BLAST Results

Query Summary

Your job contains 1 sequence.

Parameters
Threshold: 0.001
Maximum number of alignments shown: 100
BLAST filter: on

Query Sequence

>044011
GALGATKLLRPFSDIIDSLELKDPFVRNWIDLLAFLLAGVKSNGILSAEMVYMFAEWYKP
GCSLEYPLRGSGALVNALVRGIEKFGGRLSLRSRGKDSS

High Scoring Gene Products

Symbol, full name Information P value
AT1G57770 protein from Arabidopsis thaliana 7.5e-41
Os03g0841900
FAD dependent oxidoreductase family protein, expressed
protein from Oryza sativa Japonica Group 8.7e-40
CHLREDRAFT_130438
Predicted protein
protein from Chlamydomonas reinhardtii 6.5e-24
CHLREDRAFT_176572
Predicted protein
protein from Chlamydomonas reinhardtii 1.3e-12

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Raw Blast Data

BLASTP 2.0MP-WashU [04-May-2006] [linux26-i686-ILP32F64 2006-05-09T11:47:08]

Copyright (C) 1996-2006 Washington University, Saint Louis, Missouri USA.
All Rights Reserved.

Reference:  Gish, W. (1996-2006) http://blast.wustl.edu

Query=  044011
        (99 letters)

Database:  go_20130330-seqdb.fasta
           368,745 sequences; 169,044,731 total letters.
Searching....10....20....30....40....50....60....70....80....90....100% done

                                                                     Smallest
                                                                       Sum
                                                              High  Probability
Sequences producing High-scoring Segment Pairs:              Score  P(N)      N

TAIR|locus:2009395 - symbol:AT1G57770 species:3702 "Arabi...   434  7.5e-41   1
UNIPROTKB|Q10AT7 - symbol:Os03g0841900 "Os03g0841900 prot...   424  8.7e-40   1
UNIPROTKB|A8J3K3 - symbol:CHLREDRAFT_130438 "Predicted pr...   281  6.5e-24   1
UNIPROTKB|A8J7T2 - symbol:CHLREDRAFT_176572 "Predicted pr...   177  1.3e-12   1


>TAIR|locus:2009395 [details] [associations]
            symbol:AT1G57770 species:3702 "Arabidopsis thaliana"
            [GO:0005739 "mitochondrion" evidence=ISM] [GO:0016117 "carotenoid
            biosynthetic process" evidence=IBA] [GO:0016491 "oxidoreductase
            activity" evidence=IEA;ISS] [GO:0046608 "carotenoid isomerase
            activity" evidence=IBA] [GO:0055114 "oxidation-reduction process"
            evidence=IEA] [GO:0009507 "chloroplast" evidence=IDA]
            InterPro:IPR014101 EMBL:CP002684 GO:GO:0009507 GO:GO:0016117
            eggNOG:COG1233 GO:GO:0046608 PANTHER:PTHR10668:SF30 EMBL:AC079732
            OMA:PQCESFM ProtClustDB:CLSN2690470 EMBL:AY065278 EMBL:AY133831
            IPI:IPI00524521 PIR:A96612 RefSeq:NP_176088.2 UniGene:At.28533
            ProteinModelPortal:Q9FVR9 SMR:Q9FVR9 STRING:Q9FVR9 PaxDb:Q9FVR9
            PRIDE:Q9FVR9 EnsemblPlants:AT1G57770.1 GeneID:842152
            KEGG:ath:AT1G57770 TAIR:At1g57770 InParanoid:Q9FVR9
            PhylomeDB:Q9FVR9 ArrayExpress:Q9FVR9 Genevestigator:Q9FVR9
            Uniprot:Q9FVR9
        Length = 574

 Score = 434 (157.8 bits), Expect = 7.5e-41, P = 7.5e-41
 Identities = 80/93 (86%), Positives = 91/93 (97%)

Query:     1 GALGATKLLRPFSDIIDSLELKDPFVRNWIDLLAFLLAGVKSNGILSAEMVYMFAEWYKP 60
             GALGATKLLRPFS+I+DSLELKDPF+RNWIDLLAFLLAGVKS+GILSAEM+YMFAEWYKP
Sbjct:   225 GALGATKLLRPFSEIVDSLELKDPFIRNWIDLLAFLLAGVKSDGILSAEMIYMFAEWYKP 284

Query:    61 GCSLEYPLRGSGALVNALVRGIEKFGGRLSLRS 93
             GC+LEYP+ G+GA+V ALVRG+EKFGGRLSL+S
Sbjct:   285 GCTLEYPIDGTGAVVEALVRGLEKFGGRLSLKS 317


>UNIPROTKB|Q10AT7 [details] [associations]
            symbol:Os03g0841900 "Os03g0841900 protein" species:39947
            "Oryza sativa Japonica Group" [GO:0009507 "chloroplast"
            evidence=ISS] [GO:0016117 "carotenoid biosynthetic process"
            evidence=ISS] [GO:0046608 "carotenoid isomerase activity"
            evidence=ISS] InterPro:IPR014101 GO:GO:0009507 EMBL:DP000009
            EMBL:AP008209 GO:GO:0016117 EMBL:CM000140 eggNOG:COG1233
            GO:GO:0046608 PANTHER:PTHR10668:SF30 RefSeq:NP_001051855.1
            UniGene:Os.22483 STRING:Q10AT7 EnsemblPlants:LOC_Os03g62510.1
            GeneID:4334739 KEGG:osa:4334739 OMA:PQCESFM ProtClustDB:CLSN2690470
            Uniprot:Q10AT7
        Length = 597

 Score = 424 (154.3 bits), Expect = 8.7e-40, P = 8.7e-40
 Identities = 80/93 (86%), Positives = 89/93 (95%)

Query:     1 GALGATKLLRPFSDIIDSLELKDPFVRNWIDLLAFLLAGVKSNGILSAEMVYMFAEWYKP 60
             GALGATKLLRPFS+I+DSL LK+PFVRNWIDLL FLLAGVKS+G LSAEMVYMFAEWYKP
Sbjct:   248 GALGATKLLRPFSEIVDSLGLKNPFVRNWIDLLCFLLAGVKSDGALSAEMVYMFAEWYKP 307

Query:    61 GCSLEYPLRGSGALVNALVRGIEKFGGRLSLRS 93
             GCSLEYPL GSGA+++ALVRGI+KFGGRL+LRS
Sbjct:   308 GCSLEYPLEGSGAIIDALVRGIKKFGGRLALRS 340


>UNIPROTKB|A8J3K3 [details] [associations]
            symbol:CHLREDRAFT_130438 "Predicted protein" species:3055
            "Chlamydomonas reinhardtii" [GO:0009507 "chloroplast" evidence=ISS]
            [GO:0016117 "carotenoid biosynthetic process" evidence=ISS]
            [GO:0046608 "carotenoid isomerase activity" evidence=ISS]
            InterPro:IPR014101 GO:GO:0009507 GO:GO:0016117 eggNOG:COG1233
            GO:GO:0046608 PANTHER:PTHR10668:SF30 EMBL:DS496135
            RefSeq:XP_001695939.1 UniGene:Cre.3256 ProteinModelPortal:A8J3K3
            ProMEX:A8J3K3 EnsemblPlants:EDP01276 GeneID:5721453
            KEGG:cre:CHLREDRAFT_130438 OMA:ANEPWER ProtClustDB:CLSN2922292
            Uniprot:A8J3K3
        Length = 558

 Score = 281 (104.0 bits), Expect = 6.5e-24, P = 6.5e-24
 Identities = 48/89 (53%), Positives = 69/89 (77%)

Query:     5 ATKLLRPFSDIIDSLELKDPFVRNWIDLLAFLLAGVKSNGILSAEMVYMFAEWYKPGCSL 64
             A KL  PF+ ++D   ++DPF+RNW+DLL+FLL+G+ +NG ++AE+ +MF EWY+P C L
Sbjct:   214 AAKLSGPFAGVLDGANIRDPFIRNWLDLLSFLLSGLPANGTVAAEVAFMFNEWYRPDCFL 273

Query:    65 EYPLRGSGALVNALVRGIEKFGGRLSLRS 93
             E+P+ GS A+V  LV G+EK+GGRL L S
Sbjct:   274 EFPVGGSQAMVQGLVGGMEKYGGRLMLSS 302


>UNIPROTKB|A8J7T2 [details] [associations]
            symbol:CHLREDRAFT_176572 "Predicted protein" species:3055
            "Chlamydomonas reinhardtii" [GO:0009507 "chloroplast" evidence=ISS]
            [GO:0016117 "carotenoid biosynthetic process" evidence=ISS]
            [GO:0046608 "carotenoid isomerase activity" evidence=ISS]
            InterPro:IPR014101 GO:GO:0009507 GO:GO:0016117 eggNOG:COG1233
            GO:GO:0046608 PANTHER:PTHR10668:SF30 EMBL:DS496142
            RefSeq:XP_001697619.1 ProteinModelPortal:A8J7T2 GeneID:5723233
            KEGG:cre:CHLREDRAFT_176572 ProtClustDB:CLSN2922724 Uniprot:A8J7T2
        Length = 566

 Score = 177 (67.4 bits), Expect = 1.3e-12, P = 1.3e-12
 Identities = 38/89 (42%), Positives = 59/89 (66%)

Query:     5 ATKLLRPFSDIIDSLELKDPFVRNWIDLLAFLLAGVKSNGILSAEMVYMFAEWYKPGCSL 64
             A  L  PFS ++D   +  P++R ++DL  F+L+G+ +   L AEM +MFAE      ++
Sbjct:   254 APLLTGPFSALVDK-HVTHPWLRAFLDLECFVLSGMTARDTLCAEMAFMFAERNAGRTAI 312

Query:    65 EYPLRGSGALVNALVRGIEKFGGRLSLRS 93
             +YP+ GS A+++ALVRGI K GGR+ LR+
Sbjct:   313 DYPMGGSEAIIDALVRGITKNGGRVLLRT 341


Parameters:
  V=100
  filter=SEG
  E=0.001

  ctxfactor=1.00

  Query                        -----  As Used  -----    -----  Computed  ----
  Frame  MatID Matrix name     Lambda    K       H      Lambda    K       H
   +0      0   BLOSUM62        0.322   0.141   0.422    same    same    same
               Q=9,R=2         0.244   0.0300  0.180     n/a     n/a     n/a

  Query
  Frame  MatID  Length  Eff.Length     E     S W   T  X   E2     S2
   +0      0       99        99   0.00091  102 3  11 22  0.38    30
                                                     29  0.46    31


Statistics:

  Database:  /share/blast/go-seqdb.fasta
   Title:  go_20130330-seqdb.fasta
   Posted:  5:47:42 AM PDT Apr 1, 2013
   Created:  5:47:42 AM PDT Apr 1, 2013
   Format:  XDF-1
   # of letters in database:  169,044,731
   # of sequences in database:  368,745
   # of database sequences satisfying E:  4
  No. of states in DFA:  543 (58 KB)
  Total size of DFA:  109 KB (2073 KB)
  Time to generate neighborhood:  0.00u 0.00s 0.00t   Elapsed:  00:00:00
  No. of threads or processors used:  24
  Search cpu time:  8.68u 0.12s 8.80t   Elapsed:  00:00:00
  Total cpu time:  8.68u 0.12s 8.80t   Elapsed:  00:00:00
  Start:  Sat May 11 04:24:11 2013   End:  Sat May 11 04:24:11 2013

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