EGWAKAVREATG-GAG  227 (342)
T ss_dssp             TTCEEEESSTTSHHHHHHHHHHHHTTCEEEEEESSGGGHHHHHH----HTCSE--E--EESS--TTHHHHHHHHTT-TSC
T ss_pred             CCCEEEEECCCCHHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHh----cCCcE--E--ecCc--hhHHHHHHHHhC-CCC
Confidence            68999999999999999999998999999999998877654332    33322  2  2443  333333332211 126


Q ss_pred             ccEEEEcccc
Q 044010          126 LDHLVNNAGI  135 (248)
Q Consensus       126 id~vv~~ag~  135 (248)
                      +|++++++|.
T Consensus       228 ~Dvvid~~g~  237 (342)
T 4eye_A          228 VDMVVDPIGG  237 (342)
T ss_dssp             EEEEEESCC-
T ss_pred             ceEEEECCch
Confidence            9999999984

>1pjc_A Protein (L-alanine dehydrogenase); oxidoreductase, NAD; HET: NAD; 2.00A {Phormidium lapideum} SCOP: c.2.1.4 c.23.12.2 PDB: 1pjb_A* 1say_A

Probab=97.83  E-value=8.8e-05  Score=64.54  Aligned_cols=79  Identities=18%  Similarity=0.133  Sum_probs=57.3

Q ss_pred             CCCCCEEEEcCCCChHHHHHHHHHHHcCCeEEEEeCCcchHHHHHHHHHhhCCCcEEEEEccCCCHHHHHHHHHHHHhHc
Q 044010           44 DVSGKVVIITGASSGIGEHLAYEYARRGACLALCARREKSLEEVADTAREIGSPDVITIRADVSKVDDCRSLVEETMNHF  123 (248)
Q Consensus        44 ~~~~k~~lVtGg~~gIG~aia~~l~~~G~~V~l~~r~~~~~~~~~~~l~~~~~~~v~~~~~D~~~~~~~~~~~~~~~~~~  123 (248)
                      .+++++++|+|+ |++|+++++.+...|++|++.+|++++++...+....    .+..   +..+.+++.+.+       
T Consensus       164 ~l~~~~VlViGa-GgvG~~aa~~a~~~Ga~V~v~dr~~~r~~~~~~~~~~----~~~~---~~~~~~~~~~~~-------  228 (361)
T 1pjc_A          164 GVKPGKVVILGG-GVVGTEAAKMAVGLGAQVQIFDINVERLSYLETLFGS----RVEL---LYSNSAEIETAV-------  228 (361)
T ss_dssp             TBCCCEEEEECC-SHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHGG----GSEE---EECCHHHHHHHH-------
T ss_pred             CCCCCEEEEECC-CHHHHHHHHHHHhCCCEEEEEeCCHHHHHHHHHhhCc----eeEe---eeCCHHHHHHHH-------
Confidence            467899999999 9999999999999999999999998877666544321    2211   223344443332       


Q ss_pred             CCccEEEEccccCC
Q 044010          124 GRLDHLVNNAGISS  137 (248)
Q Consensus       124 g~id~vv~~ag~~~  137 (248)
                      .+.|++|++++...
T Consensus       229 ~~~DvVI~~~~~~~  242 (361)
T 1pjc_A          229 AEADLLIGAVLVPG  242 (361)
T ss_dssp             HTCSEEEECCCCTT
T ss_pred             cCCCEEEECCCcCC
Confidence            27999999998643

>1jw9_B Molybdopterin biosynthesis MOEB protein; MOEB: modified rossmann fold, (2) Cys-X-X-Cys zinc-binding M MOAD: ubiquitin-like fold; 1.70A {Escherichia coli} SCOP: c.111.1.1 PDB: 1jwa_B* 1jwb_B*

Probab=97.78  E-value=0.00011  Score=60.70  Aligned_cols=83  Identities=19%  Similarity=0.282  Sum_probs=63.3

Q ss_pred             cCCCCCEEEEcCCCChHHHHHHHHHHHcCC-eEEEEeCCc-------------------chHHHHHHHHHhhCC-CcEEE
Q 044010           43 EDVSGKVVIITGASSGIGEHLAYEYARRGA-CLALCARRE-------------------KSLEEVADTAREIGS-PDVIT  101 (248)
Q Consensus        43 ~~~~~k~~lVtGg~~gIG~aia~~l~~~G~-~V~l~~r~~-------------------~~~~~~~~~l~~~~~-~~v~~  101 (248)
                      .++++++++|.|+ ||+|.++++.|+..|. ++.+++++.                   .+.+.+.+.+++..+ .++..
T Consensus        27 ~~l~~~~VlVvG~-Gg~G~~va~~La~~Gv~~i~lvD~d~v~~sNl~Rq~l~~~~diG~~Ka~~~~~~l~~~np~~~v~~  105 (249)
T 1jw9_B           27 EALKDSRVLIVGL-GGLGCAASQYLASAGVGNLTLLDFDTVSLSNLQRQTLHSDATVGQPKVESARDALTRINPHIAITP  105 (249)
T ss_dssp             HHHHHCEEEEECC-SHHHHHHHHHHHHHTCSEEEEECCCBCCGGGGGTCTTCCGGGTTSBHHHHHHHHHHHHCTTSEEEE
T ss_pred             HHHhCCeEEEEee-CHHHHHHHHHHHHcCCCeEEEEcCCCcccccCCcccccChhhcCcHHHHHHHHHHHHHCCCcEEEE
Confidence            3578899999986 7999999999999997 899999987                   788888888877654 24556


Q ss_pred             EEccCCCHHHHHHHHHHHHhHcCCccEEEEccc
Q 044010          102 IRADVSKVDDCRSLVEETMNHFGRLDHLVNNAG  134 (248)
Q Consensus       102 ~~~D~~~~~~~~~~~~~~~~~~g~id~vv~~ag  134 (248)
                      +..++++ +.+.+++       .+.|++|.+..
T Consensus       106 ~~~~~~~-~~~~~~~-------~~~DvVi~~~d  130 (249)
T 1jw9_B          106 VNALLDD-AELAALI-------AEHDLVLDCTD  130 (249)
T ss_dssp             ECSCCCH-HHHHHHH-------HTSSEEEECCS
T ss_pred             EeccCCH-hHHHHHH-------hCCCEEEEeCC
Confidence            6666653 3333333       36899998853

>3pi7_A NADH oxidoreductase; groes-like fold, NAD(P)-binding rossmann fold, structural GE joint center for structural genomics, JCSG; HET: MSE; 1.71A {Mesorhizobium loti}

Probab=97.78  E-value=0.00012  Score=63.18  Aligned_cols=80  Identities=14%  Similarity=0.173  Sum_probs=55.7

Q ss_pred             CCCEEEEcCCCChHHHHHHHHHHHcCCeEEEEeCCcchHHHHHHHHHhhCCCcEEEEEccCCCHHHHHHHHHHHHhHcCC
Q 044010           46 SGKVVIITGASSGIGEHLAYEYARRGACLALCARREKSLEEVADTAREIGSPDVITIRADVSKVDDCRSLVEETMNHFGR  125 (248)
Q Consensus        46 ~~k~~lVtGg~~gIG~aia~~l~~~G~~V~l~~r~~~~~~~~~~~l~~~~~~~v~~~~~D~~~~~~~~~~~~~~~~~~g~  125 (248)
                      .+++++|+||+|++|...++.+...|++|+.+++++++.+.+.    +.+..    ...|.++.+ +.+.+.+.... ..
T Consensus       164 g~~~vli~gg~g~vG~~a~qla~~~Ga~Vi~~~~~~~~~~~~~----~~Ga~----~~~~~~~~~-~~~~v~~~~~~-~g  233 (349)
T 3pi7_A          164 GEKAFVMTAGASQLCKLIIGLAKEEGFRPIVTVRRDEQIALLK----DIGAA----HVLNEKAPD-FEATLREVMKA-EQ  233 (349)
T ss_dssp             CCSEEEESSTTSHHHHHHHHHHHHHTCEEEEEESCGGGHHHHH----HHTCS----EEEETTSTT-HHHHHHHHHHH-HC
T ss_pred             CCCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHH----HcCCC----EEEECCcHH-HHHHHHHHhcC-CC
Confidence            3589999999999999999888888999999999888766543    33322    224555543 33333332221 27


Q ss_pred             ccEEEEcccc
Q 044010          126 LDHLVNNAGI  135 (248)
Q Consensus       126 id~vv~~ag~  135 (248)
                      +|++++++|.
T Consensus       234 ~D~vid~~g~  243 (349)
T 3pi7_A          234 PRIFLDAVTG  243 (349)
T ss_dssp             CCEEEESSCH
T ss_pred             CcEEEECCCC
Confidence            9999999874

>2c0c_A Zinc binding alcohol dehydrogenase, domain containing 2; oxidoreductase, quinone oxidoreductase, medium-chain dehydrogenase/reductase; HET: NAP; 1.45A {Homo sapiens} PDB: 2x1h_A* 2x7h_A* 2wek_A*

Probab=97.76  E-value=8e-05  Score=64.66  Aligned_cols=78  Identities=14%  Similarity=0.227  Sum_probs=54.7

Q ss_pred             CCCEEEEcCCCChHHHHHHHHHHHcCCeEEEEeCCcchHHHHHHHHHhhCCCcEEEEEccCCCHHHHHHHHHHHHhHcCC
Q 044010           46 SGKVVIITGASSGIGEHLAYEYARRGACLALCARREKSLEEVADTAREIGSPDVITIRADVSKVDDCRSLVEETMNHFGR  125 (248)
Q Consensus        46 ~~k~~lVtGg~~gIG~aia~~l~~~G~~V~l~~r~~~~~~~~~~~l~~~~~~~v~~~~~D~~~~~~~~~~~~~~~~~~g~  125 (248)
                      .|++++|+||+|++|..+++.+...|++|+.+++++++.+.+    ++.+. .   ...|.++. ++.+.+.+..  .+.
T Consensus       163 ~g~~VlV~Ga~G~iG~~~~q~a~~~Ga~Vi~~~~~~~~~~~~----~~~Ga-~---~~~~~~~~-~~~~~~~~~~--~~g  231 (362)
T 2c0c_A          163 EGKKVLVTAAAGGTGQFAMQLSKKAKCHVIGTCSSDEKSAFL----KSLGC-D---RPINYKTE-PVGTVLKQEY--PEG  231 (362)
T ss_dssp             TTCEEEETTTTBTTHHHHHHHHHHTTCEEEEEESSHHHHHHH----HHTTC-S---EEEETTTS-CHHHHHHHHC--TTC
T ss_pred             CCCEEEEeCCCcHHHHHHHHHHHhCCCEEEEEECCHHHHHHH----HHcCC-c---EEEecCCh-hHHHHHHHhc--CCC
Confidence            589999999999999999999888999999999987655443    33332 2   12355443 2333333321  137


Q ss_pred             ccEEEEccc
Q 044010          126 LDHLVNNAG  134 (248)
Q Consensus       126 id~vv~~ag  134 (248)
                      +|++|+++|
T Consensus       232 ~D~vid~~g  240 (362)
T 2c0c_A          232 VDVVYESVG  240 (362)
T ss_dssp             EEEEEECSC
T ss_pred             CCEEEECCC
Confidence            999999987

>1yqd_A Sinapyl alcohol dehydrogenase; lignin, monolignol, oxidoreductase, zinc-dependent, plant DE biosynthesis, substrate inhibition; HET: NAP; 1.65A {Populus tremuloides} PDB: 1yqx_A*

Probab=97.74  E-value=6.5e-05  Score=65.36  Aligned_cols=75  Identities=19%  Similarity=0.252  Sum_probs=54.7

Q ss_pred             CCCEEEEcCCCChHHHHHHHHHHHcCCeEEEEeCCcchHHHHHHHHHhhCCCcEEEEEccCCCHHHHHHHHHHHHhHcCC
Q 044010           46 SGKVVIITGASSGIGEHLAYEYARRGACLALCARREKSLEEVADTAREIGSPDVITIRADVSKVDDCRSLVEETMNHFGR  125 (248)
Q Consensus        46 ~~k~~lVtGg~~gIG~aia~~l~~~G~~V~l~~r~~~~~~~~~~~l~~~~~~~v~~~~~D~~~~~~~~~~~~~~~~~~g~  125 (248)
                      .|++++|+|+ |++|...++.+...|++|+++++++++.+...+   +.+. .   ...|.++.+.+.       +..+.
T Consensus       187 ~g~~VlV~Ga-G~vG~~~~q~a~~~Ga~Vi~~~~~~~~~~~~~~---~lGa-~---~v~~~~~~~~~~-------~~~~~  251 (366)
T 1yqd_A          187 PGKHIGIVGL-GGLGHVAVKFAKAFGSKVTVISTSPSKKEEALK---NFGA-D---SFLVSRDQEQMQ-------AAAGT  251 (366)
T ss_dssp             TTCEEEEECC-SHHHHHHHHHHHHTTCEEEEEESCGGGHHHHHH---TSCC-S---EEEETTCHHHHH-------HTTTC
T ss_pred             CCCEEEEECC-CHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHH---hcCC-c---eEEeccCHHHHH-------HhhCC
Confidence            6899999996 999999999888899999999998877654432   2232 2   224666654332       22357


Q ss_pred             ccEEEEcccc
Q 044010          126 LDHLVNNAGI  135 (248)
Q Consensus       126 id~vv~~ag~  135 (248)
                      +|++|+++|.
T Consensus       252 ~D~vid~~g~  261 (366)
T 1yqd_A          252 LDGIIDTVSA  261 (366)
T ss_dssp             EEEEEECCSS
T ss_pred             CCEEEECCCc
Confidence            9999999985

>1o6z_A MDH, malate dehydrogenase; halophilic, ION-binding, protein-solvent interaction, oxidoreductase; HET: NAD; 1.95A {Haloarcula marismortui} SCOP: c.2.1.5 d.162.1.1 PDB: 1gt2_A* 2x0r_A* 2j5k_A 2j5q_A 2j5r_A 1d3a_A 1hlp_A* 2hlp_A

Probab=97.73  E-value=0.0004  Score=58.91  Aligned_cols=145  Identities=14%  Similarity=0.024  Sum_probs=85.4

Q ss_pred             EEEEcCCCChHHHHHHHHHHHcCC--eEEEEeC--CcchHHHHHHHHHhh--CCCcEEEEEccCCCHHHHHHHHHHHHhH
Q 044010           49 VVIITGASSGIGEHLAYEYARRGA--CLALCAR--REKSLEEVADTAREI--GSPDVITIRADVSKVDDCRSLVEETMNH  122 (248)
Q Consensus        49 ~~lVtGg~~gIG~aia~~l~~~G~--~V~l~~r--~~~~~~~~~~~l~~~--~~~~v~~~~~D~~~~~~~~~~~~~~~~~  122 (248)
                      +++||||+|.+|.+++..|+.+|.  ++++.++  +.++++.....+...  ....+.+.. |  +.+           .
T Consensus         2 KI~IiGAaG~vG~~l~~~L~~~~~~~el~L~Di~~~~~~~~~~~~dl~~~~~~~~~~~v~~-~--~~~-----------a   67 (303)
T 1o6z_A            2 KVSVVGAAGTVGAAAGYNIALRDIADEVVFVDIPDKEDDTVGQAADTNHGIAYDSNTRVRQ-G--GYE-----------D   67 (303)
T ss_dssp             EEEEETTTSHHHHHHHHHHHHTTCCSEEEEECCGGGHHHHHHHHHHHHHHHTTTCCCEEEE-C--CGG-----------G
T ss_pred             EEEEECCCChHHHHHHHHHHhCCCCCEEEEEcCCCChhhHHHHHHHHHHHHhhCCCcEEEe-C--CHH-----------H
Confidence            689999999999999999998875  6999998  665554434444432  112333332 2  222           2


Q ss_pred             cCCccEEEEccccCCcccccccCChHHHHHHHHhhhHHHHHHHHHHhhhhhhcCCeEEEEcCcccc--------ccCCCC
Q 044010          123 FGRLDHLVNNAGISSVALFEDIVNITDFKQIMNINFWGSVYTTRFAVPHLRYTKGKIVVLSSAASW--------LTAPRM  194 (248)
Q Consensus       123 ~g~id~vv~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~g~iV~isS~~~~--------~~~~~~  194 (248)
                      +.+.|++|+.||......    .+   -.+.+..|+.....+.+.+...-  .++.++++|.-...        .+.|..
T Consensus        68 ~~~aDvVi~~ag~~~~~g----~~---r~dl~~~N~~i~~~i~~~i~~~~--p~~~viv~SNPv~~~~~~~~~~~~~p~~  138 (303)
T 1o6z_A           68 TAGSDVVVITAGIPRQPG----QT---RIDLAGDNAPIMEDIQSSLDEHN--DDYISLTTSNPVDLLNRHLYEAGDRSRE  138 (303)
T ss_dssp             GTTCSEEEECCCCCCCTT----CC---HHHHHHHHHHHHHHHHHHHHTTC--SCCEEEECCSSHHHHHHHHHHHSSSCGG
T ss_pred             hCCCCEEEEcCCCCCCCC----CC---HHHHHHHHHHHHHHHHHHHHHHC--CCcEEEEeCChHHHHHHHHHHHcCCCHH
Confidence            347999999999653221    12   23457888888888887776541  23455554332221        122322


Q ss_pred             ccchH-HHHHHHHHHHHHHHHhC
Q 044010          195 SFYNA-SKAALVLFFETLRVELG  216 (248)
Q Consensus       195 ~~Y~~-sKaal~~l~~~la~~~~  216 (248)
                      -..+. +--=-..+-..++..++
T Consensus       139 rviG~gt~Ld~~r~~~~la~~l~  161 (303)
T 1o6z_A          139 QVIGFGGRLDSARFRYVLSEEFD  161 (303)
T ss_dssp             GEEECCHHHHHHHHHHHHHHHHT
T ss_pred             HeeecccchhHHHHHHHHHHHhC
Confidence            34444 33223455666666664

>3c85_A Putative glutathione-regulated potassium-efflux S protein KEFB; TRKA domain; HET: AMP; 1.90A {Vibrio parahaemolyticus rimd 2210633}

Probab=97.73  E-value=5.7e-05  Score=58.93  Aligned_cols=79  Identities=19%  Similarity=0.143  Sum_probs=57.7

Q ss_pred             cCCCCCEEEEcCCCChHHHHHHHHHHHc-CCeEEEEeCCcchHHHHHHHHHhhCCCcEEEEEccCCCHHHHHHHHHHHHh
Q 044010           43 EDVSGKVVIITGASSGIGEHLAYEYARR-GACLALCARREKSLEEVADTAREIGSPDVITIRADVSKVDDCRSLVEETMN  121 (248)
Q Consensus        43 ~~~~~k~~lVtGg~~gIG~aia~~l~~~-G~~V~l~~r~~~~~~~~~~~l~~~~~~~v~~~~~D~~~~~~~~~~~~~~~~  121 (248)
                      .++.+++++|.|+ |.+|..+++.|.++ |++|+++++++++.+..    ++.   .+..+..|.++.+.+.++     .
T Consensus        35 ~~~~~~~v~IiG~-G~~G~~~a~~L~~~~g~~V~vid~~~~~~~~~----~~~---g~~~~~gd~~~~~~l~~~-----~  101 (183)
T 3c85_A           35 INPGHAQVLILGM-GRIGTGAYDELRARYGKISLGIEIREEAAQQH----RSE---GRNVISGDATDPDFWERI-----L  101 (183)
T ss_dssp             BCCTTCSEEEECC-SHHHHHHHHHHHHHHCSCEEEEESCHHHHHHH----HHT---TCCEEECCTTCHHHHHTB-----C
T ss_pred             cCCCCCcEEEECC-CHHHHHHHHHHHhccCCeEEEEECCHHHHHHH----HHC---CCCEEEcCCCCHHHHHhc-----c
Confidence            3566778888884 99999999999999 99999999998665443    322   244677899887654432     0


Q ss_pred             HcCCccEEEEccc
Q 044010          122 HFGRLDHLVNNAG  134 (248)
Q Consensus       122 ~~g~id~vv~~ag  134 (248)
                      ...+.|.+|.+.+
T Consensus       102 ~~~~ad~vi~~~~  114 (183)
T 3c85_A          102 DTGHVKLVLLAMP  114 (183)
T ss_dssp             SCCCCCEEEECCS
T ss_pred             CCCCCCEEEEeCC
Confidence            1347899988764

>3fwz_A Inner membrane protein YBAL; TRKA-N domain, E.coli, structural genomics, PSI-2, Pro structure initiative; HET: MSE AMP; 1.79A {Escherichia coli k-12}

Probab=97.72  E-value=0.00016  Score=54.00  Aligned_cols=77  Identities=13%  Similarity=0.182  Sum_probs=57.3

Q ss_pred             cCCCCCEEEEcCCCChHHHHHHHHHHHcCCeEEEEeCCcchHHHHHHHHHhhCCCcEEEEEccCCCHHHHHHHHHHHHhH
Q 044010           43 EDVSGKVVIITGASSGIGEHLAYEYARRGACLALCARREKSLEEVADTAREIGSPDVITIRADVSKVDDCRSLVEETMNH  122 (248)
Q Consensus        43 ~~~~~k~~lVtGg~~gIG~aia~~l~~~G~~V~l~~r~~~~~~~~~~~l~~~~~~~v~~~~~D~~~~~~~~~~~~~~~~~  122 (248)
                      .++++ +++|.|+ |.+|..+++.|.++|++|+++++++++.+...    +.   .+..+..|.++.+.++++      .
T Consensus         4 ~~~~~-~viIiG~-G~~G~~la~~L~~~g~~v~vid~~~~~~~~~~----~~---g~~~i~gd~~~~~~l~~a------~   68 (140)
T 3fwz_A            4 VDICN-HALLVGY-GRVGSLLGEKLLASDIPLVVIETSRTRVDELR----ER---GVRAVLGNAANEEIMQLA------H   68 (140)
T ss_dssp             CCCCS-CEEEECC-SHHHHHHHHHHHHTTCCEEEEESCHHHHHHHH----HT---TCEEEESCTTSHHHHHHT------T
T ss_pred             ccCCC-CEEEECc-CHHHHHHHHHHHHCCCCEEEEECCHHHHHHHH----Hc---CCCEEECCCCCHHHHHhc------C
Confidence            45655 5666776 88999999999999999999999987655433    22   456788999999866553      1


Q ss_pred             cCCccEEEEccc
Q 044010          123 FGRLDHLVNNAG  134 (248)
Q Consensus       123 ~g~id~vv~~ag  134 (248)
                      ..+.|.+|.+.+
T Consensus        69 i~~ad~vi~~~~   80 (140)
T 3fwz_A           69 LECAKWLILTIP   80 (140)
T ss_dssp             GGGCSEEEECCS
T ss_pred             cccCCEEEEECC
Confidence            236888887754

>3h8v_A Ubiquitin-like modifier-activating enzyme 5; rossman fold, ATP-binding, UBL conjugation pathway, transfer structural genomics consortium, SGC; HET: ATP; 2.00A {Homo sapiens} PDB: 3guc_A*

Probab=97.71  E-value=0.00031  Score=59.25  Aligned_cols=90  Identities=19%  Similarity=0.268  Sum_probs=69.1

Q ss_pred             cCCCCCEEEEcCCCChHHHHHHHHHHHcCC-eEEEEeCCc------------------chHHHHHHHHHhhCC-CcEEEE
Q 044010           43 EDVSGKVVIITGASSGIGEHLAYEYARRGA-CLALCARRE------------------KSLEEVADTAREIGS-PDVITI  102 (248)
Q Consensus        43 ~~~~~k~~lVtGg~~gIG~aia~~l~~~G~-~V~l~~r~~------------------~~~~~~~~~l~~~~~-~~v~~~  102 (248)
                      .++++++++|.|+ ||+|..+++.|+..|. ++.++|++.                  .|.+.+.+.+++.++ .++..+
T Consensus        32 ~kL~~~~VlVvGa-GGlGs~va~~La~aGVG~i~lvD~D~Ve~sNL~Rq~~~~~diG~~Ka~aa~~~L~~iNP~v~v~~~  110 (292)
T 3h8v_A           32 EKIRTFAVAIVGV-GGVGSVTAEMLTRCGIGKLLLFDYDKVELANMNRLFFQPHQAGLSKVQAAEHTLRNINPDVLFEVH  110 (292)
T ss_dssp             CGGGGCEEEEECC-SHHHHHHHHHHHHHTCSEEEEECCCBC------------CCTTSBHHHHHHHHHHHHCTTSEEEEE
T ss_pred             HHHhCCeEEEECc-CHHHHHHHHHHHHcCCCEEEEECCCccChhhcccccCChhhcCchHHHHHHHHHHhhCCCcEEEEe
Confidence            4678899999977 8999999999999997 999999876                  577777788877764 356677


Q ss_pred             EccCCCHHHHHHHHHHHHhH-c---CCccEEEEcc
Q 044010          103 RADVSKVDDCRSLVEETMNH-F---GRLDHLVNNA  133 (248)
Q Consensus       103 ~~D~~~~~~~~~~~~~~~~~-~---g~id~vv~~a  133 (248)
                      ..++++.+.++++++.+... +   .+.|+||.+.
T Consensus       111 ~~~l~~~~~~~~~~~~~~~~~l~~~~~~DlVid~~  145 (292)
T 3h8v_A          111 NYNITTVENFQHFMDRISNGGLEEGKPVDLVLSCV  145 (292)
T ss_dssp             CCCTTSHHHHHHHHHHHHHBSSSTTBCCSEEEECC
T ss_pred             cccCCcHHHHHHHhhhhcccccccCCCCCEEEECC
Confidence            77888777777776554321 1   3689998764

>3krt_A Crotonyl COA reductase; structural genomics, protein structure initiative, NYSGXRC, PSI-2; 2.19A {Streptomyces coelicolor} PDB: 3hzz_A

Probab=97.68  E-value=0.00014  Score=65.20  Aligned_cols=87  Identities=20%  Similarity=0.248  Sum_probs=60.7

Q ss_pred             CCCCEEEEcCCCChHHHHHHHHHHHcCCeEEEEeCCcchHHHHHHHHHhhCCCcEEEE-Ecc--------CCCHHHHHHH
Q 044010           45 VSGKVVIITGASSGIGEHLAYEYARRGACLALCARREKSLEEVADTAREIGSPDVITI-RAD--------VSKVDDCRSL  115 (248)
Q Consensus        45 ~~~k~~lVtGg~~gIG~aia~~l~~~G~~V~l~~r~~~~~~~~~~~l~~~~~~~v~~~-~~D--------~~~~~~~~~~  115 (248)
                      -.|++++|+|++|++|...++.+...|++|+++++++++.+.+    ++.+...+.-. ..|        ..+.++.+++
T Consensus       227 ~~g~~VlV~GasG~vG~~avqlak~~Ga~vi~~~~~~~~~~~~----~~lGa~~vi~~~~~d~~~~~~~~~~~~~~~~~~  302 (456)
T 3krt_A          227 KQGDNVLIWGASGGLGSYATQFALAGGANPICVVSSPQKAEIC----RAMGAEAIIDRNAEGYRFWKDENTQDPKEWKRF  302 (456)
T ss_dssp             CTTCEEEETTTTSHHHHHHHHHHHHTTCEEEEEESSHHHHHHH----HHHTCCEEEETTTTTCCSEEETTEECHHHHHHH
T ss_pred             CCCCEEEEECCCCHHHHHHHHHHHHcCCeEEEEECCHHHHHHH----HhhCCcEEEecCcCcccccccccccchHHHHHH
Confidence            3688999999999999999988888999999999877655543    33343221110 111        2345666677


Q ss_pred             HHHHHhHcC--CccEEEEcccc
Q 044010          116 VEETMNHFG--RLDHLVNNAGI  135 (248)
Q Consensus       116 ~~~~~~~~g--~id~vv~~ag~  135 (248)
                      .+++.+..+  .+|+++.++|.
T Consensus       303 ~~~i~~~t~g~g~Dvvid~~G~  324 (456)
T 3krt_A          303 GKRIRELTGGEDIDIVFEHPGR  324 (456)
T ss_dssp             HHHHHHHHTSCCEEEEEECSCH
T ss_pred             HHHHHHHhCCCCCcEEEEcCCc
Confidence            777776543  79999999873

>3fbg_A Putative arginate lyase; structural genomics, unknown function, PSI-2, protein structure initiative; 1.60A {Staphylococcus haemolyticus}

Probab=97.65  E-value=0.00022  Score=61.41  Aligned_cols=78  Identities=14%  Similarity=0.176  Sum_probs=54.4

Q ss_pred             CCCEEEEcCCCChHHHHHHHHHHHcCCeEEEEeCCcchHHHHHHHHHhhCCCcEEEEEccCCCHHHHHHHHHHHHhHcCC
Q 044010           46 SGKVVIITGASSGIGEHLAYEYARRGACLALCARREKSLEEVADTAREIGSPDVITIRADVSKVDDCRSLVEETMNHFGR  125 (248)
Q Consensus        46 ~~k~~lVtGg~~gIG~aia~~l~~~G~~V~l~~r~~~~~~~~~~~l~~~~~~~v~~~~~D~~~~~~~~~~~~~~~~~~g~  125 (248)
                      +|++++|+||+|++|...++.+...|++|+.+++++++.+.+.    +.+.+.    ..|..+  ++.+.+.+.  ..+.
T Consensus       150 ~g~~VlV~gg~G~vG~~a~qla~~~Ga~Vi~~~~~~~~~~~~~----~lGa~~----vi~~~~--~~~~~~~~~--~~~g  217 (346)
T 3fbg_A          150 EGKTLLIINGAGGVGSIATQIAKAYGLRVITTASRNETIEWTK----KMGADI----VLNHKE--SLLNQFKTQ--GIEL  217 (346)
T ss_dssp             TTCEEEEESTTSHHHHHHHHHHHHTTCEEEEECCSHHHHHHHH----HHTCSE----EECTTS--CHHHHHHHH--TCCC
T ss_pred             CCCEEEEEcCCCHHHHHHHHHHHHcCCEEEEEeCCHHHHHHHH----hcCCcE----EEECCc--cHHHHHHHh--CCCC
Confidence            6899999999999999999988889999999999876655433    334322    234433  233333332  2237


Q ss_pred             ccEEEEcccc
Q 044010          126 LDHLVNNAGI  135 (248)
Q Consensus       126 id~vv~~ag~  135 (248)
                      +|++++++|.
T Consensus       218 ~Dvv~d~~g~  227 (346)
T 3fbg_A          218 VDYVFCTFNT  227 (346)
T ss_dssp             EEEEEESSCH
T ss_pred             ccEEEECCCc
Confidence            9999999873

>1iz0_A Quinone oxidoreductase; APO-enzyme, riken structural genomics/proteomics initiative, RSGI, structural genomics; 2.30A {Thermus thermophilus} SCOP: b.35.1.2 c.2.1.1 PDB: 1iyz_A 2cf2_D

Probab=97.64  E-value=0.00014  Score=61.29  Aligned_cols=74  Identities=19%  Similarity=0.247  Sum_probs=53.0

Q ss_pred             CCCEEEEcCCCChHHHHHHHHHHHcCCeEEEEeCCcchHHHHHHHHHhhCCCcEEEEEccCCCHHHHHHHHHHHHhHcCC
Q 044010           46 SGKVVIITGASSGIGEHLAYEYARRGACLALCARREKSLEEVADTAREIGSPDVITIRADVSKVDDCRSLVEETMNHFGR  125 (248)
Q Consensus        46 ~~k~~lVtGg~~gIG~aia~~l~~~G~~V~l~~r~~~~~~~~~~~l~~~~~~~v~~~~~D~~~~~~~~~~~~~~~~~~g~  125 (248)
                      .|++++|+|++|++|..+++.+...|++|+.+++++++.+.+.    +.+. .   ...|.++.+++   .+++    ++
T Consensus       125 ~g~~vlV~Ga~G~vG~~~~~~a~~~Ga~Vi~~~~~~~~~~~~~----~~ga-~---~~~~~~~~~~~---~~~~----~~  189 (302)
T 1iz0_A          125 PGEKVLVQAAAGALGTAAVQVARAMGLRVLAAASRPEKLALPL----ALGA-E---EAATYAEVPER---AKAW----GG  189 (302)
T ss_dssp             TTCEEEESSTTBHHHHHHHHHHHHTTCEEEEEESSGGGSHHHH----HTTC-S---EEEEGGGHHHH---HHHT----TS
T ss_pred             CCCEEEEECCCcHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHH----hcCC-C---EEEECCcchhH---HHHh----cC
Confidence            5889999999999999999988889999999999887766542    2332 2   12355441222   2222    57


Q ss_pred             ccEEEEcccc
Q 044010          126 LDHLVNNAGI  135 (248)
Q Consensus       126 id~vv~~ag~  135 (248)
                      +|++++ +|.
T Consensus       190 ~d~vid-~g~  198 (302)
T 1iz0_A          190 LDLVLE-VRG  198 (302)
T ss_dssp             EEEEEE-CSC
T ss_pred             ceEEEE-CCH
Confidence            999999 874

>3oj0_A Glutr, glutamyl-tRNA reductase; structural genomics, PSI-2, protein structure initiative, MI center for structural genomics, MCSG; HET: MSE SO4; 1.65A {Thermoplasma volcanium}

Probab=97.62  E-value=4.2e-05  Score=57.42  Aligned_cols=71  Identities=11%  Similarity=0.210  Sum_probs=52.4

Q ss_pred             CCEEEEcCCCChHHHHHHHHHHHcCCeEEEEeCCcchHHHHHHHHHhhCCCcEEEEEccCCCHHHHHHHHHHHHhHcCCc
Q 044010           47 GKVVIITGASSGIGEHLAYEYARRGACLALCARREKSLEEVADTAREIGSPDVITIRADVSKVDDCRSLVEETMNHFGRL  126 (248)
Q Consensus        47 ~k~~lVtGg~~gIG~aia~~l~~~G~~V~l~~r~~~~~~~~~~~l~~~~~~~v~~~~~D~~~~~~~~~~~~~~~~~~g~i  126 (248)
                      +++++|.|+ |++|..+++.|.+.|++|.+.+|+.++.++..+++.      ....  +..+   +.++++       +.
T Consensus        21 ~~~v~iiG~-G~iG~~~a~~l~~~g~~v~v~~r~~~~~~~~a~~~~------~~~~--~~~~---~~~~~~-------~~   81 (144)
T 3oj0_A           21 GNKILLVGN-GMLASEIAPYFSYPQYKVTVAGRNIDHVRAFAEKYE------YEYV--LIND---IDSLIK-------NN   81 (144)
T ss_dssp             CCEEEEECC-SHHHHHHGGGCCTTTCEEEEEESCHHHHHHHHHHHT------CEEE--ECSC---HHHHHH-------TC
T ss_pred             CCEEEEECC-CHHHHHHHHHHHhCCCEEEEEcCCHHHHHHHHHHhC------CceE--eecC---HHHHhc-------CC
Confidence            889999996 999999999999999999999999887776655542      1111  2222   333332       68


Q ss_pred             cEEEEccccC
Q 044010          127 DHLVNNAGIS  136 (248)
Q Consensus       127 d~vv~~ag~~  136 (248)
                      |++|++.+..
T Consensus        82 Divi~at~~~   91 (144)
T 3oj0_A           82 DVIITATSSK   91 (144)
T ss_dssp             SEEEECSCCS
T ss_pred             CEEEEeCCCC
Confidence            9999998754

>1rjw_A ADH-HT, alcohol dehydrogenase; oxidoreductase, NAD, zinc, tetramer; 2.35A {Geobacillus stearothermophilus} SCOP: b.35.1.2 c.2.1.1 PDB: 3pii_A

Probab=97.61  E-value=0.00022  Score=61.30  Aligned_cols=77  Identities=23%  Similarity=0.312  Sum_probs=55.0

Q ss_pred             CCCEEEEcCCCChHHHHHHHHHHHcCCeEEEEeCCcchHHHHHHHHHhhCCCcEEEEEccCCCHHHHHHHHHHHHhHcCC
Q 044010           46 SGKVVIITGASSGIGEHLAYEYARRGACLALCARREKSLEEVADTAREIGSPDVITIRADVSKVDDCRSLVEETMNHFGR  125 (248)
Q Consensus        46 ~~k~~lVtGg~~gIG~aia~~l~~~G~~V~l~~r~~~~~~~~~~~l~~~~~~~v~~~~~D~~~~~~~~~~~~~~~~~~g~  125 (248)
                      .|++++|+|+ |++|..+++.+...|++|+.+++++++.+.+    ++.+. .   ..+|.++. ++.+.+.+..   +.
T Consensus       164 ~g~~VlV~Ga-G~vG~~~~~~a~~~Ga~Vi~~~~~~~~~~~~----~~lGa-~---~~~d~~~~-~~~~~~~~~~---~~  230 (339)
T 1rjw_A          164 PGEWVAIYGI-GGLGHVAVQYAKAMGLNVVAVDIGDEKLELA----KELGA-D---LVVNPLKE-DAAKFMKEKV---GG  230 (339)
T ss_dssp             TTCEEEEECC-STTHHHHHHHHHHTTCEEEEECSCHHHHHHH----HHTTC-S---EEECTTTS-CHHHHHHHHH---SS
T ss_pred             CCCEEEEECC-CHHHHHHHHHHHHcCCEEEEEeCCHHHHHHH----HHCCC-C---EEecCCCc-cHHHHHHHHh---CC
Confidence            5889999999 8899999998888999999999987765543    23332 2   23577654 3333333322   58


Q ss_pred             ccEEEEcccc
Q 044010          126 LDHLVNNAGI  135 (248)
Q Consensus       126 id~vv~~ag~  135 (248)
                      +|++|+++|.
T Consensus       231 ~d~vid~~g~  240 (339)
T 1rjw_A          231 VHAAVVTAVS  240 (339)
T ss_dssp             EEEEEESSCC
T ss_pred             CCEEEECCCC
Confidence            9999999874

>3gaz_A Alcohol dehydrogenase superfamily protein; oxidoreductase, PSI-II, alcohol dehydrogenase superf structural genomics; 1.96A {Novosphingobium aromaticivorans}

Probab=97.55  E-value=0.00019  Score=61.77  Aligned_cols=76  Identities=24%  Similarity=0.351  Sum_probs=51.9

Q ss_pred             CCCEEEEcCCCChHHHHHHHHHHHcCCeEEEEeCCcchHHHHHHHHHhhCCCcEEEEEccCCCHHHHHHHHHHHHhHcCC
Q 044010           46 SGKVVIITGASSGIGEHLAYEYARRGACLALCARREKSLEEVADTAREIGSPDVITIRADVSKVDDCRSLVEETMNHFGR  125 (248)
Q Consensus        46 ~~k~~lVtGg~~gIG~aia~~l~~~G~~V~l~~r~~~~~~~~~~~l~~~~~~~v~~~~~D~~~~~~~~~~~~~~~~~~g~  125 (248)
                      .|+++||+||+|++|...++.+...|++|+.+ +++++.+.    +++.+. .  .  +| .+. ++.+.+.+... ...
T Consensus       150 ~g~~VlV~Ga~g~iG~~~~q~a~~~Ga~Vi~~-~~~~~~~~----~~~lGa-~--~--i~-~~~-~~~~~~~~~~~-~~g  216 (343)
T 3gaz_A          150 DGQTVLIQGGGGGVGHVAIQIALARGARVFAT-ARGSDLEY----VRDLGA-T--P--ID-ASR-EPEDYAAEHTA-GQG  216 (343)
T ss_dssp             TTCEEEEETTTSHHHHHHHHHHHHTTCEEEEE-ECHHHHHH----HHHHTS-E--E--EE-TTS-CHHHHHHHHHT-TSC
T ss_pred             CCCEEEEecCCCHHHHHHHHHHHHCCCEEEEE-eCHHHHHH----HHHcCC-C--E--ec-cCC-CHHHHHHHHhc-CCC
Confidence            68999999999999999999888899999988 66655433    333342 2  2  45 333 33333333221 137


Q ss_pred             ccEEEEccc
Q 044010          126 LDHLVNNAG  134 (248)
Q Consensus       126 id~vv~~ag  134 (248)
                      +|+++.++|
T Consensus       217 ~D~vid~~g  225 (343)
T 3gaz_A          217 FDLVYDTLG  225 (343)
T ss_dssp             EEEEEESSC
T ss_pred             ceEEEECCC
Confidence            999999987

>3l4b_C TRKA K+ channel protien TM1088B; potassium channel, ring-gating complex, structural GEN PSI-2-2, protein structure initiative; HET: AMP; 3.45A {Thermotoga maritima}

Probab=97.53  E-value=0.00029  Score=56.53  Aligned_cols=73  Identities=22%  Similarity=0.151  Sum_probs=55.6

Q ss_pred             EEEEcCCCChHHHHHHHHHHHcCCeEEEEeCCcchHHHHHHHHHhhCCCcEEEEEccCCCHHHHHHHHHHHHhHcCCccE
Q 044010           49 VVIITGASSGIGEHLAYEYARRGACLALCARREKSLEEVADTAREIGSPDVITIRADVSKVDDCRSLVEETMNHFGRLDH  128 (248)
Q Consensus        49 ~~lVtGg~~gIG~aia~~l~~~G~~V~l~~r~~~~~~~~~~~l~~~~~~~v~~~~~D~~~~~~~~~~~~~~~~~~g~id~  128 (248)
                      +++|.|+ |.+|.++++.|.++|++|+++++++++.+...+.    .  ...++..|.++.+.++++      ...+.|.
T Consensus         2 ~iiIiG~-G~~G~~la~~L~~~g~~v~vid~~~~~~~~l~~~----~--~~~~i~gd~~~~~~l~~a------~i~~ad~   68 (218)
T 3l4b_C            2 KVIIIGG-ETTAYYLARSMLSRKYGVVIINKDRELCEEFAKK----L--KATIIHGDGSHKEILRDA------EVSKNDV   68 (218)
T ss_dssp             CEEEECC-HHHHHHHHHHHHHTTCCEEEEESCHHHHHHHHHH----S--SSEEEESCTTSHHHHHHH------TCCTTCE
T ss_pred             EEEEECC-CHHHHHHHHHHHhCCCeEEEEECCHHHHHHHHHH----c--CCeEEEcCCCCHHHHHhc------CcccCCE
Confidence            4788986 8999999999999999999999998765544322    2  356788999998766544      1246888


Q ss_pred             EEEccc
Q 044010          129 LVNNAG  134 (248)
Q Consensus       129 vv~~ag  134 (248)
                      +|.+.+
T Consensus        69 vi~~~~   74 (218)
T 3l4b_C           69 VVILTP   74 (218)
T ss_dssp             EEECCS
T ss_pred             EEEecC
Confidence            887653

>3rui_A Ubiquitin-like modifier-activating enzyme ATG7; autophagosome formation, non-canonical E1, ATP BI UBL, ATG8, ATG12, ATG10, ATG3, UBL activation, thiolation; 1.91A {Saccharomyces cerevisiae} PDB: 3t7e_A 3vh3_A 3vh4_A*

Probab=97.51  E-value=0.00063  Score=58.46  Aligned_cols=102  Identities=10%  Similarity=0.095  Sum_probs=65.1

Q ss_pred             HHHhhhhccccCCCCCEEEEcCCCChHHHHHHHHHHHcCC-eEEEEeCCc-------------------chHHHHHHHHH
Q 044010           33 LLSVFNSIFSEDVSGKVVIITGASSGIGEHLAYEYARRGA-CLALCARRE-------------------KSLEEVADTAR   92 (248)
Q Consensus        33 ~~~~~~~~~~~~~~~k~~lVtGg~~gIG~aia~~l~~~G~-~V~l~~r~~-------------------~~~~~~~~~l~   92 (248)
                      .|+.....-..++++++++|.|+ ||+|.++++.|+..|. ++.+++++.                   .+.+.+.+.++
T Consensus        20 ~wRll~~~g~~kL~~~~VlIvGa-GGlGs~va~~La~aGVg~ItlvD~D~Ve~SNL~RQ~l~~~~diG~~Ka~aaa~~L~   98 (340)
T 3rui_A           20 KWRILPDLNLDIIKNTKVLLLGA-GTLGCYVSRALIAWGVRKITFVDNGTVSYSNPVRQALYNFEDCGKPKAELAAASLK   98 (340)
T ss_dssp             HHHTCTTCCHHHHHTCEEEEECC-SHHHHHHHHHHHHTTCCEEEEECCCBCCTTSTTTSTTCCGGGTTSBHHHHHHHHHH
T ss_pred             HHhhcchhhHHHHhCCEEEEECC-CHHHHHHHHHHHHcCCCEEEEecCCEeccccccccccCChhhcChHHHHHHHHHHH
Confidence            33444443335788999999977 8999999999999998 899988854                   46777777887


Q ss_pred             hhCC-CcEEEEEccC-------CCHHHHHHHHHHHHhHcCCccEEEEcccc
Q 044010           93 EIGS-PDVITIRADV-------SKVDDCRSLVEETMNHFGRLDHLVNNAGI  135 (248)
Q Consensus        93 ~~~~-~~v~~~~~D~-------~~~~~~~~~~~~~~~~~g~id~vv~~ag~  135 (248)
                      +.++ .++..+..++       ++++....-.+.+.+.+.+.|+||++...
T Consensus        99 ~inP~v~v~~~~~~i~~~g~~~~~~~~~~~~~~~l~~~l~~~DlVvd~tDn  149 (340)
T 3rui_A           99 RIFPLMDATGVKLSIPMIGHKLVNEEAQHKDFDRLRALIKEHDIIFLLVDS  149 (340)
T ss_dssp             HHCTTCEEEEECCCCCCTTSCCSCHHHHHHHHHHHHHHHHHCSEEEECCSS
T ss_pred             HhCCCCEEEEEeccccccCcccchhhhhcCCHHHHHhhhccCCEEEecCCC
Confidence            7764 2344444443       22211111112222223368999888643

>2d8a_A PH0655, probable L-threonine 3-dehydrogenase; pyrococcus horikoshii OT3, structural genomics; HET: NAD; 2.05A {Pyrococcus horikoshii} PDB: 2dfv_A* 3gfb_A*

Probab=97.47  E-value=0.00035  Score=60.12  Aligned_cols=79  Identities=22%  Similarity=0.208  Sum_probs=53.4

Q ss_pred             CCCEEEEcCCCChHHHHHHHHHHHcCC-eEEEEeCCcchHHHHHHHHHhhCCCcEEEEEccCCCHHHHHHHHHHHHhHcC
Q 044010           46 SGKVVIITGASSGIGEHLAYEYARRGA-CLALCARREKSLEEVADTAREIGSPDVITIRADVSKVDDCRSLVEETMNHFG  124 (248)
Q Consensus        46 ~~k~~lVtGg~~gIG~aia~~l~~~G~-~V~l~~r~~~~~~~~~~~l~~~~~~~v~~~~~D~~~~~~~~~~~~~~~~~~g  124 (248)
                      +|++++|+|+ |++|...++.+...|+ +|+.+++++++.+.+    ++.+..    ...|.++. ++.+.+.++.. ..
T Consensus       167 ~g~~VlV~Ga-G~vG~~~~q~a~~~Ga~~Vi~~~~~~~~~~~~----~~~Ga~----~~~~~~~~-~~~~~v~~~~~-g~  235 (348)
T 2d8a_A          167 SGKSVLITGA-GPLGLLGIAVAKASGAYPVIVSEPSDFRRELA----KKVGAD----YVINPFEE-DVVKEVMDITD-GN  235 (348)
T ss_dssp             TTCCEEEECC-SHHHHHHHHHHHHTTCCSEEEECSCHHHHHHH----HHHTCS----EEECTTTS-CHHHHHHHHTT-TS
T ss_pred             CCCEEEEECC-CHHHHHHHHHHHHcCCCEEEEECCCHHHHHHH----HHhCCC----EEECCCCc-CHHHHHHHHcC-CC
Confidence            8899999999 9999999998888999 999999987655433    233322    12455543 23222222211 12


Q ss_pred             CccEEEEcccc
Q 044010          125 RLDHLVNNAGI  135 (248)
Q Consensus       125 ~id~vv~~ag~  135 (248)
                      .+|++|+++|.
T Consensus       236 g~D~vid~~g~  246 (348)
T 2d8a_A          236 GVDVFLEFSGA  246 (348)
T ss_dssp             CEEEEEECSCC
T ss_pred             CCCEEEECCCC
Confidence            69999999884

>1gu7_A Enoyl-[acyl-carrier-protein] reductase [NADPH, B-specific] 1,mitochondrial; oxidoreductase, thioester reduction, fatty acids; 1.70A {Candida tropicalis} SCOP: b.35.1.2 c.2.1.1 PDB: 1guf_A* 1n9g_B* 1n9g_A* 1gyr_A 1h0k_A

Probab=97.46  E-value=0.00061  Score=58.92  Aligned_cols=85  Identities=19%  Similarity=0.228  Sum_probs=53.6

Q ss_pred             CC-CEEEEcCCCChHHHHHHHHHHHcCCeEEEEeCCcchHHHHHHHHHhhCCCcEEEEEccCCCH--HHHHHHHHHHHh-
Q 044010           46 SG-KVVIITGASSGIGEHLAYEYARRGACLALCARREKSLEEVADTAREIGSPDVITIRADVSKV--DDCRSLVEETMN-  121 (248)
Q Consensus        46 ~~-k~~lVtGg~~gIG~aia~~l~~~G~~V~l~~r~~~~~~~~~~~l~~~~~~~v~~~~~D~~~~--~~~~~~~~~~~~-  121 (248)
                      .| .+++|+|++|++|...++.+...|++|+.+.++.++.++..+.+++.+...+    .|..+.  +++.+.+.++.+ 
T Consensus       166 ~g~~~VlV~Ga~G~vG~~aiqlak~~Ga~vi~~~~~~~~~~~~~~~~~~lGa~~v----i~~~~~~~~~~~~~i~~~t~~  241 (364)
T 1gu7_A          166 PGKDWFIQNGGTSAVGKYASQIGKLLNFNSISVIRDRPNLDEVVASLKELGATQV----ITEDQNNSREFGPTIKEWIKQ  241 (364)
T ss_dssp             TTTCEEEESCTTSHHHHHHHHHHHHHTCEEEEEECCCTTHHHHHHHHHHHTCSEE----EEHHHHHCGGGHHHHHHHHHH
T ss_pred             CCCcEEEECCCCcHHHHHHHHHHHHCCCEEEEEecCccccHHHHHHHHhcCCeEE----EecCccchHHHHHHHHHHhhc
Confidence            57 8999999999999998887777899999988877653333344444453222    222210  222222222210 


Q ss_pred             HcCCccEEEEccc
Q 044010          122 HFGRLDHLVNNAG  134 (248)
Q Consensus       122 ~~g~id~vv~~ag  134 (248)
                      ..+.+|+++.++|
T Consensus       242 ~~~g~Dvvid~~G  254 (364)
T 1gu7_A          242 SGGEAKLALNCVG  254 (364)
T ss_dssp             HTCCEEEEEESSC
T ss_pred             cCCCceEEEECCC
Confidence            1247999999987

>3fi9_A Malate dehydrogenase; structural genomics, oxidoreductase, PSI-2, protein structur initiative; 1.90A {Porphyromonas gingivalis}

Probab=97.44  E-value=0.00072  Score=58.33  Aligned_cols=120  Identities=17%  Similarity=0.156  Sum_probs=73.3

Q ss_pred             CCCCCEEEEcCCCChHHHHHHHHHHHcCC--eEEEEeCCcchHHHHHHHHHhhCCCcEEEEEccCCCHHHHHHHHHHHHh
Q 044010           44 DVSGKVVIITGASSGIGEHLAYEYARRGA--CLALCARREKSLEEVADTAREIGSPDVITIRADVSKVDDCRSLVEETMN  121 (248)
Q Consensus        44 ~~~~k~~lVtGg~~gIG~aia~~l~~~G~--~V~l~~r~~~~~~~~~~~l~~~~~~~v~~~~~D~~~~~~~~~~~~~~~~  121 (248)
                      -|+++++.|+|++|.+|..++..++.+|.  +|++.+.++++++.....+.......     .++.-..+..++      
T Consensus         5 ~~~~~KV~ViGaaG~VG~~~a~~l~~~g~~~evvLiDi~~~k~~g~a~DL~~~~~~~-----~~i~~t~d~~~a------   73 (343)
T 3fi9_A            5 YLTEEKLTIVGAAGMIGSNMAQTAAMMRLTPNLCLYDPFAVGLEGVAEEIRHCGFEG-----LNLTFTSDIKEA------   73 (343)
T ss_dssp             CSCSSEEEEETTTSHHHHHHHHHHHHTTCCSCEEEECSCHHHHHHHHHHHHHHCCTT-----CCCEEESCHHHH------
T ss_pred             ccCCCEEEEECCCChHHHHHHHHHHhcCCCCEEEEEeCCchhHHHHHHhhhhCcCCC-----CceEEcCCHHHH------
Confidence            35678899999999999999999999984  89999999887776655565432110     111111122222      


Q ss_pred             HcCCccEEEEccccCCcccccccCChHHHHHHHHhhhHHHHHHHHHHhhhhhhcCCe-EEEEcC
Q 044010          122 HFGRLDHLVNNAGISSVALFEDIVNITDFKQIMNINFWGSVYTTRFAVPHLRYTKGK-IVVLSS  184 (248)
Q Consensus       122 ~~g~id~vv~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~g~-iV~isS  184 (248)
                       +.+.|++|.+||.....   .    ++-.+.+..|..-...+.+.+.+.-  .++. ++++|.
T Consensus        74 -l~dADvVvitaG~p~kp---G----~~R~dLl~~N~~I~~~i~~~i~~~~--p~a~~vlvvsN  127 (343)
T 3fi9_A           74 -LTDAKYIVSSGGAPRKE---G----MTREDLLKGNAEIAAQLGKDIKSYC--PDCKHVIIIFN  127 (343)
T ss_dssp             -HTTEEEEEECCC--------------CHHHHHHHHHHHHHHHHHHHHHHC--TTCCEEEECSS
T ss_pred             -hCCCCEEEEccCCCCCC---C----CCHHHHHHHHHHHHHHHHHHHHHhc--cCcEEEEEecC
Confidence             23799999999964221   1    1233456667666655555554432  2354 666654

>3don_A Shikimate dehydrogenase; alpha-beta structure, rossman fold, amino-acid biosynthesis, amino acid biosynthesis, NADP, oxidoreductase; 2.10A {Staphylococcus epidermidis} PDB: 3doo_A*

Probab=97.39  E-value=9.3e-05  Score=62.03  Aligned_cols=73  Identities=18%  Similarity=0.329  Sum_probs=51.5

Q ss_pred             cCCCCCEEEEcCCCChHHHHHHHHHHHcCC-eEEEEeCCcchHHHHHHHHHhhCCCcEEEEEccCCCHHHHHHHHHHHHh
Q 044010           43 EDVSGKVVIITGASSGIGEHLAYEYARRGA-CLALCARREKSLEEVADTAREIGSPDVITIRADVSKVDDCRSLVEETMN  121 (248)
Q Consensus        43 ~~~~~k~~lVtGg~~gIG~aia~~l~~~G~-~V~l~~r~~~~~~~~~~~l~~~~~~~v~~~~~D~~~~~~~~~~~~~~~~  121 (248)
                      .++++|+++|+|+ ||.|++++..|++.|+ +|.+.+|+.++.++..+        .+...     ..++..       +
T Consensus       113 ~~l~~k~vlvlGa-Gg~g~aia~~L~~~G~~~v~v~~R~~~~a~~la~--------~~~~~-----~~~~~~-------~  171 (277)
T 3don_A          113 EGIEDAYILILGA-GGASKGIANELYKIVRPTLTVANRTMSRFNNWSL--------NINKI-----NLSHAE-------S  171 (277)
T ss_dssp             TTGGGCCEEEECC-SHHHHHHHHHHHTTCCSCCEEECSCGGGGTTCCS--------CCEEE-----CHHHHH-------H
T ss_pred             CCcCCCEEEEECC-cHHHHHHHHHHHHCCCCEEEEEeCCHHHHHHHHH--------hcccc-----cHhhHH-------H
Confidence            3678999999997 7999999999999999 89999999876554332        11111     122222       2


Q ss_pred             HcCCccEEEEccccC
Q 044010          122 HFGRLDHLVNNAGIS  136 (248)
Q Consensus       122 ~~g~id~vv~~ag~~  136 (248)
                      .....|++||+.+..
T Consensus       172 ~~~~aDiVInaTp~G  186 (277)
T 3don_A          172 HLDEFDIIINTTPAG  186 (277)
T ss_dssp             TGGGCSEEEECCC--
T ss_pred             HhcCCCEEEECccCC
Confidence            234689999997653

>1gpj_A Glutamyl-tRNA reductase; tRNA-dependent tetrapyrrole biosynthesis; HET: GMC CIT; 1.95A {Methanopyrus kandleri} SCOP: a.151.1.1 c.2.1.7 d.58.39.1

Probab=97.38  E-value=0.00063  Score=60.00  Aligned_cols=73  Identities=22%  Similarity=0.377  Sum_probs=53.5

Q ss_pred             CCCCCEEEEcCCCChHHHHHHHHHHHcCC-eEEEEeCCcchHHHHHHHHHhhCCCcEEEEEccCCCHHHHHHHHHHHHhH
Q 044010           44 DVSGKVVIITGASSGIGEHLAYEYARRGA-CLALCARREKSLEEVADTAREIGSPDVITIRADVSKVDDCRSLVEETMNH  122 (248)
Q Consensus        44 ~~~~k~~lVtGg~~gIG~aia~~l~~~G~-~V~l~~r~~~~~~~~~~~l~~~~~~~v~~~~~D~~~~~~~~~~~~~~~~~  122 (248)
                      +++|++++|.|+ |++|..+++.|...|+ +|++.+|+.++.++..+++   +. .  .  .+.   +++.+++      
T Consensus       164 ~l~g~~VlIiGa-G~iG~~~a~~l~~~G~~~V~v~~r~~~ra~~la~~~---g~-~--~--~~~---~~l~~~l------  225 (404)
T 1gpj_A          164 SLHDKTVLVVGA-GEMGKTVAKSLVDRGVRAVLVANRTYERAVELARDL---GG-E--A--VRF---DELVDHL------  225 (404)
T ss_dssp             CCTTCEEEEESC-CHHHHHHHHHHHHHCCSEEEEECSSHHHHHHHHHHH---TC-E--E--CCG---GGHHHHH------
T ss_pred             cccCCEEEEECh-HHHHHHHHHHHHHCCCCEEEEEeCCHHHHHHHHHHc---CC-c--e--ecH---HhHHHHh------
Confidence            578999999998 9999999999999999 9999999987665555444   21 1  1  222   2333333      


Q ss_pred             cCCccEEEEcccc
Q 044010          123 FGRLDHLVNNAGI  135 (248)
Q Consensus       123 ~g~id~vv~~ag~  135 (248)
                       ...|++|.+.|.
T Consensus       226 -~~aDvVi~at~~  237 (404)
T 1gpj_A          226 -ARSDVVVSATAA  237 (404)
T ss_dssp             -HTCSEEEECCSS
T ss_pred             -cCCCEEEEccCC
Confidence             268999999764

>3phh_A Shikimate dehydrogenase; shikimate pathway, helicobacter PYL oxidoreductase, alpha/beta domain, rossmann fold; HET: SKM; 1.42A {Helicobacter pylori} PDB: 3phg_A* 3phi_A* 3phj_A* 4foo_A 4fpx_A 4fos_A* 4fr5_A* 4fq8_A*

Probab=97.37  E-value=0.002  Score=53.67  Aligned_cols=67  Identities=19%  Similarity=0.238  Sum_probs=51.9

Q ss_pred             CCEEEEcCCCChHHHHHHHHHHHcCCeEEEEeCCcchHHHHHHHHHhhCCCcEEEEEccCCCHHHHHHHHHHHHhHcCCc
Q 044010           47 GKVVIITGASSGIGEHLAYEYARRGACLALCARREKSLEEVADTAREIGSPDVITIRADVSKVDDCRSLVEETMNHFGRL  126 (248)
Q Consensus        47 ~k~~lVtGg~~gIG~aia~~l~~~G~~V~l~~r~~~~~~~~~~~l~~~~~~~v~~~~~D~~~~~~~~~~~~~~~~~~g~i  126 (248)
                      +|+++|.|+ ||.|++++..|++.|.+|.+.+|+.++.++.. ++.      +...  +..+.              ...
T Consensus       118 ~k~vlvlGa-GGaaraia~~L~~~G~~v~V~nRt~~ka~~la-~~~------~~~~--~~~~l--------------~~~  173 (269)
T 3phh_A          118 YQNALILGA-GGSAKALACELKKQGLQVSVLNRSSRGLDFFQ-RLG------CDCF--MEPPK--------------SAF  173 (269)
T ss_dssp             CCEEEEECC-SHHHHHHHHHHHHTTCEEEEECSSCTTHHHHH-HHT------CEEE--SSCCS--------------SCC
T ss_pred             CCEEEEECC-CHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHH-HCC------CeEe--cHHHh--------------ccC
Confidence            899999986 99999999999999999999999999888776 442      2222  22221              168


Q ss_pred             cEEEEccccCC
Q 044010          127 DHLVNNAGISS  137 (248)
Q Consensus       127 d~vv~~ag~~~  137 (248)
                      |++||+.+...
T Consensus       174 DiVInaTp~Gm  184 (269)
T 3phh_A          174 DLIINATSASL  184 (269)
T ss_dssp             SEEEECCTTCC
T ss_pred             CEEEEcccCCC
Confidence            99999987553

>3fbt_A Chorismate mutase and shikimate 5-dehydrogenase fusion protein; structural genomics, oxidoreductase, amino-acid biosynthesis; 2.10A {Clostridium acetobutylicum}

Probab=97.36  E-value=0.0005  Score=57.70  Aligned_cols=71  Identities=14%  Similarity=0.211  Sum_probs=52.3

Q ss_pred             cCCCCCEEEEcCCCChHHHHHHHHHHHcCC-eEEEEeCCcchHHHHHHHHHhhCCCcEEEEEccCCCHHHHHHHHHHHHh
Q 044010           43 EDVSGKVVIITGASSGIGEHLAYEYARRGA-CLALCARREKSLEEVADTAREIGSPDVITIRADVSKVDDCRSLVEETMN  121 (248)
Q Consensus        43 ~~~~~k~~lVtGg~~gIG~aia~~l~~~G~-~V~l~~r~~~~~~~~~~~l~~~~~~~v~~~~~D~~~~~~~~~~~~~~~~  121 (248)
                      .++++|+++|+|+ ||.|++++..|++.|+ +|.+++|+.++.++..+.+        ..+     +.++       +.+
T Consensus       118 ~~~~~k~vlvlGa-GGaaraia~~L~~~G~~~v~v~nRt~~ka~~La~~~--------~~~-----~~~~-------l~~  176 (282)
T 3fbt_A          118 VEIKNNICVVLGS-GGAARAVLQYLKDNFAKDIYVVTRNPEKTSEIYGEF--------KVI-----SYDE-------LSN  176 (282)
T ss_dssp             CCCTTSEEEEECS-STTHHHHHHHHHHTTCSEEEEEESCHHHHHHHCTTS--------EEE-----EHHH-------HTT
T ss_pred             CCccCCEEEEECC-cHHHHHHHHHHHHcCCCEEEEEeCCHHHHHHHHHhc--------Ccc-----cHHH-------HHh
Confidence            3678999999987 7999999999999998 9999999987665544322        111     1122       222


Q ss_pred             HcCCccEEEEccccC
Q 044010          122 HFGRLDHLVNNAGIS  136 (248)
Q Consensus       122 ~~g~id~vv~~ag~~  136 (248)
                       . +.|++||+.+..
T Consensus       177 -l-~~DivInaTp~G  189 (282)
T 3fbt_A          177 -L-KGDVIINCTPKG  189 (282)
T ss_dssp             -C-CCSEEEECSSTT
T ss_pred             -c-cCCEEEECCccC
Confidence             3 799999998653

>4gsl_A Ubiquitin-like modifier-activating enzyme ATG7; ubiquitin-like protein activation enzyme, ubiquitin-like Pro transfer enzyme, protein transport; 2.70A {Saccharomyces cerevisiae} PDB: 3vh2_A 4gsk_A 3vh1_A

Probab=97.33  E-value=0.0012  Score=60.84  Aligned_cols=102  Identities=10%  Similarity=0.095  Sum_probs=67.1

Q ss_pred             HHHhhhhccccCCCCCEEEEcCCCChHHHHHHHHHHHcCC-eEEEEeCCc-------------------chHHHHHHHHH
Q 044010           33 LLSVFNSIFSEDVSGKVVIITGASSGIGEHLAYEYARRGA-CLALCARRE-------------------KSLEEVADTAR   92 (248)
Q Consensus        33 ~~~~~~~~~~~~~~~k~~lVtGg~~gIG~aia~~l~~~G~-~V~l~~r~~-------------------~~~~~~~~~l~   92 (248)
                      .|++....-.+++++++++|.|+ ||+|.++++.|+..|. ++.++|++.                   .+.+.+.+.++
T Consensus       312 ~wRllp~~g~ekL~~arVLIVGa-GGLGs~vA~~La~aGVG~ItLvD~D~Ve~SNL~RQ~L~~~~dIG~~KAeaaa~~L~  390 (615)
T 4gsl_A          312 KWRILPDLNLDIIKNTKVLLLGA-GTLGCYVSRALIAWGVRKITFVDNGTVSYSNPVRQALYNFEDCGKPKAELAAASLK  390 (615)
T ss_dssp             HHHTCTTCCHHHHHTCEEEEECC-SHHHHHHHHHHHHTTCCEEEEECCCBCCTTGGGTSTTCCGGGTTSBHHHHHHHHHH
T ss_pred             HHhhcchhhHHHHhCCeEEEECC-CHHHHHHHHHHHHcCCCEEEEEcCCCCcccCcccccCCChhhcChHHHHHHHHHHH
Confidence            34444444445789999999987 8999999999999998 899998864                   46777788888


Q ss_pred             hhCC-CcEEEEEccC-------CCHHHHHHHHHHHHhHcCCccEEEEcccc
Q 044010           93 EIGS-PDVITIRADV-------SKVDDCRSLVEETMNHFGRLDHLVNNAGI  135 (248)
Q Consensus        93 ~~~~-~~v~~~~~D~-------~~~~~~~~~~~~~~~~~g~id~vv~~ag~  135 (248)
                      +..+ .++..+..++       ++++....-.+.+.+.+.+.|+||.+...
T Consensus       391 ~iNP~V~v~~~~~~Ipm~gh~v~~e~~~~l~~~~l~~ll~~~DlVvd~tDn  441 (615)
T 4gsl_A          391 RIFPLMDATGVKLSIPMIGHKLVNEEAQHKDFDRLRALIKEHDIIFLLVDS  441 (615)
T ss_dssp             HHCTTCEEEEECCCCCCTTCCCSCHHHHHHHHHHHHHHHHHCSEEEECCSS
T ss_pred             hhCCCcEEEEeeccccccCccccchhhhcCCHHHHHHHhhcCCEEEecCCC
Confidence            7764 2444554443       22221111112222233468999988653

>2vn8_A Reticulon-4-interacting protein 1; mitochondrion, transit peptide, receptor inhibitor; HET: NDP CIT; 2.1A {Homo sapiens}

Probab=97.32  E-value=0.00086  Score=58.33  Aligned_cols=77  Identities=26%  Similarity=0.335  Sum_probs=52.5

Q ss_pred             CCCEEEEcCCCChHHHHHHHHHHHcCCeEEEEeCCcchHHHHHHHHHhhCCCcEEEEEccCCCHHHHHHHHHHHHhHcCC
Q 044010           46 SGKVVIITGASSGIGEHLAYEYARRGACLALCARREKSLEEVADTAREIGSPDVITIRADVSKVDDCRSLVEETMNHFGR  125 (248)
Q Consensus        46 ~~k~~lVtGg~~gIG~aia~~l~~~G~~V~l~~r~~~~~~~~~~~l~~~~~~~v~~~~~D~~~~~~~~~~~~~~~~~~g~  125 (248)
                      +|++++|+||+|++|...++.+...|++|+.+++ .++.+.    +++.+. .   ...|.++.+-.    +++.+ .++
T Consensus       183 ~g~~VlV~Ga~G~vG~~~~qla~~~Ga~Vi~~~~-~~~~~~----~~~lGa-~---~v~~~~~~~~~----~~~~~-~~g  248 (375)
T 2vn8_A          183 TGKRVLILGASGGVGTFAIQVMKAWDAHVTAVCS-QDASEL----VRKLGA-D---DVIDYKSGSVE----EQLKS-LKP  248 (375)
T ss_dssp             TTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEEC-GGGHHH----HHHTTC-S---EEEETTSSCHH----HHHHT-SCC
T ss_pred             CCCEEEEECCCCHHHHHHHHHHHhCCCEEEEEeC-hHHHHH----HHHcCC-C---EEEECCchHHH----HHHhh-cCC
Confidence            6899999999999999999888888999988874 444332    333343 2   22355553322    22322 357


Q ss_pred             ccEEEEccccC
Q 044010          126 LDHLVNNAGIS  136 (248)
Q Consensus       126 id~vv~~ag~~  136 (248)
                      +|++++++|..
T Consensus       249 ~D~vid~~g~~  259 (375)
T 2vn8_A          249 FDFILDNVGGS  259 (375)
T ss_dssp             BSEEEESSCTT
T ss_pred             CCEEEECCCCh
Confidence            99999999854

>3vku_A L-LDH, L-lactate dehydrogenase; rossmann fold, NADH binding, oxidoreductase; 1.96A {Lactobacillus casei} PDB: 2zqz_A 2zqy_A 3vkv_A* 1llc_A*

Probab=97.28  E-value=0.0023  Score=54.73  Aligned_cols=117  Identities=16%  Similarity=0.115  Sum_probs=68.6

Q ss_pred             CCCCCEEEEcCCCChHHHHHHHHHHHcCC--eEEEEeCCcchHHHHHHHHHhhCC--CcEEEEEccCCCHHHHHHHHHHH
Q 044010           44 DVSGKVVIITGASSGIGEHLAYEYARRGA--CLALCARREKSLEEVADTAREIGS--PDVITIRADVSKVDDCRSLVEET  119 (248)
Q Consensus        44 ~~~~k~~lVtGg~~gIG~aia~~l~~~G~--~V~l~~r~~~~~~~~~~~l~~~~~--~~v~~~~~D~~~~~~~~~~~~~~  119 (248)
                      +.+++++.|+|+ |.+|.+++..|+..|.  ++++.++++++++.....+.....  ..+.....|   .          
T Consensus         6 ~~~~~kV~ViGa-G~vG~~~a~~l~~~~~~~el~l~D~~~~k~~g~a~DL~~~~~~~~~~~i~~~~---~----------   71 (326)
T 3vku_A            6 DKDHQKVILVGD-GAVGSSYAYAMVLQGIAQEIGIVDIFKDKTKGDAIDLEDALPFTSPKKIYSAE---Y----------   71 (326)
T ss_dssp             -CCCCEEEEECC-SHHHHHHHHHHHHHTCCSEEEEECSCHHHHHHHHHHHHTTGGGSCCCEEEECC---G----------
T ss_pred             cCCCCEEEEECC-CHHHHHHHHHHHhCCCCCeEEEEeCChHHHHHHHhhHhhhhhhcCCcEEEECc---H----------
Confidence            456678999996 9999999999999987  899999998877766666654321  123333221   1          


Q ss_pred             HhHcCCccEEEEccccCCcccccccCChHHHHHHHHhhhHHHHHHHHHHhhhhhhcCCeEEEEcC
Q 044010          120 MNHFGRLDHLVNNAGISSVALFEDIVNITDFKQIMNINFWGSVYTTRFAVPHLRYTKGKIVVLSS  184 (248)
Q Consensus       120 ~~~~g~id~vv~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~g~iV~isS  184 (248)
                       +.+.+.|++|..||.....   .    +.-.+.+..|..-...+.+.+..+-  .++.++++|.
T Consensus        72 -~a~~~aDiVvi~ag~~~kp---G----~tR~dL~~~N~~I~~~i~~~i~~~~--p~a~ilvvtN  126 (326)
T 3vku_A           72 -SDAKDADLVVITAGAPQKP---G----ETRLDLVNKNLKILKSIVDPIVDSG--FNGIFLVAAN  126 (326)
T ss_dssp             -GGGTTCSEEEECCCCC-----------------------CHHHHHHHHHTTT--CCSEEEECSS
T ss_pred             -HHhcCCCEEEECCCCCCCC---C----chHHHHHHHHHHHHHHHHHHHHhcC--CceEEEEccC
Confidence             2345899999999974321   1    2223455566655555555544331  2467777764

>1mld_A Malate dehydrogenase; oxidoreductase(NAD(A)-CHOH(D)); HET: CIT; 1.83A {Sus scrofa} SCOP: c.2.1.5 d.162.1.1 PDB: 2dfd_A*

Probab=97.27  E-value=0.0024  Score=54.38  Aligned_cols=116  Identities=21%  Similarity=0.167  Sum_probs=71.0

Q ss_pred             EEEEcCCCChHHHHHHHHHHHcC--CeEEEEeCCcchHHHHHHHHHhhCCC-cEEEEEccCCCHHHHHHHHHHHHhHcCC
Q 044010           49 VVIITGASSGIGEHLAYEYARRG--ACLALCARREKSLEEVADTAREIGSP-DVITIRADVSKVDDCRSLVEETMNHFGR  125 (248)
Q Consensus        49 ~~lVtGg~~gIG~aia~~l~~~G--~~V~l~~r~~~~~~~~~~~l~~~~~~-~v~~~~~D~~~~~~~~~~~~~~~~~~g~  125 (248)
                      ++.|+|++|.+|..++..|+++|  .+|++.++++  .+.....+.+.... ++....    ..++.++++       .+
T Consensus         2 KI~IiGa~G~VG~~la~~L~~~~~~~ev~L~Di~~--~~~~a~dL~~~~~~~~l~~~~----~t~d~~~a~-------~~   68 (314)
T 1mld_A            2 KVAVLGASGGIGQPLSLLLKNSPLVSRLTLYDIAH--TPGVAADLSHIETRATVKGYL----GPEQLPDCL-------KG   68 (314)
T ss_dssp             EEEEETTTSTTHHHHHHHHHTCTTCSEEEEEESSS--HHHHHHHHTTSSSSCEEEEEE----SGGGHHHHH-------TT
T ss_pred             EEEEECCCChHHHHHHHHHHhCCCCcEEEEEeCCc--cHHHHHHHhccCcCceEEEec----CCCCHHHHh-------CC
Confidence            58899999999999999999888  6899999987  33333344432211 122211    012333333       37


Q ss_pred             ccEEEEccccCCcccccccCChHHHHHHHHhhhHHHHHHHHHHhhhhhhcCCeEEEEcCcc
Q 044010          126 LDHLVNNAGISSVALFEDIVNITDFKQIMNINFWGSVYTTRFAVPHLRYTKGKIVVLSSAA  186 (248)
Q Consensus       126 id~vv~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~g~iV~isS~~  186 (248)
                      .|++|+.+|...... .   +..   +.+..|......+.+.+.+.-  ..+.++++|--.
T Consensus        69 aDvVvi~ag~~~~~g-~---~r~---dl~~~n~~i~~~i~~~i~~~~--p~a~viv~sNPv  120 (314)
T 1mld_A           69 CDVVVIPAGVPRKPG-M---TRD---DLFNTNATIVATLTAACAQHC--PDAMICIISNPV  120 (314)
T ss_dssp             CSEEEECCSCCCCTT-C---CGG---GGHHHHHHHHHHHHHHHHHHC--TTSEEEECSSCH
T ss_pred             CCEEEECCCcCCCCC-C---cHH---HHHHHHHHHHHHHHHHHHhhC--CCeEEEEECCCc
Confidence            999999999754221 1   112   235666666666666655442  347888876533

>3pqe_A L-LDH, L-lactate dehydrogenase; FBP, oxidoreductase; 2.20A {Bacillus subtilis} PDB: 3pqf_A* 3pqd_A*

Probab=97.26  E-value=0.0046  Score=52.87  Aligned_cols=116  Identities=13%  Similarity=0.034  Sum_probs=75.2

Q ss_pred             CCCEEEEcCCCChHHHHHHHHHHHcCC--eEEEEeCCcchHHHHHHHHHhhCC---CcEEEEEccCCCHHHHHHHHHHHH
Q 044010           46 SGKVVIITGASSGIGEHLAYEYARRGA--CLALCARREKSLEEVADTAREIGS---PDVITIRADVSKVDDCRSLVEETM  120 (248)
Q Consensus        46 ~~k~~lVtGg~~gIG~aia~~l~~~G~--~V~l~~r~~~~~~~~~~~l~~~~~---~~v~~~~~D~~~~~~~~~~~~~~~  120 (248)
                      +.+++.|+|+ |.+|.+++..|+..|.  +|++.++++++.+.....+.+...   ..+.....|   .           
T Consensus         4 ~~~kI~ViGa-G~vG~~~a~~l~~~~~~~~l~l~D~~~~k~~g~a~DL~~~~~~~~~~v~i~~~~---~-----------   68 (326)
T 3pqe_A            4 HVNKVALIGA-GFVGSSYAFALINQGITDELVVIDVNKEKAMGDVMDLNHGKAFAPQPVKTSYGT---Y-----------   68 (326)
T ss_dssp             SCCEEEEECC-SHHHHHHHHHHHHHTCCSEEEEECSCHHHHHHHHHHHHHTGGGSSSCCEEEEEC---G-----------
T ss_pred             CCCEEEEECC-CHHHHHHHHHHHhCCCCceEEEEecchHHHHHHHHHHHhccccccCCeEEEeCc---H-----------
Confidence            4567899996 9999999999999987  899999998877776655654311   133333222   1           


Q ss_pred             hHcCCccEEEEccccCCcccccccCChHHHHHHHHhhhHHHHHHHHHHhhhhhhcCCeEEEEcCc
Q 044010          121 NHFGRLDHLVNNAGISSVALFEDIVNITDFKQIMNINFWGSVYTTRFAVPHLRYTKGKIVVLSSA  185 (248)
Q Consensus       121 ~~~g~id~vv~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~g~iV~isS~  185 (248)
                      +.+.+-|++|.++|.....   . .+   -.+.+..|..-...+.+.+...-  .++.++++|.-
T Consensus        69 ~a~~~aDvVvi~ag~p~kp---G-~~---R~dL~~~N~~Iv~~i~~~I~~~~--p~a~vlvvtNP  124 (326)
T 3pqe_A           69 EDCKDADIVCICAGANQKP---G-ET---RLELVEKNLKIFKGIVSEVMASG--FDGIFLVATNP  124 (326)
T ss_dssp             GGGTTCSEEEECCSCCCCT---T-CC---HHHHHHHHHHHHHHHHHHHHHTT--CCSEEEECSSS
T ss_pred             HHhCCCCEEEEecccCCCC---C-cc---HHHHHHHHHHHHHHHHHHHHHhc--CCeEEEEcCCh
Confidence            2334799999999964321   1 12   23446667666655666655431  34677777753

>1jay_A Coenzyme F420H2:NADP+ oxidoreductase (FNO); rossman fold, structural genomics; HET: NAP F42; 1.65A {Archaeoglobus fulgidus} SCOP: c.2.1.6 PDB: 1jax_A*

Probab=97.23  E-value=0.00039  Score=55.35  Aligned_cols=42  Identities=29%  Similarity=0.407  Sum_probs=36.2

Q ss_pred             EEEEcCCCChHHHHHHHHHHHcCCeEEEEeCCcchHHHHHHH
Q 044010           49 VVIITGASSGIGEHLAYEYARRGACLALCARREKSLEEVADT   90 (248)
Q Consensus        49 ~~lVtGg~~gIG~aia~~l~~~G~~V~l~~r~~~~~~~~~~~   90 (248)
                      +++|+||+|.+|.++++.|+++|++|.+.+|++++.++..+.
T Consensus         2 ~i~iiGa~G~~G~~ia~~l~~~g~~V~~~~r~~~~~~~~~~~   43 (212)
T 1jay_A            2 RVALLGGTGNLGKGLALRLATLGHEIVVGSRREEKAEAKAAE   43 (212)
T ss_dssp             EEEEETTTSHHHHHHHHHHHTTTCEEEEEESSHHHHHHHHHH
T ss_pred             eEEEEcCCCHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHH
Confidence            578899899999999999999999999999998776655443

>5mdh_A Malate dehydrogenase; oxidoreductase, (NAD(A)-CHOH(D)); HET: NAD; 2.40A {Sus scrofa} SCOP: c.2.1.5 d.162.1.1 PDB: 4mdh_A*

Probab=97.22  E-value=0.0026  Score=54.56  Aligned_cols=117  Identities=18%  Similarity=0.130  Sum_probs=71.6

Q ss_pred             CEEEEcCCCChHHHHHHHHHHHcCC--e-----EEEEeCCc--chHHHHHHHHHhhCCCcEEEEEccCCCHHHHHHHHHH
Q 044010           48 KVVIITGASSGIGEHLAYEYARRGA--C-----LALCARRE--KSLEEVADTAREIGSPDVITIRADVSKVDDCRSLVEE  118 (248)
Q Consensus        48 k~~lVtGg~~gIG~aia~~l~~~G~--~-----V~l~~r~~--~~~~~~~~~l~~~~~~~v~~~~~D~~~~~~~~~~~~~  118 (248)
                      .++.||||+|.+|.+++..|+.+|.  +     +++.++++  ++++.....+.........-+.  .  .++..     
T Consensus         4 ~kV~V~GaaG~VG~~la~~L~~~~~~~e~~~~~l~L~Di~~~~~~~~g~a~DL~~~~~~~~~~~~--~--~~~~~-----   74 (333)
T 5mdh_A            4 IRVLVTGAAGQIAYSLLYSIGNGSVFGKDQPIILVLLDITPMMGVLDGVLMELQDCALPLLKDVI--A--TDKEE-----   74 (333)
T ss_dssp             EEEEESSTTSHHHHTTHHHHHTTTTTCTTCCEEEEEECCGGGHHHHHHHHHHHHHTCCTTEEEEE--E--ESCHH-----
T ss_pred             eEEEEECCCCHHHHHHHHHHHhCCCccccCCCEEEEEeCCCccccchhhHhhhHhhhhcccCCEE--E--cCCcH-----
Confidence            4799999999999999999998875  5     99999975  3555555556553211221111  1  11122     


Q ss_pred             HHhHcCCccEEEEccccCCcccccccCChHHHHHHHHhhhHHHHHHHHHHhhhhhhcCC-eEEEEcC
Q 044010          119 TMNHFGRLDHLVNNAGISSVALFEDIVNITDFKQIMNINFWGSVYTTRFAVPHLRYTKG-KIVVLSS  184 (248)
Q Consensus       119 ~~~~~g~id~vv~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~g-~iV~isS  184 (248)
                        +.+.+.|++|+.||..... -.   +   -.+.++.|......+.+.+.+.-  .++ .++++|.
T Consensus        75 --~~~~daDvVvitAg~prkp-G~---t---R~dll~~N~~i~~~i~~~i~~~~--~~~~~vivvsN  130 (333)
T 5mdh_A           75 --IAFKDLDVAILVGSMPRRD-GM---E---RKDLLKANVKIFKCQGAALDKYA--KKSVKVIVVGN  130 (333)
T ss_dssp             --HHTTTCSEEEECCSCCCCT-TC---C---TTTTHHHHHHHHHHHHHHHHHHS--CTTCEEEECSS
T ss_pred             --HHhCCCCEEEEeCCCCCCC-CC---C---HHHHHHHHHHHHHHHHHHHHHhC--CCCeEEEEcCC
Confidence              2334899999999865321 11   1   23455667777666666654331  235 5777765

>3gvi_A Malate dehydrogenase; NAD, oxidoreductase, tricarboxylic acid cycle, structural genomics; HET: ADP; 2.25A {Brucella melitensis biovar ABORTUS2308} PDB: 3gvh_A*

Probab=97.22  E-value=0.0085  Score=51.18  Aligned_cols=118  Identities=12%  Similarity=0.072  Sum_probs=72.0

Q ss_pred             cCCCCCEEEEcCCCChHHHHHHHHHHHcCC-eEEEEeCCcchHHHHHHHHHhhC-----CCcEEEEEccCCCHHHHHHHH
Q 044010           43 EDVSGKVVIITGASSGIGEHLAYEYARRGA-CLALCARREKSLEEVADTAREIG-----SPDVITIRADVSKVDDCRSLV  116 (248)
Q Consensus        43 ~~~~~k~~lVtGg~~gIG~aia~~l~~~G~-~V~l~~r~~~~~~~~~~~l~~~~-----~~~v~~~~~D~~~~~~~~~~~  116 (248)
                      ..|+.+++.|+|+ |.+|.+++..|+..|. +|++.++++++.+.....+.+..     +.++.. ..|   .       
T Consensus         3 ~~m~~~kI~viGa-G~vG~~~a~~l~~~~~~~v~L~Di~~~~~~g~~~dl~~~~~~~~~~~~v~~-t~d---~-------   70 (324)
T 3gvi_A            3 GSMARNKIALIGS-GMIGGTLAHLAGLKELGDVVLFDIAEGTPQGKGLDIAESSPVDGFDAKFTG-AND---Y-------   70 (324)
T ss_dssp             ---CCCEEEEECC-SHHHHHHHHHHHHTTCCEEEEECSSSSHHHHHHHHHHHHHHHHTCCCCEEE-ESS---G-------
T ss_pred             CCCcCCEEEEECC-CHHHHHHHHHHHhCCCCeEEEEeCCchhHHHHHHHHhchhhhcCCCCEEEE-eCC---H-------
Confidence            4577788999998 9999999999999998 99999999988765554454321     222221 122   2       


Q ss_pred             HHHHhHcCCccEEEEccccCCcccccccCChHHHHHHHHhhhHHHHHHHHHHhhhhhhcCCeEEEEcCc
Q 044010          117 EETMNHFGRLDHLVNNAGISSVALFEDIVNITDFKQIMNINFWGSVYTTRFAVPHLRYTKGKIVVLSSA  185 (248)
Q Consensus       117 ~~~~~~~g~id~vv~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~g~iV~isS~  185 (248)
                          +.+.+-|++|.++|......       +.-.+.+..|..-...+.+.+...-  ..+.++++|.-
T Consensus        71 ----~a~~~aDiVIiaag~p~k~G-------~~R~dl~~~N~~i~~~i~~~i~~~~--p~a~iivvtNP  126 (324)
T 3gvi_A           71 ----AAIEGADVVIVTAGVPRKPG-------MSRDDLLGINLKVMEQVGAGIKKYA--PEAFVICITNP  126 (324)
T ss_dssp             ----GGGTTCSEEEECCSCCCC------------CHHHHHHHHHHHHHHHHHHHHC--TTCEEEECCSS
T ss_pred             ----HHHCCCCEEEEccCcCCCCC-------CCHHHHHHhhHHHHHHHHHHHHHHC--CCeEEEecCCC
Confidence                12347999999998643221       1112345556555555555544331  34677777753

>3m6i_A L-arabinitol 4-dehydrogenase; medium chain dehydrogenase/reductase, oxidoreductase; HET: NAD; 2.60A {Neurospora crassa}

Probab=97.22  E-value=0.0016  Score=56.27  Aligned_cols=83  Identities=23%  Similarity=0.304  Sum_probs=57.2

Q ss_pred             CCCEEEEcCCCChHHHHHHHHHHHcCCe-EEEEeCCcchHHHHHHHHHhhCCCcEEEEEccCCCHHHHHHHHHHHHhHcC
Q 044010           46 SGKVVIITGASSGIGEHLAYEYARRGAC-LALCARREKSLEEVADTAREIGSPDVITIRADVSKVDDCRSLVEETMNHFG  124 (248)
Q Consensus        46 ~~k~~lVtGg~~gIG~aia~~l~~~G~~-V~l~~r~~~~~~~~~~~l~~~~~~~v~~~~~D~~~~~~~~~~~~~~~~~~g  124 (248)
                      +|+++||+|+ |++|...++.+...|++ |+.+++++++.+.+.+    .. ..+..+..|-.+.+++.+.+.+... ..
T Consensus       179 ~g~~VlV~Ga-G~vG~~aiqlak~~Ga~~Vi~~~~~~~~~~~a~~----l~-~~~~~~~~~~~~~~~~~~~v~~~t~-g~  251 (363)
T 3m6i_A          179 LGDPVLICGA-GPIGLITMLCAKAAGACPLVITDIDEGRLKFAKE----IC-PEVVTHKVERLSAEESAKKIVESFG-GI  251 (363)
T ss_dssp             TTCCEEEECC-SHHHHHHHHHHHHTTCCSEEEEESCHHHHHHHHH----HC-TTCEEEECCSCCHHHHHHHHHHHTS-SC
T ss_pred             CCCEEEEECC-CHHHHHHHHHHHHcCCCEEEEECCCHHHHHHHHH----hc-hhcccccccccchHHHHHHHHHHhC-CC
Confidence            5889999998 99999998877778996 8999988776554332    22 2445555665555555444443321 23


Q ss_pred             CccEEEEcccc
Q 044010          125 RLDHLVNNAGI  135 (248)
Q Consensus       125 ~id~vv~~ag~  135 (248)
                      .+|+++.++|.
T Consensus       252 g~Dvvid~~g~  262 (363)
T 3m6i_A          252 EPAVALECTGV  262 (363)
T ss_dssp             CCSEEEECSCC
T ss_pred             CCCEEEECCCC
Confidence            79999999873

>1zud_1 Adenylyltransferase THIF; thiamin, thiazole, protein-protein complex, THIF, TRAN biosynthetic protein complex; 1.98A {Escherichia coli} PDB: 1zfn_A* 1zkm_A

Probab=97.20  E-value=0.0022  Score=52.75  Aligned_cols=83  Identities=16%  Similarity=0.285  Sum_probs=59.7

Q ss_pred             cCCCCCEEEEcCCCChHHHHHHHHHHHcCC-eEEEEeCCc-------------------chHHHHHHHHHhhCC-CcEEE
Q 044010           43 EDVSGKVVIITGASSGIGEHLAYEYARRGA-CLALCARRE-------------------KSLEEVADTAREIGS-PDVIT  101 (248)
Q Consensus        43 ~~~~~k~~lVtGg~~gIG~aia~~l~~~G~-~V~l~~r~~-------------------~~~~~~~~~l~~~~~-~~v~~  101 (248)
                      .++++++++|.|+ ||+|.++++.|+..|. ++.+++++.                   .+.+.+.+.+++..+ .++..
T Consensus        24 ~~l~~~~VlvvG~-GglG~~va~~La~~Gvg~i~lvD~d~v~~sNL~Rq~l~~~~diG~~Ka~~~~~~l~~~np~~~v~~  102 (251)
T 1zud_1           24 QKLLDSQVLIIGL-GGLGTPAALYLAGAGVGTLVLADDDDVHLSNLQRQILFTTEDIDRPKSQVSQQRLTQLNPDIQLTA  102 (251)
T ss_dssp             HHHHTCEEEEECC-STTHHHHHHHHHHTTCSEEEEECCCBCCGGGTTTCTTCCGGGTTSBHHHHHHHHHHHHCTTSEEEE
T ss_pred             HHHhcCcEEEEcc-CHHHHHHHHHHHHcCCCeEEEEeCCCcccccCCCCccCChhhCCCHHHHHHHHHHHHHCCCCEEEE
Confidence            3678999999987 7899999999999998 888887653                   567777778877653 24555


Q ss_pred             EEccCCCHHHHHHHHHHHHhHcCCccEEEEccc
Q 044010          102 IRADVSKVDDCRSLVEETMNHFGRLDHLVNNAG  134 (248)
Q Consensus       102 ~~~D~~~~~~~~~~~~~~~~~~g~id~vv~~ag  134 (248)
                      +..+++. +.+.++++       +.|+||.+..
T Consensus       103 ~~~~~~~-~~~~~~~~-------~~DvVi~~~d  127 (251)
T 1zud_1          103 LQQRLTG-EALKDAVA-------RADVVLDCTD  127 (251)
T ss_dssp             ECSCCCH-HHHHHHHH-------HCSEEEECCS
T ss_pred             EeccCCH-HHHHHHHh-------cCCEEEECCC
Confidence            5555543 34444433       4799988743

>1xa0_A Putative NADPH dependent oxidoreductases; structural genomics, protein structure initiative, MCSG; HET: DTY; 2.80A {Geobacillus stearothermophilus} SCOP: b.35.1.2 c.2.1.1

Probab=97.18  E-value=0.00045  Score=58.87  Aligned_cols=75  Identities=19%  Similarity=0.252  Sum_probs=49.3

Q ss_pred             EEEEcCCCChHHHHHHHHHHHcCCeEEEEeCCcchHHHHHHHHHhhCCCcEEEEEccCCCHHHHHHHHHHHHhHcCCccE
Q 044010           49 VVIITGASSGIGEHLAYEYARRGACLALCARREKSLEEVADTAREIGSPDVITIRADVSKVDDCRSLVEETMNHFGRLDH  128 (248)
Q Consensus        49 ~~lVtGg~~gIG~aia~~l~~~G~~V~l~~r~~~~~~~~~~~l~~~~~~~v~~~~~D~~~~~~~~~~~~~~~~~~g~id~  128 (248)
                      +++|+|++|++|...++.+...|++|+.+++++++.+.+.    +.+...    .+|.++.+  .+.++++  ..+.+|+
T Consensus       152 ~VlV~Ga~G~vG~~~~q~a~~~Ga~vi~~~~~~~~~~~~~----~lGa~~----~i~~~~~~--~~~~~~~--~~~~~d~  219 (328)
T 1xa0_A          152 PVLVTGATGGVGSLAVSMLAKRGYTVEASTGKAAEHDYLR----VLGAKE----VLAREDVM--AERIRPL--DKQRWAA  219 (328)
T ss_dssp             CEEESSTTSHHHHHHHHHHHHTTCCEEEEESCTTCHHHHH----HTTCSE----EEECC-----------C--CSCCEEE
T ss_pred             eEEEecCCCHHHHHHHHHHHHCCCEEEEEECCHHHHHHHH----HcCCcE----EEecCCcH--HHHHHHh--cCCcccE
Confidence            7999999999999999888889999999999887765442    333222    23555432  2222222  1237999


Q ss_pred             EEEcccc
Q 044010          129 LVNNAGI  135 (248)
Q Consensus       129 vv~~ag~  135 (248)
                      +++++|.
T Consensus       220 vid~~g~  226 (328)
T 1xa0_A          220 AVDPVGG  226 (328)
T ss_dssp             EEECSTT
T ss_pred             EEECCcH
Confidence            9999884

>3uog_A Alcohol dehydrogenase; structural genomics, protein structure initiative, PSI-biolo YORK structural genomics research consortium; 2.20A {Sinorhizobium meliloti 1021}

Probab=97.12  E-value=0.0011  Score=57.47  Aligned_cols=78  Identities=18%  Similarity=0.239  Sum_probs=54.2

Q ss_pred             CCCEEEEcCCCChHHHHHHHHHHHcCCeEEEEeCCcchHHHHHHHHHhhCCCcEEEEEccCCCHHHHHHHHHHHHhHcCC
Q 044010           46 SGKVVIITGASSGIGEHLAYEYARRGACLALCARREKSLEEVADTAREIGSPDVITIRADVSKVDDCRSLVEETMNHFGR  125 (248)
Q Consensus        46 ~~k~~lVtGg~~gIG~aia~~l~~~G~~V~l~~r~~~~~~~~~~~l~~~~~~~v~~~~~D~~~~~~~~~~~~~~~~~~g~  125 (248)
                      .|+++||+| +|++|...++.+...|++|+++++++++.+.+    ++.+...    ..| .+.+++.+.+.++.. ...
T Consensus       189 ~g~~VlV~G-~G~vG~~a~qla~~~Ga~Vi~~~~~~~~~~~~----~~lGa~~----vi~-~~~~~~~~~v~~~~~-g~g  257 (363)
T 3uog_A          189 AGDRVVVQG-TGGVALFGLQIAKATGAEVIVTSSSREKLDRA----FALGADH----GIN-RLEEDWVERVYALTG-DRG  257 (363)
T ss_dssp             TTCEEEEES-SBHHHHHHHHHHHHTTCEEEEEESCHHHHHHH----HHHTCSE----EEE-TTTSCHHHHHHHHHT-TCC
T ss_pred             CCCEEEEEC-CCHHHHHHHHHHHHcCCEEEEEecCchhHHHH----HHcCCCE----EEc-CCcccHHHHHHHHhC-CCC
Confidence            688999999 89999999988888899999999987665543    3334322    235 443444444443322 127


Q ss_pred             ccEEEEccc
Q 044010          126 LDHLVNNAG  134 (248)
Q Consensus       126 id~vv~~ag  134 (248)
                      +|+++.++|
T Consensus       258 ~D~vid~~g  266 (363)
T 3uog_A          258 ADHILEIAG  266 (363)
T ss_dssp             EEEEEEETT
T ss_pred             ceEEEECCC
Confidence            999999998

>3s2e_A Zinc-containing alcohol dehydrogenase superfamily; FURX, oxidoreductase; HET: NAD; 1.76A {Ralstonia eutropha} PDB: 3s1l_A* 3s2f_A* 3s2g_A* 3s2i_A* 1llu_A* 3meq_A*

Probab=97.10  E-value=0.0016  Score=55.70  Aligned_cols=77  Identities=19%  Similarity=0.241  Sum_probs=53.6

Q ss_pred             CCCCEEEEcCCCChHHHHHHHHHHHcCCeEEEEeCCcchHHHHHHHHHhhCCCcEEEEEccCCCHHHHHHHHHHHHhHcC
Q 044010           45 VSGKVVIITGASSGIGEHLAYEYARRGACLALCARREKSLEEVADTAREIGSPDVITIRADVSKVDDCRSLVEETMNHFG  124 (248)
Q Consensus        45 ~~~k~~lVtGg~~gIG~aia~~l~~~G~~V~l~~r~~~~~~~~~~~l~~~~~~~v~~~~~D~~~~~~~~~~~~~~~~~~g  124 (248)
                      -.|+++||+|+ |++|...++.+...|++|+.+++++++.+.    +++.+...    ..|.++.+..+.    +.+..|
T Consensus       165 ~~g~~VlV~Ga-G~vG~~a~qla~~~Ga~Vi~~~~~~~~~~~----~~~lGa~~----~i~~~~~~~~~~----~~~~~g  231 (340)
T 3s2e_A          165 RPGQWVVISGI-GGLGHVAVQYARAMGLRVAAVDIDDAKLNL----ARRLGAEV----AVNARDTDPAAW----LQKEIG  231 (340)
T ss_dssp             CTTSEEEEECC-STTHHHHHHHHHHTTCEEEEEESCHHHHHH----HHHTTCSE----EEETTTSCHHHH----HHHHHS
T ss_pred             CCCCEEEEECC-CHHHHHHHHHHHHCCCeEEEEeCCHHHHHH----HHHcCCCE----EEeCCCcCHHHH----HHHhCC
Confidence            36889999986 899999988888889999999998776553    33334322    245555433322    223346


Q ss_pred             CccEEEEccc
Q 044010          125 RLDHLVNNAG  134 (248)
Q Consensus       125 ~id~vv~~ag  134 (248)
                      .+|+++.++|
T Consensus       232 ~~d~vid~~g  241 (340)
T 3s2e_A          232 GAHGVLVTAV  241 (340)
T ss_dssp             SEEEEEESSC
T ss_pred             CCCEEEEeCC
Confidence            8999999986

>1cdo_A Alcohol dehydrogenase; oxidoreductase, oxidoreductase (CH-OH(D)-NAD(A)); HET: NAD; 2.05A {Gadus callarias} SCOP: b.35.1.2 c.2.1.1

Probab=97.10  E-value=0.0012  Score=57.26  Aligned_cols=79  Identities=15%  Similarity=0.268  Sum_probs=54.4

Q ss_pred             CCCEEEEcCCCChHHHHHHHHHHHcCC-eEEEEeCCcchHHHHHHHHHhhCCCcEEEEEccCCC-HHHHHHHHHHHHhHc
Q 044010           46 SGKVVIITGASSGIGEHLAYEYARRGA-CLALCARREKSLEEVADTAREIGSPDVITIRADVSK-VDDCRSLVEETMNHF  123 (248)
Q Consensus        46 ~~k~~lVtGg~~gIG~aia~~l~~~G~-~V~l~~r~~~~~~~~~~~l~~~~~~~v~~~~~D~~~-~~~~~~~~~~~~~~~  123 (248)
                      .|+++||+|+ |++|...++.+...|+ +|+.+++++++.+.+    ++.+...    ..|.++ .+++.+.+.++..  
T Consensus       192 ~g~~VlV~Ga-G~vG~~a~qla~~~Ga~~Vi~~~~~~~~~~~~----~~lGa~~----vi~~~~~~~~~~~~~~~~~~--  260 (374)
T 1cdo_A          192 PGSTCAVFGL-GAVGLAAVMGCHSAGAKRIIAVDLNPDKFEKA----KVFGATD----FVNPNDHSEPISQVLSKMTN--  260 (374)
T ss_dssp             TTCEEEEECC-SHHHHHHHHHHHHTTCSEEEEECSCGGGHHHH----HHTTCCE----EECGGGCSSCHHHHHHHHHT--
T ss_pred             CCCEEEEECC-CHHHHHHHHHHHHcCCCEEEEEcCCHHHHHHH----HHhCCce----EEeccccchhHHHHHHHHhC--
Confidence            5889999995 9999999988878899 899999988776643    2333221    235443 1234444444332  


Q ss_pred             CCccEEEEcccc
Q 044010          124 GRLDHLVNNAGI  135 (248)
Q Consensus       124 g~id~vv~~ag~  135 (248)
                      +.+|++|.++|.
T Consensus       261 ~g~D~vid~~g~  272 (374)
T 1cdo_A          261 GGVDFSLECVGN  272 (374)
T ss_dssp             SCBSEEEECSCC
T ss_pred             CCCCEEEECCCC
Confidence            479999999874

>2dq4_A L-threonine 3-dehydrogenase; NAD-dependent, oxidoreductase, structural genomics, NPPSFA; HET: MES; 2.50A {Thermus thermophilus} PDB: 2ejv_A*

Probab=97.09  E-value=0.00052  Score=58.96  Aligned_cols=77  Identities=26%  Similarity=0.238  Sum_probs=53.5

Q ss_pred             CCCEEEEcCCCChHHHHHHHHHHHcCC-eEEEEeCCcchHHHHHHHHHhhCCCcEEEEEccCCCHHHHHHHHHHHHhHcC
Q 044010           46 SGKVVIITGASSGIGEHLAYEYARRGA-CLALCARREKSLEEVADTAREIGSPDVITIRADVSKVDDCRSLVEETMNHFG  124 (248)
Q Consensus        46 ~~k~~lVtGg~~gIG~aia~~l~~~G~-~V~l~~r~~~~~~~~~~~l~~~~~~~v~~~~~D~~~~~~~~~~~~~~~~~~g  124 (248)
                      .|++++|+|+ |++|...++.+...|+ +|+.+++++++.+.+    ++. . .   ...|.++. ++.+.+.++.  .+
T Consensus       164 ~g~~VlV~Ga-G~vG~~~~q~a~~~Ga~~Vi~~~~~~~~~~~~----~~l-a-~---~v~~~~~~-~~~~~~~~~~--~~  230 (343)
T 2dq4_A          164 SGKSVLITGA-GPIGLMAAMVVRASGAGPILVSDPNPYRLAFA----RPY-A-D---RLVNPLEE-DLLEVVRRVT--GS  230 (343)
T ss_dssp             TTSCEEEECC-SHHHHHHHHHHHHTTCCSEEEECSCHHHHGGG----TTT-C-S---EEECTTTS-CHHHHHHHHH--SS
T ss_pred             CCCEEEEECC-CHHHHHHHHHHHHcCCCEEEEECCCHHHHHHH----HHh-H-H---hccCcCcc-CHHHHHHHhc--CC
Confidence            7899999999 9999999988888899 999999987654332    222 1 1   22455543 3444444332  34


Q ss_pred             CccEEEEcccc
Q 044010          125 RLDHLVNNAGI  135 (248)
Q Consensus       125 ~id~vv~~ag~  135 (248)
                      .+|++|.++|.
T Consensus       231 g~D~vid~~g~  241 (343)
T 2dq4_A          231 GVEVLLEFSGN  241 (343)
T ss_dssp             CEEEEEECSCC
T ss_pred             CCCEEEECCCC
Confidence            79999999884

>1e3j_A NADP(H)-dependent ketose reductase; oxidoreductase, fructose reduction; 2.3A {Bemisia argentifolii} SCOP: b.35.1.2 c.2.1.1

Probab=97.06  E-value=0.0013  Score=56.67  Aligned_cols=81  Identities=22%  Similarity=0.275  Sum_probs=52.3

Q ss_pred             CCCEEEEcCCCChHHHHHHHHHHHcCCeEEEEeCCcchHHHHHHHHHhhCCCcEEEEEccCCC-HHHHHHHHHHHHh-Hc
Q 044010           46 SGKVVIITGASSGIGEHLAYEYARRGACLALCARREKSLEEVADTAREIGSPDVITIRADVSK-VDDCRSLVEETMN-HF  123 (248)
Q Consensus        46 ~~k~~lVtGg~~gIG~aia~~l~~~G~~V~l~~r~~~~~~~~~~~l~~~~~~~v~~~~~D~~~-~~~~~~~~~~~~~-~~  123 (248)
                      .|+++||+|+ |++|...++.+...|++|+.+++++++.+.+    ++.+. .   ...|.++ .+..+++.+...+ ..
T Consensus       168 ~g~~VlV~Ga-G~vG~~a~qla~~~Ga~Vi~~~~~~~~~~~~----~~lGa-~---~~~~~~~~~~~~~~i~~~~~~~~g  238 (352)
T 1e3j_A          168 LGTTVLVIGA-GPIGLVSVLAAKAYGAFVVCTARSPRRLEVA----KNCGA-D---VTLVVDPAKEEESSIIERIRSAIG  238 (352)
T ss_dssp             TTCEEEEECC-SHHHHHHHHHHHHTTCEEEEEESCHHHHHHH----HHTTC-S---EEEECCTTTSCHHHHHHHHHHHSS
T ss_pred             CCCEEEEECC-CHHHHHHHHHHHHcCCEEEEEcCCHHHHHHH----HHhCC-C---EEEcCcccccHHHHHHHHhccccC
Confidence            5889999996 8999999988778899999999887655433    33343 2   2235553 2222222221110 02


Q ss_pred             CCccEEEEcccc
Q 044010          124 GRLDHLVNNAGI  135 (248)
Q Consensus       124 g~id~vv~~ag~  135 (248)
                      +.+|++++++|.
T Consensus       239 ~g~D~vid~~g~  250 (352)
T 1e3j_A          239 DLPNVTIDCSGN  250 (352)
T ss_dssp             SCCSEEEECSCC
T ss_pred             CCCCEEEECCCC
Confidence            369999999874

>2aef_A Calcium-gated potassium channel MTHK; rossmann fold, helix-turn-helix, Ca2+ binding, flexible interface; 1.70A {Methanothermobacterthermautotrophicus} PDB: 2aej_A 2aem_A 3rbx_A 2ogu_A 2fy8_A 3kxd_A

Probab=97.04  E-value=0.00068  Score=54.89  Aligned_cols=72  Identities=14%  Similarity=0.138  Sum_probs=52.8

Q ss_pred             CCEEEEcCCCChHHHHHHHHHHHcCCeEEEEeCCcchHHHHHHHHHhhCCCcEEEEEccCCCHHHHHHHHHHHHhHcCCc
Q 044010           47 GKVVIITGASSGIGEHLAYEYARRGACLALCARREKSLEEVADTAREIGSPDVITIRADVSKVDDCRSLVEETMNHFGRL  126 (248)
Q Consensus        47 ~k~~lVtGg~~gIG~aia~~l~~~G~~V~l~~r~~~~~~~~~~~l~~~~~~~v~~~~~D~~~~~~~~~~~~~~~~~~g~i  126 (248)
                      .++++|.|+ |.+|..+++.|.++|+ |++++++++..+..    .  .  .+.++..|.++.+.++++      ...+.
T Consensus         9 ~~~viI~G~-G~~G~~la~~L~~~g~-v~vid~~~~~~~~~----~--~--~~~~i~gd~~~~~~l~~a------~i~~a   72 (234)
T 2aef_A            9 SRHVVICGW-SESTLECLRELRGSEV-FVLAEDENVRKKVL----R--S--GANFVHGDPTRVSDLEKA------NVRGA   72 (234)
T ss_dssp             -CEEEEESC-CHHHHHHHHHSTTSEE-EEEESCGGGHHHHH----H--T--TCEEEESCTTCHHHHHHT------TCTTC
T ss_pred             CCEEEEECC-ChHHHHHHHHHHhCCe-EEEEECCHHHHHHH----h--c--CCeEEEcCCCCHHHHHhc------Ccchh
Confidence            457888887 8999999999999999 99999988755433    2  1  467788999988766543      12367


Q ss_pred             cEEEEccc
Q 044010          127 DHLVNNAG  134 (248)
Q Consensus       127 d~vv~~ag  134 (248)
                      |.+|.+.+
T Consensus        73 d~vi~~~~   80 (234)
T 2aef_A           73 RAVIVDLE   80 (234)
T ss_dssp             SEEEECCS
T ss_pred             cEEEEcCC
Confidence            77776653

>3tl2_A Malate dehydrogenase; center for structural genomics of infectious diseases, csgid dehydrogenase, oxidoreductase, citric acid cycle; 1.70A {Bacillus anthracis}

Probab=97.00  E-value=0.0088  Score=50.87  Aligned_cols=117  Identities=22%  Similarity=0.171  Sum_probs=73.1

Q ss_pred             cCCCCCEEEEcCCCChHHHHHHHHHHHcCC-eEEEEeCC--cchHHHHHHHHHhh-----CCCcEEEEEccCCCHHHHHH
Q 044010           43 EDVSGKVVIITGASSGIGEHLAYEYARRGA-CLALCARR--EKSLEEVADTAREI-----GSPDVITIRADVSKVDDCRS  114 (248)
Q Consensus        43 ~~~~~k~~lVtGg~~gIG~aia~~l~~~G~-~V~l~~r~--~~~~~~~~~~l~~~-----~~~~v~~~~~D~~~~~~~~~  114 (248)
                      |.++.+++.|+|+ |.+|.+++..|+..|. +|++.+++  +++.+.....+...     ...++.. ..|   .     
T Consensus         4 m~~~~~kv~ViGa-G~vG~~ia~~l~~~g~~~v~l~D~~~~~~~~~g~a~dl~~~~~~~~~~~~i~~-t~d---~-----   73 (315)
T 3tl2_A            4 MTIKRKKVSVIGA-GFTGATTAFLLAQKELADVVLVDIPQLENPTKGKALDMLEASPVQGFDANIIG-TSD---Y-----   73 (315)
T ss_dssp             CCCCCCEEEEECC-SHHHHHHHHHHHHTTCCEEEEECCGGGHHHHHHHHHHHHHHHHHHTCCCCEEE-ESC---G-----
T ss_pred             cccCCCEEEEECC-CHHHHHHHHHHHhCCCCeEEEEeccchHHHHHHhhhhHHHhhhhccCCCEEEE-cCC---H-----
Confidence            4566788999996 9999999999999999 99999998  44444433333322     1112221 112   2     


Q ss_pred             HHHHHHhHcCCccEEEEccccCCcccccccCChHHHHHHHHhhhHHHHHHHHHHhhhhhhcCCeEEEEcC
Q 044010          115 LVEETMNHFGRLDHLVNNAGISSVALFEDIVNITDFKQIMNINFWGSVYTTRFAVPHLRYTKGKIVVLSS  184 (248)
Q Consensus       115 ~~~~~~~~~g~id~vv~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~g~iV~isS  184 (248)
                            +.+.+.|++|.++|.....   . .+   -.+.+..|..-.-.+.+.+.++  ...+.++++|.
T Consensus        74 ------~a~~~aDvVIiaag~p~kp---g-~~---R~dl~~~N~~i~~~i~~~i~~~--~p~a~vlvvsN  128 (315)
T 3tl2_A           74 ------ADTADSDVVVITAGIARKP---G-MS---RDDLVATNSKIMKSITRDIAKH--SPNAIIVVLTN  128 (315)
T ss_dssp             ------GGGTTCSEEEECCSCCCCT---T-CC---HHHHHHHHHHHHHHHHHHHHHH--CTTCEEEECCS
T ss_pred             ------HHhCCCCEEEEeCCCCCCC---C-CC---HHHHHHHHHHHHHHHHHHHHHh--CCCeEEEECCC
Confidence                  2345899999999975322   1 12   2345566666555555555443  13467777774

>3vh1_A Ubiquitin-like modifier-activating enzyme ATG7; autophagy, zinc binding, metal binding protein; 3.00A {Saccharomyces cerevisiae} PDB: 3vh2_A

Probab=96.99  E-value=0.0025  Score=58.63  Aligned_cols=63  Identities=14%  Similarity=0.221  Sum_probs=49.1

Q ss_pred             cCCCCCEEEEcCCCChHHHHHHHHHHHcCC-eEEEEeCC-------------------cchHHHHHHHHHhhCC-CcEEE
Q 044010           43 EDVSGKVVIITGASSGIGEHLAYEYARRGA-CLALCARR-------------------EKSLEEVADTAREIGS-PDVIT  101 (248)
Q Consensus        43 ~~~~~k~~lVtGg~~gIG~aia~~l~~~G~-~V~l~~r~-------------------~~~~~~~~~~l~~~~~-~~v~~  101 (248)
                      .++++++++|.|+ ||+|.++++.|+..|. ++.++|.+                   ..+.+.+.+.+++..+ .++..
T Consensus       323 ~kL~~~kVLIVGa-GGLGs~va~~La~aGVG~ItLvD~D~Ve~SNL~RQ~L~~~~DvG~~KAeaaa~~L~~iNP~v~v~~  401 (598)
T 3vh1_A          323 DIIKNTKVLLLGA-GTLGCYVSRALIAWGVRKITFVDNGTVSYSNPVRQALYNFEDCGKPKAELAAASLKRIFPLMDATG  401 (598)
T ss_dssp             HHHHTCEEEEECC-SHHHHHHHHHHHTTTCCEEEEECCSBCCTTSTTTSTTCCSTTCSSBHHHHHHHHHHHHCTTCEEEE
T ss_pred             HHHhCCeEEEECC-CHHHHHHHHHHHHcCCCEEEEECCCcccccccccccccchhhcCcHHHHHHHHHHHhHCCCcEEEE
Confidence            5788999999977 8999999999999998 89999664                   2477888888888664 34455


Q ss_pred             EEccC
Q 044010          102 IRADV  106 (248)
Q Consensus       102 ~~~D~  106 (248)
                      +..++
T Consensus       402 ~~~~I  406 (598)
T 3vh1_A          402 VKLSI  406 (598)
T ss_dssp             ECCCC
T ss_pred             Eeccc
Confidence            55443

>2jhf_A Alcohol dehydrogenase E chain; oxidoreductase, metal coordination, NAD, zinc, inhibition, acetylation, metal-binding; HET: NAD; 1.0A {Equus caballus} SCOP: b.35.1.2 c.2.1.1 PDB: 1adc_A* 1adf_A* 1adg_A* 1adb_A* 1bto_A* 1heu_A* 1hf3_A* 1hld_A* 1lde_A* 1ldy_A* 1mg0_A* 1n92_A* 1p1r_A* 1ye3_A 1het_A* 2jhg_A* 2ohx_A* 2oxi_A* 3bto_A* 4dwv_A* ...

Probab=96.96  E-value=0.0015  Score=56.71  Aligned_cols=79  Identities=16%  Similarity=0.296  Sum_probs=53.9

Q ss_pred             CCCEEEEcCCCChHHHHHHHHHHHcCC-eEEEEeCCcchHHHHHHHHHhhCCCcEEEEEccCCC-HHHHHHHHHHHHhHc
Q 044010           46 SGKVVIITGASSGIGEHLAYEYARRGA-CLALCARREKSLEEVADTAREIGSPDVITIRADVSK-VDDCRSLVEETMNHF  123 (248)
Q Consensus        46 ~~k~~lVtGg~~gIG~aia~~l~~~G~-~V~l~~r~~~~~~~~~~~l~~~~~~~v~~~~~D~~~-~~~~~~~~~~~~~~~  123 (248)
                      .|+++||+|+ |++|...++.+...|+ +|+.+++++++.+.+    ++.+...    ..|.++ .+++.+.+.++..  
T Consensus       191 ~g~~VlV~Ga-G~vG~~a~qla~~~Ga~~Vi~~~~~~~~~~~~----~~lGa~~----vi~~~~~~~~~~~~~~~~~~--  259 (374)
T 2jhf_A          191 QGSTCAVFGL-GGVGLSVIMGCKAAGAARIIGVDINKDKFAKA----KEVGATE----CVNPQDYKKPIQEVLTEMSN--  259 (374)
T ss_dssp             TTCEEEEECC-SHHHHHHHHHHHHTTCSEEEEECSCGGGHHHH----HHTTCSE----EECGGGCSSCHHHHHHHHTT--
T ss_pred             CCCEEEEECC-CHHHHHHHHHHHHcCCCeEEEEcCCHHHHHHH----HHhCCce----EecccccchhHHHHHHHHhC--
Confidence            5889999995 9999999988888899 899999988776543    2333221    234443 1234444443322  


Q ss_pred             CCccEEEEcccc
Q 044010          124 GRLDHLVNNAGI  135 (248)
Q Consensus       124 g~id~vv~~ag~  135 (248)
                      +.+|+++.++|.
T Consensus       260 ~g~D~vid~~g~  271 (374)
T 2jhf_A          260 GGVDFSFEVIGR  271 (374)
T ss_dssp             SCBSEEEECSCC
T ss_pred             CCCcEEEECCCC
Confidence            479999999874

>3iup_A Putative NADPH:quinone oxidoreductase; YP_296108.1, structur genomics, joint center for structural genomics, JCSG, prote structure initiative; HET: MSE NDP; 1.70A {Ralstonia eutropha}

Probab=96.95  E-value=0.0027  Score=55.27  Aligned_cols=81  Identities=15%  Similarity=0.222  Sum_probs=53.9

Q ss_pred             CCCCEEEEcC-CCChHHHHHHHHHHHcCCeEEEEeCCcchHHHHHHHHHhhCCCcEEEEEccCCCHHHHHHHHHHHHhHc
Q 044010           45 VSGKVVIITG-ASSGIGEHLAYEYARRGACLALCARREKSLEEVADTAREIGSPDVITIRADVSKVDDCRSLVEETMNHF  123 (248)
Q Consensus        45 ~~~k~~lVtG-g~~gIG~aia~~l~~~G~~V~l~~r~~~~~~~~~~~l~~~~~~~v~~~~~D~~~~~~~~~~~~~~~~~~  123 (248)
                      -+|.+++|.| |+|++|...++.+...|++|+.+++++++.+.+    ++.+.+.+    .|.++.+ +.+.+.++... 
T Consensus       169 ~~g~~vlV~gag~G~vG~~a~q~a~~~Ga~Vi~~~~~~~~~~~~----~~lGa~~~----~~~~~~~-~~~~v~~~t~~-  238 (379)
T 3iup_A          169 LEGHSALVHTAAASNLGQMLNQICLKDGIKLVNIVRKQEQADLL----KAQGAVHV----CNAASPT-FMQDLTEALVS-  238 (379)
T ss_dssp             HTTCSCEEESSTTSHHHHHHHHHHHHHTCCEEEEESSHHHHHHH----HHTTCSCE----EETTSTT-HHHHHHHHHHH-
T ss_pred             cCCCEEEEECCCCCHHHHHHHHHHHHCCCEEEEEECCHHHHHHH----HhCCCcEE----EeCCChH-HHHHHHHHhcC-
Confidence            3578899987 899999999888778899999999987665543    33443222    3444433 22222222211 


Q ss_pred             CCccEEEEcccc
Q 044010          124 GRLDHLVNNAGI  135 (248)
Q Consensus       124 g~id~vv~~ag~  135 (248)
                      ..+|+++.++|.
T Consensus       239 ~g~d~v~d~~g~  250 (379)
T 3iup_A          239 TGATIAFDATGG  250 (379)
T ss_dssp             HCCCEEEESCEE
T ss_pred             CCceEEEECCCc
Confidence            269999999985

>4h7p_A Malate dehydrogenase; ssgcid, structural G seattle structural genomics center for infectious disease, oxidoreductase; 1.30A {Leishmania major}

Probab=96.94  E-value=0.016  Score=49.82  Aligned_cols=122  Identities=17%  Similarity=0.119  Sum_probs=70.3

Q ss_pred             cCCCCCEEEEcCCCChHHHHHHHHHHHcCC-------eEEEEeCCcc--hHHHHHHHHHhhCCC-cEEEEEccCCCHHHH
Q 044010           43 EDVSGKVVIITGASSGIGEHLAYEYARRGA-------CLALCARREK--SLEEVADTAREIGSP-DVITIRADVSKVDDC  112 (248)
Q Consensus        43 ~~~~~k~~lVtGg~~gIG~aia~~l~~~G~-------~V~l~~r~~~--~~~~~~~~l~~~~~~-~v~~~~~D~~~~~~~  112 (248)
                      ..++.-++.|+|++|+||+.++..|+....       ++.+.+.++.  .++...-++...... ....+..+  +.   
T Consensus        20 ~s~~~vKVaViGAaG~IG~~la~~la~~~l~~~~~~~eL~L~Di~~~~~~~~Gva~DL~~~~~~~~~~~~~~~--~~---   94 (345)
T 4h7p_A           20 GSMSAVKVAVTGAAGQIGYALVPLIARGALLGPTTPVELRLLDIEPALKALAGVEAELEDCAFPLLDKVVVTA--DP---   94 (345)
T ss_dssp             --CCCEEEEEESTTSHHHHHHHHHHHHTTTTCTTCCEEEEEECCGGGHHHHHHHHHHHHHTTCTTEEEEEEES--CH---
T ss_pred             CCCCCCEEEEECcCcHHHHHHHHHHHhccccCCCCccEEEEECCCCccccchhhhhhhhhcCccCCCcEEEcC--Ch---
Confidence            456777999999999999999999987642       6899888763  334444455544321 22222221  11   


Q ss_pred             HHHHHHHHhHcCCccEEEEccccCCcccccccCChHHHHHHHHhhhHHHHHHHHHHhhhhhhcCCeEEEEcC
Q 044010          113 RSLVEETMNHFGRLDHLVNNAGISSVALFEDIVNITDFKQIMNINFWGSVYTTRFAVPHLRYTKGKIVVLSS  184 (248)
Q Consensus       113 ~~~~~~~~~~~g~id~vv~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~g~iV~isS  184 (248)
                      .       +.+.+-|++|-.||......    .+.+   +.++.|..-.-.+.+.+.++-. ....++.+|.
T Consensus        95 ~-------~a~~~advVvi~aG~prkpG----mtR~---DLl~~Na~I~~~~~~~i~~~a~-~~~~vlvvsN  151 (345)
T 4h7p_A           95 R-------VAFDGVAIAIMCGAFPRKAG----MERK---DLLEMNARIFKEQGEAIAAVAA-SDCRVVVVGN  151 (345)
T ss_dssp             H-------HHTTTCSEEEECCCCCCCTT----CCHH---HHHHHHHHHHHHHHHHHHHHSC-TTCEEEECSS
T ss_pred             H-------HHhCCCCEEEECCCCCCCCC----CCHH---HHHHHhHHHHHHHHHHHHhhcc-CceEEEEeCC
Confidence            1       22458999999999754221    1333   4456666555444444433211 2234555553

>1h2b_A Alcohol dehydrogenase; oxidoreductase, archaea, hyperthermophIle, zinc; HET: OCA NAJ; 1.62A {Aeropyrum pernix} SCOP: b.35.1.2 c.2.1.1

Probab=96.94  E-value=0.0017  Score=56.11  Aligned_cols=77  Identities=19%  Similarity=0.214  Sum_probs=53.2

Q ss_pred             CCCEEEEcCCCChHHHHHHHHHHHc-CCeEEEEeCCcchHHHHHHHHHhhCCCcEEEEEccCCCHHHHHHHHHHHHhHcC
Q 044010           46 SGKVVIITGASSGIGEHLAYEYARR-GACLALCARREKSLEEVADTAREIGSPDVITIRADVSKVDDCRSLVEETMNHFG  124 (248)
Q Consensus        46 ~~k~~lVtGg~~gIG~aia~~l~~~-G~~V~l~~r~~~~~~~~~~~l~~~~~~~v~~~~~D~~~~~~~~~~~~~~~~~~g  124 (248)
                      .|++++|+|+ |++|...++.+... |++|+.+++++++.+.+    ++.+.+.    ..|.++.  +.+.+.++.  .+
T Consensus       186 ~g~~VlV~Ga-G~vG~~avqlak~~~Ga~Vi~~~~~~~~~~~~----~~lGa~~----vi~~~~~--~~~~v~~~~--~g  252 (359)
T 1h2b_A          186 PGAYVAIVGV-GGLGHIAVQLLKVMTPATVIALDVKEEKLKLA----ERLGADH----VVDARRD--PVKQVMELT--RG  252 (359)
T ss_dssp             TTCEEEEECC-SHHHHHHHHHHHHHCCCEEEEEESSHHHHHHH----HHTTCSE----EEETTSC--HHHHHHHHT--TT
T ss_pred             CCCEEEEECC-CHHHHHHHHHHHHcCCCeEEEEeCCHHHHHHH----HHhCCCE----EEeccch--HHHHHHHHh--CC
Confidence            6889999999 89999998877778 99999999987655433    3334322    2355553  333333332  13


Q ss_pred             -CccEEEEcccc
Q 044010          125 -RLDHLVNNAGI  135 (248)
Q Consensus       125 -~id~vv~~ag~  135 (248)
                       .+|++|.++|.
T Consensus       253 ~g~Dvvid~~G~  264 (359)
T 1h2b_A          253 RGVNVAMDFVGS  264 (359)
T ss_dssp             CCEEEEEESSCC
T ss_pred             CCCcEEEECCCC
Confidence             69999999884

>1zsy_A Mitochondrial 2-enoyl thioester reductase; medium-chain dehydrogenase/reductase, oxidoreductase, 2-ENOY thioester reductase; 1.75A {Homo sapiens} PDB: 2vcy_A

Probab=96.94  E-value=0.0017  Score=56.11  Aligned_cols=83  Identities=18%  Similarity=0.293  Sum_probs=50.1

Q ss_pred             CCCEEEEcCCCChHHHHHHHHHHHcCCeEEEEeCCcchHHHHHHHHHhhCCCcEEEEEccCCCHHHHHHHHHHHHhHcCC
Q 044010           46 SGKVVIITGASSGIGEHLAYEYARRGACLALCARREKSLEEVADTAREIGSPDVITIRADVSKVDDCRSLVEETMNHFGR  125 (248)
Q Consensus        46 ~~k~~lVtGg~~gIG~aia~~l~~~G~~V~l~~r~~~~~~~~~~~l~~~~~~~v~~~~~D~~~~~~~~~~~~~~~~~~g~  125 (248)
                      .|.++||+|++|++|...++.+...|++++.+.+..++.++..+.+++.+...+  +  |..+. ..++ +.++.+..++
T Consensus       167 ~g~~VlV~Ga~G~vG~~aiqlak~~Ga~vi~~~~~~~~~~~~~~~~~~lGa~~v--i--~~~~~-~~~~-~~~~~~~~~~  240 (357)
T 1zsy_A          167 PGDSVIQNASNSGVGQAVIQIAAALGLRTINVVRDRPDIQKLSDRLKSLGAEHV--I--TEEEL-RRPE-MKNFFKDMPQ  240 (357)
T ss_dssp             TTCEEEESSTTSHHHHHHHHHHHHHTCEEEEEECCCSCHHHHHHHHHHTTCSEE--E--EHHHH-HSGG-GGGTTSSSCC
T ss_pred             CCCEEEEeCCcCHHHHHHHHHHHHcCCEEEEEecCccchHHHHHHHHhcCCcEE--E--ecCcc-hHHH-HHHHHhCCCC
Confidence            688999999999999998887767899888777665443333444555553222  2  22111 0011 1111111125


Q ss_pred             ccEEEEccc
Q 044010          126 LDHLVNNAG  134 (248)
Q Consensus       126 id~vv~~ag  134 (248)
                      +|+++.++|
T Consensus       241 ~Dvvid~~g  249 (357)
T 1zsy_A          241 PRLALNCVG  249 (357)
T ss_dssp             CSEEEESSC
T ss_pred             ceEEEECCC
Confidence            899999886

>1e3i_A Alcohol dehydrogenase, class II; HET: NAD; 2.08A {Mus musculus} SCOP: b.35.1.2 c.2.1.1 PDB: 1e3e_A* 1e3l_A* 3cos_A*

Probab=96.93  E-value=0.002  Score=56.01  Aligned_cols=79  Identities=15%  Similarity=0.243  Sum_probs=53.6

Q ss_pred             CCCEEEEcCCCChHHHHHHHHHHHcCC-eEEEEeCCcchHHHHHHHHHhhCCCcEEEEEccCCC-HHHHHHHHHHHHhHc
Q 044010           46 SGKVVIITGASSGIGEHLAYEYARRGA-CLALCARREKSLEEVADTAREIGSPDVITIRADVSK-VDDCRSLVEETMNHF  123 (248)
Q Consensus        46 ~~k~~lVtGg~~gIG~aia~~l~~~G~-~V~l~~r~~~~~~~~~~~l~~~~~~~v~~~~~D~~~-~~~~~~~~~~~~~~~  123 (248)
                      .|++++|+|+ |++|...++.+...|+ +|+.+++++++.+.+    ++.+...    ..|.++ .+++.+.+.++..  
T Consensus       195 ~g~~VlV~Ga-G~vG~~aiqlak~~Ga~~Vi~~~~~~~~~~~a----~~lGa~~----vi~~~~~~~~~~~~v~~~~~--  263 (376)
T 1e3i_A          195 PGSTCAVFGL-GCVGLSAIIGCKIAGASRIIAIDINGEKFPKA----KALGATD----CLNPRELDKPVQDVITELTA--  263 (376)
T ss_dssp             TTCEEEEECC-SHHHHHHHHHHHHTTCSEEEEECSCGGGHHHH----HHTTCSE----EECGGGCSSCHHHHHHHHHT--
T ss_pred             CCCEEEEECC-CHHHHHHHHHHHHcCCCeEEEEcCCHHHHHHH----HHhCCcE----EEccccccchHHHHHHHHhC--
Confidence            5889999995 9999999887777899 899999988776543    2333221    234443 1234444443322  


Q ss_pred             CCccEEEEcccc
Q 044010          124 GRLDHLVNNAGI  135 (248)
Q Consensus       124 g~id~vv~~ag~  135 (248)
                      +.+|+++.++|.
T Consensus       264 ~g~Dvvid~~G~  275 (376)
T 1e3i_A          264 GGVDYSLDCAGT  275 (376)
T ss_dssp             SCBSEEEESSCC
T ss_pred             CCccEEEECCCC
Confidence            479999999874

>1pl8_A Human sorbitol dehydrogenase; NAD, oxidoreductase; HET: NAD; 1.90A {Homo sapiens} SCOP: b.35.1.2 c.2.1.1 PDB: 1pl7_A 1pl6_A* 3qe3_A

Probab=96.93  E-value=0.0039  Score=53.70  Aligned_cols=79  Identities=23%  Similarity=0.315  Sum_probs=52.1

Q ss_pred             CCCEEEEcCCCChHHHHHHHHHHHcCC-eEEEEeCCcchHHHHHHHHHhhCCCcEEEEEccCC--CHHHHHHHHHHHHhH
Q 044010           46 SGKVVIITGASSGIGEHLAYEYARRGA-CLALCARREKSLEEVADTAREIGSPDVITIRADVS--KVDDCRSLVEETMNH  122 (248)
Q Consensus        46 ~~k~~lVtGg~~gIG~aia~~l~~~G~-~V~l~~r~~~~~~~~~~~l~~~~~~~v~~~~~D~~--~~~~~~~~~~~~~~~  122 (248)
                      .|.+++|+|+ |++|...++.+...|+ +|+.+++++++.+.    +++.+. .   ...|.+  +.++..+.+.+... 
T Consensus       171 ~g~~VlV~Ga-G~vG~~aiqlak~~Ga~~Vi~~~~~~~~~~~----a~~lGa-~---~vi~~~~~~~~~~~~~i~~~~~-  240 (356)
T 1pl8_A          171 LGHKVLVCGA-GPIGMVTLLVAKAMGAAQVVVTDLSATRLSK----AKEIGA-D---LVLQISKESPQEIARKVEGQLG-  240 (356)
T ss_dssp             TTCEEEEECC-SHHHHHHHHHHHHTTCSEEEEEESCHHHHHH----HHHTTC-S---EEEECSSCCHHHHHHHHHHHHT-
T ss_pred             CCCEEEEECC-CHHHHHHHHHHHHcCCCEEEEECCCHHHHHH----HHHhCC-C---EEEcCcccccchHHHHHHHHhC-
Confidence            5889999996 8999999887777899 89999988765443    333343 2   123554  22333332322222 


Q ss_pred             cCCccEEEEcccc
Q 044010          123 FGRLDHLVNNAGI  135 (248)
Q Consensus       123 ~g~id~vv~~ag~  135 (248)
                       +.+|++|.++|.
T Consensus       241 -~g~D~vid~~g~  252 (356)
T 1pl8_A          241 -CKPEVTIECTGA  252 (356)
T ss_dssp             -SCCSEEEECSCC
T ss_pred             -CCCCEEEECCCC
Confidence             479999999873

>4aj2_A L-lactate dehydrogenase A chain; oxidoreductase-inhibitor complex, fragment-based LEAD genera inhibitors; HET: 52C; 1.75A {Rattus norvegicus} PDB: 4aj1_A* 4aje_A* 4ajh_A* 4aji_A* 4ajj_A* 4ajk_A* 4ajl_A* 4ajn_A* 4ajo_A* 4al4_A* 4aj4_A* 4ajp_A* 1i10_A* 3h3f_A* 9ldt_A* 9ldb_A* 1t2f_A* 1i0z_A* 5ldh_A* 1ldm_A* ...

Probab=96.93  E-value=0.011  Score=50.59  Aligned_cols=119  Identities=13%  Similarity=0.078  Sum_probs=75.6

Q ss_pred             CCCCCEEEEcCCCChHHHHHHHHHHHcCC--eEEEEeCCcchHHHHHHHHHhhC--CCcEEEEEccCCCHHHHHHHHHHH
Q 044010           44 DVSGKVVIITGASSGIGEHLAYEYARRGA--CLALCARREKSLEEVADTAREIG--SPDVITIRADVSKVDDCRSLVEET  119 (248)
Q Consensus        44 ~~~~k~~lVtGg~~gIG~aia~~l~~~G~--~V~l~~r~~~~~~~~~~~l~~~~--~~~v~~~~~D~~~~~~~~~~~~~~  119 (248)
                      ..+.+++.|+|+ |.+|.+++..|+.+|.  +|++.++++++++.....+....  ......+..  .|.          
T Consensus        16 ~~~~~kV~ViGa-G~vG~~~a~~l~~~~~~~el~L~Di~~~~~~g~a~DL~~~~~~~~~~~i~~~--~d~----------   82 (331)
T 4aj2_A           16 QVPQNKITVVGV-GAVGMACAISILMKDLADELALVDVIEDKLKGEMMDLQHGSLFLKTPKIVSS--KDY----------   82 (331)
T ss_dssp             -CCSSEEEEECC-SHHHHHHHHHHHHTTCCSEEEEECSCHHHHHHHHHHHHHTGGGCSCCEEEEC--SSG----------
T ss_pred             cCCCCEEEEECC-CHHHHHHHHHHHhCCCCceEEEEeCChHHHHHHHHhhhhhhhccCCCeEEEc--CCH----------
Confidence            567788999997 9999999999999987  89999999887777666666431  111122222  122          


Q ss_pred             HhHcCCccEEEEccccCCcccccccCChHHHHHHHHhhhHHHHHHHHHHhhhhhhcCCeEEEEcCc
Q 044010          120 MNHFGRLDHLVNNAGISSVALFEDIVNITDFKQIMNINFWGSVYTTRFAVPHLRYTKGKIVVLSSA  185 (248)
Q Consensus       120 ~~~~g~id~vv~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~g~iV~isS~  185 (248)
                       +.+.+-|++|.+||.....   .+ +..   +.++.|..-...+.+.+..+  ...+.++++|.-
T Consensus        83 -~~~~~aDiVvi~aG~~~kp---G~-tR~---dL~~~N~~I~~~i~~~i~~~--~p~a~vlvvtNP  138 (331)
T 4aj2_A           83 -SVTANSKLVIITAGARQQE---GE-SRL---NLVQRNVNIFKFIIPNVVKY--SPQCKLLIVSNP  138 (331)
T ss_dssp             -GGGTTEEEEEECCSCCCCT---TC-CGG---GGHHHHHHHHHHHHHHHHHH--CTTCEEEECSSS
T ss_pred             -HHhCCCCEEEEccCCCCCC---Cc-cHH---HHHHHHHHHHHHHHHHHHHH--CCCeEEEEecCh
Confidence             1234899999999975322   11 222   34555655555555555443  134677777753

>1x13_A NAD(P) transhydrogenase subunit alpha; NAD(H)-binding domain, rossmann fold, oxidoreductase; 1.90A {Escherichia coli} PDB: 1x14_A* 1x15_A* 2bru_A*

Probab=96.92  E-value=0.0028  Score=55.81  Aligned_cols=43  Identities=23%  Similarity=0.188  Sum_probs=38.2

Q ss_pred             CCCCCEEEEcCCCChHHHHHHHHHHHcCCeEEEEeCCcchHHHH
Q 044010           44 DVSGKVVIITGASSGIGEHLAYEYARRGACLALCARREKSLEEV   87 (248)
Q Consensus        44 ~~~~k~~lVtGg~~gIG~aia~~l~~~G~~V~l~~r~~~~~~~~   87 (248)
                      ++.+++++|+|+ |.+|..+++.+...|++|++.+++.++.+..
T Consensus       169 ~l~g~~V~ViGa-G~iG~~aa~~a~~~Ga~V~v~D~~~~~~~~~  211 (401)
T 1x13_A          169 KVPPAKVMVIGA-GVAGLAAIGAANSLGAIVRAFDTRPEVKEQV  211 (401)
T ss_dssp             EECCCEEEEECC-SHHHHHHHHHHHHTTCEEEEECSCGGGHHHH
T ss_pred             CcCCCEEEEECC-CHHHHHHHHHHHHCCCEEEEEcCCHHHHHHH
Confidence            477999999996 8999999999999999999999998876654

>3u62_A Shikimate dehydrogenase; shikimate pathway, oxidoreductase; 1.45A {Thermotoga maritima}

Probab=96.91  E-value=0.00067  Score=56.03  Aligned_cols=71  Identities=17%  Similarity=0.280  Sum_probs=49.7

Q ss_pred             CCCCCEEEEcCCCChHHHHHHHHHHHcCC-eEEEEeCCcchHHHHHHHHHhhCCCcEEEEEccCCCHHHHHHHHHHHHhH
Q 044010           44 DVSGKVVIITGASSGIGEHLAYEYARRGA-CLALCARREKSLEEVADTAREIGSPDVITIRADVSKVDDCRSLVEETMNH  122 (248)
Q Consensus        44 ~~~~k~~lVtGg~~gIG~aia~~l~~~G~-~V~l~~r~~~~~~~~~~~l~~~~~~~v~~~~~D~~~~~~~~~~~~~~~~~  122 (248)
                      ++++ +++|.|+ ||.|++++..|++.|+ +|.+.+|+.++.++..++    .    ....     .+++.+.+      
T Consensus       106 ~~~~-~vliiGa-Gg~a~ai~~~L~~~G~~~I~v~nR~~~ka~~la~~----~----~~~~-----~~~~~~~~------  164 (253)
T 3u62_A          106 EVKE-PVVVVGA-GGAARAVIYALLQMGVKDIWVVNRTIERAKALDFP----V----KIFS-----LDQLDEVV------  164 (253)
T ss_dssp             CCCS-SEEEECC-SHHHHHHHHHHHHTTCCCEEEEESCHHHHHTCCSS----C----EEEE-----GGGHHHHH------
T ss_pred             CCCC-eEEEECc-HHHHHHHHHHHHHcCCCEEEEEeCCHHHHHHHHHH----c----ccCC-----HHHHHhhh------
Confidence            5678 8999986 8999999999999998 899999997655443221    1    1111     22333332      


Q ss_pred             cCCccEEEEccccC
Q 044010          123 FGRLDHLVNNAGIS  136 (248)
Q Consensus       123 ~g~id~vv~~ag~~  136 (248)
                       .+.|++||+....
T Consensus       165 -~~aDiVInatp~g  177 (253)
T 3u62_A          165 -KKAKSLFNTTSVG  177 (253)
T ss_dssp             -HTCSEEEECSSTT
T ss_pred             -cCCCEEEECCCCC
Confidence             2689999987643

>1uuf_A YAHK, zinc-type alcohol dehydrogenase-like protein YAHK; oxidoreductase, zinc binding, oxydoreductase, metal-binding; 1.76A {Escherichia coli} SCOP: b.35.1.2 c.2.1.1

Probab=96.91  E-value=0.0034  Score=54.46  Aligned_cols=74  Identities=19%  Similarity=0.262  Sum_probs=53.0

Q ss_pred             CCCEEEEcCCCChHHHHHHHHHHHcCCeEEEEeCCcchHHHHHHHHHhhCCCcEEEEEccCCCHHHHHHHHHHHHhHcCC
Q 044010           46 SGKVVIITGASSGIGEHLAYEYARRGACLALCARREKSLEEVADTAREIGSPDVITIRADVSKVDDCRSLVEETMNHFGR  125 (248)
Q Consensus        46 ~~k~~lVtGg~~gIG~aia~~l~~~G~~V~l~~r~~~~~~~~~~~l~~~~~~~v~~~~~D~~~~~~~~~~~~~~~~~~g~  125 (248)
                      .|.++||+|+ |++|...++.+...|++|+.+++++++.+.+.+    .+..    ...|..+.+.++    ++.   +.
T Consensus       194 ~g~~VlV~Ga-G~vG~~aiqlak~~Ga~Vi~~~~~~~~~~~a~~----lGa~----~vi~~~~~~~~~----~~~---~g  257 (369)
T 1uuf_A          194 PGKKVGVVGI-GGLGHMGIKLAHAMGAHVVAFTTSEAKREAAKA----LGAD----EVVNSRNADEMA----AHL---KS  257 (369)
T ss_dssp             TTCEEEEECC-SHHHHHHHHHHHHTTCEEEEEESSGGGHHHHHH----HTCS----EEEETTCHHHHH----TTT---TC
T ss_pred             CCCEEEEECC-CHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHH----cCCc----EEeccccHHHHH----Hhh---cC
Confidence            5889999997 899999998777789999999998877665432    3322    124665553222    221   57


Q ss_pred             ccEEEEcccc
Q 044010          126 LDHLVNNAGI  135 (248)
Q Consensus       126 id~vv~~ag~  135 (248)
                      +|++|.++|.
T Consensus       258 ~Dvvid~~g~  267 (369)
T 1uuf_A          258 FDFILNTVAA  267 (369)
T ss_dssp             EEEEEECCSS
T ss_pred             CCEEEECCCC
Confidence            9999999985

>4dvj_A Putative zinc-dependent alcohol dehydrogenase Pro; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; 1.99A {Rhizobium etli}

Probab=96.90  E-value=0.0022  Score=55.56  Aligned_cols=77  Identities=18%  Similarity=0.255  Sum_probs=51.3

Q ss_pred             CCCEEEEcCCCChHHHHHHHHHHH-cCCeEEEEeCCcchHHHHHHHHHhhCCCcEEEEEccCCCHHHHHHHHHHHHhH-c
Q 044010           46 SGKVVIITGASSGIGEHLAYEYAR-RGACLALCARREKSLEEVADTAREIGSPDVITIRADVSKVDDCRSLVEETMNH-F  123 (248)
Q Consensus        46 ~~k~~lVtGg~~gIG~aia~~l~~-~G~~V~l~~r~~~~~~~~~~~l~~~~~~~v~~~~~D~~~~~~~~~~~~~~~~~-~  123 (248)
                      +|+++||+||+|++|...++.+.. .|++|+.+++++++.+.+    ++.+.+.    ..|.++  ++   .+++.+. .
T Consensus       171 ~g~~VlV~Ga~G~vG~~a~qlak~~~g~~Vi~~~~~~~~~~~~----~~lGad~----vi~~~~--~~---~~~v~~~~~  237 (363)
T 4dvj_A          171 AAPAILIVGGAGGVGSIAVQIARQRTDLTVIATASRPETQEWV----KSLGAHH----VIDHSK--PL---AAEVAALGL  237 (363)
T ss_dssp             SEEEEEEESTTSHHHHHHHHHHHHHCCSEEEEECSSHHHHHHH----HHTTCSE----EECTTS--CH---HHHHHTTCS
T ss_pred             CCCEEEEECCCCHHHHHHHHHHHHhcCCEEEEEeCCHHHHHHH----HHcCCCE----EEeCCC--CH---HHHHHHhcC
Confidence            688999999999999887765554 488999999987655443    3344322    234443  22   2333332 2


Q ss_pred             CCccEEEEcccc
Q 044010          124 GRLDHLVNNAGI  135 (248)
Q Consensus       124 g~id~vv~~ag~  135 (248)
                      +.+|+++.++|.
T Consensus       238 ~g~Dvvid~~g~  249 (363)
T 4dvj_A          238 GAPAFVFSTTHT  249 (363)
T ss_dssp             CCEEEEEECSCH
T ss_pred             CCceEEEECCCc
Confidence            479999998873

>1piw_A Hypothetical zinc-type alcohol dehydrogenase- like protein in PRE5-FET4 intergenic...; ADH topology, NADP(H)dependent, oxidoreductase; HET: NAP; 3.00A {Saccharomyces cerevisiae} SCOP: b.35.1.2 c.2.1.1 PDB: 1ps0_A* 1q1n_A

Probab=96.90  E-value=0.0016  Score=56.22  Aligned_cols=75  Identities=24%  Similarity=0.248  Sum_probs=52.2

Q ss_pred             CCCEEEEcCCCChHHHHHHHHHHHcCCeEEEEeCCcchHHHHHHHHHhhCCCcEEEEEccCCCHHHHHHHHHHHHhHcCC
Q 044010           46 SGKVVIITGASSGIGEHLAYEYARRGACLALCARREKSLEEVADTAREIGSPDVITIRADVSKVDDCRSLVEETMNHFGR  125 (248)
Q Consensus        46 ~~k~~lVtGg~~gIG~aia~~l~~~G~~V~l~~r~~~~~~~~~~~l~~~~~~~v~~~~~D~~~~~~~~~~~~~~~~~~g~  125 (248)
                      +|+++||+|+ |++|...++.+...|++|+.+++++++.+.+.+    .+...  +  .|.++..+   ..+++.   +.
T Consensus       179 ~g~~VlV~Ga-G~vG~~~~qlak~~Ga~Vi~~~~~~~~~~~~~~----lGa~~--v--~~~~~~~~---~~~~~~---~~  243 (360)
T 1piw_A          179 PGKKVGIVGL-GGIGSMGTLISKAMGAETYVISRSSRKREDAMK----MGADH--Y--IATLEEGD---WGEKYF---DT  243 (360)
T ss_dssp             TTCEEEEECC-SHHHHHHHHHHHHHTCEEEEEESSSTTHHHHHH----HTCSE--E--EEGGGTSC---HHHHSC---SC
T ss_pred             CCCEEEEECC-CHHHHHHHHHHHHCCCEEEEEcCCHHHHHHHHH----cCCCE--E--EcCcCchH---HHHHhh---cC
Confidence            5889999999 999999988777789999999998887654432    33222  1  34433211   122221   58


Q ss_pred             ccEEEEcccc
Q 044010          126 LDHLVNNAGI  135 (248)
Q Consensus       126 id~vv~~ag~  135 (248)
                      +|++|.++|.
T Consensus       244 ~D~vid~~g~  253 (360)
T 1piw_A          244 FDLIVVCASS  253 (360)
T ss_dssp             EEEEEECCSC
T ss_pred             CCEEEECCCC
Confidence            9999999986

>3p2y_A Alanine dehydrogenase/pyridine nucleotide transhy; seattle structural genomics center for infectious disease, S tuberculosis; 1.82A {Mycobacterium smegmatis str}

Probab=96.89  E-value=0.013  Score=51.10  Aligned_cols=85  Identities=14%  Similarity=0.137  Sum_probs=57.3

Q ss_pred             CCCCCEEEEcCCCChHHHHHHHHHHHcCCeEEEEeCCcchHHHHHHHHHhhCCCcEEEEEccC-----------CCHHHH
Q 044010           44 DVSGKVVIITGASSGIGEHLAYEYARRGACLALCARREKSLEEVADTAREIGSPDVITIRADV-----------SKVDDC  112 (248)
Q Consensus        44 ~~~~k~~lVtGg~~gIG~aia~~l~~~G~~V~l~~r~~~~~~~~~~~l~~~~~~~v~~~~~D~-----------~~~~~~  112 (248)
                      .+++++++|.|+ |.+|..+++.+...|++|++.+|+.++.+...+    .+   ..++..|+           ...+..
T Consensus       181 ~v~~~kV~ViG~-G~iG~~aa~~a~~lGa~V~v~D~~~~~l~~~~~----lG---a~~~~l~~~~~~~~gya~~~~~~~~  252 (381)
T 3p2y_A          181 TVKPASALVLGV-GVAGLQALATAKRLGAKTTGYDVRPEVAEQVRS----VG---AQWLDLGIDAAGEGGYARELSEAER  252 (381)
T ss_dssp             EECCCEEEEESC-SHHHHHHHHHHHHHTCEEEEECSSGGGHHHHHH----TT---CEECCCC-------------CHHHH
T ss_pred             CcCCCEEEEECc-hHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHH----cC---CeEEeccccccccccchhhhhHHHH
Confidence            357899999988 899999999999999999999999887766543    22   12222221           001112


Q ss_pred             HHHHHHHHhHcCCccEEEEccccC
Q 044010          113 RSLVEETMNHFGRLDHLVNNAGIS  136 (248)
Q Consensus       113 ~~~~~~~~~~~g~id~vv~~ag~~  136 (248)
                      ..-.+.+.+...+.|++|.++...
T Consensus       253 ~~~~~~l~e~l~~aDIVI~tv~iP  276 (381)
T 3p2y_A          253 AQQQQALEDAITKFDIVITTALVP  276 (381)
T ss_dssp             HHHHHHHHHHHTTCSEEEECCCCT
T ss_pred             hhhHHHHHHHHhcCCEEEECCCCC
Confidence            233344445556899999987554

>3p7m_A Malate dehydrogenase; putative dehydrogenase, enzyme, structural genomics, center structural genomics of infectious diseases, csgid; 2.20A {Francisella tularensis}

Probab=96.88  E-value=0.029  Score=47.82  Aligned_cols=117  Identities=13%  Similarity=0.082  Sum_probs=73.1

Q ss_pred             CCCCEEEEcCCCChHHHHHHHHHHHcCC-eEEEEeCCcchHHHHHHHHHhhC---CCcEEEEEccCCCHHHHHHHHHHHH
Q 044010           45 VSGKVVIITGASSGIGEHLAYEYARRGA-CLALCARREKSLEEVADTAREIG---SPDVITIRADVSKVDDCRSLVEETM  120 (248)
Q Consensus        45 ~~~k~~lVtGg~~gIG~aia~~l~~~G~-~V~l~~r~~~~~~~~~~~l~~~~---~~~v~~~~~D~~~~~~~~~~~~~~~  120 (248)
                      |+.+++.|+|+ |.+|.+++..|+..|. +|++.++++++.+.....+.+..   +....+...  .+.           
T Consensus         3 m~~~kI~iiGa-G~vG~~~a~~l~~~~~~~v~l~Di~~~~~~g~a~dL~~~~~~~~~~~~v~~t--~d~-----------   68 (321)
T 3p7m_A            3 MARKKITLVGA-GNIGGTLAHLALIKQLGDVVLFDIAQGMPNGKALDLLQTCPIEGVDFKVRGT--NDY-----------   68 (321)
T ss_dssp             CCCCEEEEECC-SHHHHHHHHHHHHTTCCEEEEECSSSSHHHHHHHHHHTTHHHHTCCCCEEEE--SCG-----------
T ss_pred             CCCCEEEEECC-CHHHHHHHHHHHhCCCceEEEEeCChHHHHHHHHHHHhhhhhcCCCcEEEEc--CCH-----------
Confidence            45677888884 9999999999999988 99999999988776555555421   111222211  122           


Q ss_pred             hHcCCccEEEEccccCCcccccccCChHHHHHHHHhhhHHHHHHHHHHhhhhhhcCCeEEEEcC
Q 044010          121 NHFGRLDHLVNNAGISSVALFEDIVNITDFKQIMNINFWGSVYTTRFAVPHLRYTKGKIVVLSS  184 (248)
Q Consensus       121 ~~~g~id~vv~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~g~iV~isS  184 (248)
                      +.+.+-|++|..+|......    .+.   .+.+..|..-.-.+.+.+...-  ..+.++++|.
T Consensus        69 ~a~~~aDvVIi~ag~p~k~G----~~R---~dl~~~N~~i~~~i~~~i~~~~--p~a~vivvtN  123 (321)
T 3p7m_A           69 KDLENSDVVIVTAGVPRKPG----MSR---DDLLGINIKVMQTVGEGIKHNC--PNAFVICITN  123 (321)
T ss_dssp             GGGTTCSEEEECCSCCCCTT----CCH---HHHHHHHHHHHHHHHHHHHHHC--TTCEEEECCS
T ss_pred             HHHCCCCEEEEcCCcCCCCC----CCH---HHHHHHhHHHHHHHHHHHHHHC--CCcEEEEecC
Confidence            22347999999998653221    122   2345556665555555554432  2367777764

>1vj0_A Alcohol dehydrogenase, zinc-containing; TM0436, structural G JCSG, PSI, protein structure initiative, joint center for S genomics; 2.00A {Thermotoga maritima} SCOP: b.35.1.2 c.2.1.1

Probab=96.85  E-value=0.0042  Score=54.08  Aligned_cols=78  Identities=24%  Similarity=0.314  Sum_probs=52.8

Q ss_pred             CCCEEEEcCCCChHHHHHHHHHHHcC-CeEEEEeCCcchHHHHHHHHHhhCCCcEEEEEccCC--CHHHHHHHHHHHHhH
Q 044010           46 SGKVVIITGASSGIGEHLAYEYARRG-ACLALCARREKSLEEVADTAREIGSPDVITIRADVS--KVDDCRSLVEETMNH  122 (248)
Q Consensus        46 ~~k~~lVtGg~~gIG~aia~~l~~~G-~~V~l~~r~~~~~~~~~~~l~~~~~~~v~~~~~D~~--~~~~~~~~~~~~~~~  122 (248)
                      .|+++||+| +|++|...++.+...| ++|+.+++++++.+.+    ++.+...  +  .|..  +.+++.+.   +.+.
T Consensus       195 ~g~~VlV~G-aG~vG~~aiqlak~~Ga~~Vi~~~~~~~~~~~~----~~lGa~~--v--i~~~~~~~~~~~~~---v~~~  262 (380)
T 1vj0_A          195 AGKTVVIQG-AGPLGLFGVVIARSLGAENVIVIAGSPNRLKLA----EEIGADL--T--LNRRETSVEERRKA---IMDI  262 (380)
T ss_dssp             BTCEEEEEC-CSHHHHHHHHHHHHTTBSEEEEEESCHHHHHHH----HHTTCSE--E--EETTTSCHHHHHHH---HHHH
T ss_pred             CCCEEEEEC-cCHHHHHHHHHHHHcCCceEEEEcCCHHHHHHH----HHcCCcE--E--EeccccCcchHHHH---HHHH
Confidence            588999999 8999999998877889 5999999987665433    3334321  2  3443  23343333   3333


Q ss_pred             c-C-CccEEEEcccc
Q 044010          123 F-G-RLDHLVNNAGI  135 (248)
Q Consensus       123 ~-g-~id~vv~~ag~  135 (248)
                      . + .+|++|.++|.
T Consensus       263 ~~g~g~Dvvid~~g~  277 (380)
T 1vj0_A          263 THGRGADFILEATGD  277 (380)
T ss_dssp             TTTSCEEEEEECSSC
T ss_pred             hCCCCCcEEEECCCC
Confidence            2 2 69999999984

>2fzw_A Alcohol dehydrogenase class III CHI chain; S-nitrosoglutathione reductase, glutathione-dependent formaldehyde dehydrogenase, oxidoreductase; HET: NAD; 1.84A {Homo sapiens} SCOP: b.35.1.2 c.2.1.1 PDB: 3qj5_A* 1mc5_A* 2fze_A* 1m6w_A* 1ma0_A* 1mp0_A* 1teh_A* 1m6h_A*

Probab=96.84  E-value=0.0024  Score=55.33  Aligned_cols=79  Identities=16%  Similarity=0.253  Sum_probs=53.4

Q ss_pred             CCCEEEEcCCCChHHHHHHHHHHHcCC-eEEEEeCCcchHHHHHHHHHhhCCCcEEEEEccCCC-HHHHHHHHHHHHhHc
Q 044010           46 SGKVVIITGASSGIGEHLAYEYARRGA-CLALCARREKSLEEVADTAREIGSPDVITIRADVSK-VDDCRSLVEETMNHF  123 (248)
Q Consensus        46 ~~k~~lVtGg~~gIG~aia~~l~~~G~-~V~l~~r~~~~~~~~~~~l~~~~~~~v~~~~~D~~~-~~~~~~~~~~~~~~~  123 (248)
                      .|+++||+|+ |++|...++.+...|+ +|+.+++++++.+.+.    +.+...    ..|.++ .+++.+.+.++..  
T Consensus       190 ~g~~VlV~Ga-G~vG~~avqla~~~Ga~~Vi~~~~~~~~~~~~~----~lGa~~----vi~~~~~~~~~~~~v~~~~~--  258 (373)
T 2fzw_A          190 PGSVCAVFGL-GGVGLAVIMGCKVAGASRIIGVDINKDKFARAK----EFGATE----CINPQDFSKPIQEVLIEMTD--  258 (373)
T ss_dssp             TTCEEEEECC-SHHHHHHHHHHHHHTCSEEEEECSCGGGHHHHH----HHTCSE----EECGGGCSSCHHHHHHHHTT--
T ss_pred             CCCEEEEECC-CHHHHHHHHHHHHcCCCeEEEEcCCHHHHHHHH----HcCCce----EeccccccccHHHHHHHHhC--
Confidence            5889999995 9999999887777899 8999999887765442    233221    234443 1234444443322  


Q ss_pred             CCccEEEEcccc
Q 044010          124 GRLDHLVNNAGI  135 (248)
Q Consensus       124 g~id~vv~~ag~  135 (248)
                      +.+|+++.++|.
T Consensus       259 ~g~D~vid~~g~  270 (373)
T 2fzw_A          259 GGVDYSFECIGN  270 (373)
T ss_dssp             SCBSEEEECSCC
T ss_pred             CCCCEEEECCCc
Confidence            479999999874

>4e12_A Diketoreductase; oxidoreductase, NADH; HET: 1PE; 1.93A {Acinetobacter baylyi} PDB: 4dyd_A* 4e13_A*

Probab=96.82  E-value=0.02  Score=47.64  Aligned_cols=42  Identities=17%  Similarity=0.309  Sum_probs=35.9

Q ss_pred             CEEEEcCCCChHHHHHHHHHHHcCCeEEEEeCCcchHHHHHHH
Q 044010           48 KVVIITGASSGIGEHLAYEYARRGACLALCARREKSLEEVADT   90 (248)
Q Consensus        48 k~~lVtGg~~gIG~aia~~l~~~G~~V~l~~r~~~~~~~~~~~   90 (248)
                      +++.|.|+ |.+|.++|..|++.|++|++.+|+++..++..+.
T Consensus         5 ~kV~VIGa-G~mG~~iA~~la~~G~~V~l~d~~~~~~~~~~~~   46 (283)
T 4e12_A            5 TNVTVLGT-GVLGSQIAFQTAFHGFAVTAYDINTDALDAAKKR   46 (283)
T ss_dssp             CEEEEECC-SHHHHHHHHHHHHTTCEEEEECSSHHHHHHHHHH
T ss_pred             CEEEEECC-CHHHHHHHHHHHhCCCeEEEEeCCHHHHHHHHHH
Confidence            56777765 8899999999999999999999999877766654

>3two_A Mannitol dehydrogenase; cinnamyl-alcohol dehydrogenase, NADP(H) oxidoreductase; HET: NDP; 2.18A {Helicobacter pylori}

Probab=96.81  E-value=0.0024  Score=54.85  Aligned_cols=71  Identities=20%  Similarity=0.355  Sum_probs=51.1

Q ss_pred             CCCCEEEEcCCCChHHHHHHHHHHHcCCeEEEEeCCcchHHHHHHHHHhhCCCcEEEEEccCCCHHHHHHHHHHHHhHcC
Q 044010           45 VSGKVVIITGASSGIGEHLAYEYARRGACLALCARREKSLEEVADTAREIGSPDVITIRADVSKVDDCRSLVEETMNHFG  124 (248)
Q Consensus        45 ~~~k~~lVtGg~~gIG~aia~~l~~~G~~V~l~~r~~~~~~~~~~~l~~~~~~~v~~~~~D~~~~~~~~~~~~~~~~~~g  124 (248)
                      -+|+++||+|+ |++|...++.+...|++|+.+++++++.+.+    ++.+.+.+.      ++.+.+.+          
T Consensus       175 ~~g~~VlV~Ga-G~vG~~a~qla~~~Ga~Vi~~~~~~~~~~~~----~~lGa~~v~------~~~~~~~~----------  233 (348)
T 3two_A          175 TKGTKVGVAGF-GGLGSMAVKYAVAMGAEVSVFARNEHKKQDA----LSMGVKHFY------TDPKQCKE----------  233 (348)
T ss_dssp             CTTCEEEEESC-SHHHHHHHHHHHHTTCEEEEECSSSTTHHHH----HHTTCSEEE------SSGGGCCS----------
T ss_pred             CCCCEEEEECC-cHHHHHHHHHHHHCCCeEEEEeCCHHHHHHH----HhcCCCeec------CCHHHHhc----------
Confidence            36889999997 9999999888878899999999998876643    333432222      33332211          


Q ss_pred             CccEEEEccccC
Q 044010          125 RLDHLVNNAGIS  136 (248)
Q Consensus       125 ~id~vv~~ag~~  136 (248)
                      .+|+++.++|..
T Consensus       234 ~~D~vid~~g~~  245 (348)
T 3two_A          234 ELDFIISTIPTH  245 (348)
T ss_dssp             CEEEEEECCCSC
T ss_pred             CCCEEEECCCcH
Confidence            799999998853

>3uko_A Alcohol dehydrogenase class-3; alcohol dehydrogenase III, homodimer, reduction of GSNO, NAD binding, oxidoreductase; HET: NAD SO4; 1.40A {Arabidopsis thaliana}

Probab=96.78  E-value=0.0027  Score=55.23  Aligned_cols=79  Identities=18%  Similarity=0.178  Sum_probs=53.9

Q ss_pred             CCCEEEEcCCCChHHHHHHHHHHHcCC-eEEEEeCCcchHHHHHHHHHhhCCCcEEEEEccCCC-HHHHHHHHHHHHhHc
Q 044010           46 SGKVVIITGASSGIGEHLAYEYARRGA-CLALCARREKSLEEVADTAREIGSPDVITIRADVSK-VDDCRSLVEETMNHF  123 (248)
Q Consensus        46 ~~k~~lVtGg~~gIG~aia~~l~~~G~-~V~l~~r~~~~~~~~~~~l~~~~~~~v~~~~~D~~~-~~~~~~~~~~~~~~~  123 (248)
                      +|.+++|+|+ |++|...++.+...|+ +|+.+++++++.+.+    ++.+...    ..|..+ .+++.+.+.++.  .
T Consensus       193 ~g~~VlV~Ga-G~vG~~a~q~a~~~Ga~~Vi~~~~~~~~~~~a----~~lGa~~----vi~~~~~~~~~~~~i~~~~--~  261 (378)
T 3uko_A          193 PGSNVAIFGL-GTVGLAVAEGAKTAGASRIIGIDIDSKKYETA----KKFGVNE----FVNPKDHDKPIQEVIVDLT--D  261 (378)
T ss_dssp             TTCCEEEECC-SHHHHHHHHHHHHHTCSCEEEECSCTTHHHHH----HTTTCCE----EECGGGCSSCHHHHHHHHT--T
T ss_pred             CCCEEEEECC-CHHHHHHHHHHHHcCCCeEEEEcCCHHHHHHH----HHcCCcE----EEccccCchhHHHHHHHhc--C
Confidence            5889999998 9999998887778899 899999988776532    3334322    234442 233444444332  2


Q ss_pred             CCccEEEEcccc
Q 044010          124 GRLDHLVNNAGI  135 (248)
Q Consensus       124 g~id~vv~~ag~  135 (248)
                      +.+|+++.++|.
T Consensus       262 gg~D~vid~~g~  273 (378)
T 3uko_A          262 GGVDYSFECIGN  273 (378)
T ss_dssp             SCBSEEEECSCC
T ss_pred             CCCCEEEECCCC
Confidence            479999999874

>2b5w_A Glucose dehydrogenase; nucleotide binding motif, oxidoreductase; HET: FLC NAP; 1.60A {Haloferax mediterranei} PDB: 2b5v_A* 2vwg_A* 2vwh_A* 2vwp_A* 2vwq_A*

Probab=96.76  E-value=0.0028  Score=54.62  Aligned_cols=76  Identities=16%  Similarity=0.327  Sum_probs=51.1

Q ss_pred             CCCCEEEEcCCCChHHHHH-HHHH-HHcCCe-EEEEeCCcc---hHHHHHHHHHhhCCCcEEEEEccCCCHHHHHHHHHH
Q 044010           45 VSGKVVIITGASSGIGEHL-AYEY-ARRGAC-LALCARREK---SLEEVADTAREIGSPDVITIRADVSKVDDCRSLVEE  118 (248)
Q Consensus        45 ~~~k~~lVtGg~~gIG~ai-a~~l-~~~G~~-V~l~~r~~~---~~~~~~~~l~~~~~~~v~~~~~D~~~~~~~~~~~~~  118 (248)
                      +++++++|+|+ |++|... ++.+ ...|++ |+.++++++   +.+.+    ++.+.   ..+  |.++. ++.+ +.+
T Consensus       171 ~~~~~VlV~Ga-G~vG~~a~iqla~k~~Ga~~Vi~~~~~~~~~~~~~~~----~~lGa---~~v--~~~~~-~~~~-i~~  238 (357)
T 2b5w_A          171 WDPSSAFVLGN-GSLGLLTLAMLKVDDKGYENLYCLGRRDRPDPTIDII----EELDA---TYV--DSRQT-PVED-VPD  238 (357)
T ss_dssp             CCCCEEEEECC-SHHHHHHHHHHHHCTTCCCEEEEEECCCSSCHHHHHH----HHTTC---EEE--ETTTS-CGGG-HHH
T ss_pred             CCCCEEEEECC-CHHHHHHHHHHHHHHcCCcEEEEEeCCcccHHHHHHH----HHcCC---ccc--CCCcc-CHHH-HHH
Confidence            44489999999 9999998 6655 457997 999999877   65543    22332   223  65543 2333 443


Q ss_pred             HHhHcCCccEEEEcccc
Q 044010          119 TMNHFGRLDHLVNNAGI  135 (248)
Q Consensus       119 ~~~~~g~id~vv~~ag~  135 (248)
                      +   .+.+|++|.++|.
T Consensus       239 ~---~gg~Dvvid~~g~  252 (357)
T 2b5w_A          239 V---YEQMDFIYEATGF  252 (357)
T ss_dssp             H---SCCEEEEEECSCC
T ss_pred             h---CCCCCEEEECCCC
Confidence            3   2479999999873

>3h5n_A MCCB protein; ubiquitin-activating enzyme, microcin, protein structure, MCCC7, peptide antibiotics, N-P bond formation, transferase; HET: ATP; 1.90A {Escherichia coli} PDB: 3h5r_A 3h9g_A 3h9j_A* 3h9q_A 3h5a_A

Probab=96.74  E-value=0.003  Score=54.66  Aligned_cols=82  Identities=22%  Similarity=0.293  Sum_probs=61.3

Q ss_pred             cCCCCCEEEEcCCCChHHHHHHHHHHHcCC-eEEEEeCCc-------------------chHHHHHHHHHhhCC-CcEEE
Q 044010           43 EDVSGKVVIITGASSGIGEHLAYEYARRGA-CLALCARRE-------------------KSLEEVADTAREIGS-PDVIT  101 (248)
Q Consensus        43 ~~~~~k~~lVtGg~~gIG~aia~~l~~~G~-~V~l~~r~~-------------------~~~~~~~~~l~~~~~-~~v~~  101 (248)
                      .++++++++|.|+ ||+|.++++.|+..|. ++.+++++.                   .+.+.+.+.+++.++ .++..
T Consensus       114 ~~L~~~~VlvvG~-GglGs~va~~La~aGvg~i~lvD~D~Ve~sNL~Rq~l~~~~diG~~Ka~~~~~~l~~~np~v~v~~  192 (353)
T 3h5n_A          114 DKLKNAKVVILGC-GGIGNHVSVILATSGIGEIILIDNDQIENTNLTRQVLFSEDDVGKNKTEVIKRELLKRNSEISVSE  192 (353)
T ss_dssp             HHHHTCEEEEECC-SHHHHHHHHHHHHHTCSEEEEEECCBCCGGGGGTCTTCCGGGTTSBHHHHHHHHHHHHCTTSEEEE
T ss_pred             HHHhCCeEEEECC-CHHHHHHHHHHHhCCCCeEEEECCCcCcccccccccCCChHHCCChHHHHHHHHHHHHCCCCeEEE
Confidence            3677899999987 8999999999999998 899999864                   356667777777654 35666


Q ss_pred             EEccCCCHHHHHHHHHHHHhHcCCccEEEEcc
Q 044010          102 IRADVSKVDDCRSLVEETMNHFGRLDHLVNNA  133 (248)
Q Consensus       102 ~~~D~~~~~~~~~~~~~~~~~~g~id~vv~~a  133 (248)
                      +..+++...++.       + +.+.|+||.+.
T Consensus       193 ~~~~i~~~~~~~-------~-~~~~DlVvd~~  216 (353)
T 3h5n_A          193 IALNINDYTDLH-------K-VPEADIWVVSA  216 (353)
T ss_dssp             EECCCCSGGGGG-------G-SCCCSEEEECC
T ss_pred             eecccCchhhhh-------H-hccCCEEEEec
Confidence            777776654322       2 45788888865

>1p0f_A NADP-dependent alcohol dehydrogenase; ADH topology, NADP(H)-dependent, oxidoreductase; HET: NAP; 1.80A {Rana perezi} SCOP: b.35.1.2 c.2.1.1 PDB: 1p0c_A*

Probab=96.73  E-value=0.0026  Score=55.20  Aligned_cols=79  Identities=19%  Similarity=0.263  Sum_probs=52.6

Q ss_pred             CCCEEEEcCCCChHHHHHHHHHHHcCC-eEEEEeCCcchHHHHHHHHHhhCCCcEEEEEccCCC-HHHHHHHHHHHHhHc
Q 044010           46 SGKVVIITGASSGIGEHLAYEYARRGA-CLALCARREKSLEEVADTAREIGSPDVITIRADVSK-VDDCRSLVEETMNHF  123 (248)
Q Consensus        46 ~~k~~lVtGg~~gIG~aia~~l~~~G~-~V~l~~r~~~~~~~~~~~l~~~~~~~v~~~~~D~~~-~~~~~~~~~~~~~~~  123 (248)
                      .|++++|+|+ |++|...++.+...|+ +|+.+++++++.+.+    ++.+.+.    ..|.++ .+++.+.+.++..  
T Consensus       191 ~g~~VlV~Ga-G~vG~~aiqlak~~Ga~~Vi~~~~~~~~~~~a----~~lGa~~----vi~~~~~~~~~~~~i~~~t~--  259 (373)
T 1p0f_A          191 PGSTCAVFGL-GGVGFSAIVGCKAAGASRIIGVGTHKDKFPKA----IELGATE----CLNPKDYDKPIYEVICEKTN--  259 (373)
T ss_dssp             TTCEEEEECC-SHHHHHHHHHHHHHTCSEEEEECSCGGGHHHH----HHTTCSE----EECGGGCSSCHHHHHHHHTT--
T ss_pred             CCCEEEEECC-CHHHHHHHHHHHHcCCCeEEEECCCHHHHHHH----HHcCCcE----EEecccccchHHHHHHHHhC--
Confidence            5889999995 9999998887777899 899999988776543    2333221    234432 1234333333322  


Q ss_pred             CCccEEEEcccc
Q 044010          124 GRLDHLVNNAGI  135 (248)
Q Consensus       124 g~id~vv~~ag~  135 (248)
                      +.+|++|.++|.
T Consensus       260 gg~Dvvid~~g~  271 (373)
T 1p0f_A          260 GGVDYAVECAGR  271 (373)
T ss_dssp             SCBSEEEECSCC
T ss_pred             CCCCEEEECCCC
Confidence            479999999874

>1lnq_A MTHK channels, potassium channel related protein; rossman fold, helix bundle, membrane protein; 3.30A {Methanothermobacter thermautotrophicusorganism_taxid} SCOP: c.2.1.9 d.286.1.1 f.14.1.1 PDB: 3rbz_A

Probab=96.71  E-value=0.002  Score=55.13  Aligned_cols=71  Identities=14%  Similarity=0.131  Sum_probs=52.6

Q ss_pred             CCEEEEcCCCChHHHHHHHHHHHcCCeEEEEeCCcchHHHHHHHHHhhCCCcEEEEEccCCCHHHHHHHHHHHHhHcCCc
Q 044010           47 GKVVIITGASSGIGEHLAYEYARRGACLALCARREKSLEEVADTAREIGSPDVITIRADVSKVDDCRSLVEETMNHFGRL  126 (248)
Q Consensus        47 ~k~~lVtGg~~gIG~aia~~l~~~G~~V~l~~r~~~~~~~~~~~l~~~~~~~v~~~~~D~~~~~~~~~~~~~~~~~~g~i  126 (248)
                      .++++|.|+ |.+|..+++.|.++|. |+++++++++.+ ..+       ..+.++..|.+|++.++++      ...+.
T Consensus       115 ~~~viI~G~-G~~g~~l~~~L~~~g~-v~vid~~~~~~~-~~~-------~~~~~i~gd~~~~~~L~~a------~i~~a  178 (336)
T 1lnq_A          115 SRHVVICGW-SESTLECLRELRGSEV-FVLAEDENVRKK-VLR-------SGANFVHGDPTRVSDLEKA------NVRGA  178 (336)
T ss_dssp             -CEEEEESC-CHHHHHHHTTGGGSCE-EEEESCGGGHHH-HHH-------TTCEEEESCTTSHHHHHHT------CSTTE
T ss_pred             cCCEEEECC-cHHHHHHHHHHHhCCc-EEEEeCChhhhh-HHh-------CCcEEEEeCCCCHHHHHhc------Chhhc
Confidence            457999987 8999999999999999 999999887655 322       1467888999998777654      11256


Q ss_pred             cEEEEcc
Q 044010          127 DHLVNNA  133 (248)
Q Consensus       127 d~vv~~a  133 (248)
                      |.++...
T Consensus       179 ~~vi~~~  185 (336)
T 1lnq_A          179 RAVIVDL  185 (336)
T ss_dssp             EEEEECC
T ss_pred             cEEEEcC
Confidence            6666554

>2h6e_A ADH-4, D-arabinose 1-dehydrogenase; rossman fold, medium chain alcohol dehydrogenase, oxidoreduc; 1.80A {Sulfolobus solfataricus}

Probab=96.69  E-value=0.0094  Score=50.99  Aligned_cols=77  Identities=17%  Similarity=0.188  Sum_probs=51.7

Q ss_pred             CCCEEEEcCCCChHHHHHHHHHHHc--CCeEEEEeCCcchHHHHHHHHHhhCCCcEEEEEccCCCHHHHHHHHHHHHhHc
Q 044010           46 SGKVVIITGASSGIGEHLAYEYARR--GACLALCARREKSLEEVADTAREIGSPDVITIRADVSKVDDCRSLVEETMNHF  123 (248)
Q Consensus        46 ~~k~~lVtGg~~gIG~aia~~l~~~--G~~V~l~~r~~~~~~~~~~~l~~~~~~~v~~~~~D~~~~~~~~~~~~~~~~~~  123 (248)
                      .|+++||+|+ |++|...++.+...  |++|+.+++++++.+.+    ++.+.+.+    .|..+.   .+..+++.+ .
T Consensus       170 ~g~~VlV~Ga-G~vG~~aiqlak~~~~Ga~Vi~~~~~~~~~~~~----~~lGa~~v----i~~~~~---~~~~~~~~~-g  236 (344)
T 2h6e_A          170 AEPVVIVNGI-GGLAVYTIQILKALMKNITIVGISRSKKHRDFA----LELGADYV----SEMKDA---ESLINKLTD-G  236 (344)
T ss_dssp             SSCEEEEECC-SHHHHHHHHHHHHHCTTCEEEEECSCHHHHHHH----HHHTCSEE----ECHHHH---HHHHHHHHT-T
T ss_pred             CCCEEEEECC-CHHHHHHHHHHHHhcCCCEEEEEeCCHHHHHHH----HHhCCCEE----eccccc---hHHHHHhhc-C
Confidence            7899999999 89999998887788  99999999987665443    23332221    233220   122333322 2


Q ss_pred             CCccEEEEcccc
Q 044010          124 GRLDHLVNNAGI  135 (248)
Q Consensus       124 g~id~vv~~ag~  135 (248)
                      ..+|+++.++|.
T Consensus       237 ~g~D~vid~~g~  248 (344)
T 2h6e_A          237 LGASIAIDLVGT  248 (344)
T ss_dssp             CCEEEEEESSCC
T ss_pred             CCccEEEECCCC
Confidence            279999999874

>3gqv_A Enoyl reductase; medium-chain reductase (MDR superfamily), rossmann fold, NAD binding, oxidoreductase; HET: NAP; 1.74A {Aspergillus terreus} PDB: 3b6z_A* 3b70_A*

Probab=96.69  E-value=0.008  Score=52.11  Aligned_cols=79  Identities=10%  Similarity=0.024  Sum_probs=52.6

Q ss_pred             CCCCEEEEcCCCChHHHHHHHHHHHcCCeEEEEeCCcchHHHHHHHHHhhCCCcEEEEEccCCCHHHHHHHHHHHHhHcC
Q 044010           45 VSGKVVIITGASSGIGEHLAYEYARRGACLALCARREKSLEEVADTAREIGSPDVITIRADVSKVDDCRSLVEETMNHFG  124 (248)
Q Consensus        45 ~~~k~~lVtGg~~gIG~aia~~l~~~G~~V~l~~r~~~~~~~~~~~l~~~~~~~v~~~~~D~~~~~~~~~~~~~~~~~~g  124 (248)
                      -+|++++|+|++|++|...++.+...|++|+.+. ++++.+    .+++.+..    ...|.++.+ +.+.+.++.  .+
T Consensus       163 ~~g~~VlV~Ga~G~vG~~a~qla~~~Ga~Vi~~~-~~~~~~----~~~~lGa~----~vi~~~~~~-~~~~v~~~t--~g  230 (371)
T 3gqv_A          163 SKPVYVLVYGGSTATATVTMQMLRLSGYIPIATC-SPHNFD----LAKSRGAE----EVFDYRAPN-LAQTIRTYT--KN  230 (371)
T ss_dssp             SSCCEEEEESTTSHHHHHHHHHHHHTTCEEEEEE-CGGGHH----HHHHTTCS----EEEETTSTT-HHHHHHHHT--TT
T ss_pred             CCCcEEEEECCCcHHHHHHHHHHHHCCCEEEEEe-CHHHHH----HHHHcCCc----EEEECCCch-HHHHHHHHc--cC
Confidence            5789999999999999999988888999988876 455443    23333432    223555543 322232221  24


Q ss_pred             CccEEEEcccc
Q 044010          125 RLDHLVNNAGI  135 (248)
Q Consensus       125 ~id~vv~~ag~  135 (248)
                      ++|+++.++|.
T Consensus       231 ~~d~v~d~~g~  241 (371)
T 3gqv_A          231 NLRYALDCITN  241 (371)
T ss_dssp             CCCEEEESSCS
T ss_pred             CccEEEECCCc
Confidence            69999999884

>1l7d_A Nicotinamide nucleotide transhydrogenase, subunit alpha 1; transhydrogenase domain I, oxidoreductase; 1.81A {Rhodospirillum rubrum} SCOP: c.2.1.4 c.23.12.2 PDB: 1hzz_A* 1f8g_A 1l7e_A* 1u28_A* 1u2d_A* 1u2g_A* 1xlt_A* 2oo5_A* 2oor_A* 2frd_A* 2fsv_A* 1nm5_A* 2fr8_A* 1ptj_A*

Probab=96.67  E-value=0.0048  Score=53.92  Aligned_cols=43  Identities=23%  Similarity=0.227  Sum_probs=38.2

Q ss_pred             CCCCCEEEEcCCCChHHHHHHHHHHHcCCeEEEEeCCcchHHHH
Q 044010           44 DVSGKVVIITGASSGIGEHLAYEYARRGACLALCARREKSLEEV   87 (248)
Q Consensus        44 ~~~~k~~lVtGg~~gIG~aia~~l~~~G~~V~l~~r~~~~~~~~   87 (248)
                      ++.+++++|+|+ |++|..+++.+...|++|++.+|+..+.+..
T Consensus       169 ~l~g~~V~ViGa-G~iG~~aa~~a~~~Ga~V~~~d~~~~~~~~~  211 (384)
T 1l7d_A          169 TVPPARVLVFGV-GVAGLQAIATAKRLGAVVMATDVRAATKEQV  211 (384)
T ss_dssp             EECCCEEEEECC-SHHHHHHHHHHHHTTCEEEEECSCSTTHHHH
T ss_pred             CCCCCEEEEECC-CHHHHHHHHHHHHCCCEEEEEeCCHHHHHHH
Confidence            678999999996 8999999999999999999999998776654

>3tqh_A Quinone oxidoreductase; HET: NDP; 2.44A {Coxiella burnetii}

Probab=96.64  E-value=0.0063  Score=51.58  Aligned_cols=75  Identities=16%  Similarity=0.228  Sum_probs=51.1

Q ss_pred             CCCCEEEEcCCCChHHHHHHHHHHHcCCeEEEEeCCcchHHHHHHHHHhhCCCcEEEEEccCCCHHHHHHHHHHHHhHcC
Q 044010           45 VSGKVVIITGASSGIGEHLAYEYARRGACLALCARREKSLEEVADTAREIGSPDVITIRADVSKVDDCRSLVEETMNHFG  124 (248)
Q Consensus        45 ~~~k~~lVtGg~~gIG~aia~~l~~~G~~V~l~~r~~~~~~~~~~~l~~~~~~~v~~~~~D~~~~~~~~~~~~~~~~~~g  124 (248)
                      -+|.+++|+||+|++|...++.+...|++|+.++++. +    .+.+++.+...    ..|..+.+.+.       +...
T Consensus       151 ~~g~~vlV~Ga~G~vG~~a~q~a~~~Ga~vi~~~~~~-~----~~~~~~lGa~~----~i~~~~~~~~~-------~~~~  214 (321)
T 3tqh_A          151 KQGDVVLIHAGAGGVGHLAIQLAKQKGTTVITTASKR-N----HAFLKALGAEQ----CINYHEEDFLL-------AIST  214 (321)
T ss_dssp             CTTCEEEESSTTSHHHHHHHHHHHHTTCEEEEEECHH-H----HHHHHHHTCSE----EEETTTSCHHH-------HCCS
T ss_pred             CCCCEEEEEcCCcHHHHHHHHHHHHcCCEEEEEeccc-h----HHHHHHcCCCE----EEeCCCcchhh-------hhcc
Confidence            3688999999999999999998888999998887532 2    23334444322    23555443222       1225


Q ss_pred             CccEEEEcccc
Q 044010          125 RLDHLVNNAGI  135 (248)
Q Consensus       125 ~id~vv~~ag~  135 (248)
                      .+|+++.++|.
T Consensus       215 g~D~v~d~~g~  225 (321)
T 3tqh_A          215 PVDAVIDLVGG  225 (321)
T ss_dssp             CEEEEEESSCH
T ss_pred             CCCEEEECCCc
Confidence            79999999873

>3d0o_A L-LDH 1, L-lactate dehydrogenase 1; cytoplasm, glycolysis, NAD, oxidoreductase, phosphoprotein; 1.80A {Staphylococcus aureus} PDB: 3d4p_A* 3h3j_A*

Probab=96.62  E-value=0.035  Score=47.08  Aligned_cols=117  Identities=12%  Similarity=0.104  Sum_probs=71.6

Q ss_pred             CCCCCEEEEcCCCChHHHHHHHHHHHcCC--eEEEEeCCcchHHHHHHHHHhhC---CCcEEEEEccCCCHHHHHHHHHH
Q 044010           44 DVSGKVVIITGASSGIGEHLAYEYARRGA--CLALCARREKSLEEVADTAREIG---SPDVITIRADVSKVDDCRSLVEE  118 (248)
Q Consensus        44 ~~~~k~~lVtGg~~gIG~aia~~l~~~G~--~V~l~~r~~~~~~~~~~~l~~~~---~~~v~~~~~D~~~~~~~~~~~~~  118 (248)
                      +++..++.|+|+ |.+|.+++..|+.+|.  +|++.++++++++.....+....   +..+.+.. |  +.         
T Consensus         3 ~m~~~KI~IIGa-G~vG~~la~~l~~~~~~~ei~L~Di~~~~~~g~~~dl~~~~~~~~~~~~v~~-~--~~---------   69 (317)
T 3d0o_A            3 KFKGNKVVLIGN-GAVGSSYAFSLVNQSIVDELVIIDLDTEKVRGDVMDLKHATPYSPTTVRVKA-G--EY---------   69 (317)
T ss_dssp             -CCCCEEEEECC-SHHHHHHHHHHHHHCSCSEEEEECSCHHHHHHHHHHHHHHGGGSSSCCEEEE-C--CG---------
T ss_pred             CCCCCEEEEECC-CHHHHHHHHHHHhCCCCCEEEEEeCChhHhhhhhhhHHhhhhhcCCCeEEEe-C--CH---------
Confidence            355678999998 9999999999998884  89999998876665444443321   11233322 2  22         


Q ss_pred             HHhHcCCccEEEEccccCCcccccccCChHHHHHHHHhhhHHHHHHHHHHhhhhhhcCCeEEEEcC
Q 044010          119 TMNHFGRLDHLVNNAGISSVALFEDIVNITDFKQIMNINFWGSVYTTRFAVPHLRYTKGKIVVLSS  184 (248)
Q Consensus       119 ~~~~~g~id~vv~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~g~iV~isS  184 (248)
                        +.+.+-|++|..+|......    .+.   ...+..|..-...+.+.+.++  ...+.++++|.
T Consensus        70 --~a~~~aDvVvi~ag~~~~~g----~~r---~dl~~~n~~i~~~i~~~i~~~--~p~a~viv~tN  124 (317)
T 3d0o_A           70 --SDCHDADLVVICAGAAQKPG----ETR---LDLVSKNLKIFKSIVGEVMAS--KFDGIFLVATN  124 (317)
T ss_dssp             --GGGTTCSEEEECCCCCCCTT----CCH---HHHHHHHHHHHHHHHHHHHHT--TCCSEEEECSS
T ss_pred             --HHhCCCCEEEECCCCCCCCC----CcH---HHHHHHHHHHHHHHHHHHHHh--CCCcEEEEecC
Confidence              22348999999998753221    122   234555555555555554444  23467777654

>2cf5_A Atccad5, CAD, cinnamyl alcohol dehydrogenase; lignin biosynthesis, metal-binding, NADP, oxidoreductase, zinc; 2.0A {Arabidopsis thaliana} PDB: 2cf6_A*

Probab=96.62  E-value=0.0034  Score=54.18  Aligned_cols=75  Identities=19%  Similarity=0.197  Sum_probs=52.2

Q ss_pred             CCCEEEEcCCCChHHHHHHHHHHHcCCeEEEEeCCcchHHHHHHHHHhhCCCcEEEEEccCCCHHHHHHHHHHHHhHcCC
Q 044010           46 SGKVVIITGASSGIGEHLAYEYARRGACLALCARREKSLEEVADTAREIGSPDVITIRADVSKVDDCRSLVEETMNHFGR  125 (248)
Q Consensus        46 ~~k~~lVtGg~~gIG~aia~~l~~~G~~V~l~~r~~~~~~~~~~~l~~~~~~~v~~~~~D~~~~~~~~~~~~~~~~~~g~  125 (248)
                      +|.+++|+|+ |++|...++.+...|++|+.+++++++.+.+.+   +.+...+    .|..+.+.+.       +..+.
T Consensus       180 ~g~~VlV~Ga-G~vG~~a~qlak~~Ga~Vi~~~~~~~~~~~~~~---~lGa~~v----i~~~~~~~~~-------~~~~g  244 (357)
T 2cf5_A          180 PGLRGGILGL-GGVGHMGVKIAKAMGHHVTVISSSNKKREEALQ---DLGADDY----VIGSDQAKMS-------ELADS  244 (357)
T ss_dssp             TTCEEEEECC-SHHHHHHHHHHHHHTCEEEEEESSTTHHHHHHT---TSCCSCE----EETTCHHHHH-------HSTTT
T ss_pred             CCCEEEEECC-CHHHHHHHHHHHHCCCeEEEEeCChHHHHHHHH---HcCCcee----eccccHHHHH-------HhcCC
Confidence            6889999985 999999998777789999999998876554331   2332222    3555543222       22247


Q ss_pred             ccEEEEcccc
Q 044010          126 LDHLVNNAGI  135 (248)
Q Consensus       126 id~vv~~ag~  135 (248)
                      +|+++.++|.
T Consensus       245 ~D~vid~~g~  254 (357)
T 2cf5_A          245 LDYVIDTVPV  254 (357)
T ss_dssp             EEEEEECCCS
T ss_pred             CCEEEECCCC
Confidence            9999999985

>4ej6_A Putative zinc-binding dehydrogenase; structural genomics, nysgrc, PSI-biology, NEW YORK structura genomics research consortium; 1.89A {Sinorhizobium meliloti} PDB: 4ejm_A*

Probab=96.59  E-value=0.0039  Score=54.10  Aligned_cols=80  Identities=25%  Similarity=0.288  Sum_probs=51.5

Q ss_pred             CCCEEEEcCCCChHHHHHHHHHHHcCC-eEEEEeCCcchHHHHHHHHHhhCCCcEEEEEccCCCHHHHHHHHHHHH-hHc
Q 044010           46 SGKVVIITGASSGIGEHLAYEYARRGA-CLALCARREKSLEEVADTAREIGSPDVITIRADVSKVDDCRSLVEETM-NHF  123 (248)
Q Consensus        46 ~~k~~lVtGg~~gIG~aia~~l~~~G~-~V~l~~r~~~~~~~~~~~l~~~~~~~v~~~~~D~~~~~~~~~~~~~~~-~~~  123 (248)
                      .|+++||+|+ |++|...++.+...|+ +|+.+++++++.+.    .++.+..    ...|.++.+ +.+.+.+.. ...
T Consensus       182 ~g~~VlV~Ga-G~vG~~aiqlak~~Ga~~Vi~~~~~~~~~~~----a~~lGa~----~vi~~~~~~-~~~~i~~~~~~~~  251 (370)
T 4ej6_A          182 AGSTVAILGG-GVIGLLTVQLARLAGATTVILSTRQATKRRL----AEEVGAT----ATVDPSAGD-VVEAIAGPVGLVP  251 (370)
T ss_dssp             TTCEEEEECC-SHHHHHHHHHHHHTTCSEEEEECSCHHHHHH----HHHHTCS----EEECTTSSC-HHHHHHSTTSSST
T ss_pred             CCCEEEEECC-CHHHHHHHHHHHHcCCCEEEEECCCHHHHHH----HHHcCCC----EEECCCCcC-HHHHHHhhhhccC
Confidence            5889999998 8999998887778899 88888888765442    2333432    224555543 222222110 112


Q ss_pred             CCccEEEEcccc
Q 044010          124 GRLDHLVNNAGI  135 (248)
Q Consensus       124 g~id~vv~~ag~  135 (248)
                      +++|+++.++|.
T Consensus       252 gg~Dvvid~~G~  263 (370)
T 4ej6_A          252 GGVDVVIECAGV  263 (370)
T ss_dssp             TCEEEEEECSCC
T ss_pred             CCCCEEEECCCC
Confidence            479999999873

>1y6j_A L-lactate dehydrogenase; southeast collaboratory for structural genomics, secsg, protein struc initiative, PSI, oxidoreductase; 3.01A {Clostridium thermocellum} SCOP: c.2.1.5 d.162.1.1

Probab=96.59  E-value=0.014  Score=49.62  Aligned_cols=146  Identities=19%  Similarity=0.125  Sum_probs=81.1

Q ss_pred             CCEEEEcCCCChHHHHHHHHHHHcCC--eEEEEeCCcchHHHHHHHHHhhC--CCcEEEEEccCCCHHHHHHHHHHHHhH
Q 044010           47 GKVVIITGASSGIGEHLAYEYARRGA--CLALCARREKSLEEVADTAREIG--SPDVITIRADVSKVDDCRSLVEETMNH  122 (248)
Q Consensus        47 ~k~~lVtGg~~gIG~aia~~l~~~G~--~V~l~~r~~~~~~~~~~~l~~~~--~~~v~~~~~D~~~~~~~~~~~~~~~~~  122 (248)
                      ..++.|+|+ |.+|..++..|+.+|.  +|++.+.++++++.....+.+..  ...+.+. .  .+.           +.
T Consensus         7 ~~KI~IiGa-G~vG~~~a~~l~~~~~~~ev~L~Di~~~~~~g~~~dl~~~~~~~~~~~i~-~--~~~-----------~a   71 (318)
T 1y6j_A            7 RSKVAIIGA-GFVGASAAFTMALRQTANELVLIDVFKEKAIGEAMDINHGLPFMGQMSLY-A--GDY-----------SD   71 (318)
T ss_dssp             CCCEEEECC-SHHHHHHHHHHHHTTCSSEEEEECCC---CCHHHHHHTTSCCCTTCEEEC-----CG-----------GG
T ss_pred             CCEEEEECC-CHHHHHHHHHHHhCCCCCEEEEEeCChHHHHHHHHHHHHhHHhcCCeEEE-E--CCH-----------HH
Confidence            356888898 9999999999999987  89999999877665555554432  1122222 1  122           23


Q ss_pred             cCCccEEEEccccCCcccccccCChHHHHHHHHhhhHHHHHHHHHHhhhhhhcCCeEEEEcCccccc--------cCCCC
Q 044010          123 FGRLDHLVNNAGISSVALFEDIVNITDFKQIMNINFWGSVYTTRFAVPHLRYTKGKIVVLSSAASWL--------TAPRM  194 (248)
Q Consensus       123 ~g~id~vv~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~g~iV~isS~~~~~--------~~~~~  194 (248)
                      +.+-|++|..+|.....   . .+   -.+.+..|..-...+.+.+.++  ..++.++++|.-....        +.|..
T Consensus        72 ~~~aDvVii~~g~p~k~---g-~~---r~dl~~~n~~i~~~i~~~i~~~--~p~a~viv~tNPv~~~~~~~~k~s~~p~~  142 (318)
T 1y6j_A           72 VKDCDVIVVTAGANRKP---G-ET---RLDLAKKNVMIAKEVTQNIMKY--YNHGVILVVSNPVDIITYMIQKWSGLPVG  142 (318)
T ss_dssp             GTTCSEEEECCCC----------C---HHHHHHHHHHHHHHHHHHHHHH--CCSCEEEECSSSHHHHHHHHHHHHTCCTT
T ss_pred             hCCCCEEEEcCCCCCCC---C-cC---HHHHHHhhHHHHHHHHHHHHHh--CCCcEEEEecCcHHHHHHHHHHHcCCCHH
Confidence            45899999999874321   1 12   2344566666666666665544  2346777754432221        12322


Q ss_pred             ccchH-HHHHHHHHHHHHHHHhC
Q 044010          195 SFYNA-SKAALVLFFETLRVELG  216 (248)
Q Consensus       195 ~~Y~~-sKaal~~l~~~la~~~~  216 (248)
                      -..+. +-.--..+-..++..++
T Consensus       143 rviG~gt~Ld~~r~~~~la~~lg  165 (318)
T 1y6j_A          143 KVIGSGTVLDSIRFRYLLSEKLG  165 (318)
T ss_dssp             TEEECTTHHHHHHHHHHHHTTTT
T ss_pred             HEeccCCchHHHHHHHHHHHHhC
Confidence            33333 33333455566666664

>3ip1_A Alcohol dehydrogenase, zinc-containing; structural genomics, metal-binding, oxidoreductase, PSI-2, protein structure initiative; 2.09A {Thermotoga maritima}

Probab=96.56  E-value=0.0054  Score=53.80  Aligned_cols=78  Identities=22%  Similarity=0.279  Sum_probs=52.4

Q ss_pred             CCCCEEEEcCCCChHHHHHHHHHHHcCC-eEEEEeCCcchHHHHHHHHHhhCCCcEEEEEccCCCHHHHHHHHHHHHhHc
Q 044010           45 VSGKVVIITGASSGIGEHLAYEYARRGA-CLALCARREKSLEEVADTAREIGSPDVITIRADVSKVDDCRSLVEETMNHF  123 (248)
Q Consensus        45 ~~~k~~lVtGg~~gIG~aia~~l~~~G~-~V~l~~r~~~~~~~~~~~l~~~~~~~v~~~~~D~~~~~~~~~~~~~~~~~~  123 (248)
                      -.|.++||+|+ |++|...++.+...|+ +|+.+++++++.+.+    ++.+..    ...|.++.+ +.   +++.+..
T Consensus       212 ~~g~~VlV~Ga-G~vG~~aiqlak~~Ga~~Vi~~~~~~~~~~~~----~~lGa~----~vi~~~~~~-~~---~~i~~~t  278 (404)
T 3ip1_A          212 RPGDNVVILGG-GPIGLAAVAILKHAGASKVILSEPSEVRRNLA----KELGAD----HVIDPTKEN-FV---EAVLDYT  278 (404)
T ss_dssp             CTTCEEEEECC-SHHHHHHHHHHHHTTCSEEEEECSCHHHHHHH----HHHTCS----EEECTTTSC-HH---HHHHHHT
T ss_pred             CCCCEEEEECC-CHHHHHHHHHHHHcCCCEEEEECCCHHHHHHH----HHcCCC----EEEcCCCCC-HH---HHHHHHh
Confidence            36889999998 8999998887778899 899998887655433    333432    223554433 22   2233322


Q ss_pred             -C-CccEEEEcccc
Q 044010          124 -G-RLDHLVNNAGI  135 (248)
Q Consensus       124 -g-~id~vv~~ag~  135 (248)
                       | .+|+++.++|.
T Consensus       279 ~g~g~D~vid~~g~  292 (404)
T 3ip1_A          279 NGLGAKLFLEATGV  292 (404)
T ss_dssp             TTCCCSEEEECSSC
T ss_pred             CCCCCCEEEECCCC
Confidence             2 69999999874

>4g65_A TRK system potassium uptake protein TRKA; structural genomics, center for structural genomics of infec diseases, csgid, niaid; HET: MSE; 2.09A {Vibrio vulnificus}

Probab=96.54  E-value=0.0028  Score=56.80  Aligned_cols=72  Identities=22%  Similarity=0.262  Sum_probs=55.7

Q ss_pred             EEEEcCCCChHHHHHHHHHHHcCCeEEEEeCCcchHHHHHHHHHhhCCCcEEEEEccCCCHHHHHHHHHHHHhHcCCccE
Q 044010           49 VVIITGASSGIGEHLAYEYARRGACLALCARREKSLEEVADTAREIGSPDVITIRADVSKVDDCRSLVEETMNHFGRLDH  128 (248)
Q Consensus        49 ~~lVtGg~~gIG~aia~~l~~~G~~V~l~~r~~~~~~~~~~~l~~~~~~~v~~~~~D~~~~~~~~~~~~~~~~~~g~id~  128 (248)
                      +++|.|+ |-+|+.+|+.|.++|++|++++++++..+...+.+      .+..+..|.++.+.++++=      ..+-|.
T Consensus         5 ~iiI~G~-G~vG~~la~~L~~~~~~v~vId~d~~~~~~~~~~~------~~~~i~Gd~~~~~~L~~Ag------i~~ad~   71 (461)
T 4g65_A            5 KIIILGA-GQVGGTLAENLVGENNDITIVDKDGDRLRELQDKY------DLRVVNGHASHPDVLHEAG------AQDADM   71 (461)
T ss_dssp             EEEEECC-SHHHHHHHHHTCSTTEEEEEEESCHHHHHHHHHHS------SCEEEESCTTCHHHHHHHT------TTTCSE
T ss_pred             EEEEECC-CHHHHHHHHHHHHCCCCEEEEECCHHHHHHHHHhc------CcEEEEEcCCCHHHHHhcC------CCcCCE
Confidence            5777776 89999999999999999999999987766655433      4678899999998776551      126777


Q ss_pred             EEEcc
Q 044010          129 LVNNA  133 (248)
Q Consensus       129 vv~~a  133 (248)
                      +|...
T Consensus        72 ~ia~t   76 (461)
T 4g65_A           72 LVAVT   76 (461)
T ss_dssp             EEECC
T ss_pred             EEEEc
Confidence            76554

>3tri_A Pyrroline-5-carboxylate reductase; amino acid biosynthesis, oxidoreductase; HET: NAP; 2.50A {Coxiella burnetii}

Probab=96.53  E-value=0.021  Score=47.49  Aligned_cols=87  Identities=11%  Similarity=0.114  Sum_probs=58.9

Q ss_pred             CCCEEEEcCCCChHHHHHHHHHHHcCC---eEEEEeCCcchHHHHHHHHH---------hhCCCcEEEEEccCCCHHHHH
Q 044010           46 SGKVVIITGASSGIGEHLAYEYARRGA---CLALCARREKSLEEVADTAR---------EIGSPDVITIRADVSKVDDCR  113 (248)
Q Consensus        46 ~~k~~lVtGg~~gIG~aia~~l~~~G~---~V~l~~r~~~~~~~~~~~l~---------~~~~~~v~~~~~D~~~~~~~~  113 (248)
                      +.+++.|.|+ |.+|.++++.|++.|+   +|.+.+|++++.++..+++.         .....++.++.+   ..+.+.
T Consensus         2 ~~~~I~iIG~-G~mG~aia~~l~~~g~~~~~V~v~dr~~~~~~~l~~~~gi~~~~~~~~~~~~aDvVilav---~p~~~~   77 (280)
T 3tri_A            2 NTSNITFIGG-GNMARNIVVGLIANGYDPNRICVTNRSLDKLDFFKEKCGVHTTQDNRQGALNADVVVLAV---KPHQIK   77 (280)
T ss_dssp             CCSCEEEESC-SHHHHHHHHHHHHTTCCGGGEEEECSSSHHHHHHHHTTCCEEESCHHHHHSSCSEEEECS---CGGGHH
T ss_pred             CCCEEEEEcc-cHHHHHHHHHHHHCCCCCCeEEEEeCCHHHHHHHHHHcCCEEeCChHHHHhcCCeEEEEe---CHHHHH
Confidence            3456777776 8999999999999998   89999999987776654310         111224444444   346677


Q ss_pred             HHHHHHHhH-cCCccEEEEccccC
Q 044010          114 SLVEETMNH-FGRLDHLVNNAGIS  136 (248)
Q Consensus       114 ~~~~~~~~~-~g~id~vv~~ag~~  136 (248)
                      ++++++... ..+=.++|++++..
T Consensus        78 ~vl~~l~~~~l~~~~iiiS~~agi  101 (280)
T 3tri_A           78 MVCEELKDILSETKILVISLAVGV  101 (280)
T ss_dssp             HHHHHHHHHHHTTTCEEEECCTTC
T ss_pred             HHHHHHHhhccCCCeEEEEecCCC
Confidence            888887665 43333777776543

>1kol_A Formaldehyde dehydrogenase; oxidoreductase; HET: NAD; 1.65A {Pseudomonas putida} SCOP: b.35.1.2 c.2.1.1

Probab=96.53  E-value=0.0066  Score=53.06  Aligned_cols=80  Identities=20%  Similarity=0.211  Sum_probs=52.5

Q ss_pred             CCCEEEEcCCCChHHHHHHHHHHHcCC-eEEEEeCCcchHHHHHHHHHhhCCCcEEEEEccCCCHHHHHHHHHHHHhHcC
Q 044010           46 SGKVVIITGASSGIGEHLAYEYARRGA-CLALCARREKSLEEVADTAREIGSPDVITIRADVSKVDDCRSLVEETMNHFG  124 (248)
Q Consensus        46 ~~k~~lVtGg~~gIG~aia~~l~~~G~-~V~l~~r~~~~~~~~~~~l~~~~~~~v~~~~~D~~~~~~~~~~~~~~~~~~g  124 (248)
                      .|++++|.|+ |++|...++.+...|+ +|+.+++++++.+.+    ++.+-   .  .+|.++.+.+.+.+.++.. ..
T Consensus       185 ~g~~VlV~Ga-G~vG~~aiqlAk~~Ga~~Vi~~~~~~~~~~~a----~~lGa---~--~i~~~~~~~~~~~v~~~t~-g~  253 (398)
T 1kol_A          185 PGSTVYVAGA-GPVGLAAAASARLLGAAVVIVGDLNPARLAHA----KAQGF---E--IADLSLDTPLHEQIAALLG-EP  253 (398)
T ss_dssp             TTCEEEEECC-SHHHHHHHHHHHHTTCSEEEEEESCHHHHHHH----HHTTC---E--EEETTSSSCHHHHHHHHHS-SS
T ss_pred             CCCEEEEECC-cHHHHHHHHHHHHCCCCeEEEEcCCHHHHHHH----HHcCC---c--EEccCCcchHHHHHHHHhC-CC
Confidence            6889999995 9999998887777899 788888887665443    33332   2  2455544333333322211 12


Q ss_pred             CccEEEEccccC
Q 044010          125 RLDHLVNNAGIS  136 (248)
Q Consensus       125 ~id~vv~~ag~~  136 (248)
                      .+|++|.++|..
T Consensus       254 g~Dvvid~~G~~  265 (398)
T 1kol_A          254 EVDCAVDAVGFE  265 (398)
T ss_dssp             CEEEEEECCCTT
T ss_pred             CCCEEEECCCCc
Confidence            699999999864

>1pzg_A LDH, lactate dehydrogenase; apicomplexa, APAD, tetramer, rossmann fold, oxidoreductase; HET: CME A3D; 1.60A {Toxoplasma gondii} SCOP: c.2.1.5 d.162.1.1 PDB: 1pzf_A* 1pze_A* 1pzh_A* 3om9_A* 1sov_A 1sow_A* 3czm_A*

Probab=96.51  E-value=0.071  Score=45.50  Aligned_cols=77  Identities=19%  Similarity=0.191  Sum_probs=52.9

Q ss_pred             CCCEEEEcCCCChHHHHHHHHHHHcCC-eEEEEeCCcchHHHHHHHHHhh----C-CCcEEEEEccCCCHHHHHHHHHHH
Q 044010           46 SGKVVIITGASSGIGEHLAYEYARRGA-CLALCARREKSLEEVADTAREI----G-SPDVITIRADVSKVDDCRSLVEET  119 (248)
Q Consensus        46 ~~k~~lVtGg~~gIG~aia~~l~~~G~-~V~l~~r~~~~~~~~~~~l~~~----~-~~~v~~~~~D~~~~~~~~~~~~~~  119 (248)
                      +..++.|.|+ |.+|.+++..|+..|. +|.+.++++++++.....+...    . ..++.. .   +|   .++.+   
T Consensus         8 ~~~kI~VIGa-G~vG~~lA~~la~~g~~~V~L~D~~~~~~~~~~~~l~~~~~~~~~~~~i~~-t---~d---~~ea~---   76 (331)
T 1pzg_A            8 RRKKVAMIGS-GMIGGTMGYLCALRELADVVLYDVVKGMPEGKALDLSHVTSVVDTNVSVRA-E---YS---YEAAL---   76 (331)
T ss_dssp             CCCEEEEECC-SHHHHHHHHHHHHHTCCEEEEECSSSSHHHHHHHHHHHHHHHTTCCCCEEE-E---CS---HHHHH---
T ss_pred             CCCEEEEECC-CHHHHHHHHHHHhCCCCeEEEEECChhHHHHHHHHHHhhhhccCCCCEEEE-e---CC---HHHHh---
Confidence            3457889998 9999999999999998 9999999998777644433321    1 112221 1   22   22222   


Q ss_pred             HhHcCCccEEEEccccCC
Q 044010          120 MNHFGRLDHLVNNAGISS  137 (248)
Q Consensus       120 ~~~~g~id~vv~~ag~~~  137 (248)
                          .+-|++|..+|...
T Consensus        77 ----~~aDiVi~a~g~p~   90 (331)
T 1pzg_A           77 ----TGADCVIVTAGLTK   90 (331)
T ss_dssp             ----TTCSEEEECCSCSS
T ss_pred             ----CCCCEEEEccCCCC
Confidence                37899999998654

>3ldh_A Lactate dehydrogenase; oxidoreductase, CHOH donor, NAD acceptor; HET: NAD; 3.00A {Squalus acanthias} SCOP: i.12.1.1

Probab=96.51  E-value=0.041  Score=47.02  Aligned_cols=116  Identities=16%  Similarity=0.022  Sum_probs=71.8

Q ss_pred             CCCEEEEcCCCChHHHHHHHHHHHcCC--eEEEEeCCcchHHHHHHHHHhhC---CCcEEEEEccCCCHHHHHHHHHHHH
Q 044010           46 SGKVVIITGASSGIGEHLAYEYARRGA--CLALCARREKSLEEVADTAREIG---SPDVITIRADVSKVDDCRSLVEETM  120 (248)
Q Consensus        46 ~~k~~lVtGg~~gIG~aia~~l~~~G~--~V~l~~r~~~~~~~~~~~l~~~~---~~~v~~~~~D~~~~~~~~~~~~~~~  120 (248)
                      ..+++.|+|+ |.+|.+++..|+..|.  +|++.++++++.+.....+....   ...-.....|..+            
T Consensus        20 ~~~kV~ViGa-G~vG~~~a~~la~~g~~~ev~L~Di~~~~~~g~a~DL~~~~~~~~~~~i~~t~d~~~------------   86 (330)
T 3ldh_A           20 SYNKITVVGC-DAVGMADAISVLMKDLADEVALVDVMEDKLKGEMMDLEHGSLFLHTAKIVSGKDYSV------------   86 (330)
T ss_dssp             CCCEEEEEST-THHHHHHHHHHHHHCCCSEEEEECSCHHHHHHHHHHHHHHGGGSCCSEEEEESSSCS------------
T ss_pred             CCCEEEEECC-CHHHHHHHHHHHhCCCCCeEEEEECCHHHHHHHHHHhhhhhhcccCCeEEEcCCHHH------------
Confidence            4678899998 9999999999999987  89999999887776655555431   1111122233322            


Q ss_pred             hHcCCccEEEEccccCCcccccccCChHHHHHHHHhhhHHHHHHHHHHhhhhhhcCCeEEEEcCc
Q 044010          121 NHFGRLDHLVNNAGISSVALFEDIVNITDFKQIMNINFWGSVYTTRFAVPHLRYTKGKIVVLSSA  185 (248)
Q Consensus       121 ~~~g~id~vv~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~g~iV~isS~  185 (248)
                        +.+.|++|.+||...... .   +.   .+.+..|..-.-.+.+.+.+.  ...+.++++|.-
T Consensus        87 --~~daDiVIitaG~p~kpG-~---tR---~dll~~N~~I~k~i~~~I~k~--~P~a~ilvvtNP  140 (330)
T 3ldh_A           87 --SAGSKLVVITAGARQQEG-E---SR---LNLVQRNVNIFKFIIPNIVKH--SPDCLKELHPEL  140 (330)
T ss_dssp             --CSSCSEEEECCSCCCCSS-C---CT---TGGGHHHHHHHHHHHHHHHHH--CTTCEEEECSSS
T ss_pred             --hCCCCEEEEeCCCCCCCC-C---CH---HHHHHhhHHHHHHHHHHHHhh--CCCceEEeCCCc
Confidence              347999999999753221 1   11   123344444444444444433  134677777753

>1oju_A MDH, malate dehydrogenase; hyperthermophilic, oxidoreductase; HET: ENA; 2.79A {Archaeoglobus fulgidus} PDB: 1ojs_A* 2x0i_A* 2x0j_A*

Probab=96.50  E-value=0.038  Score=46.43  Aligned_cols=113  Identities=14%  Similarity=0.053  Sum_probs=67.9

Q ss_pred             EEEEcCCCChHHHHHHHHHHHcCC--eEEEEeCCcchHHHHHHHHHhh---CCCcEEEEEccCCCHHHHHHHHHHHHhHc
Q 044010           49 VVIITGASSGIGEHLAYEYARRGA--CLALCARREKSLEEVADTAREI---GSPDVITIRADVSKVDDCRSLVEETMNHF  123 (248)
Q Consensus        49 ~~lVtGg~~gIG~aia~~l~~~G~--~V~l~~r~~~~~~~~~~~l~~~---~~~~v~~~~~D~~~~~~~~~~~~~~~~~~  123 (248)
                      ++.|+|+ |.+|.+++..|+..|.  +|++.++++++++.....+.+.   ......+...  +|.+           .+
T Consensus         2 kI~ViGa-G~vG~~la~~l~~~~~~~~v~L~D~~~~~~~g~~~dl~~~~~~~~~~~~i~~t--~d~~-----------a~   67 (294)
T 1oju_A            2 KLGFVGA-GRVGSTSAFTCLLNLDVDEIALVDIAEDLAVGEAMDLAHAAAGIDKYPKIVGG--ADYS-----------LL   67 (294)
T ss_dssp             EEEEECC-SHHHHHHHHHHHHHSCCSEEEEECSSHHHHHHHHHHHHHHHHTTTCCCEEEEE--SCGG-----------GG
T ss_pred             EEEEECC-CHHHHHHHHHHHhCCCCCeEEEEECChHHHHHHHHHHHhhhhhcCCCCEEEEe--CCHH-----------Hh
Confidence            4778898 9999999999999987  8999999988766333333321   1112222211  1222           23


Q ss_pred             CCccEEEEccccCCcccccccCChHHHHHHHHhhhHHHHHHHHHHhhhhhhcCCeEEEEcC
Q 044010          124 GRLDHLVNNAGISSVALFEDIVNITDFKQIMNINFWGSVYTTRFAVPHLRYTKGKIVVLSS  184 (248)
Q Consensus       124 g~id~vv~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~g~iV~isS  184 (248)
                      .+-|++|.++|.....   . .+.   .+.+..|..-.-.+.+.+.+.  ...+.++++|.
T Consensus        68 ~~aDiVViaag~~~kp---G-~~R---~dl~~~N~~i~~~i~~~i~~~--~p~a~iivvsN  119 (294)
T 1oju_A           68 KGSEIIVVTAGLARKP---G-MTR---LDLAHKNAGIIKDIAKKIVEN--APESKILVVTN  119 (294)
T ss_dssp             TTCSEEEECCCCCCCS---S-CCH---HHHHHHHHHHHHHHHHHHHTT--STTCEEEECSS
T ss_pred             CCCCEEEECCCCCCCC---C-CcH---HHHHHHHHHHHHHHHHHHHhh--CCCeEEEEeCC
Confidence            4799999999975321   1 122   234555655544455554433  12467777764

>3l9w_A Glutathione-regulated potassium-efflux system Pro linker, ancillary protein KEFF; potassium channel regulation, domains, antiport; HET: FMN AMP GSH; 1.75A {Escherichia coli} PDB: 3eyw_A* 3l9x_A*

Probab=96.49  E-value=0.0053  Score=54.24  Aligned_cols=73  Identities=16%  Similarity=0.223  Sum_probs=51.3

Q ss_pred             CEEEEcCCCChHHHHHHHHHHHcCCeEEEEeCCcchHHHHHHHHHhhCCCcEEEEEccCCCHHHHHHHHHHHHhHcCCcc
Q 044010           48 KVVIITGASSGIGEHLAYEYARRGACLALCARREKSLEEVADTAREIGSPDVITIRADVSKVDDCRSLVEETMNHFGRLD  127 (248)
Q Consensus        48 k~~lVtGg~~gIG~aia~~l~~~G~~V~l~~r~~~~~~~~~~~l~~~~~~~v~~~~~D~~~~~~~~~~~~~~~~~~g~id  127 (248)
                      ..++|.|. |-+|+.+++.|.++|++|++++++++..+...    +.   .+.++..|.++.+.++++      ...+.|
T Consensus         5 ~~viIiG~-Gr~G~~va~~L~~~g~~vvvId~d~~~v~~~~----~~---g~~vi~GDat~~~~L~~a------gi~~A~   70 (413)
T 3l9w_A            5 MRVIIAGF-GRFGQITGRLLLSSGVKMVVLDHDPDHIETLR----KF---GMKVFYGDATRMDLLESA------GAAKAE   70 (413)
T ss_dssp             CSEEEECC-SHHHHHHHHHHHHTTCCEEEEECCHHHHHHHH----HT---TCCCEESCTTCHHHHHHT------TTTTCS
T ss_pred             CeEEEECC-CHHHHHHHHHHHHCCCCEEEEECCHHHHHHHH----hC---CCeEEEcCCCCHHHHHhc------CCCccC
Confidence            46888886 88999999999999999999999987655443    22   234567777777655443      112456


Q ss_pred             EEEEccc
Q 044010          128 HLVNNAG  134 (248)
Q Consensus       128 ~vv~~ag  134 (248)
                      .+|.+.+
T Consensus        71 ~viv~~~   77 (413)
T 3l9w_A           71 VLINAID   77 (413)
T ss_dssp             EEEECCS
T ss_pred             EEEECCC
Confidence            6665543

>4dio_A NAD(P) transhydrogenase subunit alpha PART 1; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; 2.60A {Sinorhizobium meliloti}

Probab=96.46  E-value=0.027  Score=49.50  Aligned_cols=44  Identities=25%  Similarity=0.277  Sum_probs=38.3

Q ss_pred             CCCCCEEEEcCCCChHHHHHHHHHHHcCCeEEEEeCCcchHHHHH
Q 044010           44 DVSGKVVIITGASSGIGEHLAYEYARRGACLALCARREKSLEEVA   88 (248)
Q Consensus        44 ~~~~k~~lVtGg~~gIG~aia~~l~~~G~~V~l~~r~~~~~~~~~   88 (248)
                      .+.+.+++|.|+ |.+|..+++.+...|++|++.+++..+.+...
T Consensus       187 ~v~~~kV~ViG~-G~iG~~aa~~a~~lGa~V~v~D~~~~~l~~~~  230 (405)
T 4dio_A          187 TVPAAKIFVMGA-GVAGLQAIATARRLGAVVSATDVRPAAKEQVA  230 (405)
T ss_dssp             EECCCEEEEECC-SHHHHHHHHHHHHTTCEEEEECSSTTHHHHHH
T ss_pred             CcCCCEEEEECC-cHHHHHHHHHHHHCCCEEEEEcCCHHHHHHHH
Confidence            457889999998 79999999999999999999999988766543

>1leh_A Leucine dehydrogenase; oxidoreductase; 2.20A {Lysinibacillus sphaericus} SCOP: c.2.1.7 c.58.1.1

Probab=96.45  E-value=0.0054  Score=53.25  Aligned_cols=48  Identities=15%  Similarity=0.290  Sum_probs=41.5

Q ss_pred             cCCCCCEEEEcCCCChHHHHHHHHHHHcCCeEEEEeCCcchHHHHHHHH
Q 044010           43 EDVSGKVVIITGASSGIGEHLAYEYARRGACLALCARREKSLEEVADTA   91 (248)
Q Consensus        43 ~~~~~k~~lVtGg~~gIG~aia~~l~~~G~~V~l~~r~~~~~~~~~~~l   91 (248)
                      .+++||+++|.|. |.+|..+|+.|.+.|++|++.+++.+++++..+++
T Consensus       169 ~~L~GktV~V~G~-G~VG~~~A~~L~~~GakVvv~D~~~~~l~~~a~~~  216 (364)
T 1leh_A          169 DSLEGLAVSVQGL-GNVAKALCKKLNTEGAKLVVTDVNKAAVSAAVAEE  216 (364)
T ss_dssp             CCCTTCEEEEECC-SHHHHHHHHHHHHTTCEEEEECSCHHHHHHHHHHH
T ss_pred             cCCCcCEEEEECc-hHHHHHHHHHHHHCCCEEEEEcCCHHHHHHHHHHc
Confidence            3799999999987 88999999999999999999999887766655543

>1ez4_A Lactate dehydrogenase; rossmann fold, oxidoreductase; HET: NAD; 2.30A {Lactobacillus pentosus} SCOP: c.2.1.5 d.162.1.1

Probab=96.44  E-value=0.04  Score=46.82  Aligned_cols=115  Identities=14%  Similarity=0.126  Sum_probs=69.6

Q ss_pred             CEEEEcCCCChHHHHHHHHHHHcCC--eEEEEeCCcchHHHHHHHHHhhC--CCcEEEEEccCCCHHHHHHHHHHHHhHc
Q 044010           48 KVVIITGASSGIGEHLAYEYARRGA--CLALCARREKSLEEVADTAREIG--SPDVITIRADVSKVDDCRSLVEETMNHF  123 (248)
Q Consensus        48 k~~lVtGg~~gIG~aia~~l~~~G~--~V~l~~r~~~~~~~~~~~l~~~~--~~~v~~~~~D~~~~~~~~~~~~~~~~~~  123 (248)
                      .++.|+|+ |++|.+++..|+..+.  ++++.++++++++.....+....  ...+.+.. |  +.           +.+
T Consensus         6 ~KI~IiGa-G~vG~~~a~~l~~~~~~~el~L~Di~~~~~~g~~~dl~~~~~~~~~~~v~~-~--~~-----------~a~   70 (318)
T 1ez4_A            6 QKVVLVGD-GAVGSSYAFAMAQQGIAEEFVIVDVVKDRTKGDALDLEDAQAFTAPKKIYS-G--EY-----------SDC   70 (318)
T ss_dssp             CEEEEECC-SHHHHHHHHHHHHHTCCSEEEEECSSHHHHHHHHHHHHGGGGGSCCCEEEE-C--CG-----------GGG
T ss_pred             CEEEEECC-CHHHHHHHHHHHcCCCCCEEEEEeCCchHHHHHHHHHHHHHHhcCCeEEEE-C--CH-----------HHh
Confidence            57899998 9999999999998876  89999999888776666665432  11233332 2  22           234


Q ss_pred             CCccEEEEccccCCcccccccCChHHHHHHHHhhhHHHHHHHHHHhhhhhhcCCeEEEEcCcc
Q 044010          124 GRLDHLVNNAGISSVALFEDIVNITDFKQIMNINFWGSVYTTRFAVPHLRYTKGKIVVLSSAA  186 (248)
Q Consensus       124 g~id~vv~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~g~iV~isS~~  186 (248)
                      .+-|++|..+|......       +.-.+.+..|..-...+.+.+..+  ...+.++++|--.
T Consensus        71 ~~aDvVii~ag~~~~~g-------~~R~dl~~~n~~i~~~i~~~i~~~--~p~a~iiv~tNPv  124 (318)
T 1ez4_A           71 KDADLVVITAGAPQKPG-------ESRLDLVNKNLNILSSIVKPVVDS--GFDGIFLVAANPV  124 (318)
T ss_dssp             TTCSEEEECCCC-----------------CHHHHHHHHHHHHHHHHHT--TCCSEEEECSSSH
T ss_pred             CCCCEEEECCCCCCCCC-------CCHHHHHHHHHHHHHHHHHHHHHh--CCCeEEEEeCCcH
Confidence            58999999998753211       111233445555444444444433  1347788775433

>2zqz_A L-LDH, L-lactate dehydrogenase; oxidoreductase, rossmann fold, cytoplasm, glycolysis, NAD, phosphoprotein; 2.50A {Lactobacillus casei} PDB: 2zqy_A 3vkv_A* 1llc_A*

Probab=96.37  E-value=0.048  Score=46.51  Aligned_cols=118  Identities=14%  Similarity=0.086  Sum_probs=73.0

Q ss_pred             CCCCEEEEcCCCChHHHHHHHHHHHcCC--eEEEEeCCcchHHHHHHHHHhhC--CCcEEEEEccCCCHHHHHHHHHHHH
Q 044010           45 VSGKVVIITGASSGIGEHLAYEYARRGA--CLALCARREKSLEEVADTAREIG--SPDVITIRADVSKVDDCRSLVEETM  120 (248)
Q Consensus        45 ~~~k~~lVtGg~~gIG~aia~~l~~~G~--~V~l~~r~~~~~~~~~~~l~~~~--~~~v~~~~~D~~~~~~~~~~~~~~~  120 (248)
                      -+..++.|+|+ |++|.+++..|+..+.  ++++.++++++++.....+....  ...+.+.. |  +.           
T Consensus         7 ~~~~KI~IiGa-G~vG~~la~~l~~~~~~~el~L~Di~~~~~~g~~~dl~~~~~~~~~~~i~~-~--~~-----------   71 (326)
T 2zqz_A            7 KDHQKVILVGD-GAVGSSYAYAMVLQGIAQEIGIVDIFKDKTKGDAIDLSNALPFTSPKKIYS-A--EY-----------   71 (326)
T ss_dssp             CCCCEEEEECC-SHHHHHHHHHHHHHTCCSEEEEECSCHHHHHHHHHHHHTTGGGSCCCEEEE-C--CG-----------
T ss_pred             CCCCEEEEECC-CHHHHHHHHHHHcCCCCCEEEEEeCCchHhHHHHHHHHHHHHhcCCeEEEE-C--CH-----------
Confidence            34568999998 9999999999998875  89999999887776666565431  11233332 2  22           


Q ss_pred             hHcCCccEEEEccccCCcccccccCChHHHHHHHHhhhHHHHHHHHHHhhhhhhcCCeEEEEcCcc
Q 044010          121 NHFGRLDHLVNNAGISSVALFEDIVNITDFKQIMNINFWGSVYTTRFAVPHLRYTKGKIVVLSSAA  186 (248)
Q Consensus       121 ~~~g~id~vv~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~g~iV~isS~~  186 (248)
                      +.+.+-|++|..+|.....   . .+.   ...+..|..-...+.+.+..+  ...+.++++|--.
T Consensus        72 ~a~~~aDvVii~ag~~~k~---g-~~R---~dl~~~n~~i~~~i~~~i~~~--~p~a~iiv~tNPv  128 (326)
T 2zqz_A           72 SDAKDADLVVITAGAPQKP---G-ETR---LDLVNKNLKILKSIVDPIVDS--GFNGIFLVAANPV  128 (326)
T ss_dssp             GGGGGCSEEEECCCCC---------CH---HHHHHHHHHHHHHHHHHHHHH--TCCSEEEECSSSH
T ss_pred             HHhCCCCEEEEcCCCCCCC---C-CCH---HHHHHHHHHHHHHHHHHHHHH--CCCeEEEEeCCcH
Confidence            2234799999999875321   1 122   234555655554555554433  1347888876433

>3hhp_A Malate dehydrogenase; MDH, citric acid cycle, TCA cycle, NAD, oxidoreductase, tricarboxylic acid cycle; 1.45A {Escherichia coli k-12} PDB: 2pwz_A 2cmd_A* 1emd_A* 1ib6_A* 1ie3_A* 4e0b_A*

Probab=96.22  E-value=0.16  Score=42.93  Aligned_cols=114  Identities=18%  Similarity=0.153  Sum_probs=70.5

Q ss_pred             EEEEcCCCChHHHHHHHHHHHc-C--CeEEEEeCCcchHHHHHHHHHhhCCCcEEEEEc-cCCCHHHHHHHHHHHHhHcC
Q 044010           49 VVIITGASSGIGEHLAYEYARR-G--ACLALCARREKSLEEVADTAREIGSPDVITIRA-DVSKVDDCRSLVEETMNHFG  124 (248)
Q Consensus        49 ~~lVtGg~~gIG~aia~~l~~~-G--~~V~l~~r~~~~~~~~~~~l~~~~~~~v~~~~~-D~~~~~~~~~~~~~~~~~~g  124 (248)
                      ++.|+|++|.+|.+++..|+.+ +  .++++.++++ +.+.....+.... ........ .-.+.           +.+.
T Consensus         2 KV~IiGAaG~VG~~~a~~L~~~~~~~~el~L~Di~~-~~~G~a~Dl~~~~-~~~~v~~~~~~~~~-----------~~~~   68 (312)
T 3hhp_A            2 KVAVLGAAGGIGQALALLLKTQLPSGSELSLYDIAP-VTPGVAVDLSHIP-TAVKIKGFSGEDAT-----------PALE   68 (312)
T ss_dssp             EEEEETTTSHHHHHHHHHHHHHSCTTEEEEEECSST-THHHHHHHHHTSC-SSEEEEEECSSCCH-----------HHHT
T ss_pred             EEEEECCCCHHHHHHHHHHHhCCCCCceEEEEecCC-CchhHHHHhhCCC-CCceEEEecCCCcH-----------HHhC
Confidence            5788999999999999999876 5  4899999987 4444444455432 12222211 10122           2234


Q ss_pred             CccEEEEccccCCcccccccCChHHHHHHHHhhhHHHHHHHHHHhhhhhhcCCeEEEEcC
Q 044010          125 RLDHLVNNAGISSVALFEDIVNITDFKQIMNINFWGSVYTTRFAVPHLRYTKGKIVVLSS  184 (248)
Q Consensus       125 ~id~vv~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~g~iV~isS  184 (248)
                      +.|++|..||.....   . .+   -.+.++.|..-...+.+.+.++-  .++.++++|.
T Consensus        69 ~aDivii~ag~~rkp---G-~~---R~dll~~N~~I~~~i~~~i~~~~--p~a~vlvvtN  119 (312)
T 3hhp_A           69 GADVVLISAGVARKP---G-MD---RSDLFNVNAGIVKNLVQQVAKTC--PKACIGIITN  119 (312)
T ss_dssp             TCSEEEECCSCSCCT---T-CC---HHHHHHHHHHHHHHHHHHHHHHC--TTSEEEECSS
T ss_pred             CCCEEEEeCCCCCCC---C-CC---HHHHHHHHHHHHHHHHHHHHHHC--CCcEEEEecC
Confidence            899999999975321   1 12   34556667766666666655441  3467777764

>2v6b_A L-LDH, L-lactate dehydrogenase; oxidoreductase, radioresistance, NAD, cytoplasm, mesophilic, glycolysis; 2.50A {Deinococcus radiodurans}

Probab=96.18  E-value=0.043  Score=46.24  Aligned_cols=112  Identities=14%  Similarity=0.093  Sum_probs=63.2

Q ss_pred             EEEEcCCCChHHHHHHHHHHHcCC--eEEEEeCCcchHHHHHHHHHhhCC--CcEEEEEccCCCHHHHHHHHHHHHhHcC
Q 044010           49 VVIITGASSGIGEHLAYEYARRGA--CLALCARREKSLEEVADTAREIGS--PDVITIRADVSKVDDCRSLVEETMNHFG  124 (248)
Q Consensus        49 ~~lVtGg~~gIG~aia~~l~~~G~--~V~l~~r~~~~~~~~~~~l~~~~~--~~v~~~~~D~~~~~~~~~~~~~~~~~~g  124 (248)
                      ++.|+|+ |.+|..++..|+..|.  +|++.++++++++.....+.....  ....+..   ++.           +.+.
T Consensus         2 kI~VIGa-G~vG~~la~~la~~g~~~eV~L~D~~~~~~~~~~~~l~~~~~~~~~~~i~~---~~~-----------~a~~   66 (304)
T 2v6b_A            2 KVGVVGT-GFVGSTAAFALVLRGSCSELVLVDRDEDRAQAEAEDIAHAAPVSHGTRVWH---GGH-----------SELA   66 (304)
T ss_dssp             EEEEECC-SHHHHHHHHHHHHTTCCSEEEEECSSHHHHHHHHHHHTTSCCTTSCCEEEE---ECG-----------GGGT
T ss_pred             EEEEECC-CHHHHHHHHHHHhCCCCCEEEEEeCCHHHHHHHHHhhhhhhhhcCCeEEEE---CCH-----------HHhC
Confidence            5788888 9999999999999998  999999998766654444432210  1122221   122           1234


Q ss_pred             CccEEEEccccCCcccccccCChHHHHHHHHhhhHHHHHHHHHHhhhhhhcCCeEEEEcC
Q 044010          125 RLDHLVNNAGISSVALFEDIVNITDFKQIMNINFWGSVYTTRFAVPHLRYTKGKIVVLSS  184 (248)
Q Consensus       125 ~id~vv~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~g~iV~isS  184 (248)
                      +.|++|.++|......       +.-.+.+..|+.-.-.+.+.+.++ . ..+.++++|.
T Consensus        67 ~aDvVIi~~~~~~~~g-------~~r~dl~~~n~~i~~~i~~~i~~~-~-p~~~vi~~tN  117 (304)
T 2v6b_A           67 DAQVVILTAGANQKPG-------ESRLDLLEKNADIFRELVPQITRA-A-PDAVLLVTSN  117 (304)
T ss_dssp             TCSEEEECC-------------------CHHHHHHHHHHHHHHHHHH-C-SSSEEEECSS
T ss_pred             CCCEEEEcCCCCCCCC-------CcHHHHHHhHHHHHHHHHHHHHHh-C-CCeEEEEecC
Confidence            7999999998643211       112234455555555555555544 1 3456666543

>3dfz_A SIRC, precorrin-2 dehydrogenase; NAD dehydrogenase, cobalamin biosynthesis, NAD, oxidoreducta porphyrin biosynthesis; 2.30A {Bacillus megaterium}

Probab=96.15  E-value=0.019  Score=46.27  Aligned_cols=39  Identities=21%  Similarity=0.402  Sum_probs=35.0

Q ss_pred             cCCCCCEEEEcCCCChHHHHHHHHHHHcCCeEEEEeCCcc
Q 044010           43 EDVSGKVVIITGASSGIGEHLAYEYARRGACLALCARREK   82 (248)
Q Consensus        43 ~~~~~k~~lVtGg~~gIG~aia~~l~~~G~~V~l~~r~~~   82 (248)
                      .+++||.+||.|| |.+|...++.|++.|++|.+++.+..
T Consensus        27 l~L~gk~VLVVGg-G~va~~ka~~Ll~~GA~VtVvap~~~   65 (223)
T 3dfz_A           27 LDLKGRSVLVVGG-GTIATRRIKGFLQEGAAITVVAPTVS   65 (223)
T ss_dssp             ECCTTCCEEEECC-SHHHHHHHHHHGGGCCCEEEECSSCC
T ss_pred             EEcCCCEEEEECC-CHHHHHHHHHHHHCCCEEEEECCCCC
Confidence            4789999999998 68999999999999999999988654

>2x0j_A Malate dehydrogenase; oxidoreductase, hyperthermophilic, tricarboxylic acid cycle; HET: ENA; 2.79A {Archaeoglobus fulgidus dsm 4304} PDB: 2x0i_A*

Probab=96.15  E-value=0.088  Score=44.20  Aligned_cols=113  Identities=14%  Similarity=0.057  Sum_probs=68.4

Q ss_pred             EEEEcCCCChHHHHHHHHHHHcCC--eEEEEeCCcchHHHHHHHHHhhC---CCcEEEEEccCCCHHHHHHHHHHHHhHc
Q 044010           49 VVIITGASSGIGEHLAYEYARRGA--CLALCARREKSLEEVADTAREIG---SPDVITIRADVSKVDDCRSLVEETMNHF  123 (248)
Q Consensus        49 ~~lVtGg~~gIG~aia~~l~~~G~--~V~l~~r~~~~~~~~~~~l~~~~---~~~v~~~~~D~~~~~~~~~~~~~~~~~~  123 (248)
                      ++-|+|+ |++|.++|..|+.+|.  ++++.+.++++.+.....+....   +........  .|.+           .+
T Consensus         2 KV~IiGa-G~VG~~~a~~l~~~~~~~el~L~Di~~~~~~G~a~DL~h~~~~~~~~~~i~~~--~d~~-----------~~   67 (294)
T 2x0j_A            2 KLGFVGA-GRVGSTSAFTCLLNLDVDEIALVDIAEDLAVGEAMDLAHAAAGIDKYPKIVGG--ADYS-----------LL   67 (294)
T ss_dssp             EEEEECC-SHHHHHHHHHHHHHSCCSEEEEECSSHHHHHHHHHHHHHHHGGGTCCCEEEEE--SCGG-----------GG
T ss_pred             EEEEECc-CHHHHHHHHHHHhCCCCCEEEEEeCCCCcchhhhhhhhcccccCCCCCeEecC--CCHH-----------Hh
Confidence            3667784 9999999999998875  89999999876665555555421   112222222  1222           23


Q ss_pred             CCccEEEEccccCCcccccccCChHHHHHHHHhhhHHHHHHHHHHhhhhhhcCCeEEEEcC
Q 044010          124 GRLDHLVNNAGISSVALFEDIVNITDFKQIMNINFWGSVYTTRFAVPHLRYTKGKIVVLSS  184 (248)
Q Consensus       124 g~id~vv~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~g~iV~isS  184 (248)
                      .+-|++|..||......    .+.   ++.++.|..=.-.+.+.+.+.-  .++.++.+|.
T Consensus        68 ~~aDvVvitAG~prkpG----mtR---~dLl~~Na~I~~~i~~~i~~~~--p~aivlvvsN  119 (294)
T 2x0j_A           68 KGSEIIVVTAGLARKPG----MTR---LDLAHKNAGIIKDIAKKIVENA--PESKILVVTN  119 (294)
T ss_dssp             TTCSEEEECCCCCCCSS----SCH---HHHHHHHHHHHHHHHHHHHTTS--TTCEEEECSS
T ss_pred             CCCCEEEEecCCCCCCC----Cch---HHHHHHHHHHHHHHHHHHHhcC--CceEEEEecC
Confidence            47999999999754221    132   3456667665555555554331  2356666554

>1p9l_A Dihydrodipicolinate reductase; oxidoreductase, lysine biosynthesis, NADH binding specificity, TB structural genomics consortium; HET: NAD PDC PG4; 2.30A {Mycobacterium tuberculosis} SCOP: c.2.1.3 d.81.1.3 PDB: 1c3v_A* 1yl5_A 1yl7_A* 1yl6_A*

Probab=96.14  E-value=0.034  Score=45.44  Aligned_cols=77  Identities=16%  Similarity=0.180  Sum_probs=56.4

Q ss_pred             EEEEcCCCChHHHHHHHHHHHc-CCeEEEEeCCcchHHHHHHHHHhhCCCcEEEEEccCCCHHHHHHHHHHHHhHcCCcc
Q 044010           49 VVIITGASSGIGEHLAYEYARR-GACLALCARREKSLEEVADTAREIGSPDVITIRADVSKVDDCRSLVEETMNHFGRLD  127 (248)
Q Consensus        49 ~~lVtGg~~gIG~aia~~l~~~-G~~V~l~~r~~~~~~~~~~~l~~~~~~~v~~~~~D~~~~~~~~~~~~~~~~~~g~id  127 (248)
                      ++.|.|++|.+|+.+++.+.+. |++++.+....+..++..   ....  +   +.+|+++++...+.++.+.+.  +++
T Consensus         2 kV~V~Ga~G~mG~~i~~~~~~~~~~elva~~d~~~dl~~~~---~~~~--D---vvIDfT~p~a~~~~~~~a~~~--g~~   71 (245)
T 1p9l_A            2 RVGVLGAKGKVGTTMVRAVAAADDLTLSAELDAGDPLSLLT---DGNT--E---VVIDFTHPDVVMGNLEFLIDN--GIH   71 (245)
T ss_dssp             EEEEETTTSHHHHHHHHHHHHCTTCEEEEEECTTCCTHHHH---HTTC--C---EEEECSCTTTHHHHHHHHHHT--TCE
T ss_pred             EEEEECCCCHHHHHHHHHHHhCCCCEEEEEEccCCCHHHHh---ccCC--c---EEEEccChHHHHHHHHHHHHc--CCC
Confidence            5889999999999999999876 888775544333333322   2112  2   778999999998888877665  688


Q ss_pred             EEEEcccc
Q 044010          128 HLVNNAGI  135 (248)
Q Consensus       128 ~vv~~ag~  135 (248)
                      +|+-..|.
T Consensus        72 ~VigTTG~   79 (245)
T 1p9l_A           72 AVVGTTGF   79 (245)
T ss_dssp             EEECCCCC
T ss_pred             EEEcCCCC
Confidence            99888774

>2raf_A Putative dinucleotide-binding oxidoreductase; NP_786167.1, NADP oxidoreductase coenzyme F420-dependent, structural genomics; HET: MSE NAP; 1.60A {Lactobacillus plantarum WCFS1}

Probab=96.14  E-value=0.036  Score=43.93  Aligned_cols=77  Identities=9%  Similarity=0.190  Sum_probs=51.3

Q ss_pred             cCCCCCEEEEcCCCChHHHHHHHHHHHcCCeEEEEeCCcchHHHHHHHHHhhCCCcEEEEEccCCCHHHHHHHHHHHHhH
Q 044010           43 EDVSGKVVIITGASSGIGEHLAYEYARRGACLALCARREKSLEEVADTAREIGSPDVITIRADVSKVDDCRSLVEETMNH  122 (248)
Q Consensus        43 ~~~~~k~~lVtGg~~gIG~aia~~l~~~G~~V~l~~r~~~~~~~~~~~l~~~~~~~v~~~~~D~~~~~~~~~~~~~~~~~  122 (248)
                      .++.++++.|.| .|.+|.+++..|++.|++|.+.+|+++          .....++.++.+-   ...++++++++...
T Consensus        15 ~~~~~~~I~iiG-~G~mG~~la~~l~~~g~~V~~~~~~~~----------~~~~aD~vi~av~---~~~~~~v~~~l~~~   80 (209)
T 2raf_A           15 LYFQGMEITIFG-KGNMGQAIGHNFEIAGHEVTYYGSKDQ----------ATTLGEIVIMAVP---YPALAALAKQYATQ   80 (209)
T ss_dssp             -----CEEEEEC-CSHHHHHHHHHHHHTTCEEEEECTTCC----------CSSCCSEEEECSC---HHHHHHHHHHTHHH
T ss_pred             cccCCCEEEEEC-CCHHHHHHHHHHHHCCCEEEEEcCCHH----------HhccCCEEEEcCC---cHHHHHHHHHHHHh
Confidence            356777899998 699999999999999999999999875          1122344444332   56677888877655


Q ss_pred             cCCccEEEEccc
Q 044010          123 FGRLDHLVNNAG  134 (248)
Q Consensus       123 ~g~id~vv~~ag  134 (248)
                      .. =.++++.+.
T Consensus        81 ~~-~~~vi~~~~   91 (209)
T 2raf_A           81 LK-GKIVVDITN   91 (209)
T ss_dssp             HT-TSEEEECCC
T ss_pred             cC-CCEEEEECC
Confidence            44 345665544

>3fpc_A NADP-dependent alcohol dehydrogenase; oxydoreductase, bacterial alcohol dehydrogenase, domain exchange, chimera, metal-binding; 1.40A {Thermoanaerobacter brockii} PDB: 2nvb_A* 1ykf_A* 1bxz_A* 3ftn_A 3fsr_A 1y9a_A* 2oui_A* 3fpl_A* 1jqb_A 1kev_A* 1ped_A 2b83_A

Probab=96.14  E-value=0.0043  Score=53.30  Aligned_cols=77  Identities=21%  Similarity=0.248  Sum_probs=50.5

Q ss_pred             CCCEEEEcCCCChHHHHHHHHHHHcCC-eEEEEeCCcchHHHHHHHHHhhCCCcEEEEEccCCCHHHHHHHHHHHHhHc-
Q 044010           46 SGKVVIITGASSGIGEHLAYEYARRGA-CLALCARREKSLEEVADTAREIGSPDVITIRADVSKVDDCRSLVEETMNHF-  123 (248)
Q Consensus        46 ~~k~~lVtGg~~gIG~aia~~l~~~G~-~V~l~~r~~~~~~~~~~~l~~~~~~~v~~~~~D~~~~~~~~~~~~~~~~~~-  123 (248)
                      .|.+++|+|+ |++|...++.+...|+ +|+.+++++++.+.+    ++.+..    ...|.++.+    +.+++.+.. 
T Consensus       166 ~g~~VlV~Ga-G~vG~~a~qla~~~Ga~~Vi~~~~~~~~~~~~----~~lGa~----~vi~~~~~~----~~~~v~~~t~  232 (352)
T 3fpc_A          166 LGDTVCVIGI-GPVGLMSVAGANHLGAGRIFAVGSRKHCCDIA----LEYGAT----DIINYKNGD----IVEQILKATD  232 (352)
T ss_dssp             TTCCEEEECC-SHHHHHHHHHHHTTTCSSEEEECCCHHHHHHH----HHHTCC----EEECGGGSC----HHHHHHHHTT
T ss_pred             CCCEEEEECC-CHHHHHHHHHHHHcCCcEEEEECCCHHHHHHH----HHhCCc----eEEcCCCcC----HHHHHHHHcC
Confidence            5889999985 9999998887777899 899999887654432    333432    123443332    223333332 


Q ss_pred             C-CccEEEEcccc
Q 044010          124 G-RLDHLVNNAGI  135 (248)
Q Consensus       124 g-~id~vv~~ag~  135 (248)
                      + .+|+++.++|.
T Consensus       233 g~g~D~v~d~~g~  245 (352)
T 3fpc_A          233 GKGVDKVVIAGGD  245 (352)
T ss_dssp             TCCEEEEEECSSC
T ss_pred             CCCCCEEEECCCC
Confidence            2 69999999875

>3goh_A Alcohol dehydrogenase, zinc-containing; NP_718042.1, alcohol dehydrogenase superfamily protein, ALCO dehydrogenase groes-like domain; 1.55A {Shewanella oneidensis}

Probab=96.13  E-value=0.015  Score=49.00  Aligned_cols=68  Identities=13%  Similarity=0.119  Sum_probs=45.8

Q ss_pred             CCCEEEEcCCCChHHHHHHHHHHHcCCeEEEEeCCcchHHHHHHHHHhhCCCcEEEEEccCCCHHHHHHHHHHHHhHcCC
Q 044010           46 SGKVVIITGASSGIGEHLAYEYARRGACLALCARREKSLEEVADTAREIGSPDVITIRADVSKVDDCRSLVEETMNHFGR  125 (248)
Q Consensus        46 ~~k~~lVtGg~~gIG~aia~~l~~~G~~V~l~~r~~~~~~~~~~~l~~~~~~~v~~~~~D~~~~~~~~~~~~~~~~~~g~  125 (248)
                      .|+++||+|+ |++|...++.+...|++|+.++ ++++.+.+. +   .+. . .++  |  |.+.       +   .++
T Consensus       142 ~g~~VlV~Ga-G~vG~~a~qlak~~Ga~Vi~~~-~~~~~~~~~-~---lGa-~-~v~--~--d~~~-------v---~~g  199 (315)
T 3goh_A          142 KQREVLIVGF-GAVNNLLTQMLNNAGYVVDLVS-ASLSQALAA-K---RGV-R-HLY--R--EPSQ-------V---TQK  199 (315)
T ss_dssp             SCCEEEEECC-SHHHHHHHHHHHHHTCEEEEEC-SSCCHHHHH-H---HTE-E-EEE--S--SGGG-------C---CSC
T ss_pred             CCCEEEEECC-CHHHHHHHHHHHHcCCEEEEEE-ChhhHHHHH-H---cCC-C-EEE--c--CHHH-------h---CCC
Confidence            6899999999 9999998887777899999999 776655442 2   232 1 122  3  2111       1   347


Q ss_pred             ccEEEEcccc
Q 044010          126 LDHLVNNAGI  135 (248)
Q Consensus       126 id~vv~~ag~  135 (248)
                      +|+++.++|.
T Consensus       200 ~Dvv~d~~g~  209 (315)
T 3goh_A          200 YFAIFDAVNS  209 (315)
T ss_dssp             EEEEECC---
T ss_pred             ccEEEECCCc
Confidence            9999999874

>1f8f_A Benzyl alcohol dehydrogenase; rossmann fold, oxidoreductase; HET: NAD; 2.20A {Acinetobacter calcoaceticus} SCOP: b.35.1.2 c.2.1.1

Probab=96.09  E-value=0.012  Score=50.94  Aligned_cols=78  Identities=17%  Similarity=0.219  Sum_probs=50.4

Q ss_pred             CCCEEEEcCCCChHHHHHHHHHHHcCC-eEEEEeCCcchHHHHHHHHHhhCCCcEEEEEccCCCHHHHHHHHHHHHhHcC
Q 044010           46 SGKVVIITGASSGIGEHLAYEYARRGA-CLALCARREKSLEEVADTAREIGSPDVITIRADVSKVDDCRSLVEETMNHFG  124 (248)
Q Consensus        46 ~~k~~lVtGg~~gIG~aia~~l~~~G~-~V~l~~r~~~~~~~~~~~l~~~~~~~v~~~~~D~~~~~~~~~~~~~~~~~~g  124 (248)
                      .|+++||+|+ |++|...++.+...|+ +|+.+++++++.+.+    ++.+...    ..|..+.+ +.+.+.+.  ..+
T Consensus       190 ~g~~VlV~Ga-G~vG~~a~qlak~~Ga~~Vi~~~~~~~~~~~a----~~lGa~~----vi~~~~~~-~~~~~~~~--~~g  257 (371)
T 1f8f_A          190 PASSFVTWGA-GAVGLSALLAAKVCGASIIIAVDIVESRLELA----KQLGATH----VINSKTQD-PVAAIKEI--TDG  257 (371)
T ss_dssp             TTCEEEEESC-SHHHHHHHHHHHHHTCSEEEEEESCHHHHHHH----HHHTCSE----EEETTTSC-HHHHHHHH--TTS
T ss_pred             CCCEEEEECC-CHHHHHHHHHHHHcCCCeEEEECCCHHHHHHH----HHcCCCE----EecCCccC-HHHHHHHh--cCC
Confidence            5889999985 9999998887777899 699999887665443    2333221    23444432 22222222  123


Q ss_pred             CccEEEEcccc
Q 044010          125 RLDHLVNNAGI  135 (248)
Q Consensus       125 ~id~vv~~ag~  135 (248)
                      .+|+++.++|.
T Consensus       258 g~D~vid~~g~  268 (371)
T 1f8f_A          258 GVNFALESTGS  268 (371)
T ss_dssp             CEEEEEECSCC
T ss_pred             CCcEEEECCCC
Confidence            79999999873

>2dph_A Formaldehyde dismutase; dismutation of aldehydes, oxidoreductase; HET: NAD; 2.27A {Pseudomonas putida}

Probab=96.06  E-value=0.0092  Score=52.19  Aligned_cols=80  Identities=23%  Similarity=0.317  Sum_probs=52.2

Q ss_pred             CCCEEEEcCCCChHHHHHHHHHHHcCC-eEEEEeCCcchHHHHHHHHHhhCCCcEEEEEccCCCHHHHHHHHHHHHhHcC
Q 044010           46 SGKVVIITGASSGIGEHLAYEYARRGA-CLALCARREKSLEEVADTAREIGSPDVITIRADVSKVDDCRSLVEETMNHFG  124 (248)
Q Consensus        46 ~~k~~lVtGg~~gIG~aia~~l~~~G~-~V~l~~r~~~~~~~~~~~l~~~~~~~v~~~~~D~~~~~~~~~~~~~~~~~~g  124 (248)
                      .|.+++|.|+ |++|...++.+...|+ +|+.+++++++.+.    +++.+.   ..  +|.++.+.+.+.+.++.. ..
T Consensus       185 ~g~~VlV~Ga-G~vG~~aiqlak~~Ga~~Vi~~~~~~~~~~~----a~~lGa---~~--i~~~~~~~~~~~~~~~~~-g~  253 (398)
T 2dph_A          185 PGSHVYIAGA-GPVGRCAAAGARLLGAACVIVGDQNPERLKL----LSDAGF---ET--IDLRNSAPLRDQIDQILG-KP  253 (398)
T ss_dssp             TTCEEEEECC-SHHHHHHHHHHHHHTCSEEEEEESCHHHHHH----HHTTTC---EE--EETTSSSCHHHHHHHHHS-SS
T ss_pred             CCCEEEEECC-CHHHHHHHHHHHHcCCCEEEEEcCCHHHHHH----HHHcCC---cE--EcCCCcchHHHHHHHHhC-CC
Confidence            6889999996 9999998887777899 89999998765543    333332   22  455543221222222211 12


Q ss_pred             CccEEEEccccC
Q 044010          125 RLDHLVNNAGIS  136 (248)
Q Consensus       125 ~id~vv~~ag~~  136 (248)
                      .+|++|.++|..
T Consensus       254 g~Dvvid~~g~~  265 (398)
T 2dph_A          254 EVDCGVDAVGFE  265 (398)
T ss_dssp             CEEEEEECSCTT
T ss_pred             CCCEEEECCCCc
Confidence            699999999854

>1tt7_A YHFP; alcohol dehydrogenase, Zn-dependent, NAD, structural genomics, protein structure initiative, PSI; 2.70A {Bacillus subtilis} SCOP: b.35.1.2 c.2.1.1 PDB: 1y9e_A*

Probab=96.04  E-value=0.0065  Score=51.61  Aligned_cols=39  Identities=21%  Similarity=0.363  Sum_probs=34.4

Q ss_pred             EEEEcCCCChHHHHHHHHHHHcCCeEEEEeCCcchHHHH
Q 044010           49 VVIITGASSGIGEHLAYEYARRGACLALCARREKSLEEV   87 (248)
Q Consensus        49 ~~lVtGg~~gIG~aia~~l~~~G~~V~l~~r~~~~~~~~   87 (248)
                      +++|+|++|++|...++.+...|++|+.+++++++.+.+
T Consensus       153 ~VlV~Ga~G~vG~~~~q~a~~~Ga~vi~~~~~~~~~~~~  191 (330)
T 1tt7_A          153 SVLVTGATGGVGGIAVSMLNKRGYDVVASTGNREAADYL  191 (330)
T ss_dssp             CEEEESTTSHHHHHHHHHHHHHTCCEEEEESSSSTHHHH
T ss_pred             eEEEECCCCHHHHHHHHHHHHCCCEEEEEeCCHHHHHHH
Confidence            799999999999999988888899999999988776544

>3nep_X Malate dehydrogenase; halophIle, molecular adpatation, NAD, oxidoreductase, tricarboxylic acid cycle; 1.55A {Salinibacter ruber}

Probab=96.02  E-value=0.093  Score=44.48  Aligned_cols=113  Identities=17%  Similarity=0.101  Sum_probs=68.5

Q ss_pred             EEEEcCCCChHHHHHHHHHHHcCC--eEEEEeCCcchHHHHHHHHHhhC---CCcEEEEEccCCCHHHHHHHHHHHHhHc
Q 044010           49 VVIITGASSGIGEHLAYEYARRGA--CLALCARREKSLEEVADTAREIG---SPDVITIRADVSKVDDCRSLVEETMNHF  123 (248)
Q Consensus        49 ~~lVtGg~~gIG~aia~~l~~~G~--~V~l~~r~~~~~~~~~~~l~~~~---~~~v~~~~~D~~~~~~~~~~~~~~~~~~  123 (248)
                      ++.|+|+ |.+|.+++..|+.+|.  +|++.++++++++.....+....   .........|  +.           +.+
T Consensus         2 kv~ViGa-G~vG~~~a~~l~~~~~~~el~l~D~~~~k~~g~a~DL~~~~~~~~~~~~v~~~~--~~-----------~a~   67 (314)
T 3nep_X            2 KVTVIGA-GNVGATVAECVARQDVAKEVVMVDIKDGMPQGKALDMRESSPIHGFDTRVTGTN--DY-----------GPT   67 (314)
T ss_dssp             EEEEECC-SHHHHHHHHHHHHHTCSSEEEEECSSTTHHHHHHHHHHHHHHHHTCCCEEEEES--SS-----------GGG
T ss_pred             EEEEECC-CHHHHHHHHHHHhCCCCCEEEEEeCchHHHHHHHHHHhccccccCCCcEEEECC--CH-----------HHh
Confidence            4678886 9999999999999886  89999999987765555554321   1122222122  22           234


Q ss_pred             CCccEEEEccccCCcccccccCChHHHHHHHHhhhHHHHHHHHHHhhhhhhcCCeEEEEcC
Q 044010          124 GRLDHLVNNAGISSVALFEDIVNITDFKQIMNINFWGSVYTTRFAVPHLRYTKGKIVVLSS  184 (248)
Q Consensus       124 g~id~vv~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~g~iV~isS  184 (248)
                      .+-|++|.++|......       +.-.+.+..|..-.-.+.+.+..+  ...+.++++|.
T Consensus        68 ~~aDvVii~ag~~~kpG-------~~R~dl~~~N~~i~~~i~~~i~~~--~p~a~vivvtN  119 (314)
T 3nep_X           68 EDSDVCIITAGLPRSPG-------MSRDDLLAKNTEIVGGVTEQFVEG--SPDSTIIVVAN  119 (314)
T ss_dssp             TTCSEEEECCCC--------------CHHHHHHHHHHHHHHHHHHHTT--CTTCEEEECCS
T ss_pred             CCCCEEEECCCCCCCCC-------CCHHHHHHhhHHHHHHHHHHHHHh--CCCcEEEecCC
Confidence            58999999999753211       122344555665555555554433  12467777775

>3nx4_A Putative oxidoreductase; csgid, structural genomics, center for struc genomics of infectious diseases, PSI, protein structure INI; HET: MSE NAP; 1.90A {Salmonella enterica subsp} PDB: 1o89_A 1o8c_A*

Probab=95.96  E-value=0.013  Score=49.64  Aligned_cols=40  Identities=30%  Similarity=0.440  Sum_probs=35.0

Q ss_pred             CCEEEEcCCCChHHHHHHHHHHHcCCeEEEEeCCcchHHHH
Q 044010           47 GKVVIITGASSGIGEHLAYEYARRGACLALCARREKSLEEV   87 (248)
Q Consensus        47 ~k~~lVtGg~~gIG~aia~~l~~~G~~V~l~~r~~~~~~~~   87 (248)
                      |+ ++|+|++|++|...++.+...|++|+.+++++++.+.+
T Consensus       148 g~-VlV~Ga~G~vG~~aiqla~~~Ga~Vi~~~~~~~~~~~~  187 (324)
T 3nx4_A          148 GE-VVVTGASGGVGSTAVALLHKLGYQVAAVSGRESTHGYL  187 (324)
T ss_dssp             CC-EEESSTTSHHHHHHHHHHHHTTCCEEEEESCGGGHHHH
T ss_pred             Ce-EEEECCCcHHHHHHHHHHHHcCCEEEEEeCCHHHHHHH
Confidence            46 99999999999999888888999999999988776554

>1f0y_A HCDH, L-3-hydroxyacyl-COA dehydrogenase; abortive ternary complex, oxidoreductase; HET: CAA NAD; 1.80A {Homo sapiens} SCOP: a.100.1.3 c.2.1.6 PDB: 3rqs_A 1lsj_A* 1il0_A* 1lso_A* 1m76_A* 1m75_A* 1f14_A 1f12_A 1f17_A* 3had_A* 2hdh_A* 3hdh_A*

Probab=95.96  E-value=0.083  Score=44.17  Aligned_cols=40  Identities=25%  Similarity=0.307  Sum_probs=34.7

Q ss_pred             CEEEEcCCCChHHHHHHHHHHHcCCeEEEEeCCcchHHHHH
Q 044010           48 KVVIITGASSGIGEHLAYEYARRGACLALCARREKSLEEVA   88 (248)
Q Consensus        48 k~~lVtGg~~gIG~aia~~l~~~G~~V~l~~r~~~~~~~~~   88 (248)
                      +++.|.|+ |.+|.++|..|++.|++|++.+|++++.+...
T Consensus        16 ~~I~VIG~-G~mG~~iA~~la~~G~~V~~~d~~~~~~~~~~   55 (302)
T 1f0y_A           16 KHVTVIGG-GLMGAGIAQVAAATGHTVVLVDQTEDILAKSK   55 (302)
T ss_dssp             CEEEEECC-SHHHHHHHHHHHHTTCEEEEECSCHHHHHHHH
T ss_pred             CEEEEECC-CHHHHHHHHHHHhCCCeEEEEECCHHHHHHHH
Confidence            56888877 89999999999999999999999987766543

>2pv7_A T-protein [includes: chorismate mutase (EC 5.4.99 and prephenate dehydrogenase (EC...; 1574749, chorismate mutase type II; HET: MSE TYR NAD; 2.00A {Haemophilus influenzae} SCOP: a.100.1.12 c.2.1.6

Probab=95.95  E-value=0.04  Score=46.19  Aligned_cols=80  Identities=13%  Similarity=0.143  Sum_probs=51.1

Q ss_pred             CCEEEEcCCCChHHHHHHHHHHHcCCeEEEEeCCcchHHHHHHHHHhhCCCcEEEEEccCCCHHHHHHHHHHHHhHcCCc
Q 044010           47 GKVVIITGASSGIGEHLAYEYARRGACLALCARREKSLEEVADTAREIGSPDVITIRADVSKVDDCRSLVEETMNHFGRL  126 (248)
Q Consensus        47 ~k~~lVtGg~~gIG~aia~~l~~~G~~V~l~~r~~~~~~~~~~~l~~~~~~~v~~~~~D~~~~~~~~~~~~~~~~~~g~i  126 (248)
                      .+++.|.||.|.+|.++++.|.+.|++|.+.+|+++.  +..+.+   ...++.++.+-.   ..+.++++++.....+=
T Consensus        21 ~~~I~iIGg~G~mG~~la~~l~~~G~~V~~~~~~~~~--~~~~~~---~~aDvVilavp~---~~~~~vl~~l~~~l~~~   92 (298)
T 2pv7_A           21 IHKIVIVGGYGKLGGLFARYLRASGYPISILDREDWA--VAESIL---ANADVVIVSVPI---NLTLETIERLKPYLTEN   92 (298)
T ss_dssp             CCCEEEETTTSHHHHHHHHHHHTTTCCEEEECTTCGG--GHHHHH---TTCSEEEECSCG---GGHHHHHHHHGGGCCTT
T ss_pred             CCEEEEEcCCCHHHHHHHHHHHhCCCeEEEEECCccc--CHHHHh---cCCCEEEEeCCH---HHHHHHHHHHHhhcCCC
Confidence            4578889989999999999999999999999998653  111112   223555554432   33666777665443322


Q ss_pred             cEEEEccc
Q 044010          127 DHLVNNAG  134 (248)
Q Consensus       127 d~vv~~ag  134 (248)
                      .+++..++
T Consensus        93 ~iv~~~~s  100 (298)
T 2pv7_A           93 MLLADLTS  100 (298)
T ss_dssp             SEEEECCS
T ss_pred             cEEEECCC
Confidence            34554443

>2rir_A Dipicolinate synthase, A chain; structural genomics, APC1343, PSI-2, structure initiative; HET: MSE NAP; 2.79A {Bacillus subtilis}

Probab=95.95  E-value=0.013  Score=49.24  Aligned_cols=74  Identities=22%  Similarity=0.369  Sum_probs=52.7

Q ss_pred             ccCCCCCEEEEcCCCChHHHHHHHHHHHcCCeEEEEeCCcchHHHHHHHHHhhCCCcEEEEEccCCCHHHHHHHHHHHHh
Q 044010           42 SEDVSGKVVIITGASSGIGEHLAYEYARRGACLALCARREKSLEEVADTAREIGSPDVITIRADVSKVDDCRSLVEETMN  121 (248)
Q Consensus        42 ~~~~~~k~~lVtGg~~gIG~aia~~l~~~G~~V~l~~r~~~~~~~~~~~l~~~~~~~v~~~~~D~~~~~~~~~~~~~~~~  121 (248)
                      ..+++|++++|.|+ |++|+++++.+...|++|++.+|+.++.+...    +.+   +..+.     .++++++      
T Consensus       152 ~~~l~g~~v~IiG~-G~iG~~~a~~l~~~G~~V~~~d~~~~~~~~~~----~~g---~~~~~-----~~~l~~~------  212 (300)
T 2rir_A          152 DYTIHGSQVAVLGL-GRTGMTIARTFAALGANVKVGARSSAHLARIT----EMG---LVPFH-----TDELKEH------  212 (300)
T ss_dssp             SSCSTTSEEEEECC-SHHHHHHHHHHHHTTCEEEEEESSHHHHHHHH----HTT---CEEEE-----GGGHHHH------
T ss_pred             CCCCCCCEEEEEcc-cHHHHHHHHHHHHCCCEEEEEECCHHHHHHHH----HCC---CeEEc-----hhhHHHH------
Confidence            35789999999986 99999999999999999999999876543322    222   22221     1233333      


Q ss_pred             HcCCccEEEEcccc
Q 044010          122 HFGRLDHLVNNAGI  135 (248)
Q Consensus       122 ~~g~id~vv~~ag~  135 (248)
                       ..+.|+++++++.
T Consensus       213 -l~~aDvVi~~~p~  225 (300)
T 2rir_A          213 -VKDIDICINTIPS  225 (300)
T ss_dssp             -STTCSEEEECCSS
T ss_pred             -hhCCCEEEECCCh
Confidence             2479999999874

>1edz_A 5,10-methylenetetrahydrofolate dehydrogenase; nucleotide-binding domain, monofunctional, oxidoreductase; 2.80A {Saccharomyces cerevisiae} SCOP: c.2.1.7 c.58.1.2 PDB: 1ee9_A*

Probab=95.92  E-value=0.005  Score=52.43  Aligned_cols=84  Identities=14%  Similarity=0.035  Sum_probs=55.5

Q ss_pred             cCCCCCEEEEcCCCChHHHHHHHHHHHcCCeEEEEeCCcchHHHHHHHHHhhCCCcEEEEEccCCCHHHHHHHHHHHHhH
Q 044010           43 EDVSGKVVIITGASSGIGEHLAYEYARRGACLALCARREKSLEEVADTAREIGSPDVITIRADVSKVDDCRSLVEETMNH  122 (248)
Q Consensus        43 ~~~~~k~~lVtGg~~gIG~aia~~l~~~G~~V~l~~r~~~~~~~~~~~l~~~~~~~v~~~~~D~~~~~~~~~~~~~~~~~  122 (248)
                      .+++||+++|.|++.-+|..+|+.|+..|++|.+++|+..+..+..+++....  . ....+..++.+++++.+.     
T Consensus       173 ~~l~gk~vvVIG~G~iVG~~~A~~L~~~gAtVtv~nR~~~~l~~ra~~la~~~--~-~~t~~~~t~~~~L~e~l~-----  244 (320)
T 1edz_A          173 NRLYGKKCIVINRSEIVGRPLAALLANDGATVYSVDVNNIQKFTRGESLKLNK--H-HVEDLGEYSEDLLKKCSL-----  244 (320)
T ss_dssp             CTTTTCEEEEECCCTTTHHHHHHHHHTTSCEEEEECSSEEEEEESCCCSSCCC--C-EEEEEEECCHHHHHHHHH-----
T ss_pred             CCCCCCEEEEECCCcchHHHHHHHHHHCCCEEEEEeCchHHHHhHHHHHhhhc--c-cccccccccHhHHHHHhc-----
Confidence            37999999999998888999999999999999999987432221111111100  1 111111233455665555     


Q ss_pred             cCCccEEEEccccC
Q 044010          123 FGRLDHLVNNAGIS  136 (248)
Q Consensus       123 ~g~id~vv~~ag~~  136 (248)
                        +-|++|.++|..
T Consensus       245 --~ADIVIsAtg~p  256 (320)
T 1edz_A          245 --DSDVVITGVPSE  256 (320)
T ss_dssp             --HCSEEEECCCCT
T ss_pred             --cCCEEEECCCCC
Confidence              589999998864

>3gg9_A D-3-phosphoglycerate dehydrogenase oxidoreductase; structural genomics, PSI-2, P structure initiative; 1.90A {Ralstonia solanacearum}

Probab=95.91  E-value=0.11  Score=44.70  Aligned_cols=38  Identities=21%  Similarity=0.193  Sum_probs=34.4

Q ss_pred             cCCCCCEEEEcCCCChHHHHHHHHHHHcCCeEEEEeCCc
Q 044010           43 EDVSGKVVIITGASSGIGEHLAYEYARRGACLALCARRE   81 (248)
Q Consensus        43 ~~~~~k~~lVtGg~~gIG~aia~~l~~~G~~V~l~~r~~   81 (248)
                      .++.||++.|.|- |.||.++|+++...|++|+..+|+.
T Consensus       156 ~~l~g~tvGIIGl-G~IG~~vA~~l~~~G~~V~~~d~~~  193 (352)
T 3gg9_A          156 RVLKGQTLGIFGY-GKIGQLVAGYGRAFGMNVLVWGREN  193 (352)
T ss_dssp             CCCTTCEEEEECC-SHHHHHHHHHHHHTTCEEEEECSHH
T ss_pred             ccCCCCEEEEEeE-CHHHHHHHHHHHhCCCEEEEECCCC
Confidence            4789999999976 8999999999999999999998864

>4gx0_A TRKA domain protein; membrane protein, ION channel, ADP binding, NAD binding, MEM transport protein; HET: MAL GLC; 2.60A {Geobacter sulfurreducens} PDB: 4gx1_A* 4gx2_A* 4gx5_A 4gvl_A*

Probab=95.91  E-value=0.023  Score=52.01  Aligned_cols=62  Identities=10%  Similarity=0.097  Sum_probs=46.5

Q ss_pred             CCEEEEcCCCChHHHHHHHHHHHcCCeEEEEeCCcchHHHHHHHHHhhCCCcEEEEEccCCCHHHHHHH
Q 044010           47 GKVVIITGASSGIGEHLAYEYARRGACLALCARREKSLEEVADTAREIGSPDVITIRADVSKVDDCRSL  115 (248)
Q Consensus        47 ~k~~lVtGg~~gIG~aia~~l~~~G~~V~l~~r~~~~~~~~~~~l~~~~~~~v~~~~~D~~~~~~~~~~  115 (248)
                      .++++|.|. |-.|..+++.|.++|.+|++++.+++..+...+    ..  .+.++..|.++++.++++
T Consensus       127 ~~hviI~G~-g~~g~~la~~L~~~~~~vvvid~~~~~~~~~~~----~~--~~~~i~Gd~~~~~~L~~a  188 (565)
T 4gx0_A          127 RGHILIFGI-DPITRTLIRKLESRNHLFVVVTDNYDQALHLEE----QE--GFKVVYGSPTDAHVLAGL  188 (565)
T ss_dssp             CSCEEEESC-CHHHHHHHHHTTTTTCCEEEEESCHHHHHHHHH----SC--SSEEEESCTTCHHHHHHT
T ss_pred             CCeEEEECC-ChHHHHHHHHHHHCCCCEEEEECCHHHHHHHHH----hc--CCeEEEeCCCCHHHHHhc
Confidence            457888877 679999999999999999999999866554432    21  356777888887666543

>3qp9_A Type I polyketide synthase pikaii; rossmann fold, ketoreductase, epimerization, oxidoreductase; 1.88A {Streptomyces venezuelae}

Probab=95.90  E-value=0.4  Score=43.52  Aligned_cols=148  Identities=8%  Similarity=-0.032  Sum_probs=90.4

Q ss_pred             CCCCEEEEcCCCC-hHHHHHHHHHHHcCCeEEEEeCCcchHHHHHHHHHhhCCCcEEEEEccCCCHHHHHHHHHHHH-hH
Q 044010           45 VSGKVVIITGASS-GIGEHLAYEYARRGACLALCARREKSLEEVADTAREIGSPDVITIRADVSKVDDCRSLVEETM-NH  122 (248)
Q Consensus        45 ~~~k~~lVtGg~~-gIG~aia~~l~~~G~~V~l~~r~~~~~~~~~~~l~~~~~~~v~~~~~D~~~~~~~~~~~~~~~-~~  122 (248)
                      ..|++.++....+ +++.+++..|.++|.+|+.+.-....                        +.+++.+.+++.. ..
T Consensus        48 ~~g~wlv~~~~~~~~~~~~l~~~L~~~G~~v~~v~~~~~~------------------------~~~~~~~~l~~~~~~~  103 (525)
T 3qp9_A           48 LSGRWLVVVPEDRSAEAAPVLAALSGAGADPVQLDVSPLG------------------------DRQRLAATLGEALAAA  103 (525)
T ss_dssp             CCSEEEEEEEGGGCTTTHHHHHHHHHTTCEEEEEEECTTC------------------------CHHHHHHHHHHHHHHT
T ss_pred             CCCeEEEEECCCcchHHHHHHHHHHhcCCeEEEEeCCCCC------------------------CHHHHHHHHHhhhhcc
Confidence            4566666665443 28888999999999988776443210                        5666666666333 45


Q ss_pred             cCCccEEEEccccCCcccccccCChHHHHHHHHhhhHHHHHHHHHHhhhhhhcCCeEEEEcCccccccCCCCccchHHHH
Q 044010          123 FGRLDHLVNNAGISSVALFEDIVNITDFKQIMNINFWGSVYTTRFAVPHLRYTKGKIVVLSSAASWLTAPRMSFYNASKA  202 (248)
Q Consensus       123 ~g~id~vv~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~g~iV~isS~~~~~~~~~~~~Y~~sKa  202 (248)
                      .+.++.++|..+......... ....      ...+.+.+.++|.+...-  ...+++.++..+.... +.-..-...++
T Consensus       104 ~~~~~~v~~l~~~~~~~~~~~-~~~~------~~g~~~~l~l~qal~~~~--~~~~l~~vT~ga~~~~-~~~~~~~p~~a  173 (525)
T 3qp9_A          104 GGAVDGVLSLLAWDESAHPGH-PAPF------TRGTGATLTLVQALEDAG--VAAPLWCVTHGAVSVG-RADHVTSPAQA  173 (525)
T ss_dssp             TSCCSEEEECGGGCCCBCTTS-CTTC------BHHHHHHHHHHHHHHHTT--CCSCEEEEEESCCCCB-TTBCCSCHHHH
T ss_pred             cCCCCeEEEcccCCCCccccc-cccc------cchHHHHHHHHHHHHhcC--CCCcEEEEECCCEeCC-CCCCCCCHHHH
Confidence            678999999988654321111 0100      134566777888865431  2367777776443222 11123467899


Q ss_pred             HHHHHHHHHHHHhCCC-eEEEEEec
Q 044010          203 ALVLFFETLRVELGSD-VGVTIVTP  226 (248)
Q Consensus       203 al~~l~~~la~~~~~~-i~v~~v~p  226 (248)
                      ++.+|.++++.|+..- .++..+.+
T Consensus       174 ~l~Gl~r~~~~E~p~~~~~~vDl~~  198 (525)
T 3qp9_A          174 MVWGMGRVAALEHPERWGGLIDLPS  198 (525)
T ss_dssp             HHHHHHHHHHHHSTTTEEEEEEECS
T ss_pred             HHHHHHHHHHHhCCCceEEEEEcCC
Confidence            9999999999998542 44445543

>3jv7_A ADH-A; dehydrogenase, nucleotide binding, rossmann-fold, oxidoreduc; HET: NAD; 2.00A {Rhodococcus ruber} PDB: 2xaa_A*

Probab=95.90  E-value=0.022  Score=48.62  Aligned_cols=79  Identities=14%  Similarity=0.173  Sum_probs=50.1

Q ss_pred             CCCCEEEEcCCCChHHHHHHHHHHHc-CCeEEEEeCCcchHHHHHHHHHhhCCCcEEEEEccCCCHHHHHHHHHHHHhHc
Q 044010           45 VSGKVVIITGASSGIGEHLAYEYARR-GACLALCARREKSLEEVADTAREIGSPDVITIRADVSKVDDCRSLVEETMNHF  123 (248)
Q Consensus        45 ~~~k~~lVtGg~~gIG~aia~~l~~~-G~~V~l~~r~~~~~~~~~~~l~~~~~~~v~~~~~D~~~~~~~~~~~~~~~~~~  123 (248)
                      -.|++++|+|+ |++|...++.+... |.+|+.+++++++.+.+    ++.+...+    .|..+  +..+.+.++.. .
T Consensus       170 ~~g~~vlv~Ga-G~vG~~a~qla~~~g~~~Vi~~~~~~~~~~~~----~~lGa~~~----i~~~~--~~~~~v~~~t~-g  237 (345)
T 3jv7_A          170 GPGSTAVVIGV-GGLGHVGIQILRAVSAARVIAVDLDDDRLALA----REVGADAA----VKSGA--GAADAIRELTG-G  237 (345)
T ss_dssp             CTTCEEEEECC-SHHHHHHHHHHHHHCCCEEEEEESCHHHHHHH----HHTTCSEE----EECST--THHHHHHHHHG-G
T ss_pred             CCCCEEEEECC-CHHHHHHHHHHHHcCCCEEEEEcCCHHHHHHH----HHcCCCEE----EcCCC--cHHHHHHHHhC-C
Confidence            35889999997 99999887766666 67999999987665533    33443222    23332  22222222211 1


Q ss_pred             CCccEEEEcccc
Q 044010          124 GRLDHLVNNAGI  135 (248)
Q Consensus       124 g~id~vv~~ag~  135 (248)
                      ..+|+++.++|.
T Consensus       238 ~g~d~v~d~~G~  249 (345)
T 3jv7_A          238 QGATAVFDFVGA  249 (345)
T ss_dssp             GCEEEEEESSCC
T ss_pred             CCCeEEEECCCC
Confidence            279999999874

>1ur5_A Malate dehydrogenase; oxidoreductase, tricarboxylic acid cycle; HET: NAD; 1.75A {Chloroflexus aurantiacus} SCOP: c.2.1.5 d.162.1.1 PDB: 1uxg_A* 1guy_A* 1uxk_A* 1uxh_A* 1uxj_A* 1uxi_A*

Probab=95.90  E-value=0.081  Score=44.65  Aligned_cols=74  Identities=22%  Similarity=0.133  Sum_probs=51.0

Q ss_pred             CEEEEcCCCChHHHHHHHHHHHcCC-eEEEEeCCcchHHHHHHHHHhh----C-CCcEEEEEccCCCHHHHHHHHHHHHh
Q 044010           48 KVVIITGASSGIGEHLAYEYARRGA-CLALCARREKSLEEVADTAREI----G-SPDVITIRADVSKVDDCRSLVEETMN  121 (248)
Q Consensus        48 k~~lVtGg~~gIG~aia~~l~~~G~-~V~l~~r~~~~~~~~~~~l~~~----~-~~~v~~~~~D~~~~~~~~~~~~~~~~  121 (248)
                      +++.|+|+ |.+|..++..|+..|. +|++.++++++++.....+.+.    . ..++... .|   .+           
T Consensus         3 ~kI~VIGa-G~vG~~~a~~la~~g~~~v~L~Di~~~~~~g~~~dl~~~~~~~~~~~~i~~t-~d---~~-----------   66 (309)
T 1ur5_A            3 KKISIIGA-GFVGSTTAHWLAAKELGDIVLLDIVEGVPQGKALDLYEASPIEGFDVRVTGT-NN---YA-----------   66 (309)
T ss_dssp             CEEEEECC-SHHHHHHHHHHHHTTCSEEEEECSSSSHHHHHHHHHHTTHHHHTCCCCEEEE-SC---GG-----------
T ss_pred             CEEEEECC-CHHHHHHHHHHHHCCCCeEEEEeCCccHHHHHHHhHHHhHhhcCCCeEEEEC-CC---HH-----------
Confidence            47889998 9999999999999997 9999999988777555444432    1 1122211 22   21           


Q ss_pred             HcCCccEEEEccccCC
Q 044010          122 HFGRLDHLVNNAGISS  137 (248)
Q Consensus       122 ~~g~id~vv~~ag~~~  137 (248)
                      .+.+.|++|.++|...
T Consensus        67 a~~~aD~Vi~a~g~p~   82 (309)
T 1ur5_A           67 DTANSDVIVVTSGAPR   82 (309)
T ss_dssp             GGTTCSEEEECCCC--
T ss_pred             HHCCCCEEEEcCCCCC
Confidence            1247999999998753

>2hk9_A Shikimate dehydrogenase; shikimate pathway, drug design, oxidoreductase; HET: ATR SKM NAP; 2.20A {Aquifex aeolicus} PDB: 2hk8_A 2hk7_A

Probab=95.88  E-value=0.0053  Score=51.08  Aligned_cols=73  Identities=18%  Similarity=0.328  Sum_probs=51.3

Q ss_pred             CCCCCEEEEcCCCChHHHHHHHHHHHcCCeEEEEeCCcchHHHHHHHHHhhCCCcEEEEEccCCCHHHHHHHHHHHHhHc
Q 044010           44 DVSGKVVIITGASSGIGEHLAYEYARRGACLALCARREKSLEEVADTAREIGSPDVITIRADVSKVDDCRSLVEETMNHF  123 (248)
Q Consensus        44 ~~~~k~~lVtGg~~gIG~aia~~l~~~G~~V~l~~r~~~~~~~~~~~l~~~~~~~v~~~~~D~~~~~~~~~~~~~~~~~~  123 (248)
                      ++++++++|.|+ |++|+++++.|++.|++|.+.+|+.++.++..+    ..+  +..  .+  +   +.++       .
T Consensus       126 ~~~~~~v~iiGa-G~~g~aia~~L~~~g~~V~v~~r~~~~~~~l~~----~~g--~~~--~~--~---~~~~-------~  184 (275)
T 2hk9_A          126 EVKEKSILVLGA-GGASRAVIYALVKEGAKVFLWNRTKEKAIKLAQ----KFP--LEV--VN--S---PEEV-------I  184 (275)
T ss_dssp             TGGGSEEEEECC-SHHHHHHHHHHHHHTCEEEEECSSHHHHHHHTT----TSC--EEE--CS--C---GGGT-------G
T ss_pred             CcCCCEEEEECc-hHHHHHHHHHHHHcCCEEEEEECCHHHHHHHHH----HcC--Cee--eh--h---HHhh-------h
Confidence            678899999986 799999999999999999999998765554332    221  211  11  1   1111       2


Q ss_pred             CCccEEEEccccCC
Q 044010          124 GRLDHLVNNAGISS  137 (248)
Q Consensus       124 g~id~vv~~ag~~~  137 (248)
                      .+.|++|++.+...
T Consensus       185 ~~aDiVi~atp~~~  198 (275)
T 2hk9_A          185 DKVQVIVNTTSVGL  198 (275)
T ss_dssp             GGCSEEEECSSTTS
T ss_pred             cCCCEEEEeCCCCC
Confidence            36899999987653

>1t2d_A LDH-P, L-lactate dehydrogenase; ternary complex, oxidoreductase; HET: NAD; 1.10A {Plasmodium falciparum} SCOP: c.2.1.5 d.162.1.1 PDB: 1t25_A* 1t26_A* 1t2c_A* 1t24_A* 2x8l_A 2ydn_A* 2a94_A* 1u4s_A* 1u5a_A* 1u5c_A* 1u4o_A* 1t2e_A* 1xiv_A* 1ceq_A 1ldg_A* 1cet_A* 1oc4_A* 2a92_A* 2aa3_A*

Probab=95.86  E-value=0.16  Score=43.08  Aligned_cols=74  Identities=15%  Similarity=0.133  Sum_probs=52.3

Q ss_pred             CEEEEcCCCChHHHHHHHHHHHcCC-eEEEEeCCcchHHHHHHHHHhh----C-CCcEEEEEccCCCHHHHHHHHHHHHh
Q 044010           48 KVVIITGASSGIGEHLAYEYARRGA-CLALCARREKSLEEVADTAREI----G-SPDVITIRADVSKVDDCRSLVEETMN  121 (248)
Q Consensus        48 k~~lVtGg~~gIG~aia~~l~~~G~-~V~l~~r~~~~~~~~~~~l~~~----~-~~~v~~~~~D~~~~~~~~~~~~~~~~  121 (248)
                      +++.|.|+ |.+|..++..|+..|. +|++.++++++++.....+...    . ..++... .|   .+           
T Consensus         5 ~kI~VIGa-G~vG~~ia~~la~~g~~~v~L~Di~~~~l~~~~~~l~~~~~~~~~~~~i~~t-~d---~~-----------   68 (322)
T 1t2d_A            5 AKIVLVGS-GMIGGVMATLIVQKNLGDVVLFDIVKNMPHGKALDTSHTNVMAYSNCKVSGS-NT---YD-----------   68 (322)
T ss_dssp             CEEEEECC-SHHHHHHHHHHHHTTCCEEEEECSSSSHHHHHHHHHHTHHHHHTCCCCEEEE-CC---GG-----------
T ss_pred             CEEEEECC-CHHHHHHHHHHHhCCCCeEEEEeCCHHHHHHHHHHHHhhhhhcCCCcEEEEC-CC---HH-----------
Confidence            47888998 9999999999999998 9999999988877655554432    1 1122211 22   21           


Q ss_pred             HcCCccEEEEccccCC
Q 044010          122 HFGRLDHLVNNAGISS  137 (248)
Q Consensus       122 ~~g~id~vv~~ag~~~  137 (248)
                      .+.+.|++|.++|...
T Consensus        69 al~~aD~Vi~a~g~p~   84 (322)
T 1t2d_A           69 DLAGADVVIVTAGFTK   84 (322)
T ss_dssp             GGTTCSEEEECCSCSS
T ss_pred             HhCCCCEEEEeCCCCC
Confidence            2347999999998653

>3qha_A Putative oxidoreductase; seattle structural genomics center for infectious disease, S mycobacterium avium 104, rossmann fold; 2.25A {Mycobacterium avium}

Probab=95.86  E-value=0.039  Score=46.19  Aligned_cols=85  Identities=14%  Similarity=0.149  Sum_probs=57.9

Q ss_pred             CEEEEcCCCChHHHHHHHHHHHcCCeEEEEeCCcchHHHHHHH-------HHhhCCCcEEEEEccCCCHHHHHHHHHHHH
Q 044010           48 KVVIITGASSGIGEHLAYEYARRGACLALCARREKSLEEVADT-------AREIGSPDVITIRADVSKVDDCRSLVEETM  120 (248)
Q Consensus        48 k~~lVtGg~~gIG~aia~~l~~~G~~V~l~~r~~~~~~~~~~~-------l~~~~~~~v~~~~~D~~~~~~~~~~~~~~~  120 (248)
                      +++.|.| .|.+|..+++.|++.|++|.+.+|++++.+...+.       +.+.-.  ..++..=+.+...++++++.+.
T Consensus        16 ~~I~vIG-~G~mG~~~A~~l~~~G~~V~~~dr~~~~~~~~~~~g~~~~~~~~~~~~--aDvvi~~vp~~~~~~~v~~~l~   92 (296)
T 3qha_A           16 LKLGYIG-LGNMGAPMATRMTEWPGGVTVYDIRIEAMTPLAEAGATLADSVADVAA--ADLIHITVLDDAQVREVVGELA   92 (296)
T ss_dssp             CCEEEEC-CSTTHHHHHHHHTTSTTCEEEECSSTTTSHHHHHTTCEECSSHHHHTT--SSEEEECCSSHHHHHHHHHHHH
T ss_pred             CeEEEEC-cCHHHHHHHHHHHHCCCeEEEEeCCHHHHHHHHHCCCEEcCCHHHHHh--CCEEEEECCChHHHHHHHHHHH
Confidence            4566666 58999999999999999999999999877765431       111111  2334444556667888887777


Q ss_pred             hHcCCccEEEEcccc
Q 044010          121 NHFGRLDHLVNNAGI  135 (248)
Q Consensus       121 ~~~g~id~vv~~ag~  135 (248)
                      +...+-.++|+....
T Consensus        93 ~~l~~g~ivv~~st~  107 (296)
T 3qha_A           93 GHAKPGTVIAIHSTI  107 (296)
T ss_dssp             TTCCTTCEEEECSCC
T ss_pred             HhcCCCCEEEEeCCC
Confidence            655555677766543

>2xxj_A L-LDH, L-lactate dehydrogenase; oxidoreductase, hyperthermophIle; HET: NAD; 1.964A {Thermus thermophilus} PDB: 2xxb_A* 3zzn_A* 2v7p_A* 2e37_A* 2v6m_A* 2xxe_A 4a73_A

Probab=95.81  E-value=0.099  Score=44.18  Aligned_cols=114  Identities=16%  Similarity=0.108  Sum_probs=71.3

Q ss_pred             EEEEcCCCChHHHHHHHHHHHcC--CeEEEEeCCcchHHHHHHHHHhhC--CCcEEEEEccCCCHHHHHHHHHHHHhHcC
Q 044010           49 VVIITGASSGIGEHLAYEYARRG--ACLALCARREKSLEEVADTAREIG--SPDVITIRADVSKVDDCRSLVEETMNHFG  124 (248)
Q Consensus        49 ~~lVtGg~~gIG~aia~~l~~~G--~~V~l~~r~~~~~~~~~~~l~~~~--~~~v~~~~~D~~~~~~~~~~~~~~~~~~g  124 (248)
                      ++.|+|+ |++|.+++..|+.++  .++++.++++++++.....+....  ...+.+.. |  +.+           .+.
T Consensus         2 KI~IiGa-G~vG~~~a~~l~~~~~~~el~L~Di~~~k~~g~a~dl~~~~~~~~~~~v~~-~--~~~-----------a~~   66 (310)
T 2xxj_A            2 KVGIVGS-GMVGSATAYALALLGVAREVVLVDLDRKLAQAHAEDILHATPFAHPVWVWA-G--SYG-----------DLE   66 (310)
T ss_dssp             EEEEECC-SHHHHHHHHHHHHTTCCSEEEEECSSHHHHHHHHHHHHTTGGGSCCCEEEE-C--CGG-----------GGT
T ss_pred             EEEEECC-CHHHHHHHHHHHhCCCCCEEEEEeCChhHHHHHHHHHHHhHhhcCCeEEEE-C--CHH-----------HhC
Confidence            6788998 999999999999887  489999999887776566665432  11223322 2  232           234


Q ss_pred             CccEEEEccccCCcccccccCChHHHHHHHHhhhHHHHHHHHHHhhhhhhcCCeEEEEcCcc
Q 044010          125 RLDHLVNNAGISSVALFEDIVNITDFKQIMNINFWGSVYTTRFAVPHLRYTKGKIVVLSSAA  186 (248)
Q Consensus       125 ~id~vv~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~g~iV~isS~~  186 (248)
                      +-|++|..+|.....   . .+..   ..+..|..-...+.+.+.++  ...+.++++|.-.
T Consensus        67 ~aD~Vii~ag~~~~~---g-~~r~---dl~~~n~~i~~~i~~~i~~~--~p~a~iiv~tNPv  119 (310)
T 2xxj_A           67 GARAVVLAAGVAQRP---G-ETRL---QLLDRNAQVFAQVVPRVLEA--APEAVLLVATNPV  119 (310)
T ss_dssp             TEEEEEECCCCCCCT---T-CCHH---HHHHHHHHHHHHHHHHHHHH--CTTCEEEECSSSH
T ss_pred             CCCEEEECCCCCCCC---C-cCHH---HHHHhhHHHHHHHHHHHHHH--CCCcEEEEecCch
Confidence            899999999875322   1 1222   34555555554455544433  1347788876433

>3d1l_A Putative NADP oxidoreductase BF3122; structural genomics, PSI-2, protein structure initiative, M center for structural genomics, MCSG; 2.19A {Bacteroides fragilis}

Probab=95.81  E-value=0.032  Score=45.72  Aligned_cols=91  Identities=19%  Similarity=0.233  Sum_probs=57.2

Q ss_pred             CCCCEEEEcCCCChHHHHHHHHHHHcCCe-EEEEeCCcchHHHHHHHHHhh-------CCCcEEEEEccCCCHHHHHHHH
Q 044010           45 VSGKVVIITGASSGIGEHLAYEYARRGAC-LALCARREKSLEEVADTAREI-------GSPDVITIRADVSKVDDCRSLV  116 (248)
Q Consensus        45 ~~~k~~lVtGg~~gIG~aia~~l~~~G~~-V~l~~r~~~~~~~~~~~l~~~-------~~~~v~~~~~D~~~~~~~~~~~  116 (248)
                      +++.++.|.|+ |.+|..+++.|++.|++ |.+.+|++++.++..+.+.-.       --.+..++..= .....+.+++
T Consensus         8 ~~~m~i~iiG~-G~mG~~~a~~l~~~g~~~v~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~Dvvi~a-v~~~~~~~v~   85 (266)
T 3d1l_A            8 IEDTPIVLIGA-GNLATNLAKALYRKGFRIVQVYSRTEESARELAQKVEAEYTTDLAEVNPYAKLYIVS-LKDSAFAELL   85 (266)
T ss_dssp             GGGCCEEEECC-SHHHHHHHHHHHHHTCCEEEEECSSHHHHHHHHHHTTCEEESCGGGSCSCCSEEEEC-CCHHHHHHHH
T ss_pred             CCCCeEEEEcC-CHHHHHHHHHHHHCCCeEEEEEeCCHHHHHHHHHHcCCceeCCHHHHhcCCCEEEEe-cCHHHHHHHH
Confidence            34456888886 99999999999999998 889999887766655432100       00112222222 2234567788


Q ss_pred             HHHHhHcCCccEEEEccccCC
Q 044010          117 EETMNHFGRLDHLVNNAGISS  137 (248)
Q Consensus       117 ~~~~~~~g~id~vv~~ag~~~  137 (248)
                      +++.+...+=.+++++.+..+
T Consensus        86 ~~l~~~~~~~~ivv~~s~~~~  106 (266)
T 3d1l_A           86 QGIVEGKREEALMVHTAGSIP  106 (266)
T ss_dssp             HHHHTTCCTTCEEEECCTTSC
T ss_pred             HHHHhhcCCCcEEEECCCCCc
Confidence            777654434456777766543

>3d4o_A Dipicolinate synthase subunit A; NP_243269.1, structural GEN joint center for structural genomics, JCSG, protein structu initiative, PSI-2; HET: MSE TAR; 2.10A {Bacillus halodurans}

Probab=95.80  E-value=0.016  Score=48.50  Aligned_cols=73  Identities=21%  Similarity=0.331  Sum_probs=51.6

Q ss_pred             ccCCCCCEEEEcCCCChHHHHHHHHHHHcCCeEEEEeCCcchHHHHHHHHHhhCCCcEEEEEccCCCHHHHHHHHHHHHh
Q 044010           42 SEDVSGKVVIITGASSGIGEHLAYEYARRGACLALCARREKSLEEVADTAREIGSPDVITIRADVSKVDDCRSLVEETMN  121 (248)
Q Consensus        42 ~~~~~~k~~lVtGg~~gIG~aia~~l~~~G~~V~l~~r~~~~~~~~~~~l~~~~~~~v~~~~~D~~~~~~~~~~~~~~~~  121 (248)
                      ..+++||+++|.|. |+||+++++.+...|++|++.+|+.++.+..    .+.+   +..+  +   .++++++      
T Consensus       150 ~~~l~g~~v~IiG~-G~iG~~~a~~l~~~G~~V~~~dr~~~~~~~~----~~~g---~~~~--~---~~~l~~~------  210 (293)
T 3d4o_A          150 DFTIHGANVAVLGL-GRVGMSVARKFAALGAKVKVGARESDLLARI----AEMG---MEPF--H---ISKAAQE------  210 (293)
T ss_dssp             SSCSTTCEEEEECC-SHHHHHHHHHHHHTTCEEEEEESSHHHHHHH----HHTT---SEEE--E---GGGHHHH------
T ss_pred             CCCCCCCEEEEEee-CHHHHHHHHHHHhCCCEEEEEECCHHHHHHH----HHCC---Ceec--C---hhhHHHH------
Confidence            34789999999985 8999999999999999999999987654332    2222   1222  1   2233333      


Q ss_pred             HcCCccEEEEccc
Q 044010          122 HFGRLDHLVNNAG  134 (248)
Q Consensus       122 ~~g~id~vv~~ag  134 (248)
                       ..+.|++++++.
T Consensus       211 -l~~aDvVi~~~p  222 (293)
T 3d4o_A          211 -LRDVDVCINTIP  222 (293)
T ss_dssp             -TTTCSEEEECCS
T ss_pred             -hcCCCEEEECCC
Confidence             347999999874

>7mdh_A Protein (malate dehydrogenase); chloroplastic malate dehydrogenase (NADP+), activated by LIG chloroplastic malate dehydrogenase; 2.40A {Sorghum bicolor} SCOP: c.2.1.5 d.162.1.1 PDB: 1civ_A*

Probab=95.79  E-value=0.19  Score=43.64  Aligned_cols=119  Identities=16%  Similarity=0.108  Sum_probs=67.1

Q ss_pred             CCEEEEcCCCChHHHHHHHHHHHcCC--e---EEEEeCCcch----HHHHHHHHHhhCCCcEEEEEccCCCHHHHHHHHH
Q 044010           47 GKVVIITGASSGIGEHLAYEYARRGA--C---LALCARREKS----LEEVADTAREIGSPDVITIRADVSKVDDCRSLVE  117 (248)
Q Consensus        47 ~k~~lVtGg~~gIG~aia~~l~~~G~--~---V~l~~r~~~~----~~~~~~~l~~~~~~~v~~~~~D~~~~~~~~~~~~  117 (248)
                      ..++.|+|++|.+|.+++..|+..+.  +   +++.+.+.+.    ++.....+......-...+.  +++.        
T Consensus        32 ~~KV~ViGAaG~VG~~la~~l~~~~l~~e~~~l~L~d~d~~~~~~~~~G~amDL~h~~~p~~~~v~--i~~~--------  101 (375)
T 7mdh_A           32 LVNIAVSGAAGMISNHLLFKLASGEVFGQDQPIALKLLGSERSFQALEGVAMELEDSLYPLLREVS--IGID--------  101 (375)
T ss_dssp             CEEEEEETTTSHHHHHHHHHHHHTTTTCTTCCEEEEEECCGGGHHHHHHHHHHHHTTTCTTEEEEE--EESC--------
T ss_pred             CCEEEEECCCChHHHHHHHHHHcCCcCCCCceeEEEecCccchhhhhHHHHHhHHhhhhhhcCCcE--EecC--------
Confidence            45799999999999999999998864  3   7776655444    44444455543211111111  1111        


Q ss_pred             HHHhHcCCccEEEEccccCCcccccccCChHHHHHHHHhhhHHHHHHHHHHhhhhhhcCCeEEEEcC
Q 044010          118 ETMNHFGRLDHLVNNAGISSVALFEDIVNITDFKQIMNINFWGSVYTTRFAVPHLRYTKGKIVVLSS  184 (248)
Q Consensus       118 ~~~~~~g~id~vv~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~g~iV~isS  184 (248)
                       -.+.+.+.|++|..||.....   . .+   -.+.+..|..-.-.+.+.+.+... ..+.++++|.
T Consensus       102 -~y~~~~daDvVVitag~prkp---G-~t---R~DLl~~N~~I~k~i~~~i~~~a~-p~~ivlVvsN  159 (375)
T 7mdh_A          102 -PYEVFEDVDWALLIGAKPRGP---G-ME---RAALLDINGQIFADQGKALNAVAS-KNVKVLVVGN  159 (375)
T ss_dssp             -HHHHTTTCSEEEECCCCCCCT---T-CC---HHHHHHHHHHHHHHHHHHHHHHSC-TTCEEEECSS
T ss_pred             -CHHHhCCCCEEEEcCCCCCCC---C-CC---HHHHHHHHHHHHHHHHHHHHHhcC-CCeEEEEecC
Confidence             123445899999999874321   1 12   334555666554444444333211 2366776664

>2d5c_A AROE, shikimate 5-dehydrogenase; substrate, dimer, structural genomics, NPPSFA, Na project on protein structural and functional analyses; HET: SKM; 1.65A {Thermus thermophilus} PDB: 1wxd_A* 2cy0_A* 2ev9_A*

Probab=95.74  E-value=0.015  Score=47.93  Aligned_cols=69  Identities=17%  Similarity=0.272  Sum_probs=51.0

Q ss_pred             CCCCCEEEEcCCCChHHHHHHHHHHHcCCeEEEEeCCcchHHHHHHHHHhhCCCcEEEEEccCCCHHHHHHHHHHHHhHc
Q 044010           44 DVSGKVVIITGASSGIGEHLAYEYARRGACLALCARREKSLEEVADTAREIGSPDVITIRADVSKVDDCRSLVEETMNHF  123 (248)
Q Consensus        44 ~~~~k~~lVtGg~~gIG~aia~~l~~~G~~V~l~~r~~~~~~~~~~~l~~~~~~~v~~~~~D~~~~~~~~~~~~~~~~~~  123 (248)
                      +++| +++|.|+ |++|+++++.|.+.|++|.+.+|+.++.++..+++.   . .       ..+.+   ++        
T Consensus       114 ~l~~-~v~iiG~-G~~g~~~a~~l~~~g~~v~v~~r~~~~~~~l~~~~~---~-~-------~~~~~---~~--------  169 (263)
T 2d5c_A          114 PLKG-PALVLGA-GGAGRAVAFALREAGLEVWVWNRTPQRALALAEEFG---L-R-------AVPLE---KA--------  169 (263)
T ss_dssp             CCCS-CEEEECC-SHHHHHHHHHHHHTTCCEEEECSSHHHHHHHHHHHT---C-E-------ECCGG---GG--------
T ss_pred             CCCC-eEEEECC-cHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHhc---c-c-------hhhHh---hc--------
Confidence            6788 8999986 789999999999999999999999876666555442   1 1       11221   11        


Q ss_pred             CCccEEEEccccC
Q 044010          124 GRLDHLVNNAGIS  136 (248)
Q Consensus       124 g~id~vv~~ag~~  136 (248)
                      .+.|++|++.+..
T Consensus       170 ~~~Divi~~tp~~  182 (263)
T 2d5c_A          170 REARLLVNATRVG  182 (263)
T ss_dssp             GGCSEEEECSSTT
T ss_pred             cCCCEEEEccCCC
Confidence            2689999998765

>3p2o_A Bifunctional protein fold; structural genomics, center for structural genomics of infec diseases, csgid, alpha-beta-alpha sandwich; HET: NAD; 2.23A {Campylobacter jejuni subsp}

Probab=95.73  E-value=0.028  Score=46.89  Aligned_cols=39  Identities=31%  Similarity=0.497  Sum_probs=35.7

Q ss_pred             cCCCCCEEEEcCCCChHHHHHHHHHHHcCCeEEEEeCCc
Q 044010           43 EDVSGKVVIITGASSGIGEHLAYEYARRGACLALCARRE   81 (248)
Q Consensus        43 ~~~~~k~~lVtGg~~gIG~aia~~l~~~G~~V~l~~r~~   81 (248)
                      -+++||+++|.|.++-+|+.+|..|+.+|++|.++.|+.
T Consensus       156 i~l~Gk~vvVvGrs~iVG~p~A~lL~~~gAtVtv~h~~t  194 (285)
T 3p2o_A          156 IDLEGKDAVIIGASNIVGRPMATMLLNAGATVSVCHIKT  194 (285)
T ss_dssp             CCCTTCEEEEECCCTTTHHHHHHHHHHTTCEEEEECTTC
T ss_pred             CCCCCCEEEEECCCchHHHHHHHHHHHCCCeEEEEeCCc
Confidence            478999999999999899999999999999999987754

>3njr_A Precorrin-6Y methylase; methyltransferase, decarboxylase, transferase; HET: SAH PG4; 2.70A {Rhodobacter capsulatus}

Probab=95.73  E-value=0.15  Score=39.95  Aligned_cols=75  Identities=12%  Similarity=0.198  Sum_probs=54.0

Q ss_pred             CCCEEEEcCCCChHHHHHHHHHHHcCCeEEEEeCCcchHHHHHHHHHhhCCC-cEEEEEccCCCHHHHHHHHHHHHhHcC
Q 044010           46 SGKVVIITGASSGIGEHLAYEYARRGACLALCARREKSLEEVADTAREIGSP-DVITIRADVSKVDDCRSLVEETMNHFG  124 (248)
Q Consensus        46 ~~k~~lVtGg~~gIG~aia~~l~~~G~~V~l~~r~~~~~~~~~~~l~~~~~~-~v~~~~~D~~~~~~~~~~~~~~~~~~g  124 (248)
                      +++++|-.|++.|.   ++..+++++.+|+.++.+++..+.+.+.++..+-. ++.++..|+.+.-          ...+
T Consensus        55 ~~~~vLDlGcG~G~---~~~~la~~~~~v~~vD~s~~~~~~a~~~~~~~g~~~~v~~~~~d~~~~~----------~~~~  121 (204)
T 3njr_A           55 RGELLWDIGGGSGS---VSVEWCLAGGRAITIEPRADRIENIQKNIDTYGLSPRMRAVQGTAPAAL----------ADLP  121 (204)
T ss_dssp             TTCEEEEETCTTCH---HHHHHHHTTCEEEEEESCHHHHHHHHHHHHHTTCTTTEEEEESCTTGGG----------TTSC
T ss_pred             CCCEEEEecCCCCH---HHHHHHHcCCEEEEEeCCHHHHHHHHHHHHHcCCCCCEEEEeCchhhhc----------ccCC
Confidence            56788988887542   23344445889999999998888888777766544 6899999987621          1235


Q ss_pred             CccEEEEcc
Q 044010          125 RLDHLVNNA  133 (248)
Q Consensus       125 ~id~vv~~a  133 (248)
                      .+|.++.+.
T Consensus       122 ~~D~v~~~~  130 (204)
T 3njr_A          122 LPEAVFIGG  130 (204)
T ss_dssp             CCSEEEECS
T ss_pred             CCCEEEECC
Confidence            799998765

>3c24_A Putative oxidoreductase; YP_511008.1, structural genomics, center for structural genomics, JCSG, protein structure INI PSI-2; HET: MSE; 1.62A {Jannaschia SP}

Probab=95.70  E-value=0.074  Score=44.09  Aligned_cols=41  Identities=20%  Similarity=0.252  Sum_probs=35.8

Q ss_pred             CEEEEcCCCChHHHHHHHHHHHcCCeEEEEeCCcchHHHHH
Q 044010           48 KVVIITGASSGIGEHLAYEYARRGACLALCARREKSLEEVA   88 (248)
Q Consensus        48 k~~lVtGg~~gIG~aia~~l~~~G~~V~l~~r~~~~~~~~~   88 (248)
                      +++.|.|++|.+|.++++.|++.|++|.+.+|++++.+...
T Consensus        12 m~I~iIG~tG~mG~~la~~l~~~g~~V~~~~r~~~~~~~~~   52 (286)
T 3c24_A           12 KTVAILGAGGKMGARITRKIHDSAHHLAAIEIAPEGRDRLQ   52 (286)
T ss_dssp             CEEEEETTTSHHHHHHHHHHHHSSSEEEEECCSHHHHHHHH
T ss_pred             CEEEEECCCCHHHHHHHHHHHhCCCEEEEEECCHHHHHHHH
Confidence            47889999999999999999999999999999877665543

>4dll_A 2-hydroxy-3-oxopropionate reductase; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc, oxidoreductase; 2.11A {Polaromonas SP}

Probab=95.66  E-value=0.039  Score=46.75  Aligned_cols=89  Identities=13%  Similarity=0.143  Sum_probs=56.7

Q ss_pred             CCCCCEEEEcCCCChHHHHHHHHHHHcCCeEEEEeCCcchHHHHHHH-------HHhhCCCcEEEEEccCCCHHHHHHHH
Q 044010           44 DVSGKVVIITGASSGIGEHLAYEYARRGACLALCARREKSLEEVADT-------AREIGSPDVITIRADVSKVDDCRSLV  116 (248)
Q Consensus        44 ~~~~k~~lVtGg~~gIG~aia~~l~~~G~~V~l~~r~~~~~~~~~~~-------l~~~~~~~v~~~~~D~~~~~~~~~~~  116 (248)
                      +.+.+++.|.|. |.+|..+++.|++.|++|.+.+|++++.++..+.       +.+.- ....++..=+.+...+++++
T Consensus        28 ~~~~~~I~iIG~-G~mG~~~a~~l~~~G~~V~~~dr~~~~~~~l~~~g~~~~~~~~e~~-~~aDvVi~~vp~~~~~~~v~  105 (320)
T 4dll_A           28 DPYARKITFLGT-GSMGLPMARRLCEAGYALQVWNRTPARAASLAALGATIHEQARAAA-RDADIVVSMLENGAVVQDVL  105 (320)
T ss_dssp             -CCCSEEEEECC-TTTHHHHHHHHHHTTCEEEEECSCHHHHHHHHTTTCEEESSHHHHH-TTCSEEEECCSSHHHHHHHH
T ss_pred             ccCCCEEEEECc-cHHHHHHHHHHHhCCCeEEEEcCCHHHHHHHHHCCCEeeCCHHHHH-hcCCEEEEECCCHHHHHHHH
Confidence            345567888855 9999999999999999999999998776654331       11000 01223333445566677776


Q ss_pred             H--HHHhHcCCccEEEEccc
Q 044010          117 E--ETMNHFGRLDHLVNNAG  134 (248)
Q Consensus       117 ~--~~~~~~g~id~vv~~ag  134 (248)
                      .  .+.+...+-.++|+...
T Consensus       106 ~~~~~~~~l~~~~~vi~~st  125 (320)
T 4dll_A          106 FAQGVAAAMKPGSLFLDMAS  125 (320)
T ss_dssp             TTTCHHHHCCTTCEEEECSC
T ss_pred             cchhHHhhCCCCCEEEecCC
Confidence            5  55555545566666654

>1npy_A Hypothetical shikimate 5-dehydrogenase-like protein HI0607; structural genomics, PSI, protein structure initiative; 1.75A {Haemophilus influenzae} SCOP: c.2.1.7 c.58.1.5

Probab=95.65  E-value=0.015  Score=48.37  Aligned_cols=45  Identities=22%  Similarity=0.326  Sum_probs=39.2

Q ss_pred             CCCEEEEcCCCChHHHHHHHHHHHcCC-eEEEEeCCcchHHHHHHHH
Q 044010           46 SGKVVIITGASSGIGEHLAYEYARRGA-CLALCARREKSLEEVADTA   91 (248)
Q Consensus        46 ~~k~~lVtGg~~gIG~aia~~l~~~G~-~V~l~~r~~~~~~~~~~~l   91 (248)
                      .+|+++|.|+ ||.|++++..|++.|+ +|.+..|+.++.++..+++
T Consensus       118 ~~~~vlvlGa-Ggaarav~~~L~~~G~~~i~v~nRt~~ka~~la~~~  163 (271)
T 1npy_A          118 KNAKVIVHGS-GGMAKAVVAAFKNSGFEKLKIYARNVKTGQYLAALY  163 (271)
T ss_dssp             TTSCEEEECS-STTHHHHHHHHHHTTCCCEEEECSCHHHHHHHHHHH
T ss_pred             CCCEEEEECC-cHHHHHHHHHHHHCCCCEEEEEeCCHHHHHHHHHHc
Confidence            5788999985 8999999999999998 8999999988877776655

>1guz_A Malate dehydrogenase; oxidoreductase, tricarboxylic acid cycle, NAD; HET: NAD; 2.0A {Chlorobium vibrioforme} SCOP: c.2.1.5 d.162.1.1 PDB: 1gv1_A 1gv0_A*

Probab=95.64  E-value=0.25  Score=41.59  Aligned_cols=113  Identities=19%  Similarity=0.150  Sum_probs=67.6

Q ss_pred             EEEEcCCCChHHHHHHHHHHHc--CCeEEEEeCCcchHHHHHHHHHhh---CCCcEEEEEccCCCHHHHHHHHHHHHhHc
Q 044010           49 VVIITGASSGIGEHLAYEYARR--GACLALCARREKSLEEVADTAREI---GSPDVITIRADVSKVDDCRSLVEETMNHF  123 (248)
Q Consensus        49 ~~lVtGg~~gIG~aia~~l~~~--G~~V~l~~r~~~~~~~~~~~l~~~---~~~~v~~~~~D~~~~~~~~~~~~~~~~~~  123 (248)
                      ++.|.|+ |.+|.+++..|++.  |.+|++.++++++.+.....+...   ......+...  +|.+           ++
T Consensus         2 kI~VIGa-G~vG~~la~~la~~~~g~~V~l~D~~~~~~~~~~~~l~~~~~~~~~~~~i~~t--~d~~-----------~l   67 (310)
T 1guz_A            2 KITVIGA-GNVGATTAFRLAEKQLARELVLLDVVEGIPQGKALDMYESGPVGLFDTKVTGS--NDYA-----------DT   67 (310)
T ss_dssp             EEEEECC-SHHHHHHHHHHHHTTCCSEEEEECSSSSHHHHHHHHHHTTHHHHTCCCEEEEE--SCGG-----------GG
T ss_pred             EEEEECC-CHHHHHHHHHHHhCCCCCEEEEEeCChhHHHHHHHhHHhhhhcccCCcEEEEC--CCHH-----------HH
Confidence            5778888 99999999999985  789999999988777554333321   0011111110  2221           13


Q ss_pred             CCccEEEEccccCCcccccccCChHHHHHHHHhhhHHHHHHHHHHhhhhhhcCCeEEEEcC
Q 044010          124 GRLDHLVNNAGISSVALFEDIVNITDFKQIMNINFWGSVYTTRFAVPHLRYTKGKIVVLSS  184 (248)
Q Consensus       124 g~id~vv~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~g~iV~isS  184 (248)
                      .+.|++|.+++.....   . .+   -.+.+..|..-...+.+.+.++.  .++.++++|.
T Consensus        68 ~~aDvViiav~~p~~~---g-~~---r~dl~~~n~~i~~~i~~~i~~~~--~~~~viv~tN  119 (310)
T 1guz_A           68 ANSDIVIITAGLPRKP---G-MT---REDLLMKNAGIVKEVTDNIMKHS--KNPIIIVVSN  119 (310)
T ss_dssp             TTCSEEEECCSCCCCT---T-CC---HHHHHHHHHHHHHHHHHHHHHHC--SSCEEEECCS
T ss_pred             CCCCEEEEeCCCCCCC---C-CC---HHHHHHHHHHHHHHHHHHHHHhC--CCcEEEEEcC
Confidence            4799999999853211   1 11   22444556555555666655552  3467777754

>1y8q_A Ubiquitin-like 1 activating enzyme E1A; SUMO, heterodimer, UBL, ligase; HET: ATP; 2.25A {Homo sapiens} PDB: 1y8r_A* 3kyc_A* 3kyd_A*

Probab=95.61  E-value=0.029  Score=48.30  Aligned_cols=63  Identities=19%  Similarity=0.339  Sum_probs=47.2

Q ss_pred             cCCCCCEEEEcCCCChHHHHHHHHHHHcCC-eEEEEeCC-------------------cchHHHHHHHHHhhCC-CcEEE
Q 044010           43 EDVSGKVVIITGASSGIGEHLAYEYARRGA-CLALCARR-------------------EKSLEEVADTAREIGS-PDVIT  101 (248)
Q Consensus        43 ~~~~~k~~lVtGg~~gIG~aia~~l~~~G~-~V~l~~r~-------------------~~~~~~~~~~l~~~~~-~~v~~  101 (248)
                      .++++.+++|.|+ ||+|.++++.|+..|. ++.++|.+                   ..+.+.+.+.+++..+ .++..
T Consensus        32 ~~L~~~~VlivG~-GGlG~~ia~~La~~Gvg~itlvD~d~V~~sNL~rq~~~~~~diG~~Ka~~~~~~l~~lnp~v~v~~  110 (346)
T 1y8q_A           32 KRLRASRVLLVGL-KGLGAEIAKNLILAGVKGLTMLDHEQVTPEDPGAQFLIRTGSVGRNRAEASLERAQNLNPMVDVKV  110 (346)
T ss_dssp             HHHHTCEEEEECC-SHHHHHHHHHHHHHTCSEEEEECCCBCCSSCGGGCTTSCSSCTTSBHHHHHHHHHHHTCTTSEEEE
T ss_pred             HHHhCCeEEEECC-CHHHHHHHHHHHHcCCCEEEEEECCCcchhhCCCCCccccccCcCCHHHHHHHHHHhHCCCeEEEE
Confidence            4678999999986 8999999999999998 89998643                   2467777778877653 24444


Q ss_pred             EEccC
Q 044010          102 IRADV  106 (248)
Q Consensus       102 ~~~D~  106 (248)
                      +..++
T Consensus       111 ~~~~~  115 (346)
T 1y8q_A          111 DTEDI  115 (346)
T ss_dssp             ECSCG
T ss_pred             Eeccc
Confidence            54444

>3pef_A 6-phosphogluconate dehydrogenase, NAD-binding; gamma-hydroxybutyrate dehydrogenase, succinic semialdehyde R geobacter metallireducens; HET: NAP; 2.07A {Geobacter metallireducens}

Probab=95.57  E-value=0.044  Score=45.51  Aligned_cols=85  Identities=14%  Similarity=0.168  Sum_probs=55.1

Q ss_pred             CEEEEcCCCChHHHHHHHHHHHcCCeEEEEeCCcchHHHHHHH-------HHhhCCCcEEEEEccCCCHHHHHHHH---H
Q 044010           48 KVVIITGASSGIGEHLAYEYARRGACLALCARREKSLEEVADT-------AREIGSPDVITIRADVSKVDDCRSLV---E  117 (248)
Q Consensus        48 k~~lVtGg~~gIG~aia~~l~~~G~~V~l~~r~~~~~~~~~~~-------l~~~~~~~v~~~~~D~~~~~~~~~~~---~  117 (248)
                      +++.|.|. |.+|.++++.|++.|++|.+.+|++++.+...+.       +.+.- .+..++..=+.+...+++++   +
T Consensus         2 ~~i~iIG~-G~mG~~~a~~l~~~G~~V~~~dr~~~~~~~~~~~g~~~~~~~~~~~-~~aDvvi~~vp~~~~~~~v~~~~~   79 (287)
T 3pef_A            2 QKFGFIGL-GIMGSAMAKNLVKAGCSVTIWNRSPEKAEELAALGAERAATPCEVV-ESCPVTFAMLADPAAAEEVCFGKH   79 (287)
T ss_dssp             CEEEEECC-SHHHHHHHHHHHHTTCEEEEECSSGGGGHHHHHTTCEECSSHHHHH-HHCSEEEECCSSHHHHHHHHHSTT
T ss_pred             CEEEEEee-cHHHHHHHHHHHHCCCeEEEEcCCHHHHHHHHHCCCeecCCHHHHH-hcCCEEEEEcCCHHHHHHHHcCcc
Confidence            46777765 8999999999999999999999998877765431       00000 01223334445556677777   6


Q ss_pred             HHHhHcCCccEEEEccc
Q 044010          118 ETMNHFGRLDHLVNNAG  134 (248)
Q Consensus       118 ~~~~~~g~id~vv~~ag  134 (248)
                      ++.+...+=.++|+..+
T Consensus        80 ~l~~~l~~~~~vi~~st   96 (287)
T 3pef_A           80 GVLEGIGEGRGYVDMST   96 (287)
T ss_dssp             CHHHHCCTTCEEEECSC
T ss_pred             hHhhcCCCCCEEEeCCC
Confidence            66555444456666643

>1dih_A Dihydrodipicolinate reductase; oxidoreductase; HET: NDP; 2.20A {Escherichia coli} SCOP: c.2.1.3 d.81.1.3 PDB: 1arz_A* 1dru_A* 1drv_A* 1drw_A*

Probab=95.56  E-value=0.025  Score=47.05  Aligned_cols=87  Identities=17%  Similarity=0.235  Sum_probs=55.1

Q ss_pred             CCCCEEEEcCCCChHHHHHHHHHHHc-CCeEE-EEeCCcchH--HHHH-------------HHHHhhCCCcEEEEEccCC
Q 044010           45 VSGKVVIITGASSGIGEHLAYEYARR-GACLA-LCARREKSL--EEVA-------------DTAREIGSPDVITIRADVS  107 (248)
Q Consensus        45 ~~~k~~lVtGg~~gIG~aia~~l~~~-G~~V~-l~~r~~~~~--~~~~-------------~~l~~~~~~~v~~~~~D~~  107 (248)
                      ++.-++.|+|++|.+|+.+++.+++. |++++ +++++.++.  ++..             +.+.+.- ..+ =+.+|++
T Consensus         3 ~~~mkV~V~Ga~G~mG~~~~~~~~~~~~~elva~~d~~~~~~~g~d~~~~~g~~~~~v~~~~dl~~~l-~~~-DvVIDft   80 (273)
T 1dih_A            3 DANIRVAIAGAGGRMGRQLIQAALALEGVQLGAALEREGSSLLGSDAGELAGAGKTGVTVQSSLDAVK-DDF-DVFIDFT   80 (273)
T ss_dssp             CCBEEEEETTTTSHHHHHHHHHHHHSTTEECCCEECCTTCTTCSCCTTCSSSSSCCSCCEESCSTTTT-TSC-SEEEECS
T ss_pred             CCCcEEEEECCCCHHHHHHHHHHHhCCCCEEEEEEecCchhhhhhhHHHHcCCCcCCceecCCHHHHh-cCC-CEEEEcC
Confidence            34457999999999999999998864 67776 556654320  0000             0000000 011 1557999


Q ss_pred             CHHHHHHHHHHHHhHcCCccEEEEcccc
Q 044010          108 KVDDCRSLVEETMNHFGRLDHLVNNAGI  135 (248)
Q Consensus       108 ~~~~~~~~~~~~~~~~g~id~vv~~ag~  135 (248)
                      .++...+.+..+.+.  ++++++-+.|.
T Consensus        81 ~p~~~~~~~~~a~~~--G~~vVigTtG~  106 (273)
T 1dih_A           81 RPEGTLNHLAFCRQH--GKGMVIGTTGF  106 (273)
T ss_dssp             CHHHHHHHHHHHHHT--TCEEEECCCCC
T ss_pred             ChHHHHHHHHHHHhC--CCCEEEECCCC
Confidence            999888888887765  67788767653

>1y8q_B Anthracycline-, ubiquitin-like 2 activating enzyme E1B; SUMO, heterodimer, UBL, ligase; HET: ATP; 2.25A {Homo sapiens} PDB: 1y8r_B* 3kyc_B* 3kyd_B* 2px9_A

Probab=95.54  E-value=0.025  Score=52.52  Aligned_cols=82  Identities=17%  Similarity=0.268  Sum_probs=56.7

Q ss_pred             CCCCCEEEEcCCCChHHHHHHHHHHHcCC-eEEEEeCCc-------------------chHHHHHHHHHhhCC-CcEEEE
Q 044010           44 DVSGKVVIITGASSGIGEHLAYEYARRGA-CLALCARRE-------------------KSLEEVADTAREIGS-PDVITI  102 (248)
Q Consensus        44 ~~~~k~~lVtGg~~gIG~aia~~l~~~G~-~V~l~~r~~-------------------~~~~~~~~~l~~~~~-~~v~~~  102 (248)
                      .+++.+++|.|+ ||+|..+++.|+..|. ++.+++.+.                   .+.+.+.+.+++..+ .++..+
T Consensus        14 kL~~s~VlVVGa-GGLGsevak~La~aGVG~ItlvD~D~Ve~SNLnRQflf~~~dVGk~KAeaaa~~L~~iNP~v~V~a~   92 (640)
T 1y8q_B           14 AVAGGRVLVVGA-GGIGCELLKNLVLTGFSHIDLIDLDTIDVSNLNRQFLFQKKHVGRSKAQVAKESVLQFYPKANIVAY   92 (640)
T ss_dssp             HHHHCEEEEECC-SHHHHHHHHHHHHHTCCEEEEEECCBCCGGGGGTCTTCCGGGTTSBHHHHHHHHHHTTCTTCEEEEE
T ss_pred             HHhcCeEEEECc-CHHHHHHHHHHHHcCCCeEEEecCCEEChhhcCCCcCCChhHcChHHHHHHHHHHHHHCCCCeEEEE
Confidence            567789999987 8999999999999998 899998754                   245566666666543 355666


Q ss_pred             EccCCCHHHHHHHHHHHHhHcCCccEEEEcc
Q 044010          103 RADVSKVDDCRSLVEETMNHFGRLDHLVNNA  133 (248)
Q Consensus       103 ~~D~~~~~~~~~~~~~~~~~~g~id~vv~~a  133 (248)
                      ..+++......++       +.++|+||.+.
T Consensus        93 ~~~i~~~~~~~~~-------~~~~DlVvda~  116 (640)
T 1y8q_B           93 HDSIMNPDYNVEF-------FRQFILVMNAL  116 (640)
T ss_dssp             ESCTTSTTSCHHH-------HTTCSEEEECC
T ss_pred             ecccchhhhhHhh-------hcCCCEEEECC
Confidence            6666543211122       23678887763

>1tt5_B Ubiquitin-activating enzyme E1C isoform 1; cell cycle, ligase; 2.60A {Homo sapiens} SCOP: c.111.1.2 PDB: 3dbl_B 3dbr_B 3dbh_B 3gzn_B* 1yov_B 1r4m_B 1r4n_B*

Probab=95.53  E-value=0.029  Score=49.80  Aligned_cols=61  Identities=18%  Similarity=0.194  Sum_probs=44.8

Q ss_pred             CCCCEEEEcCCCChHHHHHHHHHHHcCC-eEEEEeCCc-------------------chHHHHHHHHHhhCC-CcEEEEE
Q 044010           45 VSGKVVIITGASSGIGEHLAYEYARRGA-CLALCARRE-------------------KSLEEVADTAREIGS-PDVITIR  103 (248)
Q Consensus        45 ~~~k~~lVtGg~~gIG~aia~~l~~~G~-~V~l~~r~~-------------------~~~~~~~~~l~~~~~-~~v~~~~  103 (248)
                      +++.+++|.|+ ||+|.++++.|+..|. ++.+++.+.                   .+.+.+.+.+++..+ .++..+.
T Consensus        38 L~~~~VlvvG~-GGlGs~va~~La~aGvg~i~ivD~D~Ve~sNL~RQ~l~~~~diG~~Ka~~a~~~l~~lnp~v~v~~~~  116 (434)
T 1tt5_B           38 LDTCKVLVIGA-GGLGCELLKNLALSGFRQIHVIDMDTIDVSNLNRQFLFRPKDIGRPKAEVAAEFLNDRVPNCNVVPHF  116 (434)
T ss_dssp             HHTCCEEEECS-STHHHHHHHHHHHTTCCCEEEEECCBCCGGGTTTCTTCCGGGTTSBHHHHHHHHHHHHSTTCCCEEEE
T ss_pred             hcCCEEEEECc-CHHHHHHHHHHHHcCCCEEEEEcCCEechhccCCCcCCChhHcCcHHHHHHHHHHHhhCCCCEEEEEe
Confidence            36788999987 8999999999999998 899996532                   366677777777543 3445554


Q ss_pred             ccC
Q 044010          104 ADV  106 (248)
Q Consensus       104 ~D~  106 (248)
                      .++
T Consensus       117 ~~i  119 (434)
T 1tt5_B          117 NKI  119 (434)
T ss_dssp             SCG
T ss_pred             ccc
Confidence            443

>3e05_A Precorrin-6Y C5,15-methyltransferase (decarboxyla; porphyrin metabolism, S-adenosyl-methionine; 1.80A {Geobacter metallireducens} SCOP: c.66.1.0

Probab=95.53  E-value=0.2  Score=38.89  Aligned_cols=77  Identities=14%  Similarity=0.071  Sum_probs=54.9

Q ss_pred             CCCEEEEcCCCChHHHHHHHHHHHcC--CeEEEEeCCcchHHHHHHHHHhhCCCcEEEEEccCCCHHHHHHHHHHHHhHc
Q 044010           46 SGKVVIITGASSGIGEHLAYEYARRG--ACLALCARREKSLEEVADTAREIGSPDVITIRADVSKVDDCRSLVEETMNHF  123 (248)
Q Consensus        46 ~~k~~lVtGg~~gIG~aia~~l~~~G--~~V~l~~r~~~~~~~~~~~l~~~~~~~v~~~~~D~~~~~~~~~~~~~~~~~~  123 (248)
                      .+.++|-.|++.|.   ++..+++.+  .+|+.++.+++..+.+.+.++..+..++.++..|+.+..          ...
T Consensus        40 ~~~~vLDiG~G~G~---~~~~la~~~~~~~v~~vD~s~~~~~~a~~~~~~~~~~~v~~~~~d~~~~~----------~~~  106 (204)
T 3e05_A           40 DDLVMWDIGAGSAS---VSIEASNLMPNGRIFALERNPQYLGFIRDNLKKFVARNVTLVEAFAPEGL----------DDL  106 (204)
T ss_dssp             TTCEEEEETCTTCH---HHHHHHHHCTTSEEEEEECCHHHHHHHHHHHHHHTCTTEEEEECCTTTTC----------TTS
T ss_pred             CCCEEEEECCCCCH---HHHHHHHHCCCCEEEEEeCCHHHHHHHHHHHHHhCCCcEEEEeCChhhhh----------hcC
Confidence            56789988887543   334444444  699999999988888888777666557899999986431          122


Q ss_pred             CCccEEEEcccc
Q 044010          124 GRLDHLVNNAGI  135 (248)
Q Consensus       124 g~id~vv~~ag~  135 (248)
                      +.+|+++.+.+.
T Consensus       107 ~~~D~i~~~~~~  118 (204)
T 3e05_A          107 PDPDRVFIGGSG  118 (204)
T ss_dssp             CCCSEEEESCCT
T ss_pred             CCCCEEEECCCC
Confidence            579999887643

>4eez_A Alcohol dehydrogenase 1; site-saturation mutagenesis, directed evolution, isobutyraldehyde, biofuel, oxidoreductase; HET: PG4; 1.90A {Lactococcus lactis subsp} PDB: 4eex_A*

Probab=95.50  E-value=0.023  Score=48.49  Aligned_cols=77  Identities=19%  Similarity=0.251  Sum_probs=48.1

Q ss_pred             CCCCEEEEcCCCChHHHHHHHHHHHc-CCeEEEEeCCcchHHHHHHHHHhhCCCcEEEEEccCCCHHHHHHHHHHHHhHc
Q 044010           45 VSGKVVIITGASSGIGEHLAYEYARR-GACLALCARREKSLEEVADTAREIGSPDVITIRADVSKVDDCRSLVEETMNHF  123 (248)
Q Consensus        45 ~~~k~~lVtGg~~gIG~aia~~l~~~-G~~V~l~~r~~~~~~~~~~~l~~~~~~~v~~~~~D~~~~~~~~~~~~~~~~~~  123 (248)
                      -.|.+++|.|+ |++|...+..+... |++|+.+++++++.+.    .++.+..    ...|.++.+..+++    .+..
T Consensus       162 ~~g~~VlV~Ga-G~~g~~a~~~a~~~~g~~Vi~~~~~~~r~~~----~~~~Ga~----~~i~~~~~~~~~~v----~~~t  228 (348)
T 4eez_A          162 KPGDWQVIFGA-GGLGNLAIQYAKNVFGAKVIAVDINQDKLNL----AKKIGAD----VTINSGDVNPVDEI----KKIT  228 (348)
T ss_dssp             CTTCEEEEECC-SHHHHHHHHHHHHTSCCEEEEEESCHHHHHH----HHHTTCS----EEEEC-CCCHHHHH----HHHT
T ss_pred             CCCCEEEEEcC-CCccHHHHHHHHHhCCCEEEEEECcHHHhhh----hhhcCCe----EEEeCCCCCHHHHh----hhhc
Confidence            46889999987 78888777777765 6799999998765432    2333332    22455554433332    2322


Q ss_pred             C--CccEEEEccc
Q 044010          124 G--RLDHLVNNAG  134 (248)
Q Consensus       124 g--~id~vv~~ag  134 (248)
                      +  .+|.++.+++
T Consensus       229 ~g~g~d~~~~~~~  241 (348)
T 4eez_A          229 GGLGVQSAIVCAV  241 (348)
T ss_dssp             TSSCEEEEEECCS
T ss_pred             CCCCceEEEEecc
Confidence            2  5788887765

>1a5z_A L-lactate dehydrogenase; oxidoreductase, glycolysis, hyperthermophiles, thermotoga MA protein stability; HET: FBP NAD; 2.10A {Thermotoga maritima} SCOP: c.2.1.5 d.162.1.1

Probab=95.49  E-value=0.078  Score=44.92  Aligned_cols=112  Identities=15%  Similarity=0.100  Sum_probs=66.1

Q ss_pred             EEEEcCCCChHHHHHHHHHHHcCC--eEEEEeCCcchHHHHHHHHHhhCC--CcEEEEEccCCCHHHHHHHHHHHHhHcC
Q 044010           49 VVIITGASSGIGEHLAYEYARRGA--CLALCARREKSLEEVADTAREIGS--PDVITIRADVSKVDDCRSLVEETMNHFG  124 (248)
Q Consensus        49 ~~lVtGg~~gIG~aia~~l~~~G~--~V~l~~r~~~~~~~~~~~l~~~~~--~~v~~~~~D~~~~~~~~~~~~~~~~~~g  124 (248)
                      ++.|.|+ |.+|.+++..|++.|.  +|++.++++++.+.....+.....  .......   ++.+.           ..
T Consensus         2 kI~VIGa-G~~G~~la~~l~~~g~~~~V~l~D~~~~~~~~~~~~l~~~~~~~~~~~i~~---~d~~~-----------~~   66 (319)
T 1a5z_A            2 KIGIVGL-GRVGSSTAFALLMKGFAREMVLIDVDKKRAEGDALDLIHGTPFTRRANIYA---GDYAD-----------LK   66 (319)
T ss_dssp             EEEEECC-SHHHHHHHHHHHHHTCCSEEEEECSSHHHHHHHHHHHHHHGGGSCCCEEEE---CCGGG-----------GT
T ss_pred             EEEEECC-CHHHHHHHHHHHhCCCCCeEEEEeCChHHHHHHHHHHHhhhhhcCCcEEEe---CCHHH-----------hC
Confidence            5778887 9999999999999998  999999998777665544432110  0111111   23221           23


Q ss_pred             CccEEEEccccCCcccccccCChHHHHHHHHhhhHHHHHHHHHHhhhhhhcCCeEEEEcC
Q 044010          125 RLDHLVNNAGISSVALFEDIVNITDFKQIMNINFWGSVYTTRFAVPHLRYTKGKIVVLSS  184 (248)
Q Consensus       125 ~id~vv~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~g~iV~isS  184 (248)
                      +.|++|.+++.....   . .+..   +.+..|..-...+.+.+.+.-  ..+.++++|.
T Consensus        67 ~aDvViiav~~~~~~---g-~~r~---dl~~~n~~i~~~i~~~i~~~~--~~~~ii~~tN  117 (319)
T 1a5z_A           67 GSDVVIVAAGVPQKP---G-ETRL---QLLGRNARVMKEIARNVSKYA--PDSIVIVVTN  117 (319)
T ss_dssp             TCSEEEECCCCCCCS---S-CCHH---HHHHHHHHHHHHHHHHHHHHC--TTCEEEECSS
T ss_pred             CCCEEEEccCCCCCC---C-CCHH---HHHHHHHHHHHHHHHHHHhhC--CCeEEEEeCC
Confidence            789999999865421   1 1112   233445444444455544431  3456666544

>3doj_A AT3G25530, dehydrogenase-like protein; gamma-hydroxybutyrate dehydrogenase, 4-hydroxybutyrate dehydrogenase; 2.10A {Arabidopsis thaliana}

Probab=95.48  E-value=0.041  Score=46.35  Aligned_cols=87  Identities=13%  Similarity=0.090  Sum_probs=53.5

Q ss_pred             CCCEEEEcCCCChHHHHHHHHHHHcCCeEEEEeCCcchHHHHHHH-------HHhhCCCcEEEEEccCCCHHHHHHHH--
Q 044010           46 SGKVVIITGASSGIGEHLAYEYARRGACLALCARREKSLEEVADT-------AREIGSPDVITIRADVSKVDDCRSLV--  116 (248)
Q Consensus        46 ~~k~~lVtGg~~gIG~aia~~l~~~G~~V~l~~r~~~~~~~~~~~-------l~~~~~~~v~~~~~D~~~~~~~~~~~--  116 (248)
                      +-+++.|.| .|.+|..+++.|++.|++|.+.+|++++.+...+.       ..+.- ....++..=+.+...+++++  
T Consensus        20 ~m~~I~iIG-~G~mG~~~A~~l~~~G~~V~~~dr~~~~~~~l~~~g~~~~~~~~~~~-~~aDvvi~~vp~~~~~~~v~~~   97 (310)
T 3doj_A           20 HMMEVGFLG-LGIMGKAMSMNLLKNGFKVTVWNRTLSKCDELVEHGASVCESPAEVI-KKCKYTIAMLSDPCAALSVVFD   97 (310)
T ss_dssp             CSCEEEEEC-CSHHHHHHHHHHHHTTCEEEEECSSGGGGHHHHHTTCEECSSHHHHH-HHCSEEEECCSSHHHHHHHHHS
T ss_pred             cCCEEEEEC-ccHHHHHHHHHHHHCCCeEEEEeCCHHHHHHHHHCCCeEcCCHHHHH-HhCCEEEEEcCCHHHHHHHHhC
Confidence            345677776 58999999999999999999999998877665431       00000 01223333344455666665  


Q ss_pred             -HHHHhHcCCccEEEEccc
Q 044010          117 -EETMNHFGRLDHLVNNAG  134 (248)
Q Consensus       117 -~~~~~~~g~id~vv~~ag  134 (248)
                       +.+.+...+-.++|+...
T Consensus        98 ~~~l~~~l~~g~~vv~~st  116 (310)
T 3doj_A           98 KGGVLEQICEGKGYIDMST  116 (310)
T ss_dssp             TTCGGGGCCTTCEEEECSC
T ss_pred             chhhhhccCCCCEEEECCC
Confidence             444443334455666543

---

Homologous Structure Domains

Structure Domains Detected by RPS-BLAST

Original result of RPS-BLAST against SCOP70(version1.75) database

ID	Length	Definition	E-value
Query	248
d1xg5a_	257	c.2.1.2 (A:) Putative dehydrogenase ARPG836 (MGC41	7e-54
d1spxa_	264	c.2.1.2 (A:) Glucose dehydrogenase (5l265) {Nemato	2e-52
d1yb1a_	244	c.2.1.2 (A:) 17-beta-hydroxysteroid dehydrogenase	6e-52
d2d1ya1	248	c.2.1.2 (A:2-249) Hypothetical protein TTHA0369 {T	2e-50
d2ew8a1	247	c.2.1.2 (A:3-249) (s)-1-phenylethanol dehydrogenas	7e-50
d1ydea1	250	c.2.1.2 (A:4-253) Retinal dehydrogenase/reductase	2e-48
d1hxha_	253	c.2.1.2 (A:) 3beta/17beta hydroxysteroid dehydroge	6e-48
d1xkqa_	272	c.2.1.2 (A:) Hypothetical protein R05D8.7 {Caenorh	7e-48
d1sbya1	254	c.2.1.2 (A:1-254) Drosophila alcohol dehydrogenase	2e-47
d1xu9a_	269	c.2.1.2 (A:) 11-beta-hydroxysteroid dehydrogenase	8e-47
d1bdba_	276	c.2.1.2 (A:) Cis-biphenyl-2,3-dihydrodiol-2,3-dehy	6e-46
d2ae2a_	259	c.2.1.2 (A:) Tropinone reductase {Jimsonweed (Datu	1e-45
d2gdza1	254	c.2.1.2 (A:3-256) 15-hydroxyprostaglandin dehydrog	2e-45
d1xhla_	274	c.2.1.2 (A:) Hypothetical protein F25D1.5 {Caenorh	3e-44
d1zk4a1	251	c.2.1.2 (A:1-251) R-specific alcohol dehydrogenase	5e-44
d1hdca_	254	c.2.1.2 (A:) 3-alpha,20-beta-hydroxysteroid dehydr	6e-44
d1vl8a_	251	c.2.1.2 (A:) Gluconate 5-dehydrogenase {Thermotoga	6e-44
d1xq1a_	259	c.2.1.2 (A:) Tropinone reductase {Thale cress (Ara	4e-43
d1cyda_	242	c.2.1.2 (A:) Carbonyl reductase {Mouse (Mus muscul	6e-43
d1gz6a_	302	c.2.1.2 (A:) (3R)-hydroxyacyl-CoA dehydrogenase do	7e-43
d1iy8a_	258	c.2.1.2 (A:) Levodione reductase {Corynebacterium	4e-42
d1ja9a_	259	c.2.1.2 (A:) 1,3,6,8-tetrahydroxynaphthalene reduc	8e-42
d1pr9a_	244	c.2.1.2 (A:) Carbonyl reductase {Human (Homo sapie	1e-41
d1ulsa_	242	c.2.1.2 (A:) beta-keto acyl carrier protein reduct	2e-41
d2bgka1	268	c.2.1.2 (A:11-278) Rhizome secoisolariciresinol de	5e-41
d1h5qa_	260	c.2.1.2 (A:) Mannitol dehydrogenase {Mushroom (Aga	6e-41
d1yxma1	297	c.2.1.2 (A:7-303) Peroxisomal trans 2-enoyl CoA re	5e-40
d2bd0a1	240	c.2.1.2 (A:2-241) Bacterial sepiapterin reductase	5e-40
d1g0oa_	272	c.2.1.2 (A:) 1,3,8-trihydroxynaphtalene reductase	6e-40
d2rhca1	257	c.2.1.2 (A:5-261) beta-keto acyl carrier protein r	5e-39
d1zema1	260	c.2.1.2 (A:3-262) Xylitol dehydrogenase {Gluconoba	7e-39
d1geea_	261	c.2.1.2 (A:) Glucose dehydrogenase {Bacillus megat	9e-39
d1yo6a1	250	c.2.1.2 (A:1-250) Putative carbonyl reductase snif	7e-38
d1ae1a_	258	c.2.1.2 (A:) Tropinone reductase {Jimsonweed (Datu	7e-38
d1fmca_	255	c.2.1.2 (A:) 7-alpha-hydroxysteroid dehydrogenase	2e-37
d2c07a1	251	c.2.1.2 (A:54-304) beta-keto acyl carrier protein	1e-36
d1wmaa1	275	c.2.1.2 (A:2-276) Carbonyl reductase/20beta-hydrox	2e-36
d1x1ta1	260	c.2.1.2 (A:1-260) D(-)-3-hydroxybutyrate dehydroge	2e-36
d1nffa_	244	c.2.1.2 (A:) Putative oxidoreductase Rv2002 {Mycob	3e-36
d1zmta1	252	c.2.1.2 (A:2-253) Halohydrin dehalogenase HheC {Ag	1e-35
d2a4ka1	241	c.2.1.2 (A:2-242) beta-keto acyl carrier protein r	2e-35
d1q7ba_	243	c.2.1.2 (A:) beta-keto acyl carrier protein reduct	4e-35
d1oaaa_	259	c.2.1.2 (A:) Sepiapterin reductase {Mouse (Mus mus	5e-35
d1gega_	255	c.2.1.2 (A:) meso-2,3-butanediol dehydrogenase {Kl	2e-34
d1w6ua_	294	c.2.1.2 (A:) 2,4-dienoyl-CoA reductase, mitochondr	3e-34
d1edoa_	244	c.2.1.2 (A:) beta-keto acyl carrier protein reduct	6e-34
d1jtva_	285	c.2.1.2 (A:) Human estrogenic 17beta-hydroxysteroi	9e-34
d2ag5a1	245	c.2.1.2 (A:1-245) Dehydrogenase/reductase SDR fami	6e-32
d1uzma1	237	c.2.1.2 (A:9-245) beta-keto acyl carrier protein r	3e-31
d1k2wa_	256	c.2.1.2 (A:) Sorbitol dehydrogenase {Rhodobacter s	4e-31
d1o5ia_	234	c.2.1.2 (A:) beta-keto acyl carrier protein reduct	6e-31
d1dhra_	236	c.2.1.2 (A:) Dihydropteridin reductase (pteridine	1e-30
d1ulua_	256	c.2.1.2 (A:) Enoyl-ACP reductase {Thermus thermoph	1e-29
d1ooea_	235	c.2.1.2 (A:) Dihydropteridin reductase (pteridine	2e-28
d1mxha_	266	c.2.1.2 (A:) Dihydropteridin reductase (pteridine	3e-27
d1uaya_	241	c.2.1.2 (A:) Type II 3-hydroxyacyl-CoA dehydrogena	4e-26
d1snya_	248	c.2.1.2 (A:) Carbonyl reductase sniffer {Fruit fly	1e-25
d2o23a1	248	c.2.1.2 (A:6-253) Type II 3-hydroxyacyl-CoA dehydr	3e-25
d1qsga_	258	c.2.1.2 (A:) Enoyl-ACP reductase {Escherichia coli	7e-25
d1luaa1	191	c.2.1.7 (A:98-288) Methylene-tetrahydromethanopter	1e-20
d1fjha_	257	c.2.1.2 (A:) 3-alpha-hydroxysteroid dehydrogenase	7e-19
d1e7wa_	284	c.2.1.2 (A:) Dihydropteridin reductase (pteridine	1e-18
d2fr1a1	259	c.2.1.2 (A:1657-1915) Erythromycin synthase, eryAI	6e-17
d2pd4a1	274	c.2.1.2 (A:2-275) Enoyl-ACP reductase {Helicobacte	1e-16
d1jaya_	212	c.2.1.6 (A:) Coenzyme F420H2:NADP+ oxidoreductase	8e-16
d1uh5a_	329	c.2.1.2 (A:) Enoyl-ACP reductase {Malaria parasite	1e-12
d2h7ma1	268	c.2.1.2 (A:2-269) Enoyl-ACP reductase {Mycobacteri	3e-11
d1d7oa_	297	c.2.1.2 (A:) Enoyl-ACP reductase {Oil seed rape (B	8e-11
d1t2aa_	347	c.2.1.2 (A:) GDP-mannose 4,6-dehydratase {Human (H	3e-06
d1z45a2	347	c.2.1.2 (A:11-357) Uridine diphosphogalactose-4-ep	2e-04
d1y1pa1	342	c.2.1.2 (A:2-343) Aldehyde reductase II {Sporobolo	3e-04
d1udca_	338	c.2.1.2 (A:) Uridine diphosphogalactose-4-epimeras	4e-04
d1db3a_	357	c.2.1.2 (A:) GDP-mannose 4,6-dehydratase {Escheric	0.001
d1kewa_	361	c.2.1.2 (A:) dTDP-glucose 4,6-dehydratase (RmlB) {	0.002
d1rkxa_	356	c.2.1.2 (A:) CDP-glucose-4,6-dehydratase {Yersinia	0.004

>d1xg5a_ c.2.1.2 (A:) Putative dehydrogenase ARPG836 (MGC4172) {Human (Homo sapiens) [TaxId: 9606]} Length = 257

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Putative dehydrogenase ARPG836 (MGC4172)
species: Human (Homo sapiens) [TaxId: 9606]

 Score =  172 bits (437), Expect = 7e-54
 Identities = 52/199 (26%), Positives = 94/199 (47%), Gaps = 10/199 (5%)

Query: 47  GKVVIITGASSGIGEHLAYEYARRGACLALCARREKSLEEVADTAREIGSP-DVITIRAD 105
            ++ ++TGAS GIG  +A    ++G  +  CAR   ++EE+A   +  G P  +I  R D
Sbjct: 10  DRLALVTGASGGIGAAVARALVQQGLKVVGCARTVGNIEELAAECKSAGYPGTLIPYRCD 69

Query: 106 VSKVDDCRSLVEETMNHFGRLDHLVNNAGISSVALFEDIVNITDFKQIMNINFWGSVYTT 165
           +S  +D  S+     +    +D  +NNAG++         + + +K + N+N       T
Sbjct: 70  LSNEEDILSMFSAIRSQHSGVDICINNAGLARPDTLLSG-STSGWKDMFNVNVLALSICT 128

Query: 166 RFAVPHLR---YTKGKIVVLSSAASWLTAPR--MSFYNASKAALVLFFETLRVEL---GS 217
           R A   ++      G I+ ++S +     P     FY+A+K A+    E LR EL    +
Sbjct: 129 REAYQSMKERNVDDGHIININSMSGHRVLPLSVTHFYSATKYAVTALTEGLRQELREAQT 188

Query: 218 DVGVTIVTPGFIESELTQG 236
            +  T ++PG +E++    
Sbjct: 189 HIRATCISPGVVETQFAFK 207

>d1spxa_ c.2.1.2 (A:) Glucose dehydrogenase (5l265) {Nematode (Caenorhabditis elegans) [TaxId: 6239]} Length = 264

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Glucose dehydrogenase (5l265)
species: Nematode (Caenorhabditis elegans) [TaxId: 6239]

 Score =  168 bits (427), Expect = 2e-52
 Identities = 59/198 (29%), Positives = 96/198 (48%), Gaps = 7/198 (3%)

Query: 46  SGKVVIITGASSGIGEHLAYEYARRGACLALCARREKSLEEVADTAREIG--SPDVITIR 103
           + KV IITG+S+GIG   A  +AR GA + +  R  + LEE        G    +V ++ 
Sbjct: 4   AEKVAIITGSSNGIGRATAVLFAREGAKVTITGRHAERLEETRQQILAAGVSEQNVNSVV 63

Query: 104 ADVSKVDDCRSLVEETMNHFGRLDHLVNNAGISSVALFEDI---VNITDFKQIMNINFWG 160
           ADV+       ++  T+  FG+LD LVNNAG +            +I  +   +N+N   
Sbjct: 64  ADVTTDAGQDEILSTTLGKFGKLDILVNNAGAAIPDSQSKTGTAQSIESYDATLNLNLRS 123

Query: 161 SVYTTRFAVPHLRYTKGKI-VVLSSAASWLTAPRMSFYNASKAALVLFFETLRVELGSD- 218
            +  T+ AVPHL  TKG+I  + S A+     P   +Y+ +KAA+  +     ++L    
Sbjct: 124 VIALTKKAVPHLSSTKGEIVNISSIASGLHATPDFPYYSIAKAAIDQYTRNTAIDLIQHG 183

Query: 219 VGVTIVTPGFIESELTQG 236
           + V  ++PG + +     
Sbjct: 184 IRVNSISPGLVATGFGSA 201

>d1yb1a_ c.2.1.2 (A:) 17-beta-hydroxysteroid dehydrogenase type XI {Human (Homo sapiens) [TaxId: 9606]} Length = 244

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: 17-beta-hydroxysteroid dehydrogenase type XI
species: Human (Homo sapiens) [TaxId: 9606]

 Score =  167 bits (423), Expect = 6e-52
 Identities = 59/199 (29%), Positives = 95/199 (47%), Gaps = 7/199 (3%)

Query: 43  EDVSGKVVIITGASSGIGEHLAYEYARRGACLALCARREKSLEEVADTAREIGSPDVITI 102
           + V+G++V+ITGA  GIG   AYE+A+  + L L    +  LEE A   + +G   V T 
Sbjct: 3   KSVTGEIVLITGAGHGIGRLTAYEFAKLKSKLVLWDINKHGLEETAAKCKGLG-AKVHTF 61

Query: 103 RADVSKVDDCRSLVEETMNHFGRLDHLVNNAGISSVALFEDIVNITDFKQIMNINFWGSV 162
             D S  +D  S  ++     G +  LVNNAG+   +           ++   +N     
Sbjct: 62  VVDCSNREDIYSSAKKVKAEIGDVSILVNNAGVVYTSDLFAT-QDPQIEKTFEVNVLAHF 120

Query: 163 YTTRFAVPHLRYTK-GKIVVLSSAASWLTAPRMSFYNASKAALVLFFETLRVELGSD--- 218
           +TT+  +P +     G IV ++SAA  ++ P +  Y +SK A V F +TL  EL +    
Sbjct: 121 WTTKAFLPAMTKNNHGHIVTVASAAGHVSVPFLLAYCSSKFAAVGFHKTLTDELAALQIT 180

Query: 219 -VGVTIVTPGFIESELTQG 236
            V  T + P F+ +   + 
Sbjct: 181 GVKTTCLCPNFVNTGFIKN 199

>d2d1ya1 c.2.1.2 (A:2-249) Hypothetical protein TTHA0369 {Thermus thermophilus [TaxId: 274]} Length = 248

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Hypothetical protein TTHA0369
species: Thermus thermophilus [TaxId: 274]

 Score =  163 bits (413), Expect = 2e-50
 Identities = 56/198 (28%), Positives = 91/198 (45%), Gaps = 10/198 (5%)

Query: 46  SGKVVIITGASSGIGEHLAYEYARRGACLALCARREKSLEEVADTAREIGSPDVITIRAD 105
           +GK V++TG + GIG  +A  +AR GA +ALC  R +  E     A  IG       + D
Sbjct: 4   AGKGVLVTGGARGIGRAIAQAFAREGALVALCDLRPEGKE----VAEAIG---GAFFQVD 56

Query: 106 VSKVDDCRSLVEETMNHFGRLDHLVNNAGISSVALFEDIVNITDFKQIMNINFWGSVYTT 165
           +    +    VEE     GR+D LVNNA I++      +  + ++++++ +N    ++ +
Sbjct: 57  LEDERERVRFVEEAAYALGRVDVLVNNAAIAAPGSALTV-RLPEWRRVLEVNLTAPMHLS 115

Query: 166 RFAVPHLRYTK-GKIVVLSSAASWLTAPRMSFYNASKAALVLFFETLRVELGSD-VGVTI 223
             A   +R    G IV ++S          + YNASK  LV    +L ++L    + V  
Sbjct: 116 ALAAREMRKVGGGAIVNVASVQGLFAEQENAAYNASKGGLVNLTRSLALDLAPLRIRVNA 175

Query: 224 VTPGFIESELTQGKFLTG 241
           V PG I +E         
Sbjct: 176 VAPGAIATEAVLEAIALS 193

>d2ew8a1 c.2.1.2 (A:3-249) (s)-1-phenylethanol dehydrogenase {Azoarcus sp. ebn1 [TaxId: 76114]} Length = 247

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: (s)-1-phenylethanol dehydrogenase
species: Azoarcus sp. ebn1 [TaxId: 76114]

 Score =  161 bits (410), Expect = 7e-50
 Identities = 58/201 (28%), Positives = 97/201 (48%), Gaps = 6/201 (2%)

Query: 46  SGKVVIITGASSGIGEHLAYEYARRGACLALCARREKSLEEVADTAREIGSPDVITIRAD 105
             K+ +ITG ++GIG  +A  +A  GA +A+         E     R +G   V+T++ D
Sbjct: 4   KDKLAVITGGANGIGRAIAERFAVEGADIAIADLVPA--PEAEAAIRNLG-RRVLTVKCD 60

Query: 106 VSKVDDCRSLVEETMNHFGRLDHLVNNAGISSVALFEDIVNITDFKQIMNINFWGSVYTT 165
           VS+  D  +  ++ ++ FGR D LVNNAGI  +  F+++     +K+   IN        
Sbjct: 61  VSQPGDVEAFGKQVISTFGRCDILVNNAGIYPLIPFDEL-TFEQWKKTFEINVDSGFLMA 119

Query: 166 RFAVPH-LRYTKGKIVVLSSAASWLTAPRMSFYNASKAALVLFFETLRVELGSD-VGVTI 223
           +  VP   R   G+I+ L+S   WL     + Y ++KAA + F   L  +LG D + V  
Sbjct: 120 KAFVPGMKRNGWGRIINLTSTTYWLKIEAYTHYISTKAANIGFTRALASDLGKDGITVNA 179

Query: 224 VTPGFIESELTQGKFLTGRRQ 244
           + P  + +  T+   L+    
Sbjct: 180 IAPSLVRTATTEASALSAMFD 200

>d1ydea1 c.2.1.2 (A:4-253) Retinal dehydrogenase/reductase 3 {Human (Homo sapiens) [TaxId: 9606]} Length = 250

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Retinal dehydrogenase/reductase 3
species: Human (Homo sapiens) [TaxId: 9606]

 Score =  158 bits (400), Expect = 2e-48
 Identities = 56/192 (29%), Positives = 98/192 (51%), Gaps = 6/192 (3%)

Query: 46  SGKVVIITGASSGIGEHLAYEYARRGACLALCARREKSLEEVADTAREIGSPDVITIRAD 105
           +GKVV++TG   GIG  +   +   GA + +C + E     +         P  + I  D
Sbjct: 5   AGKVVVVTGGGRGIGAGIVRAFVNSGARVVICDKDESGGRALEQEL-----PGAVFILCD 59

Query: 106 VSKVDDCRSLVEETMNHFGRLDHLVNNAGISSVALFEDIVNITDFKQIMNINFWGSVYTT 165
           V++ DD ++LV ET+  FGRLD +VNNAG        +  +   F+Q++ +N  G+   T
Sbjct: 60  VTQEDDVKTLVSETIRRFGRLDCVVNNAGHHPPPQRPEETSAQGFRQLLELNLLGTYTLT 119

Query: 166 RFAVPHLRYTKGKIVVLSSAASWLTAPRMSFYNASKAALVLFFETLRVELGSD-VGVTIV 224
           + A+P+LR ++G ++ +SS    +   +   Y A+K A+    + L ++     V V  +
Sbjct: 120 KLALPYLRKSQGNVINISSLVGAIGQAQAVPYVATKGAVTAMTKALALDESPYGVRVNCI 179

Query: 225 TPGFIESELTQG 236
           +PG I + L + 
Sbjct: 180 SPGNIWTPLWEE 191

>d1hxha_ c.2.1.2 (A:) 3beta/17beta hydroxysteroid dehydrogenase {Comamonas testosteroni [TaxId: 285]} Length = 253

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: 3beta/17beta hydroxysteroid dehydrogenase
species: Comamonas testosteroni [TaxId: 285]

 Score =  157 bits (397), Expect = 6e-48
 Identities = 53/202 (26%), Positives = 91/202 (45%), Gaps = 8/202 (3%)

Query: 46  SGKVVIITGASSGIGEHLAYEYARRGACLALCARREKSLEEVADTAREIGSPDVITIRAD 105
            GKV ++TG +SG+G  +       GA +A     E + +++A    E+G    + +R D
Sbjct: 5   QGKVALVTGGASGVGLEVVKLLLGEGAKVAFSDINEAAGQQLAA---ELGE-RSMFVRHD 60

Query: 106 VSKVDDCRSLVEETMNHFGRLDHLVNNAGISSVALFEDIVNITDFKQIMNINFWGSVYTT 165
           VS   D   ++       G L+ LVNNAGI      E    + DF +++ IN        
Sbjct: 61  VSSEADWTLVMAAVQRRLGTLNVLVNNAGILLPGDMETG-RLEDFSRLLKINTESVFIGC 119

Query: 166 RFAVPHLRYTKGKIVVLSSAASWLTAPRMSFYNASKAALVLFFETLRVEL---GSDVGVT 222
           +  +  ++ T G I+ ++S +SWL   + + Y+ASKAA+        +     G  + V 
Sbjct: 120 QQGIAAMKETGGSIINMASVSSWLPIEQYAGYSASKAAVSALTRAAALSCRKQGYAIRVN 179

Query: 223 IVTPGFIESELTQGKFLTGRRQ 244
            + P  I + + Q     G  +
Sbjct: 180 SIHPDGIYTPMMQASLPKGVSK 201

>d1xkqa_ c.2.1.2 (A:) Hypothetical protein R05D8.7 {Caenorhabditis elegans [TaxId: 6239]} Length = 272

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Hypothetical protein R05D8.7
species: Caenorhabditis elegans [TaxId: 6239]

 Score =  157 bits (398), Expect = 7e-48
 Identities = 61/204 (29%), Positives = 99/204 (48%), Gaps = 7/204 (3%)

Query: 46  SGKVVIITGASSGIGEHLAYEYARRGACLALCARREKSLEEVADTAREIG--SPDVITIR 103
           S K VIITG+S+GIG   A  +A+ GA + +  R  + LEE      + G     V ++ 
Sbjct: 4   SNKTVIITGSSNGIGRTTAILFAQEGANVTITGRSSERLEETRQIILKSGVSEKQVNSVV 63

Query: 104 ADVSKVDDCRSLVEETMNHFGRLDHLVNNAGISSVALFEDIV---NITDFKQIMNINFWG 160
           ADV+  D    ++  T+  FG++D LVNNAG +    F        I  + + + +N   
Sbjct: 64  ADVTTEDGQDQIINSTLKQFGKIDVLVNNAGAAIPDAFGTTGTDQGIDIYHKTLKLNLQA 123

Query: 161 SVYTTRFAVPHLRYTKGKIVVLS-SAASWLTAPRMSFYNASKAALVLFFETLRVELGSD- 218
            +  T+   PHL  +KG+IV +S   A     P   +Y  +KAAL  +  +  ++L    
Sbjct: 124 VIEMTKKVKPHLVASKGEIVNVSSIVAGPQAQPDFLYYAIAKAALDQYTRSTAIDLAKFG 183

Query: 219 VGVTIVTPGFIESELTQGKFLTGR 242
           + V  V+PG +E+  T    +  +
Sbjct: 184 IRVNSVSPGMVETGFTNAMGMPDQ 207

>d1sbya1 c.2.1.2 (A:1-254) Drosophila alcohol dehydrogenase {Fly (Drosophila lebanonensis) [TaxId: 7225]} Length = 254

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Drosophila alcohol dehydrogenase
species: Fly (Drosophila lebanonensis) [TaxId: 7225]

 Score =  155 bits (393), Expect = 2e-47
 Identities = 45/201 (22%), Positives = 78/201 (38%), Gaps = 15/201 (7%)

Query: 44  DVSGKVVIITGASSGIGEHLAYEYARRGACLALCARREKSLEEVADTAREIGSPDVITIR 103
           D++ K VI   A  GIG   + E  +R     +   R ++   +A+        ++    
Sbjct: 2   DLTNKNVIFVAALGGIGLDTSRELVKRNLKNFVILDRVENPTALAELKAINPKVNITFHT 61

Query: 104 ADVS-KVDDCRSLVEETMNHFGRLDHLVNNAGISSVALFEDIVNITDFKQIMNINFWGSV 162
            DV+  V + + L+++  +    +D L+N AGI               ++ + INF G V
Sbjct: 62  YDVTVPVAESKKLLKKIFDQLKTVDILINGAGILDDH---------QIERTIAINFTGLV 112

Query: 163 YTTRFAVPHLR----YTKGKIVVLSSAASWLTAPRMSFYNASKAALVLFFETLRVELGSD 218
            TT   +           G I  + S   +    ++  Y+ASKAA+V F  +L       
Sbjct: 113 NTTTAILDFWDKRKGGPGGIIANICSVTGFNAIHQVPVYSASKAAVVSFTNSLAKLAPIT 172

Query: 219 -VGVTIVTPGFIESELTQGKF 238
            V    + PG   + L     
Sbjct: 173 GVTAYSINPGITRTPLVHTFN 193

>d1xu9a_ c.2.1.2 (A:) 11-beta-hydroxysteroid dehydrogenase 1 {Human (Homo sapiens) [TaxId: 9606]} Length = 269

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: 11-beta-hydroxysteroid dehydrogenase 1
species: Human (Homo sapiens) [TaxId: 9606]

 Score =  154 bits (390), Expect = 8e-47
 Identities = 63/202 (31%), Positives = 101/202 (50%), Gaps = 5/202 (2%)

Query: 38  NSIFSEDV-SGKVVIITGASSGIGEHLAYEYARRGACLALCARREKSLEEVADTAREIGS 96
           N  F  ++  GK VI+TGAS GIG  +AY  A+ GA + + AR +++L++V     E+G+
Sbjct: 4   NEEFRPEMLQGKKVIVTGASKGIGREMAYHLAKMGAHVVVTARSKETLQKVVSHCLELGA 63

Query: 97  PDVITIRADVSKVDDCRSLVEETMNHFGRLDHLVNNAGISSVALFEDIVNITDFKQIMNI 156
                I   +  +      V +     G LD L+ N   ++        +I   ++ M +
Sbjct: 64  ASAHYIAGTMEDMTFAEQFVAQAGKLMGGLDMLILNHITNTSLNLFHD-DIHHVRKSMEV 122

Query: 157 NFWGSVYTTRFAVPHLRYTKGKIVVLSSAASWLTAPRMSFYNASKAALVLFFETLRVELG 216
           NF   V  T  A+P L+ + G IVV+SS A  +  P ++ Y+ASK AL  FF ++R E  
Sbjct: 123 NFLSYVVLTVAALPMLKQSNGSIVVVSSLAGKVAYPMVAAYSASKFALDGFFSSIRKEYS 182

Query: 217 SD---VGVTIVTPGFIESELTQ 235
                V +T+   G I++E   
Sbjct: 183 VSRVNVSITLCVLGLIDTETAM 204

>d1bdba_ c.2.1.2 (A:) Cis-biphenyl-2,3-dihydrodiol-2,3-dehydrogenase {Pseudomonas sp., lb400 [TaxId: 306]} Length = 276

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Cis-biphenyl-2,3-dihydrodiol-2,3-dehydrogenase
species: Pseudomonas sp., lb400 [TaxId: 306]

 Score =  152 bits (385), Expect = 6e-46
 Identities = 52/193 (26%), Positives = 89/193 (46%), Gaps = 8/193 (4%)

Query: 46  SGKVVIITGASSGIGEHLAYEYARRGACLALCARREKSLEEVADTAREIGSPDVITIRAD 105
            G+ V+ITG +SG+G  L   +   GA +A+  +     E +A+   + G  +V+ I  D
Sbjct: 4   KGEAVLITGGASGLGRALVDRFVAEGAKVAVLDKSA---ERLAELETDHGD-NVLGIVGD 59

Query: 106 VSKVDDCRSLVEETMNHFGRLDHLVNNAGISSVALFEDIVNIT----DFKQIMNINFWGS 161
           V  ++D +      +  FG++D L+ NAGI   +     +        F ++ +IN  G 
Sbjct: 60  VRSLEDQKQAASRCVARFGKIDTLIPNAGIWDYSTALVDLPEESLDAAFDEVFHINVKGY 119

Query: 162 VYTTRFAVPHLRYTKGKIVVLSSAASWLTAPRMSFYNASKAALVLFFETLRVELGSDVGV 221
           ++  +  +P L  ++G ++   S A +        Y A+K A+V     L  EL   V V
Sbjct: 120 IHAVKACLPALVASRGNVIFTISNAGFYPNGGGPLYTAAKHAIVGLVRELAFELAPYVRV 179

Query: 222 TIVTPGFIESELT 234
             V  G I S+L 
Sbjct: 180 NGVGSGGINSDLR 192

>d2ae2a_ c.2.1.2 (A:) Tropinone reductase {Jimsonweed (Datura stramonium), II [TaxId: 4076]} Length = 259

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Tropinone reductase
species: Jimsonweed (Datura stramonium), II [TaxId: 4076]

 Score =  151 bits (382), Expect = 1e-45
 Identities = 60/198 (30%), Positives = 94/198 (47%), Gaps = 5/198 (2%)

Query: 44  DVSGKVVIITGASSGIGEHLAYEYARRGACLALCARREKSLEEVADTAREIGSPDVITIR 103
           ++ G   ++TG S GIG  +  E A  GA +  C+R +K L +     R  G        
Sbjct: 5   NLEGCTALVTGGSRGIGYGIVEELASLGASVYTCSRNQKELNDCLTQWRSKGFKV-EASV 63

Query: 104 ADVSKVDDCRSLVEETMNHF-GRLDHLVNNAGISSVALFEDIVNITDFKQIMNINFWGSV 162
            D+S   + + L+    NHF G+L+ LVNNAGI      +D   + D+  IM+INF  + 
Sbjct: 64  CDLSSRSERQELMNTVANHFHGKLNILVNNAGIVIYKEAKDY-TVEDYSLIMSINFEAAY 122

Query: 163 YTTRFAVPHLRYTKGK-IVVLSSAASWLTAPRMSFYNASKAALVLFFETLRVELGSD-VG 220
           + +  A P L+ ++   +V +SS +  L  P  + Y A+K A+      L  E   D + 
Sbjct: 123 HLSVLAHPFLKASERGNVVFISSVSGALAVPYEAVYGATKGAMDQLTRCLAFEWAKDNIR 182

Query: 221 VTIVTPGFIESELTQGKF 238
           V  V PG I + L +   
Sbjct: 183 VNGVGPGVIATSLVEMTI 200

>d2gdza1 c.2.1.2 (A:3-256) 15-hydroxyprostaglandin dehydrogenase, PGDH {Human (Homo sapiens) [TaxId: 9606]} Length = 254

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: 15-hydroxyprostaglandin dehydrogenase, PGDH
species: Human (Homo sapiens) [TaxId: 9606]

 Score =  150 bits (380), Expect = 2e-45
 Identities = 54/200 (27%), Positives = 92/200 (46%), Gaps = 17/200 (8%)

Query: 45  VSGKVVIITGASSGIGEHLAYEYARRGACLALCARREKSLEEVADTAREIGSP-DVITIR 103
           V+GKV ++TGA+ GIG   A     +GA +AL     ++  +      E   P   + I+
Sbjct: 1   VNGKVALVTGAAQGIGRAFAEALLLKGAKVALVDWNLEAGVQCKAALHEQFEPQKTLFIQ 60

Query: 104 ADVSKVDDCRSLVEETMNHFGRLDHLVNNAGISSVALFEDIVNITDFKQIMNINFWGSVY 163
            DV+     R    + ++HFGRLD LVNNAG         + N  ++++ + IN    + 
Sbjct: 61  CDVADQQQLRDTFRKVVDHFGRLDILVNNAG---------VNNEKNWEKTLQINLVSVIS 111

Query: 164 TTRFAVPHLRYTK----GKIVVLSSAASWLTAPRMSFYNASKAALVLFFET--LRVELGS 217
            T   + ++        G I+ +SS A  +   +   Y ASK  +V F  +  L   L +
Sbjct: 112 GTYLGLDYMSKQNGGEGGIIINMSSLAGLMPVAQQPVYCASKHGIVGFTRSAALAANLMN 171

Query: 218 D-VGVTIVTPGFIESELTQG 236
             V +  + PGF+ + + + 
Sbjct: 172 SGVRLNAICPGFVNTAILES 191

>d1xhla_ c.2.1.2 (A:) Hypothetical protein F25D1.5 {Caenorhabditis elegans [TaxId: 6239]} Length = 274

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Hypothetical protein F25D1.5
species: Caenorhabditis elegans [TaxId: 6239]

 Score =  148 bits (374), Expect = 3e-44
 Identities = 60/205 (29%), Positives = 95/205 (46%), Gaps = 5/205 (2%)

Query: 46  SGKVVIITGASSGIGEHLAYEYARRGACLALCARREKSLEEVADTAREIGSP--DVITIR 103
           SGK VIITG+S+GIG   A  +A+ GA + +  R E  LEE      + G P   +  + 
Sbjct: 3   SGKSVIITGSSNGIGRSAAVIFAKEGAQVTITGRNEDRLEETKQQILKAGVPAEKINAVV 62

Query: 104 ADVSKVDDCRSLVEETMNHFGRLDHLVNNAGISSVALFEDI-VNITDFKQIMNINFWGSV 162
           ADV++      ++  T+  FG++D LVNNAG +      +    +  +++   +NF   +
Sbjct: 63  ADVTEASGQDDIINTTLAKFGKIDILVNNAGANLADGTANTDQPVELYQKTFKLNFQAVI 122

Query: 163 YTTRFAVPHLRYTKGKI-VVLSSAASWLTAPRMSFYNASKAALVLFFETLRVELGSD-VG 220
             T+    HL  TKG+I  V S  A         +Y  +KAAL  +     ++L    V 
Sbjct: 123 EMTQKTKEHLIKTKGEIVNVSSIVAGPQAHSGYPYYACAKAALDQYTRCTAIDLIQHGVR 182

Query: 221 VTIVTPGFIESELTQGKFLTGRRQN 245
           V  V+PG + +       L     +
Sbjct: 183 VNSVSPGAVATGFMGAMGLPETASD 207

>d1zk4a1 c.2.1.2 (A:1-251) R-specific alcohol dehydrogenase {Lactobacillus brevis [TaxId: 1580]} Length = 251

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: R-specific alcohol dehydrogenase
species: Lactobacillus brevis [TaxId: 1580]

 Score =  146 bits (370), Expect = 5e-44
 Identities = 56/197 (28%), Positives = 96/197 (48%), Gaps = 10/197 (5%)

Query: 46  SGKVVIITGASSGIGEHLAYEYARRGACLALCARREKSLEEVADTAREIGSPD-VITIRA 104
            GKV IITG + GIG  +A ++   GA + +  R     E+ A     +G+PD +   + 
Sbjct: 5   DGKVAIITGGTLGIGLAIATKFVEEGAKVMITGRHSDVGEKAAK---SVGTPDQIQFFQH 61

Query: 105 DVSKVDDCRSLVEETMNHFGRLDHLVNNAGISSVALFEDIVNITDFKQIMNINFWGSVYT 164
           D S  D    L + T   FG +  LVNNAGI+     E+     ++++++ +N  G  + 
Sbjct: 62  DSSDEDGWTKLFDATEKAFGPVSTLVNNAGIAVNKSVEET-TTAEWRKLLAVNLDGVFFG 120

Query: 165 TRFAVPHLRYTK--GKIVVLSSAASWLTAPRMSFYNASKAALVLFFETLRVEL---GSDV 219
           TR  +  ++       I+ +SS   ++  P +  YNASK A+ +  ++  ++      DV
Sbjct: 121 TRLGIQRMKNKGLGASIINMSSIEGFVGDPSLGAYNASKGAVRIMSKSAALDCALKDYDV 180

Query: 220 GVTIVTPGFIESELTQG 236
            V  V PG+I++ L   
Sbjct: 181 RVNTVHPGYIKTPLVDD 197

>d1hdca_ c.2.1.2 (A:) 3-alpha,20-beta-hydroxysteroid dehydrogenase {Streptomyces hydrogenans [TaxId: 1905]} Length = 254

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: 3-alpha,20-beta-hydroxysteroid dehydrogenase
species: Streptomyces hydrogenans [TaxId: 1905]

 Score =  146 bits (370), Expect = 6e-44
 Identities = 66/194 (34%), Positives = 98/194 (50%), Gaps = 7/194 (3%)

Query: 44  DVSGKVVIITGASSGIGEHLAYEYARRGACLALCARREKSLEEVADTAREIGSPDVITIR 103
           D+SGK VIITG + G+G   A +    GA + L    +   EE A TARE+G        
Sbjct: 2   DLSGKTVIITGGARGLGAEAARQAVAAGARVVLADVLD---EEGAATARELGD-AARYQH 57

Query: 104 ADVSKVDDCRSLVEETMNHFGRLDHLVNNAGISSVALFEDIVNITDFKQIMNINFWGSVY 163
            DV+  +D + +V      FG +D LVNNAGIS+   F +  ++  F++++ IN  G   
Sbjct: 58  LDVTIEEDWQRVVAYAREEFGSVDGLVNNAGISTGM-FLETESVERFRKVVEINLTGVFI 116

Query: 164 TTRFAVPHLRYTK-GKIVVLSSAASWLTAPRMSFYNASKAALVLFFETLRVELGSD-VGV 221
             +  +P ++    G IV +SSAA  +     S Y ASK  +    +   VELG+D + V
Sbjct: 117 GMKTVIPAMKDAGGGSIVNISSAAGLMGLALTSSYGASKWGVRGLSKLAAVELGTDRIRV 176

Query: 222 TIVTPGFIESELTQ 235
             V PG   + +T 
Sbjct: 177 NSVHPGMTYTPMTA 190

>d1vl8a_ c.2.1.2 (A:) Gluconate 5-dehydrogenase {Thermotoga maritima [TaxId: 2336]} Length = 251

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Gluconate 5-dehydrogenase
species: Thermotoga maritima [TaxId: 2336]

 Score =  146 bits (370), Expect = 6e-44
 Identities = 54/198 (27%), Positives = 98/198 (49%), Gaps = 4/198 (2%)

Query: 44  DVSGKVVIITGASSGIGEHLAYEYARRGACLALCARREKSLEEVADTAREIGSPDVITIR 103
           D+ G+V ++TG S G+G  +A   A  G  + + +R  +   E A    E    + +  R
Sbjct: 2   DLRGRVALVTGGSRGLGFGIAQGLAEAGCSVVVASRNLEEASEAAQKLTEKYGVETMAFR 61

Query: 104 ADVSKVDDCRSLVEETMNHFGRLDHLVNNAGISSVALFEDIVNITDFKQIMNINFWGSVY 163
            DVS  ++ + L+E     FG+LD +VN AGI+     E+   + +F+Q++ +N +G+ Y
Sbjct: 62  CDVSNYEEVKKLLEAVKEKFGKLDTVVNAAGINRRHPAEEF-PLDEFRQVIEVNLFGTYY 120

Query: 164 TTRFAVPHLRYTKGKIVVLSSAASWLTA--PRMSFYNASKAALVLFFETLRVELGSD-VG 220
             R A   LR +    ++   + +      P +S Y ASK  +    + L  E G   + 
Sbjct: 121 VCREAFSLLRESDNPSIINIGSLTVEEVTMPNISAYAASKGGVASLTKALAKEWGRYGIR 180

Query: 221 VTIVTPGFIESELTQGKF 238
           V ++ PG+  +++T+  F
Sbjct: 181 VNVIAPGWYRTKMTEAVF 198

>d1xq1a_ c.2.1.2 (A:) Tropinone reductase {Thale cress (Arabidopsis thaliana) [TaxId: 3702]} Length = 259

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Tropinone reductase
species: Thale cress (Arabidopsis thaliana) [TaxId: 3702]

 Score =  144 bits (365), Expect = 4e-43
 Identities = 56/204 (27%), Positives = 91/204 (44%), Gaps = 5/204 (2%)

Query: 44  DVSGKVVIITGASSGIGEHLAYEYARRGACLALCARREKSLEEVADTAREIGSPDVITIR 103
            +  K V++TG + GIG  +  E+A  GA +  CAR E  L E     ++ G   V    
Sbjct: 5   SLKAKTVLVTGGTKGIGHAIVEEFAGFGAVIHTCARNEYELNECLSKWQKKG-FQVTGSV 63

Query: 104 ADVSKVDDCRSLVEETMNHF-GRLDHLVNNAGISSVALFEDIVNITDFKQIMNINFWGSV 162
            D S   +   L++   + F G+LD L+NN G        D     DF   ++ N   + 
Sbjct: 64  CDASLRPEREKLMQTVSSMFGGKLDILINNLGAIRSKPTLDY-TAEDFSFHISTNLESAY 122

Query: 163 YTTRFAVPHLRYTKGK-IVVLSSAASWLTAPRMSFYNASKAALVLFFETLRVELGSD-VG 220
           + ++ A P L+ +    I+ +SS A  ++A   S Y+A+K AL      L  E  SD + 
Sbjct: 123 HLSQLAHPLLKASGCGNIIFMSSIAGVVSASVGSIYSATKGALNQLARNLACEWASDGIR 182

Query: 221 VTIVTPGFIESELTQGKFLTGRRQ 244
              V P  I + L +  +    ++
Sbjct: 183 ANAVAPAVIATPLAEAVYDDEFKK 206

>d1cyda_ c.2.1.2 (A:) Carbonyl reductase {Mouse (Mus musculus) [TaxId: 10090]} Length = 242

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Carbonyl reductase
species: Mouse (Mus musculus) [TaxId: 10090]

 Score =  143 bits (362), Expect = 6e-43
 Identities = 44/195 (22%), Positives = 82/195 (42%), Gaps = 13/195 (6%)

Query: 44  DVSGKVVIITGASSGIGEHLAYEYARRGACLALCARREKSLEEVADTAREIGSPDVITIR 103
           + SG   ++TGA  GIG          GA +    R    L  +A        P +  + 
Sbjct: 2   NFSGLRALVTGAGKGIGRDTVKALHASGAKVVAVTRTNSDLVSLAKEC-----PGIEPVC 56

Query: 104 ADVSKVDDCRSLVEETMNHFGRLDHLVNNAGISSVALFEDIVNITDFKQIMNINFWGSVY 163
            D+   D      E+ +   G +D LVNNA +  +  F ++     F +  ++N      
Sbjct: 57  VDLGDWDA----TEKALGGIGPVDLLVNNAALVIMQPFLEV-TKEAFDRSFSVNLRSVFQ 111

Query: 164 TTRFAVP--HLRYTKGKIVVLSSAASWLTAPRMSFYNASKAALVLFFETLRVELGSD-VG 220
            ++        R   G IV +SS  + +T P +  Y+++K A+ +  + + +ELG   + 
Sbjct: 112 VSQMVARDMINRGVPGSIVNVSSMVAHVTFPNLITYSSTKGAMTMLTKAMAMELGPHKIR 171

Query: 221 VTIVTPGFIESELTQ 235
           V  V P  + +++ +
Sbjct: 172 VNSVNPTVVLTDMGK 186

>d1gz6a_ c.2.1.2 (A:) (3R)-hydroxyacyl-CoA dehydrogenase domain of estradiol 17 beta-Dehydrogenase 4 {Rat (Rattus norvegicus) [TaxId: 10116]} Length = 302

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: (3R)-hydroxyacyl-CoA dehydrogenase domain of estradiol 17 beta-Dehydrogenase 4
species: Rat (Rattus norvegicus) [TaxId: 10116]

 Score =  145 bits (367), Expect = 7e-43
 Identities = 52/201 (25%), Positives = 85/201 (42%), Gaps = 10/201 (4%)

Query: 44  DVSGKVVIITGASSGIGEHLAYEYARRGACLALCARRE------KSLEEVADTAREIGSP 97
              G+VV++TGA  G+G   A  +A RGA + +           K          EI   
Sbjct: 4   RFDGRVVLVTGAGGGLGRAYALAFAERGALVVVNDLGGDFKGVGKGSSAADKVVEEIRR- 62

Query: 98  DVITIRADVSKVDDCRSLVEETMNHFGRLDHLVNNAGISSVALFEDIVNITDFKQIMNIN 157
                 A+   V+    LV+  ++ FGR+D +VNNAGI     F  I +  D+  I  ++
Sbjct: 63  RGGKAVANYDSVEAGEKLVKTALDTFGRIDVVVNNAGILRDRSFSRI-SDEDWDIIQRVH 121

Query: 158 FWGSVYTTRFAVPHLRYTK-GKIVVLSSAASWLTAPRMSFYNASKAALVLFFETLRVELG 216
             GS   TR A  H++    G+I++ +SA+        + Y+A+K  L+    TL +E  
Sbjct: 122 LRGSFQVTRAAWDHMKKQNYGRIIMTASASGIYGNFGQANYSAAKLGLLGLANTLVIEGR 181

Query: 217 SD-VGVTIVTPGFIESELTQG 236
            + +    + P          
Sbjct: 182 KNNIHCNTIAPNAGSRMTETV 202

>d1iy8a_ c.2.1.2 (A:) Levodione reductase {Corynebacterium aquaticum [TaxId: 144185]} Length = 258

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Levodione reductase
species: Corynebacterium aquaticum [TaxId: 144185]

 Score =  142 bits (358), Expect = 4e-42
 Identities = 52/196 (26%), Positives = 79/196 (40%), Gaps = 3/196 (1%)

Query: 46  SGKVVIITGASSGIGEHLAYEYARRGACLALCARREKSLEEVADTAREIG-SPDVITIRA 104
           + +VV+ITG  SG+G   A   A  GA L+L     + LE       E     +V+T  A
Sbjct: 3   TDRVVLITGGGSGLGRATAVRLAAEGAKLSLVDVSSEGLEASKAAVLETAPDAEVLTTVA 62

Query: 105 DVSKVDDCRSLVEETMNHFGRLDHLVNNAGISSVALFEDIVNITDFKQIMNINFWGSVY- 163
           DVS      + V  T   FGR+D   NNAGI       +     +F ++++IN  G    
Sbjct: 63  DVSDEAQVEAYVTATTERFGRIDGFFNNAGIEGKQNPTESFTAAEFDKVVSINLRGVFLG 122

Query: 164 TTRFAVPHLRYTKGKIVVLSSAASWLTAPRMSFYNASKAALVLFFETLRVELGSD-VGVT 222
             +          G +V  +S          S Y A+K  +V       VE G   + + 
Sbjct: 123 LEKVLKIMREQGSGMVVNTASVGGIRGIGNQSGYAAAKHGVVGLTRNSAVEYGRYGIRIN 182

Query: 223 IVTPGFIESELTQGKF 238
            + PG I + + +   
Sbjct: 183 AIAPGAIWTPMVENSM 198

>d1ja9a_ c.2.1.2 (A:) 1,3,6,8-tetrahydroxynaphthalene reductase {Rice blast fungus (Magnaporthe grisea) [TaxId: 148305]} Length = 259

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: 1,3,6,8-tetrahydroxynaphthalene reductase
species: Rice blast fungus (Magnaporthe grisea) [TaxId: 148305]

 Score =  141 bits (356), Expect = 8e-42
 Identities = 56/192 (29%), Positives = 98/192 (51%), Gaps = 4/192 (2%)

Query: 46  SGKVVIITGASSGIGEHLAYEYARRGACLALCARR-EKSLEEVADTAREIGSPDVITIRA 104
           +GKV + TGA  GIG  +A E  RRGA + +      K+ EEV    +++G    + I+A
Sbjct: 5   AGKVALTTGAGRGIGRGIAIELGRRGASVVVNYGSSSKAAEEVVAELKKLG-AQGVAIQA 63

Query: 105 DVSKVDDCRSLVEETMNHFGRLDHLVNNAGISSVALFEDIVNITDFKQIMNINFWGSVYT 164
           D+SK  +  +L ++ ++HFG LD +++N+G+       ++     F ++ N+N  G  + 
Sbjct: 64  DISKPSEVVALFDKAVSHFGGLDFVMSNSGMEVWCDELEV-TQELFDKVFNLNTRGQFFV 122

Query: 165 TRFAVPHLRYTKGKIVVLSSAASWLTAPRMSFYNASKAALVLFFETLRVELGSD-VGVTI 223
            +  + H R     I+  S AA     P  + Y  SKAA+  F     V+ G+  V V  
Sbjct: 123 AQQGLKHCRRGGRIILTSSIAAVMTGIPNHALYAGSKAAVEGFCRAFAVDCGAKGVTVNC 182

Query: 224 VTPGFIESELTQ 235
           + PG +++++  
Sbjct: 183 IAPGGVKTDMFD 194

>d1pr9a_ c.2.1.2 (A:) Carbonyl reductase {Human (Homo sapiens) [TaxId: 9606]} Length = 244

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Carbonyl reductase
species: Human (Homo sapiens) [TaxId: 9606]

 Score =  140 bits (354), Expect = 1e-41
 Identities = 45/196 (22%), Positives = 82/196 (41%), Gaps = 13/196 (6%)

Query: 46  SGKVVIITGASSGIGEHLAYEYARRGACLALCARREKSLEEVADTAREIGSPDVITIRAD 105
           +G+ V++TGA  GIG          GA +   +R +  L+ +         P +  +  D
Sbjct: 6   AGRRVLVTGAGKGIGRGTVQALHATGARVVAVSRTQADLDSLVREC-----PGIEPVCVD 60

Query: 106 VSKVDDCRSLVEETMNHFGRLDHLVNNAGISSVALFEDIVNITDFKQIMNINFWGSVYTT 165
           +   +      E  +   G +D LVNNA ++ +  F ++     F +   +N    +  +
Sbjct: 61  LGDWEA----TERALGSVGPVDLLVNNAAVALLQPFLEV-TKEAFDRSFEVNLRAVIQVS 115

Query: 166 RFAVPHL--RYTKGKIVVLSSAASWLTAPRMSFYNASKAALVLFFETLRVELGSD-VGVT 222
           +     L  R   G IV +SS  S       S Y ++K AL +  + + +ELG   + V 
Sbjct: 116 QIVARGLIARGVPGAIVNVSSQCSQRAVTNHSVYCSTKGALDMLTKVMALELGPHKIRVN 175

Query: 223 IVTPGFIESELTQGKF 238
            V P  + + + Q  +
Sbjct: 176 AVNPTVVMTSMGQATW 191

>d1ulsa_ c.2.1.2 (A:) beta-keto acyl carrier protein reductase {Thermus thermophilus [TaxId: 274]} Length = 242

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: beta-keto acyl carrier protein reductase
species: Thermus thermophilus [TaxId: 274]

 Score =  140 bits (353), Expect = 2e-41
 Identities = 57/192 (29%), Positives = 90/192 (46%), Gaps = 8/192 (4%)

Query: 46  SGKVVIITGASSGIGEHLAYEYARRGACLALCARREKSLEEVADTAREIGSPDVITIRAD 105
             K V+ITGA+ GIG      +A+ GA L  C   E  L E A+    +G      +  D
Sbjct: 4   KDKAVLITGAAHGIGRATLELFAKEGARLVACDIEEGPLREAAE---AVG---AHPVVMD 57

Query: 106 VSKVDDCRSLVEETMNHFGRLDHLVNNAGISSVALFEDIVNITDFKQIMNINFWGSVYTT 165
           V+          E + H GRLD +V+ AGI+       +  + D++ ++ +N  GS    
Sbjct: 58  VADPASVERGFAEALAHLGRLDGVVHYAGITRDNFHWKM-PLEDWELVLRVNLTGSFLVA 116

Query: 166 RFAVPHLRYTKGKIVVLSSAASWLTAPRMSFYNASKAALVLFFETLRVELGSD-VGVTIV 224
           + A   +R      +VL+++  +L     + Y AS A +V    TL +ELG   + V  +
Sbjct: 117 KAASEAMREKNPGSIVLTASRVYLGNLGQANYAASMAGVVGLTRTLALELGRWGIRVNTL 176

Query: 225 TPGFIESELTQG 236
            PGFIE+ +T  
Sbjct: 177 APGFIETRMTAK 188

>d2bgka1 c.2.1.2 (A:11-278) Rhizome secoisolariciresinol dehydrogenase {Mayapple (Podophyllum peltatum) [TaxId: 35933]} Length = 268

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Rhizome secoisolariciresinol dehydrogenase
species: Mayapple (Podophyllum peltatum) [TaxId: 35933]

 Score =  139 bits (351), Expect = 5e-41
 Identities = 60/198 (30%), Positives = 97/198 (48%), Gaps = 8/198 (4%)

Query: 46  SGKVVIITGASSGIGEHLAYEYARRGACLALCARREKSLEEVADTAREIGSPDVIT-IRA 104
             KV IITG + GIGE  A  + R GA + +    +   ++V +    IGSPDVI+ +  
Sbjct: 5   QDKVAIITGGAGGIGETTAKLFVRYGAKVVIADIADDHGQKVCN---NIGSPDVISFVHC 61

Query: 105 DVSKVDDCRSLVEETMNHFGRLDHLVNNAGISSVALFEDI-VNITDFKQIMNINFWGSVY 163
           DV+K +D R+LV+ T+   G+LD +  N G+ S   +  +     DFK++M+IN +G+  
Sbjct: 62  DVTKDEDVRNLVDTTIAKHGKLDIMFGNVGVLSTTPYSILEAGNEDFKRVMDINVYGAFL 121

Query: 164 TTRFAVPHLRYTK--GKIVVLSSAASWLTAPRMSFYNASKAALVLFFETLRVELGSD-VG 220
             + A   +   K    +   S ++          Y A+K A++    +L  ELG   + 
Sbjct: 122 VAKHAARVMIPAKKGSIVFTASISSFTAGEGVSHVYTATKHAVLGLTTSLCTELGEYGIR 181

Query: 221 VTIVTPGFIESELTQGKF 238
           V  V+P  + S L    F
Sbjct: 182 VNCVSPYIVASPLLTDVF 199

>d1h5qa_ c.2.1.2 (A:) Mannitol dehydrogenase {Mushroom (Agaricus bisporus) [TaxId: 5341]} Length = 260

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Mannitol dehydrogenase
species: Mushroom (Agaricus bisporus) [TaxId: 5341]

 Score =  139 bits (350), Expect = 6e-41
 Identities = 53/206 (25%), Positives = 86/206 (41%), Gaps = 11/206 (5%)

Query: 41  FSEDVSGKVVIITGASSGIGEHLAYEYARRGACLALCARREKSLEEVADTAREIGSPDVI 100
           F+     K +I+TG + GIG       A  GA +A+  R      EV +   +       
Sbjct: 3   FTISFVNKTIIVTGGNRGIGLAFTRAVAAAGANVAVIYRSAADAVEVTEKVGKEFGVKTK 62

Query: 101 TIRADVSKVDDCRSLVEETMNHFGRLDHLVNNAGISSVALFEDIVNITDFKQIMNINFWG 160
             + DVS  D     +++     G +  L+ NAG+S V    ++    DF  + ++N +G
Sbjct: 63  AYQCDVSNTDIVTKTIQQIDADLGPISGLIANAGVSVVKPATEL-THEDFAFVYDVNVFG 121

Query: 161 SVYTTRFAVPHLRYT--KGKIVVLS-------SAASWLTAPRMSFYNASKAALVLFFETL 211
              T R           KG IVV S       + +S   +    FYN+SKAA     + L
Sbjct: 122 VFNTCRAVAKLWLQKQQKGSIVVTSSMSSQIINQSSLNGSLTQVFYNSSKAACSNLVKGL 181

Query: 212 RVELGSD-VGVTIVTPGFIESELTQG 236
             E  S  + V  ++PG++ ++ T  
Sbjct: 182 AAEWASAGIRVNALSPGYVNTDQTAH 207

>d1yxma1 c.2.1.2 (A:7-303) Peroxisomal trans 2-enoyl CoA reductase {Human (Homo sapiens) [TaxId: 9606]} Length = 297

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Peroxisomal trans 2-enoyl CoA reductase
species: Human (Homo sapiens) [TaxId: 9606]

 Score =  137 bits (347), Expect = 5e-40
 Identities = 45/198 (22%), Positives = 91/198 (45%), Gaps = 6/198 (3%)

Query: 46  SGKVVIITGASSGIGEHLAYEYARRGACLALCARREKSLEEVADTAREIGSP----DVIT 101
            G+V I+TG ++GIG+ +  E    G+ + + +R+ + L+  AD  +    P     VI 
Sbjct: 11  QGQVAIVTGGATGIGKAIVKELLELGSNVVIASRKLERLKSAADELQANLPPTKQARVIP 70

Query: 102 IRADVSKVDDCRSLVEETMNHFGRLDHLVNNAGISSVALFEDIVNITDFKQIMNINFWGS 161
           I+ ++   ++  +LV+ T++ FG+++ LVNN G   ++  E I +   +  ++  N  G+
Sbjct: 71  IQCNIRNEEEVNNLVKSTLDTFGKINFLVNNGGGQFLSPAEHI-SSKGWHAVLETNLTGT 129

Query: 162 VYTTRFAVPHLRYTKGKIVVLSSAASWLTAPRMSFYNASKAALVLFFETLRVELGSD-VG 220
            Y  +          G  +V     +    P      A++A +    ++L +E     + 
Sbjct: 130 FYMCKAVYSSWMKEHGGSIVNIIVPTKAGFPLAVHSGAARAGVYNLTKSLALEWACSGIR 189

Query: 221 VTIVTPGFIESELTQGKF 238
           +  V PG I S+     +
Sbjct: 190 INCVAPGVIYSQTAVENY 207

>d2bd0a1 c.2.1.2 (A:2-241) Bacterial sepiapterin reductase {Chlorobium tepidum [TaxId: 1097]} Length = 240

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Bacterial sepiapterin reductase
species: Chlorobium tepidum [TaxId: 1097]

 Score =  136 bits (342), Expect = 5e-40
 Identities = 58/198 (29%), Positives = 87/198 (43%), Gaps = 11/198 (5%)

Query: 48  KVVIITGASSGIGEHLAYEYARRGA-------CLALCARREKSLEEVADTAREIGSPDVI 100
            +++ITGA  GIG  +A E+AR           L L +R    LE+++   R  G     
Sbjct: 2   HILLITGAGKGIGRAIALEFARAARHHPDFEPVLVLSSRTAADLEKISLECRAEG-ALTD 60

Query: 101 TIRADVSKVDDCRSLVEETMNHFGRLDHLVNNAGISSVALFEDIVNITDFKQIMNINFWG 160
           TI AD+S + D R L    +  +G +D LVNNAG+       D+    DF   MN N  G
Sbjct: 61  TITADISDMADVRRLTTHIVERYGHIDCLVNNAGVGRFGALSDL-TEEDFDYTMNTNLKG 119

Query: 161 SVYTTRFAVPHLRYTK-GKIVVLSSAASWLTAPRMSFYNASKAALVLFFETLRVELGSD- 218
           + + T+     +     G I  ++S A+       S Y  SK       ET+R+      
Sbjct: 120 TFFLTQALFALMERQHSGHIFFITSVAATKAFRHSSIYCMSKFGQRGLVETMRLYARKCN 179

Query: 219 VGVTIVTPGFIESELTQG 236
           V +T V PG + + +   
Sbjct: 180 VRITDVQPGAVYTPMWGK 197

>d1g0oa_ c.2.1.2 (A:) 1,3,8-trihydroxynaphtalene reductase (THNR, naphtol reductase) {Rice blast fungus (Magnaporthe grisea) [TaxId: 148305]} Length = 272

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: 1,3,8-trihydroxynaphtalene reductase (THNR, naphtol reductase)
species: Rice blast fungus (Magnaporthe grisea) [TaxId: 148305]

 Score =  136 bits (344), Expect = 6e-40
 Identities = 55/193 (28%), Positives = 96/193 (49%), Gaps = 4/193 (2%)

Query: 46  SGKVVIITGASSGIGEHLAYEYARRGACLALCARR-EKSLEEVADTAREIGSPDVITIRA 104
            GKV ++TGA  GIG  +A E  RRG  + +      +S EEV    ++ G  D   ++A
Sbjct: 17  EGKVALVTGAGRGIGREMAMELGRRGCKVIVNYANSTESAEEVVAAIKKNG-SDAACVKA 75

Query: 105 DVSKVDDCRSLVEETMNHFGRLDHLVNNAGISSVALFEDIVNITDFKQIMNINFWGSVYT 164
           +V  V+D   + EE +  FG+LD + +N+G+ S    +D+    +F ++  IN  G  + 
Sbjct: 76  NVGVVEDIVRMFEEAVKIFGKLDIVCSNSGVVSFGHVKDV-TPEEFDRVFTINTRGQFFV 134

Query: 165 TRFAVPHLRYTKGKIVVLSSAASWLTAPRMSFYNASKAALVLFFETLRVELGSD-VGVTI 223
            R A  HL      I++ S        P+ + Y+ SK A+  F   + +++    + V +
Sbjct: 135 AREAYKHLEIGGRLILMGSITGQAKAVPKHAVYSGSKGAIETFARCMAIDMADKKITVNV 194

Query: 224 VTPGFIESELTQG 236
           V PG I++++   
Sbjct: 195 VAPGGIKTDMYHA 207

>d2rhca1 c.2.1.2 (A:5-261) beta-keto acyl carrier protein reductase {Streptomyces coelicolor [TaxId: 1902]} Length = 257

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: beta-keto acyl carrier protein reductase
species: Streptomyces coelicolor [TaxId: 1902]

 Score =  134 bits (337), Expect = 5e-39
 Identities = 50/194 (25%), Positives = 84/194 (43%), Gaps = 6/194 (3%)

Query: 47  GKVVIITGASSGIGEHLAYEYARRGACLALCARREKSLEEVADTAREIGSPDVITIRADV 106
            +V ++TGA+SGIG  +A    + G  + +CAR E+ L       RE G  +      DV
Sbjct: 2   SEVALVTGATSGIGLEIARRLGKEGLRVFVCARGEEGLRTTLKELREAG-VEADGRTCDV 60

Query: 107 SKVDDCRSLVEETMNHFGRLDHLVNNAGISSVALFEDIVNITDFKQIMNINFWGSVYTTR 166
             V +  +LV   +  +G +D LVNNAG        ++     +  ++  N  G    T+
Sbjct: 61  RSVPEIEALVAAVVERYGPVDVLVNNAGRPGGGATAEL-ADELWLDVVETNLTGVFRVTK 119

Query: 167 FAVPHLRYTKGKIVVL---SSAASWLTAPRMSFYNASKAALVLFFETLRVELGSD-VGVT 222
             +      +     +   +S          + Y+ASK  +V F + L +EL    + V 
Sbjct: 120 QVLKAGGMLERGTGRIVNIASTGGKQGVVHAAPYSASKHGVVGFTKALGLELARTGITVN 179

Query: 223 IVTPGFIESELTQG 236
            V PGF+E+ +   
Sbjct: 180 AVCPGFVETPMAAS 193

>d1zema1 c.2.1.2 (A:3-262) Xylitol dehydrogenase {Gluconobacter oxydans [TaxId: 442]} Length = 260

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Xylitol dehydrogenase
species: Gluconobacter oxydans [TaxId: 442]

 Score =  133 bits (336), Expect = 7e-39
 Identities = 50/195 (25%), Positives = 84/195 (43%), Gaps = 3/195 (1%)

Query: 46  SGKVVIITGASSGIGEHLAYEYARRGACLALCARREKSLEEVADTAREIGSPDVITIRAD 105
           +GKV ++TGA   IG   A   A  G  +AL     ++LE+   + RE G  +  +   D
Sbjct: 4   NGKVCLVTGAGGNIGLATALRLAEEGTAIALLDMNREALEKAEASVREKG-VEARSYVCD 62

Query: 106 VSKVDDCRSLVEETMNHFGRLDHLVNNAGISSVALFEDIVNITDFKQIMNIN-FWGSVYT 164
           V+  +     V+  +  FG++D L NNAG              DF +++ IN        
Sbjct: 63  VTSEEAVIGTVDSVVRDFGKIDFLFNNAGYQGAFAPVQDYPSDDFARVLTINVTGAFHVL 122

Query: 165 TRFAVPHLRYTKGKIVVLSSAASWLTAPRMSFYNASKAALVLFFETLRVELGSD-VGVTI 223
              +   +    G+IV  +S A     P M+ Y  SK A++   ET  ++L    + V  
Sbjct: 123 KAVSRQMITQNYGRIVNTASMAGVKGPPNMAAYGTSKGAIIALTETAALDLAPYNIRVNA 182

Query: 224 VTPGFIESELTQGKF 238
           ++PG++       + 
Sbjct: 183 ISPGYMGPGFMWERQ 197

>d1geea_ c.2.1.2 (A:) Glucose dehydrogenase {Bacillus megaterium [TaxId: 1404]} Length = 261

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Glucose dehydrogenase
species: Bacillus megaterium [TaxId: 1404]

 Score =  133 bits (336), Expect = 9e-39
 Identities = 56/199 (28%), Positives = 106/199 (53%), Gaps = 6/199 (3%)

Query: 44  DVSGKVVIITGASSGIGEHLAYEYARRGACLALCARR-EKSLEEVADTAREIGSPDVITI 102
           D+ GKVV+ITG+S+G+G+ +A  +A   A + +  R  E     V +  +++G  + I +
Sbjct: 4   DLEGKVVVITGSSTGLGKSMAIRFATEKAKVVVNYRSKEDEANSVLEEIKKVG-GEAIAV 62

Query: 103 RADVSKVDDCRSLVEETMNHFGRLDHLVNNAGISSVALFEDIVNITDFKQIMNINFWGSV 162
           + DV+   D  +LV+  +  FG+LD ++NNAG+ +     ++ +++D+ ++++ N  G+ 
Sbjct: 63  KGDVTVESDVINLVQSAIKEFGKLDVMINNAGLENPVSSHEM-SLSDWNKVIDTNLTGAF 121

Query: 163 YTTRFAVPHLRYTK--GKIVVLSSAASWLTAPRMSFYNASKAALVLFFETLRVELGSD-V 219
             +R A+ +       G ++ +SS    +  P    Y ASK  + L  ETL +E     +
Sbjct: 122 LGSREAIKYFVENDIKGTVINMSSVHEKIPWPLFVHYAASKGGMKLMTETLALEYAPKGI 181

Query: 220 GVTIVTPGFIESELTQGKF 238
            V  + PG I + +   KF
Sbjct: 182 RVNNIGPGAINTPINAEKF 200

>d1yo6a1 c.2.1.2 (A:1-250) Putative carbonyl reductase sniffer {Caenorhabditis elegans [TaxId: 6239]} Length = 250

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Putative carbonyl reductase sniffer
species: Caenorhabditis elegans [TaxId: 6239]

 Score =  131 bits (329), Expect = 7e-38
 Identities = 47/213 (22%), Positives = 78/213 (36%), Gaps = 28/213 (13%)

Query: 46  SGKVVIITGASSGIGEHLAYEYARRGAC--LALCARREKSLEEVADTAREIGSPDVITIR 103
           S   V++TGA+ GIG  L  +  +      +   AR  +   E+      I    V  + 
Sbjct: 2   SPGSVVVTGANRGIGLGLVQQLVKDKNIRHIIATARDVEKATELK----SIKDSRVHVLP 57

Query: 104 ADVSKVDDCRSLVEETMNHFGR--LDHLVNNAGISSVALFEDIVNITDFKQIMNINFWGS 161
             V+      + V +     G   L  L+NNAG+          N     + +++N    
Sbjct: 58  LTVTCDKSLDTFVSKVGEIVGSDGLSLLINNAGVLLSYGTNTEPNRAVIAEQLDVNTTSV 117

Query: 162 VYTTRFAVPHLRYTKGKIVV-------------------LSSAASWLTAPRMSFYNASKA 202
           V  T+  +P L+    K                      ++   S      +  Y  SKA
Sbjct: 118 VLLTQKLLPLLKNAASKESGDQLSVSRAAVITISSGLGSITDNTSGSAQFPVLAYRMSKA 177

Query: 203 ALVLFFETLRVELGSD-VGVTIVTPGFIESELT 234
           A+ +F  TL V+L  D V V    PG++++ L 
Sbjct: 178 AINMFGRTLAVDLKDDNVLVVNFCPGWVQTNLG 210

>d1ae1a_ c.2.1.2 (A:) Tropinone reductase {Jimsonweed (Datura stramonium), I [TaxId: 4076]} Length = 258

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Tropinone reductase
species: Jimsonweed (Datura stramonium), I [TaxId: 4076]

 Score =  131 bits (329), Expect = 7e-38
 Identities = 62/198 (31%), Positives = 97/198 (48%), Gaps = 5/198 (2%)

Query: 44  DVSGKVVIITGASSGIGEHLAYEYARRGACLALCARREKSLEEVADTAREIGSPDVITIR 103
            + G   ++TG S GIG  +  E A  GA +  C+R EK L+E  +  RE G  +V    
Sbjct: 3   SLKGTTALVTGGSKGIGYAIVEELAGLGARVYTCSRNEKELDECLEIWREKG-LNVEGSV 61

Query: 104 ADVSKVDDCRSLVEETMNHF-GRLDHLVNNAGISSVALFEDIVNITDFKQIMNINFWGSV 162
            D+    +   L++   + F G+L+ LVNNAG+      +D     D+  IM  NF  + 
Sbjct: 62  CDLLSRTERDKLMQTVAHVFDGKLNILVNNAGVVIHKEAKDF-TEKDYNIIMGTNFEAAY 120

Query: 163 YTTRFAVPHLRY-TKGKIVVLSSAASWLTAPRMSFYNASKAALVLFFETLRVELGSD-VG 220
           + ++ A P L+    G ++ LSS A +   P +S Y+ASK A+    ++L  E   D + 
Sbjct: 121 HLSQIAYPLLKASQNGNVIFLSSIAGFSALPSVSLYSASKGAINQMTKSLACEWAKDNIR 180

Query: 221 VTIVTPGFIESELTQGKF 238
           V  V PG I + L +   
Sbjct: 181 VNSVAPGVILTPLVETAI 198

>d1fmca_ c.2.1.2 (A:) 7-alpha-hydroxysteroid dehydrogenase {Escherichia coli [TaxId: 562]} Length = 255

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: 7-alpha-hydroxysteroid dehydrogenase
species: Escherichia coli [TaxId: 562]

 Score =  130 bits (327), Expect = 2e-37
 Identities = 48/195 (24%), Positives = 92/195 (47%), Gaps = 5/195 (2%)

Query: 46  SGKVVIITGASSGIGEHLAYEYARRGACLALCARREKSLEEVADTAREIGSPDVITIRAD 105
            GK  IITGA +GIG+ +A  +A  GA + +      +   V D  +++G       R D
Sbjct: 10  DGKCAIITGAGAGIGKEIAITFATAGASVVVSDINADAANHVVDEIQQLG-GQAFACRCD 68

Query: 106 VSKVDDCRSLVEETMNHFGRLDHLVNNAGISSVALFEDIVNITDFKQIMNINFWGSVYTT 165
           ++   +  +L +  ++  G++D LVNNAG      F+  + + DF++   +N +   + +
Sbjct: 69  ITSEQELSALADFAISKLGKVDILVNNAGGGGPKPFD--MPMADFRRAYELNVFSFFHLS 126

Query: 166 RFAVPHLRYTKGKIVVL-SSAASWLTAPRMSFYNASKAALVLFFETLRVELGSD-VGVTI 223
           +   P +    G +++  +S A+      M+ Y +SKAA       +  +LG   + V  
Sbjct: 127 QLVAPEMEKNGGGVILTITSMAAENKNINMTSYASSKAAASHLVRNMAFDLGEKNIRVNG 186

Query: 224 VTPGFIESELTQGKF 238
           + PG I ++  +   
Sbjct: 187 IAPGAILTDALKSVI 201

>d2c07a1 c.2.1.2 (A:54-304) beta-keto acyl carrier protein reductase {Malaria parasite (Plasmodium falciparum) [TaxId: 5833]} Length = 251

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: beta-keto acyl carrier protein reductase
species: Malaria parasite (Plasmodium falciparum) [TaxId: 5833]

 Score =  127 bits (321), Expect = 1e-36
 Identities = 53/199 (26%), Positives = 92/199 (46%), Gaps = 4/199 (2%)

Query: 38  NSIFSEDVSGKVVIITGASSGIGEHLAYEYARRGACLALCARREKSLEEVADTAREIGSP 97
           N  +  +   KV ++TGA  GIG  +A   A+  + +   +R +KS + V D  +  G  
Sbjct: 3   NYYYCGE--NKVALVTGAGRGIGREIAKMLAKSVSHVICISRTQKSCDSVVDEIKSFG-Y 59

Query: 98  DVITIRADVSKVDDCRSLVEETMNHFGRLDHLVNNAGISSVALFEDIVNITDFKQIMNIN 157
           +      DVSK ++   ++ + +     +D LVNNAGI+   LF  + N      +    
Sbjct: 60  ESSGYAGDVSKKEEISEVINKILTEHKNVDILVNNAGITRDNLFLRMKNDEWEDVLRTNL 119

Query: 158 FWGSVYTTRFAVPHLRYTKGKIVVLSSAASWLTAPRMSFYNASKAALVLFFETLRVELGS 217
                 T   +   +    G+I+ +SS          + Y++SKA ++ F ++L  EL S
Sbjct: 120 NSLFYITQPISKRMINNRYGRIINISSIVGLTGNVGQANYSSSKAGVIGFTKSLAKELAS 179

Query: 218 D-VGVTIVTPGFIESELTQ 235
             + V  + PGFI S++T 
Sbjct: 180 RNITVNAIAPGFISSDMTD 198

>d1wmaa1 c.2.1.2 (A:2-276) Carbonyl reductase/20beta-hydroxysteroid dehydrogenase {Human (Homo sapiens) [TaxId: 9606]} Length = 275

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Carbonyl reductase/20beta-hydroxysteroid dehydrogenase
species: Human (Homo sapiens) [TaxId: 9606]

 Score =  128 bits (321), Expect = 2e-36
 Identities = 43/242 (17%), Positives = 79/242 (32%), Gaps = 51/242 (21%)

Query: 46  SGK-VVIITGASSGIGEHLAYEYARR-GACLALCARREKSLEEVADTAREIGSPDVITIR 103
           SG  V ++TG + GIG  +  +  R     + L AR     +      +  G       +
Sbjct: 1   SGIHVALVTGGNKGIGLAIVRDLCRLFSGDVVLTARDVTRGQAAVQQLQAEG-LSPRFHQ 59

Query: 104 ADVSKVDDCRSLVEETMNHFGRLDHLVNNAGISSVALFEDIVNITDFKQIMNINFWGSVY 163
            D+  +   R+L +     +G LD LVNNAGI+              +  M  NF+G+  
Sbjct: 60  LDIDDLQSIRALRDFLRKEYGGLDVLVNNAGIAFKVADPTP-FHIQAEVTMKTNFFGTRD 118

Query: 164 TTRFAVPHLRYTKGKIVVLSSAASWLTAPRMSF--------------------------- 196
                +P ++  +G++V +SS  S       S                            
Sbjct: 119 VCTELLPLIK-PQGRVVNVSSIMSVRALKSCSPELQQKFRSETITEEELVGLMNKFVEDT 177

Query: 197 --------------YNASKAALVLFFETLRVELGSD-----VGVTIVTPGFIESELTQGK 237
                         Y  +K  + +       +L        + +    PG++ +++   K
Sbjct: 178 KKGVHQKEGWPSSAYGVTKIGVTVLSRIHARKLSEQRKGDKILLNACCPGWVRTDMAGPK 237

Query: 238 FL 239
             
Sbjct: 238 AT 239

>d1x1ta1 c.2.1.2 (A:1-260) D(-)-3-hydroxybutyrate dehydrogenase {Pseudomonas fragi [TaxId: 296]} Length = 260

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: D(-)-3-hydroxybutyrate dehydrogenase
species: Pseudomonas fragi [TaxId: 296]

 Score =  127 bits (320), Expect = 2e-36
 Identities = 53/195 (27%), Positives = 89/195 (45%), Gaps = 2/195 (1%)

Query: 46  SGKVVIITGASSGIGEHLAYEYARRGACLALCARREKS-LEEVADTAREIGSPDVITIRA 104
            GKV ++TG++SGIG  +A   A +GA + L    + + +E+V           V+   A
Sbjct: 3   KGKVAVVTGSTSGIGLGIATALAAQGADIVLNGFGDAAEIEKVRAGLAAQHGVKVLYDGA 62

Query: 105 DVSKVDDCRSLVEETMNHFGRLDHLVNNAGISSVALFEDIVNITDFKQIMNINFWGSVYT 164
           D+SK +  R LV+  +   GR+D LVNNAGI   AL ED         +          T
Sbjct: 63  DLSKGEAVRGLVDNAVRQMGRIDILVNNAGIQHTALIEDFPTEKWDAILALNLSAVFHGT 122

Query: 165 TRFAVPHLRYTKGKIVVLSSAASWLTAPRMSFYNASKAALVLFFETLRVELGSD-VGVTI 223
                   +   G+I+ ++SA   + +   S Y A+K  +V F +   +E     +    
Sbjct: 123 AAALPHMKKQGFGRIINIASAHGLVASANKSAYVAAKHGVVGFTKVTALETAGQGITANA 182

Query: 224 VTPGFIESELTQGKF 238
           + PG++ + L + + 
Sbjct: 183 ICPGWVRTPLVEKQI 197

>d1nffa_ c.2.1.2 (A:) Putative oxidoreductase Rv2002 {Mycobacterium tuberculosis [TaxId: 1773]} Length = 244

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Putative oxidoreductase Rv2002
species: Mycobacterium tuberculosis [TaxId: 1773]

 Score =  126 bits (318), Expect = 3e-36
 Identities = 46/193 (23%), Positives = 89/193 (46%), Gaps = 7/193 (3%)

Query: 46  SGKVVIITGASSGIGEHLAYEYARRGACLALCARREKSLEEVADTAREIGSPDVITIRAD 105
           +GKV +++G + G+G          GA +      ++  + +A    E+       +  D
Sbjct: 5   TGKVALVSGGARGMGASHVRAMVAEGAKVVFGDILDEEGKAMAA---ELAD-AARYVHLD 60

Query: 106 VSKVDDCRSLVEETMNHFGRLDHLVNNAGISSVALFEDIVNITDFKQIMNINFWGSVYTT 165
           V++    ++ V+  +  FG L  LVNNAGI ++   ED   +T++++I+++N  G     
Sbjct: 61  VTQPAQWKAAVDTAVTAFGGLHVLVNNAGILNIGTIEDY-ALTEWQRILDVNLTGVFLGI 119

Query: 166 R-FAVPHLRYTKGKIVVLSSAASWLTAPRMSFYNASKAALVLFFETLRVELGSD-VGVTI 223
           R    P     +G I+ +SS            Y A+K A+    ++  +ELG   + V  
Sbjct: 120 RAVVKPMKEAGRGSIINISSIEGLAGTVACHGYTATKFAVRGLTKSTALELGPSGIRVNS 179

Query: 224 VTPGFIESELTQG 236
           + PG +++ +T  
Sbjct: 180 IHPGLVKTPMTDW 192

>d1zmta1 c.2.1.2 (A:2-253) Halohydrin dehalogenase HheC {Agrobacterium tumefaciens [TaxId: 358]} Length = 252

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Halohydrin dehalogenase HheC
species: Agrobacterium tumefaciens [TaxId: 358]

 Score =  125 bits (314), Expect = 1e-35
 Identities = 35/200 (17%), Positives = 70/200 (35%), Gaps = 9/200 (4%)

Query: 50  VIITGASSGIGEHLAYEYARRGACLALCARREKSLEEVADTAREIGSPDVITIRADVSKV 109
            I+T      G   A   +  G  +A      K  +E+   A           +      
Sbjct: 3   AIVTNVKHFGGMGSALRLSEAGHTVACHDESFKQKDELEAFAETY-------PQLKPMSE 55

Query: 110 DDCRSLVEETMNHFGRLDHLVNNAGISSVALFEDIVNITDFKQIMNINFWGSVY-TTRFA 168
            +   L+E   + +G++D LV+N   +      D   + D++  +              A
Sbjct: 56  QEPAELIEAVTSAYGQVDVLVSNDIFAPEFQPIDKYAVEDYRGAVEALQIRPFALVNAVA 115

Query: 169 VPHLRYTKGKIVVLSSAASWLTAPRMSFYNASKAALVLFFETLRVELGSD-VGVTIVTPG 227
               +   G I+ ++SA  +     +S Y +++A        L  ELG   + V  + P 
Sbjct: 116 SQMKKRKSGHIIFITSATPFGPWKELSTYTSARAGACTLANALSKELGEYNIPVFAIGPN 175

Query: 228 FIESELTQGKFLTGRRQNSD 247
           ++ SE +   + T   + + 
Sbjct: 176 YLHSEDSPYFYPTEPWKTNP 195

>d2a4ka1 c.2.1.2 (A:2-242) beta-keto acyl carrier protein reductase {Thermus thermophilus, TTHB020 [TaxId: 274]} Length = 241

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: beta-keto acyl carrier protein reductase
species: Thermus thermophilus, TTHB020 [TaxId: 274]

 Score =  124 bits (312), Expect = 2e-35
 Identities = 57/204 (27%), Positives = 96/204 (47%), Gaps = 8/204 (3%)

Query: 46  SGKVVIITGASSGIGEHLAYEYARRGACLALCARREKSLEEVADTAREIGSPDVITIRAD 105
           SGK +++TGA+SGIG      +AR GA L    R E+ L E       + + + I + AD
Sbjct: 4   SGKTILVTGAASGIGRAALDLFAREGASLVAVDREERLLAE---AVAALEA-EAIAVVAD 59

Query: 106 VSKVDDCRSLVEETMNHFGRLDHLVNNAGISSVALFEDIVNITDFKQIMNINFWGSVYTT 165
           VS      ++  E +  FGRL  + + AG++  AL  ++  +  +++++ +N  GS    
Sbjct: 60  VSDPKAVEAVFAEALEEFGRLHGVAHFAGVAHSALSWNL-PLEAWEKVLRVNLTGSFLVA 118

Query: 166 RFAVPHLRYTKGKIVVLSSAASWLTAPRMSFYNASKAALVLFFETLRVELGSD-VGVTIV 224
           R A   L      ++    + + L A  ++ Y A K  +V    TL +EL    V V ++
Sbjct: 119 RKAGEVLEEGGSLVLT--GSVAGLGAFGLAHYAAGKLGVVGLARTLALELARKGVRVNVL 176

Query: 225 TPGFIESELTQGKFLTGRRQNSDR 248
            PG I++ +T G       Q    
Sbjct: 177 LPGLIQTPMTAGLPPWAWEQEVGA 200

>d1q7ba_ c.2.1.2 (A:) beta-keto acyl carrier protein reductase {Escherichia coli [TaxId: 562]} Length = 243

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: beta-keto acyl carrier protein reductase
species: Escherichia coli [TaxId: 562]

 Score =  123 bits (310), Expect = 4e-35
 Identities = 54/203 (26%), Positives = 99/203 (48%), Gaps = 7/203 (3%)

Query: 44  DVSGKVVIITGASSGIGEHLAYEYARRGACLALCARREKSLEEVADTAREIGSPDVITIR 103
           +  GK+ ++TGAS GIG  +A   A RGA +   A  E   + ++D    +G+ +   + 
Sbjct: 1   NFEGKIALVTGASRGIGRAIAETLAARGAKVIGTATSENGAQAISD---YLGA-NGKGLM 56

Query: 104 ADVSKVDDCRSLVEETMNHFGRLDHLVNNAGISSVALFEDIVNITDFKQIMNINFWGSVY 163
            +V+      S++E+    FG +D LVNNAGI+        +   ++  I+  N      
Sbjct: 57  LNVTDPASIESVLEKIRAEFGEVDILVNNAGITRDN-LLMRMKDEEWNDIIETNLSSVFR 115

Query: 164 TTRFAVPHLRYTK-GKIVVLSSAASWLTAPRMSFYNASKAALVLFFETLRVELGSD-VGV 221
            ++  +  +   + G+I+ + S    +     + Y A+KA L+ F ++L  E+ S  + V
Sbjct: 116 LSKAVMRAMMKKRHGRIITIGSVVGTMGNGGQANYAAAKAGLIGFSKSLAREVASRGITV 175

Query: 222 TIVTPGFIESELTQGKFLTGRRQ 244
            +V PGFIE+++T+      R  
Sbjct: 176 NVVAPGFIETDMTRALSDDQRAG 198

>d1oaaa_ c.2.1.2 (A:) Sepiapterin reductase {Mouse (Mus musculus) [TaxId: 10090]} Length = 259

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Sepiapterin reductase
species: Mouse (Mus musculus) [TaxId: 10090]

 Score =  123 bits (310), Expect = 5e-35
 Identities = 42/208 (20%), Positives = 78/208 (37%), Gaps = 14/208 (6%)

Query: 42  SEDVSGKVVIITGASSGIGEHLAYEYAR---RGACLALCARREKSLEEVADTAREIGS-P 97
           ++ +   V ++TGAS G G  LA + AR    G+ + + AR E  L ++ +         
Sbjct: 1   ADGLGCAVCVLTGASRGFGRALAPQLARLLSPGSVMLVSARSESMLRQLKEELGAQQPDL 60

Query: 98  DVITIRADVSKVDDCRSLV----EETMNHFGRLDHLVNNAGISSVALFEDIVNIT--DFK 151
            V+   AD+      + L+    E       +   L+NNA          +      +  
Sbjct: 61  KVVLAAADLGTEAGVQRLLSAVRELPRPEGLQRLLLINNAATLGDVSKGFLNVNDLAEVN 120

Query: 152 QIMNINFWGSVYTTRFAVPHLRYTK---GKIVVLSSAASWLTAPRMSFYNASKAALVLFF 208
               +N    +  T   +   + +      +V +SS  +         Y A KAA  + +
Sbjct: 121 NYWALNLTSMLCLTSGTLNAFQDSPGLSKTVVNISSLCALQPYKGWGLYCAGKAARDMLY 180

Query: 209 ETLRVELGSDVGVTIVTPGFIESELTQG 236
           + L  E    V V    PG +++++ Q 
Sbjct: 181 QVLAAE-EPSVRVLSYAPGPLDNDMQQL 207

>d1gega_ c.2.1.2 (A:) meso-2,3-butanediol dehydrogenase {Klebsiella pneumoniae [TaxId: 573]} Length = 255

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: meso-2,3-butanediol dehydrogenase
species: Klebsiella pneumoniae [TaxId: 573]

 Score =  122 bits (306), Expect = 2e-34
 Identities = 50/192 (26%), Positives = 88/192 (45%), Gaps = 5/192 (2%)

Query: 48  KVVIITGASSGIGEHLAYEYARRGACLALCARREKSLEEVADTAREIGSPDVITIRADVS 107
           KV ++TGA  GIG+ +A    + G  +A+    + + + VA    + G    + ++ DVS
Sbjct: 2   KVALVTGAGQGIGKAIALRLVKDGFAVAIADYNDATAKAVASEINQAG-GHAVAVKVDVS 60

Query: 108 KVDDCRSLVEETMNHFGRLDHLVNNAGISSVALFEDIVNITDFKQIMNINFWGSVYTTRF 167
             D   + VE+     G  D +VNNAG++     E I       ++ NIN  G ++  + 
Sbjct: 61  DRDQVFAAVEQARKTLGGFDVIVNNAGVAPSTPIESI-TPEIVDKVYNINVKGVIWGIQA 119

Query: 168 AVP--HLRYTKGKIVVLSSAASWLTAPRMSFYNASKAALVLFFETLRVELGSD-VGVTIV 224
           AV         GKI+   S A  +  P ++ Y++SK A+    +T   +L    + V   
Sbjct: 120 AVEAFKKEGHGGKIINACSQAGHVGNPELAVYSSSKFAVRGLTQTAARDLAPLGITVNGY 179

Query: 225 TPGFIESELTQG 236
            PG +++ +   
Sbjct: 180 CPGIVKTPMWAE 191

>d1w6ua_ c.2.1.2 (A:) 2,4-dienoyl-CoA reductase, mitochondrial (DECR) {Human (Homo sapiens), [TaxId: 9606]} Length = 294

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: 2,4-dienoyl-CoA reductase, mitochondrial (DECR)
species: Human (Homo sapiens), [TaxId: 9606]

 Score =  122 bits (307), Expect = 3e-34
 Identities = 36/211 (17%), Positives = 81/211 (38%), Gaps = 3/211 (1%)

Query: 31  KFLLSVFNSIF-SEDVSGKVVIITGASSGIGEHLAYEYARRGACLALCARREKSLEEVAD 89
           KF   +  ++       GKV  ITG  +G+G+ +    +  GA   + +R+   L+  A+
Sbjct: 8   KFFSPLQKAMLPPNSFQGKVAFITGGGTGLGKGMTTLLSSLGAQCVIASRKMDVLKATAE 67

Query: 90  TAREIGSPDVITIRADVSKVDDCRSLVEETMNHFGRLDHLVNNAGISSVALFEDIVNITD 149
                    V  I+ DV   D  ++ V E +   G  + ++NNA  + ++  E +     
Sbjct: 68  QISSQTGNKVHAIQCDVRDPDMVQNTVSELIKVAGHPNIVINNAAGNFISPTERLSPNAW 127

Query: 150 FKQIMNINFWGSVYTTRFAVPH-LRYTKGKIVVLSSAASWLTAPRMSFYNASKAALVLFF 208
                 +    +  T                + +++  +   +  +    ++KA +    
Sbjct: 128 KTITDIVLNGTAFVTLEIGKQLIKAQKGAAFLSITTIYAETGSGFVVPSASAKAGVEAMS 187

Query: 209 ETLRVELGSD-VGVTIVTPGFIESELTQGKF 238
           ++L  E G   +   ++ PG I+++    + 
Sbjct: 188 KSLAAEWGKYGMRFNVIQPGPIKTKGAFSRL 218

>d1edoa_ c.2.1.2 (A:) beta-keto acyl carrier protein reductase {Oil seed rape (Brassica napus) [TaxId: 3708]} Length = 244

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: beta-keto acyl carrier protein reductase
species: Oil seed rape (Brassica napus) [TaxId: 3708]

 Score =  120 bits (302), Expect = 6e-34
 Identities = 57/192 (29%), Positives = 101/192 (52%), Gaps = 5/192 (2%)

Query: 48  KVVIITGASSGIGEHLAYEYARRGACLAL-CARREKSLEEVADTAREIGSPDVITIRADV 106
            VV++TGAS GIG+ +A    + G  + +  AR  K+ EEV+      G    IT   DV
Sbjct: 2   PVVVVTGASRGIGKAIALSLGKAGCKVLVNYARSAKAAEEVSKQIEAYG-GQAITFGGDV 60

Query: 107 SKVDDCRSLVEETMNHFGRLDHLVNNAGISSVALFEDIVNITDFKQIMNINFWGSVYTTR 166
           SK  D  ++++  ++ +G +D +VNNAGI+   L   +   + + +++++N  G    T+
Sbjct: 61  SKEADVEAMMKTAIDAWGTIDVVVNNAGITRDTLLIRM-KKSQWDEVIDLNLTGVFLCTQ 119

Query: 167 FAVPHLRYTK-GKIVVLSSAASWLTAPRMSFYNASKAALVLFFETLRVELGSD-VGVTIV 224
            A   +   + G+I+ ++S    +     + Y A+KA ++ F +T   E  S  + V +V
Sbjct: 120 AATKIMMKKRKGRIINIASVVGLIGNIGQANYAAAKAGVIGFSKTAAREGASRNINVNVV 179

Query: 225 TPGFIESELTQG 236
            PGFI S++T  
Sbjct: 180 CPGFIASDMTAK 191

>d1jtva_ c.2.1.2 (A:) Human estrogenic 17beta-hydroxysteroid dehydrogenase {Human (Homo sapiens) [TaxId: 9606]} Length = 285

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Human estrogenic 17beta-hydroxysteroid dehydrogenase
species: Human (Homo sapiens) [TaxId: 9606]

 Score =  121 bits (303), Expect = 9e-34
 Identities = 43/195 (22%), Positives = 80/195 (41%), Gaps = 10/195 (5%)

Query: 48  KVVIITGASSGIGEHLAYEYARRGA---CLALCARREKSLEEVADTAREIGSP--DVITI 102
            VV+ITG SSGIG HLA   A   +    +    R  K+   + + AR +  P   + T+
Sbjct: 3   TVVLITGCSSGIGLHLAVRLASDPSQSFKVYATLRDLKTQGRLWEAARALACPPGSLETL 62

Query: 103 RADVSKVDDCRSLVEETMNHFGRLDHLVNNAGISSVALFEDIVNITDFKQIMNINFWGSV 162
           + DV       +  E           ++       +    + +       ++++N  G+V
Sbjct: 63  QLDVRDSKSVAAARERVTEGR---VDVLVCNAGLGLLGPLEALGEDAVASVLDVNVVGTV 119

Query: 163 YTTRFAVPHLRYTK-GKIVVLSSAASWLTAPRMSFYNASKAALVLFFETLRVELGSD-VG 220
              +  +P ++    G+++V  S    +  P    Y ASK AL    E+L V L    V 
Sbjct: 120 RMLQAFLPDMKRRGSGRVLVTGSVGGLMGLPFNDVYCASKFALEGLCESLAVLLLPFGVH 179

Query: 221 VTIVTPGFIESELTQ 235
           ++++  G + +   +
Sbjct: 180 LSLIECGPVHTAFME 194

>d2ag5a1 c.2.1.2 (A:1-245) Dehydrogenase/reductase SDR family member 6, DHRS6 {Human (Homo sapiens) [TaxId: 9606]} Length = 245

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Dehydrogenase/reductase SDR family member 6, DHRS6
species: Human (Homo sapiens) [TaxId: 9606]

 Score =  115 bits (288), Expect = 6e-32
 Identities = 51/206 (24%), Positives = 83/206 (40%), Gaps = 14/206 (6%)

Query: 46  SGKVVIITGASSGIGEHLAYEYARRGACLALCARREKSLEEVADTAREIGSPDVITIRAD 105
            GKV+I+T A+ GIG+  A  +AR GA +      E  L+E+         P + T   D
Sbjct: 5   DGKVIILTAAAQGIGQAAALAFAREGAKVIATDINESKLQELEK------YPGIQTRVLD 58

Query: 106 VSKVDDCRSLVEETMNHFGRLDHLVNNAGISSVALFEDIVNITDFKQIMNINFWGSVYTT 165
           V+K         +  N   RLD L N AG        D     D+   MN+N        
Sbjct: 59  VTKKKQID----QFANEVERLDVLFNVAGFVHHGTVLDC-EEKDWDFSMNLNVRSMYLMI 113

Query: 166 RFAVPHLRY-TKGKIVVLSSAASWLTAPRMSF-YNASKAALVLFFETLRVELGSD-VGVT 222
           +  +P +     G I+ +SS AS +        Y+ +KAA++   +++  +     +   
Sbjct: 114 KAFLPKMLAQKSGNIINMSSVASSVKGVVNRCVYSTTKAAVIGLTKSVAADFIQQGIRCN 173

Query: 223 IVTPGFIESELTQGKFLTGRRQNSDR 248
            V PG +++   Q +          R
Sbjct: 174 CVCPGTVDTPSLQERIQARGNPEEAR 199

>d1uzma1 c.2.1.2 (A:9-245) beta-keto acyl carrier protein reductase {Mycobacterium tuberculosis [TaxId: 1773]} Length = 237

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: beta-keto acyl carrier protein reductase
species: Mycobacterium tuberculosis [TaxId: 1773]

 Score =  113 bits (283), Expect = 3e-31
 Identities = 44/193 (22%), Positives = 89/193 (46%), Gaps = 15/193 (7%)

Query: 46  SGKVVIITGASSGIGEHLAYEYARRGACLALCARREKSLEEVADTAREIGSPDVITIRAD 105
             + V++TG + GIG  +A   A  G  +A+  R   + +             +  +  D
Sbjct: 6   VSRSVLVTGGNRGIGLAIAQRLAADGHKVAVTHRGSGAPKG------------LFGVEVD 53

Query: 106 VSKVDDCRSLVEETMNHFGRLDHLVNNAGISSVALFEDIVNITDFKQIMNINFWGSVYTT 165
           V+  D           H G ++ LV+NAG+S+ A    +     F++++N N  G+    
Sbjct: 54  VTDSDAVDRAFTAVEEHQGPVEVLVSNAGLSADAFLMRM-TEEKFEKVINANLTGAFRVA 112

Query: 166 RFAVPHLRYTK-GKIVVLSSAASWLTAPRMSFYNASKAALVLFFETLRVEL-GSDVGVTI 223
           + A   ++  K G+++ + S +        + Y ASKA ++    ++  EL  ++V   +
Sbjct: 113 QRASRSMQRNKFGRMIFIGSVSGLWGIGNQANYAASKAGVIGMARSIARELSKANVTANV 172

Query: 224 VTPGFIESELTQG 236
           V PG+I++++T+ 
Sbjct: 173 VAPGYIDTDMTRA 185

>d1k2wa_ c.2.1.2 (A:) Sorbitol dehydrogenase {Rhodobacter sphaeroides [TaxId: 1063]} Length = 256

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Sorbitol dehydrogenase
species: Rhodobacter sphaeroides [TaxId: 1063]

 Score =  113 bits (284), Expect = 4e-31
 Identities = 52/194 (26%), Positives = 89/194 (45%), Gaps = 8/194 (4%)

Query: 46  SGKVVIITGASSGIGEHLAYEYARRGACLALCARREKSLEEVADTAREIGSPDVITIRAD 105
            GK  +ITG++ GIG   A  Y R GA +A+     ++    A    EIG P    I  D
Sbjct: 4   DGKTALITGSARGIGRAFAEAYVREGARVAIADINLEAARATAA---EIG-PAACAIALD 59

Query: 106 VSKVDDCRSLVEETMNHFGRLDHLVNNAGISSVALFEDIVNITDFKQIMNINFWGSVYTT 165
           V+        V E ++ +G +D LVNNA +  +A   +I     + ++  IN  G+++  
Sbjct: 60  VTDQASIDRCVAELLDRWGSIDILVNNAALFDLAPIVEI-TRESYDRLFAINVSGTLFMM 118

Query: 166 RFAVPHL--RYTKGKIVVLSSAASWLTAPRMSFYNASKAALVLFFETLRVELGSD-VGVT 222
           +     +      GKI+ ++S A       +  Y A+KAA++   ++  + L    + V 
Sbjct: 119 QAVARAMIAGGRGGKIINMASQAGRRGEALVGVYCATKAAVISLTQSAGLNLIRHGINVN 178

Query: 223 IVTPGFIESELTQG 236
            + PG ++ E   G
Sbjct: 179 AIAPGVVDGEHWDG 192

>d1o5ia_ c.2.1.2 (A:) beta-keto acyl carrier protein reductase {Thermotoga maritima [TaxId: 2336]} Length = 234

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: beta-keto acyl carrier protein reductase
species: Thermotoga maritima [TaxId: 2336]

 Score =  112 bits (281), Expect = 6e-31
 Identities = 47/195 (24%), Positives = 85/195 (43%), Gaps = 19/195 (9%)

Query: 46  SGKVVIITGASSGIGEHLAYEYARRGACLALCARREKSLEEVADTAREIGSPDVITIRAD 105
             K V++  AS GIG  +A   ++ GA + +CAR E+ L+                +  D
Sbjct: 3   RDKGVLVLAASRGIGRAVADVLSQEGAEVTICARNEELLKRSGHRY----------VVCD 52

Query: 106 VSKVDDCRSLVEETMNHFGRLDHLVNNAGISSVALFEDIVNITDFKQIMNINFWGSVYTT 165
           + K       ++        +D LV NAG      F+++    DFK+ ++  F   +   
Sbjct: 53  LRKD------LDLLFEKVKEVDILVLNAGGPKAGFFDEL-TNEDFKEAIDSLFLNMIKIV 105

Query: 166 RFAVPHLRYTK-GKIVVLSSAASWLTAPRMSFYNASKAALVLFFETLRVELGSD-VGVTI 223
           R  +P ++    G+IV ++S +       +   N+++ AL  F +TL  E+    + V  
Sbjct: 106 RNYLPAMKEKGWGRIVAITSFSVISPIENLYTSNSARMALTGFLKTLSFEVAPYGITVNC 165

Query: 224 VTPGFIESELTQGKF 238
           V PG+ E+E  +   
Sbjct: 166 VAPGWTETERVKELL 180

>d1dhra_ c.2.1.2 (A:) Dihydropteridin reductase (pteridine reductase) {Rat (Rattus norvegicus) [TaxId: 10116]} Length = 236

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Dihydropteridin reductase (pteridine reductase)
species: Rat (Rattus norvegicus) [TaxId: 10116]

 Score =  111 bits (279), Expect = 1e-30
 Identities = 27/191 (14%), Positives = 62/191 (32%), Gaps = 17/191 (8%)

Query: 47  GKVVIITGASSGIGEHLAYEYARRGACLALCARREKSLEEVADTAREIGSPDVITIRADV 106
            + V++ G    +G      +  R   +A     E      +           + ++   
Sbjct: 2   ARRVLVYGGRGALGSRCVQAFRARNWWVASIDVVENEEASAS-----------VIVKMTD 50

Query: 107 SKVDDCRSLVEETMNHFG--RLDHLVNNAGISSVALFEDIVNITDFKQIMNINFWGSVYT 164
           S  +    +  E     G  ++D ++  AG  +    +      +   +   + W S  +
Sbjct: 51  SFTEQADQVTAEVGKLLGDQKVDAILCVAGGWAGGNAKSKSLFKNCDLMWKQSIWTSTIS 110

Query: 165 TRFAVPHLRYTKGKIVVLSSAASWLTAPRMSFYNASKAALVLFFETLRVELG---SDVGV 221
           +  A  HL+      +   + A+    P M  Y  +K A+    ++L  +     S    
Sbjct: 111 SHLATKHLKEGGLLTLA-GAKAALDGTPGMIGYGMAKGAVHQLCQSLAGKNSGMPSGAAA 169

Query: 222 TIVTPGFIESE 232
             V P  +++ 
Sbjct: 170 IAVLPVTLDTP 180

>d1ulua_ c.2.1.2 (A:) Enoyl-ACP reductase {Thermus thermophilus [TaxId: 274]} Length = 256

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Enoyl-ACP reductase
species: Thermus thermophilus [TaxId: 274]

 Score =  109 bits (273), Expect = 1e-29
 Identities = 45/180 (25%), Positives = 75/180 (41%), Gaps = 8/180 (4%)

Query: 44  DVSGKVVIITGASS--GIGEHLAYEYARRGACLALCARREKSLEEVADTAREIGSPDVIT 101
           D+SGK  ++ G ++   +G  +A +    GA +AL  + E+   E    A  +G   +  
Sbjct: 5   DLSGKKALVMGVTNQRSLGFAIAAKLKEAGAEVALSYQAERLRPEAEKLAEALGGALLFR 64

Query: 102 IRADVSKVDDCRSLVEETMNHFGRLDHLVNNAGISSVALFEDIV---NITDFKQIMNINF 158
               V++ ++  +L       FG LD+LV+    +     E         D+   + ++ 
Sbjct: 65  AD--VTQDEELDALFAGVKEAFGGLDYLVHAIAFAPREAMEGRYIDTRRQDWLLALEVSA 122

Query: 159 WGSVYTTRFAVPHLRYTKGKIVVLSSAASWLTAPRMSFYNASKAALVLFFETLRVELGSD 218
           +  V   R A P L    G IV L+  AS    P+ +    +KAAL      L  ELG  
Sbjct: 123 YSLVAVARRAEPLL-REGGGIVTLTYYASEKVVPKYNVMAIAKAALEASVRYLAYELGPK 181

>d1ooea_ c.2.1.2 (A:) Dihydropteridin reductase (pteridine reductase) {Nematode (Caenorhabditis elegans) [TaxId: 6239]} Length = 235

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Dihydropteridin reductase (pteridine reductase)
species: Nematode (Caenorhabditis elegans) [TaxId: 6239]

 Score =  106 bits (264), Expect = 2e-28
 Identities = 29/198 (14%), Positives = 70/198 (35%), Gaps = 17/198 (8%)

Query: 46  SGKVVIITGASSGIGEHLAYEYARRGACLALCARREKSLEEVADTAREIGSPDVITIRAD 105
           S   VI+ G    +G  +   + + G  +           +             I +  +
Sbjct: 1   SSGKVIVYGGKGALGSAILEFFKKNGYTVLNIDLSANDQADSN-----------ILVDGN 49

Query: 106 VSKVDDCRSLVEETMN--HFGRLDHLVNNAGISSVALFEDIVNITDFKQIMNINFWGSVY 163
            +  +  +S++E+T +     ++D +   AG  +         + +   ++  + W S  
Sbjct: 50  KNWTEQEQSILEQTASSLQGSQVDGVFCVAGGWAGGSASSKDFVKNADLMIKQSVWSSAI 109

Query: 164 TTRFAVPHLRYTKGKIVVLSSAASWLTAPRMSFYNASKAALVLFFETLRVELGS---DVG 220
             + A  H     G + +  +AA+    P M  Y  +KAA+     +L  +      +  
Sbjct: 110 AAKLATTH-LKPGGLLQLTGAAAAMGPTPSMIGYGMAKAAVHHLTSSLAAKDSGLPDNSA 168

Query: 221 VTIVTPGFIESELTQGKF 238
           V  + P  +++ + +   
Sbjct: 169 VLTIMPVTLDTPMNRKWM 186

>d1mxha_ c.2.1.2 (A:) Dihydropteridin reductase (pteridine reductase) {Trypanosoma cruzi [TaxId: 5693]} Length = 266

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Dihydropteridin reductase (pteridine reductase)
species: Trypanosoma cruzi [TaxId: 5693]

 Score =  103 bits (258), Expect = 3e-27
 Identities = 39/211 (18%), Positives = 68/211 (32%), Gaps = 22/211 (10%)

Query: 49  VVIITGASSGIGEHLAYEYARRGACLALCARR-EKSLEEVADTAREIGSPDVITIRADVS 107
             +ITG +  IG  +A    ++G  + +  R  E + + +        +   +  + D+S
Sbjct: 3   AAVITGGARRIGHSIAVRLHQQGFRVVVHYRHSEGAAQRLVAELNAARAGSAVLCKGDLS 62

Query: 108 K----VDDCRSLVEETMNHFGRLDHLVNNAGISSVALFEDI----------VNITDFKQI 153
                +D C  +++ +   FGR D LVNNA                            ++
Sbjct: 63  LSSSLLDCCEDIIDCSFRAFGRCDVLVNNASAYYPTPLLPGDDTNGAADAKPIDAQVAEL 122

Query: 154 MNINFWGSVYTTRFAVPHLR------YTKGKIVVLSSAASWLTAPRMSFYNASKAALVLF 207
              N    ++  R                  +V L  A + L  P    Y  +K AL   
Sbjct: 123 FGSNAVAPLFLIRAFARRQGEGGAWRSRNLSVVNLCDAMTDLPLPGFCVYTMAKHALGGL 182

Query: 208 FETLRVELGSD-VGVTIVTPGFIESELTQGK 237
                +EL    + V  V PG         +
Sbjct: 183 TRAAALELAPRHIRVNAVAPGLSLLPPAMPQ 213

>d1uaya_ c.2.1.2 (A:) Type II 3-hydroxyacyl-CoA dehydrogenase {Thermus thermophilus [TaxId: 274]} Length = 241

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Type II 3-hydroxyacyl-CoA dehydrogenase
species: Thermus thermophilus [TaxId: 274]

 Score = 99.9 bits (248), Expect = 4e-26
 Identities = 40/200 (20%), Positives = 72/200 (36%), Gaps = 25/200 (12%)

Query: 48  KVVIITGASSGIGEHLAYEYARRGACLALCARREKSLEEVADTAREIGSPDVITIRADVS 107
           +  ++TG +SG+G   A     RG  + +   R +               D+I +  DV+
Sbjct: 2   RSALVTGGASGLGRAAALALKARGYRVVVLDLRREGE-------------DLIYVEGDVT 48

Query: 108 KVDDCRSLVEETMNHFGRLDHLVNNAGISSVALFEDIVNIT--DFKQIMNINFWGSVYTT 165
           + +D R  V            +       +  +           F++++ +N  G+    
Sbjct: 49  REEDVRRAVARAQEEAPLFAVVSAAGVGLAEKILGKEGPHGLESFRRVLEVNLLGTFNVL 108

Query: 166 RFAVPH-------LRYTKGKIVVLSSAASWLTAPRMSFYNASKAALVLFFETLRVELGSD 218
           R A              +G IV  +S A++      + Y ASK  +V        EL   
Sbjct: 109 RLAAWAMRENPPDAEGQRGVIVNTASVAAFEGQIGQAAYAASKGGVVALTLPAARELAGW 168

Query: 219 VGVTI--VTPGFIESELTQG 236
            G+ +  V PG  ++ L QG
Sbjct: 169 -GIRVVTVAPGLFDTPLLQG 187

>d1snya_ c.2.1.2 (A:) Carbonyl reductase sniffer {Fruit fly (Drosophila melanogaster) [TaxId: 7227]} Length = 248

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Carbonyl reductase sniffer
species: Fruit fly (Drosophila melanogaster) [TaxId: 7227]

 Score = 99.0 bits (245), Expect = 1e-25
 Identities = 40/216 (18%), Positives = 78/216 (36%), Gaps = 23/216 (10%)

Query: 48  KVVIITGASSGIGEHLA---YEYARRGACLALCARREKSLEEVADTAREIGSPDVITIRA 104
             ++ITG + G+G  L        +    L    R  +  +E+ D A+     ++  +  
Sbjct: 3   NSILITGCNRGLGLGLVKALLNLPQPPQHLFTTCRNREQAKELEDLAKN--HSNIHILEI 60

Query: 105 DVSKVDDCRSLVEETMN--HFGRLDHLVNNAGISSVALFEDIVNITDFKQIMNINFWGSV 162
           D+   D    LV +         L+ L NNAGI+  +     V   +    +  N    +
Sbjct: 61  DLRNFDAYDKLVADIEGVTKDQGLNVLFNNAGIAPKSARITAVRSQELLDTLQTNTVVPI 120

Query: 163 YTTRFAVPHLRYTK------------GKIVVLSSAASWLTA---PRMSFYNASKAALVLF 207
              +  +P L+                 I+ +SS    +       M  Y  SK+AL   
Sbjct: 121 MLAKACLPLLKKAAKANESQPMGVGRAAIINMSSILGSIQGNTDGGMYAYRTSKSALNAA 180

Query: 208 FETLRVELGSD-VGVTIVTPGFIESELTQGKFLTGR 242
            ++L V+L    +    + PG++++++         
Sbjct: 181 TKSLSVDLYPQRIMCVSLHPGWVKTDMGGSSAPLDV 216

>d2o23a1 c.2.1.2 (A:6-253) Type II 3-hydroxyacyl-CoA dehydrogenase {Human (Homo sapiens) [TaxId: 9606]} Length = 248

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Type II 3-hydroxyacyl-CoA dehydrogenase
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 97.7 bits (242), Expect = 3e-25
 Identities = 35/201 (17%), Positives = 67/201 (33%), Gaps = 9/201 (4%)

Query: 45  VSGKVVIITGASSGIGEHLAYEYARRGACLALCARREKSLEEVADTAREIGSPDVITIRA 104
           V G V +ITG +SG+G   A     +GA   L        E  A             + +
Sbjct: 3   VKGLVAVITGGASGLGLATAERLVGQGASAVLLDLPNSGGEAQAKKLGNNCVFAPADVTS 62

Query: 105 DVSKVDDCRSLVEETMNH-FGRLDHLVNNAGISSVALFEDIVNITDFKQIMNINFWGSVY 163
           +            +            +  A  +          + DF++++++N  G+  
Sbjct: 63  EKDVQTALALAKGKFGRVDVAVNCAGIAVASKTYNLKKGQTHTLEDFQRVLDVNLMGTFN 122

Query: 164 TTRFAVPHLR-------YTKGKIVVLSSAASWLTAPRMSFYNASKAALVLFFETLRVELG 216
             R     +          +G I+  +S A++      + Y+ASK  +V     +  +L 
Sbjct: 123 VIRLVAGEMGQNEPDQGGQRGVIINTASVAAFEGQVGQAAYSASKGGIVGMTLPIARDLA 182

Query: 217 SD-VGVTIVTPGFIESELTQG 236
              + V  + PG   + L   
Sbjct: 183 PIGIRVMTIAPGLFGTPLLTS 203

>d1qsga_ c.2.1.2 (A:) Enoyl-ACP reductase {Escherichia coli [TaxId: 562]} Length = 258

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Enoyl-ACP reductase
species: Escherichia coli [TaxId: 562]

 Score = 96.9 bits (240), Expect = 7e-25
 Identities = 42/194 (21%), Positives = 81/194 (41%), Gaps = 10/194 (5%)

Query: 46  SGKVVIITGASS--GIGEHLAYEYARRGACLALCARREKSLEEVADTAREIGSPDVITIR 103
           SGK +++TG +S   I   +A    R GA LA   + +K    V + A ++GS   I ++
Sbjct: 4   SGKRILVTGVASKLSIAYGIAQAMHREGAELAFTYQNDKLKGRVEEFAAQLGS--DIVLQ 61

Query: 104 ADVSKVDDCRSLVEETMNHFGRLDHLVNNAGISSVALFE----DIVNITDFKQIMNINFW 159
            DV++     ++  E    + + D  V++ G +     +    + V    FK   +I+ +
Sbjct: 62  CDVAEDASIDTMFAELGKVWPKFDGFVHSIGFAPGDQLDGDYVNAVTREGFKIAHDISSY 121

Query: 160 GSVYTTRFAVPHLRYTKGKIVVLSSAASWLTAPRMSFYNASKAALVLFFETLRVELGSD- 218
             V   +     L      ++ LS   +    P  +    +KA+L      +   +G + 
Sbjct: 122 SFVAMAKACRSMLNPGSA-LLTLSYLGAERAIPNYNVMGLAKASLEANVRYMANAMGPEG 180

Query: 219 VGVTIVTPGFIESE 232
           V V  ++ G I + 
Sbjct: 181 VRVNAISAGPIRTL 194

>d1luaa1 c.2.1.7 (A:98-288) Methylene-tetrahydromethanopterin dehydrogenase {Methylobacterium extorquens [TaxId: 408]} Length = 191

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Aminoacid dehydrogenase-like, C-terminal domain
domain: Methylene-tetrahydromethanopterin dehydrogenase
species: Methylobacterium extorquens [TaxId: 408]

 Score = 84.6 bits (208), Expect = 1e-20
 Identities = 26/180 (14%), Positives = 48/180 (26%), Gaps = 17/180 (9%)

Query: 41  FSEDVSGKVVIITGASSGIGEHLAYEYARRGACLALCARREKSLEEVADTAREIGSPDVI 100
               V GK  ++   +  +G   A   A  GA + LC R+    +  AD+  +     V 
Sbjct: 17  AGGSVKGKKAVVLAGTGPVGMRSAALLAGEGAEVVLCGRKLDKAQAAADSVNKRF--KVN 74

Query: 101 TIRADVSKVDDCRSLVEETMNHFGRLDHLVNNAGISSVALFEDIVNITDFKQIMNINFWG 160
              A+ +                     +     I    L +       ++   +I    
Sbjct: 75  VTAAETADDASRA-------EAVKGAHFVFTAGAIGLELLPQA-----AWQNESSIEIVA 122

Query: 161 SVYTTRFAVPHLR--YTKGKIVVLSSAASWLTAPRMSFYNASKAALVLFFETLRVELGSD 218
                            KGK      A   L    +      +A +   FE+      ++
Sbjct: 123 DYNAQPPLGIGGIDATDKGKEYGGKRAFGALGIGGLK-LKLHRACIAKLFESSEGVFDAE 181

>d1fjha_ c.2.1.2 (A:) 3-alpha-hydroxysteroid dehydrogenase {Comamonas testosteroni [TaxId: 285]} Length = 257

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: 3-alpha-hydroxysteroid dehydrogenase
species: Comamonas testosteroni [TaxId: 285]

 Score = 80.7 bits (198), Expect = 7e-19
 Identities = 24/177 (13%), Positives = 50/177 (28%), Gaps = 40/177 (22%)

Query: 48  KVVIITGASSGIGEHLAYEYARRGACLALCARREKSLEEVADTAREIGSPDVITIRADVS 107
            +++I+G ++GIG          G  +     R+    EV                AD+S
Sbjct: 2   SIIVISGCATGIGAATRKVLEAAGHQIVGIDIRD---AEVI---------------ADLS 43

Query: 108 KVDDCRSLVEET-MNHFGRLDHLVNNAGIS-SVALFEDIVNITDFKQI------------ 153
             +  +  + +        +D LV  AG+     +  ++V++  F               
Sbjct: 44  TAEGRKQAIADVLAKCSKGMDGLVLCAGLGPQTKVLGNVVSVNYFGATELMDAFLPALKK 103

Query: 154 -------MNINFWGSVYTTRFAVPHLRYTKGKIVVLSSAASWLTAPRMSF-YNASKA 202
                  +  +   +          L    G+     +          +  Y  SK 
Sbjct: 104 GHQPAAVVISSVASAHLAFDKNPLALALEAGEEAKARAIVEHAGEQGGNLAYAGSKN 160

>d1e7wa_ c.2.1.2 (A:) Dihydropteridin reductase (pteridine reductase) {Leishmania major [TaxId: 5664]} Length = 284

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Dihydropteridin reductase (pteridine reductase)
species: Leishmania major [TaxId: 5664]

 Score = 80.9 bits (198), Expect = 1e-18
 Identities = 30/161 (18%), Positives = 47/161 (29%), Gaps = 31/161 (19%)

Query: 49  VVIITGASSGIGEHLAYEYARRGACLALCARREKS-LEEVADTAREIGSPDVITIRA--- 104
           V ++TGA+  +G  +A      G  + L   R  +    ++ T         IT++A   
Sbjct: 4   VALVTGAAKRLGRSIAEGLHAEGYAVCLHYHRSAAEANALSATLNARRPNSAITVQADLS 63

Query: 105 --------------DVSKVDDCRSLVEETMNHFGRLDHLVNNAGISSVALFEDI------ 144
                          V+    C  LV     H+GR D LVNNA                 
Sbjct: 64  NVATAPVSGADGSAPVTLFTRCAELVAACYTHWGRCDVLVNNASSFYPTPLLRNDEDGHE 123

Query: 145 -------VNITDFKQIMNINFWGSVYTTRFAVPHLRYTKGK 178
                     T    +   N     +  +     +  T  K
Sbjct: 124 PCVGDREAMETATADLFGSNAIAPYFLIKAFAHRVAGTPAK 164

>d2fr1a1 c.2.1.2 (A:1657-1915) Erythromycin synthase, eryAI, 1st ketoreductase module {Saccharopolyspora erythraea [TaxId: 1836]} Length = 259

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Erythromycin synthase, eryAI, 1st ketoreductase module
species: Saccharopolyspora erythraea [TaxId: 1836]

 Score = 75.4 bits (184), Expect = 6e-17
 Identities = 36/186 (19%), Positives = 57/186 (30%), Gaps = 7/186 (3%)

Query: 47  GKVVIITGASSGIGEHLAYEYARRGAC-LALCARREKSLEEVADTAREIGSPDVITIRAD 105
              V++TG + G+G  +A   ARRGA  L L +R     +   +   E+ +    T  A 
Sbjct: 9   TGTVLVTGGTGGVGGQIARWLARRGAPHLLLVSRSGPDADGAGELVAELEALGARTTVAA 68

Query: 106 VSKVDDCRSLVEETMNHFGRLDHLVNNAGISSVALFEDIVNITDFKQIMNINFWGSVYTT 165
               D                   V +A  +      D +     ++       G+    
Sbjct: 69  CDVTDRESVRELLGGIGDDVPLSAVFHAAATLDDGTVDTLTGERIERASRAKVLGARNLH 128

Query: 166 RFAVPHLRYTKGKIVVLSSAASWLTAPRMSFYNASKAALVLFFETLRVELGSDVGVTIVT 225
                         V+ SS AS   AP +  Y    A L    +  R +    +  T V 
Sbjct: 129 ELTREL---DLTAFVLFSSFASAFGAPGLGGYAPGNAYLDGLAQQRRSD---GLPATAVA 182

Query: 226 PGFIES 231
            G    
Sbjct: 183 WGTWAG 188

>d2pd4a1 c.2.1.2 (A:2-275) Enoyl-ACP reductase {Helicobacter pylori [TaxId: 210]} Length = 274

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Enoyl-ACP reductase
species: Helicobacter pylori [TaxId: 210]

 Score = 74.7 bits (182), Expect = 1e-16
 Identities = 43/196 (21%), Positives = 70/196 (35%), Gaps = 7/196 (3%)

Query: 46  SGKVVIITGASS--GIGEHLAYEYARRGACLALCARREKSLEEVADTAREIGSPDVITIR 103
            GK  +I G ++   I   +A     +GA LA     E   + V   A+E+         
Sbjct: 4   KGKKGLIVGVANNKSIAYGIAQSCFNQGATLAFTYLNESLEKRVRPIAQELN--SPYVYE 61

Query: 104 ADVSKVDDCRSLVEETMNHFGRLDHLVNNAGISSVALFEDIVNITDFKQIMNINF--WGS 161
            DVSK +  +SL        G LD +V++   +     E  +  T              S
Sbjct: 62  LDVSKEEHFKSLYNSVKKDLGSLDFIVHSVAFAPKEALEGSLLETSKSAFNTAMEISVYS 121

Query: 162 VYTTRFAVPHLRYTKGKIVVLSSAASWLTAPRMSFYNASKAALVLFFETLRVELGSD-VG 220
           +      +  L      ++ LS   S       +    +KAAL      L V+LG   + 
Sbjct: 122 LIELTNTLKPLLNNGASVLTLSYLGSTKYMAHYNVMGLAKAALESAVRYLAVDLGKHHIR 181

Query: 221 VTIVTPGFIESELTQG 236
           V  ++ G I +  + G
Sbjct: 182 VNALSAGPIRTLASSG 197

>d1jaya_ c.2.1.6 (A:) Coenzyme F420H2:NADP+ oxidoreductase (FNO) {Archaeon Archaeoglobus fulgidus [TaxId: 2234]} Length = 212

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: 6-phosphogluconate dehydrogenase-like, N-terminal domain
domain: Coenzyme F420H2:NADP+ oxidoreductase (FNO)
species: Archaeon Archaeoglobus fulgidus [TaxId: 2234]

 Score = 71.6 bits (174), Expect = 8e-16
 Identities = 25/185 (13%), Positives = 54/185 (29%), Gaps = 3/185 (1%)

Query: 48  KVVIITGASSGIGEHLAYEYARRGACLALCARREKSLEEVADTAREIGSPDVITIRADVS 107
           +V ++ G +  +G+ LA   A  G  + + +RRE+  E  A   R I   D         
Sbjct: 2   RVALLGG-TGNLGKGLALRLATLGHEIVVGSRREEKAEAKAAEYRRIA-GDASITGMKNE 59

Query: 108 KVDDCRSLVEETMNHFGRLDHLVNNAGISSVALFEDIVNITDFKQIMNINFWGSVYTTRF 167
              +   +   T+     +D   +   I    +    +                      
Sbjct: 60  DAAEACDIAVLTIPWEHAIDTARDLKNILREKIVVSPLVPVSRGAKGFTYSSERSAAEIV 119

Query: 168 AVPHLRYTKGKIVVLSSAASWLTAPRMSFYNASKAALVLFFETLRVELGSD-VGVTIVTP 226
           A           +    AA +        ++          + + + L S+  G+  +  
Sbjct: 120 AEVLESEKVVSALHTIPAARFANLDEKFDWDVPVCGDDDESKKVVMSLISEIDGLRPLDA 179

Query: 227 GFIES 231
           G + +
Sbjct: 180 GPLSN 184

>d1uh5a_ c.2.1.2 (A:) Enoyl-ACP reductase {Malaria parasite (Plasmodium falciparum) [TaxId: 5833]} Length = 329

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Enoyl-ACP reductase
species: Malaria parasite (Plasmodium falciparum) [TaxId: 5833]

 Score = 64.2 bits (154), Expect = 1e-12
 Identities = 24/227 (10%), Positives = 69/227 (30%), Gaps = 36/227 (15%)

Query: 46  SGKVVIITGA--SSGIGEHLAYEYARRGACLALCARREKSLEEVADTARE---------- 93
           +  +  I G   ++G G  +A E ++R   +            + +              
Sbjct: 1   NEDICFIAGIGDTNGYGWGIAKELSKRNVKIIFGIWPPVYNIFMKNYKNGKFDNDMIIDK 60

Query: 94  ---------------------IGSPDVITIRADVSKVDDCRSLVEETMNHFGRLDHLVNN 132
                                I        R ++ +      +       +G+++ LV++
Sbjct: 61  DKKMNILDMLPFDASFDTANDIDEETKNNKRYNMLQNYTIEDVANLIHQKYGKINMLVHS 120

Query: 133 AGISSVALFE-DIVNITDFKQIMNINFWGSVYTTRFAVPHLRYTKGKIVVLSSAASWLTA 191
              +     +    +   +   ++ + +  +   ++ V  ++     I +   A+  +  
Sbjct: 121 LANAKEVQKDLLNTSRKGYLDALSKSSYSLISLCKYFVNIMKPQSSIISLTYHASQKVVP 180

Query: 192 PRMSFYNASKAALVLFFETLRVELGSDVG--VTIVTPGFIESELTQG 236
                 +++KAAL      L   LG +    +  ++ G ++S     
Sbjct: 181 GYGGGMSSAKAALESDTRVLAYHLGRNYNIRINTISAGPLKSRAATA 227

>d2h7ma1 c.2.1.2 (A:2-269) Enoyl-ACP reductase {Mycobacterium tuberculosis, TB, gene InhA [TaxId: 1773]} Length = 268

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Enoyl-ACP reductase
species: Mycobacterium tuberculosis, TB, gene InhA [TaxId: 1773]

 Score = 59.8 bits (143), Expect = 3e-11
 Identities = 33/198 (16%), Positives = 61/198 (30%), Gaps = 5/198 (2%)

Query: 46  SGKVVIITGA--SSGIGEHLAYEYARRGACLALCARREKSLEEVADTAREIGSPDVITIR 103
            GK ++++G    S I  H+A     +GA L L       L +         +P +    
Sbjct: 5   DGKRILVSGIITDSSIAFHIARVAQEQGAQLVLTGFDRLRLIQRITDRLPAKAPLLELDV 64

Query: 104 ADVSKVDDCRSLVEETMNHFGRLDHLVNNAGIS--SVALFEDIVNITDFKQIMNINFWGS 161
            +   +      V E +    +LD +V++ G    +        +         I+    
Sbjct: 65  QNEEHLASLAGRVTEAIGAGNKLDGVVHSIGFMPQTGMGINPFFDAPYADVSKGIHISAY 124

Query: 162 VYTTRFAVPHLRYTKGKIVVLSSAASWLTAPRMSFYNASKAALVLFFETLRVELGSD-VG 220
            Y +           G  +V          P  ++   +K+AL      +  E G   V 
Sbjct: 125 SYASMAKALLPIMNPGGSIVGMDFDPSRAMPAYNWMTVAKSALESVNRFVAREAGKYGVR 184

Query: 221 VTIVTPGFIESELTQGKF 238
             +V  G I +       
Sbjct: 185 SNLVAAGPIRTLAMSAIV 202

>d1d7oa_ c.2.1.2 (A:) Enoyl-ACP reductase {Oil seed rape (Brassica napus) [TaxId: 3708]} Length = 297

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Enoyl-ACP reductase
species: Oil seed rape (Brassica napus) [TaxId: 3708]

 Score = 58.6 bits (140), Expect = 8e-11
 Identities = 26/187 (13%), Positives = 41/187 (21%), Gaps = 33/187 (17%)

Query: 44  DVSGKVVIITGASS--GIGEHLAYEYARRGACLALCARREKSLEEVADTARE-------- 93
           D+ GK   I G +   G G  +A   A  GA + +               R         
Sbjct: 5   DLRGKRAFIAGIADDNGYGWAVAKSLAAAGAEILVGTWVPALNIFETSLRRGKFDQSRVL 64

Query: 94  -----------------------IGSPDVITIRADVSKVDDCRSLVEETMNHFGRLDHLV 130
                                  +        R   S     +   E     FG +D LV
Sbjct: 65  PDGSLMEIKKVYPLDAVFDNPEDVPEDVKANKRYAGSSNWTVQEAAECVRQDFGSIDILV 124

Query: 131 NNAGISSVALFEDIVNITDFKQIMNINFWGSVYTTRFAVPHLRYTKGKIVVLSSAASWLT 190
           ++           +                S  +       +    G  + L+  AS   
Sbjct: 125 HSLANGPEVSKPLLETSRKGYLAAISASSYSFVSLLSHFLPIMNPGGASISLTYIASERI 184

Query: 191 APRMSFY 197
            P     
Sbjct: 185 IPGYGGG 191

>d1t2aa_ c.2.1.2 (A:) GDP-mannose 4,6-dehydratase {Human (Homo sapiens) [TaxId: 9606]} Length = 347

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: GDP-mannose 4,6-dehydratase
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 45.0 bits (105), Expect = 3e-06
 Identities = 23/172 (13%), Positives = 50/172 (29%), Gaps = 26/172 (15%)

Query: 48  KVVIITGASSGIGEHLAYEYARRGACLALCARREKS-----LEEVADTAREIGSPDVITI 102
            V +ITG +   G +LA     +G  +    RR  S     +E +    +     ++   
Sbjct: 2   NVALITGITGQDGSYLAEFLLEKGYEVHGIVRRSSSFNTGRIEHLYKNPQAHIEGNMKLH 61

Query: 103 RADVSKVDDCRSLVEETMNHFGRLDHLVNNAGISSVALFEDIVNITDFKQIMNINFWGSV 162
             D++       ++ E            ++  IS              +   +++  G++
Sbjct: 62  YGDLTDSTCLVKIINEVKPTEIYNLGAQSHVKIS----------FDLAEYTADVDGVGTL 111

Query: 163 YTTRFAVPHLRYTKGKIVVLSSAASWLTAPRM-----------SFYNASKAA 203
                          K    S++  +     +           S Y A+K  
Sbjct: 112 RLLDAVKTCGLINSVKFYQASTSELYGKVQEIPQKETTPFYPRSPYGAAKLY 163

>d1z45a2 c.2.1.2 (A:11-357) Uridine diphosphogalactose-4-epimerase (UDP-galactose 4-epimerase) {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]} Length = 347

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Uridine diphosphogalactose-4-epimerase (UDP-galactose 4-epimerase)
species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]

 Score = 39.6 bits (91), Expect = 2e-04
 Identities = 27/209 (12%), Positives = 55/209 (26%), Gaps = 14/209 (6%)

Query: 48  KVVIITGASSGIGEHLAYEYARRGACLALCARREKSLEEVADTAREIGSPDVITIRADVS 107
           K+V++TG +  IG H   E    G    +      S  +       +    +     D+ 
Sbjct: 2   KIVLVTGGAGYIGSHTVVELIENGYDCVVADNLSNSTYDSVARLEVLTKHHIPFYEVDLC 61

Query: 108 KVDDCRSLVEETMNHFGRLDHLVNNAGISSVALFEDIVNITDFKQIMNINFWGSVYTTRF 167
                     E +    ++D +++ AG+ +V     I        I+           ++
Sbjct: 62  DRKGL-----EKVFKEYKIDSVIHFAGLKAVGESTQIPLRYYHNNIL-GTVVLLELMQQY 115

Query: 168 AVPHLRYTKGKIVVLSSAASWLTAPRM--------SFYNASKAALVLFFETLRVELGSDV 219
            V    ++    V   +       P          + Y  +K A+      L        
Sbjct: 116 NVSKFVFSSSATVYGDATRFPNMIPIPEECPLGPTNPYGHTKYAIENILNDLYNSDKKSW 175

Query: 220 GVTIVTPGFIESELTQGKFLTGRRQNSDR 248
              I+           G          + 
Sbjct: 176 KFAILRYFNPIGAHPSGLIGEDPLGIPNN 204

>d1y1pa1 c.2.1.2 (A:2-343) Aldehyde reductase II {Sporobolomyces salmonicolor [TaxId: 5005]} Length = 342

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Aldehyde reductase II
species: Sporobolomyces salmonicolor [TaxId: 5005]

 Score = 39.0 bits (89), Expect = 3e-04
 Identities = 13/78 (16%), Positives = 27/78 (34%), Gaps = 1/78 (1%)

Query: 47  GKVVIITGASSGIGEHLAYEYARRGACLALCARREKSLEEVADTAREIGSPDVIT-IRAD 105
           G +V++TGA+  +  H+  +    G  +   AR    L  +             T +  D
Sbjct: 11  GSLVLVTGANGFVASHVVEQLLEHGYKVRGTARSASKLANLQKRWDAKYPGRFETAVVED 70

Query: 106 VSKVDDCRSLVEETMNHF 123
           + K      +++      
Sbjct: 71  MLKQGAYDEVIKGAAGVA 88

>d1udca_ c.2.1.2 (A:) Uridine diphosphogalactose-4-epimerase (UDP-galactose 4-epimerase) {Escherichia coli [TaxId: 562]} Length = 338

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Uridine diphosphogalactose-4-epimerase (UDP-galactose 4-epimerase)
species: Escherichia coli [TaxId: 562]

 Score = 38.8 bits (89), Expect = 4e-04
 Identities = 24/135 (17%), Positives = 47/135 (34%), Gaps = 14/135 (10%)

Query: 50  VIITGASSGIGEHLAYEYARRGACLALCARREKSLEEVADTAREIGSPDVITIRADVSKV 109
           V++TG S  IG H   +  + G  + +      S   V      +G      +  D+   
Sbjct: 3   VLVTGGSGYIGSHTCVQLLQNGHDVIILDNLCNSKRSVLPVIERLGGKHPTFVEGDIRNE 62

Query: 110 DDCRSLVEETMNHFGRLDHLVNNAGISSVALFEDIVNITDFKQIMNINFWGSVYTTRFAV 169
                +      H   +D +++ AG+ +V       ++    +  + N  G    T   +
Sbjct: 63  ALMTEI-----LHDHAIDTVIHFAGLKAVGE-----SVQKPLEYYDNNVNG----TLRLI 108

Query: 170 PHLRYTKGKIVVLSS 184
             +R    K  + SS
Sbjct: 109 SAMRAANVKNFIFSS 123

>d1db3a_ c.2.1.2 (A:) GDP-mannose 4,6-dehydratase {Escherichia coli [TaxId: 562]} Length = 357

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: GDP-mannose 4,6-dehydratase
species: Escherichia coli [TaxId: 562]

 Score = 37.5 bits (86), Expect = 0.001
 Identities = 30/172 (17%), Positives = 56/172 (32%), Gaps = 27/172 (15%)

Query: 48  KVVIITGASSGIGEHLAYEYARRGACLALCARREKSLE----EVADTAREIGSPDVITIR 103
           KV +ITG +   G +LA     +G  +    RR  S      +         +P      
Sbjct: 2   KVALITGVTGQDGSYLAEFLLEKGYEVHGIKRRASSFNTERVDHIYQDPHTCNPKFHLHY 61

Query: 104 ADVSKVDDCRSLVEETMNHFGRLDHLVNNAGISSVALFEDIVNITDFKQIMNINFWGSVY 163
            D+S   +   ++ E      + D + N   +S VA     V+    +   +++  G++ 
Sbjct: 62  GDLSDTSNLTRILREV-----QPDEVYNLGAMSHVA-----VSFESPEYTADVDAMGTLR 111

Query: 164 TTRFAVPHLRYTKGKIVVLSSAA------------SWLTAPRMSFYNASKAA 203
                       K +    S++             +    PR S Y  +K  
Sbjct: 112 LLEAIRFLGLEKKTRFYQASTSELYGLVQEIPQKETTPFYPR-SPYAVAKLY 162

>d1kewa_ c.2.1.2 (A:) dTDP-glucose 4,6-dehydratase (RmlB) {Streptococcus suis, serotype 2 [TaxId: 1307]} Length = 361

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: dTDP-glucose 4,6-dehydratase (RmlB)
species: Streptococcus suis, serotype 2 [TaxId: 1307]

 Score = 36.3 bits (83), Expect = 0.002
 Identities = 26/181 (14%), Positives = 54/181 (29%), Gaps = 37/181 (20%)

Query: 50  VIITGASSGIGEHLAYEYARRGACLALCARREKSLEEVADTAREIGSPDVITIRADVSKV 109
           ++ITG +  IG  +     +      +   +      +   +    S       AD+   
Sbjct: 3   ILITGGAGFIGSAVVRHIIKNTQDTVVNIDKLTYAGNLESLSDISESNRYNFEHADICDS 62

Query: 110 DDCRSLVEETMNHFGRLDHLVNNAGISSVALFEDIVNITDFKQIMNINFWGSVYTTRFA- 168
            +   + E+      + D +++ A  S V       +IT     +  N  G+      A 
Sbjct: 63  AEITRIFEQ-----YQPDAVMHLAAESHVD-----RSITGPAAFIETNIVGTYALLEVAR 112

Query: 169 -----VPHLRYTKGKIVVLSSAASWLTAPRM---------------------SFYNASKA 202
                +   +    +   +S+   +   P                       S Y+ASKA
Sbjct: 113 KYWSALGEDKKNNFRFHHISTDEVYGDLPHPDEVENSVTLPLFTETTAYAPSSPYSASKA 172

Query: 203 A 203
           +
Sbjct: 173 S 173

>d1rkxa_ c.2.1.2 (A:) CDP-glucose-4,6-dehydratase {Yersinia pseudotuberculosis [TaxId: 633]} Length = 356

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: CDP-glucose-4,6-dehydratase
species: Yersinia pseudotuberculosis [TaxId: 633]

 Score = 35.6 bits (80), Expect = 0.004
 Identities = 17/99 (17%), Positives = 34/99 (34%), Gaps = 6/99 (6%)

Query: 38  NSIFSEDVSGKVVIITGASSGIGEHLAYEYARRGACLALCARREKSLEEVADTAREIGSP 97
           NS +     GK V +TG +   G  L+      GA +   +    ++  + +TAR   + 
Sbjct: 3   NSFWQ----GKRVFVTGHTGFKGGWLSLWLQTMGATVKGYSLTAPTVPSLFETARV--AD 56

Query: 98  DVITIRADVSKVDDCRSLVEETMNHFGRLDHLVNNAGIS 136
            + +   D+   +     + E                +S
Sbjct: 57  GMQSEIGDIRDQNKLLESIREFQPEIVFHMAAQPLVRLS 95

Homologous Domains Detected by HHsearch

Original result of HHsearch against SCOP70(version1.75) database

ID	Length	Definition	Probability
Query	248
d1vl8a_	251	Gluconate 5-dehydrogenase {Thermotoga maritima [Ta	100.0
d1x1ta1	260	D(-)-3-hydroxybutyrate dehydrogenase {Pseudomonas	100.0
d1iy8a_	258	Levodione reductase {Corynebacterium aquaticum [Ta	100.0
d1fmca_	255	7-alpha-hydroxysteroid dehydrogenase {Escherichia	100.0
d2ew8a1	247	(s)-1-phenylethanol dehydrogenase {Azoarcus sp. eb	100.0
d1q7ba_	243	beta-keto acyl carrier protein reductase {Escheric	100.0
d1nffa_	244	Putative oxidoreductase Rv2002 {Mycobacterium tube	100.0
d2c07a1	251	beta-keto acyl carrier protein reductase {Malaria	100.0
d1xq1a_	259	Tropinone reductase {Thale cress (Arabidopsis thal	100.0
d1hdca_	254	3-alpha,20-beta-hydroxysteroid dehydrogenase {Stre	100.0
d1zema1	260	Xylitol dehydrogenase {Gluconobacter oxydans [TaxI	100.0
d2ae2a_	259	Tropinone reductase {Jimsonweed (Datura stramonium	100.0
d1geea_	261	Glucose dehydrogenase {Bacillus megaterium [TaxId:	100.0
d1ydea1	250	Retinal dehydrogenase/reductase 3 {Human (Homo sap	100.0
d2rhca1	257	beta-keto acyl carrier protein reductase {Streptom	100.0
d2bd0a1	240	Bacterial sepiapterin reductase {Chlorobium tepidu	100.0
d1zk4a1	251	R-specific alcohol dehydrogenase {Lactobacillus br	100.0
d1k2wa_	256	Sorbitol dehydrogenase {Rhodobacter sphaeroides [T	100.0
d1ulsa_	242	beta-keto acyl carrier protein reductase {Thermus	100.0
d1gega_	255	meso-2,3-butanediol dehydrogenase {Klebsiella pneu	100.0
d1yb1a_	244	17-beta-hydroxysteroid dehydrogenase type XI {Huma	100.0
d2d1ya1	248	Hypothetical protein TTHA0369 {Thermus thermophilu	100.0
d1hxha_	253	3beta/17beta hydroxysteroid dehydrogenase {Comamon	100.0
d1edoa_	244	beta-keto acyl carrier protein reductase {Oil seed	100.0
d1spxa_	264	Glucose dehydrogenase (5l265) {Nematode (Caenorhab	100.0
d1xkqa_	272	Hypothetical protein R05D8.7 {Caenorhabditis elega	100.0
d1bdba_	276	Cis-biphenyl-2,3-dihydrodiol-2,3-dehydrogenase {Ps	100.0
d2bgka1	268	Rhizome secoisolariciresinol dehydrogenase {Mayapp	100.0
d1ae1a_	258	Tropinone reductase {Jimsonweed (Datura stramonium	100.0
d1uzma1	237	beta-keto acyl carrier protein reductase {Mycobact	100.0
d1xhla_	274	Hypothetical protein F25D1.5 {Caenorhabditis elega	100.0
d1h5qa_	260	Mannitol dehydrogenase {Mushroom (Agaricus bisporu	100.0
d1cyda_	242	Carbonyl reductase {Mouse (Mus musculus) [TaxId: 1	100.0
d1pr9a_	244	Carbonyl reductase {Human (Homo sapiens) [TaxId: 9	100.0
d1yxma1	297	Peroxisomal trans 2-enoyl CoA reductase {Human (Ho	100.0
d2gdza1	254	15-hydroxyprostaglandin dehydrogenase, PGDH {Human	100.0
d1xg5a_	257	Putative dehydrogenase ARPG836 (MGC4172) {Human (H	100.0
d1sbya1	254	Drosophila alcohol dehydrogenase {Fly (Drosophila	100.0
d1ja9a_	259	1,3,6,8-tetrahydroxynaphthalene reductase {Rice bl	100.0
d1gz6a_	302	(3R)-hydroxyacyl-CoA dehydrogenase domain of estra	100.0
d1oaaa_	259	Sepiapterin reductase {Mouse (Mus musculus) [TaxId	100.0
d1zmta1	252	Halohydrin dehalogenase HheC {Agrobacterium tumefa	100.0
d1xu9a_	269	11-beta-hydroxysteroid dehydrogenase 1 {Human (Hom	100.0
d2a4ka1	241	beta-keto acyl carrier protein reductase {Thermus	100.0
d1ulua_	256	Enoyl-ACP reductase {Thermus thermophilus [TaxId:	100.0
d1g0oa_	272	1,3,8-trihydroxynaphtalene reductase (THNR, naphto	100.0
d1snya_	248	Carbonyl reductase sniffer {Fruit fly (Drosophila	100.0
d1wmaa1	275	Carbonyl reductase/20beta-hydroxysteroid dehydroge	100.0
d1o5ia_	234	beta-keto acyl carrier protein reductase {Thermoto	100.0
d1w6ua_	294	2,4-dienoyl-CoA reductase, mitochondrial (DECR) {H	100.0
d1jtva_	285	Human estrogenic 17beta-hydroxysteroid dehydrogena	100.0
d2ag5a1	245	Dehydrogenase/reductase SDR family member 6, DHRS6	100.0
d1yo6a1	250	Putative carbonyl reductase sniffer {Caenorhabditi	100.0
d2o23a1	248	Type II 3-hydroxyacyl-CoA dehydrogenase {Human (Ho	100.0
d1dhra_	236	Dihydropteridin reductase (pteridine reductase) {R	100.0
d1ooea_	235	Dihydropteridin reductase (pteridine reductase) {N	100.0
d1qsga_	258	Enoyl-ACP reductase {Escherichia coli [TaxId: 562]	100.0
d1uh5a_	329	Enoyl-ACP reductase {Malaria parasite (Plasmodium	100.0
d1e7wa_	284	Dihydropteridin reductase (pteridine reductase) {L	100.0
d2pd4a1	274	Enoyl-ACP reductase {Helicobacter pylori [TaxId: 2	100.0
d1d7oa_	297	Enoyl-ACP reductase {Oil seed rape (Brassica napus	100.0
d2h7ma1	268	Enoyl-ACP reductase {Mycobacterium tuberculosis, T	100.0
d1uaya_	241	Type II 3-hydroxyacyl-CoA dehydrogenase {Thermus t	100.0
d1mxha_	266	Dihydropteridin reductase (pteridine reductase) {T	100.0
d2fr1a1	259	Erythromycin synthase, eryAI, 1st ketoreductase mo	99.97
d1fjha_	257	3-alpha-hydroxysteroid dehydrogenase {Comamonas te	99.95
d1luaa1	191	Methylene-tetrahydromethanopterin dehydrogenase {M	99.83
d1db3a_	357	GDP-mannose 4,6-dehydratase {Escherichia coli [Tax	99.83
d1z45a2	347	Uridine diphosphogalactose-4-epimerase (UDP-galact	99.78
d1udca_	338	Uridine diphosphogalactose-4-epimerase (UDP-galact	99.77
d1i24a_	393	Sulfolipid biosynthesis protein SQD1 {Thale cress	99.77
d1y1pa1	342	Aldehyde reductase II {Sporobolomyces salmonicolor	99.75
d1t2aa_	347	GDP-mannose 4,6-dehydratase {Human (Homo sapiens)	99.75
d1kewa_	361	dTDP-glucose 4,6-dehydratase (RmlB) {Streptococcus	99.71
d1n7ha_	339	GDP-mannose 4,6-dehydratase {Thale-cress (Arabidop	99.71
d1sb8a_	341	UDP-N-acetylglucosamine 4-epimerase WbpP {Pseudomo	99.67
d1ek6a_	346	Uridine diphosphogalactose-4-epimerase (UDP-galact	99.67
d1rpna_	321	GDP-mannose 4,6-dehydratase {Pseudomonas aeruginos	99.66
d1orra_	338	CDP-tyvelose-2-epimerase {Salmonella typhi [TaxId:	99.66
d1rkxa_	356	CDP-glucose-4,6-dehydratase {Yersinia pseudotuberc	99.66
d1e6ua_	315	GDP-4-keto-6-deoxy-d-mannose epimerase/reductase (	99.65
d1oc2a_	346	dTDP-glucose 4,6-dehydratase (RmlB) {Streptococcus	99.64
d2b69a1	312	UDP-glucuronate decarboxylase 1 {Human (Homo sapie	99.63
d2blla1	342	Polymyxin resistance protein ArnA (PrmI) {Escheric	99.61
d2c5aa1	363	GDP-mannose-3', 5'-epimerase {Thale cress (Arabido	99.59
d1gy8a_	383	Uridine diphosphogalactose-4-epimerase (UDP-galact	99.58
d1hdoa_	205	Biliverdin IX beta reductase {Human (Homo sapiens)	99.58
d1r6da_	322	dTDP-glucose 4,6-dehydratase (RmlB) {Streptomyces	99.5
d2bkaa1	232	TAT-interacting protein TIP30 {Human (Homo sapiens	99.47
d2q46a1	252	Hypothetical protein At5g02240 (T7H20_290) {Thale	99.37
d1n2sa_	298	dTDP-6-deoxy-L-lyxo-4-hexulose reductase (RmlD) {S	99.27
d1vl0a_	281	DTDP-4-dehydrorhamnose reductase RfbD {Clostridium	99.22
d1qyda_	312	Pinoresinol-lariciresinol reductase {Giant arborvi	99.12
d1qyca_	307	Phenylcoumaran benzylic ether reductase {Loblolly	99.11
d2a35a1	212	Hypothetical protein PA4017 {Pseudomonas aeruginos	99.1
d1jaya_	212	Coenzyme F420H2:NADP+ oxidoreductase (FNO) {Archae	99.01
d1eq2a_	307	ADP-L-glycero-D-mannoheptose 6-epimerase {Escheric	98.99
d1xgka_	350	Negative transcriptional regulator NmrA {Aspergill	98.98
d1vi2a1	182	Putative shikimate dehydrogenase YdiB {Escherichia	98.26
d1gpja2	159	Glutamyl tRNA-reductase middle domain {Archaeon Me	98.07
d1e5qa1	182	Saccharopine reductase {Rice blast fungus (Magnapo	98.06
d1v3va2	182	Leukotriene b4 12-hydroxydehydrogenase/prostagland	97.95
d1nyta1	170	Shikimate 5-dehydrogenase AroE {Escherichia coli [	97.92
d1yb5a2	174	Quinone oxidoreductase {Human (Homo sapiens) [TaxI	97.91
d1lssa_	132	Ktn Mja218 {Archaeon Methanococcus jannaschii [Tax	97.88
d1e3ja2	170	Ketose reductase (sorbitol dehydrogenase) {Silverl	97.85
d1xa0a2	176	B. subtilis YhfP homologue {Bacillus stearothermop	97.84
d1gu7a2	189	2,4-dienoyl-CoA reductase {Yeast (Candida tropical	97.81
d1p77a1	171	Shikimate 5-dehydrogenase AroE {Haemophilus influe	97.78
d1pqwa_	183	Putative enoyl reductase domain of polyketide synt	97.77
d1qora2	179	Quinone oxidoreductase {Escherichia coli [TaxId: 5	97.72
d1u7za_	223	Coenzyme A biosynthesis bifunctional protein CoaBC	97.63
d1ez4a1	146	Lactate dehydrogenase {Lactobacillus pentosus [Tax	97.6
d1o8ca2	77	Hypothetical protein YhdH {Escherichia coli [TaxId	97.57
d1iz0a2	171	Quinone oxidoreductase {Thermus thermophilus [TaxI	97.54
d1y7ta1	154	Malate dehydrogenase {Thermus thermophilus [TaxId:	97.49
d7mdha1	175	Malate dehydrogenase {Sorghum (Sorghum vulgare), c	97.46
d1ldna1	148	Lactate dehydrogenase {Bacillus stearothermophilus	97.41
d1vj0a2	182	Hypothetical protein TM0436 {Thermotoga maritima [	97.34
d2hmva1	134	Ktn bsu222 {Bacillus subtilis [TaxId: 1423]}	97.28
d1npya1	167	Shikimate 5-dehydrogenase-like protein HI0607 {Hae	97.28
d1jvba2	170	Alcohol dehydrogenase {Archaeon Sulfolobus solfata	97.28
d1pl8a2	171	Ketose reductase (sorbitol dehydrogenase) {Human (	97.26
d2ldxa1	159	Lactate dehydrogenase {Mouse (Mus musculus) [TaxId	97.19
d1hyha1	146	L-2-hydroxyisocapronate dehydrogenase, L-HICDH {La	97.15
d1mlda1	144	Malate dehydrogenase {Pig (Sus scrofa) [TaxId: 982	97.15
d2jhfa2	176	Alcohol dehydrogenase {Horse (Equus caballus) [Tax	97.14
d1hyea1	145	MJ0490, lactate/malate dehydrogenase {Archaeon Met	97.13
d1vj1a2	187	Putative zinc-binding alcohol dehydrogenase {Mouse	97.1
d1i0za1	160	Lactate dehydrogenase {Human (Homo sapiens), heart	97.07
d1id1a_	153	Rck domain from putative potassium channel Kch {Es	97.06
d1jqba2	174	Bacterial secondary alcohol dehydrogenase {Clostri	97.02
d1o6za1	142	Malate dehydrogenase {Archaeon Haloarcula marismor	96.95
d1y6ja1	142	Lactate dehydrogenase {Clostridium thermocellum [T	96.95
d1tt7a2	167	Hypothetical protein YhfP {Bacillus subtilis [TaxI	96.94
d2pv7a2	152	Prephenate dehydrogenase TyrA {Haemophilus influen	96.94
d1o89a2	177	Hypothetical protein YhdH {Escherichia coli [TaxId	96.93
d2cmda1	145	Malate dehydrogenase {Escherichia coli [TaxId: 562	96.92
d1pzga1	154	Lactate dehydrogenase {Toxoplasma gondii [TaxId: 5	96.91
d1nvta1	177	Shikimate 5-dehydrogenase AroE {Archaeon Methanoco	96.9
d1d1ta2	176	Alcohol dehydrogenase {Human (Homo sapiens), diffe	96.88
d1uufa2	168	Hypothetical protein YahK {Escherichia coli [TaxId	96.88
d2jfga1	93	UDP-N-acetylmuramoyl-L-alanine:D-glutamate ligase	96.87
d2fzwa2	176	Alcohol dehydrogenase {Human (Homo sapiens), diffe	96.82
d2f1ka2	165	Prephenate dehydrogenase TyrA {Synechocystis sp. p	96.81
d1pjqa1	113	Siroheme synthase CysG, domain 1 {Salmonella typhi	96.78
d1p0fa2	174	Alcohol dehydrogenase {Frog (Rana perezi) [TaxId:	96.77
d1bg6a2	184	N-(1-D-carboxylethyl)-L-norvaline dehydrogenase {A	96.76
d1f8fa2	174	Benzyl alcohol dehydrogenase {Acinetobacter calcoa	96.75
d1llua2	166	Alcohol dehydrogenase {Pseudomonas aeruginosa [Tax	96.71
d1llda1	143	Lactate dehydrogenase {Bifidobacterium longum, str	96.69
d1a5za1	140	Lactate dehydrogenase {Thermotoga maritima [TaxId:	96.65
d1guza1	142	Malate dehydrogenase {Chlorobium vibrioforme [TaxI	96.54
d1piwa2	168	Cinnamyl alcohol dehydrogenase, ADH6 {Baker's yeas	96.53
d1cdoa2	175	Alcohol dehydrogenase {Cod (Gadus callarias) [TaxI	96.5
d1kyqa1	150	Bifunctional dehydrogenase/ferrochelatase Met8p, N	96.48
d1t2da1	150	Lactate dehydrogenase {Malaria parasite (Plasmodiu	96.47
d1uxja1	142	Malate dehydrogenase {Chloroflexus aurantiacus [Ta	96.42
d1f0ya2	192	Short chain L-3-hydroxyacyl CoA dehydrogenase {Hum	96.39
d1kola2	195	Formaldehyde dehydrogenase {Pseudomonas putida [Ta	96.38
d1ojua1	142	Malate dehydrogenase {Archaeon Archaeoglobus fulgi	96.38
d1h2ba2	172	Alcohol dehydrogenase {Archaeon Aeropyrum pernix [	96.35
d1rjwa2	168	Alcohol dehydrogenase {Bacillus stearothermophilus	96.28
d1wxxa2	318	Hypothetical protein TTHA1280, middle and C-termin	96.28
d2pgda2	176	6-phosphogluconate dehydrogenase {Sheep (Ovis orie	96.27
d1e3ia2	174	Alcohol dehydrogenase {Mouse (Mus musculus), class	96.27
d5mdha1	154	Malate dehydrogenase {Pig (Sus scrofa) [TaxId: 982	96.22
d1jw9b_	247	Molybdenum cofactor biosynthesis protein MoeB {Esc	96.17
d1wdka3	186	Fatty oxidation complex alpha subunit, middle doma	96.05
d1ygya1	184	Phosphoglycerate dehydrogenase {Mycobacterium tube	95.94
d1c1da1	201	Phenylalanine dehydrogenase {Rhodococcus sp., M4 [	95.82
d2fy8a1	129	Potassium channel-related protein MthK {Archaeon M	95.81
d1vpda2	161	Hydroxyisobutyrate dehydrogenase {Salmonella typhi	95.61
d1gdha1	191	D-glycerate dehydrogenase {Hyphomicrobium methylov	95.49
d1dxya1	199	D-2-hydroxyisocaproate dehydrogenase {Lactobacillu	95.44
d1wy7a1	201	Hypothetical protein PH1948 {Archaeon Pyrococcus h	95.29
d1j4aa1	197	D-lactate dehydrogenase {Lactobacillus helveticus	95.29
d2fr1a2	209	Erythromycin synthase, eryAI, 1st ketoreductase mo	95.2
d1pjza_	201	Thiopurine S-methyltransferase {Pseudomonas syring	95.16
d2naca1	188	Formate dehydrogenase {Pseudomonas sp., strain 101	95.05
d1ne2a_	197	Hypothetical protein Ta1320 {Archaeon Thermoplasma	95.01
d1yovb1	426	UBA3 {Human (Homo sapiens) [TaxId: 9606]}	95.0
d2g5ca2	171	Prephenate dehydrogenase TyrA {Aquifex aeolicus [T	94.99
d1mx3a1	193	Transcription corepressor CtbP {Human (Homo sapien	94.98
d1edza1	171	Methylenetetrahydrofolate dehydrogenase/cyclohydro	94.95
d3cuma2	162	Hydroxyisobutyrate dehydrogenase {Pseudomonas aeru	94.94
d1kjqa2	111	Glycinamide ribonucleotide transformylase PurT, N-	94.9
d1ks9a2	167	Ketopantoate reductase PanE {Escherichia coli [Tax	94.82
d1y8ca_	246	Putative methyltransferase CAC2371 {Clostridium ac	94.79
d1ebda2	117	Dihydrolipoamide dehydrogenase {Bacillus stearothe	94.72
d1pgja2	178	6-phosphogluconate dehydrogenase {Trypanosoma bruc	94.62
d1yl7a1	135	Dihydrodipicolinate reductase {Mycobacterium tuber	94.59
d1nv8a_	271	N5-glutamine methyltransferase, HemK {Thermotoga m	94.59
d3lada2	119	Dihydrolipoamide dehydrogenase {Azotobacter vinela	94.56
d1vm6a3	128	Dihydrodipicolinate reductase {Thermotoga maritima	94.54
d2as0a2	324	Hypothetical protein PH1915, middle and C-terminal	94.53
d1leha1	230	Leucine dehydrogenase {Bacillus sphaericus [TaxId:	94.38
d1nhpa2	123	NADH peroxidase {Enterococcus faecalis [TaxId: 135	94.37
d1v59a2	122	Dihydrolipoamide dehydrogenase {Baker's yeast (Sac	94.37
d2igta1	309	Putative methyltransferase Atu0340 {Agrobacterium	94.35
d1b0aa1	166	Methylenetetrahydrofolate dehydrogenase/cyclohydro	94.34
d1li4a1	163	S-adenosylhomocystein hydrolase {Human (Homo sapie	94.24
d1d7ya2	121	NADH-dependent ferredoxin reductase, BphA4 {Pseudo	94.2
d3grsa2	125	Glutathione reductase {Human (Homo sapiens) [TaxId	94.07
d1a4ia1	170	Methylenetetrahydrofolate dehydrogenase/cyclohydro	94.04
d1xhca2	122	NADH oxidase /nitrite reductase {Pyrococcus furios	93.92
d1gesa2	116	Glutathione reductase {Escherichia coli [TaxId: 56	93.88
d1onfa2	117	Glutathione reductase {Plasmodium falciparum [TaxI	93.86
d1sc6a1	188	Phosphoglycerate dehydrogenase {Escherichia coli [	93.83
d1c0pa1	268	D-aminoacid oxidase, N-terminal domain {Rhodotorul	93.71
d2ahra2	152	Pyrroline-5-carboxylate reductase ProC {Streptococ	93.69
d1yqga2	152	Pyrroline-5-carboxylate reductase ProC {Neisseria	93.66
d1jg1a_	215	Protein-L-isoaspartyl O-methyltransferase {Archaeo	93.6
d2esra1	152	Putative methyltransferase SPy1538 {Streptococcus	93.56
d1lvla2	115	Dihydrolipoamide dehydrogenase {Pseudomonas putida	93.53
d2fyta1	311	Protein arginine N-methyltransferase 3, PRMT3 {Hum	93.53
d1pjca1	168	L-alanine dehydrogenase {Phormidium lapideum [TaxI	93.51
d1dl5a1	213	Protein-L-isoaspartyl O-methyltransferase {Thermot	93.48
d1u8xx1	167	Maltose-6'-phosphate glucosidase GlvA {Bacillus su	93.33
d1n1ea2	189	Glycerol-3- phosphate dehydrogenase {Trypanosome (	93.22
d1dxla2	123	Dihydrolipoamide dehydrogenase {Garden pea (Pisum	93.21
d1p3da1	96	UDP-N-acetylmuramate-alanine ligase MurC {Haemophi	93.13
d1djqa2	156	Trimethylamine dehydrogenase, C-terminal domain {M	92.98
d1p9oa_	290	Phosphopantothenoylcysteine synthetase {Human (Hom	92.96
d1ojta2	125	Dihydrolipoamide dehydrogenase {Neisseria meningit	92.95
d1m6ya2	192	TM0872, methyltransferase domain {Thermotoga marit	92.87
d1mo9a2	121	NADH-dependent 2-ketopropyl coenzyme M oxidoreduct	92.81
d2b78a2	317	Hypothetical protein SMu776, middle and C-terminal	92.46
d1seza1	373	Protoporphyrinogen oxidase {Tobacco (Nicotiana tab	92.46
d1qp8a1	181	Putative formate dehydrogenase {Archaeon Pyrobacul	92.38
d1i36a2	152	Conserved hypothetical protein MTH1747 {Archaeon M	92.33
d1wzna1	251	Hypothetical methyltransferase PH1305 {Archaeon Py	92.24
d1h6va2	122	Mammalian thioredoxin reductase {Rat (Rattus norve	92.23
d1q1ra2	133	Putidaredoxin reductase {Pseudomonas putida [TaxId	92.21
d1vl5a_	231	Hypothetical protein BH2331 {Bacillus halodurans [	91.99
d1l7da1	183	Nicotinamide nucleotide transhydrogenase dI compon	91.93
d1obba1	171	Alpha-glucosidase AglA {Thermotoga maritima [TaxId	91.77
d1l3ia_	186	Precorrin-6Y methyltransferase (CbiT) {Archaeon Me	91.74
d1a9xa3	127	Carbamoyl phosphate synthetase (CPS), large subuni	91.67
d2i6ga1	198	Putative methyltransferase TehB {Salmonella typhim	91.63
d1ryia1	276	Glycine oxidase ThiO {Bacillus sp. [TaxId: 1409]}	91.48
d2nxca1	254	PrmA-like protein TTHA0656 (TT0836) {Thermus therm	91.46
d1gtea4	196	Dihydropyrimidine dehydrogenase, domain 2 {Pig (Su	91.4
d1u0sy_	118	CheY protein {Thermotoga maritima [TaxId: 2336]}	91.35
d1fcda1	186	Flavocytochrome c sulfide dehydrogenase, FCSD, fla	91.32
d1txga2	180	Glycerol-3- phosphate dehydrogenase {Archaeoglobus	91.1
d2cvza2	156	Hydroxyisobutyrate dehydrogenase {Thermus thermoph	91.0
d1v8ba1	163	S-adenosylhomocystein hydrolase {Plasmodium falcip	90.94
d2bzga1	229	Thiopurine S-methyltransferase {Human (Homo sapien	90.92
d1ve3a1	226	Hypothetical protein PH0226 {Archaeon Pyrococcus h	90.8
d1ps9a3	179	2,4-dienoyl-CoA reductase, middle domain {Escheric	90.77
d1oria_	316	Protein arginine N-methyltransferase 1, PRMT1 {Rat	90.69
d2bi7a1	314	UDP-galactopyranose mutase, N-terminal domain {Kle	90.34
d1yova1	529	Amyloid beta precursor protein-binding protein 1,	90.12
d1j6ua1	89	UDP-N-acetylmuramate-alanine ligase MurC {Thermoto	90.08
d2fhpa1	182	Putative methylase EF2452 {Enterococcus faecalis [	90.0
d1bgva1	255	Glutamate dehydrogenase {Clostridium symbiosum [Ta	89.99
d1diha1	162	Dihydrodipicolinate reductase {Escherichia coli [T	89.88
d1mv8a2	202	GDP-mannose 6-dehydrogenase {Pseudomonas aeruginos	89.71
d1hwxa1	293	Glutamate dehydrogenase {Cow (Bos taurus) [TaxId:	89.6
d2d59a1	139	Hypothetical protein PH1109 {Pyrococcus horikoshii	89.54
d2voua1	265	Dihydroxypyridine hydroxylase DhpH {Arthrobacter n	89.41
d1b26a1	234	Glutamate dehydrogenase {Thermotoga maritima [TaxI	89.39
d2gf3a1	281	Sarcosine oxidase {Bacillus sp., strain b0618 [Tax	89.38
d1q0qa2	151	1-deoxy-D-xylulose-5-phosphate reductoisomerase {E	89.32
d2gv8a2	107	Flavin-dependent monoxygenase SPBP16F5.08c {Schizo	89.23
d1djqa3	233	Trimethylamine dehydrogenase, middle domain {Methy	89.12
d1byia_	224	Dethiobiotin synthetase {Escherichia coli [TaxId:	89.04
d1pj5a2	305	N,N-dimethylglycine oxidase {Arthrobacter globifor	88.97
d2iida1	370	L-aminoacid oxidase {Malayan pit viper (Calloselas	88.92
d2bcgg1	297	Guanine nucleotide dissociation inhibitor, GDI {Ba	88.92
d2fpoa1	183	Methylase YhhF {Escherichia coli [TaxId: 562]}	88.82
d1s6ya1	169	6-phospho-beta-glucosidase {Bacillus stearothermop	88.49
d1xxla_	234	Hypothetical protein YcgJ {Bacillus subtilis [TaxI	88.29
d1v9la1	242	Glutamate dehydrogenase {Pyrobaculum islandicum [T	88.28
d2o14a2	208	Hypothetical protein YxiM {Bacillus subtilis [TaxI	88.15
d1i1na_	224	Protein-L-isoaspartyl O-methyltransferase {Human (	87.67
d1ws6a1	171	Methyltransferase TTHA0928 {Thermus thermophilus [	87.61
d1ihua2	279	Arsenite-translocating ATPase ArsA {Escherichia co	87.51
d1f0ka_	351	Peptidoglycan biosynthesis glycosyltransferase Mur	87.35
d2b3ta1	274	N5-glutamine methyltransferase, HemK {Escherichia	86.8
d1q1ra1	185	Putidaredoxin reductase {Pseudomonas putida [TaxId	86.05
d1kl7a_	511	Threonine synthase {Baker's yeast (Saccharomyces c	86.04
d1dusa_	194	Hypothetical protein MJ0882 {Archaeon Methanococcu	85.98
d2csua3	163	Acetate-CoA ligase alpha chain, AcdA, domains 2 an	85.84
d1g3qa_	237	Cell division regulator MinD {Archaeon Pyrococcus	85.49
d1feca2	117	Trypanothione reductase {Crithidia fasciculata [Ta	84.9
d1d5ta1	336	Guanine nucleotide dissociation inhibitor, GDI {Co	84.75
d1aoga2	117	Trypanothione reductase {Trypanosoma cruzi [TaxId:	84.62
d1yb2a1	250	Hypothetical protein Ta0852 {Thermoplasma acidophi	84.1
d2ex4a1	222	Adrenal gland protein AD-003 (C9orf32) {Human (Hom	84.06
d3bula2	156	Methionine synthase, C-terminal domain {Escherichi	83.94
d1gsoa2	105	Glycinamide ribonucleotide synthetase (GAR-syn), N	83.94
d1g6q1_	328	Arginine methyltransferase, HMT1 {Baker's yeast (S	83.52
d1lqta1	216	Ferredoxin:NADP reductase FprA {Mycobacterium tube	83.31
d1qkia1	203	Glucose 6-phosphate dehydrogenase, N-terminal doma	83.24
d1vbfa_	224	Protein-L-isoaspartyl O-methyltransferase {Sulfolo	82.94
d1krwa_	123	NTRC receiver domain {Salmonella typhimurium [TaxI	82.78
d1y0pa2	308	Flavocytochrome c3 (respiratory fumarate reductase	82.69
d1iowa1	96	D-Ala-D-Ala ligase, N-domain {Escherichia coli, ge	82.25
d2i0za1	251	Flavoprotein BC4706 {Bacillus cereus [TaxId: 1396]	81.91
d2dw4a2	449	Lysine-specific histone demethylase 1, LSD1 {Human	81.76
d1gtea3	153	Dihydropyrimidine dehydrogenase, domain 3 {Pig (Su	81.72
d1inla_	295	Spermidine synthase {Thermotoga maritima [TaxId: 2	81.57
d1v71a1	318	Hypothetical protein C320.14 (SPCC320.14, SPCC330.	81.52
d1w4xa2	235	Phenylacetone monooxygenase {Thermobifida fusca [T	81.42
d1hyqa_	232	Cell division regulator MinD {Archaeon Archaeoglob	81.29
d1gtma1	239	Glutamate dehydrogenase {Archaeon Pyrococcus furio	81.28
d1cjca1	225	Adrenodoxin reductase of mitochondrial p450 system	81.09
d1wg8a2	182	TM0872, methyltransferase domain {Thermus thermoph	80.92
d1ccwa_	137	Glutamate mutase, small subunit {Clostridium cochl	80.88
d1a9xa4	121	Carbamoyl phosphate synthetase (CPS), large subuni	80.67
d2o57a1	282	Putative sarcosine dimethylglycine methyltransfera	80.66
d2o07a1	285	Spermidine synthase {Human (Homo sapiens) [TaxId:	80.06

>d1vl8a_ c.2.1.2 (A:) Gluconate 5-dehydrogenase {Thermotoga maritima [TaxId: 2336]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Gluconate 5-dehydrogenase
species: Thermotoga maritima [TaxId: 2336]

Probab=100.00  E-value=3.2e-46  Score=311.14  Aligned_cols=195  Identities=29%  Similarity=0.516  Sum_probs=179.7

Q ss_pred             CCCCCEEEEcCCCChHHHHHHHHHHHcCCeEEEEeCCcchHHHHHHHHHhhCCCcEEEEEccCCCHHHHHHHHHHHHhHc
Q 044010           44 DVSGKVVIITGASSGIGEHLAYEYARRGACLALCARREKSLEEVADTAREIGSPDVITIRADVSKVDDCRSLVEETMNHF  123 (248)
Q Consensus        44 ~~~~k~~lVtGg~~gIG~aia~~l~~~G~~V~l~~r~~~~~~~~~~~l~~~~~~~v~~~~~D~~~~~~~~~~~~~~~~~~  123 (248)
                      +++||++|||||++|||+++|++|+++|++|++++|+.+++++..+++.+..+.++..+.+|++|+++++++++++.+++
T Consensus         2 ~l~gK~~lITGas~GIG~aia~~la~~Ga~V~i~~r~~~~~~~~~~~l~~~~g~~~~~~~~Dv~~~~~v~~~~~~~~~~~   81 (251)
T d1vl8a_           2 DLRGRVALVTGGSRGLGFGIAQGLAEAGCSVVVASRNLEEASEAAQKLTEKYGVETMAFRCDVSNYEEVKKLLEAVKEKF   81 (251)
T ss_dssp             CCTTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHHHCCCEEEEECCTTCHHHHHHHHHHHHHHH
T ss_pred             CCCCCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHHHhCCcEEEEEccCCCHHHHHHHHHHHHHHc
Confidence            68999999999999999999999999999999999999999999888876666689999999999999999999999999


Q ss_pred             CCccEEEEccccCCcccccccCChHHHHHHHHhhhHHHHHHHHHHhhhhhhcC-CeEEEEcCccc-cccCCCCccchHHH
Q 044010          124 GRLDHLVNNAGISSVALFEDIVNITDFKQIMNINFWGSVYTTRFAVPHLRYTK-GKIVVLSSAAS-WLTAPRMSFYNASK  201 (248)
Q Consensus       124 g~id~vv~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~-g~iV~isS~~~-~~~~~~~~~Y~~sK  201 (248)
                      |++|++|||||.....++.+ .+.++|++.+++|+.++++++|++.|.|++++ |+||+++|..+ ..+.+++.+|++||
T Consensus        82 g~iDiLVnnAG~~~~~~~~~-~~~e~~~~~~~vNl~~~~~~~~~~~~~m~~~~~G~Ii~i~S~~~~~~~~~~~~~Y~asK  160 (251)
T d1vl8a_          82 GKLDTVVNAAGINRRHPAEE-FPLDEFRQVIEVNLFGTYYVCREAFSLLRESDNPSIINIGSLTVEEVTMPNISAYAASK  160 (251)
T ss_dssp             SCCCEEEECCCCCCCCCGGG-CCHHHHHHHHHHHTHHHHHHHHHHHHHHTTCSSCEEEEECCGGGTCCCSSSCHHHHHHH
T ss_pred             CCCCEEEECCCCCCCCChhh-CCHHHHHHHHHhhhhhhhhhhhhhhhcccccccccccccccchhccccCccccchHHHH
Confidence            99999999999887777666 58899999999999999999999999997655 89999999765 45778889999999


Q ss_pred             HHHHHHHHHHHHHhCCC-eEEEEEecCccccCccccccc
Q 044010          202 AALVLFFETLRVELGSD-VGVTIVTPGFIESELTQGKFL  239 (248)
Q Consensus       202 aal~~l~~~la~~~~~~-i~v~~v~pg~v~T~~~~~~~~  239 (248)
                      +|+++|++++|.|++++ ||||+|+||+++|+|.+..+.
T Consensus       161 aal~~lt~~lA~e~~~~gIrVN~I~PG~i~T~~~~~~~~  199 (251)
T d1vl8a_         161 GGVASLTKALAKEWGRYGIRVNVIAPGWYRTKMTEAVFS  199 (251)
T ss_dssp             HHHHHHHHHHHHHHGGGTCEEEEEEECCBCSTTTHHHHT
T ss_pred             HhHHHHHHHHHHHhcccCeEEEEEeeCcccCHHHHhccC
Confidence            99999999999999885 999999999999999886654

>d1x1ta1 c.2.1.2 (A:1-260) D(-)-3-hydroxybutyrate dehydrogenase {Pseudomonas fragi [TaxId: 296]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: D(-)-3-hydroxybutyrate dehydrogenase
species: Pseudomonas fragi [TaxId: 296]

Probab=100.00  E-value=2.9e-46  Score=313.07  Aligned_cols=194  Identities=30%  Similarity=0.468  Sum_probs=173.9

Q ss_pred             CCCCEEEEcCCCChHHHHHHHHHHHcCCeEEEEeCCc-chHHHHHHHHHhhCCCcEEEEEccCCCHHHHHHHHHHHHhHc
Q 044010           45 VSGKVVIITGASSGIGEHLAYEYARRGACLALCARRE-KSLEEVADTAREIGSPDVITIRADVSKVDDCRSLVEETMNHF  123 (248)
Q Consensus        45 ~~~k~~lVtGg~~gIG~aia~~l~~~G~~V~l~~r~~-~~~~~~~~~l~~~~~~~v~~~~~D~~~~~~~~~~~~~~~~~~  123 (248)
                      |+||++|||||++|||+++|++|+++|++|++++|+. +.+++..+++.+.++.++.++.+|++|+++++++++++.+++
T Consensus         2 L~gK~alITGas~GIG~aiA~~la~~Ga~V~~~~r~~~~~~~~~~~~~~~~~g~~~~~~~~Dv~~~~~v~~~~~~~~~~~   81 (260)
T d1x1ta1           2 LKGKVAVVTGSTSGIGLGIATALAAQGADIVLNGFGDAAEIEKVRAGLAAQHGVKVLYDGADLSKGEAVRGLVDNAVRQM   81 (260)
T ss_dssp             CTTCEEEETTCSSHHHHHHHHHHHHTTCEEEEECCSCHHHHHHHHHHHHHHHTSCEEEECCCTTSHHHHHHHHHHHHHHH
T ss_pred             CCcCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEeCCcHHHHHHHHHHHHHhcCCcEEEEECCCCCHHHHHHHHHHHHHHh
Confidence            6899999999999999999999999999999999974 567778888877666689999999999999999999999999


Q ss_pred             CCccEEEEccccCCcccccccCChHHHHHHHHhhhHHHHHHHHHHhhhhhhcC-CeEEEEcCccccccCCCCccchHHHH
Q 044010          124 GRLDHLVNNAGISSVALFEDIVNITDFKQIMNINFWGSVYTTRFAVPHLRYTK-GKIVVLSSAASWLTAPRMSFYNASKA  202 (248)
Q Consensus       124 g~id~vv~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~-g~iV~isS~~~~~~~~~~~~Y~~sKa  202 (248)
                      |++|++|||||...+.++.+ .+.++|++.+++|+.++++++|+++|.|++++ |+||++||.++..+.+++.+|++||+
T Consensus        82 G~iDiLVnnAG~~~~~~~~~-~~~~~~~~~~~vNl~g~~~~~~~~~~~m~~~~~G~Iv~isS~~~~~~~~~~~~Y~asKa  160 (260)
T d1x1ta1          82 GRIDILVNNAGIQHTALIED-FPTEKWDAILALNLSAVFHGTAAALPHMKKQGFGRIINIASAHGLVASANKSAYVAAKH  160 (260)
T ss_dssp             SCCSEEEECCCCCCCCCGGG-CCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEEECCGGGTSCCTTCHHHHHHHH
T ss_pred             CCCcEEEeecccccCCchhh-hhHHhhhhhhhccccccccccchhhhhHhhcCCceEeecccccceeccCCcchhhhhhh
Confidence            99999999999988777766 58899999999999999999999999998655 89999999999999999999999999


Q ss_pred             HHHHHHHHHHHHhCCC-eEEEEEecCccccCccccccc
Q 044010          203 ALVLFFETLRVELGSD-VGVTIVTPGFIESELTQGKFL  239 (248)
Q Consensus       203 al~~l~~~la~~~~~~-i~v~~v~pg~v~T~~~~~~~~  239 (248)
                      |+++|++++|.|++++ ||||+|+||+|+|+|.+....
T Consensus       161 al~~lt~~lA~el~~~gIrVN~I~PG~i~T~~~~~~~~  198 (260)
T d1x1ta1         161 GVVGFTKVTALETAGQGITANAICPGWVRTPLVEKQIS  198 (260)
T ss_dssp             HHHHHHHHHHHHHTTTTEEEEEEEECCBCC--------
T ss_pred             hHHHhHHHHHHHhchhCcEEEEEecCCCCChhhhhhhh
Confidence            9999999999999885 999999999999999876543

>d1iy8a_ c.2.1.2 (A:) Levodione reductase {Corynebacterium aquaticum [TaxId: 144185]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Levodione reductase
species: Corynebacterium aquaticum [TaxId: 144185]

Probab=100.00  E-value=2.8e-46  Score=312.72  Aligned_cols=196  Identities=27%  Similarity=0.375  Sum_probs=179.2

Q ss_pred             CCCCCEEEEcCCCChHHHHHHHHHHHcCCeEEEEeCCcchHHHHHHHHHhhC-CCcEEEEEccCCCHHHHHHHHHHHHhH
Q 044010           44 DVSGKVVIITGASSGIGEHLAYEYARRGACLALCARREKSLEEVADTAREIG-SPDVITIRADVSKVDDCRSLVEETMNH  122 (248)
Q Consensus        44 ~~~~k~~lVtGg~~gIG~aia~~l~~~G~~V~l~~r~~~~~~~~~~~l~~~~-~~~v~~~~~D~~~~~~~~~~~~~~~~~  122 (248)
                      +++||++|||||++|||+++|++|+++|++|++++|+.+++++..+++.+.+ +.++..++||++|+++++++++++.++
T Consensus         1 rl~gK~alITGas~GIG~aia~~la~~Ga~V~i~~r~~~~l~~~~~~~~~~~~~~~~~~~~~Dvt~~~~v~~~~~~~~~~   80 (258)
T d1iy8a_           1 RFTDRVVLITGGGSGLGRATAVRLAAEGAKLSLVDVSSEGLEASKAAVLETAPDAEVLTTVADVSDEAQVEAYVTATTER   80 (258)
T ss_dssp             CCTTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHHCTTCCEEEEECCTTSHHHHHHHHHHHHHH
T ss_pred             CCCCCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHhhCCCCeEEEEeccCCCHHHHHHHHHHHHHH
Confidence            5899999999999999999999999999999999999999999888887654 457899999999999999999999999


Q ss_pred             cCCccEEEEccccCCcccccccCChHHHHHHHHhhhHHHHHHHHHHhhhhhh-cCCeEEEEcCccccccCCCCccchHHH
Q 044010          123 FGRLDHLVNNAGISSVALFEDIVNITDFKQIMNINFWGSVYTTRFAVPHLRY-TKGKIVVLSSAASWLTAPRMSFYNASK  201 (248)
Q Consensus       123 ~g~id~vv~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~-~~g~iV~isS~~~~~~~~~~~~Y~~sK  201 (248)
                      +|++|++|||||+..+....++.+.++|++.+++|+.++++++|++.|.|++ .+|+||++||.++..+.++..+|++||
T Consensus        81 ~G~iDiLVnnAG~~~~~~~~~~~~~~~~~~~~~vNl~g~~~~~~~~~~~m~~~~~G~Ii~isS~~~~~~~~~~~~Y~asK  160 (258)
T d1iy8a_          81 FGRIDGFFNNAGIEGKQNPTESFTAAEFDKVVSINLRGVFLGLEKVLKIMREQGSGMVVNTASVGGIRGIGNQSGYAAAK  160 (258)
T ss_dssp             HSCCSEEEECCCCCCCCBCGGGSCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCCEEEEECCGGGTSBCSSBHHHHHHH
T ss_pred             hCCCCEEEECCcccccCCchhhhhhhHHHHHhhhhccchhhhhhhhHhhhhhhcCCCCcccccHhhccCCCCchHHHHHH
Confidence            9999999999998755443444688999999999999999999999999874 459999999999999999999999999


Q ss_pred             HHHHHHHHHHHHHhCCC-eEEEEEecCccccCccccccc
Q 044010          202 AALVLFFETLRVELGSD-VGVTIVTPGFIESELTQGKFL  239 (248)
Q Consensus       202 aal~~l~~~la~~~~~~-i~v~~v~pg~v~T~~~~~~~~  239 (248)
                      +|+.+|+++||.|+++. ||||+|+||+++|||.+..+.
T Consensus       161 aal~~lt~~lA~el~~~gIrVN~i~PG~v~T~~~~~~~~  199 (258)
T d1iy8a_         161 HGVVGLTRNSAVEYGRYGIRINAIAPGAIWTPMVENSMK  199 (258)
T ss_dssp             HHHHHHHHHHHHHHGGGTCEEEEEEECSBCSHHHHHHHH
T ss_pred             HHHHHHHHHHHHHhCccCceEEEEeeCcccCHHHHHHHh
Confidence            99999999999999885 999999999999999876543

>d1fmca_ c.2.1.2 (A:) 7-alpha-hydroxysteroid dehydrogenase {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: 7-alpha-hydroxysteroid dehydrogenase
species: Escherichia coli [TaxId: 562]

Probab=100.00  E-value=2.3e-46  Score=312.71  Aligned_cols=197  Identities=25%  Similarity=0.450  Sum_probs=182.5

Q ss_pred             ccCCCCCEEEEcCCCChHHHHHHHHHHHcCCeEEEEeCCcchHHHHHHHHHhhCCCcEEEEEccCCCHHHHHHHHHHHHh
Q 044010           42 SEDVSGKVVIITGASSGIGEHLAYEYARRGACLALCARREKSLEEVADTAREIGSPDVITIRADVSKVDDCRSLVEETMN  121 (248)
Q Consensus        42 ~~~~~~k~~lVtGg~~gIG~aia~~l~~~G~~V~l~~r~~~~~~~~~~~l~~~~~~~v~~~~~D~~~~~~~~~~~~~~~~  121 (248)
                      .++++||++|||||++|||+++|++|+++|++|++++|+++++++..+++++.++ ++.++++|++|+++++++++++.+
T Consensus         6 ~m~L~gK~alITGas~GIG~aia~~la~~Ga~V~~~~r~~~~~~~~~~~l~~~g~-~~~~~~~Dvs~~~~~~~~~~~~~~   84 (255)
T d1fmca_           6 NLRLDGKCAIITGAGAGIGKEIAITFATAGASVVVSDINADAANHVVDEIQQLGG-QAFACRCDITSEQELSALADFAIS   84 (255)
T ss_dssp             GGCCTTCEEEETTTTSHHHHHHHHHHHTTTCEEEEEESCHHHHHHHHHHHHHTTC-CEEEEECCTTCHHHHHHHHHHHHH
T ss_pred             CCCCCCCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHHcCC-cEEEEEccCCCHHHHHHHHHHHHH
Confidence            3578999999999999999999999999999999999999999999999988765 789999999999999999999999


Q ss_pred             HcCCccEEEEccccCCcccccccCChHHHHHHHHhhhHHHHHHHHHHhhhhhhcC-CeEEEEcCccccccCCCCccchHH
Q 044010          122 HFGRLDHLVNNAGISSVALFEDIVNITDFKQIMNINFWGSVYTTRFAVPHLRYTK-GKIVVLSSAASWLTAPRMSFYNAS  200 (248)
Q Consensus       122 ~~g~id~vv~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~-g~iV~isS~~~~~~~~~~~~Y~~s  200 (248)
                      ++|++|++|||||...+.++ + .+.++|++.+++|+.++++++|++.|.|.+++ |+||++||.++..+.++..+|++|
T Consensus        85 ~~g~iDilvnnAG~~~~~~~-e-~~~e~~~~~~~vNl~~~~~~~~~~~~~m~~~~~g~Ii~isS~~~~~~~~~~~~Y~as  162 (255)
T d1fmca_          85 KLGKVDILVNNAGGGGPKPF-D-MPMADFRRAYELNVFSFFHLSQLVAPEMEKNGGGVILTITSMAAENKNINMTSYASS  162 (255)
T ss_dssp             HHSSCCEEEECCCCCCCCCT-T-CCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEEECCGGGTCCCTTCHHHHHH
T ss_pred             HcCCCCEeeeCCcCCCCCcc-c-CCHHHHHHHHHHHHHHhhhhHHHHHhhhccccccccccccccchhccccccccchhH
Confidence            99999999999998876655 4 57899999999999999999999999987655 799999999999999999999999


Q ss_pred             HHHHHHHHHHHHHHhCCC-eEEEEEecCccccCccccccccc
Q 044010          201 KAALVLFFETLRVELGSD-VGVTIVTPGFIESELTQGKFLTG  241 (248)
Q Consensus       201 Kaal~~l~~~la~~~~~~-i~v~~v~pg~v~T~~~~~~~~~~  241 (248)
                      |+|+++|++++|.|++++ ||||+|+||+|+|++.+..+.++
T Consensus       163 Kaal~~lt~~lA~el~~~gIrVN~I~PG~i~T~~~~~~~~~e  204 (255)
T d1fmca_         163 KAAASHLVRNMAFDLGEKNIRVNGIAPGAILTDALKSVITPE  204 (255)
T ss_dssp             HHHHHHHHHHHHHHHHTTTEEEEEEEECSBCSHHHHTTCCHH
T ss_pred             HHHHHHHHHHHHHHhCccCeEEEEeeeCcCcChHhhccCCHH
Confidence            999999999999999885 99999999999999988766543

>d2ew8a1 c.2.1.2 (A:3-249) (s)-1-phenylethanol dehydrogenase {Azoarcus sp. ebn1 [TaxId: 76114]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: (s)-1-phenylethanol dehydrogenase
species: Azoarcus sp. ebn1 [TaxId: 76114]

Probab=100.00  E-value=6.5e-46  Score=308.64  Aligned_cols=194  Identities=29%  Similarity=0.527  Sum_probs=167.3

Q ss_pred             CCCCCEEEEcCCCChHHHHHHHHHHHcCCeEEEEeCCcchHHHHHHHHHhhCCCcEEEEEccCCCHHHHHHHHHHHHhHc
Q 044010           44 DVSGKVVIITGASSGIGEHLAYEYARRGACLALCARREKSLEEVADTAREIGSPDVITIRADVSKVDDCRSLVEETMNHF  123 (248)
Q Consensus        44 ~~~~k~~lVtGg~~gIG~aia~~l~~~G~~V~l~~r~~~~~~~~~~~l~~~~~~~v~~~~~D~~~~~~~~~~~~~~~~~~  123 (248)
                      +|+||++|||||++|||+++|++|+++|++|++++|++.+  ...+.+++.+ .++..+.+|++|+++++++++++.+++
T Consensus         2 rL~gKvalVTGas~GIG~aia~~la~~Ga~V~~~~~~~~~--~~~~~~~~~g-~~~~~~~~Dvs~~~~v~~~~~~~~~~~   78 (247)
T d2ew8a1           2 RLKDKLAVITGGANGIGRAIAERFAVEGADIAIADLVPAP--EAEAAIRNLG-RRVLTVKCDVSQPGDVEAFGKQVISTF   78 (247)
T ss_dssp             TTTTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESSCCH--HHHHHHHHTT-CCEEEEECCTTCHHHHHHHHHHHHHHH
T ss_pred             CCCCCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEECCchH--HHHHHHHHcC-CcEEEEEeeCCCHHHHHHHHHHHHHHc
Confidence            5899999999999999999999999999999999998753  3334455554 489999999999999999999999999


Q ss_pred             CCccEEEEccccCCcccccccCChHHHHHHHHhhhHHHHHHHHHHhhhhhhcC-CeEEEEcCccccccCCCCccchHHHH
Q 044010          124 GRLDHLVNNAGISSVALFEDIVNITDFKQIMNINFWGSVYTTRFAVPHLRYTK-GKIVVLSSAASWLTAPRMSFYNASKA  202 (248)
Q Consensus       124 g~id~vv~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~-g~iV~isS~~~~~~~~~~~~Y~~sKa  202 (248)
                      |++|++|||||.....++.+ .+.++|++.+++|+.++++++|++.|.|++++ |+||++||.++..+.++.++|++||+
T Consensus        79 G~iDilVnnAG~~~~~~~~~-~~~e~~~~~~~vNl~~~~~~~~~~~~~m~~~~~G~Iv~isS~~~~~~~~~~~~Y~asKa  157 (247)
T d2ew8a1          79 GRCDILVNNAGIYPLIPFDE-LTFEQWKKTFEINVDSGFLMAKAFVPGMKRNGWGRIINLTSTTYWLKIEAYTHYISTKA  157 (247)
T ss_dssp             SCCCEEEECCCCCCCCCGGG-CCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEEECCGGGGSCCSSCHHHHHHHH
T ss_pred             CCCCEEEECCCCCCCCChHh-CCHHHhhhhheeehhhhhHHHHHHHhHHHhcCCCCccccccchhcccCcccccchhhhc
Confidence            99999999999988777766 58899999999999999999999999998655 99999999999999999999999999


Q ss_pred             HHHHHHHHHHHHhCCC-eEEEEEecCccccCccccccccc
Q 044010          203 ALVLFFETLRVELGSD-VGVTIVTPGFIESELTQGKFLTG  241 (248)
Q Consensus       203 al~~l~~~la~~~~~~-i~v~~v~pg~v~T~~~~~~~~~~  241 (248)
                      |+.+|++++|.|+++. ||||+|+||+++|+|.+....+.
T Consensus       158 al~~ltk~lA~ela~~gIrVN~I~PG~i~T~~~~~~~~~~  197 (247)
T d2ew8a1         158 ANIGFTRALASDLGKDGITVNAIAPSLVRTATTEASALSA  197 (247)
T ss_dssp             HHHHHHHHHHHHHGGGTEEEEEEEECCC------------
T ss_pred             cHHHHHHHHHHHhcccCeEEEEEeeCCCCCccccccccch
Confidence            9999999999999885 99999999999999987765543

>d1q7ba_ c.2.1.2 (A:) beta-keto acyl carrier protein reductase {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: beta-keto acyl carrier protein reductase
species: Escherichia coli [TaxId: 562]

Probab=100.00  E-value=2.8e-46  Score=310.12  Aligned_cols=192  Identities=28%  Similarity=0.424  Sum_probs=178.3

Q ss_pred             CCCCCEEEEcCCCChHHHHHHHHHHHcCCeEEEEeCCcchHHHHHHHHHhhCCCcEEEEEccCCCHHHHHHHHHHHHhHc
Q 044010           44 DVSGKVVIITGASSGIGEHLAYEYARRGACLALCARREKSLEEVADTAREIGSPDVITIRADVSKVDDCRSLVEETMNHF  123 (248)
Q Consensus        44 ~~~~k~~lVtGg~~gIG~aia~~l~~~G~~V~l~~r~~~~~~~~~~~l~~~~~~~v~~~~~D~~~~~~~~~~~~~~~~~~  123 (248)
                      |++||+++||||++|||+++|++|+++|++|++++|+++++++..+++..    +...+.+|++|+++++++++++.+++
T Consensus         1 dl~gK~alITGas~GIG~a~a~~l~~~G~~Vv~~~r~~~~l~~~~~~~~~----~~~~~~~Dv~~~~~v~~~~~~~~~~~   76 (243)
T d1q7ba_           1 NFEGKIALVTGASRGIGRAIAETLAARGAKVIGTATSENGAQAISDYLGA----NGKGLMLNVTDPASIESVLEKIRAEF   76 (243)
T ss_dssp             CCTTCEEEESSCSSHHHHHHHHHHHHTTCEEEEEESSHHHHHHHHHHHGG----GEEEEECCTTCHHHHHHHHHHHHHHT
T ss_pred             CCCCCEEEEeCCCCHHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHHhCC----CCcEEEEEecCHHHhhhhhhhhhccc
Confidence            68999999999999999999999999999999999999888888777742    67889999999999999999999999


Q ss_pred             CCccEEEEccccCCcccccccCChHHHHHHHHhhhHHHHHHHHHHhhhhhhcC-CeEEEEcCccccccCCCCccchHHHH
Q 044010          124 GRLDHLVNNAGISSVALFEDIVNITDFKQIMNINFWGSVYTTRFAVPHLRYTK-GKIVVLSSAASWLTAPRMSFYNASKA  202 (248)
Q Consensus       124 g~id~vv~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~-g~iV~isS~~~~~~~~~~~~Y~~sKa  202 (248)
                      |++|++|||||.....++.+ .+.++|++.+++|+.+++.++|++.|.|++++ |+||++||..+..+.++.++|++||+
T Consensus        77 g~iDilVnnAg~~~~~~~~~-~~~~~~~~~~~vNl~~~~~~~~~~~~~m~~~~~G~II~isS~~~~~~~~~~~~Y~asKa  155 (243)
T d1q7ba_          77 GEVDILVNNAGITRDNLLMR-MKDEEWNDIIETNLSSVFRLSKAVMRAMMKKRHGRIITIGSVVGTMGNGGQANYAAAKA  155 (243)
T ss_dssp             CSCSEEEECCCCCCCCCGGG-CCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEEECCHHHHHCCTTCHHHHHHHH
T ss_pred             CCcceehhhhhhcccccccc-ccccccccccceeechhhhhHHHHHHHHHHcCCCEeeeecchhhcCCCCCCHHHHHHHH
Confidence            99999999999988777766 58899999999999999999999999997554 99999999999999999999999999


Q ss_pred             HHHHHHHHHHHHhCCC-eEEEEEecCccccCcccccccc
Q 044010          203 ALVLFFETLRVELGSD-VGVTIVTPGFIESELTQGKFLT  240 (248)
Q Consensus       203 al~~l~~~la~~~~~~-i~v~~v~pg~v~T~~~~~~~~~  240 (248)
                      |+++|++++|.|+++. ||||+|+||+++|+|.+....+
T Consensus       156 al~~lt~~lA~ela~~gIrVN~I~PG~i~T~~~~~~~~~  194 (243)
T d1q7ba_         156 GLIGFSKSLAREVASRGITVNVVAPGFIETDMTRALSDD  194 (243)
T ss_dssp             HHHHHHHHHHHHHGGGTEEEEEEEECSBCCHHHHTSCHH
T ss_pred             HHHHHHHHHHHHhCccCeEEEEEecceEechhhhhhhhh
Confidence            9999999999999885 9999999999999998776544

>d1nffa_ c.2.1.2 (A:) Putative oxidoreductase Rv2002 {Mycobacterium tuberculosis [TaxId: 1773]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Putative oxidoreductase Rv2002
species: Mycobacterium tuberculosis [TaxId: 1773]

Probab=100.00  E-value=1.3e-45  Score=306.03  Aligned_cols=192  Identities=23%  Similarity=0.381  Sum_probs=177.5

Q ss_pred             cCCCCCEEEEcCCCChHHHHHHHHHHHcCCeEEEEeCCcchHHHHHHHHHhhCCCcEEEEEccCCCHHHHHHHHHHHHhH
Q 044010           43 EDVSGKVVIITGASSGIGEHLAYEYARRGACLALCARREKSLEEVADTAREIGSPDVITIRADVSKVDDCRSLVEETMNH  122 (248)
Q Consensus        43 ~~~~~k~~lVtGg~~gIG~aia~~l~~~G~~V~l~~r~~~~~~~~~~~l~~~~~~~v~~~~~D~~~~~~~~~~~~~~~~~  122 (248)
                      .+++||++|||||++|||+++|++|+++|++|++++|+++++++..+++.    .++.++++|++|+++++++++++.++
T Consensus         2 G~L~gK~alITGas~GIG~aia~~la~~G~~V~~~~r~~~~~~~~~~~~~----~~~~~~~~Dv~~~~~v~~~~~~~~~~   77 (244)
T d1nffa_           2 GRLTGKVALVSGGARGMGASHVRAMVAEGAKVVFGDILDEEGKAMAAELA----DAARYVHLDVTQPAQWKAAVDTAVTA   77 (244)
T ss_dssp             CTTTTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHTG----GGEEEEECCTTCHHHHHHHHHHHHHH
T ss_pred             cccCCCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHhh----CcceEEEeecCCHHHHHHHHHHHHHH
Confidence            47899999999999999999999999999999999999988887777664    36788999999999999999999999


Q ss_pred             cCCccEEEEccccCCcccccccCChHHHHHHHHhhhHHHHHHHHHHhhhhhhc-CCeEEEEcCccccccCCCCccchHHH
Q 044010          123 FGRLDHLVNNAGISSVALFEDIVNITDFKQIMNINFWGSVYTTRFAVPHLRYT-KGKIVVLSSAASWLTAPRMSFYNASK  201 (248)
Q Consensus       123 ~g~id~vv~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~-~g~iV~isS~~~~~~~~~~~~Y~~sK  201 (248)
                      +|++|++|||||.....++.+ .+.++|++.+++|+.++++++|++.|.|+++ +|+||++||..+..+.++..+|++||
T Consensus        78 ~g~idilinnAG~~~~~~~~~-~~~~~~~~~~~vNl~~~~~~~~~~~~~m~~~~~G~Ii~isS~~~~~~~~~~~~Y~asK  156 (244)
T d1nffa_          78 FGGLHVLVNNAGILNIGTIED-YALTEWQRILDVNLTGVFLGIRAVVKPMKEAGRGSIINISSIEGLAGTVACHGYTATK  156 (244)
T ss_dssp             HSCCCEEEECCCCCCCBCTTT-SCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEEECCGGGTSCCTTBHHHHHHH
T ss_pred             hCCCeEEEECCcccCCCchhh-CCHHHHhHHhhcccchhhHHHHHHHhHHHhcCcceEEeccccccccccccccchhhHH
Confidence            999999999999988777766 6889999999999999999999999998755 59999999999999999999999999


Q ss_pred             HHHHHHHHHHHHHhCCC-eEEEEEecCccccCccccccc
Q 044010          202 AALVLFFETLRVELGSD-VGVTIVTPGFIESELTQGKFL  239 (248)
Q Consensus       202 aal~~l~~~la~~~~~~-i~v~~v~pg~v~T~~~~~~~~  239 (248)
                      +|+++|+|++|.|+++. ||||+|+||+++|+|.+....
T Consensus       157 aal~~ltk~lA~el~~~gIrVN~I~PG~i~T~~~~~~~~  195 (244)
T d1nffa_         157 FAVRGLTKSTALELGPSGIRVNSIHPGLVKTPMTDWVPE  195 (244)
T ss_dssp             HHHHHHHHHHHHHHGGGTEEEEEEEECCBCSGGGTTSCT
T ss_pred             HHHHHHHHHHHHHhcccCEEEEEEeeCCccChhHhhhhH
Confidence            99999999999999885 999999999999999876543

>d2c07a1 c.2.1.2 (A:54-304) beta-keto acyl carrier protein reductase {Malaria parasite (Plasmodium falciparum) [TaxId: 5833]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: beta-keto acyl carrier protein reductase
species: Malaria parasite (Plasmodium falciparum) [TaxId: 5833]

Probab=100.00  E-value=4.7e-46  Score=310.20  Aligned_cols=194  Identities=27%  Similarity=0.409  Sum_probs=177.2

Q ss_pred             CCCCCEEEEcCCCChHHHHHHHHHHHcCCeEEEEeCCcchHHHHHHHHHhhCCCcEEEEEccCCCHHHHHHHHHHHHhHc
Q 044010           44 DVSGKVVIITGASSGIGEHLAYEYARRGACLALCARREKSLEEVADTAREIGSPDVITIRADVSKVDDCRSLVEETMNHF  123 (248)
Q Consensus        44 ~~~~k~~lVtGg~~gIG~aia~~l~~~G~~V~l~~r~~~~~~~~~~~l~~~~~~~v~~~~~D~~~~~~~~~~~~~~~~~~  123 (248)
                      .++||++|||||++|||+++|++|+++|++|++++|+++++++..+++++.+. ++..+++|++|+++++++++++.+++
T Consensus         7 ~lenKvalITGas~GIG~a~a~~la~~Ga~V~~~~r~~~~l~~~~~~l~~~g~-~~~~~~~Dvt~~~~v~~~~~~~~~~~   85 (251)
T d2c07a1           7 CGENKVALVTGAGRGIGREIAKMLAKSVSHVICISRTQKSCDSVVDEIKSFGY-ESSGYAGDVSKKEEISEVINKILTEH   85 (251)
T ss_dssp             CCSSCEEEEESTTSHHHHHHHHHHTTTSSEEEEEESSHHHHHHHHHHHHTTTC-CEEEEECCTTCHHHHHHHHHHHHHHC
T ss_pred             CCCCCEEEEeCCCCHHHHHHHHHHHHcCCEEEEEECCHHHHHHHHHHHHhcCC-cEEEEEccCCCHHHHHHHHHHHHHhc
Confidence            57899999999999999999999999999999999999999999999987665 78999999999999999999999999


Q ss_pred             CCccEEEEccccCCcccccccCChHHHHHHHHhhhHHHHHHHHHHhhhhhhcC-CeEEEEcCccccccCCCCccchHHHH
Q 044010          124 GRLDHLVNNAGISSVALFEDIVNITDFKQIMNINFWGSVYTTRFAVPHLRYTK-GKIVVLSSAASWLTAPRMSFYNASKA  202 (248)
Q Consensus       124 g~id~vv~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~-g~iV~isS~~~~~~~~~~~~Y~~sKa  202 (248)
                      |++|++|||||.....++.+ .+.++|++.+++|+.++++++|++.|.|++++ |+||++||.++..+.++..+|++||+
T Consensus        86 g~iDilvnnag~~~~~~~~~-~~~~~~~~~~~vNl~~~~~~~~~~~~~m~~~~~G~IVnisS~~~~~~~~~~~~Y~asKa  164 (251)
T d2c07a1          86 KNVDILVNNAGITRDNLFLR-MKNDEWEDVLRTNLNSLFYITQPISKRMINNRYGRIINISSIVGLTGNVGQANYSSSKA  164 (251)
T ss_dssp             SCCCEEEECCCCCCCCCTTT-CCHHHHHHHHHHHTTHHHHHHHHHHHHHHHHTCEEEEEECCTHHHHCCTTCHHHHHHHH
T ss_pred             CCceeeeecccccccccccc-ccHHHHhhhheeeehhhhhhhhhcCcccccCCCeEEEEECCHHhcCCCCCCHHHHHHHH
Confidence            99999999999887777666 57899999999999999999999999987654 99999999999999999999999999


Q ss_pred             HHHHHHHHHHHHhCCC-eEEEEEecCccccCccccccc
Q 044010          203 ALVLFFETLRVELGSD-VGVTIVTPGFIESELTQGKFL  239 (248)
Q Consensus       203 al~~l~~~la~~~~~~-i~v~~v~pg~v~T~~~~~~~~  239 (248)
                      |+++|++++|.|+++. ||||+|+||+++|+|.+....
T Consensus       165 al~~ltr~lA~el~~~gIrVN~V~PG~v~T~~~~~~~~  202 (251)
T d2c07a1         165 GVIGFTKSLAKELASRNITVNAIAPGFISSDMTDKISE  202 (251)
T ss_dssp             HHHHHHHHHHHHHGGGTEEEEEEEECSBCC-----CCH
T ss_pred             HHHHHHHHHHHHhhhhCeEEEEEccCCEecccccccCH
Confidence            9999999999999885 999999999999999876543

>d1xq1a_ c.2.1.2 (A:) Tropinone reductase {Thale cress (Arabidopsis thaliana) [TaxId: 3702]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Tropinone reductase
species: Thale cress (Arabidopsis thaliana) [TaxId: 3702]

Probab=100.00  E-value=9.9e-46  Score=309.52  Aligned_cols=197  Identities=29%  Similarity=0.400  Sum_probs=160.6

Q ss_pred             CCCCCEEEEcCCCChHHHHHHHHHHHcCCeEEEEeCCcchHHHHHHHHHhhCCCcEEEEEccCCCHHHHHHHHHHHHhHc
Q 044010           44 DVSGKVVIITGASSGIGEHLAYEYARRGACLALCARREKSLEEVADTAREIGSPDVITIRADVSKVDDCRSLVEETMNHF  123 (248)
Q Consensus        44 ~~~~k~~lVtGg~~gIG~aia~~l~~~G~~V~l~~r~~~~~~~~~~~l~~~~~~~v~~~~~D~~~~~~~~~~~~~~~~~~  123 (248)
                      +++||++|||||++|||+++|++|+++|++|++++|+++++++..+++++.+. ++..+.||++++++++++++++.+++
T Consensus         5 ~LkgK~alVTGas~GIG~aiA~~la~~Ga~V~~~~r~~~~l~~~~~~~~~~~~-~~~~~~~Dv~~~~~v~~~~~~~~~~~   83 (259)
T d1xq1a_           5 SLKAKTVLVTGGTKGIGHAIVEEFAGFGAVIHTCARNEYELNECLSKWQKKGF-QVTGSVCDASLRPEREKLMQTVSSMF   83 (259)
T ss_dssp             CCTTCEEEETTTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHTTC-CEEEEECCTTSHHHHHHHHHHHHHHH
T ss_pred             CCCCCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHhcCC-ceEEEeccCCCHHHHHHHHHHHHHHh
Confidence            68999999999999999999999999999999999999999999999987765 79999999999999999999999998


Q ss_pred             -CCccEEEEccccCCcccccccCChHHHHHHHHhhhHHHHHHHHHHhhhhhhcC-CeEEEEcCccccccCCCCccchHHH
Q 044010          124 -GRLDHLVNNAGISSVALFEDIVNITDFKQIMNINFWGSVYTTRFAVPHLRYTK-GKIVVLSSAASWLTAPRMSFYNASK  201 (248)
Q Consensus       124 -g~id~vv~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~-g~iV~isS~~~~~~~~~~~~Y~~sK  201 (248)
                       |++|++|||||...+.++.+ .+.++|++.+++|+.++++++|++.|.|++++ |+||++||..+..+.++..+|++||
T Consensus        84 ~g~idilvnnAG~~~~~~~~~-~~~~~~~~~~~vNl~g~~~~~~~~~~~m~~~~~G~Iv~isS~~~~~~~~~~~~Y~asK  162 (259)
T d1xq1a_          84 GGKLDILINNLGAIRSKPTLD-YTAEDFSFHISTNLESAYHLSQLAHPLLKASGCGNIIFMSSIAGVVSASVGSIYSATK  162 (259)
T ss_dssp             TTCCSEEEEECCC------CC-CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHSSCEEEEEC----------CCHHHHHH
T ss_pred             CCCcccccccccccCCCchhh-CCHHHHHHHHHHHhhhheeeehhhhhcccccccccccccccccccccccccccccccc
Confidence             68999999999988777766 58899999999999999999999999997654 9999999999999999999999999


Q ss_pred             HHHHHHHHHHHHHhCCC-eEEEEEecCccccCcccccccccc
Q 044010          202 AALVLFFETLRVELGSD-VGVTIVTPGFIESELTQGKFLTGR  242 (248)
Q Consensus       202 aal~~l~~~la~~~~~~-i~v~~v~pg~v~T~~~~~~~~~~~  242 (248)
                      +|+.+|++++|.|++++ ||||+|+||+|+|+|.+..+.++.
T Consensus       163 aal~~lt~~lA~e~~~~gIrVN~V~PG~i~T~~~~~~~~~~~  204 (259)
T d1xq1a_         163 GALNQLARNLACEWASDGIRANAVAPAVIATPLAEAVYDDEF  204 (259)
T ss_dssp             HHHHHHHHHHHHHHGGGTCEEEEEECCSCC------------
T ss_pred             cchhhhhHHHHHHhcccCeEEEEeccCcccCHHhhhhchHHH
Confidence            99999999999999985 999999999999999987765543

>d1hdca_ c.2.1.2 (A:) 3-alpha,20-beta-hydroxysteroid dehydrogenase {Streptomyces hydrogenans [TaxId: 1905]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: 3-alpha,20-beta-hydroxysteroid dehydrogenase
species: Streptomyces hydrogenans [TaxId: 1905]

Probab=100.00  E-value=8.3e-46  Score=308.91  Aligned_cols=193  Identities=31%  Similarity=0.425  Sum_probs=177.4

Q ss_pred             CCCCCEEEEcCCCChHHHHHHHHHHHcCCeEEEEeCCcchHHHHHHHHHhhCCCcEEEEEccCCCHHHHHHHHHHHHhHc
Q 044010           44 DVSGKVVIITGASSGIGEHLAYEYARRGACLALCARREKSLEEVADTAREIGSPDVITIRADVSKVDDCRSLVEETMNHF  123 (248)
Q Consensus        44 ~~~~k~~lVtGg~~gIG~aia~~l~~~G~~V~l~~r~~~~~~~~~~~l~~~~~~~v~~~~~D~~~~~~~~~~~~~~~~~~  123 (248)
                      |++||++|||||++|||+++|++|+++|++|++++|+.+++++..+++   + .++.++++|++++++++++++++.+++
T Consensus         2 dL~gK~alVTGas~GIG~aia~~la~~Ga~V~~~~r~~~~~~~~~~~~---~-~~~~~~~~Dv~~~~~v~~~~~~~~~~~   77 (254)
T d1hdca_           2 DLSGKTVIITGGARGLGAEAARQAVAAGARVVLADVLDEEGAATAREL---G-DAARYQHLDVTIEEDWQRVVAYAREEF   77 (254)
T ss_dssp             CCCCSEEEEETTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHTT---G-GGEEEEECCTTCHHHHHHHHHHHHHHH
T ss_pred             CCCCCEEEEeCcCCHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHh---C-CceEEEEcccCCHHHHHHHHHHHHHHc
Confidence            799999999999999999999999999999999999988777666554   2 378899999999999999999999999


Q ss_pred             CCccEEEEccccCCcccccccCChHHHHHHHHhhhHHHHHHHHHHhhhhhhcC-CeEEEEcCccccccCCCCccchHHHH
Q 044010          124 GRLDHLVNNAGISSVALFEDIVNITDFKQIMNINFWGSVYTTRFAVPHLRYTK-GKIVVLSSAASWLTAPRMSFYNASKA  202 (248)
Q Consensus       124 g~id~vv~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~-g~iV~isS~~~~~~~~~~~~Y~~sKa  202 (248)
                      |++|++|||||.....++.+ .+.++|++.+++|+.++++++|+++|.|++++ |+||++||.++..+.++.++|++||+
T Consensus        78 g~iDilVnnAg~~~~~~~~~-~~~~~~~~~~~vN~~~~~~~~~~~~p~m~~~~~G~II~isS~~~~~~~~~~~~Y~asKa  156 (254)
T d1hdca_          78 GSVDGLVNNAGISTGMFLET-ESVERFRKVVEINLTGVFIGMKTVIPAMKDAGGGSIVNISSAAGLMGLALTSSYGASKW  156 (254)
T ss_dssp             SCCCEEEECCCCCCCSCGGG-SCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEEECCGGGTSCCTTCHHHHHHHH
T ss_pred             CCccEEEecCcccccccccc-ccccccchhhhHHhhHHHHHHHHHHHHHhhcCCCeecccccchhcccccchhhHHHHHH
Confidence            99999999999988777666 58899999999999999999999999987554 99999999999999999999999999


Q ss_pred             HHHHHHHHHHHHhCCC-eEEEEEecCccccCccccccccc
Q 044010          203 ALVLFFETLRVELGSD-VGVTIVTPGFIESELTQGKFLTG  241 (248)
Q Consensus       203 al~~l~~~la~~~~~~-i~v~~v~pg~v~T~~~~~~~~~~  241 (248)
                      |+++|+++||.|++++ ||||+|+||+++|+|..+...+.
T Consensus       157 al~~lt~~lA~e~a~~gIrVN~I~PG~v~T~~~~~~~~~~  196 (254)
T d1hdca_         157 GVRGLSKLAAVELGTDRIRVNSVHPGMTYTPMTAETGIRQ  196 (254)
T ss_dssp             HHHHHHHHHHHHHGGGTEEEEEEEECSBCCHHHHHHTCCC
T ss_pred             HHHHHHHHHHHHhCCCceEEEEeeeCcccCccchhcCHHH
Confidence            9999999999999885 99999999999999987665443

>d1zema1 c.2.1.2 (A:3-262) Xylitol dehydrogenase {Gluconobacter oxydans [TaxId: 442]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Xylitol dehydrogenase
species: Gluconobacter oxydans [TaxId: 442]

Probab=100.00  E-value=6.4e-46  Score=310.90  Aligned_cols=192  Identities=28%  Similarity=0.449  Sum_probs=178.3

Q ss_pred             CCCCCEEEEcCCCChHHHHHHHHHHHcCCeEEEEeCCcchHHHHHHHHHhhCCCcEEEEEccCCCHHHHHHHHHHHHhHc
Q 044010           44 DVSGKVVIITGASSGIGEHLAYEYARRGACLALCARREKSLEEVADTAREIGSPDVITIRADVSKVDDCRSLVEETMNHF  123 (248)
Q Consensus        44 ~~~~k~~lVtGg~~gIG~aia~~l~~~G~~V~l~~r~~~~~~~~~~~l~~~~~~~v~~~~~D~~~~~~~~~~~~~~~~~~  123 (248)
                      +++||++|||||++|||+++|++|+++|++|++++|+++++++..+++++.+. ++..+.||++|+++++++++++.+++
T Consensus         2 rL~gK~alITGas~GIG~aia~~la~~Ga~V~~~~r~~~~l~~~~~~~~~~g~-~~~~~~~Dv~~~~~v~~~~~~~~~~~   80 (260)
T d1zema1           2 KFNGKVCLVTGAGGNIGLATALRLAEEGTAIALLDMNREALEKAEASVREKGV-EARSYVCDVTSEEAVIGTVDSVVRDF   80 (260)
T ss_dssp             TTTTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHTTTS-CEEEEECCTTCHHHHHHHHHHHHHHH
T ss_pred             CCCCCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHhcCC-cEEEEEccCCCHHHHHHHHHHHHHHh
Confidence            68999999999999999999999999999999999999999999999987765 78999999999999999999999999


Q ss_pred             CCccEEEEccccCCc-ccccccCChHHHHHHHHhhhHHHHHHHHHHhhhhhh-cCCeEEEEcCccccccCCCCccchHHH
Q 044010          124 GRLDHLVNNAGISSV-ALFEDIVNITDFKQIMNINFWGSVYTTRFAVPHLRY-TKGKIVVLSSAASWLTAPRMSFYNASK  201 (248)
Q Consensus       124 g~id~vv~~ag~~~~-~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~-~~g~iV~isS~~~~~~~~~~~~Y~~sK  201 (248)
                      |++|++|||||...+ .++.+ .+.++|++.+++|+.++++++|++.|.|.+ .+|+||++||..+..+.+++++|++||
T Consensus        81 g~iDilVnnaG~~~~~~~~~~-~~~~~~~~~~~vnl~~~~~~~~~~~~~m~~~~~G~II~isS~~~~~~~~~~~~Y~asK  159 (260)
T d1zema1          81 GKIDFLFNNAGYQGAFAPVQD-YPSDDFARVLTINVTGAFHVLKAVSRQMITQNYGRIVNTASMAGVKGPPNMAAYGTSK  159 (260)
T ss_dssp             SCCCEEEECCCCCCCCBCGGG-CCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEEECCHHHHSCCTTBHHHHHHH
T ss_pred             CCCCeehhhhccccccCcccc-ccHHHHHhhccccccccccchhhHHhhhhhhcCCCCCeeechhhccCCcchHHHHHHH
Confidence            999999999998755 44544 688999999999999999999999999864 459999999999999999999999999


Q ss_pred             HHHHHHHHHHHHHhCCC-eEEEEEecCccccCccccc
Q 044010          202 AALVLFFETLRVELGSD-VGVTIVTPGFIESELTQGK  237 (248)
Q Consensus       202 aal~~l~~~la~~~~~~-i~v~~v~pg~v~T~~~~~~  237 (248)
                      +|+++|++++|.|++++ ||||+|+||+|+|+|..+.
T Consensus       160 aal~~ltk~lA~el~~~gIrVN~I~PG~v~T~~~~~~  196 (260)
T d1zema1         160 GAIIALTETAALDLAPYNIRVNAISPGYMGPGFMWER  196 (260)
T ss_dssp             HHHHHHHHHHHHHHGGGTEEEEEEEECSBCSSHHHHH
T ss_pred             HHHHHHHHHHHHHhhhhCCEEEEeccCcccCcchhhc
Confidence            99999999999999985 9999999999999986543

>d2ae2a_ c.2.1.2 (A:) Tropinone reductase {Jimsonweed (Datura stramonium), II [TaxId: 4076]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Tropinone reductase
species: Jimsonweed (Datura stramonium), II [TaxId: 4076]

Probab=100.00  E-value=1.1e-45  Score=309.28  Aligned_cols=195  Identities=31%  Similarity=0.455  Sum_probs=181.1

Q ss_pred             cCCCCCEEEEcCCCChHHHHHHHHHHHcCCeEEEEeCCcchHHHHHHHHHhhCCCcEEEEEccCCCHHHHHHHHHHHHhH
Q 044010           43 EDVSGKVVIITGASSGIGEHLAYEYARRGACLALCARREKSLEEVADTAREIGSPDVITIRADVSKVDDCRSLVEETMNH  122 (248)
Q Consensus        43 ~~~~~k~~lVtGg~~gIG~aia~~l~~~G~~V~l~~r~~~~~~~~~~~l~~~~~~~v~~~~~D~~~~~~~~~~~~~~~~~  122 (248)
                      .+++||++|||||++|||+++|++|+++|++|++.+|+++++++..+++++.+. ++.++.+|++|+++++++++++.++
T Consensus         4 f~L~GK~alITGas~GIG~aia~~la~~Ga~V~~~~r~~~~l~~~~~~~~~~g~-~~~~~~~Dv~~~~~v~~~~~~~~~~   82 (259)
T d2ae2a_           4 WNLEGCTALVTGGSRGIGYGIVEELASLGASVYTCSRNQKELNDCLTQWRSKGF-KVEASVCDLSSRSERQELMNTVANH   82 (259)
T ss_dssp             TCCTTCEEEEESCSSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHTTC-EEEEEECCTTCHHHHHHHHHHHHHH
T ss_pred             cCCCCCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHhcCC-CceEEEeeCCCHHHHHHHHHHHHHH
Confidence            378999999999999999999999999999999999999999999999988764 7889999999999999999999999


Q ss_pred             cC-CccEEEEccccCCcccccccCChHHHHHHHHhhhHHHHHHHHHHhhhhhhc-CCeEEEEcCccccccCCCCccchHH
Q 044010          123 FG-RLDHLVNNAGISSVALFEDIVNITDFKQIMNINFWGSVYTTRFAVPHLRYT-KGKIVVLSSAASWLTAPRMSFYNAS  200 (248)
Q Consensus       123 ~g-~id~vv~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~-~g~iV~isS~~~~~~~~~~~~Y~~s  200 (248)
                      ++ ++|++|||||.....++.+ .+.++|++.+++|+.++++++|.+.|.|+++ +|+||++||..+..+.++..+|++|
T Consensus        83 ~~~~idilvnnAG~~~~~~~~~-~~~e~~~~~~~vNl~~~~~~~~~~~~~m~~~~~G~Ii~isS~~~~~~~~~~~~Y~as  161 (259)
T d2ae2a_          83 FHGKLNILVNNAGIVIYKEAKD-YTVEDYSLIMSINFEAAYHLSVLAHPFLKASERGNVVFISSVSGALAVPYEAVYGAT  161 (259)
T ss_dssp             TTTCCCEEEECCCCCCCCCGGG-CCHHHHHHHHHHHTHHHHHHHHHHHHHHHHTSSEEEEEECCGGGTSCCTTCHHHHHH
T ss_pred             hCCCceEEEECCceeccCcccc-CCHHHHHHHHhcccceeEEEEeeccchhhhhcccccccccccccccccccccchHHH
Confidence            87 7999999999988777666 5889999999999999999999999998765 4999999999999999999999999


Q ss_pred             HHHHHHHHHHHHHHhCCC-eEEEEEecCccccCccccccc
Q 044010          201 KAALVLFFETLRVELGSD-VGVTIVTPGFIESELTQGKFL  239 (248)
Q Consensus       201 Kaal~~l~~~la~~~~~~-i~v~~v~pg~v~T~~~~~~~~  239 (248)
                      |+|+++|+|++|.|++++ ||||+|+||+|+|+|.+....
T Consensus       162 Kaal~~lt~~lA~el~~~gIrVN~I~PG~i~T~~~~~~~~  201 (259)
T d2ae2a_         162 KGAMDQLTRCLAFEWAKDNIRVNGVGPGVIATSLVEMTIQ  201 (259)
T ss_dssp             HHHHHHHHHHHHHHTGGGTEEEEEEEECSBCSHHHHHHTT
T ss_pred             HHHHHHHHHHHHHHhCcCceEEEEeeeCcccCHHHHhhhh
Confidence            999999999999999885 999999999999999765543

>d1geea_ c.2.1.2 (A:) Glucose dehydrogenase {Bacillus megaterium [TaxId: 1404]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Glucose dehydrogenase
species: Bacillus megaterium [TaxId: 1404]

Probab=100.00  E-value=2e-45  Score=307.88  Aligned_cols=195  Identities=28%  Similarity=0.527  Sum_probs=179.3

Q ss_pred             cCCCCCEEEEcCCCChHHHHHHHHHHHcCCeEEEEeCCc-chHHHHHHHHHhhCCCcEEEEEccCCCHHHHHHHHHHHHh
Q 044010           43 EDVSGKVVIITGASSGIGEHLAYEYARRGACLALCARRE-KSLEEVADTAREIGSPDVITIRADVSKVDDCRSLVEETMN  121 (248)
Q Consensus        43 ~~~~~k~~lVtGg~~gIG~aia~~l~~~G~~V~l~~r~~-~~~~~~~~~l~~~~~~~v~~~~~D~~~~~~~~~~~~~~~~  121 (248)
                      .|++||++|||||++|||+++|++|+++|++|++++|+. +.+++..+++++.+. ++..+++|++|+++++++++++.+
T Consensus         3 ~dL~gK~alITGas~GIG~aia~~la~~G~~Vv~~~r~~~~~~~~~~~~~~~~g~-~~~~~~~Dvt~~~~v~~~~~~~~~   81 (261)
T d1geea_           3 KDLEGKVVVITGSSTGLGKSMAIRFATEKAKVVVNYRSKEDEANSVLEEIKKVGG-EAIAVKGDVTVESDVINLVQSAIK   81 (261)
T ss_dssp             GGGTTCEEEETTCSSHHHHHHHHHHHHTTCEEEEEESSCHHHHHHHHHHHHHTTC-EEEEEECCTTSHHHHHHHHHHHHH
T ss_pred             CCCCCCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEeCCcHHHHHHHHHHHHhcCC-cEEEEEccCCCHHHHHHHHHHHHH
Confidence            489999999999999999999999999999999999985 467778888887665 889999999999999999999999


Q ss_pred             HcCCccEEEEccccCCcccccccCChHHHHHHHHhhhHHHHHHHHHHhhhhhhcC--CeEEEEcCccccccCCCCccchH
Q 044010          122 HFGRLDHLVNNAGISSVALFEDIVNITDFKQIMNINFWGSVYTTRFAVPHLRYTK--GKIVVLSSAASWLTAPRMSFYNA  199 (248)
Q Consensus       122 ~~g~id~vv~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~--g~iV~isS~~~~~~~~~~~~Y~~  199 (248)
                      ++|++|++|||||...+.++.+ .+.++|++.+++|+.++++++|++.|.|.+++  ++||++||.++..+.++..+|++
T Consensus        82 ~~G~iDiLVnnAG~~~~~~~~~-~~~~~~~~~~~vNl~g~~~~~~~~~~~m~~~~~g~~Iv~isS~~~~~~~~~~~~Y~a  160 (261)
T d1geea_          82 EFGKLDVMINNAGLENPVSSHE-MSLSDWNKVIDTNLTGAFLGSREAIKYFVENDIKGTVINMSSVHEKIPWPLFVHYAA  160 (261)
T ss_dssp             HHSCCCEEEECCCCCCCCCGGG-CCHHHHHHHHHHHTHHHHHHHHHHHHHHHHTTCCCEEEEECCGGGTSCCTTCHHHHH
T ss_pred             HhCCCCEeeccceecCCcchhh-cCHHHHHHHHHHhcccchhHHHHHhhhhccccccccccccccchhcccCcccccccc
Confidence            9999999999999988777766 68899999999999999999999999987554  46999999999999999999999


Q ss_pred             HHHHHHHHHHHHHHHhCCC-eEEEEEecCccccCccccccc
Q 044010          200 SKAALVLFFETLRVELGSD-VGVTIVTPGFIESELTQGKFL  239 (248)
Q Consensus       200 sKaal~~l~~~la~~~~~~-i~v~~v~pg~v~T~~~~~~~~  239 (248)
                      ||+|+++|++++|.|++++ ||||+|+||+|+|+|....+.
T Consensus       161 sKaal~~lt~~lA~e~~~~gIrVN~I~PG~v~T~~~~~~~~  201 (261)
T d1geea_         161 SKGGMKLMTETLALEYAPKGIRVNNIGPGAINTPINAEKFA  201 (261)
T ss_dssp             HHHHHHHHHHHHHHHHGGGTCEEEEEEECSBCSGGGHHHHH
T ss_pred             CCccchhhHHHHHHHhhhhCcEEEEEeeCcCcCHhHhhhcC
Confidence            9999999999999999985 999999999999999876543

>d1ydea1 c.2.1.2 (A:4-253) Retinal dehydrogenase/reductase 3 {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Retinal dehydrogenase/reductase 3
species: Human (Homo sapiens) [TaxId: 9606]

Probab=100.00  E-value=5.7e-46  Score=309.31  Aligned_cols=190  Identities=29%  Similarity=0.482  Sum_probs=174.0

Q ss_pred             cCCCCCEEEEcCCCChHHHHHHHHHHHcCCeEEEEeCCcchHHHHHHHHHhhCCCcEEEEEccCCCHHHHHHHHHHHHhH
Q 044010           43 EDVSGKVVIITGASSGIGEHLAYEYARRGACLALCARREKSLEEVADTAREIGSPDVITIRADVSKVDDCRSLVEETMNH  122 (248)
Q Consensus        43 ~~~~~k~~lVtGg~~gIG~aia~~l~~~G~~V~l~~r~~~~~~~~~~~l~~~~~~~v~~~~~D~~~~~~~~~~~~~~~~~  122 (248)
                      .+++||++|||||++|||+++|++|+++|++|++++|+++++++..+++    + ++.++.||++|+++++++++++.++
T Consensus         2 ~rl~GK~alITGas~GIG~aia~~la~~Ga~V~i~~r~~~~~~~~~~~~----~-~~~~~~~Dvs~~~~v~~~~~~~~~~   76 (250)
T d1ydea1           2 TRYAGKVVVVTGGGRGIGAGIVRAFVNSGARVVICDKDESGGRALEQEL----P-GAVFILCDVTQEDDVKTLVSETIRR   76 (250)
T ss_dssp             CTTTTCEEEEETCSSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHC----T-TEEEEECCTTSHHHHHHHHHHHHHH
T ss_pred             CCCCCCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHhc----C-CCeEEEccCCCHHHHHHHHHHHHHh
Confidence            3789999999999999999999999999999999999988777665554    2 5788999999999999999999999


Q ss_pred             cCCccEEEEccccCCcccccccCChHHHHHHHHhhhHHHHHHHHHHhhhhhhcCCeEEEEcCccccccCCCCccchHHHH
Q 044010          123 FGRLDHLVNNAGISSVALFEDIVNITDFKQIMNINFWGSVYTTRFAVPHLRYTKGKIVVLSSAASWLTAPRMSFYNASKA  202 (248)
Q Consensus       123 ~g~id~vv~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~g~iV~isS~~~~~~~~~~~~Y~~sKa  202 (248)
                      +|++|++|||||........++.+.++|++.+++|+.++++++|++.|.|++++|+||++||..+..+.+...+|++||+
T Consensus        77 ~g~iDilVnnAG~~~~~~~~~~~~~~~~~~~~~vNl~g~~~~~~~~~p~m~~~~G~Ii~isS~~~~~~~~~~~~Y~asKa  156 (250)
T d1ydea1          77 FGRLDCVVNNAGHHPPPQRPEETSAQGFRQLLELNLLGTYTLTKLALPYLRKSQGNVINISSLVGAIGQAQAVPYVATKG  156 (250)
T ss_dssp             HSCCCEEEECCCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEECCHHHHHCCTTCHHHHHHHH
T ss_pred             cCCCCEEEecccccccccccccccHHHHHHHHHHhhhhHHHHHHHhhHHHHhCCCCCcccccccccccccCcchhHHHHh
Confidence            99999999999977554444446889999999999999999999999999888899999999999999999999999999


Q ss_pred             HHHHHHHHHHHHhCCC-eEEEEEecCccccCccccc
Q 044010          203 ALVLFFETLRVELGSD-VGVTIVTPGFIESELTQGK  237 (248)
Q Consensus       203 al~~l~~~la~~~~~~-i~v~~v~pg~v~T~~~~~~  237 (248)
                      |+++|++++|+|++++ ||||+|+||+|+|+|.+..
T Consensus       157 al~~lt~~lA~e~a~~gIrVN~I~PG~i~T~~~~~~  192 (250)
T d1ydea1         157 AVTAMTKALALDESPYGVRVNCISPGNIWTPLWEEL  192 (250)
T ss_dssp             HHHHHHHHHHHHHGGGTCEEEEEEECSBCCHHHHHH
T ss_pred             hHHHHHHHHHHHhcccCeEEEEEeeCCCCChhHHHH
Confidence            9999999999999885 9999999999999997654

>d2rhca1 c.2.1.2 (A:5-261) beta-keto acyl carrier protein reductase {Streptomyces coelicolor [TaxId: 1902]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: beta-keto acyl carrier protein reductase
species: Streptomyces coelicolor [TaxId: 1902]

Probab=100.00  E-value=3.2e-45  Score=306.20  Aligned_cols=190  Identities=28%  Similarity=0.411  Sum_probs=177.4

Q ss_pred             CCCEEEEcCCCChHHHHHHHHHHHcCCeEEEEeCCcchHHHHHHHHHhhCCCcEEEEEccCCCHHHHHHHHHHHHhHcCC
Q 044010           46 SGKVVIITGASSGIGEHLAYEYARRGACLALCARREKSLEEVADTAREIGSPDVITIRADVSKVDDCRSLVEETMNHFGR  125 (248)
Q Consensus        46 ~~k~~lVtGg~~gIG~aia~~l~~~G~~V~l~~r~~~~~~~~~~~l~~~~~~~v~~~~~D~~~~~~~~~~~~~~~~~~g~  125 (248)
                      .||++|||||++|||+++|++|+++|++|++++|+++++++..+++++.+. ++.++++|++|+++++++++++.+++|+
T Consensus         1 DgKValITGas~GIG~aia~~la~~Ga~V~i~~r~~~~l~~~~~~l~~~g~-~~~~~~~Dvs~~~~v~~~~~~~~~~~g~   79 (257)
T d2rhca1           1 DSEVALVTGATSGIGLEIARRLGKEGLRVFVCARGEEGLRTTLKELREAGV-EADGRTCDVRSVPEIEALVAAVVERYGP   79 (257)
T ss_dssp             CCCEEEEESCSSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHTTC-CEEEEECCTTCHHHHHHHHHHHHHHTCS
T ss_pred             CCCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHhcCC-cEEEEEeecCCHHHHHHHHHHHHHHhCC
Confidence            489999999999999999999999999999999999999999999987765 7999999999999999999999999999


Q ss_pred             ccEEEEccccCCcccccccCChHHHHHHHHhhhHHHHHHHHHHhhhh--hhc-CCeEEEEcCccccccCCCCccchHHHH
Q 044010          126 LDHLVNNAGISSVALFEDIVNITDFKQIMNINFWGSVYTTRFAVPHL--RYT-KGKIVVLSSAASWLTAPRMSFYNASKA  202 (248)
Q Consensus       126 id~vv~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~--~~~-~g~iV~isS~~~~~~~~~~~~Y~~sKa  202 (248)
                      +|++|||||.....++.+ .+.++|++.+++|+.++++++|+++|+|  .++ .|+||++||..+..+.+++.+|++||+
T Consensus        80 iDilVnnAG~~~~~~~~~-~~~e~~~~~~~vNl~g~~~~~~~~~p~~~~~~~~~g~Ii~i~S~~~~~~~~~~~~Y~asKa  158 (257)
T d2rhca1          80 VDVLVNNAGRPGGGATAE-LADELWLDVVETNLTGVFRVTKQVLKAGGMLERGTGRIVNIASTGGKQGVVHAAPYSASKH  158 (257)
T ss_dssp             CSEEEECCCCCCCSCGGG-CCHHHHHHHHHHHTHHHHHHHHHHHTTTSHHHHTEEEEEEECCGGGTSCCTTCHHHHHHHH
T ss_pred             CCEEEecccccCCCChHH-cCHHHHHHHHHHHhhhhhHHHHHHhHHHHHHhcCCcccccccccccccccccchhHHHHHH
Confidence            999999999988777766 5889999999999999999999999973  433 489999999999999999999999999


Q ss_pred             HHHHHHHHHHHHhCCC-eEEEEEecCccccCccccc
Q 044010          203 ALVLFFETLRVELGSD-VGVTIVTPGFIESELTQGK  237 (248)
Q Consensus       203 al~~l~~~la~~~~~~-i~v~~v~pg~v~T~~~~~~  237 (248)
                      |+.+|+++||.|++++ ||||+|+||+|+|+|.+..
T Consensus       159 al~~ltk~lA~el~~~gIrVN~I~PG~i~T~~~~~~  194 (257)
T d2rhca1         159 GVVGFTKALGLELARTGITVNAVCPGFVETPMAASV  194 (257)
T ss_dssp             HHHHHHHHHHHHTTTSEEEEEEEEECSBCSHHHHHH
T ss_pred             HHHHHHHHHHHHhhhhCcEEEEEeeCCCCCHHHHHH
Confidence            9999999999999986 9999999999999998654

>d2bd0a1 c.2.1.2 (A:2-241) Bacterial sepiapterin reductase {Chlorobium tepidum [TaxId: 1097]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Bacterial sepiapterin reductase
species: Chlorobium tepidum [TaxId: 1097]

Probab=100.00  E-value=7.8e-45  Score=300.82  Aligned_cols=191  Identities=30%  Similarity=0.420  Sum_probs=178.0

Q ss_pred             CEEEEcCCCChHHHHHHHHHHHcCCe-------EEEEeCCcchHHHHHHHHHhhCCCcEEEEEccCCCHHHHHHHHHHHH
Q 044010           48 KVVIITGASSGIGEHLAYEYARRGAC-------LALCARREKSLEEVADTAREIGSPDVITIRADVSKVDDCRSLVEETM  120 (248)
Q Consensus        48 k~~lVtGg~~gIG~aia~~l~~~G~~-------V~l~~r~~~~~~~~~~~l~~~~~~~v~~~~~D~~~~~~~~~~~~~~~  120 (248)
                      +++|||||++|||+++|++|+++|++       |++.+|+.+++++..+++++.+. ++.++.||++|+++++++++++.
T Consensus         2 ~VvlITGas~GIG~aia~~la~~G~~~~~~~~~v~~~~r~~~~l~~~~~~~~~~g~-~~~~~~~Dvt~~~~v~~~~~~~~   80 (240)
T d2bd0a1           2 HILLITGAGKGIGRAIALEFARAARHHPDFEPVLVLSSRTAADLEKISLECRAEGA-LTDTITADISDMADVRRLTTHIV   80 (240)
T ss_dssp             EEEEEETTTSHHHHHHHHHHHHHTTTCTTCCEEEEEEESCHHHHHHHHHHHHTTTC-EEEEEECCTTSHHHHHHHHHHHH
T ss_pred             CEEEEccCCCHHHHHHHHHHHHhCccccccCcEEEEEeCCHHHHHHHHHHHHhcCC-cEEEEEecCCCHHHHHHHHHHHH
Confidence            56899999999999999999999997       99999999999999999987764 88999999999999999999999


Q ss_pred             hHcCCccEEEEccccCCcccccccCChHHHHHHHHhhhHHHHHHHHHHhhhhhhcC-CeEEEEcCccccccCCCCccchH
Q 044010          121 NHFGRLDHLVNNAGISSVALFEDIVNITDFKQIMNINFWGSVYTTRFAVPHLRYTK-GKIVVLSSAASWLTAPRMSFYNA  199 (248)
Q Consensus       121 ~~~g~id~vv~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~-g~iV~isS~~~~~~~~~~~~Y~~  199 (248)
                      +++|++|++|||||.....++.+ .+.++|++.+++|+.|+++++|+++|.|++++ |+||++||.++..+.|++++|++
T Consensus        81 ~~~g~iDilvnnAg~~~~~~~~~-~~~~~~~~~~~vNl~g~~~~~~~~~~~m~~~~~G~Ii~isS~~~~~~~~~~~~Y~a  159 (240)
T d2bd0a1          81 ERYGHIDCLVNNAGVGRFGALSD-LTEEDFDYTMNTNLKGTFFLTQALFALMERQHSGHIFFITSVAATKAFRHSSIYCM  159 (240)
T ss_dssp             HHTSCCSEEEECCCCCCCCCGGG-CCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEEECCGGGTSCCTTCHHHHH
T ss_pred             HHcCCcceeecccccccCCcccc-CCHHHHhhcCCEeehHHHHHHHHHhHHHHhcCCCceEEEechhhcCCCCCChHHHH
Confidence            99999999999999988777766 58899999999999999999999999997654 89999999999999999999999


Q ss_pred             HHHHHHHHHHHHHHHhCCC-eEEEEEecCccccCcccccccc
Q 044010          200 SKAALVLFFETLRVELGSD-VGVTIVTPGFIESELTQGKFLT  240 (248)
Q Consensus       200 sKaal~~l~~~la~~~~~~-i~v~~v~pg~v~T~~~~~~~~~  240 (248)
                      ||+|+.+|+++++.|+++. ||||+|+||+++|+|+++...+
T Consensus       160 sK~al~~lt~~la~el~~~gIrvn~i~PG~v~T~~~~~~~~~  201 (240)
T d2bd0a1         160 SKFGQRGLVETMRLYARKCNVRITDVQPGAVYTPMWGKVDDE  201 (240)
T ss_dssp             HHHHHHHHHHHHHHHHTTTTEEEEEEEECCBCSTTTCCCCST
T ss_pred             HHHHHHHHHHHHHHHhCcCCeEEEEeeeCcccCchhhhcCHh
Confidence            9999999999999999885 9999999999999998876443

>d1zk4a1 c.2.1.2 (A:1-251) R-specific alcohol dehydrogenase {Lactobacillus brevis [TaxId: 1580]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: R-specific alcohol dehydrogenase
species: Lactobacillus brevis [TaxId: 1580]

Probab=100.00  E-value=5.3e-45  Score=303.77  Aligned_cols=195  Identities=27%  Similarity=0.459  Sum_probs=179.1

Q ss_pred             CCCCCEEEEcCCCChHHHHHHHHHHHcCCeEEEEeCCcchHHHHHHHHHhhCCCcEEEEEccCCCHHHHHHHHHHHHhHc
Q 044010           44 DVSGKVVIITGASSGIGEHLAYEYARRGACLALCARREKSLEEVADTAREIGSPDVITIRADVSKVDDCRSLVEETMNHF  123 (248)
Q Consensus        44 ~~~~k~~lVtGg~~gIG~aia~~l~~~G~~V~l~~r~~~~~~~~~~~l~~~~~~~v~~~~~D~~~~~~~~~~~~~~~~~~  123 (248)
                      +++||++|||||++|||+++|++|+++|++|++++|+.+++++..+++..  +.++.++.+|++|+++++++++++.+++
T Consensus         3 rL~gK~alVTGas~GIG~aia~~la~~Ga~V~~~~r~~~~~~~~~~~~~~--~~~~~~~~~Dv~~~~~v~~~~~~~~~~~   80 (251)
T d1zk4a1           3 RLDGKVAIITGGTLGIGLAIATKFVEEGAKVMITGRHSDVGEKAAKSVGT--PDQIQFFQHDSSDEDGWTKLFDATEKAF   80 (251)
T ss_dssp             TTTTCEEEETTTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHCC--TTTEEEEECCTTCHHHHHHHHHHHHHHH
T ss_pred             CCCCCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHhCC--CCcEEEEEccCCCHHHHHHHHHHHHHHh
Confidence            68999999999999999999999999999999999999999888888754  2378999999999999999999999999


Q ss_pred             CCccEEEEccccCCcccccccCChHHHHHHHHhhhHHHHHHHHHHhhhhhhcC--CeEEEEcCccccccCCCCccchHHH
Q 044010          124 GRLDHLVNNAGISSVALFEDIVNITDFKQIMNINFWGSVYTTRFAVPHLRYTK--GKIVVLSSAASWLTAPRMSFYNASK  201 (248)
Q Consensus       124 g~id~vv~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~--g~iV~isS~~~~~~~~~~~~Y~~sK  201 (248)
                      |++|++|||||...+.++.+ .+.++|++.+++|+.++++++|+++|.|++++  |+||++||..+..+.|+..+|++||
T Consensus        81 G~iDiLVnnAg~~~~~~~~~-~~~~~~~~~~~vnl~g~~~~~~~~~~~m~~~~~gg~Ii~isS~~~~~~~~~~~~Y~asK  159 (251)
T d1zk4a1          81 GPVSTLVNNAGIAVNKSVEE-TTTAEWRKLLAVNLDGVFFGTRLGIQRMKNKGLGASIINMSSIEGFVGDPSLGAYNASK  159 (251)
T ss_dssp             SSCCEEEECCCCCCCCCTTT-CCHHHHHHHHHHHTHHHHHHHHHHHHHHTTSSSCEEEEEECCGGGTSCCTTCHHHHHHH
T ss_pred             CCceEEEeccccccccchhc-ccccchhhhccccccccchhHHHHHHHHHhcCCCCceEeeeccceeccCCCchhHHHHH
Confidence            99999999999988877776 58899999999999999999999999997654  5899999999999999999999999


Q ss_pred             HHHHHHHHHHHHHh--CC-CeEEEEEecCccccCccccccccc
Q 044010          202 AALVLFFETLRVEL--GS-DVGVTIVTPGFIESELTQGKFLTG  241 (248)
Q Consensus       202 aal~~l~~~la~~~--~~-~i~v~~v~pg~v~T~~~~~~~~~~  241 (248)
                      +|+.+|++++|.|+  ++ +||||+|+||+++|+|.+....++
T Consensus       160 aal~~lt~~lA~e~~l~~~gIrVN~I~PG~i~T~~~~~~~~~~  202 (251)
T d1zk4a1         160 GAVRIMSKSAALDCALKDYDVRVNTVHPGYIKTPLVDDLPGAE  202 (251)
T ss_dssp             HHHHHHHHHHHHHHHHTTCSEEEEEEEECCBCCHHHHTSTTHH
T ss_pred             HHHhcchHHHHHHHhcCCCcEEEEEEeCCCCCChhHHhcCCHH
Confidence            99999999999984  55 599999999999999988766543

>d1k2wa_ c.2.1.2 (A:) Sorbitol dehydrogenase {Rhodobacter sphaeroides [TaxId: 1063]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Sorbitol dehydrogenase
species: Rhodobacter sphaeroides [TaxId: 1063]

Probab=100.00  E-value=4.7e-45  Score=304.95  Aligned_cols=191  Identities=26%  Similarity=0.415  Sum_probs=175.5

Q ss_pred             cCCCCCEEEEcCCCChHHHHHHHHHHHcCCeEEEEeCCcchHHHHHHHHHhhCCCcEEEEEccCCCHHHHHHHHHHHHhH
Q 044010           43 EDVSGKVVIITGASSGIGEHLAYEYARRGACLALCARREKSLEEVADTAREIGSPDVITIRADVSKVDDCRSLVEETMNH  122 (248)
Q Consensus        43 ~~~~~k~~lVtGg~~gIG~aia~~l~~~G~~V~l~~r~~~~~~~~~~~l~~~~~~~v~~~~~D~~~~~~~~~~~~~~~~~  122 (248)
                      |+++||++|||||++|||+++|++|+++|++|++++|+.+++++..+++   + .++..+.+|++|+++++++++++.++
T Consensus         1 M~L~gK~alVTGas~GIG~aia~~la~~Ga~V~~~~r~~~~l~~~~~~~---~-~~~~~~~~Dvt~~~~v~~~~~~~~~~   76 (256)
T d1k2wa_           1 MRLDGKTALITGSARGIGRAFAEAYVREGARVAIADINLEAARATAAEI---G-PAACAIALDVTDQASIDRCVAELLDR   76 (256)
T ss_dssp             CTTTTEEEEEETCSSHHHHHHHHHHHHTTEEEEEEESCHHHHHHHHHHH---C-TTEEEEECCTTCHHHHHHHHHHHHHH
T ss_pred             CCCCCCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHh---C-CceEEEEeeCCCHHHHHHHHHHHHHH
Confidence            5789999999999999999999999999999999999998888777766   3 37889999999999999999999999


Q ss_pred             cCCccEEEEccccCCcccccccCChHHHHHHHHhhhHHHHHHHHHHhhhhh-hc-CCeEEEEcCccccccCCCCccchHH
Q 044010          123 FGRLDHLVNNAGISSVALFEDIVNITDFKQIMNINFWGSVYTTRFAVPHLR-YT-KGKIVVLSSAASWLTAPRMSFYNAS  200 (248)
Q Consensus       123 ~g~id~vv~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~-~~-~g~iV~isS~~~~~~~~~~~~Y~~s  200 (248)
                      +|++|++|||||.....++.+ .+.++|++.+++|+.++++++|++.|.|. +. +|+||++||..+..+.+++++|++|
T Consensus        77 ~g~iDilVnnAg~~~~~~~~~-~~~~~~~~~~~vNl~g~~~~~~~~~~~~~~~~~~g~Iv~isS~~~~~~~~~~~~Y~as  155 (256)
T d1k2wa_          77 WGSIDILVNNAALFDLAPIVE-ITRESYDRLFAINVSGTLFMMQAVARAMIAGGRGGKIINMASQAGRRGEALVGVYCAT  155 (256)
T ss_dssp             HSCCCEEEECCCCCCCCCGGG-CCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTSCEEEEEECCGGGTSCCTTCHHHHHH
T ss_pred             hCCccEEEeeccccccccccc-CCHHHHHhhhceeeeccccchhhccchhHHhccCCccccccchhhccccccccchhhh
Confidence            999999999999988777666 58899999999999999999999999754 33 4899999999999999999999999


Q ss_pred             HHHHHHHHHHHHHHhCCC-eEEEEEecCccccCcccccc
Q 044010          201 KAALVLFFETLRVELGSD-VGVTIVTPGFIESELTQGKF  238 (248)
Q Consensus       201 Kaal~~l~~~la~~~~~~-i~v~~v~pg~v~T~~~~~~~  238 (248)
                      |+|+++|++++|.|++++ ||||+|+||+++|+|.+...
T Consensus       156 Kaal~~lt~~lA~el~~~gIrVN~V~PG~i~T~~~~~~~  194 (256)
T d1k2wa_         156 KAAVISLTQSAGLNLIRHGINVNAIAPGVVDGEHWDGVD  194 (256)
T ss_dssp             HHHHHHHHHHHHHHHGGGTEEEEEEEECCBCCTTHHHHH
T ss_pred             hhHHHHHHHHHHHHhcccCeEEEEEecCCCCchhhhhhh
Confidence            999999999999999885 99999999999999976543

>d1ulsa_ c.2.1.2 (A:) beta-keto acyl carrier protein reductase {Thermus thermophilus [TaxId: 274]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: beta-keto acyl carrier protein reductase
species: Thermus thermophilus [TaxId: 274]

Probab=100.00  E-value=8.1e-45  Score=301.08  Aligned_cols=190  Identities=29%  Similarity=0.428  Sum_probs=169.9

Q ss_pred             cCCCCCEEEEcCCCChHHHHHHHHHHHcCCeEEEEeCCcchHHHHHHHHHhhCCCcEEEEEccCCCHHHHHHHHHHHHhH
Q 044010           43 EDVSGKVVIITGASSGIGEHLAYEYARRGACLALCARREKSLEEVADTAREIGSPDVITIRADVSKVDDCRSLVEETMNH  122 (248)
Q Consensus        43 ~~~~~k~~lVtGg~~gIG~aia~~l~~~G~~V~l~~r~~~~~~~~~~~l~~~~~~~v~~~~~D~~~~~~~~~~~~~~~~~  122 (248)
                      |+++||++|||||++|||+++|++|+++|++|++++|+++++++..+++      +.+++.||++|+++++++++++.++
T Consensus         1 M~L~gK~~lITGas~GIG~aia~~l~~~G~~V~~~~r~~~~l~~~~~~~------~~~~~~~Dv~~~~~v~~~~~~~~~~   74 (242)
T d1ulsa_           1 MRLKDKAVLITGAAHGIGRATLELFAKEGARLVACDIEEGPLREAAEAV------GAHPVVMDVADPASVERGFAEALAH   74 (242)
T ss_dssp             CTTTTCEEEEESTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHTT------TCEEEECCTTCHHHHHHHHHHHHHH
T ss_pred             CCCCCCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHc------CCeEEEEecCCHHHHHHHHHHHHHh
Confidence            5799999999999999999999999999999999999988777766544      4567899999999999999999999


Q ss_pred             cCCccEEEEccccCCcccccccCChHHHHHHHHhhhHHHHHHHHHHhhhhhhcCCeEEEEcCccccccCCCCccchHHHH
Q 044010          123 FGRLDHLVNNAGISSVALFEDIVNITDFKQIMNINFWGSVYTTRFAVPHLRYTKGKIVVLSSAASWLTAPRMSFYNASKA  202 (248)
Q Consensus       123 ~g~id~vv~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~g~iV~isS~~~~~~~~~~~~Y~~sKa  202 (248)
                      +|++|++|||||...+.++.+ .+.++|++.+++|+.++++++|++.|.|.++++.+++++|..+..+.++..+|++||+
T Consensus        75 ~g~iDilVnnAG~~~~~~~~~-~~~~~~~~~~~vNl~~~~~~~~~~~~~m~~~~~~~i~~~ss~~~~~~~~~~~Y~asKa  153 (242)
T d1ulsa_          75 LGRLDGVVHYAGITRDNFHWK-MPLEDWELVLRVNLTGSFLVAKAASEAMREKNPGSIVLTASRVYLGNLGQANYAASMA  153 (242)
T ss_dssp             HSSCCEEEECCCCCCCCCGGG-CCHHHHHHHHHHHHHHHHHHHHHHHHHHTTTCCEEEEEECCGGGGCCTTCHHHHHHHH
T ss_pred             cCCceEEEECCcccccCchhh-CcchhhhccccccchhhhhhhhhccccccccccceeeeeccccccCCCCCcchHHHHH
Confidence            999999999999988777766 5889999999999999999999999999877654444444466778889999999999


Q ss_pred             HHHHHHHHHHHHhCCC-eEEEEEecCccccCccccccc
Q 044010          203 ALVLFFETLRVELGSD-VGVTIVTPGFIESELTQGKFL  239 (248)
Q Consensus       203 al~~l~~~la~~~~~~-i~v~~v~pg~v~T~~~~~~~~  239 (248)
                      |+++|++++|.|++++ ||||+|+||+++|+|......
T Consensus       154 al~~ltk~lA~ela~~gIrVN~I~PG~v~T~~~~~~~~  191 (242)
T d1ulsa_         154 GVVGLTRTLALELGRWGIRVNTLAPGFIETRMTAKVPE  191 (242)
T ss_dssp             HHHHHHHHHHHHHGGGTEEEEEEEECSBCCTTTSSSCH
T ss_pred             HHHHHHHHHHHHHhhhCcEEEEEeeCcccChhhhcCCH
Confidence            9999999999999985 999999999999999886543

>d1gega_ c.2.1.2 (A:) meso-2,3-butanediol dehydrogenase {Klebsiella pneumoniae [TaxId: 573]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: meso-2,3-butanediol dehydrogenase
species: Klebsiella pneumoniae [TaxId: 573]

Probab=100.00  E-value=6.2e-45  Score=304.10  Aligned_cols=190  Identities=26%  Similarity=0.408  Sum_probs=176.7

Q ss_pred             CCEEEEcCCCChHHHHHHHHHHHcCCeEEEEeCCcchHHHHHHHHHhhCCCcEEEEEccCCCHHHHHHHHHHHHhHcCCc
Q 044010           47 GKVVIITGASSGIGEHLAYEYARRGACLALCARREKSLEEVADTAREIGSPDVITIRADVSKVDDCRSLVEETMNHFGRL  126 (248)
Q Consensus        47 ~k~~lVtGg~~gIG~aia~~l~~~G~~V~l~~r~~~~~~~~~~~l~~~~~~~v~~~~~D~~~~~~~~~~~~~~~~~~g~i  126 (248)
                      +|++|||||++|||+++|++|+++|++|++++|+++++++..+++++.++ ++.+++||++|+++++++++++.+++|++
T Consensus         1 KKValITGas~GIG~aia~~la~~Ga~V~~~~r~~~~l~~~~~~i~~~g~-~~~~~~~Dv~~~~~v~~~~~~~~~~~g~i   79 (255)
T d1gega_           1 KKVALVTGAGQGIGKAIALRLVKDGFAVAIADYNDATAKAVASEINQAGG-HAVAVKVDVSDRDQVFAAVEQARKTLGGF   79 (255)
T ss_dssp             CCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHTTC-CEEEEECCTTSHHHHHHHHHHHHHHTTCC
T ss_pred             CCEEEEcCCccHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHhcCC-cEEEEEeeCCCHHHHHHHHHHHHHHhCCc
Confidence            47899999999999999999999999999999999999999999988765 78999999999999999999999999999


Q ss_pred             cEEEEccccCCcccccccCChHHHHHHHHhhhHHHHHHHHHHhhhhhhc--CCeEEEEcCccccccCCCCccchHHHHHH
Q 044010          127 DHLVNNAGISSVALFEDIVNITDFKQIMNINFWGSVYTTRFAVPHLRYT--KGKIVVLSSAASWLTAPRMSFYNASKAAL  204 (248)
Q Consensus       127 d~vv~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~--~g~iV~isS~~~~~~~~~~~~Y~~sKaal  204 (248)
                      |++|||||.....++.+ .+.++|++.+++|+.|+++++|++.|.|.++  +|+||++||.++..+.+++++|++||+|+
T Consensus        80 DilVnnAG~~~~~~~~~-~~~~~~~~~~~vNl~g~~~~~~~~~~~m~~~~~~g~Iv~isS~~~~~~~~~~~~Y~asKaal  158 (255)
T d1gega_          80 DVIVNNAGVAPSTPIES-ITPEIVDKVYNINVKGVIWGIQAAVEAFKKEGHGGKIINACSQAGHVGNPELAVYSSSKFAV  158 (255)
T ss_dssp             CEEEECCCCCCCBCGGG-CCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTSCEEEEEECCGGGTSCCTTBHHHHHHHHHH
T ss_pred             cEEEecccccccCcHHH-hhhhhhhhhhhhcccchhhhhhhhcchhhhhccccccccccchhhcccCcccccchhCHHHH
Confidence            99999999988777766 5889999999999999999999999986543  37899999999999999999999999999


Q ss_pred             HHHHHHHHHHhCCC-eEEEEEecCccccCcccccc
Q 044010          205 VLFFETLRVELGSD-VGVTIVTPGFIESELTQGKF  238 (248)
Q Consensus       205 ~~l~~~la~~~~~~-i~v~~v~pg~v~T~~~~~~~  238 (248)
                      ++|++++|.|+++. ||||+|+||+++|+|+....
T Consensus       159 ~~ltk~lA~el~~~gIrVN~I~PG~i~T~~~~~~~  193 (255)
T d1gega_         159 RGLTQTAARDLAPLGITVNGYCPGIVKTPMWAEID  193 (255)
T ss_dssp             HHHHHHHHHHHGGGTEEEEEEEECSBSSHHHHHHH
T ss_pred             HhhHHHHHHHhhhhCcEEEEEecCcccChHHhhhh
Confidence            99999999999985 99999999999999977654

>d1yb1a_ c.2.1.2 (A:) 17-beta-hydroxysteroid dehydrogenase type XI {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: 17-beta-hydroxysteroid dehydrogenase type XI
species: Human (Homo sapiens) [TaxId: 9606]

Probab=100.00  E-value=2.2e-45  Score=304.66  Aligned_cols=197  Identities=30%  Similarity=0.443  Sum_probs=181.6

Q ss_pred             ccCCCCCEEEEcCCCChHHHHHHHHHHHcCCeEEEEeCCcchHHHHHHHHHhhCCCcEEEEEccCCCHHHHHHHHHHHHh
Q 044010           42 SEDVSGKVVIITGASSGIGEHLAYEYARRGACLALCARREKSLEEVADTAREIGSPDVITIRADVSKVDDCRSLVEETMN  121 (248)
Q Consensus        42 ~~~~~~k~~lVtGg~~gIG~aia~~l~~~G~~V~l~~r~~~~~~~~~~~l~~~~~~~v~~~~~D~~~~~~~~~~~~~~~~  121 (248)
                      .++++||++|||||++|||+++|++|+++|++|++.+|+.+++++..+++++.+. ++..+.||++|.++++++++++.+
T Consensus         2 ~~~l~Gkv~lITGas~GIG~~ia~~la~~G~~V~l~~r~~~~l~~~~~~~~~~~~-~~~~~~~Dvs~~~~v~~~~~~i~~   80 (244)
T d1yb1a_           2 RKSVTGEIVLITGAGHGIGRLTAYEFAKLKSKLVLWDINKHGLEETAAKCKGLGA-KVHTFVVDCSNREDIYSSAKKVKA   80 (244)
T ss_dssp             CCCCTTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHTTC-CEEEEECCTTCHHHHHHHHHHHHH
T ss_pred             CCCCCCCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHhcCC-cEEEEEeeCCCHHHHHHHHHHHHH
Confidence            3589999999999999999999999999999999999999999999999987765 899999999999999999999999


Q ss_pred             HcCCccEEEEccccCCcccccccCChHHHHHHHHhhhHHHHHHHHHHhhhhhhcC-CeEEEEcCccccccCCCCccchHH
Q 044010          122 HFGRLDHLVNNAGISSVALFEDIVNITDFKQIMNINFWGSVYTTRFAVPHLRYTK-GKIVVLSSAASWLTAPRMSFYNAS  200 (248)
Q Consensus       122 ~~g~id~vv~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~-g~iV~isS~~~~~~~~~~~~Y~~s  200 (248)
                      ++|++|++|||||........+ .+.++|++++++|+.|+++++++++|.|.+++ |+||++||.++..+.+++++|++|
T Consensus        81 ~~g~idilinnag~~~~~~~~~-~~~~~~~~~~~vN~~g~~~l~~~~lp~m~~~~~G~Iv~isS~~~~~~~~~~~~Y~as  159 (244)
T d1yb1a_          81 EIGDVSILVNNAGVVYTSDLFA-TQDPQIEKTFEVNVLAHFWTTKAFLPAMTKNNHGHIVTVASAAGHVSVPFLLAYCSS  159 (244)
T ss_dssp             HTCCCSEEEECCCCCCCCCCGG-GHHHHHHHHHHHHTHHHHHHHHHHHHHHHHTTCEEEEEECCCC-CCCHHHHHHHHHH
T ss_pred             HcCCCceeEeeccccccccccc-cchhHHHhhcceeeeccHHHHHHHhhhHHhcCCceEEEeecchhcCCCCCcHHHHHH
Confidence            9999999999999988777766 57799999999999999999999999997665 899999999999999999999999


Q ss_pred             HHHHHHHHHHHHHHhCC----CeEEEEEecCccccCcccccccc
Q 044010          201 KAALVLFFETLRVELGS----DVGVTIVTPGFIESELTQGKFLT  240 (248)
Q Consensus       201 Kaal~~l~~~la~~~~~----~i~v~~v~pg~v~T~~~~~~~~~  240 (248)
                      |+|+.+|+++|+.|+++    +|+||+|+||+|+|+|.++...+
T Consensus       160 Kaal~~~~~~La~El~~~~~~gI~V~~i~PG~v~T~~~~~~~~~  203 (244)
T d1yb1a_         160 KFAAVGFHKTLTDELAALQITGVKTTCLCPNFVNTGFIKNPSTS  203 (244)
T ss_dssp             HHHHHHHHHHHHHHHHHTTCTTEEEEEEEETHHHHCSTTCTHHH
T ss_pred             HHHHHHHHHHHHHHHHhhcCCCEEEEEEEcCCCCChhhhCcCcc
Confidence            99999999999999843    49999999999999998765443

>d2d1ya1 c.2.1.2 (A:2-249) Hypothetical protein TTHA0369 {Thermus thermophilus [TaxId: 274]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Hypothetical protein TTHA0369
species: Thermus thermophilus [TaxId: 274]

Probab=100.00  E-value=1.1e-44  Score=301.17  Aligned_cols=187  Identities=30%  Similarity=0.457  Sum_probs=170.0

Q ss_pred             CCCCCEEEEcCCCChHHHHHHHHHHHcCCeEEEEeCCcchHHHHHHHHHhhCCCcEEEEEccCCCHHHHHHHHHHHHhHc
Q 044010           44 DVSGKVVIITGASSGIGEHLAYEYARRGACLALCARREKSLEEVADTAREIGSPDVITIRADVSKVDDCRSLVEETMNHF  123 (248)
Q Consensus        44 ~~~~k~~lVtGg~~gIG~aia~~l~~~G~~V~l~~r~~~~~~~~~~~l~~~~~~~v~~~~~D~~~~~~~~~~~~~~~~~~  123 (248)
                      .++||++|||||++|||+++|++|+++|++|++++|+++..+ ..+++      ...++++|++|+++++++++++.+++
T Consensus         2 ~l~GK~alITGas~GIG~aia~~la~~G~~V~~~~~~~~~~~-~~~~~------~~~~~~~Dv~~~~~v~~~~~~~~~~~   74 (248)
T d2d1ya1           2 LFAGKGVLVTGGARGIGRAIAQAFAREGALVALCDLRPEGKE-VAEAI------GGAFFQVDLEDERERVRFVEEAAYAL   74 (248)
T ss_dssp             TTTTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESSTTHHH-HHHHH------TCEEEECCTTCHHHHHHHHHHHHHHH
T ss_pred             ccCCCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEECCHHHHH-HHHHc------CCeEEEEeCCCHHHHHHHHHHHHHhc
Confidence            479999999999999999999999999999999999976533 33333      23568999999999999999999999


Q ss_pred             CCccEEEEccccCCcccccccCChHHHHHHHHhhhHHHHHHHHHHhhhhhhcC-CeEEEEcCccccccCCCCccchHHHH
Q 044010          124 GRLDHLVNNAGISSVALFEDIVNITDFKQIMNINFWGSVYTTRFAVPHLRYTK-GKIVVLSSAASWLTAPRMSFYNASKA  202 (248)
Q Consensus       124 g~id~vv~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~-g~iV~isS~~~~~~~~~~~~Y~~sKa  202 (248)
                      |++|++|||||...+.++.+ .+.++|++.+++|+.++++++|++.|.|++++ |+||++||..+..+.++..+|++||+
T Consensus        75 G~iDiLVnnAG~~~~~~~~~-~~~e~~~~~~~vNl~g~~~~~~~~~p~m~~~~~G~Ii~isS~~~~~~~~~~~~Y~asKa  153 (248)
T d2d1ya1          75 GRVDVLVNNAAIAAPGSALT-VRLPEWRRVLEVNLTAPMHLSALAAREMRKVGGGAIVNVASVQGLFAEQENAAYNASKG  153 (248)
T ss_dssp             SCCCEEEECCCCCCCBCTTT-CCHHHHHHHHHHHTHHHHHHHHHHHHHHHTTTCEEEEEECCGGGTSBCTTBHHHHHHHH
T ss_pred             CCCCeEEEeCcCCCCCChhh-CCHHHHHHHHHhhhhhHhhhhhhhcccccccccccccccccccccccccccchhHHHHH
Confidence            99999999999988877776 58899999999999999999999999998655 89999999999999999999999999


Q ss_pred             HHHHHHHHHHHHhCCC-eEEEEEecCccccCcccccc
Q 044010          203 ALVLFFETLRVELGSD-VGVTIVTPGFIESELTQGKF  238 (248)
Q Consensus       203 al~~l~~~la~~~~~~-i~v~~v~pg~v~T~~~~~~~  238 (248)
                      |+++|++++|+|++++ ||||+|+||+++|+|.....
T Consensus       154 al~~ltk~lA~el~~~gIrVN~I~PG~v~T~~~~~~~  190 (248)
T d2d1ya1         154 GLVNLTRSLALDLAPLRIRVNAVAPGAIATEAVLEAI  190 (248)
T ss_dssp             HHHHHHHHHHHHHGGGTEEEEEEEECSBCCHHHHHHH
T ss_pred             HHHHHHHHHHHHhhhhCcEEEEEeeCCCCCchHHHHh
Confidence            9999999999999985 99999999999999876543

>d1hxha_ c.2.1.2 (A:) 3beta/17beta hydroxysteroid dehydrogenase {Comamonas testosteroni [TaxId: 285]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: 3beta/17beta hydroxysteroid dehydrogenase
species: Comamonas testosteroni [TaxId: 285]

Probab=100.00  E-value=5.9e-45  Score=303.77  Aligned_cols=192  Identities=26%  Similarity=0.363  Sum_probs=177.3

Q ss_pred             CCCCCEEEEcCCCChHHHHHHHHHHHcCCeEEEEeCCcchHHHHHHHHHhhCCCcEEEEEccCCCHHHHHHHHHHHHhHc
Q 044010           44 DVSGKVVIITGASSGIGEHLAYEYARRGACLALCARREKSLEEVADTAREIGSPDVITIRADVSKVDDCRSLVEETMNHF  123 (248)
Q Consensus        44 ~~~~k~~lVtGg~~gIG~aia~~l~~~G~~V~l~~r~~~~~~~~~~~l~~~~~~~v~~~~~D~~~~~~~~~~~~~~~~~~  123 (248)
                      +++||++|||||++|||+++|++|+++|++|++++|+++++++..+++.    .+..++.+|++|+++++++++++.+++
T Consensus         3 rL~gK~alITGas~GIG~aia~~la~~Ga~V~~~~~~~~~~~~~~~~~~----~~~~~~~~Dv~~~~~~~~~~~~~~~~~   78 (253)
T d1hxha_           3 RLQGKVALVTGGASGVGLEVVKLLLGEGAKVAFSDINEAAGQQLAAELG----ERSMFVRHDVSSEADWTLVMAAVQRRL   78 (253)
T ss_dssp             TTTTCEEEETTTTSHHHHHHHHHHHHTTCEEEEECSCHHHHHHHHHHHC----TTEEEECCCTTCHHHHHHHHHHHHHHH
T ss_pred             CCCCCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHhC----CCeEEEEeecCCHHHHHHHHHHHHHHh
Confidence            6899999999999999999999999999999999999988888777662    367889999999999999999999999


Q ss_pred             CCccEEEEccccCCcccccccCChHHHHHHHHhhhHHHHHHHHHHhhhhhhcCCeEEEEcCccccccCCCCccchHHHHH
Q 044010          124 GRLDHLVNNAGISSVALFEDIVNITDFKQIMNINFWGSVYTTRFAVPHLRYTKGKIVVLSSAASWLTAPRMSFYNASKAA  203 (248)
Q Consensus       124 g~id~vv~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~g~iV~isS~~~~~~~~~~~~Y~~sKaa  203 (248)
                      |++|++|||||...+.++.+ .+.++|++.+++|+.++++++|++.|.|++++|+||++||..+..+.+..++|++||+|
T Consensus        79 g~iDilVnnAG~~~~~~~~~-~~~~~~~~~~~vNl~~~~~~~~~~~~~m~~~~G~Iv~isS~~~~~~~~~~~~Y~asKaa  157 (253)
T d1hxha_          79 GTLNVLVNNAGILLPGDMET-GRLEDFSRLLKINTESVFIGCQQGIAAMKETGGSIINMASVSSWLPIEQYAGYSASKAA  157 (253)
T ss_dssp             CSCCEEEECCCCCCCBCTTT-CCHHHHHHHHHHHTHHHHHHHHHHHHHHTTTCEEEEEECCGGGTSCCTTBHHHHHHHHH
T ss_pred             CCCCeEEecccccCCCCccc-CCHHHHHHHHHHhhhHHHHHHHHHHHHHHhcCCceecccchhhhcCccccccccchhHH
Confidence            99999999999988777666 58899999999999999999999999998778999999999999999999999999999


Q ss_pred             HHHHHHHHHHHhCC---CeEEEEEecCccccCcccccccc
Q 044010          204 LVLFFETLRVELGS---DVGVTIVTPGFIESELTQGKFLT  240 (248)
Q Consensus       204 l~~l~~~la~~~~~---~i~v~~v~pg~v~T~~~~~~~~~  240 (248)
                      +.+|++++|.|+++   +||||+|+||+++|+|.+..+.+
T Consensus       158 l~~lt~~lA~e~~~~g~~IrVN~I~PG~i~T~~~~~~~~~  197 (253)
T d1hxha_         158 VSALTRAAALSCRKQGYAIRVNSIHPDGIYTPMMQASLPK  197 (253)
T ss_dssp             HHHHHHHHHHHHHHHTCCEEEEEEEESEECCHHHHHHSCT
T ss_pred             HHHHHHHHHHHHhhcCCCEEEEEEeECCCcCHhHHhhCcc
Confidence            99999999999964   49999999999999998765443

>d1edoa_ c.2.1.2 (A:) beta-keto acyl carrier protein reductase {Oil seed rape (Brassica napus) [TaxId: 3708]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: beta-keto acyl carrier protein reductase
species: Oil seed rape (Brassica napus) [TaxId: 3708]

Probab=100.00  E-value=1.2e-44  Score=300.49  Aligned_cols=190  Identities=30%  Similarity=0.465  Sum_probs=175.1

Q ss_pred             CEEEEcCCCChHHHHHHHHHHHcCCeEEEEe-CCcchHHHHHHHHHhhCCCcEEEEEccCCCHHHHHHHHHHHHhHcCCc
Q 044010           48 KVVIITGASSGIGEHLAYEYARRGACLALCA-RREKSLEEVADTAREIGSPDVITIRADVSKVDDCRSLVEETMNHFGRL  126 (248)
Q Consensus        48 k~~lVtGg~~gIG~aia~~l~~~G~~V~l~~-r~~~~~~~~~~~l~~~~~~~v~~~~~D~~~~~~~~~~~~~~~~~~g~i  126 (248)
                      +++|||||++|||+++|++|+++|++|++.+ |+++.+++..+++++.+. ++.++++|++|+++++++++++.+++|++
T Consensus         2 pV~lITGas~GIG~a~a~~la~~Ga~V~i~~~~~~~~~~~~~~~~~~~g~-~~~~~~~Dv~~~~~v~~~~~~~~~~~g~i   80 (244)
T d1edoa_           2 PVVVVTGASRGIGKAIALSLGKAGCKVLVNYARSAKAAEEVSKQIEAYGG-QAITFGGDVSKEADVEAMMKTAIDAWGTI   80 (244)
T ss_dssp             CEEEETTCSSHHHHHHHHHHHHTTCEEEEEESSCHHHHHHHHHHHHHHTC-EEEEEECCTTSHHHHHHHHHHHHHHSSCC
T ss_pred             CEEEEeCCCcHHHHHHHHHHHHCCCEEEEEeCCCHHHHHHHHHHHHHcCC-cEEEEeCCCCCHHHHHHHHHHHHHHcCCC
Confidence            5899999999999999999999999999875 566778888888887765 88999999999999999999999999999


Q ss_pred             cEEEEccccCCcccccccCChHHHHHHHHhhhHHHHHHHHHHhhhhhhc-CCeEEEEcCccccccCCCCccchHHHHHHH
Q 044010          127 DHLVNNAGISSVALFEDIVNITDFKQIMNINFWGSVYTTRFAVPHLRYT-KGKIVVLSSAASWLTAPRMSFYNASKAALV  205 (248)
Q Consensus       127 d~vv~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~-~g~iV~isS~~~~~~~~~~~~Y~~sKaal~  205 (248)
                      |++|||||.....++.+ .+.++|++.+++|+.++++++|++.|.|+++ +|+||++||.++..+.++.++|++||+|+.
T Consensus        81 DiLVnnAg~~~~~~~~~-~~~~~~~~~~~vNl~~~~~~~~~~~~~m~~~~~G~IVnisS~~~~~~~~~~~~Y~asKaal~  159 (244)
T d1edoa_          81 DVVVNNAGITRDTLLIR-MKKSQWDEVIDLNLTGVFLCTQAATKIMMKKRKGRIINIASVVGLIGNIGQANYAAAKAGVI  159 (244)
T ss_dssp             SEEEECCCCCCCCCGGG-CCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEEECCTHHHHCCTTCHHHHHHHHHHH
T ss_pred             Cccccccccccccchhc-cchHHHHHHHhhhhhhHHHHHHHHHHHHHHcCCcEEEEEcChhhcCCCCCCHHHHHHHHHHH
Confidence            99999999988777766 5889999999999999999999999998754 599999999999999999999999999999


Q ss_pred             HHHHHHHHHhCCC-eEEEEEecCccccCccccccc
Q 044010          206 LFFETLRVELGSD-VGVTIVTPGFIESELTQGKFL  239 (248)
Q Consensus       206 ~l~~~la~~~~~~-i~v~~v~pg~v~T~~~~~~~~  239 (248)
                      +|++++|.|++++ ||||+|+||+++|+|.+....
T Consensus       160 ~ltk~lA~el~~~gIrvN~I~PG~i~T~~~~~~~~  194 (244)
T d1edoa_         160 GFSKTAAREGASRNINVNVVCPGFIASDMTAKLGE  194 (244)
T ss_dssp             HHHHHHHHHHHTTTEEEEEEEECSBCSHHHHTTCH
T ss_pred             HChHHHHHHHhhhCcEEEEEecceeccHHHHHhhH
Confidence            9999999999885 999999999999999887543

>d1spxa_ c.2.1.2 (A:) Glucose dehydrogenase (5l265) {Nematode (Caenorhabditis elegans) [TaxId: 6239]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Glucose dehydrogenase (5l265)
species: Nematode (Caenorhabditis elegans) [TaxId: 6239]

Probab=100.00  E-value=3.6e-44  Score=300.92  Aligned_cols=197  Identities=31%  Similarity=0.475  Sum_probs=168.8

Q ss_pred             CCCCCEEEEcCCCChHHHHHHHHHHHcCCeEEEEeCCcchHHHHHHHHHhhCC--CcEEEEEccCCCHHHHHHHHHHHHh
Q 044010           44 DVSGKVVIITGASSGIGEHLAYEYARRGACLALCARREKSLEEVADTAREIGS--PDVITIRADVSKVDDCRSLVEETMN  121 (248)
Q Consensus        44 ~~~~k~~lVtGg~~gIG~aia~~l~~~G~~V~l~~r~~~~~~~~~~~l~~~~~--~~v~~~~~D~~~~~~~~~~~~~~~~  121 (248)
                      +++||++|||||++|||+++|++|+++|++|++++|+.+++++..+++++.+.  .++.++.+|++++++++++++++.+
T Consensus         2 rl~gKvalVTGas~GIG~aia~~la~~Ga~V~~~~r~~~~l~~~~~~l~~~~~~~~~~~~~~~Dvt~~~~v~~~~~~~~~   81 (264)
T d1spxa_           2 RFAEKVAIITGSSNGIGRATAVLFAREGAKVTITGRHAERLEETRQQILAAGVSEQNVNSVVADVTTDAGQDEILSTTLG   81 (264)
T ss_dssp             TTTTCEEEETTTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHTTCCGGGEEEEECCTTSHHHHHHHHHHHHH
T ss_pred             CCCCCEEEEeCcCCHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHhcCCCcCceEEEEccCCCHHHHHHHHHHHHH
Confidence            68999999999999999999999999999999999999999999999987653  3689999999999999999999999


Q ss_pred             HcCCccEEEEccccCCcccc---cccCChHHHHHHHHhhhHHHHHHHHHHhhhhhhcCCeEEEEcCcc-ccccCCCCccc
Q 044010          122 HFGRLDHLVNNAGISSVALF---EDIVNITDFKQIMNINFWGSVYTTRFAVPHLRYTKGKIVVLSSAA-SWLTAPRMSFY  197 (248)
Q Consensus       122 ~~g~id~vv~~ag~~~~~~~---~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~g~iV~isS~~-~~~~~~~~~~Y  197 (248)
                      ++|++|++|||||...+...   ....+.++|++.+++|+.+++.++|++.|.|++++|++|+++|.. +..+.++.++|
T Consensus        82 ~~g~iDilvnnAG~~~~~~~~~~~~~~~~e~~~~~~~vNl~~~~~~~~~~~p~m~~~~g~iI~~~S~~~~~~~~~~~~~Y  161 (264)
T d1spxa_          82 KFGKLDILVNNAGAAIPDSQSKTGTAQSIESYDATLNLNLRSVIALTKKAVPHLSSTKGEIVNISSIASGLHATPDFPYY  161 (264)
T ss_dssp             HHSCCCEEEECCC-------------CCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEECCTTSSSSCCTTSHHH
T ss_pred             HhCCCCEeecccccccCCccccccccCCHHHHHHHHHHhHHHHHHHHhhhCCccccccCcceeeeeeccccccCCCchhh
Confidence            99999999999998654322   222467999999999999999999999999988888888887765 57788999999


Q ss_pred             hHHHHHHHHHHHHHHHHhCCC-eEEEEEecCccccCcccccccc
Q 044010          198 NASKAALVLFFETLRVELGSD-VGVTIVTPGFIESELTQGKFLT  240 (248)
Q Consensus       198 ~~sKaal~~l~~~la~~~~~~-i~v~~v~pg~v~T~~~~~~~~~  240 (248)
                      ++||+|+++|+++||.|+++. ||||+|+||+|+|+|.+....+
T Consensus       162 ~asKaal~~lt~~lA~el~~~gIrVN~V~PG~v~T~~~~~~~~~  205 (264)
T d1spxa_         162 SIAKAAIDQYTRNTAIDLIQHGIRVNSISPGLVATGFGSAMGMP  205 (264)
T ss_dssp             HHHHHHHHHHHHHHHHHHGGGTCEEEEEEECCBCCCC-------
T ss_pred             hhhhhhHHHHHHHHHHHhcccCeEEEEEeeCCCCCcchhccCCc
Confidence            999999999999999999985 9999999999999998766443

>d1xkqa_ c.2.1.2 (A:) Hypothetical protein R05D8.7 {Caenorhabditis elegans [TaxId: 6239]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Hypothetical protein R05D8.7
species: Caenorhabditis elegans [TaxId: 6239]

Probab=100.00  E-value=3.7e-44  Score=302.05  Aligned_cols=196  Identities=32%  Similarity=0.474  Sum_probs=177.0

Q ss_pred             CCCCCEEEEcCCCChHHHHHHHHHHHcCCeEEEEeCCcchHHHHHHHHHhhCC--CcEEEEEccCCCHHHHHHHHHHHHh
Q 044010           44 DVSGKVVIITGASSGIGEHLAYEYARRGACLALCARREKSLEEVADTAREIGS--PDVITIRADVSKVDDCRSLVEETMN  121 (248)
Q Consensus        44 ~~~~k~~lVtGg~~gIG~aia~~l~~~G~~V~l~~r~~~~~~~~~~~l~~~~~--~~v~~~~~D~~~~~~~~~~~~~~~~  121 (248)
                      +++||++|||||++|||+++|++|+++|++|++++|+++++++..+++++.+.  .++..++||++|+++++++++++.+
T Consensus         2 rL~gK~alVTGas~GIG~aia~~la~~Ga~V~l~~r~~~~l~~~~~~l~~~~~~~~~~~~~~~Dvs~~~~v~~~~~~~~~   81 (272)
T d1xkqa_           2 RFSNKTVIITGSSNGIGRTTAILFAQEGANVTITGRSSERLEETRQIILKSGVSEKQVNSVVADVTTEDGQDQIINSTLK   81 (272)
T ss_dssp             TTTTCEEEETTCSSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHTTTCCGGGEEEEECCTTSHHHHHHHHHHHHH
T ss_pred             CCCCCEEEEeCcCcHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHhcCCCCCceEEEEccCCCHHHHHHHHHHHHH
Confidence            68999999999999999999999999999999999999999999999987642  4689999999999999999999999


Q ss_pred             HcCCccEEEEccccCCccccc---ccCChHHHHHHHHhhhHHHHHHHHHHhhhhhhcCCeEEEEcC-ccccccCCCCccc
Q 044010          122 HFGRLDHLVNNAGISSVALFE---DIVNITDFKQIMNINFWGSVYTTRFAVPHLRYTKGKIVVLSS-AASWLTAPRMSFY  197 (248)
Q Consensus       122 ~~g~id~vv~~ag~~~~~~~~---~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~g~iV~isS-~~~~~~~~~~~~Y  197 (248)
                      ++|++|++|||||...+.++.   .+.+.++|++.+++|+.+++.++|++.|.|++++|++|+++| .++..+.+++.+|
T Consensus        82 ~~g~iDilvnnAG~~~~~~~~~~~~d~~~~~~~~~~~vNl~~~~~~~~~~~p~m~~~~g~iI~~~Ss~a~~~~~~~~~~Y  161 (272)
T d1xkqa_          82 QFGKIDVLVNNAGAAIPDAFGTTGTDQGIDIYHKTLKLNLQAVIEMTKKVKPHLVASKGEIVNVSSIVAGPQAQPDFLYY  161 (272)
T ss_dssp             HHSCCCEEEECCCCCCCCTTCCCGGGSCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEECCGGGSSSCCCSSHHH
T ss_pred             HhCCceEEEeCCcccCcccccccchhccHHHHHHHHHhhhhHHHHHHHhhcccccccCCccccccchhccccCCCCcchh
Confidence            999999999999987665442   224667899999999999999999999999877777777766 4678899999999


Q ss_pred             hHHHHHHHHHHHHHHHHhCCC-eEEEEEecCccccCccccccc
Q 044010          198 NASKAALVLFFETLRVELGSD-VGVTIVTPGFIESELTQGKFL  239 (248)
Q Consensus       198 ~~sKaal~~l~~~la~~~~~~-i~v~~v~pg~v~T~~~~~~~~  239 (248)
                      ++||+|+++|++++|.|++++ ||||+|+||+|+|+|.+....
T Consensus       162 ~asKaal~~ltk~lA~el~~~gIrVN~I~PG~i~T~~~~~~~~  204 (272)
T d1xkqa_         162 AIAKAALDQYTRSTAIDLAKFGIRVNSVSPGMVETGFTNAMGM  204 (272)
T ss_dssp             HHHHHHHHHHHHHHHHHHHTTTCEEEEEEECCBCSSHHHHTTC
T ss_pred             hhHHHHHHHHHHHHHHHhcccCeEEEEEeeCCCcchhhhccCC
Confidence            999999999999999999885 999999999999999876543

>d1bdba_ c.2.1.2 (A:) Cis-biphenyl-2,3-dihydrodiol-2,3-dehydrogenase {Pseudomonas sp., lb400 [TaxId: 306]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Cis-biphenyl-2,3-dihydrodiol-2,3-dehydrogenase
species: Pseudomonas sp., lb400 [TaxId: 306]

Probab=100.00  E-value=8.9e-44  Score=300.26  Aligned_cols=192  Identities=27%  Similarity=0.402  Sum_probs=172.2

Q ss_pred             cCCCCCEEEEcCCCChHHHHHHHHHHHcCCeEEEEeCCcchHHHHHHHHHhhCCCcEEEEEccCCCHHHHHHHHHHHHhH
Q 044010           43 EDVSGKVVIITGASSGIGEHLAYEYARRGACLALCARREKSLEEVADTAREIGSPDVITIRADVSKVDDCRSLVEETMNH  122 (248)
Q Consensus        43 ~~~~~k~~lVtGg~~gIG~aia~~l~~~G~~V~l~~r~~~~~~~~~~~l~~~~~~~v~~~~~D~~~~~~~~~~~~~~~~~  122 (248)
                      |+++||++|||||++|||+++|++|+++|++|++++|+++++++..+++.    .++..+.+|+++.++++++++++.++
T Consensus         1 M~L~gK~alITGas~GIG~aia~~la~~Ga~V~i~~r~~~~l~~~~~~~~----~~~~~~~~Dv~~~~~~~~~~~~~~~~   76 (276)
T d1bdba_           1 MKLKGEAVLITGGASGLGRALVDRFVAEGAKVAVLDKSAERLAELETDHG----DNVLGIVGDVRSLEDQKQAASRCVAR   76 (276)
T ss_dssp             CTTTTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHG----GGEEEEECCTTCHHHHHHHHHHHHHH
T ss_pred             CCCCCCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHcC----CCeeEEecccccHHHHHHHHHHHHHH
Confidence            57899999999999999999999999999999999999887776665542    37899999999999999999999999


Q ss_pred             cCCccEEEEccccCCccccc----ccCChHHHHHHHHhhhHHHHHHHHHHhhhhhhcCCeEEEEcCccccccCCCCccch
Q 044010          123 FGRLDHLVNNAGISSVALFE----DIVNITDFKQIMNINFWGSVYTTRFAVPHLRYTKGKIVVLSSAASWLTAPRMSFYN  198 (248)
Q Consensus       123 ~g~id~vv~~ag~~~~~~~~----~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~g~iV~isS~~~~~~~~~~~~Y~  198 (248)
                      +|++|++|||||........    .+.+.++|++++++|+.++++++|++.|.|++++|++|+++|..+..+.++.++|+
T Consensus        77 ~g~idilvnnAG~~~~~~~~~~~~~e~~~~~~~~~~~vNl~g~~~~~~~~~p~m~~~~g~iI~i~S~~~~~~~~~~~~Y~  156 (276)
T d1bdba_          77 FGKIDTLIPNAGIWDYSTALVDLPEESLDAAFDEVFHINVKGYIHAVKACLPALVASRGNVIFTISNAGFYPNGGGPLYT  156 (276)
T ss_dssp             HSCCCEEECCCCCCCTTCCGGGSCTTTHHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEECCGGGTSTTSSCHHHH
T ss_pred             hCCcccccccccccCCCCccccccccchhhhhhHHHHHhhHHHHHHHHHHHHHHHhcCCCceeeeechhccCCCCCchHH
Confidence            99999999999976543321    11234579999999999999999999999988889999999999999999999999


Q ss_pred             HHHHHHHHHHHHHHHHhCCCeEEEEEecCccccCcccccc
Q 044010          199 ASKAALVLFFETLRVELGSDVGVTIVTPGFIESELTQGKF  238 (248)
Q Consensus       199 ~sKaal~~l~~~la~~~~~~i~v~~v~pg~v~T~~~~~~~  238 (248)
                      +||+|+++|++++|.|++++||||+|+||+|+|+|.....
T Consensus       157 asKaal~~ltr~lA~ela~~IrVN~I~PG~i~T~~~~~~~  196 (276)
T d1bdba_         157 AAKHAIVGLVRELAFELAPYVRVNGVGSGGINSDLRGPSS  196 (276)
T ss_dssp             HHHHHHHHHHHHHHHHHTTTCEEEEEEECCCCSCCCCCGG
T ss_pred             HHHHHHHHHHHHHHHHhhcceEEcccCCCCEecCcCCccc
Confidence            9999999999999999998899999999999999976543

>d2bgka1 c.2.1.2 (A:11-278) Rhizome secoisolariciresinol dehydrogenase {Mayapple (Podophyllum peltatum) [TaxId: 35933]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Rhizome secoisolariciresinol dehydrogenase
species: Mayapple (Podophyllum peltatum) [TaxId: 35933]

Probab=100.00  E-value=8.5e-44  Score=299.23  Aligned_cols=194  Identities=29%  Similarity=0.422  Sum_probs=174.6

Q ss_pred             CCCCCEEEEcCCCChHHHHHHHHHHHcCCeEEEEeCCcchHHHHHHHHHhhCCCcEEEEEccCCCHHHHHHHHHHHHhHc
Q 044010           44 DVSGKVVIITGASSGIGEHLAYEYARRGACLALCARREKSLEEVADTAREIGSPDVITIRADVSKVDDCRSLVEETMNHF  123 (248)
Q Consensus        44 ~~~~k~~lVtGg~~gIG~aia~~l~~~G~~V~l~~r~~~~~~~~~~~l~~~~~~~v~~~~~D~~~~~~~~~~~~~~~~~~  123 (248)
                      +++||++|||||++|||+++|++|+++|++|++++|+++++++..+++...+  .+.++.||++|+++++++++++.+++
T Consensus         3 rL~gKvalITGas~GIG~aia~~la~~Ga~V~i~~r~~~~~~~~~~~l~~~~--~~~~~~~Dv~~~~~v~~~~~~~~~~~   80 (268)
T d2bgka1           3 RLQDKVAIITGGAGGIGETTAKLFVRYGAKVVIADIADDHGQKVCNNIGSPD--VISFVHCDVTKDEDVRNLVDTTIAKH   80 (268)
T ss_dssp             TTTTCEEEEESTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHCCTT--TEEEEECCTTCHHHHHHHHHHHHHHH
T ss_pred             CCCCCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHhcCCC--ceEEEEccCCCHHHHHHHHHHHHHHc
Confidence            7999999999999999999999999999999999999999999988886543  57889999999999999999999999


Q ss_pred             CCccEEEEccccCCccc-ccccCChHHHHHHHHhhhHHHHHHHHHHhhhhhhcC-CeEEEEcCccccccCCCC-ccchHH
Q 044010          124 GRLDHLVNNAGISSVAL-FEDIVNITDFKQIMNINFWGSVYTTRFAVPHLRYTK-GKIVVLSSAASWLTAPRM-SFYNAS  200 (248)
Q Consensus       124 g~id~vv~~ag~~~~~~-~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~-g~iV~isS~~~~~~~~~~-~~Y~~s  200 (248)
                      |++|++|||||.....+ ...+.+.++|++.+++|+.++++++|++.|.|.+++ |+||++||..+..+.++. ..|++|
T Consensus        81 g~iD~lVnnAG~~~~~~~~~~~~~~~~~~~~~~vNl~g~~~~~~~~~~~m~~~~~g~ii~iss~~~~~~~~~~~~~Y~as  160 (268)
T d2bgka1          81 GKLDIMFGNVGVLSTTPYSILEAGNEDFKRVMDINVYGAFLVAKHAARVMIPAKKGSIVFTASISSFTAGEGVSHVYTAT  160 (268)
T ss_dssp             SCCCEEEECCCCCCSSCSSTTTCCHHHHHHHHHHHTHHHHHHHHHHHHHHGGGTCEEEEEECCGGGTCCCTTSCHHHHHH
T ss_pred             CCcceeccccccccCCCcccccCcHHHHHHHHHHhhcchhhhhhhhcchHhhcCCCCccccccccccccccccccccchh
Confidence            99999999999875443 233467899999999999999999999999987554 899999999998876655 489999


Q ss_pred             HHHHHHHHHHHHHHhCCC-eEEEEEecCccccCccccccc
Q 044010          201 KAALVLFFETLRVELGSD-VGVTIVTPGFIESELTQGKFL  239 (248)
Q Consensus       201 Kaal~~l~~~la~~~~~~-i~v~~v~pg~v~T~~~~~~~~  239 (248)
                      |+|+++|++++|.|+++. ||||+|+||+++|+|..+.+.
T Consensus       161 Kaal~~lt~~lA~el~~~gIrVN~I~PG~i~T~~~~~~~~  200 (268)
T d2bgka1         161 KHAVLGLTTSLCTELGEYGIRVNCVSPYIVASPLLTDVFG  200 (268)
T ss_dssp             HHHHHHHHHHHHHHHGGGTEEEEEEEESCCSCCCCTTSSS
T ss_pred             HHHHHhCHHHHHHHhChhCeEEEecCCCCccChHHhhhhc
Confidence            999999999999999985 999999999999999877654

>d1ae1a_ c.2.1.2 (A:) Tropinone reductase {Jimsonweed (Datura stramonium), I [TaxId: 4076]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Tropinone reductase
species: Jimsonweed (Datura stramonium), I [TaxId: 4076]

Probab=100.00  E-value=1.8e-43  Score=295.56  Aligned_cols=195  Identities=32%  Similarity=0.473  Sum_probs=174.3

Q ss_pred             CCCCCEEEEcCCCChHHHHHHHHHHHcCCeEEEEeCCcchHHHHHHHHHhhCCCcEEEEEccCCCHHHHHHHHHHHHhHc
Q 044010           44 DVSGKVVIITGASSGIGEHLAYEYARRGACLALCARREKSLEEVADTAREIGSPDVITIRADVSKVDDCRSLVEETMNHF  123 (248)
Q Consensus        44 ~~~~k~~lVtGg~~gIG~aia~~l~~~G~~V~l~~r~~~~~~~~~~~l~~~~~~~v~~~~~D~~~~~~~~~~~~~~~~~~  123 (248)
                      +++||++|||||++|||+++|++|+++|++|++++|++++++++.+++++.+. .+.++.+|++++++++++++++.+++
T Consensus         3 ~L~gK~alITGas~GIG~aia~~la~~G~~V~i~~r~~~~l~~~~~~~~~~~~-~~~~~~~D~s~~~~~~~~~~~~~~~~   81 (258)
T d1ae1a_           3 SLKGTTALVTGGSKGIGYAIVEELAGLGARVYTCSRNEKELDECLEIWREKGL-NVEGSVCDLLSRTERDKLMQTVAHVF   81 (258)
T ss_dssp             CCTTCEEEEESCSSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHTTC-CEEEEECCTTCHHHHHHHHHHHHHHT
T ss_pred             CCCCCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHhcCC-CceEEEeecCCHHHHHHHHHHHHHHh
Confidence            68999999999999999999999999999999999999999999999987775 78899999999999999999999998


Q ss_pred             -CCccEEEEccccCCcccccccCChHHHHHHHHhhhHHHHHHHHHHhhhhhhc-CCeEEEEcCccccccCCCCccchHHH
Q 044010          124 -GRLDHLVNNAGISSVALFEDIVNITDFKQIMNINFWGSVYTTRFAVPHLRYT-KGKIVVLSSAASWLTAPRMSFYNASK  201 (248)
Q Consensus       124 -g~id~vv~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~-~g~iV~isS~~~~~~~~~~~~Y~~sK  201 (248)
                       |.+|++|||||.....++.+ .+.++|++++++|+.+++.+.+++.|.|.++ +|+||++||..+..+.+.+.+|+++|
T Consensus        82 ~g~idilinnag~~~~~~~~~-~~~~~~~~~~~~nl~~~~~~~~~~~~~m~~~~~g~ii~isS~~~~~~~~~~~~Y~~sK  160 (258)
T d1ae1a_          82 DGKLNILVNNAGVVIHKEAKD-FTEKDYNIIMGTNFEAAYHLSQIAYPLLKASQNGNVIFLSSIAGFSALPSVSLYSASK  160 (258)
T ss_dssp             TSCCCEEEECCCCCCCCCTTT-CCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTSEEEEEECCGGGTSCCTTCHHHHHHH
T ss_pred             CCCcEEEeccccccccCcccc-CCHHHHhhhhhhccccccccccccccccccccccccccccccccccccccchhHHHHH
Confidence             68999999999988777766 5889999999999999999999999998754 49999999999999999999999999


Q ss_pred             HHHHHHHHHHHHHhCCC-eEEEEEecCccccCcccccccc
Q 044010          202 AALVLFFETLRVELGSD-VGVTIVTPGFIESELTQGKFLT  240 (248)
Q Consensus       202 aal~~l~~~la~~~~~~-i~v~~v~pg~v~T~~~~~~~~~  240 (248)
                      +|+++|++.+|+|++++ ||||+|+||+++|||.+..+..
T Consensus       161 ~al~~lt~~lA~el~~~gIrvN~I~PG~i~T~~~~~~~~~  200 (258)
T d1ae1a_         161 GAINQMTKSLACEWAKDNIRVNSVAPGVILTPLVETAIKK  200 (258)
T ss_dssp             HHHHHHHHHHHHHHGGGTEEEEEEEECSBC----------
T ss_pred             HHHHHHHHHHHHhcCcCcEEEEEEeeCcccCcchhhhhhh
Confidence            99999999999999985 9999999999999998766443

>d1uzma1 c.2.1.2 (A:9-245) beta-keto acyl carrier protein reductase {Mycobacterium tuberculosis [TaxId: 1773]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: beta-keto acyl carrier protein reductase
species: Mycobacterium tuberculosis [TaxId: 1773]

Probab=100.00  E-value=4.4e-44  Score=295.69  Aligned_cols=182  Identities=24%  Similarity=0.413  Sum_probs=160.6

Q ss_pred             cCCCCCEEEEcCCCChHHHHHHHHHHHcCCeEEEEeCCcchHHHHHHHHHhhCCCcEEEEEccCCCHHHHHHHHHHHHhH
Q 044010           43 EDVSGKVVIITGASSGIGEHLAYEYARRGACLALCARREKSLEEVADTAREIGSPDVITIRADVSKVDDCRSLVEETMNH  122 (248)
Q Consensus        43 ~~~~~k~~lVtGg~~gIG~aia~~l~~~G~~V~l~~r~~~~~~~~~~~l~~~~~~~v~~~~~D~~~~~~~~~~~~~~~~~  122 (248)
                      .+++||++|||||++|||+++|++|+++|++|++++|+.+..+            ++..+++|++|+++++++++++.++
T Consensus         3 psl~gK~~lITGas~GIG~aia~~la~~Ga~V~~~~r~~~~~~------------~~~~~~~Dv~~~~~v~~~~~~~~~~   70 (237)
T d1uzma1           3 PPFVSRSVLVTGGNRGIGLAIAQRLAADGHKVAVTHRGSGAPK------------GLFGVEVDVTDSDAVDRAFTAVEEH   70 (237)
T ss_dssp             CCCCCCEEEETTTTSHHHHHHHHHHHHTTCEEEEEESSSCCCT------------TSEEEECCTTCHHHHHHHHHHHHHH
T ss_pred             CCCCCCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEECCcchhc------------CceEEEEecCCHHHHHHHHHHHHHh
Confidence            4789999999999999999999999999999999999876432            5678999999999999999999999


Q ss_pred             cCCccEEEEccccCCcccccccCChHHHHHHHHhhhHHHHHHHHHHhhhhhhcC-CeEEEEcCccccccCCCCccchHHH
Q 044010          123 FGRLDHLVNNAGISSVALFEDIVNITDFKQIMNINFWGSVYTTRFAVPHLRYTK-GKIVVLSSAASWLTAPRMSFYNASK  201 (248)
Q Consensus       123 ~g~id~vv~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~-g~iV~isS~~~~~~~~~~~~Y~~sK  201 (248)
                      +|++|++|||||...+.++.+ .+.++|++++++|+.+++.++|++.|.|.+++ |+||++||..+..+.++..+|++||
T Consensus        71 ~g~iDiLVnnAG~~~~~~~~~-~~~e~~~~~~~vNl~~~~~~~~~~~~~m~~~~~g~Iv~isS~~~~~~~~~~~~Y~asK  149 (237)
T d1uzma1          71 QGPVEVLVSNAGLSADAFLMR-MTEEKFEKVINANLTGAFRVAQRASRSMQRNKFGRMIFIGSVSGLWGIGNQANYAASK  149 (237)
T ss_dssp             HSSCSEEEEECSCCC-----C-CCHHHHHHHHHHHTHHHHHHHHHHHHHHHHTTCEEEEEECCCCC-----CCHHHHHHH
T ss_pred             cCCceEEEeeecccccccHhh-CCHHHHHHHHHhhhhhhhhhhhhhhhcccccCCCceEEEcchhhccCCcccHHHHHHH
Confidence            999999999999987777666 57899999999999999999999999998665 7999999999999999999999999


Q ss_pred             HHHHHHHHHHHHHhCCC-eEEEEEecCccccCccccc
Q 044010          202 AALVLFFETLRVELGSD-VGVTIVTPGFIESELTQGK  237 (248)
Q Consensus       202 aal~~l~~~la~~~~~~-i~v~~v~pg~v~T~~~~~~  237 (248)
                      +|+++|+++++.|++++ ||||+|+||+++|+|.+..
T Consensus       150 aal~~lt~~lA~e~~~~gIrVN~I~PG~v~T~~~~~~  186 (237)
T d1uzma1         150 AGVIGMARSIARELSKANVTANVVAPGYIDTDMTRAL  186 (237)
T ss_dssp             HHHHHHHHHHHHHHGGGTEEEEEEEECSBCCHHHHHS
T ss_pred             HHHHHHHHHHHhhhhcCCceeeeeeeCcCCChhhhcc
Confidence            99999999999999885 9999999999999998754

>d1xhla_ c.2.1.2 (A:) Hypothetical protein F25D1.5 {Caenorhabditis elegans [TaxId: 6239]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Hypothetical protein F25D1.5
species: Caenorhabditis elegans [TaxId: 6239]

Probab=100.00  E-value=1.6e-43  Score=298.33  Aligned_cols=195  Identities=29%  Similarity=0.388  Sum_probs=175.9

Q ss_pred             CCCCCEEEEcCCCChHHHHHHHHHHHcCCeEEEEeCCcchHHHHHHHHHhhCC--CcEEEEEccCCCHHHHHHHHHHHHh
Q 044010           44 DVSGKVVIITGASSGIGEHLAYEYARRGACLALCARREKSLEEVADTAREIGS--PDVITIRADVSKVDDCRSLVEETMN  121 (248)
Q Consensus        44 ~~~~k~~lVtGg~~gIG~aia~~l~~~G~~V~l~~r~~~~~~~~~~~l~~~~~--~~v~~~~~D~~~~~~~~~~~~~~~~  121 (248)
                      +++||++|||||++|||+++|++|+++|++|++++|+++++++..+++++.+.  .++..+.+|++|+++++++++++.+
T Consensus         1 rL~gK~alITGas~GIG~aia~~la~~Ga~V~~~~r~~~~l~~~~~~i~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~   80 (274)
T d1xhla_           1 RFSGKSVIITGSSNGIGRSAAVIFAKEGAQVTITGRNEDRLEETKQQILKAGVPAEKINAVVADVTEASGQDDIINTTLA   80 (274)
T ss_dssp             CCTTCEEEETTCSSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHTTCCGGGEEEEECCTTSHHHHHHHHHHHHH
T ss_pred             CCCCCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHHcCCCCcceEEEEeeCCCHHHHHHHHHHHHH
Confidence            57999999999999999999999999999999999999999999999987653  3689999999999999999999999


Q ss_pred             HcCCccEEEEccccCCccc-ccccCChHHHHHHHHhhhHHHHHHHHHHhhhhhhcC-CeEEEEcCccccccCCCCccchH
Q 044010          122 HFGRLDHLVNNAGISSVAL-FEDIVNITDFKQIMNINFWGSVYTTRFAVPHLRYTK-GKIVVLSSAASWLTAPRMSFYNA  199 (248)
Q Consensus       122 ~~g~id~vv~~ag~~~~~~-~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~-g~iV~isS~~~~~~~~~~~~Y~~  199 (248)
                      ++|++|++|||||...... .....+.++|++.+++|+.+++.++|++.|.|++++ |+|+++||.++..+.+++++|++
T Consensus        81 ~~G~iDilVnnAG~~~~~~~~~~~~~~e~~~~~~~vNl~~~~~~~~~~~~~m~~~~~g~ii~~ss~~~~~~~~~~~~Y~a  160 (274)
T d1xhla_          81 KFGKIDILVNNAGANLADGTANTDQPVELYQKTFKLNFQAVIEMTQKTKEHLIKTKGEIVNVSSIVAGPQAHSGYPYYAC  160 (274)
T ss_dssp             HHSCCCEEEECCCCCCCCSCCGGGSCHHHHHHHHHHHTHHHHHHHHHHHHHHHHTTCEEEEECCGGGSSSCCTTSHHHHH
T ss_pred             HcCCceEEEeecccccccccccccCCHHHHHHHHhhcccccccccccccccccccccccccchhhhhccccCCCCceehh
Confidence            9999999999999764433 233346789999999999999999999999998655 67787888888889999999999


Q ss_pred             HHHHHHHHHHHHHHHhCCC-eEEEEEecCccccCcccccc
Q 044010          200 SKAALVLFFETLRVELGSD-VGVTIVTPGFIESELTQGKF  238 (248)
Q Consensus       200 sKaal~~l~~~la~~~~~~-i~v~~v~pg~v~T~~~~~~~  238 (248)
                      ||+|+++|++++|.|++++ ||||+|+||+|+|||.....
T Consensus       161 sKaal~~ltk~lA~ela~~gIrVN~I~PG~i~T~~~~~~~  200 (274)
T d1xhla_         161 AKAALDQYTRCTAIDLIQHGVRVNSVSPGAVATGFMGAMG  200 (274)
T ss_dssp             HHHHHHHHHHHHHHHHGGGTCEEEEEEECCBCSSHHHHTT
T ss_pred             hhhHHHHHHHHHHHHHhHhCCceeeeccCCCcCchhhhhc
Confidence            9999999999999999985 99999999999999876554

>d1h5qa_ c.2.1.2 (A:) Mannitol dehydrogenase {Mushroom (Agaricus bisporus) [TaxId: 5341]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Mannitol dehydrogenase
species: Mushroom (Agaricus bisporus) [TaxId: 5341]

Probab=100.00  E-value=2.8e-43  Score=294.78  Aligned_cols=197  Identities=27%  Similarity=0.370  Sum_probs=176.3

Q ss_pred             cccCCCCCEEEEcCCCChHHHHHHHHHHHcCCeEEEEeCCcchHHHHHHHHHhhCCCcEEEEEccCCCHHHHHHHHHHHH
Q 044010           41 FSEDVSGKVVIITGASSGIGEHLAYEYARRGACLALCARREKSLEEVADTAREIGSPDVITIRADVSKVDDCRSLVEETM  120 (248)
Q Consensus        41 ~~~~~~~k~~lVtGg~~gIG~aia~~l~~~G~~V~l~~r~~~~~~~~~~~l~~~~~~~v~~~~~D~~~~~~~~~~~~~~~  120 (248)
                      |.++++||++|||||++|||+++|++|+++|++|++++|+.+++++..+++.+..+.++..++||++|+++++++++++.
T Consensus         3 ~~m~l~gK~alITGas~GIG~aia~~la~~Ga~V~i~~r~~~~~~~~~~~~~~~~g~~~~~~~~Dv~~~~~v~~~~~~~~   82 (260)
T d1h5qa_           3 FTISFVNKTIIVTGGNRGIGLAFTRAVAAAGANVAVIYRSAADAVEVTEKVGKEFGVKTKAYQCDVSNTDIVTKTIQQID   82 (260)
T ss_dssp             EEECCTTEEEEEETTTSHHHHHHHHHHHHTTEEEEEEESSCTTHHHHHHHHHHHHTCCEEEEECCTTCHHHHHHHHHHHH
T ss_pred             CcccCCCCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHHHhCCceEEEEccCCCHHHHHHHHHHHH
Confidence            45689999999999999999999999999999999999999999998888876655689999999999999999999999


Q ss_pred             hHcCCccEEEEccccCCcccccccCChHHHHHHHHhhhHHHHHHHHHHhhhhhh--cCCeEEEEcCccccc-------cC
Q 044010          121 NHFGRLDHLVNNAGISSVALFEDIVNITDFKQIMNINFWGSVYTTRFAVPHLRY--TKGKIVVLSSAASWL-------TA  191 (248)
Q Consensus       121 ~~~g~id~vv~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~--~~g~iV~isS~~~~~-------~~  191 (248)
                      +++|++|++|||||...+.++.+ .+.++|++.+++|+.++++++|.+.|.|.+  .+|+|++.+|.....       +.
T Consensus        83 ~~~g~iDilVnnAg~~~~~~~~~-~~~~~~~~~~~~N~~g~~~~~~~~~~~m~~~~~~g~i~~~~s~~~~~~~~~~~~~~  161 (260)
T d1h5qa_          83 ADLGPISGLIANAGVSVVKPATE-LTHEDFAFVYDVNVFGVFNTCRAVAKLWLQKQQKGSIVVTSSMSSQIINQSSLNGS  161 (260)
T ss_dssp             HHSCSEEEEEECCCCCCCSCGGG-CCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCCEEEEEECCGGGTSCCEEETTEE
T ss_pred             HHhCCCcEecccccccccCCHHH-hccccccccccccccchhhhhhhhcccccccccceEEEEeeccccccccccccccC
Confidence            99999999999999987777766 588999999999999999999999999843  347788887766543       23


Q ss_pred             CCCccchHHHHHHHHHHHHHHHHhCCC-eEEEEEecCccccCcccccc
Q 044010          192 PRMSFYNASKAALVLFFETLRVELGSD-VGVTIVTPGFIESELTQGKF  238 (248)
Q Consensus       192 ~~~~~Y~~sKaal~~l~~~la~~~~~~-i~v~~v~pg~v~T~~~~~~~  238 (248)
                      ++..+|++||+|+++|++++|.|++++ ||||+|+||+++|+|.....
T Consensus       162 ~~~~~Y~asKaal~~lt~~lA~el~~~gIrvN~I~PG~i~T~~~~~~~  209 (260)
T d1h5qa_         162 LTQVFYNSSKAACSNLVKGLAAEWASAGIRVNALSPGYVNTDQTAHMD  209 (260)
T ss_dssp             CSCHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECSBCCGGGGGSC
T ss_pred             ccccchhhhhhhHHHHHHHHHHHhchhCeEEeecCCCcccCcchhccC
Confidence            567899999999999999999999885 99999999999999987653

>d1cyda_ c.2.1.2 (A:) Carbonyl reductase {Mouse (Mus musculus) [TaxId: 10090]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Carbonyl reductase
species: Mouse (Mus musculus) [TaxId: 10090]

Probab=100.00  E-value=2.9e-43  Score=291.63  Aligned_cols=187  Identities=22%  Similarity=0.367  Sum_probs=167.8

Q ss_pred             cCCCCCEEEEcCCCChHHHHHHHHHHHcCCeEEEEeCCcchHHHHHHHHHhhCCCcEEEEEccCCCHHHHHHHHHHHHhH
Q 044010           43 EDVSGKVVIITGASSGIGEHLAYEYARRGACLALCARREKSLEEVADTAREIGSPDVITIRADVSKVDDCRSLVEETMNH  122 (248)
Q Consensus        43 ~~~~~k~~lVtGg~~gIG~aia~~l~~~G~~V~l~~r~~~~~~~~~~~l~~~~~~~v~~~~~D~~~~~~~~~~~~~~~~~  122 (248)
                      +|++||++|||||++|||+++|++|+++|++|++++|+++++++..+++.     .+..+.+|++|++++++++    ++
T Consensus         1 mdl~GK~alITGas~GIG~aia~~la~~Ga~V~~~~r~~~~l~~~~~~~~-----~~~~~~~Dv~~~~~v~~~~----~~   71 (242)
T d1cyda_           1 LNFSGLRALVTGAGKGIGRDTVKALHASGAKVVAVTRTNSDLVSLAKECP-----GIEPVCVDLGDWDATEKAL----GG   71 (242)
T ss_dssp             CCCTTCEEEEESTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHST-----TCEEEECCTTCHHHHHHHH----TT
T ss_pred             CCCCCCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHhcC-----CCeEEEEeCCCHHHHHHHH----HH
Confidence            58999999999999999999999999999999999999887776665542     5778999999999887765    46


Q ss_pred             cCCccEEEEccccCCcccccccCChHHHHHHHHhhhHHHHHHHHHHhhhhh-h-cCCeEEEEcCccccccCCCCccchHH
Q 044010          123 FGRLDHLVNNAGISSVALFEDIVNITDFKQIMNINFWGSVYTTRFAVPHLR-Y-TKGKIVVLSSAASWLTAPRMSFYNAS  200 (248)
Q Consensus       123 ~g~id~vv~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~-~-~~g~iV~isS~~~~~~~~~~~~Y~~s  200 (248)
                      +|++|++|||||...+.++.+ .+.++|++.+++|+.+++.++|.+.|.|. + .+|+||++||..+..+.++..+|++|
T Consensus        72 ~g~iDilVnnAg~~~~~~~~~-~~~~~~~~~~~vnl~~~~~~~~~~~~~~~~~~~~g~ii~isS~~~~~~~~~~~~Y~as  150 (242)
T d1cyda_          72 IGPVDLLVNNAALVIMQPFLE-VTKEAFDRSFSVNLRSVFQVSQMVARDMINRGVPGSIVNVSSMVAHVTFPNLITYSST  150 (242)
T ss_dssp             CCCCSEEEECCCCCCCBCGGG-CCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCCEEEEEECCGGGTSCCTTBHHHHHH
T ss_pred             cCCCeEEEECCccccchhHHH-HHHHHHHHHHHHHhccchHHHHHhchhhhhhcccCcccccchhhccccCCccccccch
Confidence            799999999999988777776 58899999999999999999999999754 3 34899999999999999999999999


Q ss_pred             HHHHHHHHHHHHHHhCCC-eEEEEEecCccccCccccccc
Q 044010          201 KAALVLFFETLRVELGSD-VGVTIVTPGFIESELTQGKFL  239 (248)
Q Consensus       201 Kaal~~l~~~la~~~~~~-i~v~~v~pg~v~T~~~~~~~~  239 (248)
                      |+|+++|++++|.|++++ ||||+|+||+++|+|.+....
T Consensus       151 Kaal~~lt~~lA~e~~~~gIrvN~I~PG~i~T~~~~~~~~  190 (242)
T d1cyda_         151 KGAMTMLTKAMAMELGPHKIRVNSVNPTVVLTDMGKKVSA  190 (242)
T ss_dssp             HHHHHHHHHHHHHHHGGGTEEEEEEEECCBTTHHHHHHTC
T ss_pred             HHHHHHHHHHHHHHhCccCeecccCCCCCccCHHHHhhcC
Confidence            999999999999999985 999999999999999876544

>d1pr9a_ c.2.1.2 (A:) Carbonyl reductase {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Carbonyl reductase
species: Human (Homo sapiens) [TaxId: 9606]

Probab=100.00  E-value=5.3e-43  Score=290.44  Aligned_cols=189  Identities=23%  Similarity=0.368  Sum_probs=168.7

Q ss_pred             ccCCCCCEEEEcCCCChHHHHHHHHHHHcCCeEEEEeCCcchHHHHHHHHHhhCCCcEEEEEccCCCHHHHHHHHHHHHh
Q 044010           42 SEDVSGKVVIITGASSGIGEHLAYEYARRGACLALCARREKSLEEVADTAREIGSPDVITIRADVSKVDDCRSLVEETMN  121 (248)
Q Consensus        42 ~~~~~~k~~lVtGg~~gIG~aia~~l~~~G~~V~l~~r~~~~~~~~~~~l~~~~~~~v~~~~~D~~~~~~~~~~~~~~~~  121 (248)
                      .+.++||++|||||++|||+++|++|+++|++|++++|+++++++..+++.     .+..+.+|++|++++++++    +
T Consensus         2 ~~~L~GK~~lITGas~GIG~aia~~la~~G~~V~~~~r~~~~l~~~~~~~~-----~~~~~~~Dv~d~~~v~~~~----~   72 (244)
T d1pr9a_           2 ELFLAGRRVLVTGAGKGIGRGTVQALHATGARVVAVSRTQADLDSLVRECP-----GIEPVCVDLGDWEATERAL----G   72 (244)
T ss_dssp             CCCCTTCEEEEESTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHST-----TCEEEECCTTCHHHHHHHH----T
T ss_pred             CCCCCCCEEEEeCCCCHHHHHHHHHHHHcCCEEEEEECCHHHHHHHHHhcC-----CCeEEEEeCCCHHHHHHHH----H
Confidence            457899999999999999999999999999999999999888777665542     5678999999999987766    4


Q ss_pred             HcCCccEEEEccccCCcccccccCChHHHHHHHHhhhHHHHHHHHHHhhhh-hh-cCCeEEEEcCccccccCCCCccchH
Q 044010          122 HFGRLDHLVNNAGISSVALFEDIVNITDFKQIMNINFWGSVYTTRFAVPHL-RY-TKGKIVVLSSAASWLTAPRMSFYNA  199 (248)
Q Consensus       122 ~~g~id~vv~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~-~~-~~g~iV~isS~~~~~~~~~~~~Y~~  199 (248)
                      ++|++|++|||||.....++.+ .+.++|++.+++|+.+++.++|++.|.| ++ .+|+||++||..+..+.++..+|++
T Consensus        73 ~~g~iDilVnnAg~~~~~~~~~-~~~~~~~~~~~vnl~~~~~~~~~~~~~~~~~~~~g~Ii~isS~~~~~~~~~~~~Y~a  151 (244)
T d1pr9a_          73 SVGPVDLLVNNAAVALLQPFLE-VTKEAFDRSFEVNLRAVIQVSQIVARGLIARGVPGAIVNVSSQCSQRAVTNHSVYCS  151 (244)
T ss_dssp             TCCCCCEEEECCCCCCCBCGGG-CCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCCEEEEEECCGGGTSCCTTBHHHHH
T ss_pred             HhCCceEEEeccccccccchhh-hhHHHHHHHHHHhhhhhhHHHHHhhhHHHHhCCcceEeecccccccccccchhhhhh
Confidence            6799999999999988777766 5889999999999999999999999965 43 3599999999999999999999999


Q ss_pred             HHHHHHHHHHHHHHHhCCC-eEEEEEecCccccCcccccccc
Q 044010          200 SKAALVLFFETLRVELGSD-VGVTIVTPGFIESELTQGKFLT  240 (248)
Q Consensus       200 sKaal~~l~~~la~~~~~~-i~v~~v~pg~v~T~~~~~~~~~  240 (248)
                      ||+|+++|++++|.|++++ ||||+|+||+|+|+|.+..+.+
T Consensus       152 sKaal~~lt~~lA~el~~~gIrvN~I~PG~v~T~~~~~~~~~  193 (244)
T d1pr9a_         152 TKGALDMLTKVMALELGPHKIRVNAVNPTVVMTSMGQATWSD  193 (244)
T ss_dssp             HHHHHHHHHHHHHHHHGGGTEEEEEEEECCBCSHHHHTTSCS
T ss_pred             hHHHHHHHHHHHHHHhCCCcEEEEEEeeCcCcChHHhhhccC
Confidence            9999999999999999885 9999999999999998765443

>d1yxma1 c.2.1.2 (A:7-303) Peroxisomal trans 2-enoyl CoA reductase {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Peroxisomal trans 2-enoyl CoA reductase
species: Human (Homo sapiens) [TaxId: 9606]

Probab=100.00  E-value=3.5e-42  Score=293.11  Aligned_cols=197  Identities=22%  Similarity=0.386  Sum_probs=177.1

Q ss_pred             cccCCCCCEEEEcCCCChHHHHHHHHHHHcCCeEEEEeCCcchHHHHHHHHHhh----CCCcEEEEEccCCCHHHHHHHH
Q 044010           41 FSEDVSGKVVIITGASSGIGEHLAYEYARRGACLALCARREKSLEEVADTAREI----GSPDVITIRADVSKVDDCRSLV  116 (248)
Q Consensus        41 ~~~~~~~k~~lVtGg~~gIG~aia~~l~~~G~~V~l~~r~~~~~~~~~~~l~~~----~~~~v~~~~~D~~~~~~~~~~~  116 (248)
                      .+..++||++|||||++|||+++|++|+++|++|++++|+.+++++..+++++.    .+.++..+.||++|++++++++
T Consensus         6 ~~g~L~gKvalITGas~GIG~aia~~la~~Ga~Vvi~~r~~~~l~~~~~el~~~~~~~~~~~~~~~~~Dvs~~~~v~~~~   85 (297)
T d1yxma1           6 APGLLQGQVAIVTGGATGIGKAIVKELLELGSNVVIASRKLERLKSAADELQANLPPTKQARVIPIQCNIRNEEEVNNLV   85 (297)
T ss_dssp             CTTTTTTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHTSCTTCCCCEEEEECCTTCHHHHHHHH
T ss_pred             CCCCCCCCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHhhhccccCceEEEEeccCCCHHHHHHHH
Confidence            345799999999999999999999999999999999999999999999988754    2347899999999999999999


Q ss_pred             HHHHhHcCCccEEEEccccCCcccccccCChHHHHHHHHhhhHHHHHHHHHHhhhhhhc-CCeEEEEcCccccccCCCCc
Q 044010          117 EETMNHFGRLDHLVNNAGISSVALFEDIVNITDFKQIMNINFWGSVYTTRFAVPHLRYT-KGKIVVLSSAASWLTAPRMS  195 (248)
Q Consensus       117 ~~~~~~~g~id~vv~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~-~g~iV~isS~~~~~~~~~~~  195 (248)
                      +++.+++|++|++|||||.....++.+ .+.++|++.+++|+.++++++|++.|.|.++ .|+||++|| .+..+.+...
T Consensus        86 ~~~~~~~G~iDiLVnnAg~~~~~~~~~-~~~e~~~~~~~vNl~g~~~~~~~~~~~m~~~~~g~Ii~~ss-~~~~~~~~~~  163 (297)
T d1yxma1          86 KSTLDTFGKINFLVNNGGGQFLSPAEH-ISSKGWHAVLETNLTGTFYMCKAVYSSWMKEHGGSIVNIIV-PTKAGFPLAV  163 (297)
T ss_dssp             HHHHHHHSCCCEEEECCCCCCCCCGGG-CCHHHHHHHHHHHTHHHHHHHHHHHHHTHHHHCEEEEEECC-CCTTCCTTCH
T ss_pred             HHHHHHhCCeEEEEeeccccccCchhh-hhhhhhhhhhcccccchhhHHHHHHHhhccccccccccccc-cccccccccc
Confidence            999999999999999999887777766 5889999999999999999999999998755 478888865 4556778899


Q ss_pred             cchHHHHHHHHHHHHHHHHhCCC-eEEEEEecCccccCccccccc
Q 044010          196 FYNASKAALVLFFETLRVELGSD-VGVTIVTPGFIESELTQGKFL  239 (248)
Q Consensus       196 ~Y~~sKaal~~l~~~la~~~~~~-i~v~~v~pg~v~T~~~~~~~~  239 (248)
                      .|++||+|+++|++++|.|++++ ||||+|+||+|+|+|..+...
T Consensus       164 ~Y~asKaal~~ltk~lA~el~~~gIrVN~I~PG~i~T~~~~~~~~  208 (297)
T d1yxma1         164 HSGAARAGVYNLTKSLALEWACSGIRINCVAPGVIYSQTAVENYG  208 (297)
T ss_dssp             HHHHHHHHHHHHHHHHHHHTGGGTEEEEEEEECSBCCTGGGTTSG
T ss_pred             cchhHHHHHHHHHHHHHHHhcccCceEEEeeeCcCcCcchhhhcc
Confidence            99999999999999999999885 999999999999999765543

>d2gdza1 c.2.1.2 (A:3-256) 15-hydroxyprostaglandin dehydrogenase, PGDH {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: 15-hydroxyprostaglandin dehydrogenase, PGDH
species: Human (Homo sapiens) [TaxId: 9606]

Probab=100.00  E-value=6.2e-43  Score=291.76  Aligned_cols=187  Identities=28%  Similarity=0.427  Sum_probs=170.6

Q ss_pred             CCCCEEEEcCCCChHHHHHHHHHHHcCCeEEEEeCCcchHHHHHHHHHhhC-CCcEEEEEccCCCHHHHHHHHHHHHhHc
Q 044010           45 VSGKVVIITGASSGIGEHLAYEYARRGACLALCARREKSLEEVADTAREIG-SPDVITIRADVSKVDDCRSLVEETMNHF  123 (248)
Q Consensus        45 ~~~k~~lVtGg~~gIG~aia~~l~~~G~~V~l~~r~~~~~~~~~~~l~~~~-~~~v~~~~~D~~~~~~~~~~~~~~~~~~  123 (248)
                      ++||++|||||++|||+++|++|+++|++|++++|+.+++++..+++.+.. +.++.++.||++|+++++++++++.+++
T Consensus         1 i~GKvalITGas~GIG~aia~~la~~Ga~V~i~~r~~~~~~~~~~~l~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~~   80 (254)
T d2gdza1           1 VNGKVALVTGAAQGIGRAFAEALLLKGAKVALVDWNLEAGVQCKAALHEQFEPQKTLFIQCDVADQQQLRDTFRKVVDHF   80 (254)
T ss_dssp             CTTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHTTTSCGGGEEEEECCTTSHHHHHHHHHHHHHHH
T ss_pred             CCCCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHHhcCCCcEEEEEeecCCHHHHHHHHHHHHHHc
Confidence            479999999999999999999999999999999999999999998887653 4578999999999999999999999999


Q ss_pred             CCccEEEEccccCCcccccccCChHHHHHHHHhhhHHHHHHHHHHhhhhhhc----CCeEEEEcCccccccCCCCccchH
Q 044010          124 GRLDHLVNNAGISSVALFEDIVNITDFKQIMNINFWGSVYTTRFAVPHLRYT----KGKIVVLSSAASWLTAPRMSFYNA  199 (248)
Q Consensus       124 g~id~vv~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~----~g~iV~isS~~~~~~~~~~~~Y~~  199 (248)
                      |++|++|||||....         ++|++.+++|+.+++.+.+.++|.|.++    +|+||++||.++..+.+++++|++
T Consensus        81 G~iDilVnnAg~~~~---------~~~~~~~~~n~~~~~~~~~~~~~~m~~~~~~~~g~Iv~isS~~~~~~~~~~~~Y~a  151 (254)
T d2gdza1          81 GRLDILVNNAGVNNE---------KNWEKTLQINLVSVISGTYLGLDYMSKQNGGEGGIIINMSSLAGLMPVAQQPVYCA  151 (254)
T ss_dssp             SCCCEEEECCCCCCS---------SSHHHHHHHHTHHHHHHHHHHHHHHCGGGTCCCEEEEEECCGGGTSCCTTCHHHHH
T ss_pred             CCcCeeccccccccc---------ccchheeeeehhhHHHHHHHHHHHHHHhhcCCCcEEEeeccHhhccCCCCccchHH
Confidence            999999999998532         4588999999999999999999999654    378999999999999999999999


Q ss_pred             HHHHHHHHHHH--HHHHhCCC-eEEEEEecCccccCcccccccc
Q 044010          200 SKAALVLFFET--LRVELGSD-VGVTIVTPGFIESELTQGKFLT  240 (248)
Q Consensus       200 sKaal~~l~~~--la~~~~~~-i~v~~v~pg~v~T~~~~~~~~~  240 (248)
                      ||+|+.+|+|+  |+.|+++. ||||+|+||+|+|+|.+....+
T Consensus       152 sKaal~~ltrs~ala~e~~~~gIrVN~I~PG~i~T~~~~~~~~~  195 (254)
T d2gdza1         152 SKHGIVGFTRSAALAANLMNSGVRLNAICPGFVNTAILESIEKE  195 (254)
T ss_dssp             HHHHHHHHHHHHHHHHHHHTCCEEEEEEEESCBSSHHHHGGGCH
T ss_pred             HHHHHHHHHHHHHHHHHhcCCCEEEEEEEcCCCCChhhhhcccc
Confidence            99999999997  78899875 9999999999999998776544

>d1xg5a_ c.2.1.2 (A:) Putative dehydrogenase ARPG836 (MGC4172) {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Putative dehydrogenase ARPG836 (MGC4172)
species: Human (Homo sapiens) [TaxId: 9606]

Probab=100.00  E-value=1.1e-41  Score=284.55  Aligned_cols=195  Identities=26%  Similarity=0.414  Sum_probs=176.8

Q ss_pred             cCCCCCEEEEcCCCChHHHHHHHHHHHcCCeEEEEeCCcchHHHHHHHHHhhC-CCcEEEEEccCCCHHHHHHHHHHHHh
Q 044010           43 EDVSGKVVIITGASSGIGEHLAYEYARRGACLALCARREKSLEEVADTAREIG-SPDVITIRADVSKVDDCRSLVEETMN  121 (248)
Q Consensus        43 ~~~~~k~~lVtGg~~gIG~aia~~l~~~G~~V~l~~r~~~~~~~~~~~l~~~~-~~~v~~~~~D~~~~~~~~~~~~~~~~  121 (248)
                      .+++||++|||||++|||+++|++|+++|++|++++|+++++++..+++++.+ +.++.+++||++++++++++++++.+
T Consensus         6 ~~lk~Kv~lITGas~GIG~aiA~~la~~G~~Vv~~~r~~~~l~~~~~~l~~~~~~~~~~~~~~Dls~~~~v~~~v~~~~~   85 (257)
T d1xg5a_           6 ERWRDRLALVTGASGGIGAAVARALVQQGLKVVGCARTVGNIEELAAECKSAGYPGTLIPYRCDLSNEEDILSMFSAIRS   85 (257)
T ss_dssp             GGGTTCEEEEESTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHTTCSSEEEEEECCTTCHHHHHHHHHHHHH
T ss_pred             CCCCCCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHhcCCCceEEEEEccCCCHHHHHHHHHHHHH
Confidence            45999999999999999999999999999999999999999999999998875 34788999999999999999999999


Q ss_pred             HcCCccEEEEccccCCcccccccCChHHHHHHHHhhhHHHHHHHHHHhhhhhhc---CCeEEEEcCcccccc--CCCCcc
Q 044010          122 HFGRLDHLVNNAGISSVALFEDIVNITDFKQIMNINFWGSVYTTRFAVPHLRYT---KGKIVVLSSAASWLT--APRMSF  196 (248)
Q Consensus       122 ~~g~id~vv~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~---~g~iV~isS~~~~~~--~~~~~~  196 (248)
                      ++|++|++|||||...+.++.+ .+.++|++.+++|+.+++++.+++.|.|.+.   +|+||++||.++...  .+....
T Consensus        86 ~~g~iD~lVnnAg~~~~~~~~~-~~~~~~~~~~~~nl~~~~~~~~~~~~~~~~~~~~~g~Ii~isS~~~~~~~p~~~~~~  164 (257)
T d1xg5a_          86 QHSGVDICINNAGLARPDTLLS-GSTSGWKDMFNVNVLALSICTREAYQSMKERNVDDGHIININSMSGHRVLPLSVTHF  164 (257)
T ss_dssp             HHCCCSEEEECCCCCCCCCTTT-CCHHHHHHHHHHHTHHHHHHHHHHHHHHHHTTCCSCEEEEECCGGGTSCCSCGGGHH
T ss_pred             hcCCCCEEEecccccCCCcccc-ccHHHHHhhhhhhhhHHHHHHHHHHHHHHHhccCCCceEEEechHhcCCCCCcccHH
Confidence            9999999999999988777766 5889999999999999999999999998643   489999999998654  455667


Q ss_pred             chHHHHHHHHHHHHHHHHh--CC-CeEEEEEecCccccCcccccc
Q 044010          197 YNASKAALVLFFETLRVEL--GS-DVGVTIVTPGFIESELTQGKF  238 (248)
Q Consensus       197 Y~~sKaal~~l~~~la~~~--~~-~i~v~~v~pg~v~T~~~~~~~  238 (248)
                      |++||+|+.+|+++|+.|+  ++ +||||+|+||+++|++.....
T Consensus       165 Y~~sKaal~~ltr~la~el~~~~~~I~vn~i~PG~i~t~~~~~~~  209 (257)
T d1xg5a_         165 YSATKYAVTALTEGLRQELREAQTHIRATCISPGVVETQFAFKLH  209 (257)
T ss_dssp             HHHHHHHHHHHHHHHHHHHHHTTCCCEEEEEEESCBCSSHHHHHT
T ss_pred             HHHHHHHHHhCHHHHHHHHHhCCCCEEEEEEeCCCCCChhhhhcC
Confidence            9999999999999999998  45 599999999999999977654

>d1sbya1 c.2.1.2 (A:1-254) Drosophila alcohol dehydrogenase {Fly (Drosophila lebanonensis) [TaxId: 7225]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Drosophila alcohol dehydrogenase
species: Fly (Drosophila lebanonensis) [TaxId: 7225]

Probab=100.00  E-value=4.4e-42  Score=286.49  Aligned_cols=186  Identities=24%  Similarity=0.299  Sum_probs=167.1

Q ss_pred             cCCCCCEEEEcCCCChHHHHHHHHHHHcCCeEEEEeCCcchHHHHHHHHHhhCCCcEEEEEccCC-CHHHHHHHHHHHHh
Q 044010           43 EDVSGKVVIITGASSGIGEHLAYEYARRGACLALCARREKSLEEVADTAREIGSPDVITIRADVS-KVDDCRSLVEETMN  121 (248)
Q Consensus        43 ~~~~~k~~lVtGg~~gIG~aia~~l~~~G~~V~l~~r~~~~~~~~~~~l~~~~~~~v~~~~~D~~-~~~~~~~~~~~~~~  121 (248)
                      +|++||++|||||++|||+++|++|+++|++|++++|+.++.+...+.....++.++.++.+|++ +.++++++++++.+
T Consensus         1 m~l~gK~vlITGgs~GIG~~~A~~la~~G~~vii~~r~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~   80 (254)
T d1sbya1           1 MDLTNKNVIFVAALGGIGLDTSRELVKRNLKNFVILDRVENPTALAELKAINPKVNITFHTYDVTVPVAESKKLLKKIFD   80 (254)
T ss_dssp             CCCTTCEEEEETTTSHHHHHHHHHHHHTCCSEEEEEESSCCHHHHHHHHHHCTTSEEEEEECCTTSCHHHHHHHHHHHHH
T ss_pred             CCCCCCEEEEecCCCHHHHHHHHHHHHCCCEEEEEECCcccHHHHHHHHhhCCCCCEEEEEeecCCCHHHHHHHHHHHHH
Confidence            58999999999999999999999999999999999998877666655444455558899999998 67789999999999


Q ss_pred             HcCCccEEEEccccCCcccccccCChHHHHHHHHhhhHHHHHHHHHHhhhhhhc----CCeEEEEcCccccccCCCCccc
Q 044010          122 HFGRLDHLVNNAGISSVALFEDIVNITDFKQIMNINFWGSVYTTRFAVPHLRYT----KGKIVVLSSAASWLTAPRMSFY  197 (248)
Q Consensus       122 ~~g~id~vv~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~----~g~iV~isS~~~~~~~~~~~~Y  197 (248)
                      ++|++|++|||||..         +.++|++++++|+.|+++++++++|.|.++    +|+||++||.++..+.+++.+|
T Consensus        81 ~~g~iDilvnnAG~~---------~~~~~~~~~~vNl~g~~~~~~~~~~~m~~~~~~~~g~Ii~isS~~~~~~~~~~~~Y  151 (254)
T d1sbya1          81 QLKTVDILINGAGIL---------DDHQIERTIAINFTGLVNTTTAILDFWDKRKGGPGGIIANICSVTGFNAIHQVPVY  151 (254)
T ss_dssp             HHSCCCEEEECCCCC---------CTTCHHHHHHHHTHHHHHHHHHHHHHHCGGGTCCCEEEEEECCGGGTSCCTTSHHH
T ss_pred             HcCCCCEEEeCCCCC---------CHHHHHHHHHHHhHHHHHHHHHHHHHhhhcccCCCceEEEEechhhccCCCCCHHH
Confidence            999999999999953         347799999999999999999999999653    3899999999999999999999


Q ss_pred             hHHHHHHHHHHHHHHHHhCC-CeEEEEEecCccccCccccc
Q 044010          198 NASKAALVLFFETLRVELGS-DVGVTIVTPGFIESELTQGK  237 (248)
Q Consensus       198 ~~sKaal~~l~~~la~~~~~-~i~v~~v~pg~v~T~~~~~~  237 (248)
                      ++||+|+.+|+++++.|+++ +||||+|+||+|+|+|.+..
T Consensus       152 ~asKaal~~~t~~la~el~~~gIrVn~I~PG~v~T~~~~~~  192 (254)
T d1sbya1         152 SASKAAVVSFTNSLAKLAPITGVTAYSINPGITRTPLVHTF  192 (254)
T ss_dssp             HHHHHHHHHHHHHHHHHHHHHSEEEEEEEECSEESHHHHSC
T ss_pred             HHHHHHHHHHHHHHHhhccccCeEEEEEEeCCCcCcccccc
Confidence            99999999999999999987 59999999999999987654

>d1ja9a_ c.2.1.2 (A:) 1,3,6,8-tetrahydroxynaphthalene reductase {Rice blast fungus (Magnaporthe grisea) [TaxId: 148305]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: 1,3,6,8-tetrahydroxynaphthalene reductase
species: Rice blast fungus (Magnaporthe grisea) [TaxId: 148305]

Probab=100.00  E-value=8.1e-42  Score=285.72  Aligned_cols=194  Identities=30%  Similarity=0.507  Sum_probs=172.4

Q ss_pred             cCCCCCEEEEcCCCChHHHHHHHHHHHcCCeEEEEeC-CcchHHHHHHHHHhhCCCcEEEEEccCCCHHHHHHHHHHHHh
Q 044010           43 EDVSGKVVIITGASSGIGEHLAYEYARRGACLALCAR-REKSLEEVADTAREIGSPDVITIRADVSKVDDCRSLVEETMN  121 (248)
Q Consensus        43 ~~~~~k~~lVtGg~~gIG~aia~~l~~~G~~V~l~~r-~~~~~~~~~~~l~~~~~~~v~~~~~D~~~~~~~~~~~~~~~~  121 (248)
                      .+++||++|||||++|||+++|+.|+++|++|++++| +.+..++..+++++.+. ++..+.||++|+++++++++++.+
T Consensus         2 ~~L~GK~alITGas~GIG~aia~~la~~G~~Vvi~~~~~~~~~~~~~~~~~~~g~-~~~~~~~D~~~~~~v~~~~~~~~~   80 (259)
T d1ja9a_           2 KPLAGKVALTTGAGRGIGRGIAIELGRRGASVVVNYGSSSKAAEEVVAELKKLGA-QGVAIQADISKPSEVVALFDKAVS   80 (259)
T ss_dssp             CTTTTCEEEETTTTSHHHHHHHHHHHHTTCEEEEEESSCHHHHHHHHHHHHHTTC-CEEEEECCTTSHHHHHHHHHHHHH
T ss_pred             CCCCCCEEEEeCCCCHHHHHHHHHHHHcCCEEEEEcCCChHHHHHHHHHHHHcCC-CceEecCCCCCHHHHHHHHHHHHH
Confidence            4689999999999999999999999999999998755 55557788888887765 789999999999999999999999


Q ss_pred             HcCCccEEEEccccCCcccccccCChHHHHHHHHhhhHHHHHHHHHHhhhhhhcCCeEEEEcCccc-cccCCCCccchHH
Q 044010          122 HFGRLDHLVNNAGISSVALFEDIVNITDFKQIMNINFWGSVYTTRFAVPHLRYTKGKIVVLSSAAS-WLTAPRMSFYNAS  200 (248)
Q Consensus       122 ~~g~id~vv~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~g~iV~isS~~~-~~~~~~~~~Y~~s  200 (248)
                      ++|++|++|||||.....++.+ .+.++|++.+++|+.++++++|+++|.|++ .|++++++|..+ ..+.+++..|++|
T Consensus        81 ~~g~idilinnag~~~~~~~~~-~~~~~~~~~~~~n~~~~~~~~~~~~~~m~~-~g~~iii~s~~~~~~~~~~~~~Y~as  158 (259)
T d1ja9a_          81 HFGGLDFVMSNSGMEVWCDELE-VTQELFDKVFNLNTRGQFFVAQQGLKHCRR-GGRIILTSSIAAVMTGIPNHALYAGS  158 (259)
T ss_dssp             HHSCEEEEECCCCCCCCCCGGG-CCHHHHHHHHHHHTHHHHHHHHHHHHHEEE-EEEEEEECCGGGTCCSCCSCHHHHHH
T ss_pred             HcCCCcEEEecccccccccccc-chHHHHHHHHhhccceeeeehhhhhhhhhc-CCcccccccccccccCCCCchhHHHH
Confidence            9999999999999987777766 578999999999999999999999999974 467777766555 4578899999999


Q ss_pred             HHHHHHHHHHHHHHhCCC-eEEEEEecCccccCccccccc
Q 044010          201 KAALVLFFETLRVELGSD-VGVTIVTPGFIESELTQGKFL  239 (248)
Q Consensus       201 Kaal~~l~~~la~~~~~~-i~v~~v~pg~v~T~~~~~~~~  239 (248)
                      |+|+++|+|+||+|+++. ||||+|+||+++|+|.+....
T Consensus       159 K~al~~l~r~lA~e~~~~gIrvN~I~PG~i~T~~~~~~~~  198 (259)
T d1ja9a_         159 KAAVEGFCRAFAVDCGAKGVTVNCIAPGGVKTDMFDENSW  198 (259)
T ss_dssp             HHHHHHHHHHHHHHHGGGTCEEEEEEECCBSSHHHHHHGG
T ss_pred             HHHHHHHHHHHHHHHhhcCeEEeccCcCCccChhhhhhhh
Confidence            999999999999999985 999999999999999766543

>d1gz6a_ c.2.1.2 (A:) (3R)-hydroxyacyl-CoA dehydrogenase domain of estradiol 17 beta-Dehydrogenase 4 {Rat (Rattus norvegicus) [TaxId: 10116]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: (3R)-hydroxyacyl-CoA dehydrogenase domain of estradiol 17 beta-Dehydrogenase 4
species: Rat (Rattus norvegicus) [TaxId: 10116]

Probab=100.00  E-value=7.7e-42  Score=291.54  Aligned_cols=192  Identities=27%  Similarity=0.381  Sum_probs=171.9

Q ss_pred             ccCCCCCEEEEcCCCChHHHHHHHHHHHcCCeEEEEeCCc---------chHHHHHHHHHhhCCCcEEEEEccCCCHHHH
Q 044010           42 SEDVSGKVVIITGASSGIGEHLAYEYARRGACLALCARRE---------KSLEEVADTAREIGSPDVITIRADVSKVDDC  112 (248)
Q Consensus        42 ~~~~~~k~~lVtGg~~gIG~aia~~l~~~G~~V~l~~r~~---------~~~~~~~~~l~~~~~~~v~~~~~D~~~~~~~  112 (248)
                      +++++||++|||||++|||+++|++|+++|++|++.+|+.         +.+++..+++...+    ....+|+++.+++
T Consensus         2 Pm~l~gKvalITGas~GIG~aiA~~la~~Ga~Vvi~d~~~~~~~~~~~~~~~~~~~~~~~~~~----~~~~~d~~~~~~~   77 (302)
T d1gz6a_           2 PLRFDGRVVLVTGAGGGLGRAYALAFAERGALVVVNDLGGDFKGVGKGSSAADKVVEEIRRRG----GKAVANYDSVEAG   77 (302)
T ss_dssp             CCCCTTCEEEETTTTSHHHHHHHHHHHHTTCEEEEECCCBCTTSCBCCSHHHHHHHHHHHHTT----CEEEEECCCGGGH
T ss_pred             CcCcCCCEEEEeCCCCHHHHHHHHHHHHcCCEEEEEeCCchhhhhhhhHHHHHHHHHHHhhcc----cccccccchHHHH
Confidence            5789999999999999999999999999999999997754         34555566665443    3577899999999


Q ss_pred             HHHHHHHHhHcCCccEEEEccccCCcccccccCChHHHHHHHHhhhHHHHHHHHHHhhhhhhcC-CeEEEEcCccccccC
Q 044010          113 RSLVEETMNHFGRLDHLVNNAGISSVALFEDIVNITDFKQIMNINFWGSVYTTRFAVPHLRYTK-GKIVVLSSAASWLTA  191 (248)
Q Consensus       113 ~~~~~~~~~~~g~id~vv~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~-g~iV~isS~~~~~~~  191 (248)
                      +++++++.+++|++|++|||||...+.++.+ .+.++|++.+++|+.|+++++|+++|.|++++ |+||++||..+..+.
T Consensus        78 ~~~v~~~~~~~G~iDiLVnNAGi~~~~~~~~-~~~e~~~~~~~vNl~g~~~~~~~~~p~m~~~~~G~IV~isS~~~~~~~  156 (302)
T d1gz6a_          78 EKLVKTALDTFGRIDVVVNNAGILRDRSFSR-ISDEDWDIIQRVHLRGSFQVTRAAWDHMKKQNYGRIIMTASASGIYGN  156 (302)
T ss_dssp             HHHHHHHHHHTSCCCEEEECCCCCCCCCGGG-CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTCEEEEEECCHHHHHCC
T ss_pred             HHHHHHHHHHcCCCCEEEECCccCCCCChhh-CCHHHHhhhhceeehhhHHHHHHhHHHHHhCCCcEEEEeCChhhcCCC
Confidence            9999999999999999999999988877776 58899999999999999999999999998655 999999999999999


Q ss_pred             CCCccchHHHHHHHHHHHHHHHHhCCC-eEEEEEecCccccCcccccc
Q 044010          192 PRMSFYNASKAALVLFFETLRVELGSD-VGVTIVTPGFIESELTQGKF  238 (248)
Q Consensus       192 ~~~~~Y~~sKaal~~l~~~la~~~~~~-i~v~~v~pg~v~T~~~~~~~  238 (248)
                      ++..+|++||+|+.+|+++++.|+++. ||||+|+||++.|++.....
T Consensus       157 ~~~~~Y~asKaal~~lt~~la~E~~~~gIrVN~I~PG~~~t~~~~~~~  204 (302)
T d1gz6a_         157 FGQANYSAAKLGLLGLANTLVIEGRKNNIHCNTIAPNAGSRMTETVMP  204 (302)
T ss_dssp             TTCHHHHHHHHHHHHHHHHHHHHTGGGTEEEEEEEEECCSTTTGGGSC
T ss_pred             CCcHHHHHHHHHHHHHHHHHHHHHhccCCceeeeCCCCCCcchhhcCc
Confidence            999999999999999999999999885 99999999999988766543

>d1oaaa_ c.2.1.2 (A:) Sepiapterin reductase {Mouse (Mus musculus) [TaxId: 10090]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Sepiapterin reductase
species: Mouse (Mus musculus) [TaxId: 10090]

Probab=100.00  E-value=2.8e-41  Score=282.35  Aligned_cols=195  Identities=22%  Similarity=0.269  Sum_probs=173.9

Q ss_pred             cCCCCCEEEEcCCCChHHHHHHHHHHH---cCCeEEEEeCCcchHHHHHHHHHhhC-CCcEEEEEccCCCHHHHHHHHHH
Q 044010           43 EDVSGKVVIITGASSGIGEHLAYEYAR---RGACLALCARREKSLEEVADTAREIG-SPDVITIRADVSKVDDCRSLVEE  118 (248)
Q Consensus        43 ~~~~~k~~lVtGg~~gIG~aia~~l~~---~G~~V~l~~r~~~~~~~~~~~l~~~~-~~~v~~~~~D~~~~~~~~~~~~~  118 (248)
                      +.|+||+++||||++|||+++|++|++   +|++|++++|+.+++++..++++..+ +.++.++.||+++++++++++++
T Consensus         2 ~~L~gKvalITGas~GIG~aiA~~lA~~~~~G~~Vv~~~r~~~~l~~~~~~l~~~~~~~~~~~~~~Dvs~~~~v~~l~~~   81 (259)
T d1oaaa_           2 DGLGCAVCVLTGASRGFGRALAPQLARLLSPGSVMLVSARSESMLRQLKEELGAQQPDLKVVLAAADLGTEAGVQRLLSA   81 (259)
T ss_dssp             CCCBSEEEEESSCSSHHHHHHHHHHHTTBCTTCEEEEEESCHHHHHHHHHHHHHHCTTSEEEEEECCTTSHHHHHHHHHH
T ss_pred             CCCCCCEEEEeCCCCHHHHHHHHHHHhcccCCCEEEEEECCHHHHHHHHHHHHhhcCCceEEEEEccCCCHHHHHHHHHH
Confidence            478999999999999999999999996   79999999999999999999998764 45789999999999999999999


Q ss_pred             HHhH----cCCccEEEEccccCCc--ccccccCChHHHHHHHHhhhHHHHHHHHHHhhhhhhcC---CeEEEEcCccccc
Q 044010          119 TMNH----FGRLDHLVNNAGISSV--ALFEDIVNITDFKQIMNINFWGSVYTTRFAVPHLRYTK---GKIVVLSSAASWL  189 (248)
Q Consensus       119 ~~~~----~g~id~vv~~ag~~~~--~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~---g~iV~isS~~~~~  189 (248)
                      +.+.    ++.+|++|||||...+  ....++.+.++|++++++|+.++++++|.+.|+|++++   |+||++||.++..
T Consensus        82 ~~~~~~~~~~~~~~lvnnag~~~~~~~~~~~~~~~~~~~~~~~vN~~~~~~l~~~~~~~m~~~~~~~g~Iv~isS~~~~~  161 (259)
T d1oaaa_          82 VRELPRPEGLQRLLLINNAATLGDVSKGFLNVNDLAEVNNYWALNLTSMLCLTSGTLNAFQDSPGLSKTVVNISSLCALQ  161 (259)
T ss_dssp             HHHSCCCTTCCEEEEEECCCCCCCCSSCGGGCCCHHHHHHHHHHHTHHHHHHHHHHHHTSCCCTTCEEEEEEECCGGGTS
T ss_pred             HHHhhhhccCceEEEEecccccccCCCCccccCCHHHHHHHHHHhhhhhHHHHHHHHHHHHhcCCCcccccccccccccC
Confidence            8763    4589999999997642  22334468899999999999999999999999998654   7999999999999


Q ss_pred             cCCCCccchHHHHHHHHHHHHHHHHhCCCeEEEEEecCccccCcccccc
Q 044010          190 TAPRMSFYNASKAALVLFFETLRVELGSDVGVTIVTPGFIESELTQGKF  238 (248)
Q Consensus       190 ~~~~~~~Y~~sKaal~~l~~~la~~~~~~i~v~~v~pg~v~T~~~~~~~  238 (248)
                      +.+++++|++||+|+++|+++|+.| .++||||+|+||+|+|+|.+...
T Consensus       162 ~~~~~~~Y~asKaal~~lt~~la~e-~~gIrVn~v~PG~i~T~~~~~~~  209 (259)
T d1oaaa_         162 PYKGWGLYCAGKAARDMLYQVLAAE-EPSVRVLSYAPGPLDNDMQQLAR  209 (259)
T ss_dssp             CCTTCHHHHHHHHHHHHHHHHHHHH-CTTEEEEEEECCSBSSHHHHHHH
T ss_pred             CCccchHHHHHHHHHHHHHHHHHhC-CCCCEEEEEEcCCCCCHHHHHhh
Confidence            9999999999999999999999999 55799999999999999976543

>d1zmta1 c.2.1.2 (A:2-253) Halohydrin dehalogenase HheC {Agrobacterium tumefaciens [TaxId: 358]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Halohydrin dehalogenase HheC
species: Agrobacterium tumefaciens [TaxId: 358]

Probab=100.00  E-value=7.2e-42  Score=284.93  Aligned_cols=183  Identities=18%  Similarity=0.230  Sum_probs=164.4

Q ss_pred             EEEEcCCCChHHHHHHHHHHHcCCeEEEEeCCcchHHHHHHHHHhhCCCcEEEEEccCCCHHHHHHHHHHHHhHcCCccE
Q 044010           49 VVIITGASSGIGEHLAYEYARRGACLALCARREKSLEEVADTAREIGSPDVITIRADVSKVDDCRSLVEETMNHFGRLDH  128 (248)
Q Consensus        49 ~~lVtGg~~gIG~aia~~l~~~G~~V~l~~r~~~~~~~~~~~l~~~~~~~v~~~~~D~~~~~~~~~~~~~~~~~~g~id~  128 (248)
                      |+|||||++|||+++|++|+++|++|++.+|+.++.++..+....       +..+|+++.++++++++++.+++|++|+
T Consensus         2 TAlVTGas~GiG~aiA~~la~~Ga~V~i~~r~~~~~~~~~~~~~~-------~~~~dv~~~~~~~~~~~~~~~~~G~iDi   74 (252)
T d1zmta1           2 TAIVTNVKHFGGMGSALRLSEAGHTVACHDESFKQKDELEAFAET-------YPQLKPMSEQEPAELIEAVTSAYGQVDV   74 (252)
T ss_dssp             EEEESSTTSTTHHHHHHHHHHTTCEEEECCGGGGSHHHHHHHHHH-------CTTSEECCCCSHHHHHHHHHHHHSCCCE
T ss_pred             EEEEECCCCHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHhhhCc-------EEEeccCCHHHHHHHHHHHHHHcCCCCE
Confidence            899999999999999999999999999999998887766543322       2458999999999999999999999999


Q ss_pred             EEEccccCCc-ccccccCChHHHHHHHHhhhHHHHHHHHHHhhhhhhcC-CeEEEEcCccccccCCCCccchHHHHHHHH
Q 044010          129 LVNNAGISSV-ALFEDIVNITDFKQIMNINFWGSVYTTRFAVPHLRYTK-GKIVVLSSAASWLTAPRMSFYNASKAALVL  206 (248)
Q Consensus       129 vv~~ag~~~~-~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~-g~iV~isS~~~~~~~~~~~~Y~~sKaal~~  206 (248)
                      +|||||...+ .++.+ .+.++|++.+++|+.++++++|++.|.|++++ |+||++||..+..+.+...+|++||+|+++
T Consensus        75 LVnNAg~~~~~~~~~~-~~~e~~~~~~~vnl~~~~~~~~~~~~~m~~~~~G~IV~isS~~~~~~~~~~~~Y~asKaal~~  153 (252)
T d1zmta1          75 LVSNDIFAPEFQPIDK-YAVEDYRGAVEALQIRPFALVNAVASQMKKRKSGHIIFITSATPFGPWKELSTYTSARAGACT  153 (252)
T ss_dssp             EEEECCCCCCCCCGGG-SCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCCEEEEECCSTTTSCCTTCHHHHHHHHHHHH
T ss_pred             EEECCcCCCCCCChhh-CCHHHHHHHHHHHhHHHHHHHHHHHHhhcccccceeecccccccccccccccccccccccHHH
Confidence            9999997654 44444 68899999999999999999999999997655 999999999999999999999999999999


Q ss_pred             HHHHHHHHhCCC-eEEEEEecCccccCccccccc
Q 044010          207 FFETLRVELGSD-VGVTIVTPGFIESELTQGKFL  239 (248)
Q Consensus       207 l~~~la~~~~~~-i~v~~v~pg~v~T~~~~~~~~  239 (248)
                      |+|++|.|++++ ||||+|+||+++|+|....+.
T Consensus       154 lt~~lA~ela~~gIrVN~I~PG~i~T~~~~~~~~  187 (252)
T d1zmta1         154 LANALSKELGEYNIPVFAIGPNYLHSEDSPYFYP  187 (252)
T ss_dssp             HHHHHHHHHGGGTCCEEEEEESSBCCBTCCSSCB
T ss_pred             HHHHHHHHhcccCcEEEEEecCCCcCcchhhhhh
Confidence            999999999885 999999999999999876543

>d1xu9a_ c.2.1.2 (A:) 11-beta-hydroxysteroid dehydrogenase 1 {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: 11-beta-hydroxysteroid dehydrogenase 1
species: Human (Homo sapiens) [TaxId: 9606]

Probab=100.00  E-value=9e-41  Score=280.80  Aligned_cols=193  Identities=32%  Similarity=0.460  Sum_probs=180.9

Q ss_pred             CCCCEEEEcCCCChHHHHHHHHHHHcCCeEEEEeCCcchHHHHHHHHHhhCCCcEEEEEccCCCHHHHHHHHHHHHhHcC
Q 044010           45 VSGKVVIITGASSGIGEHLAYEYARRGACLALCARREKSLEEVADTAREIGSPDVITIRADVSKVDDCRSLVEETMNHFG  124 (248)
Q Consensus        45 ~~~k~~lVtGg~~gIG~aia~~l~~~G~~V~l~~r~~~~~~~~~~~l~~~~~~~v~~~~~D~~~~~~~~~~~~~~~~~~g  124 (248)
                      ++||++|||||++|||+++|++|+++|++|++++|+++++++..+++.+..+..+..+.+|.++.+.++...+++.+.+|
T Consensus        12 L~GK~alITGassGIG~aiA~~la~~G~~Vil~~r~~~~l~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~g   91 (269)
T d1xu9a_          12 LQGKKVIVTGASKGIGREMAYHLAKMGAHVVVTARSKETLQKVVSHCLELGAASAHYIAGTMEDMTFAEQFVAQAGKLMG   91 (269)
T ss_dssp             GTTCEEEESSCSSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHHTCSEEEEEECCTTCHHHHHHHHHHHHHHHT
T ss_pred             cCCCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHhhhhcccchhhhhhhhhHHHHHHHHHHHHHHhC
Confidence            79999999999999999999999999999999999999999999988877777889999999999999999999999999


Q ss_pred             CccEEEEccccCCcccccccCChHHHHHHHHhhhHHHHHHHHHHhhhhhhcCCeEEEEcCccccccCCCCccchHHHHHH
Q 044010          125 RLDHLVNNAGISSVALFEDIVNITDFKQIMNINFWGSVYTTRFAVPHLRYTKGKIVVLSSAASWLTAPRMSFYNASKAAL  204 (248)
Q Consensus       125 ~id~vv~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~g~iV~isS~~~~~~~~~~~~Y~~sKaal  204 (248)
                      .+|+++||||......+.+ .+.++|++.+++|+.|++.+++.++|.|++.+|+||++||.++..+.|++.+|++||+|+
T Consensus        92 ~~~~li~nag~~~~~~~~~-~~~~~~~~~~~vN~~~~~~~~~~~lp~m~~~~G~ii~isS~~~~~~~p~~~~Y~asKaal  170 (269)
T d1xu9a_          92 GLDMLILNHITNTSLNLFH-DDIHHVRKSMEVNFLSYVVLTVAALPMLKQSNGSIVVVSSLAGKVAYPMVAAYSASKFAL  170 (269)
T ss_dssp             SCSEEEECCCCCCCCCCCC-SCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEEEEGGGTSCCTTCHHHHHHHHHH
T ss_pred             Ccccccccccccccccccc-CCHHHhhhheeeehhhHHHHHHHHHHHHHhcCCcceEeccchhcCCCCCchHHHHHHHHH
Confidence            9999999999887777666 488999999999999999999999999988889999999999999999999999999999


Q ss_pred             HHHHHHHHHHhCC---CeEEEEEecCccccCcccccc
Q 044010          205 VLFFETLRVELGS---DVGVTIVTPGFIESELTQGKF  238 (248)
Q Consensus       205 ~~l~~~la~~~~~---~i~v~~v~pg~v~T~~~~~~~  238 (248)
                      ++|+++|+.|+++   +|+||+|+||+|+|+|.++..
T Consensus       171 ~~~~~~La~El~~~~~~I~V~~v~PG~v~T~~~~~~~  207 (269)
T d1xu9a_         171 DGFFSSIRKEYSVSRVNVSITLCVLGLIDTETAMKAV  207 (269)
T ss_dssp             HHHHHHHHHHHHHHTCCCEEEEEEECCBCCHHHHHHS
T ss_pred             HHHHHHHHHHhhhcCCCEEEEEEecCcCCCcHHHHhc
Confidence            9999999999853   499999999999999976543

>d2a4ka1 c.2.1.2 (A:2-242) beta-keto acyl carrier protein reductase {Thermus thermophilus, TTHB020 [TaxId: 274]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: beta-keto acyl carrier protein reductase
species: Thermus thermophilus, TTHB020 [TaxId: 274]

Probab=100.00  E-value=1.9e-41  Score=280.55  Aligned_cols=189  Identities=32%  Similarity=0.491  Sum_probs=163.9

Q ss_pred             CCCCCEEEEcCCCChHHHHHHHHHHHcCCeEEEEeCCcchHHHHHHHHHhhCCCcEEEEEccCCCHHHHHHHHHHHHhHc
Q 044010           44 DVSGKVVIITGASSGIGEHLAYEYARRGACLALCARREKSLEEVADTAREIGSPDVITIRADVSKVDDCRSLVEETMNHF  123 (248)
Q Consensus        44 ~~~~k~~lVtGg~~gIG~aia~~l~~~G~~V~l~~r~~~~~~~~~~~l~~~~~~~v~~~~~D~~~~~~~~~~~~~~~~~~  123 (248)
                      +++||++|||||++|||+++|++|+++|++|++++|+.+++++..++   .+ .++.++++|++++++++++++++.+++
T Consensus         2 ~l~gK~alItGas~GIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~---~~-~~~~~~~~Dls~~~~i~~~~~~i~~~~   77 (241)
T d2a4ka1           2 RLSGKTILVTGAASGIGRAALDLFAREGASLVAVDREERLLAEAVAA---LE-AEAIAVVADVSDPKAVEAVFAEALEEF   77 (241)
T ss_dssp             TTTTCEEEEESTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHT---CC-SSEEEEECCTTSHHHHHHHHHHHHHHH
T ss_pred             cCCCCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHH---cC-CceEEEEecCCCHHHHHHHHHHHHHHh
Confidence            68999999999999999999999999999999999998766554443   33 478899999999999999999999999


Q ss_pred             CCccEEEEccccCCcccccccCChHHHHHHHHhhhHHHHHHHHHHhhhhhhcCCeEEEEcCccccccCCCCccchHHHHH
Q 044010          124 GRLDHLVNNAGISSVALFEDIVNITDFKQIMNINFWGSVYTTRFAVPHLRYTKGKIVVLSSAASWLTAPRMSFYNASKAA  203 (248)
Q Consensus       124 g~id~vv~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~g~iV~isS~~~~~~~~~~~~Y~~sKaa  203 (248)
                      |++|++|||||...+.++.+ .+.++|++.+++|+.+++.++|.+.|.|. +++.++++||.+. .+.|++..|+++|+|
T Consensus        78 g~iDiLinnAg~~~~~~~~~-~~~~~~~~~~~~n~~~~~~~~k~~~~~~~-~~~~i~~~ss~a~-~~~~~~~~Y~~sK~a  154 (241)
T d2a4ka1          78 GRLHGVAHFAGVAHSALSWN-LPLEAWEKVLRVNLTGSFLVARKAGEVLE-EGGSLVLTGSVAG-LGAFGLAHYAAGKLG  154 (241)
T ss_dssp             SCCCEEEEGGGGTTTTC-----CHHHHHHHHHHHHHHHHHHHHHHHHHCC-TTCEEEEECCCTT-CCHHHHHHHHHCSSH
T ss_pred             CCccEeccccccccccchhh-hhccccccccccccccccccccccccccc-cccceeecccccc-ccccCccccchhhHH
Confidence            99999999999988777766 58899999999999999999999999986 3456666666554 455788999999999


Q ss_pred             HHHHHHHHHHHhCCC-eEEEEEecCccccCccccccc
Q 044010          204 LVLFFETLRVELGSD-VGVTIVTPGFIESELTQGKFL  239 (248)
Q Consensus       204 l~~l~~~la~~~~~~-i~v~~v~pg~v~T~~~~~~~~  239 (248)
                      +++|+++||+|++++ ||||||+||+++|+|......
T Consensus       155 l~~lt~~lA~el~~~gIrvN~I~PG~v~T~~~~~~~~  191 (241)
T d2a4ka1         155 VVGLARTLALELARKGVRVNVLLPGLIQTPMTAGLPP  191 (241)
T ss_dssp             HHHHHHHHHHHHTTTTCEEEEEEECSBCCGGGTTSCH
T ss_pred             HHHHHHHHHHHHhHhCCEEeeeccCcCCCHHHHhhhH
Confidence            999999999999985 999999999999999876543

>d1ulua_ c.2.1.2 (A:) Enoyl-ACP reductase {Thermus thermophilus [TaxId: 274]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Enoyl-ACP reductase
species: Thermus thermophilus [TaxId: 274]

Probab=100.00  E-value=5.2e-41  Score=280.27  Aligned_cols=195  Identities=26%  Similarity=0.338  Sum_probs=163.5

Q ss_pred             cccCCCCCEEEEcCCCC--hHHHHHHHHHHHcCCeEEEEeCCcchHHHHHHHHHhhCCCcEEEEEccCCCHHHHHHHHHH
Q 044010           41 FSEDVSGKVVIITGASS--GIGEHLAYEYARRGACLALCARREKSLEEVADTAREIGSPDVITIRADVSKVDDCRSLVEE  118 (248)
Q Consensus        41 ~~~~~~~k~~lVtGg~~--gIG~aia~~l~~~G~~V~l~~r~~~~~~~~~~~l~~~~~~~v~~~~~D~~~~~~~~~~~~~  118 (248)
                      +..|++||++|||||++  |||+++|++|+++|++|++.+|+++..+.. ++..+.++ +...+++|++|++++++++++
T Consensus         2 ~~~~L~gK~alITGas~~~GIG~aiA~~la~~Ga~V~i~~~~~~~~~~~-~~~~~~~~-~~~~~~~D~~~~~~v~~~~~~   79 (256)
T d1ulua_           2 LTVDLSGKKALVMGVTNQRSLGFAIAAKLKEAGAEVALSYQAERLRPEA-EKLAEALG-GALLFRADVTQDEELDALFAG   79 (256)
T ss_dssp             EEECCTTCEEEEESCCCSSSHHHHHHHHHHHTTCEEEEEESSGGGHHHH-HHHHHHTT-CCEEEECCTTCHHHHHHHHHH
T ss_pred             CCcCCCCCEEEEECCCCCchHHHHHHHHHHHCCCEEEEEeCcHHHHHHH-HHhhhccC-cccccccccCCHHHHHHHHHH
Confidence            34589999999999886  999999999999999999999987654444 44444443 567899999999999999999


Q ss_pred             HHhHcCCccEEEEccccCCccc----ccccCChHHHHHHHHhhhHHHHHHHHHHhhhhhhcCCeEEEEcCccccccCCCC
Q 044010          119 TMNHFGRLDHLVNNAGISSVAL----FEDIVNITDFKQIMNINFWGSVYTTRFAVPHLRYTKGKIVVLSSAASWLTAPRM  194 (248)
Q Consensus       119 ~~~~~g~id~vv~~ag~~~~~~----~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~g~iV~isS~~~~~~~~~~  194 (248)
                      +.+++|++|++|||||......    ..+ .+.++|+..+++|+.+++.++|++.|.|+ ++|+||++||..+..+.+++
T Consensus        80 ~~~~~g~iDilVnnag~~~~~~~~~~~~~-~~~~~~~~~~~vn~~~~~~~~~~~~~~~~-~~G~Iv~isS~~~~~~~~~~  157 (256)
T d1ulua_          80 VKEAFGGLDYLVHAIAFAPREAMEGRYID-TRRQDWLLALEVSAYSLVAVARRAEPLLR-EGGGIVTLTYYASEKVVPKY  157 (256)
T ss_dssp             HHHHHSSEEEEEECCCCCCHHHHSSCGGG-CCHHHHHHHHHHHTHHHHHHHHHHTTTEE-EEEEEEEEECGGGTSBCTTC
T ss_pred             HHHhcCCceEEEeccccccccccccchhh-hhhhhhhHhhhhhHHHHHHHHHHHHHHhc-cCCEEEEEeehHhcCCCCCc
Confidence            9999999999999999875432    233 56789999999999999999999999986 46899999999999999999


Q ss_pred             ccchHHHHHHHHHHHHHHHHhCCC-eEEEEEecCccccCccccccc
Q 044010          195 SFYNASKAALVLFFETLRVELGSD-VGVTIVTPGFIESELTQGKFL  239 (248)
Q Consensus       195 ~~Y~~sKaal~~l~~~la~~~~~~-i~v~~v~pg~v~T~~~~~~~~  239 (248)
                      .+|++||+|+++|++++|.|++++ ||||+|+||+++|++......
T Consensus       158 ~~Y~asKaal~~ltr~lA~ela~~gIrVN~I~PG~i~t~~~~~~~~  203 (256)
T d1ulua_         158 NVMAIAKAALEASVRYLAYELGPKGVRVNAISAGPVRTVAARSIPG  203 (256)
T ss_dssp             HHHHHHHHHHHHHHHHHHHHHGGGTCEEEEEEECCC----------
T ss_pred             hHHHHHHHHHHHHHHHHHHHhcccCCEEeeeccceeeeccccchhh
Confidence            999999999999999999999985 999999999999999876543

>d1g0oa_ c.2.1.2 (A:) 1,3,8-trihydroxynaphtalene reductase (THNR, naphtol reductase) {Rice blast fungus (Magnaporthe grisea) [TaxId: 148305]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: 1,3,8-trihydroxynaphtalene reductase (THNR, naphtol reductase)
species: Rice blast fungus (Magnaporthe grisea) [TaxId: 148305]

Probab=100.00  E-value=1.7e-40  Score=279.46  Aligned_cols=197  Identities=29%  Similarity=0.529  Sum_probs=175.5

Q ss_pred             cccCCCCCEEEEcCCCChHHHHHHHHHHHcCCeEEEEeCCc-chHHHHHHHHHhhCCCcEEEEEccCCCHHHHHHHHHHH
Q 044010           41 FSEDVSGKVVIITGASSGIGEHLAYEYARRGACLALCARRE-KSLEEVADTAREIGSPDVITIRADVSKVDDCRSLVEET  119 (248)
Q Consensus        41 ~~~~~~~k~~lVtGg~~gIG~aia~~l~~~G~~V~l~~r~~-~~~~~~~~~l~~~~~~~v~~~~~D~~~~~~~~~~~~~~  119 (248)
                      .+.+|+||++|||||++|||+++|++|+++|++|++++|+. +.+++..+++++.+. ++.++.+|++|+++++++++++
T Consensus        12 ~~~sL~gK~~lITGas~GIG~aia~~la~~Ga~Vvi~~~~~~~~~~~~~~~~~~~g~-~~~~~~~D~~~~~~v~~~~~~~   90 (272)
T d1g0oa_          12 QSASLEGKVALVTGAGRGIGREMAMELGRRGCKVIVNYANSTESAEEVVAAIKKNGS-DAACVKANVGVVEDIVRMFEEA   90 (272)
T ss_dssp             GGGCCTTCEEEETTTTSHHHHHHHHHHHHTTCEEEEEESSCHHHHHHHHHHHHHTTC-CEEEEECCTTCHHHHHHHHHHH
T ss_pred             CCcCCCCCEEEEeCCCCHHHHHHHHHHHHcCCEEEEEeCCchHHHHHHHHHHHhhCC-ceeeEeCCCCCHHHHHHHHHHH
Confidence            45679999999999999999999999999999999998874 556777788877665 7899999999999999999999


Q ss_pred             HhHcCCccEEEEccccCCcccccccCChHHHHHHHHhhhHHHHHHHHHHhhhhhhcCCeEEEEcCcccc-ccCCCCccch
Q 044010          120 MNHFGRLDHLVNNAGISSVALFEDIVNITDFKQIMNINFWGSVYTTRFAVPHLRYTKGKIVVLSSAASW-LTAPRMSFYN  198 (248)
Q Consensus       120 ~~~~g~id~vv~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~g~iV~isS~~~~-~~~~~~~~Y~  198 (248)
                      .+++|++|++|||+|.....+..+ .+.++|++.+++|+.+++.++|.+.|.|. +.|++++++|..+. .+.+.++.|+
T Consensus        91 ~~~~g~idilV~nag~~~~~~~~~-~~~~~~~~~~~~nl~~~~~~~~~~~~~m~-~~g~~i~i~s~~~~~~~~~~~~~Y~  168 (272)
T d1g0oa_          91 VKIFGKLDIVCSNSGVVSFGHVKD-VTPEEFDRVFTINTRGQFFVAREAYKHLE-IGGRLILMGSITGQAKAVPKHAVYS  168 (272)
T ss_dssp             HHHHSCCCEEEECCCCCCCCCGGG-CCHHHHHHHHHHHTHHHHHHHHHHHHHSC-TTCEEEEECCGGGTCSSCSSCHHHH
T ss_pred             HHHhCCCCccccccccchhhhhhh-hhhhHHHHHhhhccceeeeeccccccccc-cccccccccccccccccccchhhHH
Confidence            999999999999999887777666 57899999999999999999999999997 45788888777654 4567778899


Q ss_pred             HHHHHHHHHHHHHHHHhCCC-eEEEEEecCccccCcccccccc
Q 044010          199 ASKAALVLFFETLRVELGSD-VGVTIVTPGFIESELTQGKFLT  240 (248)
Q Consensus       199 ~sKaal~~l~~~la~~~~~~-i~v~~v~pg~v~T~~~~~~~~~  240 (248)
                      ++|+|+++|+|++|+|++++ ||||+|+||+++|+|.+..+..
T Consensus       169 asKaal~~ltk~lA~e~~~~gIrVN~I~PG~v~T~~~~~~~~~  211 (272)
T d1g0oa_         169 GSKGAIETFARCMAIDMADKKITVNVVAPGGIKTDMYHAVCRE  211 (272)
T ss_dssp             HHHHHHHHHHHHHHHHHGGGTCEEEEEEECCBSSHHHHHHGGG
T ss_pred             HHHHHHHHHHHHHHHHhchhCeEEEEEccCCcCChHHHHHHHh
Confidence            99999999999999999885 9999999999999998766544

>d1snya_ c.2.1.2 (A:) Carbonyl reductase sniffer {Fruit fly (Drosophila melanogaster) [TaxId: 7227]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Carbonyl reductase sniffer
species: Fruit fly (Drosophila melanogaster) [TaxId: 7227]

Probab=100.00  E-value=8.9e-40  Score=271.55  Aligned_cols=189  Identities=22%  Similarity=0.307  Sum_probs=164.9

Q ss_pred             CEEEEcCCCChHHHHHHHHHH---HcCCeEEEEeCCcchHHHHHHHHHhhCCCcEEEEEccCCCHHHHHHHHHHHHh--H
Q 044010           48 KVVIITGASSGIGEHLAYEYA---RRGACLALCARREKSLEEVADTAREIGSPDVITIRADVSKVDDCRSLVEETMN--H  122 (248)
Q Consensus        48 k~~lVtGg~~gIG~aia~~l~---~~G~~V~l~~r~~~~~~~~~~~l~~~~~~~v~~~~~D~~~~~~~~~~~~~~~~--~  122 (248)
                      |++|||||++|||+++|++|+   ++|++|++++|++++++++.+..+ .++ ++.++.||++|+++++++++++.+  +
T Consensus         3 KtilITGas~GIG~a~a~~l~~~a~~g~~V~~~~r~~~~~~~~~~~~~-~~~-~~~~~~~Dvs~~~~v~~~~~~i~~~~~   80 (248)
T d1snya_           3 NSILITGCNRGLGLGLVKALLNLPQPPQHLFTTCRNREQAKELEDLAK-NHS-NIHILEIDLRNFDAYDKLVADIEGVTK   80 (248)
T ss_dssp             SEEEESCCSSHHHHHHHHHHHTSSSCCSEEEEEESCTTSCHHHHHHHH-HCT-TEEEEECCTTCGGGHHHHHHHHHHHHG
T ss_pred             CEEEEeCCCCHHHHHHHHHHHHHHhCCCEEEEEECCHHHHHHHHHHHh-cCC-cEEEEEEEeccHHHHHHHHhhhHHHhh
Confidence            799999999999999999997   479999999999999887765444 343 799999999999999999999854  5


Q ss_pred             cCCccEEEEccccCCcccccccCChHHHHHHHHhhhHHHHHHHHHHhhhhhhc------------CCeEEEEcCccccc-
Q 044010          123 FGRLDHLVNNAGISSVALFEDIVNITDFKQIMNINFWGSVYTTRFAVPHLRYT------------KGKIVVLSSAASWL-  189 (248)
Q Consensus       123 ~g~id~vv~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~------------~g~iV~isS~~~~~-  189 (248)
                      ++++|++|||||+..+....++.+.++|++.+++|+.|++.+++++.|.|++.            +|++|+++|..+.. 
T Consensus        81 ~~~iDiLvnNAg~~~~~~~~~~~~~~~~~~~~~vN~~g~~~~~~~~~p~l~~~~~~~~~~~~~~~~g~ii~i~S~~g~~~  160 (248)
T d1snya_          81 DQGLNVLFNNAGIAPKSARITAVRSQELLDTLQTNTVVPIMLAKACLPLLKKAAKANESQPMGVGRAAIINMSSILGSIQ  160 (248)
T ss_dssp             GGCCSEEEECCCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHHHHTTTSCSSTTTCEEEEECCGGGCST
T ss_pred             cCCcceEEeeccccccCcccccCCHHHHHHHHHhccccHHHHHHHHHHHHHHhhhccccccccccccccccccccccccC
Confidence            78999999999987665544446889999999999999999999999999653            48999999988764 


Q ss_pred             --cCCCCccchHHHHHHHHHHHHHHHHhCCC-eEEEEEecCccccCcccccc
Q 044010          190 --TAPRMSFYNASKAALVLFFETLRVELGSD-VGVTIVTPGFIESELTQGKF  238 (248)
Q Consensus       190 --~~~~~~~Y~~sKaal~~l~~~la~~~~~~-i~v~~v~pg~v~T~~~~~~~  238 (248)
                        +.+++.+|++||+|+.+|+++++.|+++. ||||+|+||+|+|+|.....
T Consensus       161 ~~~~~~~~~Y~aSKaal~~lt~~la~e~~~~gI~vn~v~PG~v~T~m~~~~~  212 (248)
T d1snya_         161 GNTDGGMYAYRTSKSALNAATKSLSVDLYPQRIMCVSLHPGWVKTDMGGSSA  212 (248)
T ss_dssp             TCCSCCCHHHHHHHHHHHHHHHHHHHHHGGGTCEEEEECCCSBCSTTTCTTC
T ss_pred             CCCCCChHHHHHHHHHHHHHHHHHHHHhCCCCeEEEEcCCCcccCCcccccC
Confidence              34567799999999999999999999875 99999999999999987654

>d1wmaa1 c.2.1.2 (A:2-276) Carbonyl reductase/20beta-hydroxysteroid dehydrogenase {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Carbonyl reductase/20beta-hydroxysteroid dehydrogenase
species: Human (Homo sapiens) [TaxId: 9606]

Probab=100.00  E-value=1.4e-40  Score=280.47  Aligned_cols=189  Identities=22%  Similarity=0.287  Sum_probs=167.2

Q ss_pred             CCEEEEcCCCChHHHHHHHHHHHc-CCeEEEEeCCcchHHHHHHHHHhhCCCcEEEEEccCCCHHHHHHHHHHHHhHcCC
Q 044010           47 GKVVIITGASSGIGEHLAYEYARR-GACLALCARREKSLEEVADTAREIGSPDVITIRADVSKVDDCRSLVEETMNHFGR  125 (248)
Q Consensus        47 ~k~~lVtGg~~gIG~aia~~l~~~-G~~V~l~~r~~~~~~~~~~~l~~~~~~~v~~~~~D~~~~~~~~~~~~~~~~~~g~  125 (248)
                      +|++|||||++|||+++|++|+++ |++|++++|+.+++++..+++++.+. ++.++.||++|.++++++++++.+++|+
T Consensus         3 ~rVAlVTGas~GIG~a~A~~la~~~g~~Vi~~~r~~~~~~~~~~~l~~~~~-~~~~~~~Dvs~~~sv~~~~~~~~~~~g~   81 (275)
T d1wmaa1           3 IHVALVTGGNKGIGLAIVRDLCRLFSGDVVLTARDVTRGQAAVQQLQAEGL-SPRFHQLDIDDLQSIRALRDFLRKEYGG   81 (275)
T ss_dssp             CCEEEESSCSSHHHHHHHHHHHHHSSSEEEEEESSHHHHHHHHHHHHHTTC-CCEEEECCTTCHHHHHHHHHHHHHHHSS
T ss_pred             CeEEEECCCCCHHHHHHHHHHHHhCCCEEEEEECCHHHHHHHHHHHHhcCC-cEEEEEEecCCHHHHHHHHHHHHHhcCC
Confidence            356799999999999999999986 89999999999999999999988775 7889999999999999999999999999


Q ss_pred             ccEEEEccccCCcccccccCChHHHHHHHHhhhHHHHHHHHHHhhhhhhcCCeEEEEcCccccccC--------------
Q 044010          126 LDHLVNNAGISSVALFEDIVNITDFKQIMNINFWGSVYTTRFAVPHLRYTKGKIVVLSSAASWLTA--------------  191 (248)
Q Consensus       126 id~vv~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~g~iV~isS~~~~~~~--------------  191 (248)
                      +|++|||||+..+....+ .+.++|++.+++|+.|++.+++.++|.|+ +.|+||++||..+..+.              
T Consensus        82 iDiLVnNAGi~~~~~~~~-~~~~~~~~~~~vN~~g~~~l~~~~lp~m~-~~g~ivnisS~~~~~~~~~~~~y~~~k~~~~  159 (275)
T d1wmaa1          82 LDVLVNNAGIAFKVADPT-PFHIQAEVTMKTNFFGTRDVCTELLPLIK-PQGRVVNVSSIMSVRALKSCSPELQQKFRSE  159 (275)
T ss_dssp             EEEEEECCCCCCCTTCCS-CHHHHHHHHHHHHTHHHHHHHHHHGGGEE-EEEEEEEECCHHHHHHHHTSCHHHHHHHHCS
T ss_pred             cEEEEEcCCcCCCCCccc-CCHHHHHHHHHHHHHHHHHHHHHHHHHHH-hcCCcccccccceeccccccchhhhhhhccc
Confidence            999999999987766665 35689999999999999999999999996 46899999997764321              


Q ss_pred             ---------------------------CCCccchHHHHHHHHHHHHHHHHhC-----CCeEEEEEecCccccCcccccc
Q 044010          192 ---------------------------PRMSFYNASKAALVLFFETLRVELG-----SDVGVTIVTPGFIESELTQGKF  238 (248)
Q Consensus       192 ---------------------------~~~~~Y~~sKaal~~l~~~la~~~~-----~~i~v~~v~pg~v~T~~~~~~~  238 (248)
                                                 .+..+|++||+++..|++.++++++     ++|+||+|+||+|+|+|.++..
T Consensus       160 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~aY~~sK~a~~~~t~~la~~l~~~~~~~~I~vn~v~PG~v~T~m~~~~~  238 (275)
T d1wmaa1         160 TITEEELVGLMNKFVEDTKKGVHQKEGWPSSAYGVTKIGVTVLSRIHARKLSEQRKGDKILLNACCPGWVRTDMAGPKA  238 (275)
T ss_dssp             SCCHHHHHHHHHHHHHHHHTTCTTTTTCCSCHHHHHHHHHHHHHHHHHHHHHHHCTTSCCEEEEEECCSBCSTTTCTTC
T ss_pred             ccchhhhccccccchhcccccccccCCCchHHHHHHHHHHHHHHHHHHHHHHHHhCCCCeEEEEEecccccCCcccCcc
Confidence                                       1235699999999999999999984     2599999999999999987653

>d1o5ia_ c.2.1.2 (A:) beta-keto acyl carrier protein reductase {Thermotoga maritima [TaxId: 2336]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: beta-keto acyl carrier protein reductase
species: Thermotoga maritima [TaxId: 2336]

Probab=100.00  E-value=2e-40  Score=273.25  Aligned_cols=179  Identities=26%  Similarity=0.399  Sum_probs=157.9

Q ss_pred             CCCCEEEEcCCCChHHHHHHHHHHHcCCeEEEEeCCcchHHHHHHHHHhhCCCcEEEEEccCCCHHHHHHHHHHHHhHcC
Q 044010           45 VSGKVVIITGASSGIGEHLAYEYARRGACLALCARREKSLEEVADTAREIGSPDVITIRADVSKVDDCRSLVEETMNHFG  124 (248)
Q Consensus        45 ~~~k~~lVtGg~~gIG~aia~~l~~~G~~V~l~~r~~~~~~~~~~~l~~~~~~~v~~~~~D~~~~~~~~~~~~~~~~~~g  124 (248)
                      ++||++|||||++|||+++|++|+++|++|++++|+++.+++       .   ...++.||+++.      ++.+.+++|
T Consensus         2 LkgK~~lVTGas~GIG~aia~~l~~~Ga~V~~~~r~~~~l~~-------~---~~~~~~~Dv~~~------~~~~~~~~g   65 (234)
T d1o5ia_           2 IRDKGVLVLAASRGIGRAVADVLSQEGAEVTICARNEELLKR-------S---GHRYVVCDLRKD------LDLLFEKVK   65 (234)
T ss_dssp             CTTCEEEEESCSSHHHHHHHHHHHHTTCEEEEEESCHHHHHH-------T---CSEEEECCTTTC------HHHHHHHSC
T ss_pred             CCCCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEECCHHHHHh-------c---CCcEEEcchHHH------HHHHHHHhC
Confidence            789999999999999999999999999999999998754332       2   235678999864      445667889


Q ss_pred             CccEEEEccccCCcccccccCChHHHHHHHHhhhHHHHHHHHHHhhhhhhcC-CeEEEEcCccccccCCCCccchHHHHH
Q 044010          125 RLDHLVNNAGISSVALFEDIVNITDFKQIMNINFWGSVYTTRFAVPHLRYTK-GKIVVLSSAASWLTAPRMSFYNASKAA  203 (248)
Q Consensus       125 ~id~vv~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~-g~iV~isS~~~~~~~~~~~~Y~~sKaa  203 (248)
                      ++|++|||||.....++.+ .+.++|++.+++|+.+++.++|++.|.|++++ |+||+++|..+..+.+....|++||+|
T Consensus        66 ~iD~lVnnAG~~~~~~~~~-~~~~~~~~~~~~n~~~~~~~~~~~~~~m~~~~~G~ii~i~S~~~~~~~~~~~~Y~asKaa  144 (234)
T d1o5ia_          66 EVDILVLNAGGPKAGFFDE-LTNEDFKEAIDSLFLNMIKIVRNYLPAMKEKGWGRIVAITSFSVISPIENLYTSNSARMA  144 (234)
T ss_dssp             CCSEEEECCCCCCCBCGGG-CCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEEECCGGGTSCCTTBHHHHHHHHH
T ss_pred             CCcEEEecccccCCcchhh-hhhHHHHHHhhhhhhhhhhhhhcccccccccccccccccccccccccccccccchhHHHH
Confidence            9999999999887776666 58899999999999999999999999997554 899999999999999999999999999


Q ss_pred             HHHHHHHHHHHhCCC-eEEEEEecCccccCcccccccc
Q 044010          204 LVLFFETLRVELGSD-VGVTIVTPGFIESELTQGKFLT  240 (248)
Q Consensus       204 l~~l~~~la~~~~~~-i~v~~v~pg~v~T~~~~~~~~~  240 (248)
                      +++|++++|+|++++ ||||+|+||+++|+|.++...+
T Consensus       145 l~~ltk~lA~ela~~gIrVN~I~PG~v~T~~~~~~~~~  182 (234)
T d1o5ia_         145 LTGFLKTLSFEVAPYGITVNCVAPGWTETERVKELLSE  182 (234)
T ss_dssp             HHHHHHHHHHHHGGGTEEEEEEEECSBCCTTHHHHSCH
T ss_pred             HHHHHHHHHHHhcccCeEEeecccCccchhhhhhhcCH
Confidence            999999999999885 9999999999999998776544

>d1w6ua_ c.2.1.2 (A:) 2,4-dienoyl-CoA reductase, mitochondrial (DECR) {Human (Homo sapiens), [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: 2,4-dienoyl-CoA reductase, mitochondrial (DECR)
species: Human (Homo sapiens), [TaxId: 9606]

Probab=100.00  E-value=1e-39  Score=277.49  Aligned_cols=196  Identities=20%  Similarity=0.259  Sum_probs=173.9

Q ss_pred             cCCCCCEEEEcCCCChHHHHHHHHHHHcCCeEEEEeCCcchHHHHHHHHHhhCCCcEEEEEccCCCHHHHHHHHHHHHhH
Q 044010           43 EDVSGKVVIITGASSGIGEHLAYEYARRGACLALCARREKSLEEVADTAREIGSPDVITIRADVSKVDDCRSLVEETMNH  122 (248)
Q Consensus        43 ~~~~~k~~lVtGg~~gIG~aia~~l~~~G~~V~l~~r~~~~~~~~~~~l~~~~~~~v~~~~~D~~~~~~~~~~~~~~~~~  122 (248)
                      .+++||++|||||++|||+++|++|+++|++|++++|+.+++++..+++.+..+.++.++.+|+++.++++++++.+.++
T Consensus        21 ~~l~gK~alITGas~GIG~aiA~~la~~Ga~Vii~~r~~~~l~~~~~~l~~~~g~~~~~~~~D~~~~~~v~~~~~~~~~~  100 (294)
T d1w6ua_          21 NSFQGKVAFITGGGTGLGKGMTTLLSSLGAQCVIASRKMDVLKATAEQISSQTGNKVHAIQCDVRDPDMVQNTVSELIKV  100 (294)
T ss_dssp             TTTTTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHHHSSCEEEEECCTTCHHHHHHHHHHHHHH
T ss_pred             CCCCCCEEEEeCCCCHHHHHHHHHHHHcCCEEEEEECCHHHHHHHHHHHHHhcCCceEEEEecccChHHHHHHhhhhhhh
Confidence            38999999999999999999999999999999999999999999998887776668899999999999999999999999


Q ss_pred             cCCccEEEEccccCCcccccccCChHHHHHHHHhhhHHHHHHHHHHhhhhhh--cCCeEEEEcCccccccCCCCccchHH
Q 044010          123 FGRLDHLVNNAGISSVALFEDIVNITDFKQIMNINFWGSVYTTRFAVPHLRY--TKGKIVVLSSAASWLTAPRMSFYNAS  200 (248)
Q Consensus       123 ~g~id~vv~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~--~~g~iV~isS~~~~~~~~~~~~Y~~s  200 (248)
                      ++++|++|||||.....+..+ .+.+++++.+.+|..+.+.+.+...+.+..  .++.+++++|..+..+.++..+|++|
T Consensus       101 ~g~iDilvnnAg~~~~~~~~~-~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~~~i~~~ss~~~~~~~~~~~~Ysas  179 (294)
T d1w6ua_         101 AGHPNIVINNAAGNFISPTER-LSPNAWKTITDIVLNGTAFVTLEIGKQLIKAQKGAAFLSITTIYAETGSGFVVPSASA  179 (294)
T ss_dssp             TCSCSEEEECCCCCCCSCGGG-CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHTTCCEEEEEECCTHHHHCCTTCHHHHHH
T ss_pred             ccccchhhhhhhhcccccccc-chhhhhhhheeeecccchhhhhhhhcccccccccccccccccchhhhcccccchHHHH
Confidence            999999999999887776666 477999999999999999999988877543  34788889999999999999999999


Q ss_pred             HHHHHHHHHHHHHHhCCC-eEEEEEecCccccCccccccc
Q 044010          201 KAALVLFFETLRVELGSD-VGVTIVTPGFIESELTQGKFL  239 (248)
Q Consensus       201 Kaal~~l~~~la~~~~~~-i~v~~v~pg~v~T~~~~~~~~  239 (248)
                      |+|+++|+|++|+|++++ ||||+|+||+|+|++......
T Consensus       180 Kaal~~ltk~lA~ela~~gIrVN~I~PG~i~T~~~~~~~~  219 (294)
T d1w6ua_         180 KAGVEAMSKSLAAEWGKYGMRFNVIQPGPIKTKGAFSRLD  219 (294)
T ss_dssp             HHHHHHHHHHHHHHHGGGTEEEEEEEECCBCC------CC
T ss_pred             HHHHHHHHHHHHHHHhHhCeEEEEEccCccccchhhhccC
Confidence            999999999999999985 999999999999999876544

>d1jtva_ c.2.1.2 (A:) Human estrogenic 17beta-hydroxysteroid dehydrogenase {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Human estrogenic 17beta-hydroxysteroid dehydrogenase
species: Human (Homo sapiens) [TaxId: 9606]

Probab=100.00  E-value=4.4e-40  Score=278.67  Aligned_cols=191  Identities=27%  Similarity=0.344  Sum_probs=160.3

Q ss_pred             CCCEEEEcCCCChHHHHHHHHHHHcCCeEE---EEeCCcchHHHHHHHHHhh--CCCcEEEEEccCCCHHHHHHHHHHHH
Q 044010           46 SGKVVIITGASSGIGEHLAYEYARRGACLA---LCARREKSLEEVADTAREI--GSPDVITIRADVSKVDDCRSLVEETM  120 (248)
Q Consensus        46 ~~k~~lVtGg~~gIG~aia~~l~~~G~~V~---l~~r~~~~~~~~~~~l~~~--~~~~v~~~~~D~~~~~~~~~~~~~~~  120 (248)
                      +.|++|||||++|||+++|++|+++|++|+   .+.|+.+..++..+..++.  .+.++..+.||++|.++++++++++.
T Consensus         1 ~kkVvlITGassGIG~a~A~~la~~Ga~v~~v~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~Dv~~~~~~~~~~~~~~   80 (285)
T d1jtva_           1 ARTVVLITGCSSGIGLHLAVRLASDPSQSFKVYATLRDLKTQGRLWEAARALACPPGSLETLQLDVRDSKSVAAARERVT   80 (285)
T ss_dssp             CCEEEEESCCSSHHHHHHHHHHHTCTTCCEEEEEEESCGGGTHHHHHHHHHTTCCTTSEEEEECCTTCHHHHHHHHHTCT
T ss_pred             CCCEEEEccCCCHHHHHHHHHHHHCCCCeEEEEEecCChhhhHHHHHHHHHHhccCCceEEEeccccchHhhhhhhhhcc
Confidence            368899999999999999999999998754   4456655555544444432  23489999999999999999999874


Q ss_pred             hHcCCccEEEEccccCCcccccccCChHHHHHHHHhhhHHHHHHHHHHhhhhhhcC-CeEEEEcCccccccCCCCccchH
Q 044010          121 NHFGRLDHLVNNAGISSVALFEDIVNITDFKQIMNINFWGSVYTTRFAVPHLRYTK-GKIVVLSSAASWLTAPRMSFYNA  199 (248)
Q Consensus       121 ~~~g~id~vv~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~-g~iV~isS~~~~~~~~~~~~Y~~  199 (248)
                      +  |.+|++|||+|.....+..+ .+.++|++.+++|+.|+++++|+++|.|.+++ |+||++||.++..+.|+.++|++
T Consensus        81 ~--g~idilvnnag~~~~~~~~~-~~~e~~~~~~~vN~~g~~~~~~~~lp~m~~~~~G~Iv~isS~~g~~~~~~~~~Y~a  157 (285)
T d1jtva_          81 E--GRVDVLVCNAGLGLLGPLEA-LGEDAVASVLDVNVVGTVRMLQAFLPDMKRRGSGRVLVTGSVGGLMGLPFNDVYCA  157 (285)
T ss_dssp             T--SCCSEEEECCCCCCCSCGGG-SCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEEEEEGGGTSCCTTCHHHHH
T ss_pred             c--cchhhhhhcccccccccccc-hhHhhhhhhhhcchhHHHHHHHHHHHHHHHcCCCceEEEechhhcCCCCCchHHHH
Confidence            3  89999999999988777766 57899999999999999999999999997655 99999999999999999999999


Q ss_pred             HHHHHHHHHHHHHHHhCCC-eEEEEEecCccccCccccccc
Q 044010          200 SKAALVLFFETLRVELGSD-VGVTIVTPGFIESELTQGKFL  239 (248)
Q Consensus       200 sKaal~~l~~~la~~~~~~-i~v~~v~pg~v~T~~~~~~~~  239 (248)
                      ||+|+++|+++|+.|+++. ||||+|+||+|+|+|.++...
T Consensus       158 sKaal~~l~~~la~El~~~gIrVn~V~PG~v~T~~~~~~~~  198 (285)
T d1jtva_         158 SKFALEGLCESLAVLLLPFGVHLSLIECGPVHTAFMEKVLG  198 (285)
T ss_dssp             HHHHHHHHHHHHHHHHGGGTEEEEEEEECCBCC-------C
T ss_pred             HHHHHHHHHHHHHHHhhccCcEEEEEecCCCCChHHHHhcc
Confidence            9999999999999999885 999999999999999876643

>d2ag5a1 c.2.1.2 (A:1-245) Dehydrogenase/reductase SDR family member 6, DHRS6 {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Dehydrogenase/reductase SDR family member 6, DHRS6
species: Human (Homo sapiens) [TaxId: 9606]

Probab=100.00  E-value=4e-39  Score=267.16  Aligned_cols=185  Identities=27%  Similarity=0.368  Sum_probs=160.5

Q ss_pred             CCCCCEEEEcCCCChHHHHHHHHHHHcCCeEEEEeCCcchHHHHHHHHHhhCCCcEEEEEccCCCHHHHHHHHHHHHhHc
Q 044010           44 DVSGKVVIITGASSGIGEHLAYEYARRGACLALCARREKSLEEVADTAREIGSPDVITIRADVSKVDDCRSLVEETMNHF  123 (248)
Q Consensus        44 ~~~~k~~lVtGg~~gIG~aia~~l~~~G~~V~l~~r~~~~~~~~~~~l~~~~~~~v~~~~~D~~~~~~~~~~~~~~~~~~  123 (248)
                      +++||++|||||++|||+++|+.|+++|++|++++|+++++++    +.+..  .+....+|+.+.+.++...    +.+
T Consensus         3 ~l~gK~alITGas~GIG~aia~~la~~G~~Vi~~~r~~~~l~~----~~~~~--~~~~~~~d~~~~~~~~~~~----~~~   72 (245)
T d2ag5a1           3 RLDGKVIILTAAAQGIGQAAALAFAREGAKVIATDINESKLQE----LEKYP--GIQTRVLDVTKKKQIDQFA----NEV   72 (245)
T ss_dssp             TTTTCEEEESSTTSHHHHHHHHHHHHTTCEEEEEESCHHHHGG----GGGST--TEEEEECCTTCHHHHHHHH----HHC
T ss_pred             CCCCCEEEEeCCCCHHHHHHHHHHHHcCCEEEEEeCCHHHHHH----HHhcc--CCceeeeeccccccccccc----ccc
Confidence            5999999999999999999999999999999999999765544    33333  4778889998877665554    566


Q ss_pred             CCccEEEEccccCCcccccccCChHHHHHHHHhhhHHHHHHHHHHhhhhhhcC-CeEEEEcCcccc-ccCCCCccchHHH
Q 044010          124 GRLDHLVNNAGISSVALFEDIVNITDFKQIMNINFWGSVYTTRFAVPHLRYTK-GKIVVLSSAASW-LTAPRMSFYNASK  201 (248)
Q Consensus       124 g~id~vv~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~-g~iV~isS~~~~-~~~~~~~~Y~~sK  201 (248)
                      +++|++|||||...+.++.+ .+.++|+..+++|+.+++.++|.+.|.|.+++ |+||++||..+. .+.+.+.+|+++|
T Consensus        73 ~~id~lVn~ag~~~~~~~~~-~~~~~~~~~~~vn~~~~~~~~~~~~~~~~~~~~g~Ii~isS~~~~~~~~~~~~~Y~~sK  151 (245)
T d2ag5a1          73 ERLDVLFNVAGFVHHGTVLD-CEEKDWDFSMNLNVRSMYLMIKAFLPKMLAQKSGNIINMSSVASSVKGVVNRCVYSTTK  151 (245)
T ss_dssp             SCCSEEEECCCCCCCBCGGG-CCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEEECCSBTTTBCCTTBHHHHHHH
T ss_pred             ccceeEEecccccCCCChhh-CCHHHHHHHHHHhhccchhHHHhhCcccccCCCceeeeeechhhccCCccchhHHHHHH
Confidence            89999999999988877776 58899999999999999999999999987554 899999998774 5778889999999


Q ss_pred             HHHHHHHHHHHHHhCCC-eEEEEEecCccccCccccccc
Q 044010          202 AALVLFFETLRVELGSD-VGVTIVTPGFIESELTQGKFL  239 (248)
Q Consensus       202 aal~~l~~~la~~~~~~-i~v~~v~pg~v~T~~~~~~~~  239 (248)
                      +|+++|+|++|.|++++ ||||+|+||+++|+|.+....
T Consensus       152 aal~~l~r~lA~e~~~~gIrvN~I~PG~i~T~~~~~~~~  190 (245)
T d2ag5a1         152 AAVIGLTKSVAADFIQQGIRCNCVCPGTVDTPSLQERIQ  190 (245)
T ss_dssp             HHHHHHHHHHHHHHGGGTEEEEEEEESCEECHHHHHHHH
T ss_pred             HHHHHHHHHHHHHhhhhCcEEEEEeeceeechhhHhhhh
Confidence            99999999999999985 999999999999999875433

>d1yo6a1 c.2.1.2 (A:1-250) Putative carbonyl reductase sniffer {Caenorhabditis elegans [TaxId: 6239]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Putative carbonyl reductase sniffer
species: Caenorhabditis elegans [TaxId: 6239]

Probab=100.00  E-value=3.4e-38  Score=262.21  Aligned_cols=189  Identities=25%  Similarity=0.313  Sum_probs=154.7

Q ss_pred             CCCCEEEEcCCCChHHHHHHHHHHHcCC--eEEEEeCCcchHHHHHHHHHhhCCCcEEEEEccCCCHHHHHHHHHHHHhH
Q 044010           45 VSGKVVIITGASSGIGEHLAYEYARRGA--CLALCARREKSLEEVADTAREIGSPDVITIRADVSKVDDCRSLVEETMNH  122 (248)
Q Consensus        45 ~~~k~~lVtGg~~gIG~aia~~l~~~G~--~V~l~~r~~~~~~~~~~~l~~~~~~~v~~~~~D~~~~~~~~~~~~~~~~~  122 (248)
                      |+.|++|||||++|||+++|++|+++|+  +|++++|+.+++++.    ++..+.++.++.+|++|.++++++++++.+.
T Consensus         1 M~~KtilITGassGIG~a~a~~la~~G~~~~Vi~~~R~~~~~~~l----~~~~~~~~~~~~~Dvs~~~~v~~~~~~i~~~   76 (250)
T d1yo6a1           1 MSPGSVVVTGANRGIGLGLVQQLVKDKNIRHIIATARDVEKATEL----KSIKDSRVHVLPLTVTCDKSLDTFVSKVGEI   76 (250)
T ss_dssp             CCCSEEEESSCSSHHHHHHHHHHHTCTTCCEEEEEESSGGGCHHH----HTCCCTTEEEEECCTTCHHHHHHHHHHHHHH
T ss_pred             CcCCEEEEeCCCCHHHHHHHHHHHHCCCCCEEEEEeCCHHHHHHH----HHhhCCceEEEEEecCCHHHHHHHHHHHHHH
Confidence            5679999999999999999999999996  789999999877653    4445558999999999999999999999998


Q ss_pred             cC--CccEEEEccccCCcccccccCChHHHHHHHHhhhHHHHHHHHHHhhhhhhc------------CCeEEEEcCcccc
Q 044010          123 FG--RLDHLVNNAGISSVALFEDIVNITDFKQIMNINFWGSVYTTRFAVPHLRYT------------KGKIVVLSSAASW  188 (248)
Q Consensus       123 ~g--~id~vv~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~------------~g~iV~isS~~~~  188 (248)
                      ++  ++|++|||||...+.....+.+.++|++.+++|+.|++.+++.++|.|++.            .+++++++|..+.
T Consensus        77 ~~~~~idilinnAG~~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~p~l~~~~~~~~~~~~~~~~~~~i~~s~~~~~  156 (250)
T d1yo6a1          77 VGSDGLSLLINNAGVLLSYGTNTEPNRAVIAEQLDVNTTSVVLLTQKLLPLLKNAASKESGDQLSVSRAAVITISSGLGS  156 (250)
T ss_dssp             HGGGCCCEEEECCCCCCCBCTTSCCCHHHHHHHHHHHTHHHHHHHHHTHHHHHHHHHSSCSSCCCTTTCEEEEECCGGGC
T ss_pred             hCCCCeEEEEEcCcccCCCCccccCCHHHHHHHHHHHhhhHHHHHHHHHHHHHHhccCCCCccccceecccccccccccc
Confidence            76  499999999987653333346789999999999999999999999999643            2689999887655


Q ss_pred             ccC-------CCCccchHHHHHHHHHHHHHHHHhCCC-eEEEEEecCccccCccccc
Q 044010          189 LTA-------PRMSFYNASKAALVLFFETLRVELGSD-VGVTIVTPGFIESELTQGK  237 (248)
Q Consensus       189 ~~~-------~~~~~Y~~sKaal~~l~~~la~~~~~~-i~v~~v~pg~v~T~~~~~~  237 (248)
                      ...       .+..+|++||+|+.+|+++++.|+++. |+||+|+||+|+|+|..+.
T Consensus       157 ~~~~~~~~~~~~~~aY~aSKaal~~l~~~la~el~~~gI~v~~i~PG~v~T~m~~~~  213 (250)
T d1yo6a1         157 ITDNTSGSAQFPVLAYRMSKAAINMFGRTLAVDLKDDNVLVVNFCPGWVQTNLGGKN  213 (250)
T ss_dssp             STTCCSTTSSSCBHHHHHHHHHHHHHHHHHHHHTGGGTCEEEEEECCCC--------
T ss_pred             ccCCcccccchhHHHHHHHHHHHHHHHHHHHHHhcccCeEEEEEecCCCCCCCCCCC
Confidence            432       234579999999999999999999875 9999999999999997643

>d2o23a1 c.2.1.2 (A:6-253) Type II 3-hydroxyacyl-CoA dehydrogenase {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Type II 3-hydroxyacyl-CoA dehydrogenase
species: Human (Homo sapiens) [TaxId: 9606]

Probab=100.00  E-value=1.1e-37  Score=258.69  Aligned_cols=192  Identities=24%  Similarity=0.349  Sum_probs=166.9

Q ss_pred             CCCCCEEEEcCCCChHHHHHHHHHHHcCCeEEEEeCCcchHHHHHHHHHhhCCCcEEEEEccCCCHHHHHHHHHHHHhHc
Q 044010           44 DVSGKVVIITGASSGIGEHLAYEYARRGACLALCARREKSLEEVADTAREIGSPDVITIRADVSKVDDCRSLVEETMNHF  123 (248)
Q Consensus        44 ~~~~k~~lVtGg~~gIG~aia~~l~~~G~~V~l~~r~~~~~~~~~~~l~~~~~~~v~~~~~D~~~~~~~~~~~~~~~~~~  123 (248)
                      +++||++|||||++|||+++|++|+++|++|++++|+.+++++..+++.    .......+|+.+.+.+++..+++....
T Consensus         2 slkGKvalITGas~GIG~aia~~la~~G~~V~~~~r~~~~~~~~~~~l~----~~~~~~~~~~~~~~~~~~~~~~~~~~~   77 (248)
T d2o23a1           2 SVKGLVAVITGGASGLGLATAERLVGQGASAVLLDLPNSGGEAQAKKLG----NNCVFAPADVTSEKDVQTALALAKGKF   77 (248)
T ss_dssp             CCTTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEECTTSSHHHHHHHHC----TTEEEEECCTTCHHHHHHHHHHHHHHH
T ss_pred             CCCCCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEeCChHHHHHHHHHhC----CCccccccccccccccccccccccccc
Confidence            6899999999999999999999999999999999999999888777763    367889999999999999999999999


Q ss_pred             CCccEEEEccccCCcccc-----cccCChHHHHHHHHhhhHHHHHHHHHHhhhhhh-------cCCeEEEEcCccccccC
Q 044010          124 GRLDHLVNNAGISSVALF-----EDIVNITDFKQIMNINFWGSVYTTRFAVPHLRY-------TKGKIVVLSSAASWLTA  191 (248)
Q Consensus       124 g~id~vv~~ag~~~~~~~-----~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~-------~~g~iV~isS~~~~~~~  191 (248)
                      +.+|.+++|++.......     ..+.+.++|++.+++|+.++++++|++.|.|.+       .+|+||++||..+..+.
T Consensus        78 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~vnl~~~~~~~~~~~~~~~~~~~~~~~~~G~Ii~isS~~~~~~~  157 (248)
T d2o23a1          78 GRVDVAVNCAGIAVASKTYNLKKGQTHTLEDFQRVLDVNLMGTFNVIRLVAGEMGQNEPDQGGQRGVIINTASVAAFEGQ  157 (248)
T ss_dssp             SCCCEEEECCCCCCCCCSEETTTTEECCHHHHHHHHHHHTHHHHHHHHHHHHHHTTSCCCTTSCCEEEEEECCTHHHHCC
T ss_pred             ccccccccccccccCCCcccccccccchHHHHHHHHhHHHHHHHHHHHHhHHHHHHhhhhccCCceEEEEecchhhccCC
Confidence            999999999887654322     223467899999999999999999999998743       24899999999999999


Q ss_pred             CCCccchHHHHHHHHHHHHHHHHhCCC-eEEEEEecCccccCccccccc
Q 044010          192 PRMSFYNASKAALVLFFETLRVELGSD-VGVTIVTPGFIESELTQGKFL  239 (248)
Q Consensus       192 ~~~~~Y~~sKaal~~l~~~la~~~~~~-i~v~~v~pg~v~T~~~~~~~~  239 (248)
                      +++++|++||+|+++|++++++|++++ ||||+|+||+++|+|......
T Consensus       158 ~~~~~Y~asKaal~~lt~~la~e~~~~gIrvN~I~PG~i~T~~~~~~~~  206 (248)
T d2o23a1         158 VGQAAYSASKGGIVGMTLPIARDLAPIGIRVMTIAPGLFGTPLLTSLPE  206 (248)
T ss_dssp             TTCHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECCBCCC-------
T ss_pred             CCchHHHHHHHHHHHHHHHHHHHhcccCcceeeeccCceecchhhcCCH
Confidence            999999999999999999999999985 999999999999999876543

>d1dhra_ c.2.1.2 (A:) Dihydropteridin reductase (pteridine reductase) {Rat (Rattus norvegicus) [TaxId: 10116]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Dihydropteridin reductase (pteridine reductase)
species: Rat (Rattus norvegicus) [TaxId: 10116]

Probab=100.00  E-value=3.1e-37  Score=254.39  Aligned_cols=185  Identities=15%  Similarity=0.219  Sum_probs=160.5

Q ss_pred             CCCEEEEcCCCChHHHHHHHHHHHcCCeEEEEeCCcchHHHHHHHHHhhCCCcEEEEEccCCCHHHHHHHHHHHHhHcC-
Q 044010           46 SGKVVIITGASSGIGEHLAYEYARRGACLALCARREKSLEEVADTAREIGSPDVITIRADVSKVDDCRSLVEETMNHFG-  124 (248)
Q Consensus        46 ~~k~~lVtGg~~gIG~aia~~l~~~G~~V~l~~r~~~~~~~~~~~l~~~~~~~v~~~~~D~~~~~~~~~~~~~~~~~~g-  124 (248)
                      +||++|||||++|||+++|++|+++|++|++++++..+.           ........+|..+.++.+.+.+++.+.++ 
T Consensus         1 egK~vlITGas~GIG~a~a~~l~~~G~~V~~~~~~~~~~-----------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   69 (236)
T d1dhra_           1 EARRVLVYGGRGALGSRCVQAFRARNWWVASIDVVENEE-----------ASASVIVKMTDSFTEQADQVTAEVGKLLGD   69 (236)
T ss_dssp             CCCEEEEETTTSHHHHHHHHHHHTTTCEEEEEESSCCTT-----------SSEEEECCCCSCHHHHHHHHHHHHHHHHTT
T ss_pred             CCCEEEEECCCCHHHHHHHHHHHHCCCEEEEEeCCcccc-----------ccccceeecccCcHHHHHHHHHHHHHHhCC
Confidence            589999999999999999999999999999999976431           12445677888889999988888877754 


Q ss_pred             -CccEEEEccccCCcccccccCChHHHHHHHHhhhHHHHHHHHHHhhhhhhcCCeEEEEcCccccccCCCCccchHHHHH
Q 044010          125 -RLDHLVNNAGISSVALFEDIVNITDFKQIMNINFWGSVYTTRFAVPHLRYTKGKIVVLSSAASWLTAPRMSFYNASKAA  203 (248)
Q Consensus       125 -~id~vv~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~g~iV~isS~~~~~~~~~~~~Y~~sKaa  203 (248)
                       ++|++|||||........+..+.++|++.+++|+.+++++.+.+.|+|+ ++|+||++||.++..+.+++.+|++||+|
T Consensus        70 ~~iD~lInnAG~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~m~-~~G~Iv~isS~~~~~~~~~~~~Y~asKaa  148 (236)
T d1dhra_          70 QKVDAILCVAGGWAGGNAKSKSLFKNCDLMWKQSIWTSTISSHLATKHLK-EGGLLTLAGAKAALDGTPGMIGYGMAKGA  148 (236)
T ss_dssp             CCEEEEEECCCCCCCBCTTCTTHHHHHHHHHHHHHHHHHHHHHHHHHHEE-EEEEEEEECCGGGGSCCTTBHHHHHHHHH
T ss_pred             CCceEEEECCcccccccchhcCCHHHHHHHHHHcchHHHHHHHHHHHhcc-cccceeEEccHHHcCCccCCcccHHHHHH
Confidence             6999999999765554444456789999999999999999999999996 46999999999999999999999999999


Q ss_pred             HHHHHHHHHHHhC--C-CeEEEEEecCccccCcccccccccc
Q 044010          204 LVLFFETLRVELG--S-DVGVTIVTPGFIESELTQGKFLTGR  242 (248)
Q Consensus       204 l~~l~~~la~~~~--~-~i~v~~v~pg~v~T~~~~~~~~~~~  242 (248)
                      +++|+++|+.|++  + +||||+|+||+++|+|.+....+.+
T Consensus       149 l~~lt~~la~El~~~~~gI~vn~v~PG~v~T~~~~~~~~~~~  190 (236)
T d1dhra_         149 VHQLCQSLAGKNSGMPSGAAAIAVLPVTLDTPMNRKSMPEAD  190 (236)
T ss_dssp             HHHHHHHHTSTTSSCCTTCEEEEEEESCEECHHHHHHSTTSC
T ss_pred             HHHHHHHHHHHhccCCCcEEEEEEEeccCcCCcchhhCccch
Confidence            9999999999997  3 5999999999999999877655443

>d1ooea_ c.2.1.2 (A:) Dihydropteridin reductase (pteridine reductase) {Nematode (Caenorhabditis elegans) [TaxId: 6239]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Dihydropteridin reductase (pteridine reductase)
species: Nematode (Caenorhabditis elegans) [TaxId: 6239]

Probab=100.00  E-value=7.1e-36  Score=245.94  Aligned_cols=183  Identities=16%  Similarity=0.217  Sum_probs=156.9

Q ss_pred             CCEEEEcCCCChHHHHHHHHHHHcCCeEEEEeCCcchHHHHHHHHHhhCCCcEEEEEccCCCHHHHHHHHHHHHhH--cC
Q 044010           47 GKVVIITGASSGIGEHLAYEYARRGACLALCARREKSLEEVADTAREIGSPDVITIRADVSKVDDCRSLVEETMNH--FG  124 (248)
Q Consensus        47 ~k~~lVtGg~~gIG~aia~~l~~~G~~V~l~~r~~~~~~~~~~~l~~~~~~~v~~~~~D~~~~~~~~~~~~~~~~~--~g  124 (248)
                      ++++|||||++|||+++|++|+++|++|++++|++++..           .......+|+.+.+......+.+.+.  +|
T Consensus         2 ~gkVlITGas~GIG~aia~~l~~~G~~V~~~~~~~~~~~-----------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g   70 (235)
T d1ooea_           2 SGKVIVYGGKGALGSAILEFFKKNGYTVLNIDLSANDQA-----------DSNILVDGNKNWTEQEQSILEQTASSLQGS   70 (235)
T ss_dssp             CEEEEEETTTSHHHHHHHHHHHHTTEEEEEEESSCCTTS-----------SEEEECCTTSCHHHHHHHHHHHHHHHHTTC
T ss_pred             CCEEEEECCCCHHHHHHHHHHHHCCCEEEEEECCchhcc-----------cccceeccccCchhHHHHHHHHHHHHhcCC
Confidence            456799999999999999999999999999999875311           13456678898888888888777774  58


Q ss_pred             CccEEEEccccCCcccccccCChHHHHHHHHhhhHHHHHHHHHHhhhhhhcCCeEEEEcCccccccCCCCccchHHHHHH
Q 044010          125 RLDHLVNNAGISSVALFEDIVNITDFKQIMNINFWGSVYTTRFAVPHLRYTKGKIVVLSSAASWLTAPRMSFYNASKAAL  204 (248)
Q Consensus       125 ~id~vv~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~g~iV~isS~~~~~~~~~~~~Y~~sKaal  204 (248)
                      ++|++|||||........+..+.++|+..+++|+.+++.++|++.|+|+ ++|+||++||..+..+.+++.+|++||+|+
T Consensus        71 ~iD~linnAG~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~m~-~~g~Iv~isS~~~~~~~~~~~~Y~asKaal  149 (235)
T d1ooea_          71 QVDGVFCVAGGWAGGSASSKDFVKNADLMIKQSVWSSAIAAKLATTHLK-PGGLLQLTGAAAAMGPTPSMIGYGMAKAAV  149 (235)
T ss_dssp             CEEEEEECCCCCCCBCTTSTTHHHHHHHHHHHHHHHHHHHHHHHHHHEE-EEEEEEEECCGGGGSCCTTBHHHHHHHHHH
T ss_pred             CeeEEEECCcccccccccccCcHHHHhhHhhhHHHHHHHHhhhcccccc-cceEEEEeccHHhcCCcccccchHHHHHHH
Confidence            9999999999765544444345688999999999999999999999996 468999999999999999999999999999


Q ss_pred             HHHHHHHHHHhC---CCeEEEEEecCccccCccccccccc
Q 044010          205 VLFFETLRVELG---SDVGVTIVTPGFIESELTQGKFLTG  241 (248)
Q Consensus       205 ~~l~~~la~~~~---~~i~v~~v~pg~v~T~~~~~~~~~~  241 (248)
                      ++|+++++.|++   .+|+||+|+||+++|+|.++...+.
T Consensus       150 ~~l~~~la~e~~~~~~~i~v~~i~Pg~~~T~~~~~~~~~~  189 (235)
T d1ooea_         150 HHLTSSLAAKDSGLPDNSAVLTIMPVTLDTPMNRKWMPNA  189 (235)
T ss_dssp             HHHHHHHHSTTSSCCTTCEEEEEEESCBCCHHHHHHSTTC
T ss_pred             HHHHHHHHHHhccCCCceEEEEEecCcCcCcchhhhCcCC
Confidence            999999999996   3599999999999999988776543

>d1qsga_ c.2.1.2 (A:) Enoyl-ACP reductase {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Enoyl-ACP reductase
species: Escherichia coli [TaxId: 562]

Probab=100.00  E-value=8.6e-35  Score=242.24  Aligned_cols=194  Identities=21%  Similarity=0.250  Sum_probs=168.1

Q ss_pred             CCCCCEEEEcCCCC--hHHHHHHHHHHHcCCeEEEEeCCcchHHHHHHHHHhhCCCcEEEEEccCCCHHHHHHHHHHHHh
Q 044010           44 DVSGKVVIITGASS--GIGEHLAYEYARRGACLALCARREKSLEEVADTAREIGSPDVITIRADVSKVDDCRSLVEETMN  121 (248)
Q Consensus        44 ~~~~k~~lVtGg~~--gIG~aia~~l~~~G~~V~l~~r~~~~~~~~~~~l~~~~~~~v~~~~~D~~~~~~~~~~~~~~~~  121 (248)
                      -++||++|||||++  |||.++|+.|+++|++|++.+|+++..+...+ +....+ ....+.+|+++..++.+.++++.+
T Consensus         2 ~L~gK~~lITGass~~GIG~aiA~~l~~~G~~V~i~~~~~~~~~~~~~-~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~   79 (258)
T d1qsga_           2 FLSGKRILVTGVASKLSIAYGIAQAMHREGAELAFTYQNDKLKGRVEE-FAAQLG-SDIVLQCDVAEDASIDTMFAELGK   79 (258)
T ss_dssp             TTTTCEEEECCCCSTTSHHHHHHHHHHHTTCEEEEEESSTTTHHHHHH-HHHHTT-CCCEEECCTTCHHHHHHHHHHHHT
T ss_pred             cCCCCEEEEECCCCchhHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHH-HHhhcC-CcceeecccchHHHHHHHHHHhhh
Confidence            47999999999998  89999999999999999999999765555544 444333 567789999999999999999999


Q ss_pred             HcCCccEEEEccccCCccccc----ccCChHHHHHHHHhhhHHHHHHHHHHhhhhhhcCCeEEEEcCccccccCCCCccc
Q 044010          122 HFGRLDHLVNNAGISSVALFE----DIVNITDFKQIMNINFWGSVYTTRFAVPHLRYTKGKIVVLSSAASWLTAPRMSFY  197 (248)
Q Consensus       122 ~~g~id~vv~~ag~~~~~~~~----~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~g~iV~isS~~~~~~~~~~~~Y  197 (248)
                      .++.+|++|||++........    +....+.|...+++|+.+.+.+.+.+.+.+. +++.|+++||..+..+.|.+.+|
T Consensus        80 ~~~~~d~~v~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~Ii~iss~~~~~~~~~~~~Y  158 (258)
T d1qsga_          80 VWPKFDGFVHSIGFAPGDQLDGDYVNAVTREGFKIAHDISSYSFVAMAKACRSMLN-PGSALLTLSYLGAERAIPNYNVM  158 (258)
T ss_dssp             TCSSEEEEEECCCCCCGGGGSSCHHHHCCHHHHHHHHHHHTHHHHHHHHHHGGGEE-EEEEEEEEECGGGTSBCTTTTHH
T ss_pred             cccccceEEEeecccccccccccccccchHHHHHHHHHHHHHHHHHHHHHHHHhcc-CCcEEEEecchhhccCCCCcHHH
Confidence            999999999999987544331    2245677999999999999999999999985 56789999999999999999999


Q ss_pred             hHHHHHHHHHHHHHHHHhCCC-eEEEEEecCccccCcccccccc
Q 044010          198 NASKAALVLFFETLRVELGSD-VGVTIVTPGFIESELTQGKFLT  240 (248)
Q Consensus       198 ~~sKaal~~l~~~la~~~~~~-i~v~~v~pg~v~T~~~~~~~~~  240 (248)
                      ++||+|+++|++++|+|++++ ||||+|+||+|+|++......+
T Consensus       159 ~~sKaal~~ltr~lA~el~~~gIrVN~I~PG~i~T~~~~~~~~~  202 (258)
T d1qsga_         159 GLAKASLEANVRYMANAMGPEGVRVNAISAGPIRTLAASGIKDF  202 (258)
T ss_dssp             HHHHHHHHHHHHHHHHHHTTTTEEEEEEEECCCCCTTGGGSTTH
T ss_pred             HHHHHHHHHHHHHHHHHhCccCceeecccccccccccccccchh
Confidence            999999999999999999986 9999999999999998865443

>d1uh5a_ c.2.1.2 (A:) Enoyl-ACP reductase {Malaria parasite (Plasmodium falciparum) [TaxId: 5833]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Enoyl-ACP reductase
species: Malaria parasite (Plasmodium falciparum) [TaxId: 5833]

Probab=100.00  E-value=2e-34  Score=248.44  Aligned_cols=188  Identities=14%  Similarity=0.175  Sum_probs=155.8

Q ss_pred             CCEEEEcC--CCChHHHHHHHHHHHcCCeEEEEeCCcchHHHHHHHHHhhCCC-----------cEEEE-----------
Q 044010           47 GKVVIITG--ASSGIGEHLAYEYARRGACLALCARREKSLEEVADTAREIGSP-----------DVITI-----------  102 (248)
Q Consensus        47 ~k~~lVtG--g~~gIG~aia~~l~~~G~~V~l~~r~~~~~~~~~~~l~~~~~~-----------~v~~~-----------  102 (248)
                      +|++||||  +++|||+++|++|+++|++|++++++............+....           .....           
T Consensus         2 ~kVAlITGaa~s~GIG~aiA~~la~~GA~V~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   81 (329)
T d1uh5a_           2 EDICFIAGIGDTNGYGWGIAKELSKRNVKIIFGIWPPVYNIFMKNYKNGKFDNDMIIDKDKKMNILDMLPFDASFDTAND   81 (329)
T ss_dssp             CCEEEEECCSSSSSHHHHHHHHHHHTTCEEEEEECGGGHHHHHHHHHTTTTTGGGEETTTEECCEEEEEECCTTCSSGGG
T ss_pred             CcEEEEeCCCCCChHHHHHHHHHHHcCCEEEEEeCchhhhhhhHHHHHHhhhhHHHHHHHhhhhhhhcccccceehhhcc
Confidence            79999999  5589999999999999999999999876544444332222110           11222           


Q ss_pred             ---------EccCCCHHHHHHHHHHHHhHcCCccEEEEccccCCc--ccccccCChHHHHHHHHhhhHHHHHHHHHHhhh
Q 044010          103 ---------RADVSKVDDCRSLVEETMNHFGRLDHLVNNAGISSV--ALFEDIVNITDFKQIMNINFWGSVYTTRFAVPH  171 (248)
Q Consensus       103 ---------~~D~~~~~~~~~~~~~~~~~~g~id~vv~~ag~~~~--~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~  171 (248)
                               .+|+++.++++++++++.+++|++|++|||||...+  .++.+ ++.++|++.+++|+++++.++|++.|+
T Consensus        82 ~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~G~iDilVnnag~~~~~~~~~~~-~~~~~~~~~~~vn~~~~~~~~k~~~~~  160 (329)
T d1uh5a_          82 IDEETKNNKRYNMLQNYTIEDVANLIHQKYGKINMLVHSLANAKEVQKDLLN-TSRKGYLDALSKSSYSLISLCKYFVNI  160 (329)
T ss_dssp             CCHHHHTSHHHHTCCCCSHHHHHHHHHHHHCCEEEEEECCCCCTTTTSCGGG-CCHHHHHHHHHHHTHHHHHHHHHHGGG
T ss_pred             cchhhhhhhhhhhhhHHHHHHHHHHHHHHhCCCCeeccccccccccCCChhh-hhhhhhhhhcccchhHHHHHHHHHHhh
Confidence                     247778899999999999999999999999997653  34444 688999999999999999999999999


Q ss_pred             hhhcCCeEEEEcCccccccCCCC-ccchHHHHHHHHHHHHHHHHhCC--CeEEEEEecCccccCcccc
Q 044010          172 LRYTKGKIVVLSSAASWLTAPRM-SFYNASKAALVLFFETLRVELGS--DVGVTIVTPGFIESELTQG  236 (248)
Q Consensus       172 ~~~~~g~iV~isS~~~~~~~~~~-~~Y~~sKaal~~l~~~la~~~~~--~i~v~~v~pg~v~T~~~~~  236 (248)
                      |+ ++|+||++||.++..+.|++ ..|++||+|+++|++++|.|+++  +||||+|+||+|+|++.+.
T Consensus       161 m~-~~GsIv~iss~~~~~~~p~y~~~y~asKaal~~ltr~lA~Ela~~~gIRVNaI~PG~i~T~a~~~  227 (329)
T d1uh5a_         161 MK-PQSSIISLTYHASQKVVPGYGGGMSSAKAALESDTRVLAYHLGRNYNIRINTISAGPLKSRAATA  227 (329)
T ss_dssp             EE-EEEEEEEEECGGGTSCCTTCTTTHHHHHHHHHHHHHHHHHHHHHHHCCEEEEEEECCCCCTTGGG
T ss_pred             cc-cccccccceeehhcccccccchhhhhhhccccccchhhHHHHhcccCcEEEEEecCcccchhhhc
Confidence            96 56899999999999888874 57899999999999999999975  5999999999999976554

>d1e7wa_ c.2.1.2 (A:) Dihydropteridin reductase (pteridine reductase) {Leishmania major [TaxId: 5664]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Dihydropteridin reductase (pteridine reductase)
species: Leishmania major [TaxId: 5664]

Probab=100.00  E-value=1.2e-33  Score=238.14  Aligned_cols=184  Identities=21%  Similarity=0.245  Sum_probs=153.4

Q ss_pred             CEEEEcCCCChHHHHHHHHHHHcCCeEEEEeCC-cchHHHHHHHHHhhCCCcEEEEE-----------------ccCCCH
Q 044010           48 KVVIITGASSGIGEHLAYEYARRGACLALCARR-EKSLEEVADTAREIGSPDVITIR-----------------ADVSKV  109 (248)
Q Consensus        48 k~~lVtGg~~gIG~aia~~l~~~G~~V~l~~r~-~~~~~~~~~~l~~~~~~~v~~~~-----------------~D~~~~  109 (248)
                      .++|||||++|||+++|++|+++|++|++.+|+ .+..++..+++.+.++.....++                 +|+++.
T Consensus         3 pVAlITGas~GIG~aiA~~la~~Ga~V~i~~~~~~~~~~~~~~~l~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~dv~~~   82 (284)
T d1e7wa_           3 PVALVTGAAKRLGRSIAEGLHAEGYAVCLHYHRSAAEANALSATLNARRPNSAITVQADLSNVATAPVSGADGSAPVTLF   82 (284)
T ss_dssp             CEEEETTCSSHHHHHHHHHHHHTTCEEEEEESSCHHHHHHHHHHHHHHSTTCEEEEECCCSSSCBCCCC----CCCBCHH
T ss_pred             CEEEEeCCCCHHHHHHHHHHHHcCCEEEEEeCCCHHHHHHHHHHHHhhcCCceEEEEeecccccccccccccccccCCCH
Confidence            479999999999999999999999999998765 55677778888877655555554                 559999


Q ss_pred             HHHHHHHHHHHhHcCCccEEEEccccCCcccccccCChHH--------------HHHHHHhhhHHHHHHHHHHhhhhh--
Q 044010          110 DDCRSLVEETMNHFGRLDHLVNNAGISSVALFEDIVNITD--------------FKQIMNINFWGSVYTTRFAVPHLR--  173 (248)
Q Consensus       110 ~~~~~~~~~~~~~~g~id~vv~~ag~~~~~~~~~~~~~~~--------------~~~~~~~n~~~~~~l~~~~~~~~~--  173 (248)
                      ++++++++++.+++|++|++|||||...+.++.+. +.++              +...+.+|+.+++++.|.+.+.+.  
T Consensus        83 ~~v~~~~~~~~~~~G~iDiLVnnAG~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~  161 (284)
T d1e7wa_          83 TRCAELVAACYTHWGRCDVLVNNASSFYPTPLLRN-DEDGHEPCVGDREAMETATADLFGSNAIAPYFLIKAFAHRVAGT  161 (284)
T ss_dssp             HHHHHHHHHHHHHHSCCCEEEECCCCCCCCCCCC--------------HHHHHHHHHHHHHHTHHHHHHHHHHHHHHHTS
T ss_pred             HHHHHHHHHHHHHhCCCCEEEecCCccCCCchhhC-CHHHhhhhhhhHHHHHHHHHHHHhhheeeeeeeeccccchhhhh
Confidence            99999999999999999999999999877665542 3333              345789999999999999877542  


Q ss_pred             ----hc-CCeEEEEcCccccccCCCCccchHHHHHHHHHHHHHHHHhCCC-eEEEEEecCccccC
Q 044010          174 ----YT-KGKIVVLSSAASWLTAPRMSFYNASKAALVLFFETLRVELGSD-VGVTIVTPGFIESE  232 (248)
Q Consensus       174 ----~~-~g~iV~isS~~~~~~~~~~~~Y~~sKaal~~l~~~la~~~~~~-i~v~~v~pg~v~T~  232 (248)
                          +. .++|++++|.....+.+++.+|++||+|+++|++++|+|+++. ||||+|+||++.|.
T Consensus       162 ~~~~~~~~~~ii~~~s~~~~~~~~~~~~Y~asKaal~~lt~~lA~el~~~gIrvN~I~PG~t~~~  226 (284)
T d1e7wa_         162 PAKHRGTNYSIINMVDAMTNQPLLGYTIYTMAKGALEGLTRSAALELAPLQIRVNGVGPGLSVLV  226 (284)
T ss_dssp             CGGGSCSCEEEEEECCTTTTSCCTTCHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEESSBCCG
T ss_pred             HHHhcCCCCcccccccccccCCccceeeeccccccchhhhHHHHHHhCCcccccccccccccccc
Confidence                12 3689999999999999999999999999999999999999885 99999999986543

>d2pd4a1 c.2.1.2 (A:2-275) Enoyl-ACP reductase {Helicobacter pylori [TaxId: 210]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Enoyl-ACP reductase
species: Helicobacter pylori [TaxId: 210]

Probab=100.00  E-value=3.8e-33  Score=234.17  Aligned_cols=193  Identities=23%  Similarity=0.270  Sum_probs=156.5

Q ss_pred             CCCCCEEEEcCCCC--hHHHHHHHHHHHcCCeEEEEeCCcchHHHHHHHHHhhCCCcEEEEEccCCCHHHHHHHHHHHHh
Q 044010           44 DVSGKVVIITGASS--GIGEHLAYEYARRGACLALCARREKSLEEVADTAREIGSPDVITIRADVSKVDDCRSLVEETMN  121 (248)
Q Consensus        44 ~~~~k~~lVtGg~~--gIG~aia~~l~~~G~~V~l~~r~~~~~~~~~~~l~~~~~~~v~~~~~D~~~~~~~~~~~~~~~~  121 (248)
                      .|+||++|||||+|  |||+++|++|+++|++|++++|+++ .++..+++.+.+. ...+..+|+++.++++++++++.+
T Consensus         2 ~L~gK~alITGaag~~GIG~AiA~~la~~Ga~V~i~~r~~~-~~~~~~~l~~~~~-~~~~~~~d~~~~~~~~~~~~~~~~   79 (274)
T d2pd4a1           2 FLKGKKGLIVGVANNKSIAYGIAQSCFNQGATLAFTYLNES-LEKRVRPIAQELN-SPYVYELDVSKEEHFKSLYNSVKK   79 (274)
T ss_dssp             TTTTCEEEEECCCSTTSHHHHHHHHHHTTTCEEEEEESSTT-THHHHHHHHHHTT-CCCEEECCTTCHHHHHHHHHHHHH
T ss_pred             cCCCCEEEEECCCCCcHHHHHHHHHHHHCCCEEEEEeCCHH-HHHHHHHHHhhCC-ceeEeeecccchhhHHHHHHHHHH
Confidence            47999999999764  9999999999999999999999854 4555666666664 567889999999999999999999


Q ss_pred             HcCCccEEEEccccCCccccccc---CChHHHHHHHHhhhHHHHHHHHHHhhhhhhcCCeEEEEcCccccccCCCCccch
Q 044010          122 HFGRLDHLVNNAGISSVALFEDI---VNITDFKQIMNINFWGSVYTTRFAVPHLRYTKGKIVVLSSAASWLTAPRMSFYN  198 (248)
Q Consensus       122 ~~g~id~vv~~ag~~~~~~~~~~---~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~g~iV~isS~~~~~~~~~~~~Y~  198 (248)
                      .+|++|++|||+|........+.   ...+.+...+..+..+.....+...+.+. .++.|++.|+.+...+.+.+..|+
T Consensus        80 ~~g~id~lV~nag~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~i~~~s~~~~~~~~~~~~~y~  158 (274)
T d2pd4a1          80 DLGSLDFIVHSVAFAPKEALEGSLLETSKSAFNTAMEISVYSLIELTNTLKPLLN-NGASVLTLSYLGSTKYMAHYNVMG  158 (274)
T ss_dssp             HTSCEEEEEECCCCCCGGGGSSCGGGCCHHHHHHHHHHHTHHHHHHHHHHGGGEE-EEEEEEEEECGGGTSBCTTCHHHH
T ss_pred             HcCCCCeEEeecccccccccccccccccchhhhhhhccccccccccccccccccc-cCcceeeecccccccccccchhhh
Confidence            99999999999998765443332   23345555555566666666666555432 345677788888888888889999


Q ss_pred             HHHHHHHHHHHHHHHHhCCC-eEEEEEecCccccCccccccc
Q 044010          199 ASKAALVLFFETLRVELGSD-VGVTIVTPGFIESELTQGKFL  239 (248)
Q Consensus       199 ~sKaal~~l~~~la~~~~~~-i~v~~v~pg~v~T~~~~~~~~  239 (248)
                      +||+|+++++++++.|++++ ||||+|+||+++|+|......
T Consensus       159 asK~al~~ltr~lA~e~~~~GIrvN~I~PG~v~T~~~~~~~~  200 (274)
T d2pd4a1         159 LAKAALESAVRYLAVDLGKHHIRVNALSAGPIRTLASSGIAD  200 (274)
T ss_dssp             HHHHHHHHHHHHHHHHHHTTTCEEEEEEECCCCCTTGGGSTT
T ss_pred             HHHHHHHHHHHhhHHHhcCcCceecccccCcccCccccccCc
Confidence            99999999999999999886 999999999999999876654

>d1d7oa_ c.2.1.2 (A:) Enoyl-ACP reductase {Oil seed rape (Brassica napus) [TaxId: 3708]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Enoyl-ACP reductase
species: Oil seed rape (Brassica napus) [TaxId: 3708]

Probab=100.00  E-value=5.9e-33  Score=235.37  Aligned_cols=197  Identities=18%  Similarity=0.141  Sum_probs=154.1

Q ss_pred             cccCCCCCEEEEcCCCC--hHHHHHHHHHHHcCCeEEEEeCCcchHHHHHHHHHhhCC----------CcE-EEEEcc--
Q 044010           41 FSEDVSGKVVIITGASS--GIGEHLAYEYARRGACLALCARREKSLEEVADTAREIGS----------PDV-ITIRAD--  105 (248)
Q Consensus        41 ~~~~~~~k~~lVtGg~~--gIG~aia~~l~~~G~~V~l~~r~~~~~~~~~~~l~~~~~----------~~v-~~~~~D--  105 (248)
                      ++++|+||++|||||++  |||+++|++|+++|++|++.+|+........+.......          ... ....+|  
T Consensus         2 ~~~~L~gK~alVTGass~~GIG~aiA~~la~~Ga~Vvi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   81 (297)
T d1d7oa_           2 LPIDLRGKRAFIAGIADDNGYGWAVAKSLAAAGAEILVGTWVPALNIFETSLRRGKFDQSRVLPDGSLMEIKKVYPLDAV   81 (297)
T ss_dssp             CCCCCTTCEEEEECCSSSSSHHHHHHHHHHHTTCEEEEEEEHHHHHHHHHHHHTTTTTGGGBCTTSSBCCEEEEEEECTT
T ss_pred             CCcCCCCCEEEEECCCCCchHHHHHHHHHHHCCCEEEEEeCchhhhhhHHHHHHhhhhhhhhhhhhhhhhhhhhhhhhhh
Confidence            56899999999999875  999999999999999999999976543333322211110          011 233333  


Q ss_pred             ------------------CCCHHHHHHHHHHHHhHcCCccEEEEccccCC--cccccccCChHHHHHHHHhhhHHHHHHH
Q 044010          106 ------------------VSKVDDCRSLVEETMNHFGRLDHLVNNAGISS--VALFEDIVNITDFKQIMNINFWGSVYTT  165 (248)
Q Consensus       106 ------------------~~~~~~~~~~~~~~~~~~g~id~vv~~ag~~~--~~~~~~~~~~~~~~~~~~~n~~~~~~l~  165 (248)
                                        .++..+++++++++.+++|++|++|||||...  ..++.+ .+.++|++.+++|+.+++.++
T Consensus        82 ~~~~~~~~~dv~~~~~~~~~~~~~~~~~~~~~~~~~G~iDilVnnAg~~~~~~~~~~~-~~~~~~~~~~~vn~~~~~~~~  160 (297)
T d1d7oa_          82 FDNPEDVPEDVKANKRYAGSSNWTVQEAAECVRQDFGSIDILVHSLANGPEVSKPLLE-TSRKGYLAAISASSYSFVSLL  160 (297)
T ss_dssp             CCSGGGSCHHHHTSHHHHHCCCCSHHHHHHHHHHHHSCEEEEEECCCCCTTTTSCGGG-CCHHHHHHHHHHHTHHHHHHH
T ss_pred             ccccccchhhhhhhhhhhhccHHHHHHHHHHHHHHhCCCcccccccccccccccchhh-hhcccccccccchhhhhhhhh
Confidence                              35566788999999999999999999999754  344544 688999999999999999999


Q ss_pred             HHHhhhhhhcCCeEEEEcCcccc-ccCCCCccchHHHHHHHHHHHHHHHHhC-C-CeEEEEEecCccccCccccccc
Q 044010          166 RFAVPHLRYTKGKIVVLSSAASW-LTAPRMSFYNASKAALVLFFETLRVELG-S-DVGVTIVTPGFIESELTQGKFL  239 (248)
Q Consensus       166 ~~~~~~~~~~~g~iV~isS~~~~-~~~~~~~~Y~~sKaal~~l~~~la~~~~-~-~i~v~~v~pg~v~T~~~~~~~~  239 (248)
                      +++.+.+.+ +|+++++++.... ...+....|+++|+++.++++.++.+++ + +||||+|+||+++|++......
T Consensus       161 ~~~~~~~~~-~g~~~~~~~~~~~~~~~~~~~~y~~aKaa~~~l~~~~a~e~~~~~gIrvN~I~PG~i~T~~~~~~~~  236 (297)
T d1d7oa_         161 SHFLPIMNP-GGASISLTYIASERIIPGYGGGMSSAKAALESDTRVLAFEAGRKQNIRVNTISAGPLGSRAAKAIGF  236 (297)
T ss_dssp             HHHGGGEEE-EEEEEEEECGGGTSCCTTCTTTHHHHHHHHHHHHHHHHHHHHHHHCCEEEEEEECCCBCCCSSCCSH
T ss_pred             hHHHHHhhc-CCcceeeeehhhcccccccccceecccccccccccccchhccccceEEecccccccccchhhhhccC
Confidence            999998864 4566666655544 4457778999999999999999999996 3 5999999999999999876543

>d2h7ma1 c.2.1.2 (A:2-269) Enoyl-ACP reductase {Mycobacterium tuberculosis, TB, gene InhA [TaxId: 1773]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Enoyl-ACP reductase
species: Mycobacterium tuberculosis, TB, gene InhA [TaxId: 1773]

Probab=100.00  E-value=2.8e-32  Score=227.93  Aligned_cols=190  Identities=18%  Similarity=0.195  Sum_probs=158.1

Q ss_pred             CCCCCEEEEcC--CCChHHHHHHHHHHHcCCeEEEEeCCcchHHHHHHHHHhhCCCcEEEEEccCCCHHHHHHHHHHHHh
Q 044010           44 DVSGKVVIITG--ASSGIGEHLAYEYARRGACLALCARREKSLEEVADTAREIGSPDVITIRADVSKVDDCRSLVEETMN  121 (248)
Q Consensus        44 ~~~~k~~lVtG--g~~gIG~aia~~l~~~G~~V~l~~r~~~~~~~~~~~l~~~~~~~v~~~~~D~~~~~~~~~~~~~~~~  121 (248)
                      -|+||++||||  |++|||+++|++|+++|++|++++|+.++.   .+++.+..+.+...++||+++.++++++++.+.+
T Consensus         3 ~l~gK~~lItGaag~~GIG~aiA~~la~~Ga~Vil~~~~~~~~---~~~~~~~~~~~~~~~~~dv~~~~~~~~~~~~v~~   79 (268)
T d2h7ma1           3 LLDGKRILVSGIITDSSIAFHIARVAQEQGAQLVLTGFDRLRL---IQRITDRLPAKAPLLELDVQNEEHLASLAGRVTE   79 (268)
T ss_dssp             TTTTCEEEECCCSSTTCHHHHHHHHHHHTTCEEEEEECSCHHH---HHHHHTTSSSCCCEEECCTTCHHHHHHHHHHHHH
T ss_pred             CCCCCEEEEECCCCCCHHHHHHHHHHHHcCCEEEEEeCChHHH---HHHHHHHcCCceeeEeeecccccccccccchhhh
Confidence            57999999999  457999999999999999999999987654   3344444445677899999999999999999987


Q ss_pred             Hc---CCccEEEEccccCCcccc----cccCChHHHHHHHHhhhHHHHHHHHHHhhhhhhcCCeEEEEcCccccccCCCC
Q 044010          122 HF---GRLDHLVNNAGISSVALF----EDIVNITDFKQIMNINFWGSVYTTRFAVPHLRYTKGKIVVLSSAASWLTAPRM  194 (248)
Q Consensus       122 ~~---g~id~vv~~ag~~~~~~~----~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~g~iV~isS~~~~~~~~~~  194 (248)
                      .+   +++|+++||+|+.+....    ..+.+.++|.+.+.+|..+.+...+...+.+.  ++.+++++|.....+.|.+
T Consensus        80 ~~~~~~~ld~~i~~ag~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~i~~~s~~~~~~~p~~  157 (268)
T d2h7ma1          80 AIGAGNKLDGVVHSIGFMPQTGMGINPFFDAPYADVSKGIHISAYSYASMAKALLPIMN--PGGSIVGMDFDPSRAMPAY  157 (268)
T ss_dssp             HHCTTCCEEEEEECCCCCCGGGSTTSCGGGCCHHHHHHHHHHHTHHHHHHHHHHGGGEE--EEEEEEEEECCCSSCCTTT
T ss_pred             ccccCCCcceeeecccccCccccccccccccchhhhhhhhhhhhhHHHHHHHHHhhhcc--cccccccccccccccCccc
Confidence            65   679999999997653221    12256789999999999999999999887653  3456666667777888899


Q ss_pred             ccchHHHHHHHHHHHHHHHHhCCC-eEEEEEecCccccCcccccc
Q 044010          195 SFYNASKAALVLFFETLRVELGSD-VGVTIVTPGFIESELTQGKF  238 (248)
Q Consensus       195 ~~Y~~sKaal~~l~~~la~~~~~~-i~v~~v~pg~v~T~~~~~~~  238 (248)
                      ..|+++|+|+.++++++++|++++ ||||+|+||+++|++.....
T Consensus       158 ~~y~~sK~a~~~ltr~lA~e~~~~gIrVN~V~PG~v~T~~~~~~~  202 (268)
T d2h7ma1         158 NWMTVAKSALESVNRFVAREAGKYGVRSNLVAAGPIRTLAMSAIV  202 (268)
T ss_dssp             HHHHHHHHHHHHHHHHHHHHHHTTTCEEEEEEECCCCCHHHHHHH
T ss_pred             chhhccccchhhccccchhhhhccCCcceEEecCCCCChhhhhhc
Confidence            999999999999999999999885 99999999999999876544

>d1uaya_ c.2.1.2 (A:) Type II 3-hydroxyacyl-CoA dehydrogenase {Thermus thermophilus [TaxId: 274]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Type II 3-hydroxyacyl-CoA dehydrogenase
species: Thermus thermophilus [TaxId: 274]

Probab=100.00  E-value=1.3e-32  Score=226.41  Aligned_cols=180  Identities=25%  Similarity=0.354  Sum_probs=151.4

Q ss_pred             CCEEEEcCCCChHHHHHHHHHHHcCCeEEEEeCCcchHHHHHHHHHhhCCCcEEEEEccCCCHHHHHHHHHHHHhHcCCc
Q 044010           47 GKVVIITGASSGIGEHLAYEYARRGACLALCARREKSLEEVADTAREIGSPDVITIRADVSKVDDCRSLVEETMNHFGRL  126 (248)
Q Consensus        47 ~k~~lVtGg~~gIG~aia~~l~~~G~~V~l~~r~~~~~~~~~~~l~~~~~~~v~~~~~D~~~~~~~~~~~~~~~~~~g~i  126 (248)
                      .|++|||||++|||+++|++|+++|++|++++|+++.             .+.....+|+++......+.++..+.. ..
T Consensus         1 DK~alITGas~GIG~aiA~~la~~Ga~V~i~~~~~~~-------------~~~~~~~~d~~~~~~~~~~~~~~~~~~-~~   66 (241)
T d1uaya_           1 ERSALVTGGASGLGRAAALALKARGYRVVVLDLRREG-------------EDLIYVEGDVTREEDVRRAVARAQEEA-PL   66 (241)
T ss_dssp             CCEEEEETTTSHHHHHHHHHHHHHTCEEEEEESSCCS-------------SSSEEEECCTTCHHHHHHHHHHHHHHS-CE
T ss_pred             CCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEECCccc-------------ccceEeeccccchhhhHHHHHhhhccc-cc
Confidence            4899999999999999999999999999999998753             245678999999999999998887665 45


Q ss_pred             cEEEEccccCCcc---cccccCChHHHHHHHHhhhHHHHHHHHHHhhhh------hh-cCCeEEEEcCccccccCCCCcc
Q 044010          127 DHLVNNAGISSVA---LFEDIVNITDFKQIMNINFWGSVYTTRFAVPHL------RY-TKGKIVVLSSAASWLTAPRMSF  196 (248)
Q Consensus       127 d~vv~~ag~~~~~---~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~------~~-~~g~iV~isS~~~~~~~~~~~~  196 (248)
                      +..+++++.....   ......+.+.|++.+++|+.+++.+++.+.+.+      .+ +.|+||++||..+..+.+++.+
T Consensus        67 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~~~~~~G~Ii~isS~~~~~~~~~~~~  146 (241)
T d1uaya_          67 FAVVSAAGVGLAEKILGKEGPHGLESFRRVLEVNLLGTFNVLRLAAWAMRENPPDAEGQRGVIVNTASVAAFEGQIGQAA  146 (241)
T ss_dssp             EEEEECCCCCCCCCSBCSSSBCCHHHHHHHHHHHTHHHHHHHHHHHHHHTTCCCCTTSCSEEEEEECCTHHHHCCTTCHH
T ss_pred             cchhhhhhccccccccccccchhHHHHHHHHHHHhhhhHHHHHHHHHHhhhhhhhcccCceeeeeecchhhccCCCCchh
Confidence            5566666544321   122224678999999999999999999998873      32 3489999999999999999999


Q ss_pred             chHHHHHHHHHHHHHHHHhCCC-eEEEEEecCccccCcccccccc
Q 044010          197 YNASKAALVLFFETLRVELGSD-VGVTIVTPGFIESELTQGKFLT  240 (248)
Q Consensus       197 Y~~sKaal~~l~~~la~~~~~~-i~v~~v~pg~v~T~~~~~~~~~  240 (248)
                      |++||+|+++|++++|.|++++ ||||+|+||+++|++......+
T Consensus       147 Y~asKaal~~lt~~lA~ela~~gIrVN~V~PG~i~T~~~~~~~~~  191 (241)
T d1uaya_         147 YAASKGGVVALTLPAARELAGWGIRVVTVAPGLFDTPLLQGLPEK  191 (241)
T ss_dssp             HHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECSCSSHHHHTSCHH
T ss_pred             hHHHHHHHHHHHHHHHHHHhhcCCceeeecCCcccccccchhhhh
Confidence            9999999999999999999985 9999999999999998766544

>d1mxha_ c.2.1.2 (A:) Dihydropteridin reductase (pteridine reductase) {Trypanosoma cruzi [TaxId: 5693]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Dihydropteridin reductase (pteridine reductase)
species: Trypanosoma cruzi [TaxId: 5693]

Probab=100.00  E-value=1.2e-31  Score=223.64  Aligned_cols=189  Identities=20%  Similarity=0.257  Sum_probs=158.0

Q ss_pred             CEEEEcCCCChHHHHHHHHHHHcCCeEEEEeCCcch-HHHHHHHHHhhCCCcEEEEEccCCC----HHHHHHHHHHHHhH
Q 044010           48 KVVIITGASSGIGEHLAYEYARRGACLALCARREKS-LEEVADTAREIGSPDVITIRADVSK----VDDCRSLVEETMNH  122 (248)
Q Consensus        48 k~~lVtGg~~gIG~aia~~l~~~G~~V~l~~r~~~~-~~~~~~~l~~~~~~~v~~~~~D~~~----~~~~~~~~~~~~~~  122 (248)
                      .++|||||++|||+++|++|+++|++|++++|+.++ .++..+++.+..+.+.....+|..+    ++.++++++++.++
T Consensus         2 ~vAlVTGas~GIG~aia~~la~~G~~Vvi~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   81 (266)
T d1mxha_           2 PAAVITGGARRIGHSIAVRLHQQGFRVVVHYRHSEGAAQRLVAELNAARAGSAVLCKGDLSLSSSLLDCCEDIIDCSFRA   81 (266)
T ss_dssp             CEEEETTCSSHHHHHHHHHHHHTTCEEEEEESSCHHHHHHHHHHHHHHSTTCEEEEECCCSSSTTHHHHHHHHHHHHHHH
T ss_pred             CEEEEeCCCCHHHHHHHHHHHHCCCEEEEEECCchHHHHHHHHHHHhhcCCceEEEecccccchhHHHHHHHHHHHHHHH
Confidence            489999999999999999999999999999998654 5677888888776677777766654    56788888889999


Q ss_pred             cCCccEEEEccccCCccccccc----------CChHHHHHHHHhhhHHHHHHHHHHhhhhhh------cCCeEEEEcCcc
Q 044010          123 FGRLDHLVNNAGISSVALFEDI----------VNITDFKQIMNINFWGSVYTTRFAVPHLRY------TKGKIVVLSSAA  186 (248)
Q Consensus       123 ~g~id~vv~~ag~~~~~~~~~~----------~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~------~~g~iV~isS~~  186 (248)
                      +|++|++|||||...+.+..+.          ...+.+...+..|+.+.+...+...+.+..      ..+.++++++..
T Consensus        82 ~g~iDilvnnAG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  161 (266)
T d1mxha_          82 FGRCDVLVNNASAYYPTPLLPGDDTNGAADAKPIDAQVAELFGSNAVAPLFLIRAFARRQGEGGAWRSRNLSVVNLCDAM  161 (266)
T ss_dssp             HSCCCEEEECCCCCCCCCSCC-----------CHHHHHHHHHHHHTHHHHHHHHHHHHTC-------CCCEEEEEECCGG
T ss_pred             hCCCCEEEECCccCCCCcccccccccchhcccccccccccccccccccccchhhhhccccccccccccccccchhhhhcc
Confidence            9999999999998765543221          123557788899999999998888877632      236888899999


Q ss_pred             ccccCCCCccchHHHHHHHHHHHHHHHHhCCC-eEEEEEecCccccCcccc
Q 044010          187 SWLTAPRMSFYNASKAALVLFFETLRVELGSD-VGVTIVTPGFIESELTQG  236 (248)
Q Consensus       187 ~~~~~~~~~~Y~~sKaal~~l~~~la~~~~~~-i~v~~v~pg~v~T~~~~~  236 (248)
                      +..+.|++.+|++||+|++++++++|+|++++ ||||+|+||+++|++...
T Consensus       162 ~~~~~~~~~~Y~asKaal~~lt~~lA~e~~~~gIrVN~I~PG~i~t~~~~~  212 (266)
T d1mxha_         162 TDLPLPGFCVYTMAKHALGGLTRAAALELAPRHIRVNAVAPGLSLLPPAMP  212 (266)
T ss_dssp             GGSCCTTCHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEESSBSCCSSSC
T ss_pred             ccccCcchhhhhhhHHHHhhhHHHHHHHhCccCcEEEEeccCcEeccccCC
Confidence            99999999999999999999999999999885 999999999999987664

>d2fr1a1 c.2.1.2 (A:1657-1915) Erythromycin synthase, eryAI, 1st ketoreductase module {Saccharopolyspora erythraea [TaxId: 1836]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Erythromycin synthase, eryAI, 1st ketoreductase module
species: Saccharopolyspora erythraea [TaxId: 1836]

Probab=99.97  E-value=8.8e-31  Score=218.05  Aligned_cols=177  Identities=21%  Similarity=0.248  Sum_probs=152.8

Q ss_pred             CCEEEEcCCCChHHHHHHHHHHHcCC-eEEEEeCCc---chHHHHHHHHHhhCCCcEEEEEccCCCHHHHHHHHHHHHhH
Q 044010           47 GKVVIITGASSGIGEHLAYEYARRGA-CLALCARRE---KSLEEVADTAREIGSPDVITIRADVSKVDDCRSLVEETMNH  122 (248)
Q Consensus        47 ~k~~lVtGg~~gIG~aia~~l~~~G~-~V~l~~r~~---~~~~~~~~~l~~~~~~~v~~~~~D~~~~~~~~~~~~~~~~~  122 (248)
                      ++++|||||++|||+++|++|+++|+ +|++++|+.   +..++..+++++.+ .++.++.||++|.++++++++++.+.
T Consensus         9 ~gt~lVTGgs~GIG~a~a~~la~~Ga~~vvl~~R~~~~~~~~~~~~~~l~~~g-~~v~~~~~Dv~d~~~~~~~~~~i~~~   87 (259)
T d2fr1a1           9 TGTVLVTGGTGGVGGQIARWLARRGAPHLLLVSRSGPDADGAGELVAELEALG-ARTTVAACDVTDRESVRELLGGIGDD   87 (259)
T ss_dssp             CSEEEEETTTSHHHHHHHHHHHHHTCSEEEEEESSGGGSTTHHHHHHHHHHTT-CEEEEEECCTTCHHHHHHHHHTSCTT
T ss_pred             cCEEEEECCCcHHHHHHHHHHHHCCCCEEEEEeCCccCHHHHHHHHHHHHhcc-ccccccccccchHHHHHHhhcccccc
Confidence            56999999999999999999999999 699999974   44566666776655 48999999999999999999988654


Q ss_pred             cCCccEEEEccccCCcccccccCChHHHHHHHHhhhHHHHHHHHHHhhhhhhcCCeEEEEcCccccccCCCCccchHHHH
Q 044010          123 FGRLDHLVNNAGISSVALFEDIVNITDFKQIMNINFWGSVYTTRFAVPHLRYTKGKIVVLSSAASWLTAPRMSFYNASKA  202 (248)
Q Consensus       123 ~g~id~vv~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~g~iV~isS~~~~~~~~~~~~Y~~sKa  202 (248)
                       +++|.++||+|.....++.+ .+.++|++.+++|+.+++++.+.+.+   ...+++|++||.++..+.+++++|+++|+
T Consensus        88 -~~i~~vv~~ag~~~~~~~~~-~~~~~~~~~~~~~~~g~~~l~~~~~~---~~~~~iv~~SS~a~~~g~~~~~~YaAaka  162 (259)
T d2fr1a1          88 -VPLSAVFHAAATLDDGTVDT-LTGERIERASRAKVLGARNLHELTRE---LDLTAFVLFSSFASAFGAPGLGGYAPGNA  162 (259)
T ss_dssp             -SCEEEEEECCCCCCCCCGGG-CCHHHHHHHTHHHHHHHHHHHHHHTT---SCCSEEEEEEEHHHHTCCTTCTTTHHHHH
T ss_pred             -cccccccccccccccccccc-ccHHHHHHHhhhhccchhHHHHHhhc---cCCceEeeecchhhccCCcccHHHHHHHH
Confidence             68999999999998887776 57899999999999999998887543   24589999999999999999999999999


Q ss_pred             HHHHHHHHHHHHhCCCeEEEEEecCccccC
Q 044010          203 ALVLFFETLRVELGSDVGVTIVTPGFIESE  232 (248)
Q Consensus       203 al~~l~~~la~~~~~~i~v~~v~pg~v~T~  232 (248)
                      ++++|++.++.+   ++++++|+||++.++
T Consensus       163 ~l~~la~~~~~~---Gi~v~~I~pg~~~~~  189 (259)
T d2fr1a1         163 YLDGLAQQRRSD---GLPATAVAWGTWAGS  189 (259)
T ss_dssp             HHHHHHHHHHHT---TCCCEEEEECCBC--
T ss_pred             hHHHHHHHHHhC---CCCEEECCCCcccCC
Confidence            999998888765   599999999998643

>d1fjha_ c.2.1.2 (A:) 3-alpha-hydroxysteroid dehydrogenase {Comamonas testosteroni [TaxId: 285]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: 3-alpha-hydroxysteroid dehydrogenase
species: Comamonas testosteroni [TaxId: 285]

Probab=99.95  E-value=1.2e-27  Score=198.32  Aligned_cols=167  Identities=22%  Similarity=0.324  Sum_probs=124.6

Q ss_pred             CEEEEcCCCChHHHHHHHHHHHcCCeEEEEeCCcchHHHHHHHHHhhCCCcEEEEEccCCCHHHHHHHHHHHHhHc-CCc
Q 044010           48 KVVIITGASSGIGEHLAYEYARRGACLALCARREKSLEEVADTAREIGSPDVITIRADVSKVDDCRSLVEETMNHF-GRL  126 (248)
Q Consensus        48 k~~lVtGg~~gIG~aia~~l~~~G~~V~l~~r~~~~~~~~~~~l~~~~~~~v~~~~~D~~~~~~~~~~~~~~~~~~-g~i  126 (248)
                      |++|||||++|||+++|++|+++|++|++++|++++                  ..+|+++.+..+....+...+. +.+
T Consensus         2 kVvlITGas~GIG~aiA~~la~~Ga~V~~~~~~~~~------------------~~~d~~~~~~~~~~~~~~~~~~~~~i   63 (257)
T d1fjha_           2 SIIVISGCATGIGAATRKVLEAAGHQIVGIDIRDAE------------------VIADLSTAEGRKQAIADVLAKCSKGM   63 (257)
T ss_dssp             CEEEEETTTSHHHHHHHHHHHHTTCEEEEEESSSSS------------------EECCTTSHHHHHHHHHHHHTTCTTCC
T ss_pred             CEEEEeCCCCHHHHHHHHHHHHCCCEEEEEECChHH------------------HHHHhcCHHHHHHHHHHHHHHhCCCC
Confidence            789999999999999999999999999999997642                  3579999999888877766654 579


Q ss_pred             cEEEEccccCCcccccccCChHHHHHHHHhhhHHHHHHHHHHhhhhhhcC-CeEEEEcCcccc-----------------
Q 044010          127 DHLVNNAGISSVALFEDIVNITDFKQIMNINFWGSVYTTRFAVPHLRYTK-GKIVVLSSAASW-----------------  188 (248)
Q Consensus       127 d~vv~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~-g~iV~isS~~~~-----------------  188 (248)
                      |+++||||....        .+.+.+...+|..+...+.+...+.+.+.. ....++++....                 
T Consensus        64 d~lv~~Ag~~~~--------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~  135 (257)
T d1fjha_          64 DGLVLCAGLGPQ--------TKVLGNVVSVNYFGATELMDAFLPALKKGHQPAAVVISSVASAHLAFDKNPLALALEAGE  135 (257)
T ss_dssp             SEEEECCCCCTT--------CSSHHHHHHHHTHHHHHHHHHHHHHHHTSSSCEEEEECCGGGGSSCGGGCTTHHHHHHTC
T ss_pred             cEEEEcCCCCCc--------HHHHHHHHHHHHHHHHHHHHHhhhhhhhhccCcceeeeeccccchhhhhhhhhhhccCCc
Confidence            999999997542        245677888999999999999888765433 455555443322                 


Q ss_pred             ----------cc-CCCCccchHHHHHHHHHHHHHHHHhCCC-eEEEEEecCccccCcccccccc
Q 044010          189 ----------LT-APRMSFYNASKAALVLFFETLRVELGSD-VGVTIVTPGFIESELTQGKFLT  240 (248)
Q Consensus       189 ----------~~-~~~~~~Y~~sKaal~~l~~~la~~~~~~-i~v~~v~pg~v~T~~~~~~~~~  240 (248)
                                .+ .++..+|++||+|+++|+|++|.|++++ ||||+|+||+++|++.+..+.+
T Consensus       136 ~~~i~s~~~~~~~~~~~~~Y~asKaal~~ltr~lA~el~~~gIrVN~I~PG~i~T~~~~~~~~~  199 (257)
T d1fjha_         136 EAKARAIVEHAGEQGGNLAYAGSKNALTVAVRKRAAAWGEAGVRLNTIAPGATETPLLQAGLQD  199 (257)
T ss_dssp             HHHHHHHHHTCCTTHHHHHHHHHHHHHHHHHHHTHHHHHHTTCEEEEEEECC------------
T ss_pred             EEEEeeehhccCCCcchHHHHHHhhhhhccccccccccccccccccccccCCcCChhHHhhcCC
Confidence                      11 1223479999999999999999999885 9999999999999998876544

>d1luaa1 c.2.1.7 (A:98-288) Methylene-tetrahydromethanopterin dehydrogenase {Methylobacterium extorquens [TaxId: 408]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Aminoacid dehydrogenase-like, C-terminal domain
domain: Methylene-tetrahydromethanopterin dehydrogenase
species: Methylobacterium extorquens [TaxId: 408]

Probab=99.83  E-value=6.3e-22  Score=156.98  Aligned_cols=155  Identities=14%  Similarity=0.103  Sum_probs=116.0

Q ss_pred             ccCCCCCEEEEcCCCChHHHHHHHHHHHcCCeEEEEeCCcchHHHHHHHHHhhCCCcEEEEEccCCCHHHHHHHHHHHHh
Q 044010           42 SEDVSGKVVIITGASSGIGEHLAYEYARRGACLALCARREKSLEEVADTAREIGSPDVITIRADVSKVDDCRSLVEETMN  121 (248)
Q Consensus        42 ~~~~~~k~~lVtGg~~gIG~aia~~l~~~G~~V~l~~r~~~~~~~~~~~l~~~~~~~v~~~~~D~~~~~~~~~~~~~~~~  121 (248)
                      ..+++||+++||||++|||+++|++|+++|++|++++|+.++.++..+++.+..  ++....+|+++.+++++++     
T Consensus        18 ~~~l~gK~vlItGasgGIG~~ia~~la~~G~~V~~~~r~~~~~~~~~~~~~~~~--~~~~~~~d~~~~~~~~~~~-----   90 (191)
T d1luaa1          18 GGSVKGKKAVVLAGTGPVGMRSAALLAGEGAEVVLCGRKLDKAQAAADSVNKRF--KVNVTAAETADDASRAEAV-----   90 (191)
T ss_dssp             TSCCTTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESSHHHHHHHHHHHHHHH--TCCCEEEECCSHHHHHHHT-----
T ss_pred             CCCCCCCEEEEECCCHHHHHHHHHHHHhhccchhhcccchHHHHHHHHHHHhcc--chhhhhhhcccHHHHHHHh-----
Confidence            458999999999999999999999999999999999999999999988887654  3456889999999887765     


Q ss_pred             HcCCccEEEEccccCCcccccccCChHHHHHHHHhhhHHHHHHHHHHhhhhhhcCCeEEEEcCccccccC-CCCccchHH
Q 044010          122 HFGRLDHLVNNAGISSVALFEDIVNITDFKQIMNINFWGSVYTTRFAVPHLRYTKGKIVVLSSAASWLTA-PRMSFYNAS  200 (248)
Q Consensus       122 ~~g~id~vv~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~g~iV~isS~~~~~~~-~~~~~Y~~s  200 (248)
                        +++|++|||||....     ..+.++|++.+++|+.+.++....+.+.+.........+++..++.+. .+...|+++
T Consensus        91 --~~iDilin~Ag~g~~-----~~~~e~~~~~~~~nv~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~g~~~y~~s  163 (191)
T d1luaa1          91 --KGAHFVFTAGAIGLE-----LLPQAAWQNESSIEIVADYNAQPPLGIGGIDATDKGKEYGGKRAFGALGIGGLKLKLH  163 (191)
T ss_dssp             --TTCSEEEECCCTTCC-----CBCHHHHHTCTTCCEEEECCCSSSCSBTTCCTTCEEEEETTEEEECHHHHHHHHHHHH
T ss_pred             --cCcCeeeecCccccc-----cCCHHHHHhhhcceeehhHhhHHHHHHHhhhhccCcEEecceEEEeccCcCcHHHHHH
Confidence              579999999997432     146799999999998887766555444332222222333322222111 123469999


Q ss_pred             HHHHHHHHHH
Q 044010          201 KAALVLFFET  210 (248)
Q Consensus       201 Kaal~~l~~~  210 (248)
                      |+++..|.++
T Consensus       164 k~a~~~l~~s  173 (191)
T d1luaa1         164 RACIAKLFES  173 (191)
T ss_dssp             HHHHHHHTSC
T ss_pred             HHHHHHHHhc
Confidence            9999887643

>d1db3a_ c.2.1.2 (A:) GDP-mannose 4,6-dehydratase {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: GDP-mannose 4,6-dehydratase
species: Escherichia coli [TaxId: 562]

Probab=99.83  E-value=1.4e-19  Score=156.24  Aligned_cols=173  Identities=18%  Similarity=0.108  Sum_probs=128.2

Q ss_pred             CCEEEEcCCCChHHHHHHHHHHHcCCeEEEEeCCcch-----HHHHHHHHHhhCCCcEEEEEccCCCHHHHHHHHHHHHh
Q 044010           47 GKVVIITGASSGIGEHLAYEYARRGACLALCARREKS-----LEEVADTAREIGSPDVITIRADVSKVDDCRSLVEETMN  121 (248)
Q Consensus        47 ~k~~lVtGg~~gIG~aia~~l~~~G~~V~l~~r~~~~-----~~~~~~~l~~~~~~~v~~~~~D~~~~~~~~~~~~~~~~  121 (248)
                      .|+||||||+|.||.+++++|+++|++|+.++|....     .+....+.. ....++.++.+|++|.++++++++..  
T Consensus         1 ~K~vLITGatGfiGs~lv~~Ll~~g~~V~~~~r~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~Dl~d~~~~~~~~~~~--   77 (357)
T d1db3a_           1 SKVALITGVTGQDGSYLAEFLLEKGYEVHGIKRRASSFNTERVDHIYQDPH-TCNPKFHLHYGDLSDTSNLTRILREV--   77 (357)
T ss_dssp             CCEEEEETTTSHHHHHHHHHHHHTTCEEEEECC----------------------CCEEECCCCSSCHHHHHHHHHHH--
T ss_pred             CCEEEEeCCCcHHHHHHHHHHHHCcCEEEEEECCCcccchhhHHHHHhhhh-hcCCCeEEEEeecCCHHHHHHHHhcc--
Confidence            3899999999999999999999999999999995432     222222111 12347899999999999999999875  


Q ss_pred             HcCCccEEEEccccCCcccccccCChHHHHHHHHhhhHHHHHHHHHHhhhhhhcCCeEEEEcCcccccc-----------
Q 044010          122 HFGRLDHLVNNAGISSVALFEDIVNITDFKQIMNINFWGSVYTTRFAVPHLRYTKGKIVVLSSAASWLT-----------  190 (248)
Q Consensus       122 ~~g~id~vv~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~g~iV~isS~~~~~~-----------  190 (248)
                         ++|+++|.|+......     +.++....+++|+.++.++++++...-.+...++|++||.+.+..           
T Consensus        78 ---~~d~v~h~aa~~~~~~-----~~~~~~~~~~~Nv~gt~nllea~~~~~~~~~~r~i~~SS~~vYG~~~~~~~~E~~~  149 (357)
T d1db3a_          78 ---QPDEVYNLGAMSHVAV-----SFESPEYTADVDAMGTLRLLEAIRFLGLEKKTRFYQASTSELYGLVQEIPQKETTP  149 (357)
T ss_dssp             ---CCSEEEECCCCCTTTT-----TTSCHHHHHHHHTHHHHHHHHHHHHTTCTTTCEEEEEEEGGGGTTCCSSSBCTTSC
T ss_pred             ---CCCEEEEeecccccch-----hhhCHHHHHHHHHHHHHHHHHHHHHhCCCCCcEEEEEEchhhhCCCCCCCcCCCCC
Confidence               7999999999865442     335566788999999999999987543234468999999765421           


Q ss_pred             CCCCccchHHHHHHHHHHHHHHHHhCCCeEEEEEecCccccC
Q 044010          191 APRMSFYNASKAALVLFFETLRVELGSDVGVTIVTPGFIESE  232 (248)
Q Consensus       191 ~~~~~~Y~~sKaal~~l~~~la~~~~~~i~v~~v~pg~v~T~  232 (248)
                      ..+...|+.||.+.+.+++.+++.++  +.+..+.|+.+..|
T Consensus       150 ~~P~~~Y~~sK~~~E~~~~~~~~~~~--l~~~ilR~~~vyGp  189 (357)
T d1db3a_         150 FYPRSPYAVAKLYAYWITVNYRESYG--MYACNGILFNHESP  189 (357)
T ss_dssp             CCCCSHHHHHHHHHHHHHHHHHHHHC--CCEEEEEECCEECT
T ss_pred             CCCCChHHHHHHHHHHHHHHHHHHhC--CCEEEEEeccccCC
Confidence            12345799999999999999999874  66667777766555

>d1z45a2 c.2.1.2 (A:11-357) Uridine diphosphogalactose-4-epimerase (UDP-galactose 4-epimerase) {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Uridine diphosphogalactose-4-epimerase (UDP-galactose 4-epimerase)
species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]

Probab=99.78  E-value=5e-18  Score=145.57  Aligned_cols=172  Identities=17%  Similarity=0.152  Sum_probs=127.3

Q ss_pred             CCEEEEcCCCChHHHHHHHHHHHcCCeEEEEeCCcchHHHHHHHHHhhCCCcEEEEEccCCCHHHHHHHHHHHHhHcCCc
Q 044010           47 GKVVIITGASSGIGEHLAYEYARRGACLALCARREKSLEEVADTAREIGSPDVITIRADVSKVDDCRSLVEETMNHFGRL  126 (248)
Q Consensus        47 ~k~~lVtGg~~gIG~aia~~l~~~G~~V~l~~r~~~~~~~~~~~l~~~~~~~v~~~~~D~~~~~~~~~~~~~~~~~~g~i  126 (248)
                      .|++|||||+|.||.+++++|+++|++|+++++......+...........++.++.+|++|.++++++++..     ++
T Consensus         1 ~K~ILVTGatGfIG~~lv~~Ll~~g~~V~~~d~~~~~~~~~~~~~~~~~~~~v~~~~~Dl~d~~~l~~~~~~~-----~~   75 (347)
T d1z45a2           1 SKIVLVTGGAGYIGSHTVVELIENGYDCVVADNLSNSTYDSVARLEVLTKHHIPFYEVDLCDRKGLEKVFKEY-----KI   75 (347)
T ss_dssp             CCEEEEETTTSHHHHHHHHHHHHTTCEEEEEECCSSCCTHHHHHHHHHHTSCCCEEECCTTCHHHHHHHHHHS-----CC
T ss_pred             CCEEEEeCCCcHHHHHHHHHHHHCcCeEEEEECCCCcchhHHHhHHhhcccCCeEEEeecCCHHHHHHHHhcc-----CC
Confidence            3789999999999999999999999999999874332222222222223347889999999999999988753     79


Q ss_pred             cEEEEccccCCcccccccCChHHHHHHHHhhhHHHHHHHHHHhhhhhhcCCeEEEEcCccccccC---------------
Q 044010          127 DHLVNNAGISSVALFEDIVNITDFKQIMNINFWGSVYTTRFAVPHLRYTKGKIVVLSSAASWLTA---------------  191 (248)
Q Consensus       127 d~vv~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~g~iV~isS~~~~~~~---------------  191 (248)
                      |+|+|.|+...+..     ..++......+|+.++.++++.+...   ...++|++||...+...               
T Consensus        76 d~VihlAa~~~~~~-----~~~~~~~~~~~N~~~t~~ll~~~~~~---~i~~~i~~SS~~vyg~~~~~~~~~~~~e~~~~  147 (347)
T d1z45a2          76 DSVIHFAGLKAVGE-----STQIPLRYYHNNILGTVVLLELMQQY---NVSKFVFSSSATVYGDATRFPNMIPIPEECPL  147 (347)
T ss_dssp             CEEEECCSCCCHHH-----HHHSHHHHHHHHHHHHHHHHHHHHHH---TCCEEEEEEEGGGGCCGGGSTTCCSBCTTSCC
T ss_pred             CEEEEccccccccc-----cccCcccccccchhhhHHHHHHHHhc---ccceEEeecceeeecCcccCCCCCccccccCC
Confidence            99999999765332     22444677889999999999997543   22489999997765321               


Q ss_pred             CCCccchHHHHHHHHHHHHHHHHhCCCeEEEEEecCcccc
Q 044010          192 PRMSFYNASKAALVLFFETLRVELGSDVGVTIVTPGFIES  231 (248)
Q Consensus       192 ~~~~~Y~~sKaal~~l~~~la~~~~~~i~v~~v~pg~v~T  231 (248)
                      .+...|+.||.+.+.+.+.+..+...++++..+.|+.+-.
T Consensus       148 ~p~~~Y~~sK~~~E~~~~~~~~~~~~~~~~~~lR~~~v~g  187 (347)
T d1z45a2         148 GPTNPYGHTKYAIENILNDLYNSDKKSWKFAILRYFNPIG  187 (347)
T ss_dssp             CCCSHHHHHHHHHHHHHHHHHHHSTTSCEEEEEEECEEEC
T ss_pred             CCCChhHhHHHHHHHHHHHHHHhhccCCcEEEEeecceEe
Confidence            1235699999999999999988765556666666655443

>d1udca_ c.2.1.2 (A:) Uridine diphosphogalactose-4-epimerase (UDP-galactose 4-epimerase) {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Uridine diphosphogalactose-4-epimerase (UDP-galactose 4-epimerase)
species: Escherichia coli [TaxId: 562]

Probab=99.77  E-value=7.5e-18  Score=143.99  Aligned_cols=171  Identities=16%  Similarity=0.186  Sum_probs=128.6

Q ss_pred             EEEEcCCCChHHHHHHHHHHHcCCeEEEEeCCcchHHHHHHHHHhhCCCcEEEEEccCCCHHHHHHHHHHHHhHcCCccE
Q 044010           49 VVIITGASSGIGEHLAYEYARRGACLALCARREKSLEEVADTAREIGSPDVITIRADVSKVDDCRSLVEETMNHFGRLDH  128 (248)
Q Consensus        49 ~~lVtGg~~gIG~aia~~l~~~G~~V~l~~r~~~~~~~~~~~l~~~~~~~v~~~~~D~~~~~~~~~~~~~~~~~~g~id~  128 (248)
                      ++|||||+|.||.++++.|+++|++|++++|.....+......+.....++.++++|++|.+.+.++++..     ++|+
T Consensus         2 KiLItG~tGfIG~~l~~~L~~~g~~V~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~l~~~~~~~-----~~d~   76 (338)
T d1udca_           2 RVLVTGGSGYIGSHTCVQLLQNGHDVIILDNLCNSKRSVLPVIERLGGKHPTFVEGDIRNEALMTEILHDH-----AIDT   76 (338)
T ss_dssp             EEEEETTTSHHHHHHHHHHHHTTCEEEEEECCSSCCTTHHHHHHHHHTSCCEEEECCTTCHHHHHHHHHHT-----TCSE
T ss_pred             EEEEECCCCHHHHHHHHHHHHCcCEEEEEECCCCcchhhHHHHHhhcCCCCEEEEeecCCHHHHHHHHhcc-----CCCE
Confidence            49999999999999999999999999999874433233333333333347889999999999999988863     7999


Q ss_pred             EEEccccCCcccccccCChHHHHHHHHhhhHHHHHHHHHHhhhhhhcCCeEEEEcCccccccCC------------CCcc
Q 044010          129 LVNNAGISSVALFEDIVNITDFKQIMNINFWGSVYTTRFAVPHLRYTKGKIVVLSSAASWLTAP------------RMSF  196 (248)
Q Consensus       129 vv~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~g~iV~isS~~~~~~~~------------~~~~  196 (248)
                      |||.|+.....     .+.++..+.+++|+.|+.++++++...   .-.++|++||.+.+.+.+            +...
T Consensus        77 ViHlAa~~~~~-----~~~~~~~~~~~~Nv~gt~nlL~~~~~~---~v~~~i~~Ss~~vy~~~~~~~~~e~~~~~~p~~~  148 (338)
T d1udca_          77 VIHFAGLKAVG-----ESVQKPLEYYDNNVNGTLRLISAMRAA---NVKNFIFSSSATVYGDQPKIPYVESFPTGTPQSP  148 (338)
T ss_dssp             EEECCSCCCHH-----HHHHCHHHHHHHHHHHHHHHHHHHHHH---TCCEEEEEEEGGGGCSCCSSSBCTTSCCCCCSSH
T ss_pred             EEECCCccchh-----hHHhCHHHHHHhHHHHHHHHHHHHHHh---CCCEEEecCcceEEccccccccccccccCCCcch
Confidence            99999965422     123456788999999999999988643   235899999877664321            3457


Q ss_pred             chHHHHHHHHHHHHHHHHhCCCeEEEEEecCccccCc
Q 044010          197 YNASKAALVLFFETLRVELGSDVGVTIVTPGFIESEL  233 (248)
Q Consensus       197 Y~~sKaal~~l~~~la~~~~~~i~v~~v~pg~v~T~~  233 (248)
                      |+.+|.+.+.+.+..+.+.. ++.+..+.|+.+-.+.
T Consensus       149 Y~~sK~~~e~~~~~~~~~~~-~~~~~ilR~~~v~G~~  184 (338)
T d1udca_         149 YGKSKLMVEQILTDLQKAQP-DWSIALLRYFNPVGAH  184 (338)
T ss_dssp             HHHHHHHHHHHHHHHHHHST-TCEEEEEEECEEECCC
T ss_pred             HHHHHhhhhHHHHHHHhhcc-CCeEEEEeeccEEecc
Confidence            99999999999998877753 3566667777666543

>d1i24a_ c.2.1.2 (A:) Sulfolipid biosynthesis protein SQD1 {Thale cress (Arabidopsis thaliana) [TaxId: 3702]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Sulfolipid biosynthesis protein SQD1
species: Thale cress (Arabidopsis thaliana) [TaxId: 3702]

Probab=99.77  E-value=2.8e-17  Score=143.05  Aligned_cols=175  Identities=13%  Similarity=0.097  Sum_probs=129.4

Q ss_pred             CCEEEEcCCCChHHHHHHHHHHHcCCeEEEEeC----------------CcchHHHHHHHHHhhCCCcEEEEEccCCCHH
Q 044010           47 GKVVIITGASSGIGEHLAYEYARRGACLALCAR----------------REKSLEEVADTAREIGSPDVITIRADVSKVD  110 (248)
Q Consensus        47 ~k~~lVtGg~~gIG~aia~~l~~~G~~V~l~~r----------------~~~~~~~~~~~l~~~~~~~v~~~~~D~~~~~  110 (248)
                      |+++|||||+|.||.+++++|+++|++|+++|.                ......+.....+...+.++.++.+|++|.+
T Consensus         1 g~kILVTGatGfiG~~lv~~Ll~~g~~V~~iDnl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~Dl~d~~   80 (393)
T d1i24a_           1 GSRVMVIGGDGYCGWATALHLSKKNYEVCIVDNLVRRLFDHQLGLESLTPIASIHDRISRWKALTGKSIELYVGDICDFE   80 (393)
T ss_dssp             -CEEEEETTTSHHHHHHHHHHHHTTCEEEEEECCHHHHHHHHHTCCCSSCCCCHHHHHHHHHHHHCCCCEEEESCTTSHH
T ss_pred             CCEEEEECCCcHHHHHHHHHHHHCcCEEEEEecCCcccccccccccccccccchHHHHHHHHhhcCCCcEEEEccCCCHH
Confidence            789999999999999999999999999999862                1112233333444444457899999999999


Q ss_pred             HHHHHHHHHHhHcCCccEEEEccccCCcccccccCChHHHHHHHHhhhHHHHHHHHHHhhhhhhcCCeEEEEcCcccccc
Q 044010          111 DCRSLVEETMNHFGRLDHLVNNAGISSVALFEDIVNITDFKQIMNINFWGSVYTTRFAVPHLRYTKGKIVVLSSAASWLT  190 (248)
Q Consensus       111 ~~~~~~~~~~~~~g~id~vv~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~g~iV~isS~~~~~~  190 (248)
                      .++++++..     ++|+|+|.|+........  .+.+.....+++|+.|+.++++.+...-  .+.++++.||...+..
T Consensus        81 ~l~~~~~~~-----~~d~ViHlAa~~~~~~s~--~~~~~~~~~~~~Nv~gt~nll~~~~~~~--~~~~~i~~ss~~~~~~  151 (393)
T d1i24a_          81 FLAESFKSF-----EPDSVVHFGEQRSAPYSM--IDRSRAVYTQHNNVIGTLNVLFAIKEFG--EECHLVKLGTMGEYGT  151 (393)
T ss_dssp             HHHHHHHHH-----CCSEEEECCSCCCHHHHT--SCHHHHHHHHHHHHHHHHHHHHHHHHHC--TTCEEEEECCGGGGCC
T ss_pred             HHHHHHHhh-----cchheecccccccccccc--ccccccccccccccccccHHHHHHHHhc--cccceeeccccccccc
Confidence            999999875     799999999876533211  2456677889999999999999876431  2246777776654321


Q ss_pred             ------------------------CCCCccchHHHHHHHHHHHHHHHHhCCCeEEEEEecCccccC
Q 044010          191 ------------------------APRMSFYNASKAALVLFFETLRVELGSDVGVTIVTPGFIESE  232 (248)
Q Consensus       191 ------------------------~~~~~~Y~~sKaal~~l~~~la~~~~~~i~v~~v~pg~v~T~  232 (248)
                                              ..+...|+.||.+.+.+++.++++++  +++.++.|+.+..+
T Consensus       152 ~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~Y~~sK~~aE~~~~~~~~~~~--l~~~~lR~~~v~G~  215 (393)
T d1i24a_         152 PNIDIEEGYITITHNGRTDTLPYPKQASSFYHLSKVHDSHNIAFTCKAWG--IRATDLNQGVVYGV  215 (393)
T ss_dssp             CSSCBCSSEEEEEETTEEEEEECCCCCCSHHHHHHHHHHHHHHHHHHHHC--CEEEEEEECEEECS
T ss_pred             cccccccccccccccccccccccccccccHHHHHhhhhcccccccccccc--eeeeecccccccCC
Confidence                                    11234699999999999999998875  67777777766554

>d1y1pa1 c.2.1.2 (A:2-343) Aldehyde reductase II {Sporobolomyces salmonicolor [TaxId: 5005]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Aldehyde reductase II
species: Sporobolomyces salmonicolor [TaxId: 5005]

Probab=99.75  E-value=2.1e-17  Score=141.41  Aligned_cols=170  Identities=18%  Similarity=0.197  Sum_probs=129.3

Q ss_pred             CCCEEEEcCCCChHHHHHHHHHHHcCCeEEEEeCCcchHHHHHHHHHhhCCCc-EEEEEccCCCHHHHHHHHHHHHhHcC
Q 044010           46 SGKVVIITGASSGIGEHLAYEYARRGACLALCARREKSLEEVADTAREIGSPD-VITIRADVSKVDDCRSLVEETMNHFG  124 (248)
Q Consensus        46 ~~k~~lVtGg~~gIG~aia~~l~~~G~~V~l~~r~~~~~~~~~~~l~~~~~~~-v~~~~~D~~~~~~~~~~~~~~~~~~g  124 (248)
                      +||++|||||+|.||.+++++|+++|++|+.+.|+..+.+...+........+ ...+..|++|.+++.+++.       
T Consensus        10 ~gk~VlVTG~sGfIGs~l~~~Ll~~G~~V~~~vR~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~-------   82 (342)
T d1y1pa1          10 EGSLVLVTGANGFVASHVVEQLLEHGYKVRGTARSASKLANLQKRWDAKYPGRFETAVVEDMLKQGAYDEVIK-------   82 (342)
T ss_dssp             TTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESSHHHHHHHHHHHHHHSTTTEEEEECSCTTSTTTTTTTTT-------
T ss_pred             CcCEEEEECCCCHHHHHHHHHHHHCcCEEEEEeCCchhHHHHHHhhhccccccccEEEeccccchhhhhhhcc-------
Confidence            58999999999999999999999999999999998876665554443333333 3457799999988776653       


Q ss_pred             CccEEEEccccCCcccccccCChHHHHHHHHhhhHHHHHHHHHHhhhhhhcCCeEEEEcCccccccCC------------
Q 044010          125 RLDHLVNNAGISSVALFEDIVNITDFKQIMNINFWGSVYTTRFAVPHLRYTKGKIVVLSSAASWLTAP------------  192 (248)
Q Consensus       125 ~id~vv~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~g~iV~isS~~~~~~~~------------  192 (248)
                      .+|+++|+++.....        .+....+..|+.++.++++.+...  +...++|++||..+.....            
T Consensus        83 ~~~~v~~~a~~~~~~--------~~~~~~~~~nv~gt~~ll~~~~~~--~~v~~~i~~SS~~~~~~~~~~~~~~~~~e~~  152 (342)
T d1y1pa1          83 GAAGVAHIASVVSFS--------NKYDEVVTPAIGGTLNALRAAAAT--PSVKRFVLTSSTVSALIPKPNVEGIYLDEKS  152 (342)
T ss_dssp             TCSEEEECCCCCSCC--------SCHHHHHHHHHHHHHHHHHHHHTC--TTCCEEEEECCGGGTCCCCTTCCCCEECTTC
T ss_pred             cchhhhhhccccccc--------ccccccccchhhhHHHHHHhhhcc--cccccccccccceeeccCCCCCCCccccccc
Confidence            689999999865421        123456778999999999887643  1235899999976432111            


Q ss_pred             -------------------CCccchHHHHHHHHHHHHHHHHhCCCeEEEEEecCccccC
Q 044010          193 -------------------RMSFYNASKAALVLFFETLRVELGSDVGVTIVTPGFIESE  232 (248)
Q Consensus       193 -------------------~~~~Y~~sKaal~~l~~~la~~~~~~i~v~~v~pg~v~T~  232 (248)
                                         +..+|+.+|.+.+.+++.++++++.++++.++.|+.+-.|
T Consensus       153 ~~~~~~~~~~~~~e~~~~~p~~~Y~~sK~~~E~~~~~~~~~~~~~~~~~~i~p~~v~Gp  211 (342)
T d1y1pa1         153 WNLESIDKAKTLPESDPQKSLWVYAASKTEAELAAWKFMDENKPHFTLNAVLPNYTIGT  211 (342)
T ss_dssp             CCHHHHHHHHHSCTTSTTHHHHHHHHHHHHHHHHHHHHHHHHCCSSEEEEEEESEEECC
T ss_pred             cccccccccccccccCCCCCcCcccchhHhHHHHHHHhhhhcccccccceecccceeCC
Confidence                               1235999999999999999999887788888888877554

>d1t2aa_ c.2.1.2 (A:) GDP-mannose 4,6-dehydratase {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: GDP-mannose 4,6-dehydratase
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.75  E-value=1.9e-17  Score=141.45  Aligned_cols=172  Identities=15%  Similarity=0.050  Sum_probs=124.2

Q ss_pred             CEEEEcCCCChHHHHHHHHHHHcCCeEEEEeCCcc-----hHHHHHHHHHhhCCCcEEEEEccCCCHHHHHHHHHHHHhH
Q 044010           48 KVVIITGASSGIGEHLAYEYARRGACLALCARREK-----SLEEVADTAREIGSPDVITIRADVSKVDDCRSLVEETMNH  122 (248)
Q Consensus        48 k~~lVtGg~~gIG~aia~~l~~~G~~V~l~~r~~~-----~~~~~~~~l~~~~~~~v~~~~~D~~~~~~~~~~~~~~~~~  122 (248)
                      |++|||||+|.||.+++++|+++|++|+.++|...     +.+.............+.++.+|++|.+.+.++++..   
T Consensus         2 KI~LVTG~tGfIG~~l~~~Ll~~g~~V~~i~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~~~~~~~~~---   78 (347)
T d1t2aa_           2 NVALITGITGQDGSYLAEFLLEKGYEVHGIVRRSSSFNTGRIEHLYKNPQAHIEGNMKLHYGDLTDSTCLVKIINEV---   78 (347)
T ss_dssp             CEEEEETTTSHHHHHHHHHHHHTTCEEEEEECCCSSCCCTTTGGGC---------CEEEEECCTTCHHHHHHHHHHH---
T ss_pred             CEEEEecCCcHHHHHHHHHHHHCcCEEEEEECCCcccchhhHHHHhhchhhhccCCcEEEEeecCCchhhHHHHhhc---
Confidence            45599999999999999999999999999999643     1222222222222247899999999999999998875   


Q ss_pred             cCCccEEEEccccCCcccccccCChHHHHHHHHhhhHHHHHHHHHHhhhhhhcCCeEEEEcCccccccC-----------
Q 044010          123 FGRLDHLVNNAGISSVALFEDIVNITDFKQIMNINFWGSVYTTRFAVPHLRYTKGKIVVLSSAASWLTA-----------  191 (248)
Q Consensus       123 ~g~id~vv~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~g~iV~isS~~~~~~~-----------  191 (248)
                        ++++++|.++......     +.++....+++|+.++.++++.+...-..+..++|++||.+.+...           
T Consensus        79 --~~~~v~~~~a~~~~~~-----~~~~~~~~~~~Nv~gt~~ll~~~~~~~~~~~~~~i~~SS~~vyg~~~~~~~~E~~~~  151 (347)
T d1t2aa_          79 --KPTEIYNLGAQSHVKI-----SFDLAEYTADVDGVGTLRLLDAVKTCGLINSVKFYQASTSELYGKVQEIPQKETTPF  151 (347)
T ss_dssp             --CCSEEEECCSCCCHHH-----HHHSHHHHHHHHTHHHHHHHHHHHHTTCTTTCEEEEEEEGGGTCSCSSSSBCTTSCC
T ss_pred             --ccceeeeeeeccccch-----hhccchhhhhhHHHHHHHHHHHHHHcCCCCCcEEEEecchheecCCCCCCCCCCCCC
Confidence              7899999998654332     2344556789999999999988876533334589999997754321           


Q ss_pred             CCCccchHHHHHHHHHHHHHHHHhCCCeEEEEEecCcccc
Q 044010          192 PRMSFYNASKAALVLFFETLRVELGSDVGVTIVTPGFIES  231 (248)
Q Consensus       192 ~~~~~Y~~sKaal~~l~~~la~~~~~~i~v~~v~pg~v~T  231 (248)
                      .+...|+.||.+.+.+++.+++.++  +.+..+.|+.+..
T Consensus       152 ~P~~~Yg~sK~~aE~~~~~~~~~~~--~~~~ilr~~~vyG  189 (347)
T d1t2aa_         152 YPRSPYGAAKLYAYWIVVNFREAYN--LFAVNGILFNHES  189 (347)
T ss_dssp             CCCSHHHHHHHHHHHHHHHHHHHHC--CEEEEEEECCEEC
T ss_pred             CCCCHHHHHHHHHHHHHHHHHHHhC--CCEEEEEecceeC
Confidence            1245799999999999999988875  4555566655444

>d1kewa_ c.2.1.2 (A:) dTDP-glucose 4,6-dehydratase (RmlB) {Streptococcus suis, serotype 2 [TaxId: 1307]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: dTDP-glucose 4,6-dehydratase (RmlB)
species: Streptococcus suis, serotype 2 [TaxId: 1307]

Probab=99.71  E-value=3.6e-17  Score=141.19  Aligned_cols=172  Identities=16%  Similarity=0.119  Sum_probs=124.8

Q ss_pred             EEEEcCCCChHHHHHHHHHHHcCCeEEEEeCCcchHHHHHHHHHhh-CCCcEEEEEccCCCHHHHHHHHHHHHhHcCCcc
Q 044010           49 VVIITGASSGIGEHLAYEYARRGACLALCARREKSLEEVADTAREI-GSPDVITIRADVSKVDDCRSLVEETMNHFGRLD  127 (248)
Q Consensus        49 ~~lVtGg~~gIG~aia~~l~~~G~~V~l~~r~~~~~~~~~~~l~~~-~~~~v~~~~~D~~~~~~~~~~~~~~~~~~g~id  127 (248)
                      ++|||||+|.||.+++++|++.|+++++.-++...... .+.+... ...++.++.+|++|.++++++++..     ++|
T Consensus         2 kILItG~tGfIGs~l~~~L~~~g~~vv~~~d~~~~~~~-~~~~~~~~~~~~~~~~~~Dl~d~~~l~~~~~~~-----~~d   75 (361)
T d1kewa_           2 KILITGGAGFIGSAVVRHIIKNTQDTVVNIDKLTYAGN-LESLSDISESNRYNFEHADICDSAEITRIFEQY-----QPD   75 (361)
T ss_dssp             EEEEESTTSHHHHHHHHHHHHHCSCEEEEEECCCTTCC-GGGGTTTTTCTTEEEEECCTTCHHHHHHHHHHH-----CCS
T ss_pred             EEEEECCCcHHHHHHHHHHHHCCCCEEEEEeCCCcccc-HHHHHhhhhcCCcEEEEccCCCHHHHHHHHHhC-----CCC
Confidence            58999999999999999999999975544332211110 1112111 2247899999999999999988754     799


Q ss_pred             EEEEccccCCcccccccCChHHHHHHHHhhhHHHHHHHHHHhhhhhh------cCCeEEEEcCccccccC----------
Q 044010          128 HLVNNAGISSVALFEDIVNITDFKQIMNINFWGSVYTTRFAVPHLRY------TKGKIVVLSSAASWLTA----------  191 (248)
Q Consensus       128 ~vv~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~------~~g~iV~isS~~~~~~~----------  191 (248)
                      +|||+|+......     +.++....+++|+.++.++++.+...-..      ...++|++||.+.+...          
T Consensus        76 ~VihlAa~~~~~~-----~~~~p~~~~~~N~~gt~nl~~~~~~~~~~~~~~~~~~~~~i~~SS~~vyg~~~~~~~~~~~~  150 (361)
T d1kewa_          76 AVMHLAAESHVDR-----SITGPAAFIETNIVGTYALLEVARKYWSALGEDKKNNFRFHHISTDEVYGDLPHPDEVENSV  150 (361)
T ss_dssp             EEEECCSCCCHHH-----HHHCTHHHHHHHTHHHHHHHHHHHHHHHTSCHHHHHHCEEEEEEEGGGGCCCCCGGGSCTTS
T ss_pred             EEEECccccchhh-----HHhCHHHHHHHHHHHHHHHHHHHHHhhhhhhhcccCceEEEEeccceeeCCCccCCcccccc
Confidence            9999999754321     23445678999999999999998765321      23589999998765321          


Q ss_pred             -----------CCCccchHHHHHHHHHHHHHHHHhCCCeEEEEEecCccccCc
Q 044010          192 -----------PRMSFYNASKAALVLFFETLRVELGSDVGVTIVTPGFIESEL  233 (248)
Q Consensus       192 -----------~~~~~Y~~sKaal~~l~~~la~~~~~~i~v~~v~pg~v~T~~  233 (248)
                                 .+...|+.||.+.+.+++.++.+++  +.+..+.|+.|..|.
T Consensus       151 ~~~~~~e~~~~~p~s~Yg~sK~~~E~~~~~~~~~~~--i~~~~lR~~~vyGp~  201 (361)
T d1kewa_         151 TLPLFTETTAYAPSSPYSASKASSDHLVRAWRRTYG--LPTIVTNCSNNYGPY  201 (361)
T ss_dssp             CCCCBCTTSCCCCCSHHHHHHHHHHHHHHHHHHHHC--CCEEEEEECEEESTT
T ss_pred             CCCCcccCCCCCCCCHHHHHHHHHHHHHHHHHHHhC--CCEEEEecCceECcC
Confidence                       1234599999999999999998884  667777777766543

>d1n7ha_ c.2.1.2 (A:) GDP-mannose 4,6-dehydratase {Thale-cress (Arabidopsis thaliana) [TaxId: 3702]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: GDP-mannose 4,6-dehydratase
species: Thale-cress (Arabidopsis thaliana) [TaxId: 3702]

Probab=99.71  E-value=1.2e-16  Score=135.77  Aligned_cols=175  Identities=18%  Similarity=0.087  Sum_probs=127.2

Q ss_pred             CCEEEEcCCCChHHHHHHHHHHHcCCeEEEEeCCcc-----hHHHHHHHHHhhCCCcEEEEEccCCCHHHHHHHHHHHHh
Q 044010           47 GKVVIITGASSGIGEHLAYEYARRGACLALCARREK-----SLEEVADTAREIGSPDVITIRADVSKVDDCRSLVEETMN  121 (248)
Q Consensus        47 ~k~~lVtGg~~gIG~aia~~l~~~G~~V~l~~r~~~-----~~~~~~~~l~~~~~~~v~~~~~D~~~~~~~~~~~~~~~~  121 (248)
                      .|++|||||+|.||.++++.|+++|++|+.++|..+     +.+.............+.++.+|+++.+++.+.++..  
T Consensus         1 ~k~~LVTGatGfiG~~lv~~Ll~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Di~~~~~~~~~~~~~--   78 (339)
T d1n7ha_           1 RKIALITGITGQDGSYLTEFLLGKGYEVHGLIRRSSNFNTQRINHIYIDPHNVNKALMKLHYADLTDASSLRRWIDVI--   78 (339)
T ss_dssp             CCEEEEETTTSHHHHHHHHHHHHTTCEEEEEECCCSSCCCTTTTTTC--------CCEEEEECCTTCHHHHHHHHHHH--
T ss_pred             CCEEEEeCCccHHHHHHHHHHHHCcCEEEEEECCCcccchhhhhhhhhhhhhccccceEEEEccccCHHHHHHHHhhh--
Confidence            489999999999999999999999999999998532     2222222222223346889999999999999998864  


Q ss_pred             HcCCccEEEEccccCCcccccccCChHHHHHHHHhhhHHHHHHHHHHhhhhhhcC--CeEEEEcCcccccc---------
Q 044010          122 HFGRLDHLVNNAGISSVALFEDIVNITDFKQIMNINFWGSVYTTRFAVPHLRYTK--GKIVVLSSAASWLT---------  190 (248)
Q Consensus       122 ~~g~id~vv~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~--g~iV~isS~~~~~~---------  190 (248)
                         ++|+++|.|+......     +.++....+..|..+...+..++.....+..  .+++..||......         
T Consensus        79 ---~~D~Vih~Aa~~~~~~-----~~~~p~~~~~~n~~~~~~~~~~~~~~~~~~~~~~~~~~~ss~~~~~~~~~~~~E~~  150 (339)
T d1n7ha_          79 ---KPDEVYNLAAQSHVAV-----SFEIPDYTADVVATGALRLLEAVRSHTIDSGRTVKYYQAGSSEMFGSTPPPQSETT  150 (339)
T ss_dssp             ---CCSEEEECCSCCCHHH-----HHHSHHHHHHHHTHHHHHHHHHHHHHHHHHCCCCEEEEEEEGGGGTTSCSSBCTTS
T ss_pred             ---ccchhhhccccccccc-----cccCccccccccccccchhhhhhhhcccccccceeeeecccceecccCCCCCCCCC
Confidence               8999999999765431     2355677888999999999888875543222  35565665544322         


Q ss_pred             -CCCCccchHHHHHHHHHHHHHHHHhCCCeEEEEEecCccccCc
Q 044010          191 -APRMSFYNASKAALVLFFETLRVELGSDVGVTIVTPGFIESEL  233 (248)
Q Consensus       191 -~~~~~~Y~~sKaal~~l~~~la~~~~~~i~v~~v~pg~v~T~~  233 (248)
                       ..+...|+.+|.+.+.+++..++.++  +.+..+.|+.|-.|.
T Consensus       151 ~~~p~~~Y~~sK~~~E~~~~~~~~~~~--~~~~ilR~~~vyGp~  192 (339)
T d1n7ha_         151 PFHPRSPYAASKCAAHWYTVNYREAYG--LFACNGILFNHESPR  192 (339)
T ss_dssp             CCCCCSHHHHHHHHHHHHHHHHHHHHC--CEEEEEEECCEECTT
T ss_pred             CCCCcchhhHHHHHHHHHHHHHHHHhC--CCEEEEEEccccCCC
Confidence             12356899999999999999998874  778888887766553

>d1sb8a_ c.2.1.2 (A:) UDP-N-acetylglucosamine 4-epimerase WbpP {Pseudomonas aeruginosa [TaxId: 287]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: UDP-N-acetylglucosamine 4-epimerase WbpP
species: Pseudomonas aeruginosa [TaxId: 287]

Probab=99.67  E-value=1.6e-15  Score=129.36  Aligned_cols=172  Identities=17%  Similarity=0.150  Sum_probs=126.5

Q ss_pred             CCCCCEEEEcCCCChHHHHHHHHHHHcCCeEEEEeCCcchHHHHHHHHHhh----CCCcEEEEEccCCCHHHHHHHHHHH
Q 044010           44 DVSGKVVIITGASSGIGEHLAYEYARRGACLALCARREKSLEEVADTAREI----GSPDVITIRADVSKVDDCRSLVEET  119 (248)
Q Consensus        44 ~~~~k~~lVtGg~~gIG~aia~~l~~~G~~V~l~~r~~~~~~~~~~~l~~~----~~~~v~~~~~D~~~~~~~~~~~~~~  119 (248)
                      ..+-|++|||||+|.||.+++++|.++|++|+.++|.........+.++..    ....+.++.+|..|........   
T Consensus        13 ~~~~k~iLVTG~tGfIGs~lv~~L~~~g~~V~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~d~~~~~~~~---   89 (341)
T d1sb8a_          13 PAQPKVWLITGVAGFIGSNLLETLLKLDQKVVGLDNFATGHQRNLDEVRSLVSEKQWSNFKFIQGDIRNLDDCNNAC---   89 (341)
T ss_dssp             HHSCCEEEEETTTSHHHHHHHHHHHHTTCEEEEEECCSSCCHHHHHHHHHHSCHHHHTTEEEEECCTTSHHHHHHHH---
T ss_pred             CCCCCEEEEecCCCHHHHHHHHHHHHCcCEEEEEECCCCcchhhHHHHHHhhhhcccCCeeEEeecccccccccccc---
Confidence            345679999999999999999999999999999987433222222222221    1236889999999998765443   


Q ss_pred             HhHcCCccEEEEccccCCcccccccCChHHHHHHHHhhhHHHHHHHHHHhhhhhhcCCeEEEEcCccccccC--------
Q 044010          120 MNHFGRLDHLVNNAGISSVALFEDIVNITDFKQIMNINFWGSVYTTRFAVPHLRYTKGKIVVLSSAASWLTA--------  191 (248)
Q Consensus       120 ~~~~g~id~vv~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~g~iV~isS~~~~~~~--------  191 (248)
                          ...+.++|.++......     +.++....+++|+.|+.++++.+...   ...++|++||...+...        
T Consensus        90 ----~~~~~v~~~~a~~~~~~-----~~~~~~~~~~~Nv~gt~~ll~~~~~~---~~~~~i~~SS~~vyg~~~~~~~~E~  157 (341)
T d1sb8a_          90 ----AGVDYVLHQAALGSVPR-----SINDPITSNATNIDGFLNMLIAARDA---KVQSFTYAASSSTYGDHPGLPKVED  157 (341)
T ss_dssp             ----TTCSEEEECCSCCCHHH-----HHHCHHHHHHHHTHHHHHHHHHHHHT---TCSEEEEEEEGGGGTTCCCSSBCTT
T ss_pred             ----ccccccccccccccccc-----cccCccchhheeehhHHHHHHHHHhc---CCceEEEcccceeeCCCCCCCccCC
Confidence                26889998887654321     34667788999999999999987643   23589999998876432        


Q ss_pred             ---CCCccchHHHHHHHHHHHHHHHHhCCCeEEEEEecCccccC
Q 044010          192 ---PRMSFYNASKAALVLFFETLRVELGSDVGVTIVTPGFIESE  232 (248)
Q Consensus       192 ---~~~~~Y~~sKaal~~l~~~la~~~~~~i~v~~v~pg~v~T~  232 (248)
                         .+...|+.+|.+.+.+++.+++.++  +++..+.|+.+..+
T Consensus       158 ~~~~p~~~Y~~sK~~~E~~~~~~~~~~~--i~~~ilR~~~v~G~  199 (341)
T d1sb8a_         158 TIGKPLSPYAVTKYVNELYADVFSRCYG--FSTIGLRYFNVFGR  199 (341)
T ss_dssp             CCCCCCSHHHHHHHHHHHHHHHHHHHHC--CCCEEEEECCEECT
T ss_pred             CCCCCCCcchHHHHHHHHHHHHHHHHhC--CCeEEEEeceeecc
Confidence               2346899999999999999998875  55666666665543

>d1ek6a_ c.2.1.2 (A:) Uridine diphosphogalactose-4-epimerase (UDP-galactose 4-epimerase) {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Uridine diphosphogalactose-4-epimerase (UDP-galactose 4-epimerase)
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.67  E-value=1.6e-15  Score=129.45  Aligned_cols=170  Identities=17%  Similarity=0.142  Sum_probs=123.4

Q ss_pred             CEEEEcCCCChHHHHHHHHHHHcCCeEEEEeCC------cchHHHHHHHHHhhCCCcEEEEEccCCCHHHHHHHHHHHHh
Q 044010           48 KVVIITGASSGIGEHLAYEYARRGACLALCARR------EKSLEEVADTAREIGSPDVITIRADVSKVDDCRSLVEETMN  121 (248)
Q Consensus        48 k~~lVtGg~~gIG~aia~~l~~~G~~V~l~~r~------~~~~~~~~~~l~~~~~~~v~~~~~D~~~~~~~~~~~~~~~~  121 (248)
                      |++|||||+|.||.+++++|+++|++|+.+++.      ........+.+......++.++.+|++|.+++++++..   
T Consensus         3 kKILITG~tGfIGs~lv~~Ll~~g~~V~~ld~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~l~~~~~~---   79 (346)
T d1ek6a_           3 EKVLVTGGAGYIGSHTVLELLEAGYLPVVIDNFHNAFRGGGSLPESLRRVQELTGRSVEFEEMDILDQGALQRLFKK---   79 (346)
T ss_dssp             SEEEEETTTSHHHHHHHHHHHHTTCCEEEEECSSSSCBCSSSSBHHHHHHHHHHTCCCEEEECCTTCHHHHHHHHHH---
T ss_pred             CeEEEECCCcHHHHHHHHHHHHCcCEEEEEECCCccccccccchHHHHHHHHhcCCCcEEEEeeccccccccccccc---
Confidence            688999999999999999999999999998742      22222233333333345789999999999999888865   


Q ss_pred             HcCCccEEEEccccCCcccccccCChHHHHHHHHhhhHHHHHHHHHHhhhhhhcCCeEEEEcCccccccC----------
Q 044010          122 HFGRLDHLVNNAGISSVALFEDIVNITDFKQIMNINFWGSVYTTRFAVPHLRYTKGKIVVLSSAASWLTA----------  191 (248)
Q Consensus       122 ~~g~id~vv~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~g~iV~isS~~~~~~~----------  191 (248)
                        .++++++|.|+......     +.++..+.+++|+.++.++++++...   .-.++++.||...+...          
T Consensus        80 --~~~~~i~h~Aa~~~~~~-----~~~~p~~~~~~Nv~gt~~l~~~~~~~---~v~~~i~~ss~~~~~~~~~~~~~~~~~  149 (346)
T d1ek6a_          80 --YSFMAVIHFAGLKAVGE-----SVQKPLDYYRVNLTGTIQLLEIMKAH---GVKNLVFSSSATVYGNPQYLPLDEAHP  149 (346)
T ss_dssp             --CCEEEEEECCSCCCHHH-----HHHCHHHHHHHHHHHHHHHHHHHHHT---TCCEEEEEEEGGGGCSCSSSSBCTTSC
T ss_pred             --cccccccccccccCcHh-----hHhCHHHHHHhhhcccccccchhhhc---Ccccccccccceeeecccccccccccc
Confidence              37999999999765432     23445678899999999988886532   22478998887665432          


Q ss_pred             --CCCccchHHHHHHHHHHHHHHHHhCCCeEEEEEecCcccc
Q 044010          192 --PRMSFYNASKAALVLFFETLRVELGSDVGVTIVTPGFIES  231 (248)
Q Consensus       192 --~~~~~Y~~sKaal~~l~~~la~~~~~~i~v~~v~pg~v~T  231 (248)
                        ....+|+.+|.+.+...+.+++... ++....+.|+.+..
T Consensus       150 ~~~~~~~Y~~~k~~~e~~~~~~~~~~~-~~~~~~lR~~~v~G  190 (346)
T d1ek6a_         150 TGGCTNPYGKSKFFIEEMIRDLCQADK-TWNAVLLRYFNPTG  190 (346)
T ss_dssp             CCCCSSHHHHHHHHHHHHHHHHHHHCT-TCEEEEEEECEEEC
T ss_pred             ccccCChHHHHHHHHHHHHHHHHHhcc-CCceEEEeecceec
Confidence              2345799999999999998876542 35555555655544

>d1rpna_ c.2.1.2 (A:) GDP-mannose 4,6-dehydratase {Pseudomonas aeruginosa [TaxId: 287]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: GDP-mannose 4,6-dehydratase
species: Pseudomonas aeruginosa [TaxId: 287]

Probab=99.66  E-value=1.4e-15  Score=128.24  Aligned_cols=169  Identities=16%  Similarity=0.038  Sum_probs=122.5

Q ss_pred             CEEEEcCCCChHHHHHHHHHHHcCCeEEEEeCCcchHHHHHHHHHhhC-CCcEEEEEccCCCHHHHHHHHHHHHhHcCCc
Q 044010           48 KVVIITGASSGIGEHLAYEYARRGACLALCARREKSLEEVADTAREIG-SPDVITIRADVSKVDDCRSLVEETMNHFGRL  126 (248)
Q Consensus        48 k~~lVtGg~~gIG~aia~~l~~~G~~V~l~~r~~~~~~~~~~~l~~~~-~~~v~~~~~D~~~~~~~~~~~~~~~~~~g~i  126 (248)
                      |+||||||+|.||.+++++|+++|++|+.++|......  .+.++... ..++.++.+|++|.+++.+.+...     ..
T Consensus         1 k~vLItG~tGfiG~~l~~~Ll~~g~~V~~~~r~~~~~~--~~~l~~~~~~~~~~~~~~Dl~d~~~~~~~~~~~-----~~   73 (321)
T d1rpna_           1 RSALVTGITGQDGAYLAKLLLEKGYRVHGLVARRSSDT--RWRLRELGIEGDIQYEDGDMADACSVQRAVIKA-----QP   73 (321)
T ss_dssp             CEEEEETTTSHHHHHHHHHHHHTTCEEEEEECCCSSCC--CHHHHHTTCGGGEEEEECCTTCHHHHHHHHHHH-----CC
T ss_pred             CEEEEECCCCHHHHHHHHHHHHCcCEEEEEECCCCccc--HHHHHHhcccCCcEEEEccccChHHhhhhhccc-----cc
Confidence            78999999999999999999999999999998654211  11222222 236899999999999999888875     68


Q ss_pred             cEEEEccccCCcccccccCChHHHHHHHHhhhHHHHHHHHHHhhhhhhcCCeEEEEcCcccccc-----------CCCCc
Q 044010          127 DHLVNNAGISSVALFEDIVNITDFKQIMNINFWGSVYTTRFAVPHLRYTKGKIVVLSSAASWLT-----------APRMS  195 (248)
Q Consensus       127 d~vv~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~g~iV~isS~~~~~~-----------~~~~~  195 (248)
                      ++++|+++......     ..++....+..|+.++.++++.+...-  .+.++++.||...+..           ..+..
T Consensus        74 ~~~~~~a~~~~~~~-----~~~~~~~~~~~n~~g~~~~l~~~~~~~--~~~~~i~~Ss~~~~~~~~~~~~~E~~~~~p~~  146 (321)
T d1rpna_          74 QEVYNLAAQSFVGA-----SWNQPVTTGVVDGLGVTHLLEAIRQFS--PETRFYQASTSEMFGLIQAERQDENTPFYPRS  146 (321)
T ss_dssp             SEEEECCSCCCHHH-----HTTSHHHHHHHHTHHHHHHHHHHHHHC--TTSEEEEEEEGGGGCSCSSSSBCTTSCCCCCS
T ss_pred             cccccccccccccc-----cccchHHHHhhhhhchHHHHHHHHHhC--CCcccccccchhhcCcccCCCCCCCCCccccC
Confidence            88888887654332     123456788899999999988876431  2346777776554321           12346


Q ss_pred             cchHHHHHHHHHHHHHHHHhCCCeEEEEEecCccccC
Q 044010          196 FYNASKAALVLFFETLRVELGSDVGVTIVTPGFIESE  232 (248)
Q Consensus       196 ~Y~~sKaal~~l~~~la~~~~~~i~v~~v~pg~v~T~  232 (248)
                      .|+.+|.+.+.+.+.++.+++  +++..+.|+.+..|
T Consensus       147 ~Y~~sK~~~E~~~~~~~~~~~--~~~~~lr~~~vyGp  181 (321)
T d1rpna_         147 PYGVAKLYGHWITVNYRESFG--LHASSGILFNHESP  181 (321)
T ss_dssp             HHHHHHHHHHHHHHHHHHHHC--CCEEEEEECCEECT
T ss_pred             hhHHHHHHHHHHHHHHHhhcC--CcEEEEEEecccCC
Confidence            899999999999999998875  45555555544443

>d1orra_ c.2.1.2 (A:) CDP-tyvelose-2-epimerase {Salmonella typhi [TaxId: 90370]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: CDP-tyvelose-2-epimerase
species: Salmonella typhi [TaxId: 90370]

Probab=99.66  E-value=4.1e-15  Score=125.68  Aligned_cols=154  Identities=17%  Similarity=0.141  Sum_probs=114.6

Q ss_pred             EEEEcCCCChHHHHHHHHHHHcCCeEEEEeCCcc-hHHHHHHHHHhhCCCcEEEEEccCCCHHHHHHHHHHHHhHcCCcc
Q 044010           49 VVIITGASSGIGEHLAYEYARRGACLALCARREK-SLEEVADTAREIGSPDVITIRADVSKVDDCRSLVEETMNHFGRLD  127 (248)
Q Consensus        49 ~~lVtGg~~gIG~aia~~l~~~G~~V~l~~r~~~-~~~~~~~~l~~~~~~~v~~~~~D~~~~~~~~~~~~~~~~~~g~id  127 (248)
                      ++|||||+|.||.+++++|+++|++|+.+++-.. ...+..+.+...  .+++++.+|++|.+++.++++..     ++|
T Consensus         2 KILVTGatGfIGs~lv~~Ll~~g~~V~~id~~~~~~~~~~~~~~~~~--~~~~~i~~Di~~~~~l~~~~~~~-----~~d   74 (338)
T d1orra_           2 KLLITGGCGFLGSNLASFALSQGIDLIVFDNLSRKGATDNLHWLSSL--GNFEFVHGDIRNKNDVTRLITKY-----MPD   74 (338)
T ss_dssp             EEEEETTTSHHHHHHHHHHHHTTCEEEEEECCCSTTHHHHHHHHHTT--CCCEEEECCTTCHHHHHHHHHHH-----CCS
T ss_pred             EEEEECCCcHHHHHHHHHHHHCcCEEEEEECCCcccchhHHHHhhcc--CCcEEEEcccCCHHHHHHHHHhc-----CCc
Confidence            5899999999999999999999999999876332 222333333332  37889999999999999998865     799


Q ss_pred             EEEEccccCCcccccccCChHHHHHHHHhhhHHHHHHHHHHhhhhhhcCCeEEEEcCccccccC----------------
Q 044010          128 HLVNNAGISSVALFEDIVNITDFKQIMNINFWGSVYTTRFAVPHLRYTKGKIVVLSSAASWLTA----------------  191 (248)
Q Consensus       128 ~vv~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~g~iV~isS~~~~~~~----------------  191 (248)
                      ++||+|+......     ..++....+++|+.|+.++++.+...   ...+.++.||.....+.                
T Consensus        75 ~Vih~aa~~~~~~-----~~~~~~~~~~~Nv~gt~nll~~~~~~---~~~~~i~~sS~~~~~~~~~~~~~~~~~~~~~~~  146 (338)
T d1orra_          75 SCFHLAGQVAMTT-----SIDNPCMDFEINVGGTLNLLEAVRQY---NSNCNIIYSSTNKVYGDLEQYKYNETETRYTCV  146 (338)
T ss_dssp             EEEECCCCCCHHH-----HHHCHHHHHHHHHHHHHHHHHHHHHH---CTTCEEEEEEEGGGGTTCTTSCEEECSSCEEET
T ss_pred             eEEeecccccccc-----cccChHHHHHHHHHHHHHHHHhhhcc---ccccccccccccccccccccccccccccccccc
Confidence            9999999765431     22456788899999999999887643   22345555554433221                


Q ss_pred             ------------CCCccchHHHHHHHHHHHHHHHHhCC
Q 044010          192 ------------PRMSFYNASKAALVLFFETLRVELGS  217 (248)
Q Consensus       192 ------------~~~~~Y~~sKaal~~l~~~la~~~~~  217 (248)
                                  .+...|+.+|...+.+....+..++.
T Consensus       147 ~~~~~~~~~~~~~~~~~y~~~k~~~e~~~~~~~~~~~~  184 (338)
T d1orra_         147 DKPNGYDESTQLDFHSPYGCSKGAADQYMLDYARIFGL  184 (338)
T ss_dssp             TCTTCBCTTSCCCCCHHHHHHHHHHHHHHHHHHHHHCC
T ss_pred             ccccCcccCCccccccccccccchhhhhhhhhhhccCc
Confidence                        12356999999999999999999864

>d1rkxa_ c.2.1.2 (A:) CDP-glucose-4,6-dehydratase {Yersinia pseudotuberculosis [TaxId: 633]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: CDP-glucose-4,6-dehydratase
species: Yersinia pseudotuberculosis [TaxId: 633]

Probab=99.66  E-value=1.9e-15  Score=129.09  Aligned_cols=173  Identities=18%  Similarity=0.160  Sum_probs=129.0

Q ss_pred             CCCCEEEEcCCCChHHHHHHHHHHHcCCeEEEEeCCcchHHHHHHHHHhhCCCcEEEEEccCCCHHHHHHHHHHHHhHcC
Q 044010           45 VSGKVVIITGASSGIGEHLAYEYARRGACLALCARREKSLEEVADTAREIGSPDVITIRADVSKVDDCRSLVEETMNHFG  124 (248)
Q Consensus        45 ~~~k~~lVtGg~~gIG~aia~~l~~~G~~V~l~~r~~~~~~~~~~~l~~~~~~~v~~~~~D~~~~~~~~~~~~~~~~~~g  124 (248)
                      .+||++|||||+|.||.++++.|+++|++|..++|+..+.....+..+.  ...+.++.+|++|.+++.++++..     
T Consensus         6 ~~~KkILVTG~tGfIGs~lv~~Ll~~g~~V~~~~r~~~~~~~~~~~~~~--~~~i~~~~~Dl~d~~~l~~~~~~~-----   78 (356)
T d1rkxa_           6 WQGKRVFVTGHTGFKGGWLSLWLQTMGATVKGYSLTAPTVPSLFETARV--ADGMQSEIGDIRDQNKLLESIREF-----   78 (356)
T ss_dssp             HTTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESSCSSSSCHHHHTTT--TTTSEEEECCTTCHHHHHHHHHHH-----
T ss_pred             hCCCEEEEECCCCHHHHHHHHHHHHCCCEEEEEECCCCccHHHHhhhhc--ccCCeEEEeeccChHhhhhhhhhc-----
Confidence            4789999999999999999999999999999999987655444333321  236889999999999999988765     


Q ss_pred             CccEEEEccccCCcccccccCChHHHHHHHHhhhHHHHHHHHHHhhhhhhcCCeEEEEcCccccccC------------C
Q 044010          125 RLDHLVNNAGISSVALFEDIVNITDFKQIMNINFWGSVYTTRFAVPHLRYTKGKIVVLSSAASWLTA------------P  192 (248)
Q Consensus       125 ~id~vv~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~g~iV~isS~~~~~~~------------~  192 (248)
                      .+|+++|.|+......     +.+..+..+.+|+.++.++++++...  .....+++.||.......            .
T Consensus        79 ~~~~v~~~aa~~~~~~-----~~~~~~~~~~~Nv~g~~n~l~~~~~~--~~~~~~~~~s~~~~~~~~~~~~~~~~~~~~~  151 (356)
T d1rkxa_          79 QPEIVFHMAAQPLVRL-----SYSEPVETYSTNVMGTVYLLEAIRHV--GGVKAVVNITSDKCYDNKEWIWGYRENEAMG  151 (356)
T ss_dssp             CCSEEEECCSCCCHHH-----HHHCHHHHHHHHTHHHHHHHHHHHHH--CCCCEEEEECCGGGBCCCCSSSCBCTTSCBC
T ss_pred             hhhhhhhhhccccccc-----cccCCccccccccccchhhhhhhhcc--ccccccccccccccccccccccccccccccC
Confidence            7999999998654331     23556778899999999999987643  122455555554443211            1


Q ss_pred             CCccchHHHHHHHHHHHHHHHHhC-------CCeEEEEEecCcccc
Q 044010          193 RMSFYNASKAALVLFFETLRVELG-------SDVGVTIVTPGFIES  231 (248)
Q Consensus       193 ~~~~Y~~sKaal~~l~~~la~~~~-------~~i~v~~v~pg~v~T  231 (248)
                      +...|+.+|...+.+++.++.++.       ..+.+....|+.+..
T Consensus       152 p~~~y~~~k~~~e~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~vyG  197 (356)
T d1rkxa_         152 GYDPYSNSKGCAELVTSSYRNSFFNPANYGQHGTAVATVRAGNVIG  197 (356)
T ss_dssp             CSSHHHHHHHHHHHHHHHHHHHHSCGGGHHHHCCEEEEEECCCEEC
T ss_pred             CCCccccccccchhhhhHHhhhcccchhccccCceEEeccCCCeeC
Confidence            345699999999999999888763       136777777776644

>d1e6ua_ c.2.1.2 (A:) GDP-4-keto-6-deoxy-d-mannose epimerase/reductase (GDP-fucose synthetase) {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: GDP-4-keto-6-deoxy-d-mannose epimerase/reductase (GDP-fucose synthetase)
species: Escherichia coli [TaxId: 562]

Probab=99.65  E-value=3.1e-15  Score=125.86  Aligned_cols=153  Identities=16%  Similarity=0.156  Sum_probs=117.5

Q ss_pred             CCCEEEEcCCCChHHHHHHHHHHHcCCeEEEEeCCcchHHHHHHHHHhhCCCcEEEEEccCCCHHHHHHHHHHHHhHcCC
Q 044010           46 SGKVVIITGASSGIGEHLAYEYARRGACLALCARREKSLEEVADTAREIGSPDVITIRADVSKVDDCRSLVEETMNHFGR  125 (248)
Q Consensus        46 ~~k~~lVtGg~~gIG~aia~~l~~~G~~V~l~~r~~~~~~~~~~~l~~~~~~~v~~~~~D~~~~~~~~~~~~~~~~~~g~  125 (248)
                      +.|++|||||+|.||.+++++|+++|+.++++++..                     .+|+++.+.++++++.-     .
T Consensus         1 ~kkkIlITG~tGfiG~~l~~~L~~~g~~vi~~~~~~---------------------~~~~~~~~~~~~~~~~~-----~   54 (315)
T d1e6ua_           1 AKQRVFIAGHRGMVGSAIRRQLEQRGDVELVLRTRD---------------------ELNLLDSRAVHDFFASE-----R   54 (315)
T ss_dssp             CCEEEEEETTTSHHHHHHHHHHTTCTTEEEECCCTT---------------------TCCTTCHHHHHHHHHHH-----C
T ss_pred             CCCEEEEEcCCcHHHHHHHHHHHHCcCEEEEecCch---------------------hccccCHHHHHHHHhhc-----C
Confidence            357899999999999999999999999888765432                     15899999998887642     7


Q ss_pred             ccEEEEccccCCcccccccCChHHHHHHHHhhhHHHHHHHHHHhhhhhhcCCeEEEEcCccccccCC-------------
Q 044010          126 LDHLVNNAGISSVALFEDIVNITDFKQIMNINFWGSVYTTRFAVPHLRYTKGKIVVLSSAASWLTAP-------------  192 (248)
Q Consensus       126 id~vv~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~g~iV~isS~~~~~~~~-------------  192 (248)
                      +|.++|+|+.......    ...+..+.+++|+.++.++++++...   .-.++|++||.+.+.+..             
T Consensus        55 ~d~v~~~a~~~~~~~~----~~~~~~~~~~~Nv~gt~~ll~~a~~~---~v~~~i~~SS~~vyg~~~~~~~~E~~~~~~~  127 (315)
T d1e6ua_          55 IDQVYLAAAKVGGIVA----NNTYPADFIYQNMMIESNIIHAAHQN---DVNKLLFLGSSCIYPKLAKQPMAESELLQGT  127 (315)
T ss_dssp             CSEEEECCCCCCCHHH----HHHCHHHHHHHHHHHHHHHHHHHHHT---TCCEEEEECCGGGSCTTCCSSBCGGGTTSSC
T ss_pred             CCEEEEcchhcccccc----chhhHHHHHHHHHHHHHHHHHHHHHc---CCCEEEEECCceEcCCCCCCCccCCccccCC
Confidence            9999999976543211    22445667888999999999887543   225899999988764321             


Q ss_pred             ---CCccchHHHHHHHHHHHHHHHHhCCCeEEEEEecCccccCc
Q 044010          193 ---RMSFYNASKAALVLFFETLRVELGSDVGVTIVTPGFIESEL  233 (248)
Q Consensus       193 ---~~~~Y~~sKaal~~l~~~la~~~~~~i~v~~v~pg~v~T~~  233 (248)
                         ...+|+.||.+.+.+++.+.++++  +++..+.|+.|..|.
T Consensus       128 ~~~~~~~Y~~sK~~~E~~~~~~~~~~g--l~~~ilR~~~vyGp~  169 (315)
T d1e6ua_         128 LEPTNEPYAIAKIAGIKLCESYNRQYG--RDYRSVMPTNLYGPH  169 (315)
T ss_dssp             CCGGGHHHHHHHHHHHHHHHHHHHHHC--CEEEEEEECEEESTT
T ss_pred             CCCCCCHHHHHHHHHHHHHHHHHHHhC--CCEEEEeeccEECCC
Confidence               123699999999999999999884  778888888776553

>d1oc2a_ c.2.1.2 (A:) dTDP-glucose 4,6-dehydratase (RmlB) {Streptococcus suis, serotype 2 [TaxId: 1307]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: dTDP-glucose 4,6-dehydratase (RmlB)
species: Streptococcus suis, serotype 2 [TaxId: 1307]

Probab=99.64  E-value=5.8e-16  Score=132.41  Aligned_cols=168  Identities=17%  Similarity=0.107  Sum_probs=120.7

Q ss_pred             CCEEEEcCCCChHHHHHHHHHHHcCCeEEEEeCCcchHHHHHHHHHhhCCCcEEEEEccCCCHHHHHHHHHHHHhHcCCc
Q 044010           47 GKVVIITGASSGIGEHLAYEYARRGACLALCARREKSLEEVADTAREIGSPDVITIRADVSKVDDCRSLVEETMNHFGRL  126 (248)
Q Consensus        47 ~k~~lVtGg~~gIG~aia~~l~~~G~~V~l~~r~~~~~~~~~~~l~~~~~~~v~~~~~D~~~~~~~~~~~~~~~~~~g~i  126 (248)
                      -|.+|||||+|.||.+++++|+++|++|.++.++..........+....+.++.++.+|++|.+.+.++++       ..
T Consensus         2 ~mkILVTGgtGfIGs~lv~~L~~~g~~v~v~~~d~~~~~~~~~~~~~~~~~~i~~~~~Di~d~~~~~~~~~-------~~   74 (346)
T d1oc2a_           2 FKNIIVTGGAGFIGSNFVHYVYNNHPDVHVTVLDKLTYAGNKANLEAILGDRVELVVGDIADAELVDKLAA-------KA   74 (346)
T ss_dssp             CSEEEEETTTSHHHHHHHHHHHHHCTTCEEEEEECCCTTCCGGGTGGGCSSSEEEEECCTTCHHHHHHHHT-------TC
T ss_pred             cCEEEEeCCCcHHHHHHHHHHHHCCCCeEEEEEeCCCccccHHHHHHhhcCCeEEEEccCCCHHHHHHHHh-------hh
Confidence            36899999999999999999999998655554431100000111222234589999999999998888764       68


Q ss_pred             cEEEEccccCCcccccccCChHHHHHHHHhhhHHHHHHHHHHhhhhhhcCCeEEEEcCccccccC---------------
Q 044010          127 DHLVNNAGISSVALFEDIVNITDFKQIMNINFWGSVYTTRFAVPHLRYTKGKIVVLSSAASWLTA---------------  191 (248)
Q Consensus       127 d~vv~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~g~iV~isS~~~~~~~---------------  191 (248)
                      |.++|.|+.......     .++..+.+++|+.+..++++.+...    +.++|++||...+...               
T Consensus        75 ~~v~~~a~~~~~~~~-----~~~~~~~~~~N~~g~~nll~~~~~~----~~k~i~~ss~~vyg~~~~~~~~~~~~~~~~~  145 (346)
T d1oc2a_          75 DAIVHYAAESHNDNS-----LNDPSPFIHTNFIGTYTLLEAARKY----DIRFHHVSTDEVYGDLPLREDLPGHGEGPGE  145 (346)
T ss_dssp             SEEEECCSCCCHHHH-----HHCCHHHHHHHTHHHHHHHHHHHHH----TCEEEEEEEGGGGCCBCCGGGSTTTTCSTTS
T ss_pred             hhhhhhhhcccccch-----hhCcccceeeehHhHHhhhhhhccc----cccccccccceEecccCccccccccccCccc
Confidence            889999987654422     2334577889999999999876433    3478888777654321               


Q ss_pred             --------CCCccchHHHHHHHHHHHHHHHHhCCCeEEEEEecCccccC
Q 044010          192 --------PRMSFYNASKAALVLFFETLRVELGSDVGVTIVTPGFIESE  232 (248)
Q Consensus       192 --------~~~~~Y~~sKaal~~l~~~la~~~~~~i~v~~v~pg~v~T~  232 (248)
                              .+...|+.+|.+.+.+++.+.+++  ++++.++.|+.+..|
T Consensus       146 ~~~e~~~~~p~s~Y~~sK~~~E~~~~~~~~~~--~i~~~ilR~~~vyGp  192 (346)
T d1oc2a_         146 KFTAETNYNPSSPYSSTKAASDLIVKAWVRSF--GVKATISNCSNNYGP  192 (346)
T ss_dssp             SBCTTSCCCCCSHHHHHHHHHHHHHHHHHHHH--CCEEEEEEECCEEST
T ss_pred             ccccCCCCCCCCHHHHHHHHHHHHHHHHHHHc--CCCEEEEeecceeCC
Confidence                    123569999999999999999887  478888888877664

>d2b69a1 c.2.1.2 (A:4-315) UDP-glucuronate decarboxylase 1 {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: UDP-glucuronate decarboxylase 1
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.63  E-value=1.3e-15  Score=128.64  Aligned_cols=162  Identities=15%  Similarity=0.153  Sum_probs=115.3

Q ss_pred             CCEEEEcCCCChHHHHHHHHHHHcCCeEEEEeCCcchHHHHHHHHHhhCCCcEEEEEccCCCHHHHHHHHHHHHhHcCCc
Q 044010           47 GKVVIITGASSGIGEHLAYEYARRGACLALCARREKSLEEVADTAREIGSPDVITIRADVSKVDDCRSLVEETMNHFGRL  126 (248)
Q Consensus        47 ~k~~lVtGg~~gIG~aia~~l~~~G~~V~l~~r~~~~~~~~~~~l~~~~~~~v~~~~~D~~~~~~~~~~~~~~~~~~g~i  126 (248)
                      .|++|||||+|.||.+++++|+++|++|+.++|......+.....  ....++.....|..+.            .+.++
T Consensus         1 kKKIlVtG~sGfiG~~lv~~L~~~g~~V~~~d~~~~~~~~~~~~~--~~~~~~d~~~~~~~~~------------~~~~~   66 (312)
T d2b69a1           1 RKRILITGGAGFVGSHLTDKLMMDGHEVTVVDNFFTGRKRNVEHW--IGHENFELINHDVVEP------------LYIEV   66 (312)
T ss_dssp             CCEEEEETTTSHHHHHHHHHHHHTTCEEEEEECCSSCCGGGTGGG--TTCTTEEEEECCTTSC------------CCCCC
T ss_pred             CCEEEEECCCcHHHHHHHHHHHHCcCEEEEEeCCCcCCHHHHHHh--cCCCceEEEehHHHHH------------HHcCC
Confidence            478999999999999999999999999999987432211111111  1122455666665433            12379


Q ss_pred             cEEEEccccCCcccccccCChHHHHHHHHhhhHHHHHHHHHHhhhhhhcCCeEEEEcCccccccC---------------
Q 044010          127 DHLVNNAGISSVALFEDIVNITDFKQIMNINFWGSVYTTRFAVPHLRYTKGKIVVLSSAASWLTA---------------  191 (248)
Q Consensus       127 d~vv~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~g~iV~isS~~~~~~~---------------  191 (248)
                      |+|||.|+.......     .++..+.+++|+.++.++++++..    .+.++|++||.+.+...               
T Consensus        67 d~VihlAa~~~~~~~-----~~~~~~~~~~Nv~g~~~ll~~~~~----~~~k~I~~SS~~vy~~~~~~~~~e~~~~~~~~  137 (312)
T d2b69a1          67 DQIYHLASPASPPNY-----MYNPIKTLKTNTIGTLNMLGLAKR----VGARLLLASTSEVYGDPEVHPQSEDYWGHVNP  137 (312)
T ss_dssp             SEEEECCSCCSHHHH-----TTCHHHHHHHHHHHHHHHHHHHHH----HTCEEEEEEEGGGGBSCSSSSBCTTCCCBCCS
T ss_pred             CEEEECcccCCchhH-----HhCHHHHHHHHHHHHHHHHHHHHH----cCCcEEEEEChheecCCCCCCCCccccCCCCC
Confidence            999999997653321     134567788999999999988643    33589999997665321               


Q ss_pred             -CCCccchHHHHHHHHHHHHHHHHhCCCeEEEEEecCccccCc
Q 044010          192 -PRMSFYNASKAALVLFFETLRVELGSDVGVTIVTPGFIESEL  233 (248)
Q Consensus       192 -~~~~~Y~~sKaal~~l~~~la~~~~~~i~v~~v~pg~v~T~~  233 (248)
                       .+...|+.||.+.+.+++..+++++  +++..+.|+.|..|.
T Consensus       138 ~~p~~~Y~~sK~~~E~~~~~~~~~~~--~~~~~lR~~~vyGp~  178 (312)
T d2b69a1         138 IGPRACYDEGKRVAETMCYAYMKQEG--VEVRVARIFNTFGPR  178 (312)
T ss_dssp             SSTTHHHHHHHHHHHHHHHHHHHHHC--CCEEEEEECCEECTT
T ss_pred             CCCccHHHHHHHHHHHHHHHHHHHhC--CcEEEEEeeeEECCC
Confidence             1345799999999999999999874  777788888876653

>d2blla1 c.2.1.2 (A:316-657) Polymyxin resistance protein ArnA (PrmI) {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Polymyxin resistance protein ArnA (PrmI)
species: Escherichia coli [TaxId: 562]

Probab=99.61  E-value=1.1e-14  Score=124.00  Aligned_cols=161  Identities=16%  Similarity=0.165  Sum_probs=119.1

Q ss_pred             EEEEcCCCChHHHHHHHHHHHcCC-eEEEEeCCcchHHHHHHHHHhhCCCcEEEEEccCCCHHHHHHHHHHHHhHcCCcc
Q 044010           49 VVIITGASSGIGEHLAYEYARRGA-CLALCARREKSLEEVADTAREIGSPDVITIRADVSKVDDCRSLVEETMNHFGRLD  127 (248)
Q Consensus        49 ~~lVtGg~~gIG~aia~~l~~~G~-~V~l~~r~~~~~~~~~~~l~~~~~~~v~~~~~D~~~~~~~~~~~~~~~~~~g~id  127 (248)
                      ++|||||+|.||.+++++|+++|+ +|+.+++..+......      ...++.++.+|+++.+++.+.+.+      ++|
T Consensus         2 KILITG~tGfiG~~l~~~Ll~~g~~~V~~ld~~~~~~~~~~------~~~~~~~i~~Di~~~~~~~~~~~~------~~d   69 (342)
T d2blla1           2 RVLILGVNGFIGNHLTERLLREDHYEVYGLDIGSDAISRFL------NHPHFHFVEGDISIHSEWIEYHVK------KCD   69 (342)
T ss_dssp             EEEEETCSSHHHHHHHHHHHHSTTCEEEEEESCCGGGGGGT------TCTTEEEEECCTTTCSHHHHHHHH------HCS
T ss_pred             EEEEECCCcHHHHHHHHHHHHCCCCEEEEEeCCCcchhhhc------cCCCeEEEECccCChHHHHHHHHh------CCC
Confidence            589999999999999999999994 8998888654333221      124799999999998776554321      599


Q ss_pred             EEEEccccCCcccccccCChHHHHHHHHhhhHHHHHHHHHHhhhhhhcCCeEEEEcCccccccCC---------------
Q 044010          128 HLVNNAGISSVALFEDIVNITDFKQIMNINFWGSVYTTRFAVPHLRYTKGKIVVLSSAASWLTAP---------------  192 (248)
Q Consensus       128 ~vv~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~g~iV~isS~~~~~~~~---------------  192 (248)
                      +++|+|+......     ..++....+.+|+.++.++++.+.    +.+-+.++.||...+...+               
T Consensus        70 ~Vih~a~~~~~~~-----~~~~~~~~~~~nv~gt~~ll~~~~----~~~~~~~~~ss~~~~~~~~~~~~~~~~~~~~~~~  140 (342)
T d2blla1          70 VVLPLVAIATPIE-----YTRNPLRVFELDFEENLRIIRYCV----KYRKRIIFPSTSEVYGMCSDKYFDEDHSNLIVGP  140 (342)
T ss_dssp             EEEECBCCCCHHH-----HHHSHHHHHHHHTHHHHHHHHHHH----HTTCEEEEECCGGGGBTCCCSSBCTTTCCCBCCC
T ss_pred             ccccccccccccc-----cccCCccccccccccccccccccc----cccccccccccccccccccccccccccccccccc
Confidence            9999999765432     224456788999999999999864    3445677887776654321               


Q ss_pred             ---CCccchHHHHHHHHHHHHHHHHhCCCeEEEEEecCccccC
Q 044010          193 ---RMSFYNASKAALVLFFETLRVELGSDVGVTIVTPGFIESE  232 (248)
Q Consensus       193 ---~~~~Y~~sKaal~~l~~~la~~~~~~i~v~~v~pg~v~T~  232 (248)
                         +...|+.||.+.+.+++.+++.++  +++..+.|+.+..+
T Consensus       141 ~~~p~~~Y~~sK~~~E~~~~~~~~~~~--~~~~i~r~~~~~g~  181 (342)
T d2blla1         141 VNKPRWIYSVSKQLLDRVIWAYGEKEG--LQFTLFRPFNWMGP  181 (342)
T ss_dssp             TTCGGGHHHHHHHHHHHHHHHHHHHHC--CCEEEEEECSEECS
T ss_pred             cCCCcchhhhcccchhhhhhhhhcccC--ceeEEeeccccccc
Confidence               124699999999999999999985  56666666666554

>d2c5aa1 c.2.1.2 (A:13-375) GDP-mannose-3', 5'-epimerase {Thale cress (Arabidopsis thaliana) [TaxId: 3702]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: GDP-mannose-3', 5'-epimerase
species: Thale cress (Arabidopsis thaliana) [TaxId: 3702]

Probab=99.59  E-value=1.4e-14  Score=124.22  Aligned_cols=165  Identities=18%  Similarity=0.118  Sum_probs=123.6

Q ss_pred             CCCEEEEcCCCChHHHHHHHHHHHcCCeEEEEeCCcchHHHHHHHHHhhCCCcEEEEEccCCCHHHHHHHHHHHHhHcCC
Q 044010           46 SGKVVIITGASSGIGEHLAYEYARRGACLALCARREKSLEEVADTAREIGSPDVITIRADVSKVDDCRSLVEETMNHFGR  125 (248)
Q Consensus        46 ~~k~~lVtGg~~gIG~aia~~l~~~G~~V~l~~r~~~~~~~~~~~l~~~~~~~v~~~~~D~~~~~~~~~~~~~~~~~~g~  125 (248)
                      ++.++|||||+|.||.+++++|+++|++|+.+++......     ....  ....+..+|+++.+++.++++       +
T Consensus        14 ~nMKILVTGgsGfIGs~lv~~L~~~g~~V~~~d~~~~~~~-----~~~~--~~~~~~~~D~~~~~~~~~~~~-------~   79 (363)
T d2c5aa1          14 ENLKISITGAGGFIASHIARRLKHEGHYVIASDWKKNEHM-----TEDM--FCDEFHLVDLRVMENCLKVTE-------G   79 (363)
T ss_dssp             SCCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESSCCSSS-----CGGG--TCSEEEECCTTSHHHHHHHHT-------T
T ss_pred             CCCEEEEECCCCHHHHHHHHHHHHCcCEEEEEeCCCccch-----hhhc--ccCcEEEeechhHHHHHHHhh-------c
Confidence            5667999999999999999999999999999987543210     0011  145678889999987766553       6


Q ss_pred             ccEEEEccccCCcccccccCChHHHHHHHHhhhHHHHHHHHHHhhhhhhcCCeEEEEcCccccccC--------------
Q 044010          126 LDHLVNNAGISSVALFEDIVNITDFKQIMNINFWGSVYTTRFAVPHLRYTKGKIVVLSSAASWLTA--------------  191 (248)
Q Consensus       126 id~vv~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~g~iV~isS~~~~~~~--------------  191 (248)
                      +|.++|.|+........    .+.....+.+|+.++.+++..+...   ...++|++||...+...              
T Consensus        80 ~d~Vih~a~~~~~~~~~----~~~~~~~~~~n~~gt~~ll~~~~~~---~vk~~i~~SS~~~~~~~~~~~~~~~~~~~~e  152 (363)
T d2c5aa1          80 VDHVFNLAADMGGMGFI----QSNHSVIMYNNTMISFNMIEAARIN---GIKRFFYASSACIYPEFKQLETTNVSLKESD  152 (363)
T ss_dssp             CSEEEECCCCCCCHHHH----TTCHHHHHHHHHHHHHHHHHHHHHT---TCSEEEEEEEGGGSCGGGSSSSSSCEECGGG
T ss_pred             CCeEeeccccccccccc----ccccccccccccchhhHHHHhHHhh---Ccccccccccccccccccccccccccccccc
Confidence            99999999876543221    2445677888999999999887543   22589999998775421              


Q ss_pred             ----CCCccchHHHHHHHHHHHHHHHHhCCCeEEEEEecCccccCc
Q 044010          192 ----PRMSFYNASKAALVLFFETLRVELGSDVGVTIVTPGFIESEL  233 (248)
Q Consensus       192 ----~~~~~Y~~sKaal~~l~~~la~~~~~~i~v~~v~pg~v~T~~  233 (248)
                          .+...|+.+|.+.+.+++.+.++++  +++..+.|+.+..+-
T Consensus       153 ~~~~~p~~~Yg~sK~~~E~~~~~~~~~~g--l~~~ilR~~~vyG~~  196 (363)
T d2c5aa1         153 AWPAEPQDAFGLEKLATEELCKHYNKDFG--IECRIGRFHNIYGPF  196 (363)
T ss_dssp             GSSBCCSSHHHHHHHHHHHHHHHHHHHHC--CEEEEEEECCEECTT
T ss_pred             CCcCCCCCHHHHHHHHHHHHHHHHHHHhC--CCEEEEEeeeEeccC
Confidence                1245799999999999999998874  677778888776643

>d1gy8a_ c.2.1.2 (A:) Uridine diphosphogalactose-4-epimerase (UDP-galactose 4-epimerase) {Trypanosoma brucei [TaxId: 5691]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Uridine diphosphogalactose-4-epimerase (UDP-galactose 4-epimerase)
species: Trypanosoma brucei [TaxId: 5691]

Probab=99.58  E-value=1.1e-13  Score=119.62  Aligned_cols=173  Identities=18%  Similarity=0.142  Sum_probs=124.5

Q ss_pred             CCEEEEcCCCChHHHHHHHHHHH-cCCeEEEEeC---------CcchHHHHHHHHHhh-------CCCcEEEEEccCCCH
Q 044010           47 GKVVIITGASSGIGEHLAYEYAR-RGACLALCAR---------REKSLEEVADTAREI-------GSPDVITIRADVSKV  109 (248)
Q Consensus        47 ~k~~lVtGg~~gIG~aia~~l~~-~G~~V~l~~r---------~~~~~~~~~~~l~~~-------~~~~v~~~~~D~~~~  109 (248)
                      +.++|||||+|.||.+++++|++ .|++|+++++         +.+..+.....+...       .+..+.++.+|++|.
T Consensus         2 ~MKVLITG~tGfIGs~lv~~LL~~~~~~V~~~D~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Di~d~   81 (383)
T d1gy8a_           2 HMRVLVCGGAGYIGSHFVRALLRDTNHSVVIVDSLVGTHGKSDHVETRENVARKLQQSDGPKPPWADRYAALEVGDVRNE   81 (383)
T ss_dssp             CCEEEEETTTSHHHHHHHHHHHHHCCCEEEEEECCTTTTTCCTTSCCHHHHHHHHHHSCSSCCTTTTCCCEEEESCTTCH
T ss_pred             cCEEEEeCCCcHHHHHHHHHHHHhCCCEEEEEecCCcccccchhhhhhhhHHHHhhhhccccccccccceEEEECcccCH
Confidence            44699999999999999999996 6899999874         223333433333322       123578899999999


Q ss_pred             HHHHHHHHHHHhHcCCccEEEEccccCCcccccccCChHHHHHHHHhhhHHHHHHHHHHhhhhhhcCCeEEEEcCccccc
Q 044010          110 DDCRSLVEETMNHFGRLDHLVNNAGISSVALFEDIVNITDFKQIMNINFWGSVYTTRFAVPHLRYTKGKIVVLSSAASWL  189 (248)
Q Consensus       110 ~~~~~~~~~~~~~~g~id~vv~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~g~iV~isS~~~~~  189 (248)
                      +.++++++..    .++|+|+|.|+......     ..++....+++|+.+...+++.+...   ...++++.+|...+.
T Consensus        82 ~~l~~~~~~~----~~~d~ViH~Aa~~~~~~-----~~~~~~~~~~~N~~~t~~~l~~~~~~---~~~~~~~~~s~~~~~  149 (383)
T d1gy8a_          82 DFLNGVFTRH----GPIDAVVHMCAFLAVGE-----SVRDPLKYYDNNVVGILRLLQAMLLH---KCDKIIFSSSAAIFG  149 (383)
T ss_dssp             HHHHHHHHHS----CCCCEEEECCCCCCHHH-----HHHCHHHHHHHHHHHHHHHHHHHHHT---TCCEEEEEEEGGGTB
T ss_pred             HHhhhhhhcc----ceeehhhcccccccccc-----cccccccccccccccccccchhhhcc---CCccccccccccccc
Confidence            9988888653    57999999999765432     22445667889999999999887633   224677776655443


Q ss_pred             c------------------CCCCccchHHHHHHHHHHHHHHHHhCCCeEEEEEecCccccCc
Q 044010          190 T------------------APRMSFYNASKAALVLFFETLRVELGSDVGVTIVTPGFIESEL  233 (248)
Q Consensus       190 ~------------------~~~~~~Y~~sKaal~~l~~~la~~~~~~i~v~~v~pg~v~T~~  233 (248)
                      .                  ..+...|+.+|.+.+.+++.+...++  +.+.++.|+.+..+.
T Consensus       150 ~~~~~~~~~~~~~~~e~~~~~p~~~Y~~sK~~~e~~~~~~~~~~g--l~~~~lR~~~vyG~~  209 (383)
T d1gy8a_         150 NPTMGSVSTNAEPIDINAKKSPESPYGESKLIAERMIRDCAEAYG--IKGICLRYFNACGAH  209 (383)
T ss_dssp             SCCC-----CCCCBCTTSCCBCSSHHHHHHHHHHHHHHHHHHHHC--CEEEEEEECEEECCC
T ss_pred             ccccccccccccccccccCCCCCCHHHhhHhHHHHHHHHHHHHhC--CCEEEEecceeeccC
Confidence            1                  12346799999999999999998875  666667776665443

>d1hdoa_ c.2.1.2 (A:) Biliverdin IX beta reductase {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Biliverdin IX beta reductase
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.58  E-value=2.1e-13  Score=108.03  Aligned_cols=151  Identities=17%  Similarity=0.149  Sum_probs=104.3

Q ss_pred             CCCCEEEEcCCCChHHHHHHHHHHHcCCeEEEEeCCcchHHHHHHHHHhhCCCcEEEEEccCCCHHHHHHHHHHHHhHcC
Q 044010           45 VSGKVVIITGASSGIGEHLAYEYARRGACLALCARREKSLEEVADTAREIGSPDVITIRADVSKVDDCRSLVEETMNHFG  124 (248)
Q Consensus        45 ~~~k~~lVtGg~~gIG~aia~~l~~~G~~V~l~~r~~~~~~~~~~~l~~~~~~~v~~~~~D~~~~~~~~~~~~~~~~~~g  124 (248)
                      |..|+++||||||+||.+++++|+++|++|.++.|+.++...       .....+.++.+|++|.+++.++++       
T Consensus         1 m~~kkIlV~GatG~iG~~v~~~Ll~~g~~V~~~~R~~~~~~~-------~~~~~~~~~~gD~~d~~~l~~al~-------   66 (205)
T d1hdoa_           1 MAVKKIAIFGATGQTGLTTLAQAVQAGYEVTVLVRDSSRLPS-------EGPRPAHVVVGDVLQAADVDKTVA-------   66 (205)
T ss_dssp             CCCCEEEEESTTSHHHHHHHHHHHHTTCEEEEEESCGGGSCS-------SSCCCSEEEESCTTSHHHHHHHHT-------
T ss_pred             CCCCEEEEECCCCHHHHHHHHHHHHCcCEEEEEEcChhhccc-------ccccccccccccccchhhHHHHhc-------
Confidence            567889999999999999999999999999999999876332       223467899999999998887765       


Q ss_pred             CccEEEEccccCCcccccccCChHHHHHHHHhhhHHHHHHHHHHhhhhhhcC-CeEEEEcCccccccCCCC----ccchH
Q 044010          125 RLDHLVNNAGISSVALFEDIVNITDFKQIMNINFWGSVYTTRFAVPHLRYTK-GKIVVLSSAASWLTAPRM----SFYNA  199 (248)
Q Consensus       125 ~id~vv~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~-g~iV~isS~~~~~~~~~~----~~Y~~  199 (248)
                      +.|++|+++|.......      .      +++..+..+++++    +++.+ .++|++||.......+..    ..|..
T Consensus        67 ~~d~vi~~~g~~~~~~~------~------~~~~~~~~~l~~a----a~~~~v~r~i~~ss~~~~~~~~~~~~~~~~~~~  130 (205)
T d1hdoa_          67 GQDAVIVLLGTRNDLSP------T------TVMSEGARNIVAA----MKAHGVDKVVACTSAFLLWDPTKVPPRLQAVTD  130 (205)
T ss_dssp             TCSEEEECCCCTTCCSC------C------CHHHHHHHHHHHH----HHHHTCCEEEEECCGGGTSCTTCSCGGGHHHHH
T ss_pred             CCCEEEEEeccCCchhh------h------hhhHHHHHHHHHH----HHhcCCCeEEEEeeeeccCCCccccccccccch
Confidence            68999999987543211      1      1222334344443    33333 689999987765443332    23455


Q ss_pred             HHHHHHHHHHHHHHHhCCCeEEEEEecCcccc
Q 044010          200 SKAALVLFFETLRVELGSDVGVTIVTPGFIES  231 (248)
Q Consensus       200 sKaal~~l~~~la~~~~~~i~v~~v~pg~v~T  231 (248)
                      .|...+.+.+    +  .+++...|.||.+..
T Consensus       131 ~~~~~e~~l~----~--~~~~~tiirp~~~~~  156 (205)
T d1hdoa_         131 DHIRMHKVLR----E--SGLKYVAVMPPHIGD  156 (205)
T ss_dssp             HHHHHHHHHH----H--TCSEEEEECCSEEEC
T ss_pred             HHHHHHHHHH----h--cCCceEEEecceecC
Confidence            5555444332    1  358888899998754

>d1r6da_ c.2.1.2 (A:) dTDP-glucose 4,6-dehydratase (RmlB) {Streptomyces venezuelae [TaxId: 54571]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: dTDP-glucose 4,6-dehydratase (RmlB)
species: Streptomyces venezuelae [TaxId: 54571]

Probab=99.50  E-value=1.3e-13  Score=116.37  Aligned_cols=165  Identities=18%  Similarity=0.129  Sum_probs=118.2

Q ss_pred             EEEEcCCCChHHHHHHHHHHHcCCeE------EEEeCCcchHH-HHHHHHHhhCCCcEEEEEccCCCHHHHHHHHHHHHh
Q 044010           49 VVIITGASSGIGEHLAYEYARRGACL------ALCARREKSLE-EVADTAREIGSPDVITIRADVSKVDDCRSLVEETMN  121 (248)
Q Consensus        49 ~~lVtGg~~gIG~aia~~l~~~G~~V------~l~~r~~~~~~-~~~~~l~~~~~~~v~~~~~D~~~~~~~~~~~~~~~~  121 (248)
                      ++|||||+|.||.+++++|+++|++|      +..++...... ...+..  ....++.++..|.++........     
T Consensus         2 kIlItG~tGfIG~~l~~~L~~~g~~v~~~~~i~~~d~~~~~~~~~~~~~~--~~~~~~~~~~~d~~~~~~~~~~~-----   74 (322)
T d1r6da_           2 RLLVTGGAGFIGSHFVRQLLAGAYPDVPADEVIVLDSLTYAGNRANLAPV--DADPRLRFVHGDIRDAGLLAREL-----   74 (322)
T ss_dssp             EEEEETTTSHHHHHHHHHHHHTSCTTSCCSEEEEEECCCTTCCGGGGGGG--TTCTTEEEEECCTTCHHHHHHHT-----
T ss_pred             EEEEECCCCHHHHHHHHHHHHCCCCccCCceEEEEeCCCccccHhHhhhh--hcCCCeEEEEeccccchhhhccc-----
Confidence            58999999999999999999998754      33333211100 001111  12247899999999998766443     


Q ss_pred             HcCCccEEEEccccCCcccccccCChHHHHHHHHhhhHHHHHHHHHHhhhhhhcCCeEEEEcCccccccC----------
Q 044010          122 HFGRLDHLVNNAGISSVALFEDIVNITDFKQIMNINFWGSVYTTRFAVPHLRYTKGKIVVLSSAASWLTA----------  191 (248)
Q Consensus       122 ~~g~id~vv~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~g~iV~isS~~~~~~~----------  191 (248)
                        ..+|.++|.|+......     ..+...+.+++|+.++.++++.+...   ...++|+.||...+.+.          
T Consensus        75 --~~~d~vi~~a~~~~~~~-----~~~~~~~~~~~N~~gt~~ll~~~~~~---~~~~~I~~Ss~~~yg~~~~~~~~E~~~  144 (322)
T d1r6da_          75 --RGVDAIVHFAAESHVDR-----SIAGASVFTETNVQGTQTLLQCAVDA---GVGRVVHVSTNQVYGSIDSGSWTESSP  144 (322)
T ss_dssp             --TTCCEEEECCSCCCHHH-----HHHCCHHHHHHHTHHHHHHHHHHHHT---TCCEEEEEEEGGGGCCCSSSCBCTTSC
T ss_pred             --cccceEEeecccccccc-----cccchHHHhhhhHHHHHHHHHHHHHc---CCceEEEeecceeecCCCCCCCCCCCC
Confidence              37999999998765432     22444667789999999999988643   23589999998776432          


Q ss_pred             -CCCccchHHHHHHHHHHHHHHHHhCCCeEEEEEecCccccC
Q 044010          192 -PRMSFYNASKAALVLFFETLRVELGSDVGVTIVTPGFIESE  232 (248)
Q Consensus       192 -~~~~~Y~~sKaal~~l~~~la~~~~~~i~v~~v~pg~v~T~  232 (248)
                       .+...|+.+|.+.+.+++.++++++  +++..+.|+.+-.|
T Consensus       145 ~~p~~~Y~~sK~~~E~~~~~~~~~~~--~~~~~lR~~~vyGp  184 (322)
T d1r6da_         145 LEPNSPYAASKAGSDLVARAYHRTYG--LDVRITRCCNNYGP  184 (322)
T ss_dssp             CCCCSHHHHHHHHHHHHHHHHHHHHC--CCEEEEEECEEECT
T ss_pred             CCCCCHHHHHHHHHHHHHHHHHHHhC--CCEEEEEeeeEECc
Confidence             1345799999999999999999874  67777777777654

>d2bkaa1 c.2.1.2 (A:5-236) TAT-interacting protein TIP30 {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: TAT-interacting protein TIP30
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.47  E-value=8.5e-14  Score=112.50  Aligned_cols=160  Identities=21%  Similarity=0.195  Sum_probs=113.8

Q ss_pred             CCCCCEEEEcCCCChHHHHHHHHHHHcCC--eEEEEeCCcchHHHHHHHHHhhCCCcEEEEEccCCCHHHHHHHHHHHHh
Q 044010           44 DVSGKVVIITGASSGIGEHLAYEYARRGA--CLALCARREKSLEEVADTAREIGSPDVITIRADVSKVDDCRSLVEETMN  121 (248)
Q Consensus        44 ~~~~k~~lVtGg~~gIG~aia~~l~~~G~--~V~l~~r~~~~~~~~~~~l~~~~~~~v~~~~~D~~~~~~~~~~~~~~~~  121 (248)
                      +|++|++|||||||.||.+++++|+++|.  +|.+++|++.....       .....+....+|+.+.+++.++      
T Consensus        11 ~m~~k~IlItGaTG~iG~~l~~~Ll~~g~~~~v~~~~R~~~~~~~-------~~~~~i~~~~~D~~~~~~~~~~------   77 (232)
T d2bkaa1          11 RMQNKSVFILGASGETGRVLLKEILEQGLFSKVTLIGRRKLTFDE-------EAYKNVNQEVVDFEKLDDYASA------   77 (232)
T ss_dssp             HHTCCEEEEECTTSHHHHHHHHHHHHHTCCSEEEEEESSCCCCCS-------GGGGGCEEEECCGGGGGGGGGG------
T ss_pred             CCCCCEEEEECCCcHHHHHHHHHHHhCCCCCEEEEEecChhhhcc-------cccceeeeeeeccccccccccc------
Confidence            47889999999999999999999999995  89999997653221       1112566777888877655433      


Q ss_pred             HcCCccEEEEccccCCcccccccCChHHHHHHHHhhhHHHHHHHHHHhhhhhhcCCeEEEEcCccccccCCCCccchHHH
Q 044010          122 HFGRLDHLVNNAGISSVALFEDIVNITDFKQIMNINFWGSVYTTRFAVPHLRYTKGKIVVLSSAASWLTAPRMSFYNASK  201 (248)
Q Consensus       122 ~~g~id~vv~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~g~iV~isS~~~~~~~~~~~~Y~~sK  201 (248)
                       +.++|+++|++|....        ..+......+|+.++..+++.+...   .-.++|++||......  ....|+.+|
T Consensus        78 -~~~~d~vi~~~~~~~~--------~~~~~~~~~~~~~~~~~~~~~a~~~---~v~~fi~~Ss~~~~~~--~~~~Y~~~K  143 (232)
T d2bkaa1          78 -FQGHDVGFCCLGTTRG--------KAGAEGFVRVDRDYVLKSAELAKAG---GCKHFNLLSSKGADKS--SNFLYLQVK  143 (232)
T ss_dssp             -GSSCSEEEECCCCCHH--------HHHHHHHHHHHTHHHHHHHHHHHHT---TCCEEEEECCTTCCTT--CSSHHHHHH
T ss_pred             -cccccccccccccccc--------ccchhhhhhhcccccceeeeccccc---CccccccCCccccccC--ccchhHHHH
Confidence             3479999999986421        2344566778999998888887532   2358999998776543  345799999


Q ss_pred             HHHHHHHHHHHHHhCCCeEEEEEecCccccCccc
Q 044010          202 AALVLFFETLRVELGSDVGVTIVTPGFIESELTQ  235 (248)
Q Consensus       202 aal~~l~~~la~~~~~~i~v~~v~pg~v~T~~~~  235 (248)
                      ...+...+.    .+.. ++..+.||.+..+...
T Consensus       144 ~~~E~~l~~----~~~~-~~~IlRP~~i~G~~~~  172 (232)
T d2bkaa1         144 GEVEAKVEE----LKFD-RYSVFRPGVLLCDRQE  172 (232)
T ss_dssp             HHHHHHHHT----TCCS-EEEEEECCEEECTTGG
T ss_pred             HHhhhcccc----cccc-ceEEecCceeecCCCc
Confidence            888865432    2222 4566789998776433

>d2q46a1 c.2.1.2 (A:2-253) Hypothetical protein At5g02240 (T7H20_290) {Thale cress (Arabidopsis thaliana) [TaxId: 3702]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Hypothetical protein At5g02240 (T7H20 290)
species: Thale cress (Arabidopsis thaliana) [TaxId: 3702]

Probab=99.37  E-value=3e-12  Score=102.14  Aligned_cols=166  Identities=16%  Similarity=0.082  Sum_probs=107.1

Q ss_pred             CEEEEcCCCChHHHHHHHHHHHcCCe--EEEEeCCcchHHHHHHHHHhhCCCcEEEEEccCCCHHHHHHHHHHHHhHcCC
Q 044010           48 KVVIITGASSGIGEHLAYEYARRGAC--LALCARREKSLEEVADTAREIGSPDVITIRADVSKVDDCRSLVEETMNHFGR  125 (248)
Q Consensus        48 k~~lVtGg~~gIG~aia~~l~~~G~~--V~l~~r~~~~~~~~~~~l~~~~~~~v~~~~~D~~~~~~~~~~~~~~~~~~g~  125 (248)
                      +++|||||+|+||.+++++|+++|++  |+...|++++.+.       .. .++.++.+|+++.+++.++++       +
T Consensus         4 ~tVlVtGatG~iG~~l~~~Ll~~g~~v~v~~~~R~~~~~~~-------~~-~~~~~~~~d~~~~~~~~~~~~-------~   68 (252)
T d2q46a1           4 PTVLVTGASGRTGQIVYKKLKEGSDKFVAKGLVRSAQGKEK-------IG-GEADVFIGDITDADSINPAFQ-------G   68 (252)
T ss_dssp             CEEEEESTTSTTHHHHHHHHHHTTTTCEEEEEESCHHHHHH-------TT-CCTTEEECCTTSHHHHHHHHT-------T
T ss_pred             CEEEEECCccHHHHHHHHHHHHCCCcEEEEEEcCCHHHHHh-------cc-CCcEEEEeeeccccccccccc-------c
Confidence            68999999999999999999999975  5556777643221       12 367789999999998887764       6


Q ss_pred             ccEEEEccccCCcccccc--------cCChHHHHHHHHhhhHHHHHHHHHHhhhhhhcCCeEEEEcCccccccCCCCccc
Q 044010          126 LDHLVNNAGISSVALFED--------IVNITDFKQIMNINFWGSVYTTRFAVPHLRYTKGKIVVLSSAASWLTAPRMSFY  197 (248)
Q Consensus       126 id~vv~~ag~~~~~~~~~--------~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~g~iV~isS~~~~~~~~~~~~Y  197 (248)
                      +|.+||+++.........        ......+.....+|+.+...+.......   ..+.....|+.....+......+
T Consensus        69 ~d~vi~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~s~~~~~~~~~~~~~~  145 (252)
T d2q46a1          69 IDALVILTSAVPKMKPGFDPTKGGRPEFIFEDGQYPEQVDWIGQKNQIDAAKVA---GVKHIVVVGSMGGTNPDHPLNKL  145 (252)
T ss_dssp             CSEEEECCCCCCEECTTCCTTSCCCCCEECCTTCSHHHHTTHHHHHHHHHHHHH---TCSEEEEEEETTTTCTTCGGGGG
T ss_pred             ceeeEEEEeeccccccccchhhhhhcccccccchhhhccccccceeeccccccc---cccccccccccccCCCCcccccc
Confidence            999999998654321111        0011334556677888887777665433   33577777776655444333333


Q ss_pred             hHHH-HHHHHHHHHHHHHhCCCeEEEEEecCccccCc
Q 044010          198 NASK-AALVLFFETLRVELGSDVGVTIVTPGFIESEL  233 (248)
Q Consensus       198 ~~sK-aal~~l~~~la~~~~~~i~v~~v~pg~v~T~~  233 (248)
                      ..++ .....+...+..+.  ++++..+.||.+..+.
T Consensus       146 ~~~~~~~~~~~~~~~~~~~--~~~~~ilRp~~v~g~~  180 (252)
T d2q46a1         146 GNGNILVWKRKAEQYLADS--GTPYTIIRAGGLLDKE  180 (252)
T ss_dssp             GGCCHHHHHHHHHHHHHHS--SSCEEEEEECEEECSC
T ss_pred             cccchhhhhhhhhhhhhcc--cccceeecceEEECCC
Confidence            3322 22223333333333  4778889999886654

>d1n2sa_ c.2.1.2 (A:) dTDP-6-deoxy-L-lyxo-4-hexulose reductase (RmlD) {Salmonella enterica serovar typhimurium [TaxId: 90371]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: dTDP-6-deoxy-L-lyxo-4-hexulose reductase (RmlD)
species: Salmonella enterica serovar typhimurium [TaxId: 90371]

Probab=99.27  E-value=1.1e-11  Score=102.09  Aligned_cols=129  Identities=18%  Similarity=0.128  Sum_probs=94.5

Q ss_pred             EEEEcCCCChHHHHHHHHHHHcCCeEEEEeCCcchHHHHHHHHHhhCCCcEEEEEccCCCHHHHHHHHHHHHhHcCCccE
Q 044010           49 VVIITGASSGIGEHLAYEYARRGACLALCARREKSLEEVADTAREIGSPDVITIRADVSKVDDCRSLVEETMNHFGRLDH  128 (248)
Q Consensus        49 ~~lVtGg~~gIG~aia~~l~~~G~~V~l~~r~~~~~~~~~~~l~~~~~~~v~~~~~D~~~~~~~~~~~~~~~~~~g~id~  128 (248)
                      ++|||||+|.||.+++++|.++|..| .++++...                  +..|++|.+.++++++..     ++|+
T Consensus         2 KILItG~tGfiG~~l~~~L~~~g~~v-~~~~~~~~------------------~~~Dl~~~~~~~~~i~~~-----~~D~   57 (298)
T d1n2sa_           2 NILLFGKTGQVGWELQRSLAPVGNLI-ALDVHSKE------------------FCGDFSNPKGVAETVRKL-----RPDV   57 (298)
T ss_dssp             EEEEECTTSHHHHHHHHHTTTTSEEE-EECTTCSS------------------SCCCTTCHHHHHHHHHHH-----CCSE
T ss_pred             EEEEECCCCHHHHHHHHHHHhCCCEE-EEECCCcc------------------ccCcCCCHHHHHHHHHHc-----CCCE
Confidence            48999999999999999999998544 44554321                  346999999999988765     7999


Q ss_pred             EEEccccCCcccccccCChHHHHHHHHhhhHHHHHHHHHHhhhhhhcCCeEEEEcCccccccCC-----------CCccc
Q 044010          129 LVNNAGISSVALFEDIVNITDFKQIMNINFWGSVYTTRFAVPHLRYTKGKIVVLSSAASWLTAP-----------RMSFY  197 (248)
Q Consensus       129 vv~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~g~iV~isS~~~~~~~~-----------~~~~Y  197 (248)
                      |||+||.......     .++....+.+|+.+...+.+++.    +.+.+++++||...+.+..           +...|
T Consensus        58 Vih~Aa~~~~~~~-----~~~~~~~~~~n~~~~~~l~~~~~----~~~~~~~~~ss~~~~~~~~~~~~~E~~~~~p~~~y  128 (298)
T d1n2sa_          58 IVNAAAHTAVDKA-----ESEPELAQLLNATSVEAIAKAAN----ETGAWVVHYSTDYVFPGTGDIPWQETDATSPLNVY  128 (298)
T ss_dssp             EEECCCCCCHHHH-----TTCHHHHHHHHTHHHHHHHHHHT----TTTCEEEEEEEGGGSCCCTTCCBCTTSCCCCSSHH
T ss_pred             EEEeccccccccc-----ccCccccccccccccccchhhhh----ccccccccccccccccCCCCCCCccccccCCCchH
Confidence            9999997654322     23345677889999988888864    3345788888776554321           23579


Q ss_pred             hHHHHHHHHHHHH
Q 044010          198 NASKAALVLFFET  210 (248)
Q Consensus       198 ~~sKaal~~l~~~  210 (248)
                      +.+|.+.+.+.+.
T Consensus       129 ~~~k~~~e~~~~~  141 (298)
T d1n2sa_         129 GKTKLAGEKALQD  141 (298)
T ss_dssp             HHHHHHHHHHHHH
T ss_pred             hhhhhhhhhhHHh
Confidence            9999888765543

>d1vl0a_ c.2.1.2 (A:) DTDP-4-dehydrorhamnose reductase RfbD {Clostridium acetobutylicum [TaxId: 1488]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: DTDP-4-dehydrorhamnose reductase RfbD
species: Clostridium acetobutylicum [TaxId: 1488]

Probab=99.22  E-value=1.1e-10  Score=95.57  Aligned_cols=142  Identities=18%  Similarity=0.219  Sum_probs=99.5

Q ss_pred             EEEEcCCCChHHHHHHHHHHHcCCeEEEEeCCcchHHHHHHHHHhhCCCcEEEEEccCCCHHHHHHHHHHHHhHcCCccE
Q 044010           49 VVIITGASSGIGEHLAYEYARRGACLALCARREKSLEEVADTAREIGSPDVITIRADVSKVDDCRSLVEETMNHFGRLDH  128 (248)
Q Consensus        49 ~~lVtGg~~gIG~aia~~l~~~G~~V~l~~r~~~~~~~~~~~l~~~~~~~v~~~~~D~~~~~~~~~~~~~~~~~~g~id~  128 (248)
                      ++|||||||.||.+++++|.++|++|+.++|+.                      +|++|.++++++++..     ++|+
T Consensus         3 KIlItGasGfiG~~l~~~L~~~g~~Vi~~~r~~----------------------~D~~d~~~~~~~l~~~-----~~d~   55 (281)
T d1vl0a_           3 KILITGANGQLGREIQKQLKGKNVEVIPTDVQD----------------------LDITNVLAVNKFFNEK-----KPNV   55 (281)
T ss_dssp             EEEEESTTSHHHHHHHHHHTTSSEEEEEECTTT----------------------CCTTCHHHHHHHHHHH-----CCSE
T ss_pred             EEEEECCCCHHHHHHHHHHHhCCCEEEEeechh----------------------ccCCCHHHHHHHHHHc-----CCCE
Confidence            489999999999999999999999999998853                      4899999999888764     7999


Q ss_pred             EEEccccCCcccccccCChHHHHHHHHhhhHHHHHHHHHHhhhhhhcCCeEEEEcCcccccc-----------CCCCccc
Q 044010          129 LVNNAGISSVALFEDIVNITDFKQIMNINFWGSVYTTRFAVPHLRYTKGKIVVLSSAASWLT-----------APRMSFY  197 (248)
Q Consensus       129 vv~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~g~iV~isS~~~~~~-----------~~~~~~Y  197 (248)
                      ++|+|+......     .....+.....|......+......    ....+++.||...+..           ..+...|
T Consensus        56 vih~a~~~~~~~-----~~~~~~~~~~~n~~~~~~~~~~~~~----~~~~~~~~ss~~v~~~~~~~~~~e~~~~~~~~~~  126 (281)
T d1vl0a_          56 VINCAAHTAVDK-----CEEQYDLAYKINAIGPKNLAAAAYS----VGAEIVQISTDYVFDGEAKEPITEFDEVNPQSAY  126 (281)
T ss_dssp             EEECCCCCCHHH-----HHHCHHHHHHHHTHHHHHHHHHHHH----HTCEEEEEEEGGGSCSCCSSCBCTTSCCCCCSHH
T ss_pred             EEeecccccccc-----ccccchhhccccccccccccccccc----ccccccccccceeeeccccccccccccccchhhh
Confidence            999998765332     2233456667777777666655432    3346666666554332           1234568


Q ss_pred             hHHHHHHHHHHHHHHHHhCCCeEEEEEecCccccC
Q 044010          198 NASKAALVLFFETLRVELGSDVGVTIVTPGFIESE  232 (248)
Q Consensus       198 ~~sKaal~~l~~~la~~~~~~i~v~~v~pg~v~T~  232 (248)
                      +.+|...+.+.+    +++  .+...+.|+.+..+
T Consensus       127 ~~~k~~~e~~~~----~~~--~~~~i~R~~~vyG~  155 (281)
T d1vl0a_         127 GKTKLEGENFVK----ALN--PKYYIVRTAWLYGD  155 (281)
T ss_dssp             HHHHHHHHHHHH----HHC--SSEEEEEECSEESS
T ss_pred             hhhhhHHHHHHH----HhC--CCccccceeEEeCC
Confidence            888887776543    333  24445777776543

>d1qyda_ c.2.1.2 (A:) Pinoresinol-lariciresinol reductase {Giant arborvitae (Thuja plicata) [TaxId: 3316]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Pinoresinol-lariciresinol reductase
species: Giant arborvitae (Thuja plicata) [TaxId: 3316]

Probab=99.12  E-value=6e-10  Score=91.98  Aligned_cols=157  Identities=10%  Similarity=-0.028  Sum_probs=93.0

Q ss_pred             CCEEEEcCCCChHHHHHHHHHHHcCCeEEEEeCCcchHH-HHHHHHHhhCCCcEEEEEccCCCHHHHHHHHHHHHhHcCC
Q 044010           47 GKVVIITGASSGIGEHLAYEYARRGACLALCARREKSLE-EVADTAREIGSPDVITIRADVSKVDDCRSLVEETMNHFGR  125 (248)
Q Consensus        47 ~k~~lVtGg~~gIG~aia~~l~~~G~~V~l~~r~~~~~~-~~~~~l~~~~~~~v~~~~~D~~~~~~~~~~~~~~~~~~g~  125 (248)
                      .+++|||||||.||.+++++|+++|++|+++.|+..... ...+.+......++.++.+|++|.+++.+.++       .
T Consensus         3 k~KILVtGatG~iG~~l~~~L~~~G~~V~~~~R~~~~~~~~~~~~~~~~~~~~v~~v~~d~~d~~~~~~~~~-------~   75 (312)
T d1qyda_           3 KSRVLIVGGTGYIGKRIVNASISLGHPTYVLFRPEVVSNIDKVQMLLYFKQLGAKLIEASLDDHQRLVDALK-------Q   75 (312)
T ss_dssp             CCCEEEESTTSTTHHHHHHHHHHTTCCEEEECCSCCSSCHHHHHHHHHHHTTTCEEECCCSSCHHHHHHHHT-------T
T ss_pred             CCEEEEECCCCHHHHHHHHHHHhCCCEEEEEECCCcccchhHHHHHhhhccCCcEEEEeecccchhhhhhcc-------C
Confidence            456999999999999999999999999999999764322 11222332233468899999999988877664       6


Q ss_pred             ccEEEEccccCCcccccccCChHHHHHHHHhhhHHHHHHHHHHhhhhhhcCCeEEEEcCccccccCC-CCccchHHHHHH
Q 044010          126 LDHLVNNAGISSVALFEDIVNITDFKQIMNINFWGSVYTTRFAVPHLRYTKGKIVVLSSAASWLTAP-RMSFYNASKAAL  204 (248)
Q Consensus       126 id~vv~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~g~iV~isS~~~~~~~~-~~~~Y~~sKaal  204 (248)
                      .+.++++++......                |..+...++..+.   .....+++..||........ ....+..++...
T Consensus        76 ~~~~~~~~~~~~~~~----------------~~~~~~~~l~~a~---~~~~~~~v~~Ss~g~~~~~~~~~~~~~~~~~~~  136 (312)
T d1qyda_          76 VDVVISALAGGVLSH----------------HILEQLKLVEAIK---EAGNIKRFLPSEFGMDPDIMEHALQPGSITFID  136 (312)
T ss_dssp             CSEEEECCCCSSSST----------------TTTTHHHHHHHHH---HSCCCSEEECSCCSSCTTSCCCCCSSTTHHHHH
T ss_pred             cchhhhhhhhccccc----------------chhhhhHHHHHHH---HhcCCcEEEEeeccccCCCcccccchhhhhhHH
Confidence            788888887543221                1222222333332   12234666666654332221 112333344443


Q ss_pred             HHHHHHHHHHhCCCeEEEEEecCcccc
Q 044010          205 VLFFETLRVELGSDVGVTIVTPGFIES  231 (248)
Q Consensus       205 ~~l~~~la~~~~~~i~v~~v~pg~v~T  231 (248)
                      .........+.+  +....+.||.+..
T Consensus       137 ~~~~~~~~~~~~--~~~~i~r~~~~~g  161 (312)
T d1qyda_         137 KRKVRRAIEAAS--IPYTYVSSNMFAG  161 (312)
T ss_dssp             HHHHHHHHHHTT--CCBCEEECCEEHH
T ss_pred             HHHHHHhhcccc--cceEEeccceeec
Confidence            444444444433  4555566766643

>d1qyca_ c.2.1.2 (A:) Phenylcoumaran benzylic ether reductase {Loblolly pine (Pinus taeda) [TaxId: 3352]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Phenylcoumaran benzylic ether reductase
species: Loblolly pine (Pinus taeda) [TaxId: 3352]

Probab=99.11  E-value=1.6e-09  Score=88.76  Aligned_cols=155  Identities=14%  Similarity=0.079  Sum_probs=96.6

Q ss_pred             CCCEEEEcCCCChHHHHHHHHHHHcCCeEEEEeCCcchHHH--HHHHHHhhCCCcEEEEEccCCCHHHHHHHHHHHHhHc
Q 044010           46 SGKVVIITGASSGIGEHLAYEYARRGACLALCARREKSLEE--VADTAREIGSPDVITIRADVSKVDDCRSLVEETMNHF  123 (248)
Q Consensus        46 ~~k~~lVtGg~~gIG~aia~~l~~~G~~V~l~~r~~~~~~~--~~~~l~~~~~~~v~~~~~D~~~~~~~~~~~~~~~~~~  123 (248)
                      +.|++|||||||.||.+++++|+++|++|++++|+......  ..+.+.......+.++.+|+++..+..+.++      
T Consensus         2 ~kkKILVtGatG~iG~~l~~~L~~~G~~V~~l~R~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~------   75 (307)
T d1qyca_           2 SRSRILLIGATGYIGRHVAKASLDLGHPTFLLVRESTASSNSEKAQLLESFKASGANIVHGSIDDHASLVEAVK------   75 (307)
T ss_dssp             CCCCEEEESTTSTTHHHHHHHHHHTTCCEEEECCCCCTTTTHHHHHHHHHHHTTTCEEECCCTTCHHHHHHHHH------
T ss_pred             CCCEEEEECCCcHHHHHHHHHHHHCCCeEEEEECCCccccchhHHHHHHhhccCCcEEEEeecccchhhhhhhh------
Confidence            46789999999999999999999999999999997654221  1222333333467889999999988777765      


Q ss_pred             CCccEEEEccccCCcccccccCChHHHHHHHHhhhHHHHHHHHHHhhhhhhcCCeEEEEcCccccccCCCCccchHHHHH
Q 044010          124 GRLDHLVNNAGISSVALFEDIVNITDFKQIMNINFWGSVYTTRFAVPHLRYTKGKIVVLSSAASWLTAPRMSFYNASKAA  203 (248)
Q Consensus       124 g~id~vv~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~g~iV~isS~~~~~~~~~~~~Y~~sKaa  203 (248)
                       ..+.++++++.....                    +...+.+++.   ......+++.||............+...+..
T Consensus        76 -~~~~vi~~~~~~~~~--------------------~~~~~~~a~~---~~~~~~~~~~s~~~~~~~~~~~~~~~~~~~~  131 (307)
T d1qyca_          76 -NVDVVISTVGSLQIE--------------------SQVNIIKAIK---EVGTVKRFFPSEFGNDVDNVHAVEPAKSVFE  131 (307)
T ss_dssp             -TCSEEEECCCGGGSG--------------------GGHHHHHHHH---HHCCCSEEECSCCSSCTTSCCCCTTHHHHHH
T ss_pred             -hceeeeecccccccc--------------------hhhHHHHHHH---Hhccccceeeecccccccccccccccccccc
Confidence             688899888643211                    1111222221   1123456666665544444444445555554


Q ss_pred             HHHHHHHHHHHhCCCeEEEEEecCccccC
Q 044010          204 LVLFFETLRVELGSDVGVTIVTPGFIESE  232 (248)
Q Consensus       204 l~~l~~~la~~~~~~i~v~~v~pg~v~T~  232 (248)
                      ..........+.+  +....+.|+.+..+
T Consensus       132 ~~~~~~~~~~~~~--~~~~i~r~~~v~g~  158 (307)
T d1qyca_         132 VKAKVRRAIEAEG--IPYTYVSSNCFAGY  158 (307)
T ss_dssp             HHHHHHHHHHHHT--CCBEEEECCEEHHH
T ss_pred             ccccccchhhccC--CCceecccceecCC
Confidence            4444444445543  45555677766543

>d2a35a1 c.2.1.2 (A:4-215) Hypothetical protein PA4017 {Pseudomonas aeruginosa [TaxId: 287]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Hypothetical protein PA4017
species: Pseudomonas aeruginosa [TaxId: 287]

Probab=99.10  E-value=1.2e-10  Score=92.07  Aligned_cols=151  Identities=19%  Similarity=0.189  Sum_probs=99.7

Q ss_pred             CCEEEEcCCCChHHHHHHHHHHHcCC--eEEEEeCCcchHHHHHHHHHhhCCCcEEEEEccCCCHHHHHHHHHHHHhHcC
Q 044010           47 GKVVIITGASSGIGEHLAYEYARRGA--CLALCARREKSLEEVADTAREIGSPDVITIRADVSKVDDCRSLVEETMNHFG  124 (248)
Q Consensus        47 ~k~~lVtGg~~gIG~aia~~l~~~G~--~V~l~~r~~~~~~~~~~~l~~~~~~~v~~~~~D~~~~~~~~~~~~~~~~~~g  124 (248)
                      .|++|||||||.||.+++++|+++|+  +|+...|++..           ...+   +..+..|..++.   +   ...+
T Consensus         2 ~KkIlItGatG~iG~~lv~~L~~~~~~~~v~~~~r~~~~-----------~~~~---~~~~~~d~~~~~---~---~~~~   61 (212)
T d2a35a1           2 PKRVLLAGATGLTGEHLLDRILSEPTLAKVIAPARKALA-----------EHPR---LDNPVGPLAELL---P---QLDG   61 (212)
T ss_dssp             CCEEEEECTTSHHHHHHHHHHHHCTTCCEEECCBSSCCC-----------CCTT---EECCBSCHHHHG---G---GCCS
T ss_pred             CCEEEEECCCcHHHHHHHHHHHhCCCeEEEEEEeCCchh-----------hccc---ccccccchhhhh---h---cccc
Confidence            48999999999999999999999997  67777775422           0112   334444443321   1   2235


Q ss_pred             CccEEEEccccCCcccccccCChHHHHHHHHhhhHHHHHHHHHHhhhhhhcCCeEEEEcCccccccCCCCccchHHHHHH
Q 044010          125 RLDHLVNNAGISSVALFEDIVNITDFKQIMNINFWGSVYTTRFAVPHLRYTKGKIVVLSSAASWLTAPRMSFYNASKAAL  204 (248)
Q Consensus       125 ~id~vv~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~g~iV~isS~~~~~~~~~~~~Y~~sKaal  204 (248)
                      .+|.+++++|......       ..-.....+|+.++..+++.+...   .-.+++++||..+...  ....|..+|...
T Consensus        62 ~~d~vi~~~g~~~~~~-------~~~~~~~~~~~~~~~~~~~~a~~~---~v~~~i~~Ss~~~~~~--~~~~y~~~K~~~  129 (212)
T d2a35a1          62 SIDTAFCCLGTTIKEA-------GSEEAFRAVDFDLPLAVGKRALEM---GARHYLVVSALGADAK--SSIFYNRVKGEL  129 (212)
T ss_dssp             CCSEEEECCCCCHHHH-------SSHHHHHHHHTHHHHHHHHHHHHT---TCCEEEEECCTTCCTT--CSSHHHHHHHHH
T ss_pred             chheeeeeeeeecccc-------ccccccccchhhhhhhcccccccc---cccccccccccccccc--cccchhHHHHHH
Confidence            7999999998653221       112456777889988888876422   2258999998765433  356799999887


Q ss_pred             HHHHHHHHHHhCCCeEEEEEecCccccCcc
Q 044010          205 VLFFETLRVELGSDVGVTIVTPGFIESELT  234 (248)
Q Consensus       205 ~~l~~~la~~~~~~i~v~~v~pg~v~T~~~  234 (248)
                      +...+    +.+. -+..-+.|+.+..+..
T Consensus       130 E~~l~----~~~~-~~~~I~Rp~~v~G~~~  154 (212)
T d2a35a1         130 EQALQ----EQGW-PQLTIARPSLLFGPRE  154 (212)
T ss_dssp             HHHHT----TSCC-SEEEEEECCSEESTTS
T ss_pred             hhhcc----cccc-ccceeeCCcceeCCcc
Confidence            76543    2221 2566678998866543

>d1jaya_ c.2.1.6 (A:) Coenzyme F420H2:NADP+ oxidoreductase (FNO) {Archaeon Archaeoglobus fulgidus [TaxId: 2234]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: 6-phosphogluconate dehydrogenase-like, N-terminal domain
domain: Coenzyme F420H2:NADP+ oxidoreductase (FNO)
species: Archaeon Archaeoglobus fulgidus [TaxId: 2234]

Probab=99.01  E-value=1.6e-14  Score=112.71  Aligned_cols=47  Identities=30%  Similarity=0.416  Sum_probs=42.2

Q ss_pred             EEEEcCCCChHHHHHHHHHHHcCCeEEEEeCCcchHHHHHHHHHhhC
Q 044010           49 VVIITGASSGIGEHLAYEYARRGACLALCARREKSLEEVADTAREIG   95 (248)
Q Consensus        49 ~~lVtGg~~gIG~aia~~l~~~G~~V~l~~r~~~~~~~~~~~l~~~~   95 (248)
                      ++.|+||+|++|.++|++|+++|++|++.+|+++++++..+++.+..
T Consensus         2 ki~vigGaG~iG~alA~~la~~G~~V~l~~R~~e~~~~l~~~i~~~~   48 (212)
T d1jaya_           2 RVALLGGTGNLGKGLALRLATLGHEIVVGSRREEKAEAKAAEYRRIA   48 (212)
T ss_dssp             EEEEETTTSHHHHHHHHHHHTTTCEEEEEESSHHHHHHHHHHHHHHH
T ss_pred             EEEEEeCCcHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHhcC
Confidence            35677888999999999999999999999999999999998887654

>d1eq2a_ c.2.1.2 (A:) ADP-L-glycero-D-mannoheptose 6-epimerase {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: ADP-L-glycero-D-mannoheptose 6-epimerase
species: Escherichia coli [TaxId: 562]

Probab=98.99  E-value=2e-09  Score=88.55  Aligned_cols=155  Identities=17%  Similarity=0.203  Sum_probs=94.8

Q ss_pred             EEEcCCCChHHHHHHHHHHHcCC-eEEEEeCCcchHHHHHHHHHhhCCCcEEEEEccCCCHHHHHHHHHHHHh--HcCCc
Q 044010           50 VIITGASSGIGEHLAYEYARRGA-CLALCARREKSLEEVADTAREIGSPDVITIRADVSKVDDCRSLVEETMN--HFGRL  126 (248)
Q Consensus        50 ~lVtGg~~gIG~aia~~l~~~G~-~V~l~~r~~~~~~~~~~~l~~~~~~~v~~~~~D~~~~~~~~~~~~~~~~--~~g~i  126 (248)
                      +|||||+|.||.+++++|+++|+ +|+.+++-... .+... +.+.       ..+|..+.+   ...+....  .+..+
T Consensus         2 ILITGgsGfIGs~lv~~L~~~g~~~V~~~d~~~~~-~~~~~-~~~~-------~~~~~~~~~---~~~~~~~~~~~~~~~   69 (307)
T d1eq2a_           2 IIVTGGAGFIGSNIVKALNDKGITDILVVDNLKDG-TKFVN-LVDL-------NIADYMDKE---DFLIQIMAGEEFGDV   69 (307)
T ss_dssp             EEEETTTSHHHHHHHHHHHTTTCCCEEEEECCSSG-GGGHH-HHTS-------CCSEEEEHH---HHHHHHHTTCCCSSC
T ss_pred             EEEecCccHHHHHHHHHHHhCCCCeEEEEECCCCc-chhhc-cccc-------chhhhccch---HHHHHHhhhhcccch
Confidence            79999999999999999999997 67777643221 11111 1111       112222333   33333332  34578


Q ss_pred             cEEEEccccCCcccccccCChHHHHHHHHhhhHHHHHHHHHHhhhhhhcCCeEEEEcCccccccC-----------CCCc
Q 044010          127 DHLVNNAGISSVALFEDIVNITDFKQIMNINFWGSVYTTRFAVPHLRYTKGKIVVLSSAASWLTA-----------PRMS  195 (248)
Q Consensus       127 d~vv~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~g~iV~isS~~~~~~~-----------~~~~  195 (248)
                      ++++|.|+......       .+.....+.|+.+...+++.+..    .+-++++.||.....+.           ++..
T Consensus        70 ~~i~~~aa~~~~~~-------~~~~~~~~~~~~~~~~~l~~~~~----~~i~~v~~ss~~~~~~~~~~~~~~~~~~~~~~  138 (307)
T d1eq2a_          70 EAIFHEGACSSTTE-------WDGKYMMDNNYQYSKELLHYCLE----REIPFLYASSAATYGGRTSDFIESREYEKPLN  138 (307)
T ss_dssp             CEEEECCSCCCTTC-------CCHHHHHHHTHHHHHHHHHHHHH----HTCCEEEEEEGGGGTTCCSCBCSSGGGCCCSS
T ss_pred             hhhhhhcccccccc-------ccccccccccccccccccccccc----cccccccccccccccccccccccccccccccc
Confidence            99999987544321       22344566778888777776543    23346666665554322           2446


Q ss_pred             cchHHHHHHHHHHHHHHHHhCCCeEEEEEecCcc
Q 044010          196 FYNASKAALVLFFETLRVELGSDVGVTIVTPGFI  229 (248)
Q Consensus       196 ~Y~~sKaal~~l~~~la~~~~~~i~v~~v~pg~v  229 (248)
                      .|+.+|.+.+.+++.++.+++.  .+..+.|..+
T Consensus       139 ~Y~~~K~~~e~~~~~~~~~~~~--~~~~~r~~~v  170 (307)
T d1eq2a_         139 VYGYSKFLFDEYVRQILPEANS--QIVGFRYFNV  170 (307)
T ss_dssp             HHHHHHHHHHHHHHHHGGGCSS--CEEEEEECEE
T ss_pred             ccccccchhhhhcccccccccc--ccccccceeE
Confidence            7999999999999999888754  3444444444

>d1xgka_ c.2.1.2 (A:) Negative transcriptional regulator NmrA {Aspergillus nidulans [TaxId: 162425]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Negative transcriptional regulator NmrA
species: Aspergillus nidulans [TaxId: 162425]

Probab=98.98  E-value=1.5e-08  Score=85.49  Aligned_cols=149  Identities=17%  Similarity=0.082  Sum_probs=91.9

Q ss_pred             CCCEEEEcCCCChHHHHHHHHHHHcCCeEEEEeCCcchHHHHHHHHHhhCCCcEEEEEccCCCHHHH-HHHHHHHHhHcC
Q 044010           46 SGKVVIITGASSGIGEHLAYEYARRGACLALCARREKSLEEVADTAREIGSPDVITIRADVSKVDDC-RSLVEETMNHFG  124 (248)
Q Consensus        46 ~~k~~lVtGg~~gIG~aia~~l~~~G~~V~l~~r~~~~~~~~~~~l~~~~~~~v~~~~~D~~~~~~~-~~~~~~~~~~~g  124 (248)
                      ++|+++||||||.||.+++++|+++|++|+++.|+..+...  +.+...  ..+..+.+|++|..+. +.+       +.
T Consensus         2 ~kktIlVtGatG~iG~~lv~~Ll~~G~~V~~l~R~~~~~~~--~~~~~~--~~v~~~~gD~~d~~~~~~~a-------~~   70 (350)
T d1xgka_           2 QKKTIAVVGATGRQGASLIRVAAAVGHHVRAQVHSLKGLIA--EELQAI--PNVTLFQGPLLNNVPLMDTL-------FE   70 (350)
T ss_dssp             CCCCEEEESTTSHHHHHHHHHHHHTTCCEEEEESCSCSHHH--HHHHTS--TTEEEEESCCTTCHHHHHHH-------HT
T ss_pred             CCCEEEEECCChHHHHHHHHHHHhCCCeEEEEECCcchhhh--hhhccc--CCCEEEEeeCCCcHHHHHHH-------hc
Confidence            57999999999999999999999999999999998775432  223322  2688999999996553 323       24


Q ss_pred             CccEEEEccccCCcccccccCChHHHHHHHHhhhHHHHHHHHHHhhhhhhcCCeEEEEcCccccccC--CCCccchHHHH
Q 044010          125 RLDHLVNNAGISSVALFEDIVNITDFKQIMNINFWGSVYTTRFAVPHLRYTKGKIVVLSSAASWLTA--PRMSFYNASKA  202 (248)
Q Consensus       125 ~id~vv~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~g~iV~isS~~~~~~~--~~~~~Y~~sKa  202 (248)
                      ..|.++.+......       .          ++....+++.++.   .....+++..||.......  .....|..+|.
T Consensus        71 ~~~~~~~~~~~~~~-------~----------~~~~~~~~~~aa~---~agv~~~v~~Ss~~~~~~~~~~~~~~~~~~k~  130 (350)
T d1xgka_          71 GAHLAFINTTSQAG-------D----------EIAIGKDLADAAK---RAGTIQHYIYSSMPDHSLYGPWPAVPMWAPKF  130 (350)
T ss_dssp             TCSEEEECCCSTTS-------C----------HHHHHHHHHHHHH---HHSCCSEEEEEECCCGGGTSSCCCCTTTHHHH
T ss_pred             CCceEEeecccccc-------h----------hhhhhhHHHHHHH---HhCCCceEEEeeccccccCCcccchhhhhhHH
Confidence            67887776543211       1          1112223333332   1122467777775544332  23346777886


Q ss_pred             HHHHHHHHHHHHhCCCeEEEEEecCcccc
Q 044010          203 ALVLFFETLRVELGSDVGVTIVTPGFIES  231 (248)
Q Consensus       203 al~~l~~~la~~~~~~i~v~~v~pg~v~T  231 (248)
                      ..+.+.+..      .+....+.||....
T Consensus       131 ~~~~~~~~~------~~~~~~vr~~~~~~  153 (350)
T d1xgka_         131 TVENYVRQL------GLPSTFVYAGIYNN  153 (350)
T ss_dssp             HHHHHHHTS------SSCEEEEEECEEGG
T ss_pred             HHHHHHHhh------ccCceeeeeceeec
Confidence            665543322      24555666766544

>d1vi2a1 c.2.1.7 (A:107-288) Putative shikimate dehydrogenase YdiB {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Aminoacid dehydrogenase-like, C-terminal domain
domain: Putative shikimate dehydrogenase YdiB
species: Escherichia coli [TaxId: 562]

Probab=98.26  E-value=5.5e-06  Score=63.24  Aligned_cols=84  Identities=19%  Similarity=0.307  Sum_probs=65.8

Q ss_pred             cCCCCCEEEEcCCCChHHHHHHHHHHHcCC-eEEEEeCCcchHHHHHH---HHHhhCCCcEEEEEccCCCHHHHHHHHHH
Q 044010           43 EDVSGKVVIITGASSGIGEHLAYEYARRGA-CLALCARREKSLEEVAD---TAREIGSPDVITIRADVSKVDDCRSLVEE  118 (248)
Q Consensus        43 ~~~~~k~~lVtGg~~gIG~aia~~l~~~G~-~V~l~~r~~~~~~~~~~---~l~~~~~~~v~~~~~D~~~~~~~~~~~~~  118 (248)
                      -++++|+++|.|+ ||.|++++..|++.|. ++.+..|+.++.++..+   .+.....  ......|+.+.+++.+... 
T Consensus        14 ~~l~~k~vlIlGa-GGaarai~~al~~~g~~~i~i~nR~~~~~~~~~~l~~~~~~~~~--~~~~~~~~~~~~~~~~~~~-   89 (182)
T d1vi2a1          14 FDIKGKTMVLLGA-GGASTAIGAQGAIEGLKEIKLFNRRDEFFDKALAFAQRVNENTD--CVVTVTDLADQQAFAEALA-   89 (182)
T ss_dssp             CCCTTCEEEEECC-SHHHHHHHHHHHHTTCSEEEEEECSSTTHHHHHHHHHHHHHHSS--CEEEEEETTCHHHHHHHHH-
T ss_pred             CCcCCCEEEEECC-cHHHHHHHHHHhhcCCceEeeeccchHHHHHHHHHHHHHHhhcC--cceEeeecccccchhhhhc-
Confidence            4789999999988 7999999999999998 89999999877766544   3443333  3455788888887765543 


Q ss_pred             HHhHcCCccEEEEccccC
Q 044010          119 TMNHFGRLDHLVNNAGIS  136 (248)
Q Consensus       119 ~~~~~g~id~vv~~ag~~  136 (248)
                            +.|++||+....
T Consensus        90 ------~~diiIN~Tp~G  101 (182)
T d1vi2a1          90 ------SADILTNGTKVG  101 (182)
T ss_dssp             ------TCSEEEECSSTT
T ss_pred             ------ccceeccccCCc
Confidence                  799999998754

>d1gpja2 c.2.1.7 (A:144-302) Glutamyl tRNA-reductase middle domain {Archaeon Methanopyrus kandleri [TaxId: 2320]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Aminoacid dehydrogenase-like, C-terminal domain
domain: Glutamyl tRNA-reductase middle domain
species: Archaeon Methanopyrus kandleri [TaxId: 2320]

Probab=98.07  E-value=1.8e-05  Score=59.01  Aligned_cols=76  Identities=20%  Similarity=0.333  Sum_probs=58.0

Q ss_pred             cCCCCCEEEEcCCCChHHHHHHHHHHHcCC-eEEEEeCCcchHHHHHHHHHhhCCCcEEEEEccCCCHHHHHHHHHHHHh
Q 044010           43 EDVSGKVVIITGASSGIGEHLAYEYARRGA-CLALCARREKSLEEVADTAREIGSPDVITIRADVSKVDDCRSLVEETMN  121 (248)
Q Consensus        43 ~~~~~k~~lVtGg~~gIG~aia~~l~~~G~-~V~l~~r~~~~~~~~~~~l~~~~~~~v~~~~~D~~~~~~~~~~~~~~~~  121 (248)
                      .++++++++|.|+ |++|..+++.|.++|+ ++.+..|+.++.++..+++.   . +  .     .+.+++.+.+.    
T Consensus        20 ~~l~~~~ilviGa-G~~g~~v~~~L~~~g~~~i~v~nRt~~ka~~l~~~~~---~-~--~-----~~~~~~~~~l~----   83 (159)
T d1gpja2          20 GSLHDKTVLVVGA-GEMGKTVAKSLVDRGVRAVLVANRTYERAVELARDLG---G-E--A-----VRFDELVDHLA----   83 (159)
T ss_dssp             SCCTTCEEEEESC-CHHHHHHHHHHHHHCCSEEEEECSSHHHHHHHHHHHT---C-E--E-----CCGGGHHHHHH----
T ss_pred             CCcccCeEEEECC-CHHHHHHHHHHHhcCCcEEEEEcCcHHHHHHHHHhhh---c-c--c-----ccchhHHHHhc----
Confidence            3899999999998 9999999999999998 79999999888777766552   1 1  1     12334444333    


Q ss_pred             HcCCccEEEEccccCC
Q 044010          122 HFGRLDHLVNNAGISS  137 (248)
Q Consensus       122 ~~g~id~vv~~ag~~~  137 (248)
                         ..|++|++.+...
T Consensus        84 ---~~Divi~atss~~   96 (159)
T d1gpja2          84 ---RSDVVVSATAAPH   96 (159)
T ss_dssp             ---TCSEEEECCSSSS
T ss_pred             ---cCCEEEEecCCCC
Confidence               7999999987543

>d1e5qa1 c.2.1.3 (A:2-124,A:392-450) Saccharopine reductase {Rice blast fungus (Magnaporthe grisea) [TaxId: 148305]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Glyceraldehyde-3-phosphate dehydrogenase-like, N-terminal domain
domain: Saccharopine reductase
species: Rice blast fungus (Magnaporthe grisea) [TaxId: 148305]

Probab=98.06  E-value=6.8e-06  Score=61.72  Aligned_cols=76  Identities=14%  Similarity=0.153  Sum_probs=55.7

Q ss_pred             CCCEEEEcCCCChHHHHHHHHHHHcCCeEEEEeCCcchHHHHHHHHHhhCCCcEEEEEccCCCHHHHHHHHHHHHhHcCC
Q 044010           46 SGKVVIITGASSGIGEHLAYEYARRGACLALCARREKSLEEVADTAREIGSPDVITIRADVSKVDDCRSLVEETMNHFGR  125 (248)
Q Consensus        46 ~~k~~lVtGg~~gIG~aia~~l~~~G~~V~l~~r~~~~~~~~~~~l~~~~~~~v~~~~~D~~~~~~~~~~~~~~~~~~g~  125 (248)
                      ++|.++|.|+ |.+|..+|+.|+++|++|++.+|+.+++++..+++    + .......+..+....+..+.       .
T Consensus         1 ~~K~IliiGa-G~~G~~~a~~L~~~g~~V~v~dr~~~~a~~l~~~~----~-~~~~~~~~~~~~~~~~~~i~-------~   67 (182)
T d1e5qa1           1 ATKSVLMLGS-GFVTRPTLDVLTDSGIKVTVACRTLESAKKLSAGV----Q-HSTPISLDVNDDAALDAEVA-------K   67 (182)
T ss_dssp             CCCEEEEECC-STTHHHHHHHHHTTTCEEEEEESCHHHHHHHHTTC----T-TEEEEECCTTCHHHHHHHHT-------T
T ss_pred             CCCEEEEECC-CHHHHHHHHHHHhCCCEEEEEECChHHHHHHHhcc----c-ccccccccccchhhhHhhhh-------c
Confidence            4789999876 99999999999999999999999998777655432    2 34455566666655555443       5


Q ss_pred             ccEEEEccc
Q 044010          126 LDHLVNNAG  134 (248)
Q Consensus       126 id~vv~~ag  134 (248)
                      .|.++....
T Consensus        68 ~~~~i~~~~   76 (182)
T d1e5qa1          68 HDLVISLIP   76 (182)
T ss_dssp             SSEEEECSC
T ss_pred             cceeEeecc
Confidence            677766543

>d1v3va2 c.2.1.1 (A:113-294) Leukotriene b4 12-hydroxydehydrogenase/prostaglandin 15-keto reductase {Guinea pig (Cavia porcellus) [TaxId: 10141]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Alcohol dehydrogenase-like, C-terminal domain
domain: Leukotriene b4 12-hydroxydehydrogenase/prostaglandin 15-keto reductase
species: Guinea pig (Cavia porcellus) [TaxId: 10141]

Probab=97.95  E-value=6.7e-06  Score=62.61  Aligned_cols=79  Identities=15%  Similarity=0.274  Sum_probs=55.7

Q ss_pred             CCCEEEEcCCCChHHHHHHHHHHHcCCeEEEEeCCcchHHHHHHHHHhhCCCcEEEEEccCCCHHHHHHHHHHHHhHcCC
Q 044010           46 SGKVVIITGASSGIGEHLAYEYARRGACLALCARREKSLEEVADTAREIGSPDVITIRADVSKVDDCRSLVEETMNHFGR  125 (248)
Q Consensus        46 ~~k~~lVtGg~~gIG~aia~~l~~~G~~V~l~~r~~~~~~~~~~~l~~~~~~~v~~~~~D~~~~~~~~~~~~~~~~~~g~  125 (248)
                      +|.++||+|++||+|.+.++.....|++|+.+++++++.+    .+++.+...    .+|.++.+..++..+..  ..+.
T Consensus        29 ~G~~VlV~ga~ggvG~~aiqlak~~Ga~vi~~~~~~~~~~----~~~~~Ga~~----vi~~~~~~~~~~~~~~~--~~~G   98 (182)
T d1v3va2          29 GGETVLVSAAAGAVGSVVGQIAKLKGCKVVGAAGSDEKIA----YLKQIGFDA----AFNYKTVNSLEEALKKA--SPDG   98 (182)
T ss_dssp             SSCEEEESSTTSHHHHHHHHHHHHTTCEEEEEESSHHHHH----HHHHTTCSE----EEETTSCSCHHHHHHHH--CTTC
T ss_pred             CCCEEEEEeCCCchhHHHHHHHHccCCEEEEeCCCHHHHH----HHHhhhhhh----hcccccccHHHHHHHHh--hcCC
Confidence            5899999999999999999988888999999999875433    344444322    23445554444443332  2247


Q ss_pred             ccEEEEccc
Q 044010          126 LDHLVNNAG  134 (248)
Q Consensus       126 id~vv~~ag  134 (248)
                      +|+++++.|
T Consensus        99 vd~v~D~vG  107 (182)
T d1v3va2          99 YDCYFDNVG  107 (182)
T ss_dssp             EEEEEESSC
T ss_pred             CceeEEecC
Confidence            999999987

>d1nyta1 c.2.1.7 (A:102-271) Shikimate 5-dehydrogenase AroE {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Aminoacid dehydrogenase-like, C-terminal domain
domain: Shikimate 5-dehydrogenase AroE
species: Escherichia coli [TaxId: 562]

Probab=97.92  E-value=1.3e-05  Score=60.33  Aligned_cols=77  Identities=14%  Similarity=0.227  Sum_probs=59.2

Q ss_pred             cCCCCCEEEEcCCCChHHHHHHHHHHHcCCeEEEEeCCcchHHHHHHHHHhhCCCcEEEEEccCCCHHHHHHHHHHHHhH
Q 044010           43 EDVSGKVVIITGASSGIGEHLAYEYARRGACLALCARREKSLEEVADTAREIGSPDVITIRADVSKVDDCRSLVEETMNH  122 (248)
Q Consensus        43 ~~~~~k~~lVtGg~~gIG~aia~~l~~~G~~V~l~~r~~~~~~~~~~~l~~~~~~~v~~~~~D~~~~~~~~~~~~~~~~~  122 (248)
                      -+++||.++|.|+ ||-+++++..|.+.|.+|.+..|+.++.++..+.+.+.+  .+..+  +..+.            .
T Consensus        14 ~~~~~k~vlIlGa-GGaarai~~al~~~g~~i~I~nRt~~ka~~l~~~~~~~~--~~~~~--~~~~~------------~   76 (170)
T d1nyta1          14 FIRPGLRILLIGA-GGASRGVLLPLLSLDCAVTITNRTVSRAEELAKLFAHTG--SIQAL--SMDEL------------E   76 (170)
T ss_dssp             CCCTTCEEEEECC-SHHHHHHHHHHHHTTCEEEEECSSHHHHHHHHHHTGGGS--SEEEC--CSGGG------------T
T ss_pred             CCCCCCEEEEECC-cHHHHHHHHHhcccceEEEeccchHHHHHHHHHHHhhcc--ccccc--ccccc------------c
Confidence            4789999999987 899999999999999999999999998888887776554  23322  22111            1


Q ss_pred             cCCccEEEEccccC
Q 044010          123 FGRLDHLVNNAGIS  136 (248)
Q Consensus       123 ~g~id~vv~~ag~~  136 (248)
                      ..+.|++||+....
T Consensus        77 ~~~~dliIN~Tp~G   90 (170)
T d1nyta1          77 GHEFDLIINATSSG   90 (170)
T ss_dssp             TCCCSEEEECCSCG
T ss_pred             ccccceeecccccC
Confidence            23689999998654

>d1yb5a2 c.2.1.1 (A:121-294) Quinone oxidoreductase {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Alcohol dehydrogenase-like, C-terminal domain
domain: Quinone oxidoreductase
species: Human (Homo sapiens) [TaxId: 9606]

Probab=97.91  E-value=2.1e-05  Score=59.25  Aligned_cols=79  Identities=16%  Similarity=0.159  Sum_probs=54.2

Q ss_pred             CCCEEEEcCCCChHHHHHHHHHHHcCCeEEEEeCCcchHHHHHHHHHhhCCCcEEEEEccCCCHHHHHHHHHHHHhHcCC
Q 044010           46 SGKVVIITGASSGIGEHLAYEYARRGACLALCARREKSLEEVADTAREIGSPDVITIRADVSKVDDCRSLVEETMNHFGR  125 (248)
Q Consensus        46 ~~k~~lVtGg~~gIG~aia~~l~~~G~~V~l~~r~~~~~~~~~~~l~~~~~~~v~~~~~D~~~~~~~~~~~~~~~~~~g~  125 (248)
                      +|.++||+||+|++|...++.....|++|+.+++++++.+.    +++.+.+.    ..|.++.+-.+++.+...  ...
T Consensus        28 ~g~~VlV~Ga~G~vG~~aiq~a~~~G~~vi~~~~~~~~~~~----~~~~Ga~~----vi~~~~~~~~~~i~~~t~--~~g   97 (174)
T d1yb5a2          28 AGESVLVHGASGGVGLAACQIARAYGLKILGTAGTEEGQKI----VLQNGAHE----VFNHREVNYIDKIKKYVG--EKG   97 (174)
T ss_dssp             TTCEEEEETCSSHHHHHHHHHHHHTTCEEEEEESSHHHHHH----HHHTTCSE----EEETTSTTHHHHHHHHHC--TTC
T ss_pred             CCCEEEEEeccccccccccccccccCccccccccccccccc----ccccCccc----ccccccccHHHHhhhhhc--cCC
Confidence            68899999999999999998887889999999987654333    33444322    246666543333332221  136


Q ss_pred             ccEEEEccc
Q 044010          126 LDHLVNNAG  134 (248)
Q Consensus       126 id~vv~~ag  134 (248)
                      +|+++.++|
T Consensus        98 ~d~v~d~~g  106 (174)
T d1yb5a2          98 IDIIIEMLA  106 (174)
T ss_dssp             EEEEEESCH
T ss_pred             ceEEeeccc
Confidence            999998875

>d1lssa_ c.2.1.9 (A:) Ktn Mja218 {Archaeon Methanococcus jannaschii [TaxId: 2190]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Potassium channel NAD-binding domain
domain: Ktn Mja218
species: Archaeon Methanococcus jannaschii [TaxId: 2190]

Probab=97.88  E-value=1.6e-05  Score=57.24  Aligned_cols=71  Identities=18%  Similarity=0.268  Sum_probs=55.5

Q ss_pred             EEEEcCCCChHHHHHHHHHHHcCCeEEEEeCCcchHHHHHHHHHhhCCCcEEEEEccCCCHHHHHHHHHHHHhHcCCccE
Q 044010           49 VVIITGASSGIGEHLAYEYARRGACLALCARREKSLEEVADTAREIGSPDVITIRADVSKVDDCRSLVEETMNHFGRLDH  128 (248)
Q Consensus        49 ~~lVtGg~~gIG~aia~~l~~~G~~V~l~~r~~~~~~~~~~~l~~~~~~~v~~~~~D~~~~~~~~~~~~~~~~~~g~id~  128 (248)
                      +++|.|+ |.+|+.+++.|.++|++|++++++++..+...++    .  ...++..|.++.+.++++-      ..+.|.
T Consensus         2 ~IvI~G~-G~~G~~la~~L~~~g~~v~vid~d~~~~~~~~~~----~--~~~vi~Gd~~~~~~l~~~~------i~~a~~   68 (132)
T d1lssa_           2 YIIIAGI-GRVGYTLAKSLSEKGHDIVLIDIDKDICKKASAE----I--DALVINGDCTKIKTLEDAG------IEDADM   68 (132)
T ss_dssp             EEEEECC-SHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHH----C--SSEEEESCTTSHHHHHHTT------TTTCSE
T ss_pred             EEEEECC-CHHHHHHHHHHHHCCCCcceecCChhhhhhhhhh----h--hhhhccCcccchhhhhhcC------hhhhhh
Confidence            5788987 9999999999999999999999998776655432    2  3567889999998776551      236777


Q ss_pred             EEEc
Q 044010          129 LVNN  132 (248)
Q Consensus       129 vv~~  132 (248)
                      ++..
T Consensus        69 vv~~   72 (132)
T d1lssa_          69 YIAV   72 (132)
T ss_dssp             EEEC
T ss_pred             hccc
Confidence            7664

>d1e3ja2 c.2.1.1 (A:143-312) Ketose reductase (sorbitol dehydrogenase) {Silverleaf whitefly (Bemisia argentifolii) [TaxId: 77855]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Alcohol dehydrogenase-like, C-terminal domain
domain: Ketose reductase (sorbitol dehydrogenase)
species: Silverleaf whitefly (Bemisia argentifolii) [TaxId: 77855]

Probab=97.85  E-value=3.6e-05  Score=57.55  Aligned_cols=82  Identities=24%  Similarity=0.346  Sum_probs=56.2

Q ss_pred             CCCEEEEcCCCChHHHHHHHHHHHcCCeEEEEeCCcchHHHHHHHHHhhCCCcEEEEEccCCCHHHHHHHHHHHHhHcC-
Q 044010           46 SGKVVIITGASSGIGEHLAYEYARRGACLALCARREKSLEEVADTAREIGSPDVITIRADVSKVDDCRSLVEETMNHFG-  124 (248)
Q Consensus        46 ~~k~~lVtGg~~gIG~aia~~l~~~G~~V~l~~r~~~~~~~~~~~l~~~~~~~v~~~~~D~~~~~~~~~~~~~~~~~~g-  124 (248)
                      .|.+++|+| +|++|...+..+...|++|+++++++++.+.+.    +.+. .. .+..|-. .++..+..+.+.+..| 
T Consensus        26 ~g~~vlV~G-~G~vG~~~~~~ak~~Ga~vi~v~~~~~r~~~a~----~~ga-~~-~~~~~~~-~~~~~~~~~~~~~~~g~   97 (170)
T d1e3ja2          26 LGTTVLVIG-AGPIGLVSVLAAKAYGAFVVCTARSPRRLEVAK----NCGA-DV-TLVVDPA-KEEESSIIERIRSAIGD   97 (170)
T ss_dssp             TTCEEEEEC-CSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHH----HTTC-SE-EEECCTT-TSCHHHHHHHHHHHSSS
T ss_pred             CCCEEEEEc-ccccchhhHhhHhhhcccccccchHHHHHHHHH----HcCC-cE-EEecccc-ccccchhhhhhhccccc
Confidence            577999997 689999999888788999999999987655433    3332 22 2222322 2344555566655544 


Q ss_pred             CccEEEEcccc
Q 044010          125 RLDHLVNNAGI  135 (248)
Q Consensus       125 ~id~vv~~ag~  135 (248)
                      .+|++|.++|.
T Consensus        98 g~D~vid~~g~  108 (170)
T d1e3ja2          98 LPNVTIDCSGN  108 (170)
T ss_dssp             CCSEEEECSCC
T ss_pred             CCceeeecCCC
Confidence            79999999874

>d1xa0a2 c.2.1.1 (A:119-294) B. subtilis YhfP homologue {Bacillus stearothermophilus [TaxId: 1422]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Alcohol dehydrogenase-like, C-terminal domain
domain: B. subtilis YhfP homologue
species: Bacillus stearothermophilus [TaxId: 1422]

Probab=97.84  E-value=2.2e-05  Score=59.54  Aligned_cols=79  Identities=19%  Similarity=0.256  Sum_probs=51.9

Q ss_pred             CCCCEEEEcCCCChHHHHHHHHHHHcCCeEEEEeCCcchHHHHHHHHHhhCCCcEEEEEccCCCHHHHHHHHHHHHhHcC
Q 044010           45 VSGKVVIITGASSGIGEHLAYEYARRGACLALCARREKSLEEVADTAREIGSPDVITIRADVSKVDDCRSLVEETMNHFG  124 (248)
Q Consensus        45 ~~~k~~lVtGg~~gIG~aia~~l~~~G~~V~l~~r~~~~~~~~~~~l~~~~~~~v~~~~~D~~~~~~~~~~~~~~~~~~g  124 (248)
                      -+|.++||+||+||.|...++.....|++|+.+.+++++.+.+.    +.+.+.+    .|-++.  ..+.....  ..+
T Consensus        30 ~~g~~VLI~gaaGGVG~~aiQlak~~Ga~Viat~~s~~k~~~~~----~lGa~~v----i~~~~~--~~~~~~~~--~~~   97 (176)
T d1xa0a2          30 PERGPVLVTGATGGVGSLAVSMLAKRGYTVEASTGKAAEHDYLR----VLGAKEV----LAREDV--MAERIRPL--DKQ   97 (176)
T ss_dssp             GGGCCEEESSTTSHHHHHHHHHHHHTTCCEEEEESCTTCHHHHH----HTTCSEE----EECC-----------C--CSC
T ss_pred             CCCCEEEEEeccchHHHHHHHHHHHcCCceEEecCchHHHHHHH----hccccee----eecchh--HHHHHHHh--hcc
Confidence            45889999999999999988877788999999999988765443    3343222    232221  12222211  234


Q ss_pred             CccEEEEcccc
Q 044010          125 RLDHLVNNAGI  135 (248)
Q Consensus       125 ~id~vv~~ag~  135 (248)
                      ++|+++.+.|.
T Consensus        98 gvD~vid~vgg  108 (176)
T d1xa0a2          98 RWAAAVDPVGG  108 (176)
T ss_dssp             CEEEEEECSTT
T ss_pred             CcCEEEEcCCc
Confidence            89999999874

>d1gu7a2 c.2.1.1 (A:161-349) 2,4-dienoyl-CoA reductase {Yeast (Candida tropicalis) [TaxId: 5482]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Alcohol dehydrogenase-like, C-terminal domain
domain: 2,4-dienoyl-CoA reductase
species: Yeast (Candida tropicalis) [TaxId: 5482]

Probab=97.81  E-value=9.6e-05  Score=56.32  Aligned_cols=86  Identities=22%  Similarity=0.275  Sum_probs=58.9

Q ss_pred             CC-EEEEcCCCChHHHHHHHHHHHcCCeEEEEeCCcchHHHHHHHHHhhCCCcEEEEEccCCCHHHHHHHHHHHHh-HcC
Q 044010           47 GK-VVIITGASSGIGEHLAYEYARRGACLALCARREKSLEEVADTAREIGSPDVITIRADVSKVDDCRSLVEETMN-HFG  124 (248)
Q Consensus        47 ~k-~~lVtGg~~gIG~aia~~l~~~G~~V~l~~r~~~~~~~~~~~l~~~~~~~v~~~~~D~~~~~~~~~~~~~~~~-~~g  124 (248)
                      |. +++++||+|++|.+.++-.-..|++|+.+.|+.++.++..+.+++.+.+.+  +..|-.+..+..+.+.++.+ ..+
T Consensus        29 g~~vli~~ga~g~vG~~aiqlAk~~Ga~vI~~v~~~~~~~~~~~~~~~lGad~v--i~~~~~~~~~~~~~v~~~~~~~g~  106 (189)
T d1gu7a2          29 GKDWFIQNGGTSAVGKYASQIGKLLNFNSISVIRDRPNLDEVVASLKELGATQV--ITEDQNNSREFGPTIKEWIKQSGG  106 (189)
T ss_dssp             TTCEEEESCTTSHHHHHHHHHHHHHTCEEEEEECCCTTHHHHHHHHHHHTCSEE--EEHHHHHCGGGHHHHHHHHHHHTC
T ss_pred             CCEEEEEeCCCchHHHHHHHHHhhcCCeEEEEEecccccchHHhhhhhccccEE--EeccccchhHHHHHHHHHHhhccC
Confidence            44 455579999999998887767899999999988888888888888775433  22222222233344444433 345


Q ss_pred             CccEEEEccc
Q 044010          125 RLDHLVNNAG  134 (248)
Q Consensus       125 ~id~vv~~ag  134 (248)
                      ++|+++.+.|
T Consensus       107 ~vdvv~D~vg  116 (189)
T d1gu7a2         107 EAKLALNCVG  116 (189)
T ss_dssp             CEEEEEESSC
T ss_pred             CceEEEECCC
Confidence            7999999875

>d1p77a1 c.2.1.7 (A:102-272) Shikimate 5-dehydrogenase AroE {Haemophilus influenzae [TaxId: 727]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Aminoacid dehydrogenase-like, C-terminal domain
domain: Shikimate 5-dehydrogenase AroE
species: Haemophilus influenzae [TaxId: 727]

Probab=97.78  E-value=4.9e-05  Score=57.22  Aligned_cols=78  Identities=17%  Similarity=0.215  Sum_probs=60.2

Q ss_pred             cCCCCCEEEEcCCCChHHHHHHHHHHHcCCeEEEEeCCcchHHHHHHHHHhhCCCcEEEEEccCCCHHHHHHHHHHHHhH
Q 044010           43 EDVSGKVVIITGASSGIGEHLAYEYARRGACLALCARREKSLEEVADTAREIGSPDVITIRADVSKVDDCRSLVEETMNH  122 (248)
Q Consensus        43 ~~~~~k~~lVtGg~~gIG~aia~~l~~~G~~V~l~~r~~~~~~~~~~~l~~~~~~~v~~~~~D~~~~~~~~~~~~~~~~~  122 (248)
                      -++++|+++|.|+ ||-+++++..|.+.+.+|.++.|+.++.+...+.+....  .+.....|-.              .
T Consensus        14 ~~~~~k~vlIlGa-GGaarai~~aL~~~~~~i~I~nR~~~~a~~l~~~~~~~~--~~~~~~~~~~--------------~   76 (171)
T d1p77a1          14 WLRPNQHVLILGA-GGATKGVLLPLLQAQQNIVLANRTFSKTKELAERFQPYG--NIQAVSMDSI--------------P   76 (171)
T ss_dssp             CCCTTCEEEEECC-SHHHHTTHHHHHHTTCEEEEEESSHHHHHHHHHHHGGGS--CEEEEEGGGC--------------C
T ss_pred             CCCCCCEEEEECC-cHHHHHHHHHHcccCceeeeccchHHHHHHHHHHHhhcc--ccchhhhccc--------------c
Confidence            4789999999976 888999999999878899999999999998888887554  3444444321              1


Q ss_pred             cCCccEEEEccccCC
Q 044010          123 FGRLDHLVNNAGISS  137 (248)
Q Consensus       123 ~g~id~vv~~ag~~~  137 (248)
                      ..+.|++||+....-
T Consensus        77 ~~~~diiIN~tp~g~   91 (171)
T d1p77a1          77 LQTYDLVINATSAGL   91 (171)
T ss_dssp             CSCCSEEEECCCC--
T ss_pred             ccccceeeecccccc
Confidence            347999999987653

>d1pqwa_ c.2.1.1 (A:) Putative enoyl reductase domain of polyketide synthase {Mycobacterium tuberculosis [TaxId: 1773]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Alcohol dehydrogenase-like, C-terminal domain
domain: Putative enoyl reductase domain of polyketide synthase
species: Mycobacterium tuberculosis [TaxId: 1773]

Probab=97.77  E-value=1.9e-05  Score=59.86  Aligned_cols=77  Identities=21%  Similarity=0.245  Sum_probs=53.7

Q ss_pred             CCCEEEEcCCCChHHHHHHHHHHHcCCeEEEEeCCcchHHHHHHHHHhhCCCcEEEEEccCCCHHHHHHHHHHHHhHc--
Q 044010           46 SGKVVIITGASSGIGEHLAYEYARRGACLALCARREKSLEEVADTAREIGSPDVITIRADVSKVDDCRSLVEETMNHF--  123 (248)
Q Consensus        46 ~~k~~lVtGg~~gIG~aia~~l~~~G~~V~l~~r~~~~~~~~~~~l~~~~~~~v~~~~~D~~~~~~~~~~~~~~~~~~--  123 (248)
                      +|.++||+||+|++|...++.+...|++|+++.+++++.    +.+++.+...    ..|-++++ +.   +++.+..  
T Consensus        25 ~g~~VlI~ga~g~vG~~~iqla~~~g~~vi~~~~~~~~~----~~l~~~Ga~~----vi~~~~~~-~~---~~v~~~t~~   92 (183)
T d1pqwa_          25 PGERVLIHSATGGVGMAAVSIAKMIGARIYTTAGSDAKR----EMLSRLGVEY----VGDSRSVD-FA---DEILELTDG   92 (183)
T ss_dssp             TTCEEEETTTTSHHHHHHHHHHHHHTCEEEEEESSHHHH----HHHHTTCCSE----EEETTCST-HH---HHHHHHTTT
T ss_pred             CCCEEEEECCCCCcccccchhhccccccceeeecccccc----cccccccccc----cccCCccC-HH---HHHHHHhCC
Confidence            478999999999999999988878899999999876543    3345544322    23555543 22   2333332  


Q ss_pred             CCccEEEEccc
Q 044010          124 GRLDHLVNNAG  134 (248)
Q Consensus       124 g~id~vv~~ag  134 (248)
                      .++|+++.++|
T Consensus        93 ~g~d~v~d~~g  103 (183)
T d1pqwa_          93 YGVDVVLNSLA  103 (183)
T ss_dssp             CCEEEEEECCC
T ss_pred             CCEEEEEeccc
Confidence            36999999887

>d1qora2 c.2.1.1 (A:113-291) Quinone oxidoreductase {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Alcohol dehydrogenase-like, C-terminal domain
domain: Quinone oxidoreductase
species: Escherichia coli [TaxId: 562]

Probab=97.72  E-value=3.2e-05  Score=58.29  Aligned_cols=80  Identities=14%  Similarity=0.093  Sum_probs=56.0

Q ss_pred             CCCEEEEcCCCChHHHHHHHHHHHcCCeEEEEeCCcchHHHHHHHHHhhCCCcEEEEEccCCCHHHHHHHHHHHHhHcCC
Q 044010           46 SGKVVIITGASSGIGEHLAYEYARRGACLALCARREKSLEEVADTAREIGSPDVITIRADVSKVDDCRSLVEETMNHFGR  125 (248)
Q Consensus        46 ~~k~~lVtGg~~gIG~aia~~l~~~G~~V~l~~r~~~~~~~~~~~l~~~~~~~v~~~~~D~~~~~~~~~~~~~~~~~~g~  125 (248)
                      +|++++|+||+|++|...++.....|++|+.+++++++.+.+    ++.+.+    ..+|.++.+-.+++ .++ .....
T Consensus        28 ~g~~Vlv~ga~g~vG~~~iqlak~~Ga~Vi~~~~s~~k~~~~----~~lGa~----~vi~~~~~d~~~~v-~~~-t~g~g   97 (179)
T d1qora2          28 PDEQFLFHAAAGGVGLIACQWAKALGAKLIGTVGTAQKAQSA----LKAGAW----QVINYREEDLVERL-KEI-TGGKK   97 (179)
T ss_dssp             TTCEEEESSTTBHHHHHHHHHHHHHTCEEEEEESSHHHHHHH----HHHTCS----EEEETTTSCHHHHH-HHH-TTTCC
T ss_pred             CCCEEEEEccccccchHHHHHHHHhCCeEeecccchHHHHHH----HhcCCe----EEEECCCCCHHHHH-HHH-hCCCC
Confidence            488999999999999999988888899999999998765543    334432    23466665433332 222 12236


Q ss_pred             ccEEEEcccc
Q 044010          126 LDHLVNNAGI  135 (248)
Q Consensus       126 id~vv~~ag~  135 (248)
                      +|+++.++|.
T Consensus        98 ~d~v~d~~g~  107 (179)
T d1qora2          98 VRVVYDSVGR  107 (179)
T ss_dssp             EEEEEECSCG
T ss_pred             eEEEEeCccH
Confidence            8999998863

>d1u7za_ c.72.3.1 (A:) Coenzyme A biosynthesis bifunctional protein CoaBC, phosphopantothenoylcysteine synthase domain (CoaB) {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: Ribokinase-like
superfamily: CoaB-like
family: CoaB-like
domain: Coenzyme A biosynthesis bifunctional protein CoaBC, phosphopantothenoylcysteine synthase domain (CoaB)
species: Escherichia coli [TaxId: 562]

Probab=97.63  E-value=0.00015  Score=56.86  Aligned_cols=81  Identities=22%  Similarity=0.254  Sum_probs=57.8

Q ss_pred             cCCCCCEEEEcCC----------------CChHHHHHHHHHHHcCCeEEEEeCCcchHHHHHHHHHhhCCCcEEEEEccC
Q 044010           43 EDVSGKVVIITGA----------------SSGIGEHLAYEYARRGACLALCARREKSLEEVADTAREIGSPDVITIRADV  106 (248)
Q Consensus        43 ~~~~~k~~lVtGg----------------~~gIG~aia~~l~~~G~~V~l~~r~~~~~~~~~~~l~~~~~~~v~~~~~D~  106 (248)
                      .|++|+++|||+|                ||-.|.++|+.+..+|++|.++......          ..+..+..+  .+
T Consensus         2 ~dl~g~~vlITaG~T~E~ID~VR~ItN~SSGk~G~aiA~~~~~~Ga~V~li~g~~~~----------~~p~~~~~~--~~   69 (223)
T d1u7za_           2 NDLKHLNIMITAGPTREPLDPVRYISDHSSGKMGFAIAAAAARRGANVTLVSGPVSL----------PTPPFVKRV--DV   69 (223)
T ss_dssp             CTTTTCEEEEEESBCEEESSSSEEEEECCCSHHHHHHHHHHHHTTCEEEEEECSCCC----------CCCTTEEEE--EC
T ss_pred             cccCCCEEEEECCCCcccCCCcceeccCCcHHHHHHHHHHHHHcCCchhhhhccccc----------Ccccccccc--ee
Confidence            4899999999998                4679999999999999999888775421          111234433  34


Q ss_pred             CCHHHHHHHHHHHHhHcCCccEEEEccccCCc
Q 044010          107 SKVDDCRSLVEETMNHFGRLDHLVNNAGISSV  138 (248)
Q Consensus       107 ~~~~~~~~~~~~~~~~~g~id~vv~~ag~~~~  138 (248)
                      ...++..+.+   .+.+...|++|++|++...
T Consensus        70 ~t~~~m~~~~---~~~~~~~D~~i~aAAvsDf   98 (223)
T d1u7za_          70 MTALEMEAAV---NASVQQQNIFIGCAAVADY   98 (223)
T ss_dssp             CSHHHHHHHH---HHHGGGCSEEEECCBCCSE
T ss_pred             hhhHHHHHHH---HhhhccceeEeeeechhhh
Confidence            4444444444   4455678999999998764

>d1ez4a1 c.2.1.5 (A:16-162) Lactate dehydrogenase {Lactobacillus pentosus [TaxId: 1589]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: LDH N-terminal domain-like
domain: Lactate dehydrogenase
species: Lactobacillus pentosus [TaxId: 1589]

Probab=97.60  E-value=0.00061  Score=49.61  Aligned_cols=111  Identities=14%  Similarity=0.132  Sum_probs=65.0

Q ss_pred             CCEEEEcCCCChHHHHHHHHHHHcC--CeEEEEeCCcchHHHHHHHHHhh--CCCcEEEEEccCCCHHHHHHHHHHHHhH
Q 044010           47 GKVVIITGASSGIGEHLAYEYARRG--ACLALCARREKSLEEVADTAREI--GSPDVITIRADVSKVDDCRSLVEETMNH  122 (248)
Q Consensus        47 ~k~~lVtGg~~gIG~aia~~l~~~G--~~V~l~~r~~~~~~~~~~~l~~~--~~~~v~~~~~D~~~~~~~~~~~~~~~~~  122 (248)
                      ++++.|.|+ |.+|..+|..|+.+|  .+|++.++++++.+.....+...  ..........|.              ++
T Consensus         5 ~~KI~IIGa-G~VG~~~A~~l~~~~~~~elvL~D~~~~~~~g~a~Dl~~a~~~~~~~~~~~~d~--------------~~   69 (146)
T d1ez4a1           5 HQKVVLVGD-GAVGSSYAFAMAQQGIAEEFVIVDVVKDRTKGDALDLEDAQAFTAPKKIYSGEY--------------SD   69 (146)
T ss_dssp             BCEEEEECC-SHHHHHHHHHHHHHTCCSEEEEECSSHHHHHHHHHHHHGGGGGSCCCEEEECCG--------------GG
T ss_pred             CCEEEEECC-CHHHHHHHHHHHhcCCCcEEEEeecccchhHHHHHHHhccccccCCceEeeccH--------------HH
Confidence            557888885 999999999999988  48999999987766555555431  122334444443              12


Q ss_pred             cCCccEEEEccccCCcccccccCChHHHHHHHHhhhHHHHHHHHHHhhhhhhc--CCeEEEEc
Q 044010          123 FGRLDHLVNNAGISSVALFEDIVNITDFKQIMNINFWGSVYTTRFAVPHLRYT--KGKIVVLS  183 (248)
Q Consensus       123 ~g~id~vv~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~--~g~iV~is  183 (248)
                      ..+-|++|.++|......       ++-.+.+..|..-.    +...+.+.+.  ++.++++|
T Consensus        70 ~~~adivvitag~~~~~g-------~~r~~l~~~N~~i~----~~~~~~i~~~~p~aivivvt  121 (146)
T d1ez4a1          70 CKDADLVVITAGAPQKPG-------ESRLDLVNKNLNIL----SSIVKPVVDSGFDGIFLVAA  121 (146)
T ss_dssp             GTTCSEEEECCCC-----------------CHHHHHHHH----HHHHHHHHHTTCCSEEEECS
T ss_pred             hccccEEEEecccccCCC-------CCHHHHHHHHHHHH----HHHHHHHhhcCCCcEEEEeC
Confidence            347899999998654221       22234444554443    4444444332  35555555

>d1o8ca2 c.2.1.1 (A:116-192) Hypothetical protein YhdH {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Alcohol dehydrogenase-like, C-terminal domain
domain: Hypothetical protein YhdH
species: Escherichia coli [TaxId: 562]

Probab=97.57  E-value=8.6e-05  Score=48.13  Aligned_cols=43  Identities=23%  Similarity=0.329  Sum_probs=37.0

Q ss_pred             CCCCEEEEcCCCChHHHHHHHHHHHcCCeEEEEeCCcchHHHH
Q 044010           45 VSGKVVIITGASSGIGEHLAYEYARRGACLALCARREKSLEEV   87 (248)
Q Consensus        45 ~~~k~~lVtGg~~gIG~aia~~l~~~G~~V~l~~r~~~~~~~~   87 (248)
                      -++.+++|+||+||+|....+.+...|++|+.+.+++++.+-+
T Consensus        30 ~~~~~vlI~gasGgVG~~aiQlak~~G~~Vi~~t~s~~k~~~~   72 (77)
T d1o8ca2          30 PQDGEIVVTGASGGVGSTAVALLHKLGYQVVAVSGRESTHEYL   72 (77)
T ss_dssp             GGGCEEEESSTTSHHHHHHHHHHHHTTCCEEEEESCGGGHHHH
T ss_pred             cCCCcEEEEeCCCcHHHHHHHHHHHcCCeEEEEECCHHHHHHH
Confidence            3688999999999999999887777899999999988776544

>d1iz0a2 c.2.1.1 (A:99-269) Quinone oxidoreductase {Thermus thermophilus [TaxId: 274]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Alcohol dehydrogenase-like, C-terminal domain
domain: Quinone oxidoreductase
species: Thermus thermophilus [TaxId: 274]

Probab=97.54  E-value=0.0002  Score=53.57  Aligned_cols=75  Identities=21%  Similarity=0.317  Sum_probs=52.0

Q ss_pred             CCCCEEEEcCCCChHHHHHHHHHHHcCCeEEEEeCCcchHHHHHHHHHhhCCCcEEEEEccCCCHHHHHHHHHHHHhHcC
Q 044010           45 VSGKVVIITGASSGIGEHLAYEYARRGACLALCARREKSLEEVADTAREIGSPDVITIRADVSKVDDCRSLVEETMNHFG  124 (248)
Q Consensus        45 ~~~k~~lVtGg~~gIG~aia~~l~~~G~~V~l~~r~~~~~~~~~~~l~~~~~~~v~~~~~D~~~~~~~~~~~~~~~~~~g  124 (248)
                      -+|++++|+||+|++|...++.+...|++|+.+++++++.+..    ++.+.+.+    .|..+.  .    ++. ....
T Consensus        26 ~~g~~VlI~ga~G~vG~~aiqlak~~G~~vi~~~~~~~~~~~~----~~lGa~~~----i~~~~~--~----~~~-~~~~   90 (171)
T d1iz0a2          26 RPGEKVLVQAAAGALGTAAVQVARAMGLRVLAAASRPEKLALP----LALGAEEA----ATYAEV--P----ERA-KAWG   90 (171)
T ss_dssp             CTTCEEEESSTTBHHHHHHHHHHHHTTCEEEEEESSGGGSHHH----HHTTCSEE----EEGGGH--H----HHH-HHTT
T ss_pred             CCCCEEEEEeccccchhhhhhhhcccccccccccccccccccc----ccccccee----eehhhh--h----hhh-hccc
Confidence            3789999999999999999887778899999999987765543    33343222    233322  1    222 2335


Q ss_pred             CccEEEEccc
Q 044010          125 RLDHLVNNAG  134 (248)
Q Consensus       125 ~id~vv~~ag  134 (248)
                      .+|+++.+.|
T Consensus        91 g~D~v~d~~G  100 (171)
T d1iz0a2          91 GLDLVLEVRG  100 (171)
T ss_dssp             SEEEEEECSC
T ss_pred             cccccccccc
Confidence            7999999765

>d1y7ta1 c.2.1.5 (A:0-153) Malate dehydrogenase {Thermus thermophilus [TaxId: 274]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: LDH N-terminal domain-like
domain: Malate dehydrogenase
species: Thermus thermophilus [TaxId: 274]

Probab=97.49  E-value=0.00083  Score=49.25  Aligned_cols=78  Identities=22%  Similarity=0.173  Sum_probs=50.2

Q ss_pred             EEEEcCCCChHHHHHHHHHHHcCC---------eEEEEeCCcchHHHHHHHHHhhCCCcEEEEEccCCCHHHHHHHHHHH
Q 044010           49 VVIITGASSGIGEHLAYEYARRGA---------CLALCARREKSLEEVADTAREIGSPDVITIRADVSKVDDCRSLVEET  119 (248)
Q Consensus        49 ~~lVtGg~~gIG~aia~~l~~~G~---------~V~l~~r~~~~~~~~~~~l~~~~~~~v~~~~~D~~~~~~~~~~~~~~  119 (248)
                      ++.|+||+|.+|.+++..|+..+.         +++..+++.++.+.....+..........+...-.+.          
T Consensus         6 KV~IiGA~G~VG~~~a~~l~~~~l~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~----------   75 (154)
T d1y7ta1           6 RVAVTGAAGQIGYSLLFRIAAGEMLGKDQPVILQLLEIPQAMKALEGVVMELEDCAFPLLAGLEATDDPK----------   75 (154)
T ss_dssp             EEEESSTTSHHHHHHHHHHHTTTTTCTTCCEEEEEECCGGGHHHHHHHHHHHHTTTCTTEEEEEEESCHH----------
T ss_pred             EEEEECCCCHHHHHHHHHHHhccccccccchhHhHhccccchhhHcCchhhhhccccccccccccCCchh----------
Confidence            799999999999999999998652         2233334445555555555544433444444433222          


Q ss_pred             HhHcCCccEEEEccccCC
Q 044010          120 MNHFGRLDHLVNNAGISS  137 (248)
Q Consensus       120 ~~~~g~id~vv~~ag~~~  137 (248)
                       +.+...|++|.++|...
T Consensus        76 -~~~~~advViitaG~~~   92 (154)
T d1y7ta1          76 -VAFKDADYALLVGAAPR   92 (154)
T ss_dssp             -HHTTTCSEEEECCCCCC
T ss_pred             -hhcccccEEEeecCcCC
Confidence             22348999999999854

>d7mdha1 c.2.1.5 (A:23-197) Malate dehydrogenase {Sorghum (Sorghum vulgare), chloroplast [TaxId: 4558]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: LDH N-terminal domain-like
domain: Malate dehydrogenase
species: Sorghum (Sorghum vulgare), chloroplast [TaxId: 4558]

Probab=97.46  E-value=0.00042  Score=52.13  Aligned_cols=104  Identities=17%  Similarity=0.128  Sum_probs=58.7

Q ss_pred             CEEEEcCCCChHHHHHHHHHHHc---CC----eEEEEeCCcc--hHHHHHHHHHhhCCCcEEEEEccCCCHHHHHHHHHH
Q 044010           48 KVVIITGASSGIGEHLAYEYARR---GA----CLALCARREK--SLEEVADTAREIGSPDVITIRADVSKVDDCRSLVEE  118 (248)
Q Consensus        48 k~~lVtGg~~gIG~aia~~l~~~---G~----~V~l~~r~~~--~~~~~~~~l~~~~~~~v~~~~~D~~~~~~~~~~~~~  118 (248)
                      .++.||||+|.||++++.+|++.   |.    .+.+.+.+..  .++...-++..........+..- ++.   .     
T Consensus        25 ~kV~I~GA~G~Ig~~l~~~La~g~v~g~~~~i~L~L~di~~~~~~l~g~~mdl~d~a~~~~~~~~~~-~~~---~-----   95 (175)
T d7mdha1          25 VNIAVSGAAGMISNHLLFKLASGEVFGQDQPIALKLLGSERSFQALEGVAMELEDSLYPLLREVSIG-IDP---Y-----   95 (175)
T ss_dssp             EEEEEETTTSHHHHHHHHHHHHTTTTCTTCCEEEEEECCGGGHHHHHHHHHHHHTTTCTTEEEEEEE-SCH---H-----
T ss_pred             cEEEEECCCcHHHHHHHHHHHcCcccCCCceEEEEEecCccccchhcchhhhhcccccccccCcccc-ccc---h-----
Confidence            36999999999999999999975   32    4555555442  33444445554433233222211 121   1     


Q ss_pred             HHhHcCCccEEEEccccCCcccccccCChHHHHHHHHhhhHHHHHHHHHHh
Q 044010          119 TMNHFGRLDHLVNNAGISSVALFEDIVNITDFKQIMNINFWGSVYTTRFAV  169 (248)
Q Consensus       119 ~~~~~g~id~vv~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~  169 (248)
                        +.+.+.|++|..+|......       +...+.+..|..-.-.+.+.+.
T Consensus        96 --~~~~~aDvVvi~ag~~rkpg-------~tR~Dll~~N~~I~k~~~~~i~  137 (175)
T d7mdha1          96 --EVFEDVDWALLIGAKPRGPG-------MERAALLDINGQIFADQGKALN  137 (175)
T ss_dssp             --HHTTTCSEEEECCCCCCCTT-------CCHHHHHHHHHHHHHHHHHHHH
T ss_pred             --hhccCCceEEEeeccCCCCC-------CcHHHHHHHHHHHHHHHHHHHH
Confidence              23458999999999753221       2233455556544434444433

>d1ldna1 c.2.1.5 (A:15-162) Lactate dehydrogenase {Bacillus stearothermophilus [TaxId: 1422]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: LDH N-terminal domain-like
domain: Lactate dehydrogenase
species: Bacillus stearothermophilus [TaxId: 1422]

Probab=97.41  E-value=0.0018  Score=47.14  Aligned_cols=79  Identities=19%  Similarity=0.183  Sum_probs=56.5

Q ss_pred             CCCCCEEEEcCCCChHHHHHHHHHHHcCC--eEEEEeCCcchHHHHHHHHHhhC---CCcEEEEEccCCCHHHHHHHHHH
Q 044010           44 DVSGKVVIITGASSGIGEHLAYEYARRGA--CLALCARREKSLEEVADTAREIG---SPDVITIRADVSKVDDCRSLVEE  118 (248)
Q Consensus        44 ~~~~k~~lVtGg~~gIG~aia~~l~~~G~--~V~l~~r~~~~~~~~~~~l~~~~---~~~v~~~~~D~~~~~~~~~~~~~  118 (248)
                      +-.++++.|.|+ |.+|.++|..|+.+|.  ++++.++++++++.....+.+..   ...+.+...|.            
T Consensus         3 ~~~~~KI~IiGa-G~vG~~~a~~l~~~~l~~el~L~Di~~~~~~g~a~Dl~~~~~~~~~~~~~~~~d~------------   69 (148)
T d1ldna1           3 NNGGARVVVIGA-GFVGASYVFALMNQGIADEIVLIDANESKAIGDAMDFNHGKVFAPKPVDIWHGDY------------   69 (148)
T ss_dssp             TTTSCEEEEECC-SHHHHHHHHHHHHHTCCSEEEEECSSHHHHHHHHHHHHHHTTSSSSCCEEEECCG------------
T ss_pred             CCCCCeEEEECc-CHHHHHHHHHHHhcCCCceEEEEeeccccccchhccHhhCccccCCCeEEEECCH------------
Confidence            345678888886 9999999999999875  79999999988776666665432   22333433332            


Q ss_pred             HHhHcCCccEEEEccccCC
Q 044010          119 TMNHFGRLDHLVNNAGISS  137 (248)
Q Consensus       119 ~~~~~g~id~vv~~ag~~~  137 (248)
                        ++..+-|++|.++|...
T Consensus        70 --~~l~daDvvvitag~~~   86 (148)
T d1ldna1          70 --DDCRDADLVVICAGANQ   86 (148)
T ss_dssp             --GGTTTCSEEEECCSCCC
T ss_pred             --HHhccceeEEEeccccc
Confidence              12347899999999754

>d1vj0a2 c.2.1.1 (A:156-337) Hypothetical protein TM0436 {Thermotoga maritima [TaxId: 2336]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Alcohol dehydrogenase-like, C-terminal domain
domain: Hypothetical protein TM0436
species: Thermotoga maritima [TaxId: 2336]

Probab=97.34  E-value=0.00044  Score=52.04  Aligned_cols=80  Identities=23%  Similarity=0.284  Sum_probs=53.7

Q ss_pred             CCCEEEEcCCCChHHHHHHHHHHHcCC-eEEEEeCCcchHHHHHHHHHhhCCCcEEEEEccCCCHHHHHHHHHHHHhHc-
Q 044010           46 SGKVVIITGASSGIGEHLAYEYARRGA-CLALCARREKSLEEVADTAREIGSPDVITIRADVSKVDDCRSLVEETMNHF-  123 (248)
Q Consensus        46 ~~k~~lVtGg~~gIG~aia~~l~~~G~-~V~l~~r~~~~~~~~~~~l~~~~~~~v~~~~~D~~~~~~~~~~~~~~~~~~-  123 (248)
                      +|.+++|+|+ |++|...++.+...|+ +|+++++++++.+.+    ++.+. .   ...|.++. +..+..+++.+.. 
T Consensus        28 ~G~~VlV~Ga-G~iG~~~~~~ak~~Ga~~Vi~~~~~~~~~~~a----~~lGa-~---~vi~~~~~-~~~~~~~~i~~~~~   97 (182)
T d1vj0a2          28 AGKTVVIQGA-GPLGLFGVVIARSLGAENVIVIAGSPNRLKLA----EEIGA-D---LTLNRRET-SVEERRKAIMDITH   97 (182)
T ss_dssp             BTCEEEEECC-SHHHHHHHHHHHHTTBSEEEEEESCHHHHHHH----HHTTC-S---EEEETTTS-CHHHHHHHHHHHTT
T ss_pred             CCCEEEEECC-Cccchhheeccccccccccccccccccccccc----ccccc-e---EEEecccc-chHHHHHHHHHhhC
Confidence            6899999986 8999999888888898 799999988766533    33332 2   12344432 2333334444432 


Q ss_pred             -CCccEEEEcccc
Q 044010          124 -GRLDHLVNNAGI  135 (248)
Q Consensus       124 -g~id~vv~~ag~  135 (248)
                       ..+|++|.++|.
T Consensus        98 ~~g~Dvvid~vG~  110 (182)
T d1vj0a2          98 GRGADFILEATGD  110 (182)
T ss_dssp             TSCEEEEEECSSC
T ss_pred             CCCceEEeecCCc
Confidence             259999999875

>d2hmva1 c.2.1.9 (A:7-140) Ktn bsu222 {Bacillus subtilis [TaxId: 1423]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Potassium channel NAD-binding domain
domain: Ktn bsu222
species: Bacillus subtilis [TaxId: 1423]

Probab=97.28  E-value=0.00011  Score=52.49  Aligned_cols=73  Identities=15%  Similarity=0.216  Sum_probs=52.9

Q ss_pred             CEEEEcCCCChHHHHHHHHHHHcCCeEEEEeCCcchHHHHHHHHHhhCCCcEEEEEccCCCHHHHHHHHHHHHhHcCCcc
Q 044010           48 KVVIITGASSGIGEHLAYEYARRGACLALCARREKSLEEVADTAREIGSPDVITIRADVSKVDDCRSLVEETMNHFGRLD  127 (248)
Q Consensus        48 k~~lVtGg~~gIG~aia~~l~~~G~~V~l~~r~~~~~~~~~~~l~~~~~~~v~~~~~D~~~~~~~~~~~~~~~~~~g~id  127 (248)
                      |+++|.|. |-+|+.+++.|.++|++|++++.+++..+..    +..+   ...+.+|.++++.++++-      ..+.|
T Consensus         1 k~~iIiG~-G~~G~~la~~L~~~g~~vvvid~d~~~~~~~----~~~~---~~~~~gd~~~~~~l~~a~------i~~a~   66 (134)
T d2hmva1           1 KQFAVIGL-GRFGGSIVKELHRMGHEVLAVDINEEKVNAY----ASYA---THAVIANATEENELLSLG------IRNFE   66 (134)
T ss_dssp             CCEEEECC-SHHHHHHHHHHHHTTCCCEEEESCHHHHHHT----TTTC---SEEEECCTTCTTHHHHHT------GGGCS
T ss_pred             CEEEEECC-CHHHHHHHHHHHHCCCeEEEecCcHHHHHHH----HHhC---CcceeeecccchhhhccC------Ccccc
Confidence            45677766 8999999999999999999999998665543    3332   345678999998776551      12567


Q ss_pred             EEEEccc
Q 044010          128 HLVNNAG  134 (248)
Q Consensus       128 ~vv~~ag  134 (248)
                      .+|...+
T Consensus        67 ~vi~~~~   73 (134)
T d2hmva1          67 YVIVAIG   73 (134)
T ss_dssp             EEEECCC
T ss_pred             EEEEEcC
Confidence            7766543

>d1npya1 c.2.1.7 (A:103-269) Shikimate 5-dehydrogenase-like protein HI0607 {Haemophilus influenzae [TaxId: 727]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Aminoacid dehydrogenase-like, C-terminal domain
domain: Shikimate 5-dehydrogenase-like protein HI0607
species: Haemophilus influenzae [TaxId: 727]

Probab=97.28  E-value=0.00054  Score=50.97  Aligned_cols=45  Identities=22%  Similarity=0.326  Sum_probs=39.0

Q ss_pred             CCCEEEEcCCCChHHHHHHHHHHHcCC-eEEEEeCCcchHHHHHHHH
Q 044010           46 SGKVVIITGASSGIGEHLAYEYARRGA-CLALCARREKSLEEVADTA   91 (248)
Q Consensus        46 ~~k~~lVtGg~~gIG~aia~~l~~~G~-~V~l~~r~~~~~~~~~~~l   91 (248)
                      ++|.++|.|+ ||-+++++..|.+.|+ +|.+..|+.++.+...+.+
T Consensus        16 ~~~~vlIlGa-GGaarai~~aL~~~g~~~I~I~nR~~~ka~~L~~~~   61 (167)
T d1npya1          16 KNAKVIVHGS-GGMAKAVVAAFKNSGFEKLKIYARNVKTGQYLAALY   61 (167)
T ss_dssp             TTSCEEEECS-STTHHHHHHHHHHTTCCCEEEECSCHHHHHHHHHHH
T ss_pred             CCCeEEEECC-CHHHHHHHHHHHHCCCCEEEEecccHHHHHHHHHhh
Confidence            6788999977 9999999999999997 8999999998777766544

>d1jvba2 c.2.1.1 (A:144-313) Alcohol dehydrogenase {Archaeon Sulfolobus solfataricus [TaxId: 2287]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Alcohol dehydrogenase-like, C-terminal domain
domain: Alcohol dehydrogenase
species: Archaeon Sulfolobus solfataricus [TaxId: 2287]

Probab=97.28  E-value=0.00053  Score=50.88  Aligned_cols=80  Identities=18%  Similarity=0.232  Sum_probs=53.9

Q ss_pred             CCCEEEEcCCCChHHHHHHHHHHHcCC-eEEEEeCCcchHHHHHHHHHhhCCCcEEEEEccCCCHHHHHHHHHHHHhHcC
Q 044010           46 SGKVVIITGASSGIGEHLAYEYARRGA-CLALCARREKSLEEVADTAREIGSPDVITIRADVSKVDDCRSLVEETMNHFG  124 (248)
Q Consensus        46 ~~k~~lVtGg~~gIG~aia~~l~~~G~-~V~l~~r~~~~~~~~~~~l~~~~~~~v~~~~~D~~~~~~~~~~~~~~~~~~g  124 (248)
                      +|.+++|.|++|++|...+..+...|+ +|+++++++++.+..    ++.+. .   ...|.++.+-.++..+..  .-+
T Consensus        27 ~g~~vlV~G~~G~vG~~~~~~~~~~g~~~V~~~~~~~~~~~~~----~~~Ga-~---~~i~~~~~~~~~~~~~~~--~~~   96 (170)
T d1jvba2          27 PTKTLLVVGAGGGLGTMAVQIAKAVSGATIIGVDVREEAVEAA----KRAGA-D---YVINASMQDPLAEIRRIT--ESK   96 (170)
T ss_dssp             TTCEEEEETTTSHHHHHHHHHHHHHTCCEEEEEESSHHHHHHH----HHHTC-S---EEEETTTSCHHHHHHHHT--TTS
T ss_pred             CCCEEEEEeccccceeeeeecccccccccccccccchhhHHHH----HHcCC-c---eeeccCCcCHHHHHHHHh--hcc
Confidence            578999999999999999998888886 888998887654433    33343 2   223445544344433321  123


Q ss_pred             CccEEEEcccc
Q 044010          125 RLDHLVNNAGI  135 (248)
Q Consensus       125 ~id~vv~~ag~  135 (248)
                      .+|+++.++|.
T Consensus        97 ~~d~vid~~g~  107 (170)
T d1jvba2          97 GVDAVIDLNNS  107 (170)
T ss_dssp             CEEEEEESCCC
T ss_pred             cchhhhccccc
Confidence            69999999874

>d1pl8a2 c.2.1.1 (A:146-316) Ketose reductase (sorbitol dehydrogenase) {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Alcohol dehydrogenase-like, C-terminal domain
domain: Ketose reductase (sorbitol dehydrogenase)
species: Human (Homo sapiens) [TaxId: 9606]

Probab=97.26  E-value=0.0011  Score=49.29  Aligned_cols=80  Identities=19%  Similarity=0.325  Sum_probs=53.9

Q ss_pred             CCCEEEEcCCCChHHHHHHHHHHHcCC-eEEEEeCCcchHHHHHHHHHhhCCCcEEEEEccCCCHHHHHHHHHHHHhHcC
Q 044010           46 SGKVVIITGASSGIGEHLAYEYARRGA-CLALCARREKSLEEVADTAREIGSPDVITIRADVSKVDDCRSLVEETMNHFG  124 (248)
Q Consensus        46 ~~k~~lVtGg~~gIG~aia~~l~~~G~-~V~l~~r~~~~~~~~~~~l~~~~~~~v~~~~~D~~~~~~~~~~~~~~~~~~g  124 (248)
                      +|.+++|.|+ |++|...+..+...|+ +|+++++++++++-+    ++.+. . .++..+-.+   ..+..+.+....|
T Consensus        26 ~gd~VlI~G~-G~iG~~~~~~a~~~G~~~Vi~~d~~~~rl~~a----~~~Ga-~-~~~~~~~~~---~~~~~~~~~~~~g   95 (171)
T d1pl8a2          26 LGHKVLVCGA-GPIGMVTLLVAKAMGAAQVVVTDLSATRLSKA----KEIGA-D-LVLQISKES---PQEIARKVEGQLG   95 (171)
T ss_dssp             TTCEEEEECC-SHHHHHHHHHHHHTTCSEEEEEESCHHHHHHH----HHTTC-S-EEEECSSCC---HHHHHHHHHHHHT
T ss_pred             CCCEEEEECC-CccHHHHHHHHHHcCCceEEeccCCHHHHHHH----HHhCC-c-ccccccccc---cccccccccccCC
Confidence            5779999976 9999999988888999 799999998766543    23332 2 223233333   3344444444444


Q ss_pred             -CccEEEEcccc
Q 044010          125 -RLDHLVNNAGI  135 (248)
Q Consensus       125 -~id~vv~~ag~  135 (248)
                       .+|++|.++|.
T Consensus        96 ~g~Dvvid~~G~  107 (171)
T d1pl8a2          96 CKPEVTIECTGA  107 (171)
T ss_dssp             SCCSEEEECSCC
T ss_pred             CCceEEEeccCC
Confidence             79999999874

>d2ldxa1 c.2.1.5 (A:1-159) Lactate dehydrogenase {Mouse (Mus musculus) [TaxId: 10090]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: LDH N-terminal domain-like
domain: Lactate dehydrogenase
species: Mouse (Mus musculus) [TaxId: 10090]

Probab=97.19  E-value=0.0041  Score=45.70  Aligned_cols=117  Identities=19%  Similarity=0.196  Sum_probs=72.3

Q ss_pred             ccCCCCCEEEEcCCCChHHHHHHHHHHHcCC--eEEEEeCCcchHHHHHHHHHhhC---CCcEEEEEccCCCHHHHHHHH
Q 044010           42 SEDVSGKVVIITGASSGIGEHLAYEYARRGA--CLALCARREKSLEEVADTAREIG---SPDVITIRADVSKVDDCRSLV  116 (248)
Q Consensus        42 ~~~~~~k~~lVtGg~~gIG~aia~~l~~~G~--~V~l~~r~~~~~~~~~~~l~~~~---~~~v~~~~~D~~~~~~~~~~~  116 (248)
                      ...++..++.|.|+ |.+|..+|..|+.+|.  ++++.++++++++.....+....   +........|.   +      
T Consensus        14 ~~~~~~~KI~IIGa-G~VG~~~A~~l~~~~l~~elvL~D~~~~~a~g~alDl~~~~~~~~~~~~~~~~d~---~------   83 (159)
T d2ldxa1          14 EDKLSRCKITVVGV-GDVGMACAISILLKGLADELALVDADTDKLRGEALDLQHGSLFLSTPKIVFGKDY---N------   83 (159)
T ss_dssp             CCCCCCCEEEEECC-SHHHHHHHHHHHTTTSCSEEEEECSCHHHHHHHHHHHHHTTTTCSCCEEEEESSG---G------
T ss_pred             cccCCCCeEEEECC-CHHHHHHHHHHHhcCCCCEEEEEeCCchhhhccHHHHhCcchhcCCCeEEeccch---h------
Confidence            34567777888885 9999999999999875  79999999887776665665422   22222233332   1      


Q ss_pred             HHHHhHcCCccEEEEccccCCcccccccCChHHHHHHHHhhhHHHHHHHHHHhhhhhhc--CCeEEEEcC
Q 044010          117 EETMNHFGRLDHLVNNAGISSVALFEDIVNITDFKQIMNINFWGSVYTTRFAVPHLRYT--KGKIVVLSS  184 (248)
Q Consensus       117 ~~~~~~~g~id~vv~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~--~g~iV~isS  184 (248)
                           +..+-|++|..||...... .+.   .   +.+..    ...+++.+.+.+.+.  ++.++++|.
T Consensus        84 -----~~~~adivvitag~~~~~~-~~R---~---dll~~----N~~i~~~i~~~i~~~~p~~ivivvtN  137 (159)
T d2ldxa1          84 -----VSANSKLVIITAGARMVSG-QTR---L---DLLQR----NVAIMKAIVPGVIQNSPDCKIIVVTN  137 (159)
T ss_dssp             -----GGTTEEEEEECCSCCCCTT-TCS---S---CTTHH----HHHHHHHHTTTHHHHSTTCEEEECSS
T ss_pred             -----hhccccEEEEecccccCCC-CCH---H---HHHHH----HHHHHHHHHHHHhccCCCeEEEEeCC
Confidence                 2347899999999754332 111   1   11222    333456666665432  366666663

>d1hyha1 c.2.1.5 (A:21-166) L-2-hydroxyisocapronate dehydrogenase, L-HICDH {Lactobacillus confusus [TaxId: 1583]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: LDH N-terminal domain-like
domain: L-2-hydroxyisocapronate dehydrogenase, L-HICDH
species: Lactobacillus confusus [TaxId: 1583]

Probab=97.15  E-value=0.0024  Score=46.27  Aligned_cols=114  Identities=13%  Similarity=0.115  Sum_probs=66.9

Q ss_pred             CEEEEcCCCChHHHHHHHHHHHcCC--eEEEEeCCcchHHHHHHHHHhh---CCCcEEEEEccCCCHHHHHHHHHHHHhH
Q 044010           48 KVVIITGASSGIGEHLAYEYARRGA--CLALCARREKSLEEVADTAREI---GSPDVITIRADVSKVDDCRSLVEETMNH  122 (248)
Q Consensus        48 k~~lVtGg~~gIG~aia~~l~~~G~--~V~l~~r~~~~~~~~~~~l~~~---~~~~v~~~~~D~~~~~~~~~~~~~~~~~  122 (248)
                      |++.|.|+ |.+|.++|..|+.+|.  ++++.++++++++.....+.+.   ..........|   .+           .
T Consensus         2 kKI~IIGa-G~VG~~~a~~l~~~~~~~elvL~Di~~~~~~g~~~Dl~~a~~~~~~~~~~~~~d---~~-----------~   66 (146)
T d1hyha1           2 RKIGIIGL-GNVGAAVAHGLIAQGVADDYVFIDANEAKVKADQIDFQDAMANLEAHGNIVIND---WA-----------A   66 (146)
T ss_dssp             CEEEEECC-SHHHHHHHHHHHHHTCCSEEEEECSSHHHHHHHHHHHHHHGGGSSSCCEEEESC---GG-----------G
T ss_pred             CeEEEECc-CHHHHHHHHHHHhcCCCceEEEEecccchhhhHHHhhhccccccCCccceeccC---HH-----------H
Confidence            56778885 9999999999999874  8999999988776655555432   22223333333   32           2


Q ss_pred             cCCccEEEEccccCCcccccccCChHHHHHHHHhhhHHHHHHHHHHhhhhhhc--CCeEEEEc
Q 044010          123 FGRLDHLVNNAGISSVALFEDIVNITDFKQIMNINFWGSVYTTRFAVPHLRYT--KGKIVVLS  183 (248)
Q Consensus       123 ~g~id~vv~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~--~g~iV~is  183 (248)
                      ..+-|++|.+||...+... .  .-++-.+.+..|.    .+++.+.+.+++.  ++.++++|
T Consensus        67 l~~adiVVitaG~~~~~~~-~--~g~~R~~l~~~N~----~i~~~i~~~i~~~~p~aivivvt  122 (146)
T d1hyha1          67 LADADVVISTLGNIKLQQD-N--PTGDRFAELKFTS----SMVQSVGTNLKESGFHGVLVVIS  122 (146)
T ss_dssp             GTTCSEEEECCSCGGGTC----------CTTHHHHH----HHHHHHHHHHHHTTCCSEEEECS
T ss_pred             hccccEEEEeccccccccc-c--CCccHHHHHHHHH----HHHHHHHHHHhhcCCCeEEEEec
Confidence            2478999999997532210 0  0011122333443    3445555555433  35666666

>d1mlda1 c.2.1.5 (A:1-144) Malate dehydrogenase {Pig (Sus scrofa) [TaxId: 9823]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: LDH N-terminal domain-like
domain: Malate dehydrogenase
species: Pig (Sus scrofa) [TaxId: 9823]

Probab=97.15  E-value=0.0012  Score=47.90  Aligned_cols=115  Identities=19%  Similarity=0.167  Sum_probs=65.6

Q ss_pred             EEEEcCCCChHHHHHHHHHHHcCC--eEEEEeCCcchHHHHHHHHHhhCCCcEEEEEccCCCHHHHHHHHHHHHhHcCCc
Q 044010           49 VVIITGASSGIGEHLAYEYARRGA--CLALCARREKSLEEVADTAREIGSPDVITIRADVSKVDDCRSLVEETMNHFGRL  126 (248)
Q Consensus        49 ~~lVtGg~~gIG~aia~~l~~~G~--~V~l~~r~~~~~~~~~~~l~~~~~~~v~~~~~D~~~~~~~~~~~~~~~~~~g~i  126 (248)
                      ++.|+|++|.+|.++|..|+.+|.  ++++.+.++.+.+.  ..+..... .. ....-+ ...+..+.+       ..-
T Consensus         2 Kv~IiGA~G~VG~~~A~~l~~~~~~~elvLiDi~~~~~~a--~Dl~~~~~-~~-~~~~~~-~~~~~~~~~-------~~a   69 (144)
T d1mlda1           2 KVAVLGASGGIGQPLSLLLKNSPLVSRLTLYDIAHTPGVA--ADLSHIET-RA-TVKGYL-GPEQLPDCL-------KGC   69 (144)
T ss_dssp             EEEEETTTSTTHHHHHHHHHTCTTCSEEEEEESSSHHHHH--HHHTTSSS-SC-EEEEEE-SGGGHHHHH-------TTC
T ss_pred             eEEEECCCChHHHHHHHHHHhCCccceEEEEeccccchhh--HHHhhhhh-hc-CCCeEE-cCCChHHHh-------CCC
Confidence            578899999999999999999886  79999987654332  23322111 11 111111 223333322       379


Q ss_pred             cEEEEccccCCcccccccCChHHHHHHHHhhhHHHHHHHHHHhhhhhhcCCeEEEEcC
Q 044010          127 DHLVNNAGISSVALFEDIVNITDFKQIMNINFWGSVYTTRFAVPHLRYTKGKIVVLSS  184 (248)
Q Consensus       127 d~vv~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~g~iV~isS  184 (248)
                      |++|..+|..... -.   +   -.+.+..|..-.-.+.+.+.++  ..++.++++|.
T Consensus        70 DivVitag~~~~~-g~---s---R~~ll~~N~~i~~~i~~~i~~~--~p~~iiivvtN  118 (144)
T d1mlda1          70 DVVVIPAGVPRKP-GM---T---RDDLFNTNATIVATLTAACAQH--CPDAMICIISN  118 (144)
T ss_dssp             SEEEECCSCCCCT-TC---C---GGGGHHHHHHHHHHHHHHHHHH--CTTSEEEECSS
T ss_pred             CEEEECCCcCCCC-CC---C---cchHHHHHHHHHHHHHHHHHhc--CCCeEEEEecC
Confidence            9999999974322 11   2   1234555655554444444333  12466776664

>d2jhfa2 c.2.1.1 (A:164-339) Alcohol dehydrogenase {Horse (Equus caballus) [TaxId: 9796]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Alcohol dehydrogenase-like, C-terminal domain
domain: Alcohol dehydrogenase
species: Horse (Equus caballus) [TaxId: 9796]

Probab=97.14  E-value=0.00074  Score=50.39  Aligned_cols=79  Identities=15%  Similarity=0.238  Sum_probs=53.3

Q ss_pred             CCCEEEEcCCCChHHHHHHHHHHHcCC-eEEEEeCCcchHHHHHHHHHhhCCCcEEEEEccCCCH-HHHHHHHHHHHhHc
Q 044010           46 SGKVVIITGASSGIGEHLAYEYARRGA-CLALCARREKSLEEVADTAREIGSPDVITIRADVSKV-DDCRSLVEETMNHF  123 (248)
Q Consensus        46 ~~k~~lVtGg~~gIG~aia~~l~~~G~-~V~l~~r~~~~~~~~~~~l~~~~~~~v~~~~~D~~~~-~~~~~~~~~~~~~~  123 (248)
                      +|.+++|.|+ +|+|...+.++...|+ +|+++++++++.+...    +.+. .   ...|..+. +.+.+..+..  ..
T Consensus        28 ~GdtVlV~Ga-GG~G~~~~~~~~~~g~~~Vi~~~~~~~k~~~a~----~~Ga-~---~~i~~~~~~~~~~~~~~~~--~~   96 (176)
T d2jhfa2          28 QGSTCAVFGL-GGVGLSVIMGCKAAGAARIIGVDINKDKFAKAK----EVGA-T---ECVNPQDYKKPIQEVLTEM--SN   96 (176)
T ss_dssp             TTCEEEEECC-SHHHHHHHHHHHHTTCSEEEEECSCGGGHHHHH----HTTC-S---EEECGGGCSSCHHHHHHHH--TT
T ss_pred             CCCEEEEECC-CCcHHHHHHHHHHcCCceEEeecCcHHHHHHHH----HhCC-e---eEEecCCchhHHHHHHHHH--hc
Confidence            6789999988 7899999999999986 8999999988766432    2232 1   11233222 2244444333  22


Q ss_pred             CCccEEEEcccc
Q 044010          124 GRLDHLVNNAGI  135 (248)
Q Consensus       124 g~id~vv~~ag~  135 (248)
                      +.+|++|.+.|.
T Consensus        97 ~G~D~vid~~G~  108 (176)
T d2jhfa2          97 GGVDFSFEVIGR  108 (176)
T ss_dssp             SCBSEEEECSCC
T ss_pred             CCCCEEEecCCc
Confidence            479999999875

>d1hyea1 c.2.1.5 (A:1-145) MJ0490, lactate/malate dehydrogenase {Archaeon Methanococcus jannaschii [TaxId: 2190]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: LDH N-terminal domain-like
domain: MJ0490, lactate/malate dehydrogenase
species: Archaeon Methanococcus jannaschii [TaxId: 2190]

Probab=97.13  E-value=0.0073  Score=43.55  Aligned_cols=114  Identities=18%  Similarity=0.139  Sum_probs=64.7

Q ss_pred             EEEEcCCCChHHHHHHHHHHHcCC--eEEEEeCCcc--hHHHHHHHHHhh---CCCcEEEEEccCCCHHHHHHHHHHHHh
Q 044010           49 VVIITGASSGIGEHLAYEYARRGA--CLALCARREK--SLEEVADTAREI---GSPDVITIRADVSKVDDCRSLVEETMN  121 (248)
Q Consensus        49 ~~lVtGg~~gIG~aia~~l~~~G~--~V~l~~r~~~--~~~~~~~~l~~~---~~~~v~~~~~D~~~~~~~~~~~~~~~~  121 (248)
                      ++.|.|++|.+|.++|..|+.+|.  ++++.+++++  +.+.....+...   ....+.....--.+.           +
T Consensus         2 KV~IiGA~G~VG~~~a~~l~~~~l~~el~L~D~~~~~~~~~g~a~Dl~~~~~~~~~~~~~~~~~~~d~-----------~   70 (145)
T d1hyea1           2 KVTIIGASGRVGSATALLLAKEPFMKDLVLIGREHSINKLEGLREDIYDALAGTRSDANIYVESDENL-----------R   70 (145)
T ss_dssp             EEEEETTTSHHHHHHHHHHHTCTTCCEEEEEECGGGHHHHHHHHHHHHHHHTTSCCCCEEEEEETTCG-----------G
T ss_pred             EEEEECCCChHHHHHHHHHHhCCcccccccccchhhhHhhhcccccchhcccccccCCccccCCcchH-----------H
Confidence            478999999999999999999984  8999999864  233333344431   112222221111122           2


Q ss_pred             HcCCccEEEEccccCCcccccccCChHHHHHHHHhhhHHHHHHHHHHhhhhhhcCCeEEEEc
Q 044010          122 HFGRLDHLVNNAGISSVALFEDIVNITDFKQIMNINFWGSVYTTRFAVPHLRYTKGKIVVLS  183 (248)
Q Consensus       122 ~~g~id~vv~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~g~iV~is  183 (248)
                      ...+-|++|.+||......    .+   -.+.+..|..-.-.+.+.+.++   .+..++.+|
T Consensus        71 ~l~~aDvVVitAG~~~~~g----~s---R~dl~~~Na~iv~~i~~~i~~~---~~~~iivVt  122 (145)
T d1hyea1          71 IIDESDVVIITSGVPRKEG----MS---RMDLAKTNAKIVGKYAKKIAEI---CDTKIFVIT  122 (145)
T ss_dssp             GGTTCSEEEECCSCCCCTT----CC---HHHHHHHHHHHHHHHHHHHHHH---CCCEEEECS
T ss_pred             HhccceEEEEecccccCCC----CC---hhhhhhhhHHHHHHHHHHHhcc---CCCeEEEEc
Confidence            2347999999999743221    12   2345555655544444444332   234455443

>d1vj1a2 c.2.1.1 (A:125-311) Putative zinc-binding alcohol dehydrogenase {Mouse (Mus musculus) [TaxId: 10090]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Alcohol dehydrogenase-like, C-terminal domain
domain: Putative zinc-binding alcohol dehydrogenase
species: Mouse (Mus musculus) [TaxId: 10090]

Probab=97.10  E-value=0.00036  Score=52.90  Aligned_cols=79  Identities=15%  Similarity=0.222  Sum_probs=49.8

Q ss_pred             CCCEEEEcCCCChHHHHHHHHHHHcCCeEEE-EeCCcchHHHHHHHHHhhCCCcEEEEEccCCCHHHHHHHHHHHHhHcC
Q 044010           46 SGKVVIITGASSGIGEHLAYEYARRGACLAL-CARREKSLEEVADTAREIGSPDVITIRADVSKVDDCRSLVEETMNHFG  124 (248)
Q Consensus        46 ~~k~~lVtGg~~gIG~aia~~l~~~G~~V~l-~~r~~~~~~~~~~~l~~~~~~~v~~~~~D~~~~~~~~~~~~~~~~~~g  124 (248)
                      +++++||+||+||+|...++-.-..|+++++ +++.+++.....++   .+. .   ...|.++.+ ..+.++++..  .
T Consensus        30 ~~etVLI~gaaGgVG~~aiQlak~~Ga~~vi~~~~~~e~~~~l~~~---~ga-d---~vi~~~~~~-~~~~~~~~~~--~   99 (187)
T d1vj1a2          30 SNQTMVVSGAAGACGSLAGQIGHLLGCSRVVGICGTQEKCLFLTSE---LGF-D---AAVNYKTGN-VAEQLREACP--G   99 (187)
T ss_dssp             SCCEEEESSTTSTTGGGHHHHHHHTTCSEEEEEESSHHHHHHHHHH---SCC-S---EEEETTSSC-HHHHHHHHCT--T
T ss_pred             CCCEEEEECCCchhhHHHHHHHHHcCCcceecccchHHHHhhhhhc---ccc-e---EEeeccchh-HHHHHHHHhc--c
Confidence            3589999999999999988877678986544 45554443333222   232 2   334665543 3333343322  3


Q ss_pred             CccEEEEccc
Q 044010          125 RLDHLVNNAG  134 (248)
Q Consensus       125 ~id~vv~~ag  134 (248)
                      .+|+++.+.|
T Consensus       100 GvDvv~D~vG  109 (187)
T d1vj1a2         100 GVDVYFDNVG  109 (187)
T ss_dssp             CEEEEEESSC
T ss_pred             CceEEEecCC
Confidence            6999999986

>d1i0za1 c.2.1.5 (A:1-160) Lactate dehydrogenase {Human (Homo sapiens), heart isoform (H chain) [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: LDH N-terminal domain-like
domain: Lactate dehydrogenase
species: Human (Homo sapiens), heart isoform (H chain) [TaxId: 9606]

Probab=97.07  E-value=0.0044  Score=45.58  Aligned_cols=116  Identities=18%  Similarity=0.165  Sum_probs=71.2

Q ss_pred             cCCCCCEEEEcCCCChHHHHHHHHHHHcCC--eEEEEeCCcchHHHHHHHHHhh---CCCcEEEEEccCCCHHHHHHHHH
Q 044010           43 EDVSGKVVIITGASSGIGEHLAYEYARRGA--CLALCARREKSLEEVADTAREI---GSPDVITIRADVSKVDDCRSLVE  117 (248)
Q Consensus        43 ~~~~~k~~lVtGg~~gIG~aia~~l~~~G~--~V~l~~r~~~~~~~~~~~l~~~---~~~~v~~~~~D~~~~~~~~~~~~  117 (248)
                      ..++++++-|.|+ |.+|.++|..|+.+|.  ++++.+++++..+.....+...   .+........|   .+       
T Consensus        16 ~~~~~~KV~IIGa-G~VG~~~A~~l~~~~l~~ElvLiD~~~~~a~g~alDl~h~~~~~~~~~~~~~~d---~~-------   84 (160)
T d1i0za1          16 ATVPNNKITVVGV-GQVGMACAISILGKSLADELALVDVLEDKLKGEMMDLQHGSLFLQTPKIVADKD---YS-------   84 (160)
T ss_dssp             CCCCSSEEEEECC-SHHHHHHHHHHHHTTCCSEEEEECSCHHHHHHHHHHHHHTGGGCCCSEEEECSS---GG-------
T ss_pred             ccCCCCeEEEECC-CHHHHHHHHHHHhcCCCcEEEEEEeccchhHHHHHHHhccccccCCCeEEeccc---hh-------
Confidence            3456778888886 9999999999999986  8999999987776555555432   12222222222   22       


Q ss_pred             HHHhHcCCccEEEEccccCCcccccccCChHHHHHHHHhhhHHHHHHHHHHhhhhhhc--CCeEEEEcC
Q 044010          118 ETMNHFGRLDHLVNNAGISSVALFEDIVNITDFKQIMNINFWGSVYTTRFAVPHLRYT--KGKIVVLSS  184 (248)
Q Consensus       118 ~~~~~~g~id~vv~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~--~g~iV~isS  184 (248)
                          +..+-|++|..||..... -.   +..   +.+..|..    +++.+.+.+.+.  ++-++++|.
T Consensus        85 ----~~~~adiVVitAg~~~~~-g~---tR~---~l~~~N~~----i~~~i~~~i~~~~p~aiiivvtN  138 (160)
T d1i0za1          85 ----VTANSKIVVVTAGVRQQE-GE---SRL---NLVQRNVN----VFKFIIPQIVKYSPDCIIIVVSN  138 (160)
T ss_dssp             ----GGTTCSEEEECCSCCCCT-TC---CGG---GGHHHHHH----HHHHHHHHHHHHCTTCEEEECSS
T ss_pred             ----hcccccEEEEecCCcccc-Cc---chH---HHHHHHHH----HHHHHHHHHHhcCCCcEEEEeCC
Confidence                224799999999975422 11   212   23333433    455555555432  356666663

>d1id1a_ c.2.1.9 (A:) Rck domain from putative potassium channel Kch {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Potassium channel NAD-binding domain
domain: Rck domain from putative potassium channel Kch
species: Escherichia coli [TaxId: 562]

Probab=97.06  E-value=0.0014  Score=47.67  Aligned_cols=75  Identities=11%  Similarity=0.091  Sum_probs=56.9

Q ss_pred             EEEEcCCCChHHHHHHHHHHHcCCeEEEEeCCcchHHHHHHHHHhhCCCcEEEEEccCCCHHHHHHHHHHHHhHcCCccE
Q 044010           49 VVIITGASSGIGEHLAYEYARRGACLALCARREKSLEEVADTAREIGSPDVITIRADVSKVDDCRSLVEETMNHFGRLDH  128 (248)
Q Consensus        49 ~~lVtGg~~gIG~aia~~l~~~G~~V~l~~r~~~~~~~~~~~l~~~~~~~v~~~~~D~~~~~~~~~~~~~~~~~~g~id~  128 (248)
                      .++|.|. |.+|..+++.|.++|.++++++.++++.....++...   ..+.++..|.++++.++++-      ..+.+.
T Consensus         5 HiII~G~-g~~g~~l~~~L~~~~~~v~vId~d~~~~~~~~~~~~~---~~~~vi~Gd~~d~~~L~~a~------i~~a~~   74 (153)
T d1id1a_           5 HFIVCGH-SILAINTILQLNQRGQNVTVISNLPEDDIKQLEQRLG---DNADVIPGDSNDSSVLKKAG------IDRCRA   74 (153)
T ss_dssp             CEEEECC-SHHHHHHHHHHHHTTCCEEEEECCCHHHHHHHHHHHC---TTCEEEESCTTSHHHHHHHT------TTTCSE
T ss_pred             EEEEECC-CHHHHHHHHHHHHcCCCEEEEeccchhHHHHHHHhhc---CCcEEEEccCcchHHHHHhc------cccCCE
Confidence            5777877 7999999999999999999999988765555554432   25788999999997665542      236777


Q ss_pred             EEEcc
Q 044010          129 LVNNA  133 (248)
Q Consensus       129 vv~~a  133 (248)
                      +|...
T Consensus        75 vi~~~   79 (153)
T d1id1a_          75 ILALS   79 (153)
T ss_dssp             EEECS
T ss_pred             EEEcc
Confidence            76664

>d1jqba2 c.2.1.1 (A:1140-1313) Bacterial secondary alcohol dehydrogenase {Clostridium beijerinckii [TaxId: 1520]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Alcohol dehydrogenase-like, C-terminal domain
domain: Bacterial secondary alcohol dehydrogenase
species: Clostridium beijerinckii [TaxId: 1520]

Probab=97.02  E-value=0.0003  Score=52.82  Aligned_cols=77  Identities=17%  Similarity=0.131  Sum_probs=51.4

Q ss_pred             CCCEEEEcCCCChHHHHHHHHHHHcCC-eEEEEeCCcchHHHHHHHHHhhCCCcEEEEEccCCCHHHHHHHHHHHHhHc-
Q 044010           46 SGKVVIITGASSGIGEHLAYEYARRGA-CLALCARREKSLEEVADTAREIGSPDVITIRADVSKVDDCRSLVEETMNHF-  123 (248)
Q Consensus        46 ~~k~~lVtGg~~gIG~aia~~l~~~G~-~V~l~~r~~~~~~~~~~~l~~~~~~~v~~~~~D~~~~~~~~~~~~~~~~~~-  123 (248)
                      +|.+++|.|+ |++|...++.+...|+ +|+++++++++.+.+.    +.+-.    ..+|.++.+..+    ++.+.. 
T Consensus        27 ~g~~VlI~Ga-G~vGl~~~q~ak~~Ga~~Vi~~d~~~~r~~~a~----~lGa~----~~i~~~~~~~~~----~v~~~t~   93 (174)
T d1jqba2          27 MGSSVVVIGI-GAVGLMGIAGAKLRGAGRIIGVGSRPICVEAAK----FYGAT----DILNYKNGHIED----QVMKLTN   93 (174)
T ss_dssp             TTCCEEEECC-SHHHHHHHHHHHTTTCSCEEEECCCHHHHHHHH----HHTCS----EEECGGGSCHHH----HHHHHTT
T ss_pred             CCCEEEEEcC-CcchhhhhhhhhcccccccccccchhhhHHHHH----hhCcc----ccccccchhHHH----HHHHHhh
Confidence            5788999976 8999998888888898 7999999876655432    23321    224555433232    233322 


Q ss_pred             -CCccEEEEcccc
Q 044010          124 -GRLDHLVNNAGI  135 (248)
Q Consensus       124 -g~id~vv~~ag~  135 (248)
                       ..+|++|.++|.
T Consensus        94 g~G~D~vid~~g~  106 (174)
T d1jqba2          94 GKGVDRVIMAGGG  106 (174)
T ss_dssp             TSCEEEEEECSSC
T ss_pred             ccCcceEEEccCC
Confidence             259999999985

>d1o6za1 c.2.1.5 (A:22-162) Malate dehydrogenase {Archaeon Haloarcula marismortui [TaxId: 2238]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: LDH N-terminal domain-like
domain: Malate dehydrogenase
species: Archaeon Haloarcula marismortui [TaxId: 2238]

Probab=96.95  E-value=0.008  Score=43.19  Aligned_cols=110  Identities=15%  Similarity=0.040  Sum_probs=65.4

Q ss_pred             EEEEcCCCChHHHHHHHHHHHcCC--eEEEEeCCc--chHHHHHHHHHh--hCCCcEEEEEccCCCHHHHHHHHHHHHhH
Q 044010           49 VVIITGASSGIGEHLAYEYARRGA--CLALCARRE--KSLEEVADTARE--IGSPDVITIRADVSKVDDCRSLVEETMNH  122 (248)
Q Consensus        49 ~~lVtGg~~gIG~aia~~l~~~G~--~V~l~~r~~--~~~~~~~~~l~~--~~~~~v~~~~~D~~~~~~~~~~~~~~~~~  122 (248)
                      ++.|+|++|.+|.++|..++.+|.  ++++.+.+.  +..+.....+..  ...........|.   +           +
T Consensus         2 KV~IiGaaG~VG~~~A~~l~~~~l~~el~L~Di~~~~~~~~g~a~Dl~~~~~~~~~~~i~~~~~---~-----------~   67 (142)
T d1o6za1           2 KVSVVGAAGTVGAAAGYNIALRDIADEVVFVDIPDKEDDTVGQAADTNHGIAYDSNTRVRQGGY---E-----------D   67 (142)
T ss_dssp             EEEEETTTSHHHHHHHHHHHHTTCCSEEEEECCGGGHHHHHHHHHHHHHHHTTTCCCEEEECCG---G-----------G
T ss_pred             eEEEECCCCcHHHHHHHHHHhCCCCCEEEEEecCCcccccceeecchhhcccccCCceEeeCCH---H-----------H
Confidence            577899999999999999999986  799988643  333333333432  1222344443333   2           1


Q ss_pred             cCCccEEEEccccCCcccccccCChHHHHHHHHhhhHHHHHHHHHHhhhhhhc--CCeEEEEc
Q 044010          123 FGRLDHLVNNAGISSVALFEDIVNITDFKQIMNINFWGSVYTTRFAVPHLRYT--KGKIVVLS  183 (248)
Q Consensus       123 ~g~id~vv~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~--~g~iV~is  183 (248)
                      ..+-|++|.+||..... -      ++-.+.+..|..-    ++.+.+.+.+.  ++.++.+|
T Consensus        68 ~~~aDiVvitaG~~~~~-g------~~R~dl~~~N~~I----~~~i~~~i~~~~p~~i~ivvt  119 (142)
T d1o6za1          68 TAGSDVVVITAGIPRQP-G------QTRIDLAGDNAPI----MEDIQSSLDEHNDDYISLTTS  119 (142)
T ss_dssp             GTTCSEEEECCCCCCCT-T------CCHHHHHHHHHHH----HHHHHHHHHTTCSCCEEEECC
T ss_pred             hhhcCEEEEeccccccc-C------CchhhHHHHHHHH----HHHHHHHHHhcCCCceEEEec
Confidence            24799999999964321 1      1233445555444    45555555433  36666665

>d1y6ja1 c.2.1.5 (A:7-148) Lactate dehydrogenase {Clostridium thermocellum [TaxId: 1515]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: LDH N-terminal domain-like
domain: Lactate dehydrogenase
species: Clostridium thermocellum [TaxId: 1515]

Probab=96.95  E-value=0.0039  Score=44.90  Aligned_cols=111  Identities=20%  Similarity=0.108  Sum_probs=60.7

Q ss_pred             EEEEcCCCChHHHHHHHHHHHcCC--eEEEEeCCcchHHHHHHHHHhhCC--CcEEEEEccCCCHHHHHHHHHHHHhHcC
Q 044010           49 VVIITGASSGIGEHLAYEYARRGA--CLALCARREKSLEEVADTAREIGS--PDVITIRADVSKVDDCRSLVEETMNHFG  124 (248)
Q Consensus        49 ~~lVtGg~~gIG~aia~~l~~~G~--~V~l~~r~~~~~~~~~~~l~~~~~--~~v~~~~~D~~~~~~~~~~~~~~~~~~g  124 (248)
                      ++.|.|+ |.+|.++|..++.+|.  ++++.++++++++.....+.+...  ........   +.           ++..
T Consensus         3 KI~IIGa-G~VG~~~a~~l~~~~l~~el~L~D~~~~~~~g~a~Dl~~~~~~~~~~~~~~~---~~-----------~~~~   67 (142)
T d1y6ja1           3 KVAIIGA-GFVGASAAFTMALRQTANELVLIDVFKEKAIGEAMDINHGLPFMGQMSLYAG---DY-----------SDVK   67 (142)
T ss_dssp             CEEEECC-SHHHHHHHHHHHHTTCSSEEEEECCC---CCHHHHHHTTSCCCTTCEEEC-----CG-----------GGGT
T ss_pred             eEEEECC-CHHHHHHHHHHHhcCCCCEEEEEeccCCccceeeeeeccCcccCCCeeEeeC---cH-----------HHhC
Confidence            4555586 9999999999999875  899999998876655555554221  12222222   22           2234


Q ss_pred             CccEEEEccccCCcccccccCChHHHHHHHHhhhHHHHHHHHHHhhhhhhcCCeEEEEc
Q 044010          125 RLDHLVNNAGISSVALFEDIVNITDFKQIMNINFWGSVYTTRFAVPHLRYTKGKIVVLS  183 (248)
Q Consensus       125 ~id~vv~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~g~iV~is  183 (248)
                      +-|++|.+||..... -      +.-.+.+..|..-.-.+++.+.++  ..++.++++|
T Consensus        68 ~adivvitag~~~~~-~------~~r~~l~~~N~~i~~~i~~~i~~~--~p~ai~ivvt  117 (142)
T d1y6ja1          68 DCDVIVVTAGANRKP-G------ETRLDLAKKNVMIAKEVTQNIMKY--YNHGVILVVS  117 (142)
T ss_dssp             TCSEEEECCCC-------------CHHHHHHHHHHHHHHHHHHHHHH--CCSCEEEECS
T ss_pred             CCceEEEecccccCc-C------cchhHHhhHHHHHHHHHHHHhhcc--CCCceEEEec
Confidence            789999999965321 1      222344555554444444433322  1236666665

>d1tt7a2 c.2.1.1 (A:128-294) Hypothetical protein YhfP {Bacillus subtilis [TaxId: 1423]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Alcohol dehydrogenase-like, C-terminal domain
domain: Hypothetical protein YhfP
species: Bacillus subtilis [TaxId: 1423]

Probab=96.94  E-value=0.00049  Score=51.32  Aligned_cols=42  Identities=19%  Similarity=0.321  Sum_probs=35.9

Q ss_pred             CCCEEEEcCCCChHHHHHHHHHHHcCCeEEEEeCCcchHHHH
Q 044010           46 SGKVVIITGASSGIGEHLAYEYARRGACLALCARREKSLEEV   87 (248)
Q Consensus        46 ~~k~~lVtGg~~gIG~aia~~l~~~G~~V~l~~r~~~~~~~~   87 (248)
                      ++.++||+||+||+|...++.....|++|+.+.+++++.+.+
T Consensus        23 ~~~~VLV~gaaGgVG~~avQlAk~~Ga~Viat~~s~~k~~~~   64 (167)
T d1tt7a2          23 EKGSVLVTGATGGVGGIAVSMLNKRGYDVVASTGNREAADYL   64 (167)
T ss_dssp             GGCCEEEESTTSHHHHHHHHHHHHHTCCEEEEESSSSTHHHH
T ss_pred             CCCEEEEeCCcchHHHHHHHHHHHcCCceEEEecCHHHHHHH
Confidence            567899999999999998876666799999999998876654

>d2pv7a2 c.2.1.6 (A:92-243) Prephenate dehydrogenase TyrA {Haemophilus influenzae [TaxId: 727]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: 6-phosphogluconate dehydrogenase-like, N-terminal domain
domain: Prephenate dehydrogenase TyrA
species: Haemophilus influenzae [TaxId: 727]

Probab=96.94  E-value=0.002  Score=46.68  Aligned_cols=82  Identities=13%  Similarity=0.157  Sum_probs=54.2

Q ss_pred             CCCCCEEEEcCCCChHHHHHHHHHHHcCCeEEEEeCCcchHHHHHHHHHhhCCCcEEEEEccCCCHHHHHHHHHHHHhHc
Q 044010           44 DVSGKVVIITGASSGIGEHLAYEYARRGACLALCARREKSLEEVADTAREIGSPDVITIRADVSKVDDCRSLVEETMNHF  123 (248)
Q Consensus        44 ~~~~k~~lVtGg~~gIG~aia~~l~~~G~~V~l~~r~~~~~~~~~~~l~~~~~~~v~~~~~D~~~~~~~~~~~~~~~~~~  123 (248)
                      +..=|++.|.||.|.+|..+|+.|.++|++|.+.+|+.....+..   ..  ........   ....++.+.+.++....
T Consensus         6 ~~~~~kI~iIGg~G~mG~~la~~L~~~G~~V~~~d~~~~~~~~~~---~~--~~~~v~~~---~~~~~~~~v~~~~~~~~   77 (152)
T d2pv7a2           6 NSDIHKIVIVGGYGKLGGLFARYLRASGYPISILDREDWAVAESI---LA--NADVVIVS---VPINLTLETIERLKPYL   77 (152)
T ss_dssp             CTTCCCEEEETTTSHHHHHHHHHHHTTTCCEEEECTTCGGGHHHH---HT--TCSEEEEC---SCGGGHHHHHHHHGGGC
T ss_pred             CCCCCeEEEEcCCCHHHHHHHHHHHHcCCCcEecccccccccchh---hh--hccccccc---cchhhheeeeecccccc
Confidence            445568999999999999999999999999999999876544322   11  12333333   33456667777765544


Q ss_pred             CCccEEEEcc
Q 044010          124 GRLDHLVNNA  133 (248)
Q Consensus       124 g~id~vv~~a  133 (248)
                      .+=.+++..+
T Consensus        78 ~~~~iiiD~~   87 (152)
T d2pv7a2          78 TENMLLADLT   87 (152)
T ss_dssp             CTTSEEEECC
T ss_pred             cCCceEEEec
Confidence            3333444443

>d1o89a2 c.2.1.1 (A:116-292) Hypothetical protein YhdH {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Alcohol dehydrogenase-like, C-terminal domain
domain: Hypothetical protein YhdH
species: Escherichia coli [TaxId: 562]

Probab=96.93  E-value=0.00074  Score=50.78  Aligned_cols=43  Identities=23%  Similarity=0.329  Sum_probs=36.2

Q ss_pred             CCCCEEEEcCCCChHHHHHHHHHHHcCCeEEEEeCCcchHHHH
Q 044010           45 VSGKVVIITGASSGIGEHLAYEYARRGACLALCARREKSLEEV   87 (248)
Q Consensus        45 ~~~k~~lVtGg~~gIG~aia~~l~~~G~~V~l~~r~~~~~~~~   87 (248)
                      .++.++||+||+||+|...++-.-..|++|+.+++++++.+.+
T Consensus        30 ~~~~~vlV~gasGGVG~~aiQlAk~~Ga~Via~~~~~~k~~~~   72 (177)
T d1o89a2          30 PQDGEIVVTGASGGVGSTAVALLHKLGYQVVAVSGRESTHEYL   72 (177)
T ss_dssp             GGGCEEEESSTTSHHHHHHHHHHHHTTCCEEEEESCGGGHHHH
T ss_pred             CCCCcEEEEEccccchHHHHHHHHHcCCCeEEEecchhHHHHH
Confidence            3456899999999999998887777899999999998875543

>d2cmda1 c.2.1.5 (A:1-145) Malate dehydrogenase {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: LDH N-terminal domain-like
domain: Malate dehydrogenase
species: Escherichia coli [TaxId: 562]

Probab=96.92  E-value=0.014  Score=41.96  Aligned_cols=115  Identities=18%  Similarity=0.122  Sum_probs=64.5

Q ss_pred             EEEEcCCCChHHHHHHHHHHHc-C--CeEEEEeCCcchHHHHHHHHHhhCCCcEEEEEccCCCHHHHHHHHHHHHhHcCC
Q 044010           49 VVIITGASSGIGEHLAYEYARR-G--ACLALCARREKSLEEVADTAREIGSPDVITIRADVSKVDDCRSLVEETMNHFGR  125 (248)
Q Consensus        49 ~~lVtGg~~gIG~aia~~l~~~-G--~~V~l~~r~~~~~~~~~~~l~~~~~~~v~~~~~D~~~~~~~~~~~~~~~~~~g~  125 (248)
                      ++.|+|++|.+|.++|..|+.+ |  .++++.+.++ ..+.....+..............-.+.+.+           ..
T Consensus         2 KV~IiGaaG~VG~~~a~~l~~~~~~~~el~L~D~~~-~~~g~a~Dl~h~~~~~~~~~~~~~~~~~~~-----------~~   69 (145)
T d2cmda1           2 KVAVLGAAGGIGQALALLLKTQLPSGSELSLYDIAP-VTPGVAVDLSHIPTAVKIKGFSGEDATPAL-----------EG   69 (145)
T ss_dssp             EEEEETTTSHHHHHHHHHHHHHSCTTCEEEEECSST-THHHHHHHHHTSCSSCEEEEECSSCCHHHH-----------TT
T ss_pred             EEEEEcCCChHHHHHHHHHHhCCCCCcEEEEecccc-cchhHHHHHHCCccccCCcEEEcCCCcccc-----------CC
Confidence            5779999999999999988754 4  5899999864 444444445543221111122222233221           26


Q ss_pred             ccEEEEccccCCcccccccCChHHHHHHHHhhhHHHHHHHHHHhhhhhhcCCeEEEEcC
Q 044010          126 LDHLVNNAGISSVALFEDIVNITDFKQIMNINFWGSVYTTRFAVPHLRYTKGKIVVLSS  184 (248)
Q Consensus       126 id~vv~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~g~iV~isS  184 (248)
                      -|++|.++|...... .   +..   +.+..|..-.-.+.+.+.++-  .++.++++|.
T Consensus        70 aDvvvitaG~~~k~g-~---~R~---dl~~~N~~i~~~v~~~i~~~~--p~aivivvtN  119 (145)
T d2cmda1          70 ADVVLISAGVRRKPG-M---DRS---DLFNVNAGIVKNLVQQVAKTC--PKACIGIITN  119 (145)
T ss_dssp             CSEEEECCSCCCCTT-C---CGG---GGHHHHHHHHHHHHHHHHHHC--TTSEEEECSS
T ss_pred             CCEEEECCCccCCCC-c---chh---hHHHHHHHHHHHHHHHHHhhC--CCcEEEEccC
Confidence            899999999753221 1   222   334455544444444443321  2366666664

>d1pzga1 c.2.1.5 (A:14-163) Lactate dehydrogenase {Toxoplasma gondii [TaxId: 5811]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: LDH N-terminal domain-like
domain: Lactate dehydrogenase
species: Toxoplasma gondii [TaxId: 5811]

Probab=96.91  E-value=0.00073  Score=49.64  Aligned_cols=79  Identities=19%  Similarity=0.169  Sum_probs=52.1

Q ss_pred             CCCEEEEcCCCChHHHHHHHHHHHcCC-eEEEEeCCcchHHHHHHHHHhh---CCCcEEEEEccCCCHHHHHHHHHHHHh
Q 044010           46 SGKVVIITGASSGIGEHLAYEYARRGA-CLALCARREKSLEEVADTAREI---GSPDVITIRADVSKVDDCRSLVEETMN  121 (248)
Q Consensus        46 ~~k~~lVtGg~~gIG~aia~~l~~~G~-~V~l~~r~~~~~~~~~~~l~~~---~~~~v~~~~~D~~~~~~~~~~~~~~~~  121 (248)
                      +.+++.|.|+ |.+|..+|..++.+|. ++++.+.+++..+.....+...   .+........  ++.   ++.      
T Consensus         6 k~~KI~IIGa-G~VG~~lA~~l~~~~~~el~L~D~~~~~~~g~a~Dl~~~~~~~~~~~~~~~~--~~~---~~~------   73 (154)
T d1pzga1           6 RRKKVAMIGS-GMIGGTMGYLCALRELADVVLYDVVKGMPEGKALDLSHVTSVVDTNVSVRAE--YSY---EAA------   73 (154)
T ss_dssp             CCCEEEEECC-SHHHHHHHHHHHHHTCCEEEEECSSSSHHHHHHHHHHHHHHHTTCCCCEEEE--CSH---HHH------
T ss_pred             CCCcEEEECC-CHHHHHHHHHHHhCCCceEEEEEeccccchhHHHHHhhhccccCCeeEEecc--Cch---hhh------
Confidence            5667888887 9999999999988885 8999999988766665554432   1111111111  111   111      


Q ss_pred             HcCCccEEEEccccCC
Q 044010          122 HFGRLDHLVNNAGISS  137 (248)
Q Consensus       122 ~~g~id~vv~~ag~~~  137 (248)
                       ...-|++|.++|...
T Consensus        74 -~~~adiVvitag~~~   88 (154)
T d1pzga1          74 -LTGADCVIVTAGLTK   88 (154)
T ss_dssp             -HTTCSEEEECCSCSS
T ss_pred             -hcCCCeEEEeccccc
Confidence             137999999999764

>d1nvta1 c.2.1.7 (A:111-287) Shikimate 5-dehydrogenase AroE {Archaeon Methanococcus jannaschii [TaxId: 2190]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Aminoacid dehydrogenase-like, C-terminal domain
domain: Shikimate 5-dehydrogenase AroE
species: Archaeon Methanococcus jannaschii [TaxId: 2190]

Probab=96.90  E-value=0.00066  Score=50.92  Aligned_cols=79  Identities=20%  Similarity=0.309  Sum_probs=56.3

Q ss_pred             cCCCCCEEEEcCCCChHHHHHHHHHHHcCCeEEEEeCCcchHHHHHHHHHhhCCCcE-EEE-EccCCCHHHHHHHHHHHH
Q 044010           43 EDVSGKVVIITGASSGIGEHLAYEYARRGACLALCARREKSLEEVADTAREIGSPDV-ITI-RADVSKVDDCRSLVEETM  120 (248)
Q Consensus        43 ~~~~~k~~lVtGg~~gIG~aia~~l~~~G~~V~l~~r~~~~~~~~~~~l~~~~~~~v-~~~-~~D~~~~~~~~~~~~~~~  120 (248)
                      .+++||.++|.|+ ||.+++++..|.+.| +|.+..|+.++.++..+.+........ ..+ ..|+.             
T Consensus        14 ~~~~~k~vlIlGa-GG~arai~~aL~~~~-~i~I~nR~~~ka~~l~~~~~~~~~~~~~~~~~~~~~~-------------   78 (177)
T d1nvta1          14 GRVKDKNIVIYGA-GGAARAVAFELAKDN-NIIIANRTVEKAEALAKEIAEKLNKKFGEEVKFSGLD-------------   78 (177)
T ss_dssp             CCCCSCEEEEECC-SHHHHHHHHHHTSSS-EEEEECSSHHHHHHHHHHHHHHHTCCHHHHEEEECTT-------------
T ss_pred             CCcCCCEEEEECC-cHHHHHHHHHHcccc-ceeeehhhhhHHHHHHHHHHHhhchhhhhhhhhhhhh-------------
Confidence            4799999999976 789999999997767 999999999998888887765432111 001 01111             


Q ss_pred             hHcCCccEEEEccccC
Q 044010          121 NHFGRLDHLVNNAGIS  136 (248)
Q Consensus       121 ~~~g~id~vv~~ag~~  136 (248)
                      ......|++||+....
T Consensus        79 ~~~~~~dliIn~tp~g   94 (177)
T d1nvta1          79 VDLDGVDIIINATPIG   94 (177)
T ss_dssp             CCCTTCCEEEECSCTT
T ss_pred             hccchhhhhccCCccc
Confidence            1124689999998754

>d1d1ta2 c.2.1.1 (A:163-338) Alcohol dehydrogenase {Human (Homo sapiens), different isozymes [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Alcohol dehydrogenase-like, C-terminal domain
domain: Alcohol dehydrogenase
species: Human (Homo sapiens), different isozymes [TaxId: 9606]

Probab=96.88  E-value=0.0015  Score=48.88  Aligned_cols=79  Identities=13%  Similarity=0.193  Sum_probs=53.2

Q ss_pred             CCCEEEEcCCCChHHHHHHHHHHHcCC-eEEEEeCCcchHHHHHHHHHhhCCCcEEEEEccCCCHHH-HHHHHHHHHhHc
Q 044010           46 SGKVVIITGASSGIGEHLAYEYARRGA-CLALCARREKSLEEVADTAREIGSPDVITIRADVSKVDD-CRSLVEETMNHF  123 (248)
Q Consensus        46 ~~k~~lVtGg~~gIG~aia~~l~~~G~-~V~l~~r~~~~~~~~~~~l~~~~~~~v~~~~~D~~~~~~-~~~~~~~~~~~~  123 (248)
                      +|.+++|.|+ ||+|...+..+...|+ +|+++++++++++-+.+ +   +...    ..|.++.+. .+...+..  ..
T Consensus        29 ~g~tVlI~G~-GgvGl~ai~~ak~~G~~~Vi~vd~~~~kl~~Ak~-~---GA~~----~in~~~~~~~~~~~~~~~--~g   97 (176)
T d1d1ta2          29 PGSTCVVFGL-GGVGLSVIMGCKSAGASRIIGIDLNKDKFEKAMA-V---GATE----CISPKDSTKPISEVLSEM--TG   97 (176)
T ss_dssp             TTCEEEEECC-SHHHHHHHHHHHHTTCSEEEEECSCGGGHHHHHH-H---TCSE----EECGGGCSSCHHHHHHHH--HT
T ss_pred             CCCEEEEECC-CchhHHHHHHHHHcCCceEEEecCcHHHHHHHHh-c---CCcE----EECccccchHHHHHHHHh--cc
Confidence            5889999976 9999999999999996 89999999988775433 2   3211    223333322 22222221  22


Q ss_pred             CCccEEEEcccc
Q 044010          124 GRLDHLVNNAGI  135 (248)
Q Consensus       124 g~id~vv~~ag~  135 (248)
                      +.+|++|.+.|.
T Consensus        98 ~G~d~vi~~~g~  109 (176)
T d1d1ta2          98 NNVGYTFEVIGH  109 (176)
T ss_dssp             SCCCEEEECSCC
T ss_pred             ccceEEEEeCCc
Confidence            479999999874

>d1uufa2 c.2.1.1 (A:145-312) Hypothetical protein YahK {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Alcohol dehydrogenase-like, C-terminal domain
domain: Hypothetical protein YahK
species: Escherichia coli [TaxId: 562]

Probab=96.88  E-value=0.0023  Score=47.26  Aligned_cols=75  Identities=21%  Similarity=0.292  Sum_probs=52.3

Q ss_pred             CCCCEEEEcCCCChHHHHHHHHHHHcCCeEEEEeCCcchHHHHHHHHHhhCCCcEEEEEccCCCHHHHHHHHHHHHhHcC
Q 044010           45 VSGKVVIITGASSGIGEHLAYEYARRGACLALCARREKSLEEVADTAREIGSPDVITIRADVSKVDDCRSLVEETMNHFG  124 (248)
Q Consensus        45 ~~~k~~lVtGg~~gIG~aia~~l~~~G~~V~l~~r~~~~~~~~~~~l~~~~~~~v~~~~~D~~~~~~~~~~~~~~~~~~g  124 (248)
                      -.|.+++|.|+ |++|...++.+-..|++++++++++++.+.    .++.+.+    ..+|..+.+...       ...+
T Consensus        29 ~~G~~VlI~Ga-G~vG~~a~qlak~~Ga~~i~~~~~~~~~~~----a~~lGad----~~i~~~~~~~~~-------~~~~   92 (168)
T d1uufa2          29 GPGKKVGVVGI-GGLGHMGIKLAHAMGAHVVAFTTSEAKREA----AKALGAD----EVVNSRNADEMA-------AHLK   92 (168)
T ss_dssp             CTTCEEEEECC-SHHHHHHHHHHHHTTCEEEEEESSGGGHHH----HHHHTCS----EEEETTCHHHHH-------TTTT
T ss_pred             CCCCEEEEecc-chHHHHHHHHhhcccccchhhccchhHHHH----HhccCCc----EEEECchhhHHH-------HhcC
Confidence            36889999986 899999887777789999999998876543    2333432    224665554322       2234


Q ss_pred             CccEEEEcccc
Q 044010          125 RLDHLVNNAGI  135 (248)
Q Consensus       125 ~id~vv~~ag~  135 (248)
                      .+|+++.++|.
T Consensus        93 ~~D~vid~~g~  103 (168)
T d1uufa2          93 SFDFILNTVAA  103 (168)
T ss_dssp             CEEEEEECCSS
T ss_pred             CCceeeeeeec
Confidence            79999999875

>d2jfga1 c.5.1.1 (A:1-93) UDP-N-acetylmuramoyl-L-alanine:D-glutamate ligase MurD {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: MurCD N-terminal domain
superfamily: MurCD N-terminal domain
family: MurCD N-terminal domain
domain: UDP-N-acetylmuramoyl-L-alanine:D-glutamate ligase MurD
species: Escherichia coli [TaxId: 562]

Probab=96.87  E-value=0.00058  Score=45.61  Aligned_cols=38  Identities=26%  Similarity=0.283  Sum_probs=34.3

Q ss_pred             CCCCCEEEEcCCCChHHHHHHHHHHHcCCeEEEEeCCcc
Q 044010           44 DVSGKVVIITGASSGIGEHLAYEYARRGACLALCARREK   82 (248)
Q Consensus        44 ~~~~k~~lVtGg~~gIG~aia~~l~~~G~~V~l~~r~~~   82 (248)
                      +++||+++|.|. |.-|+++|+.|.++|++|.+.+.+..
T Consensus         2 ~~~~K~v~ViGl-G~sG~s~a~~L~~~g~~v~~~D~~~~   39 (93)
T d2jfga1           2 DYQGKNVVIIGL-GLTGLSCVDFFLARGVTPRVMDTRMT   39 (93)
T ss_dssp             CCTTCCEEEECC-SHHHHHHHHHHHHTTCCCEEEESSSS
T ss_pred             CcCCCEEEEEeE-CHHHHHHHHHHHHCCCEEEEeeCCcC
Confidence            689999999988 77899999999999999999998654

>d2fzwa2 c.2.1.1 (A:163-338) Alcohol dehydrogenase {Human (Homo sapiens), different isozymes [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Alcohol dehydrogenase-like, C-terminal domain
domain: Alcohol dehydrogenase
species: Human (Homo sapiens), different isozymes [TaxId: 9606]

Probab=96.82  E-value=0.0017  Score=48.11  Aligned_cols=79  Identities=18%  Similarity=0.238  Sum_probs=50.4

Q ss_pred             CCCEEEEcCCCChHHHHHHHHHHHcCC-eEEEEeCCcchHHHHHHHHHhhCCCcEEEEEccCCC-HHHHHHHHHHHHhHc
Q 044010           46 SGKVVIITGASSGIGEHLAYEYARRGA-CLALCARREKSLEEVADTAREIGSPDVITIRADVSK-VDDCRSLVEETMNHF  123 (248)
Q Consensus        46 ~~k~~lVtGg~~gIG~aia~~l~~~G~-~V~l~~r~~~~~~~~~~~l~~~~~~~v~~~~~D~~~-~~~~~~~~~~~~~~~  123 (248)
                      +|.+++|.|+ +|+|...++.+...|+ +|+.+++++++.+. .+++   +...  ++  |..+ .+.+.+.+++.  ..
T Consensus        28 ~G~tVlI~Ga-GGvG~~aiq~ak~~G~~~vi~~~~~~~k~~~-ak~l---Ga~~--~i--~~~~~~~~~~~~~~~~--~~   96 (176)
T d2fzwa2          28 PGSVCAVFGL-GGVGLAVIMGCKVAGASRIIGVDINKDKFAR-AKEF---GATE--CI--NPQDFSKPIQEVLIEM--TD   96 (176)
T ss_dssp             TTCEEEEECC-SHHHHHHHHHHHHHTCSEEEEECSCGGGHHH-HHHH---TCSE--EE--CGGGCSSCHHHHHHHH--TT
T ss_pred             CCCEEEEecc-hhHHHHHHHHHHHHhcCceEEEcccHHHHHH-HHHh---CCcE--EE--eCCchhhHHHHHHHHH--cC
Confidence            5889999987 5999999888888897 67777777766443 3333   3222  22  3322 23344444432  23


Q ss_pred             CCccEEEEcccc
Q 044010          124 GRLDHLVNNAGI  135 (248)
Q Consensus       124 g~id~vv~~ag~  135 (248)
                      +.+|+++.++|.
T Consensus        97 ~g~D~vid~~G~  108 (176)
T d2fzwa2          97 GGVDYSFECIGN  108 (176)
T ss_dssp             SCBSEEEECSCC
T ss_pred             CCCcEeeecCCC
Confidence            479999999874

>d2f1ka2 c.2.1.6 (A:1-165) Prephenate dehydrogenase TyrA {Synechocystis sp. pcc 6803 [TaxId: 1148]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: 6-phosphogluconate dehydrogenase-like, N-terminal domain
domain: Prephenate dehydrogenase TyrA
species: Synechocystis sp. pcc 6803 [TaxId: 1148]

Probab=96.81  E-value=0.0045  Score=45.33  Aligned_cols=81  Identities=19%  Similarity=0.267  Sum_probs=53.5

Q ss_pred             EEEcCCCChHHHHHHHHHHHcCCeEEEEeCCcchHHHHHHHH---------HhhCCCcEEEEEccCCCHHHHHHHHHHHH
Q 044010           50 VIITGASSGIGEHLAYEYARRGACLALCARREKSLEEVADTA---------REIGSPDVITIRADVSKVDDCRSLVEETM  120 (248)
Q Consensus        50 ~lVtGg~~gIG~aia~~l~~~G~~V~l~~r~~~~~~~~~~~l---------~~~~~~~v~~~~~D~~~~~~~~~~~~~~~  120 (248)
                      +.|.| .|-+|.++|+.|.++|++|...+|+++..++..+.-         +.....++.++.+   ..++++++++++.
T Consensus         3 I~iIG-~G~mG~~lA~~l~~~g~~V~~~d~~~~~~~~a~~~~~~~~~~~~~~~~~~~DiIilav---p~~~~~~vl~~l~   78 (165)
T d2f1ka2           3 IGVVG-LGLIGASLAGDLRRRGHYLIGVSRQQSTCEKAVERQLVDEAGQDLSLLQTAKIIFLCT---PIQLILPTLEKLI   78 (165)
T ss_dssp             EEEEC-CSHHHHHHHHHHHHTTCEEEEECSCHHHHHHHHHTTSCSEEESCGGGGTTCSEEEECS---CHHHHHHHHHHHG
T ss_pred             EEEEe-ecHHHHHHHHHHHHCCCEEEEEECCchHHHHHHHhhccceeeeecccccccccccccC---cHhhhhhhhhhhh
Confidence            45554 599999999999999999999999987666544321         1111223444333   3567888888887


Q ss_pred             hHcCCccEEEEccc
Q 044010          121 NHFGRLDHLVNNAG  134 (248)
Q Consensus       121 ~~~g~id~vv~~ag  134 (248)
                      +...+=.++++.++
T Consensus        79 ~~l~~~~iv~~~~s   92 (165)
T d2f1ka2          79 PHLSPTAIVTDVAS   92 (165)
T ss_dssp             GGSCTTCEEEECCS
T ss_pred             hhcccccceeeccc
Confidence            66555556655543

>d1pjqa1 c.2.1.11 (A:1-113) Siroheme synthase CysG, domain 1 {Salmonella typhimurium [TaxId: 90371]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Siroheme synthase N-terminal domain-like
domain: Siroheme synthase CysG, domain 1
species: Salmonella typhimurium [TaxId: 90371]

Probab=96.78  E-value=0.0027  Score=43.70  Aligned_cols=59  Identities=15%  Similarity=0.101  Sum_probs=43.0

Q ss_pred             cCCCCCEEEEcCCCChHHHHHHHHHHHcCCeEEEEeCCcchHHHHHHHHHhhCCCcEEEEEccCC
Q 044010           43 EDVSGKVVIITGASSGIGEHLAYEYARRGACLALCARREKSLEEVADTAREIGSPDVITIRADVS  107 (248)
Q Consensus        43 ~~~~~k~~lVtGg~~gIG~aia~~l~~~G~~V~l~~r~~~~~~~~~~~l~~~~~~~v~~~~~D~~  107 (248)
                      .+++||+++|.|| |.+|.+-++.|++.|++|.+.+....+  +..+.. +.  .++.+..-++.
T Consensus         8 l~l~~k~vlVvG~-G~va~~ka~~ll~~ga~v~v~~~~~~~--~~~~~~-~~--~~i~~~~~~~~   66 (113)
T d1pjqa1           8 CQLRDRDCLIVGG-GDVAERKARLLLEAGARLTVNALTFIP--QFTVWA-NE--GMLTLVEGPFD   66 (113)
T ss_dssp             ECCBTCEEEEECC-SHHHHHHHHHHHHTTBEEEEEESSCCH--HHHHHH-TT--TSCEEEESSCC
T ss_pred             EEeCCCEEEEECC-CHHHHHHHHHHHHCCCeEEEEeccCCh--HHHHHH-hc--CCceeeccCCC
Confidence            4899999999988 679999999999999999999876543  222222 22  24556655554

>d1p0fa2 c.2.1.1 (A:1164-1337) Alcohol dehydrogenase {Frog (Rana perezi) [TaxId: 8403]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Alcohol dehydrogenase-like, C-terminal domain
domain: Alcohol dehydrogenase
species: Frog (Rana perezi) [TaxId: 8403]

Probab=96.77  E-value=0.0012  Score=49.22  Aligned_cols=81  Identities=19%  Similarity=0.261  Sum_probs=53.8

Q ss_pred             CCCCCEEEEcCCCChHHHHHHHHHHHcCC-eEEEEeCCcchHHHHHHHHHhhCCCcEEEEEccCCCHHH-HHHHHHHHHh
Q 044010           44 DVSGKVVIITGASSGIGEHLAYEYARRGA-CLALCARREKSLEEVADTAREIGSPDVITIRADVSKVDD-CRSLVEETMN  121 (248)
Q Consensus        44 ~~~~k~~lVtGg~~gIG~aia~~l~~~G~-~V~l~~r~~~~~~~~~~~l~~~~~~~v~~~~~D~~~~~~-~~~~~~~~~~  121 (248)
                      --+|.+++|.|+ ||+|...+..+...|+ +|+++++++++++.+.    +.+...  +  .|.++.+. +++..+..  
T Consensus        25 ~~~G~~VlV~Ga-GgvGl~a~~~ak~~G~~~Vi~~d~~~~kl~~a~----~lGa~~--~--i~~~~~d~~~~~~~~~~--   93 (174)
T d1p0fa2          25 VTPGSTCAVFGL-GGVGFSAIVGCKAAGASRIIGVGTHKDKFPKAI----ELGATE--C--LNPKDYDKPIYEVICEK--   93 (174)
T ss_dssp             CCTTCEEEEECC-SHHHHHHHHHHHHHTCSEEEEECSCGGGHHHHH----HTTCSE--E--ECGGGCSSCHHHHHHHH--
T ss_pred             CCCCCEEEEECC-CchhHHHHHHHHHcCCceeeccCChHHHHHHHH----HcCCcE--E--EcCCCchhHHHHHHHHh--
Confidence            346889999985 8999999999988997 7999999988776543    233221  2  34333222 23333221  


Q ss_pred             HcCCccEEEEcccc
Q 044010          122 HFGRLDHLVNNAGI  135 (248)
Q Consensus       122 ~~g~id~vv~~ag~  135 (248)
                      ..+.+|++|-++|.
T Consensus        94 ~~~G~d~vid~~g~  107 (174)
T d1p0fa2          94 TNGGVDYAVECAGR  107 (174)
T ss_dssp             TTSCBSEEEECSCC
T ss_pred             cCCCCcEEEEcCCC
Confidence            23479999998874

>d1bg6a2 c.2.1.6 (A:4-187) N-(1-D-carboxylethyl)-L-norvaline dehydrogenase {Arthrobacter, strain 1c [TaxId: 1663]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: 6-phosphogluconate dehydrogenase-like, N-terminal domain
domain: N-(1-D-carboxylethyl)-L-norvaline dehydrogenase
species: Arthrobacter, strain 1c [TaxId: 1663]

Probab=96.76  E-value=0.0095  Score=43.95  Aligned_cols=41  Identities=17%  Similarity=0.225  Sum_probs=35.6

Q ss_pred             CCEEEEcCCCChHHHHHHHHHHHcCCeEEEEeCCcchHHHHH
Q 044010           47 GKVVIITGASSGIGEHLAYEYARRGACLALCARREKSLEEVA   88 (248)
Q Consensus        47 ~k~~lVtGg~~gIG~aia~~l~~~G~~V~l~~r~~~~~~~~~   88 (248)
                      +|++.|.|+ |.+|.++|..|+++|++|.+.+|++++.+...
T Consensus         1 sk~iaIiGa-G~~G~~~A~~l~~~G~~V~~~~r~~~~~~~~~   41 (184)
T d1bg6a2           1 SKTYAVLGL-GNGGHAFAAYLALKGQSVLAWDIDAQRIKEIQ   41 (184)
T ss_dssp             CCEEEEECC-SHHHHHHHHHHHHTTCEEEEECSCHHHHHHHH
T ss_pred             CCEEEEECc-cHHHHHHHHHHHHCCCEEEEEECCHHHHHHHH
Confidence            478888988 99999999999999999999999987665544

>d1f8fa2 c.2.1.1 (A:163-336) Benzyl alcohol dehydrogenase {Acinetobacter calcoaceticus [TaxId: 471]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Alcohol dehydrogenase-like, C-terminal domain
domain: Benzyl alcohol dehydrogenase
species: Acinetobacter calcoaceticus [TaxId: 471]

Probab=96.75  E-value=0.0018  Score=48.16  Aligned_cols=78  Identities=17%  Similarity=0.231  Sum_probs=50.2

Q ss_pred             CCCEEEEcCCCChHHHHHHHHHHHcCCe-EEEEeCCcchHHHHHHHHHhhCCCcEEEEEccCCCHHHHHHHHHHHHhHcC
Q 044010           46 SGKVVIITGASSGIGEHLAYEYARRGAC-LALCARREKSLEEVADTAREIGSPDVITIRADVSKVDDCRSLVEETMNHFG  124 (248)
Q Consensus        46 ~~k~~lVtGg~~gIG~aia~~l~~~G~~-V~l~~r~~~~~~~~~~~l~~~~~~~v~~~~~D~~~~~~~~~~~~~~~~~~g  124 (248)
                      +|.+++|.|+ |++|...+..+...|++ |+++++++++.+.+    ++.+...  +  .|.++.+ ..+.+.++.  .+
T Consensus        28 ~g~~VlI~G~-G~iG~~~~~~ak~~g~~~v~~~~~~~~k~~~a----~~~Ga~~--~--i~~~~~~-~~~~i~~~t--~g   95 (174)
T d1f8fa2          28 PASSFVTWGA-GAVGLSALLAAKVCGASIIIAVDIVESRLELA----KQLGATH--V--INSKTQD-PVAAIKEIT--DG   95 (174)
T ss_dssp             TTCEEEEESC-SHHHHHHHHHHHHHTCSEEEEEESCHHHHHHH----HHHTCSE--E--EETTTSC-HHHHHHHHT--TS
T ss_pred             CCCEEEEeCC-CHHHhhhhhcccccccceeeeeccHHHHHHHH----HHcCCeE--E--EeCCCcC-HHHHHHHHc--CC
Confidence            5889999987 89999999888788985 55667766554433    3334222  2  3555533 333333331  25


Q ss_pred             CccEEEEcccc
Q 044010          125 RLDHLVNNAGI  135 (248)
Q Consensus       125 ~id~vv~~ag~  135 (248)
                      .+|++|.++|.
T Consensus        96 g~D~vid~~G~  106 (174)
T d1f8fa2          96 GVNFALESTGS  106 (174)
T ss_dssp             CEEEEEECSCC
T ss_pred             CCcEEEEcCCc
Confidence            79999999874

>d1llua2 c.2.1.1 (A:144-309) Alcohol dehydrogenase {Pseudomonas aeruginosa [TaxId: 287]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Alcohol dehydrogenase-like, C-terminal domain
domain: Alcohol dehydrogenase
species: Pseudomonas aeruginosa [TaxId: 287]

Probab=96.71  E-value=0.0026  Score=46.71  Aligned_cols=76  Identities=20%  Similarity=0.272  Sum_probs=48.9

Q ss_pred             CCCEEEEcCCCChHHHHHHHHHHHcCCeEEEEeCCcchHHHHHHHHHhhCCCcEEEEEccCCCHHHHHHHHHHHHhHcCC
Q 044010           46 SGKVVIITGASSGIGEHLAYEYARRGACLALCARREKSLEEVADTAREIGSPDVITIRADVSKVDDCRSLVEETMNHFGR  125 (248)
Q Consensus        46 ~~k~~lVtGg~~gIG~aia~~l~~~G~~V~l~~r~~~~~~~~~~~l~~~~~~~v~~~~~D~~~~~~~~~~~~~~~~~~g~  125 (248)
                      +|.+++|.|+ |++|...+..+...|++|+.+++++++.+.+    ++.+...    ..|.++.+..+++.    +..+.
T Consensus        27 ~g~~VlV~Ga-G~vG~~~~~~ak~~G~~Vi~~~~~~~~~~~a----~~~Ga~~----~i~~~~~~~~~~~~----~~~~g   93 (166)
T d1llua2          27 PGQWVAISGI-GGLGHVAVQYARAMGLHVAAIDIDDAKLELA----RKLGASL----TVNARQEDPVEAIQ----RDIGG   93 (166)
T ss_dssp             TTCEEEEECC-SHHHHHHHHHHHHTTCEEEEEESCHHHHHHH----HHTTCSE----EEETTTSCHHHHHH----HHHSS
T ss_pred             CCCEEEEeec-cccHHHHHHHHHHcCCccceecchhhHHHhh----hccCccc----cccccchhHHHHHH----HhhcC
Confidence            5789999876 9999998887777899999999988765543    3334321    23555554443332    33344


Q ss_pred             ccEEEEccc
Q 044010          126 LDHLVNNAG  134 (248)
Q Consensus       126 id~vv~~ag  134 (248)
                      .+.+|-+++
T Consensus        94 ~~~~i~~~~  102 (166)
T d1llua2          94 AHGVLVTAV  102 (166)
T ss_dssp             EEEEEECCS
T ss_pred             Ccccccccc
Confidence            555555543

>d1llda1 c.2.1.5 (A:7-149) Lactate dehydrogenase {Bifidobacterium longum, strain am101-2 [TaxId: 216816]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: LDH N-terminal domain-like
domain: Lactate dehydrogenase
species: Bifidobacterium longum, strain am101-2 [TaxId: 216816]

Probab=96.69  E-value=0.025  Score=40.52  Aligned_cols=74  Identities=20%  Similarity=0.200  Sum_probs=49.0

Q ss_pred             EEEEcCCCChHHHHHHHHHHHcCC--eEEEEeCCcchHHHHHHHHHhh---CCCcEEEEEccCCCHHHHHHHHHHHHhHc
Q 044010           49 VVIITGASSGIGEHLAYEYARRGA--CLALCARREKSLEEVADTAREI---GSPDVITIRADVSKVDDCRSLVEETMNHF  123 (248)
Q Consensus        49 ~~lVtGg~~gIG~aia~~l~~~G~--~V~l~~r~~~~~~~~~~~l~~~---~~~~v~~~~~D~~~~~~~~~~~~~~~~~~  123 (248)
                      ++.|.|+ |.+|.++|..++.+|.  ++++.++++++++.....++..   .+ .......  .+.+           ..
T Consensus         3 Ki~IIGa-G~VG~~~a~~l~~~~l~~ElvL~D~~~~~~~g~a~Dl~~a~~~~~-~~~i~~~--~~~~-----------~~   67 (143)
T d1llda1           3 KLAVIGA-GAVGSTLAFAAAQRGIAREIVLEDIAKERVEAEVLDMQHGSSFYP-TVSIDGS--DDPE-----------IC   67 (143)
T ss_dssp             EEEEECC-SHHHHHHHHHHHHTTCCSEEEEECSSHHHHHHHHHHHHHTGGGST-TCEEEEE--SCGG-----------GG
T ss_pred             EEEEECC-CHHHHHHHHHHHhcCCCcEEEEEEeccccchhHHHHHHhccccCC-CceeecC--CCHH-----------Hh
Confidence            3555686 9999999999999986  8999999987766554445432   12 2222211  1222           12


Q ss_pred             CCccEEEEccccCC
Q 044010          124 GRLDHLVNNAGISS  137 (248)
Q Consensus       124 g~id~vv~~ag~~~  137 (248)
                      .+-|++|.+||...
T Consensus        68 ~daDvVVitaG~~~   81 (143)
T d1llda1          68 RDADMVVITAGPRQ   81 (143)
T ss_dssp             TTCSEEEECCCCCC
T ss_pred             hCCcEEEEeccccc
Confidence            36899999999753

>d1a5za1 c.2.1.5 (A:22-163) Lactate dehydrogenase {Thermotoga maritima [TaxId: 2336]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: LDH N-terminal domain-like
domain: Lactate dehydrogenase
species: Thermotoga maritima [TaxId: 2336]

Probab=96.65  E-value=0.015  Score=41.54  Aligned_cols=109  Identities=15%  Similarity=0.111  Sum_probs=64.9

Q ss_pred             EEEEcCCCChHHHHHHHHHHHcCC--eEEEEeCCcchHHHHHHHHHhhC--CCcEEEEEccCCCHHHHHHHHHHHHhHcC
Q 044010           49 VVIITGASSGIGEHLAYEYARRGA--CLALCARREKSLEEVADTAREIG--SPDVITIRADVSKVDDCRSLVEETMNHFG  124 (248)
Q Consensus        49 ~~lVtGg~~gIG~aia~~l~~~G~--~V~l~~r~~~~~~~~~~~l~~~~--~~~v~~~~~D~~~~~~~~~~~~~~~~~~g  124 (248)
                      ++.|.|+ |.+|.+++..++.+|.  ++++.++++++++.....+....  ..+......|   .+           +..
T Consensus         2 KI~IIGa-G~VG~~~a~~l~~~~l~~el~L~Di~~~~~~g~~~Dl~~~~~~~~~~~~~~~~---~~-----------~~~   66 (140)
T d1a5za1           2 KIGIVGL-GRVGSSTAFALLMKGFAREMVLIDVDKKRAEGDALDLIHGTPFTRRANIYAGD---YA-----------DLK   66 (140)
T ss_dssp             EEEEECC-SHHHHHHHHHHHHHTCCSEEEEECSSHHHHHHHHHHHHHHGGGSCCCEEEECC---GG-----------GGT
T ss_pred             EEEEECc-CHHHHHHHHHHHhCCCCCEEEEEecccccccchhccccccccccccccccCCc---HH-----------Hhc
Confidence            3556686 8999999999998874  89999999887765555544321  1233333333   22           224


Q ss_pred             CccEEEEccccCCcccccccCChHHHHHHHHhhhHHHHHHHHHHhhhhhhc--CCeEEEEc
Q 044010          125 RLDHLVNNAGISSVALFEDIVNITDFKQIMNINFWGSVYTTRFAVPHLRYT--KGKIVVLS  183 (248)
Q Consensus       125 ~id~vv~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~--~g~iV~is  183 (248)
                      +-|++|.+||......    .+.   .+.+..|..    +++.+.+.+.+.  ++.++++|
T Consensus        67 ~adivvitag~~~~~g----~~r---~dl~~~N~~----I~~~i~~~i~~~~p~aivivvt  116 (140)
T d1a5za1          67 GSDVVIVAAGVPQKPG----ETR---LQLLGRNAR----VMKEIARNVSKYAPDSIVIVVT  116 (140)
T ss_dssp             TCSEEEECCCCCCCSS----CCH---HHHHHHHHH----HHHHHHHHHHHHCTTCEEEECS
T ss_pred             CCCEEEEecccccCCC----cch---hhhhccccc----hHHHHHHHHHhcCCCcEEEEeC
Confidence            7899999999754321    122   233344433    445555554432  35566555

>d1guza1 c.2.1.5 (A:1-142) Malate dehydrogenase {Chlorobium vibrioforme [TaxId: 1098]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: LDH N-terminal domain-like
domain: Malate dehydrogenase
species: Chlorobium vibrioforme [TaxId: 1098]

Probab=96.54  E-value=0.04  Score=39.17  Aligned_cols=112  Identities=20%  Similarity=0.143  Sum_probs=64.6

Q ss_pred             EEEEcCCCChHHHHHHHHHHHcCC--eEEEEeCCcchHHHHHHHHHhh---CCCcEEEEEccCCCHHHHHHHHHHHHhHc
Q 044010           49 VVIITGASSGIGEHLAYEYARRGA--CLALCARREKSLEEVADTAREI---GSPDVITIRADVSKVDDCRSLVEETMNHF  123 (248)
Q Consensus        49 ~~lVtGg~~gIG~aia~~l~~~G~--~V~l~~r~~~~~~~~~~~l~~~---~~~~v~~~~~D~~~~~~~~~~~~~~~~~~  123 (248)
                      ++.|+|+ |.+|.+++..|+.+|.  ++++.++++++.+.....+...   ......+...  .+.+.           +
T Consensus         2 KI~IIGa-G~VG~~la~~l~~~~l~~el~L~Di~~~~~~~~~~d~~~~~~~~~~~~~i~~~--~~~~~-----------~   67 (142)
T d1guza1           2 KITVIGA-GNVGATTAFRLAEKQLARELVLLDVVEGIPQGKALDMYESGPVGLFDTKVTGS--NDYAD-----------T   67 (142)
T ss_dssp             EEEEECC-SHHHHHHHHHHHHTTCCSEEEEECSSSSHHHHHHHHHHTTHHHHTCCCEEEEE--SCGGG-----------G
T ss_pred             EEEEECc-CHHHHHHHHHHHhCCCCceEEEeccccccchhhhhhhhcccchhcccceEEec--CCHHH-----------h
Confidence            3566785 9999999999999874  8999999998766554443321   1223333322  22322           2


Q ss_pred             CCccEEEEccccCCcccccccCChHHHHHHHHhhhHHHHHHHHHHhhhhhhcCCeEEEEc
Q 044010          124 GRLDHLVNNAGISSVALFEDIVNITDFKQIMNINFWGSVYTTRFAVPHLRYTKGKIVVLS  183 (248)
Q Consensus       124 g~id~vv~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~g~iV~is  183 (248)
                      .+.|++|.++|......    .+   -.+.+..|..-...+.+.+.++  ..++.++++|
T Consensus        68 ~dadvvvitag~~~~~g----~~---r~~l~~~N~~i~~~i~~~i~~~--~p~aivivvt  118 (142)
T d1guza1          68 ANSDIVIITAGLPRKPG----MT---REDLLMKNAGIVKEVTDNIMKH--SKNPIIIVVS  118 (142)
T ss_dssp             TTCSEEEECCSCCCCTT----CC---HHHHHHHHHHHHHHHHHHHHHH--CSSCEEEECC
T ss_pred             cCCeEEEEEEecCCCCC----Cc---hHHHHHHHHHHHHHHHHHhhcc--CCCeEEEEec
Confidence            47899999999754221    12   1233444544443444443322  1235666655

>d1piwa2 c.2.1.1 (A:153-320) Cinnamyl alcohol dehydrogenase, ADH6 {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Alcohol dehydrogenase-like, C-terminal domain
domain: Cinnamyl alcohol dehydrogenase, ADH6
species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]

Probab=96.53  E-value=0.0024  Score=47.17  Aligned_cols=77  Identities=25%  Similarity=0.253  Sum_probs=50.9

Q ss_pred             CCCEEEEcCCCChHHHHHHHHHHHcCCeEEEEeCCcchHHHHHHHHHhhCCCcEEEEEccCCCHHHHHHHHHHHHhHcCC
Q 044010           46 SGKVVIITGASSGIGEHLAYEYARRGACLALCARREKSLEEVADTAREIGSPDVITIRADVSKVDDCRSLVEETMNHFGR  125 (248)
Q Consensus        46 ~~k~~lVtGg~~gIG~aia~~l~~~G~~V~l~~r~~~~~~~~~~~l~~~~~~~v~~~~~D~~~~~~~~~~~~~~~~~~g~  125 (248)
                      +|.+++|.|+ |++|...++.+...|++|+++++++++.+.+    ++.+-+.  ++  |..+....   .   .+..+.
T Consensus        27 ~g~~vlI~Ga-G~vG~~a~q~ak~~G~~vi~~~~~~~k~~~a----~~lGa~~--~i--~~~~~~~~---~---~~~~~~   91 (168)
T d1piwa2          27 PGKKVGIVGL-GGIGSMGTLISKAMGAETYVISRSSRKREDA----MKMGADH--YI--ATLEEGDW---G---EKYFDT   91 (168)
T ss_dssp             TTCEEEEECC-SHHHHHHHHHHHHHTCEEEEEESSSTTHHHH----HHHTCSE--EE--EGGGTSCH---H---HHSCSC
T ss_pred             CCCEEEEECC-CCcchhHHHHhhhccccccccccchhHHHHh----hccCCcE--Ee--eccchHHH---H---Hhhhcc
Confidence            6889999986 8999998877667899999999998876643    3334322  22  22222111   1   122357


Q ss_pred             ccEEEEccccCC
Q 044010          126 LDHLVNNAGISS  137 (248)
Q Consensus       126 id~vv~~ag~~~  137 (248)
                      +|.++.+++...
T Consensus        92 ~d~vi~~~~~~~  103 (168)
T d1piwa2          92 FDLIVVCASSLT  103 (168)
T ss_dssp             EEEEEECCSCST
T ss_pred             cceEEEEecCCc
Confidence            999999877543

>d1cdoa2 c.2.1.1 (A:165-339) Alcohol dehydrogenase {Cod (Gadus callarias) [TaxId: 8053]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Alcohol dehydrogenase-like, C-terminal domain
domain: Alcohol dehydrogenase
species: Cod (Gadus callarias) [TaxId: 8053]

Probab=96.50  E-value=0.0033  Score=46.49  Aligned_cols=79  Identities=14%  Similarity=0.228  Sum_probs=51.5

Q ss_pred             CCCEEEEcCCCChHHHHHHHHHHHcCC-eEEEEeCCcchHHHHHHHHHhhCCCcEEEEEccCCCHHH-HHHHHHHHHhHc
Q 044010           46 SGKVVIITGASSGIGEHLAYEYARRGA-CLALCARREKSLEEVADTAREIGSPDVITIRADVSKVDD-CRSLVEETMNHF  123 (248)
Q Consensus        46 ~~k~~lVtGg~~gIG~aia~~l~~~G~-~V~l~~r~~~~~~~~~~~l~~~~~~~v~~~~~D~~~~~~-~~~~~~~~~~~~  123 (248)
                      +|.+++|.|+ +|+|...+..+...|. +|+.+++++++++.+.    +.+-+.    ..|.++.+. .++..+..  ..
T Consensus        28 ~g~~VlI~G~-Gg~g~~~~~~~~~~g~~~Vi~~~~~~~rl~~a~----~~GAd~----~in~~~~~~~~~~~~~~~--~~   96 (175)
T d1cdoa2          28 PGSTCAVFGL-GAVGLAAVMGCHSAGAKRIIAVDLNPDKFEKAK----VFGATD----FVNPNDHSEPISQVLSKM--TN   96 (175)
T ss_dssp             TTCEEEEECC-SHHHHHHHHHHHHTTCSEEEEECSCGGGHHHHH----HTTCCE----EECGGGCSSCHHHHHHHH--HT
T ss_pred             CCCEEEEEec-CCccchHHHHHHHHhhchheeecchHHHHHHHH----HcCCcE----EEcCCCcchhHHHHHHhh--cc
Confidence            6789999975 7888888888888877 7888999888765433    333222    224433322 22333222  22


Q ss_pred             CCccEEEEcccc
Q 044010          124 GRLDHLVNNAGI  135 (248)
Q Consensus       124 g~id~vv~~ag~  135 (248)
                      +.+|+++.++|.
T Consensus        97 ~G~d~vid~~G~  108 (175)
T d1cdoa2          97 GGVDFSLECVGN  108 (175)
T ss_dssp             SCBSEEEECSCC
T ss_pred             CCcceeeeecCC
Confidence            479999999884

>d1kyqa1 c.2.1.11 (A:1-150) Bifunctional dehydrogenase/ferrochelatase Met8p, N-terminal domain {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Siroheme synthase N-terminal domain-like
domain: Bifunctional dehydrogenase/ferrochelatase Met8p, N-terminal domain
species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]

Probab=96.48  E-value=0.0026  Score=46.09  Aligned_cols=37  Identities=19%  Similarity=0.384  Sum_probs=33.7

Q ss_pred             cCCCCCEEEEcCCCChHHHHHHHHHHHcCCeEEEEeCC
Q 044010           43 EDVSGKVVIITGASSGIGEHLAYEYARRGACLALCARR   80 (248)
Q Consensus        43 ~~~~~k~~lVtGg~~gIG~aia~~l~~~G~~V~l~~r~   80 (248)
                      .+++||++||.|| |.+|..-++.|++.|++|.+++..
T Consensus         9 ~~l~gkrvLViGg-G~va~~ka~~Ll~~GA~VtVvap~   45 (150)
T d1kyqa1           9 HQLKDKRILLIGG-GEVGLTRLYKLMPTGCKLTLVSPD   45 (150)
T ss_dssp             ECCTTCEEEEEEE-SHHHHHHHHHHGGGTCEEEEEEEE
T ss_pred             eeeCCCEEEEECC-CHHHHHHHHHHHHCCCEEEEEeCC
Confidence            4799999999999 679999999999999999999764

>d1t2da1 c.2.1.5 (A:1-150) Lactate dehydrogenase {Malaria parasite (Plasmodium falciparum) [TaxId: 5833]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: LDH N-terminal domain-like
domain: Lactate dehydrogenase
species: Malaria parasite (Plasmodium falciparum) [TaxId: 5833]

Probab=96.47  E-value=0.025  Score=40.85  Aligned_cols=76  Identities=12%  Similarity=0.149  Sum_probs=51.4

Q ss_pred             CEEEEcCCCChHHHHHHHHHHHcCC-eEEEEeCCcchHHHHHHHHHhh---CCCcEEEEEccCCCHHHHHHHHHHHHhHc
Q 044010           48 KVVIITGASSGIGEHLAYEYARRGA-CLALCARREKSLEEVADTAREI---GSPDVITIRADVSKVDDCRSLVEETMNHF  123 (248)
Q Consensus        48 k~~lVtGg~~gIG~aia~~l~~~G~-~V~l~~r~~~~~~~~~~~l~~~---~~~~v~~~~~D~~~~~~~~~~~~~~~~~~  123 (248)
                      .++.|.|+ |.+|.++|..++.++. ++++.++++++.+.....+...   ......+...|  +.           +..
T Consensus         4 ~KI~IIGa-G~VG~~~a~~l~~~~l~el~L~Di~~~~~~g~a~Dl~~~~~~~~~~~~v~~~~--~~-----------~~~   69 (150)
T d1t2da1           4 AKIVLVGS-GMIGGVMATLIVQKNLGDVVLFDIVKNMPHGKALDTSHTNVMAYSNCKVSGSN--TY-----------DDL   69 (150)
T ss_dssp             CEEEEECC-SHHHHHHHHHHHHTTCCEEEEECSSSSHHHHHHHHHHTHHHHHTCCCCEEEEC--CG-----------GGG
T ss_pred             CeEEEECC-CHHHHHHHHHHHhCCCCeEEEEeccCCcceeeecchhhhccccCCCcEEEecc--cc-----------ccc
Confidence            45667785 9999999998888875 8999999988776665555432   11222333222  22           223


Q ss_pred             CCccEEEEccccCC
Q 044010          124 GRLDHLVNNAGISS  137 (248)
Q Consensus       124 g~id~vv~~ag~~~  137 (248)
                      .+-|++|.++|...
T Consensus        70 ~~advvvitag~~~   83 (150)
T d1t2da1          70 AGADVVIVTAGFTK   83 (150)
T ss_dssp             TTCSEEEECCSCSS
T ss_pred             CCCcEEEEeccccc
Confidence            47999999999764

>d1uxja1 c.2.1.5 (A:2-143) Malate dehydrogenase {Chloroflexus aurantiacus [TaxId: 1108]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: LDH N-terminal domain-like
domain: Malate dehydrogenase
species: Chloroflexus aurantiacus [TaxId: 1108]

Probab=96.42  E-value=0.035  Score=39.58  Aligned_cols=110  Identities=18%  Similarity=0.136  Sum_probs=62.1

Q ss_pred             CEEEEcCCCChHHHHHHHHHHHcCC-eEEEEeCCcchHHHHHHHHHhhC---CCcEEEE-EccCCCHHHHHHHHHHHHhH
Q 044010           48 KVVIITGASSGIGEHLAYEYARRGA-CLALCARREKSLEEVADTAREIG---SPDVITI-RADVSKVDDCRSLVEETMNH  122 (248)
Q Consensus        48 k~~lVtGg~~gIG~aia~~l~~~G~-~V~l~~r~~~~~~~~~~~l~~~~---~~~v~~~-~~D~~~~~~~~~~~~~~~~~  122 (248)
                      |++.|.|+ |.+|.++|..|+.++. ++++.+.++++.+.....+....   +....+. .-|..              +
T Consensus         2 ~KI~IIGa-G~VG~~~A~~l~~~~l~dl~l~D~~~~~~~~~~~Dl~~~~~~~~~~~~i~~~~d~~--------------~   66 (142)
T d1uxja1           2 KKISIIGA-GFVGSTTAHWLAAKELGDIVLLDIVEGVPQGKALDLYEASPIEGFDVRVTGTNNYA--------------D   66 (142)
T ss_dssp             CEEEEECC-SHHHHHHHHHHHHHTCSEEEEECSSSSHHHHHHHHHHTTHHHHTCCCCEEEESCGG--------------G
T ss_pred             CeEEEECC-CHHHHHHHHHHHhCCcceEEEEeeccccchhHHHHhhccccccCCCCEEEecCcHH--------------H
Confidence            46666785 9999999999998875 99999998887665554443211   1122222 22221              2


Q ss_pred             cCCccEEEEccccCCcccccccCChHHHHHHHHhhhHHHHHHHHHHhhhhhh-c-CCeEEEEc
Q 044010          123 FGRLDHLVNNAGISSVALFEDIVNITDFKQIMNINFWGSVYTTRFAVPHLRY-T-KGKIVVLS  183 (248)
Q Consensus       123 ~g~id~vv~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~-~-~g~iV~is  183 (248)
                      ..+-|++|.+||......       +.-.+.+..|.    .+++...+.+.+ . ++.++++|
T Consensus        67 ~~~advvvitag~~~~~~-------~~r~dl~~~N~----~i~~~i~~~i~k~~p~aivivvt  118 (142)
T d1uxja1          67 TANSDVIVVTSGAPRKPG-------MSREDLIKVNA----DITRACISQAAPLSPNAVIIMVN  118 (142)
T ss_dssp             GTTCSEEEECCSCC----------------CHHHHH----HHHHHHHHHHGGGCTTCEEEECS
T ss_pred             hcCCCEEEEeeeccCCcC-------cchhHHHhHHH----HHHHHHHHHHhccCCCceEEEeC
Confidence            237899999999754221       12223344454    345555555443 2 35555544

>d1f0ya2 c.2.1.6 (A:12-203) Short chain L-3-hydroxyacyl CoA dehydrogenase {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: 6-phosphogluconate dehydrogenase-like, N-terminal domain
domain: Short chain L-3-hydroxyacyl CoA dehydrogenase
species: Human (Homo sapiens) [TaxId: 9606]

Probab=96.39  E-value=0.0031  Score=47.81  Aligned_cols=44  Identities=23%  Similarity=0.271  Sum_probs=37.6

Q ss_pred             CEEEEcCCCChHHHHHHHHHHHcCCeEEEEeCCcchHHHHHHHHH
Q 044010           48 KVVIITGASSGIGEHLAYEYARRGACLALCARREKSLEEVADTAR   92 (248)
Q Consensus        48 k~~lVtGg~~gIG~aia~~l~~~G~~V~l~~r~~~~~~~~~~~l~   92 (248)
                      |++.|.|+ |-+|..+|..++..|++|++.+++++.+++..+.++
T Consensus         5 kkvaViGa-G~mG~~iA~~~a~~G~~V~l~D~~~~~l~~a~~~i~   48 (192)
T d1f0ya2           5 KHVTVIGG-GLMGAGIAQVAAATGHTVVLVDQTEDILAKSKKGIE   48 (192)
T ss_dssp             CEEEEECC-SHHHHHHHHHHHHTTCEEEEECSCHHHHHHHHHHHH
T ss_pred             EEEEEECc-CHHHHHHHHHHHhCCCcEEEEECChHHHHHHHhhHH
Confidence            67888887 789999999999999999999999987776665544

>d1kola2 c.2.1.1 (A:161-355) Formaldehyde dehydrogenase {Pseudomonas putida [TaxId: 303]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Alcohol dehydrogenase-like, C-terminal domain
domain: Formaldehyde dehydrogenase
species: Pseudomonas putida [TaxId: 303]

Probab=96.38  E-value=0.005  Score=46.69  Aligned_cols=80  Identities=18%  Similarity=0.196  Sum_probs=52.0

Q ss_pred             CCCEEEEcCCCChHHHHHHHHHHHcCC-eEEEEeCCcchHHHHHHHHHhhCCCcEEEEEccCCCHHHHHHHHHHHHhHcC
Q 044010           46 SGKVVIITGASSGIGEHLAYEYARRGA-CLALCARREKSLEEVADTAREIGSPDVITIRADVSKVDDCRSLVEETMNHFG  124 (248)
Q Consensus        46 ~~k~~lVtGg~~gIG~aia~~l~~~G~-~V~l~~r~~~~~~~~~~~l~~~~~~~v~~~~~D~~~~~~~~~~~~~~~~~~g  124 (248)
                      .|.+++|.|+ |++|...+..+...|+ +|+++++++++++.+    ++.+. .   ...|-.+. ++.+.+.++- ...
T Consensus        25 ~G~tVlV~Ga-G~vGl~a~~~ak~~ga~~Vi~~d~~~~rl~~a----~~~Ga-~---~~~~~~~~-~~~~~i~~~t-~g~   93 (195)
T d1kola2          25 PGSTVYVAGA-GPVGLAAAASARLLGAAVVIVGDLNPARLAHA----KAQGF-E---IADLSLDT-PLHEQIAALL-GEP   93 (195)
T ss_dssp             TTCEEEEECC-SHHHHHHHHHHHHTTCSEEEEEESCHHHHHHH----HHTTC-E---EEETTSSS-CHHHHHHHHH-SSS
T ss_pred             CCCEEEEECc-CHHHHHHHHHHHhhcccceeeecccchhhHhh----hhccc-c---EEEeCCCc-CHHHHHHHHh-CCC
Confidence            5889999976 8999888887777887 788988887665433    23332 1   22344443 3434333332 223


Q ss_pred             CccEEEEccccC
Q 044010          125 RLDHLVNNAGIS  136 (248)
Q Consensus       125 ~id~vv~~ag~~  136 (248)
                      .+|+++.++|..
T Consensus        94 g~D~vid~vG~~  105 (195)
T d1kola2          94 EVDCAVDAVGFE  105 (195)
T ss_dssp             CEEEEEECCCTT
T ss_pred             CcEEEEECcccc
Confidence            699999999854

>d1ojua1 c.2.1.5 (A:22-163) Malate dehydrogenase {Archaeon Archaeoglobus fulgidus [TaxId: 2234]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: LDH N-terminal domain-like
domain: Malate dehydrogenase
species: Archaeon Archaeoglobus fulgidus [TaxId: 2234]

Probab=96.38  E-value=0.038  Score=39.43  Aligned_cols=109  Identities=16%  Similarity=0.051  Sum_probs=64.3

Q ss_pred             EEEEcCCCChHHHHHHHHHHHcCC--eEEEEeCCcchHHHHHHHHHhh---CCCcEEEEE-ccCCCHHHHHHHHHHHHhH
Q 044010           49 VVIITGASSGIGEHLAYEYARRGA--CLALCARREKSLEEVADTAREI---GSPDVITIR-ADVSKVDDCRSLVEETMNH  122 (248)
Q Consensus        49 ~~lVtGg~~gIG~aia~~l~~~G~--~V~l~~r~~~~~~~~~~~l~~~---~~~~v~~~~-~D~~~~~~~~~~~~~~~~~  122 (248)
                      ++.|.|+ |.+|.++|..++.+|.  ++++.++++++.+.....+++.   .+....... -|.   +           +
T Consensus         2 KI~IIGa-G~VG~~~a~~l~~~~~~~elvL~Di~~~~~~g~alDl~~~~~~~~~~~~i~~~~d~---~-----------~   66 (142)
T d1ojua1           2 KLGFVGA-GRVGSTSAFTCLLNLDVDEIALVDIAEDLAVGEAMDLAHAAAGIDKYPKIVGGADY---S-----------L   66 (142)
T ss_dssp             EEEEECC-SHHHHHHHHHHHHHSCCSEEEEECSSHHHHHHHHHHHHHHHHTTTCCCEEEEESCG---G-----------G
T ss_pred             EEEEECc-CHHHHHHHHHHHhcCcCceEEEEecccchhhHHHHHHhhhccccCCCCccccCCCH---H-----------H
Confidence            3566785 9999999999998875  7999999988766555445432   122222222 232   2           2


Q ss_pred             cCCccEEEEccccCCcccccccCChHHHHHHHHhhhHHHHHHHHHHhhhhhhc--CCeEEEEc
Q 044010          123 FGRLDHLVNNAGISSVALFEDIVNITDFKQIMNINFWGSVYTTRFAVPHLRYT--KGKIVVLS  183 (248)
Q Consensus       123 ~g~id~vv~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~--~g~iV~is  183 (248)
                      ..+-|++|.+||......    .+   -.+.+..|..-.    +...+.+.+.  ++.++++|
T Consensus        67 ~~~adiVvitag~~~~~g----~~---r~~l~~~n~~i~----~~i~~~i~~~~p~aivivvt  118 (142)
T d1ojua1          67 LKGSEIIVVTAGLARKPG----MT---RLDLAHKNAGII----KDIAKKIVENAPESKILVVT  118 (142)
T ss_dssp             GTTCSEEEECCCCCCCSS----CC---HHHHHHHHHHHH----HHHHHHHHTTSTTCEEEECS
T ss_pred             hccccEEEEeccccCCCC----Cc---hHHHHHHhhHHH----HHHHHHHHhhCCCcEEEEec
Confidence            247899999999653221    12   233444454444    4444444332  35556555

>d1h2ba2 c.2.1.1 (A:155-326) Alcohol dehydrogenase {Archaeon Aeropyrum pernix [TaxId: 56636]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Alcohol dehydrogenase-like, C-terminal domain
domain: Alcohol dehydrogenase
species: Archaeon Aeropyrum pernix [TaxId: 56636]

Probab=96.35  E-value=0.0043  Score=45.84  Aligned_cols=78  Identities=19%  Similarity=0.258  Sum_probs=49.5

Q ss_pred             CCCEEEEcCCCChHHHHHHHHHHHcCC-eEEEEeCCcchHHHHHHHHHhhCCCcEEEEEccCCCHHHHHHHHHHHHhHcC
Q 044010           46 SGKVVIITGASSGIGEHLAYEYARRGA-CLALCARREKSLEEVADTAREIGSPDVITIRADVSKVDDCRSLVEETMNHFG  124 (248)
Q Consensus        46 ~~k~~lVtGg~~gIG~aia~~l~~~G~-~V~l~~r~~~~~~~~~~~l~~~~~~~v~~~~~D~~~~~~~~~~~~~~~~~~g  124 (248)
                      .|.+++|.|+ |++|...+..+...|+ +|+++++++++++.    .++.+..  .+  .|.++ +..++..+..  ...
T Consensus        32 ~g~~vli~Ga-G~vG~~~~~~a~~~g~~~vv~~~~~~~k~~~----~~~~ga~--~~--i~~~~-~~~~~~~~~~--~~~   99 (172)
T d1h2ba2          32 PGAYVAIVGV-GGLGHIAVQLLKVMTPATVIALDVKEEKLKL----AERLGAD--HV--VDARR-DPVKQVMELT--RGR   99 (172)
T ss_dssp             TTCEEEEECC-SHHHHHHHHHHHHHCCCEEEEEESSHHHHHH----HHHTTCS--EE--EETTS-CHHHHHHHHT--TTC
T ss_pred             CCCEEEEeCC-ChHHHHHHHHHHhhcCcccccccchhHHHHH----Hhhcccc--ee--ecCcc-cHHHHHHHhh--CCC
Confidence            5789999875 9999998888888887 67777887765443    3333432  22  23332 3333333221  123


Q ss_pred             CccEEEEcccc
Q 044010          125 RLDHLVNNAGI  135 (248)
Q Consensus       125 ~id~vv~~ag~  135 (248)
                      .+|++|.++|.
T Consensus       100 g~d~vid~~g~  110 (172)
T d1h2ba2         100 GVNVAMDFVGS  110 (172)
T ss_dssp             CEEEEEESSCC
T ss_pred             CceEEEEecCc
Confidence            69999999874

>d1rjwa2 c.2.1.1 (A:138-305) Alcohol dehydrogenase {Bacillus stearothermophilus [TaxId: 1422]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Alcohol dehydrogenase-like, C-terminal domain
domain: Alcohol dehydrogenase
species: Bacillus stearothermophilus [TaxId: 1422]

Probab=96.28  E-value=0.011  Score=43.04  Aligned_cols=41  Identities=22%  Similarity=0.246  Sum_probs=33.8

Q ss_pred             CCCEEEEcCCCChHHHHHHHHHHHcCCeEEEEeCCcchHHHH
Q 044010           46 SGKVVIITGASSGIGEHLAYEYARRGACLALCARREKSLEEV   87 (248)
Q Consensus        46 ~~k~~lVtGg~~gIG~aia~~l~~~G~~V~l~~r~~~~~~~~   87 (248)
                      +|.+++|.|+ |++|...+..+...|++|+++++++++.+.+
T Consensus        27 ~g~~vlv~G~-G~iG~~a~~~a~~~g~~v~~~~~~~~r~~~~   67 (168)
T d1rjwa2          27 PGEWVAIYGI-GGLGHVAVQYAKAMGLNVVAVDIGDEKLELA   67 (168)
T ss_dssp             TTCEEEEECC-STTHHHHHHHHHHTTCEEEEECSCHHHHHHH
T ss_pred             CCCEEEEeec-ccchhhhhHHHhcCCCeEeccCCCHHHhhhh
Confidence            5789999865 9999998888888899999999988765543

>d1wxxa2 c.66.1.51 (A:65-382) Hypothetical protein TTHA1280, middle and C-terminal domains {Thermus thermophilus [TaxId: 274]}

class: Alpha and beta proteins (a/b)
fold: S-adenosyl-L-methionine-dependent methyltransferases
superfamily: S-adenosyl-L-methionine-dependent methyltransferases
family: hypothetical RNA methyltransferase
domain: Hypothetical protein TTHA1280, middle and C-terminal domains
species: Thermus thermophilus [TaxId: 274]

Probab=96.28  E-value=0.087  Score=42.64  Aligned_cols=157  Identities=12%  Similarity=0.068  Sum_probs=90.2

Q ss_pred             CCCCCEEEEcCCC-ChHHHHHHHHHHHcCCeEEEEeCCcchHHHHHHHHHhhCCCcEEEEEccCCCHHHHHHHHHHHHhH
Q 044010           44 DVSGKVVIITGAS-SGIGEHLAYEYARRGACLALCARREKSLEEVADTAREIGSPDVITIRADVSKVDDCRSLVEETMNH  122 (248)
Q Consensus        44 ~~~~k~~lVtGg~-~gIG~aia~~l~~~G~~V~l~~r~~~~~~~~~~~l~~~~~~~v~~~~~D~~~~~~~~~~~~~~~~~  122 (248)
                      ..+|+++|=.++. |+++.++    +..|.+|+.++.++...+.+.+..+..+-..+.++..|..+.      .+...+.
T Consensus       143 ~~~g~rVLDl~~gtG~~s~~~----a~g~~~V~~vD~s~~al~~a~~n~~~ngl~~~~~i~~d~~~~------~~~~~~~  212 (318)
T d1wxxa2         143 RFRGERALDVFSYAGGFALHL----ALGFREVVAVDSSAEALRRAEENARLNGLGNVRVLEANAFDL------LRRLEKE  212 (318)
T ss_dssp             GCCEEEEEEETCTTTHHHHHH----HHHEEEEEEEESCHHHHHHHHHHHHHTTCTTEEEEESCHHHH------HHHHHHT
T ss_pred             HhCCCeeeccCCCCcHHHHHH----HhcCCcEEeecchHHHHHHHHHHHHHcCCCCcceeeccHHHH------hhhhHhh
Confidence            4578888866664 5665543    344669999999999988888888776655788888887443      2233344


Q ss_pred             cCCccEEEEccccCCcccccccCChHHHHHHHHhhhHHHHHHHHHHhhhhhhcCCeEEEEcCccccccCCCCccchHHHH
Q 044010          123 FGRLDHLVNNAGISSVALFEDIVNITDFKQIMNINFWGSVYTTRFAVPHLRYTKGKIVVLSSAASWLTAPRMSFYNASKA  202 (248)
Q Consensus       123 ~g~id~vv~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~g~iV~isS~~~~~~~~~~~~Y~~sKa  202 (248)
                      .+++|.|+.+.........    ......+       ....+.+.+...++ .+|.++ .+|+...          .+..
T Consensus       213 ~~~fD~Vi~DpP~~~~~~~----~~~~~~~-------~~~~l~~~a~~lLk-pGG~Lv-~~scs~~----------~~~~  269 (318)
T d1wxxa2         213 GERFDLVVLDPPAFAKGKK----DVERAYR-------AYKEVNLRAIKLLK-EGGILA-TASCSHH----------MTEP  269 (318)
T ss_dssp             TCCEEEEEECCCCSCCSTT----SHHHHHH-------HHHHHHHHHHHTEE-EEEEEE-EEECCTT----------SCHH
T ss_pred             hcCCCEEEEcCCccccchH----HHHHHHH-------HHHHHHHHHHHHcC-CCCEEE-EEeCCcc----------cCHH
Confidence            4689999999765443321    1111111       22345566666654 455554 4444321          1222


Q ss_pred             HHHHHHHHHHHHhCCCeEEEEEecCccccCc
Q 044010          203 ALVLFFETLRVELGSDVGVTIVTPGFIESEL  233 (248)
Q Consensus       203 al~~l~~~la~~~~~~i~v~~v~pg~v~T~~  233 (248)
                      -+..++...+.+.+..+++....--+.+=|.
T Consensus       270 ~f~~~v~~a~~~a~~~~~~~~~~~~~~DhP~  300 (318)
T d1wxxa2         270 LFYAMVAEAAQDAHRLLRVVEKRGQPFDHPV  300 (318)
T ss_dssp             HHHHHHHHHHHHTTCCEEEEEEECCCTTSCC
T ss_pred             HHHHHHHHHHHHcCCCEEEEEecCCCCCCCC
Confidence            2444455555555555666544333334333

>d2pgda2 c.2.1.6 (A:1-176) 6-phosphogluconate dehydrogenase {Sheep (Ovis orientalis aries) [TaxId: 9940]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: 6-phosphogluconate dehydrogenase-like, N-terminal domain
domain: 6-phosphogluconate dehydrogenase
species: Sheep (Ovis orientalis aries) [TaxId: 9940]

Probab=96.27  E-value=0.014  Score=43.11  Aligned_cols=84  Identities=11%  Similarity=0.134  Sum_probs=58.0

Q ss_pred             CEEEEcCCCChHHHHHHHHHHHcCCeEEEEeCCcchHHHHHHHH---------------HhhCCCcEEEEEccCCCHHHH
Q 044010           48 KVVIITGASSGIGEHLAYEYARRGACLALCARREKSLEEVADTA---------------REIGSPDVITIRADVSKVDDC  112 (248)
Q Consensus        48 k~~lVtGg~~gIG~aia~~l~~~G~~V~l~~r~~~~~~~~~~~l---------------~~~~~~~v~~~~~D~~~~~~~  112 (248)
                      +.+-+.|- |-+|.++|++|++.|++|.+.+|++++.++..++-               .+.-. ....+...+.+.+.+
T Consensus         3 ~nIg~IGl-G~MG~~mA~~L~~~G~~V~v~dr~~~~~~~l~~~~~~~~~~~~a~~~~~~~~~~~-~~~~ii~~~~~~~~v   80 (176)
T d2pgda2           3 ADIALIGL-AVMGQNLILNMNDHGFVVCAFNRTVSKVDDFLANEAKGTKVLGAHSLEEMVSKLK-KPRRIILLVKAGQAV   80 (176)
T ss_dssp             BSEEEECC-SHHHHHHHHHHHHTTCCEEEECSSTHHHHHHHHTTTTTSSCEECSSHHHHHHHBC-SSCEEEECSCTTHHH
T ss_pred             CcEEEEeE-hHHHHHHHHHHHHCCCeEEEEcCCHHHHHHHHHhccccccccchhhhhhhhhhhc-ccceEEEecCchHHH
Confidence            34556655 89999999999999999999999998877765421               11111 223444456666778


Q ss_pred             HHHHHHHHhHcCCccEEEEcc
Q 044010          113 RSLVEETMNHFGRLDHLVNNA  133 (248)
Q Consensus       113 ~~~~~~~~~~~g~id~vv~~a  133 (248)
                      .+..+.+.....+=+++|...
T Consensus        81 ~~v~~~l~~~~~~g~iiid~s  101 (176)
T d2pgda2          81 DNFIEKLVPLLDIGDIIIDGG  101 (176)
T ss_dssp             HHHHHHHHHHCCTTCEEEECS
T ss_pred             HHHHHHHHhccccCcEEEecC
Confidence            888887776655556666664

>d1e3ia2 c.2.1.1 (A:168-341) Alcohol dehydrogenase {Mouse (Mus musculus), class II [TaxId: 10090]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Alcohol dehydrogenase-like, C-terminal domain
domain: Alcohol dehydrogenase
species: Mouse (Mus musculus), class II [TaxId: 10090]

Probab=96.27  E-value=0.0076  Score=44.74  Aligned_cols=80  Identities=15%  Similarity=0.260  Sum_probs=52.2

Q ss_pred             CCCCEEEEcCCCChHHHHHHHHHHHcCC-eEEEEeCCcchHHHHHHHHHhhCCCcEEEEEccCCCH-HHHHHHHHHHHhH
Q 044010           45 VSGKVVIITGASSGIGEHLAYEYARRGA-CLALCARREKSLEEVADTAREIGSPDVITIRADVSKV-DDCRSLVEETMNH  122 (248)
Q Consensus        45 ~~~k~~lVtGg~~gIG~aia~~l~~~G~-~V~l~~r~~~~~~~~~~~l~~~~~~~v~~~~~D~~~~-~~~~~~~~~~~~~  122 (248)
                      -+|.+++|.|+ |+||...+..+...|+ +|+++++++++.+-.    ++.+...  +  .|.... +..++..+..  .
T Consensus        27 ~~G~~VlV~G~-G~iGl~a~~~ak~~Ga~~Vi~~d~~~~r~~~a----~~~Ga~~--~--i~~~~~~~~~~~~~~~~--~   95 (174)
T d1e3ia2          27 TPGSTCAVFGL-GCVGLSAIIGCKIAGASRIIAIDINGEKFPKA----KALGATD--C--LNPRELDKPVQDVITEL--T   95 (174)
T ss_dssp             CTTCEEEEECC-SHHHHHHHHHHHHTTCSEEEEECSCGGGHHHH----HHTTCSE--E--ECGGGCSSCHHHHHHHH--H
T ss_pred             CCCCEEEEECC-ChHHHHHHHHHHHhCCceeeeeccchHHHHHH----HHhCCCc--c--cCCccchhhhhhhHhhh--h
Confidence            36789999965 9999999999989998 688888888765433    2233221  2  233222 2233333332  2


Q ss_pred             cCCccEEEEcccc
Q 044010          123 FGRLDHLVNNAGI  135 (248)
Q Consensus       123 ~g~id~vv~~ag~  135 (248)
                      .+.+|++|.++|.
T Consensus        96 ~~G~d~vie~~G~  108 (174)
T d1e3ia2          96 AGGVDYSLDCAGT  108 (174)
T ss_dssp             TSCBSEEEESSCC
T ss_pred             cCCCcEEEEeccc
Confidence            3589999999884

>d5mdha1 c.2.1.5 (A:1-154) Malate dehydrogenase {Pig (Sus scrofa) [TaxId: 9823]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: LDH N-terminal domain-like
domain: Malate dehydrogenase
species: Pig (Sus scrofa) [TaxId: 9823]

Probab=96.22  E-value=0.041  Score=39.68  Aligned_cols=79  Identities=20%  Similarity=0.197  Sum_probs=46.8

Q ss_pred             EEEEcCCCChHHHHHHHHHHHcCC-------eEEEEeCCcc--hHHHHHHHHHhhCCCcEEEEEccCCCHHHHHHHHHHH
Q 044010           49 VVIITGASSGIGEHLAYEYARRGA-------CLALCARREK--SLEEVADTAREIGSPDVITIRADVSKVDDCRSLVEET  119 (248)
Q Consensus        49 ~~lVtGg~~gIG~aia~~l~~~G~-------~V~l~~r~~~--~~~~~~~~l~~~~~~~v~~~~~D~~~~~~~~~~~~~~  119 (248)
                      ++.|+||+|.+|.+++..|+..+.       .+++.+.+..  +++....++..........+..--.++          
T Consensus         5 KV~IiGA~G~VG~~la~~l~~~~~~~~~~~~~L~l~d~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~----------   74 (154)
T d5mdha1           5 RVLVTGAAGQIAYSLLYSIGNGSVFGKDQPIILVLLDITPMMGVLDGVLMELQDCALPLLKDVIATDKEE----------   74 (154)
T ss_dssp             EEEESSTTSHHHHTTHHHHHTTTTTCTTCCEEEEEECCGGGHHHHHHHHHHHHHTCCTTEEEEEEESCHH----------
T ss_pred             EEEEECCCCHHHHHHHHHHHHHHhcCCCCccEEEEecCccchhhhhhhhhhhcccccccccccccCcccc----------
Confidence            789999999999999999987542       3566555443  233333333333322332222211111          


Q ss_pred             HhHcCCccEEEEccccCCc
Q 044010          120 MNHFGRLDHLVNNAGISSV  138 (248)
Q Consensus       120 ~~~~g~id~vv~~ag~~~~  138 (248)
                       +.+.+.|++|.++|....
T Consensus        75 -~~~~~~dvVVitag~~~~   92 (154)
T d5mdha1          75 -IAFKDLDVAILVGSMPRR   92 (154)
T ss_dssp             -HHTTTCSEEEECCSCCCC
T ss_pred             -cccCCceEEEEecccCCC
Confidence             223479999999997643

>d1jw9b_ c.111.1.1 (B:) Molybdenum cofactor biosynthesis protein MoeB {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: Activating enzymes of the ubiquitin-like proteins
superfamily: Activating enzymes of the ubiquitin-like proteins
family: Molybdenum cofactor biosynthesis protein MoeB
domain: Molybdenum cofactor biosynthesis protein MoeB
species: Escherichia coli [TaxId: 562]

Probab=96.17  E-value=0.015  Score=45.44  Aligned_cols=38  Identities=26%  Similarity=0.324  Sum_probs=33.5

Q ss_pred             cCCCCCEEEEcCCCChHHHHHHHHHHHcCC-eEEEEeCCc
Q 044010           43 EDVSGKVVIITGASSGIGEHLAYEYARRGA-CLALCARRE   81 (248)
Q Consensus        43 ~~~~~k~~lVtGg~~gIG~aia~~l~~~G~-~V~l~~r~~   81 (248)
                      +++++++++|.|+ ||+|..+++.|+..|. ++.++|.+.
T Consensus        26 ~kL~~~~VliiG~-GglGs~va~~La~~Gvg~i~lvD~D~   64 (247)
T d1jw9b_          26 EALKDSRVLIVGL-GGLGCAASQYLASAGVGNLTLLDFDT   64 (247)
T ss_dssp             HHHHHCEEEEECC-SHHHHHHHHHHHHHTCSEEEEECCCB
T ss_pred             HHHhCCCEEEECC-CHHHHHHHHHHHHcCCCeEEEECCcc
Confidence            3688999999985 8999999999999998 899988753

>d1wdka3 c.2.1.6 (A:311-496) Fatty oxidation complex alpha subunit, middle domain {Pseudomonas fragi [TaxId: 296]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: 6-phosphogluconate dehydrogenase-like, N-terminal domain
domain: Fatty oxidation complex alpha subunit, middle domain
species: Pseudomonas fragi [TaxId: 296]

Probab=96.05  E-value=0.0075  Score=45.30  Aligned_cols=43  Identities=26%  Similarity=0.356  Sum_probs=35.4

Q ss_pred             CEEEEcCCCChHHHHHHHHHHHcCCeEEEEeCCcchHHHHHHHH
Q 044010           48 KVVIITGASSGIGEHLAYEYARRGACLALCARREKSLEEVADTA   91 (248)
Q Consensus        48 k~~lVtGg~~gIG~aia~~l~~~G~~V~l~~r~~~~~~~~~~~l   91 (248)
                      |++-|.|+ |-+|..+|..++..|++|++.+++++.+++..+.+
T Consensus         5 ~~vaViGa-G~mG~~iA~~~a~~G~~V~l~D~~~~~l~~~~~~i   47 (186)
T d1wdka3           5 KQAAVLGA-GIMGGGIAYQSASKGTPILMKDINEHGIEQGLAEA   47 (186)
T ss_dssp             SSEEEECC-HHHHHHHHHHHHHTTCCEEEECSSHHHHHHHHHHH
T ss_pred             CEEEEECc-CHHHHHHHHHHHhCCCeEEEEECCHHHHhhhhhhh
Confidence            35677777 88999999999999999999999987766655443

>d1ygya1 c.2.1.4 (A:99-282) Phosphoglycerate dehydrogenase {Mycobacterium tuberculosis [TaxId: 1773]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Formate/glycerate dehydrogenases, NAD-domain
domain: Phosphoglycerate dehydrogenase
species: Mycobacterium tuberculosis [TaxId: 1773]

Probab=95.94  E-value=0.014  Score=43.65  Aligned_cols=41  Identities=24%  Similarity=0.289  Sum_probs=35.3

Q ss_pred             ccCCCCCEEEEcCCCChHHHHHHHHHHHcCCeEEEEeCCcch
Q 044010           42 SEDVSGKVVIITGASSGIGEHLAYEYARRGACLALCARREKS   83 (248)
Q Consensus        42 ~~~~~~k~~lVtGg~~gIG~aia~~l~~~G~~V~l~~r~~~~   83 (248)
                      ..++.||++.|.|. |.||+++++.+...|.+|+..++...+
T Consensus        39 ~~~l~~k~vgiiG~-G~IG~~va~~~~~fg~~v~~~d~~~~~   79 (184)
T d1ygya1          39 GTEIFGKTVGVVGL-GRIGQLVAQRIAAFGAYVVAYDPYVSP   79 (184)
T ss_dssp             BCCCTTCEEEEECC-SHHHHHHHHHHHTTTCEEEEECTTSCH
T ss_pred             cccccceeeeeccc-cchhHHHHHHhhhccceEEeecCCCCh
Confidence            34688999999875 999999999999999999999887654

>d1c1da1 c.2.1.7 (A:149-349) Phenylalanine dehydrogenase {Rhodococcus sp., M4 [TaxId: 1831]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Aminoacid dehydrogenase-like, C-terminal domain
domain: Phenylalanine dehydrogenase
species: Rhodococcus sp., M4 [TaxId: 1831]

Probab=95.82  E-value=0.017  Score=43.97  Aligned_cols=45  Identities=22%  Similarity=0.324  Sum_probs=38.5

Q ss_pred             ccCCCCCEEEEcCCCChHHHHHHHHHHHcCCeEEEEeCCcchHHHH
Q 044010           42 SEDVSGKVVIITGASSGIGEHLAYEYARRGACLALCARREKSLEEV   87 (248)
Q Consensus        42 ~~~~~~k~~lVtGg~~gIG~aia~~l~~~G~~V~l~~r~~~~~~~~   87 (248)
                      ..+++||+++|-| -|.+|..+|+.|.+.|++|++.+.+.......
T Consensus        22 ~~~L~gk~v~IqG-~G~VG~~~A~~L~~~Gakvvv~d~d~~~~~~~   66 (201)
T d1c1da1          22 LGSLDGLTVLVQG-LGAVGGSLASLAAEAGAQLLVADTDTERVAHA   66 (201)
T ss_dssp             CCCSTTCEEEEEC-CSHHHHHHHHHHHHTTCEEEEECSCHHHHHHH
T ss_pred             CCCCCCCEEEEEC-CCHHHHHHHHHHHHCCCEEEEecchHHHHHHH
Confidence            4589999999997 58899999999999999999999887655443

>d2fy8a1 c.2.1.9 (A:116-244) Potassium channel-related protein MthK {Archaeon Methanothermobacter thermautotrophicus [TaxId: 145262]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Potassium channel NAD-binding domain
domain: Potassium channel-related protein MthK
species: Archaeon Methanothermobacter thermautotrophicus [TaxId: 145262]

Probab=95.81  E-value=0.007  Score=42.43  Aligned_cols=69  Identities=20%  Similarity=0.197  Sum_probs=49.2

Q ss_pred             CEEEEcCCCChHHHHHHHHHHHcCCeEEEEeCCcchHHHHHHHHHhhCCCcEEEEEccCCCHHHHHHHHHHHHhHcCCcc
Q 044010           48 KVVIITGASSGIGEHLAYEYARRGACLALCARREKSLEEVADTAREIGSPDVITIRADVSKVDDCRSLVEETMNHFGRLD  127 (248)
Q Consensus        48 k~~lVtGg~~gIG~aia~~l~~~G~~V~l~~r~~~~~~~~~~~l~~~~~~~v~~~~~D~~~~~~~~~~~~~~~~~~g~id  127 (248)
                      |+++|.|. |.+|+.+++.|  +|.+|+++..+++..+..    ...   .+.++.+|.++++.++++      ...+.+
T Consensus         1 kHivI~G~-g~~g~~l~~~L--~~~~i~vi~~d~~~~~~~----~~~---~~~~i~Gd~~~~~~L~~a------~i~~A~   64 (129)
T d2fy8a1           1 RHVVICGW-SESTLECLREL--RGSEVFVLAEDENVRKKV----LRS---GANFVHGDPTRVSDLEKA------NVRGAR   64 (129)
T ss_dssp             CCEEEESC-CHHHHHHHHTS--CGGGEEEEESCTTHHHHH----HHT---TCEEEESCTTSHHHHHHT------TCTTCS
T ss_pred             CEEEEECC-CHHHHHHHHHH--cCCCCEEEEcchHHHHHH----Hhc---CccccccccCCHHHHHHh------hhhcCc
Confidence            56888876 78999999998  466788888888765443    222   467888999999777554      123567


Q ss_pred             EEEEc
Q 044010          128 HLVNN  132 (248)
Q Consensus       128 ~vv~~  132 (248)
                      .+|..
T Consensus        65 ~vi~~   69 (129)
T d2fy8a1          65 AVIVN   69 (129)
T ss_dssp             EEEEC
T ss_pred             EEEEe
Confidence            77654

>d1vpda2 c.2.1.6 (A:3-163) Hydroxyisobutyrate dehydrogenase {Salmonella typhimurium [TaxId: 90371]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: 6-phosphogluconate dehydrogenase-like, N-terminal domain
domain: Hydroxyisobutyrate dehydrogenase
species: Salmonella typhimurium [TaxId: 90371]

Probab=95.61  E-value=0.011  Score=43.05  Aligned_cols=83  Identities=12%  Similarity=0.157  Sum_probs=49.7

Q ss_pred             EEEcCCCChHHHHHHHHHHHcCCeEEEEeCCcchHHHHHHHHHhhCC------CcEEEEEccCCCHHHHHHHH---HHHH
Q 044010           50 VIITGASSGIGEHLAYEYARRGACLALCARREKSLEEVADTAREIGS------PDVITIRADVSKVDDCRSLV---EETM  120 (248)
Q Consensus        50 ~lVtGg~~gIG~aia~~l~~~G~~V~l~~r~~~~~~~~~~~l~~~~~------~~v~~~~~D~~~~~~~~~~~---~~~~  120 (248)
                      +-|. |-|-+|.++|++|+++|++|.+.+|++++.++..+.-.....      .+..++..=+.+.+++++++   +.+.
T Consensus         3 IgiI-GlG~MG~~~A~~L~~~G~~V~~~d~~~~~~~~~~~~~~~~~~~~~e~~~~~d~ii~~v~~~~~v~~v~~~~~~~~   81 (161)
T d1vpda2           3 VGFI-GLGIMGKPMSKNLLKAGYSLVVSDRNPEAIADVIAAGAETASTAKAIAEQCDVIITMLPNSPHVKEVALGENGII   81 (161)
T ss_dssp             EEEE-CCSTTHHHHHHHHHHTTCEEEEECSCHHHHHHHHHTTCEECSSHHHHHHHCSEEEECCSSHHHHHHHHHSTTCHH
T ss_pred             EEEE-ehhHHHHHHHHHHHHCCCeEEEEeCCcchhHHHHHhhhhhcccHHHHHhCCCeEEEEcCCHHHHHHHHhCCcchh
Confidence            3444 458999999999999999999999998776665431100000      02233444455666676665   2233


Q ss_pred             hHcCCccEEEEcc
Q 044010          121 NHFGRLDHLVNNA  133 (248)
Q Consensus       121 ~~~g~id~vv~~a  133 (248)
                      ....+-+++|...
T Consensus        82 ~~~~~g~iiid~s   94 (161)
T d1vpda2          82 EGAKPGTVLIDMS   94 (161)
T ss_dssp             HHCCTTCEEEECS
T ss_pred             hccCCCCEEEECC
Confidence            3333344555543

>d1gdha1 c.2.1.4 (A:101-291) D-glycerate dehydrogenase {Hyphomicrobium methylovorum [TaxId: 84]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Formate/glycerate dehydrogenases, NAD-domain
domain: D-glycerate dehydrogenase
species: Hyphomicrobium methylovorum [TaxId: 84]

Probab=95.49  E-value=0.048  Score=40.90  Aligned_cols=40  Identities=23%  Similarity=0.204  Sum_probs=34.8

Q ss_pred             cCCCCCEEEEcCCCChHHHHHHHHHHHcCCeEEEEeCCcch
Q 044010           43 EDVSGKVVIITGASSGIGEHLAYEYARRGACLALCARREKS   83 (248)
Q Consensus        43 ~~~~~k~~lVtGg~~gIG~aia~~l~~~G~~V~l~~r~~~~   83 (248)
                      .+++||++.|.|. |.||+.+++.+...|.+|+..++....
T Consensus        43 ~~l~g~tvgIiG~-G~IG~~va~~l~~fg~~v~~~d~~~~~   82 (191)
T d1gdha1          43 EKLDNKTLGIYGF-GSIGQALAKRAQGFDMDIDYFDTHRAS   82 (191)
T ss_dssp             CCCTTCEEEEECC-SHHHHHHHHHHHTTTCEEEEECSSCCC
T ss_pred             ceecccceEEeec-ccchHHHHHHHHhhccccccccccccc
Confidence            4678999999976 899999999999999999998886654

>d1dxya1 c.2.1.4 (A:101-299) D-2-hydroxyisocaproate dehydrogenase {Lactobacillus casei [TaxId: 1582]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Formate/glycerate dehydrogenases, NAD-domain
domain: D-2-hydroxyisocaproate dehydrogenase
species: Lactobacillus casei [TaxId: 1582]

Probab=95.44  E-value=0.073  Score=40.07  Aligned_cols=101  Identities=11%  Similarity=0.119  Sum_probs=60.9

Q ss_pred             ccCCCCCEEEEcCCCChHHHHHHHHHHHcCCeEEEEeCCcchH-------HHHHHHHHhhCCCcEEEEEccCCCHHH---
Q 044010           42 SEDVSGKVVIITGASSGIGEHLAYEYARRGACLALCARREKSL-------EEVADTAREIGSPDVITIRADVSKVDD---  111 (248)
Q Consensus        42 ~~~~~~k~~lVtGg~~gIG~aia~~l~~~G~~V~l~~r~~~~~-------~~~~~~l~~~~~~~v~~~~~D~~~~~~---  111 (248)
                      ..++.||++.|.|. |.||+.+++.+...|++|+..++...+.       ... +++-+.  .++..+.+-+++...   
T Consensus        40 ~~~l~~ktvgIiG~-G~IG~~va~~l~~fg~~v~~~d~~~~~~~~~~~~~~~l-~~l~~~--~D~v~~~~plt~~T~~li  115 (199)
T d1dxya1          40 GKELGQQTVGVMGT-GHIGQVAIKLFKGFGAKVIAYDPYPMKGDHPDFDYVSL-EDLFKQ--SDVIDLHVPGIEQNTHII  115 (199)
T ss_dssp             CCCGGGSEEEEECC-SHHHHHHHHHHHHTTCEEEEECSSCCSSCCTTCEECCH-HHHHHH--CSEEEECCCCCGGGTTSB
T ss_pred             cccccceeeeeeec-ccccccccccccccceeeeccCCccchhhhcchhHHHH-HHHHHh--cccceeeecccccccccc
Confidence            35789999999976 8999999999999999999998854321       111 222222  256777777766432   


Q ss_pred             HHHHHHHHHhHcCCccEEEEccccCCcccccccCChHHHHHHHHhh
Q 044010          112 CRSLVEETMNHFGRLDHLVNNAGISSVALFEDIVNITDFKQIMNIN  157 (248)
Q Consensus       112 ~~~~~~~~~~~~g~id~vv~~ag~~~~~~~~~~~~~~~~~~~~~~n  157 (248)
                      =++.++.    . +-+.++-|+|...   .   .+.+++.+.++.+
T Consensus       116 ~~~~l~~----m-k~~a~lIN~aRG~---v---vde~aL~~aL~~g  150 (199)
T d1dxya1         116 NEAAFNL----M-KPGAIVINTARPN---L---IDTQAMLSNLKSG  150 (199)
T ss_dssp             CHHHHHH----S-CTTEEEEECSCTT---S---BCHHHHHHHHHTT
T ss_pred             cHHHhhc----c-CCceEEEecccHh---h---hhhHHHHHHHhcC
Confidence            1122222    2 4556666666433   2   2345555554433

>d1wy7a1 c.66.1.32 (A:4-204) Hypothetical protein PH1948 {Archaeon Pyrococcus horikoshii [TaxId: 53953]}

class: Alpha and beta proteins (a/b)
fold: S-adenosyl-L-methionine-dependent methyltransferases
superfamily: S-adenosyl-L-methionine-dependent methyltransferases
family: Ta1320-like
domain: Hypothetical protein PH1948
species: Archaeon Pyrococcus horikoshii [TaxId: 53953]

Probab=95.29  E-value=0.055  Score=40.80  Aligned_cols=78  Identities=23%  Similarity=0.278  Sum_probs=58.5

Q ss_pred             ccCCCCCEEEEcCCCCh-HHHHHHHHHHHcCC-eEEEEeCCcchHHHHHHHHHhhCCCcEEEEEccCCCHHHHHHHHHHH
Q 044010           42 SEDVSGKVVIITGASSG-IGEHLAYEYARRGA-CLALCARREKSLEEVADTAREIGSPDVITIRADVSKVDDCRSLVEET  119 (248)
Q Consensus        42 ~~~~~~k~~lVtGg~~g-IG~aia~~l~~~G~-~V~l~~r~~~~~~~~~~~l~~~~~~~v~~~~~D~~~~~~~~~~~~~~  119 (248)
                      ..+++|+++|=.|++.| +|.    .++.+|+ +|+.++.+++..+.+.+.++..+. +..++..|+.+.          
T Consensus        42 ~~dl~g~~vLDlg~GtG~l~i----~a~~~g~~~v~~vdi~~~~~~~a~~N~~~~~~-~~~~~~~d~~~~----------  106 (201)
T d1wy7a1          42 LGDIEGKVVADLGAGTGVLSY----GALLLGAKEVICVEVDKEAVDVLIENLGEFKG-KFKVFIGDVSEF----------  106 (201)
T ss_dssp             TTSSTTCEEEEETCTTCHHHH----HHHHTTCSEEEEEESCHHHHHHHHHHTGGGTT-SEEEEESCGGGC----------
T ss_pred             cCCCCCCEEEECcCcchHHHH----HHHHcCCCEEEEEcCcHHHHHHHHHHHHHcCC-CceEEECchhhh----------
Confidence            35899999998888755 443    3456786 899999998888877777766554 788888887442          


Q ss_pred             HhHcCCccEEEEccccCC
Q 044010          120 MNHFGRLDHLVNNAGISS  137 (248)
Q Consensus       120 ~~~~g~id~vv~~ag~~~  137 (248)
                         .+++|++|.|..+..
T Consensus       107 ---~~~fD~Vi~nPP~~~  121 (201)
T d1wy7a1         107 ---NSRVDIVIMNPPFGS  121 (201)
T ss_dssp             ---CCCCSEEEECCCCSS
T ss_pred             ---CCcCcEEEEcCcccc
Confidence               358999999987643

>d1j4aa1 c.2.1.4 (A:104-300) D-lactate dehydrogenase {Lactobacillus helveticus [TaxId: 1587]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Formate/glycerate dehydrogenases, NAD-domain
domain: D-lactate dehydrogenase
species: Lactobacillus helveticus [TaxId: 1587]

Probab=95.29  E-value=0.1  Score=39.15  Aligned_cols=39  Identities=21%  Similarity=0.198  Sum_probs=34.5

Q ss_pred             cCCCCCEEEEcCCCChHHHHHHHHHHHcCCeEEEEeCCcc
Q 044010           43 EDVSGKVVIITGASSGIGEHLAYEYARRGACLALCARREK   82 (248)
Q Consensus        43 ~~~~~k~~lVtGg~~gIG~aia~~l~~~G~~V~l~~r~~~   82 (248)
                      .++.||++.|.|- |.||+.+|+.+...|++|+..++...
T Consensus        39 ~el~gk~vgIiG~-G~IG~~va~~l~~fg~~V~~~d~~~~   77 (197)
T d1j4aa1          39 REVRDQVVGVVGT-GHIGQVFMQIMEGFGAKVITYDIFRN   77 (197)
T ss_dssp             CCGGGSEEEEECC-SHHHHHHHHHHHHTTCEEEEECSSCC
T ss_pred             ccccCCeEEEecc-cccchhHHHhHhhhcccccccCcccc
Confidence            4689999999976 89999999999999999999887654

>d2fr1a2 c.2.1.2 (A:1448-1656) Erythromycin synthase, eryAI, 1st ketoreductase module {Saccharopolyspora erythraea [TaxId: 1836]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Erythromycin synthase, eryAI, 1st ketoreductase module
species: Saccharopolyspora erythraea [TaxId: 1836]

Probab=95.20  E-value=0.39  Score=35.66  Aligned_cols=144  Identities=14%  Similarity=0.069  Sum_probs=79.7

Q ss_pred             CCCCEEEEcCCC--ChHHHHHHHHHHHcCCeEEEEeCCcchHHHHHHHHHhhCCCcEEEEEccCCCHHHHHHHHHHHHhH
Q 044010           45 VSGKVVIITGAS--SGIGEHLAYEYARRGACLALCARREKSLEEVADTAREIGSPDVITIRADVSKVDDCRSLVEETMNH  122 (248)
Q Consensus        45 ~~~k~~lVtGg~--~gIG~aia~~l~~~G~~V~l~~r~~~~~~~~~~~l~~~~~~~v~~~~~D~~~~~~~~~~~~~~~~~  122 (248)
                      ..|+++++...+  ...+.+++..|..+|..+..+.-+..                        .+.+   .+.+. ...
T Consensus        23 ~~g~~lv~~~~~~~~~~~~~l~~~l~~~g~~~~~~~~~~~------------------------~~~~---~l~~~-~~~   74 (209)
T d2fr1a2          23 LDGTWLVAKYAGTADETSTAAREALESAGARVRELVVDAR------------------------CGRD---ELAER-LRS   74 (209)
T ss_dssp             CCSEEEEEECTTSSHHHHHHHHHHHHTTSCEEEEEECCTT------------------------CCHH---HHHHH-HTT
T ss_pred             CCCcEEEEeCCCCchHHHHHHHHHHHhCCCeEEEecCCCc------------------------cCHH---HHHHH-hhc
Confidence            456666655332  34777788888888887766544321                        1122   22222 244


Q ss_pred             cCCccEEEEccccCCcccccccCChHHHHHHHHhhhHHHHHHHHHHhhhhhhcCCeEEEEcCccccccCCCCccchHHHH
Q 044010          123 FGRLDHLVNNAGISSVALFEDIVNITDFKQIMNINFWGSVYTTRFAVPHLRYTKGKIVVLSSAASWLTAPRMSFYNASKA  202 (248)
Q Consensus       123 ~g~id~vv~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~g~iV~isS~~~~~~~~~~~~Y~~sKa  202 (248)
                      .+.++.+|+..+.........    +..    ...+.+.+.++|.+...  ....++.+++..+.... +.-..-....+
T Consensus        75 ~~~~~~vv~l~~~~~~~~~~~----~~~----~~~~~~~l~l~qal~~~--~~~~~l~~vT~~a~~~~-~~d~~~~p~~A  143 (209)
T d2fr1a2          75 VGEVAGVLSLLAVDEAEPEEA----PLA----LASLADTLSLVQAMVSA--ELGCPLWTVTESAVATG-PFERVRNAAHG  143 (209)
T ss_dssp             SCCCSEEEECTTTTCCCCSSC----GGG----CHHHHHHHHHHHHHHHT--TCCCCEEEEEESCSCSS-TTSCCSCGGGH
T ss_pred             cCCCCeEEEeCCCCCCCCcch----hHH----HHHHHHHHHHHHHHHhC--CCCCcEEEEEcCCcccC-CCcccCCHhHH
Confidence            567899999877543322111    111    11244556666765432  12356777765432222 22234467889


Q ss_pred             HHHHHHHHHHHHhCCC-eEEEEEecC
Q 044010          203 ALVLFFETLRVELGSD-VGVTIVTPG  227 (248)
Q Consensus       203 al~~l~~~la~~~~~~-i~v~~v~pg  227 (248)
                      ++.+|+++++.|+..- +++..+.+.
T Consensus       144 ~l~Gl~r~~~~E~P~l~~~~vDl~~~  169 (209)
T d2fr1a2         144 ALWGVGRVIALENPAVWGGLVDVPAG  169 (209)
T ss_dssp             HHHHHHHHHHHHCGGGEEEEEEECTT
T ss_pred             hHHHHHHHHHHhCCCceEEEEECCCC
Confidence            9999999999998432 444455433

>d1pjza_ c.66.1.36 (A:) Thiopurine S-methyltransferase {Pseudomonas syringae [TaxId: 317]}

class: Alpha and beta proteins (a/b)
fold: S-adenosyl-L-methionine-dependent methyltransferases
superfamily: S-adenosyl-L-methionine-dependent methyltransferases
family: Thiopurine S-methyltransferase
domain: Thiopurine S-methyltransferase
species: Pseudomonas syringae [TaxId: 317]

Probab=95.16  E-value=0.17  Score=36.74  Aligned_cols=79  Identities=14%  Similarity=0.107  Sum_probs=55.0

Q ss_pred             CCCCCEEEEcCCCChHHHHHHHHHHHcCCeEEEEeCCcchHHHHHHHHHhhC------------CCcEEEEEccCCCHHH
Q 044010           44 DVSGKVVIITGASSGIGEHLAYEYARRGACLALCARREKSLEEVADTAREIG------------SPDVITIRADVSKVDD  111 (248)
Q Consensus        44 ~~~~k~~lVtGg~~gIG~aia~~l~~~G~~V~l~~r~~~~~~~~~~~l~~~~------------~~~v~~~~~D~~~~~~  111 (248)
                      -.+|++||..|++.|   ..+..|+++|++|..++.++...+.+.+..++..            .....++.+|..+...
T Consensus        18 ~~~~~rvLd~GCG~G---~~a~~la~~G~~V~gvD~S~~~i~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~l~~   94 (201)
T d1pjza_          18 VVPGARVLVPLCGKS---QDMSWLSGQGYHVVGAELSEAAVERYFTERGEQPHITSQGDFKVYAAPGIEIWCGDFFALTA   94 (201)
T ss_dssp             CCTTCEEEETTTCCS---HHHHHHHHHCCEEEEEEECHHHHHHHHHHHCSCSEEEEETTEEEEECSSSEEEEECCSSSTH
T ss_pred             CCCCCEEEEecCcCC---HHHHHHHHcCCceEeecccHHHHHHHHHHhccccchhhhhhhhhccccccceeccccccccc
Confidence            347889999999877   3666889999999999999988887777664432            1234677777776543


Q ss_pred             HHHHHHHHHhHcCCccEEEEccc
Q 044010          112 CRSLVEETMNHFGRLDHLVNNAG  134 (248)
Q Consensus       112 ~~~~~~~~~~~~g~id~vv~~ag  134 (248)
                      ..         ....|.++....
T Consensus        95 ~~---------~~~~D~i~~~~~  108 (201)
T d1pjza_          95 RD---------IGHCAAFYDRAA  108 (201)
T ss_dssp             HH---------HHSEEEEEEESC
T ss_pred             cc---------ccceeEEEEEee
Confidence            21         125777766443

>d2naca1 c.2.1.4 (A:148-335) Formate dehydrogenase {Pseudomonas sp., strain 101 [TaxId: 306]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Formate/glycerate dehydrogenases, NAD-domain
domain: Formate dehydrogenase
species: Pseudomonas sp., strain 101 [TaxId: 306]

Probab=95.05  E-value=0.14  Score=38.01  Aligned_cols=67  Identities=18%  Similarity=0.116  Sum_probs=46.2

Q ss_pred             ccCCCCCEEEEcCCCChHHHHHHHHHHHcCCeEEEEeCCcchHHHHHH-------HHHh-hCCCcEEEEEccCCCH
Q 044010           42 SEDVSGKVVIITGASSGIGEHLAYEYARRGACLALCARREKSLEEVAD-------TARE-IGSPDVITIRADVSKV  109 (248)
Q Consensus        42 ~~~~~~k~~lVtGg~~gIG~aia~~l~~~G~~V~l~~r~~~~~~~~~~-------~l~~-~~~~~v~~~~~D~~~~  109 (248)
                      ..+++++++.|.|. |.||.++++.|...|.+|...++.........+       .+.+ ....++..+.+.+++.
T Consensus        39 ~~~l~~~~vgiiG~-G~IG~~va~~l~~fg~~v~~~d~~~~~~~~~~~~~~~~~~~l~~~l~~sD~v~~~~plt~~  113 (188)
T d2naca1          39 AYDLEAMHVGTVAA-GRIGLAVLRRLAPFDVHLHYTDRHRLPESVEKELNLTWHATREDMYPVCDVVTLNCPLHPE  113 (188)
T ss_dssp             CCCCTTCEEEEECC-SHHHHHHHHHHGGGTCEEEEECSSCCCHHHHHHHTCEECSSHHHHGGGCSEEEECSCCCTT
T ss_pred             ceeccccceeeccc-cccchhhhhhhhccCceEEEEeeccccccccccccccccCCHHHHHHhccchhhccccccc
Confidence            34689999999975 899999999999999999999986533222211       0111 1123567777777764

>d1ne2a_ c.66.1.32 (A:) Hypothetical protein Ta1320 {Archaeon Thermoplasma acidophilum [TaxId: 2303]}

class: Alpha and beta proteins (a/b)
fold: S-adenosyl-L-methionine-dependent methyltransferases
superfamily: S-adenosyl-L-methionine-dependent methyltransferases
family: Ta1320-like
domain: Hypothetical protein Ta1320
species: Archaeon Thermoplasma acidophilum [TaxId: 2303]

Probab=95.01  E-value=0.019  Score=43.44  Aligned_cols=73  Identities=26%  Similarity=0.352  Sum_probs=52.4

Q ss_pred             cCCCCCEEEEcCCCChHHHHHHHHHHHcCC-eEEEEeCCcchHHHHHHHHHhhCCCcEEEEEccCCCHHHHHHHHHHHHh
Q 044010           43 EDVSGKVVIITGASSGIGEHLAYEYARRGA-CLALCARREKSLEEVADTAREIGSPDVITIRADVSKVDDCRSLVEETMN  121 (248)
Q Consensus        43 ~~~~~k~~lVtGg~~gIG~aia~~l~~~G~-~V~l~~r~~~~~~~~~~~l~~~~~~~v~~~~~D~~~~~~~~~~~~~~~~  121 (248)
                      .++.||++|=.|++.|+   ++..++..|+ +|+.++.+++..+.+.+.+     ..+.++.+|+.+.            
T Consensus        45 ~dl~Gk~VLDlGcGtG~---l~i~a~~~ga~~V~~vDid~~a~~~ar~N~-----~~~~~~~~D~~~l------------  104 (197)
T d1ne2a_          45 GNIGGRSVIDAGTGNGI---LACGSYLLGAESVTAFDIDPDAIETAKRNC-----GGVNFMVADVSEI------------  104 (197)
T ss_dssp             TSSBTSEEEEETCTTCH---HHHHHHHTTBSEEEEEESCHHHHHHHHHHC-----TTSEEEECCGGGC------------
T ss_pred             CCCCCCEEEEeCCCCcH---HHHHHHHcCCCcccccccCHHHHHHHHHcc-----ccccEEEEehhhc------------
Confidence            58999999999998773   2334667786 6999998876555444332     2678899998542            


Q ss_pred             HcCCccEEEEccccC
Q 044010          122 HFGRLDHLVNNAGIS  136 (248)
Q Consensus       122 ~~g~id~vv~~ag~~  136 (248)
                       -+++|++|.|..+.
T Consensus       105 -~~~fD~Vi~NPPfg  118 (197)
T d1ne2a_         105 -SGKYDTWIMNPPFG  118 (197)
T ss_dssp             -CCCEEEEEECCCC-
T ss_pred             -CCcceEEEeCcccc
Confidence             25899999997654

>d1yovb1 c.111.1.2 (B:12-437) UBA3 {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: Activating enzymes of the ubiquitin-like proteins
superfamily: Activating enzymes of the ubiquitin-like proteins
family: Ubiquitin activating enzymes (UBA)
domain: UBA3
species: Human (Homo sapiens) [TaxId: 9606]

Probab=95.00  E-value=0.011  Score=50.19  Aligned_cols=62  Identities=18%  Similarity=0.192  Sum_probs=44.3

Q ss_pred             CCCCEEEEcCCCChHHHHHHHHHHHcCC-eEEEEeCCc-------------------chHHHHHHHHHhhCC-CcEEEEE
Q 044010           45 VSGKVVIITGASSGIGEHLAYEYARRGA-CLALCARRE-------------------KSLEEVADTAREIGS-PDVITIR  103 (248)
Q Consensus        45 ~~~k~~lVtGg~~gIG~aia~~l~~~G~-~V~l~~r~~-------------------~~~~~~~~~l~~~~~-~~v~~~~  103 (248)
                      +++.++||.|+ ||+|..+++.|+..|. ++.++|.+.                   .+.+.+.+.+++..+ .++..+.
T Consensus        35 l~~~kVlvvG~-GglG~ei~k~L~~~Gvg~i~lvD~D~Ve~sNL~RQflf~~~diG~~Ka~~a~~~l~~~np~v~i~~~~  113 (426)
T d1yovb1          35 LDTCKVLVIGA-GGLGCELLKNLALSGFRQIHVIDMDTIDVSNLNRQFLFRPKDIGRPKAEVAAEFLNDRVPNCNVVPHF  113 (426)
T ss_dssp             HHHCCEEEECS-STTHHHHHHHHHTTTCCCEEEECCCBCCGGGGGTCTTCCGGGTTSBHHHHHHHHHHHHSTTCCCEEEC
T ss_pred             HhcCeEEEECC-CHHHHHHHHHHHHcCCCeEEEEECCCcchhhhcccccCChhHcCcHHHHHHHHHHHhhCCCCceEeee
Confidence            45678999988 8899999999999998 899998753                   255666666666543 2344444


Q ss_pred             ccCC
Q 044010          104 ADVS  107 (248)
Q Consensus       104 ~D~~  107 (248)
                      .++.
T Consensus       114 ~~i~  117 (426)
T d1yovb1         114 NKIQ  117 (426)
T ss_dssp             SCGG
T ss_pred             cccc
Confidence            4443

>d2g5ca2 c.2.1.6 (A:30-200) Prephenate dehydrogenase TyrA {Aquifex aeolicus [TaxId: 63363]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: 6-phosphogluconate dehydrogenase-like, N-terminal domain
domain: Prephenate dehydrogenase TyrA
species: Aquifex aeolicus [TaxId: 63363]

Probab=94.99  E-value=0.16  Score=36.62  Aligned_cols=83  Identities=18%  Similarity=0.202  Sum_probs=52.1

Q ss_pred             EEEEcCCCChHHHHHHHHHHHcCC--eEEEEeCCcchHHHHHHHHHh-----------hCCCcEEEEEccCCCHHHHHHH
Q 044010           49 VVIITGASSGIGEHLAYEYARRGA--CLALCARREKSLEEVADTARE-----------IGSPDVITIRADVSKVDDCRSL  115 (248)
Q Consensus        49 ~~lVtGg~~gIG~aia~~l~~~G~--~V~l~~r~~~~~~~~~~~l~~-----------~~~~~v~~~~~D~~~~~~~~~~  115 (248)
                      +++|.|. |-+|.++|+.|.+.|+  +|...+++++..+.+.+.-.-           ....++.++   .+..+++.+.
T Consensus         3 ~I~IIG~-G~mG~sla~~L~~~g~~~~I~~~D~~~~~~~~a~~~~~~~~~~~~~~~~~~~~~dlIil---a~p~~~~~~v   78 (171)
T d2g5ca2           3 NVLIVGV-GFMGGSFAKSLRRSGFKGKIYGYDINPESISKAVDLGIIDEGTTSIAKVEDFSPDFVML---SSPVRTFREI   78 (171)
T ss_dssp             EEEEESC-SHHHHHHHHHHHHTTCCSEEEEECSCHHHHHHHHHTTSCSEEESCGGGGGGTCCSEEEE---CSCHHHHHHH
T ss_pred             EEEEEcc-CHHHHHHHHHHHhcCCCeEEEEEECChHHHHHHHHhhcchhhhhhhhhhhccccccccc---cCCchhhhhh
Confidence            5777865 9999999999999996  688888887766655432100           001122222   2235667788


Q ss_pred             HHHHHhHcCCccEEEEcccc
Q 044010          116 VEETMNHFGRLDHLVNNAGI  135 (248)
Q Consensus       116 ~~~~~~~~g~id~vv~~ag~  135 (248)
                      ++++.+....=.+++..++.
T Consensus        79 l~~l~~~~~~~~ii~d~~s~   98 (171)
T d2g5ca2          79 AKKLSYILSEDATVTDQGSV   98 (171)
T ss_dssp             HHHHHHHSCTTCEEEECCSC
T ss_pred             hhhhhccccccccccccccc
Confidence            88877666555555555543

>d1mx3a1 c.2.1.4 (A:126-318) Transcription corepressor CtbP {Human (Homo sapiens), Ctbp1 [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Formate/glycerate dehydrogenases, NAD-domain
domain: Transcription corepressor CtbP
species: Human (Homo sapiens), Ctbp1 [TaxId: 9606]

Probab=94.98  E-value=0.079  Score=39.70  Aligned_cols=88  Identities=15%  Similarity=0.187  Sum_probs=55.0

Q ss_pred             cCCCCCEEEEcCCCChHHHHHHHHHHHcCCeEEEEeCCcchHHHH---------HHHHHhhCCCcEEEEEccCCCHHHHH
Q 044010           43 EDVSGKVVIITGASSGIGEHLAYEYARRGACLALCARREKSLEEV---------ADTAREIGSPDVITIRADVSKVDDCR  113 (248)
Q Consensus        43 ~~~~~k~~lVtGg~~gIG~aia~~l~~~G~~V~l~~r~~~~~~~~---------~~~l~~~~~~~v~~~~~D~~~~~~~~  113 (248)
                      .++.||++.|.|. |.||+.+|+.+...|++|+..++........         .+++-..  .++..+.+.+++...  
T Consensus        45 ~eL~gktvgIiG~-G~IG~~va~~l~~fg~~v~~~d~~~~~~~~~~~~~~~~~~l~~ll~~--sD~i~~~~plt~~T~--  119 (193)
T d1mx3a1          45 ARIRGETLGIIGL-GRVGQAVALRAKAFGFNVLFYDPYLSDGVERALGLQRVSTLQDLLFH--SDCVTLHCGLNEHNH--  119 (193)
T ss_dssp             CCCTTCEEEEECC-SHHHHHHHHHHHTTTCEEEEECTTSCTTHHHHHTCEECSSHHHHHHH--CSEEEECCCCCTTCT--
T ss_pred             eeeeCceEEEecc-ccccccceeeeeccccceeeccCcccccchhhhccccccchhhcccc--CCEEEEeecccccch--
Confidence            4689999999966 8999999999999999999998864432111         1122111  256777777776532  


Q ss_pred             HHHHH-HHhHcCCccEEEEccccC
Q 044010          114 SLVEE-TMNHFGRLDHLVNNAGIS  136 (248)
Q Consensus       114 ~~~~~-~~~~~g~id~vv~~ag~~  136 (248)
                      .+++. ..+. -+.+.++-|+|..
T Consensus       120 ~li~~~~l~~-mk~~a~lIN~sRG  142 (193)
T d1mx3a1         120 HLINDFTVKQ-MRQGAFLVNTARG  142 (193)
T ss_dssp             TSBSHHHHTT-SCTTEEEEECSCT
T ss_pred             hhhhHHHHhc-cCCCCeEEecCCc
Confidence            11111 0111 1456666666654

>d1edza1 c.2.1.7 (A:149-319) Methylenetetrahydrofolate dehydrogenase/cyclohydrolase {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Aminoacid dehydrogenase-like, C-terminal domain
domain: Methylenetetrahydrofolate dehydrogenase/cyclohydrolase
species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]

Probab=94.95  E-value=0.054  Score=39.88  Aligned_cols=39  Identities=26%  Similarity=0.262  Sum_probs=35.4

Q ss_pred             cCCCCCEEEEcCCCChHHHHHHHHHHHcCCeEEEEeCCc
Q 044010           43 EDVSGKVVIITGASSGIGEHLAYEYARRGACLALCARRE   81 (248)
Q Consensus        43 ~~~~~k~~lVtGg~~gIG~aia~~l~~~G~~V~l~~r~~   81 (248)
                      .+++||+++|.|-|.=+|+.++..|+++|+.|..+..+.
T Consensus        25 ~~l~GK~vvVIGrS~iVG~Pla~lL~~~gaTVt~~~~~~   63 (171)
T d1edza1          25 NRLYGKKCIVINRSEIVGRPLAALLANDGATVYSVDVNN   63 (171)
T ss_dssp             CTTTTCEEEEECCCTTTHHHHHHHHHTTSCEEEEECSSE
T ss_pred             CCCCCCEEEEECCccccHHHHHHHHHHCCCEEEEecccc
Confidence            489999999999999999999999999999998887643

>d3cuma2 c.2.1.6 (A:1-162) Hydroxyisobutyrate dehydrogenase {Pseudomonas aeruginosa [TaxId: 287]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: 6-phosphogluconate dehydrogenase-like, N-terminal domain
domain: Hydroxyisobutyrate dehydrogenase
species: Pseudomonas aeruginosa [TaxId: 287]

Probab=94.94  E-value=0.051  Score=39.35  Aligned_cols=68  Identities=7%  Similarity=0.127  Sum_probs=43.8

Q ss_pred             EEEcCCCChHHHHHHHHHHHcCCeEEEEeCCcchHHHHHHHHHhhCC------CcEEEEEccCCCHHHHHHHHHH
Q 044010           50 VIITGASSGIGEHLAYEYARRGACLALCARREKSLEEVADTAREIGS------PDVITIRADVSKVDDCRSLVEE  118 (248)
Q Consensus        50 ~lVtGg~~gIG~aia~~l~~~G~~V~l~~r~~~~~~~~~~~l~~~~~------~~v~~~~~D~~~~~~~~~~~~~  118 (248)
                      +-+. |.|-+|.++|++|+++|++|.+-+|+.++.+...+.-.....      .....+..-+.+.+.+++++..
T Consensus         4 Ig~I-GlG~MG~~iA~~L~~~g~~v~~~d~~~~~~~~~~~~~~~~~~~~~e~~~~~diii~~v~~~~~~~~v~~~   77 (162)
T d3cuma2           4 IAFI-GLGHMGAPMATNLLKAGYLLNVFDLVQSAVDGLVAAGASAARSARDAVQGADVVISMLPASQHVEGLYLD   77 (162)
T ss_dssp             EEEE-CCSTTHHHHHHHHHHTTCEEEEECSSHHHHHHHHHTTCEECSSHHHHHTSCSEEEECCSCHHHHHHHHHS
T ss_pred             EEEE-EEHHHHHHHHHHHHHCCCeEEEEECchhhhhhhhhhhccccchhhhhccccCeeeecccchhhHHHHHhc
Confidence            4445 569999999999999999999999998766654422111000      1233444455666666666543

>d1kjqa2 c.30.1.1 (A:2-112) Glycinamide ribonucleotide transformylase PurT, N-domain {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: PreATP-grasp domain
superfamily: PreATP-grasp domain
family: BC N-terminal domain-like
domain: Glycinamide ribonucleotide transformylase PurT, N-domain
species: Escherichia coli [TaxId: 562]

Probab=94.90  E-value=0.09  Score=35.68  Aligned_cols=73  Identities=18%  Similarity=0.222  Sum_probs=54.5

Q ss_pred             CCCCEEEEcCCCChHHHHHHHHHHHcCCeEEEEeCCcchHHHHHHHHHhhCCCcEEEEEccCCCHHHHHHHHHHHHhHcC
Q 044010           45 VSGKVVIITGASSGIGEHLAYEYARRGACLALCARREKSLEEVADTAREIGSPDVITIRADVSKVDDCRSLVEETMNHFG  124 (248)
Q Consensus        45 ~~~k~~lVtGg~~gIG~aia~~l~~~G~~V~l~~r~~~~~~~~~~~l~~~~~~~v~~~~~D~~~~~~~~~~~~~~~~~~g  124 (248)
                      ..+.++.|.|| |=+|+-++....+.|+++++.+.+++....      +.   .-.++..|..|.+.+.++....     
T Consensus         9 ~~~~kigIlGg-GQL~rMla~aA~~lG~~v~v~d~~~~~PA~------~v---a~~~i~~~~~d~~~l~~~~~~~-----   73 (111)
T d1kjqa2           9 PAATRVMLLGS-GELGKEVAIECQRLGVEVIAVDRYADAPAM------HV---AHRSHVINMLDGDALRRVVELE-----   73 (111)
T ss_dssp             TTCCEEEEESC-SHHHHHHHHHHHTTTCEEEEEESSTTCGGG------GG---SSEEEECCTTCHHHHHHHHHHH-----
T ss_pred             CCCCEEEEEeC-CHHHHHHHHHHHHCCCEEEEEcCCCCCchh------hc---CCeEEECCCCCHHHHHHHHHhh-----
Confidence            34567999985 789999999988899999999987653111      00   1256789999999999888764     


Q ss_pred             CccEEEEc
Q 044010          125 RLDHLVNN  132 (248)
Q Consensus       125 ~id~vv~~  132 (248)
                      ++|++-.-
T Consensus        74 ~~DviT~E   81 (111)
T d1kjqa2          74 KPHYIVPE   81 (111)
T ss_dssp             CCSEEEEC
T ss_pred             CCceEEEE
Confidence            68888443

>d1ks9a2 c.2.1.6 (A:1-167) Ketopantoate reductase PanE {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: 6-phosphogluconate dehydrogenase-like, N-terminal domain
domain: Ketopantoate reductase PanE
species: Escherichia coli [TaxId: 562]

Probab=94.82  E-value=0.018  Score=41.59  Aligned_cols=34  Identities=12%  Similarity=0.223  Sum_probs=30.6

Q ss_pred             EEEEcCCCChHHHHHHHHHHHcCCeEEEEeCCcch
Q 044010           49 VVIITGASSGIGEHLAYEYARRGACLALCARREKS   83 (248)
Q Consensus        49 ~~lVtGg~~gIG~aia~~l~~~G~~V~l~~r~~~~   83 (248)
                      ++.|.|+ |.+|..++..|++.|++|.+.+|++.+
T Consensus         2 kI~IiGa-G~iG~~~a~~L~~~G~~V~~~~r~~~~   35 (167)
T d1ks9a2           2 KITVLGC-GALGQLWLTALCKQGHEVQGWLRVPQP   35 (167)
T ss_dssp             EEEEECC-SHHHHHHHHHHHHTTCEEEEECSSCCS
T ss_pred             EEEEECc-CHHHHHHHHHHHHCCCceEEEEcCHHH
Confidence            5778877 999999999999999999999998754

>d1y8ca_ c.66.1.43 (A:) Putative methyltransferase CAC2371 {Clostridium acetobutylicum [TaxId: 1488]}

class: Alpha and beta proteins (a/b)
fold: S-adenosyl-L-methionine-dependent methyltransferases
superfamily: S-adenosyl-L-methionine-dependent methyltransferases
family: CAC2371-like
domain: Putative methyltransferase CAC2371
species: Clostridium acetobutylicum [TaxId: 1488]

Probab=94.79  E-value=0.062  Score=41.39  Aligned_cols=77  Identities=12%  Similarity=0.051  Sum_probs=59.3

Q ss_pred             cCCCCCEEEEcCCCChHHHHHHHHHHHcCCeEEEEeCCcchHHHHHHHHHhhCCCcEEEEEccCCCHHHHHHHHHHHHhH
Q 044010           43 EDVSGKVVIITGASSGIGEHLAYEYARRGACLALCARREKSLEEVADTAREIGSPDVITIRADVSKVDDCRSLVEETMNH  122 (248)
Q Consensus        43 ~~~~~k~~lVtGg~~gIG~aia~~l~~~G~~V~l~~r~~~~~~~~~~~l~~~~~~~v~~~~~D~~~~~~~~~~~~~~~~~  122 (248)
                      ...+++++|=.|++.|.   ++..|+++|.+|+.++.+++.++.+.+..++.+. .+.++..|+.+.+           .
T Consensus        34 ~~~~~~~vLDiGCG~G~---~~~~l~~~g~~v~GvD~S~~ml~~A~~~~~~~~~-~v~~~~~d~~~~~-----------~   98 (246)
T d1y8ca_          34 NNLVFDDYLDLACGTGN---LTENLCPKFKNTWAVDLSQEMLSEAENKFRSQGL-KPRLACQDISNLN-----------I   98 (246)
T ss_dssp             TTCCTTEEEEETCTTST---THHHHGGGSSEEEEECSCHHHHHHHHHHHHHTTC-CCEEECCCGGGCC-----------C
T ss_pred             hCCCCCeEEEEeCcCCH---HHHHHHHhCCccEeeccchhhhhhccccccccCc-cceeeccchhhhc-----------c
Confidence            45678899999998775   6778888999999999999888887777766554 6888888886542           1


Q ss_pred             cCCccEEEEccc
Q 044010          123 FGRLDHLVNNAG  134 (248)
Q Consensus       123 ~g~id~vv~~ag  134 (248)
                      .+++|+++...+
T Consensus        99 ~~~fD~i~~~~~  110 (246)
T d1y8ca_          99 NRKFDLITCCLD  110 (246)
T ss_dssp             SCCEEEEEECTT
T ss_pred             cccccccceeee
Confidence            247999886543

>d1ebda2 c.3.1.5 (A:155-271) Dihydrolipoamide dehydrogenase {Bacillus stearothermophilus [TaxId: 1422]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: FAD/NAD-linked reductases, N-terminal and central domains
domain: Dihydrolipoamide dehydrogenase
species: Bacillus stearothermophilus [TaxId: 1422]

Probab=94.72  E-value=0.056  Score=36.81  Aligned_cols=35  Identities=23%  Similarity=0.350  Sum_probs=30.7

Q ss_pred             CCEEEEcCCCChHHHHHHHHHHHcCCeEEEEeCCcc
Q 044010           47 GKVVIITGASSGIGEHLAYEYARRGACLALCARREK   82 (248)
Q Consensus        47 ~k~~lVtGg~~gIG~aia~~l~~~G~~V~l~~r~~~   82 (248)
                      .|+++|.|| |.+|..+|..|++.|.+|.++.|.+.
T Consensus        22 p~~v~IiGg-G~ig~E~A~~l~~~G~~Vtlve~~~~   56 (117)
T d1ebda2          22 PKSLVVIGG-GYIGIELGTAYANFGTKVTILEGAGE   56 (117)
T ss_dssp             CSEEEEECC-SHHHHHHHHHHHHTTCEEEEEESSSS
T ss_pred             CCeEEEECC-CccceeeeeeecccccEEEEEEecce
Confidence            367888877 89999999999999999999988664

>d1pgja2 c.2.1.6 (A:1-178) 6-phosphogluconate dehydrogenase {Trypanosoma brucei [TaxId: 5691]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: 6-phosphogluconate dehydrogenase-like, N-terminal domain
domain: 6-phosphogluconate dehydrogenase
species: Trypanosoma brucei [TaxId: 5691]

Probab=94.62  E-value=0.082  Score=38.67  Aligned_cols=36  Identities=25%  Similarity=0.297  Sum_probs=32.1

Q ss_pred             CCChHHHHHHHHHHHcCCeEEEEeCCcchHHHHHHH
Q 044010           55 ASSGIGEHLAYEYARRGACLALCARREKSLEEVADT   90 (248)
Q Consensus        55 g~~gIG~aia~~l~~~G~~V~l~~r~~~~~~~~~~~   90 (248)
                      |.|-+|.++|++|++.|++|.+-+|++++.++..++
T Consensus         8 GlG~MG~~ma~~L~~~G~~V~~~dr~~~~~~~l~~~   43 (178)
T d1pgja2           8 GLGVMGANLALNIAEKGFKVAVFNRTYSKSEEFMKA   43 (178)
T ss_dssp             CCSHHHHHHHHHHHHTTCCEEEECSSHHHHHHHHHH
T ss_pred             eehHHHHHHHHHHHHCCCeEEEEECCHHHHHHHHHc
Confidence            568999999999999999999999999887777654

>d1yl7a1 c.2.1.3 (A:2-105,A:215-245) Dihydrodipicolinate reductase {Mycobacterium tuberculosis [TaxId: 1773]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Glyceraldehyde-3-phosphate dehydrogenase-like, N-terminal domain
domain: Dihydrodipicolinate reductase
species: Mycobacterium tuberculosis [TaxId: 1773]

Probab=94.59  E-value=0.12  Score=36.35  Aligned_cols=76  Identities=16%  Similarity=0.209  Sum_probs=53.0

Q ss_pred             EEEEcCCCChHHHHHHHHHHHc-CCeEEEE-eCCcchHHHHHHHHHhhCCCcEEEEEccCCCHHHHHHHHHHHHhHcCCc
Q 044010           49 VVIITGASSGIGEHLAYEYARR-GACLALC-ARREKSLEEVADTAREIGSPDVITIRADVSKVDDCRSLVEETMNHFGRL  126 (248)
Q Consensus        49 ~~lVtGg~~gIG~aia~~l~~~-G~~V~l~-~r~~~~~~~~~~~l~~~~~~~v~~~~~D~~~~~~~~~~~~~~~~~~g~i  126 (248)
                      ++.|.|++|-+|+++++...++ +++++.. ++.. ...    .+..... +   +..|++.++...+.++.+.+.  ++
T Consensus         1 kI~v~Ga~GrMG~~i~~~i~~~~~~~l~~~~d~~~-~~~----~~~~~~~-D---vvIDFS~p~~~~~~~~~~~~~--~~   69 (135)
T d1yl7a1           1 RVGVLGAKGKVGATMVRAVAAADDLTLSAELDAGD-PLS----LLTDGNT-E---VVIDFTHPDVVMGNLEFLIDN--GI   69 (135)
T ss_dssp             EEEEETTTSHHHHHHHHHHHHSTTSEEEEEECTTC-CTH----HHHTTTC-S---EEEECCCTTTHHHHHHHHHHT--TC
T ss_pred             CEEEECCCCHHHHHHHHHHHhCCCCEEEEEEecCC-chh----hhccccC-C---EEEEcccHHHHHHHHHHHHhc--CC
Confidence            4789999999999999988775 5665443 3332 222    1222221 2   678999999999999988765  57


Q ss_pred             cEEEEcccc
Q 044010          127 DHLVNNAGI  135 (248)
Q Consensus       127 d~vv~~ag~  135 (248)
                      .+|+-+.|.
T Consensus        70 ~~ViGTTG~   78 (135)
T d1yl7a1          70 HAVVGTTGF   78 (135)
T ss_dssp             EEEECCCCC
T ss_pred             CEEEecccc
Confidence            778777665

>d1nv8a_ c.66.1.30 (A:) N5-glutamine methyltransferase, HemK {Thermotoga maritima [TaxId: 2336]}

class: Alpha and beta proteins (a/b)
fold: S-adenosyl-L-methionine-dependent methyltransferases
superfamily: S-adenosyl-L-methionine-dependent methyltransferases
family: N5-glutamine methyltransferase, HemK
domain: N5-glutamine methyltransferase, HemK
species: Thermotoga maritima [TaxId: 2336]

Probab=94.59  E-value=0.13  Score=40.63  Aligned_cols=81  Identities=16%  Similarity=0.169  Sum_probs=55.4

Q ss_pred             CCEEEEcCCC-ChHHHHHHHHHHHcCCeEEEEeCCcchHHHHHHHHHhhCC-CcEEEEEccCCCHHHHHHHHHHHHhHcC
Q 044010           47 GKVVIITGAS-SGIGEHLAYEYARRGACLALCARREKSLEEVADTAREIGS-PDVITIRADVSKVDDCRSLVEETMNHFG  124 (248)
Q Consensus        47 ~k~~lVtGg~-~gIG~aia~~l~~~G~~V~l~~r~~~~~~~~~~~l~~~~~-~~v~~~~~D~~~~~~~~~~~~~~~~~~g  124 (248)
                      .++++-.|++ |.|+.++++   ...++|+.++.+++..+-+.+..+..+- .++.+...|+.+.         ..+..+
T Consensus       111 ~~~vld~g~GsG~i~~~la~---~~~~~v~a~Dis~~Al~~A~~Na~~~~~~~~~~i~~~~~~~~---------~~~~~~  178 (271)
T d1nv8a_         111 IKTVADIGTGSGAIGVSVAK---FSDAIVFATDVSSKAVEIARKNAERHGVSDRFFVRKGEFLEP---------FKEKFA  178 (271)
T ss_dssp             CCEEEEESCTTSHHHHHHHH---HSSCEEEEEESCHHHHHHHHHHHHHTTCTTSEEEEESSTTGG---------GGGGTT
T ss_pred             ccEEEEeeeeeehhhhhhhh---cccceeeechhhhhHHHHHHHHHHHcCCCceeEEeecccccc---------cccccC
Confidence            3455544444 446655543   2467999999999888888888776553 3567788888644         223457


Q ss_pred             CccEEEEccccCCcc
Q 044010          125 RLDHLVNNAGISSVA  139 (248)
Q Consensus       125 ~id~vv~~ag~~~~~  139 (248)
                      ++|++|.|..+.+..
T Consensus       179 ~fDlIVsNPPYI~~~  193 (271)
T d1nv8a_         179 SIEMILSNPPYVKSS  193 (271)
T ss_dssp             TCCEEEECCCCBCGG
T ss_pred             cccEEEEcccccCcc
Confidence            899999999877543

>d3lada2 c.3.1.5 (A:159-277) Dihydrolipoamide dehydrogenase {Azotobacter vinelandii [TaxId: 354]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: FAD/NAD-linked reductases, N-terminal and central domains
domain: Dihydrolipoamide dehydrogenase
species: Azotobacter vinelandii [TaxId: 354]

Probab=94.56  E-value=0.072  Score=36.45  Aligned_cols=35  Identities=26%  Similarity=0.264  Sum_probs=30.3

Q ss_pred             CCCEEEEcCCCChHHHHHHHHHHHcCCeEEEEeCCc
Q 044010           46 SGKVVIITGASSGIGEHLAYEYARRGACLALCARRE   81 (248)
Q Consensus        46 ~~k~~lVtGg~~gIG~aia~~l~~~G~~V~l~~r~~   81 (248)
                      ..|.++|.|| |-||..+|..|++.|.+|.++.|..
T Consensus        21 ~p~~i~IiG~-G~ig~E~A~~l~~~G~~Vtiv~~~~   55 (119)
T d3lada2          21 VPGKLGVIGA-GVIGLELGSVWARLGAEVTVLEAMD   55 (119)
T ss_dssp             CCSEEEEECC-SHHHHHHHHHHHHTTCEEEEEESSS
T ss_pred             CCCeEEEECC-ChHHHHHHHHHHHcCCceEEEEeec
Confidence            3467888876 8999999999999999999998865

>d1vm6a3 c.2.1.3 (A:1-96,A:183-214) Dihydrodipicolinate reductase {Thermotoga maritima [TaxId: 2336]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Glyceraldehyde-3-phosphate dehydrogenase-like, N-terminal domain
domain: Dihydrodipicolinate reductase
species: Thermotoga maritima [TaxId: 2336]

Probab=94.54  E-value=0.1  Score=36.29  Aligned_cols=73  Identities=21%  Similarity=0.281  Sum_probs=54.2

Q ss_pred             EEEEcCCCChHHHHHHHHHHHcCCeEEEE-eCCcchHHHHHHHHHhhCCCcEEEEEccCCCHHHHHHHHHHHHhHcCCcc
Q 044010           49 VVIITGASSGIGEHLAYEYARRGACLALC-ARREKSLEEVADTAREIGSPDVITIRADVSKVDDCRSLVEETMNHFGRLD  127 (248)
Q Consensus        49 ~~lVtGg~~gIG~aia~~l~~~G~~V~l~-~r~~~~~~~~~~~l~~~~~~~v~~~~~D~~~~~~~~~~~~~~~~~~g~id  127 (248)
                      ++.|.|++|-.|+++++.+.++|++++.. +++...         .....+   +..|++.++...+.++.+.+.  ++-
T Consensus         2 ki~i~G~~GrMG~~i~~~~~~~~~~l~~~id~~~~~---------~~~~~D---VvIDFS~p~~~~~~l~~~~~~--~~p   67 (128)
T d1vm6a3           2 KYGIVGYSGRMGQEIQKVFSEKGHELVLKVDVNGVE---------ELDSPD---VVIDFSSPEALPKTVDLCKKY--RAG   67 (128)
T ss_dssp             EEEEETTTSHHHHHHHHHHHHTTCEEEEEEETTEEE---------ECSCCS---EEEECSCGGGHHHHHHHHHHH--TCE
T ss_pred             EEEEECCCCHHHHHHHHHHhcCCCeEEEEECCCcHH---------HhccCC---EEEEecCHHHHHHHHHHHHhc--CCC
Confidence            47899999999999999888999976644 443221         001112   568999999999999998776  577


Q ss_pred             EEEEcccc
Q 044010          128 HLVNNAGI  135 (248)
Q Consensus       128 ~vv~~ag~  135 (248)
                      +|+-+.|.
T Consensus        68 ~ViGTTG~   75 (128)
T d1vm6a3          68 LVLGTTAL   75 (128)
T ss_dssp             EEECCCSC
T ss_pred             EEEEcCCC
Confidence            88777765

>d2as0a2 c.66.1.51 (A:73-396) Hypothetical protein PH1915, middle and C-terminal domains {Archaeon Pyrococcus horikoshii [TaxId: 53953]}

class: Alpha and beta proteins (a/b)
fold: S-adenosyl-L-methionine-dependent methyltransferases
superfamily: S-adenosyl-L-methionine-dependent methyltransferases
family: hypothetical RNA methyltransferase
domain: Hypothetical protein PH1915, middle and C-terminal domains
species: Archaeon Pyrococcus horikoshii [TaxId: 53953]

Probab=94.53  E-value=0.18  Score=40.79  Aligned_cols=116  Identities=16%  Similarity=0.115  Sum_probs=72.2

Q ss_pred             CCCEEEEcCCC-ChHHHHHHHHHHHcCC-eEEEEeCCcchHHHHHHHHHhhCC-CcEEEEEccCCCHHHHHHHHHHHHhH
Q 044010           46 SGKVVIITGAS-SGIGEHLAYEYARRGA-CLALCARREKSLEEVADTAREIGS-PDVITIRADVSKVDDCRSLVEETMNH  122 (248)
Q Consensus        46 ~~k~~lVtGg~-~gIG~aia~~l~~~G~-~V~l~~r~~~~~~~~~~~l~~~~~-~~v~~~~~D~~~~~~~~~~~~~~~~~  122 (248)
                      +|+++|=.|+. |+++.++    ++.|+ +|+.++.++...+.+.+.++..+- .++.++..|+.      +......++
T Consensus       145 ~g~~VLDl~~g~G~~si~~----a~~ga~~V~~vD~s~~al~~a~~N~~~ngl~~~~~~~~~d~~------~~~~~~~~~  214 (324)
T d2as0a2         145 PGDRVLDVFTYTGGFAIHA----AIAGADEVIGIDKSPRAIETAKENAKLNGVEDRMKFIVGSAF------EEMEKLQKK  214 (324)
T ss_dssp             TTCEEEETTCTTTHHHHHH----HHTTCSEEEEEESCHHHHHHHHHHHHHTTCGGGEEEEESCHH------HHHHHHHHT
T ss_pred             CCCeeecccCcccchhhhh----hhcCCcEEEeecCCHHHHHHHHHHHHHcCCCccceeeechhh------hhhHHHHhc
Confidence            47888877765 5666554    45676 899999999888888887776553 36778877763      223333344


Q ss_pred             cCCccEEEEccccCCcccccccCChHHHHHHHHhhhHHHHHHHHHHhhhhhhcCCeEEEEc
Q 044010          123 FGRLDHLVNNAGISSVALFEDIVNITDFKQIMNINFWGSVYTTRFAVPHLRYTKGKIVVLS  183 (248)
Q Consensus       123 ~g~id~vv~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~g~iV~is  183 (248)
                      ..++|.+|.+........       .+....    ......+++.+.+.++ .+|.++..|
T Consensus       215 ~~~fD~Vi~DpP~~~~~~-------~~~~~~----~~~y~~l~~~a~~ll~-pGG~lv~~s  263 (324)
T d2as0a2         215 GEKFDIVVLDPPAFVQHE-------KDLKAG----LRAYFNVNFAGLNLVK-DGGILVTCS  263 (324)
T ss_dssp             TCCEEEEEECCCCSCSSG-------GGHHHH----HHHHHHHHHHHHTTEE-EEEEEEEEE
T ss_pred             cCCCCchhcCCccccCCH-------HHHHHH----HHHHHHHHHHHHHHcC-CCcEEEEEe
Confidence            568999999976544321       111111    1123446666666664 456555544

>d1leha1 c.2.1.7 (A:135-364) Leucine dehydrogenase {Bacillus sphaericus [TaxId: 1421]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Aminoacid dehydrogenase-like, C-terminal domain
domain: Leucine dehydrogenase
species: Bacillus sphaericus [TaxId: 1421]

Probab=94.38  E-value=0.044  Score=42.40  Aligned_cols=48  Identities=17%  Similarity=0.305  Sum_probs=40.9

Q ss_pred             ccCCCCCEEEEcCCCChHHHHHHHHHHHcCCeEEEEeCCcchHHHHHHH
Q 044010           42 SEDVSGKVVIITGASSGIGEHLAYEYARRGACLALCARREKSLEEVADT   90 (248)
Q Consensus        42 ~~~~~~k~~lVtGg~~gIG~aia~~l~~~G~~V~l~~r~~~~~~~~~~~   90 (248)
                      ..+++||+++|-|- |.+|..+|+.|.+.|++|++.+.+....+...++
T Consensus        34 ~~~l~g~~v~IqG~-GnVG~~~a~~L~~~Gakvv~~d~~~~~~~~~~~~   81 (230)
T d1leha1          34 SDSLEGLAVSVQGL-GNVAKALCKKLNTEGAKLVVTDVNKAAVSAAVAE   81 (230)
T ss_dssp             SCCCTTCEEEEECC-SHHHHHHHHHHHHTTCEEEEECSCHHHHHHHHHH
T ss_pred             CCCCCCCEEEEECC-CHHHHHHHHHHHHCCCEEEeecccHHHHHHHHHh
Confidence            46799999999866 8999999999999999999999887766655543

>d1nhpa2 c.3.1.5 (A:120-242) NADH peroxidase {Enterococcus faecalis [TaxId: 1351]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: FAD/NAD-linked reductases, N-terminal and central domains
domain: NADH peroxidase
species: Enterococcus faecalis [TaxId: 1351]

Probab=94.37  E-value=0.043  Score=37.92  Aligned_cols=37  Identities=22%  Similarity=0.292  Sum_probs=32.0

Q ss_pred             CCCCCEEEEcCCCChHHHHHHHHHHHcCCeEEEEeCCc
Q 044010           44 DVSGKVVIITGASSGIGEHLAYEYARRGACLALCARRE   81 (248)
Q Consensus        44 ~~~~k~~lVtGg~~gIG~aia~~l~~~G~~V~l~~r~~   81 (248)
                      +.++|+++|.|| |.+|..+|..|++.|.+|.++.+.+
T Consensus        27 ~~~~k~vvViGg-G~iG~E~A~~l~~~g~~Vtlie~~~   63 (123)
T d1nhpa2          27 DPEVNNVVVIGS-GYIGIEAAEAFAKAGKKVTVIDILD   63 (123)
T ss_dssp             CTTCCEEEEECC-SHHHHHHHHHHHHTTCEEEEEESSS
T ss_pred             ccCCCEEEEECC-hHHHHHHHHHhhccceEEEEEEecC
Confidence            456788888866 8999999999999999999998865

>d1v59a2 c.3.1.5 (A:161-282) Dihydrolipoamide dehydrogenase {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: FAD/NAD-linked reductases, N-terminal and central domains
domain: Dihydrolipoamide dehydrogenase
species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]

Probab=94.37  E-value=0.061  Score=37.06  Aligned_cols=34  Identities=24%  Similarity=0.327  Sum_probs=29.9

Q ss_pred             CCEEEEcCCCChHHHHHHHHHHHcCCeEEEEeCCc
Q 044010           47 GKVVIITGASSGIGEHLAYEYARRGACLALCARRE   81 (248)
Q Consensus        47 ~k~~lVtGg~~gIG~aia~~l~~~G~~V~l~~r~~   81 (248)
                      -|+++|.|| |-||..+|..|++.|.+|.++.|.+
T Consensus        23 p~~~vIiG~-G~ig~E~A~~l~~lG~~Vtii~~~~   56 (122)
T d1v59a2          23 PKRLTIIGG-GIIGLEMGSVYSRLGSKVTVVEFQP   56 (122)
T ss_dssp             CSEEEEECC-SHHHHHHHHHHHHTTCEEEEECSSS
T ss_pred             CCeEEEECC-CchHHHHHHHHHhhCcceeEEEecc
Confidence            367888876 8999999999999999999998865

>d2igta1 c.66.1.51 (A:1-309) Putative methyltransferase Atu0340 {Agrobacterium tumefaciens [TaxId: 358]}

class: Alpha and beta proteins (a/b)
fold: S-adenosyl-L-methionine-dependent methyltransferases
superfamily: S-adenosyl-L-methionine-dependent methyltransferases
family: hypothetical RNA methyltransferase
domain: Putative methyltransferase Atu0340
species: Agrobacterium tumefaciens [TaxId: 358]

Probab=94.35  E-value=0.48  Score=37.94  Aligned_cols=83  Identities=11%  Similarity=-0.001  Sum_probs=56.0

Q ss_pred             CCCCEEEEcC-CCChHHHHHHHHHHHcCCeEEEEeCCcchHHHHHHHHHhhC--CCcEEEEEccCCCHHHHHHHHHHHHh
Q 044010           45 VSGKVVIITG-ASSGIGEHLAYEYARRGACLALCARREKSLEEVADTAREIG--SPDVITIRADVSKVDDCRSLVEETMN  121 (248)
Q Consensus        45 ~~~k~~lVtG-g~~gIG~aia~~l~~~G~~V~l~~r~~~~~~~~~~~l~~~~--~~~v~~~~~D~~~~~~~~~~~~~~~~  121 (248)
                      -+++++|=.. ++|+++.+.    ++.|++|+-++.+....+.+.+..+..+  ..++.+++.|+.      +.++...+
T Consensus       131 ~~~~rVLdlf~~tG~~sl~a----a~~GA~V~~VD~s~~al~~a~~N~~ln~~~~~~~~~i~~D~~------~~l~~~~~  200 (309)
T d2igta1         131 DRPLKVLNLFGYTGVASLVA----AAAGAEVTHVDASKKAIGWAKENQVLAGLEQAPIRWICEDAM------KFIQREER  200 (309)
T ss_dssp             SSCCEEEEETCTTCHHHHHH----HHTTCEEEEECSCHHHHHHHHHHHHHHTCTTSCEEEECSCHH------HHHHHHHH
T ss_pred             cCCCeEEEecCCCcHHHHHH----HhCCCeEEEEeChHHHHHHHHHhhhhhcccCCcEEEEeCCHH------HhHHHHhh
Confidence            3577777444 456655554    4679999999999888887777665443  336888887763      33444444


Q ss_pred             HcCCccEEEEccccCC
Q 044010          122 HFGRLDHLVNNAGISS  137 (248)
Q Consensus       122 ~~g~id~vv~~ag~~~  137 (248)
                      +..++|+||.......
T Consensus       201 ~~~~fD~IilDPP~f~  216 (309)
T d2igta1         201 RGSTYDIILTDPPKFG  216 (309)
T ss_dssp             HTCCBSEEEECCCSEE
T ss_pred             cCCCCCEEEECCCccc
Confidence            5568999999876443

>d1b0aa1 c.2.1.7 (A:123-288) Methylenetetrahydrofolate dehydrogenase/cyclohydrolase {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Aminoacid dehydrogenase-like, C-terminal domain
domain: Methylenetetrahydrofolate dehydrogenase/cyclohydrolase
species: Escherichia coli [TaxId: 562]

Probab=94.34  E-value=0.098  Score=38.18  Aligned_cols=43  Identities=26%  Similarity=0.338  Sum_probs=37.8

Q ss_pred             cCCCCCEEEEcCCCChHHHHHHHHHHHcCCeEEEEeCCcchHH
Q 044010           43 EDVSGKVVIITGASSGIGEHLAYEYARRGACLALCARREKSLE   85 (248)
Q Consensus        43 ~~~~~k~~lVtGg~~gIG~aia~~l~~~G~~V~l~~r~~~~~~   85 (248)
                      -+++||+++|.|-+.-.|+.++..|.++|++|.++.......+
T Consensus        33 i~l~GK~v~VIGrS~~VG~Pla~lL~~~gatVt~~h~~t~~l~   75 (166)
T d1b0aa1          33 IDTFGLNAVVIGASNIVGRPMSMELLLAGCTTTVTHRFTKNLR   75 (166)
T ss_dssp             CCCTTCEEEEECCCTTTHHHHHHHHHTTTCEEEEECSSCSCHH
T ss_pred             cccccceEEEEeccccccHHHHHHHHHhhccccccccccchhH
Confidence            4789999999999999999999999999999998877655433

>d1li4a1 c.2.1.4 (A:190-352) S-adenosylhomocystein hydrolase {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Formate/glycerate dehydrogenases, NAD-domain
domain: S-adenosylhomocystein hydrolase
species: Human (Homo sapiens) [TaxId: 9606]

Probab=94.24  E-value=0.044  Score=39.99  Aligned_cols=39  Identities=21%  Similarity=0.284  Sum_probs=35.2

Q ss_pred             cCCCCCEEEEcCCCChHHHHHHHHHHHcCCeEEEEeCCcc
Q 044010           43 EDVSGKVVIITGASSGIGEHLAYEYARRGACLALCARREK   82 (248)
Q Consensus        43 ~~~~~k~~lVtGg~~gIG~aia~~l~~~G~~V~l~~r~~~   82 (248)
                      ..+.||+++|.|- |.+|+.+|+.+...|++|++...++.
T Consensus        20 ~~l~Gk~v~V~Gy-G~iG~g~A~~~rg~G~~V~v~e~dp~   58 (163)
T d1li4a1          20 VMIAGKVAVVAGY-GDVGKGCAQALRGFGARVIITEIDPI   58 (163)
T ss_dssp             CCCTTCEEEEECC-SHHHHHHHHHHHHTTCEEEEECSCHH
T ss_pred             ceecCCEEEEecc-ccccHHHHHHHHhCCCeeEeeecccc
Confidence            4689999999965 79999999999999999999999874

>d1d7ya2 c.3.1.5 (A:116-236) NADH-dependent ferredoxin reductase, BphA4 {Pseudomonas sp., KKS102 [TaxId: 306]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: FAD/NAD-linked reductases, N-terminal and central domains
domain: NADH-dependent ferredoxin reductase, BphA4
species: Pseudomonas sp., KKS102 [TaxId: 306]

Probab=94.20  E-value=0.043  Score=37.85  Aligned_cols=36  Identities=22%  Similarity=0.324  Sum_probs=31.5

Q ss_pred             CCCEEEEcCCCChHHHHHHHHHHHcCCeEEEEeCCcc
Q 044010           46 SGKVVIITGASSGIGEHLAYEYARRGACLALCARREK   82 (248)
Q Consensus        46 ~~k~~lVtGg~~gIG~aia~~l~~~G~~V~l~~r~~~   82 (248)
                      ++|+++|.|| |.+|..+|..|.++|.+|.++.+.+.
T Consensus        29 ~~~~vvIIGg-G~iG~E~A~~l~~~g~~Vtli~~~~~   64 (121)
T d1d7ya2          29 PQSRLLIVGG-GVIGLELAATARTAGVHVSLVETQPR   64 (121)
T ss_dssp             TTCEEEEECC-SHHHHHHHHHHHHTTCEEEEEESSSS
T ss_pred             cCCeEEEECc-chhHHHHHHHhhcccceEEEEeeccc
Confidence            3578888876 89999999999999999999998764

>d3grsa2 c.3.1.5 (A:166-290) Glutathione reductase {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: FAD/NAD-linked reductases, N-terminal and central domains
domain: Glutathione reductase
species: Human (Homo sapiens) [TaxId: 9606]

Probab=94.07  E-value=0.068  Score=36.91  Aligned_cols=33  Identities=24%  Similarity=0.236  Sum_probs=29.7

Q ss_pred             CEEEEcCCCChHHHHHHHHHHHcCCeEEEEeCCc
Q 044010           48 KVVIITGASSGIGEHLAYEYARRGACLALCARRE   81 (248)
Q Consensus        48 k~~lVtGg~~gIG~aia~~l~~~G~~V~l~~r~~   81 (248)
                      |+++|.|| |.||..+|..|++.|.+|.++.|.+
T Consensus        23 k~vvIvGg-G~iG~E~A~~l~~~G~~Vtlv~~~~   55 (125)
T d3grsa2          23 GRSVIVGA-GYIAVEMAGILSALGSKTSLMIRHD   55 (125)
T ss_dssp             SEEEEECC-SHHHHHHHHHHHHTTCEEEEECSSS
T ss_pred             CEEEEEcC-CccHHHHHHHHhcCCcEEEEEeecc
Confidence            67888877 7899999999999999999999965

>d1a4ia1 c.2.1.7 (A:127-296) Methylenetetrahydrofolate dehydrogenase/cyclohydrolase {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Aminoacid dehydrogenase-like, C-terminal domain
domain: Methylenetetrahydrofolate dehydrogenase/cyclohydrolase
species: Human (Homo sapiens) [TaxId: 9606]

Probab=94.04  E-value=0.094  Score=38.48  Aligned_cols=43  Identities=16%  Similarity=0.343  Sum_probs=38.5

Q ss_pred             cCCCCCEEEEcCCCChHHHHHHHHHHHcCCeEEEEeCCcchHH
Q 044010           43 EDVSGKVVIITGASSGIGEHLAYEYARRGACLALCARREKSLE   85 (248)
Q Consensus        43 ~~~~~k~~lVtGg~~gIG~aia~~l~~~G~~V~l~~r~~~~~~   85 (248)
                      -+++||+++|.|-+.-+|+.++..|+++|++|.++........
T Consensus        35 i~l~Gk~vvVIGrS~iVGrPLa~lL~~~gatVt~~~~~t~~l~   77 (170)
T d1a4ia1          35 VPIAGRHAVVVGRSKIVGAPMHDLLLWNNATVTTCHSKTAHLD   77 (170)
T ss_dssp             CCCTTCEEEEECCCTTTHHHHHHHHHHTTCEEEEECTTCSSHH
T ss_pred             cccccceEEEEecCCccchHHHHHHHhccCceEEEecccccHH
Confidence            4799999999999999999999999999999999988665443

>d1xhca2 c.3.1.5 (A:104-225) NADH oxidase /nitrite reductase {Pyrococcus furiosus [TaxId: 2261]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: FAD/NAD-linked reductases, N-terminal and central domains
domain: NADH oxidase /nitrite reductase
species: Pyrococcus furiosus [TaxId: 2261]

Probab=93.92  E-value=0.082  Score=36.29  Aligned_cols=34  Identities=32%  Similarity=0.307  Sum_probs=30.1

Q ss_pred             CCEEEEcCCCChHHHHHHHHHHHcCCeEEEEeCCc
Q 044010           47 GKVVIITGASSGIGEHLAYEYARRGACLALCARRE   81 (248)
Q Consensus        47 ~k~~lVtGg~~gIG~aia~~l~~~G~~V~l~~r~~   81 (248)
                      +|.++|.|| |.+|..+|..|++.|.+|.++.|.+
T Consensus        32 ~~~vvIiGg-G~iG~E~A~~l~~~g~~Vtlv~~~~   65 (122)
T d1xhca2          32 SGEAIIIGG-GFIGLELAGNLAEAGYHVKLIHRGA   65 (122)
T ss_dssp             HSEEEEEEC-SHHHHHHHHHHHHTTCEEEEECSSS
T ss_pred             CCcEEEECC-cHHHHHHHHHhhcccceEEEEeccc
Confidence            467888876 8999999999999999999998865

>d1gesa2 c.3.1.5 (A:147-262) Glutathione reductase {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: FAD/NAD-linked reductases, N-terminal and central domains
domain: Glutathione reductase
species: Escherichia coli [TaxId: 562]

Probab=93.88  E-value=0.08  Score=36.02  Aligned_cols=33  Identities=27%  Similarity=0.193  Sum_probs=28.8

Q ss_pred             CEEEEcCCCChHHHHHHHHHHHcCCeEEEEeCCc
Q 044010           48 KVVIITGASSGIGEHLAYEYARRGACLALCARRE   81 (248)
Q Consensus        48 k~~lVtGg~~gIG~aia~~l~~~G~~V~l~~r~~   81 (248)
                      |+++|.|| |.+|..+|..|.+.|.+|.++.|.+
T Consensus        22 ~~vvIiGg-G~ig~E~A~~l~~~G~~Vtlve~~~   54 (116)
T d1gesa2          22 ERVAVVGA-GYIGVELGGVINGLGAKTHLFEMFD   54 (116)
T ss_dssp             SEEEEECC-SHHHHHHHHHHHHTTCEEEEECSSS
T ss_pred             CEEEEECC-ChhhHHHHHHhhccccEEEEEeecc
Confidence            56777766 8999999999999999999999865

>d1onfa2 c.3.1.5 (A:154-270) Glutathione reductase {Plasmodium falciparum [TaxId: 5833]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: FAD/NAD-linked reductases, N-terminal and central domains
domain: Glutathione reductase
species: Plasmodium falciparum [TaxId: 5833]

Probab=93.86  E-value=0.072  Score=36.43  Aligned_cols=34  Identities=26%  Similarity=0.200  Sum_probs=30.1

Q ss_pred             CCEEEEcCCCChHHHHHHHHHHHcCCeEEEEeCCc
Q 044010           47 GKVVIITGASSGIGEHLAYEYARRGACLALCARRE   81 (248)
Q Consensus        47 ~k~~lVtGg~~gIG~aia~~l~~~G~~V~l~~r~~   81 (248)
                      .|+++|.|| |.+|..+|..|++.|.+|.++.|.+
T Consensus        22 p~~v~IiGg-G~iG~E~A~~l~~~g~~Vtlv~~~~   55 (117)
T d1onfa2          22 SKKIGIVGS-GYIAVELINVIKRLGIDSYIFARGN   55 (117)
T ss_dssp             CSEEEEECC-SHHHHHHHHHHHTTTCEEEEECSSS
T ss_pred             CCEEEEECC-chHHHHHHHHHHhccccceeeehhc
Confidence            467888877 8999999999999999999999865

>d1sc6a1 c.2.1.4 (A:108-295) Phosphoglycerate dehydrogenase {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Formate/glycerate dehydrogenases, NAD-domain
domain: Phosphoglycerate dehydrogenase
species: Escherichia coli [TaxId: 562]

Probab=93.83  E-value=0.49  Score=34.80  Aligned_cols=64  Identities=17%  Similarity=0.171  Sum_probs=44.1

Q ss_pred             cCCCCCEEEEcCCCChHHHHHHHHHHHcCCeEEEEeCCcchHH------HHHHHHHhhCCCcEEEEEccCCCH
Q 044010           43 EDVSGKVVIITGASSGIGEHLAYEYARRGACLALCARREKSLE------EVADTAREIGSPDVITIRADVSKV  109 (248)
Q Consensus        43 ~~~~~k~~lVtGg~~gIG~aia~~l~~~G~~V~l~~r~~~~~~------~~~~~l~~~~~~~v~~~~~D~~~~  109 (248)
                      .++.++++.|.|- |.||..+|+.+...|.+|...++......      +..+++-+.  .++..+.+.+++.
T Consensus        40 ~~l~~~~vgiiG~-G~IG~~va~~l~~fg~~v~~~d~~~~~~~~~~~~~~~l~ell~~--sDii~i~~plt~~  109 (188)
T d1sc6a1          40 FEARGKKLGIIGY-GHIGTQLGILAESLGMYVYFYDIENKLPLGNATQVQHLSDLLNM--SDVVSLHVPENPS  109 (188)
T ss_dssp             CCSTTCEEEEECC-SHHHHHHHHHHHHTTCEEEEECSSCCCCCTTCEECSCHHHHHHH--CSEEEECCCSSTT
T ss_pred             ccccceEEEEeec-ccchhhhhhhcccccceEeeccccccchhhhhhhhhhHHHHHhh--ccceeecccCCcc
Confidence            3688999999954 99999999999999999999988543110      001222222  2566777777654

>d1c0pa1 c.4.1.2 (A:999-1193,A:1289-1361) D-aminoacid oxidase, N-terminal domain {Rhodotorula gracilis [TaxId: 5286]}

class: Alpha and beta proteins (a/b)
fold: Nucleotide-binding domain
superfamily: Nucleotide-binding domain
family: D-aminoacid oxidase, N-terminal domain
domain: D-aminoacid oxidase, N-terminal domain
species: Rhodotorula gracilis [TaxId: 5286]

Probab=93.71  E-value=0.046  Score=41.72  Aligned_cols=34  Identities=32%  Similarity=0.385  Sum_probs=29.4

Q ss_pred             CCEEEEcCCCChHHHHHHHHHHHcCCeEEEEeCCc
Q 044010           47 GKVVIITGASSGIGEHLAYEYARRGACLALCARRE   81 (248)
Q Consensus        47 ~k~~lVtGg~~gIG~aia~~l~~~G~~V~l~~r~~   81 (248)
                      .|.|+|.|| |-.|.++|..|+++|++|.++.|+.
T Consensus         6 ~~kVvVIGa-GiaGl~~A~~L~~~G~~V~vier~~   39 (268)
T d1c0pa1           6 QKRVVVLGS-GVIGLSSALILARKGYSVHILARDL   39 (268)
T ss_dssp             SCEEEEECC-SHHHHHHHHHHHHTTCEEEEEESSC
T ss_pred             CCcEEEECc-cHHHHHHHHHHHHCCCCEEEEeCCC
Confidence            456888876 8899999999999999999999864

>d2ahra2 c.2.1.6 (A:1-152) Pyrroline-5-carboxylate reductase ProC {Streptococcus pyogenes [TaxId: 1314]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: 6-phosphogluconate dehydrogenase-like, N-terminal domain
domain: Pyrroline-5-carboxylate reductase ProC
species: Streptococcus pyogenes [TaxId: 1314]

Probab=93.69  E-value=0.041  Score=39.54  Aligned_cols=40  Identities=10%  Similarity=0.076  Sum_probs=32.5

Q ss_pred             EEcCCCChHHHHHHHHHHHcCCeEEEEeCCcchHHHHHHHH
Q 044010           51 IITGASSGIGEHLAYEYARRGACLALCARREKSLEEVADTA   91 (248)
Q Consensus        51 lVtGg~~gIG~aia~~l~~~G~~V~l~~r~~~~~~~~~~~l   91 (248)
                      .+. |.|-+|.++++.|.+.|+++.+.+|+.++.++..+++
T Consensus         4 g~I-G~G~mG~al~~~l~~~~~~i~v~~r~~~~~~~l~~~~   43 (152)
T d2ahra2           4 GII-GVGKMASAIIKGLKQTPHELIISGSSLERSKEIAEQL   43 (152)
T ss_dssp             EEE-CCSHHHHHHHHHHTTSSCEEEEECSSHHHHHHHHHHH
T ss_pred             EEE-eccHHHHHHHHHHHhCCCeEEEEcChHHhHHhhcccc
Confidence            344 5699999999999999999999999987766655544

>d1yqga2 c.2.1.6 (A:1-152) Pyrroline-5-carboxylate reductase ProC {Neisseria meningitidis, serogroup B [TaxId: 487]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: 6-phosphogluconate dehydrogenase-like, N-terminal domain
domain: Pyrroline-5-carboxylate reductase ProC
species: Neisseria meningitidis, serogroup B [TaxId: 487]

Probab=93.66  E-value=0.052  Score=38.85  Aligned_cols=40  Identities=15%  Similarity=0.260  Sum_probs=31.9

Q ss_pred             EEEcCCCChHHHHHHHHHHHcC-CeEEEEeCCcchHHHHHHH
Q 044010           50 VIITGASSGIGEHLAYEYARRG-ACLALCARREKSLEEVADT   90 (248)
Q Consensus        50 ~lVtGg~~gIG~aia~~l~~~G-~~V~l~~r~~~~~~~~~~~   90 (248)
                      +.+.|+ |-+|.++++.|++.| ++|.+.+|++++.++..++
T Consensus         3 I~fIG~-G~MG~ai~~~l~~~~~~~i~v~~r~~~~~~~l~~~   43 (152)
T d1yqga2           3 VYFLGG-GNMAAAVAGGLVKQGGYRIYIANRGAEKRERLEKE   43 (152)
T ss_dssp             EEEECC-SHHHHHHHHHHHHHCSCEEEEECSSHHHHHHHHHH
T ss_pred             EEEEcC-cHHHHHHHHHHHHCCCCcEEEEeCChhHHHHhhhh
Confidence            445555 999999999999887 7999999998776665443

>d1jg1a_ c.66.1.7 (A:) Protein-L-isoaspartyl O-methyltransferase {Archaeon Pyrococcus furiosus [TaxId: 2261]}

class: Alpha and beta proteins (a/b)
fold: S-adenosyl-L-methionine-dependent methyltransferases
superfamily: S-adenosyl-L-methionine-dependent methyltransferases
family: Protein-L-isoaspartyl O-methyltransferase
domain: Protein-L-isoaspartyl O-methyltransferase
species: Archaeon Pyrococcus furiosus [TaxId: 2261]

Probab=93.60  E-value=0.16  Score=38.58  Aligned_cols=80  Identities=21%  Similarity=0.191  Sum_probs=61.8

Q ss_pred             CCCEEEEcCCCChHHHHHHHHHHHcCCeEEEEeCCcchHHHHHHHHHhhCCCcEEEEEccCCCHHHHHHHHHHHHhHcCC
Q 044010           46 SGKVVIITGASSGIGEHLAYEYARRGACLALCARREKSLEEVADTAREIGSPDVITIRADVSKVDDCRSLVEETMNHFGR  125 (248)
Q Consensus        46 ~~k~~lVtGg~~gIG~aia~~l~~~G~~V~l~~r~~~~~~~~~~~l~~~~~~~v~~~~~D~~~~~~~~~~~~~~~~~~g~  125 (248)
                      +|.++|..|+++|--.++.-++.  |.+|+.+.++++-.+.+.+.+++.+-..+.++..|..+-          ....++
T Consensus        78 ~g~~VLeIGsGsGY~taila~l~--g~~V~~ie~~~~l~~~a~~~l~~~g~~nv~~~~gd~~~g----------~~~~~p  145 (215)
T d1jg1a_          78 PGMNILEVGTGSGWNAALISEIV--KTDVYTIERIPELVEFAKRNLERAGVKNVHVILGDGSKG----------FPPKAP  145 (215)
T ss_dssp             TTCCEEEECCTTSHHHHHHHHHH--CSCEEEEESCHHHHHHHHHHHHHTTCCSEEEEESCGGGC----------CGGGCC
T ss_pred             ccceEEEecCCCChhHHHHHHhh--CceeEEEeccHHHHHHHHHHHHHcCCceeEEEECccccC----------CcccCc
Confidence            46789999988887777766665  567999999988888888888887777899999998542          123468


Q ss_pred             ccEEEEccccCC
Q 044010          126 LDHLVNNAGISS  137 (248)
Q Consensus       126 id~vv~~ag~~~  137 (248)
                      .|.++.+++...
T Consensus       146 fD~Iiv~~a~~~  157 (215)
T d1jg1a_         146 YDVIIVTAGAPK  157 (215)
T ss_dssp             EEEEEECSBBSS
T ss_pred             ceeEEeeccccc
Confidence            999999887643

>d2esra1 c.66.1.46 (A:28-179) Putative methyltransferase SPy1538 {Streptococcus pyogenes [TaxId: 1314]}

class: Alpha and beta proteins (a/b)
fold: S-adenosyl-L-methionine-dependent methyltransferases
superfamily: S-adenosyl-L-methionine-dependent methyltransferases
family: YhhF-like
domain: Putative methyltransferase SPy1538
species: Streptococcus pyogenes [TaxId: 1314]

Probab=93.56  E-value=0.29  Score=34.67  Aligned_cols=78  Identities=15%  Similarity=0.211  Sum_probs=54.4

Q ss_pred             cCCCCCEEEEcCCC-ChHHHHHHHHHHHcCC-eEEEEeCCcchHHHHHHHHHhhCC-CcEEEEEccCCCHHHHHHHHHHH
Q 044010           43 EDVSGKVVIITGAS-SGIGEHLAYEYARRGA-CLALCARREKSLEEVADTAREIGS-PDVITIRADVSKVDDCRSLVEET  119 (248)
Q Consensus        43 ~~~~~k~~lVtGg~-~gIG~aia~~l~~~G~-~V~l~~r~~~~~~~~~~~l~~~~~-~~v~~~~~D~~~~~~~~~~~~~~  119 (248)
                      .+++|+.+|=.|++ |++|.+    .+++|+ +|+.++.+++..+.+.+.++..+. .++.+++.|..+      .++  
T Consensus        11 ~~~~g~~vlDl~~GtG~~~ie----a~~rga~~v~~ve~~~~a~~~~~~n~~~~~~~~~~~ii~~D~~~------~l~--   78 (152)
T d2esra1          11 PYFNGGRVLDLFAGSGGLAIE----AVSRGMSAAVLVEKNRKAQAIIQDNIIMTKAENRFTLLKMEAER------AID--   78 (152)
T ss_dssp             SCCCSCEEEEETCTTCHHHHH----HHHTTCCEEEEECCCHHHHHHHHHHHHTTTCGGGEEEECSCHHH------HHH--
T ss_pred             hhCCCCeEEEcCCccCHHHHH----HHHhCcceeeeehhchhhhhhhhhhhhhcccccchhhhcccccc------ccc--
Confidence            36889998866665 556664    456887 899999998887777777765542 368888888532      222  


Q ss_pred             HhHcCCccEEEEcc
Q 044010          120 MNHFGRLDHLVNNA  133 (248)
Q Consensus       120 ~~~~g~id~vv~~a  133 (248)
                       ...++.|+++.+.
T Consensus        79 -~~~~~fDiIf~DP   91 (152)
T d2esra1          79 -CLTGRFDLVFLDP   91 (152)
T ss_dssp             -HBCSCEEEEEECC
T ss_pred             -ccccccceeEech
Confidence             2345899998774

>d1lvla2 c.3.1.5 (A:151-265) Dihydrolipoamide dehydrogenase {Pseudomonas putida [TaxId: 303]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: FAD/NAD-linked reductases, N-terminal and central domains
domain: Dihydrolipoamide dehydrogenase
species: Pseudomonas putida [TaxId: 303]

Probab=93.53  E-value=0.086  Score=35.72  Aligned_cols=34  Identities=26%  Similarity=0.472  Sum_probs=29.5

Q ss_pred             CCEEEEcCCCChHHHHHHHHHHHcCCeEEEEeCCc
Q 044010           47 GKVVIITGASSGIGEHLAYEYARRGACLALCARRE   81 (248)
Q Consensus        47 ~k~~lVtGg~~gIG~aia~~l~~~G~~V~l~~r~~   81 (248)
                      .|+++|.|| |-+|..+|..|.+.|.+|.++.|.+
T Consensus        21 p~~vvIiGg-G~~G~E~A~~l~~~g~~Vtlve~~~   54 (115)
T d1lvla2          21 PQHLVVVGG-GYIGLELGIAYRKLGAQVSVVEARE   54 (115)
T ss_dssp             CSEEEEECC-SHHHHHHHHHHHHHTCEEEEECSSS
T ss_pred             CCeEEEECC-CHHHHHHHHHHhhcccceEEEeeec
Confidence            367777766 8999999999999999999998865

>d2fyta1 c.66.1.6 (A:238-548) Protein arginine N-methyltransferase 3, PRMT3 {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: S-adenosyl-L-methionine-dependent methyltransferases
superfamily: S-adenosyl-L-methionine-dependent methyltransferases
family: Arginine methyltransferase
domain: Protein arginine N-methyltransferase 3, PRMT3
species: Human (Homo sapiens) [TaxId: 9606]

Probab=93.53  E-value=0.16  Score=40.68  Aligned_cols=77  Identities=22%  Similarity=0.260  Sum_probs=53.4

Q ss_pred             cCCCCCEEEEcCCCChHHHHHHHHHHHcCC-eEEEEeCCcchHHHHHHHHHhhC-CCcEEEEEccCCCHHHHHHHHHHHH
Q 044010           43 EDVSGKVVIITGASSGIGEHLAYEYARRGA-CLALCARREKSLEEVADTAREIG-SPDVITIRADVSKVDDCRSLVEETM  120 (248)
Q Consensus        43 ~~~~~k~~lVtGg~~gIG~aia~~l~~~G~-~V~l~~r~~~~~~~~~~~l~~~~-~~~v~~~~~D~~~~~~~~~~~~~~~  120 (248)
                      ...+||++|-.|++.|+   ++..++++|+ +|+.++.++. ...+.+..++.+ ..++.++..|+.+...         
T Consensus        32 ~~~~~~~VLDiGcG~G~---lsl~aa~~Ga~~V~aid~s~~-~~~a~~~~~~~~~~~~i~~~~~~~~~l~~---------   98 (311)
T d2fyta1          32 HIFKDKVVLDVGCGTGI---LSMFAAKAGAKKVLGVDQSEI-LYQAMDIIRLNKLEDTITLIKGKIEEVHL---------   98 (311)
T ss_dssp             GGTTTCEEEEETCTTSH---HHHHHHHTTCSEEEEEESSTH-HHHHHHHHHHTTCTTTEEEEESCTTTSCC---------
T ss_pred             ccCCcCEEEEECCCCCH---HHHHHHHcCCCEEEEEeCHHH-HHHHHHHHHHhCCCccceEEEeeHHHhcC---------
Confidence            35689999999998775   4556777897 7888887764 344444444433 4578899999877531         


Q ss_pred             hHcCCccEEEEcc
Q 044010          121 NHFGRLDHLVNNA  133 (248)
Q Consensus       121 ~~~g~id~vv~~a  133 (248)
                       ...++|+++...
T Consensus        99 -~~~~~D~Ivse~  110 (311)
T d2fyta1          99 -PVEKVDVIISEW  110 (311)
T ss_dssp             -SCSCEEEEEECC
T ss_pred             -ccccceEEEEee
Confidence             124799998754

>d1pjca1 c.2.1.4 (A:136-303) L-alanine dehydrogenase {Phormidium lapideum [TaxId: 32060]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Formate/glycerate dehydrogenases, NAD-domain
domain: L-alanine dehydrogenase
species: Phormidium lapideum [TaxId: 32060]

Probab=93.51  E-value=0.39  Score=34.89  Aligned_cols=80  Identities=18%  Similarity=0.118  Sum_probs=56.7

Q ss_pred             CCCCEEEEcCCCChHHHHHHHHHHHcCCeEEEEeCCcchHHHHHHHHHhhCCCcEEEEEccCCCHHHHHHHHHHHHhHcC
Q 044010           45 VSGKVVIITGASSGIGEHLAYEYARRGACLALCARREKSLEEVADTAREIGSPDVITIRADVSKVDDCRSLVEETMNHFG  124 (248)
Q Consensus        45 ~~~k~~lVtGg~~gIG~aia~~l~~~G~~V~l~~r~~~~~~~~~~~l~~~~~~~v~~~~~D~~~~~~~~~~~~~~~~~~g  124 (248)
                      .+.-+++|.|+ |--|.+.++.....|++|.+.+.+.+++++.......    .+.+   -..+.+.+++.+.       
T Consensus        30 v~pa~V~ViGa-GvaG~~A~~~A~~lGA~V~~~D~~~~~l~~l~~~~~~----~~~~---~~~~~~~l~~~~~-------   94 (168)
T d1pjca1          30 VKPGKVVILGG-GVVGTEAAKMAVGLGAQVQIFDINVERLSYLETLFGS----RVEL---LYSNSAEIETAVA-------   94 (168)
T ss_dssp             BCCCEEEEECC-SHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHGG----GSEE---EECCHHHHHHHHH-------
T ss_pred             CCCcEEEEECC-ChHHHHHHHHHhhCCCEEEEEeCcHHHHHHHHHhhcc----ccee---ehhhhhhHHHhhc-------
Confidence            35668888887 6788888888888999999999998877765554432    3332   3445555555444       


Q ss_pred             CccEEEEccccCCcc
Q 044010          125 RLDHLVNNAGISSVA  139 (248)
Q Consensus       125 ~id~vv~~ag~~~~~  139 (248)
                      +-|++|.++-+...+
T Consensus        95 ~aDivI~aalipG~~  109 (168)
T d1pjca1          95 EADLLIGAVLVPGRR  109 (168)
T ss_dssp             TCSEEEECCCCTTSS
T ss_pred             cCcEEEEeeecCCcc
Confidence            689999998876544

>d1dl5a1 c.66.1.7 (A:1-213) Protein-L-isoaspartyl O-methyltransferase {Thermotoga maritima [TaxId: 2336]}

class: Alpha and beta proteins (a/b)
fold: S-adenosyl-L-methionine-dependent methyltransferases
superfamily: S-adenosyl-L-methionine-dependent methyltransferases
family: Protein-L-isoaspartyl O-methyltransferase
domain: Protein-L-isoaspartyl O-methyltransferase
species: Thermotoga maritima [TaxId: 2336]

Probab=93.48  E-value=0.16  Score=38.45  Aligned_cols=81  Identities=16%  Similarity=0.182  Sum_probs=56.8

Q ss_pred             CCCEEEEcCCCChHHHHHHHHHHHcCCeEEEEeCCcchHHHHHHHHHhhCCCcEEEEEccCCCHHHHHHHHHHHHhHcCC
Q 044010           46 SGKVVIITGASSGIGEHLAYEYARRGACLALCARREKSLEEVADTAREIGSPDVITIRADVSKVDDCRSLVEETMNHFGR  125 (248)
Q Consensus        46 ~~k~~lVtGg~~gIG~aia~~l~~~G~~V~l~~r~~~~~~~~~~~l~~~~~~~v~~~~~D~~~~~~~~~~~~~~~~~~g~  125 (248)
                      +|.++|-.|+++|--.+..-++...+.+|+.++.+++..+.+.+.++..+-..+.++..|..+..          ...++
T Consensus        75 ~g~~VLdiG~GtG~~s~~la~~~~~~g~V~~id~~~~~~~~a~~~~~~~~~~n~~~~~~d~~~~~----------~~~~~  144 (213)
T d1dl5a1          75 KGMRVLEIGGGTGYNAAVMSRVVGEKGLVVSVEYSRKICEIAKRNVERLGIENVIFVCGDGYYGV----------PEFSP  144 (213)
T ss_dssp             TTCEEEEECCTTSHHHHHHHHHHCTTCEEEEEESCHHHHHHHHHHHHHTTCCSEEEEESCGGGCC----------GGGCC
T ss_pred             ccceEEEecCccchhHHHHHHHhCCCCcEEEeecchhhHHHhhhhHhhhcccccccccCchHHcc----------ccccc
Confidence            47788888887665544433344445599999999998888888888776667777777754321          12357


Q ss_pred             ccEEEEccccC
Q 044010          126 LDHLVNNAGIS  136 (248)
Q Consensus       126 id~vv~~ag~~  136 (248)
                      +|.++.+++..
T Consensus       145 fD~I~~~~~~~  155 (213)
T d1dl5a1         145 YDVIFVTVGVD  155 (213)
T ss_dssp             EEEEEECSBBS
T ss_pred             hhhhhhhccHH
Confidence            99999887653

>d1u8xx1 c.2.1.5 (X:3-169) Maltose-6'-phosphate glucosidase GlvA {Bacillus subtilis [TaxId: 1423]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: LDH N-terminal domain-like
domain: Maltose-6'-phosphate glucosidase GlvA
species: Bacillus subtilis [TaxId: 1423]

Probab=93.33  E-value=0.61  Score=33.71  Aligned_cols=77  Identities=14%  Similarity=0.204  Sum_probs=41.4

Q ss_pred             CEEEEcCCCChHHHHHHHHHHHc-----CCeEEEEeCCcchHHHHHHHHHh---hCCCcEEE-EEccCCCHHHHHHHHHH
Q 044010           48 KVVIITGASSGIGEHLAYEYARR-----GACLALCARREKSLEEVADTARE---IGSPDVIT-IRADVSKVDDCRSLVEE  118 (248)
Q Consensus        48 k~~lVtGg~~gIG~aia~~l~~~-----G~~V~l~~r~~~~~~~~~~~l~~---~~~~~v~~-~~~D~~~~~~~~~~~~~  118 (248)
                      .++.|.||++.-...+...++.+     +.++++.+.++++++...+.+..   ..+..... ...|      .+++   
T Consensus         4 ~KI~iIGaGsv~~~~~~~~ll~~~~~l~~~eivL~Did~~~~~~~~~~~~~~~~~~~~~~~~~~~~d------~~ea---   74 (167)
T d1u8xx1           4 FSIVIAGGGSTFTPGIVLMLLDHLEEFPIRKLKLYDNDKERQDRIAGACDVFIREKAPDIEFAATTD------PEEA---   74 (167)
T ss_dssp             EEEEEECTTSSSHHHHHHHHHHTTTTSCEEEEEEECSCHHHHHHHHHHHHHHHHHHCTTSEEEEESC------HHHH---
T ss_pred             ceEEEECCChhhhHHHHHHHHhhhhhcCCCEEEEEcCChhHHHHHHHHHHHHHHHhCCCcceEecCC------hhhc---
Confidence            34566676543222233334432     24899999999887754443332   11112222 2222      2222   


Q ss_pred             HHhHcCCccEEEEccccCC
Q 044010          119 TMNHFGRLDHLVNNAGISS  137 (248)
Q Consensus       119 ~~~~~g~id~vv~~ag~~~  137 (248)
                          ..+-|+||+.+|...
T Consensus        75 ----l~~AD~Vvitag~~~   89 (167)
T d1u8xx1          75 ----FTDVDFVMAHIRVGK   89 (167)
T ss_dssp             ----HSSCSEEEECCCTTH
T ss_pred             ----cCCCCEEEECCCcCC
Confidence                247999999999854

>d1n1ea2 c.2.1.6 (A:9-197) Glycerol-3- phosphate dehydrogenase {Trypanosome (Leishmania mexicana) [TaxId: 5665]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: 6-phosphogluconate dehydrogenase-like, N-terminal domain
domain: Glycerol-3- phosphate dehydrogenase
species: Trypanosome (Leishmania mexicana) [TaxId: 5665]

Probab=93.22  E-value=0.04  Score=41.25  Aligned_cols=39  Identities=15%  Similarity=0.269  Sum_probs=32.4

Q ss_pred             EEEEcCCCChHHHHHHHHHHHcCCeEEEEeCCcchHHHHH
Q 044010           49 VVIITGASSGIGEHLAYEYARRGACLALCARREKSLEEVA   88 (248)
Q Consensus        49 ~~lVtGg~~gIG~aia~~l~~~G~~V~l~~r~~~~~~~~~   88 (248)
                      ++.|.|+ |..|.++|..|++.|++|.+.+|+++..+...
T Consensus         9 KI~ViGa-G~wGtAlA~~La~~g~~V~l~~r~~~~~~~i~   47 (189)
T d1n1ea2           9 KAVVFGS-GAFGTALAMVLSKKCREVCVWHMNEEEVRLVN   47 (189)
T ss_dssp             EEEEECC-SHHHHHHHHHHHTTEEEEEEECSCHHHHHHHH
T ss_pred             eEEEECC-CHHHHHHHHHHHHcCCeEEEEEecHHHHHHHh
Confidence            5778876 78999999999999999999999876655443

>d1dxla2 c.3.1.5 (A:153-275) Dihydrolipoamide dehydrogenase {Garden pea (Pisum sativum) [TaxId: 3888]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: FAD/NAD-linked reductases, N-terminal and central domains
domain: Dihydrolipoamide dehydrogenase
species: Garden pea (Pisum sativum) [TaxId: 3888]

Probab=93.21  E-value=0.1  Score=35.91  Aligned_cols=35  Identities=20%  Similarity=0.323  Sum_probs=30.7

Q ss_pred             CCEEEEcCCCChHHHHHHHHHHHcCCeEEEEeCCcc
Q 044010           47 GKVVIITGASSGIGEHLAYEYARRGACLALCARREK   82 (248)
Q Consensus        47 ~k~~lVtGg~~gIG~aia~~l~~~G~~V~l~~r~~~   82 (248)
                      .|.++|.|| |-||..+|..|.+.|.+|.++.|.+.
T Consensus        25 p~~~viiG~-G~iglE~A~~~~~~G~~Vtvi~~~~~   59 (123)
T d1dxla2          25 PKKLVVIGA-GYIGLEMGSVWGRIGSEVTVVEFASE   59 (123)
T ss_dssp             CSEEEESCC-SHHHHHHHHHHHHHTCEEEEECSSSS
T ss_pred             CCeEEEEcc-chHHHHHHHHHHhcCCeEEEEEEccc
Confidence            467888877 89999999999999999999988653

>d1p3da1 c.5.1.1 (A:11-106) UDP-N-acetylmuramate-alanine ligase MurC {Haemophilus influenzae [TaxId: 727]}

class: Alpha and beta proteins (a/b)
fold: MurCD N-terminal domain
superfamily: MurCD N-terminal domain
family: MurCD N-terminal domain
domain: UDP-N-acetylmuramate-alanine ligase MurC
species: Haemophilus influenzae [TaxId: 727]

Probab=93.13  E-value=0.46  Score=31.02  Aligned_cols=72  Identities=14%  Similarity=0.153  Sum_probs=45.6

Q ss_pred             CCCEEEEcCCCChHH-HHHHHHHHHcCCeEEEEeCCcchHHHHHHHHHhhCCCcEEEEEccCCCHHHHHHHHHHHHhHcC
Q 044010           46 SGKVVIITGASSGIG-EHLAYEYARRGACLALCARREKSLEEVADTAREIGSPDVITIRADVSKVDDCRSLVEETMNHFG  124 (248)
Q Consensus        46 ~~k~~lVtGg~~gIG-~aia~~l~~~G~~V~l~~r~~~~~~~~~~~l~~~~~~~v~~~~~D~~~~~~~~~~~~~~~~~~g  124 (248)
                      +.|++.+.|- +|+| .++|+.|.++|++|...|++...   ..+.+.+.+   +.+...+-  .+           ...
T Consensus         7 ~~~~ihfiGi-gG~GMs~LA~~L~~~G~~VsGSD~~~~~---~~~~L~~~G---i~v~~g~~--~~-----------~i~   66 (96)
T d1p3da1           7 RVQQIHFIGI-GGAGMSGIAEILLNEGYQISGSDIADGV---VTQRLAQAG---AKIYIGHA--EE-----------HIE   66 (96)
T ss_dssp             TCCEEEEETT-TSTTHHHHHHHHHHHTCEEEEEESCCSH---HHHHHHHTT---CEEEESCC--GG-----------GGT
T ss_pred             hCCEEEEEEE-CHHHHHHHHHHHHhCCCEEEEEeCCCCh---hhhHHHHCC---CeEEECCc--cc-----------cCC
Confidence            4567777765 5666 45799999999999999987643   233444443   23332222  11           113


Q ss_pred             CccEEEEccccCC
Q 044010          125 RLDHLVNNAGISS  137 (248)
Q Consensus       125 ~id~vv~~ag~~~  137 (248)
                      +.|.+|...++..
T Consensus        67 ~~d~vV~S~AI~~   79 (96)
T d1p3da1          67 GASVVVVSSAIKD   79 (96)
T ss_dssp             TCSEEEECTTSCT
T ss_pred             CCCEEEECCCcCC
Confidence            6899999988754

>d1djqa2 c.3.1.1 (A:490-645) Trimethylamine dehydrogenase, C-terminal domain {Methylophilus methylotrophus, w3a1 [TaxId: 17]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: C-terminal domain of adrenodoxin reductase-like
domain: Trimethylamine dehydrogenase, C-terminal domain
species: Methylophilus methylotrophus, w3a1 [TaxId: 17]

Probab=92.98  E-value=0.1  Score=37.20  Aligned_cols=37  Identities=22%  Similarity=0.209  Sum_probs=29.9

Q ss_pred             CCCEEEEc-CCCChHHHHHHHHHHHcCCeEEEEeCCcc
Q 044010           46 SGKVVIIT-GASSGIGEHLAYEYARRGACLALCARREK   82 (248)
Q Consensus        46 ~~k~~lVt-Gg~~gIG~aia~~l~~~G~~V~l~~r~~~   82 (248)
                      .++.++|. .|++.||.++|..|+++|.+|.++.+.+.
T Consensus        38 ~~~~vvi~d~ggg~ig~e~A~~la~~G~~Vtlv~~~~~   75 (156)
T d1djqa2          38 IGKRVVILNADTYFMAPSLAEKLATAGHEVTIVSGVHL   75 (156)
T ss_dssp             CCSEEEEEECCCSSHHHHHHHHHHHTTCEEEEEESSCT
T ss_pred             cCCceEEEecCCChHHHHHHHHHHHcCCeEEEEecCCc
Confidence            45555554 46689999999999999999999998653

>d1p9oa_ c.72.3.1 (A:) Phosphopantothenoylcysteine synthetase {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: Ribokinase-like
superfamily: CoaB-like
family: CoaB-like
domain: Phosphopantothenoylcysteine synthetase
species: Human (Homo sapiens) [TaxId: 9606]

Probab=92.96  E-value=0.14  Score=40.77  Aligned_cols=24  Identities=17%  Similarity=0.127  Sum_probs=21.2

Q ss_pred             ChHHHHHHHHHHHcCCeEEEEeCC
Q 044010           57 SGIGEHLAYEYARRGACLALCARR   80 (248)
Q Consensus        57 ~gIG~aia~~l~~~G~~V~l~~r~   80 (248)
                      |..|.++|+.+..+|++|+++.+.
T Consensus        46 Gk~G~alA~~~~~~Ga~V~li~g~   69 (290)
T d1p9oa_          46 GRRGATSAEAFLAAGYGVLFLYRA   69 (290)
T ss_dssp             CHHHHHHHHHHHHTTCEEEEEEET
T ss_pred             hHHHHHHHHHHHHcCCEEEEEecC
Confidence            459999999999999999998654

>d1ojta2 c.3.1.5 (A:276-400) Dihydrolipoamide dehydrogenase {Neisseria meningitidis [TaxId: 487]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: FAD/NAD-linked reductases, N-terminal and central domains
domain: Dihydrolipoamide dehydrogenase
species: Neisseria meningitidis [TaxId: 487]

Probab=92.95  E-value=0.13  Score=35.51  Aligned_cols=35  Identities=20%  Similarity=0.288  Sum_probs=30.4

Q ss_pred             CCCEEEEcCCCChHHHHHHHHHHHcCCeEEEEeCCc
Q 044010           46 SGKVVIITGASSGIGEHLAYEYARRGACLALCARRE   81 (248)
Q Consensus        46 ~~k~~lVtGg~~gIG~aia~~l~~~G~~V~l~~r~~   81 (248)
                      ..|.++|.|| |-||..+|..|.+.|.+|.++.+.+
T Consensus        25 ~p~~vvIiGg-G~IG~E~A~~~~~~G~~Vtive~~~   59 (125)
T d1ojta2          25 VPGKLLIIGG-GIIGLEMGTVYSTLGSRLDVVEMMD   59 (125)
T ss_dssp             CCSEEEEESC-SHHHHHHHHHHHHHTCEEEEECSSS
T ss_pred             cCCeEEEECC-CHHHHHHHHHhhcCCCEEEEEEeec
Confidence            3478888877 8999999999999999999998854

>d1m6ya2 c.66.1.23 (A:2-114,A:216-294) TM0872, methyltransferase domain {Thermotoga maritima [TaxId: 2336]}

class: Alpha and beta proteins (a/b)
fold: S-adenosyl-L-methionine-dependent methyltransferases
superfamily: S-adenosyl-L-methionine-dependent methyltransferases
family: MraW-like putative methyltransferases
domain: TM0872, methyltransferase domain
species: Thermotoga maritima [TaxId: 2336]

Probab=92.87  E-value=0.15  Score=38.10  Aligned_cols=86  Identities=12%  Similarity=0.146  Sum_probs=63.6

Q ss_pred             CCCCCEEEEcCCCChHHHHHHHHHHHcCCeEEEEeCCcchHHHHHHHHHhhCCCcEEEEEccCCCHHHHHHHHHHHHhHc
Q 044010           44 DVSGKVVIITGASSGIGEHLAYEYARRGACLALCARREKSLEEVADTAREIGSPDVITIRADVSKVDDCRSLVEETMNHF  123 (248)
Q Consensus        44 ~~~~k~~lVtGg~~gIG~aia~~l~~~G~~V~l~~r~~~~~~~~~~~l~~~~~~~v~~~~~D~~~~~~~~~~~~~~~~~~  123 (248)
                      .-.+..+=+|.|+||...++.+++ . +.+|+.++++++..+.+.+.++..+ .++.++..++.+...+   ....  ..
T Consensus        22 ~~~~~~lD~t~G~Gghs~~il~~~-~-~~~vi~~D~d~~~l~~a~~~l~~~~-~r~~~~~~~f~~~~~~---~~~~--~~   93 (192)
T d1m6ya2          22 EDEKIILDCTVGEGGHSRAILEHC-P-GCRIIGIDVDSEVLRIAEEKLKEFS-DRVSLFKVSYREADFL---LKTL--GI   93 (192)
T ss_dssp             CTTCEEEETTCTTSHHHHHHHHHC-T-TCEEEEEESCHHHHHHHHHHTGGGT-TTEEEEECCGGGHHHH---HHHT--TC
T ss_pred             CCCCEEEEecCCCcHHHHHHHhcC-C-CCeEEEeechHHHHHHHHHhhcccc-ccccchhHHHhhHHHH---HHHc--CC
Confidence            334555667889999999998876 3 4599999999998888887776654 4899999988775433   2221  13


Q ss_pred             CCccEEEEccccCC
Q 044010          124 GRLDHLVNNAGISS  137 (248)
Q Consensus       124 g~id~vv~~ag~~~  137 (248)
                      +++|.++.-.|+.+
T Consensus        94 ~~vdgIl~DlGvSs  107 (192)
T d1m6ya2          94 EKVDGILMDLGVST  107 (192)
T ss_dssp             SCEEEEEEECSCCH
T ss_pred             CCcceeeeccchhH
Confidence            58999999988753

>d1mo9a2 c.3.1.5 (A:193-313) NADH-dependent 2-ketopropyl coenzyme M oxidoreductase/carboxylase {Xanthobacter sp., py2 [TaxId: 35809]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: FAD/NAD-linked reductases, N-terminal and central domains
domain: NADH-dependent 2-ketopropyl coenzyme M oxidoreductase/carboxylase
species: Xanthobacter sp., py2 [TaxId: 35809]

Probab=92.81  E-value=0.11  Score=35.29  Aligned_cols=38  Identities=18%  Similarity=0.267  Sum_probs=32.6

Q ss_pred             CCCCCEEEEcCCCChHHHHHHHHHHHcCCeEEEEeCCcc
Q 044010           44 DVSGKVVIITGASSGIGEHLAYEYARRGACLALCARREK   82 (248)
Q Consensus        44 ~~~~k~~lVtGg~~gIG~aia~~l~~~G~~V~l~~r~~~   82 (248)
                      ...+|.++|.|| |-+|..+|..|++.|.+|.++.|.+.
T Consensus        19 ~~~~~~vvVvGg-G~ig~E~A~~l~~~g~~vt~i~~~~~   56 (121)
T d1mo9a2          19 YEPGSTVVVVGG-SKTAVEYGCFFNATGRRTVMLVRTEP   56 (121)
T ss_dssp             SCCCSEEEEECC-SHHHHHHHHHHHHTTCEEEEECSSCT
T ss_pred             hCCCCEEEEECC-CHHHHHHHHHHHhcchhheEeeccch
Confidence            345789998877 89999999999999999999998653

>d2b78a2 c.66.1.51 (A:69-385) Hypothetical protein SMu776, middle and C-terminal domains {Streptococcus mutans [TaxId: 1309]}

class: Alpha and beta proteins (a/b)
fold: S-adenosyl-L-methionine-dependent methyltransferases
superfamily: S-adenosyl-L-methionine-dependent methyltransferases
family: hypothetical RNA methyltransferase
domain: Hypothetical protein SMu776, middle and C-terminal domains
species: Streptococcus mutans [TaxId: 1309]

Probab=92.46  E-value=2  Score=34.13  Aligned_cols=119  Identities=14%  Similarity=0.058  Sum_probs=70.3

Q ss_pred             CCCCEEEEc-CCCChHHHHHHHHHHHcCC-eEEEEeCCcchHHHHHHHHHhhC--CCcEEEEEccCCCHHHHHHHHHHHH
Q 044010           45 VSGKVVIIT-GASSGIGEHLAYEYARRGA-CLALCARREKSLEEVADTAREIG--SPDVITIRADVSKVDDCRSLVEETM  120 (248)
Q Consensus        45 ~~~k~~lVt-Gg~~gIG~aia~~l~~~G~-~V~l~~r~~~~~~~~~~~l~~~~--~~~v~~~~~D~~~~~~~~~~~~~~~  120 (248)
                      -+|+++|=. .++||++.+    ++..|+ +|+.++.++...+.+.+.++..+  ..++.++..|+-      +.++...
T Consensus       143 ~~g~~VLdlf~~~G~~sl~----aa~~ga~~V~~vD~s~~a~~~a~~N~~~n~l~~~~~~~i~~d~~------~~l~~~~  212 (317)
T d2b78a2         143 AAGKTVLNLFSYTAAFSVA----AAMGGAMATTSVDLAKRSRALSLAHFEANHLDMANHQLVVMDVF------DYFKYAR  212 (317)
T ss_dssp             TBTCEEEEETCTTTHHHHH----HHHTTBSEEEEEESCTTHHHHHHHHHHHTTCCCTTEEEEESCHH------HHHHHHH
T ss_pred             hCCCceeecCCCCcHHHHH----HHhCCCceEEEecCCHHHHHHHHHHHHHhcccCcceEEEEccHH------HHHHHHH
Confidence            357877744 455666654    345777 79999999988888887776544  346888988873      3333444


Q ss_pred             hHcCCccEEEEccccCCcccccccCChHHHHHHHHhhhHHHHHHHHHHhhhhhhcCCeEEEEcCcc
Q 044010          121 NHFGRLDHLVNNAGISSVALFEDIVNITDFKQIMNINFWGSVYTTRFAVPHLRYTKGKIVVLSSAA  186 (248)
Q Consensus       121 ~~~g~id~vv~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~g~iV~isS~~  186 (248)
                      ++..++|++|.......+.+... .+   ..       .....+.+.+.+.++ .+| ++..+|+.
T Consensus       213 ~~~~~fD~Ii~DPP~f~~~~~~~-~~---~~-------~~~~~L~~~a~~ll~-pgG-~l~~~scs  265 (317)
T d2b78a2         213 RHHLTYDIIIIDPPSFARNKKEV-FS---VS-------KDYHKLIRQGLEILS-ENG-LIIASTNA  265 (317)
T ss_dssp             HTTCCEEEEEECCCCC-----CC-CC---HH-------HHHHHHHHHHHHTEE-EEE-EEEEEECC
T ss_pred             hhcCCCCEEEEcChhhccchhHH-HH---HH-------HHHHHHHHHHHHHcC-CCC-EEEEEeCC
Confidence            45568999999976443322111 11   11       122345666666664 344 55555544

>d1seza1 c.3.1.2 (A:13-329,A:442-497) Protoporphyrinogen oxidase {Tobacco (Nicotiana tabacum) [TaxId: 4097]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: FAD-linked reductases, N-terminal domain
domain: Protoporphyrinogen oxidase
species: Tobacco (Nicotiana tabacum) [TaxId: 4097]

Probab=92.46  E-value=0.07  Score=41.22  Aligned_cols=34  Identities=24%  Similarity=0.277  Sum_probs=28.7

Q ss_pred             CCEEEEcCCCChHHHHHHHHHHHcCCeEEEEeCCc
Q 044010           47 GKVVIITGASSGIGEHLAYEYARRGACLALCARRE   81 (248)
Q Consensus        47 ~k~~lVtGg~~gIG~aia~~l~~~G~~V~l~~r~~   81 (248)
                      +|+|+|.|| |-=|...|..|+++|++|.+..++.
T Consensus         1 ~KkV~IIGa-G~aGL~aA~~La~~G~~V~vlE~~~   34 (373)
T d1seza1           1 AKRVAVIGA-GVSGLAAAYKLKIHGLNVTVFEAEG   34 (373)
T ss_dssp             CCEEEEECC-SHHHHHHHHHHHTTSCEEEEECSSS
T ss_pred             CCEEEEECc-CHHHHHHHHHHHhCCCCEEEEeCCC
Confidence            578888877 6667888999999999999998754

>d1qp8a1 c.2.1.4 (A:83-263) Putative formate dehydrogenase {Archaeon Pyrobaculum aerophilum [TaxId: 13773]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Formate/glycerate dehydrogenases, NAD-domain
domain: Putative formate dehydrogenase
species: Archaeon Pyrobaculum aerophilum [TaxId: 13773]

Probab=92.38  E-value=0.18  Score=37.14  Aligned_cols=38  Identities=26%  Similarity=0.299  Sum_probs=34.0

Q ss_pred             CCCCCEEEEcCCCChHHHHHHHHHHHcCCeEEEEeCCcc
Q 044010           44 DVSGKVVIITGASSGIGEHLAYEYARRGACLALCARREK   82 (248)
Q Consensus        44 ~~~~k~~lVtGg~~gIG~aia~~l~~~G~~V~l~~r~~~   82 (248)
                      .+.||++.|.|. |.||+.+++.+...|++|...+|...
T Consensus        39 ~l~gk~vgIiG~-G~IG~~va~~l~~~g~~v~~~d~~~~   76 (181)
T d1qp8a1          39 LIQGEKVAVLGL-GEIGTRVGKILAALGAQVRGFSRTPK   76 (181)
T ss_dssp             CCTTCEEEEESC-STHHHHHHHHHHHTTCEEEEECSSCC
T ss_pred             cccCceEEEecc-ccccccceeeeecccccccccccccc
Confidence            589999999987 67999999999999999999998753

>d1i36a2 c.2.1.6 (A:1-152) Conserved hypothetical protein MTH1747 {Archaeon Methanobacterium thermoautotrophicum [TaxId: 145262]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: 6-phosphogluconate dehydrogenase-like, N-terminal domain
domain: Conserved hypothetical protein MTH1747
species: Archaeon Methanobacterium thermoautotrophicum [TaxId: 145262]

Probab=92.33  E-value=0.11  Score=36.87  Aligned_cols=36  Identities=14%  Similarity=0.086  Sum_probs=28.9

Q ss_pred             EEEcCCCChHHHHHHHHHHHcCCeEEEEeCCcchHHH
Q 044010           50 VIITGASSGIGEHLAYEYARRGACLALCARREKSLEE   86 (248)
Q Consensus        50 ~lVtGg~~gIG~aia~~l~~~G~~V~l~~r~~~~~~~   86 (248)
                      +-|. |.|-+|.++|+.|+++|++|.+.+++..+...
T Consensus         3 IgiI-G~G~mG~~ia~~l~~~g~~v~~~~~~~~~~~~   38 (152)
T d1i36a2           3 VGFI-GFGEVAQTLASRLRSRGVEVVTSLEGRSPSTI   38 (152)
T ss_dssp             EEEE-SCSHHHHHHHHHHHHTTCEEEECCTTCCHHHH
T ss_pred             EEEE-cHHHHHHHHHHHHHHCCCeEEEEcCchhHHHH
Confidence            3444 55999999999999999999998887765443

>d1wzna1 c.66.1.43 (A:1-251) Hypothetical methyltransferase PH1305 {Archaeon Pyrococcus horikoshii [TaxId: 53953]}

class: Alpha and beta proteins (a/b)
fold: S-adenosyl-L-methionine-dependent methyltransferases
superfamily: S-adenosyl-L-methionine-dependent methyltransferases
family: CAC2371-like
domain: Hypothetical methyltransferase PH1305
species: Archaeon Pyrococcus horikoshii [TaxId: 53953]

Probab=92.24  E-value=0.17  Score=38.57  Aligned_cols=74  Identities=18%  Similarity=0.116  Sum_probs=56.1

Q ss_pred             CCCCEEEEcCCCChHHHHHHHHHHHcCCeEEEEeCCcchHHHHHHHHHhhCCCcEEEEEccCCCHHHHHHHHHHHHhHcC
Q 044010           45 VSGKVVIITGASSGIGEHLAYEYARRGACLALCARREKSLEEVADTAREIGSPDVITIRADVSKVDDCRSLVEETMNHFG  124 (248)
Q Consensus        45 ~~~k~~lVtGg~~gIG~aia~~l~~~G~~V~l~~r~~~~~~~~~~~l~~~~~~~v~~~~~D~~~~~~~~~~~~~~~~~~g  124 (248)
                      -+++++|=.|++.|   ..+..|+++|++|+.++.++...+.+.+..++.+. ++.++..|+.+.+-           -+
T Consensus        40 ~~~~~iLDiGcGtG---~~~~~l~~~~~~v~gvD~s~~mi~~a~~~~~~~~~-~i~~~~~d~~~l~~-----------~~  104 (251)
T d1wzna1          40 REVRRVLDLACGTG---IPTLELAERGYEVVGLDLHEEMLRVARRKAKERNL-KIEFLQGDVLEIAF-----------KN  104 (251)
T ss_dssp             SCCCEEEEETCTTC---HHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHTTC-CCEEEESCGGGCCC-----------CS
T ss_pred             CCCCEEEEeCCCCC---ccchhhcccceEEEEEeeccccccccccccccccc-cchheehhhhhccc-----------cc
Confidence            35678999999876   34567888999999999999888888777776554 68899999866421           13


Q ss_pred             CccEEEEcc
Q 044010          125 RLDHLVNNA  133 (248)
Q Consensus       125 ~id~vv~~a  133 (248)
                      ++|.++..-
T Consensus       105 ~fD~I~~~~  113 (251)
T d1wzna1         105 EFDAVTMFF  113 (251)
T ss_dssp             CEEEEEECS
T ss_pred             ccchHhhhh
Confidence            789888753

>d1h6va2 c.3.1.5 (A:171-292) Mammalian thioredoxin reductase {Rat (Rattus norvegicus) [TaxId: 10116]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: FAD/NAD-linked reductases, N-terminal and central domains
domain: Mammalian thioredoxin reductase
species: Rat (Rattus norvegicus) [TaxId: 10116]

Probab=92.23  E-value=0.2  Score=34.26  Aligned_cols=32  Identities=22%  Similarity=0.144  Sum_probs=27.7

Q ss_pred             CEEEEcCCCChHHHHHHHHHHHcCCeEEEEeCC
Q 044010           48 KVVIITGASSGIGEHLAYEYARRGACLALCARR   80 (248)
Q Consensus        48 k~~lVtGg~~gIG~aia~~l~~~G~~V~l~~r~   80 (248)
                      |.++|.|| |-||..+|..|.+.|.+|.++.|+
T Consensus        21 ~~vvIIGg-G~iG~E~A~~l~~lG~~Vtii~~~   52 (122)
T d1h6va2          21 GKTLVVGA-SYVALECAGFLAGIGLDVTVMVRS   52 (122)
T ss_dssp             CSEEEECC-SHHHHHHHHHHHHTTCCEEEEESS
T ss_pred             CeEEEECC-CccHHHHHHHHhhcCCeEEEEEec
Confidence            45777766 899999999999999999999875

>d1q1ra2 c.3.1.5 (A:115-247) Putidaredoxin reductase {Pseudomonas putida [TaxId: 303]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: FAD/NAD-linked reductases, N-terminal and central domains
domain: Putidaredoxin reductase
species: Pseudomonas putida [TaxId: 303]

Probab=92.21  E-value=0.12  Score=36.11  Aligned_cols=36  Identities=14%  Similarity=0.233  Sum_probs=31.4

Q ss_pred             CCCEEEEcCCCChHHHHHHHHHHHcCCeEEEEeCCcc
Q 044010           46 SGKVVIITGASSGIGEHLAYEYARRGACLALCARREK   82 (248)
Q Consensus        46 ~~k~~lVtGg~~gIG~aia~~l~~~G~~V~l~~r~~~   82 (248)
                      ++|+++|.|| |-+|..+|..|.+.|.+|.++.+.+.
T Consensus        34 ~~k~v~VIGg-G~iG~E~A~~l~~~g~~Vtvie~~~~   69 (133)
T d1q1ra2          34 ADNRLVVIGG-GYIGLEVAATAIKANMHVTLLDTAAR   69 (133)
T ss_dssp             TTCEEEEECC-SHHHHHHHHHHHHTTCEEEEECSSSS
T ss_pred             cCCEEEEECC-chHHHHHHHHHHhhCcceeeeeeccc
Confidence            4678888876 89999999999999999999998653

>d1vl5a_ c.66.1.41 (A:) Hypothetical protein BH2331 {Bacillus halodurans [TaxId: 86665]}

class: Alpha and beta proteins (a/b)
fold: S-adenosyl-L-methionine-dependent methyltransferases
superfamily: S-adenosyl-L-methionine-dependent methyltransferases
family: UbiE/COQ5-like
domain: Hypothetical protein BH2331
species: Bacillus halodurans [TaxId: 86665]

Probab=91.99  E-value=0.26  Score=36.97  Aligned_cols=77  Identities=13%  Similarity=0.066  Sum_probs=56.6

Q ss_pred             CCEEEEcCCCChHHHHHHHHHHHcCCeEEEEeCCcchHHHHHHHHHhhCCCcEEEEEccCCCHHHHHHHHHHHHhHcCCc
Q 044010           47 GKVVIITGASSGIGEHLAYEYARRGACLALCARREKSLEEVADTAREIGSPDVITIRADVSKVDDCRSLVEETMNHFGRL  126 (248)
Q Consensus        47 ~k~~lVtGg~~gIG~aia~~l~~~G~~V~l~~r~~~~~~~~~~~l~~~~~~~v~~~~~D~~~~~~~~~~~~~~~~~~g~i  126 (248)
                      ++++|=.|++.|.-   +..++++|++|+.++-+++..+.+.+.+...+..++.++..|..+.. +         .-+.+
T Consensus        16 ~~rVLDiGcG~G~~---~~~l~~~~~~v~gvD~s~~~i~~A~~~~~~~~~~~i~~~~~d~~~l~-~---------~~~~f   82 (231)
T d1vl5a_          16 NEEVLDVATGGGHV---ANAFAPFVKKVVAFDLTEDILKVARAFIEGNGHQQVEYVQGDAEQMP-F---------TDERF   82 (231)
T ss_dssp             CCEEEEETCTTCHH---HHHHGGGSSEEEEEESCHHHHHHHHHHHHHTTCCSEEEEECCC-CCC-S---------CTTCE
T ss_pred             cCEEEEecccCcHH---HHHHHHhCCEEEEEECCHHHHhhhhhccccccccccccccccccccc-c---------ccccc
Confidence            57899999887743   35577889999999999888887777777766668899999987752 1         11478


Q ss_pred             cEEEEccccC
Q 044010          127 DHLVNNAGIS  136 (248)
Q Consensus       127 d~vv~~ag~~  136 (248)
                      |+++......
T Consensus        83 D~v~~~~~l~   92 (231)
T d1vl5a_          83 HIVTCRIAAH   92 (231)
T ss_dssp             EEEEEESCGG
T ss_pred             cccccccccc
Confidence            8887776543

>d1l7da1 c.2.1.4 (A:144-326) Nicotinamide nucleotide transhydrogenase dI component {Rhodospirillum rubrum [TaxId: 1085]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Formate/glycerate dehydrogenases, NAD-domain
domain: Nicotinamide nucleotide transhydrogenase dI component
species: Rhodospirillum rubrum [TaxId: 1085]

Probab=91.93  E-value=0.56  Score=34.47  Aligned_cols=87  Identities=18%  Similarity=0.205  Sum_probs=53.1

Q ss_pred             CCCEEEEcCCCChHHHHHHHHHHHcCCeEEEEeCCcchHHHHHHHHHhhCCCcEEEEEccCCCHHH--------------
Q 044010           46 SGKVVIITGASSGIGEHLAYEYARRGACLALCARREKSLEEVADTAREIGSPDVITIRADVSKVDD--------------  111 (248)
Q Consensus        46 ~~k~~lVtGg~~gIG~aia~~l~~~G~~V~l~~r~~~~~~~~~~~l~~~~~~~v~~~~~D~~~~~~--------------  111 (248)
                      +.-.++|.|+ |-.|.+.++-...-|++|.+.|.+.+++++..+    .+..   ++..+..+.+.              
T Consensus        28 ~pa~VvViGa-GvaG~~Aa~~A~~lGA~V~v~D~~~~~~~~l~~----l~~~---~i~~~~~~~~~~~~~~gyA~~~s~~   99 (183)
T d1l7da1          28 PPARVLVFGV-GVAGLQAIATAKRLGAVVMATDVRAATKEQVES----LGGK---FITVDDEAMKTAETAGGYAKEMGEE   99 (183)
T ss_dssp             CCCEEEEECC-SHHHHHHHHHHHHTTCEEEEECSCSTTHHHHHH----TTCE---ECCC---------------------
T ss_pred             CCcEEEEEcC-cHHHHHHHHHHHHcCCEEEEEeccHHHHHHHHH----hhcc---eEEEeccccccccccccchhhcCHH
Confidence            4457888877 678888888888899999999999987665543    3321   12111111111              


Q ss_pred             -HHHHHHHHHhHcCCccEEEEccccCCccc
Q 044010          112 -CRSLVEETMNHFGRLDHLVNNAGISSVAL  140 (248)
Q Consensus       112 -~~~~~~~~~~~~g~id~vv~~ag~~~~~~  140 (248)
                       .++--+.+.+...+-|++|-++-+...+.
T Consensus       100 ~~~~~~~~l~~~l~~aDlVI~talipG~~a  129 (183)
T d1l7da1         100 FRKKQAEAVLKELVKTDIAITTALIPGKPA  129 (183)
T ss_dssp             --CCHHHHHHHHHTTCSEEEECCCCTTSCC
T ss_pred             HHHHHHHHHHHHHHhhhhheeeeecCCccc
Confidence             11122233334458999999998765443

>d1obba1 c.2.1.5 (A:2-172) Alpha-glucosidase AglA {Thermotoga maritima [TaxId: 2336]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: LDH N-terminal domain-like
domain: Alpha-glucosidase AglA
species: Thermotoga maritima [TaxId: 2336]

Probab=91.77  E-value=0.13  Score=37.53  Aligned_cols=77  Identities=17%  Similarity=0.216  Sum_probs=43.9

Q ss_pred             EEEEcCCCChHH--HHHHHHHHHc----CCeEEEEeCCcchHHHHHHHHHh---hCCCcEEEEEccCCCHHHHHHHHHHH
Q 044010           49 VVIITGASSGIG--EHLAYEYARR----GACLALCARREKSLEEVADTARE---IGSPDVITIRADVSKVDDCRSLVEET  119 (248)
Q Consensus        49 ~~lVtGg~~gIG--~aia~~l~~~----G~~V~l~~r~~~~~~~~~~~l~~---~~~~~v~~~~~D~~~~~~~~~~~~~~  119 (248)
                      ++.|.|| |.+|  .++...++..    +.++++.+.++++++.....+++   ..+....+...  +|   .++++   
T Consensus         4 KI~iIGa-Gsvg~t~~~~~~l~~~~~l~~~eivL~Did~~~~~~~~~~~~~~~~~~~~~~~i~~~--td---~~eaL---   74 (171)
T d1obba1           4 KIGIIGA-GSAVFSLRLVSDLCKTPGLSGSTVTLMDIDEERLDAILTIAKKYVEEVGADLKFEKT--MN---LDDVI---   74 (171)
T ss_dssp             EEEEETT-TCHHHHHHHHHHHHTCGGGTTCEEEEECSCHHHHHHHHHHHHHHHHHTTCCCEEEEE--SC---HHHHH---
T ss_pred             EEEEECC-CHHHhHHHHHHHHHhccccCCCEEEEEeCCchHHHHHHHHHHHHHHhcCCCeEEEEe--CC---hhhcc---
Confidence            4556665 4444  4555556643    45999999999877654443332   22223332221  12   22222   


Q ss_pred             HhHcCCccEEEEccccCCc
Q 044010          120 MNHFGRLDHLVNNAGISSV  138 (248)
Q Consensus       120 ~~~~g~id~vv~~ag~~~~  138 (248)
                          ...|++++.++....
T Consensus        75 ----~dad~Vv~~~~~g~~   89 (171)
T d1obba1          75 ----IDADFVINTAMVGGH   89 (171)
T ss_dssp             ----TTCSEEEECCCTTHH
T ss_pred             ----cCCCeEeeecccccc
Confidence                379999999987643

>d1l3ia_ c.66.1.22 (A:) Precorrin-6Y methyltransferase (CbiT) {Archaeon Methanobacterium thermoautotrophicum [TaxId: 145262]}

class: Alpha and beta proteins (a/b)
fold: S-adenosyl-L-methionine-dependent methyltransferases
superfamily: S-adenosyl-L-methionine-dependent methyltransferases
family: Precorrin-6Y methyltransferase (CbiT)
domain: Precorrin-6Y methyltransferase (CbiT)
species: Archaeon Methanobacterium thermoautotrophicum [TaxId: 145262]

Probab=91.74  E-value=0.6  Score=33.99  Aligned_cols=75  Identities=16%  Similarity=0.231  Sum_probs=54.3

Q ss_pred             CCCEEEEcCCCChHHHHHHHHHHHcCCeEEEEeCCcchHHHHHHHHHhhCC-CcEEEEEccCCCHHHHHHHHHHHHhHcC
Q 044010           46 SGKVVIITGASSGIGEHLAYEYARRGACLALCARREKSLEEVADTAREIGS-PDVITIRADVSKVDDCRSLVEETMNHFG  124 (248)
Q Consensus        46 ~~k~~lVtGg~~gIG~aia~~l~~~G~~V~l~~r~~~~~~~~~~~l~~~~~-~~v~~~~~D~~~~~~~~~~~~~~~~~~g  124 (248)
                      +|.++|=.|++.|   .++..+++.+.+|+.++.+++..+.+.+.+++.+- .+++++++|..+          .....+
T Consensus        33 ~g~~VLDiGcGsG---~~s~~lA~~~~~V~avD~~~~~l~~a~~n~~~~gl~~~v~~~~gda~~----------~~~~~~   99 (186)
T d1l3ia_          33 KNDVAVDVGCGTG---GVTLELAGRVRRVYAIDRNPEAISTTEMNLQRHGLGDNVTLMEGDAPE----------ALCKIP   99 (186)
T ss_dssp             TTCEEEEESCTTS---HHHHHHHTTSSEEEEEESCHHHHHHHHHHHHHTTCCTTEEEEESCHHH----------HHTTSC
T ss_pred             CCCEEEEEECCeE---cccccccccceEEEEecCCHHHHHHHHHHHHHcCCCcceEEEECchhh----------cccccC
Confidence            5778888888765   22334566777999999999999998888887763 478899887421          123345


Q ss_pred             CccEEEEcc
Q 044010          125 RLDHLVNNA  133 (248)
Q Consensus       125 ~id~vv~~a  133 (248)
                      .+|.++.+.
T Consensus       100 ~~D~v~~~~  108 (186)
T d1l3ia_         100 DIDIAVVGG  108 (186)
T ss_dssp             CEEEEEESC
T ss_pred             CcCEEEEeC
Confidence            899998764

>d1a9xa3 c.30.1.1 (A:1-127) Carbamoyl phosphate synthetase (CPS), large subunit PreATP-grasp domains {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: PreATP-grasp domain
superfamily: PreATP-grasp domain
family: BC N-terminal domain-like
domain: Carbamoyl phosphate synthetase (CPS), large subunit PreATP-grasp domains
species: Escherichia coli [TaxId: 562]

Probab=91.67  E-value=0.24  Score=34.31  Aligned_cols=81  Identities=14%  Similarity=0.170  Sum_probs=53.5

Q ss_pred             ccCCCCCEEEEcCCCC-h---------HHHHHHHHHHHcCCeEEEEeCCcchHHHHHHHHHhhCCCcEEEEEccCCCHHH
Q 044010           42 SEDVSGKVVIITGASS-G---------IGEHLAYEYARRGACLALCARREKSLEEVADTAREIGSPDVITIRADVSKVDD  111 (248)
Q Consensus        42 ~~~~~~k~~lVtGg~~-g---------IG~aia~~l~~~G~~V~l~~r~~~~~~~~~~~l~~~~~~~v~~~~~D~~~~~~  111 (248)
                      +.+-..|++||.|++. -         -+.+.++.|.++|++++++..|++......+    .. ++   +-.+.-..++
T Consensus         2 p~~~~~kkvlilGsGp~~IGq~~EfDy~~~~a~~alke~g~~~iliN~NP~TVstd~d----~a-D~---lYfePlt~e~   73 (127)
T d1a9xa3           2 PKRTDIKSILILGAGPIVIGQACEFDYSGAQACKALREEGYRVINVNSNPATIMTDPE----MA-DA---TYIEPIHWEV   73 (127)
T ss_dssp             CCCSSCCEEEEECCCSCBTTBCTHHHHHHHHHHHHHHHHTCEEEEECSCTTCGGGCGG----GS-SE---EECSCCCHHH
T ss_pred             CCCCCCCEEEEECCCcCcccccchhHHHHHHHHHHHHHcCCeEEEecCchHhhhcChh----hc-ce---eeeecCCHHH
Confidence            3455678999999863 2         3467788898999999999998864221111    01 12   2234455677


Q ss_pred             HHHHHHHHHhHcCCccEEEEcccc
Q 044010          112 CRSLVEETMNHFGRLDHLVNNAGI  135 (248)
Q Consensus       112 ~~~~~~~~~~~~g~id~vv~~ag~  135 (248)
                      +.+.++.     .++|.++-..|.
T Consensus        74 v~~Ii~~-----E~pd~il~~~GG   92 (127)
T d1a9xa3          74 VRKIIEK-----ERPDAVLPTMGG   92 (127)
T ss_dssp             HHHHHHH-----HCCSEEECSSSH
T ss_pred             HHHHHHH-----hCcCCeEEEeee
Confidence            7777765     289999877764

>d2i6ga1 c.66.1.44 (A:1-198) Putative methyltransferase TehB {Salmonella typhimurium [TaxId: 90371]}

class: Alpha and beta proteins (a/b)
fold: S-adenosyl-L-methionine-dependent methyltransferases
superfamily: S-adenosyl-L-methionine-dependent methyltransferases
family: TehB-like
domain: Putative methyltransferase TehB
species: Salmonella typhimurium [TaxId: 90371]

Probab=91.63  E-value=0.49  Score=34.75  Aligned_cols=78  Identities=14%  Similarity=0.133  Sum_probs=57.3

Q ss_pred             CCCCCEEEEcCCCChHHHHHHHHHHHcCCeEEEEeCCcchHHHHHHHHHhhCCCcEEEEEccCCCHHHHHHHHHHHHhHc
Q 044010           44 DVSGKVVIITGASSGIGEHLAYEYARRGACLALCARREKSLEEVADTAREIGSPDVITIRADVSKVDDCRSLVEETMNHF  123 (248)
Q Consensus        44 ~~~~k~~lVtGg~~gIG~aia~~l~~~G~~V~l~~r~~~~~~~~~~~l~~~~~~~v~~~~~D~~~~~~~~~~~~~~~~~~  123 (248)
                      .++++++|=.|++.|.   .+..|+++|++|+.++.++...+.+.+..++.+-..+.+...|+.+..-           -
T Consensus        28 ~~~~grvLDiGcG~G~---~~~~la~~g~~v~gvD~s~~~l~~a~~~~~~~~~~~~~~~~~d~~~~~~-----------~   93 (198)
T d2i6ga1          28 VVAPGRTLDLGCGNGR---NSLYLAANGYDVTAWDKNPASMANLERIKAAEGLDNLQTDLVDLNTLTF-----------D   93 (198)
T ss_dssp             TSCSCEEEEETCTTSH---HHHHHHHTTCEEEEEESCHHHHHHHHHHHHHTTCTTEEEEECCTTTCCC-----------C
T ss_pred             cCCCCcEEEECCCCCH---HHHHHHHHhhhhccccCcHHHHHHHHHHhhhccccchhhhheecccccc-----------c
Confidence            4566789999986543   4557788999999999998888877777666665567888888876531           1


Q ss_pred             CCccEEEEcccc
Q 044010          124 GRLDHLVNNAGI  135 (248)
Q Consensus       124 g~id~vv~~ag~  135 (248)
                      +.+|+++.+...
T Consensus        94 ~~fD~I~~~~~~  105 (198)
T d2i6ga1          94 GEYDFILSTVVM  105 (198)
T ss_dssp             CCEEEEEEESCG
T ss_pred             ccccEEEEeeee
Confidence            478999876543

>d1ryia1 c.3.1.2 (A:1-218,A:307-364) Glycine oxidase ThiO {Bacillus sp. [TaxId: 1409]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: FAD-linked reductases, N-terminal domain
domain: Glycine oxidase ThiO
species: Bacillus sp. [TaxId: 1409]

Probab=91.48  E-value=0.091  Score=40.71  Aligned_cols=31  Identities=26%  Similarity=0.385  Sum_probs=27.7

Q ss_pred             EEEcCCCChHHHHHHHHHHHcCCeEEEEeCCc
Q 044010           50 VIITGASSGIGEHLAYEYARRGACLALCARRE   81 (248)
Q Consensus        50 ~lVtGg~~gIG~aia~~l~~~G~~V~l~~r~~   81 (248)
                      ++|.|| |-.|.++|..|+++|.+|+++.++.
T Consensus         7 vvIIGa-Gi~Gls~A~~La~~G~~V~vlE~~~   37 (276)
T d1ryia1           7 AVVIGG-GIIGSAIAYYLAKENKNTALFESGT   37 (276)
T ss_dssp             EEEECC-SHHHHHHHHHHHHTTCCEEEECSSS
T ss_pred             EEEECc-CHHHHHHHHHHHHCCCcEEEEeCCC
Confidence            677766 8999999999999999999999865

>d2nxca1 c.66.1.39 (A:1-254) PrmA-like protein TTHA0656 (TT0836) {Thermus thermophilus [TaxId: 274]}

class: Alpha and beta proteins (a/b)
fold: S-adenosyl-L-methionine-dependent methyltransferases
superfamily: S-adenosyl-L-methionine-dependent methyltransferases
family: Ribosomal protein L11 methyltransferase PrmA
domain: PrmA-like protein TTHA0656 (TT0836)
species: Thermus thermophilus [TaxId: 274]

Probab=91.46  E-value=0.57  Score=36.30  Aligned_cols=74  Identities=22%  Similarity=0.198  Sum_probs=53.7

Q ss_pred             CCCCCEEEEcCCCChHHHHHHHHHHHcCCeEEEEeCCcchHHHHHHHHHhhCCCcEEEEEccCCCHHHHHHHHHHHHhHc
Q 044010           44 DVSGKVVIITGASSGIGEHLAYEYARRGACLALCARREKSLEEVADTAREIGSPDVITIRADVSKVDDCRSLVEETMNHF  123 (248)
Q Consensus        44 ~~~~k~~lVtGg~~gIG~aia~~l~~~G~~V~l~~r~~~~~~~~~~~l~~~~~~~v~~~~~D~~~~~~~~~~~~~~~~~~  123 (248)
                      ..+|+++|=.|+++|+-   +..+++.|++|+.++.++...+.+.+..+..+- ...++..|+.+      .     ...
T Consensus       118 ~~~g~~VLDiGcGsG~l---~i~aa~~g~~V~gvDis~~av~~A~~na~~n~~-~~~~~~~d~~~------~-----~~~  182 (254)
T d2nxca1         118 LRPGDKVLDLGTGSGVL---AIAAEKLGGKALGVDIDPMVLPQAEANAKRNGV-RPRFLEGSLEA------A-----LPF  182 (254)
T ss_dssp             CCTTCEEEEETCTTSHH---HHHHHHTTCEEEEEESCGGGHHHHHHHHHHTTC-CCEEEESCHHH------H-----GGG
T ss_pred             cCccCEEEEcccchhHH---HHHHHhcCCEEEEEECChHHHHHHHHHHHHcCC-ceeEEeccccc------c-----ccc
Confidence            45789999999988862   335667899999999999988888887766553 55667666421      1     123


Q ss_pred             CCccEEEEc
Q 044010          124 GRLDHLVNN  132 (248)
Q Consensus       124 g~id~vv~~  132 (248)
                      +++|+++.|
T Consensus       183 ~~fD~V~an  191 (254)
T d2nxca1         183 GPFDLLVAN  191 (254)
T ss_dssp             CCEEEEEEE
T ss_pred             cccchhhhc
Confidence            589999877

>d1gtea4 c.4.1.1 (A:184-287,A:441-532) Dihydropyrimidine dehydrogenase, domain 2 {Pig (Sus scrofa) [TaxId: 9823]}

class: Alpha and beta proteins (a/b)
fold: Nucleotide-binding domain
superfamily: Nucleotide-binding domain
family: N-terminal domain of adrenodoxin reductase-like
domain: Dihydropyrimidine dehydrogenase, domain 2
species: Pig (Sus scrofa) [TaxId: 9823]

Probab=91.40  E-value=0.1  Score=38.18  Aligned_cols=35  Identities=20%  Similarity=0.182  Sum_probs=29.1

Q ss_pred             CCEEEEcCCCChHHHHHHHHHHHcCC-eEEEEeCCcc
Q 044010           47 GKVVIITGASSGIGEHLAYEYARRGA-CLALCARREK   82 (248)
Q Consensus        47 ~k~~lVtGg~~gIG~aia~~l~~~G~-~V~l~~r~~~   82 (248)
                      +|+++|.|| |-.|...|..|+++|+ +|.+..|...
T Consensus         4 ~~kVaIIGa-GpaGl~aA~~l~~~G~~~V~v~E~~~~   39 (196)
T d1gtea4           4 SAKIALLGA-GPASISCASFLARLGYSDITIFEKQEY   39 (196)
T ss_dssp             GCCEEEECC-SHHHHHHHHHHHHTTCCCEEEEESSSS
T ss_pred             CCEEEEECC-hHHHHHHHHHHHHCCCCeEEEEEecCc
Confidence            567888876 7899999999999999 5988888653

>d1u0sy_ c.23.1.1 (Y:) CheY protein {Thermotoga maritima [TaxId: 2336]}

class: Alpha and beta proteins (a/b)
fold: Flavodoxin-like
superfamily: CheY-like
family: CheY-related
domain: CheY protein
species: Thermotoga maritima [TaxId: 2336]

Probab=91.35  E-value=1.3  Score=29.59  Aligned_cols=81  Identities=19%  Similarity=0.220  Sum_probs=53.7

Q ss_pred             CCEEEEcCCCChHHHHHHHHHHHcCCeEEEEeCCcchHHHHHHHHHhhCCCcEEEEEccCCCHHHHHHHHHHHHhHcCCc
Q 044010           47 GKVVIITGASSGIGEHLAYEYARRGACLALCARREKSLEEVADTAREIGSPDVITIRADVSKVDDCRSLVEETMNHFGRL  126 (248)
Q Consensus        47 ~k~~lVtGg~~gIG~aia~~l~~~G~~V~l~~r~~~~~~~~~~~l~~~~~~~v~~~~~D~~~~~~~~~~~~~~~~~~g~i  126 (248)
                      ||++||.=....+...+...|-+.|++|+....+.   +++.+.+++... .+.+.-.+.-+.+.+ ++++++++....+
T Consensus         1 GkrILivDD~~~~~~~l~~~L~~~g~~v~~~a~~~---~~al~~~~~~~~-dliilD~~mp~~~G~-e~~~~ir~~~~~~   75 (118)
T d1u0sy_           1 GKRVLIVDDAAFMRMMLKDIITKAGYEVAGEATNG---REAVEKYKELKP-DIVTMDITMPEMNGI-DAIKEIMKIDPNA   75 (118)
T ss_dssp             CCEEEEECSCHHHHHHHHHHHHHTTCEEEEEESSH---HHHHHHHHHHCC-SEEEEECSCGGGCHH-HHHHHHHHHCTTC
T ss_pred             CCEEEEEeCCHHHHHHHHHHHHHcCCceEEEECCH---HHHHHHHHhccC-CEEEEecCCCCCCHH-HHHHHHHHhCCCC
Confidence            78899998888888888888888999987655544   344555554433 444444444344333 6777777776677


Q ss_pred             cEEEEc
Q 044010          127 DHLVNN  132 (248)
Q Consensus       127 d~vv~~  132 (248)
                      -+++..
T Consensus        76 pvi~ls   81 (118)
T d1u0sy_          76 KIIVCS   81 (118)
T ss_dssp             CEEEEE
T ss_pred             cEEEEE
Confidence            776655

>d1fcda1 c.3.1.5 (A:1-114,A:256-327) Flavocytochrome c sulfide dehydrogenase, FCSD, flavin-binding subunit {Purple phototrophic bacterium (Chromatium vinosum) [TaxId: 1049]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: FAD/NAD-linked reductases, N-terminal and central domains
domain: Flavocytochrome c sulfide dehydrogenase, FCSD, flavin-binding subunit
species: Purple phototrophic bacterium (Chromatium vinosum) [TaxId: 1049]

Probab=91.32  E-value=0.13  Score=36.66  Aligned_cols=35  Identities=17%  Similarity=0.202  Sum_probs=29.9

Q ss_pred             CCCEEEEcCCCChHHHHHHHHHHHcCC--eEEEEeCCc
Q 044010           46 SGKVVIITGASSGIGEHLAYEYARRGA--CLALCARRE   81 (248)
Q Consensus        46 ~~k~~lVtGg~~gIG~aia~~l~~~G~--~V~l~~r~~   81 (248)
                      +||+++|.|| |-.|..+|..|.+.|.  +|.++.+++
T Consensus         1 ~gkrivIvGg-G~~G~e~A~~l~~~~~~~~Vtlie~~~   37 (186)
T d1fcda1           1 AGRKVVVVGG-GTGGATAAKYIKLADPSIEVTLIEPNT   37 (186)
T ss_dssp             CCCEEEEECC-SHHHHHHHHHHHHHCTTSEEEEECSCS
T ss_pred             CCCcEEEECc-cHHHHHHHHHHHHcCCCCcEEEEECCC
Confidence            5899999988 7889999999999875  788888765

>d1txga2 c.2.1.6 (A:1-180) Glycerol-3- phosphate dehydrogenase {Archaeoglobus fulgidus [TaxId: 2234]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: 6-phosphogluconate dehydrogenase-like, N-terminal domain
domain: Glycerol-3- phosphate dehydrogenase
species: Archaeoglobus fulgidus [TaxId: 2234]

Probab=91.10  E-value=0.11  Score=38.17  Aligned_cols=33  Identities=21%  Similarity=0.335  Sum_probs=28.1

Q ss_pred             EEEEcCCCChHHHHHHHHHHHcCCeEEEEeCCcc
Q 044010           49 VVIITGASSGIGEHLAYEYARRGACLALCARREK   82 (248)
Q Consensus        49 ~~lVtGg~~gIG~aia~~l~~~G~~V~l~~r~~~   82 (248)
                      ++.|.|+ |..|.++|..|++.|++|.+.+|..+
T Consensus         2 kI~ViGa-G~~GtalA~~la~~g~~V~l~~r~~~   34 (180)
T d1txga2           2 IVSILGA-GAMGSALSVPLVDNGNEVRIWGTEFD   34 (180)
T ss_dssp             EEEEESC-CHHHHHHHHHHHHHCCEEEEECCGGG
T ss_pred             EEEEECC-CHHHHHHHHHHHHCCCEEEEEEeccc
Confidence            4566766 89999999999999999999998654

>d2cvza2 c.2.1.6 (A:2-157) Hydroxyisobutyrate dehydrogenase {Thermus thermophilus [TaxId: 274]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: 6-phosphogluconate dehydrogenase-like, N-terminal domain
domain: Hydroxyisobutyrate dehydrogenase
species: Thermus thermophilus [TaxId: 274]

Probab=91.00  E-value=0.34  Score=34.41  Aligned_cols=81  Identities=14%  Similarity=0.077  Sum_probs=49.9

Q ss_pred             EEcCCCChHHHHHHHHHHHcCCeEEEEeCCcchHHHHHHHHHhhCC-----CcEEEEEccCCCHHHHHHHHHHHHhHcCC
Q 044010           51 IITGASSGIGEHLAYEYARRGACLALCARREKSLEEVADTAREIGS-----PDVITIRADVSKVDDCRSLVEETMNHFGR  125 (248)
Q Consensus        51 lVtGg~~gIG~aia~~l~~~G~~V~l~~r~~~~~~~~~~~l~~~~~-----~~v~~~~~D~~~~~~~~~~~~~~~~~~g~  125 (248)
                      -+.| -|-+|.++|++|++.|+.+ +..|+.++.++..++......     .....+...+.+.+.+....+.+.+...+
T Consensus         4 g~IG-lG~MG~~ma~~L~~~g~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~v~~~~~~l~~~~~~   81 (156)
T d2cvza2           4 AFIG-LGAMGYPMAGHLARRFPTL-VWNRTFEKALRHQEEFGSEAVPLERVAEARVIFTCLPTTREVYEVAEALYPYLRE   81 (156)
T ss_dssp             EEEC-CSTTHHHHHHHHHTTSCEE-EECSSTHHHHHHHHHHCCEECCGGGGGGCSEEEECCSSHHHHHHHHHHHTTTCCT
T ss_pred             EEEe-HHHHHHHHHHHHHhCCCEE-EEeCCHHHHHHHHHHcCCcccccccccceeEEEecccchhhhhhhhccccccccc
Confidence            3444 4899999999999888755 567877766665554322110     12333344455666777777777655445


Q ss_pred             ccEEEEcc
Q 044010          126 LDHLVNNA  133 (248)
Q Consensus       126 id~vv~~a  133 (248)
                      -..+|.+.
T Consensus        82 ~~~iid~s   89 (156)
T d2cvza2          82 GTYWVDAT   89 (156)
T ss_dssp             TEEEEECS
T ss_pred             cccccccc
Confidence            55555554

>d1v8ba1 c.2.1.4 (A:235-397) S-adenosylhomocystein hydrolase {Plasmodium falciparum, isolate 3D7 [TaxId: 5833]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Formate/glycerate dehydrogenases, NAD-domain
domain: S-adenosylhomocystein hydrolase
species: Plasmodium falciparum, isolate 3D7 [TaxId: 5833]

Probab=90.94  E-value=0.21  Score=36.19  Aligned_cols=39  Identities=26%  Similarity=0.288  Sum_probs=35.0

Q ss_pred             cCCCCCEEEEcCCCChHHHHHHHHHHHcCCeEEEEeCCcc
Q 044010           43 EDVSGKVVIITGASSGIGEHLAYEYARRGACLALCARREK   82 (248)
Q Consensus        43 ~~~~~k~~lVtGg~~gIG~aia~~l~~~G~~V~l~~r~~~   82 (248)
                      .-+.||+++|.|= |.+|+.+|+++...|++|+++..++-
T Consensus        19 ~~laGk~vvV~GY-G~vGrG~A~~~rg~Ga~V~V~E~DPi   57 (163)
T d1v8ba1          19 FLISGKIVVICGY-GDVGKGCASSMKGLGARVYITEIDPI   57 (163)
T ss_dssp             CCCTTSEEEEECC-SHHHHHHHHHHHHHTCEEEEECSCHH
T ss_pred             ceecCCEEEEecc-cccchhHHHHHHhCCCEEEEEecCch
Confidence            3579999999976 89999999999999999999999874

>d2bzga1 c.66.1.36 (A:17-245) Thiopurine S-methyltransferase {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: S-adenosyl-L-methionine-dependent methyltransferases
superfamily: S-adenosyl-L-methionine-dependent methyltransferases
family: Thiopurine S-methyltransferase
domain: Thiopurine S-methyltransferase
species: Human (Homo sapiens) [TaxId: 9606]

Probab=90.92  E-value=0.17  Score=38.42  Aligned_cols=80  Identities=14%  Similarity=0.150  Sum_probs=55.1

Q ss_pred             CCCCEEEEcCCCChHHHHHHHHHHHcCCeEEEEeCCcchHHHHHHHHHhh-----------------CCCcEEEEEccCC
Q 044010           45 VSGKVVIITGASSGIGEHLAYEYARRGACLALCARREKSLEEVADTAREI-----------------GSPDVITIRADVS  107 (248)
Q Consensus        45 ~~~k~~lVtGg~~gIG~aia~~l~~~G~~V~l~~r~~~~~~~~~~~l~~~-----------------~~~~v~~~~~D~~  107 (248)
                      .+++++|..|++.|   ..+..|+++|++|+-++-.+...+.+.++....                 ....+.++.+|+.
T Consensus        44 ~~~~rvLd~GCG~G---~~a~~LA~~G~~V~gvD~S~~ai~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~d~~  120 (229)
T d2bzga1          44 KSGLRVFFPLCGKA---VEMKWFADRGHSVVGVEISELGIQEFFTEQNLSYSEEPITEIPGTKVFKSSSGNISLYCCSIF  120 (229)
T ss_dssp             CCSCEEEETTCTTC---THHHHHHHTTCEEEEECSCHHHHHHHHHHTTCCEEEEECTTSTTCEEEEETTSSEEEEESCGG
T ss_pred             CCCCEEEEeCCCCc---HHHHHHHhCCCcEEEEeCCHHHHHHHHHHhhccccccchhcccccceeeecCCcEEEEEcchh
Confidence            46789999999876   457778999999999999887766665554321                 1235778888876


Q ss_pred             CHHHHHHHHHHHHhHcCCccEEEEccccC
Q 044010          108 KVDDCRSLVEETMNHFGRLDHLVNNAGIS  136 (248)
Q Consensus       108 ~~~~~~~~~~~~~~~~g~id~vv~~ag~~  136 (248)
                      +...         ...+.+|+++-.....
T Consensus       121 ~l~~---------~~~~~fd~i~~~~~l~  140 (229)
T d2bzga1         121 DLPR---------TNIGKFDMIWDRGALV  140 (229)
T ss_dssp             GGGG---------SCCCCEEEEEESSSTT
T ss_pred             hccc---------cccCceeEEEEEEEEE
Confidence            5431         1224678877665544

>d1ve3a1 c.66.1.43 (A:2-227) Hypothetical protein PH0226 {Archaeon Pyrococcus horikoshii [TaxId: 53953]}

class: Alpha and beta proteins (a/b)
fold: S-adenosyl-L-methionine-dependent methyltransferases
superfamily: S-adenosyl-L-methionine-dependent methyltransferases
family: CAC2371-like
domain: Hypothetical protein PH0226
species: Archaeon Pyrococcus horikoshii [TaxId: 53953]

Probab=90.80  E-value=0.44  Score=35.28  Aligned_cols=76  Identities=16%  Similarity=0.104  Sum_probs=55.8

Q ss_pred             CCCEEEEcCCCChHHHHHHHHHHHcCCeEEEEeCCcchHHHHHHHHHhhCCCcEEEEEccCCCHHHHHHHHHHHHhHcCC
Q 044010           46 SGKVVIITGASSGIGEHLAYEYARRGACLALCARREKSLEEVADTAREIGSPDVITIRADVSKVDDCRSLVEETMNHFGR  125 (248)
Q Consensus        46 ~~k~~lVtGg~~gIG~aia~~l~~~G~~V~l~~r~~~~~~~~~~~l~~~~~~~v~~~~~D~~~~~~~~~~~~~~~~~~g~  125 (248)
                      ++.++|=.|++.|.   ++..|++.|++|+.++.+++..+.+.+.....+. .+..+..|..+..          -..+.
T Consensus        37 ~~~~ILDiGcG~G~---~~~~la~~~~~v~giD~S~~~i~~ak~~~~~~~~-~~~~~~~d~~~l~----------~~~~~  102 (226)
T d1ve3a1          37 KRGKVLDLACGVGG---FSFLLEDYGFEVVGVDISEDMIRKAREYAKSRES-NVEFIVGDARKLS----------FEDKT  102 (226)
T ss_dssp             SCCEEEEETCTTSH---HHHHHHHTTCEEEEEESCHHHHHHHHHHHHHTTC-CCEEEECCTTSCC----------SCTTC
T ss_pred             CCCEEEEECCCcch---hhhhHhhhhcccccccccccchhhhhhhhccccc-ccccccccccccc----------ccCcC
Confidence            34578999998776   5567788899999999998888877777666553 6777888887642          11147


Q ss_pred             ccEEEEcccc
Q 044010          126 LDHLVNNAGI  135 (248)
Q Consensus       126 id~vv~~ag~  135 (248)
                      +|+++..-..
T Consensus       103 fD~I~~~~~l  112 (226)
T d1ve3a1         103 FDYVIFIDSI  112 (226)
T ss_dssp             EEEEEEESCG
T ss_pred             ceEEEEecch
Confidence            9998877543

>d1ps9a3 c.4.1.1 (A:331-465,A:628-671) 2,4-dienoyl-CoA reductase, middle domain {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: Nucleotide-binding domain
superfamily: Nucleotide-binding domain
family: N-terminal domain of adrenodoxin reductase-like
domain: 2,4-dienoyl-CoA reductase, middle domain
species: Escherichia coli [TaxId: 562]

Probab=90.77  E-value=0.18  Score=37.14  Aligned_cols=37  Identities=27%  Similarity=0.331  Sum_probs=32.0

Q ss_pred             CCCCEEEEcCCCChHHHHHHHHHHHcCCeEEEEeCCcc
Q 044010           45 VSGKVVIITGASSGIGEHLAYEYARRGACLALCARREK   82 (248)
Q Consensus        45 ~~~k~~lVtGg~~gIG~aia~~l~~~G~~V~l~~r~~~   82 (248)
                      -++|+++|.|| |--|.+.|..|+++|++|.+..++..
T Consensus        41 ~~~k~V~IIGa-GPAGL~AA~~la~~G~~Vtl~E~~~~   77 (179)
T d1ps9a3          41 VQKKNLAVVGA-GPAGLAFAINAAARGHQVTLFDAHSE   77 (179)
T ss_dssp             SSCCEEEEECC-SHHHHHHHHHHHTTTCEEEEEESSSS
T ss_pred             CCCcEEEEECc-cHHHHHHHHHHHhhccceEEEeccCc
Confidence            46788999987 77889999999999999999998653

>d1oria_ c.66.1.6 (A:) Protein arginine N-methyltransferase 1, PRMT1 {Rat (Rattus norvegicus) [TaxId: 10116]}

class: Alpha and beta proteins (a/b)
fold: S-adenosyl-L-methionine-dependent methyltransferases
superfamily: S-adenosyl-L-methionine-dependent methyltransferases
family: Arginine methyltransferase
domain: Protein arginine N-methyltransferase 1, PRMT1
species: Rat (Rattus norvegicus) [TaxId: 10116]

Probab=90.69  E-value=0.56  Score=37.37  Aligned_cols=77  Identities=19%  Similarity=0.183  Sum_probs=53.0

Q ss_pred             CCCCCEEEEcCCCChHHHHHHHHHHHcCC-eEEEEeCCcchHHHHHHHHHhhC-CCcEEEEEccCCCHHHHHHHHHHHHh
Q 044010           44 DVSGKVVIITGASSGIGEHLAYEYARRGA-CLALCARREKSLEEVADTAREIG-SPDVITIRADVSKVDDCRSLVEETMN  121 (248)
Q Consensus        44 ~~~~k~~lVtGg~~gIG~aia~~l~~~G~-~V~l~~r~~~~~~~~~~~l~~~~-~~~v~~~~~D~~~~~~~~~~~~~~~~  121 (248)
                      ..+||++|-.|++.|+   ++..+++.|+ +|+.++.++ ....+.+..+..+ ..++.++..|..+.+.          
T Consensus        31 ~~~~~~VLDiGcG~G~---ls~~aa~~Ga~~V~avd~s~-~~~~a~~~~~~n~~~~~v~~~~~~~~~~~~----------   96 (316)
T d1oria_          31 LFKDKVVLDVGSGTGI---LCMFAAKAGARKVIGIECSS-ISDYAVKIVKANKLDHVVTIIKGKVEEVEL----------   96 (316)
T ss_dssp             HHTTCEEEEETCTTSH---HHHHHHHTTCSEEEEEECST-THHHHHHHHHHTTCTTTEEEEESCTTTCCC----------
T ss_pred             cCCcCEEEEEecCCcH---HHHHHHHhCCCEEEEEcCcH-HHhhhhhHHHHhCCccccceEeccHHHccc----------
Confidence            4589999999998875   4556777887 688888764 4555555444433 3468999999877531          


Q ss_pred             HcCCccEEEEccc
Q 044010          122 HFGRLDHLVNNAG  134 (248)
Q Consensus       122 ~~g~id~vv~~ag  134 (248)
                      ..+++|+++....
T Consensus        97 ~~~~~D~ivs~~~  109 (316)
T d1oria_          97 PVEKVDIIISEWM  109 (316)
T ss_dssp             SSSCEEEEEECCC
T ss_pred             ccceeEEEeeeee
Confidence            2247999987643

>d2bi7a1 c.4.1.3 (A:2-247,A:317-384) UDP-galactopyranose mutase, N-terminal domain {Klebsiella pneumoniae [TaxId: 573]}

class: Alpha and beta proteins (a/b)
fold: Nucleotide-binding domain
superfamily: Nucleotide-binding domain
family: UDP-galactopyranose mutase, N-terminal domain
domain: UDP-galactopyranose mutase, N-terminal domain
species: Klebsiella pneumoniae [TaxId: 573]

Probab=90.34  E-value=0.17  Score=40.54  Aligned_cols=36  Identities=22%  Similarity=0.398  Sum_probs=30.3

Q ss_pred             CCCEEEEcCCCChHHHHHHHHHHHcCCeEEEEeCCcc
Q 044010           46 SGKVVIITGASSGIGEHLAYEYARRGACLALCARREK   82 (248)
Q Consensus        46 ~~k~~lVtGg~~gIG~aia~~l~~~G~~V~l~~r~~~   82 (248)
                      ++|.++|.|| |-=|..+|..|+++|++|.+..++..
T Consensus         1 k~KKI~IIGa-G~sGL~aA~~L~k~G~~V~viEk~~~   36 (314)
T d2bi7a1           1 KSKKILIVGA-GFSGAVIGRQLAEKGHQVHIIDQRDH   36 (314)
T ss_dssp             CCCEEEEECC-SHHHHHHHHHHHTTTCEEEEEESSSS
T ss_pred             CCCEEEEECC-cHHHHHHHHHHHhCCCCEEEEECCCC
Confidence            4688999987 66788899999999999999988653

>d1yova1 c.111.1.2 (A:6-534) Amyloid beta precursor protein-binding protein 1, APPBP1 {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: Activating enzymes of the ubiquitin-like proteins
superfamily: Activating enzymes of the ubiquitin-like proteins
family: Ubiquitin activating enzymes (UBA)
domain: Amyloid beta precursor protein-binding protein 1, APPBP1
species: Human (Homo sapiens) [TaxId: 9606]

Probab=90.12  E-value=0.11  Score=45.13  Aligned_cols=37  Identities=14%  Similarity=0.232  Sum_probs=32.0

Q ss_pred             cCCCCCEEEEcCCCChHHHHHHHHHHHcCC-eEEEEeCC
Q 044010           43 EDVSGKVVIITGASSGIGEHLAYEYARRGA-CLALCARR   80 (248)
Q Consensus        43 ~~~~~k~~lVtGg~~gIG~aia~~l~~~G~-~V~l~~r~   80 (248)
                      ..+++.+++|.|+ ||+|..+++.|+..|. ++.++|.+
T Consensus        21 ~~L~~s~VlvvG~-gglG~Ei~knLvl~GVg~itivD~d   58 (529)
T d1yova1          21 EALESAHVCLINA-TATGTEILKNLVLPGIGSFTIIDGN   58 (529)
T ss_dssp             HHHHHCEEEECCC-SHHHHHHHHHHHTTTCSEEEEECCS
T ss_pred             HHHhCCCEEEECC-CHHHHHHHHHHHHhcCCEEEEEcCC
Confidence            3678889999986 8999999999999997 88888764

>d1j6ua1 c.5.1.1 (A:0-88) UDP-N-acetylmuramate-alanine ligase MurC {Thermotoga maritima [TaxId: 2336]}

class: Alpha and beta proteins (a/b)
fold: MurCD N-terminal domain
superfamily: MurCD N-terminal domain
family: MurCD N-terminal domain
domain: UDP-N-acetylmuramate-alanine ligase MurC
species: Thermotoga maritima [TaxId: 2336]

Probab=90.08  E-value=0.6  Score=30.02  Aligned_cols=69  Identities=14%  Similarity=0.174  Sum_probs=44.9

Q ss_pred             EEEEcCCCChHHH-HHHHHHHHcCCeEEEEeCCcchHHHHHHHHHhhCCCcEEEEEccCCCHHHHHHHHHHHHhHcCCcc
Q 044010           49 VVIITGASSGIGE-HLAYEYARRGACLALCARREKSLEEVADTAREIGSPDVITIRADVSKVDDCRSLVEETMNHFGRLD  127 (248)
Q Consensus        49 ~~lVtGg~~gIG~-aia~~l~~~G~~V~l~~r~~~~~~~~~~~l~~~~~~~v~~~~~D~~~~~~~~~~~~~~~~~~g~id  127 (248)
                      ++-+.| -+|+|. ++|+.|.++|++|.-.|++..+   ..+.|++.+- ++ +..-|..+.              .+.|
T Consensus         3 ~ihfiG-IgG~GMs~LA~~L~~~G~~VsGSD~~~~~---~t~~L~~~Gi-~i-~~gh~~~~i--------------~~~d   62 (89)
T d1j6ua1           3 KIHFVG-IGGIGMSAVALHEFSNGNDVYGSNIEETE---RTAYLRKLGI-PI-FVPHSADNW--------------YDPD   62 (89)
T ss_dssp             EEEEET-TTSHHHHHHHHHHHHTTCEEEEECSSCCH---HHHHHHHTTC-CE-ESSCCTTSC--------------CCCS
T ss_pred             EEEEEe-ECHHHHHHHHHHHHhCCCeEEEEeCCCCh---hHHHHHHCCC-eE-Eeeeccccc--------------CCCC
Confidence            344454 477786 5899999999999999988643   3334666553 22 122232221              3689


Q ss_pred             EEEEccccCC
Q 044010          128 HLVNNAGISS  137 (248)
Q Consensus       128 ~vv~~ag~~~  137 (248)
                      .+|...++..
T Consensus        63 ~vV~SsAI~~   72 (89)
T d1j6ua1          63 LVIKTPAVRD   72 (89)
T ss_dssp             EEEECTTCCT
T ss_pred             EEEEecCcCC
Confidence            9999998854

>d2fhpa1 c.66.1.46 (A:1-182) Putative methylase EF2452 {Enterococcus faecalis [TaxId: 1351]}

class: Alpha and beta proteins (a/b)
fold: S-adenosyl-L-methionine-dependent methyltransferases
superfamily: S-adenosyl-L-methionine-dependent methyltransferases
family: YhhF-like
domain: Putative methylase EF2452
species: Enterococcus faecalis [TaxId: 1351]

Probab=90.00  E-value=1.6  Score=31.74  Aligned_cols=82  Identities=11%  Similarity=0.104  Sum_probs=57.5

Q ss_pred             cCCCCCEEEEc-CCCChHHHHHHHHHHHcCC-eEEEEeCCcchHHHHHHHHHhhCC-CcEEEEEccCCCHHHHHHHHHHH
Q 044010           43 EDVSGKVVIIT-GASSGIGEHLAYEYARRGA-CLALCARREKSLEEVADTAREIGS-PDVITIRADVSKVDDCRSLVEET  119 (248)
Q Consensus        43 ~~~~~k~~lVt-Gg~~gIG~aia~~l~~~G~-~V~l~~r~~~~~~~~~~~l~~~~~-~~v~~~~~D~~~~~~~~~~~~~~  119 (248)
                      ...+|+++|=. .|+|++|.+.    +++|+ +|+.++.+.+..+.+.+.++..+. .++.++..|+.      +.+++.
T Consensus        38 ~~~~~~~vLDlfaGsG~~g~ea----~srGa~~v~~ve~~~~a~~~~~~N~~~~~~~~~~~i~~~D~~------~~l~~~  107 (182)
T d2fhpa1          38 PYFDGGMALDLYSGSGGLAIEA----VSRGMDKSICIEKNFAALKVIKENIAITKEPEKFEVRKMDAN------RALEQF  107 (182)
T ss_dssp             SCCSSCEEEETTCTTCHHHHHH----HHTTCSEEEEEESCHHHHHHHHHHHHHHTCGGGEEEEESCHH------HHHHHH
T ss_pred             HhcCCCEEEEccccccccccee----eecchhHHHHHHHHHHHHHHHHHHhhhhhcccccccccccch------hhhhhh
Confidence            35678887744 4567788864    56888 799999998888877777766543 36788888873      334444


Q ss_pred             HhHcCCccEEEEccc
Q 044010          120 MNHFGRLDHLVNNAG  134 (248)
Q Consensus       120 ~~~~g~id~vv~~ag  134 (248)
                      .++..++|+++....
T Consensus       108 ~~~~~~fDlIflDPP  122 (182)
T d2fhpa1         108 YEEKLQFDLVLLDPP  122 (182)
T ss_dssp             HHTTCCEEEEEECCC
T ss_pred             cccCCCcceEEechh
Confidence            444457999987654

>d1bgva1 c.2.1.7 (A:195-449) Glutamate dehydrogenase {Clostridium symbiosum [TaxId: 1512]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Aminoacid dehydrogenase-like, C-terminal domain
domain: Glutamate dehydrogenase
species: Clostridium symbiosum [TaxId: 1512]

Probab=89.99  E-value=0.3  Score=38.05  Aligned_cols=37  Identities=22%  Similarity=0.236  Sum_probs=32.5

Q ss_pred             ccCCCCCEEEEcCCCChHHHHHHHHHHHcCCeEEEEeC
Q 044010           42 SEDVSGKVVIITGASSGIGEHLAYEYARRGACLALCAR   79 (248)
Q Consensus        42 ~~~~~~k~~lVtGg~~gIG~aia~~l~~~G~~V~l~~r   79 (248)
                      ..+++||+++|-| -|.+|..+++.|.+.|++|+.++.
T Consensus        31 ~~~l~g~~v~IQG-fGnVG~~~a~~L~e~GakvvavsD   67 (255)
T d1bgva1          31 NDTLVGKTVALAG-FGNVAWGAAKKLAELGAKAVTLSG   67 (255)
T ss_dssp             TCCSTTCEEEECC-SSHHHHHHHHHHHHHTCEEEEEEE
T ss_pred             CCCCCCCEEEEEC-CCHHHHHHHHHHHHcCCeEEEEec
Confidence            4589999999998 589999999999999999887653

>d1diha1 c.2.1.3 (A:2-130,A:241-273) Dihydrodipicolinate reductase {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Glyceraldehyde-3-phosphate dehydrogenase-like, N-terminal domain
domain: Dihydrodipicolinate reductase
species: Escherichia coli [TaxId: 562]

Probab=89.88  E-value=0.11  Score=37.70  Aligned_cols=84  Identities=19%  Similarity=0.203  Sum_probs=52.3

Q ss_pred             EEEEcCCCChHHHHHHHHHHHc-CCeEEE-EeCCcch-HHHHHHHHHhh-------------CCCcEEEEEccCCCHHHH
Q 044010           49 VVIITGASSGIGEHLAYEYARR-GACLAL-CARREKS-LEEVADTAREI-------------GSPDVITIRADVSKVDDC  112 (248)
Q Consensus        49 ~~lVtGg~~gIG~aia~~l~~~-G~~V~l-~~r~~~~-~~~~~~~l~~~-------------~~~~v~~~~~D~~~~~~~  112 (248)
                      ++.|.|++|-+|+++++...+. +.+++. ++|.... ......++...             -.... -+..|++.++..
T Consensus         6 kI~i~Ga~GrMG~~i~~~i~~~~~~~lv~~~~~~~~~~~g~d~~~~~~~~~~~~~~~~~~~~~~~~~-DViIDFs~p~~~   84 (162)
T d1diha1           6 RVAIAGAGGRMGRQLIQAALALEGVQLGAALEREGSSLLGSDAGELAGAGKTGVTVQSSLDAVKDDF-DVFIDFTRPEGT   84 (162)
T ss_dssp             EEEETTTTSHHHHHHHHHHHHSTTEECCCEECCTTCTTCSCCTTCSSSSSCCSCCEESCSTTTTTSC-SEEEECSCHHHH
T ss_pred             EEEEECCCCHHHHHHHHHHHhCCCCEEEEEEecccchhccchhhhhhccccCCceeeccHHHHhccc-ceEEEeccHHHH
Confidence            5889999999999999999886 555433 2332110 00000000000             00011 156899999999


Q ss_pred             HHHHHHHHhHcCCccEEEEcccc
Q 044010          113 RSLVEETMNHFGRLDHLVNNAGI  135 (248)
Q Consensus       113 ~~~~~~~~~~~g~id~vv~~ag~  135 (248)
                      .+.++.+.+.  ++.+|+-+.|+
T Consensus        85 ~~~~~~a~~~--~~~~ViGTTG~  105 (162)
T d1diha1          85 LNHLAFCRQH--GKGMVIGTTGF  105 (162)
T ss_dssp             HHHHHHHHHT--TCEEEECCCCC
T ss_pred             HHHHHHHHhc--cceeEEecCCC
Confidence            9999887654  68888877775

>d1mv8a2 c.2.1.6 (A:1-202) GDP-mannose 6-dehydrogenase {Pseudomonas aeruginosa [TaxId: 287]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: 6-phosphogluconate dehydrogenase-like, N-terminal domain
domain: GDP-mannose 6-dehydrogenase
species: Pseudomonas aeruginosa [TaxId: 287]

Probab=89.71  E-value=0.2  Score=37.44  Aligned_cols=35  Identities=14%  Similarity=0.074  Sum_probs=29.0

Q ss_pred             EEEcCCCChHHHHHHHHHHHcCCeEEEEeCCcchHH
Q 044010           50 VIITGASSGIGEHLAYEYARRGACLALCARREKSLE   85 (248)
Q Consensus        50 ~lVtGg~~gIG~aia~~l~~~G~~V~l~~r~~~~~~   85 (248)
                      +.|. |.|.+|..+|..|++.|++|+..+.|.++.+
T Consensus         3 I~Vi-GlG~vGl~~a~~la~~g~~V~g~D~n~~~i~   37 (202)
T d1mv8a2           3 ISIF-GLGYVGAVCAGCLSARGHEVIGVDVSSTKID   37 (202)
T ss_dssp             EEEE-CCSTTHHHHHHHHHHTTCEEEEECSCHHHHH
T ss_pred             EEEE-CCCHhHHHHHHHHHhCCCcEEEEeCCHHHHH
Confidence            4555 6699999999999999999999998865433

>d1hwxa1 c.2.1.7 (A:209-501) Glutamate dehydrogenase {Cow (Bos taurus) [TaxId: 9913]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Aminoacid dehydrogenase-like, C-terminal domain
domain: Glutamate dehydrogenase
species: Cow (Bos taurus) [TaxId: 9913]

Probab=89.60  E-value=0.27  Score=39.09  Aligned_cols=38  Identities=18%  Similarity=0.219  Sum_probs=33.4

Q ss_pred             cccCCCCCEEEEcCCCChHHHHHHHHHHHcCCeEEEEeC
Q 044010           41 FSEDVSGKVVIITGASSGIGEHLAYEYARRGACLALCAR   79 (248)
Q Consensus        41 ~~~~~~~k~~lVtGg~~gIG~aia~~l~~~G~~V~l~~r   79 (248)
                      +..+++||+++|-|- |.+|..+|+.|.+.|++|+.++-
T Consensus        30 l~~~L~gktvaIqGf-GnVG~~~A~~L~e~Gakvv~vsD   67 (293)
T d1hwxa1          30 MTPGFGDKTFAVQGF-GNVGLHSMRYLHRFGAKCVAVGE   67 (293)
T ss_dssp             CCSSSTTCEEEEECC-SHHHHHHHHHHHHTTCEEEEEEE
T ss_pred             CCCCCCCCEEEEECC-CHHHHHHHHHHHHCCCEEEEEEc
Confidence            346899999999976 89999999999999999887764

>d2d59a1 c.2.1.8 (A:4-142) Hypothetical protein PH1109 {Pyrococcus horikoshii [TaxId: 53953]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: CoA-binding domain
domain: Hypothetical protein PH1109
species: Pyrococcus horikoshii [TaxId: 53953]

Probab=89.54  E-value=2.3  Score=29.47  Aligned_cols=87  Identities=10%  Similarity=-0.009  Sum_probs=56.3

Q ss_pred             CCCEEEEcCCC---ChHHHHHHHHHHHcCCeEEEEeCCcchHH--HHHHHHHhhCCCcEEEEEccCCCHHHHHHHHHHHH
Q 044010           46 SGKVVIITGAS---SGIGEHLAYEYARRGACLALCARREKSLE--EVADTAREIGSPDVITIRADVSKVDDCRSLVEETM  120 (248)
Q Consensus        46 ~~k~~lVtGg~---~gIG~aia~~l~~~G~~V~l~~r~~~~~~--~~~~~l~~~~~~~v~~~~~D~~~~~~~~~~~~~~~  120 (248)
                      +-|++.|.|+|   +..|..+++.|.+.|++|+.+..+.+...  .+...+.+... .+.. ..=+...+.+.++++++.
T Consensus        18 ~~ksIAVVGaS~~~~~~g~~v~~~L~~~g~~v~pVnP~~~~i~G~~~~~sl~dlp~-~iD~-v~i~vp~~~~~~~~~e~~   95 (139)
T d2d59a1          18 RYKKIALVGASPKPERDANIVMKYLLEHGYDVYPVNPKYEEVLGRKCYPSVLDIPD-KIEV-VDLFVKPKLTMEYVEQAI   95 (139)
T ss_dssp             HCCEEEEETCCSCTTSHHHHHHHHHHHTTCEEEEECTTCSEETTEECBSSGGGCSS-CCSE-EEECSCHHHHHHHHHHHH
T ss_pred             cCCeEEEEeecCCCCCchHHHHHHHHHCCCEEEEECCcccccCCCcccccccccCc-cceE-EEEEeCHHHHHHHHHHHH
Confidence            46889999998   67999999999999999988876543211  11112222221 2222 122345777888888887


Q ss_pred             hHcCCccEEEEccccC
Q 044010          121 NHFGRLDHLVNNAGIS  136 (248)
Q Consensus       121 ~~~g~id~vv~~ag~~  136 (248)
                      +.  ++..++...|..
T Consensus        96 ~~--g~k~v~~~~G~~  109 (139)
T d2d59a1          96 KK--GAKVVWFQYNTY  109 (139)
T ss_dssp             HH--TCSEEEECTTCC
T ss_pred             Hh--CCCEEEEecccc
Confidence            65  466777777654

>d2voua1 c.3.1.2 (A:2-163,A:292-394) Dihydroxypyridine hydroxylase DhpH {Arthrobacter nicotinovorans [TaxId: 29320]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: FAD-linked reductases, N-terminal domain
domain: Dihydroxypyridine hydroxylase DhpH
species: Arthrobacter nicotinovorans [TaxId: 29320]

Probab=89.41  E-value=0.29  Score=37.24  Aligned_cols=35  Identities=17%  Similarity=0.181  Sum_probs=29.2

Q ss_pred             CCCEEEEcCCCChHHHHHHHHHHHcCCeEEEEeCCc
Q 044010           46 SGKVVIITGASSGIGEHLAYEYARRGACLALCARRE   81 (248)
Q Consensus        46 ~~k~~lVtGg~~gIG~aia~~l~~~G~~V~l~~r~~   81 (248)
                      +.++|+|.|| |--|..+|..|+++|++|++..|+.
T Consensus         3 ~~~kV~IiGa-G~aGl~~A~~L~~~G~~v~v~Er~~   37 (265)
T d2voua1           3 TTDRIAVVGG-SISGLTAALMLRDAGVDVDVYERSP   37 (265)
T ss_dssp             CCSEEEEECC-SHHHHHHHHHHHHTTCEEEEECSSS
T ss_pred             CCCcEEEECc-CHHHHHHHHHHHHCCCCEEEEeCCC
Confidence            5677888887 6677888889999999999999864

>d1b26a1 c.2.1.7 (A:179-412) Glutamate dehydrogenase {Thermotoga maritima [TaxId: 2336]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Aminoacid dehydrogenase-like, C-terminal domain
domain: Glutamate dehydrogenase
species: Thermotoga maritima [TaxId: 2336]

Probab=89.39  E-value=0.27  Score=37.78  Aligned_cols=36  Identities=17%  Similarity=0.239  Sum_probs=30.5

Q ss_pred             ccCCCCCEEEEcCCCChHHHHHHHHHHH-cCCeEEEEe
Q 044010           42 SEDVSGKVVIITGASSGIGEHLAYEYAR-RGACLALCA   78 (248)
Q Consensus        42 ~~~~~~k~~lVtGg~~gIG~aia~~l~~-~G~~V~l~~   78 (248)
                      ..+++|+++.|-| -|-+|..+|+.|.+ .|++|+.++
T Consensus        26 ~~~l~g~~vaIqG-~GnVG~~~a~~L~~e~Ga~vv~vs   62 (234)
T d1b26a1          26 GIDPKKATVAVQG-FGNVGQFAALLISQELGSKVVAVS   62 (234)
T ss_dssp             TCCTTTCEEEEEC-CSHHHHHHHHHHHHHHCCEEEEEE
T ss_pred             CCCcCCCEEEEEC-CCHHHHHHHHHHHHhcCCceEEee
Confidence            4589999999886 69999999999986 599888765

>d2gf3a1 c.3.1.2 (A:1-217,A:322-385) Sarcosine oxidase {Bacillus sp., strain b0618 [TaxId: 1409]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: FAD-linked reductases, N-terminal domain
domain: Sarcosine oxidase
species: Bacillus sp., strain b0618 [TaxId: 1409]

Probab=89.38  E-value=0.18  Score=39.14  Aligned_cols=31  Identities=29%  Similarity=0.496  Sum_probs=26.9

Q ss_pred             EEEcCCCChHHHHHHHHHHHcCCeEEEEeCCc
Q 044010           50 VIITGASSGIGEHLAYEYARRGACLALCARRE   81 (248)
Q Consensus        50 ~lVtGg~~gIG~aia~~l~~~G~~V~l~~r~~   81 (248)
                      ++|.|| |-.|.++|..|+++|.+|+++.+..
T Consensus         6 vvIIGa-Gi~Gls~A~~La~~G~~V~viE~~~   36 (281)
T d2gf3a1           6 VIVVGA-GSMGMAAGYQLAKQGVKTLLVDAFD   36 (281)
T ss_dssp             EEEECC-SHHHHHHHHHHHHTTCCEEEECSSC
T ss_pred             EEEECc-CHHHHHHHHHHHHCCCcEEEEeCCC
Confidence            667765 8899999999999999999998854

>d1q0qa2 c.2.1.3 (A:1-125,A:275-300) 1-deoxy-D-xylulose-5-phosphate reductoisomerase {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Glyceraldehyde-3-phosphate dehydrogenase-like, N-terminal domain
domain: 1-deoxy-D-xylulose-5-phosphate reductoisomerase
species: Escherichia coli [TaxId: 562]

Probab=89.32  E-value=1.8  Score=30.61  Aligned_cols=48  Identities=13%  Similarity=0.135  Sum_probs=31.7

Q ss_pred             CEEEEcCCCChHHHHHHHHHHHc--CCeEEEEeCCcchHHHHHHHHHhhCC
Q 044010           48 KVVIITGASSGIGEHLAYEYARR--GACLALCARREKSLEEVADTAREIGS   96 (248)
Q Consensus        48 k~~lVtGg~~gIG~aia~~l~~~--G~~V~l~~r~~~~~~~~~~~l~~~~~   96 (248)
                      |++.|.|+||.||.....-+.+.  .++|+..+-+. ..+...+...+..+
T Consensus         2 K~I~IlGsTGSIG~~tL~Vi~~~~d~f~v~~Lsa~~-N~~~L~~q~~~f~p   51 (151)
T d1q0qa2           2 KQLTILGSTGSIGCSTLDVVRHNPEHFRVVALVAGK-NVTRMVEQCLEFSP   51 (151)
T ss_dssp             EEEEEETTTSHHHHHHHHHHHHCTTTEEEEEEEESS-CHHHHHHHHHHHCC
T ss_pred             CeEEEEcCCcHHHHHHHHHHHhCCCCcEEEEEEecC-cHHHHHHHHHHHhh
Confidence            57899999999999998888776  35665554432 22444444444443

>d2gv8a2 c.3.1.5 (A:181-287) Flavin-dependent monoxygenase SPBP16F5.08c {Schizosaccharomyces pombe [TaxId: 4896]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: FAD/NAD-linked reductases, N-terminal and central domains
domain: Flavin-dependent monoxygenase SPBP16F5.08c
species: Schizosaccharomyces pombe [TaxId: 4896]

Probab=89.23  E-value=0.14  Score=34.20  Aligned_cols=39  Identities=13%  Similarity=0.117  Sum_probs=31.8

Q ss_pred             ccCCCCCEEEEcCCCChHHHHHHHHHHHcCCeEEEEeCCc
Q 044010           42 SEDVSGKVVIITGASSGIGEHLAYEYARRGACLALCARRE   81 (248)
Q Consensus        42 ~~~~~~k~~lVtGg~~gIG~aia~~l~~~G~~V~l~~r~~   81 (248)
                      +.+++||+++|.|+ |-=|..+|..|++.+.++++..|..
T Consensus        27 ~~~f~gK~VlVVG~-g~Sa~dia~~l~~~ak~v~~~~~r~   65 (107)
T d2gv8a2          27 PELFVGESVLVVGG-ASSANDLVRHLTPVAKHPIYQSLLG   65 (107)
T ss_dssp             GGGGTTCCEEEECS-SHHHHHHHHHHTTTSCSSEEEECTT
T ss_pred             hhhcCCCeEEEECC-CCCHHHHHHHHHHhcCEEEEEEecC
Confidence            35799999999988 4778889999998888877777754

>d1djqa3 c.4.1.1 (A:341-489,A:646-729) Trimethylamine dehydrogenase, middle domain {Methylophilus methylotrophus, w3a1 [TaxId: 17]}

class: Alpha and beta proteins (a/b)
fold: Nucleotide-binding domain
superfamily: Nucleotide-binding domain
family: N-terminal domain of adrenodoxin reductase-like
domain: Trimethylamine dehydrogenase, middle domain
species: Methylophilus methylotrophus, w3a1 [TaxId: 17]

Probab=89.12  E-value=0.34  Score=36.69  Aligned_cols=38  Identities=26%  Similarity=0.283  Sum_probs=31.9

Q ss_pred             CCCCCEEEEcCCCChHHHHHHHHHHHcCCeEEEEeCCcc
Q 044010           44 DVSGKVVIITGASSGIGEHLAYEYARRGACLALCARREK   82 (248)
Q Consensus        44 ~~~~k~~lVtGg~~gIG~aia~~l~~~G~~V~l~~r~~~   82 (248)
                      .-++|+++|.|| |--|...|..|+++|++|.+..++..
T Consensus        46 ~~~~k~VvIIGa-GpAGl~aA~~l~~~G~~v~l~E~~~~   83 (233)
T d1djqa3          46 TKNKDSVLIVGA-GPSGSEAARVLMESGYTVHLTDTAEK   83 (233)
T ss_dssp             CSSCCEEEEECC-SHHHHHHHHHHHHTTCEEEEECSSSS
T ss_pred             ccCCceEEEEcc-cHHHHHHHHHHHHhccceeeEeeccc
Confidence            346789999988 66789999999999999999987653

>d1byia_ c.37.1.10 (A:) Dethiobiotin synthetase {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: P-loop containing nucleoside triphosphate hydrolases
superfamily: P-loop containing nucleoside triphosphate hydrolases
family: Nitrogenase iron protein-like
domain: Dethiobiotin synthetase
species: Escherichia coli [TaxId: 562]

Probab=89.04  E-value=0.11  Score=38.62  Aligned_cols=31  Identities=23%  Similarity=0.222  Sum_probs=26.7

Q ss_pred             CEEEEcCCCChHHH-----HHHHHHHHcCCeEEEEe
Q 044010           48 KVVIITGASSGIGE-----HLAYEYARRGACLALCA   78 (248)
Q Consensus        48 k~~lVtGg~~gIG~-----aia~~l~~~G~~V~l~~   78 (248)
                      |+.+|||.+.|.|.     .+|..|+++|++|.+++
T Consensus         2 ~~~~i~gt~~GVGKTtvs~~La~aLa~~G~rVl~id   37 (224)
T d1byia_           2 KRYFVTGTDTEVGKTVASCALLQAAKAAGYRTAGYK   37 (224)
T ss_dssp             EEEEEEESSTTSCHHHHHHHHHHHHHHTTCCEEEEC
T ss_pred             ceEEEEECCCCccHHHHHHHHHHHHHHCCCeEEEEC
Confidence            78899999888774     57889999999999986

>d1pj5a2 c.3.1.2 (A:4-219,A:339-427) N,N-dimethylglycine oxidase {Arthrobacter globiformis [TaxId: 1665]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: FAD-linked reductases, N-terminal domain
domain: N,N-dimethylglycine oxidase
species: Arthrobacter globiformis [TaxId: 1665]

Probab=88.97  E-value=0.2  Score=39.41  Aligned_cols=32  Identities=28%  Similarity=0.415  Sum_probs=27.1

Q ss_pred             EEEEcCCCChHHHHHHHHHHHcCC-eEEEEeCCc
Q 044010           49 VVIITGASSGIGEHLAYEYARRGA-CLALCARRE   81 (248)
Q Consensus        49 ~~lVtGg~~gIG~aia~~l~~~G~-~V~l~~r~~   81 (248)
                      .|+|.|| |-+|.++|.+|+++|. +|.+++|+.
T Consensus         3 dViIIGa-Gi~G~s~A~~La~~G~~~V~liE~~~   35 (305)
T d1pj5a2           3 RIVIIGA-GIVGTNLADELVTRGWNNITVLDQGP   35 (305)
T ss_dssp             CEEEECC-SHHHHHHHHHHHHTTCCCEEEECSSC
T ss_pred             CEEEECc-CHHHHHHHHHHHHcCCCcEEEEeCCC
Confidence            4677766 7999999999999997 699998864

>d2iida1 c.3.1.2 (A:4-319,A:433-486) L-aminoacid oxidase {Malayan pit viper (Calloselasma rhodostoma) [TaxId: 8717]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: FAD-linked reductases, N-terminal domain
domain: L-aminoacid oxidase
species: Malayan pit viper (Calloselasma rhodostoma) [TaxId: 8717]

Probab=88.92  E-value=0.36  Score=37.56  Aligned_cols=36  Identities=31%  Similarity=0.330  Sum_probs=30.1

Q ss_pred             CCCCEEEEcCCCChHHHHHHHHHHHcCCeEEEEeCCc
Q 044010           45 VSGKVVIITGASSGIGEHLAYEYARRGACLALCARRE   81 (248)
Q Consensus        45 ~~~k~~lVtGg~~gIG~aia~~l~~~G~~V~l~~r~~   81 (248)
                      -+.|+|+|.|| |--|...|..|+++|++|.+..+++
T Consensus        28 ~~pkkV~IIGa-G~aGLsaA~~L~~~G~~V~vlE~~~   63 (370)
T d2iida1          28 SNPKHVVIVGA-GMAGLSAAYVLAGAGHQVTVLEASE   63 (370)
T ss_dssp             SSCCEEEEECC-BHHHHHHHHHHHHHTCEEEEECSSS
T ss_pred             CCCCeEEEECC-CHHHHHHHHHHHHCCCCEEEEeCCC
Confidence            35578999987 5668999999999999999998765

>d2bcgg1 c.3.1.3 (G:5-301) Guanine nucleotide dissociation inhibitor, GDI {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: GDI-like N domain
domain: Guanine nucleotide dissociation inhibitor, GDI
species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]

Probab=88.92  E-value=0.21  Score=37.01  Aligned_cols=31  Identities=16%  Similarity=0.114  Sum_probs=26.9

Q ss_pred             EEEcCCCChHHHHHHHHHHHcCCeEEEEeCCc
Q 044010           50 VIITGASSGIGEHLAYEYARRGACLALCARRE   81 (248)
Q Consensus        50 ~lVtGg~~gIG~aia~~l~~~G~~V~l~~r~~   81 (248)
                      ++|.|+ |--|..+|..|+++|.+|.++.++.
T Consensus         8 viViGa-G~~Gl~~A~~La~~G~~V~vlE~~~   38 (297)
T d2bcgg1           8 VIVLGT-GITECILSGLLSVDGKKVLHIDKQD   38 (297)
T ss_dssp             EEEECC-SHHHHHHHHHHHHTTCCEEEECSSS
T ss_pred             EEEECc-CHHHHHHHHHHHHCCCCEEEEcCCC
Confidence            677764 7888999999999999999999865

>d2fpoa1 c.66.1.46 (A:10-192) Methylase YhhF {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: S-adenosyl-L-methionine-dependent methyltransferases
superfamily: S-adenosyl-L-methionine-dependent methyltransferases
family: YhhF-like
domain: Methylase YhhF
species: Escherichia coli [TaxId: 562]

Probab=88.82  E-value=0.73  Score=33.62  Aligned_cols=78  Identities=6%  Similarity=0.002  Sum_probs=54.2

Q ss_pred             CCCCCEEEEc-CCCChHHHHHHHHHHHcCC-eEEEEeCCcchHHHHHHHHHhhCCCcEEEEEccCCCHHHHHHHHHHHHh
Q 044010           44 DVSGKVVIIT-GASSGIGEHLAYEYARRGA-CLALCARREKSLEEVADTAREIGSPDVITIRADVSKVDDCRSLVEETMN  121 (248)
Q Consensus        44 ~~~~k~~lVt-Gg~~gIG~aia~~l~~~G~-~V~l~~r~~~~~~~~~~~l~~~~~~~v~~~~~D~~~~~~~~~~~~~~~~  121 (248)
                      ++.++++|=. .|+|.+|.+.    +++|+ +|+.++.+.+..+.+.+.++..+.....++..|+.         +.+..
T Consensus        41 ~~~~~~vLDlfaGsG~~giea----lsrGa~~v~~VE~~~~a~~~~k~N~~~~~~~~~~ii~~d~~---------~~l~~  107 (183)
T d2fpoa1          41 VIVDAQCLDCFAGSGALGLEA----LSRYAAGATLIEMDRAVSQQLIKNLATLKAGNARVVNSNAM---------SFLAQ  107 (183)
T ss_dssp             HHTTCEEEETTCTTCHHHHHH----HHTTCSEEEEECSCHHHHHHHHHHHHHTTCCSEEEECSCHH---------HHHSS
T ss_pred             ccchhhhhhhhccccceeeeE----EecCcceeEEEEEeechhhHHHHHHhhccccceeeeeeccc---------ccccc
Confidence            4677777744 4556777664    56888 79999999988888888777665557777777642         22223


Q ss_pred             HcCCccEEEEccc
Q 044010          122 HFGRLDHLVNNAG  134 (248)
Q Consensus       122 ~~g~id~vv~~ag  134 (248)
                      ...++|+++....
T Consensus       108 ~~~~fDlIf~DPP  120 (183)
T d2fpoa1         108 KGTPHNIVFVDPP  120 (183)
T ss_dssp             CCCCEEEEEECCS
T ss_pred             cccccCEEEEcCc
Confidence            3457899988854

>d1s6ya1 c.2.1.5 (A:4-172) 6-phospho-beta-glucosidase {Bacillus stearothermophilus [TaxId: 1422]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: LDH N-terminal domain-like
domain: 6-phospho-beta-glucosidase
species: Bacillus stearothermophilus [TaxId: 1422]

Probab=88.49  E-value=0.25  Score=35.94  Aligned_cols=77  Identities=19%  Similarity=0.050  Sum_probs=41.0

Q ss_pred             EEEEcCC-CChHHHHHHHHHHHc----CCeEEEEeCCcch--HHHHHHHH---HhhCCCcEEEEEccCCCHHHHHHHHHH
Q 044010           49 VVIITGA-SSGIGEHLAYEYARR----GACLALCARREKS--LEEVADTA---REIGSPDVITIRADVSKVDDCRSLVEE  118 (248)
Q Consensus        49 ~~lVtGg-~~gIG~aia~~l~~~----G~~V~l~~r~~~~--~~~~~~~l---~~~~~~~v~~~~~D~~~~~~~~~~~~~  118 (248)
                      ++.|.|| +.|.+.+++..+...    +.++++.+.++++  ++......   ....+.....  ...+|.   .+.   
T Consensus         3 KI~iIGaGs~~~~~~~~~l~~~~~~~~~~eI~L~Di~e~~~~~~~~d~~~~~~~~~~~~~~~~--~~~td~---~~a---   74 (169)
T d1s6ya1           3 KIATIGGGSSYTPELVEGLIKRYHELPVGELWLVDIPEGKEKLEIVGALAKRMVEKAGVPIEI--HLTLDR---RRA---   74 (169)
T ss_dssp             EEEEETTTCTTHHHHHHHHHHTTTTCCEEEEEEECCGGGHHHHHHHHHHHHHHHHHTTCCCEE--EEESCH---HHH---
T ss_pred             EEEEECCChhhHHHHHHHHHHhccccCCCEEEEEcCCccHHHHHHHHHHHHHHHHhcCCCcee--eecCCc---hhh---
Confidence            3455554 567777776666643    2489999998764  22222111   1111112221  122333   122   


Q ss_pred             HHhHcCCccEEEEccccCC
Q 044010          119 TMNHFGRLDHLVNNAGISS  137 (248)
Q Consensus       119 ~~~~~g~id~vv~~ag~~~  137 (248)
                          ..+-|++|+++|...
T Consensus        75 ----l~gaDvVv~ta~~~~   89 (169)
T d1s6ya1          75 ----LDGADFVTTQFRVGG   89 (169)
T ss_dssp             ----HTTCSEEEECCCTTH
T ss_pred             ----cCCCCEEEEccccCC
Confidence                237899999999764

>d1xxla_ c.66.1.41 (A:) Hypothetical protein YcgJ {Bacillus subtilis [TaxId: 1423]}

class: Alpha and beta proteins (a/b)
fold: S-adenosyl-L-methionine-dependent methyltransferases
superfamily: S-adenosyl-L-methionine-dependent methyltransferases
family: UbiE/COQ5-like
domain: Hypothetical protein YcgJ
species: Bacillus subtilis [TaxId: 1423]

Probab=88.29  E-value=0.8  Score=34.40  Aligned_cols=77  Identities=14%  Similarity=0.089  Sum_probs=55.3

Q ss_pred             CCCEEEEcCCCChHHHHHHHHHHHcCCeEEEEeCCcchHHHHHHHHHhhCCCcEEEEEccCCCHHHHHHHHHHHHhHcCC
Q 044010           46 SGKVVIITGASSGIGEHLAYEYARRGACLALCARREKSLEEVADTAREIGSPDVITIRADVSKVDDCRSLVEETMNHFGR  125 (248)
Q Consensus        46 ~~k~~lVtGg~~gIG~aia~~l~~~G~~V~l~~r~~~~~~~~~~~l~~~~~~~v~~~~~D~~~~~~~~~~~~~~~~~~g~  125 (248)
                      .|.++|=.|++.|.-   +..|+++|++|+-++-++..++.+.+..+..+...+.+++.|..+.. +         ..+.
T Consensus        16 ~~~rILDiGcGtG~~---~~~la~~~~~v~gvD~S~~~l~~A~~~~~~~~~~~~~~~~~d~~~~~-~---------~~~~   82 (234)
T d1xxla_          16 AEHRVLDIGAGAGHT---ALAFSPYVQECIGVDATKEMVEVASSFAQEKGVENVRFQQGTAESLP-F---------PDDS   82 (234)
T ss_dssp             TTCEEEEESCTTSHH---HHHHGGGSSEEEEEESCHHHHHHHHHHHHHHTCCSEEEEECBTTBCC-S---------CTTC
T ss_pred             CCCEEEEeCCcCcHH---HHHHHHhCCeEEEEeCChhhhhhhhhhhccccccccccccccccccc-c---------cccc
Confidence            467899999887743   34566778899999999888888877777766557889999986542 1         0146


Q ss_pred             ccEEEEcccc
Q 044010          126 LDHLVNNAGI  135 (248)
Q Consensus       126 id~vv~~ag~  135 (248)
                      +|.++.+-..
T Consensus        83 fD~v~~~~~l   92 (234)
T d1xxla_          83 FDIITCRYAA   92 (234)
T ss_dssp             EEEEEEESCG
T ss_pred             cceeeeecee
Confidence            8877665433

>d1v9la1 c.2.1.7 (A:180-421) Glutamate dehydrogenase {Pyrobaculum islandicum [TaxId: 2277]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Aminoacid dehydrogenase-like, C-terminal domain
domain: Glutamate dehydrogenase
species: Pyrobaculum islandicum [TaxId: 2277]

Probab=88.28  E-value=0.4  Score=36.97  Aligned_cols=36  Identities=28%  Similarity=0.434  Sum_probs=31.9

Q ss_pred             cCCCCCEEEEcCCCChHHHHHHHHHHHcCCeEEEEeC
Q 044010           43 EDVSGKVVIITGASSGIGEHLAYEYARRGACLALCAR   79 (248)
Q Consensus        43 ~~~~~k~~lVtGg~~gIG~aia~~l~~~G~~V~l~~r   79 (248)
                      .+++||+++|-| -|..|..+|+.|.+.|++|+.++.
T Consensus        27 ~~l~g~~v~IqG-fGnVG~~~a~~L~~~Gakvv~vsD   62 (242)
T d1v9la1          27 GGIEGKTVAIQG-MGNVGRWTAYWLEKMGAKVIAVSD   62 (242)
T ss_dssp             SCCTTCEEEEEC-CSHHHHHHHHHHHTTTCEEEEEEC
T ss_pred             CCCCCCEEEEEC-CCHHHHHHHHHHHHcCCeEEEeec
Confidence            489999999996 599999999999999999886664

>d2o14a2 c.23.10.8 (A:160-367) Hypothetical protein YxiM {Bacillus subtilis [TaxId: 1423]}

class: Alpha and beta proteins (a/b)
fold: Flavodoxin-like
superfamily: SGNH hydrolase
family: YxiM C-terminal domain-like
domain: Hypothetical protein YxiM
species: Bacillus subtilis [TaxId: 1423]

Probab=88.15  E-value=1.5  Score=31.75  Aligned_cols=107  Identities=12%  Similarity=0.177  Sum_probs=53.3

Q ss_pred             CCCCEEEEcCCCCh-------------HHHHHHHHHHHcCCeEEEEeCCcchHHHHHHHHHhhCCCcEEEEEccCCCHHH
Q 044010           45 VSGKVVIITGASSG-------------IGEHLAYEYARRGACLALCARREKSLEEVADTAREIGSPDVITIRADVSKVDD  111 (248)
Q Consensus        45 ~~~k~~lVtGg~~g-------------IG~aia~~l~~~G~~V~l~~r~~~~~~~~~~~l~~~~~~~v~~~~~D~~~~~~  111 (248)
                      +++|++++.|-|--             -+..+++.|-.++.+|+-.+..........+                      
T Consensus         1 ~~~~ti~~~GDS~~~g~~~~~~~~~~Gw~~~L~~~l~~~~~~v~N~gi~G~t~~~~~~----------------------   58 (208)
T d2o14a2           1 VTNRTIYVGGDSTVCNYYPLNSSKQAGWGQMLPHYIDKHTFQVRNMASGGQIARGFRN----------------------   58 (208)
T ss_dssp             CCCCEEEEEECTTTSCCSSTTTCSBCCHHHHGGGTSCTTTCEEEECCCTTCCHHHHHH----------------------
T ss_pred             CCCCEEEEEEcccccCcCCCCCCCCCCHHHHHHHHhCCCceEEEeCeechhhhccHhh----------------------
Confidence            47899999998822             3333444443345565544444332222111                      


Q ss_pred             HHHHHHHHHhHcCCccEEEEccccCCcccccccCChHHHHHHHHhhhHHHHHHHHHHhhhhhhcCCeEEEEcCcc
Q 044010          112 CRSLVEETMNHFGRLDHLVNNAGISSVALFEDIVNITDFKQIMNINFWGSVYTTRFAVPHLRYTKGKIVVLSSAA  186 (248)
Q Consensus       112 ~~~~~~~~~~~~g~id~vv~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~g~iV~isS~~  186 (248)
                       ...+.++.....+.|++|...|......... .+.+.+.+.    +       +.+...+++.+..++.++...
T Consensus        59 -~~~~~~~~~~~~~~D~vvi~~G~ND~~~~~~-~~~~~~~~~----l-------~~li~~~~~~~~~~vl~~~~~  120 (208)
T d2o14a2          59 -DGQLEAILKYIKPGDYFMLQLGINDTNPKHK-ESEAEFKEV----M-------RDMIRQVKAKGADVILSTPQG  120 (208)
T ss_dssp             -SSHHHHHHTTCCTTCEEEEECCTGGGCGGGC-CCHHHHHHH----H-------HHHHHHHHTTTCEEEEECCCC
T ss_pred             -hhhHHHHHHhcCCCCEEEEEcCCCccccccc-ccHHHHHHH----H-------HHHHHHHHhcCCceeeccccc
Confidence             0123333344556799999988765332222 233443332    2       222333344455677776544

>d1i1na_ c.66.1.7 (A:) Protein-L-isoaspartyl O-methyltransferase {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: S-adenosyl-L-methionine-dependent methyltransferases
superfamily: S-adenosyl-L-methionine-dependent methyltransferases
family: Protein-L-isoaspartyl O-methyltransferase
domain: Protein-L-isoaspartyl O-methyltransferase
species: Human (Homo sapiens) [TaxId: 9606]

Probab=87.67  E-value=1.1  Score=33.88  Aligned_cols=81  Identities=14%  Similarity=0.040  Sum_probs=59.6

Q ss_pred             CCCEEEEcCCCChHHHHHHHHHHHcCCeEEEEeCCcchHHHHHHHHHhhC-----CCcEEEEEccCCCHHHHHHHHHHHH
Q 044010           46 SGKVVIITGASSGIGEHLAYEYARRGACLALCARREKSLEEVADTAREIG-----SPDVITIRADVSKVDDCRSLVEETM  120 (248)
Q Consensus        46 ~~k~~lVtGg~~gIG~aia~~l~~~G~~V~l~~r~~~~~~~~~~~l~~~~-----~~~v~~~~~D~~~~~~~~~~~~~~~  120 (248)
                      +|.++|-.|+++|--.++.-++.....+|+.++++++-.+.+.+.+++.+     ...+.+...|..+..          
T Consensus        76 ~g~~VLdiG~GsGy~ta~la~l~~~~g~V~~ie~~~~l~~~a~~~l~~~~~~~~~~~~~~~~~gD~~~~~----------  145 (224)
T d1i1na_          76 EGAKALDVGSGSGILTACFARMVGCTGKVIGIDHIKELVDDSVNNVRKDDPTLLSSGRVQLVVGDGRMGY----------  145 (224)
T ss_dssp             TTCEEEEETCTTSHHHHHHHHHHCTTCEEEEEESCHHHHHHHHHHHHHHCTHHHHTSSEEEEESCGGGCC----------
T ss_pred             CCCeEEEecCCCCHHHHHHHHHhCCCceEEEEcCCHHHHHHHHHhccccCcccccccceEEEEeeccccc----------
Confidence            47799999999887777777777767799999999988888777776543     235677777764321          


Q ss_pred             hHcCCccEEEEccccC
Q 044010          121 NHFGRLDHLVNNAGIS  136 (248)
Q Consensus       121 ~~~g~id~vv~~ag~~  136 (248)
                      ...+.+|.++.+++..
T Consensus       146 ~~~~~fD~I~~~~~~~  161 (224)
T d1i1na_         146 AEEAPYDAIHVGAAAP  161 (224)
T ss_dssp             GGGCCEEEEEECSBBS
T ss_pred             chhhhhhhhhhhcchh
Confidence            1235799999988754

>d1ws6a1 c.66.1.46 (A:15-185) Methyltransferase TTHA0928 {Thermus thermophilus [TaxId: 274]}

class: Alpha and beta proteins (a/b)
fold: S-adenosyl-L-methionine-dependent methyltransferases
superfamily: S-adenosyl-L-methionine-dependent methyltransferases
family: YhhF-like
domain: Methyltransferase TTHA0928
species: Thermus thermophilus [TaxId: 274]

Probab=87.61  E-value=2.5  Score=30.15  Aligned_cols=78  Identities=14%  Similarity=0.149  Sum_probs=47.6

Q ss_pred             CCCEEEEc-CCCChHHHHHHHHHHHcCCeEEEEeCCcchHHHHHHHHHhhCCCcEEEEEccCCCHHHHHHHHHHHHhHcC
Q 044010           46 SGKVVIIT-GASSGIGEHLAYEYARRGACLALCARREKSLEEVADTAREIGSPDVITIRADVSKVDDCRSLVEETMNHFG  124 (248)
Q Consensus        46 ~~k~~lVt-Gg~~gIG~aia~~l~~~G~~V~l~~r~~~~~~~~~~~l~~~~~~~v~~~~~D~~~~~~~~~~~~~~~~~~g  124 (248)
                      +|+++|=. .|+|++|.    .++++|++|+.++.++...+.+.+.++..+- ...+...|   .+   .+.........
T Consensus        41 ~g~~vLDl~~G~G~~~i----~a~~~ga~vv~vD~~~~a~~~~~~N~~~~~~-~~~v~~~~---~d---~~~~~~~~~~~  109 (171)
T d1ws6a1          41 RRGRFLDPFAGSGAVGL----EAASEGWEAVLVEKDPEAVRLLKENVRRTGL-GARVVALP---VE---VFLPEAKAQGE  109 (171)
T ss_dssp             TCCEEEEETCSSCHHHH----HHHHTTCEEEEECCCHHHHHHHHHHHHHHTC-CCEEECSC---HH---HHHHHHHHTTC
T ss_pred             CCCeEEEeccccchhhh----hhhhccchhhhcccCHHHHhhhhHHHHhhcc-ccceeeee---hh---cccccccccCC
Confidence            56666644 44566664    3556899999999999888888777776553 22233222   22   12222233345


Q ss_pred             CccEEEEccc
Q 044010          125 RLDHLVNNAG  134 (248)
Q Consensus       125 ~id~vv~~ag  134 (248)
                      ++|+++.+..
T Consensus       110 ~fD~If~DPP  119 (171)
T d1ws6a1         110 RFTVAFMAPP  119 (171)
T ss_dssp             CEEEEEECCC
T ss_pred             ccceeEEccc
Confidence            7999988854

>d1ihua2 c.37.1.10 (A:308-586) Arsenite-translocating ATPase ArsA {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: P-loop containing nucleoside triphosphate hydrolases
superfamily: P-loop containing nucleoside triphosphate hydrolases
family: Nitrogenase iron protein-like
domain: Arsenite-translocating ATPase ArsA
species: Escherichia coli [TaxId: 562]

Probab=87.51  E-value=0.25  Score=38.32  Aligned_cols=37  Identities=19%  Similarity=0.261  Sum_probs=30.9

Q ss_pred             CCCEEEEcCCCChHHHH-----HHHHHHHcCCeEEEEeCCcc
Q 044010           46 SGKVVIITGASSGIGEH-----LAYEYARRGACLALCARREK   82 (248)
Q Consensus        46 ~~k~~lVtGg~~gIG~a-----ia~~l~~~G~~V~l~~r~~~   82 (248)
                      .++.++|+.|=||.|+.     +|..|+++|.+|++++-++.
T Consensus        18 ~~~~iii~sGKGGVGKTT~a~nLA~~lA~~G~rVllvD~Dp~   59 (279)
T d1ihua2          18 NEHGLIMLMGKGGVGKTTMAAAIAVRLADMGFDVHLTTSDPA   59 (279)
T ss_dssp             TSCEEEEEECSTTSSHHHHHHHHHHHHHHTTCCEEEEESCCC
T ss_pred             CCCEEEEEECCCCCCHHHHHHHHHHHHHHCCCcEEEEeCCCC
Confidence            56777888789998866     47899999999999999865

>d1f0ka_ c.87.1.2 (A:) Peptidoglycan biosynthesis glycosyltransferase MurG {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: UDP-Glycosyltransferase/glycogen phosphorylase
superfamily: UDP-Glycosyltransferase/glycogen phosphorylase
family: Peptidoglycan biosynthesis glycosyltransferase MurG
domain: Peptidoglycan biosynthesis glycosyltransferase MurG
species: Escherichia coli [TaxId: 562]

Probab=87.35  E-value=0.33  Score=38.33  Aligned_cols=33  Identities=15%  Similarity=0.259  Sum_probs=22.4

Q ss_pred             CEEEEcCCCCh--H--HHHHHHHHHHcCCeEEEEeCC
Q 044010           48 KVVIITGASSG--I--GEHLAYEYARRGACLALCARR   80 (248)
Q Consensus        48 k~~lVtGg~~g--I--G~aia~~l~~~G~~V~l~~r~   80 (248)
                      |+++|++|+.|  +  +.+++++|.++|++|.+++..
T Consensus         1 kkili~~~GtGGHv~~a~al~~~L~~~G~eV~~i~~~   37 (351)
T d1f0ka_           1 KRLMVMAGGTGGHVFPGLAVAHHLMAQGWQVRWLGTA   37 (351)
T ss_dssp             CEEEEECCSSHHHHHHHHHHHHHHHTTTCEEEEEECT
T ss_pred             CEEEEEcCCcHHHHHHHHHHHHHHHhCCCEEEEEEeC
Confidence            45555554434  2  346899999999999887654

>d2b3ta1 c.66.1.30 (A:2-275) N5-glutamine methyltransferase, HemK {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: S-adenosyl-L-methionine-dependent methyltransferases
superfamily: S-adenosyl-L-methionine-dependent methyltransferases
family: N5-glutamine methyltransferase, HemK
domain: N5-glutamine methyltransferase, HemK
species: Escherichia coli [TaxId: 562]

Probab=86.80  E-value=1.4  Score=34.44  Aligned_cols=78  Identities=13%  Similarity=0.099  Sum_probs=56.5

Q ss_pred             CEEEEcCC-CChHHHHHHHHHHHcCCeEEEEeCCcchHHHHHHHHHhhCCCcEEEEEccCCCHHHHHHHHHHHHhHcCCc
Q 044010           48 KVVIITGA-SSGIGEHLAYEYARRGACLALCARREKSLEEVADTAREIGSPDVITIRADVSKVDDCRSLVEETMNHFGRL  126 (248)
Q Consensus        48 k~~lVtGg-~~gIG~aia~~l~~~G~~V~l~~r~~~~~~~~~~~l~~~~~~~v~~~~~D~~~~~~~~~~~~~~~~~~g~i  126 (248)
                      ..+|=.|+ ||-||.++++.+  ...+|+.++.++...+-+.+..+..+-.++.++..|..+.-           ..+++
T Consensus       110 ~~vlDlGtGSG~I~i~la~~~--p~~~v~avDis~~Al~~A~~Na~~~~~~~v~~~~~d~~~~~-----------~~~~f  176 (274)
T d2b3ta1         110 CRILDLGTGTGAIALALASER--PDCEIIAVDRMPDAVSLAQRNAQHLAIKNIHILQSDWFSAL-----------AGQQF  176 (274)
T ss_dssp             CEEEEETCTTSHHHHHHHHHC--TTSEEEEECSSHHHHHHHHHHHHHHTCCSEEEECCSTTGGG-----------TTCCE
T ss_pred             cceeeeehhhhHHHHHHHhhC--CcceeeeccchhHHHhHHHHHHHHhCcccceeeeccccccc-----------CCCce
Confidence            34555554 466777776644  34699999999988888888887777656999999986541           11489


Q ss_pred             cEEEEccccCCc
Q 044010          127 DHLVNNAGISSV  138 (248)
Q Consensus       127 d~vv~~ag~~~~  138 (248)
                      |++|.|..+.+.
T Consensus       177 DlIvsNPPYi~~  188 (274)
T d2b3ta1         177 AMIVSNPPYIDE  188 (274)
T ss_dssp             EEEEECCCCBCT
T ss_pred             eEEEecchhhhh
Confidence            999999887653

>d1q1ra1 c.3.1.5 (A:2-114,A:248-319) Putidaredoxin reductase {Pseudomonas putida [TaxId: 303]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: FAD/NAD-linked reductases, N-terminal and central domains
domain: Putidaredoxin reductase
species: Pseudomonas putida [TaxId: 303]

Probab=86.05  E-value=0.38  Score=34.49  Aligned_cols=30  Identities=20%  Similarity=0.257  Sum_probs=24.7

Q ss_pred             CCCEEEEcCCCChHHHHHHHHHHHcCCeEEE
Q 044010           46 SGKVVIITGASSGIGEHLAYEYARRGACLAL   76 (248)
Q Consensus        46 ~~k~~lVtGg~~gIG~aia~~l~~~G~~V~l   76 (248)
                      +++.++|.|| |.+|..+|..|.+.|.++.+
T Consensus         2 ~~~~VvIIGg-G~~G~e~A~~l~~~g~~v~v   31 (185)
T d1q1ra1           2 ANDNVVIVGT-GLAGVEVAFGLRASGWEGNI   31 (185)
T ss_dssp             CSCEEEEECC-SHHHHHHHHHHHHTTCCSEE
T ss_pred             CCCCEEEECC-cHHHHHHHHHHHHcCCceEE
Confidence            5678888876 89999999999999986433

>d1kl7a_ c.79.1.1 (A:) Threonine synthase {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]}

class: Alpha and beta proteins (a/b)
fold: Tryptophan synthase beta subunit-like PLP-dependent enzymes
superfamily: Tryptophan synthase beta subunit-like PLP-dependent enzymes
family: Tryptophan synthase beta subunit-like PLP-dependent enzymes
domain: Threonine synthase
species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]

Probab=86.04  E-value=2.8  Score=35.69  Aligned_cols=76  Identities=14%  Similarity=0.278  Sum_probs=50.7

Q ss_pred             CCCEEEEcCC-CChHHHHHHHHHHHc-CCeEEEEeCCcchHHHHHHHHHhhCCCcEEEEEccCCCHHHHHHHHHHHHhH
Q 044010           46 SGKVVIITGA-SSGIGEHLAYEYARR-GACLALCARREKSLEEVADTAREIGSPDVITIRADVSKVDDCRSLVEETMNH  122 (248)
Q Consensus        46 ~~k~~lVtGg-~~gIG~aia~~l~~~-G~~V~l~~r~~~~~~~~~~~l~~~~~~~v~~~~~D~~~~~~~~~~~~~~~~~  122 (248)
                      ++|.+.|.|| ||-.|.|.+..+... +.+|++..-...-.+--..++....+..++.+.+| .+.++++.+++++..+
T Consensus       149 ~~~~~~il~aTSGDTG~Aa~~af~~~~~i~v~vlyP~~~vS~iQ~~Qmtt~~~~Nv~~i~v~-G~fDDcq~~vk~~f~d  226 (511)
T d1kl7a_         149 EKKQITVVGATSGDTGSAAIYGLRGKKDVSVFILYPTGRISPIQEEQMTTVPDENVQTLSVT-GTFDNCQDIVKAIFGD  226 (511)
T ss_dssp             SCCCEEEEEECSSSHHHHHHHHHTTCTTEEEEEEEETTSSCHHHHHHHHHCCCTTEEEEEES-SCHHHHHHHHHHHHHC
T ss_pred             cCceEEEEEecCCCccHHHHHHhcCCCCceeEEeccCCCCchHHHHHHhhcCCceEEEEEec-cChHHHHHHHHHHHhh
Confidence            4455555555 577999999999854 66888876654222211223444444578888888 5889999999988754

>d1dusa_ c.66.1.4 (A:) Hypothetical protein MJ0882 {Archaeon Methanococcus jannaschii [TaxId: 2190]}

class: Alpha and beta proteins (a/b)
fold: S-adenosyl-L-methionine-dependent methyltransferases
superfamily: S-adenosyl-L-methionine-dependent methyltransferases
family: Hypothetical protein MJ0882
domain: Hypothetical protein MJ0882
species: Archaeon Methanococcus jannaschii [TaxId: 2190]

Probab=85.98  E-value=2.1  Score=31.06  Aligned_cols=78  Identities=9%  Similarity=0.160  Sum_probs=54.0

Q ss_pred             CCCCCEEEEcCCCChHHHHHHHHHHHcCCeEEEEeCCcchHHHHHHHHHhhC--CCcEEEEEccCCCHHHHHHHHHHHHh
Q 044010           44 DVSGKVVIITGASSGIGEHLAYEYARRGACLALCARREKSLEEVADTAREIG--SPDVITIRADVSKVDDCRSLVEETMN  121 (248)
Q Consensus        44 ~~~~k~~lVtGg~~gIG~aia~~l~~~G~~V~l~~r~~~~~~~~~~~l~~~~--~~~v~~~~~D~~~~~~~~~~~~~~~~  121 (248)
                      ..+++++|=.|++.|   .++..+++.+.+|..++.++...+.+.+.++..+  ..++.++..|..+.  +.        
T Consensus        50 ~~~~~~VLDiGcG~G---~~~~~la~~~~~v~~iD~s~~~i~~a~~n~~~~~l~~~~i~~~~~d~~~~--~~--------  116 (194)
T d1dusa_          50 VDKDDDILDLGCGYG---VIGIALADEVKSTTMADINRRAIKLAKENIKLNNLDNYDIRVVHSDLYEN--VK--------  116 (194)
T ss_dssp             CCTTCEEEEETCTTS---HHHHHHGGGSSEEEEEESCHHHHHHHHHHHHHTTCTTSCEEEEECSTTTT--CT--------
T ss_pred             cCCCCeEEEEeecCC---hhHHHHHhhccccceeeeccccchhHHHHHHHhCCccceEEEEEcchhhh--hc--------
Confidence            446788888888765   2234456678899999999877777766665443  34688899998653  11        


Q ss_pred             HcCCccEEEEcccc
Q 044010          122 HFGRLDHLVNNAGI  135 (248)
Q Consensus       122 ~~g~id~vv~~ag~  135 (248)
                       -+.+|+++.|..+
T Consensus       117 -~~~fD~Ii~~~p~  129 (194)
T d1dusa_         117 -DRKYNKIITNPPI  129 (194)
T ss_dssp             -TSCEEEEEECCCS
T ss_pred             -cCCceEEEEcccE
Confidence             1379999988654

>d2csua3 c.23.4.1 (A:291-453) Acetate-CoA ligase alpha chain, AcdA, domains 2 and 3 {Pyrococcus horikoshii [TaxId: 53953]}

class: Alpha and beta proteins (a/b)
fold: Flavodoxin-like
superfamily: Succinyl-CoA synthetase domains
family: Succinyl-CoA synthetase domains
domain: Acetate-CoA ligase alpha chain, AcdA, domains 2 and 3
species: Pyrococcus horikoshii [TaxId: 53953]

Probab=85.84  E-value=1.3  Score=31.25  Aligned_cols=83  Identities=22%  Similarity=0.248  Sum_probs=50.9

Q ss_pred             CCCEEEEcCCCChHHHHHHHHHHHcCCeEEEEeCCcchHHHHHHHHHhhCCCcEE-EEEccC---CCHHHHHHHHHHHHh
Q 044010           46 SGKVVIITGASSGIGEHLAYEYARRGACLALCARREKSLEEVADTAREIGSPDVI-TIRADV---SKVDDCRSLVEETMN  121 (248)
Q Consensus        46 ~~k~~lVtGg~~gIG~aia~~l~~~G~~V~l~~r~~~~~~~~~~~l~~~~~~~v~-~~~~D~---~~~~~~~~~~~~~~~  121 (248)
                      +|+++.|.+.+||.|.-++-.+.+.|-++.-.  ++    +..+++++.-+.... -=.+|+   .+.+...++++.+.+
T Consensus         2 ~G~rvaiit~sGG~~~l~aD~~~~~Gl~l~~l--~~----~t~~~L~~~lp~~~~~~NPlD~~~~~~~~~~~~~l~~~~~   75 (163)
T d2csua3           2 RGNKVAIMTNAGGPGVLTADELDKRGLKLATL--EE----KTIEELRSFLPPMAAVKNPVDMIASARGEDYYRTAKLLLQ   75 (163)
T ss_dssp             SSSEEEEEESCHHHHHHHHHHHHTTTCEECCC--CH----HHHHHHHHHSCTTCEESSEEECCTTCCHHHHHHHHHHHHH
T ss_pred             CCCeEEEEECChHHHHHHHHHHHHcCCccCCC--CH----HHHHHHHHhCCCcccCCCcccccCCCCHHHHHHHHHHHHc
Confidence            68888888899999999999999899665322  22    334444443221111 112333   345667777776655


Q ss_pred             HcCCccEEEEcccc
Q 044010          122 HFGRLDHLVNNAGI  135 (248)
Q Consensus       122 ~~g~id~vv~~ag~  135 (248)
                      + +.+|.++.....
T Consensus        76 d-~~vd~v~v~~~~   88 (163)
T d2csua3          76 D-PNVDMLIAICVV   88 (163)
T ss_dssp             S-TTCSEEEEEEEC
T ss_pred             C-CCcCEEEEeecc
Confidence            4 578887655443

>d1g3qa_ c.37.1.10 (A:) Cell division regulator MinD {Archaeon Pyrococcus furiosus [TaxId: 2261]}

class: Alpha and beta proteins (a/b)
fold: P-loop containing nucleoside triphosphate hydrolases
superfamily: P-loop containing nucleoside triphosphate hydrolases
family: Nitrogenase iron protein-like
domain: Cell division regulator MinD
species: Archaeon Pyrococcus furiosus [TaxId: 2261]

Probab=85.49  E-value=0.37  Score=36.10  Aligned_cols=34  Identities=21%  Similarity=0.433  Sum_probs=28.8

Q ss_pred             CCEEEEcCCCChHHH-----HHHHHHHHcCCeEEEEeCC
Q 044010           47 GKVVIITGASSGIGE-----HLAYEYARRGACLALCARR   80 (248)
Q Consensus        47 ~k~~lVtGg~~gIG~-----aia~~l~~~G~~V~l~~r~   80 (248)
                      ||++.|+|+-||.|.     .+|..|+++|.+|.+++-+
T Consensus         2 ~~vIav~~~kGGvGKTtia~nLA~~la~~g~~VlliD~D   40 (237)
T d1g3qa_           2 GRIISIVSGKGGTGKTTVTANLSVALGDRGRKVLAVDGD   40 (237)
T ss_dssp             CEEEEEECSSTTSSHHHHHHHHHHHHHHTTCCEEEEECC
T ss_pred             CeEEEEECCCCCCcHHHHHHHHHHHHHhCCCCEEEEeCC
Confidence            688999999999875     5777888899999999865

>d1feca2 c.3.1.5 (A:170-286) Trypanothione reductase {Crithidia fasciculata [TaxId: 5656]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: FAD/NAD-linked reductases, N-terminal and central domains
domain: Trypanothione reductase
species: Crithidia fasciculata [TaxId: 5656]

Probab=84.90  E-value=1.7  Score=28.72  Aligned_cols=34  Identities=24%  Similarity=0.281  Sum_probs=27.1

Q ss_pred             CCEEEEcCCCChHHHHHHHHHHH---cCCeEEEEeCCc
Q 044010           47 GKVVIITGASSGIGEHLAYEYAR---RGACLALCARRE   81 (248)
Q Consensus        47 ~k~~lVtGg~~gIG~aia~~l~~---~G~~V~l~~r~~   81 (248)
                      .|+++|.|| |.+|..+|..|.+   .|.+|.++.|.+
T Consensus        18 p~~v~IiGg-G~ig~E~A~~l~~~~~~g~~Vtli~~~~   54 (117)
T d1feca2          18 PKRALCVGG-GYISIEFAGIFNAYKARGGQVDLAYRGD   54 (117)
T ss_dssp             CSEEEEECS-SHHHHHHHHHHHHHSCTTCEEEEEESSS
T ss_pred             CCeEEEECC-ChHHHHHHHHhHhhcccccccceecccc
Confidence            468888877 8999999987665   488999998864

>d1aoga2 c.3.1.5 (A:170-286) Trypanothione reductase {Trypanosoma cruzi [TaxId: 5693]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: FAD/NAD-linked reductases, N-terminal and central domains
domain: Trypanothione reductase
species: Trypanosoma cruzi [TaxId: 5693]

Probab=84.62  E-value=1.2  Score=29.63  Aligned_cols=34  Identities=24%  Similarity=0.351  Sum_probs=26.3

Q ss_pred             CCEEEEcCCCChHHHHHHHHHHH---cCCeEEEEeCCc
Q 044010           47 GKVVIITGASSGIGEHLAYEYAR---RGACLALCARRE   81 (248)
Q Consensus        47 ~k~~lVtGg~~gIG~aia~~l~~---~G~~V~l~~r~~   81 (248)
                      .|+++|.|| |.+|..+|..|.+   +|.+|.++.|.+
T Consensus        20 p~~v~ivGg-G~ig~E~A~~l~~l~~~~~~Vtli~~~~   56 (117)
T d1aoga2          20 PRRVLTVGG-GFISVEFAGIFNAYKPKDGQVTLCYRGE   56 (117)
T ss_dssp             CSEEEEECS-SHHHHHHHHHHHHHCCTTCEEEEEESSS
T ss_pred             CCeEEEECC-cHHHHHHHHHhhhcccCCcEEEEEeccc
Confidence            467888877 8999999976655   456799988855

>d1yb2a1 c.66.1.13 (A:6-255) Hypothetical protein Ta0852 {Thermoplasma acidophilum [TaxId: 2303]}

class: Alpha and beta proteins (a/b)
fold: S-adenosyl-L-methionine-dependent methyltransferases
superfamily: S-adenosyl-L-methionine-dependent methyltransferases
family: tRNA(1-methyladenosine) methyltransferase-like
domain: Hypothetical protein Ta0852
species: Thermoplasma acidophilum [TaxId: 2303]

Probab=84.10  E-value=1.5  Score=33.62  Aligned_cols=75  Identities=21%  Similarity=0.335  Sum_probs=55.9

Q ss_pred             CCCEEEEcCCCC-hHHHHHHHHHHHcCCeEEEEeCCcchHHHHHHHHHhhC-CCcEEEEEccCCCHHHHHHHHHHHHhHc
Q 044010           46 SGKVVIITGASS-GIGEHLAYEYARRGACLALCARREKSLEEVADTAREIG-SPDVITIRADVSKVDDCRSLVEETMNHF  123 (248)
Q Consensus        46 ~~k~~lVtGg~~-gIG~aia~~l~~~G~~V~l~~r~~~~~~~~~~~l~~~~-~~~v~~~~~D~~~~~~~~~~~~~~~~~~  123 (248)
                      .|.++|=.|+++ ++...+|+.+...| +|+.++++++..+.+.+.+++.+ ...+.+...|+.+.-      .     -
T Consensus        85 pG~rVLEiG~GsG~lt~~la~~v~~~g-~V~~vD~~e~~~~~A~~n~~~~~~~~nv~~~~~Di~~~~------~-----~  152 (250)
T d1yb2a1          85 PGMDILEVGVGSGNMSSYILYALNGKG-TLTVVERDEDNLKKAMDNLSEFYDIGNVRTSRSDIADFI------S-----D  152 (250)
T ss_dssp             TTCEEEEECCTTSHHHHHHHHHHTTSS-EEEEECSCHHHHHHHHHHHHTTSCCTTEEEECSCTTTCC------C-----S
T ss_pred             CcCEEEEeeeeCcHHHHHHHHHhCCCc-EEEEEECCHHHHHHHHHHHHHhcCCCceEEEEeeeeccc------c-----c
Confidence            478999898875 46777777765444 99999999998888888887754 357888999987631      0     1


Q ss_pred             CCccEEEEc
Q 044010          124 GRLDHLVNN  132 (248)
Q Consensus       124 g~id~vv~~  132 (248)
                      +.+|.++.+
T Consensus       153 ~~fD~V~ld  161 (250)
T d1yb2a1         153 QMYDAVIAD  161 (250)
T ss_dssp             CCEEEEEEC
T ss_pred             ceeeeeeec
Confidence            368988865

>d2ex4a1 c.66.1.42 (A:2-224) Adrenal gland protein AD-003 (C9orf32) {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: S-adenosyl-L-methionine-dependent methyltransferases
superfamily: S-adenosyl-L-methionine-dependent methyltransferases
family: AD-003 protein-like
domain: Adrenal gland protein AD-003 (C9orf32)
species: Human (Homo sapiens) [TaxId: 9606]

Probab=84.06  E-value=1  Score=33.58  Aligned_cols=79  Identities=11%  Similarity=-0.024  Sum_probs=54.5

Q ss_pred             CCCCCEEEEcCCCChHHHHHHHHHHHc-CCeEEEEeCCcchHHHHHHHHHhhCCCcEEEEEccCCCHHHHHHHHHHHHhH
Q 044010           44 DVSGKVVIITGASSGIGEHLAYEYARR-GACLALCARREKSLEEVADTAREIGSPDVITIRADVSKVDDCRSLVEETMNH  122 (248)
Q Consensus        44 ~~~~k~~lVtGg~~gIG~aia~~l~~~-G~~V~l~~r~~~~~~~~~~~l~~~~~~~v~~~~~D~~~~~~~~~~~~~~~~~  122 (248)
                      ...++++|=.|++.|.   .+..|+++ +.+|..++-+++..+.+.+..+..+...+.++++|+.+..          -.
T Consensus        58 ~~~~~~vLDiGcG~G~---~~~~l~~~~~~~v~~vD~s~~~l~~ak~~~~~~~~~~~~f~~~d~~~~~----------~~  124 (222)
T d2ex4a1          58 KTGTSCALDCGAGIGR---ITKRLLLPLFREVDMVDITEDFLVQAKTYLGEEGKRVRNYFCCGLQDFT----------PE  124 (222)
T ss_dssp             CCCCSEEEEETCTTTH---HHHHTTTTTCSEEEEEESCHHHHHHHHHHTGGGGGGEEEEEECCGGGCC----------CC
T ss_pred             CCCCCEEEEeccCCCH---hhHHHHHhcCCEEEEeecCHHHhhccccccccccccccccccccccccc----------cc
Confidence            4467789999988664   34444545 4489999998888887777766655546788999887642          01


Q ss_pred             cCCccEEEEcccc
Q 044010          123 FGRLDHLVNNAGI  135 (248)
Q Consensus       123 ~g~id~vv~~ag~  135 (248)
                      -+.+|+++.....
T Consensus       125 ~~~fD~I~~~~~l  137 (222)
T d2ex4a1         125 PDSYDVIWIQWVI  137 (222)
T ss_dssp             SSCEEEEEEESCG
T ss_pred             ccccccccccccc
Confidence            2478998876543

>d3bula2 c.23.6.1 (A:741-896) Methionine synthase, C-terminal domain {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: Flavodoxin-like
superfamily: Cobalamin (vitamin B12)-binding domain
family: Cobalamin (vitamin B12)-binding domain
domain: Methionine synthase, C-terminal domain
species: Escherichia coli [TaxId: 562]

Probab=83.94  E-value=5.3  Score=28.04  Aligned_cols=74  Identities=16%  Similarity=0.197  Sum_probs=51.7

Q ss_pred             hHHHHHHHHHHH-cCCeEEEEeCCcchHHHHHHHHHhhCCCcEEEEEccCC-CHHHHHHHHHHHHhHcCCccEEEEcc
Q 044010           58 GIGEHLAYEYAR-RGACLALCARREKSLEEVADTAREIGSPDVITIRADVS-KVDDCRSLVEETMNHFGRLDHLVNNA  133 (248)
Q Consensus        58 gIG~aia~~l~~-~G~~V~l~~r~~~~~~~~~~~l~~~~~~~v~~~~~D~~-~~~~~~~~~~~~~~~~g~id~vv~~a  133 (248)
                      .||..++..+++ .|++|+-.+.+.+ .++..+...+... ++..+.+=.+ ....+.++++.+++...++-+++-.+
T Consensus        20 diG~~iv~~~l~~~G~~Vi~LG~~~p-~e~~~~~~~~~~~-d~i~lS~l~~~~~~~~~~~~~~l~~~g~~~~vivGG~   95 (156)
T d3bula2          20 DIGKNIVGVVLQCNNYEIVDLGVMVP-AEKILRTAKEVNA-DLIGLSGLITPSLDEMVNVAKEMERQGFTIPLLIGGA   95 (156)
T ss_dssp             CHHHHHHHHHHHTTTCEEEECCSSBC-HHHHHHHHHHHTC-SEEEEECCSTHHHHHHHHHHHHHHHTTCCSCEEEEST
T ss_pred             hHHHHHHHHHHHHCCCEEEECCCCCC-HHHHHHHHHhhCC-CEEEEecccccchHHHHHHHHHHHhccccceEEEecc
Confidence            699999988886 5999999988765 4667776766654 6666654443 45778888888877644554554433

>d1g6q1_ c.66.1.6 (1:) Arginine methyltransferase, HMT1 {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]}

class: Alpha and beta proteins (a/b)
fold: S-adenosyl-L-methionine-dependent methyltransferases
superfamily: S-adenosyl-L-methionine-dependent methyltransferases
family: Arginine methyltransferase
domain: Arginine methyltransferase, HMT1
species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]

Probab=83.52  E-value=2.2  Score=33.80  Aligned_cols=77  Identities=21%  Similarity=0.272  Sum_probs=52.3

Q ss_pred             CCCCCEEEEcCCCChHHHHHHHHHHHcCC-eEEEEeCCcchHHHHHHHHHhhC-CCcEEEEEccCCCHHHHHHHHHHHHh
Q 044010           44 DVSGKVVIITGASSGIGEHLAYEYARRGA-CLALCARREKSLEEVADTAREIG-SPDVITIRADVSKVDDCRSLVEETMN  121 (248)
Q Consensus        44 ~~~~k~~lVtGg~~gIG~aia~~l~~~G~-~V~l~~r~~~~~~~~~~~l~~~~-~~~v~~~~~D~~~~~~~~~~~~~~~~  121 (248)
                      ..+|+++|-.|++.|+   ++..++++|+ +|+.++.++ .++.+.+..++.+ ..++.++..|+.+.+-          
T Consensus        36 ~~~~~~VLDlGcGtG~---ls~~aa~~Ga~~V~avd~s~-~~~~a~~~~~~~~~~~~i~~i~~~~~~l~~----------  101 (328)
T d1g6q1_          36 LFKDKIVLDVGCGTGI---LSMFAAKHGAKHVIGVDMSS-IIEMAKELVELNGFSDKITLLRGKLEDVHL----------  101 (328)
T ss_dssp             HHTTCEEEEETCTTSH---HHHHHHHTCCSEEEEEESST-HHHHHHHHHHHTTCTTTEEEEESCTTTSCC----------
T ss_pred             cCCcCEEEEeCCCCCH---HHHHHHHhCCCEEEEEeCCH-HHHHHHHHHHHhCccccceEEEeehhhccC----------
Confidence            4689999999998774   3455677887 788887764 4555555555444 3478899998876520          


Q ss_pred             HcCCccEEEEccc
Q 044010          122 HFGRLDHLVNNAG  134 (248)
Q Consensus       122 ~~g~id~vv~~ag  134 (248)
                      .-+++|+++...-
T Consensus       102 ~~~~~D~i~se~~  114 (328)
T d1g6q1_         102 PFPKVDIIISEWM  114 (328)
T ss_dssp             SSSCEEEEEECCC
T ss_pred             cccceeEEEEEec
Confidence            1137899887643

>d1lqta1 c.3.1.1 (A:109-324) Ferredoxin:NADP reductase FprA {Mycobacterium tuberculosis [TaxId: 1773]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: C-terminal domain of adrenodoxin reductase-like
domain: Ferredoxin:NADP reductase FprA
species: Mycobacterium tuberculosis [TaxId: 1773]

Probab=83.31  E-value=0.79  Score=34.33  Aligned_cols=40  Identities=25%  Similarity=0.392  Sum_probs=31.1

Q ss_pred             ccCCCCCEEEEcCCCChHHHHHHHHHH--------------------HcCC-eEEEEeCCcc
Q 044010           42 SEDVSGKVVIITGASSGIGEHLAYEYA--------------------RRGA-CLALCARREK   82 (248)
Q Consensus        42 ~~~~~~k~~lVtGg~~gIG~aia~~l~--------------------~~G~-~V~l~~r~~~   82 (248)
                      ..+++||+++|.|+ |-.+.-+|+.++                    +.|. +|.+++|...
T Consensus        34 ~~~~~gk~VvVIGg-GNvAlD~AR~ll~~~~~l~~tdi~~~~l~~l~r~~~~~V~iv~RRg~   94 (216)
T d1lqta1          34 SPDLSGARAVVIGN-GNVALDVARILLTDPDVLARTDIADHALESLRPRGIQEVVIVGRRGP   94 (216)
T ss_dssp             CCCCCSSEEEEECC-SHHHHHHHHHHHSCHHHHTTSCCCHHHHHHHTTCCCCEEEEECSSCG
T ss_pred             CccccCceEEEECC-CchhHhhhhhhccCHhhhccCCCcHHHHHHHhhcCCceEEEEEECCh
Confidence            34678999999987 788888888777                    4576 7888888643

>d1qkia1 c.2.1.3 (A:12-199,A:435-449) Glucose 6-phosphate dehydrogenase, N-terminal domain {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Glyceraldehyde-3-phosphate dehydrogenase-like, N-terminal domain
domain: Glucose 6-phosphate dehydrogenase, N-terminal domain
species: Human (Homo sapiens) [TaxId: 9606]

Probab=83.24  E-value=2.1  Score=31.78  Aligned_cols=76  Identities=13%  Similarity=0.149  Sum_probs=52.0

Q ss_pred             CCCEEEEcCCCChHHHH-HHH---HHHHcC-----CeEEEEeCCcchHHHHHHHHHhhC-------------CCcEEEEE
Q 044010           46 SGKVVIITGASSGIGEH-LAY---EYARRG-----ACLALCARREKSLEEVADTAREIG-------------SPDVITIR  103 (248)
Q Consensus        46 ~~k~~lVtGg~~gIG~a-ia~---~l~~~G-----~~V~l~~r~~~~~~~~~~~l~~~~-------------~~~v~~~~  103 (248)
                      ..-+.+|.||||-+... +-.   +|...|     .+|+.++|.+-..++..+.+.+.-             ..++.++.
T Consensus        19 ~~~t~VIFGatGDLA~RKL~PALf~L~~~g~Lp~~~~Iig~aR~~~s~e~fr~~~~~~~~~~~~~~~~~~~f~~~~~Y~~   98 (203)
T d1qkia1          19 DTHIFIIMGASGDLAKKKIYPTIWWLFRDGLLPENTFIVGYARSRLTVADIRKQSEPFFKATPEEKLKLEDFFARNSYVA   98 (203)
T ss_dssp             CCEEEEEETTTSHHHHHTHHHHHHHHHHTTCSCSSEEEEEEBSSCCSCHHHHHHHSCCTTCCGGGHHHHHHHHTTEECCB
T ss_pred             CCcEEEEECcccHHHHhHHHHHHHHHHHcCCCCCCcEEEEEECCCCCHHHHHHHHHHHHhhchhhHHHHHHHHHhhcccc
Confidence            45679999999998865 333   334444     579999997754444444333211             13688899


Q ss_pred             ccCCCHHHHHHHHHHHHh
Q 044010          104 ADVSKVDDCRSLVEETMN  121 (248)
Q Consensus       104 ~D~~~~~~~~~~~~~~~~  121 (248)
                      +|+++.++.+++-+.+.+
T Consensus        99 ~d~~~~~~~~~L~~~l~~  116 (203)
T d1qkia1          99 GQYDDAASYQRLNSHMNA  116 (203)
T ss_dssp             CCTTCHHHHHHHHHHHHH
T ss_pred             CcCCChhhHHHHHHHHHH
Confidence            999999999888777654

>d1vbfa_ c.66.1.7 (A:) Protein-L-isoaspartyl O-methyltransferase {Sulfolobus tokodaii [TaxId: 111955]}

class: Alpha and beta proteins (a/b)
fold: S-adenosyl-L-methionine-dependent methyltransferases
superfamily: S-adenosyl-L-methionine-dependent methyltransferases
family: Protein-L-isoaspartyl O-methyltransferase
domain: Protein-L-isoaspartyl O-methyltransferase
species: Sulfolobus tokodaii [TaxId: 111955]

Probab=82.94  E-value=1.6  Score=32.98  Aligned_cols=75  Identities=16%  Similarity=0.024  Sum_probs=51.3

Q ss_pred             CCCEEEEcCCCChHHHHHHHHHHHcCCeEEEEeCCcchHHHHHHHHHhhCCCcEEEEEccCCCHHHHHHHHHHHHhHcCC
Q 044010           46 SGKVVIITGASSGIGEHLAYEYARRGACLALCARREKSLEEVADTAREIGSPDVITIRADVSKVDDCRSLVEETMNHFGR  125 (248)
Q Consensus        46 ~~k~~lVtGg~~gIG~aia~~l~~~G~~V~l~~r~~~~~~~~~~~l~~~~~~~v~~~~~D~~~~~~~~~~~~~~~~~~g~  125 (248)
                      +|.++|-.|+++|--.+   .|++.+.+|+-+.++++..+.+.+.+...  ..+.++..|..+-          ..+.++
T Consensus        70 ~g~~VLdIG~GsGy~ta---~La~l~~~V~aiE~~~~~~~~A~~~~~~~--~nv~~~~~d~~~g----------~~~~~p  134 (224)
T d1vbfa_          70 KGQKVLEIGTGIGYYTA---LIAEIVDKVVSVEINEKMYNYASKLLSYY--NNIKLILGDGTLG----------YEEEKP  134 (224)
T ss_dssp             TTCEEEEECCTTSHHHH---HHHHHSSEEEEEESCHHHHHHHHHHHTTC--SSEEEEESCGGGC----------CGGGCC
T ss_pred             ccceEEEecCCCCHHHH---HHHHHhcccccccccHHHHHHHHHHHhcc--cccccccCchhhc----------chhhhh
Confidence            56789999988775443   35555679999999887666665554432  3688888887441          122357


Q ss_pred             ccEEEEcccc
Q 044010          126 LDHLVNNAGI  135 (248)
Q Consensus       126 id~vv~~ag~  135 (248)
                      +|.++.+++.
T Consensus       135 fD~Iiv~~a~  144 (224)
T d1vbfa_         135 YDRVVVWATA  144 (224)
T ss_dssp             EEEEEESSBB
T ss_pred             HHHHHhhcch
Confidence            9999988875

>d1krwa_ c.23.1.1 (A:) NTRC receiver domain {Salmonella typhimurium [TaxId: 90371]}

class: Alpha and beta proteins (a/b)
fold: Flavodoxin-like
superfamily: CheY-like
family: CheY-related
domain: NTRC receiver domain
species: Salmonella typhimurium [TaxId: 90371]

Probab=82.78  E-value=4.8  Score=26.68  Aligned_cols=81  Identities=16%  Similarity=0.143  Sum_probs=53.0

Q ss_pred             CCCCEEEEcCCCChHHHHHHHHHHHcCCeEEEEeCCcchHHHHHHHHHhhCCCcEEEEEccCCC--HHHHHHHHHHHHhH
Q 044010           45 VSGKVVIITGASSGIGEHLAYEYARRGACLALCARREKSLEEVADTAREIGSPDVITIRADVSK--VDDCRSLVEETMNH  122 (248)
Q Consensus        45 ~~~k~~lVtGg~~gIG~aia~~l~~~G~~V~l~~r~~~~~~~~~~~l~~~~~~~v~~~~~D~~~--~~~~~~~~~~~~~~  122 (248)
                      |+..++||.=-...+...+.+.|.+.|++|.......    ++.+.+++..   ...+-+|+.-  .+.+ ++++++++.
T Consensus         1 M~k~~ILIVDDd~~~~~~l~~~L~~~g~~v~~a~~~~----~a~~~l~~~~---~dlii~D~~mp~~~G~-el~~~l~~~   72 (123)
T d1krwa_           1 MQRGIVWVVDDDSSIRWVLERALAGAGLTCTTFENGN----EVLAALASKT---PDVLLSDIRMPGMDGL-ALLKQIKQR   72 (123)
T ss_dssp             CCCCEEEEESSSHHHHHHHHHHHHHTTCEEEEESSSH----HHHHHHTTCC---CSEEEECCSSSSSTTH-HHHHHHHHH
T ss_pred             CCCCEEEEEECCHHHHHHHHHHHHHCCCEEEEeCCHH----HHHHHHHhCC---CCEEEehhhcCCchHH-HHHHHHHHh
Confidence            4566899999999999999999999999988754432    3444454432   3345555543  3333 566777777


Q ss_pred             cCCccEEEEcc
Q 044010          123 FGRLDHLVNNA  133 (248)
Q Consensus       123 ~g~id~vv~~a  133 (248)
                      ...+-+++..+
T Consensus        73 ~~~~piI~~t~   83 (123)
T d1krwa_          73 HPMLPVIIMTA   83 (123)
T ss_dssp             SSSCCEEESCC
T ss_pred             CCCCeEEEEec
Confidence            66666665444

>d1y0pa2 c.3.1.4 (A:111-361,A:512-568) Flavocytochrome c3 (respiratory fumarate reductase) {Shewanella frigidimarina [TaxId: 56812]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: Succinate dehydrogenase/fumarate reductase flavoprotein N-terminal domain
domain: Flavocytochrome c3 (respiratory fumarate reductase)
species: Shewanella frigidimarina [TaxId: 56812]

Probab=82.69  E-value=0.63  Score=36.39  Aligned_cols=31  Identities=26%  Similarity=0.402  Sum_probs=27.0

Q ss_pred             EEEcCCCChHHHHHHHHHHHcCCeEEEEeCCc
Q 044010           50 VIITGASSGIGEHLAYEYARRGACLALCARRE   81 (248)
Q Consensus        50 ~lVtGg~~gIG~aia~~l~~~G~~V~l~~r~~   81 (248)
                      ++|.|| |.-|...|..|+++|.+|+++.+..
T Consensus        19 VlVIG~-G~aGl~aA~~la~~G~~V~lvEK~~   49 (308)
T d1y0pa2          19 VVVVGS-GGAGFSAAISATDSGAKVILIEKEP   49 (308)
T ss_dssp             EEEECC-SHHHHHHHHHHHHTTCCEEEECSSS
T ss_pred             EEEECc-CHHHHHHHHHHHHCCCcEEEEecCC
Confidence            777866 7889999999999999999998754

>d1iowa1 c.30.1.2 (A:1-96) D-Ala-D-Ala ligase, N-domain {Escherichia coli, gene ddlB [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: PreATP-grasp domain
superfamily: PreATP-grasp domain
family: D-Alanine ligase N-terminal domain
domain: D-Ala-D-Ala ligase, N-domain
species: Escherichia coli, gene ddlB [TaxId: 562]

Probab=82.25  E-value=1.4  Score=28.57  Aligned_cols=37  Identities=16%  Similarity=0.253  Sum_probs=29.3

Q ss_pred             CCCCEEEEcCCCCh-------HHHHHHHHHHHcCCeEEEEeCCc
Q 044010           45 VSGKVVIITGASSG-------IGEHLAYEYARRGACLALCARRE   81 (248)
Q Consensus        45 ~~~k~~lVtGg~~g-------IG~aia~~l~~~G~~V~l~~r~~   81 (248)
                      |++|.+++.||.+.       -|.++.+.|-+.|+++..++.+.
T Consensus         1 M~~kI~vl~GG~S~E~~iSl~Sa~~v~~~L~~~~~~v~~i~~~~   44 (96)
T d1iowa1           1 MTDKIAVLLGGTSAEREVSLNSGAAVLAGLREGGIDAYPVDPKE   44 (96)
T ss_dssp             CCCEEEEECCCSSTTHHHHHHHHHHHHHHHHHTTCEEEEECTTT
T ss_pred             CCceEEEEeCcCchhhHhHHhhHHHHHHHHHHcCeeEeeecCcc
Confidence            67889999999753       46778888888899988887654

>d2i0za1 c.3.1.8 (A:1-192,A:362-420) Flavoprotein BC4706 {Bacillus cereus [TaxId: 1396]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: HI0933 N-terminal domain-like
domain: Flavoprotein BC4706
species: Bacillus cereus [TaxId: 1396]

Probab=81.91  E-value=0.76  Score=34.55  Aligned_cols=33  Identities=30%  Similarity=0.314  Sum_probs=27.2

Q ss_pred             EEEcCCCChHHHHHHHHHHHcCCeEEEEeCCcch
Q 044010           50 VIITGASSGIGEHLAYEYARRGACLALCARREKS   83 (248)
Q Consensus        50 ~lVtGg~~gIG~aia~~l~~~G~~V~l~~r~~~~   83 (248)
                      ++|.|| |--|..+|..|+++|.+|+++.++...
T Consensus         5 ViIIGa-G~aGl~aA~~la~~G~~V~liEk~~~~   37 (251)
T d2i0za1           5 VIVIGG-GPSGLMAAIGAAEEGANVLLLDKGNKL   37 (251)
T ss_dssp             EEEECC-SHHHHHHHHHHHHTTCCEEEECSSSSS
T ss_pred             EEEECc-CHHHHHHHHHHHHCCCcEEEEeCCCCC
Confidence            567766 567788999999999999999987654

>d2dw4a2 c.3.1.2 (A:274-654,A:764-831) Lysine-specific histone demethylase 1, LSD1 {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: FAD-linked reductases, N-terminal domain
domain: Lysine-specific histone demethylase 1, LSD1
species: Human (Homo sapiens) [TaxId: 9606]

Probab=81.76  E-value=0.97  Score=34.76  Aligned_cols=33  Identities=27%  Similarity=0.225  Sum_probs=26.0

Q ss_pred             CCEEEEcCCCChHHHHHHHHHHHcCCeEEEEeCC
Q 044010           47 GKVVIITGASSGIGEHLAYEYARRGACLALCARR   80 (248)
Q Consensus        47 ~k~~lVtGg~~gIG~aia~~l~~~G~~V~l~~r~   80 (248)
                      .++|+|.|| |-=|...|..|+++|++|.+.-.+
T Consensus         5 ~~kViVIGa-G~aGL~aA~~L~~~G~~V~VlEa~   37 (449)
T d2dw4a2           5 TGKVIIIGS-GVSGLAAARQLQSFGMDVTLLEAR   37 (449)
T ss_dssp             CCEEEEECC-BHHHHHHHHHHHHTTCEEEEECSS
T ss_pred             CCcEEEECC-CHHHHHHHHHHHhCCCCEEEEeCC
Confidence            345888876 566788889999999999998553

>d1gtea3 c.3.1.1 (A:288-440) Dihydropyrimidine dehydrogenase, domain 3 {Pig (Sus scrofa) [TaxId: 9823]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: C-terminal domain of adrenodoxin reductase-like
domain: Dihydropyrimidine dehydrogenase, domain 3
species: Pig (Sus scrofa) [TaxId: 9823]

Probab=81.72  E-value=1.3  Score=31.34  Aligned_cols=34  Identities=29%  Similarity=0.257  Sum_probs=26.7

Q ss_pred             CCEEEEcCCCChHHHHHHHHHHHcCC-eEEEEeCCc
Q 044010           47 GKVVIITGASSGIGEHLAYEYARRGA-CLALCARRE   81 (248)
Q Consensus        47 ~k~~lVtGg~~gIG~aia~~l~~~G~-~V~l~~r~~   81 (248)
                      ++.++|.|| |-.|..+|..+.+.|+ .|.++.|..
T Consensus        45 ~~kVvVIGG-GdtA~D~A~~a~r~GA~~V~vi~rr~   79 (153)
T d1gtea3          45 RGAVIVLGA-GDTAFDCATSALRCGARRVFLVFRKG   79 (153)
T ss_dssp             CSEEEEECS-SHHHHHHHHHHHHTTCSEEEEECSSC
T ss_pred             CCEEEEECC-ChhHHHHHHHHHHcCCcceeEEEeCC
Confidence            456777765 7899999999999998 577877754

>d1inla_ c.66.1.17 (A:) Spermidine synthase {Thermotoga maritima [TaxId: 2336]}

class: Alpha and beta proteins (a/b)
fold: S-adenosyl-L-methionine-dependent methyltransferases
superfamily: S-adenosyl-L-methionine-dependent methyltransferases
family: Spermidine synthase
domain: Spermidine synthase
species: Thermotoga maritima [TaxId: 2336]

Probab=81.57  E-value=2.7  Score=33.09  Aligned_cols=78  Identities=15%  Similarity=0.208  Sum_probs=49.8

Q ss_pred             CCCCEEEEcCCCChHHHHHHHHHHHcC--CeEEEEeCCcchHHHHHHHHHhh----CCCcEEEEEccCCCHHHHHHHHHH
Q 044010           45 VSGKVVIITGASSGIGEHLAYEYARRG--ACLALCARREKSLEEVADTAREI----GSPDVITIRADVSKVDDCRSLVEE  118 (248)
Q Consensus        45 ~~~k~~lVtGg~~gIG~aia~~l~~~G--~~V~l~~r~~~~~~~~~~~l~~~----~~~~v~~~~~D~~~~~~~~~~~~~  118 (248)
                      ..-|.+||.||++|   .+++.+++..  .+|.++..+++..+-+.+.+...    .+.++.++..|....         
T Consensus        88 ~~pk~VLiiGgG~G---~~~r~~l~~~~~~~i~~VEIDp~Vi~~a~~~~~~~~~~~~d~rv~v~~~Da~~~---------  155 (295)
T d1inla_          88 PNPKKVLIIGGGDG---GTLREVLKHDSVEKAILCEVDGLVIEAARKYLKQTSCGFDDPRAEIVIANGAEY---------  155 (295)
T ss_dssp             SSCCEEEEEECTTC---HHHHHHTTSTTCSEEEEEESCHHHHHHHHHHCHHHHGGGGCTTEEEEESCHHHH---------
T ss_pred             CCCceEEEecCCch---HHHHHHHhcCCCceEEEecCCHHHHHHHHHHHHhhcccccCCCcEEEhhhHHHH---------
Confidence            34578999999877   4456666653  47999999987666555543321    245788887776322         


Q ss_pred             HHhHcCCccEEEEccc
Q 044010          119 TMNHFGRLDHLVNNAG  134 (248)
Q Consensus       119 ~~~~~g~id~vv~~ag  134 (248)
                      +.+.-.+.|++|.-.-
T Consensus       156 l~~~~~~yDvIi~D~~  171 (295)
T d1inla_         156 VRKFKNEFDVIIIDST  171 (295)
T ss_dssp             GGGCSSCEEEEEEEC-
T ss_pred             HhcCCCCCCEEEEcCC
Confidence            2223347999987643

>d1v71a1 c.79.1.1 (A:6-323) Hypothetical protein C320.14 (SPCC320.14, SPCC330.15c) {Fission yeast (Schizosaccharomyces pombe) [TaxId: 4896]}

class: Alpha and beta proteins (a/b)
fold: Tryptophan synthase beta subunit-like PLP-dependent enzymes
superfamily: Tryptophan synthase beta subunit-like PLP-dependent enzymes
family: Tryptophan synthase beta subunit-like PLP-dependent enzymes
domain: Hypothetical protein C320.14 (SPCC320.14, SPCC330.15c)
species: Fission yeast (Schizosaccharomyces pombe) [TaxId: 4896]

Probab=81.52  E-value=1.2  Score=35.11  Aligned_cols=25  Identities=16%  Similarity=0.041  Sum_probs=19.0

Q ss_pred             EEEcCCCChHHHHHHHHHHHcCCeE
Q 044010           50 VIITGASSGIGEHLAYEYARRGACL   74 (248)
Q Consensus        50 ~lVtGg~~gIG~aia~~l~~~G~~V   74 (248)
                      .+|++.+|.-|.++|...+..|.++
T Consensus        71 ~vv~~ssGN~g~a~A~~a~~~g~~~   95 (318)
T d1v71a1          71 GVLTFSSGNHAQAIALSAKILGIPA   95 (318)
T ss_dssp             CEEECCSSHHHHHHHHHHHHTTCCE
T ss_pred             eeeeeccchhhHHHHHhhcccccce
Confidence            4777788888888888777777743

>d1w4xa2 c.3.1.5 (A:155-389) Phenylacetone monooxygenase {Thermobifida fusca [TaxId: 2021]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: FAD/NAD-linked reductases, N-terminal and central domains
domain: Phenylacetone monooxygenase
species: Thermobifida fusca [TaxId: 2021]

Probab=81.42  E-value=0.95  Score=33.47  Aligned_cols=38  Identities=26%  Similarity=0.332  Sum_probs=31.8

Q ss_pred             cCCCCCEEEEcCCCChHHHHHHHHHHHcCCeEEEEeCCc
Q 044010           43 EDVSGKVVIITGASSGIGEHLAYEYARRGACLALCARRE   81 (248)
Q Consensus        43 ~~~~~k~~lVtGg~~gIG~aia~~l~~~G~~V~l~~r~~   81 (248)
                      .+++||+|+|.|++ --|..+|..+++.+.++....|..
T Consensus        28 ~~~~gK~V~VvG~G-~Sa~dia~~~~~~~~~~~~~~~~~   65 (235)
T d1w4xa2          28 VDFSGQRVGVIGTG-SSGIQVSPQIAKQAAELFVFQRTP   65 (235)
T ss_dssp             CCCBTCEEEEECCS-HHHHHHHHHHHHHBSEEEEEESSC
T ss_pred             CCCCCCEEEEECCC-ccHHHHHHHHHhhhcccccccccc
Confidence            46899999999874 458999999999999887777754

>d1hyqa_ c.37.1.10 (A:) Cell division regulator MinD {Archaeon Archaeoglobus fulgidus [TaxId: 2234]}

class: Alpha and beta proteins (a/b)
fold: P-loop containing nucleoside triphosphate hydrolases
superfamily: P-loop containing nucleoside triphosphate hydrolases
family: Nitrogenase iron protein-like
domain: Cell division regulator MinD
species: Archaeon Archaeoglobus fulgidus [TaxId: 2234]

Probab=81.29  E-value=0.54  Score=35.08  Aligned_cols=34  Identities=15%  Similarity=0.338  Sum_probs=28.1

Q ss_pred             CEEEEcCCCChHHH-----HHHHHHHHcCCeEEEEeCCc
Q 044010           48 KVVIITGASSGIGE-----HLAYEYARRGACLALCARRE   81 (248)
Q Consensus        48 k~~lVtGg~~gIG~-----aia~~l~~~G~~V~l~~r~~   81 (248)
                      |++.|+++-||.|.     .+|..|+++|.+|.+++-+.
T Consensus         2 kvIav~s~KGGvGKTtia~nlA~~la~~g~~VlliD~D~   40 (232)
T d1hyqa_           2 RTITVASGKGGTGKTTITANLGVALAQLGHDVTIVDADI   40 (232)
T ss_dssp             EEEEEEESSSCSCHHHHHHHHHHHHHHTTCCEEEEECCC
T ss_pred             EEEEEECCCCCChHHHHHHHHHHHHHhCCCCEEEEeCCC
Confidence            67889988888774     56778888999999998764

>d1gtma1 c.2.1.7 (A:181-419) Glutamate dehydrogenase {Archaeon Pyrococcus furiosus [TaxId: 2261]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Aminoacid dehydrogenase-like, C-terminal domain
domain: Glutamate dehydrogenase
species: Archaeon Pyrococcus furiosus [TaxId: 2261]

Probab=81.28  E-value=2.4  Score=32.31  Aligned_cols=36  Identities=22%  Similarity=0.316  Sum_probs=30.1

Q ss_pred             cCCCCCEEEEcCCCChHHHHHHHHHHHc-CCeEEEEeC
Q 044010           43 EDVSGKVVIITGASSGIGEHLAYEYARR-GACLALCAR   79 (248)
Q Consensus        43 ~~~~~k~~lVtGg~~gIG~aia~~l~~~-G~~V~l~~r   79 (248)
                      .+++||+++|-|- |..|.++|+.|+++ |++|+.++.
T Consensus        28 ~~l~g~~v~IqGf-GnVG~~~a~~L~~~~G~kvv~vsD   64 (239)
T d1gtma1          28 DTLKGKTIAIQGY-GNAGYYLAKIMSEDFGMKVVAVSD   64 (239)
T ss_dssp             SCSTTCEEEEECC-SHHHHHHHHHHHHTTCCEEEEEEC
T ss_pred             CCcCCCEEEEECC-CHHHHHHHHHHHHhcCcceeeccc
Confidence            4699999999987 77999999999875 888776654

>d1cjca1 c.3.1.1 (A:107-331) Adrenodoxin reductase of mitochondrial p450 systems {Cow (Bos taurus) [TaxId: 9913]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: C-terminal domain of adrenodoxin reductase-like
domain: Adrenodoxin reductase of mitochondrial p450 systems
species: Cow (Bos taurus) [TaxId: 9913]

Probab=81.09  E-value=0.96  Score=34.09  Aligned_cols=28  Identities=18%  Similarity=0.234  Sum_probs=23.3

Q ss_pred             ccCCCCCEEEEcCCCChHHHHHHHHHHHc
Q 044010           42 SEDVSGKVVIITGASSGIGEHLAYEYARR   70 (248)
Q Consensus        42 ~~~~~~k~~lVtGg~~gIG~aia~~l~~~   70 (248)
                      ..++++|+++|.|+ |-.+.-+|+-+++.
T Consensus        34 ~~~~~gk~VvVIGg-GNVAlD~aR~l~r~   61 (225)
T d1cjca1          34 APDLSCDTAVILGQ-GNVALDVARILLTP   61 (225)
T ss_dssp             CCCTTSSEEEEESC-SHHHHHHHHHHHSC
T ss_pred             CccccCceEEEECC-chhHHHHHHHHhcC
Confidence            34788999999977 78999999988874

>d1wg8a2 c.66.1.23 (A:5-108,A:207-284) TM0872, methyltransferase domain {Thermus thermophilus [TaxId: 274]}

class: Alpha and beta proteins (a/b)
fold: S-adenosyl-L-methionine-dependent methyltransferases
superfamily: S-adenosyl-L-methionine-dependent methyltransferases
family: MraW-like putative methyltransferases
domain: TM0872, methyltransferase domain
species: Thermus thermophilus [TaxId: 274]

Probab=80.92  E-value=2.6  Score=30.57  Aligned_cols=73  Identities=15%  Similarity=0.249  Sum_probs=47.8

Q ss_pred             EcCCCChHHHHHHHHHHHcCCeEEEEeCCcchHHHHHHHHHhhCCCcEEEEEccCCCHHHHHHHHHHHHhHcCCccEEEE
Q 044010           52 ITGASSGIGEHLAYEYARRGACLALCARREKSLEEVADTAREIGSPDVITIRADVSKVDDCRSLVEETMNHFGRLDHLVN  131 (248)
Q Consensus        52 VtGg~~gIG~aia~~l~~~G~~V~l~~r~~~~~~~~~~~l~~~~~~~v~~~~~D~~~~~~~~~~~~~~~~~~g~id~vv~  131 (248)
                      .|-|+||-    ++.+++++.+|+.++|+++..+.+.    .....++.+++.++++.+.   .+...  ..+.+|.++.
T Consensus        25 ~T~G~GGh----s~~iL~~~~~viaiD~D~~ai~~a~----~~~~~~~~~~~~~f~~~~~---~l~~~--~~~~vdgIl~   91 (182)
T d1wg8a2          25 ATLGGAGH----ARGILERGGRVIGLDQDPEAVARAK----GLHLPGLTVVQGNFRHLKR---HLAAL--GVERVDGILA   91 (182)
T ss_dssp             TTCTTSHH----HHHHHHTTCEEEEEESCHHHHHHHH----HTCCTTEEEEESCGGGHHH---HHHHT--TCSCEEEEEE
T ss_pred             eCCCCcHH----HHHHhcccCcEEEEhhhhhHHHHHh----hccccceeEeehHHHHHHH---HHHHc--CCCccCEEEE
Confidence            45555553    3445566779999999987654443    2344578899988877443   33322  2358999999


Q ss_pred             ccccCC
Q 044010          132 NAGISS  137 (248)
Q Consensus       132 ~ag~~~  137 (248)
                      .-|+.+
T Consensus        92 DLGvSs   97 (182)
T d1wg8a2          92 DLGVSS   97 (182)
T ss_dssp             ECSCCH
T ss_pred             EccCCH
Confidence            998764

>d1ccwa_ c.23.6.1 (A:) Glutamate mutase, small subunit {Clostridium cochlearium [TaxId: 1494]}

class: Alpha and beta proteins (a/b)
fold: Flavodoxin-like
superfamily: Cobalamin (vitamin B12)-binding domain
family: Cobalamin (vitamin B12)-binding domain
domain: Glutamate mutase, small subunit
species: Clostridium cochlearium [TaxId: 1494]

Probab=80.88  E-value=6.5  Score=26.88  Aligned_cols=86  Identities=14%  Similarity=0.094  Sum_probs=54.7

Q ss_pred             CCCCEEEEcCCC---ChHHHHHHHHHHH-cCCeEEEEeCCcchHHHHHHHHHhhCCCcEEEEE-ccCCCHHHHHHHHHHH
Q 044010           45 VSGKVVIITGAS---SGIGEHLAYEYAR-RGACLALCARREKSLEEVADTAREIGSPDVITIR-ADVSKVDDCRSLVEET  119 (248)
Q Consensus        45 ~~~k~~lVtGg~---~gIG~aia~~l~~-~G~~V~l~~r~~~~~~~~~~~l~~~~~~~v~~~~-~D~~~~~~~~~~~~~~  119 (248)
                      +++++++++-..   =.+|..++..+++ .|++|+-.+.+.+ .++..+...+... ++..+. .-..+...+.++.+.+
T Consensus         1 ~~k~kVvi~~~~gD~H~lG~~mva~~l~~~G~~V~~LG~~~p-~e~iv~a~~~~~~-d~v~lS~~~~~~~~~~~~~~~~l   78 (137)
T d1ccwa_           1 MEKKTIVLGVIGSDCHAVGNKILDHAFTNAGFNVVNIGVLSP-QELFIKAAIETKA-DAILVSSLYGQGEIDCKGLRQKC   78 (137)
T ss_dssp             CCCCEEEEEEETTCCCCHHHHHHHHHHHHTTCEEEEEEEEEC-HHHHHHHHHHHTC-SEEEEEECSSTHHHHHTTHHHHH
T ss_pred             CCCCEEEEEecCCChhHHHHHHHHHHHHHCCCeEEecccccC-HHHHHHHHHhcCC-CEEEEeeccccchHHHHHHHHHH
Confidence            456777774332   3699887777764 6999998877543 3566666666554 566554 4445567788888888


Q ss_pred             HhHc-CCccEEEEc
Q 044010          120 MNHF-GRLDHLVNN  132 (248)
Q Consensus       120 ~~~~-g~id~vv~~  132 (248)
                      ++.. .++-+++-.
T Consensus        79 ~~~~~~~i~iivGG   92 (137)
T d1ccwa_          79 DEAGLEGILLYVGG   92 (137)
T ss_dssp             HHTTCTTCEEEEEE
T ss_pred             HHhccCCCEEEEeC
Confidence            7653 234444333

>d1a9xa4 c.30.1.1 (A:556-676) Carbamoyl phosphate synthetase (CPS), large subunit PreATP-grasp domains {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: PreATP-grasp domain
superfamily: PreATP-grasp domain
family: BC N-terminal domain-like
domain: Carbamoyl phosphate synthetase (CPS), large subunit PreATP-grasp domains
species: Escherichia coli [TaxId: 562]

Probab=80.67  E-value=0.99  Score=30.71  Aligned_cols=78  Identities=8%  Similarity=0.082  Sum_probs=49.1

Q ss_pred             CCCEEEEcCCCC-h---------HHHHHHHHHHHcCCeEEEEeCCcchHHHHHHHHHhhCCCcEEEEEccCCCHHHHHHH
Q 044010           46 SGKVVIITGASS-G---------IGEHLAYEYARRGACLALCARREKSLEEVADTAREIGSPDVITIRADVSKVDDCRSL  115 (248)
Q Consensus        46 ~~k~~lVtGg~~-g---------IG~aia~~l~~~G~~V~l~~r~~~~~~~~~~~l~~~~~~~v~~~~~D~~~~~~~~~~  115 (248)
                      ..|.+||.|++. -         -+.+.++.|-++|++++++..|++....       .++ ...-+-.+.-..+.+.+.
T Consensus         3 ~~kkvlViGsGp~rIGq~~EfDy~~~~a~~aLk~~g~~~IliN~NPeTVst-------d~d-~aD~lYfeplt~e~v~~I   74 (121)
T d1a9xa4           3 DREKIMVLGGGPNRIGQGIEFDYCCVHASLALREDGYETIMVNCNPETVST-------DYD-TSDRLYFEPVTLEDVLEI   74 (121)
T ss_dssp             SSCEEEEECCCSCBTTBCHHHHHHHHHHHHHHHHTTCEEEEECCCTTSSTT-------STT-SSSEEECCCCSHHHHHHH
T ss_pred             CCCEEEEECCCcCcccccchhhHHHHHHHHHHHhcCCeEEEEecChhhhhc-------Chh-hcCceEEccCCHHHHHHH
Confidence            357899999863 2         3467888999999999999998863221       111 111122233345666666


Q ss_pred             HHHHHhHcCCccEEEEccccC
Q 044010          116 VEETMNHFGRLDHLVNNAGIS  136 (248)
Q Consensus       116 ~~~~~~~~g~id~vv~~ag~~  136 (248)
                      ++.   +  ++|.++-..|..
T Consensus        75 i~~---E--~p~~ii~~~GGQ   90 (121)
T d1a9xa4          75 VRI---E--KPKGVIVQYGGQ   90 (121)
T ss_dssp             HHH---H--CCSEEECSSSTH
T ss_pred             HHH---h--CCCEEEeehhhh
Confidence            653   2  789988777643

>d2o57a1 c.66.1.18 (A:16-297) Putative sarcosine dimethylglycine methyltransferase {Red algae (Galdieria sulphuraria) [TaxId: 130081]}

class: Alpha and beta proteins (a/b)
fold: S-adenosyl-L-methionine-dependent methyltransferases
superfamily: S-adenosyl-L-methionine-dependent methyltransferases
family: Mycolic acid cyclopropane synthase
domain: Putative sarcosine dimethylglycine methyltransferase
species: Red algae (Galdieria sulphuraria) [TaxId: 130081]

Probab=80.66  E-value=3.2  Score=31.85  Aligned_cols=76  Identities=12%  Similarity=0.108  Sum_probs=52.8

Q ss_pred             CCCEEEEcCCCChHHHHHHHHHHHc-CCeEEEEeCCcchHHHHHHHHHhhCC-CcEEEEEccCCCHHHHHHHHHHHHhHc
Q 044010           46 SGKVVIITGASSGIGEHLAYEYARR-GACLALCARREKSLEEVADTAREIGS-PDVITIRADVSKVDDCRSLVEETMNHF  123 (248)
Q Consensus        46 ~~k~~lVtGg~~gIG~aia~~l~~~-G~~V~l~~r~~~~~~~~~~~l~~~~~-~~v~~~~~D~~~~~~~~~~~~~~~~~~  123 (248)
                      +|.++|=.|++.|.   .+..|+++ |++|+.++-++...+.+.+..+..+- .++.++.+|..+.. .         .-
T Consensus        67 ~~~~vLDiGcG~G~---~~~~la~~~~~~v~gvD~s~~~i~~a~~~~~~~gl~~~v~~~~~d~~~l~-~---------~~  133 (282)
T d2o57a1          67 RQAKGLDLGAGYGG---AARFLVRKFGVSIDCLNIAPVQNKRNEEYNNQAGLADNITVKYGSFLEIP-C---------ED  133 (282)
T ss_dssp             TTCEEEEETCTTSH---HHHHHHHHHCCEEEEEESCHHHHHHHHHHHHHHTCTTTEEEEECCTTSCS-S---------CT
T ss_pred             CCCEEEEeCCCCcH---HHhhhhccCCcEEEEEeccchhhhhhhccccccccccccccccccccccc-c---------cc
Confidence            57899989887552   34445554 88999999988877777776666553 47899999987642 0         12


Q ss_pred             CCccEEEEccc
Q 044010          124 GRLDHLVNNAG  134 (248)
Q Consensus       124 g~id~vv~~ag  134 (248)
                      +.+|+|+..-.
T Consensus       134 ~sfD~V~~~~~  144 (282)
T d2o57a1         134 NSYDFIWSQDA  144 (282)
T ss_dssp             TCEEEEEEESC
T ss_pred             cccchhhccch
Confidence            47888876543

>d2o07a1 c.66.1.17 (A:16-300) Spermidine synthase {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: S-adenosyl-L-methionine-dependent methyltransferases
superfamily: S-adenosyl-L-methionine-dependent methyltransferases
family: Spermidine synthase
domain: Spermidine synthase
species: Human (Homo sapiens) [TaxId: 9606]

Probab=80.06  E-value=2.6  Score=32.92  Aligned_cols=77  Identities=13%  Similarity=0.181  Sum_probs=49.8

Q ss_pred             CCCCEEEEcCCCChHHHHHHHHHHHc-C-CeEEEEeCCcchHHHHHHHHHh----hCCCcEEEEEccCCCHHHHHHHHHH
Q 044010           45 VSGKVVIITGASSGIGEHLAYEYARR-G-ACLALCARREKSLEEVADTARE----IGSPDVITIRADVSKVDDCRSLVEE  118 (248)
Q Consensus        45 ~~~k~~lVtGg~~gIG~aia~~l~~~-G-~~V~l~~r~~~~~~~~~~~l~~----~~~~~v~~~~~D~~~~~~~~~~~~~  118 (248)
                      ..-|.+||.||++|   .+++.+++. + .+|.++.-+++..+-+.+.+..    ..+.++.++..|...         .
T Consensus        77 ~~pk~vLiiGgG~G---~~~~~~l~~~~~~~v~~vEiD~~Vv~~a~~~~~~~~~~~~d~rv~i~~~Da~~---------~  144 (285)
T d2o07a1          77 PNPRKVLIIGGGDG---GVLREVVKHPSVESVVQCEIDEDVIQVSKKFLPGMAIGYSSSKLTLHVGDGFE---------F  144 (285)
T ss_dssp             SSCCEEEEEECTTS---HHHHHHTTCTTCCEEEEEESCHHHHHHHHHHCHHHHGGGGCTTEEEEESCHHH---------H
T ss_pred             cCcCeEEEeCCCch---HHHHHHHHcCCcceeeeccCCHHHHHHHHhhchhhccccCCCCceEEEccHHH---------H
Confidence            34578999998876   345556665 3 3889998888766665554432    224588888887432         2


Q ss_pred             HHhHcCCccEEEEcc
Q 044010          119 TMNHFGRLDHLVNNA  133 (248)
Q Consensus       119 ~~~~~g~id~vv~~a  133 (248)
                      +.+.-.+.|++|.-+
T Consensus       145 l~~~~~~yDvIi~D~  159 (285)
T d2o07a1         145 MKQNQDAFDVIITDS  159 (285)
T ss_dssp             HHTCSSCEEEEEEEC
T ss_pred             HhcCCCCCCEEEEcC
Confidence            223335799999875