Citrus Sinensis ID: 044013

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Local Sequence Feature Prediction

Residue Number Marker
--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120-------130-------140-------150---
Protein Sequence
MESNPNEDYSKSSSDDETDAGTGRSYECVFCKRGFTTAQALGGHMNIHRKDRAKNRPPSSSSISDKLTFFPSPSTWDDHQRSVHTNNNNHSNYDSYGQNYHQHLNMIGDEIWRGNRSLRVGPSHLHADHDKEKREGASEEDELDLELRLGHDP
Secondary Structure (PSIPRED)
ccccccccccccccccccccccccEEEccccccccccccccHHHHHHHHHHHHcccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccc
Secondary Structure Prediction (SSPRO)
cccccccccHHcccccccccccccEEEEEEccccccHHHHHcccHHHHHHHHHHHHccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccEEEEccccc
Coil and Loop (DISEMBL)
mesnpnedysksssddetdagtgrsyecvfckrgfttaqalgghmnihrkdraknrppssssisdkltffpspstwddhqrsvhtnnnnhsnydsygqNYHQHLNMIGDEiwrgnrslrvgpshlhadhdkekregaseedELDLELRLGHDP
Flexible Loop (DISEMBL)
mesnpnedysksssddetdagtGRSYECVFCKRGFTTAQAlgghmnihrkdraknrppssssisdkLTFFPSPSTWDDHQRSVHTNNNNHSNYDSYGQNYHQHLNMIGDEIWRGNRSLRVGPShlhadhdkekregaseedeldlelrlghdp
Low Complexity Region (SEG)
MESNPNEDYSKSSSDDETDAGTGRSYECVFCKRGFTTAQALGGHMNIHRKDRAKNRPPSSSSISDKLTFFPSPSTWDDHQRSVHTNNNNHSNYDSYGQNYHQHLNMIGDEIWRGNRSLRVGPSHLHADHDKEKREGASeedeldlelrlGHDP
Disordered region (IsUnstruct)
************************SYECVFCKRGFTTAQALGGHM**************************************************YGQNYHQHLNMIGDEIWRGN**************************************
Disordered Region (DISOPRED)
***************************CVFCKRGFTTAQALGG*******************************************************************************************************LRLGH**
Disordered Region (DISEMBL)
**********************GRSYECVFCKRGFTTAQALGGHMNIHR**************SDKLTFFPSPSTWDDHQRSVHTNNNNHSNYDSYGQNYHQHLNMIGDEIWRGNRSLRVGPSHL****************************
Disordered Region (DISPRO)
**********************GRSYECVFCKRGFTTAQALGGHMNIHRKDRAKNRP************************************************************************************ELDLELRLGH**
Transmembrane Helix (TMHMM)
ooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
Transmembrane Helix (HMMTOP)
ooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
Transmembrane Helix (MEMSAT)
iiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiihhhhhhhhhhhhhhhhhhhhoooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
TM Helix, Signal Peptide (MEMSAT_SVM)
ooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooohhhhhhhhhhhhhhhhiiii
TM Helix, Signal Peptide (Phobius)
ooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
Signal Peptide (SignalP HMM Mode)
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Signal Peptide (SignalP NN Mode)
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Coiled Coils (COILS)
MESNPNEDYSKSSSDDETDAGTGRSYECVFCKRGFTTAQALGGHMNIHRKDRAKNRPPSSSSISDKLTFFPSPSTWDDHQRSVHTNNNNHSNYDSYGQNYHQHLNMIGDEIWRGNRSLRVGPSHLHADHDKEKREGASEEDELDLELRLGHDP
Positional Conservation
no confident homologs detected

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Close Homologs for Annotation Transfer

Close Homologs in SWISS-PROT Database Detected by BLAST

Original result of BLAST against SWISS-PROT Database

ID	Length	Definition	RBH(Q2H)	RBH(H2Q)	Q cover	H cover	Identity	E-value
Query	153	2.2.26 [Sep-21-2011]
Q9SR34	172	Transcriptional regulator	no	no	0.215	0.191	0.787	7e-10
Q38895	204	Transcriptional regulator	no	no	0.215	0.161	0.727	1e-08
Q9LHS9	226	Probable transcriptional	no	no	0.444	0.300	0.421	9e-08
Q6S592	207	Zinc finger protein JAGGE	no	no	0.450	0.333	0.361	5e-05
Q6S591	253	Zinc finger protein JAGGE	no	no	0.202	0.122	0.580	6e-05
Q39265	197	Zinc finger protein 6 OS=	no	no	0.261	0.203	0.488	9e-05
Q9LG97	263	Zinc finger protein STAME	no	no	0.202	0.117	0.580	9e-05
Q9FFX4	161	Zinc finger protein KNUCK	no	no	0.215	0.204	0.515	0.0001
Q39262	235	Zinc finger protein 3 OS=	no	no	0.620	0.404	0.266	0.0002

>sp|Q9SR34|TAC1_ARATH Transcriptional regulator TAC1 OS=Arabidopsis thaliana GN=TAC1 PE=2 SV=1

 Score = 62.8 bits (151), Expect = 7e-10,   Method: Compositional matrix adjust.
 Identities = 26/33 (78%), Positives = 28/33 (84%)

Query: 24 RSYECVFCKRGFTTAQALGGHMNIHRKDRAKNR 56
          RSY C FC RGF+ AQALGGHMNIHR+DRAK R
Sbjct: 33 RSYVCSFCIRGFSNAQALGGHMNIHRRDRAKLR 65

Activation factor which mediates telomerase activity and potentiates responses to auxin through the regulation of BT2. Binds in vitro to the DNA sequence 5'-GACAGTGTTAC-3' of the BT2 promoter.
Arabidopsis thaliana (taxid: 3702)

>sp|Q38895|SUP_ARATH Transcriptional regulator SUPERMAN OS=Arabidopsis thaliana GN=SUP PE=1 SV=1

 Score = 58.9 bits (141), Expect = 1e-08,   Method: Compositional matrix adjust.
 Identities = 24/33 (72%), Positives = 28/33 (84%)

Query: 24 RSYECVFCKRGFTTAQALGGHMNIHRKDRAKNR 56
          RSY C FCKR F +AQALGGHMN+HR+DRA+ R
Sbjct: 45 RSYTCSFCKREFRSAQALGGHMNVHRRDRARLR 77

Probable transcriptional regulator considered as cadastral protein that acts indirectly to prevent the B class homeotic proteins APETALA3 and perhaps PISTILLATA from acting in the gynoecial whorl. Principal function is to balance cell proliferation in the third and fourth whorls of developing flowers thereby maintaining the boundary between stamens and carpels. May fulfill this role by repressing genes implicated in cell division. Plays equally a role in the determinacy of the floral meristem. Is also required for normal ovule development.

Arabidopsis thaliana (taxid: 3702)

>sp|Q9LHS9|RBE_ARATH Probable transcriptional regulator RABBIT EARS OS=Arabidopsis thaliana GN=RBE PE=2 SV=2

 Score = 55.8 bits (133), Expect = 9e-08,   Method: Compositional matrix adjust.
 Identities = 32/76 (42%), Positives = 43/76 (56%), Gaps = 8/76 (10%)

Query: 13  SSDDETDAGTG-----RSYECVFCKRGFTTAQALGGHMNIHRKDRAKNRPPSSSSISDKL 67
           +S +E   G G     RSY C FC R F +AQALGGHMN+HR+DRA+ +     S+S   
Sbjct: 37  ASAEEYGGGGGCMWPPRSYSCSFCGREFKSAQALGGHMNVHRRDRARLK---QQSLSPSS 93

Query: 68  TFFPSPSTWDDHQRSV 83
           T   +P   D  Q+ +
Sbjct: 94  TDQATPPECDRQQQVL 109

Probable transcriptional regulator essential for petal development. Required for the early development of the organ primordia of the second whorl. Acts downstream of AP1 and PTL.

Arabidopsis thaliana (taxid: 3702)

>sp|Q6S592|JGL_ARATH Zinc finger protein JAGGED-like OS=Arabidopsis thaliana GN=JGL PE=2 SV=1

 Score = 47.0 bits (110), Expect = 5e-05,   Method: Compositional matrix adjust.
 Identities = 26/72 (36%), Positives = 35/72 (48%), Gaps = 3/72 (4%)

Query: 17  ETDAGTGRSYECVFCKRGFTTAQALGGHMNIHRKDRAKNRPPSSSSISDKLTFFPS---P 73
           E     G+ YEC FC   F  +QALGGHMN HR++R       +  +  +   FP    P
Sbjct: 41  EKQTKDGKEYECRFCSLKFFKSQALGGHMNRHRQERETESLNKARELVLRNDSFPPHQGP 100

Query: 74  STWDDHQRSVHT 85
            ++  HQ  VH 
Sbjct: 101 PSFSYHQGDVHI 112

Acts with JAG to promote growth and patterning in stamens and carpels. Promotes the growth of the abaxial and adaxial sides of floral organs. Promotes the growth of the pollen-bearing microsporangia in anthers, the carpel walls of the gynoecium and the establishment of the correct number of cell layers in carpel walls. Promotes leaf blade growth and trichome development.

Arabidopsis thaliana (taxid: 3702)

>sp|Q6S591|JAG_ARATH Zinc finger protein JAGGED OS=Arabidopsis thaliana GN=JAG PE=2 SV=1

 Score = 46.6 bits (109), Expect = 6e-05,   Method: Compositional matrix adjust.
 Identities = 18/31 (58%), Positives = 23/31 (74%)

Query: 22 TGRSYECVFCKRGFTTAQALGGHMNIHRKDR 52
          +G+ YEC FC   F  +QALGGHMN HR++R
Sbjct: 47 SGKVYECRFCSLKFCKSQALGGHMNRHRQER 77

Controls the morphogenesis of lateral organs. Functions in lateral organ shape and is sufficient to induce proliferation and growth of lateral organ tissue. Is necessary and sufficient for bract formation, but its expression is excluded from the cryptic bract, which could be a cause of bractless flowers in Arabidopsis. Participates with FIL and YAB3 in regulating valve margin development. Functions with JGL to define stamen and carpel shape. Functions with AS1 and AS2 in the sepal and petal primordia to repress boundary-specifying genes for normal development of the organs.

Arabidopsis thaliana (taxid: 3702)

>sp|Q39265|ZFP6_ARATH Zinc finger protein 6 OS=Arabidopsis thaliana GN=ZFP6 PE=2 SV=1

 Score = 45.8 bits (107), Expect = 9e-05,   Method: Compositional matrix adjust.
 Identities = 21/43 (48%), Positives = 28/43 (65%), Gaps = 3/43 (6%)

Query: 13 SSDDETDAGTG---RSYECVFCKRGFTTAQALGGHMNIHRKDR 52
          SS+    +G+G   R YEC +C R F  +QALGGH N H+K+R
Sbjct: 25 SSEPRPGSGSGSESRKYECQYCCREFANSQALGGHQNAHKKER 67

Arabidopsis thaliana (taxid: 3702)

>sp|Q9LG97|SL1_ORYSJ Zinc finger protein STAMENLESS 1 OS=Oryza sativa subsp. japonica GN=SL1 PE=2 SV=1

 Score = 45.8 bits (107), Expect = 9e-05,   Method: Compositional matrix adjust.
 Identities = 18/31 (58%), Positives = 22/31 (70%)

Query: 22 TGRSYECVFCKRGFTTAQALGGHMNIHRKDR 52
           G+ YEC FC   F  +QALGGHMN HR++R
Sbjct: 54 AGKVYECRFCSLKFCKSQALGGHMNRHRQER 84

Regulates floral organ identity and cell proliferation in the inner floral whorls. Probably specifies the identities of lodicule and stamen through positive regulation of MADS16 expression. May contribute to morphogenesis by suppressing OSH1 expression in the lateral organs.

Oryza sativa subsp. japonica (taxid: 39947)

>sp|Q9FFX4|KNU_ARATH Zinc finger protein KNUCKLES OS=Arabidopsis thaliana GN=KNU PE=1 SV=1

 Score = 45.4 bits (106), Expect = 1e-04,   Method: Compositional matrix adjust.
 Identities = 17/33 (51%), Positives = 23/33 (69%)

Query: 24 RSYECVFCKRGFTTAQALGGHMNIHRKDRAKNR 56
          R + C +C R F T+QALGGH N H+++RA  R
Sbjct: 36 RLFPCQYCPRKFYTSQALGGHQNAHKRERAAAR 68

May function as a transcriptional repressor of cellular proliferation that regulates floral determinacy and relative size of basal pattern elements along the proximo-distal axis of the developing gynoecium.

Arabidopsis thaliana (taxid: 3702)

>sp|Q39262|ZFP3_ARATH Zinc finger protein 3 OS=Arabidopsis thaliana GN=ZFP3 PE=2 SV=1

 Score = 45.1 bits (105), Expect = 2e-04,   Method: Compositional matrix adjust.
 Identities = 28/105 (26%), Positives = 55/105 (52%), Gaps = 10/105 (9%)

Query: 8   DYSKSSSDDETDAGTGRSYECVFCKRGFTTAQALGGHMNIHRKD-----RAKNRPPSSSS 62
           D + S  ++ T +   + + C +C+R F ++QALGGH N H+++     R +    S+S+
Sbjct: 43  DDTTSIVNESTTSTEQKLFSCNYCQRTFYSSQALGGHQNAHKRERTLAKRGQRMAASASA 102

Query: 63  ISDKLTFFPSP--STWDDHQR---SVHTNNNNHSNYDSYGQNYHQ 102
                 F P P    +++H+      H+ ++  S+Y+ +G +Y Q
Sbjct: 103 FGHPYGFSPLPFHGQYNNHRSLGIQAHSISHKLSSYNGFGGHYGQ 147

Arabidopsis thaliana (taxid: 3702)

Close Homologs in the Non-Redundant Database Detected by BLAST

Original result of BLAST against Nonredundant Database

GI	Length	Definition	Q cover	H cover	Identity	E-value
Query	153
224066277	184	predicted protein [Populus trichocarpa]	0.947	0.788	0.489	2e-32
255559999	188	nucleic acid binding protein, putative [	0.993	0.808	0.497	3e-29
224082768	185	predicted protein [Populus trichocarpa]	0.947	0.783	0.457	5e-25
315661277	180	transcriptional regulator superman [Malu	0.941	0.8	0.445	8e-23
359480004	175	PREDICTED: transcriptional regulator SUP	0.986	0.862	0.418	1e-22
315661279	206	transcriptional regulator superman [Malu	0.960	0.713	0.419	3e-22
357441051	191	Transcriptional regulator SUPERMAN [Medi	0.915	0.732	0.373	2e-17
388506292	191	unknown [Medicago truncatula]	0.941	0.753	0.405	3e-17
449462920	202	PREDICTED: uncharacterized protein LOC10	0.679	0.514	0.427	3e-16
225432987	178	PREDICTED: probable transcriptional regu	0.790	0.679	0.378	2e-15

>gi|224066277|ref|XP_002302060.1| predicted protein [Populus trichocarpa] gi|222843786|gb|EEE81333.1| predicted protein [Populus trichocarpa]

 Score =  143 bits (361), Expect = 2e-32,   Method: Compositional matrix adjust.
 Identities = 94/192 (48%), Positives = 112/192 (58%), Gaps = 47/192 (24%)

Query: 1   MESNPNEDYSKSSSDDE-------TDAGTGRSYECVFCKRGFTTAQALGGHMNIHRKDRA 53
           MESN +++ SKSSSD+E        D GTGRSYECVFCKRGFTTAQALGGHMNIHRKDRA
Sbjct: 1   MESNQHDEDSKSSSDEEEITDRSDQDTGTGRSYECVFCKRGFTTAQALGGHMNIHRKDRA 60

Query: 54  KNRPPSSSSISDKL-------------------------------TFFPSPSTWDDHQRS 82
           K+RP S  S+S K+                               TFFP+ +TW      
Sbjct: 61  KSRPSSVPSLSSKVDEDYASFQGYPPIQSYPPHYPTPHEVHINYQTFFPASTTW-----G 115

Query: 83  VHTNNNNHSNYDSYGQNYHQHLNMIGDEIWRGNRSLRVGPSHLHADHDKEKRE-GASEED 141
           + +      N D Y Q+ H HL   GD+ WR + SL+ GPSH+  D+ KEK E G   +D
Sbjct: 116 IGSPYAQQHNGDFYVQSPH-HLYPFGDD-WRRSLSLQTGPSHV-DDNTKEKIEDGIGADD 172

Query: 142 ELDLELRLGHDP 153
           ELDLELRLGHDP
Sbjct: 173 ELDLELRLGHDP 184

Source: Populus trichocarpa

Species: Populus trichocarpa

Genus: Populus

Family: Salicaceae

Order: Malpighiales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|255559999|ref|XP_002521018.1| nucleic acid binding protein, putative [Ricinus communis] gi|223539855|gb|EEF41435.1| nucleic acid binding protein, putative [Ricinus communis]

 Score =  133 bits (334), Expect = 3e-29,   Method: Compositional matrix adjust.
 Identities = 94/189 (49%), Positives = 110/189 (58%), Gaps = 37/189 (19%)

Query: 1   MESNPN-EDYSKSSSDDETD---------AGTGRSYECVFCKRGFTTAQALGGHMNIHRK 50
           MESNP+ ED +KSSS++ETD          GTGRSYECVFCKRGFTTAQALGGHMNIHRK
Sbjct: 1   MESNPHLEDANKSSSEEETDRSEKANDHDMGTGRSYECVFCKRGFTTAQALGGHMNIHRK 60

Query: 51  DRAKNRPPSSSSISDKL---------------TFFPSPSTWDDHQRSVHTNNNNH----- 90
           DRAK    SSSSIS K+               +F P   +  +H   VHTN         
Sbjct: 61  DRAKPSLASSSSISSKVDEDYYASLRGYTPIQSFPPHYYSTANHHHEVHTNYQTFFPPSS 120

Query: 91  ------SNYDSYGQNYHQHLNMIGDEIWRGNRSLRVGPSHLHADHDKEKREGASEEDELD 144
                  N D       Q LN   D+ WR + SL++GPSH+  DH+K+K +  S  DELD
Sbjct: 121 GGSFRPPNGDGLYVQSPQILNPFEDD-WRRSLSLQIGPSHVDDDHNKQKEKDGSVADELD 179

Query: 145 LELRLGHDP 153
           LELRLGHDP
Sbjct: 180 LELRLGHDP 188

Source: Ricinus communis

Species: Ricinus communis

Genus: Ricinus

Family: Euphorbiaceae

Order: Malpighiales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|224082768|ref|XP_002306831.1| predicted protein [Populus trichocarpa] gi|222856280|gb|EEE93827.1| predicted protein [Populus trichocarpa]

 Score =  119 bits (298), Expect = 5e-25,   Method: Compositional matrix adjust.
 Identities = 86/188 (45%), Positives = 106/188 (56%), Gaps = 43/188 (22%)

Query: 3   SNPNEDYSKSSSDDET------DAGTGRSYECVFCKRGFTTAQALGGHMNIHRKDRAKNR 56
           SN +++ SKSSSD+E       D GTGRSYECVFCKRGFTTAQALGGHMNIHRKDRAK+R
Sbjct: 4   SNQHDEDSKSSSDEEITDRSYQDTGTGRSYECVFCKRGFTTAQALGGHMNIHRKDRAKSR 63

Query: 57  PPSSSSISDKL-------------------------------TFFPSPSTWDDHQRSVHT 85
           P S  S S K+                               TFFP  STW      + +
Sbjct: 64  PSSVPSFSSKVDEDFPSFRGYPPLQSYPAHYPTPHEVHTNYQTFFPLSSTW-----GIGS 118

Query: 86  NNNNHSNYDSYGQNYHQHLNMIGDEIWRGNRSLRVGPSHLHADHDKEKREGASEEDELDL 145
                 N D Y Q   QHL   G++I RG+ S ++ PSH+  +  ++  EG+  +D+LDL
Sbjct: 119 PYAQQHNGDFYAQT-PQHLYPFGEDICRGSLSQQIDPSHVDDNTKEKIEEGSEADDDLDL 177

Query: 146 ELRLGHDP 153
           ELRLGHDP
Sbjct: 178 ELRLGHDP 185

Source: Populus trichocarpa

Species: Populus trichocarpa

Genus: Populus

Family: Salicaceae

Order: Malpighiales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|315661277|gb|ADU55567.1| transcriptional regulator superman [Malus x domestica]

 Score =  111 bits (278), Expect = 8e-23,   Method: Compositional matrix adjust.
 Identities = 78/175 (44%), Positives = 98/175 (56%), Gaps = 31/175 (17%)

Query: 7   EDYSKSSSDDETD--------AGTGRSYECVFCKRGFTTAQALGGHMNIHRKDRAKNRPP 58
           +D   SS+D+E D         GTGRSYECVFCKRGFTTAQALGGHMNIHRK+RAK RP 
Sbjct: 9   QDSKTSSTDEEADHQPHANDDMGTGRSYECVFCKRGFTTAQALGGHMNIHRKERAKTRP- 67

Query: 59  SSSSISDKLTFFPSPSTWDDHQ------RSVHT---------NNNNHSNYDSYGQNY-HQ 102
             SSI   L    S +  D +       R++ +         + N+ S+ D   +NY  +
Sbjct: 68  --SSIPTSLASSISTAVEDQNHPRAALYRAIQSYRPGVLRPPHANHISDEDLCARNYIPR 125

Query: 103 HLNMIGDE--IWRGNRSLRVGPSHLHADHDKEKREGASEE--DELDLELRLGHDP 153
           H N++ D+   WR   SL +G      D+ +    G  EE  DELDLELRLGHDP
Sbjct: 126 HRNLLRDDHRDWRSGSSLSLGMGQPSDDYKERVINGGLEETDDELDLELRLGHDP 180

Source: Malus x domestica

Species: Malus x domestica

Genus: Malus

Family: Rosaceae

Order: Rosales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|359480004|ref|XP_003632388.1| PREDICTED: transcriptional regulator SUPERMAN-like [Vitis vinifera] gi|147794424|emb|CAN60537.1| hypothetical protein VITISV_010583 [Vitis vinifera]

 Score =  111 bits (277), Expect = 1e-22,   Method: Compositional matrix adjust.
 Identities = 74/177 (41%), Positives = 93/177 (52%), Gaps = 26/177 (14%)

Query: 1   MESNPNEDYSKSSSDDETDAG-------TGRSYECVFCKRGFTTAQALGGHMNIHRKDRA 53
           MES P E+   SS + E           TG SY+CVFCKRGFTTAQALGGHMNIHRKDRA
Sbjct: 1   MESGPREEARNSSEETERPEQEEDEEMITGPSYDCVFCKRGFTTAQALGGHMNIHRKDRA 60

Query: 54  KNRPPSS-----------------SSISDKLTFFPSPSTWDDHQRSVHTNNNNHSNYDSY 96
           K +PPSS                 S +S K     +P    ++Q  +  + +   +    
Sbjct: 61  KAKPPSSVLPKKPEENFVNSGFCVSILSYKPPNSTAPEAQINYQEYILASTSPARDPIDD 120

Query: 97  GQNYHQHLNMIGDEIWRGNRSLRVGPSHLHADHDKEKREGASEEDELDLELRLGHDP 153
            +   Q    +  E WR   SL+VGPS  +    KEK +   +EDELDLELRLGH+P
Sbjct: 121 FRAEKQETPNVCKEDWRTCLSLQVGPSCAY--DSKEKGQEEKQEDELDLELRLGHNP 175

Source: Vitis vinifera

Species: Vitis vinifera

Genus: Vitis

Family: Vitaceae

Order: Vitales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|315661279|gb|ADU55568.1| transcriptional regulator superman [Malus x domestica]

 Score =  109 bits (273), Expect = 3e-22,   Method: Compositional matrix adjust.
 Identities = 83/198 (41%), Positives = 104/198 (52%), Gaps = 51/198 (25%)

Query: 7   EDYSKSSSDDETD--------AGTGRSYECVFCKRGFTTAQALGGHMNIHRKDRAKNRPP 58
           +D   SS+D+E D         GTGRSYECVFCKRGFTTAQALGGHMNIHRK+RAK RP 
Sbjct: 9   QDSKTSSTDEEADHQPDANDDMGTGRSYECVFCKRGFTTAQALGGHMNIHRKERAKTRPS 68

Query: 59  S-----SSSISDKL---------------TFFPSP-----STWDDH---QRSVHTNN--- 87
           S     +SSIS  +               ++ P P     +  DDH   +  V  +N   
Sbjct: 69  SIPTSLASSISTAVEDQNHPRAALYRAIQSYRPGPPHYFIAPLDDHMNYRTDVPASNTSG 128

Query: 88  -------NNHSNYDSYGQNY-HQHLNMIGD--EIWRGNRSLRVGPSHLHADHDKEKREGA 137
                  N+ S+ D   +NY  +H N++ D  + WR   SL +G      D+ +    G 
Sbjct: 129 VLRPPHANHISDEDLCARNYIPRHRNLLRDDHQDWRSGSSLSLGMGQPSDDYKERVINGG 188

Query: 138 SEE--DELDLELRLGHDP 153
            EE  DELDLELRLGHDP
Sbjct: 189 LEETDDELDLELRLGHDP 206

Source: Malus x domestica

Species: Malus x domestica

Genus: Malus

Family: Rosaceae

Order: Rosales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|357441051|ref|XP_003590803.1| Transcriptional regulator SUPERMAN [Medicago truncatula] gi|355479851|gb|AES61054.1| Transcriptional regulator SUPERMAN [Medicago truncatula]

 Score = 94.0 bits (232), Expect = 2e-17,   Method: Compositional matrix adjust.
 Identities = 71/190 (37%), Positives = 93/190 (48%), Gaps = 50/190 (26%)

Query: 8   DYSKSSSDDETDAGTGRSYECVFCKRGFTTAQALGGHMNIHRKDRAK--NRPPSSSS--- 62
           +YS    DD  D G  RSYEC FCKRGFT AQALGGHMNIHRKDRAK   +P SSSS   
Sbjct: 2   NYSSEEGDDGYDQGKRRSYECTFCKRGFTNAQALGGHMNIHRKDRAKASKQPNSSSSQIG 61

Query: 63  ----ISDKLTFFP-----------------------------SPSTWDDHQRSVHTNNNN 89
                +D+   FP                              P+  + H  +  T+N +
Sbjct: 62  TKFYTNDETMVFPFASEQNSFIGNYQPSNMHGYSYEQPRSYEYPTAPNYHVGNYQTSNVH 121

Query: 90  HSNYDSYGQ----NYHQHLNMIGDEIWRGNRSLRVGPSHLHAD--HDKEKREGASEED-E 142
             +YD  G     N+H +  + G ++     SL++G +  + D  H +  R G  +ED E
Sbjct: 122 GFSYDQQGSSNWPNFHLNQELQGPDL-----SLQIGSTQHYVDDTHHQRIRRGNDQEDIE 176

Query: 143 LDLELRLGHD 152
           +DLELRLG D
Sbjct: 177 VDLELRLGQD 186

Source: Medicago truncatula

Species: Medicago truncatula

Genus: Medicago

Family: Fabaceae

Order: Fabales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|388506292|gb|AFK41212.1| unknown [Medicago truncatula]

 Score = 93.2 bits (230), Expect = 3e-17,   Method: Compositional matrix adjust.
 Identities = 81/200 (40%), Positives = 97/200 (48%), Gaps = 56/200 (28%)

Query: 1   MESNPNEDYSKSSSDDETD--------------AGTGRSYECVFCKRGFTTAQALGGHMN 46
           ME +  +D SKSSSD+  D               G GRSYECVFCKRGFTTAQALGGHMN
Sbjct: 1   MEFSYLQDDSKSSSDENIDRSSDQNNDDDHDHHMGIGRSYECVFCKRGFTTAQALGGHMN 60

Query: 47  IHRKDRAKNR---------PPSSSSIS------DKLTFFPS--PS-----------TWDD 78
           IHRKDRA N          PPSSS +         L F+ +  PS           +   
Sbjct: 61  IHRKDRANNNKSATKTNFAPPSSSKLVVDHDNYGDLGFYSTINPSHLARGGYYSSISSTT 120

Query: 79  HQRSVHTNNNNHSNYDSYGQNYHQHL-----NMIGDEIWRGNRSLRVGPSHLHADHDKEK 133
               V + N +   + S+ Q Y + L      M G + WRG  SL   P       +K+K
Sbjct: 121 TTPEVDSLNYHQIYFPSHVQ-YSEMLCVENQRMFGQD-WRG-LSLYTNPL------NKDK 171

Query: 134 REGASEEDELDLELRLGHDP 153
            E  +E  ELDLELRLGH P
Sbjct: 172 IENNNEVGELDLELRLGHYP 191

Source: Medicago truncatula

Species: Medicago truncatula

Genus: Medicago

Family: Fabaceae

Order: Fabales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|449462920|ref|XP_004149183.1| PREDICTED: uncharacterized protein LOC101219031 [Cucumis sativus]

 Score = 89.7 bits (221), Expect = 3e-16,   Method: Compositional matrix adjust.
 Identities = 59/138 (42%), Positives = 74/138 (53%), Gaps = 34/138 (24%)

Query: 6   NEDYSKSSSDDETD-----AGTGRSYECVFCKRGFTTAQALGGHMNIHRKDRAKNRP--P 58
           ++D S   + ++TD      G+GRSYECVFCKRGFTTAQALGGHMNIHRKDR KN+P  P
Sbjct: 19  DQDQSSKPTTEDTDQINNEMGSGRSYECVFCKRGFTTAQALGGHMNIHRKDRVKNKPNTP 78

Query: 59  S--------SSSISDKL----------------TFFPSPSTWDDHQRSVHTNNNNHSNYD 94
           S        SS++   L                T+FP+ STW        T++  H +  
Sbjct: 79  SKPEPFTNHSSTLRPMLTTTAAVTTVSHHQSFQTYFPTSSTW---CLGTTTSSPPHDHQF 135

Query: 95  SYGQNYHQHLNMIGDEIW 112
           SY  N  Q LN   D+ W
Sbjct: 136 SYVHNNPQVLNTFKDQNW 153

Source: Cucumis sativus

Species: Cucumis sativus

Genus: Cucumis

Family: Cucurbitaceae

Order: Cucurbitales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|225432987|ref|XP_002280778.1| PREDICTED: probable transcriptional regulator RABBIT EARS-like [Vitis vinifera]

 Score = 87.0 bits (214), Expect = 2e-15,   Method: Compositional matrix adjust.
 Identities = 62/164 (37%), Positives = 80/164 (48%), Gaps = 43/164 (26%)

Query: 21  GTGRSYECVFCKRGFTTAQALGGHMNIHRKDRAKNRPPSSSSISDK-------------- 66
           G  RSYEC +CKRGFT AQALGGHMNIHRKDRAK +  + SS S K              
Sbjct: 27  GGRRSYECTYCKRGFTNAQALGGHMNIHRKDRAKTKQVTGSSGSSKPNEEYMAYKDFAPF 86

Query: 67  -----------------LTFFPSPSTWDDHQRSVHTNNNNHSNYDSYGQNYHQHLNMIGD 109
                             T+FP   +   +  + H NN +  N +    N  Q L     
Sbjct: 87  SSQPARYYESCEAQRNYPTYFPPSDSSSRYPHAYHENNWSAPNSERLSFN-EQRLG---- 141

Query: 110 EIWRGNRSLRVGPSHLHADHDKEKREGASEEDELDLELRLGHDP 153
                N SL++GP++   D   E++ G  ++DE+DLELRLGH P
Sbjct: 142 ----ANLSLQIGPTY-RGDSGIERQYG--KDDEVDLELRLGHYP 178

Source: Vitis vinifera

Species: Vitis vinifera

Genus: Vitis

Family: Vitaceae

Order: Vitales

Phylum: Streptophyta

Superkingdom: Eukaryota

---

Prediction of Gene Ontology (GO) Terms

Close Homologs with Gene Ontology terms Detected by BLAST

Original result of BLAST against Gene Ontology (AMIGO)

ID	Length	Definition	Q cover	H cover	Identity	E-value
Query	153
TAIR|locus:2086193	172	URO "AT3G23140" [Arabidopsis t	0.535	0.476	0.452	1e-11
TAIR|locus:2158367	137	AT5G43540 "AT5G43540" [Arabido	0.705	0.788	0.366	2.8e-11
TAIR|locus:2086268	204	SUP "AT3G23130" [Arabidopsis t	0.437	0.328	0.478	7.4e-11
TAIR|locus:2083574	172	TAC1 "AT3G09290" [Arabidopsis	0.333	0.296	0.576	1.5e-10
TAIR|locus:2040726	304	ZFP10 "AT2G37740" [Arabidopsis	0.601	0.302	0.37	4.7e-10
TAIR|locus:2084390	142	AT3G53820 "AT3G53820" [Arabido	0.215	0.232	0.787	8.4e-10
TAIR|locus:2129495	204	AT4G17810 "AT4G17810" [Arabido	0.267	0.200	0.585	1.1e-09
TAIR|locus:505006582	226	RBE "AT5G06070" [Arabidopsis t	0.294	0.199	0.586	2.7e-09
TAIR|locus:2053796	214	ZFP11 "AT2G42410" [Arabidopsis	0.235	0.168	0.648	1e-08
TAIR|locus:2064579	257	ZFP8 "AT2G41940" [Arabidopsis	0.581	0.346	0.329	1.8e-08

TAIR|locus:2086193 URO "AT3G23140" [Arabidopsis thaliana (taxid:3702)]

 Score = 159 (61.0 bits), Expect = 1.0e-11, P = 1.0e-11
 Identities = 43/95 (45%), Positives = 52/95 (54%)

Query:    15 DDETDAGTG-----RSYECVFCKRGFTTAQALGGHMNIHRKDRAKNRPPSSSSISDKLTF 69
             D + D+G+G     R+Y+C  CKRGFT  QALGGH NIHR++R   R PSSSS S    F
Sbjct:     5 DKQIDSGSGSGENRRTYDCDICKRGFTNPQALGGHNNIHRRER--ERYPSSSSSSHSFPF 62

Query:    70 -FPSPSTWDDHQRSVHTNNNNHSNYDSYGQNY-HQ 102
               P PS       S  TN  N   Y    ++Y HQ
Sbjct:    63 SLPLPS----QSPSSSTNFTNPPPYFPTIESYLHQ 93

GO:0003676 "nucleic acid binding" evidence=ISS

GO:0005622 "intracellular" evidence=IEA

GO:0005634 "nucleus" evidence=ISM

GO:0008270 "zinc ion binding" evidence=IEA;ISS

GO:0003700 "sequence-specific DNA binding transcription factor activity" evidence=ISS

GO:0006355 "regulation of transcription, DNA-dependent" evidence=TAS

GO:0010252 "auxin homeostasis" evidence=IMP

TAIR|locus:2158367 AT5G43540 "AT5G43540" [Arabidopsis thaliana (taxid:3702)]

 Score = 155 (59.6 bits), Expect = 2.8e-11, P = 2.8e-11
 Identities = 44/120 (36%), Positives = 63/120 (52%)

Query:    11 KSSSDDETDAGTGRSYECVFCKRGFTTAQALGGHMNIHRKDR---AKNRPPSSSSISDKL 67
             + +S       T R YEC FCKRGFT AQALGGHMNIHR+DR   AK +  +  ++S   
Sbjct:    20 RRTSSSSVSTVTRRMYECTFCKRGFTNAQALGGHMNIHRRDRLNKAKVQNDADVALSQTH 79

Query:    68 TFFPSPSTWDDHQR--SV--HTNNNNHSNYDSYGQNYHQHLNMI--GDEIWRGNRSLRVG 121
               F   S    +++  SV   T  +N+  +   G    +  N++  G+EI   +  LR+G
Sbjct:    80 RCFHVASDLGGYEQVDSVVLRTTTSNYIQHLRIGSMATRRENVVVEGNEI---DLELRLG 136

GO:0003676 "nucleic acid binding" evidence=ISS

GO:0005622 "intracellular" evidence=IEA

GO:0005634 "nucleus" evidence=ISM

GO:0008270 "zinc ion binding" evidence=IEA;ISS

GO:0003700 "sequence-specific DNA binding transcription factor activity" evidence=ISS

GO:0006355 "regulation of transcription, DNA-dependent" evidence=TAS

TAIR|locus:2086268 SUP "AT3G23130" [Arabidopsis thaliana (taxid:3702)]

 Score = 151 (58.2 bits), Expect = 7.4e-11, P = 7.4e-11
 Identities = 34/71 (47%), Positives = 42/71 (59%)

Query:     8 DYSKSSSDDETDAGTG---RSYECVFCKRGFTTAQALGGHMNIHRKDRAKNR-PPSSSSI 63
             DY     D +   G     RSY C FCKR F +AQALGGHMN+HR+DRA+ R   S SS 
Sbjct:    26 DYDNCQQDHDYLLGFSWPPRSYTCSFCKREFRSAQALGGHMNVHRRDRARLRLQQSPSSS 85

Query:    64 SDKLTFFPSPS 74
             S     +P+P+
Sbjct:    86 STPSPPYPNPN 96

GO:0003676 "nucleic acid binding" evidence=ISS

GO:0005622 "intracellular" evidence=IEA

GO:0005634 "nucleus" evidence=ISM

GO:0008270 "zinc ion binding" evidence=IEA;ISS

GO:0003700 "sequence-specific DNA binding transcription factor activity" evidence=ISS;IMP;TAS

GO:0003677 "DNA binding" evidence=IDA;TAS

GO:0045892 "negative regulation of transcription, DNA-dependent" evidence=IMP

GO:0008361 "regulation of cell size" evidence=IMP

GO:0009755 "hormone-mediated signaling pathway" evidence=IMP

GO:0010160 "formation of organ boundary" evidence=IMP

GO:0042127 "regulation of cell proliferation" evidence=IMP

GO:0010093 "specification of floral organ identity" evidence=IGI;RCA

GO:0048440 "carpel development" evidence=RCA

GO:0009908 "flower development" evidence=IMP

TAIR|locus:2083574 TAC1 "AT3G09290" [Arabidopsis thaliana (taxid:3702)]

 Score = 148 (57.2 bits), Expect = 1.5e-10, P = 1.5e-10
 Identities = 30/52 (57%), Positives = 36/52 (69%)

Query:     6 NEDYSKSSSDDETDA-GTGRSYECVFCKRGFTTAQALGGHMNIHRKDRAKNR 56
             ++  SK+S     D+    RSY C FC RGF+ AQALGGHMNIHR+DRAK R
Sbjct:    14 SDSISKNSHQGVDDSLNQSRSYVCSFCIRGFSNAQALGGHMNIHRRDRAKLR 65

GO:0003676 "nucleic acid binding" evidence=ISS

GO:0005622 "intracellular" evidence=IEA

GO:0005634 "nucleus" evidence=ISM

GO:0008270 "zinc ion binding" evidence=IEA;ISS

GO:0006355 "regulation of transcription, DNA-dependent" evidence=TAS

GO:0003700 "sequence-specific DNA binding transcription factor activity" evidence=IMP

GO:0051973 "positive regulation of telomerase activity" evidence=IGI

GO:0006826 "iron ion transport" evidence=RCA

GO:0010043 "response to zinc ion" evidence=RCA

GO:0010106 "cellular response to iron ion starvation" evidence=RCA

GO:0010167 "response to nitrate" evidence=RCA

GO:0015706 "nitrate transport" evidence=RCA

TAIR|locus:2040726 ZFP10 "AT2G37740" [Arabidopsis thaliana (taxid:3702)]

 Score = 148 (57.2 bits), Expect = 4.7e-10, P = 4.7e-10
 Identities = 37/100 (37%), Positives = 54/100 (54%)

Query:     2 ESNPNEDYSKSSSDDETDAGT---GRSYECVFCKRGFTTAQALGGHMNIHRKDRAKNRPP 58
             +SN    + + +  ++  AG+    RSY C FC+R F +AQALGGHMN+HR+DRA+ +  
Sbjct:    12 KSNKESSWEELAFAEDDAAGSLWPPRSYTCSFCRREFKSAQALGGHMNVHRRDRARLKQA 71

Query:    59 SSSSISDKLTFFPS-PSTWDD---HQRSVHTNN-NNHSNY 93
                 +  K +  P  PS  D    H+ S +T   N   NY
Sbjct:    72 DDQYLFPKSSSSPEYPSHKDSDNIHETSCYTLVFNTKPNY 111

GO:0003676 "nucleic acid binding" evidence=ISS

GO:0005622 "intracellular" evidence=IEA

GO:0005634 "nucleus" evidence=ISM

GO:0008270 "zinc ion binding" evidence=IEA;ISS

GO:0003700 "sequence-specific DNA binding transcription factor activity" evidence=ISS

GO:0006355 "regulation of transcription, DNA-dependent" evidence=TAS

TAIR|locus:2084390 AT3G53820 "AT3G53820" [Arabidopsis thaliana (taxid:3702)]

 Score = 141 (54.7 bits), Expect = 8.4e-10, P = 8.4e-10
 Identities = 26/33 (78%), Positives = 28/33 (84%)

Query:    24 RSYECVFCKRGFTTAQALGGHMNIHRKDRAKNR 56
             R Y C FC+RGF+ AQALGGHMNIHRKDRAK R
Sbjct:    19 RPYICEFCERGFSNAQALGGHMNIHRKDRAKLR 51

GO:0003676 "nucleic acid binding" evidence=ISS

GO:0005622 "intracellular" evidence=IEA

GO:0005634 "nucleus" evidence=ISM

GO:0008270 "zinc ion binding" evidence=IEA;ISS

GO:0003700 "sequence-specific DNA binding transcription factor activity" evidence=ISS

GO:0006355 "regulation of transcription, DNA-dependent" evidence=TAS

TAIR|locus:2129495 AT4G17810 "AT4G17810" [Arabidopsis thaliana (taxid:3702)]

 Score = 140 (54.3 bits), Expect = 1.1e-09, P = 1.1e-09
 Identities = 24/41 (58%), Positives = 32/41 (78%)

Query:    24 RSYECVFCKRGFTTAQALGGHMNIHRKDRAKNRPPSSSSIS 64
             RSY C FC+R F +AQALGGHMN+HR+DRA +R    S+++
Sbjct:    44 RSYTCNFCRREFRSAQALGGHMNVHRRDRASSRAHQGSTVA 84

GO:0003676 "nucleic acid binding" evidence=ISS

GO:0005622 "intracellular" evidence=IEA

GO:0005634 "nucleus" evidence=ISM

GO:0008270 "zinc ion binding" evidence=IEA;ISS

GO:0003700 "sequence-specific DNA binding transcription factor activity" evidence=ISS

GO:0006355 "regulation of transcription, DNA-dependent" evidence=TAS

GO:0006417 "regulation of translation" evidence=RCA

GO:0009657 "plastid organization" evidence=RCA

GO:0009965 "leaf morphogenesis" evidence=RCA

GO:0030154 "cell differentiation" evidence=RCA

GO:0045893 "positive regulation of transcription, DNA-dependent" evidence=RCA

TAIR|locus:505006582 RBE "AT5G06070" [Arabidopsis thaliana (taxid:3702)]

 Score = 137 (53.3 bits), Expect = 2.7e-09, P = 2.7e-09
 Identities = 27/46 (58%), Positives = 34/46 (73%)

Query:    24 RSYECVFCKRGFTTAQALGGHMNIHRKDRAKNRPPS-SSSISDKLT 68
             RSY C FC R F +AQALGGHMN+HR+DRA+ +  S S S +D+ T
Sbjct:    53 RSYSCSFCGREFKSAQALGGHMNVHRRDRARLKQQSLSPSSTDQAT 98

GO:0003676 "nucleic acid binding" evidence=ISS

GO:0005622 "intracellular" evidence=IEA

GO:0005634 "nucleus" evidence=ISM;IDA

GO:0008270 "zinc ion binding" evidence=IEA;ISS

GO:0009934 "regulation of meristem structural organization" evidence=NAS

GO:0003700 "sequence-specific DNA binding transcription factor activity" evidence=ISS

GO:0006355 "regulation of transcription, DNA-dependent" evidence=TAS

GO:0048441 "petal development" evidence=IMP

GO:0048446 "petal morphogenesis" evidence=RCA

GO:0009409 "response to cold" evidence=IEP

TAIR|locus:2053796 ZFP11 "AT2G42410" [Arabidopsis thaliana (taxid:3702)]

 Score = 131 (51.2 bits), Expect = 1.0e-08, P = 1.0e-08
 Identities = 24/37 (64%), Positives = 30/37 (81%)

Query:    24 RSYECVFCKRGFTTAQALGGHMNIHRKDRAKNRP-PS 59
             ++Y C FC+R F +AQALGGHMN+HR+DRAK R  PS
Sbjct:    47 KNYTCSFCRREFRSAQALGGHMNVHRRDRAKLRQIPS 83

GO:0003676 "nucleic acid binding" evidence=ISS

GO:0005622 "intracellular" evidence=IEA

GO:0005634 "nucleus" evidence=ISM

GO:0008270 "zinc ion binding" evidence=IEA;ISS

GO:0003700 "sequence-specific DNA binding transcription factor activity" evidence=ISS

GO:0006355 "regulation of transcription, DNA-dependent" evidence=TAS

TAIR|locus:2064579 ZFP8 "AT2G41940" [Arabidopsis thaliana (taxid:3702)]

 Score = 132 (51.5 bits), Expect = 1.8e-08, P = 1.8e-08
 Identities = 32/97 (32%), Positives = 48/97 (49%)

Query:     2 ESNPN-EDYSKSSSDD-ETDAGTGRSYECVFCKRGFTTAQALGGHMNIHRKDRAKNRPPS 59
             ES+ N +D  K    D + D    R +EC +C R F T+QALGGH N H+++R   +  S
Sbjct:    69 ESSENIKDKDKEKDKDKDKDNNNNRRFECHYCFRNFPTSQALGGHQNAHKRERQHAKRGS 128

Query:    60 SSSISDKLTFFPSPSTWDDHQRSVHTNNNNHSNYDSY 96
              +S      +       D H      NN++H +Y S+
Sbjct:   129 MTS------YLHHHQPHDPHHIYGFLNNHHHRHYPSW 159

GO:0003676 "nucleic acid binding" evidence=ISS

GO:0005634 "nucleus" evidence=ISM

GO:0008270 "zinc ion binding" evidence=IEA;ISS

GO:0003700 "sequence-specific DNA binding transcription factor activity" evidence=ISS

GO:0006355 "regulation of transcription, DNA-dependent" evidence=RCA;TAS

GO:0010026 "trichome differentiation" evidence=IMP

GO:0000165 "MAPK cascade" evidence=RCA

GO:0006612 "protein targeting to membrane" evidence=RCA

GO:0009617 "response to bacterium" evidence=RCA

GO:0009793 "embryo development ending in seed dormancy" evidence=RCA

GO:0009862 "systemic acquired resistance, salicylic acid mediated signaling pathway" evidence=RCA

GO:0009867 "jasmonic acid mediated signaling pathway" evidence=RCA

GO:0009965 "leaf morphogenesis" evidence=RCA

GO:0010027 "thylakoid membrane organization" evidence=RCA

GO:0010228 "vegetative to reproductive phase transition of meristem" evidence=RCA

GO:0010310 "regulation of hydrogen peroxide metabolic process" evidence=RCA

GO:0010363 "regulation of plant-type hypersensitive response" evidence=RCA

GO:0016226 "iron-sulfur cluster assembly" evidence=RCA

GO:0030154 "cell differentiation" evidence=RCA

GO:0031348 "negative regulation of defense response" evidence=RCA

GO:0035304 "regulation of protein dephosphorylation" evidence=RCA

GO:0045893 "positive regulation of transcription, DNA-dependent" evidence=RCA

GO:0048481 "ovule development" evidence=RCA

---

Prediction of Enzyme Commission (EC) Number

EC Number Prediction by Annotation Transfer from SWISS-PROT Entries

Original result of BLAST against SWISS-PROT

No confident hit for EC number transfering in SWISSPROT detected by BLAST

EC Number Prediction by Ezypred Server

Original result from Ezypred Server

Fail to connect to Ezypred Server

EC Number Prediction by EFICAz Software

No EC number assignment, probably not an enzyme!

---

Prediction of Functionally Associated Proteins

Functionally Associated Proteins Detected by STRING

Original result from the STRING server

Fail to connect to STRING server

---

Conserved Domains and Related Protein Families

Conserved Domains Detected by RPS-BLAST

Original result of RPS-BLAST against CDD database part I

Conserved Domains Detected by HHsearch

Original result of HHsearch against CDD database

ID	Length	Definition	Probability
Query	153
KOG2462	279	consensus C2H2-type Zn-finger protein [Transcripti	99.82
KOG2462	279	consensus C2H2-type Zn-finger protein [Transcripti	99.63
KOG3623	1007	consensus Homeobox transcription factor SIP1 [Tran	99.42
KOG3576	267	consensus Ovo and related transcription factors [T	99.32
KOG3623	1007	consensus Homeobox transcription factor SIP1 [Tran	99.12
KOG1074	958	consensus Transcriptional repressor SALM [Transcri	99.07
PHA02768	55	hypothetical protein; Provisional	99.07
KOG1074	958	consensus Transcriptional repressor SALM [Transcri	98.95
KOG3576	267	consensus Ovo and related transcription factors [T	98.95
PHA00733	128	hypothetical protein	98.65
KOG3608	467	consensus Zn finger proteins [General function pre	98.62
PHA00733	128	hypothetical protein	98.52
PHA00616	44	hypothetical protein	98.5
PF13465	26	zf-H2C2_2: Zinc-finger double domain; PDB: 2EN7_A	98.5
PHA02768	55	hypothetical protein; Provisional	98.4
PHA00732	79	hypothetical protein	98.26
PLN03086	567	PRLI-interacting factor K; Provisional	98.26
KOG3608	467	consensus Zn finger proteins [General function pre	98.13
PLN03086	567	PRLI-interacting factor K; Provisional	98.1
PF13465	26	zf-H2C2_2: Zinc-finger double domain; PDB: 2EN7_A	98.09
PF00096	23	zf-C2H2: Zinc finger, C2H2 type; InterPro: IPR0070	98.02
PF13912	27	zf-C2H2_6: C2H2-type zinc finger; PDB: 1JN7_A 1FU9	97.63
COG5189	423	SFP1 Putative transcriptional repressor regulating	97.59
PF13894	24	zf-C2H2_4: C2H2-type zinc finger; PDB: 2ELX_A 2EPP	97.52
PF05605	54	zf-Di19: Drought induced 19 protein (Di19), zinc-b	97.48
PHA00616	44	hypothetical protein	97.47
KOG3993	500	consensus Transcription factor (contains Zn finger	97.25
PF09237	54	GAGA: GAGA factor; InterPro: IPR015318 Zinc finger	97.18
smart00355	26	ZnF_C2H2 zinc finger.	97.11
PHA00732	79	hypothetical protein	97.03
PRK04860	160	hypothetical protein; Provisional	97.0
PF12874	25	zf-met: Zinc-finger of C2H2 type; PDB: 1ZU1_A 2KVG	96.66
PF00096	23	zf-C2H2: Zinc finger, C2H2 type; InterPro: IPR0070	95.87
COG5048	467	FOG: Zn-finger [General function prediction only]	95.59
PF12171	27	zf-C2H2_jaz: Zinc-finger double-stranded RNA-bindi	95.44
PF12756	100	zf-C2H2_2: C2H2 type zinc-finger (2 copies); PDB:	95.33
PF13909	24	zf-H2C2_5: C2H2-type zinc-finger domain; PDB: 1X5W	95.13
COG5189	423	SFP1 Putative transcriptional repressor regulating	95.0
PF13913	25	zf-C2HC_2: zinc-finger of a C2HC-type	94.9
KOG3993	500	consensus Transcription factor (contains Zn finger	94.76
PF13912	27	zf-C2H2_6: C2H2-type zinc finger; PDB: 1JN7_A 1FU9	94.62
smart00355	26	ZnF_C2H2 zinc finger.	94.33
PF13894	24	zf-C2H2_4: C2H2-type zinc finger; PDB: 2ELX_A 2EPP	94.13
smart00451	35	ZnF_U1 U1-like zinc finger. Family of C2H2-type zi	93.5
PF09237	54	GAGA: GAGA factor; InterPro: IPR015318 Zinc finger	93.32
PF05605	54	zf-Di19: Drought induced 19 protein (Di19), zinc-b	93.3
PRK04860	160	hypothetical protein; Provisional	92.78
PF12756	100	zf-C2H2_2: C2H2 type zinc-finger (2 copies); PDB:	92.05
cd00350	33	rubredoxin_like Rubredoxin_like; nonheme iron bind	91.1
KOG2893	341	consensus Zn finger protein [General function pred	87.52
KOG1146	1406	consensus Homeobox protein [General function predi	86.02
COG1592	166	Rubrerythrin [Energy production and conversion]	84.65
COG5048	467	FOG: Zn-finger [General function prediction only]	84.64
cd00729	34	rubredoxin_SM Rubredoxin, Small Modular nonheme ir	82.82
TIGR00373	158	conserved hypothetical protein TIGR00373. This fam	80.89
PRK06266	178	transcription initiation factor E subunit alpha; V	80.71

>KOG2462 consensus C2H2-type Zn-finger protein [Transcription]

Probab=99.82  E-value=2e-21  Score=150.70  Aligned_cols=92  Identities=17%  Similarity=0.330  Sum_probs=77.1

Q ss_pred             CCCcccccCCCCcceeccccccccCChhHHHHHHHhhcCCCCCCCCCCCCCCCCCCccCCCCChhhhccccccCCCCCCC
Q 044013           12 SSSDDETDAGTGRSYECVFCKRGFTTAQALGGHMNIHRKDRAKNRPPSSSSISDKLTFFPSPSTWDDHQRSVHTNNNNHS   91 (153)
Q Consensus        12 ~~~h~~~~~~gekp~~C~~Cgk~F~~~~~L~~H~r~H~gekp~~C~~c~~~~Cgk~~~F~~~~~L~~H~~~~Ht~~kp~~   91 (153)
                      |..|.++|+   -|++|.+|||.|..++-|++|+|+|||||||.|+.|+++       |+..++|..||+ +|.+.|+| 
T Consensus       177 LkMHirTH~---l~c~C~iCGKaFSRPWLLQGHiRTHTGEKPF~C~hC~kA-------FADRSNLRAHmQ-THS~~K~~-  244 (279)
T KOG2462|consen  177 LKMHIRTHT---LPCECGICGKAFSRPWLLQGHIRTHTGEKPFSCPHCGKA-------FADRSNLRAHMQ-THSDVKKH-  244 (279)
T ss_pred             HhhHhhccC---CCcccccccccccchHHhhcccccccCCCCccCCcccch-------hcchHHHHHHHH-hhcCCccc-
Confidence            445555555   489999999999999999999999999999999955555       999999999999 99999999 


Q ss_pred             CCCCCccccccCCcccchhhhcCCC
Q 044013           92 NYDSYGQNYHQHLNMIGDEIWRGNR  116 (153)
Q Consensus        92 ~~~~~~~~f~~~~~~~~~~~~~~~~  116 (153)
                      .|..|+|+|++.. .++.+....++
T Consensus       245 qC~~C~KsFsl~S-yLnKH~ES~C~  268 (279)
T KOG2462|consen  245 QCPRCGKSFALKS-YLNKHSESACL  268 (279)
T ss_pred             cCcchhhHHHHHH-HHHHhhhhccc
Confidence            8999999996643 36666554443

>KOG2462 consensus C2H2-type Zn-finger protein [Transcription]

Probab=99.63  E-value=1.5e-16  Score=123.69  Aligned_cols=85  Identities=22%  Similarity=0.416  Sum_probs=72.5

Q ss_pred             CCCCCcccccCC--CCcceeccccccccCChhHHHHHHHhhcCCCCCCCCCCCCCCCCCCccCCCCChhhhccccccCCC
Q 044013           10 SKSSSDDETDAG--TGRSYECVFCKRGFTTAQALGGHMNIHRKDRAKNRPPSSSSISDKLTFFPSPSTWDDHQRSVHTNN   87 (153)
Q Consensus        10 ~~~~~h~~~~~~--gekp~~C~~Cgk~F~~~~~L~~H~r~H~gekp~~C~~c~~~~Cgk~~~F~~~~~L~~H~~~~Ht~~   87 (153)
                      +.|+.|...|-.  ..+.+.|.+|+|.|....+|+.|+|+|+  -|++|.     +|||+  |+++=-|+.|+| +||||
T Consensus       144 snLsrHkQ~H~~~~s~ka~~C~~C~K~YvSmpALkMHirTH~--l~c~C~-----iCGKa--FSRPWLLQGHiR-THTGE  213 (279)
T KOG2462|consen  144 SNLSRHKQTHRSLDSKKAFSCKYCGKVYVSMPALKMHIRTHT--LPCECG-----ICGKA--FSRPWLLQGHIR-THTGE  213 (279)
T ss_pred             cccchhhcccccccccccccCCCCCceeeehHHHhhHhhccC--CCcccc-----ccccc--ccchHHhhcccc-cccCC
Confidence            457788765554  3577999999999999999999999999  578888     56666  999999999999 99999


Q ss_pred             CCCCCCCCCccccccCCc
Q 044013           88 NNHSNYDSYGQNYHQHLN  105 (153)
Q Consensus        88 kp~~~~~~~~~~f~~~~~  105 (153)
                      ||| .|..|+|+|....+
T Consensus       214 KPF-~C~hC~kAFADRSN  230 (279)
T KOG2462|consen  214 KPF-SCPHCGKAFADRSN  230 (279)
T ss_pred             CCc-cCCcccchhcchHH
Confidence            999 89999999965444

>KOG3623 consensus Homeobox transcription factor SIP1 [Transcription]

Probab=99.42  E-value=5.5e-14  Score=120.94  Aligned_cols=78  Identities=19%  Similarity=0.364  Sum_probs=72.2

Q ss_pred             CcceeccccccccCChhHHHHHHHhhcCCCCCCCCCCCCCCCCCCccCCCCChhhhccccccCCCCCCCCCCCCcccccc
Q 044013           23 GRSYECVFCKRGFTTAQALGGHMNIHRKDRAKNRPPSSSSISDKLTFFPSPSTWDDHQRSVHTNNNNHSNYDSYGQNYHQ  102 (153)
Q Consensus        23 ekp~~C~~Cgk~F~~~~~L~~H~r~H~gekp~~C~~c~~~~Cgk~~~F~~~~~L~~H~~~~Ht~~kp~~~~~~~~~~f~~  102 (153)
                      .-+|.|+.|.|.|...+.|.+|.--|+|.+||+|.     ||.|+  |..+..|..|+| .|.|+||| .|+-|++.|+.
T Consensus       892 ~gmyaCDqCDK~FqKqSSLaRHKYEHsGqRPyqC~-----iCkKA--FKHKHHLtEHkR-LHSGEKPf-QCdKClKRFSH  962 (1007)
T KOG3623|consen  892 DGMYACDQCDKAFQKQSSLARHKYEHSGQRPYQCI-----ICKKA--FKHKHHLTEHKR-LHSGEKPF-QCDKCLKRFSH  962 (1007)
T ss_pred             cccchHHHHHHHHHhhHHHHHhhhhhcCCCCcccc-----hhhHh--hhhhhhhhhhhh-hccCCCcc-hhhhhhhhccc
Confidence            35899999999999999999999999999999999     66666  999999999999 99999999 79999999998


Q ss_pred             CCcccchh
Q 044013          103 HLNMIGDE  110 (153)
Q Consensus       103 ~~~~~~~~  110 (153)
                      +++ +.++
T Consensus       963 SGS-YSQH  969 (1007)
T KOG3623|consen  963 SGS-YSQH  969 (1007)
T ss_pred             ccc-hHhh
Confidence            888 6666

>KOG3576 consensus Ovo and related transcription factors [Transcription]

Probab=99.32  E-value=1.2e-13  Score=103.60  Aligned_cols=78  Identities=17%  Similarity=0.300  Sum_probs=70.1

Q ss_pred             CcceeccccccccCChhHHHHHHHhhcCCCCCCCCCCCCCCCCCCccCCCCChhhhccccccCCCCCCCCCCCCcccccc
Q 044013           23 GRSYECVFCKRGFTTAQALGGHMNIHRKDRAKNRPPSSSSISDKLTFFPSPSTWDDHQRSVHTNNNNHSNYDSYGQNYHQ  102 (153)
Q Consensus        23 ekp~~C~~Cgk~F~~~~~L~~H~r~H~gekp~~C~~c~~~~Cgk~~~F~~~~~L~~H~~~~Ht~~kp~~~~~~~~~~f~~  102 (153)
                      ...|.|.+|+|.|....-|.+|+..|...|.|.|..||+.       |.....|++|++ +|||.+|| .|..|.++|.+
T Consensus       115 ~d~ftCrvCgK~F~lQRmlnrh~kch~~vkr~lct~cgkg-------fndtfdlkrh~r-thtgvrpy-kc~~c~kaftq  185 (267)
T KOG3576|consen  115 QDSFTCRVCGKKFGLQRMLNRHLKCHSDVKRHLCTFCGKG-------FNDTFDLKRHTR-THTGVRPY-KCSLCEKAFTQ  185 (267)
T ss_pred             CCeeeeehhhhhhhHHHHHHHHhhhccHHHHHHHhhccCc-------ccchhhhhhhhc-cccCcccc-chhhhhHHHHh
Confidence            3569999999999999999999999999999999966655       999999999999 99999999 89999999988


Q ss_pred             CCcccchh
Q 044013          103 HLNMIGDE  110 (153)
Q Consensus       103 ~~~~~~~~  110 (153)
                      ..+ +..+
T Consensus       186 rcs-lesh  192 (267)
T KOG3576|consen  186 RCS-LESH  192 (267)
T ss_pred             hcc-HHHH
Confidence            777 4443

>KOG3623 consensus Homeobox transcription factor SIP1 [Transcription]

Probab=99.12  E-value=1e-11  Score=107.22  Aligned_cols=63  Identities=19%  Similarity=0.484  Sum_probs=56.1

Q ss_pred             CCCCcccccCCCCcceeccccccccCChhHHHHHHHhhcCCCCCCCCCCCCCCCCCCccCCCCChhhhccc
Q 044013           11 KSSSDDETDAGTGRSYECVFCKRGFTTAQALGGHMNIHRKDRAKNRPPSSSSISDKLTFFPSPSTWDDHQR   81 (153)
Q Consensus        11 ~~~~h~~~~~~gekp~~C~~Cgk~F~~~~~L~~H~r~H~gekp~~C~~c~~~~Cgk~~~F~~~~~L~~H~~   81 (153)
                      .|.+|.=.|++ .|||+|.+|.|+|..+-.|..|+|.|.|||||.|..|++.       |+...+...||.
T Consensus       909 SLaRHKYEHsG-qRPyqC~iCkKAFKHKHHLtEHkRLHSGEKPfQCdKClKR-------FSHSGSYSQHMN  971 (1007)
T KOG3623|consen  909 SLARHKYEHSG-QRPYQCIICKKAFKHKHHLTEHKRLHSGEKPFQCDKCLKR-------FSHSGSYSQHMN  971 (1007)
T ss_pred             HHHHhhhhhcC-CCCcccchhhHhhhhhhhhhhhhhhccCCCcchhhhhhhh-------cccccchHhhhc
Confidence            35555545555 9999999999999999999999999999999999988888       999999999996

>KOG1074 consensus Transcriptional repressor SALM [Transcription]

Probab=99.07  E-value=6.5e-11  Score=103.47  Aligned_cols=78  Identities=17%  Similarity=0.339  Sum_probs=65.4

Q ss_pred             cceeccccccccCChhHHHHHHHhhcCCCCCCCCCCCCCCCCCCccCCCCChhhhccccccCCCCCCC---CCC---CCc
Q 044013           24 RSYECVFCKRGFTTAQALGGHMNIHRKDRAKNRPPSSSSISDKLTFFPSPSTWDDHQRSVHTNNNNHS---NYD---SYG   97 (153)
Q Consensus        24 kp~~C~~Cgk~F~~~~~L~~H~r~H~gekp~~C~~c~~~~Cgk~~~F~~~~~L~~H~~~~Ht~~kp~~---~~~---~~~   97 (153)
                      -|-+|.+|.+..+-+++|+.|.|+|+||+||+|.     |||++  |+++.+|+.||. +|....|+.   +|.   +|-
T Consensus       604 dPNqCiiC~rVlSC~saLqmHyrtHtGERPFkCK-----iCgRA--FtTkGNLkaH~~-vHka~p~~R~q~ScP~~~ic~  675 (958)
T KOG1074|consen  604 DPNQCIICLRVLSCPSALQMHYRTHTGERPFKCK-----ICGRA--FTTKGNLKAHMS-VHKAKPPARVQFSCPSTFICQ  675 (958)
T ss_pred             CccceeeeeecccchhhhhhhhhcccCcCccccc-----cccch--hccccchhhccc-ccccCccccccccCCchhhhc
Confidence            4789999999999999999999999999999999     66666  999999999999 998877653   677   888


Q ss_pred             cccccCCcccchh
Q 044013           98 QNYHQHLNMIGDE  110 (153)
Q Consensus        98 ~~f~~~~~~~~~~  110 (153)
                      +.|..... +.++
T Consensus       676 ~kftn~V~-lpQh  687 (958)
T KOG1074|consen  676 KKFTNAVT-LPQH  687 (958)
T ss_pred             cccccccc-ccce
Confidence            88854443 4444

>PHA02768 hypothetical protein; Provisional

Probab=99.07  E-value=9.5e-11  Score=70.74  Aligned_cols=44  Identities=14%  Similarity=0.326  Sum_probs=38.3

Q ss_pred             ceeccccccccCChhHHHHHHHhhcCCCCCCCCCCCCCCCCCCccCCCCChhh
Q 044013           25 SYECVFCKRGFTTAQALGGHMNIHRKDRAKNRPPSSSSISDKLTFFPSPSTWD   77 (153)
Q Consensus        25 p~~C~~Cgk~F~~~~~L~~H~r~H~gekp~~C~~c~~~~Cgk~~~F~~~~~L~   77 (153)
                      -|+|++||+.|+..++|..|+++|+  +||+|..     |+|+  |.+.+.|.
T Consensus         5 ~y~C~~CGK~Fs~~~~L~~H~r~H~--k~~kc~~-----C~k~--f~~~s~l~   48 (55)
T PHA02768          5 GYECPICGEIYIKRKSMITHLRKHN--TNLKLSN-----CKRI--SLRTGEYI   48 (55)
T ss_pred             ccCcchhCCeeccHHHHHHHHHhcC--CcccCCc-----ccce--ecccceeE
Confidence            4899999999999999999999999  7999984     4555  99888775

>KOG1074 consensus Transcriptional repressor SALM [Transcription]

Probab=98.95  E-value=4.6e-10  Score=98.25  Aligned_cols=57  Identities=21%  Similarity=0.363  Sum_probs=51.5

Q ss_pred             ceeccccccccCChhHHHHHHHhhcCCCCCCCCCCCCCCCCCCccCCCCChhhhccccccCCCCC
Q 044013           25 SYECVFCKRGFTTAQALGGHMNIHRKDRAKNRPPSSSSISDKLTFFPSPSTWDDHQRSVHTNNNN   89 (153)
Q Consensus        25 p~~C~~Cgk~F~~~~~L~~H~r~H~gekp~~C~~c~~~~Cgk~~~F~~~~~L~~H~~~~Ht~~kp   89 (153)
                      +++|.+|+|.|...++|+.|.|.|||++||+|.+|+.+       |+++.+|+.|.. .|+-+-|
T Consensus       353 khkCr~CakvfgS~SaLqiHlRSHTGERPfqCnvCG~~-------FSTkGNLKvH~~-rH~e~~p  409 (958)
T KOG1074|consen  353 KHKCRFCAKVFGSDSALQIHLRSHTGERPFQCNVCGNR-------FSTKGNLKVHFQ-RHREKYP  409 (958)
T ss_pred             cchhhhhHhhcCchhhhhhhhhccCCCCCeeecccccc-------cccccceeeeee-eccccCC
Confidence            47899999999999999999999999999999977777       999999999998 7776554

>KOG3576 consensus Ovo and related transcription factors [Transcription]

Probab=98.95  E-value=3.2e-11  Score=90.73  Aligned_cols=69  Identities=19%  Similarity=0.342  Sum_probs=57.0

Q ss_pred             CCCcccccCCCCcceeccccccccCChhHHHHHHHhhcCCCCCCCCCCCCCCCCCCccCCCCChhhhccccccCCCC
Q 044013           12 SSSDDETDAGTGRSYECVFCKRGFTTAQALGGHMNIHRKDRAKNRPPSSSSISDKLTFFPSPSTWDDHQRSVHTNNN   88 (153)
Q Consensus        12 ~~~h~~~~~~gekp~~C~~Cgk~F~~~~~L~~H~r~H~gekp~~C~~c~~~~Cgk~~~F~~~~~L~~H~~~~Ht~~k   88 (153)
                      |..|++-+.. .|.|.|..|||.|...-.|++|+|+|||.+||+|..|+++       |.+..+|..|.+.+|.-..
T Consensus       133 lnrh~kch~~-vkr~lct~cgkgfndtfdlkrh~rthtgvrpykc~~c~ka-------ftqrcsleshl~kvhgv~~  201 (267)
T KOG3576|consen  133 LNRHLKCHSD-VKRHLCTFCGKGFNDTFDLKRHTRTHTGVRPYKCSLCEKA-------FTQRCSLESHLKKVHGVQH  201 (267)
T ss_pred             HHHHhhhccH-HHHHHHhhccCcccchhhhhhhhccccCccccchhhhhHH-------HHhhccHHHHHHHHcCchH
Confidence            3445555544 5679999999999999999999999999999999966666       9999999999875776443

>PHA00733 hypothetical protein

Probab=98.65  E-value=2e-08  Score=71.27  Aligned_cols=72  Identities=13%  Similarity=0.118  Sum_probs=51.1

Q ss_pred             CcceeccccccccCChhHHHHH--HH---hhcCCCCCCCCCCCCCCCCCCccCCCCChhhhccccccCCCCCCCCCCCCc
Q 044013           23 GRSYECVFCKRGFTTAQALGGH--MN---IHRKDRAKNRPPSSSSISDKLTFFPSPSTWDDHQRSVHTNNNNHSNYDSYG   97 (153)
Q Consensus        23 ekp~~C~~Cgk~F~~~~~L~~H--~r---~H~gekp~~C~~c~~~~Cgk~~~F~~~~~L~~H~~~~Ht~~kp~~~~~~~~   97 (153)
                      .+++.|.+|.+.|..+..|..+  ++   .+.+.+||.|+.|++.       |.....|..|++ +|  ..+| .|..|+
T Consensus        38 ~~~~~~~~~~~~~~~~~~l~~~~~l~~~~~~~~~kPy~C~~Cgk~-------Fss~s~L~~H~r-~h--~~~~-~C~~Cg  106 (128)
T PHA00733         38 QKRLIRAVVKTLIYNPQLLDESSYLYKLLTSKAVSPYVCPLCLMP-------FSSSVSLKQHIR-YT--EHSK-VCPVCG  106 (128)
T ss_pred             hhhHHHHHHhhhccChhhhcchHHHHhhcccCCCCCccCCCCCCc-------CCCHHHHHHHHh-cC--CcCc-cCCCCC
Confidence            4678888888888877766655  21   2234778888855555       888888888888 66  3466 788888


Q ss_pred             cccccCCc
Q 044013           98 QNYHQHLN  105 (153)
Q Consensus        98 ~~f~~~~~  105 (153)
                      +.|.....
T Consensus       107 K~F~~~~s  114 (128)
T PHA00733        107 KEFRNTDS  114 (128)
T ss_pred             CccCCHHH
Confidence            88865554

>KOG3608 consensus Zn finger proteins [General function prediction only]

Probab=98.62  E-value=4.1e-09  Score=85.03  Aligned_cols=104  Identities=13%  Similarity=0.200  Sum_probs=84.1

Q ss_pred             CCCCCcccccCCCCcceeccccccccCChhHHHHHHHhhcCCCCCCCCC--CCCCCCCCCccCCCCChhhhccccccCCC
Q 044013           10 SKSSSDDETDAGTGRSYECVFCKRGFTTAQALGGHMNIHRKDRAKNRPP--SSSSISDKLTFFPSPSTWDDHQRSVHTNN   87 (153)
Q Consensus        10 ~~~~~h~~~~~~gekp~~C~~Cgk~F~~~~~L~~H~r~H~gekp~~C~~--c~~~~Cgk~~~F~~~~~L~~H~~~~Ht~~   87 (153)
                      +.|..|++.+++..|||+|+.|.+.|.+.+.|..|..+|+ +..|.|..  |..+       |.+..++.+|++.+|.|.
T Consensus       277 ssL~~H~r~rHs~dkpfKCd~Cd~~c~~esdL~kH~~~HS-~~~y~C~h~~C~~s-------~r~~~q~~~H~~evhEg~  348 (467)
T KOG3608|consen  277 SSLTTHIRYRHSKDKPFKCDECDTRCVRESDLAKHVQVHS-KTVYQCEHPDCHYS-------VRTYTQMRRHFLEVHEGN  348 (467)
T ss_pred             HHHHHHHHhhhccCCCccccchhhhhccHHHHHHHHHhcc-ccceecCCCCCcHH-------HHHHHHHHHHHHHhccCC
Confidence            4467788888888999999999999999999999999999 77899986  5555       899999999998788777


Q ss_pred             CC--CCCCCCCccccccCCcccchhhhc-CCCCcccCCC
Q 044013           88 NN--HSNYDSYGQNYHQHLNMIGDEIWR-GNRSLRVGPS  123 (153)
Q Consensus        88 kp--~~~~~~~~~~f~~~~~~~~~~~~~-~~~sl~~~~~  123 (153)
                      .|  | .|-.|.|.|.++.+ +..++.. ..+.+-.|-.
T Consensus       349 np~~Y-~CH~Cdr~ft~G~~-L~~HL~kkH~f~~PsGh~  385 (467)
T KOG3608|consen  349 NPILY-ACHCCDRFFTSGKS-LSAHLMKKHGFRLPSGHK  385 (467)
T ss_pred             CCCce-eeecchhhhccchh-HHHHHHHhhcccCCCCCC
Confidence            65  6 78999999987777 6665444 4555555543

>PHA00733 hypothetical protein

Probab=98.52  E-value=2.9e-08  Score=70.43  Aligned_cols=52  Identities=21%  Similarity=0.379  Sum_probs=45.9

Q ss_pred             CCCcceeccccccccCChhHHHHHHHhhcCCCCCCCCCCCCCCCCCCccCCCCChhhhccc
Q 044013           21 GTGRSYECVFCKRGFTTAQALGGHMNIHRKDRAKNRPPSSSSISDKLTFFPSPSTWDDHQR   81 (153)
Q Consensus        21 ~gekp~~C~~Cgk~F~~~~~L~~H~r~H~gekp~~C~~c~~~~Cgk~~~F~~~~~L~~H~~   81 (153)
                      ++.+||.|+.|++.|.....|..|+++|  +.+|.|+.|++.       |.....|..|+.
T Consensus        69 ~~~kPy~C~~Cgk~Fss~s~L~~H~r~h--~~~~~C~~CgK~-------F~~~~sL~~H~~  120 (128)
T PHA00733         69 KAVSPYVCPLCLMPFSSSVSLKQHIRYT--EHSKVCPVCGKE-------FRNTDSTLDHVC  120 (128)
T ss_pred             CCCCCccCCCCCCcCCCHHHHHHHHhcC--CcCccCCCCCCc-------cCCHHHHHHHHH
Confidence            3478999999999999999999999987  468999955555       999999999987

>PHA00616 hypothetical protein

Probab=98.50  E-value=4.8e-08  Score=56.31  Aligned_cols=33  Identities=18%  Similarity=0.303  Sum_probs=31.1

Q ss_pred             ceeccccccccCChhHHHHHHHhhcCCCCCCCC
Q 044013           25 SYECVFCKRGFTTAQALGGHMNIHRKDRAKNRP   57 (153)
Q Consensus        25 p~~C~~Cgk~F~~~~~L~~H~r~H~gekp~~C~   57 (153)
                      ||+|..||+.|...+.|..|++.|+|++|+.|+
T Consensus         1 pYqC~~CG~~F~~~s~l~~H~r~~hg~~~~~~~   33 (44)
T PHA00616          1 MYQCLRCGGIFRKKKEVIEHLLSVHKQNKLTLE   33 (44)
T ss_pred             CCccchhhHHHhhHHHHHHHHHHhcCCCcccee
Confidence            789999999999999999999999999999886

>PF13465 zf-H2C2_2: Zinc-finger double domain; PDB: 2EN7_A 1TF6_A 1TF3_A 2ELT_A 2EOS_A 2EN2_A 2DMD_A 2WBS_A 2WBU_A 2EM5_A

Probab=98.50  E-value=2.7e-08  Score=51.37  Aligned_cols=23  Identities=26%  Similarity=0.377  Sum_probs=18.2

Q ss_pred             HHHHHHHhhcCCCCCCCCCCCCC
Q 044013           40 ALGGHMNIHRKDRAKNRPPSSSS   62 (153)
Q Consensus        40 ~L~~H~r~H~gekp~~C~~c~~~   62 (153)
                      +|..|+++|++++||.|+.|++.
T Consensus         1 ~l~~H~~~H~~~k~~~C~~C~k~   23 (26)
T PF13465_consen    1 NLRRHMRTHTGEKPYKCPYCGKS   23 (26)
T ss_dssp             HHHHHHHHHSSSSSEEESSSSEE
T ss_pred             CHHHHhhhcCCCCCCCCCCCcCe
Confidence            47888888888888888855555

...

>PHA02768 hypothetical protein; Provisional

Probab=98.40  E-value=1.1e-07  Score=57.48  Aligned_cols=42  Identities=12%  Similarity=0.074  Sum_probs=35.0

Q ss_pred             CCCCCCCCCCCCCCCccCCCCChhhhccccccCCCCCCCCCCCCccccccCCc
Q 044013           53 AKNRPPSSSSISDKLTFFPSPSTWDDHQRSVHTNNNNHSNYDSYGQNYHQHLN  105 (153)
Q Consensus        53 p~~C~~c~~~~Cgk~~~F~~~~~L~~H~~~~Ht~~kp~~~~~~~~~~f~~~~~  105 (153)
                      .|.|+.|++.       |+..++|..|++ +|+  +|| .|..|++.|++...
T Consensus         5 ~y~C~~CGK~-------Fs~~~~L~~H~r-~H~--k~~-kc~~C~k~f~~~s~   46 (55)
T PHA02768          5 GYECPICGEI-------YIKRKSMITHLR-KHN--TNL-KLSNCKRISLRTGE   46 (55)
T ss_pred             ccCcchhCCe-------eccHHHHHHHHH-hcC--Ccc-cCCcccceecccce
Confidence            4789955555       999999999999 999  688 78999999976544

>PHA00732 hypothetical protein

Probab=98.26  E-value=7.2e-07  Score=58.11  Aligned_cols=44  Identities=23%  Similarity=0.348  Sum_probs=36.5

Q ss_pred             ceeccccccccCChhHHHHHHH-hhcCCCCCCCCCCCCCCCCCCccCCCCChhhhccc
Q 044013           25 SYECVFCKRGFTTAQALGGHMN-IHRKDRAKNRPPSSSSISDKLTFFPSPSTWDDHQR   81 (153)
Q Consensus        25 p~~C~~Cgk~F~~~~~L~~H~r-~H~gekp~~C~~c~~~~Cgk~~~F~~~~~L~~H~~   81 (153)
                      ||.|..|++.|.....|..|++ .|+   ++.|+.|++.       |.   .|..|+.
T Consensus         1 py~C~~Cgk~F~s~s~Lk~H~r~~H~---~~~C~~CgKs-------F~---~l~~H~~   45 (79)
T PHA00732          1 MFKCPICGFTTVTLFALKQHARRNHT---LTKCPVCNKS-------YR---RLNQHFY   45 (79)
T ss_pred             CccCCCCCCccCCHHHHHHHhhcccC---CCccCCCCCE-------eC---Chhhhhc
Confidence            6899999999999999999998 466   4679966666       87   5888876

>PLN03086 PRLI-interacting factor K; Provisional

Probab=98.26  E-value=9.5e-07  Score=76.07  Aligned_cols=67  Identities=13%  Similarity=0.191  Sum_probs=55.7

Q ss_pred             CcceeccccccccCChhHHHHHHHhhcCCCCCCCCCCCCCCCCCCccCCCCChhhhccccccCCCCCCCCCCCCcccccc
Q 044013           23 GRSYECVFCKRGFTTAQALGGHMNIHRKDRAKNRPPSSSSISDKLTFFPSPSTWDDHQRSVHTNNNNHSNYDSYGQNYHQ  102 (153)
Q Consensus        23 ekp~~C~~Cgk~F~~~~~L~~H~r~H~gekp~~C~~c~~~~Cgk~~~F~~~~~L~~H~~~~Ht~~kp~~~~~~~~~~f~~  102 (153)
                      ++++.|+.|++.|. ...|..|+.+|+  +|+.|+ |+..       + ....|..|+. +|..++|+ .|.+|+..|.+
T Consensus       451 ~~H~~C~~Cgk~f~-~s~LekH~~~~H--kpv~Cp-Cg~~-------~-~R~~L~~H~~-thCp~Kpi-~C~fC~~~v~~  516 (567)
T PLN03086        451 KNHVHCEKCGQAFQ-QGEMEKHMKVFH--EPLQCP-CGVV-------L-EKEQMVQHQA-STCPLRLI-TCRFCGDMVQA  516 (567)
T ss_pred             ccCccCCCCCCccc-hHHHHHHHHhcC--CCccCC-CCCC-------c-chhHHHhhhh-ccCCCCce-eCCCCCCcccc
Confidence            45678999999996 577999999985  899998 7754       6 5578999998 99999999 79999999854


Q ss_pred             C
Q 044013          103 H  103 (153)
Q Consensus       103 ~  103 (153)
                      +
T Consensus       517 g  517 (567)
T PLN03086        517 G  517 (567)
T ss_pred             C
Confidence            3

>KOG3608 consensus Zn finger proteins [General function prediction only]

Probab=98.13  E-value=3.8e-07  Score=73.85  Aligned_cols=68  Identities=22%  Similarity=0.369  Sum_probs=49.6

Q ss_pred             cceeccccccccCChhHHHHHHHhhcCCCCCCCCCCCCCCCCCCccCCCCChhhhccccccCCCCCCCCCCCCccccc
Q 044013           24 RSYECVFCKRGFTTAQALGGHMNIHRKDRAKNRPPSSSSISDKLTFFPSPSTWDDHQRSVHTNNNNHSNYDSYGQNYH  101 (153)
Q Consensus        24 kp~~C~~Cgk~F~~~~~L~~H~r~H~gekp~~C~~c~~~~Cgk~~~F~~~~~L~~H~~~~Ht~~kp~~~~~~~~~~f~  101 (153)
                      .+|.|..|.|.|.+...|..|++.|.  .-|+|+.|...       .+..++|..|++..|...||| .|+.|...|-
T Consensus       236 n~fqC~~C~KrFaTeklL~~Hv~rHv--n~ykCplCdmt-------c~~~ssL~~H~r~rHs~dkpf-KCd~Cd~~c~  303 (467)
T KOG3608|consen  236 NSFQCAQCFKRFATEKLLKSHVVRHV--NCYKCPLCDMT-------CSSASSLTTHIRYRHSKDKPF-KCDECDTRCV  303 (467)
T ss_pred             CchHHHHHHHHHhHHHHHHHHHHHhh--hcccccccccC-------CCChHHHHHHHHhhhccCCCc-cccchhhhhc
Confidence            46666666666666666666666654  25677766666       788888888888568888888 7888888873

>PLN03086 PRLI-interacting factor K; Provisional

Probab=98.10  E-value=1e-06  Score=75.86  Aligned_cols=74  Identities=11%  Similarity=0.113  Sum_probs=59.1

Q ss_pred             CCCcccccCCCCcceeccccccccCChhHHHHHHHhhcCCCCCCCCCCCCCCCCCCccCCC----------CChhhhccc
Q 044013           12 SSSDDETDAGTGRSYECVFCKRGFTTAQALGGHMNIHRKDRAKNRPPSSSSISDKLTFFPS----------PSTWDDHQR   81 (153)
Q Consensus        12 ~~~h~~~~~~gekp~~C~~Cgk~F~~~~~L~~H~r~H~gekp~~C~~c~~~~Cgk~~~F~~----------~~~L~~H~~   81 (153)
                      |..|++..+   +|+.|+ ||+.+ ....|..|+++|...+|+.|+.|+..       |..          ...|..|..
T Consensus       468 LekH~~~~H---kpv~Cp-Cg~~~-~R~~L~~H~~thCp~Kpi~C~fC~~~-------v~~g~~~~d~~d~~s~Lt~HE~  535 (567)
T PLN03086        468 MEKHMKVFH---EPLQCP-CGVVL-EKEQMVQHQASTCPLRLITCRFCGDM-------VQAGGSAMDVRDRLRGMSEHES  535 (567)
T ss_pred             HHHHHHhcC---CCccCC-CCCCc-chhHHHhhhhccCCCCceeCCCCCCc-------cccCccccchhhhhhhHHHHHH
Confidence            445555542   789999 99765 66899999999999999999966666       742          347999998


Q ss_pred             cccCCCCCCCCCCCCcccc
Q 044013           82 SVHTNNNNHSNYDSYGQNY  100 (153)
Q Consensus        82 ~~Ht~~kp~~~~~~~~~~f  100 (153)
                       +. |.+++ .|..|++.+
T Consensus       536 -~C-G~rt~-~C~~Cgk~V  551 (567)
T PLN03086        536 -IC-GSRTA-PCDSCGRSV  551 (567)
T ss_pred             -hc-CCcce-EccccCCee
Confidence             64 88998 789999997

>PF13465 zf-H2C2_2: Zinc-finger double domain; PDB: 2EN7_A 1TF6_A 1TF3_A 2ELT_A 2EOS_A 2EN2_A 2DMD_A 2WBS_A 2WBU_A 2EM5_A

Probab=98.09  E-value=5.5e-07  Score=46.36  Aligned_cols=25  Identities=20%  Similarity=0.368  Sum_probs=23.0

Q ss_pred             hhhhccccccCCCCCCCCCCCCccccc
Q 044013           75 TWDDHQRSVHTNNNNHSNYDSYGQNYH  101 (153)
Q Consensus        75 ~L~~H~~~~Ht~~kp~~~~~~~~~~f~  101 (153)
                      +|..|++ +|++++|| .|..|+++|.
T Consensus         1 ~l~~H~~-~H~~~k~~-~C~~C~k~F~   25 (26)
T PF13465_consen    1 NLRRHMR-THTGEKPY-KCPYCGKSFS   25 (26)
T ss_dssp             HHHHHHH-HHSSSSSE-EESSSSEEES
T ss_pred             CHHHHhh-hcCCCCCC-CCCCCcCeeC
Confidence            5889999 99999999 8999999984

...

>PF00096 zf-C2H2: Zinc finger, C2H2 type; InterPro: IPR007087 Zinc finger (Znf) domains are relatively small protein motifs which contain multiple finger-like protrusions that make tandem contacts with their target molecule

Probab=98.02  E-value=4.2e-06  Score=41.44  Aligned_cols=23  Identities=35%  Similarity=0.852  Sum_probs=21.4

Q ss_pred             eeccccccccCChhHHHHHHHhh
Q 044013           26 YECVFCKRGFTTAQALGGHMNIH   48 (153)
Q Consensus        26 ~~C~~Cgk~F~~~~~L~~H~r~H   48 (153)
                      |.|++|++.|..+..|..|++.|
T Consensus         1 y~C~~C~~~f~~~~~l~~H~~~H   23 (23)
T PF00096_consen    1 YKCPICGKSFSSKSNLKRHMRRH   23 (23)
T ss_dssp             EEETTTTEEESSHHHHHHHHHHH
T ss_pred             CCCCCCCCccCCHHHHHHHHhHC
Confidence            78999999999999999999875

Some of these domains bind zinc, but many do not; instead binding other metals such as iron, or no metal at all. For example, some family members form salt bridges to stabilise the finger-like folds. They were first identified as a DNA-binding motif in transcription factor TFIIIA from Xenopus laevis (African clawed frog), however they are now recognised to bind DNA, RNA, protein and/or lipid substrates [, , , , ]. Their binding properties depend on the amino acid sequence of the finger domains and of the linker between fingers, as well as on the higher-order structures and the number of fingers. Znf domains are often found in clusters, where fingers can have different binding specificities. There are many superfamilies of Znf motifs, varying in both sequence and structure. They display considerable versatility in binding modes, even between members of the same class (e.g. some bind DNA, others protein), suggesting that Znf motifs are stable scaffolds that have evolved specialised functions. For example, Znf-containing proteins function in gene transcription, translation, mRNA trafficking, cytoskeleton organisation, epithelial development, cell adhesion, protein folding, chromatin remodelling and zinc sensing, to name but a few []. Zinc-binding motifs are stable structures, and they rarely undergo conformational changes upon binding their target. The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger: #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C], where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter []. This entry represents the classical C2H2 zinc finger domain. More information about these proteins can be found at Protein of the Month: Zinc Fingers [].; GO: 0008270 zinc ion binding, 0005622 intracellular; PDB: 2D9H_A 2EPC_A 1SP1_A 1VA3_A 2WBT_B 2ELR_A 2YTP_A 2YTT_A 1VA1_A 2ELO_A ....

>PF13912 zf-C2H2_6: C2H2-type zinc finger; PDB: 1JN7_A 1FU9_A 2L1O_A 1NJQ_A 2EN8_A 2EMM_A 1FV5_A 1Y0J_B 2L6Z_B

Probab=97.63  E-value=3.8e-05  Score=39.41  Aligned_cols=25  Identities=32%  Similarity=0.618  Sum_probs=23.0

Q ss_pred             ceeccccccccCChhHHHHHHHhhc
Q 044013           25 SYECVFCKRGFTTAQALGGHMNIHR   49 (153)
Q Consensus        25 p~~C~~Cgk~F~~~~~L~~H~r~H~   49 (153)
                      ||+|..|++.|.+...|..|++.|.
T Consensus         1 ~~~C~~C~~~F~~~~~l~~H~~~h~   25 (27)
T PF13912_consen    1 PFECDECGKTFSSLSALREHKRSHC   25 (27)
T ss_dssp             SEEETTTTEEESSHHHHHHHHCTTT
T ss_pred             CCCCCccCCccCChhHHHHHhHHhc
Confidence            6899999999999999999998775

>COG5189 SFP1 Putative transcriptional repressor regulating G2/M transition [Transcription / Cell division and chromosome partitioning]

Probab=97.59  E-value=3e-05  Score=62.23  Aligned_cols=52  Identities=21%  Similarity=0.459  Sum_probs=39.8

Q ss_pred             Ccceeccc--cccccCChhHHHHHHH-hh------------------cCCCCCCCCCCCCCCCCCCccCCCCChhhhccc
Q 044013           23 GRSYECVF--CKRGFTTAQALGGHMN-IH------------------RKDRAKNRPPSSSSISDKLTFFPSPSTWDDHQR   81 (153)
Q Consensus        23 ekp~~C~~--Cgk~F~~~~~L~~H~r-~H------------------~gekp~~C~~c~~~~Cgk~~~F~~~~~L~~H~~   81 (153)
                      +|||+|++  |.|.|++...|+-|+. -|                  ...|||+|++|++.       |....-|+.|..
T Consensus       347 ~KpykCpV~gC~K~YknqnGLKYH~lhGH~~~~~~~~p~p~~~~~F~~~~KPYrCevC~KR-------YKNlNGLKYHr~  419 (423)
T COG5189         347 GKPYKCPVEGCNKKYKNQNGLKYHMLHGHQNQKLHENPSPEKMNIFSAKDKPYRCEVCDKR-------YKNLNGLKYHRK  419 (423)
T ss_pred             CceecCCCCCchhhhccccchhhhhhccccCcccCCCCCccccccccccCCceeccccchh-------hccCccceeccc
Confidence            59999997  9999999999999975 23                  12378888866666       777777777754

>PF13894 zf-C2H2_4: C2H2-type zinc finger; PDB: 2ELX_A 2EPP_A 2DLK_A 1X6H_A 2EOU_A 2EMB_A 2GQJ_A 2CSH_A 2WBT_B 2ELM_A

Probab=97.52  E-value=8e-05  Score=36.58  Aligned_cols=23  Identities=30%  Similarity=0.827  Sum_probs=19.2

Q ss_pred             eeccccccccCChhHHHHHHHhh
Q 044013           26 YECVFCKRGFTTAQALGGHMNIH   48 (153)
Q Consensus        26 ~~C~~Cgk~F~~~~~L~~H~r~H   48 (153)
                      |.|++|++.|.+...|..|+++|
T Consensus         1 ~~C~~C~~~~~~~~~l~~H~~~~   23 (24)
T PF13894_consen    1 FQCPICGKSFRSKSELRQHMRTH   23 (24)
T ss_dssp             EE-SSTS-EESSHHHHHHHHHHH
T ss_pred             CCCcCCCCcCCcHHHHHHHHHhh
Confidence            78999999999999999999876

...

>PF05605 zf-Di19: Drought induced 19 protein (Di19), zinc-binding; InterPro: IPR008598 This entry consists of several drought induced 19 (Di19) like and RING finger 114 proteins

Probab=97.48  E-value=0.0001  Score=44.39  Aligned_cols=47  Identities=26%  Similarity=0.467  Sum_probs=36.2

Q ss_pred             ceeccccccccCChhHHHHHHH-hhcCC-CCCCCCCCCCCCCCCCccCCCCChhhhccc
Q 044013           25 SYECVFCKRGFTTAQALGGHMN-IHRKD-RAKNRPPSSSSISDKLTFFPSPSTWDDHQR   81 (153)
Q Consensus        25 p~~C~~Cgk~F~~~~~L~~H~r-~H~ge-kp~~C~~c~~~~Cgk~~~F~~~~~L~~H~~   81 (153)
                      .|.|++|++. .....|..|.. .|..+ +.+.||.|...       +..  +|..|+.
T Consensus         2 ~f~CP~C~~~-~~~~~L~~H~~~~H~~~~~~v~CPiC~~~-------~~~--~l~~Hl~   50 (54)
T PF05605_consen    2 SFTCPYCGKG-FSESSLVEHCEDEHRSESKNVVCPICSSR-------VTD--NLIRHLN   50 (54)
T ss_pred             CcCCCCCCCc-cCHHHHHHHHHhHCcCCCCCccCCCchhh-------hhh--HHHHHHH
Confidence            4899999994 55788999977 46654 57999977655       553  8999987

Di19 has been found to be strongly expressed in both the roots and leaves of Arabidopsis thaliana during progressive drought [], whilst RING finger proteins are thought to play a role in spermatogenesis. The precise function is unknown.

>PHA00616 hypothetical protein

Probab=97.47  E-value=1.1e-05  Score=46.46  Aligned_cols=34  Identities=9%  Similarity=-0.018  Sum_probs=28.7

Q ss_pred             CCCCCCCCCCCCCCCccCCCCChhhhccccccCCCCCCCCCCC
Q 044013           53 AKNRPPSSSSISDKLTFFPSPSTWDDHQRSVHTNNNNHSNYDS   95 (153)
Q Consensus        53 p~~C~~c~~~~Cgk~~~F~~~~~L~~H~~~~Ht~~kp~~~~~~   95 (153)
                      ||+|+.||+.       |...++|..|++ .|+|++|+ .++.
T Consensus         1 pYqC~~CG~~-------F~~~s~l~~H~r-~~hg~~~~-~~~~   34 (44)
T PHA00616          1 MYQCLRCGGI-------FRKKKEVIEHLL-SVHKQNKL-TLEY   34 (44)
T ss_pred             CCccchhhHH-------HhhHHHHHHHHH-HhcCCCcc-ceeE
Confidence            7899955555       999999999999 99999998 5543

>KOG3993 consensus Transcription factor (contains Zn finger) [Transcription]

Probab=97.25  E-value=3.7e-05  Score=63.67  Aligned_cols=70  Identities=20%  Similarity=0.249  Sum_probs=51.3

Q ss_pred             CCCCCCCCcccccCCCCcceeccccccccCChhHHHHHHHhhc--------CCCC-------------------------
Q 044013            7 EDYSKSSSDDETDAGTGRSYECVFCKRGFTTAQALGGHMNIHR--------KDRA-------------------------   53 (153)
Q Consensus         7 ~~~~~~~~h~~~~~~gekp~~C~~Cgk~F~~~~~L~~H~r~H~--------gekp-------------------------   53 (153)
                      +|.+.|..|.=.++- .--|+|+.|+|.|+-+.+|..|.|-|.        +..|                         
T Consensus       278 eD~F~LAQHrC~RIV-~vEYrCPEC~KVFsCPANLASHRRWHKPR~eaa~a~~~P~k~~~~~rae~~ea~rsg~dss~gi  356 (500)
T KOG3993|consen  278 EDAFALAQHRCPRIV-HVEYRCPECDKVFSCPANLASHRRWHKPRPEAAKAGSPPPKQAVETRAEVQEAERSGDDSSSGI  356 (500)
T ss_pred             hhHHHHhhccCCeeE-EeeecCCcccccccCchhhhhhhcccCCchhhhhcCCCChhhhhhhhhhhhhccccCCcccCce
Confidence            355677777655554 335999999999999999999999873        2222                         


Q ss_pred             CCCCCCCCCCCCCCccCCCCChhhhccccccC
Q 044013           54 KNRPPSSSSISDKLTFFPSPSTWDDHQRSVHT   85 (153)
Q Consensus        54 ~~C~~c~~~~Cgk~~~F~~~~~L~~H~~~~Ht   85 (153)
                      |.|.     +|+|.  |.+...|+.|+. +|.
T Consensus       357 ~~C~-----~C~Kk--FrRqAYLrKHql-thq  380 (500)
T KOG3993|consen  357 FSCH-----TCGKK--FRRQAYLRKHQL-THQ  380 (500)
T ss_pred             eecH-----Hhhhh--hHHHHHHHHhHH-hhh
Confidence            5566     55555  999999999987 543

>PF09237 GAGA: GAGA factor; InterPro: IPR015318 Zinc finger (Znf) domains are relatively small protein motifs which contain multiple finger-like protrusions that make tandem contacts with their target molecule

Probab=97.18  E-value=0.00054  Score=40.60  Aligned_cols=37  Identities=14%  Similarity=0.371  Sum_probs=26.0

Q ss_pred             cccCCCCcceeccccccccCChhHHHHHHHhhcCCCC
Q 044013           17 ETDAGTGRSYECVFCKRGFTTAQALGGHMNIHRKDRA   53 (153)
Q Consensus        17 ~~~~~gekp~~C~~Cgk~F~~~~~L~~H~r~H~gekp   53 (153)
                      +.+...+.|..|++|+..++...+|++|+.++.+.||
T Consensus        16 k~~~~S~~PatCP~C~a~~~~srnLrRHle~~H~~k~   52 (54)
T PF09237_consen   16 KSKSQSEQPATCPICGAVIRQSRNLRRHLEIRHFKKP   52 (54)
T ss_dssp             CCCCTTS--EE-TTT--EESSHHHHHHHHHHHTTTS-
T ss_pred             HHhhccCCCCCCCcchhhccchhhHHHHHHHHhcccC
Confidence            3445557899999999999999999999998888776

Some of these domains bind zinc, but many do not; instead binding other metals such as iron, or no metal at all. For example, some family members form salt bridges to stabilise the finger-like folds. They were first identified as a DNA-binding motif in transcription factor TFIIIA from Xenopus laevis (African clawed frog), however they are now recognised to bind DNA, RNA, protein and/or lipid substrates [, , , , ]. Their binding properties depend on the amino acid sequence of the finger domains and of the linker between fingers, as well as on the higher-order structures and the number of fingers. Znf domains are often found in clusters, where fingers can have different binding specificities. There are many superfamilies of Znf motifs, varying in both sequence and structure. They display considerable versatility in binding modes, even between members of the same class (e.g. some bind DNA, others protein), suggesting that Znf motifs are stable scaffolds that have evolved specialised functions. For example, Znf-containing proteins function in gene transcription, translation, mRNA trafficking, cytoskeleton organisation, epithelial development, cell adhesion, protein folding, chromatin remodelling and zinc sensing, to name but a few []. Zinc-binding motifs are stable structures, and they rarely undergo conformational changes upon binding their target. Members of this entry bind to a 5'-GAGAG-3' DNA consensus binding site, and contain a Cys2-His2 zinc finger core as well as an N-terminal extension containing two highly basic regions. The zinc finger core binds in the DNA major groove and recognises the first three GAG bases of the consensus in a manner similar to that seen in other classical zinc finger-DNA complexes. The second basic region forms a helix that interacts in the major groove recognising the last G of the consensus, while the first basic region wraps around the DNA in the minor groove and recognises the A in the fourth position of the consensus sequence []. More information about these proteins can be found at Protein of the Month: Zinc Fingers [].; PDB: 1YUI_A 1YUJ_A.

>smart00355 ZnF_C2H2 zinc finger

Probab=97.11  E-value=0.00041  Score=34.36  Aligned_cols=24  Identities=38%  Similarity=0.728  Sum_probs=20.4

Q ss_pred             eeccccccccCChhHHHHHHHhhc
Q 044013           26 YECVFCKRGFTTAQALGGHMNIHR   49 (153)
Q Consensus        26 ~~C~~Cgk~F~~~~~L~~H~r~H~   49 (153)
                      |.|..|++.|.....|..|+++|.
T Consensus         1 ~~C~~C~~~f~~~~~l~~H~~~H~   24 (26)
T smart00355        1 YRCPECGKVFKSKSALKEHMRTHX   24 (26)
T ss_pred             CCCCCCcchhCCHHHHHHHHHHhc
Confidence            578889999999999999988765

>PHA00732 hypothetical protein

Probab=97.03  E-value=0.00042  Score=45.08  Aligned_cols=39  Identities=15%  Similarity=0.144  Sum_probs=31.0

Q ss_pred             CCCCCCCCCCCCCCCccCCCCChhhhccccccCCCCCCCCCCCCcccccc
Q 044013           53 AKNRPPSSSSISDKLTFFPSPSTWDDHQRSVHTNNNNHSNYDSYGQNYHQ  102 (153)
Q Consensus        53 p~~C~~c~~~~Cgk~~~F~~~~~L~~H~~~~Ht~~kp~~~~~~~~~~f~~  102 (153)
                      ||.|..|++.       |.+..+|..|++..|++   + .|..|+++|.+
T Consensus         1 py~C~~Cgk~-------F~s~s~Lk~H~r~~H~~---~-~C~~CgKsF~~   39 (79)
T PHA00732          1 MFKCPICGFT-------TVTLFALKQHARRNHTL---T-KCPVCNKSYRR   39 (79)
T ss_pred             CccCCCCCCc-------cCCHHHHHHHhhcccCC---C-ccCCCCCEeCC
Confidence            6889966555       99999999999723654   4 69999999953

>PRK04860 hypothetical protein; Provisional

Probab=97.00  E-value=0.00039  Score=51.11  Aligned_cols=36  Identities=14%  Similarity=0.309  Sum_probs=30.3

Q ss_pred             CcceeccccccccCChhHHHHHHHhhcCCCCCCCCCCCCC
Q 044013           23 GRSYECVFCKRGFTTAQALGGHMNIHRKDRAKNRPPSSSS   62 (153)
Q Consensus        23 ekp~~C~~Cgk~F~~~~~L~~H~r~H~gekp~~C~~c~~~   62 (153)
                      .-+|.|. |++   ....+.+|.++|+++++|.|..|+..
T Consensus       117 ~~~Y~C~-C~~---~~~~~rrH~ri~~g~~~YrC~~C~~~  152 (160)
T PRK04860        117 TFPYRCK-CQE---HQLTVRRHNRVVRGEAVYRCRRCGET  152 (160)
T ss_pred             EEEEEcC-CCC---eeCHHHHHHHHhcCCccEECCCCCce
Confidence            3579998 987   56678999999999999999966665

>PF12874 zf-met: Zinc-finger of C2H2 type; PDB: 1ZU1_A 2KVG_A

Probab=96.66  E-value=0.0013  Score=32.91  Aligned_cols=23  Identities=22%  Similarity=0.712  Sum_probs=20.9

Q ss_pred             eeccccccccCChhHHHHHHHhh
Q 044013           26 YECVFCKRGFTTAQALGGHMNIH   48 (153)
Q Consensus        26 ~~C~~Cgk~F~~~~~L~~H~r~H   48 (153)
                      |.|.+|++.|.....|..|++.+
T Consensus         1 ~~C~~C~~~f~s~~~~~~H~~s~   23 (25)
T PF12874_consen    1 FYCDICNKSFSSENSLRQHLRSK   23 (25)
T ss_dssp             EEETTTTEEESSHHHHHHHHTTH
T ss_pred             CCCCCCCCCcCCHHHHHHHHCcC
Confidence            68999999999999999999865

>PF00096 zf-C2H2: Zinc finger, C2H2 type; InterPro: IPR007087 Zinc finger (Znf) domains are relatively small protein motifs which contain multiple finger-like protrusions that make tandem contacts with their target molecule

Probab=95.87  E-value=0.00043  Score=33.96  Aligned_cols=23  Identities=35%  Similarity=0.424  Sum_probs=17.8

Q ss_pred             CCCCCCCCCCCCCCccCCCCChhhhcccccc
Q 044013           54 KNRPPSSSSISDKLTFFPSPSTWDDHQRSVH   84 (153)
Q Consensus        54 ~~C~~c~~~~Cgk~~~F~~~~~L~~H~~~~H   84 (153)
                      |.|+.|++.       |.....|..|++ .|
T Consensus         1 y~C~~C~~~-------f~~~~~l~~H~~-~H   23 (23)
T PF00096_consen    1 YKCPICGKS-------FSSKSNLKRHMR-RH   23 (23)
T ss_dssp             EEETTTTEE-------ESSHHHHHHHHH-HH
T ss_pred             CCCCCCCCc-------cCCHHHHHHHHh-HC
Confidence            468855555       999999999997 44

Some of these domains bind zinc, but many do not; instead binding other metals such as iron, or no metal at all. For example, some family members form salt bridges to stabilise the finger-like folds. They were first identified as a DNA-binding motif in transcription factor TFIIIA from Xenopus laevis (African clawed frog), however they are now recognised to bind DNA, RNA, protein and/or lipid substrates [, , , , ]. Their binding properties depend on the amino acid sequence of the finger domains and of the linker between fingers, as well as on the higher-order structures and the number of fingers. Znf domains are often found in clusters, where fingers can have different binding specificities. There are many superfamilies of Znf motifs, varying in both sequence and structure. They display considerable versatility in binding modes, even between members of the same class (e.g. some bind DNA, others protein), suggesting that Znf motifs are stable scaffolds that have evolved specialised functions. For example, Znf-containing proteins function in gene transcription, translation, mRNA trafficking, cytoskeleton organisation, epithelial development, cell adhesion, protein folding, chromatin remodelling and zinc sensing, to name but a few []. Zinc-binding motifs are stable structures, and they rarely undergo conformational changes upon binding their target. The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger: #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C], where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter []. This entry represents the classical C2H2 zinc finger domain. More information about these proteins can be found at Protein of the Month: Zinc Fingers [].; GO: 0008270 zinc ion binding, 0005622 intracellular; PDB: 2D9H_A 2EPC_A 1SP1_A 1VA3_A 2WBT_B 2ELR_A 2YTP_A 2YTT_A 1VA1_A 2ELO_A ....

>COG5048 FOG: Zn-finger [General function prediction only]

Probab=95.59  E-value=0.0054  Score=49.72  Aligned_cols=60  Identities=17%  Similarity=0.274  Sum_probs=54.3

Q ss_pred             cceeccccccccCChhHHHHHHH--hhcCC--CCCCCC--CCCCCCCCCCccCCCCChhhhccccccCCCCCCC
Q 044013           24 RSYECVFCKRGFTTAQALGGHMN--IHRKD--RAKNRP--PSSSSISDKLTFFPSPSTWDDHQRSVHTNNNNHS   91 (153)
Q Consensus        24 kp~~C~~Cgk~F~~~~~L~~H~r--~H~ge--kp~~C~--~c~~~~Cgk~~~F~~~~~L~~H~~~~Ht~~kp~~   91 (153)
                      .++.|..|...|.....|..|.+  .|+++  +|+.|+  .|++.       |.+...+..|.. +|++.+++.
T Consensus       288 ~~~~~~~~~~~~s~~~~l~~~~~~~~h~~~~~~~~~~p~~~~~~~-------~~~~~~~~~~~~-~~~~~~~~~  353 (467)
T COG5048         288 LPIKSKQCNISFSRSSPLTRHLRSVNHSGESLKPFSCPYSLCGKL-------FSRNDALKRHIL-LHTSISPAK  353 (467)
T ss_pred             cCCCCccccCCccccccccccccccccccccCCceeeeccCCCcc-------ccccccccCCcc-cccCCCccc
Confidence            47899999999999999999999  89999  999999  56666       999999999999 999988763

>PF12171 zf-C2H2_jaz: Zinc-finger double-stranded RNA-binding; InterPro: IPR022755 This zinc finger is found in archaea and eukaryotes, and is approximately 30 amino acids in length

Probab=95.44  E-value=0.005  Score=31.47  Aligned_cols=22  Identities=27%  Similarity=0.623  Sum_probs=18.2

Q ss_pred             eeccccccccCChhHHHHHHHh
Q 044013           26 YECVFCKRGFTTAQALGGHMNI   47 (153)
Q Consensus        26 ~~C~~Cgk~F~~~~~L~~H~r~   47 (153)
                      |.|..|++.|.+...|..|+++
T Consensus         2 ~~C~~C~k~f~~~~~~~~H~~s   23 (27)
T PF12171_consen    2 FYCDACDKYFSSENQLKQHMKS   23 (27)
T ss_dssp             CBBTTTTBBBSSHHHHHCCTTS
T ss_pred             CCcccCCCCcCCHHHHHHHHcc
Confidence            6788888888888888888764

The mammalian members of this group occur multiple times along the protein, joined by flexible linkers, and are referred to as JAZ - dsRNA-binding ZF protein - zinc-fingers. The JAZ proteins are expressed in all tissues tested and localise in the nucleus, particularly the nucleolus []. JAZ preferentially binds to double-stranded (ds) RNA or RNA/DNA hybrids rather than DNA. In addition to binding double-stranded RNA, these zinc-fingers are required for nucleolar localisation. This entry represents the multiple-adjacent-C2H2 zinc finger, JAZ. ; PDB: 4DGW_A 1ZR9_A.

>PF12756 zf-C2H2_2: C2H2 type zinc-finger (2 copies); PDB: 2DMI_A

Probab=95.33  E-value=0.0023  Score=42.14  Aligned_cols=21  Identities=33%  Similarity=0.842  Sum_probs=0.0

Q ss_pred             eccccccccCChhHHHHHHHh
Q 044013           27 ECVFCKRGFTTAQALGGHMNI   47 (153)
Q Consensus        27 ~C~~Cgk~F~~~~~L~~H~r~   47 (153)
                      +|.+|+..|.....|..|+..
T Consensus         1 ~C~~C~~~f~~~~~l~~H~~~   21 (100)
T PF12756_consen    1 QCLFCDESFSSVDDLLQHMKK   21 (100)
T ss_dssp             ---------------------
T ss_pred             Ccccccccccccccccccccc
Confidence            478888888888888888763

>PF13909 zf-H2C2_5: C2H2-type zinc-finger domain; PDB: 1X5W_A

Probab=95.13  E-value=0.02  Score=28.22  Aligned_cols=23  Identities=26%  Similarity=0.628  Sum_probs=17.6

Q ss_pred             eeccccccccCChhHHHHHHHhhc
Q 044013           26 YECVFCKRGFTTAQALGGHMNIHR   49 (153)
Q Consensus        26 ~~C~~Cgk~F~~~~~L~~H~r~H~   49 (153)
                      |+|+.|..... ...|..|++.|.
T Consensus         1 y~C~~C~y~t~-~~~l~~H~~~~H   23 (24)
T PF13909_consen    1 YKCPHCSYSTS-KSNLKRHLKRHH   23 (24)
T ss_dssp             EE-SSSS-EES-HHHHHHHHHHHH
T ss_pred             CCCCCCCCcCC-HHHHHHHHHhhC
Confidence            78999998887 889999998753

>COG5189 SFP1 Putative transcriptional repressor regulating G2/M transition [Transcription / Cell division and chromosome partitioning]

Probab=95.00  E-value=0.014  Score=47.18  Aligned_cols=45  Identities=11%  Similarity=0.178  Sum_probs=34.8

Q ss_pred             CCCCCCCCCCCCCCCCCCccCCCCChhhhccccccC------------------CCCCCCCCCCCcccc
Q 044013           50 KDRAKNRPPSSSSISDKLTFFPSPSTWDDHQRSVHT------------------NNNNHSNYDSYGQNY  100 (153)
Q Consensus        50 gekp~~C~~c~~~~Cgk~~~F~~~~~L~~H~~~~Ht------------------~~kp~~~~~~~~~~f  100 (153)
                      ++|||+|++-   .|.|+  |....-|+.|+...|.                  ..||| .|.+|++.|
T Consensus       346 d~KpykCpV~---gC~K~--YknqnGLKYH~lhGH~~~~~~~~p~p~~~~~F~~~~KPY-rCevC~KRY  408 (423)
T COG5189         346 DGKPYKCPVE---GCNKK--YKNQNGLKYHMLHGHQNQKLHENPSPEKMNIFSAKDKPY-RCEVCDKRY  408 (423)
T ss_pred             cCceecCCCC---Cchhh--hccccchhhhhhccccCcccCCCCCccccccccccCCce-eccccchhh
Confidence            4699999875   45577  9999999999863451                  12688 799999998

>PF13913 zf-C2HC_2: zinc-finger of a C2HC-type

Probab=94.90  E-value=0.021  Score=28.85  Aligned_cols=21  Identities=33%  Similarity=0.669  Sum_probs=17.3

Q ss_pred             eeccccccccCChhHHHHHHHh
Q 044013           26 YECVFCKRGFTTAQALGGHMNI   47 (153)
Q Consensus        26 ~~C~~Cgk~F~~~~~L~~H~r~   47 (153)
                      ..|++||+.| ....|..|+.+
T Consensus         3 ~~C~~CgR~F-~~~~l~~H~~~   23 (25)
T PF13913_consen    3 VPCPICGRKF-NPDRLEKHEKI   23 (25)
T ss_pred             CcCCCCCCEE-CHHHHHHHHHh
Confidence            4799999999 67889989764

>KOG3993 consensus Transcription factor (contains Zn finger) [Transcription]

Probab=94.76  E-value=0.0065  Score=50.73  Aligned_cols=53  Identities=30%  Similarity=0.502  Sum_probs=44.1

Q ss_pred             ceeccccccccCChhHHHHHHHhhcCCCCCCCCCCCCCCCCCCccCCCCChhhhccccccC
Q 044013           25 SYECVFCKRGFTTAQALGGHMNIHRKDRAKNRPPSSSSISDKLTFFPSPSTWDDHQRSVHT   85 (153)
Q Consensus        25 p~~C~~Cgk~F~~~~~L~~H~r~H~gekp~~C~~c~~~~Cgk~~~F~~~~~L~~H~~~~Ht   85 (153)
                      -|.|..|.-.|-..-.|.+|.-.-.-..-|+|+     .|+|+  |+...+|..|.| -|.
T Consensus       267 dyiCqLCK~kYeD~F~LAQHrC~RIV~vEYrCP-----EC~KV--FsCPANLASHRR-WHK  319 (500)
T KOG3993|consen  267 DYICQLCKEKYEDAFALAQHRCPRIVHVEYRCP-----ECDKV--FSCPANLASHRR-WHK  319 (500)
T ss_pred             HHHHHHHHHhhhhHHHHhhccCCeeEEeeecCC-----ccccc--ccCchhhhhhhc-ccC
Confidence            399999999999999999997654545579999     66666  999999999988 664

>PF13912 zf-C2H2_6: C2H2-type zinc finger; PDB: 1JN7_A 1FU9_A 2L1O_A 1NJQ_A 2EN8_A 2EMM_A 1FV5_A 1Y0J_B 2L6Z_B

Probab=94.62  E-value=0.0036  Score=31.80  Aligned_cols=25  Identities=24%  Similarity=0.336  Sum_probs=20.3

Q ss_pred             CCCCCCCCCCCCCCCccCCCCChhhhccccccC
Q 044013           53 AKNRPPSSSSISDKLTFFPSPSTWDDHQRSVHT   85 (153)
Q Consensus        53 p~~C~~c~~~~Cgk~~~F~~~~~L~~H~~~~Ht   85 (153)
                      ||.|..|+..       |.....|..|++ .|.
T Consensus         1 ~~~C~~C~~~-------F~~~~~l~~H~~-~h~   25 (27)
T PF13912_consen    1 PFECDECGKT-------FSSLSALREHKR-SHC   25 (27)
T ss_dssp             SEEETTTTEE-------ESSHHHHHHHHC-TTT
T ss_pred             CCCCCccCCc-------cCChhHHHHHhH-Hhc
Confidence            6788866666       999999999998 654

>smart00355 ZnF_C2H2 zinc finger

Probab=94.33  E-value=0.016  Score=28.24  Aligned_cols=24  Identities=29%  Similarity=0.391  Sum_probs=19.3

Q ss_pred             CCCCCCCCCCCCCCccCCCCChhhhccccccC
Q 044013           54 KNRPPSSSSISDKLTFFPSPSTWDDHQRSVHT   85 (153)
Q Consensus        54 ~~C~~c~~~~Cgk~~~F~~~~~L~~H~~~~Ht   85 (153)
                      |.|..|++.       |.....|..|++ .|.
T Consensus         1 ~~C~~C~~~-------f~~~~~l~~H~~-~H~   24 (26)
T smart00355        1 YRCPECGKV-------FKSKSALKEHMR-THX   24 (26)
T ss_pred             CCCCCCcch-------hCCHHHHHHHHH-Hhc
Confidence            568866655       999999999998 765

>PF13894 zf-C2H2_4: C2H2-type zinc finger; PDB: 2ELX_A 2EPP_A 2DLK_A 1X6H_A 2EOU_A 2EMB_A 2GQJ_A 2CSH_A 2WBT_B 2ELM_A

Probab=94.13  E-value=0.0042  Score=30.13  Aligned_cols=21  Identities=33%  Similarity=0.357  Sum_probs=15.6

Q ss_pred             CCCCCCCCCCCCCCccCCCCChhhhccc
Q 044013           54 KNRPPSSSSISDKLTFFPSPSTWDDHQR   81 (153)
Q Consensus        54 ~~C~~c~~~~Cgk~~~F~~~~~L~~H~~   81 (153)
                      |.|+.|+..       |.....|..|++
T Consensus         1 ~~C~~C~~~-------~~~~~~l~~H~~   21 (24)
T PF13894_consen    1 FQCPICGKS-------FRSKSELRQHMR   21 (24)
T ss_dssp             EE-SSTS-E-------ESSHHHHHHHHH
T ss_pred             CCCcCCCCc-------CCcHHHHHHHHH
Confidence            468855555       999999999997

...

>smart00451 ZnF_U1 U1-like zinc finger

Probab=93.50  E-value=0.059  Score=28.78  Aligned_cols=23  Identities=22%  Similarity=0.567  Sum_probs=19.9

Q ss_pred             ceeccccccccCChhHHHHHHHh
Q 044013           25 SYECVFCKRGFTTAQALGGHMNI   47 (153)
Q Consensus        25 p~~C~~Cgk~F~~~~~L~~H~r~   47 (153)
                      +|.|.+|++.|.....+..|+..
T Consensus         3 ~~~C~~C~~~~~~~~~~~~H~~g   25 (35)
T smart00451        3 GFYCKLCNVTFTDEISVEAHLKG   25 (35)
T ss_pred             CeEccccCCccCCHHHHHHHHCh
Confidence            58899999999988888888764

Family of C2H2-type zinc fingers, present in matrin, U1 small nuclear ribonucleoprotein C and other RNA-binding proteins.

>PF09237 GAGA: GAGA factor; InterPro: IPR015318 Zinc finger (Znf) domains are relatively small protein motifs which contain multiple finger-like protrusions that make tandem contacts with their target molecule

Probab=93.32  E-value=0.011  Score=35.02  Aligned_cols=33  Identities=6%  Similarity=0.168  Sum_probs=21.2

Q ss_pred             cCCCCCCCCCCCCCCCCCCccCCCCChhhhccccccCCCCC
Q 044013           49 RKDRAKNRPPSSSSISDKLTFFPSPSTWDDHQRSVHTNNNN   89 (153)
Q Consensus        49 ~gekp~~C~~c~~~~Cgk~~~F~~~~~L~~H~~~~Ht~~kp   89 (153)
                      ..+.|-.|+.|+     ..  +++..+|.+|+. ++.+.+|
T Consensus        20 ~S~~PatCP~C~-----a~--~~~srnLrRHle-~~H~~k~   52 (54)
T PF09237_consen   20 QSEQPATCPICG-----AV--IRQSRNLRRHLE-IRHFKKP   52 (54)
T ss_dssp             TTS--EE-TTT-------E--ESSHHHHHHHHH-HHTTTS-
T ss_pred             ccCCCCCCCcch-----hh--ccchhhHHHHHH-HHhcccC
Confidence            356788999554     44  999999999998 6666655

Some of these domains bind zinc, but many do not; instead binding other metals such as iron, or no metal at all. For example, some family members form salt bridges to stabilise the finger-like folds. They were first identified as a DNA-binding motif in transcription factor TFIIIA from Xenopus laevis (African clawed frog), however they are now recognised to bind DNA, RNA, protein and/or lipid substrates [, , , , ]. Their binding properties depend on the amino acid sequence of the finger domains and of the linker between fingers, as well as on the higher-order structures and the number of fingers. Znf domains are often found in clusters, where fingers can have different binding specificities. There are many superfamilies of Znf motifs, varying in both sequence and structure. They display considerable versatility in binding modes, even between members of the same class (e.g. some bind DNA, others protein), suggesting that Znf motifs are stable scaffolds that have evolved specialised functions. For example, Znf-containing proteins function in gene transcription, translation, mRNA trafficking, cytoskeleton organisation, epithelial development, cell adhesion, protein folding, chromatin remodelling and zinc sensing, to name but a few []. Zinc-binding motifs are stable structures, and they rarely undergo conformational changes upon binding their target. Members of this entry bind to a 5'-GAGAG-3' DNA consensus binding site, and contain a Cys2-His2 zinc finger core as well as an N-terminal extension containing two highly basic regions. The zinc finger core binds in the DNA major groove and recognises the first three GAG bases of the consensus in a manner similar to that seen in other classical zinc finger-DNA complexes. The second basic region forms a helix that interacts in the major groove recognising the last G of the consensus, while the first basic region wraps around the DNA in the minor groove and recognises the A in the fourth position of the consensus sequence []. More information about these proteins can be found at Protein of the Month: Zinc Fingers [].; PDB: 1YUI_A 1YUJ_A.

>PF05605 zf-Di19: Drought induced 19 protein (Di19), zinc-binding; InterPro: IPR008598 This entry consists of several drought induced 19 (Di19) like and RING finger 114 proteins

Probab=93.30  E-value=0.048  Score=32.52  Aligned_cols=40  Identities=13%  Similarity=0.154  Sum_probs=30.1

Q ss_pred             CCCCCCCCCCCCCCCccCCCCChhhhccccccCCCCCCCCCCCCcccc
Q 044013           53 AKNRPPSSSSISDKLTFFPSPSTWDDHQRSVHTNNNNHSNYDSYGQNY  100 (153)
Q Consensus        53 p~~C~~c~~~~Cgk~~~F~~~~~L~~H~~~~Ht~~kp~~~~~~~~~~f  100 (153)
                      .|.||.|++.       |.. ..|..|....|..+.....|++|...+
T Consensus         2 ~f~CP~C~~~-------~~~-~~L~~H~~~~H~~~~~~v~CPiC~~~~   41 (54)
T PF05605_consen    2 SFTCPYCGKG-------FSE-SSLVEHCEDEHRSESKNVVCPICSSRV   41 (54)
T ss_pred             CcCCCCCCCc-------cCH-HHHHHHHHhHCcCCCCCccCCCchhhh
Confidence            4789977665       876 469999875788765445899999864

Di19 has been found to be strongly expressed in both the roots and leaves of Arabidopsis thaliana during progressive drought [], whilst RING finger proteins are thought to play a role in spermatogenesis. The precise function is unknown.

>PRK04860 hypothetical protein; Provisional

Probab=92.78  E-value=0.038  Score=40.66  Aligned_cols=36  Identities=14%  Similarity=0.075  Sum_probs=29.5

Q ss_pred             CCCCCCCCCCCCCCCccCCCCChhhhccccccCCCCCCCCCCCCccccc
Q 044013           53 AKNRPPSSSSISDKLTFFPSPSTWDDHQRSVHTNNNNHSNYDSYGQNYH  101 (153)
Q Consensus        53 p~~C~~c~~~~Cgk~~~F~~~~~L~~H~~~~Ht~~kp~~~~~~~~~~f~  101 (153)
                      +|.|. |+.          ....+..|.+ +|++++|| .|..|++.|.
T Consensus       119 ~Y~C~-C~~----------~~~~~rrH~r-i~~g~~~Y-rC~~C~~~l~  154 (160)
T PRK04860        119 PYRCK-CQE----------HQLTVRRHNR-VVRGEAVY-RCRRCGETLV  154 (160)
T ss_pred             EEEcC-CCC----------eeCHHHHHHH-HhcCCccE-ECCCCCceeE
Confidence            67885 543          3667899999 99999999 7889999873

>PF12756 zf-C2H2_2: C2H2 type zinc-finger (2 copies); PDB: 2DMI_A

Probab=92.05  E-value=0.14  Score=33.48  Aligned_cols=25  Identities=32%  Similarity=0.805  Sum_probs=21.5

Q ss_pred             ceeccccccccCChhHHHHHHHhhc
Q 044013           25 SYECVFCKRGFTTAQALGGHMNIHR   49 (153)
Q Consensus        25 p~~C~~Cgk~F~~~~~L~~H~r~H~   49 (153)
                      ++.|.+|++.|.....|..|++.+.
T Consensus        50 ~~~C~~C~~~f~s~~~l~~Hm~~~~   74 (100)
T PF12756_consen   50 SFRCPYCNKTFRSREALQEHMRSKH   74 (100)
T ss_dssp             SEEBSSSS-EESSHHHHHHHHHHTT
T ss_pred             CCCCCccCCCCcCHHHHHHHHcCcc
Confidence            6899999999999999999999653

>cd00350 rubredoxin_like Rubredoxin_like; nonheme iron binding domain containing a [Fe(SCys)4] center

Probab=91.10  E-value=0.19  Score=26.90  Aligned_cols=25  Identities=16%  Similarity=0.336  Sum_probs=18.1

Q ss_pred             eeccccccccCChhHHHHHHHhhcCCCCCCCCCCCCC
Q 044013           26 YECVFCKRGFTTAQALGGHMNIHRKDRAKNRPPSSSS   62 (153)
Q Consensus        26 ~~C~~Cgk~F~~~~~L~~H~r~H~gekp~~C~~c~~~   62 (153)
                      |.|.+||..+....            .|+.||.|+..
T Consensus         2 ~~C~~CGy~y~~~~------------~~~~CP~Cg~~   26 (33)
T cd00350           2 YVCPVCGYIYDGEE------------APWVCPVCGAP   26 (33)
T ss_pred             EECCCCCCEECCCc------------CCCcCcCCCCc
Confidence            78999997765432            68899977644

The family includes rubredoxins, a small electron transfer protein, and a slightly smaller modular rubredoxin domain present in rubrerythrin and nigerythrin and detected either N- or C-terminal to such proteins as flavin reductase, NAD(P)H-nitrite reductase, and ferredoxin-thioredoxin reductase. In rubredoxin, the iron atom is coordinated by four cysteine residues (Fe(S-Cys)4), but iron can also be replaced by cobalt, nickel or zinc and believed to be involved in electron transfer. Rubrerythrins and nigerythrins are small homodimeric proteins, generally consisting of 2 domains: a rubredoxin domain C-terminal to a non-sulfur, oxo-bridged diiron site in the N-terminal rubrerythrin domain. Rubrerythrins and nigerythrins have putative peroxide activity.

>KOG2893 consensus Zn finger protein [General function prediction only]

Probab=87.52  E-value=0.35  Score=37.90  Aligned_cols=50  Identities=24%  Similarity=0.352  Sum_probs=37.2

Q ss_pred             CcceeccccccccCChhHHHHHHHhhcCCCCCCCCCCCCCCCCCCccCCCCChhhhc-cccccC
Q 044013           23 GRSYECVFCKRGFTTAQALGGHMNIHRKDRAKNRPPSSSSISDKLTFFPSPSTWDDH-QRSVHT   85 (153)
Q Consensus        23 ekp~~C~~Cgk~F~~~~~L~~H~r~H~gekp~~C~~c~~~~Cgk~~~F~~~~~L~~H-~~~~Ht   85 (153)
                      .|| .|=+|.+.|-...-|.+|+.    .|-|+|-     ||.|.  .-+..-|..| |+ +|.
T Consensus         9 ~kp-wcwycnrefddekiliqhqk----akhfkch-----ichkk--l~sgpglsihcmq-vhk   59 (341)
T KOG2893|consen    9 DKP-WCWYCNREFDDEKILIQHQK----AKHFKCH-----ICHKK--LFSGPGLSIHCMQ-VHK   59 (341)
T ss_pred             CCc-eeeecccccchhhhhhhhhh----hccceee-----eehhh--hccCCCceeehhh-hhh
Confidence            344 58899999999999998875    6789999     55555  6666667777 45 553

>KOG1146 consensus Homeobox protein [General function prediction only]

Probab=86.02  E-value=0.33  Score=45.95  Aligned_cols=52  Identities=21%  Similarity=0.288  Sum_probs=42.7

Q ss_pred             CcceeccccccccCChhHHHHHHHh-h------------------------cCCCCCCCCCCCCCCCCCCccCCCCChhh
Q 044013           23 GRSYECVFCKRGFTTAQALGGHMNI-H------------------------RKDRAKNRPPSSSSISDKLTFFPSPSTWD   77 (153)
Q Consensus        23 ekp~~C~~Cgk~F~~~~~L~~H~r~-H------------------------~gekp~~C~~c~~~~Cgk~~~F~~~~~L~   77 (153)
                      .|.|.|+.|+-.|+....|..|+|. |                        -+.+||.|..|..+       ++...+|.
T Consensus       463 ~kt~~cpkc~~~yk~a~~L~vhmRskhp~~~~~~c~~gq~~~~~arg~~~~~~~~p~~C~~C~~s-------tttng~Ls  535 (1406)
T KOG1146|consen  463 FKTLKCPKCNWHYKLAQTLGVHMRSKHPESQSAYCKAGQNHPRLARGEVYRCPGKPYPCRACNYS-------TTTNGNLS  535 (1406)
T ss_pred             cccccCCccchhhhhHHHhhhcccccccccchhHhHhccccccccccccccCCCCcccceeeeee-------eecchHHH
Confidence            3789999999999999999999998 1                        11357788877777       88888998


Q ss_pred             hccc
Q 044013           78 DHQR   81 (153)
Q Consensus        78 ~H~~   81 (153)
                      .|+.
T Consensus       536 ihlq  539 (1406)
T KOG1146|consen  536 IHLQ  539 (1406)
T ss_pred             HHHH
Confidence            8875

>COG1592 Rubrerythrin [Energy production and conversion]

Probab=84.65  E-value=0.69  Score=34.22  Aligned_cols=23  Identities=17%  Similarity=0.421  Sum_probs=18.3

Q ss_pred             ceeccccccccCChhHHHHHHHhhcCCCCCCCCCCC
Q 044013           25 SYECVFCKRGFTTAQALGGHMNIHRKDRAKNRPPSS   60 (153)
Q Consensus        25 p~~C~~Cgk~F~~~~~L~~H~r~H~gekp~~C~~c~   60 (153)
                      -|.|++||.             ++.|+-|-.||.|+
T Consensus       134 ~~vC~vCGy-------------~~~ge~P~~CPiCg  156 (166)
T COG1592         134 VWVCPVCGY-------------THEGEAPEVCPICG  156 (166)
T ss_pred             EEEcCCCCC-------------cccCCCCCcCCCCC
Confidence            689999985             45668899999666

>COG5048 FOG: Zn-finger [General function prediction only]

Probab=84.64  E-value=1.2  Score=35.87  Aligned_cols=61  Identities=26%  Similarity=0.443  Sum_probs=49.7

Q ss_pred             CCcceeccccccccCChhHHHHHHHhhcCCCCCCCCCCCCCCCCCCccCCCCChhhhccccccCCCC
Q 044013           22 TGRSYECVFCKRGFTTAQALGGHMNIHRKDRAKNRPPSSSSISDKLTFFPSPSTWDDHQRSVHTNNN   88 (153)
Q Consensus        22 gekp~~C~~Cgk~F~~~~~L~~H~r~H~gekp~~C~~c~~~~Cgk~~~F~~~~~L~~H~~~~Ht~~k   88 (153)
                      ..+++.|+.|...|........|.++|++++++.|..+++.   +.  |.....+..|.+ .+....
T Consensus        30 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~--~~~~~~~~~~~~-~~~~~~   90 (467)
T COG5048          30 APRPDSCPNCTDSFSRLEHLTRHIRSHTGEKPSQCSYSGCD---KS--FSRPLELSRHLR-THHNNP   90 (467)
T ss_pred             CCchhhcccccccccccchhhhhcccccccCCccccccccc---cc--cCCcchhhhhcc-cccccc
Confidence            35678999999999999999999999999999999866433   55  788888888887 555443

>cd00729 rubredoxin_SM Rubredoxin, Small Modular nonheme iron binding domain containing a [Fe(SCys)4] center, present in rubrerythrin and nigerythrin and detected either N- or C-terminal to such proteins as flavin reductase, NAD(P)H-nitrite reductase, and ferredoxin-thioredoxin reductase

Probab=82.82  E-value=0.95  Score=24.41  Aligned_cols=26  Identities=12%  Similarity=0.296  Sum_probs=17.6

Q ss_pred             ceeccccccccCChhHHHHHHHhhcCCCCCCCCCCCCC
Q 044013           25 SYECVFCKRGFTTAQALGGHMNIHRKDRAKNRPPSSSS   62 (153)
Q Consensus        25 p~~C~~Cgk~F~~~~~L~~H~r~H~gekp~~C~~c~~~   62 (153)
                      .|.|.+||..+...            +.|..|+.|+..
T Consensus         2 ~~~C~~CG~i~~g~------------~~p~~CP~Cg~~   27 (34)
T cd00729           2 VWVCPVCGYIHEGE------------EAPEKCPICGAP   27 (34)
T ss_pred             eEECCCCCCEeECC------------cCCCcCcCCCCc
Confidence            48899999764332            257789977643

In rubredoxin, the iron atom is coordinated by four cysteine residues (Fe(S-Cys)4), and believed to be involved in electron transfer. Rubrerythrins and nigerythrins are small homodimeric proteins, generally consisting of 2 domains: a rubredoxin domain C-terminal to a non-sulfur, oxo-bridged diiron site in the N-terminal rubrerythrin domain. Rubrerythrins and nigerythrins have putative peroxide activity.

>TIGR00373 conserved hypothetical protein TIGR00373

Probab=80.89  E-value=1  Score=32.94  Aligned_cols=31  Identities=16%  Similarity=0.117  Sum_probs=22.7

Q ss_pred             CcceeccccccccCChhHHHHHHHhhcCCCCCCCCCCCCC
Q 044013           23 GRSYECVFCKRGFTTAQALGGHMNIHRKDRAKNRPPSSSS   62 (153)
Q Consensus        23 ekp~~C~~Cgk~F~~~~~L~~H~r~H~gekp~~C~~c~~~   62 (153)
                      ..-|.|+.|+..|+...++.         --|.|+.||..
T Consensus       107 ~~~Y~Cp~c~~r~tf~eA~~---------~~F~Cp~Cg~~  137 (158)
T TIGR00373       107 NMFFICPNMCVRFTFNEAME---------LNFTCPRCGAM  137 (158)
T ss_pred             CCeEECCCCCcEeeHHHHHH---------cCCcCCCCCCE
Confidence            34588999998888887774         26889966544

This family of proteins is, so far, restricted to archaeal genomes. The family appears to be distantly related to the N-terminal region of the eukaryotic transcription initiation factor IIE alpha chain.

>PRK06266 transcription initiation factor E subunit alpha; Validated

Probab=80.71  E-value=1  Score=33.68  Aligned_cols=30  Identities=20%  Similarity=0.283  Sum_probs=21.0

Q ss_pred             cceeccccccccCChhHHHHHHHhhcCCCCCCCCCCCCC
Q 044013           24 RSYECVFCKRGFTTAQALGGHMNIHRKDRAKNRPPSSSS   62 (153)
Q Consensus        24 kp~~C~~Cgk~F~~~~~L~~H~r~H~gekp~~C~~c~~~   62 (153)
                      .-|.|+.|++.|+...++.         --|.|+.|+..
T Consensus       116 ~~Y~Cp~C~~rytf~eA~~---------~~F~Cp~Cg~~  145 (178)
T PRK06266        116 MFFFCPNCHIRFTFDEAME---------YGFRCPQCGEM  145 (178)
T ss_pred             CEEECCCCCcEEeHHHHhh---------cCCcCCCCCCC
Confidence            4588888888888777653         35888855544

---

Homologous Structure Templates

Structure Templates Detected by BLAST

Original result of BLAST against Protein Data Bank

ID	Length	Definition	E-value
Query	153
2l1o_A	39	Zinc To Cadmium Replacement In The A. Thaliana Supe		8e-06

>pdb|2L1O|A Chain A, Zinc To Cadmium Replacement In The A. Thaliana Superman Cys2his2 Zinc Finger Induces Structural Rearrangements Of Typical Dna Base Determinant Positions Length = 39

Iteration: 1
 Score = 46.2 bits (108), Expect = 8e-06,   Method: Compositional matrix adjust.
 Identities = 19/25 (76%), Positives = 21/25 (84%)
Query: 24 RSYECVFCKRGFTTAQALGGHMNIH 48
          RSY C FCKR F +AQALGGHMN+H
Sbjct: 5  RSYTCSFCKREFRSAQALGGHMNVH 29

Structure Templates Detected by RPS-BLAST

Original result of RPS-BLAST against PDB70 database

ID	Length	Definition	E-value
Query	153
1njq_A	39	Superman protein; zinc-finger, peptide-zinc comple	1e-15

>1njq_A Superman protein; zinc-finger, peptide-zinc complex, beta-BETA-ALFA motif, metal binding protein; NMR {Synthetic} SCOP: g.37.1.3 PDB: 2l1o_A Length = 39

 Score = 65.2 bits (159), Expect = 1e-15
 Identities = 24/33 (72%), Positives = 28/33 (84%)

Query: 24 RSYECVFCKRGFTTAQALGGHMNIHRKDRAKNR 56
          RSY C FCKR F +AQALGGHMN+HR+DRA+ R
Sbjct: 5  RSYTCSFCKREFRSAQALGGHMNVHRRDRARLR 37

Structure Templates Detected by HHsearch

Original result of HHsearch against PDB70 database

ID	Length	Definition	Probability
Query	153
4gzn_C	60	ZFP-57, zinc finger protein 57; transcription-DNA	99.79
2lt7_A	133	Transcriptional regulator kaiso; zinc finger, doub	99.77
2dmi_A	115	Teashirt homolog 3; zinc finger protein 537, struc	99.72
2cot_A	77	Zinc finger protein 435; ADK_LID domain, zinc fing	99.67
2dlk_A	79	Novel protein; ZF-C2H2 domain, zinc finger protein	99.67
2ee8_A	106	Protein ODD-skipped-related 2; zinc binding, ZF-C2	99.66
1x6h_A	86	Transcriptional repressor CTCF; zinc finger protei	99.66
2lce_A	74	B-cell lymphoma 6 protein; structural genomics, no	99.66
2yt9_A	95	Zinc finger-containing protein 1; C2H2, structural	99.65
2lt7_A	133	Transcriptional regulator kaiso; zinc finger, doub	99.64
2dmd_A	96	Zinc finger protein 64, isoforms 1 and 2; ZNF338,	99.63
2ghf_A	102	ZHX1, zinc fingers and homeoboxes protein 1; C2H2	99.63
2csh_A	110	Zinc finger protein 297B; ZF-C2H2 domain, zinc fin	99.62
1a1h_A	90	QGSR zinc finger peptide; complex (zinc finger/DNA	99.61
1ubd_C	124	Protein (YY1 zinc finger domain); transcription in	99.61
2lv2_A	85	Insulinoma-associated protein 1; structural genomi	99.6
2kmk_A	82	Zinc finger protein GFI-1; tandem repeat zinc fing	99.59
1x6e_A	72	Zinc finger protein 24; ZNF24, KOX17, ZNF191, zsca	99.59
1x5w_A	70	Zinc finger protein 64, isoforms 1; ZNF338, nuclea	99.59
2gqj_A	98	Zinc finger protein KIAA1196; ZF-C2H2 like domain,	99.59
2dlq_A	124	GLI-kruppel family member HKR3; ZF-C2H2 domain, st	99.58
2jp9_A	119	Wilms tumor 1; DNA binding, nucleic acid recogniti	99.58
2ct1_A	77	Transcriptional repressor CTCF; CCCTC-BINDING fact	99.57
2i13_A	190	AART; DNA binding, zinc finger, DNA binding protei	99.56
2ee8_A	106	Protein ODD-skipped-related 2; zinc binding, ZF-C2	99.56
1wjp_A	107	Zinc finger protein 295; ZF-C2H2 domain, zinc bind	99.54
3uk3_C	57	Zinc finger protein 217; transcription factor, DNA	99.54
2gli_A	155	Protein (five-finger GLI); protein/DNA complex, tr	99.54
2d9h_A	78	Zinc finger protein 692; ZF-C2H2 domain, structura	99.53
2ebt_A	100	Krueppel-like factor 5; C2H2-type zinc-finger, met	99.52
1bbo_A	57	Human enhancer-binding protein MBP-1; DNA-binding	99.52
1llm_C	88	Chimera of ZIF23-GCN4; dimerization, DNA recogniti	99.51
1f2i_G	73	Fusion of N-terminal 17-MER peptide extension to Z	99.51
2ctd_A	96	Zinc finger protein 512; zinc binding, two ZF-C2H2	99.51
2rpc_A	155	Zinc finger protein ZIC 3; ZF-C2H2, zinc finger pr	99.51
2dlq_A	124	GLI-kruppel family member HKR3; ZF-C2H2 domain, st	99.51
1a1h_A	90	QGSR zinc finger peptide; complex (zinc finger/DNA	99.51
2wbs_A	89	Krueppel-like factor 4; transcription-DNA complex,	99.51
2jp9_A	119	Wilms tumor 1; DNA binding, nucleic acid recogniti	99.5
2adr_A	60	ADR1; transcription regulation, zinc finger,; NMR	99.5
2i13_A	190	AART; DNA binding, zinc finger, DNA binding protei	99.49
2dmd_A	96	Zinc finger protein 64, isoforms 1 and 2; ZNF338,	99.49
2ctu_A	73	Zinc finger protein 483; zinc finger domain, struc	99.49
2rpc_A	155	Zinc finger protein ZIC 3; ZF-C2H2, zinc finger pr	99.48
2gli_A	155	Protein (five-finger GLI); protein/DNA complex, tr	99.47
2drp_A	66	Protein (tramtrack DNA-binding domain); protein-DN	99.46
2kmk_A	82	Zinc finger protein GFI-1; tandem repeat zinc fing	99.44
1tf6_A	190	Protein (transcription factor IIIA); complex (tran	99.44
1ubd_C	124	Protein (YY1 zinc finger domain); transcription in	99.43
2emk_A	46	Zinc finger protein 28 homolog; ZF-C2H2, structura	99.43
2eml_A	46	Zinc finger protein 28 homolog; ZF-C2H2, structura	99.43
2eod_A	66	TNF receptor-associated factor 4; zinc binding, NF	99.43
2emf_A	46	Zinc finger protein 484; ZF-C2H2, structural genom	99.42
2ytn_A	46	Zinc finger protein 347; ZF-C2H2, structural genom	99.42
2emp_A	46	Zinc finger protein 347; ZF-C2H2, structural genom	99.42
2ely_A	46	Zinc finger protein 224; DNA-binding, metal-bindin	99.42
2eq4_A	46	Zinc finger protein 224; C2H2, zinc finger domain,	99.42
2eoe_A	46	Zinc finger protein 347; ZF-C2H2, structural genom	99.42
2emh_A	46	Zinc finger protein 484; ZF-C2H2, structural genom	99.42
2emy_A	46	Zinc finger protein 268; ZF-C2H2, structural genom	99.42
2elz_A	46	Zinc finger protein 224; DNA-binding, metal-bindin	99.42
2el4_A	46	Zinc finger protein 268; alternative splicing, DNA	99.42
2emm_A	46	ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, s	99.42
1tf6_A	190	Protein (transcription factor IIIA); complex (tran	99.42
2ema_A	46	Zinc finger protein 347; ZF-C2H2, structural genom	99.42
2em7_A	46	Zinc finger protein 224; ZF-C2H2, structural genom	99.41
2em0_A	46	Zinc finger protein 224; DNA-binding, metal-bindin	99.41
2ene_A	46	Zinc finger protein 347; ZF-C2H2, structural genom	99.41
2ytq_A	46	Zinc finger protein 268; ZF-C2H2, structural genom	99.41
2eov_A	46	Zinc finger protein 484; ZF-C2H2, structural genom	99.41
2em9_A	46	Zinc finger protein 224; ZF-C2H2, structural genom	99.41
2ytk_A	46	Zinc finger protein 347; ZF-C2H2, structural genom	99.41
2epz_A	46	Zinc finger protein 28 homolog; C2H2, zinc finger	99.41
2yt9_A	95	Zinc finger-containing protein 1; C2H2, structural	99.41
2eoo_A	46	ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, s	99.41
2yu8_A	46	Zinc finger protein 347; ZF-C2H2, structural genom	99.41
2eoq_A	46	Zinc finger protein 224; ZF-C2H2, structural genom	99.4
2en6_A	46	Zinc finger protein 268; ZF-C2H2, structural genom	99.4
2eop_A	46	Zinc finger protein 268; ZF-C2H2, structural genom	99.4
2ytj_A	46	Zinc finger protein 484; ZF-C2H2, structural genom	99.4
2ysp_A	46	Zinc finger protein 224; ZF-C2H2, structural genom	99.4
2epw_A	46	Zinc finger protein 268; C2H2, zinc finger domain,	99.4
2ep2_A	46	Zinc finger protein 484; ZF-C2H2, structural genom	99.4
2ytr_A	46	Zinc finger protein 347; ZF-C2H2, structural genom	99.4
2ytd_A	46	Zinc finger protein 473; ZF-C2H2, structural genom	99.4
2eq0_A	46	Zinc finger protein 347; C2H2, zinc finger domain,	99.4
2ytg_A	46	ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, s	99.4
2em5_A	46	ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, s	99.4
2eme_A	46	Zinc finger protein 473; ZF-C2H2, structural genom	99.4
2ep3_A	46	Zinc finger protein 484; ZF-C2H2, structural genom	99.4
2yso_A	46	ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, s	99.4
2ytm_A	46	Zinc finger protein 28 homolog; ZF-C2H2, structura	99.39
2en8_A	46	Zinc finger protein 224; ZF-C2H2, structural genom	99.39
2el6_A	46	Zinc finger protein 268; alternative splicing, DNA	99.39
2enc_A	46	Zinc finger protein 224; ZF-C2H2, structural genom	99.39
2em8_A	46	Zinc finger protein 224; ZF-C2H2, structural genom	99.39
2en1_A	46	Zinc finger protein 224; ZF-C2H2, structural genom	99.39
2j7j_A	85	Transcription factor IIIA; zinc finger module, alt	99.39
2ej4_A	95	Zinc finger protein ZIC 3; ZF-C2H2 domain, zinc bi	99.38
2emx_A	44	Zinc finger protein 268; ZF-C2H2, structural genom	99.38
2ebt_A	100	Krueppel-like factor 5; C2H2-type zinc-finger, met	99.37
2em2_A	46	Zinc finger protein 28 homolog; ZF-C2H2, structura	99.37
1wjp_A	107	Zinc finger protein 295; ZF-C2H2 domain, zinc bind	99.36
2epx_A	47	Zinc finger protein 28 homolog; C2H2, zinc finger	99.35
2wbs_A	89	Krueppel-like factor 4; transcription-DNA complex,	99.35
2em4_A	46	Zinc finger protein 28 homolog; ZF-C2H2, structura	99.35
2emj_A	46	Zinc finger protein 28 homolog; ZF-C2H2, structura	99.33
2epa_A	72	Krueppel-like factor 10; transforming growth facto	99.33
2emg_A	46	Zinc finger protein 484; ZF-C2H2, structural genom	99.33
2eow_A	46	Zinc finger protein 347; ZF-C2H2, structural genom	99.33
2enf_A	46	Zinc finger protein 347; ZF-C2H2, structural genom	99.33
2eq2_A	46	Zinc finger protein 347; C2H2, zinc finger domain,	99.33
2emi_A	46	Zinc finger protein 484; ZF-C2H2, structural genom	99.33
2en9_A	46	Zinc finger protein 28 homolog; ZF-C2H2, structura	99.33
2ytp_A	46	Zinc finger protein 484; ZF-C2H2, structural genom	99.33
2eor_A	46	Zinc finger protein 224; ZF-C2H2, structural genom	99.32
2ep0_A	46	Zinc finger protein 28 homolog; ZF-C2H2, structura	99.32
2eoz_A	46	Zinc finger protein 473; ZF-C2H2, structural genom	99.32
2em3_A	46	Zinc finger protein 28 homolog; ZF-C2H2, structura	99.32
2eps_A	54	POZ-, at HOOK-, and zinc finger-containing protein	99.32
2ytf_A	46	Zinc finger protein 268; ZF-C2H2, structural genom	99.32
2eoh_A	46	Zinc finger protein 28 homolog; ZF-C2H2, structura	99.32
2yts_A	46	Zinc finger protein 484; ZF-C2H2, structural genom	99.32
2epr_A	48	POZ-, at HOOK-, and zinc finger-containing protein	99.32
2ep1_A	46	Zinc finger protein 484; ZF-C2H2, structural genom	99.31
2wbt_A	129	B-129; zinc finger; 2.70A {Sulfolobus virus 1}	99.31
2eoj_A	44	Zinc finger protein 268; ZF-C2H2, structural genom	99.31
2yti_A	46	Zinc finger protein 347; ZF-C2H2, structural genom	99.31
2em6_A	46	Zinc finger protein 224; ZF-C2H2, structural genom	99.31
2yth_A	46	Zinc finger protein 224; ZF-C2H2, structural genom	99.31
2en7_A	44	Zinc finger protein 268; ZF-C2H2, structural genom	99.31
2eq1_A	46	Zinc finger protein 347; C2H2, zinc finger domain,	99.31
2el5_A	42	Zinc finger protein 268; alternative splicing, DNA	99.31
2yrj_A	46	Zinc finger protein 473; C2H2-type zinc finger, st	99.3
2yto_A	46	Zinc finger protein 484; ZF-C2H2, structural genom	99.3
2eon_A	46	ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, s	99.3
2enh_A	46	Zinc finger protein 28 homolog; ZF-C2H2, structura	99.3
2eof_A	44	Zinc finger protein 268; ZF-C2H2, structural genom	99.3
2csh_A	110	Zinc finger protein 297B; ZF-C2H2 domain, zinc fin	99.29
2emb_A	44	Zinc finger protein 473; ZF-C2H2, structural genom	99.29
2epq_A	45	POZ-, at HOOK-, and zinc finger-containing protein	99.28
2ytt_A	46	Zinc finger protein 473; ZF-C2H2, structural genom	99.28
2emz_A	46	ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, s	99.28
2yu5_A	44	Zinc finger protein 473; ZF-C2H2 domain, structura	99.28
1vd4_A	62	Transcription initiation factor IIE, alpha subunit	99.28
2yte_A	42	Zinc finger protein 473; ZF-C2H2, structural genom	99.27
2eq3_A	46	Zinc finger protein 347; C2H2, zinc finger domain,	99.27
2en2_A	42	B-cell lymphoma 6 protein; ZF-C2H2, structural gen	99.27
2epc_A	42	Zinc finger protein 32; zinc finger domain, C2H2,	99.26
2ytb_A	42	Zinc finger protein 32; zinc-finger domain, C2H2,	99.26
2eox_A	44	Zinc finger protein 473; ZF-C2H2, structural genom	99.26
2eoy_A	46	Zinc finger protein 473; ZF-C2H2, structural genom	99.25
2eou_A	44	Zinc finger protein 473; ZF-C2H2, structural genom	99.25
2en3_A	46	ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, s	99.25
2epu_A	45	Zinc finger protein 32; C2H2, zinc finger domain,	99.24
2eos_A	42	B-cell lymphoma 6 protein; ZF-C2H2, structural gen	99.24
2eom_A	46	ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, s	99.24
2epv_A	44	Zinc finger protein 268; C2H2, zinc finger domain,	99.24
2ent_A	48	Krueppel-like factor 15; zinc binding, transcripti	99.21
2em0_A	46	Zinc finger protein 224; DNA-binding, metal-bindin	99.18
1yui_A	54	GAGA-factor; complex (DNA-binding protein/DNA), ch	99.18
2dlk_A	79	Novel protein; ZF-C2H2 domain, zinc finger protein	99.18
2ept_A	41	Zinc finger protein 32; C2H2, zinc finger domain,	99.17
2dmi_A	115	Teashirt homolog 3; zinc finger protein 537, struc	99.17
2ely_A	46	Zinc finger protein 224; DNA-binding, metal-bindin	99.17
2yrm_A	43	B-cell lymphoma 6 protein; ZF-C2H2, zinc binding,	99.16
2ytn_A	46	Zinc finger protein 347; ZF-C2H2, structural genom	99.16
2ytr_A	46	Zinc finger protein 347; ZF-C2H2, structural genom	99.16
4gzn_C	60	ZFP-57, zinc finger protein 57; transcription-DNA	99.15
1x6f_A	88	Zinc finger protein 462; zinc finger domain, KIAA1	99.15
2ytq_A	46	Zinc finger protein 268; ZF-C2H2, structural genom	99.15
2epz_A	46	Zinc finger protein 28 homolog; C2H2, zinc finger	99.15
2elz_A	46	Zinc finger protein 224; DNA-binding, metal-bindin	99.15
2eq4_A	46	Zinc finger protein 224; C2H2, zinc finger domain,	99.15
2eop_A	46	Zinc finger protein 268; ZF-C2H2, structural genom	99.15
2eoq_A	46	Zinc finger protein 224; ZF-C2H2, structural genom	99.14
2emf_A	46	Zinc finger protein 484; ZF-C2H2, structural genom	99.13
2ytg_A	46	ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, s	99.13
2gqj_A	98	Zinc finger protein KIAA1196; ZF-C2H2 like domain,	99.13
2emk_A	46	Zinc finger protein 28 homolog; ZF-C2H2, structura	99.12
2el4_A	46	Zinc finger protein 268; alternative splicing, DNA	99.12
2eml_A	46	Zinc finger protein 28 homolog; ZF-C2H2, structura	99.12
2eme_A	46	Zinc finger protein 473; ZF-C2H2, structural genom	99.11
2ene_A	46	Zinc finger protein 347; ZF-C2H2, structural genom	99.11
2eov_A	46	Zinc finger protein 484; ZF-C2H2, structural genom	99.11
2eoe_A	46	Zinc finger protein 347; ZF-C2H2, structural genom	99.11
1yui_A	54	GAGA-factor; complex (DNA-binding protein/DNA), ch	99.11
2em7_A	46	Zinc finger protein 224; ZF-C2H2, structural genom	99.11
2eq0_A	46	Zinc finger protein 347; C2H2, zinc finger domain,	99.1
2em9_A	46	Zinc finger protein 224; ZF-C2H2, structural genom	99.1
2em5_A	46	ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, s	99.1
2ep2_A	46	Zinc finger protein 484; ZF-C2H2, structural genom	99.1
2en8_A	46	Zinc finger protein 224; ZF-C2H2, structural genom	99.1
2ema_A	46	Zinc finger protein 347; ZF-C2H2, structural genom	99.1
2epw_A	46	Zinc finger protein 268; C2H2, zinc finger domain,	99.1
2ytj_A	46	Zinc finger protein 484; ZF-C2H2, structural genom	99.1
2emx_A	44	Zinc finger protein 268; ZF-C2H2, structural genom	99.1
1x3c_A	73	Zinc finger protein 292; DNA binding, nuclear prot	99.09
2emm_A	46	ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, s	99.09
2yu8_A	46	Zinc finger protein 347; ZF-C2H2, structural genom	99.09
2ytm_A	46	Zinc finger protein 28 homolog; ZF-C2H2, structura	99.09
1njq_A	39	Superman protein; zinc-finger, peptide-zinc comple	99.08
2ytd_A	46	Zinc finger protein 473; ZF-C2H2, structural genom	99.08
2emy_A	46	Zinc finger protein 268; ZF-C2H2, structural genom	99.08
2d9k_A	75	FLN29 gene product; zinc finger, ZF-TRAF, structur	99.08
2ep3_A	46	Zinc finger protein 484; ZF-C2H2, structural genom	99.07
2en1_A	46	Zinc finger protein 224; ZF-C2H2, structural genom	99.07
2ytk_A	46	Zinc finger protein 347; ZF-C2H2, structural genom	99.07
2ytb_A	42	Zinc finger protein 32; zinc-finger domain, C2H2,	99.07
2enc_A	46	Zinc finger protein 224; ZF-C2H2, structural genom	99.07
2el6_A	46	Zinc finger protein 268; alternative splicing, DNA	99.07
2ctd_A	96	Zinc finger protein 512; zinc binding, two ZF-C2H2	99.07
2eoo_A	46	ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, s	99.07
2eq2_A	46	Zinc finger protein 347; C2H2, zinc finger domain,	99.07
2emh_A	46	Zinc finger protein 484; ZF-C2H2, structural genom	99.06
2yso_A	46	ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, s	99.06
2emp_A	46	Zinc finger protein 347; ZF-C2H2, structural genom	99.06
2ysp_A	46	Zinc finger protein 224; ZF-C2H2, structural genom	99.06
2epx_A	47	Zinc finger protein 28 homolog; C2H2, zinc finger	99.06
2yte_A	42	Zinc finger protein 473; ZF-C2H2, structural genom	99.06
2j7j_A	85	Transcription factor IIIA; zinc finger module, alt	99.05
2eq1_A	46	Zinc finger protein 347; C2H2, zinc finger domain,	99.05
2yti_A	46	Zinc finger protein 347; ZF-C2H2, structural genom	99.05
2ep1_A	46	Zinc finger protein 484; ZF-C2H2, structural genom	99.05
2emg_A	46	Zinc finger protein 484; ZF-C2H2, structural genom	99.05
2en7_A	44	Zinc finger protein 268; ZF-C2H2, structural genom	99.04
2eon_A	46	ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, s	99.04
2wbt_A	129	B-129; zinc finger; 2.70A {Sulfolobus virus 1}	99.04
2enf_A	46	Zinc finger protein 347; ZF-C2H2, structural genom	99.04
2eoh_A	46	Zinc finger protein 28 homolog; ZF-C2H2, structura	99.04
2yth_A	46	Zinc finger protein 224; ZF-C2H2, structural genom	99.04
2em6_A	46	Zinc finger protein 224; ZF-C2H2, structural genom	99.03
2el5_A	42	Zinc finger protein 268; alternative splicing, DNA	99.03
2eos_A	42	B-cell lymphoma 6 protein; ZF-C2H2, structural gen	99.03
1rim_A	33	E6APC2 peptide; E6-binding domain, zinc finger, hu	99.03
2em2_A	46	Zinc finger protein 28 homolog; ZF-C2H2, structura	99.03
2en6_A	46	Zinc finger protein 268; ZF-C2H2, structural genom	99.02
2enh_A	46	Zinc finger protein 28 homolog; ZF-C2H2, structura	99.02
2em8_A	46	Zinc finger protein 224; ZF-C2H2, structural genom	99.02
2ytp_A	46	Zinc finger protein 484; ZF-C2H2, structural genom	99.01
2yts_A	46	Zinc finger protein 484; ZF-C2H2, structural genom	99.0
2en9_A	46	Zinc finger protein 28 homolog; ZF-C2H2, structura	99.0
2cot_A	77	Zinc finger protein 435; ADK_LID domain, zinc fing	99.0
2yu5_A	44	Zinc finger protein 473; ZF-C2H2 domain, structura	98.99
2eoj_A	44	Zinc finger protein 268; ZF-C2H2, structural genom	98.99
2emi_A	46	Zinc finger protein 484; ZF-C2H2, structural genom	98.99
2em4_A	46	Zinc finger protein 28 homolog; ZF-C2H2, structura	98.99
2ytf_A	46	Zinc finger protein 268; ZF-C2H2, structural genom	98.98
2yrj_A	46	Zinc finger protein 473; C2H2-type zinc finger, st	98.98
2emj_A	46	Zinc finger protein 28 homolog; ZF-C2H2, structura	98.98
2eow_A	46	Zinc finger protein 347; ZF-C2H2, structural genom	98.97
2ct1_A	77	Transcriptional repressor CTCF; CCCTC-BINDING fact	98.97
2eps_A	54	POZ-, at HOOK-, and zinc finger-containing protein	98.96
2eof_A	44	Zinc finger protein 268; ZF-C2H2, structural genom	98.96
2em3_A	46	Zinc finger protein 28 homolog; ZF-C2H2, structura	98.96
2emb_A	44	Zinc finger protein 473; ZF-C2H2, structural genom	98.96
2ep0_A	46	Zinc finger protein 28 homolog; ZF-C2H2, structura	98.96
2ytt_A	46	Zinc finger protein 473; ZF-C2H2, structural genom	98.96
2epc_A	42	Zinc finger protein 32; zinc finger domain, C2H2,	98.95
2eoy_A	46	Zinc finger protein 473; ZF-C2H2, structural genom	98.95
2eou_A	44	Zinc finger protein 473; ZF-C2H2, structural genom	98.95
2emz_A	46	ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, s	98.95
2eor_A	46	Zinc finger protein 224; ZF-C2H2, structural genom	98.95
2en2_A	42	B-cell lymphoma 6 protein; ZF-C2H2, structural gen	98.95
2yto_A	46	Zinc finger protein 484; ZF-C2H2, structural genom	98.95
2epv_A	44	Zinc finger protein 268; C2H2, zinc finger domain,	98.95
2eq3_A	46	Zinc finger protein 347; C2H2, zinc finger domain,	98.95
2elo_A	37	Zinc finger protein 406; ZFAT zinc finger 1, struc	98.95
1vd4_A	62	Transcription initiation factor IIE, alpha subunit	98.93
2eoz_A	46	Zinc finger protein 473; ZF-C2H2, structural genom	98.92
1x6e_A	72	Zinc finger protein 24; ZNF24, KOX17, ZNF191, zsca	98.92
2eox_A	44	Zinc finger protein 473; ZF-C2H2, structural genom	98.9
2en3_A	46	ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, s	98.9
2elx_A	35	Zinc finger protein 406; ZFAT zinc finger 1, struc	98.89
2eom_A	46	ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, s	98.89
1srk_A	35	Zinc finger protein ZFPM1; classical zinc finger,	98.89
2epq_A	45	POZ-, at HOOK-, and zinc finger-containing protein	98.88
1p7a_A	37	BF3, BKLF, kruppel-like factor 3; classical zinc f	98.88
2ghf_A	102	ZHX1, zinc fingers and homeoboxes protein 1; C2H2	98.87
2ent_A	48	Krueppel-like factor 15; zinc binding, transcripti	98.87
2lv2_A	85	Insulinoma-associated protein 1; structural genomi	98.86
2drp_A	66	Protein (tramtrack DNA-binding domain); protein-DN	98.85
2eln_A	38	Zinc finger protein 406; ZFAT zinc finger 1, struc	98.84
2lce_A	74	B-cell lymphoma 6 protein; structural genomics, no	98.84
2ept_A	41	Zinc finger protein 32; C2H2, zinc finger domain,	98.83
2yrm_A	43	B-cell lymphoma 6 protein; ZF-C2H2, zinc binding,	98.83
2epr_A	48	POZ-, at HOOK-, and zinc finger-containing protein	98.82
2epu_A	45	Zinc finger protein 32; C2H2, zinc finger domain,	98.82
1bhi_A	38	CRE-BP1, ATF-2; CRE binding protein, transcription	98.81
1llm_C	88	Chimera of ZIF23-GCN4; dimerization, DNA recogniti	98.81
1x6h_A	86	Transcriptional repressor CTCF; zinc finger protei	98.8
2ej4_A	95	Zinc finger protein ZIC 3; ZF-C2H2 domain, zinc bi	98.8
2kfq_A	32	FP1; protein, de novo protein; NMR {Synthetic}	98.78
1x5w_A	70	Zinc finger protein 64, isoforms 1; ZNF338, nuclea	98.78
3uk3_C	57	Zinc finger protein 217; transcription factor, DNA	98.77
2elv_A	36	Zinc finger protein 406; ZFAT zinc finger 1, struc	98.76
2elt_A	36	Zinc finger protein 406; ZFAT zinc finger 1, struc	98.76
2elr_A	36	Zinc finger protein 406; ZFAT zinc finger 1, struc	98.74
1p7a_A	37	BF3, BKLF, kruppel-like factor 3; classical zinc f	98.74
2elq_A	36	Zinc finger protein 406; ZFAT zinc finger 1, struc	98.74
2els_A	36	Zinc finger protein 406; ZFAT zinc finger 1, struc	98.74
2d9h_A	78	Zinc finger protein 692; ZF-C2H2 domain, structura	98.73
2elp_A	37	Zinc finger protein 406; ZFAT zinc finger 1, struc	98.72
2m0d_A	30	Zinc finger and BTB domain-containing protein 17;	98.71
2elo_A	37	Zinc finger protein 406; ZFAT zinc finger 1, struc	98.7
2ctu_A	73	Zinc finger protein 483; zinc finger domain, struc	98.69
1va1_A	37	Transcription factor SP1; C2H2 type zinc finger, D	98.67
1rik_A	29	E6APC1 peptide; E6-binding domain, zinc finger, hu	98.67
1njq_A	39	Superman protein; zinc-finger, peptide-zinc comple	98.65
2adr_A	60	ADR1; transcription regulation, zinc finger,; NMR	98.65
2elm_A	37	Zinc finger protein 406; ZFAT zinc finger 1, struc	98.65
1fv5_A	36	First zinc finger of U-shaped; CCHC, protein inter	98.65
1ard_A	29	Yeast transcription factor ADR1; transcription reg	98.64
2m0f_A	29	Zinc finger and BTB domain-containing protein 17;	98.64
1x3c_A	73	Zinc finger protein 292; DNA binding, nuclear prot	98.64
1klr_A	30	Zinc finger Y-chromosomal protein; transcription;	98.62
3iuf_A	48	Zinc finger protein UBI-D4; structural genomics co	98.61
1zfd_A	32	SWI5; DNA binding motif, zinc finger DNA binding d	98.61
2m0e_A	29	Zinc finger and BTB domain-containing protein 17;	98.61
1srk_A	35	Zinc finger protein ZFPM1; classical zinc finger,	98.61
2elx_A	35	Zinc finger protein 406; ZFAT zinc finger 1, struc	98.61
1f2i_G	73	Fusion of N-terminal 17-MER peptide extension to Z	98.58
2kvf_A	28	Zinc finger and BTB domain-containing protein 32;	98.58
1sp2_A	31	SP1F2; zinc finger, transcription activation; NMR	98.58
2lvr_A	30	Zinc finger and BTB domain-containing protein 17;	97.99
2kvh_A	27	Zinc finger and BTB domain-containing protein 32;	98.57
1ncs_A	47	Peptide M30F, transcriptional factor SWI5; DNA bin	98.57
2lvt_A	29	Zinc finger and BTB domain-containing protein 17;	97.98
2kvg_A	27	Zinc finger and BTB domain-containing protein 32;	98.56
1bbo_A	57	Human enhancer-binding protein MBP-1; DNA-binding	98.52
2epp_A	66	POZ-, at HOOK-, and zinc finger-containing protein	98.51
1paa_A	30	Yeast transcription factor ADR1; transcription reg	98.49
1znf_A	27	31ST zinc finger from XFIN; zinc finger DNA bindin	98.48
1rim_A	33	E6APC2 peptide; E6-binding domain, zinc finger, hu	98.46
1bhi_A	38	CRE-BP1, ATF-2; CRE binding protein, transcription	98.45
2elv_A	36	Zinc finger protein 406; ZFAT zinc finger 1, struc	98.43
2elp_A	37	Zinc finger protein 406; ZFAT zinc finger 1, struc	98.43
2kfq_A	32	FP1; protein, de novo protein; NMR {Synthetic}	98.42
2elq_A	36	Zinc finger protein 406; ZFAT zinc finger 1, struc	98.39
2elm_A	37	Zinc finger protein 406; ZFAT zinc finger 1, struc	98.39
2eln_A	38	Zinc finger protein 406; ZFAT zinc finger 1, struc	98.39
2elr_A	36	Zinc finger protein 406; ZFAT zinc finger 1, struc	98.37
2lvu_A	26	Zinc finger and BTB domain-containing protein 17;	97.73
2elt_A	36	Zinc finger protein 406; ZFAT zinc finger 1, struc	98.36
1ncs_A	47	Peptide M30F, transcriptional factor SWI5; DNA bin	98.35
2eod_A	66	TNF receptor-associated factor 4; zinc binding, NF	98.31
2ab3_A	29	ZNF29; zinc finger protein, beta BETA alpha, RREII	98.28
3iuf_A	48	Zinc finger protein UBI-D4; structural genomics co	98.28
2els_A	36	Zinc finger protein 406; ZFAT zinc finger 1, struc	98.26
1x6f_A	88	Zinc finger protein 462; zinc finger domain, KIAA1	98.24
2epa_A	72	Krueppel-like factor 10; transforming growth facto	98.2
1va1_A	37	Transcription factor SP1; C2H2 type zinc finger, D	98.12
1zfd_A	32	SWI5; DNA binding motif, zinc finger DNA binding d	98.07
2epp_A	66	POZ-, at HOOK-, and zinc finger-containing protein	98.04
2m0e_A	29	Zinc finger and BTB domain-containing protein 17;	98.04
2lvr_A	30	Zinc finger and BTB domain-containing protein 17;	97.29
1klr_A	30	Zinc finger Y-chromosomal protein; transcription;	98.02
2lvt_A	29	Zinc finger and BTB domain-containing protein 17;	97.27
2m0d_A	30	Zinc finger and BTB domain-containing protein 17;	98.0
1sp2_A	31	SP1F2; zinc finger, transcription activation; NMR	97.99
1rik_A	29	E6APC1 peptide; E6-binding domain, zinc finger, hu	97.98
1paa_A	30	Yeast transcription factor ADR1; transcription reg	97.96
1ard_A	29	Yeast transcription factor ADR1; transcription reg	97.96
2d9k_A	75	FLN29 gene product; zinc finger, ZF-TRAF, structur	97.85
2kvf_A	28	Zinc finger and BTB domain-containing protein 32;	97.83
1znf_A	27	31ST zinc finger from XFIN; zinc finger DNA bindin	97.78
2m0f_A	29	Zinc finger and BTB domain-containing protein 17;	97.78
1fv5_A	36	First zinc finger of U-shaped; CCHC, protein inter	97.77
2lvu_A	26	Zinc finger and BTB domain-containing protein 17;	96.95
2kvh_A	27	Zinc finger and BTB domain-containing protein 32;	97.75
2kvg_A	27	Zinc finger and BTB domain-containing protein 32;	97.72
1zw8_A	64	Zinc-responsive transcriptional regulator ZAP1; in	97.22
2ab3_A	29	ZNF29; zinc finger protein, beta BETA alpha, RREII	97.17
1zr9_A	124	Zinc finger protein 593; DNA binding, structural g	96.74
1zr9_A	124	Zinc finger protein 593; DNA binding, structural g	95.3
2e72_A	49	POGO transposable element with ZNF domain; zinc fi	95.1
1zu1_A	127	DSRBP-ZFA, RNA binding protein ZFA; zinc finger pr	94.5
3hcs_A	170	TNF receptor-associated factor 6; cross-brace, bet	91.27
2e72_A	49	POGO transposable element with ZNF domain; zinc fi	90.36
3mjh_B	34	Early endosome antigen 1; protein-zinc finger comp	89.09
2gmg_A	105	Hypothetical protein PF0610; winged-helix like pro	87.49
2jsp_A	87	Transcriptional regulatory protein ROS; prokaryoti	84.59
2elu_A	37	Zinc finger protein 406; ZFAT zinc finger 1, struc	82.35
1yuz_A	202	Nigerythrin; rubrythrin, rubredoxin, hemerythrin,	80.6

>4gzn_C ZFP-57, zinc finger protein 57; transcription-DNA complex; HET: DNA 5CM; 0.99A {Mus musculus}

Probab=99.79  E-value=1.8e-20  Score=115.47  Aligned_cols=58  Identities=28%  Similarity=0.524  Sum_probs=54.2

Q ss_pred             CcceeccccccccCChhHHHHHHHhhcCCCCCCCCCCCCCCCCCCccCCCCChhhhccccccCCCC
Q 044013           23 GRSYECVFCKRGFTTAQALGGHMNIHRKDRAKNRPPSSSSISDKLTFFPSPSTWDDHQRSVHTNNN   88 (153)
Q Consensus        23 ekp~~C~~Cgk~F~~~~~L~~H~r~H~gekp~~C~~c~~~~Cgk~~~F~~~~~L~~H~~~~Ht~~k   88 (153)
                      ||||.|.+||+.|.....|..|+++|+|++||.|+.|++.       |.+.++|..|++ +|+|++
T Consensus         2 EKpy~C~~C~k~F~~~~~L~~H~~~Ht~ekp~~C~~C~k~-------F~~~~~L~~H~~-~Htgep   59 (60)
T 4gzn_C            2 ERPFFCNFCGKTYRDASGLSRHRRAHLGYRPRSCPECGKC-------FRDQSEVNRHLK-VHQNKP   59 (60)
T ss_dssp             CCCEECTTTCCEESSHHHHHHHHHHHHTCCCEECTTTCCE-------ESSHHHHHHHGG-GGSCC-
T ss_pred             CCCccCCCCCCEeCCHHHHHHHHHHhCCCcCeECCCCCCC-------cCCHHHHHHHhC-ccCCCC
Confidence            8999999999999999999999999999999999966666       999999999999 999974

>2lt7_A Transcriptional regulator kaiso; zinc finger, double helix, metal binding protein-DNA complex; HET: DNA; NMR {Homo sapiens} PDB: 4f6m_A* 4f6n_A*

Probab=99.77  E-value=3.9e-20  Score=130.78  Aligned_cols=88  Identities=20%  Similarity=0.311  Sum_probs=75.6

Q ss_pred             CcccccCCCCcceeccccccccCChhHHHHHHHhhcCCCCCCCCCCCCCCCCCCccCCCCChhhhccccccCCCCCCCCC
Q 044013           14 SDDETDAGTGRSYECVFCKRGFTTAQALGGHMNIHRKDRAKNRPPSSSSISDKLTFFPSPSTWDDHQRSVHTNNNNHSNY   93 (153)
Q Consensus        14 ~h~~~~~~gekp~~C~~Cgk~F~~~~~L~~H~r~H~gekp~~C~~c~~~~Cgk~~~F~~~~~L~~H~~~~Ht~~kp~~~~   93 (153)
                      .|......|++||.|++|++.|.....|..|+++|++++||.|+.|++.       |.....|..|++ +|++++|| .|
T Consensus        11 ~h~~~~h~Gek~y~C~~C~k~F~~~~~L~~H~~~H~~~k~~~C~~C~k~-------F~~~~~L~~H~~-~H~~~k~~-~C   81 (133)
T 2lt7_A           11 DHYELIVDGRVYYICIVCKRSYVCLTSLRRHFNIHSWEKKYPCRYCEKV-------FPLAEYRTKHEI-HHTGERRY-QC   81 (133)
T ss_dssp             SEEEEEETTEEEEEETTTCCEESCHHHHHHHHHHHHCCSCEECSSSSCE-------ESSHHHHHHHHH-HHHTCCCE-EE
T ss_pred             hhceeecCCCcCeECCCCCCCcCCHHHHHHHHHHcCCCCCeeCCccCee-------cccccchhhhcc-ccCCCccc-cC
Confidence            3434445579999999999999999999999999999999999966555       999999999999 99999999 79


Q ss_pred             CCCccccccCCcccchhh
Q 044013           94 DSYGQNYHQHLNMIGDEI  111 (153)
Q Consensus        94 ~~~~~~f~~~~~~~~~~~  111 (153)
                      ..|+++|.+... |..++
T Consensus        82 ~~C~k~F~~~~~-L~~H~   98 (133)
T 2lt7_A           82 LACGKSFINYQF-MSSHI   98 (133)
T ss_dssp             SSSCCEESSHHH-HHHHH
T ss_pred             CCCCCCcCCHHH-HHHHh
Confidence            999999966555 44443

>2dmi_A Teashirt homolog 3; zinc finger protein 537, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=99.72  E-value=1.3e-17  Score=113.32  Aligned_cols=92  Identities=14%  Similarity=0.237  Sum_probs=78.2

Q ss_pred             CCCCCcccccCCCCcceeccccccccCChhHHHHHHHh--hcCCCCCC-CCCCCCCCCCCCccC--CCCChhhhcccccc
Q 044013           10 SKSSSDDETDAGTGRSYECVFCKRGFTTAQALGGHMNI--HRKDRAKN-RPPSSSSISDKLTFF--PSPSTWDDHQRSVH   84 (153)
Q Consensus        10 ~~~~~h~~~~~~gekp~~C~~Cgk~F~~~~~L~~H~r~--H~gekp~~-C~~c~~~~Cgk~~~F--~~~~~L~~H~~~~H   84 (153)
                      ..|..|++.+++ ++||.|.+|++.|.....|..|+++  |.+.+++. |+.|++.       |  .....|..|++ +|
T Consensus         5 ~~l~~H~~~H~~-~~~~~C~~C~k~f~~~~~L~~H~~~~~h~~~~~~~~C~~C~~~-------f~f~~~~~l~~H~~-~H   75 (115)
T 2dmi_A            5 SSGKLYGSIFTG-ASKFRCKDCSAAYDTLVELTVHMNETGHYRDDNHETDNNNPKR-------WSKPRKRSLLEMEG-KE   75 (115)
T ss_dssp             CCCCCCCCCCCC-CCSEEBSSSSCEESSHHHHHHHHHHTCCCBCSCCCCCCCCCSC-------CSSCCCCCCCCCCC-SC
T ss_pred             hhhhhheeeeCC-CCCEECCccCchhcCHHHHHHHHHHhCccccCCCccCCCCCcc-------cccccHHHHHHHhh-cc
Confidence            458899988776 8999999999999999999999999  88888765 9966555       7  99999999999 99


Q ss_pred             CCCCCCCCCCCCccccccCCcccchhhh
Q 044013           85 TNNNNHSNYDSYGQNYHQHLNMIGDEIW  112 (153)
Q Consensus        85 t~~kp~~~~~~~~~~f~~~~~~~~~~~~  112 (153)
                      ++++|| .|..|++.|.+... +..++.
T Consensus        76 ~~~~~~-~C~~C~k~f~~~~~-L~~H~~  101 (115)
T 2dmi_A           76 DAQKVL-KCMYCGHSFESLQD-LSVHMI  101 (115)
T ss_dssp             CCCSSC-BCSSSCCBCSSHHH-HHHHHH
T ss_pred             CCCcce-ECCCCCCccCCHHH-HHHHHH
Confidence            999999 79999999966554 555433

>2cot_A Zinc finger protein 435; ADK_LID domain, zinc finger and SCAN domain containing protein 16, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1

Probab=99.67  E-value=3.4e-17  Score=104.10  Aligned_cols=64  Identities=23%  Similarity=0.417  Sum_probs=59.0

Q ss_pred             cCCCCcceeccccccccCChhHHHHHHHhhcCCCCCCCCCCCCCCCCCCccCCCCChhhhccccccCCCCCC
Q 044013           19 DAGTGRSYECVFCKRGFTTAQALGGHMNIHRKDRAKNRPPSSSSISDKLTFFPSPSTWDDHQRSVHTNNNNH   90 (153)
Q Consensus        19 ~~~gekp~~C~~Cgk~F~~~~~L~~H~r~H~gekp~~C~~c~~~~Cgk~~~F~~~~~L~~H~~~~Ht~~kp~   90 (153)
                      ...+++||.|.+|++.|.....|..|+++|++++||.|+.|++.       |.....|..|++ +|++++||
T Consensus        12 ~~~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~C~~~-------f~~~~~L~~H~~-~H~~~~p~   75 (77)
T 2cot_A           12 QQRERRRYKCDECGKSFSHSSDLSKHRRTHTGEKPYKCDECGKA-------FIQRSHLIGHHR-VHTGSGPS   75 (77)
T ss_dssp             CCCCSCSSBCSSSCCBCSCHHHHHHHHTTTCCSCSEECSSSCCE-------ESSHHHHHHHGG-GSCCCCCC
T ss_pred             cCCCCCCEECCCCCcccCCHHHHHHHHHHcCCCcCeeCCCCCCc-------cCCHHHHHHHHH-HhCCCCCC
Confidence            34458999999999999999999999999999999999966666       999999999999 99999999

>2dlk_A Novel protein; ZF-C2H2 domain, zinc finger protein 692, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1

Probab=99.67  E-value=1.9e-17  Score=105.26  Aligned_cols=71  Identities=21%  Similarity=0.377  Sum_probs=65.7

Q ss_pred             CCCcceeccc--cccccCChhHHHHHHH-hhcCCCCCCCCC--CCCCCCCCCccCCCCChhhhccccccCCCCCCCCCCC
Q 044013           21 GTGRSYECVF--CKRGFTTAQALGGHMN-IHRKDRAKNRPP--SSSSISDKLTFFPSPSTWDDHQRSVHTNNNNHSNYDS   95 (153)
Q Consensus        21 ~gekp~~C~~--Cgk~F~~~~~L~~H~r-~H~gekp~~C~~--c~~~~Cgk~~~F~~~~~L~~H~~~~Ht~~kp~~~~~~   95 (153)
                      +++++|.|..  |++.|.....|..|++ +|++++||.|+.  |++.       |.....|..|++ +|++++|| .|..
T Consensus         3 ~~~~~~~C~~~~C~~~f~~~~~L~~H~~~~H~~~~~~~C~~~~C~k~-------f~~~~~L~~H~~-~H~~~~~~-~C~~   73 (79)
T 2dlk_A            3 SGSSGMPCDFPGCGRIFSNRQYLNHHKKYQHIHQKSFSCPEPACGKS-------FNFKKHLKEHMK-LHSDTRDY-ICEF   73 (79)
T ss_dssp             SCCSSEECSSTTTCCEESSHHHHHHHHHHGGGSCCCEECSCTTTCCE-------ESSHHHHHHHHH-HHHTSCCC-SCCS
T ss_pred             CCCCCccCCCCCCcCccCCHHHHHHHHHHHhCCCCCeECCCCCCcCc-------cCCHHHHHHHHH-HhCCCCCe-eCCC
Confidence            4578999997  9999999999999999 799999999996  6665       999999999999 99999999 7999


Q ss_pred             Ccccc
Q 044013           96 YGQNY  100 (153)
Q Consensus        96 ~~~~f  100 (153)
                      |+++|
T Consensus        74 C~k~F   78 (79)
T 2dlk_A           74 SGPSS   78 (79)
T ss_dssp             SSCCC
T ss_pred             CCCCC
Confidence            99998

>2ee8_A Protein ODD-skipped-related 2; zinc binding, ZF-C2H2 domain, structural genomics, NPPSFA; NMR {Mus musculus} SCOP: k.12.1.1

Probab=99.66  E-value=2e-16  Score=105.80  Aligned_cols=83  Identities=20%  Similarity=0.374  Sum_probs=72.1

Q ss_pred             ccCCCCcceeccccccccCChhHHHHHHHhhcCCCCCCCCCCCCCCCCCCccCCCCChhhhccccccCCCCCCCCCCCCc
Q 044013           18 TDAGTGRSYECVFCKRGFTTAQALGGHMNIHRKDRAKNRPPSSSSISDKLTFFPSPSTWDDHQRSVHTNNNNHSNYDSYG   97 (153)
Q Consensus        18 ~~~~gekp~~C~~Cgk~F~~~~~L~~H~r~H~gekp~~C~~c~~~~Cgk~~~F~~~~~L~~H~~~~Ht~~kp~~~~~~~~   97 (153)
                      ....++++|.|.+|++.|.....|..|+++|++++||.|+.|++.       |.....|..|++ +|++++|| .|..|+
T Consensus        10 ~~~~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~C~~~-------f~~~~~l~~H~~-~h~~~~~~-~C~~C~   80 (106)
T 2ee8_A           10 LPSKTKKEFICKFCGRHFTKSYNLLIHERTHTDERPYTCDICHKA-------FRRQDHLRDHRY-IHSKEKPF-KCQECG   80 (106)
T ss_dssp             CCCCCCCCCBCSSSCCBCSSHHHHHHHHHHHCCSCCCBCSSSCCB-------CSCHHHHHHHGG-GSCCCCTT-SCSSSC
T ss_pred             CCcCCCcCeECCCCCCccCCHHHHHHHHHHcCCCCCcCCCCccch-------hCCHHHHHHHHH-HhCCCCCe-ECCCcC
Confidence            334457899999999999999999999999999999999966666       999999999999 99999999 799999


Q ss_pred             cccccCCcccchh
Q 044013           98 QNYHQHLNMIGDE  110 (153)
Q Consensus        98 ~~f~~~~~~~~~~  110 (153)
                      +.|.+... +..+
T Consensus        81 ~~f~~~~~-L~~H   92 (106)
T 2ee8_A           81 KGFCQSRT-LAVH   92 (106)
T ss_dssp             CCCSSHHH-HHHH
T ss_pred             CcccCHHH-HHHH
Confidence            99965444 4444

>1x6h_A Transcriptional repressor CTCF; zinc finger protein, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1

Probab=99.66  E-value=7.5e-17  Score=103.82  Aligned_cols=79  Identities=20%  Similarity=0.310  Sum_probs=69.9

Q ss_pred             CCCcccccCCCCcceeccccccccCChhHHHHHHHhhcCC----CCCCCCCCCCCCCCCCccCCCCChhhhccccccCCC
Q 044013           12 SSSDDETDAGTGRSYECVFCKRGFTTAQALGGHMNIHRKD----RAKNRPPSSSSISDKLTFFPSPSTWDDHQRSVHTNN   87 (153)
Q Consensus        12 ~~~h~~~~~~gekp~~C~~Cgk~F~~~~~L~~H~r~H~ge----kp~~C~~c~~~~Cgk~~~F~~~~~L~~H~~~~Ht~~   87 (153)
                      |.+|++.+++ ++||.|.+|++.|.....|..|+++|...    +||.|..|++.       |.....|..|++ +|+++
T Consensus         3 ~~~H~~~H~~-~k~~~C~~C~~~f~~~~~l~~H~~~~~~~~~~~~~~~C~~C~~~-------f~~~~~L~~H~~-~h~~~   73 (86)
T 1x6h_A            3 SGSSGRTHTG-EKPYACSHCDKTFRQKQLLDMHFKRYHDPNFVPAAFVCSKCGKT-------FTRRNTMARHAD-NCAGP   73 (86)
T ss_dssp             TTCCSTTCCC-CCCEECSSSSCEESSHHHHHHHHHHTTCSSCCCCCEECSSSCCE-------ESCHHHHHHHHH-HCCCC
T ss_pred             cccccceecC-CCCCcCCCCCCccCCHHHHHHHHHHhcCCcCCCcceECCCCCCh-------hCCHHHHHHHHH-HccCC
Confidence            6788888876 89999999999999999999999887765    79999966665       999999999999 99999


Q ss_pred             CCCCCCCCCcccc
Q 044013           88 NNHSNYDSYGQNY  100 (153)
Q Consensus        88 kp~~~~~~~~~~f  100 (153)
                      +++ .|..|+.+|
T Consensus        74 ~~~-~~~~~~~~~   85 (86)
T 1x6h_A           74 DGV-EGENSGPSS   85 (86)
T ss_dssp             CSC-CCCCCCCCC
T ss_pred             CCc-ccCCCCCCC
Confidence            999 678888764

>2lce_A B-cell lymphoma 6 protein; structural genomics, northeast structural genomics consortiu PSI-biology, protein structure initiative; NMR {Homo sapiens}

Probab=99.66  E-value=2.9e-17  Score=103.64  Aligned_cols=63  Identities=19%  Similarity=0.463  Sum_probs=58.2

Q ss_pred             CCCCcceeccccccccCChhHHHHHHHhhcCCCCCCCCCCCCCCCCCCccCCCCChhhhccccccCCCCCC
Q 044013           20 AGTGRSYECVFCKRGFTTAQALGGHMNIHRKDRAKNRPPSSSSISDKLTFFPSPSTWDDHQRSVHTNNNNH   90 (153)
Q Consensus        20 ~~gekp~~C~~Cgk~F~~~~~L~~H~r~H~gekp~~C~~c~~~~Cgk~~~F~~~~~L~~H~~~~Ht~~kp~   90 (153)
                      ..++++|.|.+|++.|.....|..|+++|++++||.|..|++.       |.....|..|++ +|++++||
T Consensus        12 ~~~~~~~~C~~C~k~f~~~~~l~~H~~~H~~~~~~~C~~C~k~-------f~~~~~L~~H~~-~H~~~kp~   74 (74)
T 2lce_A           12 THSDKPYKCDRCQASFRYKGNLASHKTVHTGEKPYRCNICGAQ-------FNRPANLKTHTR-IHSGEKPY   74 (74)
T ss_dssp             CCCCCSBCCTTSSCCBSCHHHHHHHHHHHCCCCSEECTTTCCE-------ESCHHHHHHHHH-HHCCSCCC
T ss_pred             cCCCCCeECCCCCceeCCHHHHHHHHHHcCCCCCEECCCCCch-------hCCHHHHHHHHH-hcCCCCCC
Confidence            3458899999999999999999999999999999999966666       999999999999 99999997

>2yt9_A Zinc finger-containing protein 1; C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1 g.37.1.1

Probab=99.65  E-value=3.7e-17  Score=107.28  Aligned_cols=81  Identities=17%  Similarity=0.291  Sum_probs=71.3

Q ss_pred             CCCcceeccccccccCChhHHHHHHHhhcCCCCCCCCCCCCCCCCCCccCCCCChhhhccccccCCC--CCCCCCCCCcc
Q 044013           21 GTGRSYECVFCKRGFTTAQALGGHMNIHRKDRAKNRPPSSSSISDKLTFFPSPSTWDDHQRSVHTNN--NNHSNYDSYGQ   98 (153)
Q Consensus        21 ~gekp~~C~~Cgk~F~~~~~L~~H~r~H~gekp~~C~~c~~~~Cgk~~~F~~~~~L~~H~~~~Ht~~--kp~~~~~~~~~   98 (153)
                      .++++|.|.+|++.|.....|..|+++|++++||.|+.|++.       |.....|..|++ +|+++  +|| .|..|++
T Consensus         3 ~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~C~~~-------f~~~~~l~~H~~-~h~~~~~~~~-~C~~C~~   73 (95)
T 2yt9_A            3 SGSSGVACEICGKIFRDVYHLNRHKLSHSGEKPYSCPVCGLR-------FKRKDRMSYHVR-SHDGSVGKPY-ICQSCGK   73 (95)
T ss_dssp             CCCSCEECSSSCCEESSSHHHHHHHHHSCSSCSEECSSSCCE-------ESCHHHHHHHHH-HHCCCCCSSB-CCSSSCC
T ss_pred             CCCCCeECCCCCCccCChHHHHHHHHhcCCCCCCcCCCCCCc-------cCCHHHHHHHHH-HhcCCCCCce-ECCCccc
Confidence            468999999999999999999999999999999999966666       999999999999 99987  899 7999999


Q ss_pred             ccccCCcccchhh
Q 044013           99 NYHQHLNMIGDEI  111 (153)
Q Consensus        99 ~f~~~~~~~~~~~  111 (153)
                      .|.+... +..++
T Consensus        74 ~f~~~~~-L~~H~   85 (95)
T 2yt9_A           74 GFSRPDH-LNGHI   85 (95)
T ss_dssp             CBSSHHH-HHHHH
T ss_pred             hhCCHHH-HHHHH
Confidence            9965544 55553

>2lt7_A Transcriptional regulator kaiso; zinc finger, double helix, metal binding protein-DNA complex; HET: DNA; NMR {Homo sapiens} PDB: 4f6m_A* 4f6n_A*

Probab=99.64  E-value=9.6e-18  Score=118.43  Aligned_cols=81  Identities=14%  Similarity=0.158  Sum_probs=70.0

Q ss_pred             CCCcccccCCCCcceeccccccccCChhHHHHHHHhhcCCCCCCCCCCCCCCCCCCccCCCCChhhhccccccCCCCCCC
Q 044013           12 SSSDDETDAGTGRSYECVFCKRGFTTAQALGGHMNIHRKDRAKNRPPSSSSISDKLTFFPSPSTWDDHQRSVHTNNNNHS   91 (153)
Q Consensus        12 ~~~h~~~~~~gekp~~C~~Cgk~F~~~~~L~~H~r~H~gekp~~C~~c~~~~Cgk~~~F~~~~~L~~H~~~~Ht~~kp~~   91 (153)
                      |..|++.+++ ++||.|++|++.|.....|..|+++|++++||.|+.|++.       |.....|..|++ +|++++|+.
T Consensus        38 L~~H~~~H~~-~k~~~C~~C~k~F~~~~~L~~H~~~H~~~k~~~C~~C~k~-------F~~~~~L~~H~~-~hh~~~p~~  108 (133)
T 2lt7_A           38 LRRHFNIHSW-EKKYPCRYCEKVFPLAEYRTKHEIHHTGERRYQCLACGKS-------FINYQFMSSHIK-SVHSQDPSG  108 (133)
T ss_dssp             HHHHHHHHHC-CSCEECSSSSCEESSHHHHHHHHHHHHTCCCEEESSSCCE-------ESSHHHHHHHHH-HHTCCCTTS
T ss_pred             HHHHHHHcCC-CCCeeCCccCeecccccchhhhccccCCCccccCCCCCCC-------cCCHHHHHHHhH-HhcCCCCCC
Confidence            6677777765 8999999999999999999999999999999999966555       999999999999 888776642


Q ss_pred             -----CCCCCccccc
Q 044013           92 -----NYDSYGQNYH  101 (153)
Q Consensus        92 -----~~~~~~~~f~  101 (153)
                           .|..|++.|.
T Consensus       109 ~~k~~~C~~C~k~~~  123 (133)
T 2lt7_A          109 DSKLYRLHPCRSLQI  123 (133)
T ss_dssp             SSCCEEECCCCSSCC
T ss_pred             CCCCeecCCCCchhh
Confidence                 5788888874

>2dmd_A Zinc finger protein 64, isoforms 1 and 2; ZNF338, nuclear protein, DNA- binding, transcription, C2H2-type zinc finger, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1 g.37.1.1

Probab=99.63  E-value=6.5e-17  Score=106.29  Aligned_cols=80  Identities=15%  Similarity=0.281  Sum_probs=70.7

Q ss_pred             CCCcceeccccccccCChhHHHHHHHhhcCCCCCCCCCCCCCCCCCCccCCCCChhhhccccccCCCCCCCCCCCCcccc
Q 044013           21 GTGRSYECVFCKRGFTTAQALGGHMNIHRKDRAKNRPPSSSSISDKLTFFPSPSTWDDHQRSVHTNNNNHSNYDSYGQNY  100 (153)
Q Consensus        21 ~gekp~~C~~Cgk~F~~~~~L~~H~r~H~gekp~~C~~c~~~~Cgk~~~F~~~~~L~~H~~~~Ht~~kp~~~~~~~~~~f  100 (153)
                      ++++||.|.+|++.|.....|..|+++|.+++||.|+.|++.       |.....|..|++ +|++++|| .|.+|++.|
T Consensus         4 ~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~C~~~-------f~~~~~l~~H~~-~h~~~~~~-~C~~C~~~f   74 (96)
T 2dmd_A            4 GSSGPHKCEVCGKCFSRKDKLKTHMRCHTGVKPYKCKTCDYA-------AADSSSLNKHLR-IHSDERPF-KCQICPYAS   74 (96)
T ss_dssp             CCCCCCCBTTTTBCCCCHHHHHHHGGGCCCCCSEECSSSCCE-------ESSHHHHHHHHH-HSCCCCCE-ECSSSSCEE
T ss_pred             CCCcCeECCCCCCccCCHHHHHHHHHhcCCCCCEeCCCCCCc-------cCCHHHHHHHHH-HhCCCCCc-cCCCCCCcc
Confidence            458899999999999999999999999999999999966665       999999999999 99999999 799999999


Q ss_pred             ccCCcccchh
Q 044013          101 HQHLNMIGDE  110 (153)
Q Consensus       101 ~~~~~~~~~~  110 (153)
                      ..... +..+
T Consensus        75 ~~~~~-l~~H   83 (96)
T 2dmd_A           75 RNSSQ-LTVH   83 (96)
T ss_dssp             SSHHH-HHHH
T ss_pred             CCHHH-HHHH
Confidence            55444 4444

>2ghf_A ZHX1, zinc fingers and homeoboxes protein 1; C2H2 zinc fingers, 4-stranded parallel/anti-parallel beta- sheet, structural genomics; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1

Probab=99.63  E-value=6.7e-17  Score=109.45  Aligned_cols=71  Identities=13%  Similarity=0.191  Sum_probs=61.0

Q ss_pred             cccCCCCcceeccccccccCChhHHHHHHH-hh---cCCCCCCCCCCCCCCCCCCccCCCCChhhhc-cccccCCCCCCC
Q 044013           17 ETDAGTGRSYECVFCKRGFTTAQALGGHMN-IH---RKDRAKNRPPSSSSISDKLTFFPSPSTWDDH-QRSVHTNNNNHS   91 (153)
Q Consensus        17 ~~~~~gekp~~C~~Cgk~F~~~~~L~~H~r-~H---~gekp~~C~~c~~~~Cgk~~~F~~~~~L~~H-~~~~Ht~~kp~~   91 (153)
                      .....|++||.|.+|++.|.....|..|++ +|   ++++||.|..|++.       |.....|..| ++ +|++++|| 
T Consensus        10 ~~~~~gekpy~C~~Cgk~F~~~~~L~~H~r~~H~~~~~ekpf~C~~Cgk~-------F~~~~~L~~H~~r-~Htgekpy-   80 (102)
T 2ghf_A           10 QQNKKVEGGYECKYCTFQTPDLNMFTFHVDSEHPNVVLNSSYVCVECNFL-------TKRYDALSEHNLK-YHPGEENF-   80 (102)
T ss_dssp             TTCCCCCSSEECSSCSCEESCHHHHHHHHHHHCSSCCCSCCEEETTTTEE-------ESSTHHHHTHHHH-TSTTCCCE-
T ss_pred             cccCCCCcCcCCCCCCCccCCHHHHHHHHHhhCCCCCCCCCcCCCCCCcc-------cCCHHHHHHHHHH-hcCCCCCe-
Confidence            344456999999999999999999999998 59   67899999965555       9999999999 78 99999999 


Q ss_pred             CCCCC
Q 044013           92 NYDSY   96 (153)
Q Consensus        92 ~~~~~   96 (153)
                      .|.++
T Consensus        81 ~C~~~   85 (102)
T 2ghf_A           81 KLTMV   85 (102)
T ss_dssp             EEEEC
T ss_pred             eCCcc
Confidence            56543

>2csh_A Zinc finger protein 297B; ZF-C2H2 domain, zinc finger and BTB domain containing protein 22B, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1

Probab=99.62  E-value=2.2e-16  Score=106.45  Aligned_cols=79  Identities=16%  Similarity=0.264  Sum_probs=69.8

Q ss_pred             CCCcceeccccccccCChhHHHHHHHhhcCCCCCCCCCCCCCCCCCCccCCCCChhhhccccccCCCCCCCCCCCCcccc
Q 044013           21 GTGRSYECVFCKRGFTTAQALGGHMNIHRKDRAKNRPPSSSSISDKLTFFPSPSTWDDHQRSVHTNNNNHSNYDSYGQNY  100 (153)
Q Consensus        21 ~gekp~~C~~Cgk~F~~~~~L~~H~r~H~gekp~~C~~c~~~~Cgk~~~F~~~~~L~~H~~~~Ht~~kp~~~~~~~~~~f  100 (153)
                      .+++||.| .|++.|.....|..|+++|.+++||.|+.|++.       |.....|..|++ +|++++|| .|..|++.|
T Consensus         6 ~~~k~~~C-~C~~~f~~~~~l~~H~~~h~~~~~~~C~~C~~~-------f~~~~~l~~H~~-~h~~~~~~-~C~~C~~~f   75 (110)
T 2csh_A            6 SGDKLYPC-QCGKSFTHKSQRDRHMSMHLGLRPYGCGVCGKK-------FKMKHHLVGHMK-IHTGIKPY-ECNICAKRF   75 (110)
T ss_dssp             CCCCCEEC-TTSCEESSHHHHHHHHHHHSCCCSEECTTTSCE-------ESSSHHHHHHHT-TTCCCCCE-ECSSSCCEE
T ss_pred             CCCCCEec-cCCCccCCHHHHHHHHHHcCCCcCccCCCCCcc-------cCCHHHHHHHHH-HcCCCCCe-eCCCCcchh
Confidence            35899999 999999999999999999999999999966666       999999999999 99999999 799999999


Q ss_pred             ccCCcccchh
Q 044013          101 HQHLNMIGDE  110 (153)
Q Consensus       101 ~~~~~~~~~~  110 (153)
                      .+... +..+
T Consensus        76 ~~~~~-l~~H   84 (110)
T 2csh_A           76 MWRDS-FHRH   84 (110)
T ss_dssp             SCHHH-HHHH
T ss_pred             cCHHH-HHHH
Confidence            65444 4443

>1a1h_A QGSR zinc finger peptide; complex (zinc finger/DNA), DNA-binding protein, transcription/DNA complex; HET: DNA; 1.60A {Mus musculus} SCOP: g.37.1.1 g.37.1.1 g.37.1.1 PDB: 1jk2_A 1jk1_A 1a1g_A* 1a1f_A* 1a1i_A* 1a1j_A* 1a1k_A* 1aay_A* 1a1l_A* 1p47_A 1zaa_C* 1g2f_C 1g2d_C

Probab=99.61  E-value=8.7e-17  Score=104.35  Aligned_cols=79  Identities=22%  Similarity=0.395  Sum_probs=68.2

Q ss_pred             CCcceecc--ccccccCChhHHHHHHHhhcCCCCCCCCCCCCCCCCCCccCCCCChhhhccccccCCCCCCCCCCCCccc
Q 044013           22 TGRSYECV--FCKRGFTTAQALGGHMNIHRKDRAKNRPPSSSSISDKLTFFPSPSTWDDHQRSVHTNNNNHSNYDSYGQN   99 (153)
Q Consensus        22 gekp~~C~--~Cgk~F~~~~~L~~H~r~H~gekp~~C~~c~~~~Cgk~~~F~~~~~L~~H~~~~Ht~~kp~~~~~~~~~~   99 (153)
                      |++||.|.  .|++.|.....|..|+++|++++||.|+.|++.       |.....|..|++ +|++++|| .|..|++.
T Consensus         1 ~~k~~~C~~~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~C~~~-------f~~~~~l~~H~~-~h~~~~~~-~C~~C~~~   71 (90)
T 1a1h_A            1 MERPYACPVESCDRRFSQSGSLTRHIRIHTGQKPFQCRICMRN-------FSRSDHLTTHIR-THTGEKPF-ACDICGRK   71 (90)
T ss_dssp             --CCEECCSSSCCCEESSHHHHHHHHHHHHCCCCEECTTTCCE-------ESCHHHHHHHHH-HHHCCCCE-ECTTTCCE
T ss_pred             CCCceECCCCCCCCccCCHHHHHHHHHHhCCCCCccCCCCCcc-------cCCHHHHHHHHH-HcCCCCCc-cCCCCCch
Confidence            47899998  599999999999999999999999999966666       999999999999 99999999 79999999


Q ss_pred             cccCCcccchh
Q 044013          100 YHQHLNMIGDE  110 (153)
Q Consensus       100 f~~~~~~~~~~  110 (153)
                      |..... +..+
T Consensus        72 f~~~~~-l~~H   81 (90)
T 1a1h_A           72 FARSDE-RKRH   81 (90)
T ss_dssp             ESSHHH-HHHH
T ss_pred             hCCHHH-HHHH
Confidence            965444 4443

>1ubd_C Protein (YY1 zinc finger domain); transcription initiation, initiator element, zinc finger protein, DNA- protein recognition; HET: DNA; 2.50A {Homo sapiens} SCOP: g.37.1.1 g.37.1.1 g.37.1.1 g.37.1.1 PDB: 1znm_A*

Probab=99.61  E-value=1e-16  Score=110.02  Aligned_cols=87  Identities=17%  Similarity=0.256  Sum_probs=74.5

Q ss_pred             CCCcccccCCCCcceeccccccccCChhHHHHHHHhhcCCCCCCCCC--CCCCCCCCCccCCCCChhhhccccccCCCCC
Q 044013           12 SSSDDETDAGTGRSYECVFCKRGFTTAQALGGHMNIHRKDRAKNRPP--SSSSISDKLTFFPSPSTWDDHQRSVHTNNNN   89 (153)
Q Consensus        12 ~~~h~~~~~~gekp~~C~~Cgk~F~~~~~L~~H~r~H~gekp~~C~~--c~~~~Cgk~~~F~~~~~L~~H~~~~Ht~~kp   89 (153)
                      |..|++.+  ++++|.|.+|++.|.....|..|+++|++++||.|+.  |++.       |.....|..|++ +|++++|
T Consensus        23 l~~H~~~h--~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~~~C~~~-------f~~~~~l~~H~~-~h~~~~~   92 (124)
T 1ubd_C           23 MRKHLHTH--GPRVHVCAECGKAFVESSKLKRHQLVHTGEKPFQCTFEGCGKR-------FSLDFNLRTHVR-IHTGDRP   92 (124)
T ss_dssp             HHHHHGGG--SCCCEECTTTCCEESSHHHHHHHGGGTSCCCCEECCSTTCCCE-------ESCHHHHHHHHH-HHHCCCC
T ss_pred             HHHHHHHc--CCCCeECCCCCchhCCHHHHHHHHHHcCCCCCeeCCCCCCcCc-------cCCHHHHHHHHH-HhCCCCc
Confidence            55677666  6889999999999999999999999999999999974  6555       999999999999 9999999


Q ss_pred             CCCCC--CCccccccCCcccchh
Q 044013           90 HSNYD--SYGQNYHQHLNMIGDE  110 (153)
Q Consensus        90 ~~~~~--~~~~~f~~~~~~~~~~  110 (153)
                      | .|.  .|++.|.+... +..+
T Consensus        93 ~-~C~~~~C~~~f~~~~~-L~~H  113 (124)
T 1ubd_C           93 Y-VCPFDGCNKKFAQSTN-LKSH  113 (124)
T ss_dssp             C-CCCSTTCCCCCSSTTT-THHH
T ss_pred             e-ECCCCCCCCccCCHHH-HHHH
Confidence            9 675  59999966555 5444

>2lv2_A Insulinoma-associated protein 1; structural genomics, northeast structural genomics consortiu PSI-biology, protein structure initiative; NMR {Homo sapiens}

Probab=99.60  E-value=3.8e-16  Score=102.41  Aligned_cols=60  Identities=17%  Similarity=0.283  Sum_probs=54.1

Q ss_pred             CCcceeccccccccCChhHHHHHHHhhcCCCCCCCCCCCCCCCCCCccCCCCChhhhccccccCCCC
Q 044013           22 TGRSYECVFCKRGFTTAQALGGHMNIHRKDRAKNRPPSSSSISDKLTFFPSPSTWDDHQRSVHTNNN   88 (153)
Q Consensus        22 gekp~~C~~Cgk~F~~~~~L~~H~r~H~gekp~~C~~c~~~~Cgk~~~F~~~~~L~~H~~~~Ht~~k   88 (153)
                      +.++|.|++|++.|.....|..|+++|++++||.|+.|++.       |.+...|..|++.+|+++.
T Consensus        25 ~~~~h~C~~Cgk~F~~~~~L~~H~~~H~~~k~~~C~~C~k~-------F~~~~~L~~H~~~~H~~E~   84 (85)
T 2lv2_A           25 SAECHLCPVCGESFASKGAQERHLRLLHAAQVFPCKYCPAT-------FYSSPGLTRHINKCHPSEN   84 (85)
T ss_dssp             CCTTEECTTSCCEESSHHHHHHHHHTTSCSSSEECTTSSCE-------ESSHHHHHHHHHTTCTTCC
T ss_pred             CCCCEECCCCCCCcCcHHHHhhhhhhccCCCccCCCCCCCE-------eCCHHHHHHhCcccCcCCC
Confidence            46889999999999999999999999999999999966666       9999999999854898874

>2kmk_A Zinc finger protein GFI-1; tandem repeat zinc finger domain, protein-DNA complex, DNA-B metal-binding, nucleus; HET: DNA; NMR {Rattus norvegicus}

Probab=99.59  E-value=1.6e-16  Score=101.29  Aligned_cols=72  Identities=25%  Similarity=0.488  Sum_probs=65.5

Q ss_pred             ceeccccccccCChhHHHHHHHhhcCCCCCCCCCCCCCCCCCCccCCCCChhhhccccccCCCCCCCCCCCCccccccCC
Q 044013           25 SYECVFCKRGFTTAQALGGHMNIHRKDRAKNRPPSSSSISDKLTFFPSPSTWDDHQRSVHTNNNNHSNYDSYGQNYHQHL  104 (153)
Q Consensus        25 p~~C~~Cgk~F~~~~~L~~H~r~H~gekp~~C~~c~~~~Cgk~~~F~~~~~L~~H~~~~Ht~~kp~~~~~~~~~~f~~~~  104 (153)
                      ||.|.+|++.|.....|..|+++|.+++||.|+.|++.       |.....|..|++ +|++++|| .|..|++.|.+..
T Consensus         1 ~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~C~~~-------f~~~~~l~~H~~-~h~~~~~~-~C~~C~~~f~~~~   71 (82)
T 2kmk_A            1 SFDCKICGKSFKRSSTLSTHLLIHSDTRPYPCQYCGKR-------FHQKSDMKKHTF-IHTGEKPH-KCQVCGKAFSQSS   71 (82)
T ss_dssp             CEECSSSCCEESSHHHHHHHHHHHHTCCCEECSSSCCE-------ESSHHHHHHHHH-HHHTCCCE-ECTTTSCEESSHH
T ss_pred             CccCCCCcccccCchhHHHHHHHcCCCCCeeCCcCChh-------hCCHHHHHHHHH-HhcCCCCC-cCCCcchhhCChH
Confidence            69999999999999999999999999999999966666       999999999999 99999999 7999999995544


Q ss_pred             c
Q 044013          105 N  105 (153)
Q Consensus       105 ~  105 (153)
                      .
T Consensus        72 ~   72 (82)
T 2kmk_A           72 N   72 (82)
T ss_dssp             H
T ss_pred             H
Confidence            3

>1x6e_A Zinc finger protein 24; ZNF24, KOX17, ZNF191, zscan3, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1

Probab=99.59  E-value=3.3e-16  Score=98.31  Aligned_cols=67  Identities=24%  Similarity=0.481  Sum_probs=58.3

Q ss_pred             CcccccCCCCcceeccccccccCChhHHHHHHHhhcCCCCCCCCCCCCCCCCCCccCCCCChhhhccccccCCCCC
Q 044013           14 SDDETDAGTGRSYECVFCKRGFTTAQALGGHMNIHRKDRAKNRPPSSSSISDKLTFFPSPSTWDDHQRSVHTNNNN   89 (153)
Q Consensus        14 ~h~~~~~~gekp~~C~~Cgk~F~~~~~L~~H~r~H~gekp~~C~~c~~~~Cgk~~~F~~~~~L~~H~~~~Ht~~kp   89 (153)
                      .+.+.+++ ++||.|.+|++.|.....|..|+++|++++||.|+.|++.       |.....|..|++ +|+++.+
T Consensus         4 ~~~~~H~~-~k~~~C~~C~k~f~~~~~L~~H~~~h~~~~~~~C~~C~~~-------f~~~~~L~~H~~-~H~~~~~   70 (72)
T 1x6e_A            4 GSSGIHSG-EKPYGCVECGKAFSRSSILVQHQRVHTGEKPYKCLECGKA-------FSQNSGLINHQR-IHTSGPS   70 (72)
T ss_dssp             CCCCTTTT-CCCEECSSSCCEESSHHHHHHHHHGGGCSCCEECSSSCCE-------ESSHHHHHHHHH-HHHSSSS
T ss_pred             CCCcccCC-CCCccCCCCCCccCCHHHHHHHHHhcCCCCCeECCCCCcc-------cCCHHHHHHHHH-hcCCCCC
Confidence            34455554 8999999999999999999999999999999999966666       999999999999 9988653

>1x5w_A Zinc finger protein 64, isoforms 1; ZNF338, nuclear protein, DNA binding, transcription, C2H2 type zinc finger, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1

Probab=99.59  E-value=2.5e-16  Score=98.28  Aligned_cols=63  Identities=22%  Similarity=0.289  Sum_probs=57.9

Q ss_pred             CCCcceeccccccccCChhHHHHHHHhhcCCCCCCCCCCCCCCCCCCccCCCCChhhhccccccCCCCCCC
Q 044013           21 GTGRSYECVFCKRGFTTAQALGGHMNIHRKDRAKNRPPSSSSISDKLTFFPSPSTWDDHQRSVHTNNNNHS   91 (153)
Q Consensus        21 ~gekp~~C~~Cgk~F~~~~~L~~H~r~H~gekp~~C~~c~~~~Cgk~~~F~~~~~L~~H~~~~Ht~~kp~~   91 (153)
                      .+++||.|.+|++.|.....|..|+++|++++||.|+.|++.       |.....|..|++ +|++++|..
T Consensus         5 ~~~~~~~C~~C~k~f~~~~~L~~H~~~H~~~~~~~C~~C~~~-------f~~~~~L~~H~~-~h~~~~p~p   67 (70)
T 1x5w_A            5 SSGHPEKCSECSYSCSSKAALRIHERIHCTDRPFKCNYCSFD-------TKQPSNLSKHMK-KFHGDMSGP   67 (70)
T ss_dssp             CCCCSEECSSSSCEESSHHHHHHHHGGGCCSCSEECSSSSCE-------ESSHHHHHHHHH-HHHSSSCCS
T ss_pred             CCCCCeECCCCCcccCCHHHHHHHHHHcCCCCCEeCCCCCCc-------cCCHHHHHHHHH-HHhCCCCCC
Confidence            458999999999999999999999999999999999966666       999999999999 999998863

>2gqj_A Zinc finger protein KIAA1196; ZF-C2H2 like domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=99.59  E-value=1e-16  Score=106.78  Aligned_cols=72  Identities=15%  Similarity=0.130  Sum_probs=64.2

Q ss_pred             CCCCCcccccCCCCcceeccccccccC-ChhHHHHHHHhhcC-CCCCCCCCCCCCCCCCCccCCCCChhhhccccccCCC
Q 044013           10 SKSSSDDETDAGTGRSYECVFCKRGFT-TAQALGGHMNIHRK-DRAKNRPPSSSSISDKLTFFPSPSTWDDHQRSVHTNN   87 (153)
Q Consensus        10 ~~~~~h~~~~~~gekp~~C~~Cgk~F~-~~~~L~~H~r~H~g-ekp~~C~~c~~~~Cgk~~~F~~~~~L~~H~~~~Ht~~   87 (153)
                      ..+..|++.++. ++||.|.+|++.|. ....|..|+++|++ ++||.|..|++.       |.+...|..|++ +|+++
T Consensus        10 ~~~~~h~~~h~~-~~~~~C~~C~k~f~~~~~~L~~H~~~h~~~~~~~~C~~C~k~-------F~~~~~L~~H~~-~h~~~   80 (98)
T 2gqj_A           10 GPEEQWQRAIHE-RGEAVCPTCNVVTRKTLVGLKKHMEVCQKLQDALKCQHCRKQ-------FKSKAGLNYHTM-AEHSA   80 (98)
T ss_dssp             CSCSHHHHTTTT-TSCCCCTTTCCCCSSCSHHHHHHHHHHHHHHHHHSCSSSCCC-------CSCHHHHHHHHH-HHSCS
T ss_pred             CcHHHHHHHhcc-CCCcCCCCCCCChhhhHHHHHHHHHHHcCCCCCEECCCCCCc-------cCCHHHHHHHHH-HHcCC
Confidence            446667777765 89999999999999 99999999999999 999999966555       999999999999 99999


Q ss_pred             CCC
Q 044013           88 NNH   90 (153)
Q Consensus        88 kp~   90 (153)
                      +|.
T Consensus        81 kp~   83 (98)
T 2gqj_A           81 KPS   83 (98)
T ss_dssp             CSS
T ss_pred             CCC
Confidence            987

>2dlq_A GLI-kruppel family member HKR3; ZF-C2H2 domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Mus musculus} SCOP: g.37.1.1 g.37.1.1 g.37.1.1 g.37.1.1

Probab=99.58  E-value=9.7e-17  Score=109.70  Aligned_cols=88  Identities=16%  Similarity=0.256  Sum_probs=60.2

Q ss_pred             CCCcccccCCCCcceeccccccccCChhHHHHHHHh---hcCCCCCCCCCCCCCCCCCCccCCCCChhhhccccccCCCC
Q 044013           12 SSSDDETDAGTGRSYECVFCKRGFTTAQALGGHMNI---HRKDRAKNRPPSSSSISDKLTFFPSPSTWDDHQRSVHTNNN   88 (153)
Q Consensus        12 ~~~h~~~~~~gekp~~C~~Cgk~F~~~~~L~~H~r~---H~gekp~~C~~c~~~~Cgk~~~F~~~~~L~~H~~~~Ht~~k   88 (153)
                      |..|++.+.. ++||.|.+|++.|.+...|..|++.   |.+++||.|+.|++.       |.....|..|++ +|++++
T Consensus        23 l~~H~~~h~~-~~~~~C~~C~~~f~~~~~l~~H~~~~~~~~~~~~~~C~~C~~~-------f~~~~~l~~H~~-~h~~~~   93 (124)
T 2dlq_A           23 LKVHNRKHTG-EKPFECPKCGKCYFRKENLLEHEARNCMNRSEQVFTCSVCQET-------FRRRMELRLHMV-SHTGEM   93 (124)
T ss_dssp             HHHHHHHHSS-CCSCBCTTTCCBCSSHHHHHHHHHHCCCCSCCCCEECSSSCCE-------ESSHHHHHHHHH-HHSSSC
T ss_pred             HHHHHHhCCC-CCCeECCCCCchhcCHHHHHHHHhhhhcCCCCCCeECCCCCCc-------cCCHHHHHHHHH-HcCCCC
Confidence            4455555544 6677777777777777777777774   466777777744444       888888888887 888888


Q ss_pred             CCCCCCCCccccccCCcccchh
Q 044013           89 NHSNYDSYGQNYHQHLNMIGDE  110 (153)
Q Consensus        89 p~~~~~~~~~~f~~~~~~~~~~  110 (153)
                      || .|..|++.|.+... +..+
T Consensus        94 ~~-~C~~C~~~f~~~~~-l~~H  113 (124)
T 2dlq_A           94 PY-KCSSCSQQFMQKKD-LQSH  113 (124)
T ss_dssp             SE-ECSSSCCEESSHHH-HHHH
T ss_pred             Cc-cCCCccchhCCHHH-HHHH
Confidence            88 67788888754443 4444

>2jp9_A Wilms tumor 1; DNA binding, nucleic acid recognition, X-RAY; HET: DNA; NMR {Homo sapiens} PDB: 2jpa_A* 2prt_A*

Probab=99.58  E-value=9.2e-17  Score=109.22  Aligned_cols=82  Identities=18%  Similarity=0.362  Sum_probs=65.8

Q ss_pred             CCCcccccCCCCcceecc--ccccccCChhHHHHHHHhhcCCCCCCCCCCCCCCCCCCccCCCCChhhhccccccCCCCC
Q 044013           12 SSSDDETDAGTGRSYECV--FCKRGFTTAQALGGHMNIHRKDRAKNRPPSSSSISDKLTFFPSPSTWDDHQRSVHTNNNN   89 (153)
Q Consensus        12 ~~~h~~~~~~gekp~~C~--~Cgk~F~~~~~L~~H~r~H~gekp~~C~~c~~~~Cgk~~~F~~~~~L~~H~~~~Ht~~kp   89 (153)
                      |..|++.+.+ ++||.|.  .|++.|.....|..|+++|++++||.|+.|++.       |.....|..|++ +|++++|
T Consensus        24 l~~H~~~h~~-~~~~~C~~~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~C~~~-------f~~~~~l~~H~~-~h~~~~~   94 (119)
T 2jp9_A           24 LQMHSRKHTG-EKPYQCDFKDCERRFSRSDQLKRHQRRHTGVKPFQCKTCQRK-------FSRSDHLKTHTR-THTGEKP   94 (119)
T ss_dssp             HHHHHHHHHT-TCCEECCSTTCCCEESSHHHHHHHHHHHHCCCCEECTTTCCE-------ESCHHHHHHHHH-HHHTCCC
T ss_pred             HHHHHHhhCC-CCCccCCCCCCcCccCCHHHHHHHHHHcCCCCCccCCccCch-------hCCHHHHHHHHH-HhcCCCC
Confidence            4556666554 7788888  699999888889999888888888888855555       888889999988 8888888


Q ss_pred             CCCC--CCCccccccC
Q 044013           90 HSNY--DSYGQNYHQH  103 (153)
Q Consensus        90 ~~~~--~~~~~~f~~~  103 (153)
                      | .|  ..|++.|...
T Consensus        95 ~-~C~~~~C~~~f~~~  109 (119)
T 2jp9_A           95 F-SCRWPSCQKKFARS  109 (119)
T ss_dssp             E-ECCSTTCCCEESSH
T ss_pred             e-eCCCCCCccccCCH
Confidence            8 56  7888888543

>2ct1_A Transcriptional repressor CTCF; CCCTC-BINDING factor, zinc finger, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1

Probab=99.57  E-value=1e-15  Score=97.20  Aligned_cols=72  Identities=24%  Similarity=0.411  Sum_probs=62.1

Q ss_pred             CCCCcccccCCCCcceeccccccccCChhHHHHHHH-hhcCC-CCCCCCCCCCCCCCCCccCCCCChhhhccccccCCCC
Q 044013           11 KSSSDDETDAGTGRSYECVFCKRGFTTAQALGGHMN-IHRKD-RAKNRPPSSSSISDKLTFFPSPSTWDDHQRSVHTNNN   88 (153)
Q Consensus        11 ~~~~h~~~~~~gekp~~C~~Cgk~F~~~~~L~~H~r-~H~ge-kp~~C~~c~~~~Cgk~~~F~~~~~L~~H~~~~Ht~~k   88 (153)
                      .|.+|++++++ ++||.|.+|++.|.....|..|++ .|+++ +||.|+.|++.       |.....|..|++..|..+.
T Consensus         2 s~~~H~~~H~~-~k~~~C~~C~k~f~~~~~L~~H~~~~h~~~~~~~~C~~C~~~-------f~~~~~L~~H~~~~H~~~~   73 (77)
T 2ct1_A            2 SSGSSGRTHSG-EKPYECYICHARFTQSGTMKMHILQKHTENVAKFHCPHCDTV-------IARKSDLGVHLRKQHSYSG   73 (77)
T ss_dssp             CCCCCCCCCSC-CCSEECTTTCCEESCHHHHHHHHHHHSSSSCSSEECSSSSCE-------ESSHHHHHHHHHHTSCCSC
T ss_pred             CCCccccccCC-CCCeECCCcCchhCCHHHHHHHHHHhcCCCCCccCCCCCCCc-------cCCHHHHHHHHHHhCCCCC
Confidence            36789998877 899999999999999999999997 78875 89999966655       9999999999984576676


Q ss_pred             CC
Q 044013           89 NH   90 (153)
Q Consensus        89 p~   90 (153)
                      |.
T Consensus        74 p~   75 (77)
T 2ct1_A           74 PS   75 (77)
T ss_dssp             CC
T ss_pred             CC
Confidence            65

>2i13_A AART; DNA binding, zinc finger, DNA binding protein-DNA complex; 1.96A {Mus musculus} SCOP: k.12.1.1 PDB: 1mey_C*

Probab=99.56  E-value=1.5e-16  Score=116.85  Aligned_cols=79  Identities=23%  Similarity=0.493  Sum_probs=47.6

Q ss_pred             CcccccCCCCcceeccccccccCChhHHHHHHHhhcCCCCCCCCCCCCCCCCCCccCCCCChhhhccccccCCCCCCCCC
Q 044013           14 SDDETDAGTGRSYECVFCKRGFTTAQALGGHMNIHRKDRAKNRPPSSSSISDKLTFFPSPSTWDDHQRSVHTNNNNHSNY   93 (153)
Q Consensus        14 ~h~~~~~~gekp~~C~~Cgk~F~~~~~L~~H~r~H~gekp~~C~~c~~~~Cgk~~~F~~~~~L~~H~~~~Ht~~kp~~~~   93 (153)
                      .|++.+.+ ++||.|.+|++.|.....|..|+++|++++||.|+.|++.       |.....|..|++ +|++++|| .|
T Consensus        95 ~H~~~h~~-~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~C~~~-------f~~~~~L~~H~~-~H~~~~~~-~C  164 (190)
T 2i13_A           95 AHQRTHTG-EKPYACPECGKSFSQLAHLRAHQRTHTGEKPYKCPECGKS-------FSREDNLHTHQR-THTGEKPY-KC  164 (190)
T ss_dssp             HHHHHHHT-CCCEECTTTCCEESSHHHHHHHHHHHHCCCCEECTTTCCE-------ESCHHHHHHHHH-HHHCCCCE-EC
T ss_pred             HHHHhcCC-CCCCcCCCCCCccCCHHHHHHHHHHhCCCCCeECCCCCcc-------cCCHHHHHHHHH-hcCCCCCe-EC
Confidence            34444333 5566666666666666666666666666666666644433       666666666666 66666666 56


Q ss_pred             CCCcccccc
Q 044013           94 DSYGQNYHQ  102 (153)
Q Consensus        94 ~~~~~~f~~  102 (153)
                      ..|++.|..
T Consensus       165 ~~C~~~f~~  173 (190)
T 2i13_A          165 PECGKSFSR  173 (190)
T ss_dssp             TTTCCEESS
T ss_pred             CCCCCccCC
Confidence            666666643

>2ee8_A Protein ODD-skipped-related 2; zinc binding, ZF-C2H2 domain, structural genomics, NPPSFA; NMR {Mus musculus} SCOP: k.12.1.1

Probab=99.56  E-value=9e-16  Score=102.64  Aligned_cols=71  Identities=21%  Similarity=0.403  Sum_probs=63.6

Q ss_pred             CCCcccccCCCCcceeccccccccCChhHHHHHHHhhcCCCCCCCCCCCCCCCCCCccCCCCChhhhccccccCCCCCCC
Q 044013           12 SSSDDETDAGTGRSYECVFCKRGFTTAQALGGHMNIHRKDRAKNRPPSSSSISDKLTFFPSPSTWDDHQRSVHTNNNNHS   91 (153)
Q Consensus        12 ~~~h~~~~~~gekp~~C~~Cgk~F~~~~~L~~H~r~H~gekp~~C~~c~~~~Cgk~~~F~~~~~L~~H~~~~Ht~~kp~~   91 (153)
                      |..|++.+.. ++||.|.+|++.|.....|..|+++|++++||.|..|++.       |.....|..|++ +|++++||.
T Consensus        33 l~~H~~~h~~-~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~C~~~-------f~~~~~L~~H~~-~H~~~~~~~  103 (106)
T 2ee8_A           33 LLIHERTHTD-ERPYTCDICHKAFRRQDHLRDHRYIHSKEKPFKCQECGKG-------FCQSRTLAVHKT-LHMQTSSPT  103 (106)
T ss_dssp             HHHHHHHHCC-SCCCBCSSSCCBCSCHHHHHHHGGGSCCCCTTSCSSSCCC-------CSSHHHHHHHHH-HTTSCCCCC
T ss_pred             HHHHHHHcCC-CCCcCCCCccchhCCHHHHHHHHHHhCCCCCeECCCcCCc-------ccCHHHHHHHHH-HhCCCCCCc
Confidence            5566666655 8899999999999999999999999999999999966665       999999999999 999999984

>1wjp_A Zinc finger protein 295; ZF-C2H2 domain, zinc binding, nucleic acid binding, KIAA1227 protein, structural genomics; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1 g.37.1.1

Probab=99.54  E-value=1.3e-15  Score=102.37  Aligned_cols=86  Identities=19%  Similarity=0.283  Sum_probs=72.5

Q ss_pred             CCCcccccCCCCcceeccccccccCChhHHHHHHHhhcCCCCCCCCCCCCCCCCCCccCCCCChhhhccccccCCCCCCC
Q 044013           12 SSSDDETDAGTGRSYECVFCKRGFTTAQALGGHMNIHRKDRAKNRPPSSSSISDKLTFFPSPSTWDDHQRSVHTNNNNHS   91 (153)
Q Consensus        12 ~~~h~~~~~~gekp~~C~~Cgk~F~~~~~L~~H~r~H~gekp~~C~~c~~~~Cgk~~~F~~~~~L~~H~~~~Ht~~kp~~   91 (153)
                      .+++++.+++ ++||.|.+|++.|.....|..|+++|.  +||.|+.|++.       |.....|..|++  |++++|| 
T Consensus         4 ~ss~~~~h~~-~~~~~C~~C~~~f~~~~~l~~H~~~H~--~~~~C~~C~~~-------f~~~~~l~~H~~--H~~~~~~-   70 (107)
T 1wjp_A            4 GSSGASPVEN-KEVYQCRLCNAKLSSLLEQGSHERLCR--NAAVCPYCSLR-------FFSPELKQEHES--KCEYKKL-   70 (107)
T ss_dssp             CCCCCCCCCC-CCCCBCTTTCCBCSSHHHHHHHHHHHH--HSBCCTTTCCC-------BSSHHHHHHHHH--HCSTGGG-
T ss_pred             ccccCcccCC-CcCeECCCCCCccCCHHHHHHHHHHCC--CCccCCCCCCc-------cCCHHHHHHHHH--cCCCCCc-
Confidence            3566677665 889999999999999999999999994  79999966666       999999999984  9999999 


Q ss_pred             CCCCCccccccCCcccchhh
Q 044013           92 NYDSYGQNYHQHLNMIGDEI  111 (153)
Q Consensus        92 ~~~~~~~~f~~~~~~~~~~~  111 (153)
                      .|..|++.|.+... +..++
T Consensus        71 ~C~~C~~~f~~~~~-L~~H~   89 (107)
T 1wjp_A           71 TCLECMRTFKSSFS-IWRHQ   89 (107)
T ss_dssp             EEGGGTEECSSHHH-HHHHH
T ss_pred             cCccccchhCCHHH-HHHHH
Confidence            79999999966555 55543

>3uk3_C Zinc finger protein 217; transcription factor, DNA binding, DNA-metal BI protein complex; 2.10A {Homo sapiens}

Probab=99.54  E-value=7.7e-16  Score=91.98  Aligned_cols=56  Identities=18%  Similarity=0.278  Sum_probs=48.3

Q ss_pred             CCcceeccccccccCChhHHHHHHHhhcCCCCCCCCCCCCCCCCCCccCCCCChhhhccccccC
Q 044013           22 TGRSYECVFCKRGFTTAQALGGHMNIHRKDRAKNRPPSSSSISDKLTFFPSPSTWDDHQRSVHT   85 (153)
Q Consensus        22 gekp~~C~~Cgk~F~~~~~L~~H~r~H~gekp~~C~~c~~~~Cgk~~~F~~~~~L~~H~~~~Ht   85 (153)
                      |++||.|.+|++.|.....|..|+++|++++||.|+.|++.       |.....|..|++ +|.
T Consensus         1 g~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~C~~~-------f~~~~~l~~H~~-~hh   56 (57)
T 3uk3_C            1 GSSSRECSYCGKFFRSNYYLNIHLRTHTGEKPYKCEFCEYA-------AAQKTSLRYHLE-RHH   56 (57)
T ss_dssp             ----CBCTTTCCBCSCHHHHHHHHHHHHCCCCEECSSSSCE-------ESSHHHHHHHHH-HHC
T ss_pred             CCCCccCCCCcchhCChHHHHHHHHHcCCCCCcCCCCCcch-------hCCHHHHHHHHH-Hhc
Confidence            47899999999999999999999999999999999966655       999999999998 664

>2gli_A Protein (five-finger GLI); protein/DNA complex, transcription/DNA complex; HET: DNA; 2.60A {Homo sapiens} SCOP: g.37.1.1 g.37.1.1 g.37.1.1 g.37.1.1 g.37.1.1

Probab=99.54  E-value=9.9e-16  Score=108.69  Aligned_cols=60  Identities=18%  Similarity=0.262  Sum_probs=28.9

Q ss_pred             cccCChhHHHHHHHhhcCCCCCCCCC--CCCCCCCCCccCCCCChhhhccccccCCCCCCCCCCC--Cccccc
Q 044013           33 RGFTTAQALGGHMNIHRKDRAKNRPP--SSSSISDKLTFFPSPSTWDDHQRSVHTNNNNHSNYDS--YGQNYH  101 (153)
Q Consensus        33 k~F~~~~~L~~H~r~H~gekp~~C~~--c~~~~Cgk~~~F~~~~~L~~H~~~~Ht~~kp~~~~~~--~~~~f~  101 (153)
                      +.|.....|..|+++|++++||.|+.  |++.       |.....|..|++ +|++++|| .|..  |++.|.
T Consensus        47 ~~f~~~~~l~~H~~~h~~~~~~~C~~~~C~~~-------f~~~~~l~~H~~-~h~~~~~~-~C~~~~C~~~f~  110 (155)
T 2gli_A           47 RPFKAQYMLVVHMRRHTGEKPHKCTFEGCRKS-------YSRLENLKTHLR-SHTGEKPY-MCEHEGCSKAFS  110 (155)
T ss_dssp             CCCSSHHHHHHHTHHHHCCCCCCCCSTTCCCC-------CSSHHHHHHHHH-HTTTCCCE-ECCSTTCCCEES
T ss_pred             hhhhhHHHHHHHHHhcCCCCCccCCCCCCCCc-------ccCHHHHHHHHH-HcCCCCCe-eCCCCCCCCccC
Confidence            44555555555555555555555542  3333       555555555554 45555554 3444  555543

>2d9h_A Zinc finger protein 692; ZF-C2H2 domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=99.53  E-value=3.2e-15  Score=94.95  Aligned_cols=63  Identities=14%  Similarity=0.161  Sum_probs=56.9

Q ss_pred             CCcceeccccccccCChhHHHHHHHhhcC---CCCCCCCCCCCCCCCCCccCCCCChhhhccccccCCCCCCC
Q 044013           22 TGRSYECVFCKRGFTTAQALGGHMNIHRK---DRAKNRPPSSSSISDKLTFFPSPSTWDDHQRSVHTNNNNHS   91 (153)
Q Consensus        22 gekp~~C~~Cgk~F~~~~~L~~H~r~H~g---ekp~~C~~c~~~~Cgk~~~F~~~~~L~~H~~~~Ht~~kp~~   91 (153)
                      +++||.|.+|++.|.....|..|+++|++   ++||.|..|++.       |.....|..|++..|.+++|..
T Consensus         4 ~~k~~~C~~C~k~f~~~~~L~~H~~~h~~~~~~~~~~C~~C~k~-------f~~~~~L~~H~~~~H~~~~~~~   69 (78)
T 2d9h_A            4 GSSGLQCEICGFTCRQKASLNWHQRKHAETVAALRFPCEFCGKR-------FEKPDSVAAHRSKSHPALLLAP   69 (78)
T ss_dssp             SCCCEECSSSCCEESSHHHHHHHHHHHHHHTTTCCEECTTTCCE-------ESSHHHHHHHHHHTSTTTSSCC
T ss_pred             CCcCeECCCCCCeeCCHHHHHHHHHHhhccCCCcccCCCCCCch-------hCCHHHHHHHHHHhCCCCCCCc
Confidence            58999999999999999999999999996   899999966666       9999999999954899998874

>2ebt_A Krueppel-like factor 5; C2H2-type zinc-finger, metal BIND, transcription factor, kruppel-like factor, GC-box promoter elements, structural genomics; NMR {Homo sapiens}

Probab=99.52  E-value=7.5e-15  Score=96.86  Aligned_cols=77  Identities=16%  Similarity=0.305  Sum_probs=67.9

Q ss_pred             CCCCcceeccc--cccccCChhHHHHHHHhhcCCCCCCCC--CCCCCCCCCCccCCCCChhhhccccccCCCCCCCCCCC
Q 044013           20 AGTGRSYECVF--CKRGFTTAQALGGHMNIHRKDRAKNRP--PSSSSISDKLTFFPSPSTWDDHQRSVHTNNNNHSNYDS   95 (153)
Q Consensus        20 ~~gekp~~C~~--Cgk~F~~~~~L~~H~r~H~gekp~~C~--~c~~~~Cgk~~~F~~~~~L~~H~~~~Ht~~kp~~~~~~   95 (153)
                      ...+++|.|.+  |++.|.....|..|+++|++++||.|+  .|++.       |.....|..|++ +|++++|| .|..
T Consensus        10 ~~~~~~~~C~~~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~~~C~~~-------f~~~~~l~~H~~-~h~~~~~~-~C~~   80 (100)
T 2ebt_A           10 LEKRRIHYCDYPGCTKVYTKSSHLKAHLRTHTGEKPYKCTWEGCDWR-------FARSDELTRHYR-KHTGAKPF-QCGV   80 (100)
T ss_dssp             CCSCCCEECCSSSCCCEESCHHHHHHHHHHHSCCCCEECCSSSCCCE-------ESSHHHHHHHHH-HHTSCCSC-BCSS
T ss_pred             cccCcceEcCCCCCCCcccCHHHHHHHHHHhCCCCCeeCCCCCCCCc-------cCCHHHHHHHHH-HhCCCCCe-ECCC
Confidence            34467999997  999999999999999999999999996  36555       999999999999 99999999 7999


Q ss_pred             CccccccCCc
Q 044013           96 YGQNYHQHLN  105 (153)
Q Consensus        96 ~~~~f~~~~~  105 (153)
                      |++.|.+...
T Consensus        81 C~~~f~~~~~   90 (100)
T 2ebt_A           81 CNRSFSRSDH   90 (100)
T ss_dssp             SCCBCSSHHH
T ss_pred             CcCccCCHHH
Confidence            9999955443

>1bbo_A Human enhancer-binding protein MBP-1; DNA-binding protein; HET: ABA; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1 PDB: 3znf_A 4znf_A

Probab=99.52  E-value=3.2e-15  Score=89.27  Aligned_cols=56  Identities=18%  Similarity=0.297  Sum_probs=52.0

Q ss_pred             ceeccccccccCChhHHHHHHHhhcCCCCCCCCCCCCCCCCCCccCCCCChhhhccccccCCCC
Q 044013           25 SYECVFCKRGFTTAQALGGHMNIHRKDRAKNRPPSSSSISDKLTFFPSPSTWDDHQRSVHTNNN   88 (153)
Q Consensus        25 p~~C~~Cgk~F~~~~~L~~H~r~H~gekp~~C~~c~~~~Cgk~~~F~~~~~L~~H~~~~Ht~~k   88 (153)
                      ||.|.+|++.|.....|..|+++|++++||.|+.|++.       |.....|..|++ +|++++
T Consensus         1 p~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~C~~~-------f~~~~~l~~H~~-~h~~~k   56 (57)
T 1bbo_A            1 KYICEECGIRXKKPSMLKKHIRTHTDVRPYHCTYCNFS-------FKTKGNLTKHMK-SKAHSK   56 (57)
T ss_dssp             CCBCTTTCCBCSSHHHHHHHHHHTSSCCCEECSSSSCE-------ESSHHHHHHHHH-SSSSCC
T ss_pred             CCcCCCCcCcCCCHHHHHHHHHhcCCCCCccCCCCCch-------hcCHHHHHHHHH-HhcccC
Confidence            79999999999999999999999999999999966666       999999999999 998765

>1llm_C Chimera of ZIF23-GCN4; dimerization, DNA recognition, leucine zipper, X-RAY crystallography, structure-based design, zinc fingers; 1.50A {Mus musculus} SCOP: g.37.1.1 g.37.1.1 PDB: 1xf7_A

Probab=99.51  E-value=7.3e-17  Score=105.05  Aligned_cols=73  Identities=14%  Similarity=0.283  Sum_probs=64.4

Q ss_pred             CcceeccccccccCChhHHHHHHHhhcCCCCCCCCCCCCCCCCCCccCCCCChhhhccccccCCCCCCCCCCCCcccccc
Q 044013           23 GRSYECVFCKRGFTTAQALGGHMNIHRKDRAKNRPPSSSSISDKLTFFPSPSTWDDHQRSVHTNNNNHSNYDSYGQNYHQ  102 (153)
Q Consensus        23 ekp~~C~~Cgk~F~~~~~L~~H~r~H~gekp~~C~~c~~~~Cgk~~~F~~~~~L~~H~~~~Ht~~kp~~~~~~~~~~f~~  102 (153)
                      ++||.|.+|++.|.....|..|+++|++++||.|+.|++.       |.....|..|++ +|.+ .|| .|..|++.|..
T Consensus         1 ek~~~C~~C~k~f~~~~~L~~H~~~H~~~~~~~C~~C~k~-------f~~~~~L~~H~~-~h~~-~~~-~c~~C~~~f~~   70 (88)
T 1llm_C            1 MKPFQCRICMRNFSRSDHLTTHIRTHTGEKPFACDICGRK-------FARSDERKRHRD-IQHI-LPI-LEDKVEELLSK   70 (88)
T ss_dssp             CCCEECTTTCCEESCHHHHHHHHHHHHCCCCEECTTTCCE-------ESSHHHHHHHHH-HHTH-HHH-HHHHHHHHHHH
T ss_pred             CCCCcCCCCCCccCCHHHHHHHHHHcCCCCCccCCCCCCc-------cCCHHHHHHHHH-HhCC-Ccc-hHHHHHHHHHH
Confidence            5899999999999999999999999999999999966666       999999999999 7775 677 68899999855


Q ss_pred             CCc
Q 044013          103 HLN  105 (153)
Q Consensus       103 ~~~  105 (153)
                      ...
T Consensus        71 ~~~   73 (88)
T 1llm_C           71 NYH   73 (88)
T ss_dssp             HHH
T ss_pred             Hhh
Confidence            444

>1f2i_G Fusion of N-terminal 17-MER peptide extension to ZIF12; zinc finger, dimer, protein-DNA complex, cooperativity, transcription/DNA complex; 2.35A {Mus musculus} SCOP: g.37.1.1 g.37.1.1

Probab=99.51  E-value=5.7e-15  Score=92.53  Aligned_cols=68  Identities=22%  Similarity=0.332  Sum_probs=57.5

Q ss_pred             CCCCCcccccCCCCcceecc--ccccccCChhHHHHHHHhhcCCCCCCCCCCCCCCCCCCccCCCCChhhhccccccC
Q 044013           10 SKSSSDDETDAGTGRSYECV--FCKRGFTTAQALGGHMNIHRKDRAKNRPPSSSSISDKLTFFPSPSTWDDHQRSVHT   85 (153)
Q Consensus        10 ~~~~~h~~~~~~gekp~~C~--~Cgk~F~~~~~L~~H~r~H~gekp~~C~~c~~~~Cgk~~~F~~~~~L~~H~~~~Ht   85 (153)
                      ..+..|......+++||.|+  .|++.|.....|..|+++|++++||.|+.|++.       |.....|..|++ +|+
T Consensus         4 ~~~~~~~~~~~~~~~~~~C~~~~C~k~f~~~~~l~~H~~~h~~~~~~~C~~C~~~-------f~~~~~l~~H~~-~Ht   73 (73)
T 1f2i_G            4 HPMNNLLNYVVPKMRPYACPVESCDRRFSRSDELTRHIRIHTGQKPFQCRICMRN-------FSRSDHLTTHIR-THT   73 (73)
T ss_dssp             ----CTTSCCCCCCCCEECSSTTBCCEESSHHHHHHHHHHHHCCCCEECTTTCCE-------ESCHHHHHHHHT-TCC
T ss_pred             CCccchhhccCCCCCccCCcCCCCCCccCCHHHHHHHHHhhCCCCCeECCCCCch-------hCCHHHHHHHHH-hcC
Confidence            34566777677779999997  599999999999999999999999999966666       999999999999 875

>2ctd_A Zinc finger protein 512; zinc binding, two ZF-C2H2 domain, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1

Probab=99.51  E-value=7.3e-15  Score=97.94  Aligned_cols=65  Identities=17%  Similarity=0.076  Sum_probs=55.2

Q ss_pred             ccccCCCCcceecccccccc-CChhHHHHHHHhhcCCCCCCCCCCCCCCCCCCccCCCCChhhhc-cccccCCCCCC
Q 044013           16 DETDAGTGRSYECVFCKRGF-TTAQALGGHMNIHRKDRAKNRPPSSSSISDKLTFFPSPSTWDDH-QRSVHTNNNNH   90 (153)
Q Consensus        16 ~~~~~~gekp~~C~~Cgk~F-~~~~~L~~H~r~H~gekp~~C~~c~~~~Cgk~~~F~~~~~L~~H-~~~~Ht~~kp~   90 (153)
                      ++.++ +++||.|++|++.| .....|..|+++| +++||.|..|++.       |.....|..| ++ +|+++..+
T Consensus        26 ~~~~~-~~~~~~C~~C~k~F~~~~~~L~~H~~~h-~~k~~~C~~Cgk~-------F~~~~~L~~H~~~-~H~~~p~~   92 (96)
T 2ctd_A           26 YLEIV-DKGSVSCPTCQAVGRKTIEGLKKHMENC-KQEMFTCHHCGKQ-------LRSLAGMKYHVMA-NHNSLPSG   92 (96)
T ss_dssp             HHHHH-HTSCEECTTTCSCEESSHHHHHHHHHHH-CCCCCCCSSSCCC-------CSSHHHHHHHHHH-HTCCCSSC
T ss_pred             HHHhc-CCCCcCCCCCCCCcccCHHHHHHHHHHH-CCCCeECCCCCCe-------eCCHHHHHHHhHH-hcCCCCCC
Confidence            33443 47899999999999 9999999999999 9999999955555       9999999999 88 99875433

>2rpc_A Zinc finger protein ZIC 3; ZF-C2H2, zinc finger protein of the cerebellum 3, disease mutation, DNA-binding, metal-binding, nucleus, polymorphism; NMR {Homo sapiens}

Probab=99.51  E-value=2.4e-15  Score=106.97  Aligned_cols=85  Identities=15%  Similarity=0.246  Sum_probs=67.5

Q ss_pred             CCCcccccCCCCcc--------eeccccccccCChhHHHHHHHhhcCCCCCCCCC--CCCCCCCCCccCCCCChhhhccc
Q 044013           12 SSSDDETDAGTGRS--------YECVFCKRGFTTAQALGGHMNIHRKDRAKNRPP--SSSSISDKLTFFPSPSTWDDHQR   81 (153)
Q Consensus        12 ~~~h~~~~~~gekp--------~~C~~Cgk~F~~~~~L~~H~r~H~gekp~~C~~--c~~~~Cgk~~~F~~~~~L~~H~~   81 (153)
                      |..|++....++++        |.|.+|++.|.....|..|+++|++++||.|+.  |++.       |.....|..|++
T Consensus        41 L~~H~~~~H~~~~~~~~~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~~~C~~~-------f~~~~~L~~H~~  113 (155)
T 2rpc_A           41 LVTHVTMEHVGGPEQNNHVCYWEECPREGKSFKAKYKLVNHIRVHTGEKPFPCPFPGCGKI-------FARSENLKIHKR  113 (155)
T ss_dssp             HHHHHHTTTSCCTTCSSCCCCBTTCTTSSCCCSSHHHHHHHTHHHHCCCSEECSCTTTCCE-------ESCHHHHHHHHT
T ss_pred             HHHHHHhhcCCCcccCCccccccCCCCcccccCCHHHHHHHHHhcCCCCcccCCcCCCCCc-------cCCHHHHHHHHH
Confidence            44565553333433        789999999999999999999999999999985  5555       999999999999


Q ss_pred             cccCCCCCCCCCCC--CccccccCCc
Q 044013           82 SVHTNNNNHSNYDS--YGQNYHQHLN  105 (153)
Q Consensus        82 ~~Ht~~kp~~~~~~--~~~~f~~~~~  105 (153)
                       +|++++|| .|.+  |++.|.+...
T Consensus       114 -~h~~~~~~-~C~~~~C~k~f~~~~~  137 (155)
T 2rpc_A          114 -THTGEKPF-KCEFEGCDRRFANSSD  137 (155)
T ss_dssp             -TTCSSCSB-CCSSTTCCCCBSSHHH
T ss_pred             -hhCCCCCc-cCCCCCCCCccCCHHH
Confidence             99999999 7887  9999954433

>2dlq_A GLI-kruppel family member HKR3; ZF-C2H2 domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Mus musculus} SCOP: g.37.1.1 g.37.1.1 g.37.1.1 g.37.1.1

Probab=99.51  E-value=1e-14  Score=99.55  Aligned_cols=81  Identities=11%  Similarity=0.250  Sum_probs=69.3

Q ss_pred             CCCcceeccccccccCChhHHHHHHHhhcCCCCCCCCCCCCCCCCCCccCCCCChhhhcccc--ccCCCCCCCCCCCCcc
Q 044013           21 GTGRSYECVFCKRGFTTAQALGGHMNIHRKDRAKNRPPSSSSISDKLTFFPSPSTWDDHQRS--VHTNNNNHSNYDSYGQ   98 (153)
Q Consensus        21 ~gekp~~C~~Cgk~F~~~~~L~~H~r~H~gekp~~C~~c~~~~Cgk~~~F~~~~~L~~H~~~--~Ht~~kp~~~~~~~~~   98 (153)
                      .++++|.|.+|++.|.....|..|+++|.+++||.|+.|++.       |.....|..|++.  .|.+++|| .|..|++
T Consensus         3 ~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~C~~~-------f~~~~~l~~H~~~~~~~~~~~~~-~C~~C~~   74 (124)
T 2dlq_A            3 SGSSGVECPTCHKKFLSKYYLKVHNRKHTGEKPFECPKCGKC-------YFRKENLLEHEARNCMNRSEQVF-TCSVCQE   74 (124)
T ss_dssp             CCCSSCCCTTTCCCCSSHHHHHHHHHHHSSCCSCBCTTTCCB-------CSSHHHHHHHHHHCCCCSCCCCE-ECSSSCC
T ss_pred             CCCCCCCCCCCCCcCCCHHHHHHHHHhCCCCCCeECCCCCch-------hcCHHHHHHHHhhhhcCCCCCCe-ECCCCCC
Confidence            458899999999999999999999999999999999966666       9999999999972  26788999 7999999


Q ss_pred             ccccCCcccchh
Q 044013           99 NYHQHLNMIGDE  110 (153)
Q Consensus        99 ~f~~~~~~~~~~  110 (153)
                      .|..... +..+
T Consensus        75 ~f~~~~~-l~~H   85 (124)
T 2dlq_A           75 TFRRRME-LRLH   85 (124)
T ss_dssp             EESSHHH-HHHH
T ss_pred             ccCCHHH-HHHH
Confidence            9965444 4443

>1a1h_A QGSR zinc finger peptide; complex (zinc finger/DNA), DNA-binding protein, transcription/DNA complex; HET: DNA; 1.60A {Mus musculus} SCOP: g.37.1.1 g.37.1.1 g.37.1.1 PDB: 1jk2_A 1jk1_A 1a1g_A* 1a1f_A* 1a1i_A* 1a1j_A* 1a1k_A* 1aay_A* 1a1l_A* 1p47_A 1zaa_C* 1g2f_C 1g2d_C

Probab=99.51  E-value=1e-15  Score=99.19  Aligned_cols=69  Identities=16%  Similarity=0.417  Sum_probs=59.4

Q ss_pred             CCCcccccCCCCcceeccccccccCChhHHHHHHHhhcCCCCCCCCCCCCCCCCCCccCCCCChhhhccccccCCCCC
Q 044013           12 SSSDDETDAGTGRSYECVFCKRGFTTAQALGGHMNIHRKDRAKNRPPSSSSISDKLTFFPSPSTWDDHQRSVHTNNNN   89 (153)
Q Consensus        12 ~~~h~~~~~~gekp~~C~~Cgk~F~~~~~L~~H~r~H~gekp~~C~~c~~~~Cgk~~~F~~~~~L~~H~~~~Ht~~kp   89 (153)
                      |..|++.+.. ++||.|.+|++.|.....|..|+++|++++||.|+.|++.       |.....|..|++ +|+++++
T Consensus        22 l~~H~~~h~~-~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~C~~~-------f~~~~~l~~H~~-~H~~~k~   90 (90)
T 1a1h_A           22 LTRHIRIHTG-QKPFQCRICMRNFSRSDHLTTHIRTHTGEKPFACDICGRK-------FARSDERKRHTK-IHLRQKD   90 (90)
T ss_dssp             HHHHHHHHHC-CCCEECTTTCCEESCHHHHHHHHHHHHCCCCEECTTTCCE-------ESSHHHHHHHHG-GGGC---
T ss_pred             HHHHHHHhCC-CCCccCCCCCcccCCHHHHHHHHHHcCCCCCccCCCCCch-------hCCHHHHHHHHH-HhcccCC
Confidence            5566666665 7899999999999999999999999999999999966666       999999999999 9998763

>2wbs_A Krueppel-like factor 4; transcription-DNA complex, DNA-binding, transcription, metal-binding, DNA, protein, nucleus, activator; 1.70A {Mus musculus} PDB: 2wbu_A

Probab=99.51  E-value=1.6e-15  Score=98.04  Aligned_cols=74  Identities=15%  Similarity=0.337  Sum_probs=66.4

Q ss_pred             Ccceeccc--cccccCChhHHHHHHHhhcCCCCCCCC--CCCCCCCCCCccCCCCChhhhccccccCCCCCCCCCCCCcc
Q 044013           23 GRSYECVF--CKRGFTTAQALGGHMNIHRKDRAKNRP--PSSSSISDKLTFFPSPSTWDDHQRSVHTNNNNHSNYDSYGQ   98 (153)
Q Consensus        23 ekp~~C~~--Cgk~F~~~~~L~~H~r~H~gekp~~C~--~c~~~~Cgk~~~F~~~~~L~~H~~~~Ht~~kp~~~~~~~~~   98 (153)
                      .++|.|.+  |++.|.....|..|+++|++++||.|+  .|++.       |.....|..|++ +|++++|| .|..|++
T Consensus         3 ~~~~~C~~~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~~~C~~~-------f~~~~~l~~H~~-~h~~~~~~-~C~~C~~   73 (89)
T 2wbs_A            3 TATHTCDYAGCGKTYTKSSHLKAHLRTHTGEKPYHCDWDGCGWK-------FARSDELTRHYR-KHTGHRPF-QCQKCDR   73 (89)
T ss_dssp             CCCEECCSTTTCCEESSHHHHHHHHTTSCSSCCEECCSTTTCCE-------ESSHHHHHHHHH-HHHCCCCE-ECSSSSC
T ss_pred             CCCeeCCCCCCCCcCCCHHHHHHHHHhcCCCCCcCCCCCCCCCc-------cCCHHHHHHHHH-HcCCCCCc-cCCCCCc
Confidence            46899999  999999999999999999999999997  36666       999999999999 99999999 7999999


Q ss_pred             ccccCCc
Q 044013           99 NYHQHLN  105 (153)
Q Consensus        99 ~f~~~~~  105 (153)
                      .|.....
T Consensus        74 ~f~~~~~   80 (89)
T 2wbs_A           74 AFSRSDH   80 (89)
T ss_dssp             EESSHHH
T ss_pred             ccCCHHH
Confidence            9955443

>2jp9_A Wilms tumor 1; DNA binding, nucleic acid recognition, X-RAY; HET: DNA; NMR {Homo sapiens} PDB: 2jpa_A* 2prt_A*

Probab=99.50  E-value=3.4e-15  Score=101.33  Aligned_cols=80  Identities=15%  Similarity=0.338  Sum_probs=70.6

Q ss_pred             CCCcceeccc--cccccCChhHHHHHHHhhcCCCCCCCC--CCCCCCCCCCccCCCCChhhhccccccCCCCCCCCCCCC
Q 044013           21 GTGRSYECVF--CKRGFTTAQALGGHMNIHRKDRAKNRP--PSSSSISDKLTFFPSPSTWDDHQRSVHTNNNNHSNYDSY   96 (153)
Q Consensus        21 ~gekp~~C~~--Cgk~F~~~~~L~~H~r~H~gekp~~C~--~c~~~~Cgk~~~F~~~~~L~~H~~~~Ht~~kp~~~~~~~   96 (153)
                      .+++||.|.+  |++.|.....|..|+++|.+++||.|+  .|++.       |.....|..|++ +|++++|| .|..|
T Consensus         2 ~~~~~~~C~~~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~~~C~~~-------f~~~~~l~~H~~-~h~~~~~~-~C~~C   72 (119)
T 2jp9_A            2 SEKRPFMCAYPGCNKRYFKLSHLQMHSRKHTGEKPYQCDFKDCERR-------FSRSDQLKRHQR-RHTGVKPF-QCKTC   72 (119)
T ss_dssp             CSSCCBCCCSTTSCCCBSCHHHHHHHHHHHHTTCCEECCSTTCCCE-------ESSHHHHHHHHH-HHHCCCCE-ECTTT
T ss_pred             CCCeeeeCCCCCCcchhCCHHHHHHHHHhhCCCCCccCCCCCCcCc-------cCCHHHHHHHHH-HcCCCCCc-cCCcc
Confidence            3588999997  999999999999999999999999998  57666       999999999999 99999999 79999


Q ss_pred             ccccccCCcccchh
Q 044013           97 GQNYHQHLNMIGDE  110 (153)
Q Consensus        97 ~~~f~~~~~~~~~~  110 (153)
                      ++.|..... +..+
T Consensus        73 ~~~f~~~~~-l~~H   85 (119)
T 2jp9_A           73 QRKFSRSDH-LKTH   85 (119)
T ss_dssp             CCEESCHHH-HHHH
T ss_pred             CchhCCHHH-HHHH
Confidence            999965444 4443

>2adr_A ADR1; transcription regulation, zinc finger,; NMR {Saccharomyces cerevisiae} SCOP: g.37.1.1 g.37.1.1

Probab=99.50  E-value=5e-15  Score=89.38  Aligned_cols=57  Identities=23%  Similarity=0.461  Sum_probs=51.5

Q ss_pred             cceeccccccccCChhHHHHHHHhhcCCCCCCCCCCCCCCCCCCccCCCCChhhhccccccCCC
Q 044013           24 RSYECVFCKRGFTTAQALGGHMNIHRKDRAKNRPPSSSSISDKLTFFPSPSTWDDHQRSVHTNN   87 (153)
Q Consensus        24 kp~~C~~Cgk~F~~~~~L~~H~r~H~gekp~~C~~c~~~~Cgk~~~F~~~~~L~~H~~~~Ht~~   87 (153)
                      +||.|.+|++.|.....|..|+++|++++||.|+.|++.       |.....|..|++.+|+++
T Consensus         1 k~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~C~~~-------f~~~~~l~~H~~~~H~~~   57 (60)
T 2adr_A            1 RSFVCEVCTRAFARQEHLKRHYRSHTNEKPYPCGLCNRA-------FTRRDLLIRHAQKIHSGN   57 (60)
T ss_dssp             CCBCCTTTCCCBSCHHHHHHHHHTTTSSCSEECTTTCCE-------ESSHHHHHHHHTTTSCCS
T ss_pred             CcCcCCCCccccCCHHHHHHHHHHhCCCCCccCCCCCCc-------cCCHHHHHHHHHHHcCCc
Confidence            589999999999999999999999999999999966666       999999999974388875

>2i13_A AART; DNA binding, zinc finger, DNA binding protein-DNA complex; 1.96A {Mus musculus} SCOP: k.12.1.1 PDB: 1mey_C*

Probab=99.49  E-value=1.2e-15  Score=112.03  Aligned_cols=79  Identities=23%  Similarity=0.484  Sum_probs=42.8

Q ss_pred             CCCcccccCCCCcceeccccccccCChhHHHHHHHhhcCCCCCCCCCCCCCCCCCCccCCCCChhhhccccccCCCCCCC
Q 044013           12 SSSDDETDAGTGRSYECVFCKRGFTTAQALGGHMNIHRKDRAKNRPPSSSSISDKLTFFPSPSTWDDHQRSVHTNNNNHS   91 (153)
Q Consensus        12 ~~~h~~~~~~gekp~~C~~Cgk~F~~~~~L~~H~r~H~gekp~~C~~c~~~~Cgk~~~F~~~~~L~~H~~~~Ht~~kp~~   91 (153)
                      |..|++.+.+ +++|.|.+|++.|.....|..|+++|.+++||.|+.|++.       |.....|..|++ +|.+++|| 
T Consensus        37 l~~H~~~h~~-~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~C~~~-------f~~~~~l~~H~~-~h~~~~~~-  106 (190)
T 2i13_A           37 LAEHQRTHTG-EKPYKCPECGKSFSDKKDLTRHQRTHTGEKPYKCPECGKS-------FSQRANLRAHQR-THTGEKPY-  106 (190)
T ss_dssp             HHHGGGCC----CCEECTTTCCEESSHHHHHHHHHHHHCCCCEECTTTCCE-------ESCHHHHHHHHH-HHHTCCCE-
T ss_pred             HHHHHHHcCC-CCCccCCCcCchhCCHHHHHHHHHhcCCCCCccCcccCCc-------cCCHHHHHHHHH-hcCCCCCC-
Confidence            4445554443 5666666666666666666666666666666666644433       444444444444 44444444 


Q ss_pred             CCCCCcccc
Q 044013           92 NYDSYGQNY  100 (153)
Q Consensus        92 ~~~~~~~~f  100 (153)
                      .|..|++.|
T Consensus       107 ~C~~C~~~f  115 (190)
T 2i13_A          107 ACPECGKSF  115 (190)
T ss_dssp             ECTTTCCEE
T ss_pred             cCCCCCCcc
Confidence            344444444

>2dmd_A Zinc finger protein 64, isoforms 1 and 2; ZNF338, nuclear protein, DNA- binding, transcription, C2H2-type zinc finger, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1 g.37.1.1

Probab=99.49  E-value=5.7e-15  Score=96.87  Aligned_cols=70  Identities=20%  Similarity=0.337  Sum_probs=62.4

Q ss_pred             CCCcccccCCCCcceeccccccccCChhHHHHHHHhhcCCCCCCCCCCCCCCCCCCccCCCCChhhhccccccCCCCCC
Q 044013           12 SSSDDETDAGTGRSYECVFCKRGFTTAQALGGHMNIHRKDRAKNRPPSSSSISDKLTFFPSPSTWDDHQRSVHTNNNNH   90 (153)
Q Consensus        12 ~~~h~~~~~~gekp~~C~~Cgk~F~~~~~L~~H~r~H~gekp~~C~~c~~~~Cgk~~~F~~~~~L~~H~~~~Ht~~kp~   90 (153)
                      |..|++.+.. ++||.|.+|++.|.....|..|+++|++++||.|+.|++.       |.....|..|++ +|+++++.
T Consensus        24 l~~H~~~h~~-~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~C~~~-------f~~~~~l~~H~~-~h~~~~~p   93 (96)
T 2dmd_A           24 LKTHMRCHTG-VKPYKCKTCDYAAADSSSLNKHLRIHSDERPFKCQICPYA-------SRNSSQLTVHLR-SHTGDSGP   93 (96)
T ss_dssp             HHHHGGGCCC-CCSEECSSSCCEESSHHHHHHHHHHSCCCCCEECSSSSCE-------ESSHHHHHHHHT-TCCSCCCC
T ss_pred             HHHHHHhcCC-CCCEeCCCCCCccCCHHHHHHHHHHhCCCCCccCCCCCCc-------cCCHHHHHHHHH-HhcCCCCC
Confidence            5667776665 8899999999999999999999999999999999966655       999999999999 99998765

>2ctu_A Zinc finger protein 483; zinc finger domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=99.49  E-value=2.6e-15  Score=93.54  Aligned_cols=71  Identities=13%  Similarity=0.140  Sum_probs=61.5

Q ss_pred             CCCCCCcccccCCCCcceeccccccccCChhHHHHHHHhhcCCCCCCCCCCCCCCCCCCccCCCCChhhhccccccCCCC
Q 044013            9 YSKSSSDDETDAGTGRSYECVFCKRGFTTAQALGGHMNIHRKDRAKNRPPSSSSISDKLTFFPSPSTWDDHQRSVHTNNN   88 (153)
Q Consensus         9 ~~~~~~h~~~~~~gekp~~C~~Cgk~F~~~~~L~~H~r~H~gekp~~C~~c~~~~Cgk~~~F~~~~~L~~H~~~~Ht~~k   88 (153)
                      .+.|..|++.+.+ ++||.|.+|++.|.....|..       ++||.|+.|++.       |.....|..|++ +|++++
T Consensus         3 ~~~l~~H~~~h~~-~~~~~C~~C~k~f~~~~~l~~-------~~~~~C~~C~~~-------f~~~~~l~~H~~-~H~~~~   66 (73)
T 2ctu_A            3 SGSSGKRQKIHLG-DRSQKCSKCGIIFIRRSTLSR-------RKTPMCEKCRKD-------SCQEAALNKDEG-NESGKK   66 (73)
T ss_dssp             CCSCCCCCCCCCC-CSEEECSSSCCEEECCCCCCC-------SSSCCCHHHHHT-------CSCCCSSCCCSS-CCCCCC
T ss_pred             chhHHHHHHHhCC-CCCeeCCcccchhCCHHHhCc-------CCCCCCCCCChh-------hcCHHHHHHHHH-hhcCCC
Confidence            3568899988765 899999999999999988876       889999955555       999999999999 999999


Q ss_pred             CCCCCCCC
Q 044013           89 NHSNYDSY   96 (153)
Q Consensus        89 p~~~~~~~   96 (153)
                      || .|..|
T Consensus        67 ~~-~C~~C   73 (73)
T 2ctu_A           67 TS-GPSSG   73 (73)
T ss_dssp             CS-SCCCC
T ss_pred             CC-CCCCC
Confidence            99 67665

>2rpc_A Zinc finger protein ZIC 3; ZF-C2H2, zinc finger protein of the cerebellum 3, disease mutation, DNA-binding, metal-binding, nucleus, polymorphism; NMR {Homo sapiens}

Probab=99.48  E-value=7e-15  Score=104.52  Aligned_cols=71  Identities=20%  Similarity=0.378  Sum_probs=63.7

Q ss_pred             CCCcccccCCCCcceeccc--cccccCChhHHHHHHHhhcCCCCCCCCC--CCCCCCCCCccCCCCChhhhccccccCCC
Q 044013           12 SSSDDETDAGTGRSYECVF--CKRGFTTAQALGGHMNIHRKDRAKNRPP--SSSSISDKLTFFPSPSTWDDHQRSVHTNN   87 (153)
Q Consensus        12 ~~~h~~~~~~gekp~~C~~--Cgk~F~~~~~L~~H~r~H~gekp~~C~~--c~~~~Cgk~~~F~~~~~L~~H~~~~Ht~~   87 (153)
                      |..|++.+++ ++||.|.+  |++.|.....|..|+++|++++||.|..  |++.       |.....|..|++ +|+++
T Consensus        78 l~~H~~~h~~-~~~~~C~~~~C~~~f~~~~~L~~H~~~h~~~~~~~C~~~~C~k~-------f~~~~~L~~H~~-~H~~~  148 (155)
T 2rpc_A           78 LVNHIRVHTG-EKPFPCPFPGCGKIFARSENLKIHKRTHTGEKPFKCEFEGCDRR-------FANSSDRKKHMH-VHTSD  148 (155)
T ss_dssp             HHHHTHHHHC-CCSEECSCTTTCCEESCHHHHHHHHTTTCSSCSBCCSSTTCCCC-------BSSHHHHHHSST-TTTSC
T ss_pred             HHHHHHhcCC-CCcccCCcCCCCCccCCHHHHHHHHHhhCCCCCccCCCCCCCCc-------cCCHHHHHHHHH-HhcCC
Confidence            5567777665 88999998  9999999999999999999999999995  6655       999999999999 99999


Q ss_pred             CCCC
Q 044013           88 NNHS   91 (153)
Q Consensus        88 kp~~   91 (153)
                      +||.
T Consensus       149 k~~~  152 (155)
T 2rpc_A          149 KSGP  152 (155)
T ss_dssp             CCSC
T ss_pred             CCCC
Confidence            9993

>2gli_A Protein (five-finger GLI); protein/DNA complex, transcription/DNA complex; HET: DNA; 2.60A {Homo sapiens} SCOP: g.37.1.1 g.37.1.1 g.37.1.1 g.37.1.1 g.37.1.1

Probab=99.47  E-value=3.4e-14  Score=100.70  Aligned_cols=83  Identities=19%  Similarity=0.205  Sum_probs=73.4

Q ss_pred             CcceeccccccccCChhHHHHHHH---hhcCCCCCCCCCCCCCCCCCCccCCCCChhhhccccccCCCCCCCCCCC--Cc
Q 044013           23 GRSYECVFCKRGFTTAQALGGHMN---IHRKDRAKNRPPSSSSISDKLTFFPSPSTWDDHQRSVHTNNNNHSNYDS--YG   97 (153)
Q Consensus        23 ekp~~C~~Cgk~F~~~~~L~~H~r---~H~gekp~~C~~c~~~~Cgk~~~F~~~~~L~~H~~~~Ht~~kp~~~~~~--~~   97 (153)
                      |.+|.|+.|++.|.+...|..|++   +|++++||.|++|++..|++.  |.....|..|++ +|++++|| .|.+  |+
T Consensus         1 E~~~~C~~C~~~f~~~~~L~~H~~~~h~h~~~~~~~C~~c~C~~c~~~--f~~~~~l~~H~~-~h~~~~~~-~C~~~~C~   76 (155)
T 2gli_A            1 ETDCRWDGCSQEFDSQEQLVHHINSEHIHGERKEFVCHWGGCSRELRP--FKAQYMLVVHMR-RHTGEKPH-KCTFEGCR   76 (155)
T ss_dssp             CCBCCBTTCCCBCSCHHHHHHHHHHHTSSSCSSCCCCCBTTCTTTTCC--CSSHHHHHHHTH-HHHCCCCC-CCCSTTCC
T ss_pred             CCcCCcCCCccccCCHHHHHHHHHhhccCCCCcceeCCCCCccchhhh--hhhHHHHHHHHH-hcCCCCCc-cCCCCCCC
Confidence            468999999999999999999998   799999999999988889999  999999999999 99999999 6775  99


Q ss_pred             cccccCCcccchh
Q 044013           98 QNYHQHLNMIGDE  110 (153)
Q Consensus        98 ~~f~~~~~~~~~~  110 (153)
                      +.|..... +..+
T Consensus        77 ~~f~~~~~-l~~H   88 (155)
T 2gli_A           77 KSYSRLEN-LKTH   88 (155)
T ss_dssp             CCCSSHHH-HHHH
T ss_pred             CcccCHHH-HHHH
Confidence            99965444 4443

>2drp_A Protein (tramtrack DNA-binding domain); protein-DNA complex, double helix, transcription/DNA complex; HET: DNA; 2.80A {Drosophila melanogaster} SCOP: g.37.1.1 g.37.1.1

Probab=99.46  E-value=1.1e-14  Score=89.49  Aligned_cols=57  Identities=19%  Similarity=0.363  Sum_probs=51.3

Q ss_pred             CCcceeccccccccCChhHHHHHHHh-h-cCCCCCCCCCCCCCCCCCCccCCCCChhhhccccccCC
Q 044013           22 TGRSYECVFCKRGFTTAQALGGHMNI-H-RKDRAKNRPPSSSSISDKLTFFPSPSTWDDHQRSVHTN   86 (153)
Q Consensus        22 gekp~~C~~Cgk~F~~~~~L~~H~r~-H-~gekp~~C~~c~~~~Cgk~~~F~~~~~L~~H~~~~Ht~   86 (153)
                      +++||.|.+|++.|.....|..|+++ | ++++||.|+.|++.       |.....|..|++ +|.+
T Consensus         7 ~~k~~~C~~C~k~f~~~~~l~~H~~~~H~~~~~~~~C~~C~k~-------f~~~~~L~~H~~-~~H~   65 (66)
T 2drp_A            7 GEHTYRCKVCSRVYTHISNFCRHYVTSHKRNVKVYPCPFCFKE-------FTRKDNMTAHVK-IIHK   65 (66)
T ss_dssp             ETTEEECTTTCCEESSHHHHHHHHHHHSSSSCCCEECTTTCCE-------ESCHHHHHHHHH-HHTC
T ss_pred             CCcceECCCCcchhCCHHHHHHHHHHHcCCCCcCeECCCCCCc-------cCCHHHHHHHHH-HHcC
Confidence            48999999999999999999999998 7 69999999966666       999999999998 6654

>2kmk_A Zinc finger protein GFI-1; tandem repeat zinc finger domain, protein-DNA complex, DNA-B metal-binding, nucleus; HET: DNA; NMR {Rattus norvegicus}

Probab=99.44  E-value=4.4e-15  Score=94.47  Aligned_cols=66  Identities=23%  Similarity=0.412  Sum_probs=58.0

Q ss_pred             CCCcccccCCCCcceeccccccccCChhHHHHHHHhhcCCCCCCCCCCCCCCCCCCccCCCCChhhhccccccCC
Q 044013           12 SSSDDETDAGTGRSYECVFCKRGFTTAQALGGHMNIHRKDRAKNRPPSSSSISDKLTFFPSPSTWDDHQRSVHTN   86 (153)
Q Consensus        12 ~~~h~~~~~~gekp~~C~~Cgk~F~~~~~L~~H~r~H~gekp~~C~~c~~~~Cgk~~~F~~~~~L~~H~~~~Ht~   86 (153)
                      |..|++.+.+ ++||.|.+|++.|.....|..|+++|++++||.|+.|++.       |.....|..|++ +|+|
T Consensus        17 l~~H~~~h~~-~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~C~~~-------f~~~~~l~~H~~-~H~g   82 (82)
T 2kmk_A           17 LSTHLLIHSD-TRPYPCQYCGKRFHQKSDMKKHTFIHTGEKPHKCQVCGKA-------FSQSSNLITHSR-KHTG   82 (82)
T ss_dssp             HHHHHHHHHT-CCCEECSSSCCEESSHHHHHHHHHHHHTCCCEECTTTSCE-------ESSHHHHHHHHH-HHC-
T ss_pred             HHHHHHHcCC-CCCeeCCcCChhhCCHHHHHHHHHHhcCCCCCcCCCcchh-------hCChHHHHHHHH-hhCC
Confidence            5566766654 7899999999999999999999999999999999966666       999999999999 8875

>1tf6_A Protein (transcription factor IIIA); complex (transcription regulation/DNA), RNA polymerase III, transcription initiation, zinc finger protein; HET: DNA; 3.10A {Xenopus laevis} SCOP: g.37.1.1 g.37.1.1 g.37.1.1 g.37.1.1 g.37.1.1 g.37.1.1 PDB: 1tf3_A

Probab=99.44  E-value=4.7e-14  Score=103.47  Aligned_cols=88  Identities=17%  Similarity=0.219  Sum_probs=64.3

Q ss_pred             CCCcccccCCCCcceecc--ccccccCChhHHHHHH-Hhh-cCCCCCCC--CCCCCCCCCCCccCCCCChhhhccccccC
Q 044013           12 SSSDDETDAGTGRSYECV--FCKRGFTTAQALGGHM-NIH-RKDRAKNR--PPSSSSISDKLTFFPSPSTWDDHQRSVHT   85 (153)
Q Consensus        12 ~~~h~~~~~~gekp~~C~--~Cgk~F~~~~~L~~H~-r~H-~gekp~~C--~~c~~~~Cgk~~~F~~~~~L~~H~~~~Ht   85 (153)
                      |..|++.+.+ ++||.|.  +|++.|.+...|..|+ +.| .+++||.|  +.|++.       |.....|..|++ +|+
T Consensus        60 l~~H~~~h~~-~~~~~C~~~~C~~~f~~~~~l~~H~~~~h~~~~~~~~C~~~~C~k~-------f~~~~~L~~H~~-~H~  130 (190)
T 1tf6_A           60 LTRHSLTHTG-EKNFTCDSDGCDLRFTTKANMKKHFNRFHNIKICVYVCHFENCGKA-------FKKHNQLKVHQF-SHT  130 (190)
T ss_dssp             HHHHHTTTTT-CCCEECCSSSCCCEESCHHHHHHHHHTTSSTTTSCCEECSSSSCEE-------CSSHHHHHHHHG-GGS
T ss_pred             HHHHHHHccC-CCceeCCCCCCCCccCCHHHHHHHHHHhcCCCcceeeCCCCCCccc-------cCCHHHHHHHHH-HhC
Confidence            4556666554 7788888  7888888888888888 667 46778888  644444       888888888888 888


Q ss_pred             CCCCCCCCCC--CccccccCCcccchh
Q 044013           86 NNNNHSNYDS--YGQNYHQHLNMIGDE  110 (153)
Q Consensus        86 ~~kp~~~~~~--~~~~f~~~~~~~~~~  110 (153)
                      +++|| .|..  |+++|..... +..+
T Consensus       131 ~~~~~-~C~~~~C~k~F~~~~~-L~~H  155 (190)
T 1tf6_A          131 QQLPY-ECPHEGCDKRFSLPSR-LKRH  155 (190)
T ss_dssp             SSCSS-BCCSSSCCCBCSSHHH-HHHH
T ss_pred             CCCCc-cCCCCCCCchhcCHHH-HHHH
Confidence            88888 6766  8888855444 4444

>1ubd_C Protein (YY1 zinc finger domain); transcription initiation, initiator element, zinc finger protein, DNA- protein recognition; HET: DNA; 2.50A {Homo sapiens} SCOP: g.37.1.1 g.37.1.1 g.37.1.1 g.37.1.1 PDB: 1znm_A*

Probab=99.43  E-value=4.8e-14  Score=96.48  Aligned_cols=70  Identities=23%  Similarity=0.474  Sum_probs=57.8

Q ss_pred             CCCcccccCCCCcceeccc--cccccCChhHHHHHHHhhcCCCCCCCCC--CCCCCCCCCccCCCCChhhhccccccCCC
Q 044013           12 SSSDDETDAGTGRSYECVF--CKRGFTTAQALGGHMNIHRKDRAKNRPP--SSSSISDKLTFFPSPSTWDDHQRSVHTNN   87 (153)
Q Consensus        12 ~~~h~~~~~~gekp~~C~~--Cgk~F~~~~~L~~H~r~H~gekp~~C~~--c~~~~Cgk~~~F~~~~~L~~H~~~~Ht~~   87 (153)
                      |..|++.+++ ++||.|.+  |++.|.....|..|+++|++++||.|+.  |++.       |.....|..|++ +|+++
T Consensus        50 l~~H~~~h~~-~~~~~C~~~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~~~C~~~-------f~~~~~L~~H~~-~H~~~  120 (124)
T 1ubd_C           50 LKRHQLVHTG-EKPFQCTFEGCGKRFSLDFNLRTHVRIHTGDRPYVCPFDGCNKK-------FAQSTNLKSHIL-THAKA  120 (124)
T ss_dssp             HHHHGGGTSC-CCCEECCSTTCCCEESCHHHHHHHHHHHHCCCCCCCCSTTCCCC-------CSSTTTTHHHHH-HHC--
T ss_pred             HHHHHHHcCC-CCCeeCCCCCCcCccCCHHHHHHHHHHhCCCCceECCCCCCCCc-------cCCHHHHHHHHH-HHccc
Confidence            5667777665 88999986  9999999999999999999999999963  6555       999999999999 99999


Q ss_pred             CCC
Q 044013           88 NNH   90 (153)
Q Consensus        88 kp~   90 (153)
                      +|+
T Consensus       121 k~~  123 (124)
T 1ubd_C          121 KNN  123 (124)
T ss_dssp             ---
T ss_pred             ccC
Confidence            876

>2emk_A Zinc finger protein 28 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 PDB: 2ysv_A

Probab=99.43  E-value=1.5e-13  Score=78.65  Aligned_cols=46  Identities=22%  Similarity=0.521  Sum_probs=41.2

Q ss_pred             CCcccccCCCCcceeccccccccCChhHHHHHHHhhcCCCCCCCCCC
Q 044013           13 SSDDETDAGTGRSYECVFCKRGFTTAQALGGHMNIHRKDRAKNRPPS   59 (153)
Q Consensus        13 ~~h~~~~~~gekp~~C~~Cgk~F~~~~~L~~H~r~H~gekp~~C~~c   59 (153)
                      ++|++.+++ ++||.|.+|++.|.....|..|+++|++++||.|+.|
T Consensus         1 ~~H~~~H~~-~k~~~C~~C~k~F~~~~~L~~H~~~H~~~k~~~C~~C   46 (46)
T 2emk_A            1 GSSGSSGTG-EKPYECKECGKAFSQTTHLIQHQRVHTGEKPSGPSSG   46 (46)
T ss_dssp             CCCCCCCSS-SCSCBCSSSCCBCSCHHHHHHHHHHHSSCCCSSCCCC
T ss_pred             CCCCCccCC-CCceECCCCCchhCCHHHHHHHHHHcCCCCCCCCCCC
Confidence            357777765 8999999999999999999999999999999999865

>2eml_A Zinc finger protein 28 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.43  E-value=1.6e-13  Score=78.45  Aligned_cols=46  Identities=26%  Similarity=0.587  Sum_probs=41.4

Q ss_pred             CCcccccCCCCcceeccccccccCChhHHHHHHHhhcCCCCCCCCCC
Q 044013           13 SSDDETDAGTGRSYECVFCKRGFTTAQALGGHMNIHRKDRAKNRPPS   59 (153)
Q Consensus        13 ~~h~~~~~~gekp~~C~~Cgk~F~~~~~L~~H~r~H~gekp~~C~~c   59 (153)
                      ++|++.+++ ++||.|.+|++.|.....|..|+++|++++||.|+.|
T Consensus         1 ~~H~~~H~~-~k~~~C~~C~k~f~~~~~L~~H~~~H~~~~~~~C~~C   46 (46)
T 2eml_A            1 GSSGSSGTG-EKPYECSVCGKAFSHRQSLSVHQRIHSGKKPSGPSSG   46 (46)
T ss_dssp             CCCCCCCSS-CCSEECSSSCCEESSHHHHHHHHGGGSSCCCSCSSCC
T ss_pred             CCccCCcCC-CCCeeCCCcCCccCCHHHHHHHHHHhcCCCCCCCCCC
Confidence            357777765 8999999999999999999999999999999999865

>2eod_A TNF receptor-associated factor 4; zinc binding, NF-KB, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=99.43  E-value=4.3e-14  Score=87.25  Aligned_cols=58  Identities=14%  Similarity=0.230  Sum_probs=54.2

Q ss_pred             CCcceeccccccccCChhHHHHHHHhhcCCCCCCCC-CCCCCCCCCCccCCCCChhhhccccccCCCCC
Q 044013           22 TGRSYECVFCKRGFTTAQALGGHMNIHRKDRAKNRP-PSSSSISDKLTFFPSPSTWDDHQRSVHTNNNN   89 (153)
Q Consensus        22 gekp~~C~~Cgk~F~~~~~L~~H~r~H~gekp~~C~-~c~~~~Cgk~~~F~~~~~L~~H~~~~Ht~~kp   89 (153)
                      +++||.|.+|++.|. ...|..|+++ ++++||.|+ .|++.       |...+.|..|++ +|...+|
T Consensus         7 ~~~~~~C~~C~k~f~-~~~L~~H~~~-~~~~p~~C~~~C~k~-------f~~~~~L~~H~~-~hc~~~~   65 (66)
T 2eod_A            7 GKRTQPCTYCTKEFV-FDTIQSHQYQ-CPRLPVACPNQCGVG-------TVAREDLPGHLK-DSCNTAL   65 (66)
T ss_dssp             CCCEEECSSSCCEEE-HHHHHHHHHH-CSSSEEECTTCCSCC-------EEETTTHHHHHH-TTSSSCC
T ss_pred             CCCCeeccccCCccC-HHHHHHHHHH-cCCcCccCCcccCcc-------cccHHHHHHHHH-hhcccCc
Confidence            588999999999999 9999999999 999999999 88888       999999999999 9887765

>2emf_A Zinc finger protein 484; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.42  E-value=1.5e-13  Score=78.71  Aligned_cols=45  Identities=27%  Similarity=0.611  Sum_probs=40.8

Q ss_pred             CcccccCCCCcceeccccccccCChhHHHHHHHhhcCCCCCCCCCC
Q 044013           14 SDDETDAGTGRSYECVFCKRGFTTAQALGGHMNIHRKDRAKNRPPS   59 (153)
Q Consensus        14 ~h~~~~~~gekp~~C~~Cgk~F~~~~~L~~H~r~H~gekp~~C~~c   59 (153)
                      +|++.+++ ++||.|.+|++.|.....|..|+++|++++||.|+.|
T Consensus         2 ~H~~~H~~-~k~~~C~~C~k~F~~~~~L~~H~~~H~~~k~~~C~~c   46 (46)
T 2emf_A            2 SSGSSGTG-GKHFECTECGKAFTRKSTLSMHQKIHTGEKPSGPSSG   46 (46)
T ss_dssp             CCCSSSSS-SCCEECSSSCCEESCHHHHHHHGGGTSCSSCSCCCCC
T ss_pred             ccccccCC-CCCeECCCCCchhCCHHHHHHHHHHhCCCCCCCCCCC
Confidence            57777765 8999999999999999999999999999999999865

>2ytn_A Zinc finger protein 347; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.42  E-value=1.6e-13  Score=78.44  Aligned_cols=45  Identities=24%  Similarity=0.519  Sum_probs=40.0

Q ss_pred             CcccccCCCCcceeccccccccCChhHHHHHHHhhcCCCCCCCCCC
Q 044013           14 SDDETDAGTGRSYECVFCKRGFTTAQALGGHMNIHRKDRAKNRPPS   59 (153)
Q Consensus        14 ~h~~~~~~gekp~~C~~Cgk~F~~~~~L~~H~r~H~gekp~~C~~c   59 (153)
                      .|++.+++ ++||.|.+|++.|.....|..|+++|++++||.|++|
T Consensus         2 ~H~~~H~~-~k~~~C~~C~k~F~~~~~L~~H~~~H~~~k~~~C~~C   46 (46)
T 2ytn_A            2 SSGSSGTG-KKPYKCNECGKVFTQNSHLARHRGIHTGEKPSGPSSG   46 (46)
T ss_dssp             CCCCCCSC-CSSCBCTTTCCBCSSHHHHHHHGGGTSCCCCCSCCCC
T ss_pred             CCCcCCCC-CcCeECCCCCCeeCCHHHHHHHhhhcCCCCCCCCCCC
Confidence            56777665 8899999999999999999999999999999999865

>2emp_A Zinc finger protein 347; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.42  E-value=1.6e-13  Score=78.47  Aligned_cols=46  Identities=22%  Similarity=0.466  Sum_probs=41.5

Q ss_pred             CCcccccCCCCcceeccccccccCChhHHHHHHHhhcCCCCCCCCCC
Q 044013           13 SSDDETDAGTGRSYECVFCKRGFTTAQALGGHMNIHRKDRAKNRPPS   59 (153)
Q Consensus        13 ~~h~~~~~~gekp~~C~~Cgk~F~~~~~L~~H~r~H~gekp~~C~~c   59 (153)
                      +.|++.+++ ++||.|.+|++.|.....|..|+++|++++||.|+.|
T Consensus         1 ~~H~~~H~~-~k~~~C~~C~k~f~~~~~L~~H~~~H~~~k~~~C~~C   46 (46)
T 2emp_A            1 GSSGSSGTG-VKPYMCNECGKAFSVYSSLTTHQVIHTGEKPSGPSSG   46 (46)
T ss_dssp             CCCCSCSSC-CCSEECSSSCCEESCHHHHHHHHHHHHCCSCCSCCCC
T ss_pred             CCcccccCC-CcCeECCCCCchhCCHHHHHHHHHHcCCCCCCCCCCC
Confidence            357777765 8999999999999999999999999999999999965

>2ely_A Zinc finger protein 224; DNA-binding, metal-binding, nuclear protein, phosphorylation, polymorphism, repeat, repressor, transcription; NMR {Homo sapiens} SCOP: k.12.1.1 PDB: 2ena_A 2en4_A

Probab=99.42  E-value=1.7e-13  Score=78.49  Aligned_cols=45  Identities=24%  Similarity=0.608  Sum_probs=40.2

Q ss_pred             CcccccCCCCcceeccccccccCChhHHHHHHHhhcCCCCCCCCCC
Q 044013           14 SDDETDAGTGRSYECVFCKRGFTTAQALGGHMNIHRKDRAKNRPPS   59 (153)
Q Consensus        14 ~h~~~~~~gekp~~C~~Cgk~F~~~~~L~~H~r~H~gekp~~C~~c   59 (153)
                      +|++.+++ ++||.|.+|++.|.....|..|+++|++++||.|+.|
T Consensus         2 ~H~~~H~~-~k~~~C~~C~k~f~~~~~L~~H~~~H~~~k~~~C~~C   46 (46)
T 2ely_A            2 SSGSSGTG-EKPFKCVECGKGFSRRSALNVHHKLHTGEKPSGPSSG   46 (46)
T ss_dssp             CCCCCCCC-CCSBCCSSSCCCBSSTTHHHHHHHHHSCCSSCSCCCC
T ss_pred             CCCCCCCC-CCCcccCccCcccCCHHHHHHHHHHcCCCCCCCCCCC
Confidence            57777765 8899999999999999999999999999999999865

>2eq4_A Zinc finger protein 224; C2H2, zinc finger domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.42  E-value=1.8e-13  Score=78.19  Aligned_cols=45  Identities=22%  Similarity=0.501  Sum_probs=40.5

Q ss_pred             CcccccCCCCcceeccccccccCChhHHHHHHHhhcCCCCCCCCCC
Q 044013           14 SDDETDAGTGRSYECVFCKRGFTTAQALGGHMNIHRKDRAKNRPPS   59 (153)
Q Consensus        14 ~h~~~~~~gekp~~C~~Cgk~F~~~~~L~~H~r~H~gekp~~C~~c   59 (153)
                      .|++.+++ ++||.|.+|++.|.....|..|+++|++++||.|+.|
T Consensus         2 ~H~~~H~~-~k~~~C~~C~k~f~~~~~L~~H~~~H~~~~~~~C~~C   46 (46)
T 2eq4_A            2 SSGSSGTG-EKLYNCKECGKSFSRAPCLLKHERLHSGEKPSGPSSG   46 (46)
T ss_dssp             CCCCCSSC-CCCCCBTTTTBCCSCHHHHHHHHHHCCSSSCCCCCCC
T ss_pred             CCcccCCC-CCCeECCCCCCccCchHHHHHHHHhcCCCCCCCCCCC
Confidence            57777765 8899999999999999999999999999999999865

>2eoe_A Zinc finger protein 347; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.42  E-value=1.8e-13  Score=78.19  Aligned_cols=45  Identities=24%  Similarity=0.495  Sum_probs=40.8

Q ss_pred             CcccccCCCCcceeccccccccCChhHHHHHHHhhcCCCCCCCCCC
Q 044013           14 SDDETDAGTGRSYECVFCKRGFTTAQALGGHMNIHRKDRAKNRPPS   59 (153)
Q Consensus        14 ~h~~~~~~gekp~~C~~Cgk~F~~~~~L~~H~r~H~gekp~~C~~c   59 (153)
                      .|++.+++ ++||.|.+|++.|.....|..|+++|++++||.|+.|
T Consensus         2 ~H~~~H~~-~~~~~C~~C~k~F~~~~~L~~H~~~H~~~~~~~C~~C   46 (46)
T 2eoe_A            2 SSGSSGTG-EKPYKCNECGKVFTQNSHLANHQRIHTGVKPSGPSSG   46 (46)
T ss_dssp             CCSSCCCC-CCSSEETTTTEECSSHHHHHHHHGGGSCCCSCSSCCC
T ss_pred             CCCCCCCC-CCCeECCCcChhhCCHHHHHHHHHHcCCCCCCCCCCC
Confidence            57777765 8999999999999999999999999999999999965

>2emh_A Zinc finger protein 484; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.42  E-value=1.6e-13  Score=78.50  Aligned_cols=46  Identities=26%  Similarity=0.544  Sum_probs=41.5

Q ss_pred             CCcccccCCCCcceeccccccccCChhHHHHHHHhhcCCCCCCCCCC
Q 044013           13 SSDDETDAGTGRSYECVFCKRGFTTAQALGGHMNIHRKDRAKNRPPS   59 (153)
Q Consensus        13 ~~h~~~~~~gekp~~C~~Cgk~F~~~~~L~~H~r~H~gekp~~C~~c   59 (153)
                      ++|++.+++ ++||.|.+|++.|.....|..|+++|++++||.|+.|
T Consensus         1 ~~H~~~H~~-~k~~~C~~C~k~F~~~~~L~~H~~~H~~~k~~~C~~c   46 (46)
T 2emh_A            1 GSSGSSGTG-ERPYICTVCGKAFTDRSNLIKHQKIHTGEKPSGPSSG   46 (46)
T ss_dssp             CCCCCSCSC-CCSEECTTTCCEESSHHHHHHHHHHHHCSSCSSSCCC
T ss_pred             CCCCCCCCC-CCCcCCCCCCchhCCHHHHHHHHHhcCCCCCCCCCCC
Confidence            357777765 8999999999999999999999999999999999965

>2emy_A Zinc finger protein 268; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.42  E-value=1.9e-13  Score=78.18  Aligned_cols=45  Identities=22%  Similarity=0.473  Sum_probs=40.9

Q ss_pred             CcccccCCCCcceeccccccccCChhHHHHHHHhhcCCCCCCCCCC
Q 044013           14 SDDETDAGTGRSYECVFCKRGFTTAQALGGHMNIHRKDRAKNRPPS   59 (153)
Q Consensus        14 ~h~~~~~~gekp~~C~~Cgk~F~~~~~L~~H~r~H~gekp~~C~~c   59 (153)
                      .|++.+++ ++||.|.+|++.|.....|..|+++|++++||.|+.|
T Consensus         2 ~H~~~H~~-~k~~~C~~C~k~F~~~~~L~~H~~~H~~~k~~~C~~C   46 (46)
T 2emy_A            2 SSGSSGTG-ENPYECHECGKAFSRKYQLISHQRTHAGEKPSGPSSG   46 (46)
T ss_dssp             CCCCCCCS-SCCEECSSSCCEESSHHHHHHHHHHHTTSCCSCSSCC
T ss_pred             CCCCCCCC-CcCcCCCCCCcccCcHHHHHHHHHHcCCCCCCCCCCC
Confidence            57777765 8999999999999999999999999999999999865

>2elz_A Zinc finger protein 224; DNA-binding, metal-binding, nuclear protein, phosphorylation, polymorphism, repeat, repressor, transcription; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.42  E-value=2e-13  Score=78.19  Aligned_cols=45  Identities=18%  Similarity=0.448  Sum_probs=40.4

Q ss_pred             CcccccCCCCcceeccccccccCChhHHHHHHHhhcCCCCCCCCCC
Q 044013           14 SDDETDAGTGRSYECVFCKRGFTTAQALGGHMNIHRKDRAKNRPPS   59 (153)
Q Consensus        14 ~h~~~~~~gekp~~C~~Cgk~F~~~~~L~~H~r~H~gekp~~C~~c   59 (153)
                      +|++.+++ ++||.|.+|++.|.....|..|+++|++++||.|+.|
T Consensus         2 ~h~~~h~~-~k~~~C~~C~k~F~~~~~L~~H~~~H~~~~~~~C~~C   46 (46)
T 2elz_A            2 SSGSSGSV-EKPYKCEDCGKGYNRRLNLDMHQRVHMGEKTSGPSSG   46 (46)
T ss_dssp             CCCSCCCC-CSSCBCSSSCCBCSSHHHHHHHGGGGGSCCCCCSCCC
T ss_pred             CCCCCCCC-CCCeeCcccCchhCCHHHHHHHHHhcCCCCCCCCCCC
Confidence            57777765 8899999999999999999999999999999999865

>2el4_A Zinc finger protein 268; alternative splicing, DNA-binding, metal-binding, nuclear protein, repeat, transcription, transcription regulation; NMR {Homo sapiens} SCOP: k.12.1.1 PDB: 2eog_A 2em1_A 2emw_A 2eok_A

Probab=99.42  E-value=1.8e-13  Score=78.19  Aligned_cols=45  Identities=20%  Similarity=0.381  Sum_probs=40.7

Q ss_pred             CcccccCCCCcceeccccccccCChhHHHHHHHhhcCCCCCCCCCC
Q 044013           14 SDDETDAGTGRSYECVFCKRGFTTAQALGGHMNIHRKDRAKNRPPS   59 (153)
Q Consensus        14 ~h~~~~~~gekp~~C~~Cgk~F~~~~~L~~H~r~H~gekp~~C~~c   59 (153)
                      .|++.+++ ++||.|.+|++.|.....|..|+++|++++||.|+.|
T Consensus         2 ~H~~~H~~-~k~~~C~~C~k~f~~~~~L~~H~~~H~~~k~~~C~~C   46 (46)
T 2el4_A            2 SSGSSGTG-VKPYGCSQCAKTFSLKSQLIVHQRSHTGVKPSGPSSG   46 (46)
T ss_dssp             CCCCCSCC-CCSEECSSSSCEESSHHHHHHHGGGSSSCCCSCCTTC
T ss_pred             ccccCCCC-CCceECCCCCchhCCHHHHHHHHHHhCCCCCCCCCCC
Confidence            57777765 8999999999999999999999999999999999865

>2emm_A ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.42  E-value=2e-13  Score=77.96  Aligned_cols=45  Identities=22%  Similarity=0.442  Sum_probs=41.1

Q ss_pred             CcccccCCCCcceeccccccccCChhHHHHHHHhhcCCCCCCCCCC
Q 044013           14 SDDETDAGTGRSYECVFCKRGFTTAQALGGHMNIHRKDRAKNRPPS   59 (153)
Q Consensus        14 ~h~~~~~~gekp~~C~~Cgk~F~~~~~L~~H~r~H~gekp~~C~~c   59 (153)
                      .|++.+++ ++||.|.+|++.|.....|..|+++|++++||.|+.|
T Consensus         2 ~H~~~H~~-~k~~~C~~C~k~f~~~~~L~~H~~~H~~~k~~~C~~C   46 (46)
T 2emm_A            2 SSGSSGTG-ERPHKCNECGKSFIQSAHLIQHQRIHTGEKPSGPSSG   46 (46)
T ss_dssp             CCCSCSSC-CCSEECSSSCCEESSHHHHHHHHHHHSCCCTTSSSCC
T ss_pred             CCcCCcCC-CCCeeCCCCChhhCCHHHHHHHHHHhCCCCCCCCCCC
Confidence            57777765 8999999999999999999999999999999999966

>1tf6_A Protein (transcription factor IIIA); complex (transcription regulation/DNA), RNA polymerase III, transcription initiation, zinc finger protein; HET: DNA; 3.10A {Xenopus laevis} SCOP: g.37.1.1 g.37.1.1 g.37.1.1 g.37.1.1 g.37.1.1 g.37.1.1 PDB: 1tf3_A

Probab=99.42  E-value=3.4e-14  Score=104.24  Aligned_cols=70  Identities=17%  Similarity=0.339  Sum_probs=32.8

Q ss_pred             Ccceec--cccccccCChhHHHHHHHhhcCCCCCCCC--CCCCCCCCCCccCCCCChhhhcccccc-CCCCCCCCC--CC
Q 044013           23 GRSYEC--VFCKRGFTTAQALGGHMNIHRKDRAKNRP--PSSSSISDKLTFFPSPSTWDDHQRSVH-TNNNNHSNY--DS   95 (153)
Q Consensus        23 ekp~~C--~~Cgk~F~~~~~L~~H~r~H~gekp~~C~--~c~~~~Cgk~~~F~~~~~L~~H~~~~H-t~~kp~~~~--~~   95 (153)
                      ++||.|  .+|++.|.....|..|+++|.+++||.|+  .|++.       |.....|..|++..| .+.+|| .|  ..
T Consensus        40 ~~~~~C~~~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~~~C~~~-------f~~~~~l~~H~~~~h~~~~~~~-~C~~~~  111 (190)
T 1tf6_A           40 EKPFPCKEEGCEKGFTSLHHLTRHSLTHTGEKNFTCDSDGCDLR-------FTTKANMKKHFNRFHNIKICVY-VCHFEN  111 (190)
T ss_dssp             CCSSCCSSTTCCCCCSSHHHHHHHHTTTTTCCCEECCSSSCCCE-------ESCHHHHHHHHHTTSSTTTSCC-EECSSS
T ss_pred             CCCccCCCCCCChhhCCHHHHHHHHHHccCCCceeCCCCCCCCc-------cCCHHHHHHHHHHhcCCCccee-eCCCCC
Confidence            444555  44555555555555555555555555544  33333       555555555541144 234444 34  44


Q ss_pred             Ccccc
Q 044013           96 YGQNY  100 (153)
Q Consensus        96 ~~~~f  100 (153)
                      |++.|
T Consensus       112 C~k~f  116 (190)
T 1tf6_A          112 CGKAF  116 (190)
T ss_dssp             SCEEC
T ss_pred             Ccccc
Confidence            55554

>2ema_A Zinc finger protein 347; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 PDB: 2emc_A

Probab=99.42  E-value=2e-13  Score=78.11  Aligned_cols=45  Identities=22%  Similarity=0.520  Sum_probs=40.8

Q ss_pred             CcccccCCCCcceeccccccccCChhHHHHHHHhhcCCCCCCCCCC
Q 044013           14 SDDETDAGTGRSYECVFCKRGFTTAQALGGHMNIHRKDRAKNRPPS   59 (153)
Q Consensus        14 ~h~~~~~~gekp~~C~~Cgk~F~~~~~L~~H~r~H~gekp~~C~~c   59 (153)
                      +|++.+++ ++||.|.+|++.|.....|..|+++|++++||.|+.|
T Consensus         2 ~H~~~H~~-~k~~~C~~C~k~f~~~~~L~~H~~~H~~~k~~~C~~c   46 (46)
T 2ema_A            2 SSGSSGTG-EKRYKCNECGKVFSRNSQLSQHQKIHTGEKPSGPSSG   46 (46)
T ss_dssp             CSCSSCTT-SCCEECSSSCCEESSHHHHHHHHTGGGCCCCCSSSCC
T ss_pred             CCccCCCC-CcCcCCCCCcchhCCHHHHHHHHHhcCCCCCCCCCCC
Confidence            57777765 8999999999999999999999999999999999865

>2em7_A Zinc finger protein 224; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=99.41  E-value=2e-13  Score=78.04  Aligned_cols=45  Identities=22%  Similarity=0.525  Sum_probs=40.9

Q ss_pred             CcccccCCCCcceeccccccccCChhHHHHHHHhhcCCCCCCCCCC
Q 044013           14 SDDETDAGTGRSYECVFCKRGFTTAQALGGHMNIHRKDRAKNRPPS   59 (153)
Q Consensus        14 ~h~~~~~~gekp~~C~~Cgk~F~~~~~L~~H~r~H~gekp~~C~~c   59 (153)
                      +|++.+++ ++||.|.+|++.|.....|..|+++|++++||.|+.|
T Consensus         2 ~H~~~H~~-~k~~~C~~C~k~f~~~~~L~~H~~~H~~~k~~~C~~C   46 (46)
T 2em7_A            2 SSGSSGTG-EKPYKCEECGKGFICRRDLYTHHMVHTGEKPSGPSSG   46 (46)
T ss_dssp             CCCCSSSC-CCSEECSSSCCEESCHHHHHHHGGGGTTCCCSSTTCC
T ss_pred             CCCCCCCC-CcCccCCCccchhCCHHHHHHHHHHhCCCCCCCCCCC
Confidence            57777766 8899999999999999999999999999999999865

>2em0_A Zinc finger protein 224; DNA-binding, metal-binding, nuclear protein, phosphorylation, polymorphism, repeat, repressor, transcription; NMR {Homo sapiens}

Probab=99.41  E-value=1.8e-13  Score=78.23  Aligned_cols=45  Identities=22%  Similarity=0.484  Sum_probs=39.2

Q ss_pred             CcccccCCCCcceeccccccccCChhHHHHHHHhhcCCCCCCCCCC
Q 044013           14 SDDETDAGTGRSYECVFCKRGFTTAQALGGHMNIHRKDRAKNRPPS   59 (153)
Q Consensus        14 ~h~~~~~~gekp~~C~~Cgk~F~~~~~L~~H~r~H~gekp~~C~~c   59 (153)
                      .|++.+++ ++||.|++|++.|.....|..|+++|++++||.|+.|
T Consensus         2 ~H~~~H~~-~k~~~C~~C~k~F~~~~~L~~H~~~H~~~~~~~C~~C   46 (46)
T 2em0_A            2 SSGSSGMG-EKTWKCRECDMCFSQASSLRLHQNVHVGEKPSGPSSG   46 (46)
T ss_dssp             CCCCCSCC-CCCCCCSSSCCCCSSHHHHHHHGGGGSSSSCSCSSCC
T ss_pred             CCcCccCC-CcCeECCCCCcccCCHHHHHHHHHHcCCCCCcCCCCC
Confidence            56777665 8899999999999999999999999999999999865

>2ene_A Zinc finger protein 347; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.41  E-value=2.1e-13  Score=78.00  Aligned_cols=45  Identities=22%  Similarity=0.493  Sum_probs=40.8

Q ss_pred             CcccccCCCCcceeccccccccCChhHHHHHHHhhcCCCCCCCCCC
Q 044013           14 SDDETDAGTGRSYECVFCKRGFTTAQALGGHMNIHRKDRAKNRPPS   59 (153)
Q Consensus        14 ~h~~~~~~gekp~~C~~Cgk~F~~~~~L~~H~r~H~gekp~~C~~c   59 (153)
                      +|++.+++ ++||.|.+|++.|.....|..|+++|++++||.|+.|
T Consensus         2 ~H~~~H~~-~k~~~C~~C~k~f~~~~~L~~H~~~H~~~k~~~C~~C   46 (46)
T 2ene_A            2 SSGSSGTG-EKPYKCNECGKVFRHNSYLSRHQRIHTGEKPSGPSSG   46 (46)
T ss_dssp             CCCSSCCC-SSSEECSSSCCEESSHHHHHHHHTTTCCCCCCSCCCC
T ss_pred             CcccCCCC-CCCeECCCCCchhCChHHHHHHHhhcCCCCCCCCCCC
Confidence            57777765 8999999999999999999999999999999999966

>2ytq_A Zinc finger protein 268; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.41  E-value=2.1e-13  Score=78.10  Aligned_cols=45  Identities=24%  Similarity=0.496  Sum_probs=40.0

Q ss_pred             CcccccCCCCcceeccccccccCChhHHHHHHHhhcCCCCCCCCCC
Q 044013           14 SDDETDAGTGRSYECVFCKRGFTTAQALGGHMNIHRKDRAKNRPPS   59 (153)
Q Consensus        14 ~h~~~~~~gekp~~C~~Cgk~F~~~~~L~~H~r~H~gekp~~C~~c   59 (153)
                      +|++.+++ ++||.|.+|++.|.....|..|+++|++++||.|+.|
T Consensus         2 ~H~~~H~~-~k~~~C~~C~k~f~~~~~L~~H~~~H~~~k~~~C~~C   46 (46)
T 2ytq_A            2 SSGSSGAG-EKPYGCSECGKAFSSKSYLIIHMRTHSGEKPSGPSSG   46 (46)
T ss_dssp             CCSSCSSC-CCSCBCSSSCCBCSCHHHHHHHHTTTCCSCSSCCCCC
T ss_pred             CCCcCcCC-CCCcCCCccChhhCChHHHHHHHHHhCCCCCCCCCCC
Confidence            57777765 8899999999999999999999999999999999865

>2eov_A Zinc finger protein 484; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.41  E-value=2.5e-13  Score=77.57  Aligned_cols=46  Identities=24%  Similarity=0.461  Sum_probs=41.0

Q ss_pred             CCcccccCCCCcceeccccccccCChhHHHHHHHhhcCCCCCCCCCC
Q 044013           13 SSDDETDAGTGRSYECVFCKRGFTTAQALGGHMNIHRKDRAKNRPPS   59 (153)
Q Consensus        13 ~~h~~~~~~gekp~~C~~Cgk~F~~~~~L~~H~r~H~gekp~~C~~c   59 (153)
                      ++|++.+++ ++||.|++|++.|.....|..|+++|++++||.|+.|
T Consensus         1 ~~H~~~H~~-~~~~~C~~C~k~f~~~~~L~~H~~~H~~~~~~~C~~C   46 (46)
T 2eov_A            1 GSSGSSGTG-EKPYKCSDCGKSFTWKSRLRIHQKCHTGERHSGPSSG   46 (46)
T ss_dssp             CCCCCCCSS-CCSCBCSSSCCBCSSHHHHHHHHHHHSCCSSCCSCCC
T ss_pred             CCCCCCCCC-CCCccCCccChhhCCHHHHHHHHHhcCCCCCCCCCCC
Confidence            357777665 8899999999999999999999999999999999865

>2em9_A Zinc finger protein 224; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 PDB: 2yrh_A

Probab=99.41  E-value=2.6e-13  Score=77.50  Aligned_cols=45  Identities=22%  Similarity=0.495  Sum_probs=40.8

Q ss_pred             CcccccCCCCcceeccccccccCChhHHHHHHHhhcCCCCCCCCCC
Q 044013           14 SDDETDAGTGRSYECVFCKRGFTTAQALGGHMNIHRKDRAKNRPPS   59 (153)
Q Consensus        14 ~h~~~~~~gekp~~C~~Cgk~F~~~~~L~~H~r~H~gekp~~C~~c   59 (153)
                      +|++.+++ ++||.|.+|++.|.....|..|+++|++++||.|+.|
T Consensus         2 ~H~~~H~~-~k~~~C~~C~k~f~~~~~L~~H~~~H~~~~~~~C~~C   46 (46)
T 2em9_A            2 SSGSSGTG-EKPYNCKECGKSFRWASCLLKHQRVHSGEKPSGPSSG   46 (46)
T ss_dssp             CSCCSCCC-CCSEECSSSCCEESSHHHHHHHGGGGTSCCCCSTTCC
T ss_pred             CCCCCCCC-CcCeECCccccccCChHHHHHHHHHhCCCCCCCCCCC
Confidence            57777765 8999999999999999999999999999999999865

>2ytk_A Zinc finger protein 347; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.41  E-value=2.6e-13  Score=77.58  Aligned_cols=45  Identities=24%  Similarity=0.528  Sum_probs=40.8

Q ss_pred             CcccccCCCCcceeccccccccCChhHHHHHHHhhcCCCCCCCCCC
Q 044013           14 SDDETDAGTGRSYECVFCKRGFTTAQALGGHMNIHRKDRAKNRPPS   59 (153)
Q Consensus        14 ~h~~~~~~gekp~~C~~Cgk~F~~~~~L~~H~r~H~gekp~~C~~c   59 (153)
                      +|++.+++ ++||.|.+|++.|.....|..|+++|++++||.|+.|
T Consensus         2 ~H~~~H~~-~~~~~C~~C~k~f~~~~~L~~H~~~H~~~~~~~C~~c   46 (46)
T 2ytk_A            2 SSGSSGSG-EKPYKCNECGKVFTQNSHLTNHWRIHTGEKPSGPSSG   46 (46)
T ss_dssp             CCCCCSSS-SCSEECSSSCCEESSHHHHHHHHHHHSSSSCSSCCCC
T ss_pred             CCcccCCC-CCCEeCCcCCCccCCHHHHHHHHHHHCCCCCCCCCCC
Confidence            57777665 8999999999999999999999999999999999965

>2epz_A Zinc finger protein 28 homolog; C2H2, zinc finger domain, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.41  E-value=2.1e-13  Score=77.99  Aligned_cols=45  Identities=20%  Similarity=0.557  Sum_probs=40.2

Q ss_pred             CcccccCCCCcceeccccccccCChhHHHHHHHhhcCCCCCCCCCC
Q 044013           14 SDDETDAGTGRSYECVFCKRGFTTAQALGGHMNIHRKDRAKNRPPS   59 (153)
Q Consensus        14 ~h~~~~~~gekp~~C~~Cgk~F~~~~~L~~H~r~H~gekp~~C~~c   59 (153)
                      +|++.+++ ++||.|.+|++.|.....|..|+++|++++||.|+.|
T Consensus         2 ~H~~~H~~-~k~~~C~~C~k~f~~~~~L~~H~~~H~~~k~~~C~~C   46 (46)
T 2epz_A            2 SSGSSGTG-EKPFDCIDCGKAFSDHIGLNQHRRIHTGEKPSGPSSG   46 (46)
T ss_dssp             CCCSSCCC-CCSBCCTTTCCCBSSHHHHHHHHTTTTTCCCCSSCCC
T ss_pred             CCCCCcCC-CCCeECCCCCceeCCHHHHHHHHHHhCCCCCCCCCCC
Confidence            57777765 8899999999999999999999999999999999865

>2yt9_A Zinc finger-containing protein 1; C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1 g.37.1.1

Probab=99.41  E-value=4.6e-14  Score=92.28  Aligned_cols=68  Identities=18%  Similarity=0.403  Sum_probs=58.7

Q ss_pred             CCCcccccCCCCcceeccccccccCChhHHHHHHHhhcCC--CCCCCCCCCCCCCCCCccCCCCChhhhccccccCCC
Q 044013           12 SSSDDETDAGTGRSYECVFCKRGFTTAQALGGHMNIHRKD--RAKNRPPSSSSISDKLTFFPSPSTWDDHQRSVHTNN   87 (153)
Q Consensus        12 ~~~h~~~~~~gekp~~C~~Cgk~F~~~~~L~~H~r~H~ge--kp~~C~~c~~~~Cgk~~~F~~~~~L~~H~~~~Ht~~   87 (153)
                      |..|++.+.. ++||.|.+|++.|.....|..|+++|+++  +||.|+.|++.       |.....|..|++.+|+++
T Consensus        23 l~~H~~~h~~-~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~~~C~~C~~~-------f~~~~~L~~H~~~~H~~~   92 (95)
T 2yt9_A           23 LNRHKLSHSG-EKPYSCPVCGLRFKRKDRMSYHVRSHDGSVGKPYICQSCGKG-------FSRPDHLNGHIKQVHSGP   92 (95)
T ss_dssp             HHHHHHHSCS-SCSEECSSSCCEESCHHHHHHHHHHHCCCCCSSBCCSSSCCC-------BSSHHHHHHHHHHTSCCC
T ss_pred             HHHHHHhcCC-CCCCcCCCCCCccCCHHHHHHHHHHhcCCCCCceECCCccch-------hCCHHHHHHHHHHhcCCC
Confidence            5667776554 88999999999999999999999999997  99999966665       999999999985478775

>2eoo_A ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.41  E-value=2.3e-13  Score=77.87  Aligned_cols=45  Identities=22%  Similarity=0.486  Sum_probs=41.0

Q ss_pred             CcccccCCCCcceeccccccccCChhHHHHHHHhhcCCCCCCCCCC
Q 044013           14 SDDETDAGTGRSYECVFCKRGFTTAQALGGHMNIHRKDRAKNRPPS   59 (153)
Q Consensus        14 ~h~~~~~~gekp~~C~~Cgk~F~~~~~L~~H~r~H~gekp~~C~~c   59 (153)
                      +|++.+++ ++||.|++|++.|.....|..|+++|++++||.|+.|
T Consensus         2 ~H~~~H~~-~k~~~C~~C~k~F~~~~~L~~H~~~H~~~k~~~C~~C   46 (46)
T 2eoo_A            2 SSGSSGSG-ERPYGCNECGKNFGRHSHLIEHLKRHFREKSSGPSSG   46 (46)
T ss_dssp             CCCCCCSC-CCCEECSSSCCEESSHHHHHHHHHHHHSTTSSCCSCC
T ss_pred             CCCCCCCC-CCCEEccccCcccCCHHHHHHHHHHHcCCCCCCCCCC
Confidence            57777765 8999999999999999999999999999999999865

>2yu8_A Zinc finger protein 347; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.41  E-value=2e-13  Score=78.08  Aligned_cols=45  Identities=22%  Similarity=0.495  Sum_probs=40.8

Q ss_pred             CcccccCCCCcceeccccccccCChhHHHHHHHhhcCCCCCCCCCC
Q 044013           14 SDDETDAGTGRSYECVFCKRGFTTAQALGGHMNIHRKDRAKNRPPS   59 (153)
Q Consensus        14 ~h~~~~~~gekp~~C~~Cgk~F~~~~~L~~H~r~H~gekp~~C~~c   59 (153)
                      .|++.+++ ++||.|.+|++.|.....|..|+++|++++||.|+.|
T Consensus         2 ~H~~~H~~-~k~~~C~~C~k~f~~~~~L~~H~~~H~~~~~~~C~~C   46 (46)
T 2yu8_A            2 SSGSSGTG-EKPYKCNECGKVFTQNSHLARHRRVHTGGKPSGPSSG   46 (46)
T ss_dssp             CCCCCCCC-CSSEECSSSCCEESSSHHHHHHTHHHHSCCCSCSCCC
T ss_pred             CcCcCCCC-CCCeECCcCCchhCCHHHHHHHHHhcCCCCCCCCCCC
Confidence            57777765 8999999999999999999999999999999999865

>2eoq_A Zinc finger protein 224; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.40  E-value=2.6e-13  Score=77.58  Aligned_cols=45  Identities=18%  Similarity=0.510  Sum_probs=39.9

Q ss_pred             CcccccCCCCcceeccccccccCChhHHHHHHHhhcCCCCCCCCCC
Q 044013           14 SDDETDAGTGRSYECVFCKRGFTTAQALGGHMNIHRKDRAKNRPPS   59 (153)
Q Consensus        14 ~h~~~~~~gekp~~C~~Cgk~F~~~~~L~~H~r~H~gekp~~C~~c   59 (153)
                      .|++.+++ ++||.|++|++.|.....|..|+++|++++||.|+.|
T Consensus         2 ~H~~~H~~-~~~~~C~~C~k~f~~~~~L~~H~~~H~~~k~~~C~~C   46 (46)
T 2eoq_A            2 SSGSSGTG-EKPFKCDICGKSFCGRSRLNRHSMVHTAEKPSGPSSG   46 (46)
T ss_dssp             CCCCCSSS-SCSCCCSSSCCCCSSHHHHHHHHHHTTCCCSSSCCCC
T ss_pred             CCCCCCCC-CCCcCCCcCCchhCCHHHHHHHHHHcCCCCCCCCCCC
Confidence            56777665 8899999999999999999999999999999999865

>2en6_A Zinc finger protein 268; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.40  E-value=2.7e-13  Score=77.51  Aligned_cols=45  Identities=20%  Similarity=0.499  Sum_probs=41.1

Q ss_pred             CcccccCCCCcceeccccccccCChhHHHHHHHhhcCCCCCCCCCC
Q 044013           14 SDDETDAGTGRSYECVFCKRGFTTAQALGGHMNIHRKDRAKNRPPS   59 (153)
Q Consensus        14 ~h~~~~~~gekp~~C~~Cgk~F~~~~~L~~H~r~H~gekp~~C~~c   59 (153)
                      +|++++++ ++||.|.+|++.|.....|..|+++|++++||.|+.|
T Consensus         2 ~h~~~H~~-~~~~~C~~C~k~f~~~~~L~~H~~~H~~~k~~~C~~C   46 (46)
T 2en6_A            2 SSGSSGSG-EKPYGCNECGKTFSQKSILSAHQRTHTGEKPSGPSSG   46 (46)
T ss_dssp             CCSCCCCS-SCCEEETTTTEEESSHHHHHHHHHHHSSCCCSSSCCC
T ss_pred             CCCCccCC-CcCeECCCCCcccCchHHHHHHHHHcCCCCCCCCCCC
Confidence            57777766 8999999999999999999999999999999999965

>2eop_A Zinc finger protein 268; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.40  E-value=2.4e-13  Score=77.64  Aligned_cols=45  Identities=22%  Similarity=0.408  Sum_probs=39.8

Q ss_pred             CcccccCCCCcceeccccccccCChhHHHHHHHhhcCCCCCCCCCC
Q 044013           14 SDDETDAGTGRSYECVFCKRGFTTAQALGGHMNIHRKDRAKNRPPS   59 (153)
Q Consensus        14 ~h~~~~~~gekp~~C~~Cgk~F~~~~~L~~H~r~H~gekp~~C~~c   59 (153)
                      .|++.+++ ++||.|.+|++.|.....|..|+++|++++||.|+.|
T Consensus         2 ~H~~~H~~-~~~~~C~~C~k~f~~~~~L~~H~~~H~~~k~~~C~~C   46 (46)
T 2eop_A            2 SSGSSGTG-EKPHECRECGKSFSFNSQLIVHQRIHTGENPSGPSSG   46 (46)
T ss_dssp             CCCCSCCC-CCSCBCTTTCCBCSSHHHHHHHHTTTTTSCCSCCCCC
T ss_pred             CCccccCC-CCCeeCCCCCchhCCHHHHHHHHHHcCCCCCCCCCCC
Confidence            56777665 8899999999999999999999999999999999865

>2ytj_A Zinc finger protein 484; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.40  E-value=2.8e-13  Score=77.42  Aligned_cols=45  Identities=27%  Similarity=0.524  Sum_probs=40.6

Q ss_pred             CcccccCCCCcceeccccccccCChhHHHHHHHhhcCCCCCCCCCC
Q 044013           14 SDDETDAGTGRSYECVFCKRGFTTAQALGGHMNIHRKDRAKNRPPS   59 (153)
Q Consensus        14 ~h~~~~~~gekp~~C~~Cgk~F~~~~~L~~H~r~H~gekp~~C~~c   59 (153)
                      +|++.+++ ++||.|.+|++.|.....|..|+++|++++||.|+.|
T Consensus         2 ~H~~~H~~-~k~~~C~~C~k~f~~~~~L~~H~~~H~~~k~~~C~~c   46 (46)
T 2ytj_A            2 SSGSSGTG-EKPYICAECGKAFTIRSNLIKHQKIHTKQKPSGPSSG   46 (46)
T ss_dssp             CSSCTTSS-CCSEECSSSCCEESSHHHHHHHHHHTSCCCCSSCSCC
T ss_pred             CcccCCCC-CcCeECCCCChhhCCHHHHHHHHHHcCCCCCCCCCCC
Confidence            57777765 8999999999999999999999999999999999865

>2ysp_A Zinc finger protein 224; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.40  E-value=2.3e-13  Score=77.82  Aligned_cols=45  Identities=22%  Similarity=0.561  Sum_probs=41.1

Q ss_pred             CcccccCCCCcceeccccccccCChhHHHHHHHhhcCCCCCCCCCC
Q 044013           14 SDDETDAGTGRSYECVFCKRGFTTAQALGGHMNIHRKDRAKNRPPS   59 (153)
Q Consensus        14 ~h~~~~~~gekp~~C~~Cgk~F~~~~~L~~H~r~H~gekp~~C~~c   59 (153)
                      +|++.+++ ++||.|++|++.|.....|..|+++|++++||.|+.|
T Consensus         2 ~H~~~h~~-~k~~~C~~C~k~f~~~~~L~~H~~~H~~~~~~~C~~C   46 (46)
T 2ysp_A            2 SSGSSGTG-EKPYKCEKCGKGYNSKFNLDMHQKVHTGERPSGPSSG   46 (46)
T ss_dssp             CCCCCCSS-CCSEEETTTTEEESCHHHHHHHHTTSCSCCSSCCSCC
T ss_pred             CCCcCCCC-CCCeECCCCCCccCCHHHHHHHHHhhCCCCCCCCCCC
Confidence            57777765 8999999999999999999999999999999999865

>2epw_A Zinc finger protein 268; C2H2, zinc finger domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.40  E-value=3.1e-13  Score=77.20  Aligned_cols=45  Identities=20%  Similarity=0.381  Sum_probs=40.5

Q ss_pred             CcccccCCCCcceeccccccccCChhHHHHHHHhhcCCCCCCCCCC
Q 044013           14 SDDETDAGTGRSYECVFCKRGFTTAQALGGHMNIHRKDRAKNRPPS   59 (153)
Q Consensus        14 ~h~~~~~~gekp~~C~~Cgk~F~~~~~L~~H~r~H~gekp~~C~~c   59 (153)
                      .|++.+++ ++||.|.+|++.|.....|..|+++|++++||.|+.|
T Consensus         2 ~H~~~H~~-~k~~~C~~C~k~F~~~~~L~~H~~~H~~~k~~~C~~C   46 (46)
T 2epw_A            2 SSGSSGTG-EKPCKCTECGKAFCWKSQLIMHQRTHVDDKHSGPSSG   46 (46)
T ss_dssp             CCCCCCCC-CCSEECSSSCCEESSSHHHHHHHHHCCSCCCSCCCCC
T ss_pred             cCcccCCC-CCCeeCCCCCCccCCHHHHHHHHHHhCCCCCCCCCCC
Confidence            56777665 8999999999999999999999999999999999865

>2ep2_A Zinc finger protein 484; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.40  E-value=3.2e-13  Score=77.20  Aligned_cols=45  Identities=27%  Similarity=0.592  Sum_probs=40.6

Q ss_pred             CcccccCCCCcceeccccccccCChhHHHHHHHhhcCCCCCCCCCC
Q 044013           14 SDDETDAGTGRSYECVFCKRGFTTAQALGGHMNIHRKDRAKNRPPS   59 (153)
Q Consensus        14 ~h~~~~~~gekp~~C~~Cgk~F~~~~~L~~H~r~H~gekp~~C~~c   59 (153)
                      .|++.+++ ++||.|.+|++.|.....|..|+++|++++||.|+.|
T Consensus         2 ~H~~~H~~-~k~~~C~~C~k~f~~~~~L~~H~~~H~~~k~~~C~~c   46 (46)
T 2ep2_A            2 SSGSSGTG-EKPYECSICGKSFTKKSQLHVHQQIHTGEKPSGPSSG   46 (46)
T ss_dssp             CSSSCSSC-CCSEECSSSCCEESSHHHHHHHHHTTSSCCSCCSCCC
T ss_pred             CCCCCCCC-CcCcCCCCCCcccCCHHHHHHHHHHhCCCCCCCCCCC
Confidence            56777665 8999999999999999999999999999999999865

>2ytr_A Zinc finger protein 347; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.40  E-value=2.3e-13  Score=77.72  Aligned_cols=45  Identities=22%  Similarity=0.556  Sum_probs=39.3

Q ss_pred             CcccccCCCCcceeccccccccCChhHHHHHHHhhcCCCCCCCCCC
Q 044013           14 SDDETDAGTGRSYECVFCKRGFTTAQALGGHMNIHRKDRAKNRPPS   59 (153)
Q Consensus        14 ~h~~~~~~gekp~~C~~Cgk~F~~~~~L~~H~r~H~gekp~~C~~c   59 (153)
                      +|++++++ ++||.|.+|++.|.....|..|+++|++++||.|+.|
T Consensus         2 ~H~~~H~~-~k~~~C~~C~k~f~~~~~L~~H~~~H~~~~~~~C~~C   46 (46)
T 2ytr_A            2 SSGSSGTG-EKPYKCNECGKAFSQTSKLARHQRIHTGEKPSGPSSG   46 (46)
T ss_dssp             CSSCCCSS-CCTTCCTTTCCCCSSHHHHHHHHTTTTTCSCCCSCCC
T ss_pred             CCCcCCCC-CcCcCCCCCCCccCCHHHHHHHHHhcCCCCCCCCCCC
Confidence            56777665 8899999999999999999999999999999999865

>2ytd_A Zinc finger protein 473; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.40  E-value=3.2e-13  Score=77.23  Aligned_cols=45  Identities=24%  Similarity=0.509  Sum_probs=40.8

Q ss_pred             CcccccCCCCcceeccccccccCChhHHHHHHHhhcCCCCCCCCCC
Q 044013           14 SDDETDAGTGRSYECVFCKRGFTTAQALGGHMNIHRKDRAKNRPPS   59 (153)
Q Consensus        14 ~h~~~~~~gekp~~C~~Cgk~F~~~~~L~~H~r~H~gekp~~C~~c   59 (153)
                      +|++.+++ ++||.|.+|++.|.....|..|+++|++++||.|+.|
T Consensus         2 ~H~~~H~~-~k~~~C~~C~k~f~~~~~L~~H~~~H~~~~~~~C~~C   46 (46)
T 2ytd_A            2 SSGSSGSG-EKPYKCSECGKAFHRHTHLNEHRRIHTGYRPSGPSSG   46 (46)
T ss_dssp             CCCCCSCC-CCSEECSSSCCEESSHHHHHHHHHHHTCCCSSCSSCC
T ss_pred             CCccccCC-CcCeECCCCCCeeCChHHHHHHHHHcCCCCCCCCCCC
Confidence            56777665 8999999999999999999999999999999999865

>2eq0_A Zinc finger protein 347; C2H2, zinc finger domain, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.40  E-value=2.8e-13  Score=77.48  Aligned_cols=45  Identities=22%  Similarity=0.482  Sum_probs=40.3

Q ss_pred             CcccccCCCCcceeccccccccCChhHHHHHHHhhcCCCCCCCCCC
Q 044013           14 SDDETDAGTGRSYECVFCKRGFTTAQALGGHMNIHRKDRAKNRPPS   59 (153)
Q Consensus        14 ~h~~~~~~gekp~~C~~Cgk~F~~~~~L~~H~r~H~gekp~~C~~c   59 (153)
                      .|++.+++ ++||.|.+|++.|.....|..|+++|++++||.|+.|
T Consensus         2 ~H~~~H~~-~k~~~C~~C~k~F~~~~~L~~H~~~H~~~k~~~C~~c   46 (46)
T 2eq0_A            2 SSGSSGTG-EKPYKCHECGKVFRRNSHLARHQLIHTGEKPSGPSSG   46 (46)
T ss_dssp             CCCCCTTC-CCCEECTTTCCEESSHHHHHHHHTTTCCCCCSCCSCC
T ss_pred             CCCcCCCC-CCCeECCCCCchhCCHHHHHHHHHHcCCCCCCCCCCC
Confidence            46676665 8999999999999999999999999999999999865

>2ytg_A ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.40  E-value=1.9e-13  Score=78.17  Aligned_cols=45  Identities=16%  Similarity=0.463  Sum_probs=40.0

Q ss_pred             CcccccCCCCcceeccccccccCChhHHHHHHHhhcCCCCCCCCCC
Q 044013           14 SDDETDAGTGRSYECVFCKRGFTTAQALGGHMNIHRKDRAKNRPPS   59 (153)
Q Consensus        14 ~h~~~~~~gekp~~C~~Cgk~F~~~~~L~~H~r~H~gekp~~C~~c   59 (153)
                      +|++.+++ ++||.|.+|++.|.....|..|+++|++++||.|+.|
T Consensus         2 ~H~~~H~~-~~~~~C~~C~k~f~~~~~L~~H~~~H~~~k~~~C~~C   46 (46)
T 2ytg_A            2 SSGSSGTG-EKPFKCGECGKSYNQRVHLTQHQRVHTGEKPSGPSSG   46 (46)
T ss_dssp             CCCCCCSS-CCSEECTTTCCEESSSHHHHTTGGGGSSCCSSCSCCC
T ss_pred             CCCCCCCC-CCCeECCCCCcccCCHHHHHHHHHHcCCCCCCCCCCC
Confidence            57777665 8899999999999999999999999999999999865

>2em5_A ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=99.40  E-value=2.8e-13  Score=77.51  Aligned_cols=45  Identities=27%  Similarity=0.503  Sum_probs=40.7

Q ss_pred             CcccccCCCCcceeccccccccCChhHHHHHHHhhcCCCCCCCCCC
Q 044013           14 SDDETDAGTGRSYECVFCKRGFTTAQALGGHMNIHRKDRAKNRPPS   59 (153)
Q Consensus        14 ~h~~~~~~gekp~~C~~Cgk~F~~~~~L~~H~r~H~gekp~~C~~c   59 (153)
                      +|++.+++ ++||.|.+|++.|.....|..|+++|++++||.|+.|
T Consensus         2 ~H~~~H~~-~~~~~C~~C~k~f~~~~~L~~H~~~H~~~~~~~C~~C   46 (46)
T 2em5_A            2 SSGSSGSS-TKSHQCHECGRGFTLKSHLNQHQRIHTGEKPSGPSSG   46 (46)
T ss_dssp             CCCCCCCC-SCSEECSSSCCEESSHHHHHHHHTTTSCSCCSSCCCC
T ss_pred             CCcCCCCC-CCCeECCcCCCccCCHHHHHHHHHHhCCCCCCCCCCC
Confidence            57777765 8999999999999999999999999999999999866

>2eme_A Zinc finger protein 473; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.40  E-value=3.4e-13  Score=76.99  Aligned_cols=45  Identities=22%  Similarity=0.545  Sum_probs=40.7

Q ss_pred             CcccccCCCCcceeccccccccCChhHHHHHHHhhcCCCCCCCCCC
Q 044013           14 SDDETDAGTGRSYECVFCKRGFTTAQALGGHMNIHRKDRAKNRPPS   59 (153)
Q Consensus        14 ~h~~~~~~gekp~~C~~Cgk~F~~~~~L~~H~r~H~gekp~~C~~c   59 (153)
                      +|++.+++ ++||.|++|++.|.....|..|+++|++++||.|+.|
T Consensus         2 ~H~~~H~~-~k~~~C~~C~k~f~~~~~L~~H~~~H~~~~~~~C~~C   46 (46)
T 2eme_A            2 SSGSSGSG-EKPYVCDYCGKAFGLSAELVRHQRIHTGEKPSGPSSG   46 (46)
T ss_dssp             CCCCTTCC-CCSEECSSSCCEESSHHHHHHHHGGGCCCSCCSSCCC
T ss_pred             CCCCCCCC-CCCeECCCCChhhCCHHHHHHHHHhcCCCCCCCCCCC
Confidence            57777765 8999999999999999999999999999999999865

>2ep3_A Zinc finger protein 484; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.40  E-value=3e-13  Score=77.34  Aligned_cols=46  Identities=24%  Similarity=0.519  Sum_probs=40.9

Q ss_pred             CCcccccCCCCcceeccccccccCChhHHHHHHHhhcCCCCCCCCCC
Q 044013           13 SSDDETDAGTGRSYECVFCKRGFTTAQALGGHMNIHRKDRAKNRPPS   59 (153)
Q Consensus        13 ~~h~~~~~~gekp~~C~~Cgk~F~~~~~L~~H~r~H~gekp~~C~~c   59 (153)
                      ++|++.+++ ++||.|.+|++.|.....|..|+++|++++||.|++|
T Consensus         1 ~~H~~~H~~-~k~~~C~~C~k~f~~~~~L~~H~~~H~~~~~~~C~~~   46 (46)
T 2ep3_A            1 GSSGSSGTG-EKPYRCAECGKAFTDRSNLFTHQKIHTGEKPSGPSSG   46 (46)
T ss_dssp             CCCCSSSSC-CCSEECSSSCCEESSHHHHHHHHTTTTTSCCCCTTCC
T ss_pred             CCCCCCCCC-CCCeECCCCCchhCCHHHHHHHHHHcCCCCCCCCCCC
Confidence            357777766 8999999999999999999999999999999999854

>2yso_A ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=99.40  E-value=3.6e-13  Score=76.98  Aligned_cols=45  Identities=18%  Similarity=0.254  Sum_probs=40.7

Q ss_pred             CcccccCCCCcceeccccccccCChhHHHHHHHhhcCCCCCCCCCC
Q 044013           14 SDDETDAGTGRSYECVFCKRGFTTAQALGGHMNIHRKDRAKNRPPS   59 (153)
Q Consensus        14 ~h~~~~~~gekp~~C~~Cgk~F~~~~~L~~H~r~H~gekp~~C~~c   59 (153)
                      .|++.+++ ++||.|.+|++.|.....|..|+++|++++||.|+.|
T Consensus         2 ~H~~~H~~-~~~~~C~~C~k~f~~~~~L~~H~~~H~~~k~~~C~~C   46 (46)
T 2yso_A            2 SSGSSGSR-EKSHQCRECGEIFFQYVSLIEHQVLHMGQKNSGPSSG   46 (46)
T ss_dssp             CCSCCSSC-CCCEECTTTCCEESSHHHHHHHHHHHSCCSCCCTTCC
T ss_pred             CcccccCC-CCCEEccccChhhCCHHHHHHHHHHhCCCCCCCCCCC
Confidence            56777765 8899999999999999999999999999999999865

>2ytm_A Zinc finger protein 28 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.39  E-value=3e-13  Score=77.49  Aligned_cols=45  Identities=20%  Similarity=0.510  Sum_probs=40.6

Q ss_pred             CcccccCCCCcceeccccccccCChhHHHHHHHhhcCCCCCCCCCC
Q 044013           14 SDDETDAGTGRSYECVFCKRGFTTAQALGGHMNIHRKDRAKNRPPS   59 (153)
Q Consensus        14 ~h~~~~~~gekp~~C~~Cgk~F~~~~~L~~H~r~H~gekp~~C~~c   59 (153)
                      +|++.+++ ++||.|.+|++.|.....|..|+++|++++||.|+.|
T Consensus         2 ~h~~~h~~-~k~~~C~~C~k~f~~~~~L~~H~~~H~~~~~~~C~~C   46 (46)
T 2ytm_A            2 SSGSSGTG-EKPYKCMECGKAFGDNSSCTQHQRLHTGQRPSGPSSG   46 (46)
T ss_dssp             CSCCCCSS-CCSSSBTTTTBCCSSHHHHHHHHHHHHSCCCCCCCCC
T ss_pred             CCCcCCCC-CCCcCCCCCCchhCCHHHHHHHHHHcCCCCCCCCCCC
Confidence            56677665 8999999999999999999999999999999999865

>2en8_A Zinc finger protein 224; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=99.39  E-value=2.9e-13  Score=77.31  Aligned_cols=45  Identities=22%  Similarity=0.412  Sum_probs=40.5

Q ss_pred             CcccccCCCCcceeccccccccCChhHHHHHHHhhcCCCCCCCCCC
Q 044013           14 SDDETDAGTGRSYECVFCKRGFTTAQALGGHMNIHRKDRAKNRPPS   59 (153)
Q Consensus        14 ~h~~~~~~gekp~~C~~Cgk~F~~~~~L~~H~r~H~gekp~~C~~c   59 (153)
                      +|++.+++ ++||.|++|++.|.....|..|+++|++++||.|+.|
T Consensus         2 ~H~~~H~~-~~~~~C~~C~k~f~~~~~L~~H~~~H~~~k~~~C~~C   46 (46)
T 2en8_A            2 SSGSSGSG-EKSHTCDECGKNFCYISALRIHQRVHMGEKCSGPSSG   46 (46)
T ss_dssp             CCCCCCCC-CSSEECTTTCCEESSHHHHHHHHTTTCCSCSSCCSCC
T ss_pred             CccccCCC-CCCeECCCcCcccCCHHHHHHHHHHhCCCCCCCCCCC
Confidence            57777665 8999999999999999999999999999999999865

>2el6_A Zinc finger protein 268; alternative splicing, DNA-binding, metal-binding, nuclear protein, repeat, transcription, transcription regulation; NMR {Homo sapiens}

Probab=99.39  E-value=3.8e-13  Score=76.97  Aligned_cols=45  Identities=22%  Similarity=0.502  Sum_probs=40.5

Q ss_pred             CcccccCCCCcceeccccccccCChhHHHHHHHhhcCCCCCCCCCC
Q 044013           14 SDDETDAGTGRSYECVFCKRGFTTAQALGGHMNIHRKDRAKNRPPS   59 (153)
Q Consensus        14 ~h~~~~~~gekp~~C~~Cgk~F~~~~~L~~H~r~H~gekp~~C~~c   59 (153)
                      +|++.+++ ++||.|.+|++.|.....|..|+++|++++||.|..|
T Consensus         2 ~h~~~h~~-~k~~~C~~C~k~f~~~~~L~~H~~~H~~~~~~~C~~C   46 (46)
T 2el6_A            2 SSGSSGAG-VNPYKCSQCEKSFSGKLRLLVHQRMHTREKPSGPSSG   46 (46)
T ss_dssp             CSCCSSCC-CCSEECSSSSCEESSHHHHHHHHGGGCCSSCCSCCCC
T ss_pred             CCCCCCCC-CCCeECCCCCcccCCHHHHHHHHHHcCCCCCCCCCCC
Confidence            46666665 8999999999999999999999999999999999865

>2enc_A Zinc finger protein 224; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=99.39  E-value=3.5e-13  Score=77.05  Aligned_cols=45  Identities=20%  Similarity=0.469  Sum_probs=40.5

Q ss_pred             CcccccCCCCcceeccccccccCChhHHHHHHHhhcCCCCCCCCCC
Q 044013           14 SDDETDAGTGRSYECVFCKRGFTTAQALGGHMNIHRKDRAKNRPPS   59 (153)
Q Consensus        14 ~h~~~~~~gekp~~C~~Cgk~F~~~~~L~~H~r~H~gekp~~C~~c   59 (153)
                      +|++.+++ ++||.|.+|++.|.....|..|+++|++++||.|+.|
T Consensus         2 ~h~~~H~~-~k~~~C~~C~k~f~~~~~L~~H~~~H~~~~~~~C~~C   46 (46)
T 2enc_A            2 SSGSSGSG-EKPFKCEECGKGFYTNSQCYSHQRSHSGEKPSGPSSG   46 (46)
T ss_dssp             CCSSCCCC-CCSEECSSSCCEESSHHHHHHHHHHSCCSSCCSSCCC
T ss_pred             CCCCCCCC-CCCcCCCCCCCcCCChHHHHHHHHHhCCCCCCCCCCC
Confidence            46677665 8999999999999999999999999999999999865

>2em8_A Zinc finger protein 224; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.39  E-value=3.5e-13  Score=77.10  Aligned_cols=45  Identities=22%  Similarity=0.547  Sum_probs=40.8

Q ss_pred             CcccccCCCCcceeccccccccCChhHHHHHHHhhcCCCCCCCCCC
Q 044013           14 SDDETDAGTGRSYECVFCKRGFTTAQALGGHMNIHRKDRAKNRPPS   59 (153)
Q Consensus        14 ~h~~~~~~gekp~~C~~Cgk~F~~~~~L~~H~r~H~gekp~~C~~c   59 (153)
                      +|++.+++ ++||.|++|++.|.....|..|+++|++++||.|+.|
T Consensus         2 ~h~~~h~~-~k~~~C~~C~k~f~~~~~L~~H~~~H~~~~~~~C~~C   46 (46)
T 2em8_A            2 SSGSSGSG-EKPYKCVECGKGYKRRLDLDFHQRVHTGEKLSGPSSG   46 (46)
T ss_dssp             CCCCCCCS-CCSEECSSSCCEESSHHHHHHHHHHHHCCCCCCSCCC
T ss_pred             CCCCCCCC-CCCeECcccCchhCCHHHHHHHHHHHcCCCCCCCCCC
Confidence            56676665 8999999999999999999999999999999999965

>2en1_A Zinc finger protein 224; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.39  E-value=3.8e-13  Score=76.88  Aligned_cols=45  Identities=20%  Similarity=0.523  Sum_probs=40.7

Q ss_pred             CcccccCCCCcceeccccccccCChhHHHHHHHhhcCCCCCCCCCC
Q 044013           14 SDDETDAGTGRSYECVFCKRGFTTAQALGGHMNIHRKDRAKNRPPS   59 (153)
Q Consensus        14 ~h~~~~~~gekp~~C~~Cgk~F~~~~~L~~H~r~H~gekp~~C~~c   59 (153)
                      .|++.+++ ++||.|.+|++.|.....|..|+++|++++||.|+.|
T Consensus         2 ~H~~~H~~-~~~~~C~~C~k~f~~~~~L~~H~~~H~~~~~~~C~~C   46 (46)
T 2en1_A            2 SSGSSGSG-EKPFKCEECGKRFTQNSQLHSHQRVHTGEKPSGPSSG   46 (46)
T ss_dssp             CSTTCCCC-CCSEEETTTTEEESSHHHHHHHGGGGSCCCCSCCCCC
T ss_pred             CcccCCCC-CCCeeCCCCCcccCCHHHHHHHHHHcCCCCCCCCCCC
Confidence            57777665 8999999999999999999999999999999999865

>2j7j_A Transcription factor IIIA; zinc finger module, alternative initiation, nuclear protein, phosphorylation, hydrophobic core, zinc, RNA-binding; 1.65A {Xenopus laevis} SCOP: g.37.1.1 g.37.1.1 g.37.1.1 PDB: 1un6_B 2hgh_A

Probab=99.39  E-value=4.8e-14  Score=90.04  Aligned_cols=67  Identities=21%  Similarity=0.321  Sum_probs=60.3

Q ss_pred             ceec--cccccccCChhHHHHHHHhhcCCCCCCCCC--CCCCCCCCCccCCCCChhhhccccccCCCCCCCCCCC---Cc
Q 044013           25 SYEC--VFCKRGFTTAQALGGHMNIHRKDRAKNRPP--SSSSISDKLTFFPSPSTWDDHQRSVHTNNNNHSNYDS---YG   97 (153)
Q Consensus        25 p~~C--~~Cgk~F~~~~~L~~H~r~H~gekp~~C~~--c~~~~Cgk~~~F~~~~~L~~H~~~~Ht~~kp~~~~~~---~~   97 (153)
                      ||.|  .+|++.|.....|..|+++|++++||.|+.  |++.       |.....|..|++ +|++   | .|..   |+
T Consensus         1 p~~C~~~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~~~C~~~-------f~~~~~l~~H~~-~h~~---~-~C~~~~~C~   68 (85)
T 2j7j_A            1 MYVCHFENCGKAFKKHNQLKVHQFSHTQQLPYECPHEGCDKR-------FSLPSRLKRHEK-VHAG---Y-PCKKDDSCS   68 (85)
T ss_dssp             CEECCSTTCCCEESSHHHHHHHHHHHHTTCCEECCSTTCCCE-------ESSHHHHHHHHH-HHHS---E-ECCSCSSCC
T ss_pred             CccCCCCCCCcccCCHHHHHHHHHHhCCCCCeeCCCCCCcCc-------cCCHHHHHHHHH-HhCC---C-CCCCCCCCC
Confidence            7999  899999999999999999999999999985  6665       999999999999 9998   6 6788   99


Q ss_pred             cccccC
Q 044013           98 QNYHQH  103 (153)
Q Consensus        98 ~~f~~~  103 (153)
                      +.|...
T Consensus        69 ~~f~~~   74 (85)
T 2j7j_A           69 FVGKTW   74 (85)
T ss_dssp             CEESSH
T ss_pred             CccCCH
Confidence            999543

>2ej4_A Zinc finger protein ZIC 3; ZF-C2H2 domain, zinc binding, structural genomics, NPPSFA; NMR {Homo sapiens}

Probab=99.38  E-value=2e-13  Score=89.28  Aligned_cols=61  Identities=26%  Similarity=0.355  Sum_probs=54.4

Q ss_pred             CcceeccccccccCChhHHHHHHHh-hcCCCC--------CCCCCCCCCCCCCCccCCCCChhhhccccccCCCCCCC
Q 044013           23 GRSYECVFCKRGFTTAQALGGHMNI-HRKDRA--------KNRPPSSSSISDKLTFFPSPSTWDDHQRSVHTNNNNHS   91 (153)
Q Consensus        23 ekp~~C~~Cgk~F~~~~~L~~H~r~-H~gekp--------~~C~~c~~~~Cgk~~~F~~~~~L~~H~~~~Ht~~kp~~   91 (153)
                      ...|.|.+|++.|.....|..|+++ |++++|        |.|..|++.       |.....|..|++ +|++++||.
T Consensus        23 ~~~~~C~~C~k~f~~~~~L~~H~~~~H~~~~~~~~~~c~~~~C~~C~k~-------f~~~~~L~~H~~-~H~~~k~~~   92 (95)
T 2ej4_A           23 QLSRPKKSCDRTFSTMHELVTHVTMEHVGGPEQNNHVCYWEECPREGKS-------FKAKYKLVNHIR-VHTGEKSGP   92 (95)
T ss_dssp             CSSSSCCCCCCCCSSHHHHHHHHHHTTTCCTTCSCCCCCCTTCSSTTCC-------CSSHHHHHHHHH-HHHTCCCCS
T ss_pred             cCCCcccccccccCCHHHHHHHHHHhccCCCCCCccceeccCCCCCCcc-------cCCHHHHHHHHH-hcCCCCCCC
Confidence            3457899999999999999999998 999988        888855555       999999999999 999999993

>2emx_A Zinc finger protein 268; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=99.38  E-value=4.1e-13  Score=76.04  Aligned_cols=44  Identities=16%  Similarity=0.472  Sum_probs=39.1

Q ss_pred             cccccCCCCcceeccccccccCChhHHHHHHHhhcCCCCCCCCCC
Q 044013           15 DDETDAGTGRSYECVFCKRGFTTAQALGGHMNIHRKDRAKNRPPS   59 (153)
Q Consensus        15 h~~~~~~gekp~~C~~Cgk~F~~~~~L~~H~r~H~gekp~~C~~c   59 (153)
                      |++.+++ ++||.|.+|++.|.....|..|+++|++++||.|+.|
T Consensus         1 H~~~H~~-~k~~~C~~C~k~f~~~~~L~~H~~~H~~~~~~~C~~C   44 (44)
T 2emx_A            1 GSSGSSG-EKPFGCSCCEKAFSSKSYLLVHQQTHAEEKPSGPSSG   44 (44)
T ss_dssp             CCCCCSS-CCCEECSSSSCEESSHHHHHHHHHHHTSSCSCSCCCC
T ss_pred             CCCCcCC-CcCccCCCCCcccCCHHHHHHHHHHhCCCCCCCCCCC
Confidence            4555554 8999999999999999999999999999999999865

>2ebt_A Krueppel-like factor 5; C2H2-type zinc-finger, metal BIND, transcription factor, kruppel-like factor, GC-box promoter elements, structural genomics; NMR {Homo sapiens}

Probab=99.37  E-value=7.1e-14  Score=92.08  Aligned_cols=66  Identities=21%  Similarity=0.349  Sum_probs=57.7

Q ss_pred             CCCcccccCCCCcceecc--ccccccCChhHHHHHHHhhcCCCCCCCCCCCCCCCCCCccCCCCChhhhccccccCC
Q 044013           12 SSSDDETDAGTGRSYECV--FCKRGFTTAQALGGHMNIHRKDRAKNRPPSSSSISDKLTFFPSPSTWDDHQRSVHTN   86 (153)
Q Consensus        12 ~~~h~~~~~~gekp~~C~--~Cgk~F~~~~~L~~H~r~H~gekp~~C~~c~~~~Cgk~~~F~~~~~L~~H~~~~Ht~   86 (153)
                      |..|++.+.. ++||.|.  .|++.|.....|..|+++|++++||.|+.|++.       |.....|..|++ +|++
T Consensus        33 l~~H~~~h~~-~~~~~C~~~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~C~~~-------f~~~~~l~~H~~-~H~~  100 (100)
T 2ebt_A           33 LKAHLRTHTG-EKPYKCTWEGCDWRFARSDELTRHYRKHTGAKPFQCGVCNRS-------FSRSDHLALHMK-RHQN  100 (100)
T ss_dssp             HHHHHHHHSC-CCCEECCSSSCCCEESSHHHHHHHHHHHTSCCSCBCSSSCCB-------CSSHHHHHHHHH-HHCC
T ss_pred             HHHHHHHhCC-CCCeeCCCCCCCCccCCHHHHHHHHHHhCCCCCeECCCCcCc-------cCCHHHHHHHHH-HhCC
Confidence            5566666655 8899996  599999999999999999999999999966655       999999999999 8874

>2em2_A Zinc finger protein 28 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.37  E-value=5.8e-13  Score=76.18  Aligned_cols=45  Identities=20%  Similarity=0.544  Sum_probs=40.6

Q ss_pred             CcccccCCCCcceeccccccccCChhHHHHHHHhhcCCCCCCCCCC
Q 044013           14 SDDETDAGTGRSYECVFCKRGFTTAQALGGHMNIHRKDRAKNRPPS   59 (153)
Q Consensus        14 ~h~~~~~~gekp~~C~~Cgk~F~~~~~L~~H~r~H~gekp~~C~~c   59 (153)
                      +|++.+++ ++||.|.+|++.|.....|..|+++|++++||.|+.|
T Consensus         2 ~H~~~H~~-~k~~~C~~C~k~f~~~~~L~~H~~~H~~~k~~~C~~~   46 (46)
T 2em2_A            2 SSGSSGSG-EKPFKCKECGKAFRQNIHLASHLRIHTGEKPSGPSSG   46 (46)
T ss_dssp             CCCCSCCC-CCSEECSSSCCEESSHHHHHHHHHHHCCCCSSCSSCC
T ss_pred             CCCCCCCC-CCCEECCcCCchhCCHHHHHHHHHHhCCCCCCCCCCC
Confidence            57777765 8999999999999999999999999999999999854

>1wjp_A Zinc finger protein 295; ZF-C2H2 domain, zinc binding, nucleic acid binding, KIAA1227 protein, structural genomics; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1 g.37.1.1

Probab=99.36  E-value=1.5e-14  Score=97.03  Aligned_cols=69  Identities=19%  Similarity=0.218  Sum_probs=59.6

Q ss_pred             CCCcccccCCCCcceeccccccccCChhHHHHHHHhhcCCCCCCCCCCCCCCCCCCccCCCCChhhhccccccCCCCCCC
Q 044013           12 SSSDDETDAGTGRSYECVFCKRGFTTAQALGGHMNIHRKDRAKNRPPSSSSISDKLTFFPSPSTWDDHQRSVHTNNNNHS   91 (153)
Q Consensus        12 ~~~h~~~~~~gekp~~C~~Cgk~F~~~~~L~~H~r~H~gekp~~C~~c~~~~Cgk~~~F~~~~~L~~H~~~~Ht~~kp~~   91 (153)
                      |..|++.+   ++||.|.+|++.|.....|..|++ |++++||.|..|++.       |.....|..|++.+|++++||.
T Consensus        32 l~~H~~~H---~~~~~C~~C~~~f~~~~~l~~H~~-H~~~~~~~C~~C~~~-------f~~~~~L~~H~~~~H~~~~~~~  100 (107)
T 1wjp_A           32 QGSHERLC---RNAAVCPYCSLRFFSPELKQEHES-KCEYKKLTCLECMRT-------FKSSFSIWRHQVEVHNQNNMAP  100 (107)
T ss_dssp             HHHHHHHH---HHSBCCTTTCCCBSSHHHHHHHHH-HCSTGGGEEGGGTEE-------CSSHHHHHHHHHHTSCCCCCCC
T ss_pred             HHHHHHHC---CCCccCCCCCCccCCHHHHHHHHH-cCCCCCccCccccch-------hCCHHHHHHHHHHHcCCCCCCC
Confidence            44555554   479999999999999999999996 999999999955555       9999999999955899999994

>2epx_A Zinc finger protein 28 homolog; C2H2, zinc finger domain, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.35  E-value=6.9e-13  Score=75.95  Aligned_cols=45  Identities=22%  Similarity=0.527  Sum_probs=40.6

Q ss_pred             CcccccCCCCcceeccccccccCChhHHHHHHH-hhcCCCCCCCCCC
Q 044013           14 SDDETDAGTGRSYECVFCKRGFTTAQALGGHMN-IHRKDRAKNRPPS   59 (153)
Q Consensus        14 ~h~~~~~~gekp~~C~~Cgk~F~~~~~L~~H~r-~H~gekp~~C~~c   59 (153)
                      +|++.+++ ++||.|.+|++.|.....|..|++ +|++++||.|+.|
T Consensus         2 ~H~~~H~~-~k~~~C~~C~k~F~~~~~L~~H~~~~H~~~k~~~C~~C   47 (47)
T 2epx_A            2 SSGSSGTG-KKPYECIECGKAFIQNTSLIRHWRYYHTGEKPSGPSSG   47 (47)
T ss_dssp             CCCCCCCC-CCSBCCSSSCCCBSSHHHHHHHHTTTTTTSCSSSCCCC
T ss_pred             ccccccCC-CCCEECCccCchhCChHHHHHHhHhhcCCCCCCCCCCC
Confidence            56777765 899999999999999999999999 9999999999865

>2wbs_A Krueppel-like factor 4; transcription-DNA complex, DNA-binding, transcription, metal-binding, DNA, protein, nucleus, activator; 1.70A {Mus musculus} PDB: 2wbu_A

Probab=99.35  E-value=1e-13  Score=89.48  Aligned_cols=65  Identities=20%  Similarity=0.315  Sum_probs=56.8

Q ss_pred             CCCcccccCCCCcceecc--ccccccCChhHHHHHHHhhcCCCCCCCCCCCCCCCCCCccCCCCChhhhccccccC
Q 044013           12 SSSDDETDAGTGRSYECV--FCKRGFTTAQALGGHMNIHRKDRAKNRPPSSSSISDKLTFFPSPSTWDDHQRSVHT   85 (153)
Q Consensus        12 ~~~h~~~~~~gekp~~C~--~Cgk~F~~~~~L~~H~r~H~gekp~~C~~c~~~~Cgk~~~F~~~~~L~~H~~~~Ht   85 (153)
                      |..|++.+.+ ++||.|.  .|++.|.....|..|+++|++++||.|+.|++.       |.....|..|++ +|+
T Consensus        23 l~~H~~~h~~-~~~~~C~~~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~C~~~-------f~~~~~l~~H~~-~H~   89 (89)
T 2wbs_A           23 LKAHLRTHTG-EKPYHCDWDGCGWKFARSDELTRHYRKHTGHRPFQCQKCDRA-------FSRSDHLALHMK-RHF   89 (89)
T ss_dssp             HHHHHTTSCS-SCCEECCSTTTCCEESSHHHHHHHHHHHHCCCCEECSSSSCE-------ESSHHHHHHHGG-GGC
T ss_pred             HHHHHHhcCC-CCCcCCCCCCCCCccCCHHHHHHHHHHcCCCCCccCCCCCcc-------cCCHHHHHHHHH-hhC
Confidence            5567776655 8899997  599999999999999999999999999966555       999999999999 874

>2em4_A Zinc finger protein 28 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=99.35  E-value=9.3e-13  Score=75.31  Aligned_cols=44  Identities=27%  Similarity=0.555  Sum_probs=40.1

Q ss_pred             CcccccCCCCcceeccccccccCChhHHHHHHHhhcCCCCCCCCC
Q 044013           14 SDDETDAGTGRSYECVFCKRGFTTAQALGGHMNIHRKDRAKNRPP   58 (153)
Q Consensus        14 ~h~~~~~~gekp~~C~~Cgk~F~~~~~L~~H~r~H~gekp~~C~~   58 (153)
                      +|++.+++ ++||.|.+|++.|.....|..|+++|++++||.|+.
T Consensus         2 ~H~~~H~~-~k~~~C~~C~k~f~~~~~L~~H~~~H~~~k~~~C~~   45 (46)
T 2em4_A            2 SSGSSGTG-QRPYECIECGKAFKTKSSLICHRRSHTGEKPSGPSS   45 (46)
T ss_dssp             CSCCCCCC-SSSEECSSSCCEESSHHHHHHHHHHHSSSSCCCCCC
T ss_pred             CCccccCC-CcCcCCCCCCCccCCHHHHHHHHHhcCCCCCCCCCC
Confidence            57777766 899999999999999999999999999999999973

>2emj_A Zinc finger protein 28 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 PDB: 2eoi_A

Probab=99.33  E-value=1.2e-12  Score=74.83  Aligned_cols=44  Identities=23%  Similarity=0.580  Sum_probs=39.8

Q ss_pred             CcccccCCCCcceeccccccccCChhHHHHHHHhhcCCCCCCCCC
Q 044013           14 SDDETDAGTGRSYECVFCKRGFTTAQALGGHMNIHRKDRAKNRPP   58 (153)
Q Consensus        14 ~h~~~~~~gekp~~C~~Cgk~F~~~~~L~~H~r~H~gekp~~C~~   58 (153)
                      .|++.+++ ++||.|.+|++.|.....|..|+++|++++||.|+.
T Consensus         2 ~H~~~H~~-~k~~~C~~C~k~F~~~~~L~~H~~~H~~~k~~~C~~   45 (46)
T 2emj_A            2 SSGSSGTG-EKPFECAECGKSFSISSQLATHQRIHTGEKPSGPSS   45 (46)
T ss_dssp             CCCCCCCC-CCSEECSSSSCEESSHHHHHHHHHHHTTSCSSSSCC
T ss_pred             CCCCCCCC-CCCEECCCCCcccCCHHHHHHHHHHhCCCCCCCCCC
Confidence            57777766 899999999999999999999999999999999973

>2epa_A Krueppel-like factor 10; transforming growth factor-beta-inducible early growth response protein 1, TGFB-inducible early growth response protein 1; NMR {Homo sapiens}

Probab=99.33  E-value=7.7e-13  Score=82.49  Aligned_cols=59  Identities=20%  Similarity=0.363  Sum_probs=51.9

Q ss_pred             ccCCCCcceeccc--cccccCChhHHHHHHHhhcCCCCCCCCC--CCCCCCCCCccCCCCChhhhcccccc
Q 044013           18 TDAGTGRSYECVF--CKRGFTTAQALGGHMNIHRKDRAKNRPP--SSSSISDKLTFFPSPSTWDDHQRSVH   84 (153)
Q Consensus        18 ~~~~gekp~~C~~--Cgk~F~~~~~L~~H~r~H~gekp~~C~~--c~~~~Cgk~~~F~~~~~L~~H~~~~H   84 (153)
                      ......++|.|.+  |++.|.....|..|+++|++++||.|.+  |++.       |.....|..|++ +|
T Consensus        10 ~~~~~~~~~~C~~~~C~k~f~~~~~L~~H~~~H~~~~~~~C~~~~C~k~-------f~~~~~l~~H~~-~H   72 (72)
T 2epa_A           10 IDSSRIRSHICSHPGCGKTYFKSSHLKAHTRTHTGEKPFSCSWKGCERR-------FARSDELSRHRR-TH   72 (72)
T ss_dssp             CCCCCCCCEECSSTTTCCEESSHHHHHHHHHHHSSSCSEECCCTTCCCE-------ESSHHHHHHHTT-TC
T ss_pred             CCccccCceeCCCCCCccccCCHHHHHHHHHhcCCCCCccCCCCCCCcc-------cCCHHHHHhHhh-cC
Confidence            3444578999998  9999999999999999999999999964  6665       999999999998 65

>2emg_A Zinc finger protein 484; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.33  E-value=1.2e-12  Score=74.78  Aligned_cols=44  Identities=25%  Similarity=0.430  Sum_probs=38.5

Q ss_pred             CcccccCCCCcceeccccccccCChhHHHHHHHhhcCCCCCCCCC
Q 044013           14 SDDETDAGTGRSYECVFCKRGFTTAQALGGHMNIHRKDRAKNRPP   58 (153)
Q Consensus        14 ~h~~~~~~gekp~~C~~Cgk~F~~~~~L~~H~r~H~gekp~~C~~   58 (153)
                      +|++.+++ ++||.|.+|++.|.....|..|+++|++++||.|++
T Consensus         2 ~H~~~H~~-~k~~~C~~C~k~f~~~~~L~~H~~~H~~~~~~~C~~   45 (46)
T 2emg_A            2 SSGSSGTG-ENPFICSECGKVFTHKTNLIIHQKIHTGERPSGPSS   45 (46)
T ss_dssp             CCCCCCCS-CCSCBCTTTCCBCSSHHHHHHHHTTTSCCCCSCSCC
T ss_pred             CCCCCCCC-CCCEECCccCcccCCHHHHHHHHHHhCCCCCCCCCC
Confidence            57777765 889999999999999999999999999999999873

>2eow_A Zinc finger protein 347; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.33  E-value=1.5e-12  Score=74.30  Aligned_cols=44  Identities=20%  Similarity=0.494  Sum_probs=39.6

Q ss_pred             CcccccCCCCcceeccccccccCChhHHHHHHHhhcCCCCCCCCC
Q 044013           14 SDDETDAGTGRSYECVFCKRGFTTAQALGGHMNIHRKDRAKNRPP   58 (153)
Q Consensus        14 ~h~~~~~~gekp~~C~~Cgk~F~~~~~L~~H~r~H~gekp~~C~~   58 (153)
                      .|++.+++ ++||.|.+|++.|.....|..|+++|++++||.|+.
T Consensus         2 ~H~~~H~~-~k~~~C~~C~k~f~~~~~L~~H~~~H~~~k~~~C~~   45 (46)
T 2eow_A            2 SSGSSGTG-EKPYKCNECGKAFRARSSLAIHQATHSGEKPSGPSS   45 (46)
T ss_dssp             CCCCCSCC-CCCEECTTSCCEESSHHHHHHHHHHHCCCSCSCTTC
T ss_pred             CccCCCCC-CCCeeccccCChhcCHHHHHHHHHHcCCCCCCCCCC
Confidence            57777665 899999999999999999999999999999999973

>2enf_A Zinc finger protein 347; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.33  E-value=1.2e-12  Score=74.73  Aligned_cols=44  Identities=25%  Similarity=0.502  Sum_probs=38.5

Q ss_pred             CcccccCCCCcceeccccccccCChhHHHHHHHhhcCCCCCCCCC
Q 044013           14 SDDETDAGTGRSYECVFCKRGFTTAQALGGHMNIHRKDRAKNRPP   58 (153)
Q Consensus        14 ~h~~~~~~gekp~~C~~Cgk~F~~~~~L~~H~r~H~gekp~~C~~   58 (153)
                      .|++.+++ ++||.|.+|++.|.....|..|+++|++++||.|++
T Consensus         2 ~H~~~H~~-~k~~~C~~C~k~F~~~~~L~~H~~~H~~~k~~~C~~   45 (46)
T 2enf_A            2 SSGSSGTG-EKPYKCNECGKVFTQNSHLVRHRGIHTGEKPSGPSS   45 (46)
T ss_dssp             CCCCCCCC-CCSCBCSSSCCBCSSHHHHHHHHTTTTTSSCCCCSC
T ss_pred             CCCcCCCC-CcCeECCCCCcccCCHHHHHHHHHhhCCCCCCCCCC
Confidence            56677665 889999999999999999999999999999999873

>2eq2_A Zinc finger protein 347; C2H2, zinc finger domain, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.33  E-value=1.3e-12  Score=74.56  Aligned_cols=43  Identities=23%  Similarity=0.630  Sum_probs=37.2

Q ss_pred             CcccccCCCCcceeccccccccCChhHHHHHHHhhcCCCCCCCC
Q 044013           14 SDDETDAGTGRSYECVFCKRGFTTAQALGGHMNIHRKDRAKNRP   57 (153)
Q Consensus        14 ~h~~~~~~gekp~~C~~Cgk~F~~~~~L~~H~r~H~gekp~~C~   57 (153)
                      .|++.+++ ++||.|.+|++.|.....|..|+++|++++||.|+
T Consensus         2 ~H~~~H~~-~k~~~C~~C~k~f~~~~~L~~H~~~H~~~k~~~C~   44 (46)
T 2eq2_A            2 SSGSSGTG-GKPYQCNECGKAFSQTSKLARHQRVHTGEKPSGPS   44 (46)
T ss_dssp             CCCCSSSS-SCSSSCCSSCCCCSSHHHHHHHGGGGCCCCCCCCC
T ss_pred             CcccccCC-CCCeECCCCCcccCCHHHHHHHHHHcCCCCCCCCC
Confidence            56676665 88999999999999999999999999999999886

>2emi_A Zinc finger protein 484; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.33  E-value=1.6e-12  Score=74.19  Aligned_cols=43  Identities=30%  Similarity=0.616  Sum_probs=39.3

Q ss_pred             CcccccCCCCcceeccccccccCChhHHHHHHHhhcCCCCCCCC
Q 044013           14 SDDETDAGTGRSYECVFCKRGFTTAQALGGHMNIHRKDRAKNRP   57 (153)
Q Consensus        14 ~h~~~~~~gekp~~C~~Cgk~F~~~~~L~~H~r~H~gekp~~C~   57 (153)
                      +|++.+++ ++||.|.+|++.|.....|..|+++|++++||.|+
T Consensus         2 ~H~~~H~~-~~~~~C~~C~k~F~~~~~L~~H~~~H~~~k~~~C~   44 (46)
T 2emi_A            2 SSGSSGTG-ERHYECSECGKAFIQKSTLSMHQRIHRGEKPSGPS   44 (46)
T ss_dssp             CCCCSCSS-CCCEECSSSCCEESSHHHHHHHHGGGCSCCCCSCC
T ss_pred             CCCcccCC-CCCCCCCCCCcccCCHHHHHHHHhHhCCCCCCCCC
Confidence            57777766 89999999999999999999999999999999997

>2en9_A Zinc finger protein 28 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.33  E-value=1.5e-12  Score=74.40  Aligned_cols=44  Identities=27%  Similarity=0.551  Sum_probs=39.3

Q ss_pred             CcccccCCCCcceeccccccccCChhHHHHHHHhhcCCCCCCCCC
Q 044013           14 SDDETDAGTGRSYECVFCKRGFTTAQALGGHMNIHRKDRAKNRPP   58 (153)
Q Consensus        14 ~h~~~~~~gekp~~C~~Cgk~F~~~~~L~~H~r~H~gekp~~C~~   58 (153)
                      +|++.+++ ++||.|.+|++.|.....|..|+++|++++||.|++
T Consensus         2 ~h~~~H~~-~k~~~C~~C~k~F~~~~~L~~H~~~H~~~k~~~C~~   45 (46)
T 2en9_A            2 SSGSSGAG-KKLFKCNECKKTFTQSSSLTVHQRIHTGEKPSGPSS   45 (46)
T ss_dssp             CCCSSCCS-SCCCBCTTTCCBCSSHHHHHHHHHHHTSSCCCSCCC
T ss_pred             CCCCCCCC-CCCEECCccCcccCCHHHHHHHHHHcCCCCCCCCCC
Confidence            56777665 899999999999999999999999999999999973

>2ytp_A Zinc finger protein 484; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.33  E-value=1.3e-12  Score=74.65  Aligned_cols=43  Identities=28%  Similarity=0.548  Sum_probs=39.1

Q ss_pred             CcccccCCCCcceeccccccccCChhHHHHHHHhhcCCCCCCCC
Q 044013           14 SDDETDAGTGRSYECVFCKRGFTTAQALGGHMNIHRKDRAKNRP   57 (153)
Q Consensus        14 ~h~~~~~~gekp~~C~~Cgk~F~~~~~L~~H~r~H~gekp~~C~   57 (153)
                      +|++.+++ ++||.|.+|++.|.....|..|+++|++++||.|+
T Consensus         2 ~H~~~H~~-~k~~~C~~C~k~F~~~~~L~~H~~~H~~~k~~~C~   44 (46)
T 2ytp_A            2 SSGSSGTG-ERHYECSECGKAFARKSTLIMHQRIHTGEKPSGPS   44 (46)
T ss_dssp             CCCCSSCC-CCCEECSSSCCEESSHHHHHHHHTTTSCCCCCSSC
T ss_pred             CcccCcCC-CCCeECCcCCcccCCHHHHHHHHHHhCCCCCCCCC
Confidence            57777765 89999999999999999999999999999999997

>2eor_A Zinc finger protein 224; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.32  E-value=1.4e-12  Score=74.40  Aligned_cols=44  Identities=23%  Similarity=0.533  Sum_probs=39.8

Q ss_pred             CcccccCCCCcceeccccccccCChhHHHHHHHhhcCCCCCCCCC
Q 044013           14 SDDETDAGTGRSYECVFCKRGFTTAQALGGHMNIHRKDRAKNRPP   58 (153)
Q Consensus        14 ~h~~~~~~gekp~~C~~Cgk~F~~~~~L~~H~r~H~gekp~~C~~   58 (153)
                      +|++.+++ ++||.|.+|++.|.....|..|+++|++++||.|++
T Consensus         2 ~H~~~H~~-~~~~~C~~C~k~f~~~~~L~~H~~~H~~~kp~~C~~   45 (46)
T 2eor_A            2 SSGSSGTG-EKPYNCEECGKAFIHDSQLQEHQRIHTGEKPSGPSS   45 (46)
T ss_dssp             CSSSSSSC-CCSEECTTTCCEESSHHHHHHHHHHHHSCCCSSSTT
T ss_pred             CCCcCcCC-CcCccCCCCCCCcCCHHHHHHHHHhcCCCCCCCCCC
Confidence            57777765 899999999999999999999999999999999973

>2ep0_A Zinc finger protein 28 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.32  E-value=1.5e-12  Score=74.40  Aligned_cols=44  Identities=20%  Similarity=0.543  Sum_probs=38.8

Q ss_pred             cccccCCCCcceeccccccccCChhHHHHHHHhhcCCCCCCCCCC
Q 044013           15 DDETDAGTGRSYECVFCKRGFTTAQALGGHMNIHRKDRAKNRPPS   59 (153)
Q Consensus        15 h~~~~~~gekp~~C~~Cgk~F~~~~~L~~H~r~H~gekp~~C~~c   59 (153)
                      +++.+++ ++||.|.+|++.|.....|..|+++|++++||.|..|
T Consensus         3 ~~~~h~~-~~~~~C~~C~k~f~~~~~L~~H~~~H~~~k~~~C~~C   46 (46)
T 2ep0_A            3 SGSSGTG-EKPYKCDVCHKSFRYGSSLTVHQRIHTGEKPSGPSSG   46 (46)
T ss_dssp             CCCSSTT-CCSEECSSSCCEESSHHHHHHHHTTTSSSCCCSCCCC
T ss_pred             CCCCCCC-CCCeeCcccCcccCChHHHHHHHHHhCCCCCCCCCCC
Confidence            3445554 8999999999999999999999999999999999865

>2eoz_A Zinc finger protein 473; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.32  E-value=1.6e-12  Score=74.31  Aligned_cols=43  Identities=21%  Similarity=0.583  Sum_probs=39.6

Q ss_pred             CcccccCCCCcceeccccccccCChhHHHHHHHhhcCCCCCCCC
Q 044013           14 SDDETDAGTGRSYECVFCKRGFTTAQALGGHMNIHRKDRAKNRP   57 (153)
Q Consensus        14 ~h~~~~~~gekp~~C~~Cgk~F~~~~~L~~H~r~H~gekp~~C~   57 (153)
                      +|++.+++ ++||.|.+|++.|.....|..|+++|++++||.|+
T Consensus         2 ~H~~~H~~-~k~~~C~~C~k~f~~~~~L~~H~~~H~~~~~~~C~   44 (46)
T 2eoz_A            2 SSGSSGTG-EKPYSCNVCGKAFVLSAHLNQHLRVHTQETLSGPS   44 (46)
T ss_dssp             CSCCCCSS-CCSEEETTTTEEESSHHHHHHHHHHHSSCCSSSCC
T ss_pred             CccccCCC-CCCeECcccChhhCCHHHHHHHHHHhCCCCCCCCC
Confidence            57777765 89999999999999999999999999999999997

>2em3_A Zinc finger protein 28 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.32  E-value=1.8e-12  Score=74.02  Aligned_cols=44  Identities=25%  Similarity=0.590  Sum_probs=39.7

Q ss_pred             CcccccCCCCcceeccccccccCChhHHHHHHHhhcCCCCCCCCC
Q 044013           14 SDDETDAGTGRSYECVFCKRGFTTAQALGGHMNIHRKDRAKNRPP   58 (153)
Q Consensus        14 ~h~~~~~~gekp~~C~~Cgk~F~~~~~L~~H~r~H~gekp~~C~~   58 (153)
                      +|++.+++ ++||.|.+|++.|.....|..|+++|++++||.|+.
T Consensus         2 ~H~~~H~~-~~~~~C~~C~k~F~~~~~L~~H~~~H~~~~~~~C~~   45 (46)
T 2em3_A            2 SSGSSGTG-EKPYECKVCSKAFTQKAHLAQHQKTHTGEKPSGPSS   45 (46)
T ss_dssp             CCCCCCSS-CCSEECSSSCCEESSHHHHHHHHHHHCCCCCCCSCC
T ss_pred             CCCCCCCC-CcCeECCCCCcccCCHHHHHHHHHHhCCCCCCCCCC
Confidence            57777665 899999999999999999999999999999999973

>2eps_A POZ-, at HOOK-, and zinc finger-containing protein 1; C2H2, zinc finger domain, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: g.37.1.1

Probab=99.32  E-value=2e-12  Score=76.67  Aligned_cols=42  Identities=29%  Similarity=0.661  Sum_probs=38.1

Q ss_pred             CCCcceeccccccccCChhHHHHHHH-hhcCCCCCCCCCCCCC
Q 044013           21 GTGRSYECVFCKRGFTTAQALGGHMN-IHRKDRAKNRPPSSSS   62 (153)
Q Consensus        21 ~gekp~~C~~Cgk~F~~~~~L~~H~r-~H~gekp~~C~~c~~~   62 (153)
                      .+++||.|.+|++.|.....|..|++ +|++++||.|..|++.
T Consensus         8 ~~~k~~~C~~C~k~f~~~~~L~~H~~~~H~~~k~~~C~~C~k~   50 (54)
T 2eps_A            8 SVGKPYICQSCGKGFSRPDHLNGHIKQVHTSERPHKCQVWVSG   50 (54)
T ss_dssp             CSSCCEECSSSCCEESSHHHHHHHHHHTSCCCCCCCSSSSCCS
T ss_pred             CCCCCeECCCCCcccCCHHHHHHHHHHhcCCCCCccCCCCCCC
Confidence            45899999999999999999999997 9999999999966665

>2ytf_A Zinc finger protein 268; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.32  E-value=1.7e-12  Score=74.06  Aligned_cols=44  Identities=23%  Similarity=0.507  Sum_probs=39.3

Q ss_pred             CcccccCCCCcceeccccccccCChhHHHHHHHhhcCCCCCCCCC
Q 044013           14 SDDETDAGTGRSYECVFCKRGFTTAQALGGHMNIHRKDRAKNRPP   58 (153)
Q Consensus        14 ~h~~~~~~gekp~~C~~Cgk~F~~~~~L~~H~r~H~gekp~~C~~   58 (153)
                      .|++.+++ ++||.|.+|++.|.....|..|+++|++++||.|+.
T Consensus         2 ~H~~~H~~-~k~~~C~~C~k~f~~~~~L~~H~~~H~~~k~~~C~~   45 (46)
T 2ytf_A            2 SSGSSGTG-EKPFECSECQKAFNTKSNLIVHQRTHTGEKPSGPSS   45 (46)
T ss_dssp             CCCCSSCC-CCSEECSSSCCEESSHHHHHHHHHTSCSSSSSCCCC
T ss_pred             CCCCCCCC-CCCcCCCCCCcccCCHHHHHHHHHHhCCCCCCCCCC
Confidence            56777665 899999999999999999999999999999999973

>2eoh_A Zinc finger protein 28 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.32  E-value=1.6e-12  Score=74.30  Aligned_cols=43  Identities=26%  Similarity=0.588  Sum_probs=37.9

Q ss_pred             CcccccCCCCcceeccccccccCChhHHHHHHHhhcCCCCCCCC
Q 044013           14 SDDETDAGTGRSYECVFCKRGFTTAQALGGHMNIHRKDRAKNRP   57 (153)
Q Consensus        14 ~h~~~~~~gekp~~C~~Cgk~F~~~~~L~~H~r~H~gekp~~C~   57 (153)
                      +|++.+++ ++||.|.+|++.|.....|..|+++|++++||.|+
T Consensus         2 ~H~~~H~~-~k~~~C~~C~k~f~~~~~L~~H~~~H~~~k~~~C~   44 (46)
T 2eoh_A            2 SSGSSGSG-KKPYECKECRKTFIQIGHLNQHKRVHTGERSSGPS   44 (46)
T ss_dssp             CCCCSCCC-SCSCCCSSSCCCCSSHHHHHHHHHHCSSCCSCSTT
T ss_pred             CCCCCcCC-CCCcCCCCcCchhCCHHHHHHHHHHhCCCCCCCCC
Confidence            56677665 88999999999999999999999999999999986

>2yts_A Zinc finger protein 484; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.32  E-value=1.7e-12  Score=73.96  Aligned_cols=44  Identities=23%  Similarity=0.503  Sum_probs=39.1

Q ss_pred             CcccccCCCCcceeccccccccCChhHHHHHHHhhcCCCCCCCCC
Q 044013           14 SDDETDAGTGRSYECVFCKRGFTTAQALGGHMNIHRKDRAKNRPP   58 (153)
Q Consensus        14 ~h~~~~~~gekp~~C~~Cgk~F~~~~~L~~H~r~H~gekp~~C~~   58 (153)
                      .|++.+++ ++||.|.+|++.|.....|..|+++|++++||.|+.
T Consensus         2 ~H~~~H~~-~k~~~C~~C~k~f~~~~~L~~H~~~H~~~~p~~C~~   45 (46)
T 2yts_A            2 SSGSSGTG-EKPYICNECGKSFIQKSHLNRHRRIHTGEKPSGPSS   45 (46)
T ss_dssp             CCSCCCCS-CCSEECSSSCCEESSHHHHHHHGGGTSSCCSSCCCC
T ss_pred             CCCCCCCC-CcCEECCCCChhhCChHHHHHHHHhcCCCCCcCCCC
Confidence            56777665 889999999999999999999999999999999973

>2epr_A POZ-, at HOOK-, and zinc finger-containing protein 1; C2H2, zinc finger domain, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: g.37.1.1

Probab=99.32  E-value=1.6e-12  Score=75.12  Aligned_cols=41  Identities=24%  Similarity=0.399  Sum_probs=37.7

Q ss_pred             CCCcceeccccccccCChhHHHHHHHhhcCCCCCCCCCCCC
Q 044013           21 GTGRSYECVFCKRGFTTAQALGGHMNIHRKDRAKNRPPSSS   61 (153)
Q Consensus        21 ~gekp~~C~~Cgk~F~~~~~L~~H~r~H~gekp~~C~~c~~   61 (153)
                      .+++||.|.+|++.|.....|..|+++|++++||.|..|++
T Consensus         8 ~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~k~~~C~~C~k   48 (48)
T 2epr_A            8 RTRKQVACEICGKIFRDVYHLNRHKLSHSGEKPYSSGPSSG   48 (48)
T ss_dssp             CCCCSEEETTTTEEESSHHHHHHHGGGSCSCCCCCSCCCCC
T ss_pred             CCCcCeeCCCCCcccCCHHHHHHHHHhcCCCCCccCCCCCC
Confidence            35789999999999999999999999999999999996654

>2ep1_A Zinc finger protein 484; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.31  E-value=1.8e-12  Score=73.88  Aligned_cols=43  Identities=26%  Similarity=0.526  Sum_probs=37.6

Q ss_pred             CcccccCCCCcceeccccccccCChhHHHHHHHhhcCCCCCCCC
Q 044013           14 SDDETDAGTGRSYECVFCKRGFTTAQALGGHMNIHRKDRAKNRP   57 (153)
Q Consensus        14 ~h~~~~~~gekp~~C~~Cgk~F~~~~~L~~H~r~H~gekp~~C~   57 (153)
                      .|++.+++ ++||.|.+|++.|.....|..|+++|++++||.|+
T Consensus         2 ~H~~~H~~-~k~~~C~~C~k~f~~~~~L~~H~~~H~~~k~~~C~   44 (46)
T 2ep1_A            2 SSGSSGTG-EKPYECSDCGKSFIKKSQLHVHQRIHTGENPSGPS   44 (46)
T ss_dssp             CCCCCCSS-CCSSCCSSSCCCCSSHHHHHHHHGGGSSSCCCSSS
T ss_pred             ccccCCCC-CCCcCCCCCCchhCCHHHHHHHHHHhCCCCCCCCC
Confidence            56677665 88999999999999999999999999999999986

>2wbt_A B-129; zinc finger; 2.70A {Sulfolobus virus 1}

Probab=99.31  E-value=5.1e-13  Score=92.24  Aligned_cols=67  Identities=10%  Similarity=0.061  Sum_probs=33.4

Q ss_pred             cceeccccccccC------ChhHHHHHHHhhcCCCCCCCCCCCCCCCCCCccCCCCChhhhccccccCCCCCCCCCCCCc
Q 044013           24 RSYECVFCKRGFT------TAQALGGHMNIHRKDRAKNRPPSSSSISDKLTFFPSPSTWDDHQRSVHTNNNNHSNYDSYG   97 (153)
Q Consensus        24 kp~~C~~Cgk~F~------~~~~L~~H~r~H~gekp~~C~~c~~~~Cgk~~~F~~~~~L~~H~~~~Ht~~kp~~~~~~~~   97 (153)
                      +++.|++|.+.|.      ....|..|+ .|++++||.|+.|++.       |.....|..|++ +|  ++|| .|..|+
T Consensus        40 ~~~~c~~~~~~~~~~~~~~~~~~l~~h~-~h~~~~~~~C~~C~k~-------f~~~~~l~~H~~-~H--~~~~-~C~~C~  107 (129)
T 2wbt_A           40 KRLIRAIVKTLIHNPQLLDESSYLYRLL-ASKAISQFVCPLCLMP-------FSSSVSLKQHIR-YT--EHTK-VCPVCK  107 (129)
T ss_dssp             HHHHHHHHHHHHHCGGGTTTHHHHHHHH-HHHHHCSEECTTTCCE-------ESSHHHHHHHHH-HT--CCCC-BCTTTC
T ss_pred             CcccchhhhcccCCCcccCCHHHHHHHH-HhCCCCCeECCCCCcc-------cCCHhHHHHHHH-HC--CCCC-CCCCCC
Confidence            4455555544443      333344444 3555555555533333       555555555555 55  5555 455555


Q ss_pred             ccccc
Q 044013           98 QNYHQ  102 (153)
Q Consensus        98 ~~f~~  102 (153)
                      +.|.+
T Consensus       108 k~f~~  112 (129)
T 2wbt_A          108 KEFTS  112 (129)
T ss_dssp             CBCSS
T ss_pred             cccCC
Confidence            55543

>2eoj_A Zinc finger protein 268; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.31  E-value=1.5e-12  Score=73.52  Aligned_cols=43  Identities=23%  Similarity=0.465  Sum_probs=38.5

Q ss_pred             CcccccCCCCcceeccccccccCChhHHHHHHHhhcCCCCCCCC
Q 044013           14 SDDETDAGTGRSYECVFCKRGFTTAQALGGHMNIHRKDRAKNRP   57 (153)
Q Consensus        14 ~h~~~~~~gekp~~C~~Cgk~F~~~~~L~~H~r~H~gekp~~C~   57 (153)
                      +|++.+++ ++||.|.+|++.|.....|..|+++|++++||.|+
T Consensus         2 ~H~~~H~~-~k~~~C~~C~k~f~~~~~L~~H~~~H~~~~~~~C~   44 (44)
T 2eoj_A            2 SSGSSGTG-ENPYECCECGKVFSRKDQLVSHQKTHSGQSGPSSG   44 (44)
T ss_dssp             CSCCSSSS-CCSCEETTTTEECSSHHHHHHHHTTSSSSCSCCCC
T ss_pred             CCccccCC-CcCeeCCCCCCccCCHHHHHHHHHHcCCCCCCCCC
Confidence            57777766 88999999999999999999999999999999884

>2yti_A Zinc finger protein 347; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.31  E-value=1.5e-12  Score=74.32  Aligned_cols=44  Identities=25%  Similarity=0.530  Sum_probs=37.2

Q ss_pred             CcccccCCCCcceeccccccccCChhHHHHHHHhhcCCCCCCCCC
Q 044013           14 SDDETDAGTGRSYECVFCKRGFTTAQALGGHMNIHRKDRAKNRPP   58 (153)
Q Consensus        14 ~h~~~~~~gekp~~C~~Cgk~F~~~~~L~~H~r~H~gekp~~C~~   58 (153)
                      .|++.+++ ++||.|.+|++.|.....|..|+++|++++||.|++
T Consensus         2 ~H~~~H~~-~k~~~C~~C~k~F~~~~~L~~H~~~H~~~k~~~C~~   45 (46)
T 2yti_A            2 SSGSSGTG-EKPYKCNECGKVFTQNSHLARHRGIHTGEKPSGPSS   45 (46)
T ss_dssp             CCCCCCSC-CCTTCCSSSCCCCSSHHHHHHHHTTTSCSCCSSTTC
T ss_pred             CCCcCCCC-CcCeECCCCCcccCChhHHHHHhHhcCCCCCCCCCC
Confidence            46666665 889999999999999999999999999999998863

>2em6_A Zinc finger protein 224; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.31  E-value=1.9e-12  Score=73.98  Aligned_cols=43  Identities=21%  Similarity=0.560  Sum_probs=37.8

Q ss_pred             CcccccCCCCcceeccccccccCChhHHHHHHHhhcCCCCCCCC
Q 044013           14 SDDETDAGTGRSYECVFCKRGFTTAQALGGHMNIHRKDRAKNRP   57 (153)
Q Consensus        14 ~h~~~~~~gekp~~C~~Cgk~F~~~~~L~~H~r~H~gekp~~C~   57 (153)
                      .|++.+++ ++||.|.+|++.|.....|..|+++|++++||.|+
T Consensus         2 ~H~~~H~~-~k~~~C~~C~k~f~~~~~L~~H~~~H~~~k~~~C~   44 (46)
T 2em6_A            2 SSGSSGMG-EKCYKCDVCGKEFSQSSHLQTHQRVHTGEKPSGPS   44 (46)
T ss_dssp             CCCSCCCC-CCCCBCSSSCCBCSSHHHHHHHHTTTSSSCCCCTT
T ss_pred             CCccccCC-CCCeECCCCCcccCCHHHHHHHHHHcCCCCCCCCC
Confidence            46666665 88999999999999999999999999999999986

>2yth_A Zinc finger protein 224; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.31  E-value=2.1e-12  Score=73.77  Aligned_cols=43  Identities=21%  Similarity=0.540  Sum_probs=37.6

Q ss_pred             CcccccCCCCcceeccccccccCChhHHHHHHHhhcCCCCCCCC
Q 044013           14 SDDETDAGTGRSYECVFCKRGFTTAQALGGHMNIHRKDRAKNRP   57 (153)
Q Consensus        14 ~h~~~~~~gekp~~C~~Cgk~F~~~~~L~~H~r~H~gekp~~C~   57 (153)
                      .|++.+++ ++||.|.+|++.|.....|..|+++|++++||.|+
T Consensus         2 ~H~~~H~~-~k~~~C~~C~k~f~~~~~L~~H~~~H~~~k~~~C~   44 (46)
T 2yth_A            2 SSGSSGSG-EKPFQCEECGKRFTQNSHLHSHQRVHTGEKPSGPS   44 (46)
T ss_dssp             CCCSCCCC-SSSBCCSSSCCCBSSHHHHHHHGGGGTTCCCSSCC
T ss_pred             CcccCCCC-CcCCCCCCCCcccCCHHHHHHHHHhcCCCCCCCCC
Confidence            56676665 88999999999999999999999999999999886

>2en7_A Zinc finger protein 268; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.31  E-value=1.5e-12  Score=73.45  Aligned_cols=43  Identities=21%  Similarity=0.377  Sum_probs=36.0

Q ss_pred             CcccccCCCCcceeccccccccCChhHHHHHHHhhcCCCCCCCC
Q 044013           14 SDDETDAGTGRSYECVFCKRGFTTAQALGGHMNIHRKDRAKNRP   57 (153)
Q Consensus        14 ~h~~~~~~gekp~~C~~Cgk~F~~~~~L~~H~r~H~gekp~~C~   57 (153)
                      .|++.+++ ++||.|.+|++.|.....|..|+++|++++||.|+
T Consensus         2 ~H~~~H~~-~k~~~C~~C~k~f~~~~~L~~H~~~H~~~~~~~C~   44 (44)
T 2en7_A            2 SSGSSGTG-MKPYVCNECGKAFRSKSYLIIHTRTHTGESGPSSG   44 (44)
T ss_dssp             CSCCCSSS-SSSSCCTTTCCCCSSHHHHHHHHTTTCCSSSSCCC
T ss_pred             CCCcCCCC-CcCeECCCCCCccCCHHHHHHHhhhcCCCCCCCCC
Confidence            56666665 78899999999999999999999999999998874

>2eq1_A Zinc finger protein 347; C2H2, zinc finger domain, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.31  E-value=1.8e-12  Score=74.04  Aligned_cols=43  Identities=23%  Similarity=0.525  Sum_probs=37.3

Q ss_pred             CcccccCCCCcceeccccccccCChhHHHHHHHhhcCCCCCCCC
Q 044013           14 SDDETDAGTGRSYECVFCKRGFTTAQALGGHMNIHRKDRAKNRP   57 (153)
Q Consensus        14 ~h~~~~~~gekp~~C~~Cgk~F~~~~~L~~H~r~H~gekp~~C~   57 (153)
                      .|++.+++ ++||.|.+|++.|.....|..|+++|++++||.|+
T Consensus         2 ~H~~~H~~-~k~~~C~~C~k~f~~~~~L~~H~~~H~~~k~~~C~   44 (46)
T 2eq1_A            2 SSGSSGTG-EKPYKCNECGKAFRAHSNLTTHQVIHTGEKPSGPS   44 (46)
T ss_dssp             CCCCCCCC-SCCCCCTTTTCCCSSHHHHHHHHTTTCCSCCSSCC
T ss_pred             CcccccCC-CCCeECCcCChhhCCHHHHHHHHHHhCCCCCCCCC
Confidence            56776665 88999999999999999999999999999999886

>2el5_A Zinc finger protein 268; alternative splicing, DNA-binding, metal-binding, nuclear protein, repeat, transcription, transcription regulation; NMR {Homo sapiens} SCOP: k.12.1.1 PDB: 2eol_A 2emv_A 2eqw_A 2en0_A 2epy_A

Probab=99.31  E-value=2.1e-12  Score=72.21  Aligned_cols=42  Identities=21%  Similarity=0.457  Sum_probs=36.5

Q ss_pred             cccccCCCCcceeccccccccCChhHHHHHHHhhcCCCCCCCC
Q 044013           15 DDETDAGTGRSYECVFCKRGFTTAQALGGHMNIHRKDRAKNRP   57 (153)
Q Consensus        15 h~~~~~~gekp~~C~~Cgk~F~~~~~L~~H~r~H~gekp~~C~   57 (153)
                      |++.+++ ++||.|.+|++.|.....|..|+++|++++||.|+
T Consensus         1 H~~~H~~-~k~~~C~~C~k~f~~~~~L~~H~~~H~~~~~~~C~   42 (42)
T 2el5_A            1 GSSGSSG-ENPYECSECGKAFNRKDQLISHQRTHAGESGPSSG   42 (42)
T ss_dssp             CCSSSSS-CCSEECSSSCCEESSHHHHHHHHGGGCCCCSCCCC
T ss_pred             CCCCCCC-CCCccCCCcChhhCCHHHHHHHHHhcCCCCCCCCC
Confidence            4555554 88999999999999999999999999999999884

>2yrj_A Zinc finger protein 473; C2H2-type zinc finger, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.30  E-value=2.1e-12  Score=73.65  Aligned_cols=43  Identities=23%  Similarity=0.532  Sum_probs=38.9

Q ss_pred             CcccccCCCCcceeccccccccCChhHHHHHHHhhcCCCCCCCC
Q 044013           14 SDDETDAGTGRSYECVFCKRGFTTAQALGGHMNIHRKDRAKNRP   57 (153)
Q Consensus        14 ~h~~~~~~gekp~~C~~Cgk~F~~~~~L~~H~r~H~gekp~~C~   57 (153)
                      .|++.+++ ++||.|.+|++.|.....|..|+++|++++||.|+
T Consensus         2 ~H~~~H~~-~~~~~C~~C~k~f~~~~~L~~H~~~H~~~k~~~C~   44 (46)
T 2yrj_A            2 SSGSSGTG-EKPYRCGECGKAFAQKANLTQHQRIHTGEKPSGPS   44 (46)
T ss_dssp             CCCCCCCC-CCCEECSSSCCEESSHHHHHHHHTTTSSCCSSCSC
T ss_pred             CCccCCCC-CCCeECCCCCCccCCHHHHHHHHHHcCCCCCCCCC
Confidence            56777665 88999999999999999999999999999999997

>2yto_A Zinc finger protein 484; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.30  E-value=1.7e-12  Score=74.15  Aligned_cols=43  Identities=26%  Similarity=0.509  Sum_probs=39.1

Q ss_pred             CcccccCCCCcceeccccccccCChhHHHHHHHhhcCCCCCCCC
Q 044013           14 SDDETDAGTGRSYECVFCKRGFTTAQALGGHMNIHRKDRAKNRP   57 (153)
Q Consensus        14 ~h~~~~~~gekp~~C~~Cgk~F~~~~~L~~H~r~H~gekp~~C~   57 (153)
                      +|++.+++ ++||.|.+|++.|.....|..|+++|++++||.|+
T Consensus         2 ~H~~~H~~-~k~~~C~~C~k~f~~~~~L~~H~~~H~~~k~~~C~   44 (46)
T 2yto_A            2 SSGSSGTG-EKPYKCSDCGKAFTRKSGLHIHQQSHTGERHSGPS   44 (46)
T ss_dssp             CCCCCCCS-CCCEECSSSCCEESSHHHHHHHHHHHTCCCBTTTB
T ss_pred             CcccccCC-CCCEECcccCCccCCHhHHHHHHHHcCCCCCCCCC
Confidence            57777765 89999999999999999999999999999999986

>2eon_A ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.30  E-value=1.6e-12  Score=74.36  Aligned_cols=43  Identities=23%  Similarity=0.581  Sum_probs=37.3

Q ss_pred             CcccccCCCCcceeccccccccCChhHHHHHHHhhcCCCCCCCC
Q 044013           14 SDDETDAGTGRSYECVFCKRGFTTAQALGGHMNIHRKDRAKNRP   57 (153)
Q Consensus        14 ~h~~~~~~gekp~~C~~Cgk~F~~~~~L~~H~r~H~gekp~~C~   57 (153)
                      +|++++++ ++||.|.+|++.|.....|..|+++|++++||.|+
T Consensus         2 ~h~~~H~~-~k~~~C~~C~k~f~~~~~L~~H~~~H~~~k~~~C~   44 (46)
T 2eon_A            2 SSGSSGTG-EKPYKCQVCGKAFRVSSHLVQHHSVHSGERPSGPS   44 (46)
T ss_dssp             CCSSSCSS-CCSCBCSSSCCBCSSHHHHHHHTTTTTSCCSCTTS
T ss_pred             CCCCCCCC-CcccCCCCCCcccCcHHHHHHHHHhcCCCCCCCCC
Confidence            46666665 88999999999999999999999999999999986

>2enh_A Zinc finger protein 28 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.30  E-value=2.1e-12  Score=73.80  Aligned_cols=43  Identities=23%  Similarity=0.625  Sum_probs=37.2

Q ss_pred             CcccccCCCCcceeccccccccCChhHHHHHHHhhcCCCCCCCC
Q 044013           14 SDDETDAGTGRSYECVFCKRGFTTAQALGGHMNIHRKDRAKNRP   57 (153)
Q Consensus        14 ~h~~~~~~gekp~~C~~Cgk~F~~~~~L~~H~r~H~gekp~~C~   57 (153)
                      +|++.+++ ++||.|.+|++.|.....|..|+++|++++||.|+
T Consensus         2 ~h~~~h~~-~k~~~C~~C~k~F~~~~~L~~H~~~H~~~k~~~C~   44 (46)
T 2enh_A            2 SSGSSGTG-EKPYECDVCRKAFSHHASLTQHQRVHSGEKPSGPS   44 (46)
T ss_dssp             CCCCCCCC-SSSCBCTTTCCBCSSSHHHHHHGGGSCCSCCCCCC
T ss_pred             CCCCCcCC-CCCcCCCCcCchhCCHHHHHHHHHHhCCCCCCCCC
Confidence            46666665 88999999999999999999999999999999886

>2eof_A Zinc finger protein 268; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.30  E-value=2.6e-12  Score=72.46  Aligned_cols=43  Identities=26%  Similarity=0.502  Sum_probs=38.3

Q ss_pred             CcccccCCCCcceeccccccccCChhHHHHHHHhhcCCCCCCCC
Q 044013           14 SDDETDAGTGRSYECVFCKRGFTTAQALGGHMNIHRKDRAKNRP   57 (153)
Q Consensus        14 ~h~~~~~~gekp~~C~~Cgk~F~~~~~L~~H~r~H~gekp~~C~   57 (153)
                      .|++.+++ ++||.|.+|++.|.....|..|+++|++++||.|+
T Consensus         2 ~H~~~H~~-~k~~~C~~C~k~f~~~~~L~~H~~~H~~~~~~~C~   44 (44)
T 2eof_A            2 SSGSSGTG-EKPYECNECQKAFNTKSNLMVHQRTHTGESGPSSG   44 (44)
T ss_dssp             CCSSCCSC-CCSEECTTTCCEESCHHHHHHHHHHTTTSSCSCCC
T ss_pred             CCccCCCC-CCCeECCCCCcccCCHhHHHHHHHHhCCCCCCCCC
Confidence            46676665 88999999999999999999999999999999884

>2csh_A Zinc finger protein 297B; ZF-C2H2 domain, zinc finger and BTB domain containing protein 22B, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1

Probab=99.29  E-value=1.6e-13  Score=92.24  Aligned_cols=66  Identities=23%  Similarity=0.351  Sum_probs=57.8

Q ss_pred             CCCcccccCCCCcceeccccccccCChhHHHHHHHhhcCCCCCCCCCCCCCCCCCCccCCCCChhhhccccccCC
Q 044013           12 SSSDDETDAGTGRSYECVFCKRGFTTAQALGGHMNIHRKDRAKNRPPSSSSISDKLTFFPSPSTWDDHQRSVHTN   86 (153)
Q Consensus        12 ~~~h~~~~~~gekp~~C~~Cgk~F~~~~~L~~H~r~H~gekp~~C~~c~~~~Cgk~~~F~~~~~L~~H~~~~Ht~   86 (153)
                      |..|++.+.. ++||.|.+|++.|.....|..|+++|++++||.|+.|++.       |.....|..|++ +|..
T Consensus        25 l~~H~~~h~~-~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~C~~~-------f~~~~~l~~H~~-~~~~   90 (110)
T 2csh_A           25 RDRHMSMHLG-LRPYGCGVCGKKFKMKHHLVGHMKIHTGIKPYECNICAKR-------FMWRDSFHRHVT-SCTK   90 (110)
T ss_dssp             HHHHHHHHSC-CCSEECTTTSCEESSSHHHHHHHTTTCCCCCEECSSSCCE-------ESCHHHHHHHHH-HHHH
T ss_pred             HHHHHHHcCC-CcCccCCCCCcccCCHHHHHHHHHHcCCCCCeeCCCCcch-------hcCHHHHHHHHH-Hccc
Confidence            5667776665 7899999999999999999999999999999999966655       999999999998 6543

>2emb_A Zinc finger protein 473; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=99.29  E-value=2.9e-12  Score=72.45  Aligned_cols=43  Identities=21%  Similarity=0.376  Sum_probs=38.4

Q ss_pred             CcccccCCCCcceeccccccccCChhHHHHHHHhhcCCCCCCCC
Q 044013           14 SDDETDAGTGRSYECVFCKRGFTTAQALGGHMNIHRKDRAKNRP   57 (153)
Q Consensus        14 ~h~~~~~~gekp~~C~~Cgk~F~~~~~L~~H~r~H~gekp~~C~   57 (153)
                      +|++.+++ ++||.|.+|++.|.....|..|+++|++++||.|+
T Consensus         2 ~H~~~H~~-~k~~~C~~C~k~f~~~~~L~~H~~~H~~~~~~~C~   44 (44)
T 2emb_A            2 SSGSSGHT-RKRYECSKCQATFNLRKHLIQHQKTHAAKSGPSSG   44 (44)
T ss_dssp             CCCSCCCC-CSSEECTTTCCEESCHHHHHHHGGGGCCCCCTTCC
T ss_pred             CcccccCC-CCCeECCCCCCccCCHHHHHHHHHHcCCCCCcCCC
Confidence            56777765 88999999999999999999999999999999884

>2epq_A POZ-, at HOOK-, and zinc finger-containing protein 1; C2H2, zinc finger domain, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: g.37.1.1

Probab=99.28  E-value=3.3e-12  Score=72.63  Aligned_cols=39  Identities=23%  Similarity=0.476  Sum_probs=36.8

Q ss_pred             CCcceeccccccccCChhHHHHHHHhhcCCCCCCCCCCC
Q 044013           22 TGRSYECVFCKRGFTTAQALGGHMNIHRKDRAKNRPPSS   60 (153)
Q Consensus        22 gekp~~C~~Cgk~F~~~~~L~~H~r~H~gekp~~C~~c~   60 (153)
                      +++||.|.+|++.|.....|..|+++|++++||.|+.|+
T Consensus         7 ~~k~~~C~~C~k~f~~~~~l~~H~~~H~~~~~~~C~~cg   45 (45)
T 2epq_A            7 GEKPYSCPVCGLRFKRKDRMSYHVRSHDGSVGKSGPSSG   45 (45)
T ss_dssp             SCCSSEETTTTEECSCHHHHHHHHHHHSCCCCCCCCCCC
T ss_pred             CCCCCcCCCCCcccCCHHHHHHHHHHccCCCCCCCcCCC
Confidence            489999999999999999999999999999999999764

>2ytt_A Zinc finger protein 473; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.28  E-value=1.9e-12  Score=73.95  Aligned_cols=43  Identities=16%  Similarity=0.446  Sum_probs=37.6

Q ss_pred             ccccCCCCcceeccccccccCChhHHHHHHHhhcCCCCCCCCCC
Q 044013           16 DETDAGTGRSYECVFCKRGFTTAQALGGHMNIHRKDRAKNRPPS   59 (153)
Q Consensus        16 ~~~~~~gekp~~C~~Cgk~F~~~~~L~~H~r~H~gekp~~C~~c   59 (153)
                      ++.++ +++||.|.+|++.|.....|..|+++|++++||.|+.|
T Consensus         4 ~~~h~-~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~k~~~C~~C   46 (46)
T 2ytt_A            4 GSSGE-GEKPYQCSECGKSFSGSYRLTQHWITHTREKPSGPSSG   46 (46)
T ss_dssp             SSSCS-CCCTTCCSSSCCCCSSHHHHHHHHTHHHHCCCCSCCCC
T ss_pred             CCCCC-CCCCeeCCCCCcccCCHHHHHHHHHHcCCCCCCCCCCC
Confidence            34444 48999999999999999999999999999999999865

>2emz_A ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.28  E-value=2.3e-12  Score=73.65  Aligned_cols=43  Identities=26%  Similarity=0.702  Sum_probs=38.8

Q ss_pred             CcccccCCCCcceeccccccccCChhHHHHHHHhhcCCCCCCCC
Q 044013           14 SDDETDAGTGRSYECVFCKRGFTTAQALGGHMNIHRKDRAKNRP   57 (153)
Q Consensus        14 ~h~~~~~~gekp~~C~~Cgk~F~~~~~L~~H~r~H~gekp~~C~   57 (153)
                      +|++.+++ ++||.|.+|++.|.....|..|+++|++++||.|+
T Consensus         2 ~h~~~H~~-~k~~~C~~C~k~f~~~~~L~~H~~~H~~~k~~~C~   44 (46)
T 2emz_A            2 SSGSSGSG-ERPFKCNECGKGFGRRSHLAGHLRLHSREKSSGPS   44 (46)
T ss_dssp             CCCSCSSC-CCSCCCSSSCCCCSSHHHHHHHHHHHHHTTCCCSC
T ss_pred             CCCcCCCC-CCCeECCCCCcccCCHHHHHHHHHHhCCCCCCCCC
Confidence            56777665 88999999999999999999999999999999986

>2yu5_A Zinc finger protein 473; ZF-C2H2 domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=99.28  E-value=3.4e-12  Score=72.16  Aligned_cols=43  Identities=26%  Similarity=0.455  Sum_probs=37.7

Q ss_pred             CcccccCCCCcceeccccccccCChhHHHHHHHhhcCCCCCCCC
Q 044013           14 SDDETDAGTGRSYECVFCKRGFTTAQALGGHMNIHRKDRAKNRP   57 (153)
Q Consensus        14 ~h~~~~~~gekp~~C~~Cgk~F~~~~~L~~H~r~H~gekp~~C~   57 (153)
                      +|++.+++ ++||.|.+|++.|.....|..|+++|++++||.|.
T Consensus         2 ~H~~~H~~-~k~~~C~~C~k~f~~~~~L~~H~~~H~~~~~~~C~   44 (44)
T 2yu5_A            2 SSGSSGAG-ENPFKCSKCDRVFTQRNYLVQHERTHARKSGPSSG   44 (44)
T ss_dssp             CCSCCCSC-CCSEECSSSSCEESSSHHHHHHHHHCCCCCSSCCC
T ss_pred             CCccccCC-CCCeECCCCCchhCCHHHHHHHhHhcCCCCCCCCC
Confidence            46676655 88999999999999999999999999999999884

>1vd4_A Transcription initiation factor IIE, alpha subunit; zinc finger; NMR {Homo sapiens} SCOP: g.41.3.1

Probab=99.28  E-value=8.4e-13  Score=80.73  Aligned_cols=59  Identities=12%  Similarity=0.179  Sum_probs=49.2

Q ss_pred             CCCCcccccCCCCcceeccccccccCChhHHHHHHHhhcCCCCCCCCCCCCCCCCCCccCCCCChhhhcc
Q 044013           11 KSSSDDETDAGTGRSYECVFCKRGFTTAQALGGHMNIHRKDRAKNRPPSSSSISDKLTFFPSPSTWDDHQ   80 (153)
Q Consensus        11 ~~~~h~~~~~~gekp~~C~~Cgk~F~~~~~L~~H~r~H~gekp~~C~~c~~~~Cgk~~~F~~~~~L~~H~   80 (153)
                      +|..|++.+++ ++||.|++|++.|.....|.   ++|++++||.|+.|++.       |....++..+.
T Consensus         1 ~L~~h~~~H~~-~k~~~C~~C~k~F~~~~~l~---~~H~~~k~~~C~~C~k~-------f~~~~~~~~~~   59 (62)
T 1vd4_A            1 RIETDERDSTN-RASFKCPVCSSTFTDLEANQ---LFDPMTGTFRCTFCHTE-------VEEDESAMPKK   59 (62)
T ss_dssp             CCCCCSSSCCS-SSEEECSSSCCEEEHHHHHH---HEETTTTEEBCSSSCCB-------CEECTTCSCCC
T ss_pred             ChhhHHHHcCC-CCCccCCCCCchhccHHHhH---hhcCCCCCEECCCCCCc-------cccCccccccc
Confidence            36778888776 89999999999999988886   89999999999966655       98888776543

>2yte_A Zinc finger protein 473; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.27  E-value=4e-12  Score=70.98  Aligned_cols=42  Identities=21%  Similarity=0.474  Sum_probs=34.4

Q ss_pred             cccccCCCCcceeccccccccCChhHHHHHHHhhcCCCCCCCC
Q 044013           15 DDETDAGTGRSYECVFCKRGFTTAQALGGHMNIHRKDRAKNRP   57 (153)
Q Consensus        15 h~~~~~~gekp~~C~~Cgk~F~~~~~L~~H~r~H~gekp~~C~   57 (153)
                      |++.+++ ++||.|.+|++.|.....|..|+++|++++||.|.
T Consensus         1 H~~~H~~-~k~~~C~~C~k~f~~~~~L~~H~~~H~~~~~~~C~   42 (42)
T 2yte_A            1 GSSGSSG-EKPYSCAECKETFSDNNRLVQHQKMHTVKSGPSSG   42 (42)
T ss_dssp             CCSSSCS-CCSCBCTTTCCBCSSHHHHHHHHHHTSCCSSCCCC
T ss_pred             CCcCcCC-CCCeECCCCCCccCCHHHHHHHHHHhCCCCCCCCC
Confidence            4455544 78899999999999999999999999999998873

>2eq3_A Zinc finger protein 347; C2H2, zinc finger domain, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.27  E-value=3.6e-12  Score=72.65  Aligned_cols=43  Identities=26%  Similarity=0.572  Sum_probs=38.6

Q ss_pred             CcccccCCCCcceeccccccccCChhHHHHHHHhhcCCCCCCCC
Q 044013           14 SDDETDAGTGRSYECVFCKRGFTTAQALGGHMNIHRKDRAKNRP   57 (153)
Q Consensus        14 ~h~~~~~~gekp~~C~~Cgk~F~~~~~L~~H~r~H~gekp~~C~   57 (153)
                      .|++.+++ ++||.|++|++.|.....|..|+++|++++||.|+
T Consensus         2 ~H~~~H~~-~k~~~C~~C~k~f~~~~~L~~H~~~H~~~k~~~C~   44 (46)
T 2eq3_A            2 SSGSSGTG-EKPYECNQCGKAFSVRSSLTTHQAIHTGKKPSGPS   44 (46)
T ss_dssp             CCCCSSCC-CCSSEETTTTEECSSHHHHHHHHTTSCCCCCCCSC
T ss_pred             CcccCCCC-CCCeECCCCChhhCCHHHHHHHHHHhCCCCCCCCC
Confidence            56777665 88999999999999999999999999999999986

>2en2_A B-cell lymphoma 6 protein; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.27  E-value=3.3e-12  Score=71.42  Aligned_cols=41  Identities=22%  Similarity=0.485  Sum_probs=36.6

Q ss_pred             cccccCCCCcceeccccccccCChhHHHHHHHhhcCCCCCCC
Q 044013           15 DDETDAGTGRSYECVFCKRGFTTAQALGGHMNIHRKDRAKNR   56 (153)
Q Consensus        15 h~~~~~~gekp~~C~~Cgk~F~~~~~L~~H~r~H~gekp~~C   56 (153)
                      |++.+++ ++||.|.+|++.|.....|..|+++|++++||.|
T Consensus         2 H~~~H~~-~k~~~C~~C~k~f~~~~~L~~H~~~H~~~~~~~C   42 (42)
T 2en2_A            2 SSGSSGG-EKPYKCETCGARFVQVAHLRAHVLIHTGSGPSSG   42 (42)
T ss_dssp             CCCCCCS-SCSEECTTTCCEESSHHHHHHHTHHHHSCCSSCC
T ss_pred             CCcccCC-CCCEeCCCcChhhCCHHHHHHHHHHcCCCCCCCC
Confidence            5566654 8999999999999999999999999999999987

>2epc_A Zinc finger protein 32; zinc finger domain, C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} PDB: 2yta_A

Probab=99.26  E-value=4.8e-12  Score=70.61  Aligned_cols=41  Identities=20%  Similarity=0.378  Sum_probs=35.9

Q ss_pred             cccccCCCCcceeccccccccCChhHHHHHHHhhcCCCCCCC
Q 044013           15 DDETDAGTGRSYECVFCKRGFTTAQALGGHMNIHRKDRAKNR   56 (153)
Q Consensus        15 h~~~~~~gekp~~C~~Cgk~F~~~~~L~~H~r~H~gekp~~C   56 (153)
                      |++.+++ ++||.|.+|++.|.....|..|+++|++++||.|
T Consensus         2 H~~~H~~-~~~~~C~~C~k~f~~~~~l~~H~~~H~~~k~~~C   42 (42)
T 2epc_A            2 SSGSSGG-ETPYLCGQCGKSFTQRGSLAVHQRSCSQSGPSSG   42 (42)
T ss_dssp             CCSCCCS-SCCEECSSSCCEESSHHHHHHHHHHTTCCCCCCC
T ss_pred             CCccCCC-CCCeECCCCCcccCCHHHHHHHhhhcCCCCCCCC
Confidence            4455554 8899999999999999999999999999999987

>2ytb_A Zinc finger protein 32; zinc-finger domain, C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.26  E-value=3e-12  Score=71.51  Aligned_cols=41  Identities=20%  Similarity=0.490  Sum_probs=29.6

Q ss_pred             cccccCCCCcceeccccccccCChhHHHHHHHhhcCCCCCCC
Q 044013           15 DDETDAGTGRSYECVFCKRGFTTAQALGGHMNIHRKDRAKNR   56 (153)
Q Consensus        15 h~~~~~~gekp~~C~~Cgk~F~~~~~L~~H~r~H~gekp~~C   56 (153)
                      |++.+++ ++||.|++|++.|.....|..|+++|++++||.|
T Consensus         2 H~~~H~~-~k~~~C~~C~k~f~~~~~L~~H~~~H~~~~~~~C   42 (42)
T 2ytb_A            2 SSGSSGG-EKPYRCDQCGKAFSQKGSLIVHIRVHTGSGPSSG   42 (42)
T ss_dssp             CCCCCCS-CCSBCCTTTTCCBSSHHHHHTTGGGTSCCSCCCC
T ss_pred             CccccCC-CCCeeCCCccchhCCHHHHHHHHHHhCCCCCCCC
Confidence            4555544 6777777777777777777777777777777766

>2eox_A Zinc finger protein 473; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.26  E-value=3.8e-12  Score=71.94  Aligned_cols=43  Identities=26%  Similarity=0.488  Sum_probs=38.2

Q ss_pred             CcccccCCCCcceeccccccccCChhHHHHHHHhhcCCCCCCCC
Q 044013           14 SDDETDAGTGRSYECVFCKRGFTTAQALGGHMNIHRKDRAKNRP   57 (153)
Q Consensus        14 ~h~~~~~~gekp~~C~~Cgk~F~~~~~L~~H~r~H~gekp~~C~   57 (153)
                      .|++.+++ ++||.|.+|++.|.....|..|+++|++++||.|.
T Consensus         2 ~H~~~H~~-~~~~~C~~C~k~F~~~~~L~~H~~~H~~~~~~~C~   44 (44)
T 2eox_A            2 SSGSSGTD-SKSYNCNECGKAFTRIFHLTRHQKIHTRKSGPSSG   44 (44)
T ss_dssp             CCCCCCCC-CCCEEETTTTEEESSSHHHHTTHHHHCCCCCCSCC
T ss_pred             CCCcCCCC-CCCeECcccCcccCCHHHHHHHHHHhCCCCCCCCC
Confidence            46677665 88999999999999999999999999999999884

>2eoy_A Zinc finger protein 473; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=99.25  E-value=4.9e-12  Score=72.20  Aligned_cols=43  Identities=19%  Similarity=0.451  Sum_probs=38.0

Q ss_pred             CcccccCCCCcceeccccccccCChhHHHHHHHhhcC-CCCCCCC
Q 044013           14 SDDETDAGTGRSYECVFCKRGFTTAQALGGHMNIHRK-DRAKNRP   57 (153)
Q Consensus        14 ~h~~~~~~gekp~~C~~Cgk~F~~~~~L~~H~r~H~g-ekp~~C~   57 (153)
                      +|++.+++ ++||.|.+|++.|.....|..|+++|++ ++||.|+
T Consensus         2 ~H~~~H~~-~k~~~C~~C~k~f~~~~~L~~H~~~H~~~~~~~~C~   45 (46)
T 2eoy_A            2 SSGSSGQK-EKCFKCNKCEKTFSCSKYLTQHERIHTRGVKSGPSS   45 (46)
T ss_dssp             CCCCCCCC-SCCEECSSSCCEESSSHHHHHHHTTCCSCCTTSSSC
T ss_pred             CCccccCC-CCCEECcCCCCcCCCHHHHHHHHHHcCCCCCCCCCC
Confidence            46666665 8899999999999999999999999999 9999986

>2eou_A Zinc finger protein 473; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=99.25  E-value=6.2e-12  Score=71.10  Aligned_cols=43  Identities=21%  Similarity=0.332  Sum_probs=36.6

Q ss_pred             CcccccCCCCcceeccccccccCChhHHHHHHHhhcCCCCCCCC
Q 044013           14 SDDETDAGTGRSYECVFCKRGFTTAQALGGHMNIHRKDRAKNRP   57 (153)
Q Consensus        14 ~h~~~~~~gekp~~C~~Cgk~F~~~~~L~~H~r~H~gekp~~C~   57 (153)
                      .|++.+++ ++||.|.+|++.|.....|..|+++|++++||.|+
T Consensus         2 ~h~~~h~~-~~~~~C~~C~k~f~~~~~L~~H~~~H~~~k~~~C~   44 (44)
T 2eou_A            2 SSGSSGAA-KTTSECQECGKIFRHSSLLIEHQALHAGESGPSSG   44 (44)
T ss_dssp             CCSCSCSS-SCCCCCTTTCCCCSSHHHHHHHHHHHTTSCCCCCC
T ss_pred             CCCCCCCC-CcCeECCCCCcccCCHHHHHHHHHHHCCCCCCCCC
Confidence            35556655 88999999999999999999999999999999884

>2en3_A ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.25  E-value=3.8e-12  Score=72.61  Aligned_cols=43  Identities=19%  Similarity=0.426  Sum_probs=38.7

Q ss_pred             CcccccCCCCcceeccccccccCChhHHHHHHHhhcCCCCCCCC
Q 044013           14 SDDETDAGTGRSYECVFCKRGFTTAQALGGHMNIHRKDRAKNRP   57 (153)
Q Consensus        14 ~h~~~~~~gekp~~C~~Cgk~F~~~~~L~~H~r~H~gekp~~C~   57 (153)
                      .|++.+++ ++||.|.+|++.|.....|..|+++|++++||.|+
T Consensus         2 ~H~~~H~~-~k~~~C~~C~k~F~~~~~L~~H~~~H~~~~~~~C~   44 (46)
T 2en3_A            2 SSGSSGTG-EKPFQCKECGMNFSWSCSLFKHLRSHERTDPSGPS   44 (46)
T ss_dssp             CCCCCSCC-CCSEECSSSCCEESSSHHHHHHHHHHHHSCCSSCS
T ss_pred             ccccccCC-CCCeeCcccChhhCCHHHHHHHHHHhCCCCCCCCC
Confidence            46676665 89999999999999999999999999999999986

>2epu_A Zinc finger protein 32; C2H2, zinc finger domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.24  E-value=6.3e-12  Score=71.41  Aligned_cols=42  Identities=21%  Similarity=0.551  Sum_probs=36.9

Q ss_pred             cccccCCCCcceeccccccccCChhHHHHHHHhhcCCCCCCCC
Q 044013           15 DDETDAGTGRSYECVFCKRGFTTAQALGGHMNIHRKDRAKNRP   57 (153)
Q Consensus        15 h~~~~~~gekp~~C~~Cgk~F~~~~~L~~H~r~H~gekp~~C~   57 (153)
                      +.+.+++ ++||.|.+|++.|.....|..|+++|++++||.|+
T Consensus         3 ~~~~h~~-~k~~~C~~C~k~F~~~~~L~~H~~~H~~~k~~~C~   44 (45)
T 2epu_A            3 SGSSGTG-QKPFECTHCGKSFRAKGNLVTHQRIHTGEKSGPSS   44 (45)
T ss_dssp             CCCCCCS-CCSEEETTTTEEESSHHHHHHHHTTTSSCCCCCSC
T ss_pred             CCCCCCC-CcCccCCCCCCccCChHHHHHHHHHhCCCCCCCCC
Confidence            3344444 89999999999999999999999999999999996

>2eos_A B-cell lymphoma 6 protein; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=99.24  E-value=4.6e-12  Score=70.88  Aligned_cols=41  Identities=24%  Similarity=0.555  Sum_probs=31.0

Q ss_pred             cccccCCCCcceeccccccccCChhHHHHHHHhhcCCCCCCC
Q 044013           15 DDETDAGTGRSYECVFCKRGFTTAQALGGHMNIHRKDRAKNR   56 (153)
Q Consensus        15 h~~~~~~gekp~~C~~Cgk~F~~~~~L~~H~r~H~gekp~~C   56 (153)
                      |++.+++ ++||.|.+|++.|.....|..|+++|++++||.|
T Consensus         2 H~~~H~~-~k~~~C~~C~k~f~~~~~L~~H~~~H~~~~~~~C   42 (42)
T 2eos_A            2 SSGSSGG-EKPYPCEICGTRFRHLQTLKSHLRIHTGSGPSSG   42 (42)
T ss_dssp             CCSCCSS-SCCBCCSSSCCCBSSHHHHHHHTTTTSCCSSTTC
T ss_pred             CCcccCC-CCCEECCCCCCccCCHHHHHHHHHhcCCCCCCCC
Confidence            3444444 7788888888888888888888888888888876

>2eom_A ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=99.24  E-value=8.4e-12  Score=71.29  Aligned_cols=41  Identities=22%  Similarity=0.388  Sum_probs=36.2

Q ss_pred             ccccCCCCcceeccccccccCChhHHHHHHHhhcCCCCCCCC
Q 044013           16 DETDAGTGRSYECVFCKRGFTTAQALGGHMNIHRKDRAKNRP   57 (153)
Q Consensus        16 ~~~~~~gekp~~C~~Cgk~F~~~~~L~~H~r~H~gekp~~C~   57 (153)
                      ++.+++ ++||.|.+|++.|.....|..|+++|++++||.|.
T Consensus         4 ~~~h~~-~k~~~C~~C~k~F~~~~~L~~H~~~H~~~k~~~C~   44 (46)
T 2eom_A            4 GSSGHG-ERGHRCSDCGKFFLQASNFIQHRRIHTGEKPSGPS   44 (46)
T ss_dssp             CCCCCC-CSSCCCSSSCCCCSSHHHHHHHHHHHSSCCCSSCC
T ss_pred             CCCCCC-CCCcCCCCCCCeeCChHHHHHHHHHhCCCCCCCCC
Confidence            445544 88999999999999999999999999999999996

>2epv_A Zinc finger protein 268; C2H2, zinc finger domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.24  E-value=9.1e-12  Score=70.48  Aligned_cols=42  Identities=24%  Similarity=0.384  Sum_probs=36.9

Q ss_pred             CcccccCCCCcceeccccccccCChhHHHHHHHhhcCCCCCCC
Q 044013           14 SDDETDAGTGRSYECVFCKRGFTTAQALGGHMNIHRKDRAKNR   56 (153)
Q Consensus        14 ~h~~~~~~gekp~~C~~Cgk~F~~~~~L~~H~r~H~gekp~~C   56 (153)
                      +|++.+++ ++||.|.+|++.|.....|..|+++|++++||.|
T Consensus         2 ~H~~~H~~-~k~~~C~~C~k~F~~~~~L~~H~~~H~~~k~~~~   43 (44)
T 2epv_A            2 SSGSSGSG-EKPYECNECGKAFIWKSLLIVHERTHAGVSGPSS   43 (44)
T ss_dssp             CCCCCCCC-CCSEECSSSCCEESSHHHHHHHHGGGSSCSCCCC
T ss_pred             CCCcccCC-CcCeECCCCCcccCchHHHHHHHhHhcCCCCCCC
Confidence            56677665 8899999999999999999999999999999976

>2ent_A Krueppel-like factor 15; zinc binding, transcription factor, adipogenesis, CLCNKA, chloride channel Ka, rhodopsin, IRBP; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.21  E-value=1.2e-11  Score=70.88  Aligned_cols=44  Identities=16%  Similarity=0.404  Sum_probs=38.6

Q ss_pred             cccccCCCCcceecc--ccccccCChhHHHHHHHhhcCCCCCCCCCC
Q 044013           15 DDETDAGTGRSYECV--FCKRGFTTAQALGGHMNIHRKDRAKNRPPS   59 (153)
Q Consensus        15 h~~~~~~gekp~~C~--~Cgk~F~~~~~L~~H~r~H~gekp~~C~~c   59 (153)
                      |.+.+++ ++||.|.  +|++.|.....|..|+++|++++||.|..|
T Consensus         3 ~~~~H~~-~k~~~C~~~~C~k~f~~~~~L~~H~~~H~~~k~~~C~~C   48 (48)
T 2ent_A            3 SGSSGTG-EKPFACTWPGCGWRFSRSDELSRHRRSHSGVKPSGPSSG   48 (48)
T ss_dssp             CCCSSCC-CCCEECCSSSCCCEESSHHHHHHHHTTSCCCCSCSSCCC
T ss_pred             CCCCcCC-CCCeECCCCCCCCccCCHHHHHHHHHHhCCCCCCCCCCC
Confidence            4455554 8999998  899999999999999999999999999865

>2em0_A Zinc finger protein 224; DNA-binding, metal-binding, nuclear protein, phosphorylation, polymorphism, repeat, repressor, transcription; NMR {Homo sapiens}

Probab=99.18  E-value=5.9e-12  Score=71.81  Aligned_cols=45  Identities=16%  Similarity=0.096  Sum_probs=39.7

Q ss_pred             HHHHhhcCCCCCCCCCCCCCCCCCCccCCCCChhhhccccccCCCCCCCCCCCC
Q 044013           43 GHMNIHRKDRAKNRPPSSSSISDKLTFFPSPSTWDDHQRSVHTNNNNHSNYDSY   96 (153)
Q Consensus        43 ~H~r~H~gekp~~C~~c~~~~Cgk~~~F~~~~~L~~H~~~~Ht~~kp~~~~~~~   96 (153)
                      .|+++|++++||.|+.|++.       |.....|..|++ +|++++|| .|..|
T Consensus         2 ~H~~~H~~~k~~~C~~C~k~-------F~~~~~L~~H~~-~H~~~~~~-~C~~C   46 (46)
T 2em0_A            2 SSGSSGMGEKTWKCRECDMC-------FSQASSLRLHQN-VHVGEKPS-GPSSG   46 (46)
T ss_dssp             CCCCCSCCCCCCCCSSSCCC-------CSSHHHHHHHGG-GGSSSSCS-CSSCC
T ss_pred             CCcCccCCCcCeECCCCCcc-------cCCHHHHHHHHH-HcCCCCCc-CCCCC
Confidence            47889999999999966665       999999999999 99999999 67665

>1yui_A GAGA-factor; complex (DNA-binding protein/DNA), chromatin remodeling, DNA binding protein/DNA complex; HET: DNA; NMR {Drosophila melanogaster} SCOP: g.37.1.1 PDB: 1yuj_A*

Probab=99.18  E-value=9e-13  Score=78.12  Aligned_cols=50  Identities=4%  Similarity=0.010  Sum_probs=26.8

Q ss_pred             cccCChhHHHHHHHhhcCCCCCCCCCCCCCCCCCCccCCCCChhhhccccccCCCCCC
Q 044013           33 RGFTTAQALGGHMNIHRKDRAKNRPPSSSSISDKLTFFPSPSTWDDHQRSVHTNNNNH   90 (153)
Q Consensus        33 k~F~~~~~L~~H~r~H~gekp~~C~~c~~~~Cgk~~~F~~~~~L~~H~~~~Ht~~kp~   90 (153)
                      +.|.....|..|+++|++++||.|..|++.       |...+.|..|++ +|++++||
T Consensus         4 k~~~~~~~l~~h~~~H~~~k~~~C~~C~k~-------f~~~~~L~~H~~-~H~~~kp~   53 (54)
T 1yui_A            4 KRAKHPPGTEKPRSRSQSEQPATCPICYAV-------IRQSRNLRRHLE-LRHFAKPG   53 (54)
T ss_dssp             CCCSCSSCCCCCHHHHTSSCCEECTTTCCE-------ESSHHHHHHHHH-HHTTTSCC
T ss_pred             cccCCCcchhhHHHhcCCCCCccCCCCCcc-------cCCHHHHHHHHH-HhccCCCC
Confidence            345555555555555555555555533333       555555555555 55555554

>2dlk_A Novel protein; ZF-C2H2 domain, zinc finger protein 692, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1

Probab=99.18  E-value=5.5e-12  Score=79.64  Aligned_cols=50  Identities=22%  Similarity=0.358  Sum_probs=43.3

Q ss_pred             CCCccc-ccCCCCcceeccc--cccccCChhHHHHHHHhhcCCCCCCCCCCCCC
Q 044013           12 SSSDDE-TDAGTGRSYECVF--CKRGFTTAQALGGHMNIHRKDRAKNRPPSSSS   62 (153)
Q Consensus        12 ~~~h~~-~~~~gekp~~C~~--Cgk~F~~~~~L~~H~r~H~gekp~~C~~c~~~   62 (153)
                      |..|++ .+++ ++||.|.+  |++.|.....|..|+++|++++||.|..|++.
T Consensus        25 L~~H~~~~H~~-~~~~~C~~~~C~k~f~~~~~L~~H~~~H~~~~~~~C~~C~k~   77 (79)
T 2dlk_A           25 LNHHKKYQHIH-QKSFSCPEPACGKSFNFKKHLKEHMKLHSDTRDYICEFSGPS   77 (79)
T ss_dssp             HHHHHHHGGGS-CCCEECSCTTTCCEESSHHHHHHHHHHHHTSCCCSCCSSSCC
T ss_pred             HHHHHHHHhCC-CCCeECCCCCCcCccCCHHHHHHHHHHhCCCCCeeCCCCCCC
Confidence            556776 4544 89999999  99999999999999999999999999966655

>2ept_A Zinc finger protein 32; C2H2, zinc finger domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=99.17  E-value=2.1e-11  Score=67.72  Aligned_cols=36  Identities=28%  Similarity=0.471  Sum_probs=32.9

Q ss_pred             CCCcceeccccccccCChhHHHHHHHhhcCCCCCCC
Q 044013           21 GTGRSYECVFCKRGFTTAQALGGHMNIHRKDRAKNR   56 (153)
Q Consensus        21 ~gekp~~C~~Cgk~F~~~~~L~~H~r~H~gekp~~C   56 (153)
                      .+++||.|.+|++.|.....|..|+++|++++||.|
T Consensus         6 ~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~k~~~C   41 (41)
T 2ept_A            6 SGQRVYECQECGKSFRQKGSLTLHERIHTGSGPSSG   41 (41)
T ss_dssp             CCCCCEECSSSCCEESSHHHHHHHGGGCCCCSCSCC
T ss_pred             CCCCCeECCCCCCCcCCHHHHHHHHHHhCCCCCcCC
Confidence            358899999999999999999999999999999987

>2dmi_A Teashirt homolog 3; zinc finger protein 537, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=99.17  E-value=9.2e-13  Score=89.10  Aligned_cols=70  Identities=7%  Similarity=-0.081  Sum_probs=56.3

Q ss_pred             CCCcccc--cCCCCcc-eecccccccc--CChhHHHHHHHhhcCCCCCCCCCCCCCCCCCCccCCCCChhhhccccccCC
Q 044013           12 SSSDDET--DAGTGRS-YECVFCKRGF--TTAQALGGHMNIHRKDRAKNRPPSSSSISDKLTFFPSPSTWDDHQRSVHTN   86 (153)
Q Consensus        12 ~~~h~~~--~~~gekp-~~C~~Cgk~F--~~~~~L~~H~r~H~gekp~~C~~c~~~~Cgk~~~F~~~~~L~~H~~~~Ht~   86 (153)
                      |..|++.  +.. +++ +.|.+|++.|  .....|..|+++|++++||.|+.|++.       |.....|..|++ +|..
T Consensus        35 L~~H~~~~~h~~-~~~~~~C~~C~~~f~f~~~~~l~~H~~~H~~~~~~~C~~C~k~-------f~~~~~L~~H~~-~hh~  105 (115)
T 2dmi_A           35 LTVHMNETGHYR-DDNHETDNNNPKRWSKPRKRSLLEMEGKEDAQKVLKCMYCGHS-------FESLQDLSVHMI-KTKH  105 (115)
T ss_dssp             HHHHHHHTCCCB-CSCCCCCCCCCSCCSSCCCCCCCCCCCSCCCCSSCBCSSSCCB-------CSSHHHHHHHHH-HTTT
T ss_pred             HHHHHHHhCccc-cCCCccCCCCCcccccccHHHHHHHhhccCCCcceECCCCCCc-------cCCHHHHHHHHH-HhCC
Confidence            4556665  433 444 5599999999  899999999999999999999966655       999999999999 7765


Q ss_pred             CCCC
Q 044013           87 NNNH   90 (153)
Q Consensus        87 ~kp~   90 (153)
                      ....
T Consensus       106 ~~~~  109 (115)
T 2dmi_A          106 YQKV  109 (115)
T ss_dssp             TTCS
T ss_pred             cccC
Confidence            5543

>2ely_A Zinc finger protein 224; DNA-binding, metal-binding, nuclear protein, phosphorylation, polymorphism, repeat, repressor, transcription; NMR {Homo sapiens} SCOP: k.12.1.1 PDB: 2ena_A 2en4_A

Probab=99.17  E-value=6e-12  Score=71.86  Aligned_cols=45  Identities=13%  Similarity=0.133  Sum_probs=39.6

Q ss_pred             HHHHhhcCCCCCCCCCCCCCCCCCCccCCCCChhhhccccccCCCCCCCCCCCC
Q 044013           43 GHMNIHRKDRAKNRPPSSSSISDKLTFFPSPSTWDDHQRSVHTNNNNHSNYDSY   96 (153)
Q Consensus        43 ~H~r~H~gekp~~C~~c~~~~Cgk~~~F~~~~~L~~H~~~~Ht~~kp~~~~~~~   96 (153)
                      .|+++|++++||.|+.|++.       |.....|..|++ +|++++|| .|..|
T Consensus         2 ~H~~~H~~~k~~~C~~C~k~-------f~~~~~L~~H~~-~H~~~k~~-~C~~C   46 (46)
T 2ely_A            2 SSGSSGTGEKPFKCVECGKG-------FSRRSALNVHHK-LHTGEKPS-GPSSG   46 (46)
T ss_dssp             CCCCCCCCCCSBCCSSSCCC-------BSSTTHHHHHHH-HHSCCSSC-SCCCC
T ss_pred             CCCCCCCCCCCcccCccCcc-------cCCHHHHHHHHH-HcCCCCCC-CCCCC
Confidence            37889999999999966666       999999999999 99999999 67665

>2yrm_A B-cell lymphoma 6 protein; ZF-C2H2, zinc binding, DNA binding, structural genomics, NPPSFA; NMR {Homo sapiens}

Probab=99.16  E-value=2.8e-11  Score=68.16  Aligned_cols=36  Identities=17%  Similarity=0.313  Sum_probs=33.9

Q ss_pred             CCcceeccccccccCChhHHHHHHHhhcCCCCCCCC
Q 044013           22 TGRSYECVFCKRGFTTAQALGGHMNIHRKDRAKNRP   57 (153)
Q Consensus        22 gekp~~C~~Cgk~F~~~~~L~~H~r~H~gekp~~C~   57 (153)
                      +++||.|.+|++.|.....|..|+++|++++||.|+
T Consensus         7 ~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~k~~~C~   42 (43)
T 2yrm_A            7 GNGAFFCNECDCRFSEEASLKRHTLQTHSDKSGPSS   42 (43)
T ss_dssp             SSCCBCCSSSCCCBSSHHHHHHHHHHHTCTTCSSSC
T ss_pred             CCCCEECCCCCCeeCChHHHHHHHHhhCCCCCccCC
Confidence            488999999999999999999999999999999986

>2ytn_A Zinc finger protein 347; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.16  E-value=6.9e-12  Score=71.50  Aligned_cols=45  Identities=13%  Similarity=0.101  Sum_probs=39.6

Q ss_pred             HHHHhhcCCCCCCCCCCCCCCCCCCccCCCCChhhhccccccCCCCCCCCCCCC
Q 044013           43 GHMNIHRKDRAKNRPPSSSSISDKLTFFPSPSTWDDHQRSVHTNNNNHSNYDSY   96 (153)
Q Consensus        43 ~H~r~H~gekp~~C~~c~~~~Cgk~~~F~~~~~L~~H~~~~Ht~~kp~~~~~~~   96 (153)
                      .|+++|++++||.|+.|++.       |.....|..|++ +|++++|| .|..|
T Consensus         2 ~H~~~H~~~k~~~C~~C~k~-------F~~~~~L~~H~~-~H~~~k~~-~C~~C   46 (46)
T 2ytn_A            2 SSGSSGTGKKPYKCNECGKV-------FTQNSHLARHRG-IHTGEKPS-GPSSG   46 (46)
T ss_dssp             CCCCCCSCCSSCBCTTTCCB-------CSSHHHHHHHGG-GTSCCCCC-SCCCC
T ss_pred             CCCcCCCCCcCeECCCCCCe-------eCCHHHHHHHhh-hcCCCCCC-CCCCC
Confidence            47889999999999966666       999999999999 99999999 66655

>2ytr_A Zinc finger protein 347; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.16  E-value=8.3e-12  Score=71.07  Aligned_cols=45  Identities=18%  Similarity=0.197  Sum_probs=39.8

Q ss_pred             HHHHhhcCCCCCCCCCCCCCCCCCCccCCCCChhhhccccccCCCCCCCCCCCC
Q 044013           43 GHMNIHRKDRAKNRPPSSSSISDKLTFFPSPSTWDDHQRSVHTNNNNHSNYDSY   96 (153)
Q Consensus        43 ~H~r~H~gekp~~C~~c~~~~Cgk~~~F~~~~~L~~H~~~~Ht~~kp~~~~~~~   96 (153)
                      .|+++|++++||.|+.|++.       |.....|..|++ +|++++|| .|..|
T Consensus         2 ~H~~~H~~~k~~~C~~C~k~-------f~~~~~L~~H~~-~H~~~~~~-~C~~C   46 (46)
T 2ytr_A            2 SSGSSGTGEKPYKCNECGKA-------FSQTSKLARHQR-IHTGEKPS-GPSSG   46 (46)
T ss_dssp             CSSCCCSSCCTTCCTTTCCC-------CSSHHHHHHHHT-TTTTCSCC-CSCCC
T ss_pred             CCCcCCCCCcCcCCCCCCCc-------cCCHHHHHHHHH-hcCCCCCC-CCCCC
Confidence            47889999999999966666       999999999999 99999999 67665

>4gzn_C ZFP-57, zinc finger protein 57; transcription-DNA complex; HET: DNA 5CM; 0.99A {Mus musculus}

Probab=99.15  E-value=1.3e-12  Score=80.05  Aligned_cols=51  Identities=12%  Similarity=0.225  Sum_probs=43.2

Q ss_pred             CCCCCCCCCCCCCCCCCCccCCCCChhhhccccccCCCCCCCCCCCCccccccCCcccchh
Q 044013           50 KDRAKNRPPSSSSISDKLTFFPSPSTWDDHQRSVHTNNNNHSNYDSYGQNYHQHLNMIGDE  110 (153)
Q Consensus        50 gekp~~C~~c~~~~Cgk~~~F~~~~~L~~H~~~~Ht~~kp~~~~~~~~~~f~~~~~~~~~~  110 (153)
                      .||||.|..|++.       |...+.|..|++ +|++++|| .|..|+++|.+... |..+
T Consensus         1 SEKpy~C~~C~k~-------F~~~~~L~~H~~-~Ht~ekp~-~C~~C~k~F~~~~~-L~~H   51 (60)
T 4gzn_C            1 SERPFFCNFCGKT-------YRDASGLSRHRR-AHLGYRPR-SCPECGKCFRDQSE-VNRH   51 (60)
T ss_dssp             CCCCEECTTTCCE-------ESSHHHHHHHHH-HHHTCCCE-ECTTTCCEESSHHH-HHHH
T ss_pred             CCCCccCCCCCCE-------eCCHHHHHHHHH-HhCCCcCe-ECCCCCCCcCCHHH-HHHH
Confidence            3899999966665       999999999999 99999999 79999999966555 4443

>1x6f_A Zinc finger protein 462; zinc finger domain, KIAA1803, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: g.37.1.1

Probab=99.15  E-value=1e-11  Score=81.57  Aligned_cols=60  Identities=17%  Similarity=0.333  Sum_probs=50.0

Q ss_pred             cccccCCCCcceeccccccccCChhHHHHHHHhhcCCCCCCCCCCCCCCCCCCccCCCCChhhhccccccCCC
Q 044013           15 DDETDAGTGRSYECVFCKRGFTTAQALGGHMNIHRKDRAKNRPPSSSSISDKLTFFPSPSTWDDHQRSVHTNN   87 (153)
Q Consensus        15 h~~~~~~gekp~~C~~Cgk~F~~~~~L~~H~r~H~gekp~~C~~c~~~~Cgk~~~F~~~~~L~~H~~~~Ht~~   87 (153)
                      +.++++ +++||.|.+|++.|.....|..|+++|++++||.|..           +.....|..|++ +|++.
T Consensus        16 ~~~~H~-~~kpy~C~~C~k~F~~~~~L~~H~~~Ht~ekp~~C~~-----------~~~~~~~~~~~~-~~~~~   75 (88)
T 1x6f_A           16 GNGPRL-QNSTYQCKHCDSKLQSTAELTSHLNIHNEEFQKRAKR-----------QERRKQLLSKQK-YADGA   75 (88)
T ss_dssp             CCCSCC-CCSCEECSSSCCEESSHHHHHHHHHHHHHHHHHHCCC-----------CSCCCCCCCCCC-CCCCS
T ss_pred             cccccC-CCCCCcCCCCCCEeCCHHHHHHHHHHhCCCCCcccch-----------hhhHHHHHhhhc-ccccc
Confidence            344454 4899999999999999999999999999999999974           445667888888 88873

>2ytq_A Zinc finger protein 268; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.15  E-value=7.8e-12  Score=71.36  Aligned_cols=45  Identities=16%  Similarity=0.086  Sum_probs=39.6

Q ss_pred             HHHHhhcCCCCCCCCCCCCCCCCCCccCCCCChhhhccccccCCCCCCCCCCCC
Q 044013           43 GHMNIHRKDRAKNRPPSSSSISDKLTFFPSPSTWDDHQRSVHTNNNNHSNYDSY   96 (153)
Q Consensus        43 ~H~r~H~gekp~~C~~c~~~~Cgk~~~F~~~~~L~~H~~~~Ht~~kp~~~~~~~   96 (153)
                      .|+++|++++||.|+.|++.       |.....|..|++ +|++++|| .|..|
T Consensus         2 ~H~~~H~~~k~~~C~~C~k~-------f~~~~~L~~H~~-~H~~~k~~-~C~~C   46 (46)
T 2ytq_A            2 SSGSSGAGEKPYGCSECGKA-------FSSKSYLIIHMR-THSGEKPS-GPSSG   46 (46)
T ss_dssp             CCSSCSSCCCSCBCSSSCCB-------CSCHHHHHHHHT-TTCCSCSS-CCCCC
T ss_pred             CCCcCcCCCCCcCCCccChh-------hCChHHHHHHHH-HhCCCCCC-CCCCC
Confidence            37889999999999966665       999999999999 99999999 67665

>2epz_A Zinc finger protein 28 homolog; C2H2, zinc finger domain, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.15  E-value=7.6e-12  Score=71.33  Aligned_cols=45  Identities=13%  Similarity=0.158  Sum_probs=39.6

Q ss_pred             HHHHhhcCCCCCCCCCCCCCCCCCCccCCCCChhhhccccccCCCCCCCCCCCC
Q 044013           43 GHMNIHRKDRAKNRPPSSSSISDKLTFFPSPSTWDDHQRSVHTNNNNHSNYDSY   96 (153)
Q Consensus        43 ~H~r~H~gekp~~C~~c~~~~Cgk~~~F~~~~~L~~H~~~~Ht~~kp~~~~~~~   96 (153)
                      .|+++|++++||.|+.|++.       |.....|..|++ +|++++|| .|..|
T Consensus         2 ~H~~~H~~~k~~~C~~C~k~-------f~~~~~L~~H~~-~H~~~k~~-~C~~C   46 (46)
T 2epz_A            2 SSGSSGTGEKPFDCIDCGKA-------FSDHIGLNQHRR-IHTGEKPS-GPSSG   46 (46)
T ss_dssp             CCCSSCCCCCSBCCTTTCCC-------BSSHHHHHHHHT-TTTTCCCC-SSCCC
T ss_pred             CCCCCcCCCCCeECCCCCce-------eCCHHHHHHHHH-HhCCCCCC-CCCCC
Confidence            37889999999999966666       999999999999 99999999 67655

>2elz_A Zinc finger protein 224; DNA-binding, metal-binding, nuclear protein, phosphorylation, polymorphism, repeat, repressor, transcription; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.15  E-value=7.2e-12  Score=71.50  Aligned_cols=45  Identities=16%  Similarity=0.132  Sum_probs=39.6

Q ss_pred             HHHHhhcCCCCCCCCCCCCCCCCCCccCCCCChhhhccccccCCCCCCCCCCCC
Q 044013           43 GHMNIHRKDRAKNRPPSSSSISDKLTFFPSPSTWDDHQRSVHTNNNNHSNYDSY   96 (153)
Q Consensus        43 ~H~r~H~gekp~~C~~c~~~~Cgk~~~F~~~~~L~~H~~~~Ht~~kp~~~~~~~   96 (153)
                      .|+++|++++||.|+.|++.       |.....|..|++ +|++++|| .|..|
T Consensus         2 ~h~~~h~~~k~~~C~~C~k~-------F~~~~~L~~H~~-~H~~~~~~-~C~~C   46 (46)
T 2elz_A            2 SSGSSGSVEKPYKCEDCGKG-------YNRRLNLDMHQR-VHMGEKTS-GPSSG   46 (46)
T ss_dssp             CCCSCCCCCSSCBCSSSCCB-------CSSHHHHHHHGG-GGGSCCCC-CSCCC
T ss_pred             CCCCCCCCCCCeeCcccCch-------hCCHHHHHHHHH-hcCCCCCC-CCCCC
Confidence            37889999999999966655       999999999999 99999999 67665

>2eq4_A Zinc finger protein 224; C2H2, zinc finger domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.15  E-value=5.7e-12  Score=71.77  Aligned_cols=45  Identities=16%  Similarity=0.153  Sum_probs=39.7

Q ss_pred             HHHHhhcCCCCCCCCCCCCCCCCCCccCCCCChhhhccccccCCCCCCCCCCCC
Q 044013           43 GHMNIHRKDRAKNRPPSSSSISDKLTFFPSPSTWDDHQRSVHTNNNNHSNYDSY   96 (153)
Q Consensus        43 ~H~r~H~gekp~~C~~c~~~~Cgk~~~F~~~~~L~~H~~~~Ht~~kp~~~~~~~   96 (153)
                      .|+++|++++||.|+.|++.       |.....|..|++ +|++++|| .|..|
T Consensus         2 ~H~~~H~~~k~~~C~~C~k~-------f~~~~~L~~H~~-~H~~~~~~-~C~~C   46 (46)
T 2eq4_A            2 SSGSSGTGEKLYNCKECGKS-------FSRAPCLLKHER-LHSGEKPS-GPSSG   46 (46)
T ss_dssp             CCCCCSSCCCCCCBTTTTBC-------CSCHHHHHHHHH-HCCSSSCC-CCCCC
T ss_pred             CCcccCCCCCCeECCCCCCc-------cCchHHHHHHHH-hcCCCCCC-CCCCC
Confidence            47889999999999966555       999999999999 99999999 67665

>2eop_A Zinc finger protein 268; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.15  E-value=7.9e-12  Score=71.17  Aligned_cols=45  Identities=22%  Similarity=0.172  Sum_probs=39.6

Q ss_pred             HHHHhhcCCCCCCCCCCCCCCCCCCccCCCCChhhhccccccCCCCCCCCCCCC
Q 044013           43 GHMNIHRKDRAKNRPPSSSSISDKLTFFPSPSTWDDHQRSVHTNNNNHSNYDSY   96 (153)
Q Consensus        43 ~H~r~H~gekp~~C~~c~~~~Cgk~~~F~~~~~L~~H~~~~Ht~~kp~~~~~~~   96 (153)
                      .|+++|++++||.|+.|++.       |.....|..|++ +|++++|| .|..|
T Consensus         2 ~H~~~H~~~~~~~C~~C~k~-------f~~~~~L~~H~~-~H~~~k~~-~C~~C   46 (46)
T 2eop_A            2 SSGSSGTGEKPHECRECGKS-------FSFNSQLIVHQR-IHTGENPS-GPSSG   46 (46)
T ss_dssp             CCCCSCCCCCSCBCTTTCCB-------CSSHHHHHHHHT-TTTTSCCS-CCCCC
T ss_pred             CCccccCCCCCeeCCCCCch-------hCCHHHHHHHHH-HcCCCCCC-CCCCC
Confidence            47889999999999966666       999999999999 99999999 66655

>2eoq_A Zinc finger protein 224; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.14  E-value=7.7e-12  Score=71.29  Aligned_cols=45  Identities=18%  Similarity=0.098  Sum_probs=39.6

Q ss_pred             HHHHhhcCCCCCCCCCCCCCCCCCCccCCCCChhhhccccccCCCCCCCCCCCC
Q 044013           43 GHMNIHRKDRAKNRPPSSSSISDKLTFFPSPSTWDDHQRSVHTNNNNHSNYDSY   96 (153)
Q Consensus        43 ~H~r~H~gekp~~C~~c~~~~Cgk~~~F~~~~~L~~H~~~~Ht~~kp~~~~~~~   96 (153)
                      .|+++|++++||.|+.|++.       |.....|..|++ +|++++|| .|..|
T Consensus         2 ~H~~~H~~~~~~~C~~C~k~-------f~~~~~L~~H~~-~H~~~k~~-~C~~C   46 (46)
T 2eoq_A            2 SSGSSGTGEKPFKCDICGKS-------FCGRSRLNRHSM-VHTAEKPS-GPSSG   46 (46)
T ss_dssp             CCCCCSSSSCSCCCSSSCCC-------CSSHHHHHHHHH-HTTCCCSS-SCCCC
T ss_pred             CCCCCCCCCCCcCCCcCCch-------hCCHHHHHHHHH-HcCCCCCC-CCCCC
Confidence            47889999999999966666       999999999999 99999999 67655

>2emf_A Zinc finger protein 484; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.13  E-value=5.7e-12  Score=71.94  Aligned_cols=45  Identities=18%  Similarity=0.147  Sum_probs=39.5

Q ss_pred             HHHHhhcCCCCCCCCCCCCCCCCCCccCCCCChhhhccccccCCCCCCCCCCCC
Q 044013           43 GHMNIHRKDRAKNRPPSSSSISDKLTFFPSPSTWDDHQRSVHTNNNNHSNYDSY   96 (153)
Q Consensus        43 ~H~r~H~gekp~~C~~c~~~~Cgk~~~F~~~~~L~~H~~~~Ht~~kp~~~~~~~   96 (153)
                      .|+++|++++||.|+.|++.       |.....|..|++ +|++++|| .|..|
T Consensus         2 ~H~~~H~~~k~~~C~~C~k~-------F~~~~~L~~H~~-~H~~~k~~-~C~~c   46 (46)
T 2emf_A            2 SSGSSGTGGKHFECTECGKA-------FTRKSTLSMHQK-IHTGEKPS-GPSSG   46 (46)
T ss_dssp             CCCSSSSSSCCEECSSSCCE-------ESCHHHHHHHGG-GTSCSSCS-CCCCC
T ss_pred             ccccccCCCCCeECCCCCch-------hCCHHHHHHHHH-HhCCCCCC-CCCCC
Confidence            37889999999999966666       999999999999 99999999 66655

>2ytg_A ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.13  E-value=7.9e-12  Score=71.24  Aligned_cols=45  Identities=18%  Similarity=0.147  Sum_probs=39.8

Q ss_pred             HHHHhhcCCCCCCCCCCCCCCCCCCccCCCCChhhhccccccCCCCCCCCCCCC
Q 044013           43 GHMNIHRKDRAKNRPPSSSSISDKLTFFPSPSTWDDHQRSVHTNNNNHSNYDSY   96 (153)
Q Consensus        43 ~H~r~H~gekp~~C~~c~~~~Cgk~~~F~~~~~L~~H~~~~Ht~~kp~~~~~~~   96 (153)
                      .|+++|++++||.|+.|++.       |.....|..|++ +|++++|| .|..|
T Consensus         2 ~H~~~H~~~~~~~C~~C~k~-------f~~~~~L~~H~~-~H~~~k~~-~C~~C   46 (46)
T 2ytg_A            2 SSGSSGTGEKPFKCGECGKS-------YNQRVHLTQHQR-VHTGEKPS-GPSSG   46 (46)
T ss_dssp             CCCCCCSSCCSEECTTTCCE-------ESSSHHHHTTGG-GGSSCCSS-CSCCC
T ss_pred             CCCCCCCCCCCeECCCCCcc-------cCCHHHHHHHHH-HcCCCCCC-CCCCC
Confidence            47889999999999966666       999999999999 99999999 67665

>2gqj_A Zinc finger protein KIAA1196; ZF-C2H2 like domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=99.13  E-value=3.4e-12  Score=84.66  Aligned_cols=68  Identities=4%  Similarity=0.006  Sum_probs=57.5

Q ss_pred             ccCChhHHHHHHHhhcCCCCCCCCCCCCCCCCCCccCC-CCChhhhccccccCC-CCCCCCCCCCccccccCCcccchhh
Q 044013           34 GFTTAQALGGHMNIHRKDRAKNRPPSSSSISDKLTFFP-SPSTWDDHQRSVHTN-NNNHSNYDSYGQNYHQHLNMIGDEI  111 (153)
Q Consensus        34 ~F~~~~~L~~H~r~H~gekp~~C~~c~~~~Cgk~~~F~-~~~~L~~H~~~~Ht~-~kp~~~~~~~~~~f~~~~~~~~~~~  111 (153)
                      .+.....+..|+++|++++||.|..|++.       |. ....|..|++ +|++ ++|| .|.+|++.|.+... |..++
T Consensus         5 s~~~~~~~~~h~~~h~~~~~~~C~~C~k~-------f~~~~~~L~~H~~-~h~~~~~~~-~C~~C~k~F~~~~~-L~~H~   74 (98)
T 2gqj_A            5 SSGPGGPEEQWQRAIHERGEAVCPTCNVV-------TRKTLVGLKKHME-VCQKLQDAL-KCQHCRKQFKSKAG-LNYHT   74 (98)
T ss_dssp             CCCCCCSCSHHHHTTTTTSCCCCTTTCCC-------CSSCSHHHHHHHH-HHHHHHHHH-SCSSSCCCCSCHHH-HHHHH
T ss_pred             CCCCCCcHHHHHHHhccCCCcCCCCCCCC-------hhhhHHHHHHHHH-HHcCCCCCE-ECCCCCCccCCHHH-HHHHH
Confidence            45667778899999999999999966555       99 9999999999 9998 9999 79999999966555 55553

>2emk_A Zinc finger protein 28 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 PDB: 2ysv_A

Probab=99.12  E-value=7.2e-12  Score=71.51  Aligned_cols=45  Identities=18%  Similarity=0.177  Sum_probs=39.4

Q ss_pred             HHHHhhcCCCCCCCCCCCCCCCCCCccCCCCChhhhccccccCCCCCCCCCCCC
Q 044013           43 GHMNIHRKDRAKNRPPSSSSISDKLTFFPSPSTWDDHQRSVHTNNNNHSNYDSY   96 (153)
Q Consensus        43 ~H~r~H~gekp~~C~~c~~~~Cgk~~~F~~~~~L~~H~~~~Ht~~kp~~~~~~~   96 (153)
                      +|+++|++++||.|+.|++.       |.....|..|++ +|++++|| .|..|
T Consensus         2 ~H~~~H~~~k~~~C~~C~k~-------F~~~~~L~~H~~-~H~~~k~~-~C~~C   46 (46)
T 2emk_A            2 SSGSSGTGEKPYECKECGKA-------FSQTTHLIQHQR-VHTGEKPS-GPSSG   46 (46)
T ss_dssp             CCCCCCSSSCSCBCSSSCCB-------CSCHHHHHHHHH-HHSSCCCS-SCCCC
T ss_pred             CCCCccCCCCceECCCCCch-------hCCHHHHHHHHH-HcCCCCCC-CCCCC
Confidence            47889999999999966655       999999999999 99999999 56654

>2el4_A Zinc finger protein 268; alternative splicing, DNA-binding, metal-binding, nuclear protein, repeat, transcription, transcription regulation; NMR {Homo sapiens} SCOP: k.12.1.1 PDB: 2eog_A 2em1_A 2emw_A 2eok_A

Probab=99.12  E-value=6.1e-12  Score=71.66  Aligned_cols=45  Identities=18%  Similarity=0.051  Sum_probs=39.7

Q ss_pred             HHHHhhcCCCCCCCCCCCCCCCCCCccCCCCChhhhccccccCCCCCCCCCCCC
Q 044013           43 GHMNIHRKDRAKNRPPSSSSISDKLTFFPSPSTWDDHQRSVHTNNNNHSNYDSY   96 (153)
Q Consensus        43 ~H~r~H~gekp~~C~~c~~~~Cgk~~~F~~~~~L~~H~~~~Ht~~kp~~~~~~~   96 (153)
                      .|+++|++++||.|+.|++.       |.....|..|++ +|++++|| .|..|
T Consensus         2 ~H~~~H~~~k~~~C~~C~k~-------f~~~~~L~~H~~-~H~~~k~~-~C~~C   46 (46)
T 2el4_A            2 SSGSSGTGVKPYGCSQCAKT-------FSLKSQLIVHQR-SHTGVKPS-GPSSG   46 (46)
T ss_dssp             CCCCCSCCCCSEECSSSSCE-------ESSHHHHHHHGG-GSSSCCCS-CCTTC
T ss_pred             ccccCCCCCCceECCCCCch-------hCCHHHHHHHHH-HhCCCCCC-CCCCC
Confidence            47889999999999966666       999999999999 99999999 67665

>2eml_A Zinc finger protein 28 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.12  E-value=6e-12  Score=71.76  Aligned_cols=45  Identities=13%  Similarity=0.161  Sum_probs=39.7

Q ss_pred             HHHHhhcCCCCCCCCCCCCCCCCCCccCCCCChhhhccccccCCCCCCCCCCCC
Q 044013           43 GHMNIHRKDRAKNRPPSSSSISDKLTFFPSPSTWDDHQRSVHTNNNNHSNYDSY   96 (153)
Q Consensus        43 ~H~r~H~gekp~~C~~c~~~~Cgk~~~F~~~~~L~~H~~~~Ht~~kp~~~~~~~   96 (153)
                      .|+++|++++||.|+.|++.       |.....|..|++ +|++++|| .|..|
T Consensus         2 ~H~~~H~~~k~~~C~~C~k~-------f~~~~~L~~H~~-~H~~~~~~-~C~~C   46 (46)
T 2eml_A            2 SSGSSGTGEKPYECSVCGKA-------FSHRQSLSVHQR-IHSGKKPS-GPSSG   46 (46)
T ss_dssp             CCCCCCSSCCSEECSSSCCE-------ESSHHHHHHHHG-GGSSCCCS-CSSCC
T ss_pred             CccCCcCCCCCeeCCCcCCc-------cCCHHHHHHHHH-HhcCCCCC-CCCCC
Confidence            47889999999999966665       999999999999 99999999 67665

>2eme_A Zinc finger protein 473; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.11  E-value=4e-12  Score=72.44  Aligned_cols=45  Identities=16%  Similarity=0.099  Sum_probs=39.9

Q ss_pred             HHHHhhcCCCCCCCCCCCCCCCCCCccCCCCChhhhccccccCCCCCCCCCCCC
Q 044013           43 GHMNIHRKDRAKNRPPSSSSISDKLTFFPSPSTWDDHQRSVHTNNNNHSNYDSY   96 (153)
Q Consensus        43 ~H~r~H~gekp~~C~~c~~~~Cgk~~~F~~~~~L~~H~~~~Ht~~kp~~~~~~~   96 (153)
                      .|+++|++++||.|+.|++.       |.....|..|++ +|++++|| .|..|
T Consensus         2 ~H~~~H~~~k~~~C~~C~k~-------f~~~~~L~~H~~-~H~~~~~~-~C~~C   46 (46)
T 2eme_A            2 SSGSSGSGEKPYVCDYCGKA-------FGLSAELVRHQR-IHTGEKPS-GPSSG   46 (46)
T ss_dssp             CCCCTTCCCCSEECSSSCCE-------ESSHHHHHHHHG-GGCCCSCC-SSCCC
T ss_pred             CCCCCCCCCCCeECCCCChh-------hCCHHHHHHHHH-hcCCCCCC-CCCCC
Confidence            48899999999999966666       999999999999 99999999 67665

>2ene_A Zinc finger protein 347; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.11  E-value=5.8e-12  Score=71.82  Aligned_cols=45  Identities=18%  Similarity=0.152  Sum_probs=39.7

Q ss_pred             HHHHhhcCCCCCCCCCCCCCCCCCCccCCCCChhhhccccccCCCCCCCCCCCC
Q 044013           43 GHMNIHRKDRAKNRPPSSSSISDKLTFFPSPSTWDDHQRSVHTNNNNHSNYDSY   96 (153)
Q Consensus        43 ~H~r~H~gekp~~C~~c~~~~Cgk~~~F~~~~~L~~H~~~~Ht~~kp~~~~~~~   96 (153)
                      .|+++|++++||.|+.|++.       |...+.|..|++ +|++++|| .|..|
T Consensus         2 ~H~~~H~~~k~~~C~~C~k~-------f~~~~~L~~H~~-~H~~~k~~-~C~~C   46 (46)
T 2ene_A            2 SSGSSGTGEKPYKCNECGKV-------FRHNSYLSRHQR-IHTGEKPS-GPSSG   46 (46)
T ss_dssp             CCCSSCCCSSSEECSSSCCE-------ESSHHHHHHHHT-TTCCCCCC-SCCCC
T ss_pred             CcccCCCCCCCeECCCCCch-------hCChHHHHHHHh-hcCCCCCC-CCCCC
Confidence            47889999999999966655       999999999999 99999999 67665

>2eov_A Zinc finger protein 484; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.11  E-value=9.3e-12  Score=70.85  Aligned_cols=45  Identities=18%  Similarity=0.126  Sum_probs=39.7

Q ss_pred             HHHHhhcCCCCCCCCCCCCCCCCCCccCCCCChhhhccccccCCCCCCCCCCCC
Q 044013           43 GHMNIHRKDRAKNRPPSSSSISDKLTFFPSPSTWDDHQRSVHTNNNNHSNYDSY   96 (153)
Q Consensus        43 ~H~r~H~gekp~~C~~c~~~~Cgk~~~F~~~~~L~~H~~~~Ht~~kp~~~~~~~   96 (153)
                      +|+++|++++||.|+.|++.       |.....|..|++ +|++++|| .|..|
T Consensus         2 ~H~~~H~~~~~~~C~~C~k~-------f~~~~~L~~H~~-~H~~~~~~-~C~~C   46 (46)
T 2eov_A            2 SSGSSGTGEKPYKCSDCGKS-------FTWKSRLRIHQK-CHTGERHS-GPSSG   46 (46)
T ss_dssp             CCCCCCSSCCSCBCSSSCCB-------CSSHHHHHHHHH-HHSCCSSC-CSCCC
T ss_pred             CCCCCCCCCCCccCCccChh-------hCCHHHHHHHHH-hcCCCCCC-CCCCC
Confidence            47889999999999966655       999999999999 99999999 67665

>2eoe_A Zinc finger protein 347; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.11  E-value=6.5e-12  Score=71.54  Aligned_cols=45  Identities=18%  Similarity=0.164  Sum_probs=39.7

Q ss_pred             HHHHhhcCCCCCCCCCCCCCCCCCCccCCCCChhhhccccccCCCCCCCCCCCC
Q 044013           43 GHMNIHRKDRAKNRPPSSSSISDKLTFFPSPSTWDDHQRSVHTNNNNHSNYDSY   96 (153)
Q Consensus        43 ~H~r~H~gekp~~C~~c~~~~Cgk~~~F~~~~~L~~H~~~~Ht~~kp~~~~~~~   96 (153)
                      .|+++|++++||.|+.|++.       |.....|..|++ +|++++|| .|..|
T Consensus         2 ~H~~~H~~~~~~~C~~C~k~-------F~~~~~L~~H~~-~H~~~~~~-~C~~C   46 (46)
T 2eoe_A            2 SSGSSGTGEKPYKCNECGKV-------FTQNSHLANHQR-IHTGVKPS-GPSSG   46 (46)
T ss_dssp             CCSSCCCCCCSSEETTTTEE-------CSSHHHHHHHHG-GGSCCCSC-SSCCC
T ss_pred             CCCCCCCCCCCeECCCcChh-------hCCHHHHHHHHH-HcCCCCCC-CCCCC
Confidence            47889999999999966655       999999999999 99999999 67665

>1yui_A GAGA-factor; complex (DNA-binding protein/DNA), chromatin remodeling, DNA binding protein/DNA complex; HET: DNA; NMR {Drosophila melanogaster} SCOP: g.37.1.1 PDB: 1yuj_A*

Probab=99.11  E-value=5e-11  Score=70.41  Aligned_cols=46  Identities=9%  Similarity=0.202  Sum_probs=41.4

Q ss_pred             CCCCCCcccccCCCCcceeccccccccCChhHHHHHHHhhcCCCCCC
Q 044013            9 YSKSSSDDETDAGTGRSYECVFCKRGFTTAQALGGHMNIHRKDRAKN   55 (153)
Q Consensus         9 ~~~~~~h~~~~~~gekp~~C~~Cgk~F~~~~~L~~H~r~H~gekp~~   55 (153)
                      ...|..|++.+++ ++||.|.+|++.|.....|..|+++|++++||.
T Consensus         9 ~~~l~~h~~~H~~-~k~~~C~~C~k~f~~~~~L~~H~~~H~~~kp~~   54 (54)
T 1yui_A            9 PPGTEKPRSRSQS-EQPATCPICYAVIRQSRNLRRHLELRHFAKPGV   54 (54)
T ss_dssp             SSCCCCCHHHHTS-SCCEECTTTCCEESSHHHHHHHHHHHTTTSCCC
T ss_pred             CcchhhHHHhcCC-CCCccCCCCCcccCCHHHHHHHHHHhccCCCCC
Confidence            3557888888876 899999999999999999999999999999984

>2em7_A Zinc finger protein 224; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=99.11  E-value=7.9e-12  Score=71.24  Aligned_cols=45  Identities=13%  Similarity=0.073  Sum_probs=39.5

Q ss_pred             HHHHhhcCCCCCCCCCCCCCCCCCCccCCCCChhhhccccccCCCCCCCCCCCC
Q 044013           43 GHMNIHRKDRAKNRPPSSSSISDKLTFFPSPSTWDDHQRSVHTNNNNHSNYDSY   96 (153)
Q Consensus        43 ~H~r~H~gekp~~C~~c~~~~Cgk~~~F~~~~~L~~H~~~~Ht~~kp~~~~~~~   96 (153)
                      .|+++|++++||.|+.|++.       |.....|..|++ +|++++|| .|..|
T Consensus         2 ~H~~~H~~~k~~~C~~C~k~-------f~~~~~L~~H~~-~H~~~k~~-~C~~C   46 (46)
T 2em7_A            2 SSGSSGTGEKPYKCEECGKG-------FICRRDLYTHHM-VHTGEKPS-GPSSG   46 (46)
T ss_dssp             CCCCSSSCCCSEECSSSCCE-------ESCHHHHHHHGG-GGTTCCCS-STTCC
T ss_pred             CCCCCCCCCcCccCCCccch-------hCCHHHHHHHHH-HhCCCCCC-CCCCC
Confidence            37889999999999966655       999999999999 99999999 67665

>2eq0_A Zinc finger protein 347; C2H2, zinc finger domain, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.10  E-value=8.1e-12  Score=71.21  Aligned_cols=45  Identities=16%  Similarity=0.106  Sum_probs=39.6

Q ss_pred             HHHHhhcCCCCCCCCCCCCCCCCCCccCCCCChhhhccccccCCCCCCCCCCCC
Q 044013           43 GHMNIHRKDRAKNRPPSSSSISDKLTFFPSPSTWDDHQRSVHTNNNNHSNYDSY   96 (153)
Q Consensus        43 ~H~r~H~gekp~~C~~c~~~~Cgk~~~F~~~~~L~~H~~~~Ht~~kp~~~~~~~   96 (153)
                      .|+++|++++||.|+.|++.       |.....|..|++ +|++++|| .|..|
T Consensus         2 ~H~~~H~~~k~~~C~~C~k~-------F~~~~~L~~H~~-~H~~~k~~-~C~~c   46 (46)
T 2eq0_A            2 SSGSSGTGEKPYKCHECGKV-------FRRNSHLARHQL-IHTGEKPS-GPSSG   46 (46)
T ss_dssp             CCCCCTTCCCCEECTTTCCE-------ESSHHHHHHHHT-TTCCCCCS-CCSCC
T ss_pred             CCCcCCCCCCCeECCCCCch-------hCCHHHHHHHHH-HcCCCCCC-CCCCC
Confidence            47889999999999966666       999999999999 99999999 67655

>2em9_A Zinc finger protein 224; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 PDB: 2yrh_A

Probab=99.10  E-value=8.1e-12  Score=71.11  Aligned_cols=45  Identities=22%  Similarity=0.164  Sum_probs=39.7

Q ss_pred             HHHHhhcCCCCCCCCCCCCCCCCCCccCCCCChhhhccccccCCCCCCCCCCCC
Q 044013           43 GHMNIHRKDRAKNRPPSSSSISDKLTFFPSPSTWDDHQRSVHTNNNNHSNYDSY   96 (153)
Q Consensus        43 ~H~r~H~gekp~~C~~c~~~~Cgk~~~F~~~~~L~~H~~~~Ht~~kp~~~~~~~   96 (153)
                      .|+++|++++||.|+.|++.       |.....|..|++ +|++++|| .|..|
T Consensus         2 ~H~~~H~~~k~~~C~~C~k~-------f~~~~~L~~H~~-~H~~~~~~-~C~~C   46 (46)
T 2em9_A            2 SSGSSGTGEKPYNCKECGKS-------FRWASCLLKHQR-VHSGEKPS-GPSSG   46 (46)
T ss_dssp             CSCCSCCCCCSEECSSSCCE-------ESSHHHHHHHGG-GGTSCCCC-STTCC
T ss_pred             CCCCCCCCCcCeECCccccc-------cCChHHHHHHHH-HhCCCCCC-CCCCC
Confidence            47889999999999966666       999999999999 99999999 67665

>2em5_A ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=99.10  E-value=4e-12  Score=72.59  Aligned_cols=45  Identities=18%  Similarity=0.202  Sum_probs=39.7

Q ss_pred             HHHHhhcCCCCCCCCCCCCCCCCCCccCCCCChhhhccccccCCCCCCCCCCCC
Q 044013           43 GHMNIHRKDRAKNRPPSSSSISDKLTFFPSPSTWDDHQRSVHTNNNNHSNYDSY   96 (153)
Q Consensus        43 ~H~r~H~gekp~~C~~c~~~~Cgk~~~F~~~~~L~~H~~~~Ht~~kp~~~~~~~   96 (153)
                      +|+++|++++||.|+.|++.       |.....|..|++ +|++++|| .|..|
T Consensus         2 ~H~~~H~~~~~~~C~~C~k~-------f~~~~~L~~H~~-~H~~~~~~-~C~~C   46 (46)
T 2em5_A            2 SSGSSGSSTKSHQCHECGRG-------FTLKSHLNQHQR-IHTGEKPS-GPSSG   46 (46)
T ss_dssp             CCCCCCCCSCSEECSSSCCE-------ESSHHHHHHHHT-TTSCSCCS-SCCCC
T ss_pred             CCcCCCCCCCCeECCcCCCc-------cCCHHHHHHHHH-HhCCCCCC-CCCCC
Confidence            48889999999999966655       999999999999 99999999 67665

>2ep2_A Zinc finger protein 484; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.10  E-value=7.9e-12  Score=71.26  Aligned_cols=45  Identities=18%  Similarity=0.153  Sum_probs=39.6

Q ss_pred             HHHHhhcCCCCCCCCCCCCCCCCCCccCCCCChhhhccccccCCCCCCCCCCCC
Q 044013           43 GHMNIHRKDRAKNRPPSSSSISDKLTFFPSPSTWDDHQRSVHTNNNNHSNYDSY   96 (153)
Q Consensus        43 ~H~r~H~gekp~~C~~c~~~~Cgk~~~F~~~~~L~~H~~~~Ht~~kp~~~~~~~   96 (153)
                      .|+++|++++||.|+.|++.       |.....|..|++ +|++++|| .|..|
T Consensus         2 ~H~~~H~~~k~~~C~~C~k~-------f~~~~~L~~H~~-~H~~~k~~-~C~~c   46 (46)
T 2ep2_A            2 SSGSSGTGEKPYECSICGKS-------FTKKSQLHVHQQ-IHTGEKPS-GPSSG   46 (46)
T ss_dssp             CSSSCSSCCCSEECSSSCCE-------ESSHHHHHHHHH-TTSSCCSC-CSCCC
T ss_pred             CCCCCCCCCcCcCCCCCCcc-------cCCHHHHHHHHH-HhCCCCCC-CCCCC
Confidence            47889999999999966666       999999999999 99999999 66654

>2en8_A Zinc finger protein 224; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=99.10  E-value=7.7e-12  Score=71.20  Aligned_cols=45  Identities=18%  Similarity=0.110  Sum_probs=39.7

Q ss_pred             HHHHhhcCCCCCCCCCCCCCCCCCCccCCCCChhhhccccccCCCCCCCCCCCC
Q 044013           43 GHMNIHRKDRAKNRPPSSSSISDKLTFFPSPSTWDDHQRSVHTNNNNHSNYDSY   96 (153)
Q Consensus        43 ~H~r~H~gekp~~C~~c~~~~Cgk~~~F~~~~~L~~H~~~~Ht~~kp~~~~~~~   96 (153)
                      +|+++|++++||.|+.|++.       |.....|..|++ +|++++|| .|..|
T Consensus         2 ~H~~~H~~~~~~~C~~C~k~-------f~~~~~L~~H~~-~H~~~k~~-~C~~C   46 (46)
T 2en8_A            2 SSGSSGSGEKSHTCDECGKN-------FCYISALRIHQR-VHMGEKCS-GPSSG   46 (46)
T ss_dssp             CCCCCCCCCSSEECTTTCCE-------ESSHHHHHHHHT-TTCCSCSS-CCSCC
T ss_pred             CccccCCCCCCeECCCcCcc-------cCCHHHHHHHHH-HhCCCCCC-CCCCC
Confidence            47889999999999966666       999999999999 99999999 67665

>2ema_A Zinc finger protein 347; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 PDB: 2emc_A

Probab=99.10  E-value=7.2e-12  Score=71.41  Aligned_cols=45  Identities=16%  Similarity=0.163  Sum_probs=39.5

Q ss_pred             HHHHhhcCCCCCCCCCCCCCCCCCCccCCCCChhhhccccccCCCCCCCCCCCC
Q 044013           43 GHMNIHRKDRAKNRPPSSSSISDKLTFFPSPSTWDDHQRSVHTNNNNHSNYDSY   96 (153)
Q Consensus        43 ~H~r~H~gekp~~C~~c~~~~Cgk~~~F~~~~~L~~H~~~~Ht~~kp~~~~~~~   96 (153)
                      .|+++|++++||.|+.|++.       |.....|..|++ +|++++|| .|..|
T Consensus         2 ~H~~~H~~~k~~~C~~C~k~-------f~~~~~L~~H~~-~H~~~k~~-~C~~c   46 (46)
T 2ema_A            2 SSGSSGTGEKRYKCNECGKV-------FSRNSQLSQHQK-IHTGEKPS-GPSSG   46 (46)
T ss_dssp             CSCSSCTTSCCEECSSSCCE-------ESSHHHHHHHHT-GGGCCCCC-SSSCC
T ss_pred             CCccCCCCCcCcCCCCCcch-------hCCHHHHHHHHH-hcCCCCCC-CCCCC
Confidence            47889999999999966655       999999999999 99999999 66655

>2epw_A Zinc finger protein 268; C2H2, zinc finger domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.10  E-value=8.3e-12  Score=71.07  Aligned_cols=45  Identities=16%  Similarity=0.093  Sum_probs=39.6

Q ss_pred             HHHHhhcCCCCCCCCCCCCCCCCCCccCCCCChhhhccccccCCCCCCCCCCCC
Q 044013           43 GHMNIHRKDRAKNRPPSSSSISDKLTFFPSPSTWDDHQRSVHTNNNNHSNYDSY   96 (153)
Q Consensus        43 ~H~r~H~gekp~~C~~c~~~~Cgk~~~F~~~~~L~~H~~~~Ht~~kp~~~~~~~   96 (153)
                      .|+++|++++||.|+.|++.       |.+...|..|++ +|++++|| .|..|
T Consensus         2 ~H~~~H~~~k~~~C~~C~k~-------F~~~~~L~~H~~-~H~~~k~~-~C~~C   46 (46)
T 2epw_A            2 SSGSSGTGEKPCKCTECGKA-------FCWKSQLIMHQR-THVDDKHS-GPSSG   46 (46)
T ss_dssp             CCCCCCCCCCSEECSSSCCE-------ESSSHHHHHHHH-HCCSCCCS-CCCCC
T ss_pred             cCcccCCCCCCeeCCCCCCc-------cCCHHHHHHHHH-HhCCCCCC-CCCCC
Confidence            47889999999999966666       999999999999 99999999 67665

>2ytj_A Zinc finger protein 484; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.10  E-value=8.3e-12  Score=71.15  Aligned_cols=45  Identities=16%  Similarity=0.124  Sum_probs=39.5

Q ss_pred             HHHHhhcCCCCCCCCCCCCCCCCCCccCCCCChhhhccccccCCCCCCCCCCCC
Q 044013           43 GHMNIHRKDRAKNRPPSSSSISDKLTFFPSPSTWDDHQRSVHTNNNNHSNYDSY   96 (153)
Q Consensus        43 ~H~r~H~gekp~~C~~c~~~~Cgk~~~F~~~~~L~~H~~~~Ht~~kp~~~~~~~   96 (153)
                      .|+++|++++||.|+.|++.       |.....|..|++ +|++++|| .|..|
T Consensus         2 ~H~~~H~~~k~~~C~~C~k~-------f~~~~~L~~H~~-~H~~~k~~-~C~~c   46 (46)
T 2ytj_A            2 SSGSSGTGEKPYICAECGKA-------FTIRSNLIKHQK-IHTKQKPS-GPSSG   46 (46)
T ss_dssp             CSSCTTSSCCSEECSSSCCE-------ESSHHHHHHHHH-HTSCCCCS-SCSCC
T ss_pred             CcccCCCCCcCeECCCCChh-------hCCHHHHHHHHH-HcCCCCCC-CCCCC
Confidence            48899999999999966666       999999999999 99999999 56654

>2emx_A Zinc finger protein 268; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=99.10  E-value=5.2e-12  Score=71.37  Aligned_cols=44  Identities=16%  Similarity=0.059  Sum_probs=38.8

Q ss_pred             HHHhhcCCCCCCCCCCCCCCCCCCccCCCCChhhhccccccCCCCCCCCCCCC
Q 044013           44 HMNIHRKDRAKNRPPSSSSISDKLTFFPSPSTWDDHQRSVHTNNNNHSNYDSY   96 (153)
Q Consensus        44 H~r~H~gekp~~C~~c~~~~Cgk~~~F~~~~~L~~H~~~~Ht~~kp~~~~~~~   96 (153)
                      |+++|++++||.|..|++.       |.....|..|++ +|++++|| .|..|
T Consensus         1 H~~~H~~~k~~~C~~C~k~-------f~~~~~L~~H~~-~H~~~~~~-~C~~C   44 (44)
T 2emx_A            1 GSSGSSGEKPFGCSCCEKA-------FSSKSYLLVHQQ-THAEEKPS-GPSSG   44 (44)
T ss_dssp             CCCCCSSCCCEECSSSSCE-------ESSHHHHHHHHH-HHTSSCSC-SCCCC
T ss_pred             CCCCcCCCcCccCCCCCcc-------cCCHHHHHHHHH-HhCCCCCC-CCCCC
Confidence            6789999999999966666       999999999999 99999999 67665

>1x3c_A Zinc finger protein 292; DNA binding, nuclear protein, C2H2-type zinc finger, KIAA0530, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: g.37.1.1

Probab=99.09  E-value=7.5e-11  Score=74.11  Aligned_cols=40  Identities=33%  Similarity=0.465  Sum_probs=33.9

Q ss_pred             ccCCCCcceeccc--cccccCChhHHHHHH-HhhcCCCCCCCC
Q 044013           18 TDAGTGRSYECVF--CKRGFTTAQALGGHM-NIHRKDRAKNRP   57 (153)
Q Consensus        18 ~~~~gekp~~C~~--Cgk~F~~~~~L~~H~-r~H~gekp~~C~   57 (153)
                      ....|+|||+|.+  |+++|...++|..|+ ++|+++|||.|.
T Consensus        20 ~~~sGEKPYkC~~~~CgKaFsr~s~L~~H~rriHTgEKP~~~~   62 (73)
T 1x3c_A           20 TRYSPYRPYRCVHQGCFAAFTIQQNLILHYQAVHKSDLPAFSA   62 (73)
T ss_dssp             SSSCSSCSCBCCSTTCCCBCSSHHHHHHHHHHHSSSCCCCCCC
T ss_pred             ccccCCCCeECCCCCcChhHcCHHHHHHHhhhhCCCCCCcccc
Confidence            4456789999975  999999999999997 689999999875

>2emm_A ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.09  E-value=6.3e-12  Score=71.59  Aligned_cols=45  Identities=20%  Similarity=0.192  Sum_probs=39.7

Q ss_pred             HHHHhhcCCCCCCCCCCCCCCCCCCccCCCCChhhhccccccCCCCCCCCCCCC
Q 044013           43 GHMNIHRKDRAKNRPPSSSSISDKLTFFPSPSTWDDHQRSVHTNNNNHSNYDSY   96 (153)
Q Consensus        43 ~H~r~H~gekp~~C~~c~~~~Cgk~~~F~~~~~L~~H~~~~Ht~~kp~~~~~~~   96 (153)
                      .|+++|++++||.|+.|++.       |.....|..|++ +|++++|| .|..|
T Consensus         2 ~H~~~H~~~k~~~C~~C~k~-------f~~~~~L~~H~~-~H~~~k~~-~C~~C   46 (46)
T 2emm_A            2 SSGSSGTGERPHKCNECGKS-------FIQSAHLIQHQR-IHTGEKPS-GPSSG   46 (46)
T ss_dssp             CCCSCSSCCCSEECSSSCCE-------ESSHHHHHHHHH-HHSCCCTT-SSSCC
T ss_pred             CCcCCcCCCCCeeCCCCChh-------hCCHHHHHHHHH-HhCCCCCC-CCCCC
Confidence            47889999999999966666       999999999999 99999999 67665

>2yu8_A Zinc finger protein 347; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.09  E-value=6.1e-12  Score=71.72  Aligned_cols=45  Identities=18%  Similarity=0.158  Sum_probs=39.6

Q ss_pred             HHHHhhcCCCCCCCCCCCCCCCCCCccCCCCChhhhccccccCCCCCCCCCCCC
Q 044013           43 GHMNIHRKDRAKNRPPSSSSISDKLTFFPSPSTWDDHQRSVHTNNNNHSNYDSY   96 (153)
Q Consensus        43 ~H~r~H~gekp~~C~~c~~~~Cgk~~~F~~~~~L~~H~~~~Ht~~kp~~~~~~~   96 (153)
                      .|+++|++++||.|+.|++.       |.....|..|++ +|++++|| .|..|
T Consensus         2 ~H~~~H~~~k~~~C~~C~k~-------f~~~~~L~~H~~-~H~~~~~~-~C~~C   46 (46)
T 2yu8_A            2 SSGSSGTGEKPYKCNECGKV-------FTQNSHLARHRR-VHTGGKPS-GPSSG   46 (46)
T ss_dssp             CCCCCCCCCSSEECSSSCCE-------ESSSHHHHHHTH-HHHSCCCS-CSCCC
T ss_pred             CcCcCCCCCCCeECCcCCch-------hCCHHHHHHHHH-hcCCCCCC-CCCCC
Confidence            47889999999999966655       999999999999 99999999 67665

>2ytm_A Zinc finger protein 28 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.09  E-value=9.1e-12  Score=71.15  Aligned_cols=45  Identities=18%  Similarity=0.170  Sum_probs=39.4

Q ss_pred             HHHHhhcCCCCCCCCCCCCCCCCCCccCCCCChhhhccccccCCCCCCCCCCCC
Q 044013           43 GHMNIHRKDRAKNRPPSSSSISDKLTFFPSPSTWDDHQRSVHTNNNNHSNYDSY   96 (153)
Q Consensus        43 ~H~r~H~gekp~~C~~c~~~~Cgk~~~F~~~~~L~~H~~~~Ht~~kp~~~~~~~   96 (153)
                      .|+++|++++||.|+.|++.       |.....|..|++ +|++++|| .|..|
T Consensus         2 ~h~~~h~~~k~~~C~~C~k~-------f~~~~~L~~H~~-~H~~~~~~-~C~~C   46 (46)
T 2ytm_A            2 SSGSSGTGEKPYKCMECGKA-------FGDNSSCTQHQR-LHTGQRPS-GPSSG   46 (46)
T ss_dssp             CSCCCCSSCCSSSBTTTTBC-------CSSHHHHHHHHH-HHHSCCCC-CCCCC
T ss_pred             CCCcCCCCCCCcCCCCCCch-------hCCHHHHHHHHH-HcCCCCCC-CCCCC
Confidence            37889999999999966555       999999999999 99999999 67665

>1njq_A Superman protein; zinc-finger, peptide-zinc complex, beta-BETA-ALFA motif, metal binding protein; NMR {Synthetic} SCOP: g.37.1.3 PDB: 2l1o_A

Probab=99.08  E-value=9e-11  Score=64.49  Aligned_cols=36  Identities=67%  Similarity=1.172  Sum_probs=33.3

Q ss_pred             CCcceeccccccccCChhHHHHHHHhhcCCCCCCCC
Q 044013           22 TGRSYECVFCKRGFTTAQALGGHMNIHRKDRAKNRP   57 (153)
Q Consensus        22 gekp~~C~~Cgk~F~~~~~L~~H~r~H~gekp~~C~   57 (153)
                      +++||.|.+|++.|.....|..|+++|++++||.+.
T Consensus         3 ~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~k~~~~~   38 (39)
T 1njq_A            3 PPRSYTCSFCKREFRSAQALGGHMNVHRRDRARLRL   38 (39)
T ss_dssp             CSSSEECTTTCCEESSHHHHHHHHHTTCCSCTTTTC
T ss_pred             CCCceECCCCCcccCCHHHHHHHHHHcCCCccceec
Confidence            588999999999999999999999999999999764

>2ytd_A Zinc finger protein 473; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.08  E-value=7.1e-12  Score=71.44  Aligned_cols=45  Identities=13%  Similarity=0.186  Sum_probs=39.8

Q ss_pred             HHHHhhcCCCCCCCCCCCCCCCCCCccCCCCChhhhccccccCCCCCCCCCCCC
Q 044013           43 GHMNIHRKDRAKNRPPSSSSISDKLTFFPSPSTWDDHQRSVHTNNNNHSNYDSY   96 (153)
Q Consensus        43 ~H~r~H~gekp~~C~~c~~~~Cgk~~~F~~~~~L~~H~~~~Ht~~kp~~~~~~~   96 (153)
                      .|+++|++++||.|+.|++.       |.....|..|++ +|++++|| .|..|
T Consensus         2 ~H~~~H~~~k~~~C~~C~k~-------f~~~~~L~~H~~-~H~~~~~~-~C~~C   46 (46)
T 2ytd_A            2 SSGSSGSGEKPYKCSECGKA-------FHRHTHLNEHRR-IHTGYRPS-GPSSG   46 (46)
T ss_dssp             CCCCCSCCCCSEECSSSCCE-------ESSHHHHHHHHH-HHTCCCSS-CSSCC
T ss_pred             CCccccCCCcCeECCCCCCe-------eCChHHHHHHHH-HcCCCCCC-CCCCC
Confidence            47889999999999966666       999999999999 99999999 67665

>2emy_A Zinc finger protein 268; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.08  E-value=7.2e-12  Score=71.41  Aligned_cols=45  Identities=13%  Similarity=0.082  Sum_probs=39.6

Q ss_pred             HHHHhhcCCCCCCCCCCCCCCCCCCccCCCCChhhhccccccCCCCCCCCCCCC
Q 044013           43 GHMNIHRKDRAKNRPPSSSSISDKLTFFPSPSTWDDHQRSVHTNNNNHSNYDSY   96 (153)
Q Consensus        43 ~H~r~H~gekp~~C~~c~~~~Cgk~~~F~~~~~L~~H~~~~Ht~~kp~~~~~~~   96 (153)
                      .|+++|++++||.|+.|++.       |.....|..|++ +|++++|| .|..|
T Consensus         2 ~H~~~H~~~k~~~C~~C~k~-------F~~~~~L~~H~~-~H~~~k~~-~C~~C   46 (46)
T 2emy_A            2 SSGSSGTGENPYECHECGKA-------FSRKYQLISHQR-THAGEKPS-GPSSG   46 (46)
T ss_dssp             CCCCCCCSSCCEECSSSCCE-------ESSHHHHHHHHH-HHTTSCCS-CSSCC
T ss_pred             CCCCCCCCCcCcCCCCCCcc-------cCcHHHHHHHHH-HcCCCCCC-CCCCC
Confidence            47889999999999966665       999999999999 99999999 67665

>2d9k_A FLN29 gene product; zinc finger, ZF-TRAF, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=99.08  E-value=3.2e-11  Score=76.70  Aligned_cols=67  Identities=19%  Similarity=0.163  Sum_probs=58.3

Q ss_pred             CCCCCcccccCCCCcceeccccccccCChhHHHHHHHhhcCCCCCCCCCCCCCCCCCCccCCCCChhhhccccccCCCC
Q 044013           10 SKSSSDDETDAGTGRSYECVFCKRGFTTAQALGGHMNIHRKDRAKNRPPSSSSISDKLTFFPSPSTWDDHQRSVHTNNN   88 (153)
Q Consensus        10 ~~~~~h~~~~~~gekp~~C~~Cgk~F~~~~~L~~H~r~H~gekp~~C~~c~~~~Cgk~~~F~~~~~L~~H~~~~Ht~~k   88 (153)
                      ..|..|++.+.+ ++|+.|.+|++.|. ...|..|+ .|.+++|+.|+.|++.       |.. ..|..|++ +|++++
T Consensus         3 ~~L~~H~~~~c~-~r~~~C~~C~~~~~-~~~L~~H~-~~c~~~~~~C~~C~~~-------~~~-~~l~~H~~-~c~~~~   69 (75)
T 2d9k_A            3 SGSSGHEETECP-LRLAVCQHCDLELS-ILKLKEHE-DYCGARTELCGNCGRN-------VLV-KDLKTHPE-VCGREG   69 (75)
T ss_dssp             CCCSCCCCCCCC-CCCEECSSSCCEEC-HHHHHHHH-HHHHHCEEECSSSCCE-------EET-TGGGTHHH-HBTTBS
T ss_pred             hHHHhhCcccCC-CcccCCcccChHhh-HHHHHHHH-hHcCCCceEcccCCCc-------CcH-HHHHHHHH-HccCCc
Confidence            568889888777 89999999999995 89999999 9999999999966555       884 88999999 888864

>2ep3_A Zinc finger protein 484; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.07  E-value=1.1e-11  Score=70.60  Aligned_cols=44  Identities=16%  Similarity=0.188  Sum_probs=38.7

Q ss_pred             HHHHhhcCCCCCCCCCCCCCCCCCCccCCCCChhhhccccccCCCCCCCCCCC
Q 044013           43 GHMNIHRKDRAKNRPPSSSSISDKLTFFPSPSTWDDHQRSVHTNNNNHSNYDS   95 (153)
Q Consensus        43 ~H~r~H~gekp~~C~~c~~~~Cgk~~~F~~~~~L~~H~~~~Ht~~kp~~~~~~   95 (153)
                      .|+++|++++||.|..|++.       |.....|..|++ +|++++|| .|..
T Consensus         2 ~H~~~H~~~k~~~C~~C~k~-------f~~~~~L~~H~~-~H~~~~~~-~C~~   45 (46)
T 2ep3_A            2 SSGSSGTGEKPYRCAECGKA-------FTDRSNLFTHQK-IHTGEKPS-GPSS   45 (46)
T ss_dssp             CCCSSSSCCCSEECSSSCCE-------ESSHHHHHHHHT-TTTTSCCC-CTTC
T ss_pred             CCCCCCCCCCCeECCCCCch-------hCCHHHHHHHHH-HcCCCCCC-CCCC
Confidence            47889999999999966665       999999999999 99999999 5654

>2en1_A Zinc finger protein 224; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.07  E-value=1e-11  Score=70.78  Aligned_cols=45  Identities=20%  Similarity=0.184  Sum_probs=39.7

Q ss_pred             HHHHhhcCCCCCCCCCCCCCCCCCCccCCCCChhhhccccccCCCCCCCCCCCC
Q 044013           43 GHMNIHRKDRAKNRPPSSSSISDKLTFFPSPSTWDDHQRSVHTNNNNHSNYDSY   96 (153)
Q Consensus        43 ~H~r~H~gekp~~C~~c~~~~Cgk~~~F~~~~~L~~H~~~~Ht~~kp~~~~~~~   96 (153)
                      .|+++|++++||.|+.|++.       |.....|..|++ +|++++|| .|..|
T Consensus         2 ~H~~~H~~~~~~~C~~C~k~-------f~~~~~L~~H~~-~H~~~~~~-~C~~C   46 (46)
T 2en1_A            2 SSGSSGSGEKPFKCEECGKR-------FTQNSQLHSHQR-VHTGEKPS-GPSSG   46 (46)
T ss_dssp             CSTTCCCCCCSEEETTTTEE-------ESSHHHHHHHGG-GGSCCCCS-CCCCC
T ss_pred             CcccCCCCCCCeeCCCCCcc-------cCCHHHHHHHHH-HcCCCCCC-CCCCC
Confidence            48899999999999966555       999999999999 99999999 67665

>2ytk_A Zinc finger protein 347; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.07  E-value=7.7e-12  Score=71.30  Aligned_cols=45  Identities=16%  Similarity=0.149  Sum_probs=39.6

Q ss_pred             HHHHhhcCCCCCCCCCCCCCCCCCCccCCCCChhhhccccccCCCCCCCCCCCC
Q 044013           43 GHMNIHRKDRAKNRPPSSSSISDKLTFFPSPSTWDDHQRSVHTNNNNHSNYDSY   96 (153)
Q Consensus        43 ~H~r~H~gekp~~C~~c~~~~Cgk~~~F~~~~~L~~H~~~~Ht~~kp~~~~~~~   96 (153)
                      .|+++|++++||.|+.|++.       |.+...|..|++ +|++++|| .|..|
T Consensus         2 ~H~~~H~~~~~~~C~~C~k~-------f~~~~~L~~H~~-~H~~~~~~-~C~~c   46 (46)
T 2ytk_A            2 SSGSSGSGEKPYKCNECGKV-------FTQNSHLTNHWR-IHTGEKPS-GPSSG   46 (46)
T ss_dssp             CCCCCSSSSCSEECSSSCCE-------ESSHHHHHHHHH-HHSSSSCS-SCCCC
T ss_pred             CCcccCCCCCCEeCCcCCCc-------cCCHHHHHHHHH-HHCCCCCC-CCCCC
Confidence            47889999999999966655       999999999999 99999999 67665

>2ytb_A Zinc finger protein 32; zinc-finger domain, C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.07  E-value=2.9e-11  Score=67.36  Aligned_cols=39  Identities=15%  Similarity=0.173  Sum_probs=36.0

Q ss_pred             HHHhhcCCCCCCCCCCCCCCCCCCccCCCCChhhhccccccCCCCCC
Q 044013           44 HMNIHRKDRAKNRPPSSSSISDKLTFFPSPSTWDDHQRSVHTNNNNH   90 (153)
Q Consensus        44 H~r~H~gekp~~C~~c~~~~Cgk~~~F~~~~~L~~H~~~~Ht~~kp~   90 (153)
                      |+++|++++||.|+.|++.       |.....|..|++ +|++++||
T Consensus         2 H~~~H~~~k~~~C~~C~k~-------f~~~~~L~~H~~-~H~~~~~~   40 (42)
T 2ytb_A            2 SSGSSGGEKPYRCDQCGKA-------FSQKGSLIVHIR-VHTGSGPS   40 (42)
T ss_dssp             CCCCCCSCCSBCCTTTTCC-------BSSHHHHHTTGG-GTSCCSCC
T ss_pred             CccccCCCCCeeCCCccch-------hCCHHHHHHHHH-HhCCCCCC
Confidence            7889999999999966666       999999999999 99999999

>2enc_A Zinc finger protein 224; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=99.07  E-value=1e-11  Score=70.78  Aligned_cols=45  Identities=16%  Similarity=0.109  Sum_probs=39.5

Q ss_pred             HHHHhhcCCCCCCCCCCCCCCCCCCccCCCCChhhhccccccCCCCCCCCCCCC
Q 044013           43 GHMNIHRKDRAKNRPPSSSSISDKLTFFPSPSTWDDHQRSVHTNNNNHSNYDSY   96 (153)
Q Consensus        43 ~H~r~H~gekp~~C~~c~~~~Cgk~~~F~~~~~L~~H~~~~Ht~~kp~~~~~~~   96 (153)
                      .|+++|++++||.|..|++.       |.....|..|++ +|++++|| .|.+|
T Consensus         2 ~h~~~H~~~k~~~C~~C~k~-------f~~~~~L~~H~~-~H~~~~~~-~C~~C   46 (46)
T 2enc_A            2 SSGSSGSGEKPFKCEECGKG-------FYTNSQCYSHQR-SHSGEKPS-GPSSG   46 (46)
T ss_dssp             CCSSCCCCCCSEECSSSCCE-------ESSHHHHHHHHH-HSCCSSCC-SSCCC
T ss_pred             CCCCCCCCCCCcCCCCCCCc-------CCChHHHHHHHH-HhCCCCCC-CCCCC
Confidence            37889999999999966655       999999999999 99999999 67665

>2el6_A Zinc finger protein 268; alternative splicing, DNA-binding, metal-binding, nuclear protein, repeat, transcription, transcription regulation; NMR {Homo sapiens}

Probab=99.07  E-value=1.2e-11  Score=70.51  Aligned_cols=45  Identities=18%  Similarity=0.057  Sum_probs=39.4

Q ss_pred             HHHHhhcCCCCCCCCCCCCCCCCCCccCCCCChhhhccccccCCCCCCCCCCCC
Q 044013           43 GHMNIHRKDRAKNRPPSSSSISDKLTFFPSPSTWDDHQRSVHTNNNNHSNYDSY   96 (153)
Q Consensus        43 ~H~r~H~gekp~~C~~c~~~~Cgk~~~F~~~~~L~~H~~~~Ht~~kp~~~~~~~   96 (153)
                      .|+++|++++||.|+.|++.       |.....|..|++ +|++++|| .|..|
T Consensus         2 ~h~~~h~~~k~~~C~~C~k~-------f~~~~~L~~H~~-~H~~~~~~-~C~~C   46 (46)
T 2el6_A            2 SSGSSGAGVNPYKCSQCEKS-------FSGKLRLLVHQR-MHTREKPS-GPSSG   46 (46)
T ss_dssp             CSCCSSCCCCSEECSSSSCE-------ESSHHHHHHHHG-GGCCSSCC-SCCCC
T ss_pred             CCCCCCCCCCCeECCCCCcc-------cCCHHHHHHHHH-HcCCCCCC-CCCCC
Confidence            37889999999999966666       999999999999 99999999 67665

>2ctd_A Zinc finger protein 512; zinc binding, two ZF-C2H2 domain, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1

Probab=99.07  E-value=3.3e-11  Score=80.01  Aligned_cols=67  Identities=4%  Similarity=-0.035  Sum_probs=57.8

Q ss_pred             cccCChhHHHHHHHhhcCCCCCCCCCCCCCCCCCCccC-CCCChhhhccccccCCCCCCCCCCCCccccccCCcccchh
Q 044013           33 RGFTTAQALGGHMNIHRKDRAKNRPPSSSSISDKLTFF-PSPSTWDDHQRSVHTNNNNHSNYDSYGQNYHQHLNMIGDE  110 (153)
Q Consensus        33 k~F~~~~~L~~H~r~H~gekp~~C~~c~~~~Cgk~~~F-~~~~~L~~H~~~~Ht~~kp~~~~~~~~~~f~~~~~~~~~~  110 (153)
                      ..|.....|..|+++|++++||.|+.|++.       | .....|..|++ +| +++|| .|..|++.|.+... |..+
T Consensus        14 ~~~~~~~~~~~~~~~~~~~~~~~C~~C~k~-------F~~~~~~L~~H~~-~h-~~k~~-~C~~Cgk~F~~~~~-L~~H   81 (96)
T 2ctd_A           14 PVYAAGSLEEQWYLEIVDKGSVSCPTCQAV-------GRKTIEGLKKHME-NC-KQEMF-TCHHCGKQLRSLAG-MKYH   81 (96)
T ss_dssp             CSSCTTCHHHHHHHHHHHTSCEECTTTCSC-------EESSHHHHHHHHH-HH-CCCCC-CCSSSCCCCSSHHH-HHHH
T ss_pred             CCCCCchHHHHHHHHhcCCCCcCCCCCCCC-------cccCHHHHHHHHH-HH-CCCCe-ECCCCCCeeCCHHH-HHHH
Confidence            367788899999999999999999966655       9 99999999999 99 99999 89999999966555 5555

>2eoo_A ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.07  E-value=6.5e-12  Score=71.69  Aligned_cols=45  Identities=13%  Similarity=0.068  Sum_probs=39.7

Q ss_pred             HHHHhhcCCCCCCCCCCCCCCCCCCccCCCCChhhhccccccCCCCCCCCCCCC
Q 044013           43 GHMNIHRKDRAKNRPPSSSSISDKLTFFPSPSTWDDHQRSVHTNNNNHSNYDSY   96 (153)
Q Consensus        43 ~H~r~H~gekp~~C~~c~~~~Cgk~~~F~~~~~L~~H~~~~Ht~~kp~~~~~~~   96 (153)
                      .|+++|++++||.|+.|++.       |...+.|..|++ +|++++|| .|..|
T Consensus         2 ~H~~~H~~~k~~~C~~C~k~-------F~~~~~L~~H~~-~H~~~k~~-~C~~C   46 (46)
T 2eoo_A            2 SSGSSGSGERPYGCNECGKN-------FGRHSHLIEHLK-RHFREKSS-GPSSG   46 (46)
T ss_dssp             CCCCCCSCCCCEECSSSCCE-------ESSHHHHHHHHH-HHHSTTSS-CCSCC
T ss_pred             CCCCCCCCCCCEEccccCcc-------cCCHHHHHHHHH-HHcCCCCC-CCCCC
Confidence            48889999999999966655       999999999999 99999999 67665

>2eq2_A Zinc finger protein 347; C2H2, zinc finger domain, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.07  E-value=3.6e-11  Score=68.45  Aligned_cols=43  Identities=19%  Similarity=0.201  Sum_probs=37.8

Q ss_pred             HHHHhhcCCCCCCCCCCCCCCCCCCccCCCCChhhhccccccCCCCCCCCCC
Q 044013           43 GHMNIHRKDRAKNRPPSSSSISDKLTFFPSPSTWDDHQRSVHTNNNNHSNYD   94 (153)
Q Consensus        43 ~H~r~H~gekp~~C~~c~~~~Cgk~~~F~~~~~L~~H~~~~Ht~~kp~~~~~   94 (153)
                      .|+++|++++||.|+.|++.       |.....|..|++ +|++++|| .|.
T Consensus         2 ~H~~~H~~~k~~~C~~C~k~-------f~~~~~L~~H~~-~H~~~k~~-~C~   44 (46)
T 2eq2_A            2 SSGSSGTGGKPYQCNECGKA-------FSQTSKLARHQR-VHTGEKPS-GPS   44 (46)
T ss_dssp             CCCCSSSSSCSSSCCSSCCC-------CSSHHHHHHHGG-GGCCCCCC-CCC
T ss_pred             CcccccCCCCCeECCCCCcc-------cCCHHHHHHHHH-HcCCCCCC-CCC
Confidence            47889999999999966655       999999999999 99999999 453

>2emh_A Zinc finger protein 484; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.06  E-value=6.8e-12  Score=71.52  Aligned_cols=45  Identities=18%  Similarity=0.144  Sum_probs=39.6

Q ss_pred             HHHHhhcCCCCCCCCCCCCCCCCCCccCCCCChhhhccccccCCCCCCCCCCCC
Q 044013           43 GHMNIHRKDRAKNRPPSSSSISDKLTFFPSPSTWDDHQRSVHTNNNNHSNYDSY   96 (153)
Q Consensus        43 ~H~r~H~gekp~~C~~c~~~~Cgk~~~F~~~~~L~~H~~~~Ht~~kp~~~~~~~   96 (153)
                      .|+++|++++||.|..|++.       |.....|..|++ +|++++|| .|..|
T Consensus         2 ~H~~~H~~~k~~~C~~C~k~-------F~~~~~L~~H~~-~H~~~k~~-~C~~c   46 (46)
T 2emh_A            2 SSGSSGTGERPYICTVCGKA-------FTDRSNLIKHQK-IHTGEKPS-GPSSG   46 (46)
T ss_dssp             CCCCSCSCCCSEECTTTCCE-------ESSHHHHHHHHH-HHHCSSCS-SSCCC
T ss_pred             CCCCCCCCCCCcCCCCCCch-------hCCHHHHHHHHH-hcCCCCCC-CCCCC
Confidence            47889999999999966666       999999999999 99999999 67655

>2yso_A ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=99.06  E-value=1e-11  Score=70.74  Aligned_cols=45  Identities=13%  Similarity=0.109  Sum_probs=39.5

Q ss_pred             HHHHhhcCCCCCCCCCCCCCCCCCCccCCCCChhhhccccccCCCCCCCCCCCC
Q 044013           43 GHMNIHRKDRAKNRPPSSSSISDKLTFFPSPSTWDDHQRSVHTNNNNHSNYDSY   96 (153)
Q Consensus        43 ~H~r~H~gekp~~C~~c~~~~Cgk~~~F~~~~~L~~H~~~~Ht~~kp~~~~~~~   96 (153)
                      .|+++|++++||.|..|++.       |.....|..|++ +|++++|| .|..|
T Consensus         2 ~H~~~H~~~~~~~C~~C~k~-------f~~~~~L~~H~~-~H~~~k~~-~C~~C   46 (46)
T 2yso_A            2 SSGSSGSREKSHQCRECGEI-------FFQYVSLIEHQV-LHMGQKNS-GPSSG   46 (46)
T ss_dssp             CCSCCSSCCCCEECTTTCCE-------ESSHHHHHHHHH-HHSCCSCC-CTTCC
T ss_pred             CcccccCCCCCEEccccChh-------hCCHHHHHHHHH-HhCCCCCC-CCCCC
Confidence            37889999999999966666       999999999999 99999999 67665

>2emp_A Zinc finger protein 347; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.06  E-value=6.9e-12  Score=71.49  Aligned_cols=45  Identities=16%  Similarity=0.066  Sum_probs=39.6

Q ss_pred             HHHHhhcCCCCCCCCCCCCCCCCCCccCCCCChhhhccccccCCCCCCCCCCCC
Q 044013           43 GHMNIHRKDRAKNRPPSSSSISDKLTFFPSPSTWDDHQRSVHTNNNNHSNYDSY   96 (153)
Q Consensus        43 ~H~r~H~gekp~~C~~c~~~~Cgk~~~F~~~~~L~~H~~~~Ht~~kp~~~~~~~   96 (153)
                      .|+++|++++||.|..|++.       |.....|..|++ +|++++|| .|..|
T Consensus         2 ~H~~~H~~~k~~~C~~C~k~-------f~~~~~L~~H~~-~H~~~k~~-~C~~C   46 (46)
T 2emp_A            2 SSGSSGTGVKPYMCNECGKA-------FSVYSSLTTHQV-IHTGEKPS-GPSSG   46 (46)
T ss_dssp             CCCSCSSCCCSEECSSSCCE-------ESCHHHHHHHHH-HHHCCSCC-SCCCC
T ss_pred             CcccccCCCcCeECCCCCch-------hCCHHHHHHHHH-HcCCCCCC-CCCCC
Confidence            47889999999999966655       999999999999 99999999 67655

>2ysp_A Zinc finger protein 224; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.06  E-value=8.8e-12  Score=71.06  Aligned_cols=45  Identities=18%  Similarity=0.146  Sum_probs=39.6

Q ss_pred             HHHHhhcCCCCCCCCCCCCCCCCCCccCCCCChhhhccccccCCCCCCCCCCCC
Q 044013           43 GHMNIHRKDRAKNRPPSSSSISDKLTFFPSPSTWDDHQRSVHTNNNNHSNYDSY   96 (153)
Q Consensus        43 ~H~r~H~gekp~~C~~c~~~~Cgk~~~F~~~~~L~~H~~~~Ht~~kp~~~~~~~   96 (153)
                      .|+++|++++||.|+.|++.       |.....|..|++ +|++++|| .|..|
T Consensus         2 ~H~~~h~~~k~~~C~~C~k~-------f~~~~~L~~H~~-~H~~~~~~-~C~~C   46 (46)
T 2ysp_A            2 SSGSSGTGEKPYKCEKCGKG-------YNSKFNLDMHQK-VHTGERPS-GPSSG   46 (46)
T ss_dssp             CCCCCCSSCCSEEETTTTEE-------ESCHHHHHHHHT-TSCSCCSS-CCSCC
T ss_pred             CCCcCCCCCCCeECCCCCCc-------cCCHHHHHHHHH-hhCCCCCC-CCCCC
Confidence            37889999999999966655       999999999999 99999999 67665

>2epx_A Zinc finger protein 28 homolog; C2H2, zinc finger domain, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.06  E-value=3.2e-11  Score=68.81  Aligned_cols=46  Identities=13%  Similarity=0.033  Sum_probs=39.7

Q ss_pred             HHHHhhcCCCCCCCCCCCCCCCCCCccCCCCChhhhccccccCCCCCCCCCCCC
Q 044013           43 GHMNIHRKDRAKNRPPSSSSISDKLTFFPSPSTWDDHQRSVHTNNNNHSNYDSY   96 (153)
Q Consensus        43 ~H~r~H~gekp~~C~~c~~~~Cgk~~~F~~~~~L~~H~~~~Ht~~kp~~~~~~~   96 (153)
                      .|+++|++++||.|..|++.       |.....|..|++.+|++++|| .|.+|
T Consensus         2 ~H~~~H~~~k~~~C~~C~k~-------F~~~~~L~~H~~~~H~~~k~~-~C~~C   47 (47)
T 2epx_A            2 SSGSSGTGKKPYECIECGKA-------FIQNTSLIRHWRYYHTGEKPS-GPSSG   47 (47)
T ss_dssp             CCCCCCCCCCSBCCSSSCCC-------BSSHHHHHHHHTTTTTTSCSS-SCCCC
T ss_pred             ccccccCCCCCEECCccCch-------hCChHHHHHHhHhhcCCCCCC-CCCCC
Confidence            37889999999999966666       999999999997579999999 67665

>2yte_A Zinc finger protein 473; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.06  E-value=2.7e-11  Score=67.49  Aligned_cols=40  Identities=15%  Similarity=0.199  Sum_probs=36.0

Q ss_pred             HHHhhcCCCCCCCCCCCCCCCCCCccCCCCChhhhccccccCCCCCCC
Q 044013           44 HMNIHRKDRAKNRPPSSSSISDKLTFFPSPSTWDDHQRSVHTNNNNHS   91 (153)
Q Consensus        44 H~r~H~gekp~~C~~c~~~~Cgk~~~F~~~~~L~~H~~~~Ht~~kp~~   91 (153)
                      |+++|++++||.|+.|++.       |.....|..|++ +|++++||.
T Consensus         1 H~~~H~~~k~~~C~~C~k~-------f~~~~~L~~H~~-~H~~~~~~~   40 (42)
T 2yte_A            1 GSSGSSGEKPYSCAECKET-------FSDNNRLVQHQK-MHTVKSGPS   40 (42)
T ss_dssp             CCSSSCSCCSCBCTTTCCB-------CSSHHHHHHHHH-HTSCCSSCC
T ss_pred             CCcCcCCCCCeECCCCCCc-------cCCHHHHHHHHH-HhCCCCCCC
Confidence            6789999999999966666       999999999999 999999993

>2j7j_A Transcription factor IIIA; zinc finger module, alternative initiation, nuclear protein, phosphorylation, hydrophobic core, zinc, RNA-binding; 1.65A {Xenopus laevis} SCOP: g.37.1.1 g.37.1.1 g.37.1.1 PDB: 1un6_B 2hgh_A

Probab=99.05  E-value=9.8e-12  Score=79.08  Aligned_cols=64  Identities=14%  Similarity=0.174  Sum_probs=53.1

Q ss_pred             CCCcccccCCCCcceeccc--cccccCChhHHHHHHHhhcCCCCCCCCCCCCCCCCCCccCCCCChhhhcccccc
Q 044013           12 SSSDDETDAGTGRSYECVF--CKRGFTTAQALGGHMNIHRKDRAKNRPPSSSSISDKLTFFPSPSTWDDHQRSVH   84 (153)
Q Consensus        12 ~~~h~~~~~~gekp~~C~~--Cgk~F~~~~~L~~H~r~H~gekp~~C~~c~~~~Cgk~~~F~~~~~L~~H~~~~H   84 (153)
                      |..|++.+++ ++||.|++  |++.|.....|..|+++|++   |.|+.+.  .|++.  |.....|..|++ +|
T Consensus        19 l~~H~~~h~~-~~~~~C~~~~C~~~f~~~~~l~~H~~~h~~---~~C~~~~--~C~~~--f~~~~~l~~H~~-~h   84 (85)
T 2j7j_A           19 LKVHQFSHTQ-QLPYECPHEGCDKRFSLPSRLKRHEKVHAG---YPCKKDD--SCSFV--GKTWTLYLKHVA-EC   84 (85)
T ss_dssp             HHHHHHHHHT-TCCEECCSTTCCCEESSHHHHHHHHHHHHS---EECCSCS--SCCCE--ESSHHHHHHHHH-HC
T ss_pred             HHHHHHHhCC-CCCeeCCCCCCcCccCCHHHHHHHHHHhCC---CCCCCCC--CCCCc--cCCHHHHHHHHH-hc
Confidence            5667777665 89999998  99999999999999999998   8998610  14444  999999999998 65

>2eq1_A Zinc finger protein 347; C2H2, zinc finger domain, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.05  E-value=3.9e-11  Score=68.28  Aligned_cols=43  Identities=14%  Similarity=0.163  Sum_probs=37.9

Q ss_pred             HHHHhhcCCCCCCCCCCCCCCCCCCccCCCCChhhhccccccCCCCCCCCCC
Q 044013           43 GHMNIHRKDRAKNRPPSSSSISDKLTFFPSPSTWDDHQRSVHTNNNNHSNYD   94 (153)
Q Consensus        43 ~H~r~H~gekp~~C~~c~~~~Cgk~~~F~~~~~L~~H~~~~Ht~~kp~~~~~   94 (153)
                      .|+++|++++||.|..|++.       |.....|..|++ +|++++|| .|.
T Consensus         2 ~H~~~H~~~k~~~C~~C~k~-------f~~~~~L~~H~~-~H~~~k~~-~C~   44 (46)
T 2eq1_A            2 SSGSSGTGEKPYKCNECGKA-------FRAHSNLTTHQV-IHTGEKPS-GPS   44 (46)
T ss_dssp             CCCCCCCCSCCCCCTTTTCC-------CSSHHHHHHHHT-TTCCSCCS-SCC
T ss_pred             CcccccCCCCCeECCcCChh-------hCCHHHHHHHHH-HhCCCCCC-CCC
Confidence            47889999999999966666       999999999999 99999999 453

>2yti_A Zinc finger protein 347; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.05  E-value=3.8e-11  Score=68.31  Aligned_cols=43  Identities=12%  Similarity=0.137  Sum_probs=37.8

Q ss_pred             HHHHhhcCCCCCCCCCCCCCCCCCCccCCCCChhhhccccccCCCCCCCCCC
Q 044013           43 GHMNIHRKDRAKNRPPSSSSISDKLTFFPSPSTWDDHQRSVHTNNNNHSNYD   94 (153)
Q Consensus        43 ~H~r~H~gekp~~C~~c~~~~Cgk~~~F~~~~~L~~H~~~~Ht~~kp~~~~~   94 (153)
                      .|+++|++++||.|+.|++.       |.....|..|++ +|++++|| .|.
T Consensus         2 ~H~~~H~~~k~~~C~~C~k~-------F~~~~~L~~H~~-~H~~~k~~-~C~   44 (46)
T 2yti_A            2 SSGSSGTGEKPYKCNECGKV-------FTQNSHLARHRG-IHTGEKPS-GPS   44 (46)
T ss_dssp             CCCCCCSCCCTTCCSSSCCC-------CSSHHHHHHHHT-TTSCSCCS-STT
T ss_pred             CCCcCCCCCcCeECCCCCcc-------cCChhHHHHHhH-hcCCCCCC-CCC
Confidence            47889999999999966666       999999999999 99999999 453

>2ep1_A Zinc finger protein 484; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.05  E-value=3.9e-11  Score=68.21  Aligned_cols=43  Identities=21%  Similarity=0.216  Sum_probs=37.9

Q ss_pred             HHHHhhcCCCCCCCCCCCCCCCCCCccCCCCChhhhccccccCCCCCCCCCC
Q 044013           43 GHMNIHRKDRAKNRPPSSSSISDKLTFFPSPSTWDDHQRSVHTNNNNHSNYD   94 (153)
Q Consensus        43 ~H~r~H~gekp~~C~~c~~~~Cgk~~~F~~~~~L~~H~~~~Ht~~kp~~~~~   94 (153)
                      .|+++|++++||.|..|++.       |.....|..|++ +|++++|| .|.
T Consensus         2 ~H~~~H~~~k~~~C~~C~k~-------f~~~~~L~~H~~-~H~~~k~~-~C~   44 (46)
T 2ep1_A            2 SSGSSGTGEKPYECSDCGKS-------FIKKSQLHVHQR-IHTGENPS-GPS   44 (46)
T ss_dssp             CCCCCCSSCCSSCCSSSCCC-------CSSHHHHHHHHG-GGSSSCCC-SSS
T ss_pred             ccccCCCCCCCcCCCCCCch-------hCCHHHHHHHHH-HhCCCCCC-CCC
Confidence            47889999999999966666       999999999999 99999999 454

>2emg_A Zinc finger protein 484; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.05  E-value=3.8e-11  Score=68.32  Aligned_cols=43  Identities=12%  Similarity=0.071  Sum_probs=38.0

Q ss_pred             HHHHhhcCCCCCCCCCCCCCCCCCCccCCCCChhhhccccccCCCCCCCCCC
Q 044013           43 GHMNIHRKDRAKNRPPSSSSISDKLTFFPSPSTWDDHQRSVHTNNNNHSNYD   94 (153)
Q Consensus        43 ~H~r~H~gekp~~C~~c~~~~Cgk~~~F~~~~~L~~H~~~~Ht~~kp~~~~~   94 (153)
                      .|+++|++++||.|..|++.       |.....|..|++ +|++++|| .|.
T Consensus         2 ~H~~~H~~~k~~~C~~C~k~-------f~~~~~L~~H~~-~H~~~~~~-~C~   44 (46)
T 2emg_A            2 SSGSSGTGENPFICSECGKV-------FTHKTNLIIHQK-IHTGERPS-GPS   44 (46)
T ss_dssp             CCCCCCCSCCSCBCTTTCCB-------CSSHHHHHHHHT-TTSCCCCS-CSC
T ss_pred             CCCCCCCCCCCEECCccCcc-------cCCHHHHHHHHH-HhCCCCCC-CCC
Confidence            47889999999999966666       999999999999 99999999 454

>2en7_A Zinc finger protein 268; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.04  E-value=4.1e-11  Score=67.39  Aligned_cols=41  Identities=20%  Similarity=0.080  Sum_probs=36.9

Q ss_pred             HHHHhhcCCCCCCCCCCCCCCCCCCccCCCCChhhhccccccCCCCCCC
Q 044013           43 GHMNIHRKDRAKNRPPSSSSISDKLTFFPSPSTWDDHQRSVHTNNNNHS   91 (153)
Q Consensus        43 ~H~r~H~gekp~~C~~c~~~~Cgk~~~F~~~~~L~~H~~~~Ht~~kp~~   91 (153)
                      .|+++|++++||.|..|++.       |.....|..|++ +|++++||.
T Consensus         2 ~H~~~H~~~k~~~C~~C~k~-------f~~~~~L~~H~~-~H~~~~~~~   42 (44)
T 2en7_A            2 SSGSSGTGMKPYVCNECGKA-------FRSKSYLIIHTR-THTGESGPS   42 (44)
T ss_dssp             CSCCCSSSSSSSCCTTTCCC-------CSSHHHHHHHHT-TTCCSSSSC
T ss_pred             CCCcCCCCCcCeECCCCCCc-------cCCHHHHHHHhh-hcCCCCCCC
Confidence            47889999999999966666       999999999999 999999993

>2eon_A ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.04  E-value=4.2e-11  Score=68.29  Aligned_cols=42  Identities=12%  Similarity=0.125  Sum_probs=37.3

Q ss_pred             HHHhhcCCCCCCCCCCCCCCCCCCccCCCCChhhhccccccCCCCCCCCCC
Q 044013           44 HMNIHRKDRAKNRPPSSSSISDKLTFFPSPSTWDDHQRSVHTNNNNHSNYD   94 (153)
Q Consensus        44 H~r~H~gekp~~C~~c~~~~Cgk~~~F~~~~~L~~H~~~~Ht~~kp~~~~~   94 (153)
                      |+++|++++||.|..|++.       |.....|..|++ +|++++|| .|.
T Consensus         3 h~~~H~~~k~~~C~~C~k~-------f~~~~~L~~H~~-~H~~~k~~-~C~   44 (46)
T 2eon_A            3 SGSSGTGEKPYKCQVCGKA-------FRVSSHLVQHHS-VHSGERPS-GPS   44 (46)
T ss_dssp             CSSSCSSCCSCBCSSSCCB-------CSSHHHHHHHTT-TTTSCCSC-TTS
T ss_pred             CCCCCCCCcccCCCCCCcc-------cCcHHHHHHHHH-hcCCCCCC-CCC
Confidence            6789999999999966666       999999999999 99999999 454

>2wbt_A B-129; zinc finger; 2.70A {Sulfolobus virus 1}

Probab=99.04  E-value=9.6e-12  Score=85.75  Aligned_cols=57  Identities=21%  Similarity=0.328  Sum_probs=51.8

Q ss_pred             CCCcceeccccccccCChhHHHHHHHhhcCCCCCCCCCCCCCCCCCCccCCCCChhhhccccccCCC
Q 044013           21 GTGRSYECVFCKRGFTTAQALGGHMNIHRKDRAKNRPPSSSSISDKLTFFPSPSTWDDHQRSVHTNN   87 (153)
Q Consensus        21 ~gekp~~C~~Cgk~F~~~~~L~~H~r~H~gekp~~C~~c~~~~Cgk~~~F~~~~~L~~H~~~~Ht~~   87 (153)
                      .+++||.|.+|++.|.....|..|+++|  ++||.|+.|++.       |.....|..|++ +|++.
T Consensus        70 ~~~~~~~C~~C~k~f~~~~~l~~H~~~H--~~~~~C~~C~k~-------f~~~~~l~~H~~-~h~~~  126 (129)
T 2wbt_A           70 KAISQFVCPLCLMPFSSSVSLKQHIRYT--EHTKVCPVCKKE-------FTSTDSALDHVC-KKHNI  126 (129)
T ss_dssp             HHHCSEECTTTCCEESSHHHHHHHHHHT--CCCCBCTTTCCB-------CSSHHHHHHHHH-HTTCC
T ss_pred             CCCCCeECCCCCcccCCHhHHHHHHHHC--CCCCCCCCCCcc-------cCCHHHHHHHHH-HHCCc
Confidence            3489999999999999999999999999  899999966665       999999999999 88875

>2enf_A Zinc finger protein 347; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.04  E-value=3.6e-11  Score=68.42  Aligned_cols=43  Identities=12%  Similarity=0.117  Sum_probs=37.8

Q ss_pred             HHHHhhcCCCCCCCCCCCCCCCCCCccCCCCChhhhccccccCCCCCCCCCC
Q 044013           43 GHMNIHRKDRAKNRPPSSSSISDKLTFFPSPSTWDDHQRSVHTNNNNHSNYD   94 (153)
Q Consensus        43 ~H~r~H~gekp~~C~~c~~~~Cgk~~~F~~~~~L~~H~~~~Ht~~kp~~~~~   94 (153)
                      .|+++|++++||.|+.|++.       |.....|..|++ +|++++|| .|.
T Consensus         2 ~H~~~H~~~k~~~C~~C~k~-------F~~~~~L~~H~~-~H~~~k~~-~C~   44 (46)
T 2enf_A            2 SSGSSGTGEKPYKCNECGKV-------FTQNSHLVRHRG-IHTGEKPS-GPS   44 (46)
T ss_dssp             CCCCCCCCCCSCBCSSSCCB-------CSSHHHHHHHHT-TTTTSSCC-CCS
T ss_pred             CCCcCCCCCcCeECCCCCcc-------cCCHHHHHHHHH-hhCCCCCC-CCC
Confidence            47889999999999966665       999999999999 99999999 453

>2eoh_A Zinc finger protein 28 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.04  E-value=3.5e-11  Score=68.55  Aligned_cols=41  Identities=15%  Similarity=0.204  Sum_probs=36.8

Q ss_pred             HHHHhhcCCCCCCCCCCCCCCCCCCccCCCCChhhhccccccCCCCCCC
Q 044013           43 GHMNIHRKDRAKNRPPSSSSISDKLTFFPSPSTWDDHQRSVHTNNNNHS   91 (153)
Q Consensus        43 ~H~r~H~gekp~~C~~c~~~~Cgk~~~F~~~~~L~~H~~~~Ht~~kp~~   91 (153)
                      .|+++|++++||.|..|++.       |.....|..|++ +|++++||.
T Consensus         2 ~H~~~H~~~k~~~C~~C~k~-------f~~~~~L~~H~~-~H~~~k~~~   42 (46)
T 2eoh_A            2 SSGSSGSGKKPYECKECRKT-------FIQIGHLNQHKR-VHTGERSSG   42 (46)
T ss_dssp             CCCCSCCCSCSCCCSSSCCC-------CSSHHHHHHHHH-HCSSCCSCS
T ss_pred             CCCCCcCCCCCcCCCCcCch-------hCCHHHHHHHHH-HhCCCCCCC
Confidence            37889999999999966666       999999999999 999999993

>2yth_A Zinc finger protein 224; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.04  E-value=4.1e-11  Score=68.25  Aligned_cols=43  Identities=19%  Similarity=0.203  Sum_probs=37.8

Q ss_pred             HHHHhhcCCCCCCCCCCCCCCCCCCccCCCCChhhhccccccCCCCCCCCCC
Q 044013           43 GHMNIHRKDRAKNRPPSSSSISDKLTFFPSPSTWDDHQRSVHTNNNNHSNYD   94 (153)
Q Consensus        43 ~H~r~H~gekp~~C~~c~~~~Cgk~~~F~~~~~L~~H~~~~Ht~~kp~~~~~   94 (153)
                      .|+++|++++||.|+.|++.       |.....|..|++ +|++++|| .|.
T Consensus         2 ~H~~~H~~~k~~~C~~C~k~-------f~~~~~L~~H~~-~H~~~k~~-~C~   44 (46)
T 2yth_A            2 SSGSSGSGEKPFQCEECGKR-------FTQNSHLHSHQR-VHTGEKPS-GPS   44 (46)
T ss_dssp             CCCSCCCCSSSBCCSSSCCC-------BSSHHHHHHHGG-GGTTCCCS-SCC
T ss_pred             CcccCCCCCcCCCCCCCCcc-------cCCHHHHHHHHH-hcCCCCCC-CCC
Confidence            47889999999999966666       999999999999 99999999 443

>2em6_A Zinc finger protein 224; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.03  E-value=4.2e-11  Score=68.21  Aligned_cols=43  Identities=19%  Similarity=0.207  Sum_probs=37.9

Q ss_pred             HHHHhhcCCCCCCCCCCCCCCCCCCccCCCCChhhhccccccCCCCCCCCCC
Q 044013           43 GHMNIHRKDRAKNRPPSSSSISDKLTFFPSPSTWDDHQRSVHTNNNNHSNYD   94 (153)
Q Consensus        43 ~H~r~H~gekp~~C~~c~~~~Cgk~~~F~~~~~L~~H~~~~Ht~~kp~~~~~   94 (153)
                      .|+++|++++||.|..|++.       |.....|..|++ +|++++|| .|.
T Consensus         2 ~H~~~H~~~k~~~C~~C~k~-------f~~~~~L~~H~~-~H~~~k~~-~C~   44 (46)
T 2em6_A            2 SSGSSGMGEKCYKCDVCGKE-------FSQSSHLQTHQR-VHTGEKPS-GPS   44 (46)
T ss_dssp             CCCSCCCCCCCCBCSSSCCB-------CSSHHHHHHHHT-TTSSSCCC-CTT
T ss_pred             CCccccCCCCCeECCCCCcc-------cCCHHHHHHHHH-HcCCCCCC-CCC
Confidence            47889999999999966666       999999999999 99999999 453

>2el5_A Zinc finger protein 268; alternative splicing, DNA-binding, metal-binding, nuclear protein, repeat, transcription, transcription regulation; NMR {Homo sapiens} SCOP: k.12.1.1 PDB: 2eol_A 2emv_A 2eqw_A 2en0_A 2epy_A

Probab=99.03  E-value=2.1e-11  Score=68.03  Aligned_cols=40  Identities=15%  Similarity=0.161  Sum_probs=36.0

Q ss_pred             HHHhhcCCCCCCCCCCCCCCCCCCccCCCCChhhhccccccCCCCCCC
Q 044013           44 HMNIHRKDRAKNRPPSSSSISDKLTFFPSPSTWDDHQRSVHTNNNNHS   91 (153)
Q Consensus        44 H~r~H~gekp~~C~~c~~~~Cgk~~~F~~~~~L~~H~~~~Ht~~kp~~   91 (153)
                      |+++|++++||.|+.|++.       |.+...|..|++ +|++++||.
T Consensus         1 H~~~H~~~k~~~C~~C~k~-------f~~~~~L~~H~~-~H~~~~~~~   40 (42)
T 2el5_A            1 GSSGSSGENPYECSECGKA-------FNRKDQLISHQR-THAGESGPS   40 (42)
T ss_dssp             CCSSSSSCCSEECSSSCCE-------ESSHHHHHHHHG-GGCCCCSCC
T ss_pred             CCCCCCCCCCccCCCcChh-------hCCHHHHHHHHH-hcCCCCCCC
Confidence            6789999999999966666       999999999999 999999993

>2eos_A B-cell lymphoma 6 protein; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=99.03  E-value=4.4e-11  Score=66.77  Aligned_cols=39  Identities=15%  Similarity=0.188  Sum_probs=35.8

Q ss_pred             HHHhhcCCCCCCCCCCCCCCCCCCccCCCCChhhhccccccCCCCCC
Q 044013           44 HMNIHRKDRAKNRPPSSSSISDKLTFFPSPSTWDDHQRSVHTNNNNH   90 (153)
Q Consensus        44 H~r~H~gekp~~C~~c~~~~Cgk~~~F~~~~~L~~H~~~~Ht~~kp~   90 (153)
                      |+++|++++||.|+.|++.       |...+.|..|++ +|++++||
T Consensus         2 H~~~H~~~k~~~C~~C~k~-------f~~~~~L~~H~~-~H~~~~~~   40 (42)
T 2eos_A            2 SSGSSGGEKPYPCEICGTR-------FRHLQTLKSHLR-IHTGSGPS   40 (42)
T ss_dssp             CCSCCSSSCCBCCSSSCCC-------BSSHHHHHHHTT-TTSCCSST
T ss_pred             CCcccCCCCCEECCCCCCc-------cCCHHHHHHHHH-hcCCCCCC
Confidence            6789999999999966666       999999999999 99999998

>1rim_A E6APC2 peptide; E6-binding domain, zinc finger, human papillomavirus, HPV E6 protein, de novo protein; NMR {Synthetic} SCOP: k.12.1.1

Probab=99.03  E-value=1.7e-10  Score=61.27  Aligned_cols=33  Identities=21%  Similarity=0.504  Sum_probs=30.1

Q ss_pred             cceeccccccccCChhHHHHHHHhhcCCCCCCC
Q 044013           24 RSYECVFCKRGFTTAQALGGHMNIHRKDRAKNR   56 (153)
Q Consensus        24 kp~~C~~Cgk~F~~~~~L~~H~r~H~gekp~~C   56 (153)
                      +||.|.+|++.|.....|..|+++|++++||.+
T Consensus         1 kp~~C~~C~k~F~~~~~L~~H~~~H~~~~~~~r   33 (33)
T 1rim_A            1 YKFACPECPKRFMRSDHLSKHITLHELLGEERR   33 (33)
T ss_dssp             CCCCCSSSCCCCSSHHHHHHHHHHHTTTCCCCC
T ss_pred             CcccCCCCCchhCCHHHHHHHHHHhCCCCCCCC
Confidence            589999999999999999999999999999863

>2em2_A Zinc finger protein 28 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.03  E-value=1.7e-11  Score=69.90  Aligned_cols=44  Identities=14%  Similarity=0.148  Sum_probs=38.6

Q ss_pred             HHHHhhcCCCCCCCCCCCCCCCCCCccCCCCChhhhccccccCCCCCCCCCCC
Q 044013           43 GHMNIHRKDRAKNRPPSSSSISDKLTFFPSPSTWDDHQRSVHTNNNNHSNYDS   95 (153)
Q Consensus        43 ~H~r~H~gekp~~C~~c~~~~Cgk~~~F~~~~~L~~H~~~~Ht~~kp~~~~~~   95 (153)
                      .|+++|++++||.|..|++.       |.....|..|++ +|++++|| .|..
T Consensus         2 ~H~~~H~~~k~~~C~~C~k~-------f~~~~~L~~H~~-~H~~~k~~-~C~~   45 (46)
T 2em2_A            2 SSGSSGSGEKPFKCKECGKA-------FRQNIHLASHLR-IHTGEKPS-GPSS   45 (46)
T ss_dssp             CCCCSCCCCCSEECSSSCCE-------ESSHHHHHHHHH-HHCCCCSS-CSSC
T ss_pred             CCCCCCCCCCCEECCcCCch-------hCCHHHHHHHHH-HhCCCCCC-CCCC
Confidence            37889999999999966666       999999999999 99999999 5654

>2en6_A Zinc finger protein 268; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.02  E-value=9.9e-12  Score=70.82  Aligned_cols=45  Identities=18%  Similarity=0.169  Sum_probs=39.6

Q ss_pred             HHHHhhcCCCCCCCCCCCCCCCCCCccCCCCChhhhccccccCCCCCCCCCCCC
Q 044013           43 GHMNIHRKDRAKNRPPSSSSISDKLTFFPSPSTWDDHQRSVHTNNNNHSNYDSY   96 (153)
Q Consensus        43 ~H~r~H~gekp~~C~~c~~~~Cgk~~~F~~~~~L~~H~~~~Ht~~kp~~~~~~~   96 (153)
                      .|+++|++++||.|..|++.       |.....|..|++ +|++++|| .|..|
T Consensus         2 ~h~~~H~~~~~~~C~~C~k~-------f~~~~~L~~H~~-~H~~~k~~-~C~~C   46 (46)
T 2en6_A            2 SSGSSGSGEKPYGCNECGKT-------FSQKSILSAHQR-THTGEKPS-GPSSG   46 (46)
T ss_dssp             CCSCCCCSSCCEEETTTTEE-------ESSHHHHHHHHH-HHSSCCCS-SSCCC
T ss_pred             CCCCccCCCcCeECCCCCcc-------cCchHHHHHHHH-HcCCCCCC-CCCCC
Confidence            47889999999999966555       999999999999 99999999 67665

>2enh_A Zinc finger protein 28 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.02  E-value=6.8e-11  Score=67.32  Aligned_cols=41  Identities=15%  Similarity=0.206  Sum_probs=36.7

Q ss_pred             HHHhhcCCCCCCCCCCCCCCCCCCccCCCCChhhhccccccCCCCCCCCC
Q 044013           44 HMNIHRKDRAKNRPPSSSSISDKLTFFPSPSTWDDHQRSVHTNNNNHSNY   93 (153)
Q Consensus        44 H~r~H~gekp~~C~~c~~~~Cgk~~~F~~~~~L~~H~~~~Ht~~kp~~~~   93 (153)
                      |+++|++++||.|..|++.       |.....|..|++ +|++++|| .|
T Consensus         3 h~~~h~~~k~~~C~~C~k~-------F~~~~~L~~H~~-~H~~~k~~-~C   43 (46)
T 2enh_A            3 SGSSGTGEKPYECDVCRKA-------FSHHASLTQHQR-VHSGEKPS-GP   43 (46)
T ss_dssp             CCCCCCCSSSCBCTTTCCB-------CSSSHHHHHHGG-GSCCSCCC-CC
T ss_pred             CCCCcCCCCCcCCCCcCch-------hCCHHHHHHHHH-HhCCCCCC-CC
Confidence            6789999999999966666       999999999999 99999999 44

>2em8_A Zinc finger protein 224; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.02  E-value=1.3e-11  Score=70.35  Aligned_cols=45  Identities=18%  Similarity=0.113  Sum_probs=39.4

Q ss_pred             HHHHhhcCCCCCCCCCCCCCCCCCCccCCCCChhhhccccccCCCCCCCCCCCC
Q 044013           43 GHMNIHRKDRAKNRPPSSSSISDKLTFFPSPSTWDDHQRSVHTNNNNHSNYDSY   96 (153)
Q Consensus        43 ~H~r~H~gekp~~C~~c~~~~Cgk~~~F~~~~~L~~H~~~~Ht~~kp~~~~~~~   96 (153)
                      .|+++|++++||.|+.|++.       |.....|..|++ +|++++|| .|..|
T Consensus         2 ~h~~~h~~~k~~~C~~C~k~-------f~~~~~L~~H~~-~H~~~~~~-~C~~C   46 (46)
T 2em8_A            2 SSGSSGSGEKPYKCVECGKG-------YKRRLDLDFHQR-VHTGEKLS-GPSSG   46 (46)
T ss_dssp             CCCCCCCSCCSEECSSSCCE-------ESSHHHHHHHHH-HHHCCCCC-CSCCC
T ss_pred             CCCCCCCCCCCeECcccCch-------hCCHHHHHHHHH-HHcCCCCC-CCCCC
Confidence            37789999999999966655       999999999999 99999999 67665

>2ytp_A Zinc finger protein 484; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.01  E-value=2.9e-11  Score=68.89  Aligned_cols=43  Identities=21%  Similarity=0.199  Sum_probs=37.8

Q ss_pred             HHHHhhcCCCCCCCCCCCCCCCCCCccCCCCChhhhccccccCCCCCCCCCC
Q 044013           43 GHMNIHRKDRAKNRPPSSSSISDKLTFFPSPSTWDDHQRSVHTNNNNHSNYD   94 (153)
Q Consensus        43 ~H~r~H~gekp~~C~~c~~~~Cgk~~~F~~~~~L~~H~~~~Ht~~kp~~~~~   94 (153)
                      .|+++|++++||.|..|++.       |.....|..|++ +|++++|| .|.
T Consensus         2 ~H~~~H~~~k~~~C~~C~k~-------F~~~~~L~~H~~-~H~~~k~~-~C~   44 (46)
T 2ytp_A            2 SSGSSGTGERHYECSECGKA-------FARKSTLIMHQR-IHTGEKPS-GPS   44 (46)
T ss_dssp             CCCCSSCCCCCEECSSSCCE-------ESSHHHHHHHHT-TTSCCCCC-SSC
T ss_pred             CcccCcCCCCCeECCcCCcc-------cCCHHHHHHHHH-HhCCCCCC-CCC
Confidence            47889999999999966655       999999999999 99999999 454

>2yts_A Zinc finger protein 484; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.00  E-value=3.9e-11  Score=68.20  Aligned_cols=43  Identities=16%  Similarity=0.179  Sum_probs=37.8

Q ss_pred             HHHHhhcCCCCCCCCCCCCCCCCCCccCCCCChhhhccccccCCCCCCCCCC
Q 044013           43 GHMNIHRKDRAKNRPPSSSSISDKLTFFPSPSTWDDHQRSVHTNNNNHSNYD   94 (153)
Q Consensus        43 ~H~r~H~gekp~~C~~c~~~~Cgk~~~F~~~~~L~~H~~~~Ht~~kp~~~~~   94 (153)
                      .|+++|++++||.|+.|++.       |.....|..|++ +|++++|| .|.
T Consensus         2 ~H~~~H~~~k~~~C~~C~k~-------f~~~~~L~~H~~-~H~~~~p~-~C~   44 (46)
T 2yts_A            2 SSGSSGTGEKPYICNECGKS-------FIQKSHLNRHRR-IHTGEKPS-GPS   44 (46)
T ss_dssp             CCSCCCCSCCSEECSSSCCE-------ESSHHHHHHHGG-GTSSCCSS-CCC
T ss_pred             CCCCCCCCCcCEECCCCChh-------hCChHHHHHHHH-hcCCCCCc-CCC
Confidence            47889999999999966655       999999999999 99999999 453

>2en9_A Zinc finger protein 28 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.00  E-value=4.8e-11  Score=68.00  Aligned_cols=43  Identities=16%  Similarity=0.172  Sum_probs=37.9

Q ss_pred             HHHHhhcCCCCCCCCCCCCCCCCCCccCCCCChhhhccccccCCCCCCCCCC
Q 044013           43 GHMNIHRKDRAKNRPPSSSSISDKLTFFPSPSTWDDHQRSVHTNNNNHSNYD   94 (153)
Q Consensus        43 ~H~r~H~gekp~~C~~c~~~~Cgk~~~F~~~~~L~~H~~~~Ht~~kp~~~~~   94 (153)
                      .|+++|++++||.|..|++.       |.....|..|++ +|++++|| .|.
T Consensus         2 ~h~~~H~~~k~~~C~~C~k~-------F~~~~~L~~H~~-~H~~~k~~-~C~   44 (46)
T 2en9_A            2 SSGSSGAGKKLFKCNECKKT-------FTQSSSLTVHQR-IHTGEKPS-GPS   44 (46)
T ss_dssp             CCCSSCCSSCCCBCTTTCCB-------CSSHHHHHHHHH-HHTSSCCC-SCC
T ss_pred             CCCCCCCCCCCEECCccCcc-------cCCHHHHHHHHH-HcCCCCCC-CCC
Confidence            37889999999999966666       999999999999 99999999 454

>2cot_A Zinc finger protein 435; ADK_LID domain, zinc finger and SCAN domain containing protein 16, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1

Probab=99.00  E-value=1e-10  Score=73.64  Aligned_cols=44  Identities=25%  Similarity=0.488  Sum_probs=39.6

Q ss_pred             CCCcccccCCCCcceeccccccccCChhHHHHHHHhhcCCCCCCC
Q 044013           12 SSSDDETDAGTGRSYECVFCKRGFTTAQALGGHMNIHRKDRAKNR   56 (153)
Q Consensus        12 ~~~h~~~~~~gekp~~C~~Cgk~F~~~~~L~~H~r~H~gekp~~C   56 (153)
                      |..|++.+++ ++||.|.+|++.|.....|..|+++|++++||.|
T Consensus        34 l~~H~~~h~~-~~~~~C~~C~~~f~~~~~L~~H~~~H~~~~p~~C   77 (77)
T 2cot_A           34 LSKHRRTHTG-EKPYKCDECGKAFIQRSHLIGHHRVHTGSGPSSG   77 (77)
T ss_dssp             HHHHHTTTCC-SCSEECSSSCCEESSHHHHHHHGGGSCCCCCCCC
T ss_pred             HHHHHHHcCC-CcCeeCCCCCCccCCHHHHHHHHHHhCCCCCCCC
Confidence            5567776665 8899999999999999999999999999999987

>2yu5_A Zinc finger protein 473; ZF-C2H2 domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=98.99  E-value=3.7e-11  Score=67.73  Aligned_cols=41  Identities=12%  Similarity=0.130  Sum_probs=36.8

Q ss_pred             HHHHhhcCCCCCCCCCCCCCCCCCCccCCCCChhhhccccccCCCCCCC
Q 044013           43 GHMNIHRKDRAKNRPPSSSSISDKLTFFPSPSTWDDHQRSVHTNNNNHS   91 (153)
Q Consensus        43 ~H~r~H~gekp~~C~~c~~~~Cgk~~~F~~~~~L~~H~~~~Ht~~kp~~   91 (153)
                      .|+++|++++||.|+.|++.       |.....|..|++ +|++++||.
T Consensus         2 ~H~~~H~~~k~~~C~~C~k~-------f~~~~~L~~H~~-~H~~~~~~~   42 (44)
T 2yu5_A            2 SSGSSGAGENPFKCSKCDRV-------FTQRNYLVQHER-THARKSGPS   42 (44)
T ss_dssp             CCSCCCSCCCSEECSSSSCE-------ESSSHHHHHHHH-HCCCCCSSC
T ss_pred             CCccccCCCCCeECCCCCch-------hCCHHHHHHHhH-hcCCCCCCC
Confidence            47889999999999966666       999999999999 999999993

>2eoj_A Zinc finger protein 268; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=98.99  E-value=3.5e-11  Score=67.76  Aligned_cols=41  Identities=12%  Similarity=0.127  Sum_probs=36.7

Q ss_pred             HHHHhhcCCCCCCCCCCCCCCCCCCccCCCCChhhhccccccCCCCCCC
Q 044013           43 GHMNIHRKDRAKNRPPSSSSISDKLTFFPSPSTWDDHQRSVHTNNNNHS   91 (153)
Q Consensus        43 ~H~r~H~gekp~~C~~c~~~~Cgk~~~F~~~~~L~~H~~~~Ht~~kp~~   91 (153)
                      .|+++|++++||.|+.|++.       |.....|..|++ +|++++||.
T Consensus         2 ~H~~~H~~~k~~~C~~C~k~-------f~~~~~L~~H~~-~H~~~~~~~   42 (44)
T 2eoj_A            2 SSGSSGTGENPYECCECGKV-------FSRKDQLVSHQK-THSGQSGPS   42 (44)
T ss_dssp             CSCCSSSSCCSCEETTTTEE-------CSSHHHHHHHHT-TSSSSCSCC
T ss_pred             CCccccCCCcCeeCCCCCCc-------cCCHHHHHHHHH-HcCCCCCCC
Confidence            37889999999999966655       999999999999 999999993

>2emi_A Zinc finger protein 484; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=98.99  E-value=3.9e-11  Score=68.28  Aligned_cols=43  Identities=19%  Similarity=0.192  Sum_probs=37.7

Q ss_pred             HHHHhhcCCCCCCCCCCCCCCCCCCccCCCCChhhhccccccCCCCCCCCCC
Q 044013           43 GHMNIHRKDRAKNRPPSSSSISDKLTFFPSPSTWDDHQRSVHTNNNNHSNYD   94 (153)
Q Consensus        43 ~H~r~H~gekp~~C~~c~~~~Cgk~~~F~~~~~L~~H~~~~Ht~~kp~~~~~   94 (153)
                      .|+++|++++||.|+.|++.       |.....|..|++ +|++++|| .|.
T Consensus         2 ~H~~~H~~~~~~~C~~C~k~-------F~~~~~L~~H~~-~H~~~k~~-~C~   44 (46)
T 2emi_A            2 SSGSSGTGERHYECSECGKA-------FIQKSTLSMHQR-IHRGEKPS-GPS   44 (46)
T ss_dssp             CCCCSCSSCCCEECSSSCCE-------ESSHHHHHHHHG-GGCSCCCC-SCC
T ss_pred             CCCcccCCCCCCCCCCCCcc-------cCCHHHHHHHHh-HhCCCCCC-CCC
Confidence            47889999999999966655       999999999999 99999999 443

>2em4_A Zinc finger protein 28 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=98.99  E-value=2.4e-11  Score=69.26  Aligned_cols=43  Identities=16%  Similarity=0.126  Sum_probs=37.8

Q ss_pred             HHHHhhcCCCCCCCCCCCCCCCCCCccCCCCChhhhccccccCCCCCCCCCC
Q 044013           43 GHMNIHRKDRAKNRPPSSSSISDKLTFFPSPSTWDDHQRSVHTNNNNHSNYD   94 (153)
Q Consensus        43 ~H~r~H~gekp~~C~~c~~~~Cgk~~~F~~~~~L~~H~~~~Ht~~kp~~~~~   94 (153)
                      .|+++|++++||.|..|++.       |.....|..|++ +|++++|| .|.
T Consensus         2 ~H~~~H~~~k~~~C~~C~k~-------f~~~~~L~~H~~-~H~~~k~~-~C~   44 (46)
T 2em4_A            2 SSGSSGTGQRPYECIECGKA-------FKTKSSLICHRR-SHTGEKPS-GPS   44 (46)
T ss_dssp             CSCCCCCCSSSEECSSSCCE-------ESSHHHHHHHHH-HHSSSSCC-CCC
T ss_pred             CCccccCCCcCcCCCCCCCc-------cCCHHHHHHHHH-hcCCCCCC-CCC
Confidence            37889999999999966655       999999999999 99999999 454

>2ytf_A Zinc finger protein 268; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=98.98  E-value=4e-11  Score=68.18  Aligned_cols=43  Identities=16%  Similarity=0.146  Sum_probs=37.8

Q ss_pred             HHHHhhcCCCCCCCCCCCCCCCCCCccCCCCChhhhccccccCCCCCCCCCC
Q 044013           43 GHMNIHRKDRAKNRPPSSSSISDKLTFFPSPSTWDDHQRSVHTNNNNHSNYD   94 (153)
Q Consensus        43 ~H~r~H~gekp~~C~~c~~~~Cgk~~~F~~~~~L~~H~~~~Ht~~kp~~~~~   94 (153)
                      .|+++|++++||.|+.|++.       |.....|..|++ +|++++|| .|.
T Consensus         2 ~H~~~H~~~k~~~C~~C~k~-------f~~~~~L~~H~~-~H~~~k~~-~C~   44 (46)
T 2ytf_A            2 SSGSSGTGEKPFECSECQKA-------FNTKSNLIVHQR-THTGEKPS-GPS   44 (46)
T ss_dssp             CCCCSSCCCCSEECSSSCCE-------ESSHHHHHHHHH-TSCSSSSS-CCC
T ss_pred             CCCCCCCCCCCcCCCCCCcc-------cCCHHHHHHHHH-HhCCCCCC-CCC
Confidence            47889999999999966655       999999999999 99999999 454

>2yrj_A Zinc finger protein 473; C2H2-type zinc finger, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=98.98  E-value=4.5e-11  Score=67.93  Aligned_cols=43  Identities=14%  Similarity=0.210  Sum_probs=37.9

Q ss_pred             HHHHhhcCCCCCCCCCCCCCCCCCCccCCCCChhhhccccccCCCCCCCCCC
Q 044013           43 GHMNIHRKDRAKNRPPSSSSISDKLTFFPSPSTWDDHQRSVHTNNNNHSNYD   94 (153)
Q Consensus        43 ~H~r~H~gekp~~C~~c~~~~Cgk~~~F~~~~~L~~H~~~~Ht~~kp~~~~~   94 (153)
                      .|+++|++++||.|..|++.       |.....|..|++ +|++++|| .|.
T Consensus         2 ~H~~~H~~~~~~~C~~C~k~-------f~~~~~L~~H~~-~H~~~k~~-~C~   44 (46)
T 2yrj_A            2 SSGSSGTGEKPYRCGECGKA-------FAQKANLTQHQR-IHTGEKPS-GPS   44 (46)
T ss_dssp             CCCCCCCCCCCEECSSSCCE-------ESSHHHHHHHHT-TTSSCCSS-CSC
T ss_pred             CCccCCCCCCCeECCCCCCc-------cCCHHHHHHHHH-HcCCCCCC-CCC
Confidence            47889999999999966666       999999999999 99999999 454

>2emj_A Zinc finger protein 28 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 PDB: 2eoi_A

Probab=98.98  E-value=2.9e-11  Score=68.91  Aligned_cols=43  Identities=19%  Similarity=0.217  Sum_probs=37.9

Q ss_pred             HHHHhhcCCCCCCCCCCCCCCCCCCccCCCCChhhhccccccCCCCCCCCCC
Q 044013           43 GHMNIHRKDRAKNRPPSSSSISDKLTFFPSPSTWDDHQRSVHTNNNNHSNYD   94 (153)
Q Consensus        43 ~H~r~H~gekp~~C~~c~~~~Cgk~~~F~~~~~L~~H~~~~Ht~~kp~~~~~   94 (153)
                      .|+++|++++||.|+.|++.       |.....|..|++ +|++++|| .|.
T Consensus         2 ~H~~~H~~~k~~~C~~C~k~-------F~~~~~L~~H~~-~H~~~k~~-~C~   44 (46)
T 2emj_A            2 SSGSSGTGEKPFECAECGKS-------FSISSQLATHQR-IHTGEKPS-GPS   44 (46)
T ss_dssp             CCCCCCCCCCSEECSSSSCE-------ESSHHHHHHHHH-HHTTSCSS-SSC
T ss_pred             CCCCCCCCCCCEECCCCCcc-------cCCHHHHHHHHH-HhCCCCCC-CCC
Confidence            47889999999999966666       999999999999 99999999 454

>2eow_A Zinc finger protein 347; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=98.97  E-value=3.4e-11  Score=68.44  Aligned_cols=43  Identities=12%  Similarity=0.120  Sum_probs=37.9

Q ss_pred             HHHHhhcCCCCCCCCCCCCCCCCCCccCCCCChhhhccccccCCCCCCCCCC
Q 044013           43 GHMNIHRKDRAKNRPPSSSSISDKLTFFPSPSTWDDHQRSVHTNNNNHSNYD   94 (153)
Q Consensus        43 ~H~r~H~gekp~~C~~c~~~~Cgk~~~F~~~~~L~~H~~~~Ht~~kp~~~~~   94 (153)
                      .|+++|++++||.|..|++.       |.....|..|++ +|++++|| .|.
T Consensus         2 ~H~~~H~~~k~~~C~~C~k~-------f~~~~~L~~H~~-~H~~~k~~-~C~   44 (46)
T 2eow_A            2 SSGSSGTGEKPYKCNECGKA-------FRARSSLAIHQA-THSGEKPS-GPS   44 (46)
T ss_dssp             CCCCCSCCCCCEECTTSCCE-------ESSHHHHHHHHH-HHCCCSCS-CTT
T ss_pred             CccCCCCCCCCeeccccCCh-------hcCHHHHHHHHH-HcCCCCCC-CCC
Confidence            47889999999999966666       999999999999 99999999 454

>2ct1_A Transcriptional repressor CTCF; CCCTC-BINDING factor, zinc finger, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1

Probab=98.97  E-value=1.3e-11  Score=77.81  Aligned_cols=61  Identities=15%  Similarity=0.160  Sum_probs=49.9

Q ss_pred             HHHHHHhhcCCCCCCCCCCCCCCCCCCccCCCCChhhhccccccCCC-CCCCCCCCCccccccCCcccchh
Q 044013           41 LGGHMNIHRKDRAKNRPPSSSSISDKLTFFPSPSTWDDHQRSVHTNN-NNHSNYDSYGQNYHQHLNMIGDE  110 (153)
Q Consensus        41 L~~H~r~H~gekp~~C~~c~~~~Cgk~~~F~~~~~L~~H~~~~Ht~~-kp~~~~~~~~~~f~~~~~~~~~~  110 (153)
                      |..|+++|++++||.|+.|++.       |.....|..|++..|+++ +|| .|..|++.|.+... +..+
T Consensus         3 ~~~H~~~H~~~k~~~C~~C~k~-------f~~~~~L~~H~~~~h~~~~~~~-~C~~C~~~f~~~~~-L~~H   64 (77)
T 2ct1_A            3 SGSSGRTHSGEKPYECYICHAR-------FTQSGTMKMHILQKHTENVAKF-HCPHCDTVIARKSD-LGVH   64 (77)
T ss_dssp             CCCCCCCCSCCCSEECTTTCCE-------ESCHHHHHHHHHHHSSSSCSSE-ECSSSSCEESSHHH-HHHH
T ss_pred             CCccccccCCCCCeECCCcCch-------hCCHHHHHHHHHHhcCCCCCcc-CCCCCCCccCCHHH-HHHH
Confidence            5679999999999999966666       999999999996368875 899 79999999965544 4444

>2eps_A POZ-, at HOOK-, and zinc finger-containing protein 1; C2H2, zinc finger domain, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: g.37.1.1

Probab=98.96  E-value=1.3e-10  Score=68.65  Aligned_cols=48  Identities=15%  Similarity=0.233  Sum_probs=41.9

Q ss_pred             hhcCCCCCCCCCCCCCCCCCCccCCCCChhhhccccccCCCCCCCCCCCCcccccc
Q 044013           47 IHRKDRAKNRPPSSSSISDKLTFFPSPSTWDDHQRSVHTNNNNHSNYDSYGQNYHQ  102 (153)
Q Consensus        47 ~H~gekp~~C~~c~~~~Cgk~~~F~~~~~L~~H~~~~Ht~~kp~~~~~~~~~~f~~  102 (153)
                      .|++++||.|+.|++.       |.....|..|++.+|++++|| .|..|++.|++
T Consensus         6 ~~~~~k~~~C~~C~k~-------f~~~~~L~~H~~~~H~~~k~~-~C~~C~k~F~~   53 (54)
T 2eps_A            6 SGSVGKPYICQSCGKG-------FSRPDHLNGHIKQVHTSERPH-KCQVWVSGPSS   53 (54)
T ss_dssp             CCCSSCCEECSSSCCE-------ESSHHHHHHHHHHTSCCCCCC-CSSSSCCSSCC
T ss_pred             CCCCCCCeECCCCCcc-------cCCHHHHHHHHHHhcCCCCCc-cCCCCCCCCCC
Confidence            5788999999966655       999999999984389999999 79999999964

>2eof_A Zinc finger protein 268; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=98.96  E-value=4.5e-11  Score=67.22  Aligned_cols=41  Identities=20%  Similarity=0.199  Sum_probs=36.8

Q ss_pred             HHHHhhcCCCCCCCCCCCCCCCCCCccCCCCChhhhccccccCCCCCCC
Q 044013           43 GHMNIHRKDRAKNRPPSSSSISDKLTFFPSPSTWDDHQRSVHTNNNNHS   91 (153)
Q Consensus        43 ~H~r~H~gekp~~C~~c~~~~Cgk~~~F~~~~~L~~H~~~~Ht~~kp~~   91 (153)
                      .|+++|++++||.|+.|++.       |.....|..|++ +|++++||.
T Consensus         2 ~H~~~H~~~k~~~C~~C~k~-------f~~~~~L~~H~~-~H~~~~~~~   42 (44)
T 2eof_A            2 SSGSSGTGEKPYECNECQKA-------FNTKSNLMVHQR-THTGESGPS   42 (44)
T ss_dssp             CCSSCCSCCCSEECTTTCCE-------ESCHHHHHHHHH-HTTTSSCSC
T ss_pred             CCccCCCCCCCeECCCCCcc-------cCCHhHHHHHHH-HhCCCCCCC
Confidence            47889999999999966666       999999999999 999999993

>2em3_A Zinc finger protein 28 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=98.96  E-value=4e-11  Score=68.22  Aligned_cols=43  Identities=14%  Similarity=0.177  Sum_probs=37.9

Q ss_pred             HHHHhhcCCCCCCCCCCCCCCCCCCccCCCCChhhhccccccCCCCCCCCCC
Q 044013           43 GHMNIHRKDRAKNRPPSSSSISDKLTFFPSPSTWDDHQRSVHTNNNNHSNYD   94 (153)
Q Consensus        43 ~H~r~H~gekp~~C~~c~~~~Cgk~~~F~~~~~L~~H~~~~Ht~~kp~~~~~   94 (153)
                      .|+++|++++||.|..|++.       |.....|..|++ +|++++|| .|.
T Consensus         2 ~H~~~H~~~~~~~C~~C~k~-------F~~~~~L~~H~~-~H~~~~~~-~C~   44 (46)
T 2em3_A            2 SSGSSGTGEKPYECKVCSKA-------FTQKAHLAQHQK-THTGEKPS-GPS   44 (46)
T ss_dssp             CCCCCCSSCCSEECSSSCCE-------ESSHHHHHHHHH-HHCCCCCC-CSC
T ss_pred             CCCCCCCCCcCeECCCCCcc-------cCCHHHHHHHHH-HhCCCCCC-CCC
Confidence            47889999999999966665       999999999999 99999999 454

>2emb_A Zinc finger protein 473; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=98.96  E-value=6.5e-11  Score=66.70  Aligned_cols=40  Identities=10%  Similarity=0.121  Sum_probs=36.5

Q ss_pred             HHHHhhcCCCCCCCCCCCCCCCCCCccCCCCChhhhccccccCCCCCC
Q 044013           43 GHMNIHRKDRAKNRPPSSSSISDKLTFFPSPSTWDDHQRSVHTNNNNH   90 (153)
Q Consensus        43 ~H~r~H~gekp~~C~~c~~~~Cgk~~~F~~~~~L~~H~~~~Ht~~kp~   90 (153)
                      .|+++|++++||.|+.|++.       |.....|..|++ +|++++||
T Consensus         2 ~H~~~H~~~k~~~C~~C~k~-------f~~~~~L~~H~~-~H~~~~~~   41 (44)
T 2emb_A            2 SSGSSGHTRKRYECSKCQAT-------FNLRKHLIQHQK-THAAKSGP   41 (44)
T ss_dssp             CCCSCCCCCSSEECTTTCCE-------ESCHHHHHHHGG-GGCCCCCT
T ss_pred             CcccccCCCCCeECCCCCCc-------cCCHHHHHHHHH-HcCCCCCc
Confidence            47889999999999966666       999999999999 99999999

>2ep0_A Zinc finger protein 28 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=98.96  E-value=6.1e-11  Score=67.46  Aligned_cols=44  Identities=20%  Similarity=0.148  Sum_probs=38.3

Q ss_pred             HHHhhcCCCCCCCCCCCCCCCCCCccCCCCChhhhccccccCCCCCCCCCCCC
Q 044013           44 HMNIHRKDRAKNRPPSSSSISDKLTFFPSPSTWDDHQRSVHTNNNNHSNYDSY   96 (153)
Q Consensus        44 H~r~H~gekp~~C~~c~~~~Cgk~~~F~~~~~L~~H~~~~Ht~~kp~~~~~~~   96 (153)
                      ++++|++++||.|..|++.       |.....|..|++ +|++++|| .|.+|
T Consensus         3 ~~~~h~~~~~~~C~~C~k~-------f~~~~~L~~H~~-~H~~~k~~-~C~~C   46 (46)
T 2ep0_A            3 SGSSGTGEKPYKCDVCHKS-------FRYGSSLTVHQR-IHTGEKPS-GPSSG   46 (46)
T ss_dssp             CCCSSTTCCSEECSSSCCE-------ESSHHHHHHHHT-TTSSSCCC-SCCCC
T ss_pred             CCCCCCCCCCeeCcccCcc-------cCChHHHHHHHH-HhCCCCCC-CCCCC
Confidence            4578999999999966666       999999999999 99999999 67665

>2ytt_A Zinc finger protein 473; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=98.96  E-value=7.5e-11  Score=67.15  Aligned_cols=43  Identities=14%  Similarity=0.087  Sum_probs=37.8

Q ss_pred             HHhhcCCCCCCCCCCCCCCCCCCccCCCCChhhhccccccCCCCCCCCCCCC
Q 044013           45 MNIHRKDRAKNRPPSSSSISDKLTFFPSPSTWDDHQRSVHTNNNNHSNYDSY   96 (153)
Q Consensus        45 ~r~H~gekp~~C~~c~~~~Cgk~~~F~~~~~L~~H~~~~Ht~~kp~~~~~~~   96 (153)
                      +++|++++||.|+.|++.       |.....|..|++ +|++++|| .|..|
T Consensus         4 ~~~h~~~k~~~C~~C~k~-------f~~~~~L~~H~~-~H~~~k~~-~C~~C   46 (46)
T 2ytt_A            4 GSSGEGEKPYQCSECGKS-------FSGSYRLTQHWI-THTREKPS-GPSSG   46 (46)
T ss_dssp             SSSCSCCCTTCCSSSCCC-------CSSHHHHHHHHT-HHHHCCCC-SCCCC
T ss_pred             CCCCCCCCCeeCCCCCcc-------cCCHHHHHHHHH-HcCCCCCC-CCCCC
Confidence            578999999999966665       999999999999 99999999 67665

>2epc_A Zinc finger protein 32; zinc finger domain, C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} PDB: 2yta_A

Probab=98.95  E-value=4.7e-11  Score=66.48  Aligned_cols=40  Identities=15%  Similarity=0.096  Sum_probs=36.1

Q ss_pred             HHHhhcCCCCCCCCCCCCCCCCCCccCCCCChhhhccccccCCCCCCC
Q 044013           44 HMNIHRKDRAKNRPPSSSSISDKLTFFPSPSTWDDHQRSVHTNNNNHS   91 (153)
Q Consensus        44 H~r~H~gekp~~C~~c~~~~Cgk~~~F~~~~~L~~H~~~~Ht~~kp~~   91 (153)
                      |+++|++++||.|+.|++.       |.....|..|++ +|++++||.
T Consensus         2 H~~~H~~~~~~~C~~C~k~-------f~~~~~l~~H~~-~H~~~k~~~   41 (42)
T 2epc_A            2 SSGSSGGETPYLCGQCGKS-------FTQRGSLAVHQR-SCSQSGPSS   41 (42)
T ss_dssp             CCSCCCSSCCEECSSSCCE-------ESSHHHHHHHHH-HTTCCCCCC
T ss_pred             CCccCCCCCCeECCCCCcc-------cCCHHHHHHHhh-hcCCCCCCC
Confidence            6789999999999966666       999999999999 999999993

>2eoy_A Zinc finger protein 473; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=98.95  E-value=8e-11  Score=67.02  Aligned_cols=42  Identities=14%  Similarity=0.213  Sum_probs=37.2

Q ss_pred             HHHHhhcCCCCCCCCCCCCCCCCCCccCCCCChhhhccccccCC-CCCCCCC
Q 044013           43 GHMNIHRKDRAKNRPPSSSSISDKLTFFPSPSTWDDHQRSVHTN-NNNHSNY   93 (153)
Q Consensus        43 ~H~r~H~gekp~~C~~c~~~~Cgk~~~F~~~~~L~~H~~~~Ht~-~kp~~~~   93 (153)
                      .|+++|++++||.|..|++.       |.....|..|++ +|++ ++|| .|
T Consensus         2 ~H~~~H~~~k~~~C~~C~k~-------f~~~~~L~~H~~-~H~~~~~~~-~C   44 (46)
T 2eoy_A            2 SSGSSGQKEKCFKCNKCEKT-------FSCSKYLTQHER-IHTRGVKSG-PS   44 (46)
T ss_dssp             CCCCCCCCSCCEECSSSCCE-------ESSSHHHHHHHT-TCCSCCTTS-SS
T ss_pred             CCccccCCCCCEECcCCCCc-------CCCHHHHHHHHH-HcCCCCCCC-CC
Confidence            37889999999999966666       999999999999 9999 9999 44

>2eou_A Zinc finger protein 473; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=98.95  E-value=1.2e-10  Score=65.72  Aligned_cols=41  Identities=15%  Similarity=0.139  Sum_probs=36.5

Q ss_pred             HHHHhhcCCCCCCCCCCCCCCCCCCccCCCCChhhhccccccCCCCCCC
Q 044013           43 GHMNIHRKDRAKNRPPSSSSISDKLTFFPSPSTWDDHQRSVHTNNNNHS   91 (153)
Q Consensus        43 ~H~r~H~gekp~~C~~c~~~~Cgk~~~F~~~~~L~~H~~~~Ht~~kp~~   91 (153)
                      .|+++|++++||.|..|++.       |.....|..|++ +|++++||.
T Consensus         2 ~h~~~h~~~~~~~C~~C~k~-------f~~~~~L~~H~~-~H~~~k~~~   42 (44)
T 2eou_A            2 SSGSSGAAKTTSECQECGKI-------FRHSSLLIEHQA-LHAGESGPS   42 (44)
T ss_dssp             CCSCSCSSSCCCCCTTTCCC-------CSSHHHHHHHHH-HHTTSCCCC
T ss_pred             CCCCCCCCCcCeECCCCCcc-------cCCHHHHHHHHH-HHCCCCCCC
Confidence            37789999999999966666       999999999999 999999993

>2emz_A ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=98.95  E-value=5.8e-11  Score=67.63  Aligned_cols=43  Identities=14%  Similarity=0.156  Sum_probs=37.8

Q ss_pred             HHHHhhcCCCCCCCCCCCCCCCCCCccCCCCChhhhccccccCCCCCCCCCC
Q 044013           43 GHMNIHRKDRAKNRPPSSSSISDKLTFFPSPSTWDDHQRSVHTNNNNHSNYD   94 (153)
Q Consensus        43 ~H~r~H~gekp~~C~~c~~~~Cgk~~~F~~~~~L~~H~~~~Ht~~kp~~~~~   94 (153)
                      .|+++|++++||.|+.|++.       |.....|..|++ +|++++|| .|.
T Consensus         2 ~h~~~H~~~k~~~C~~C~k~-------f~~~~~L~~H~~-~H~~~k~~-~C~   44 (46)
T 2emz_A            2 SSGSSGSGERPFKCNECGKG-------FGRRSHLAGHLR-LHSREKSS-GPS   44 (46)
T ss_dssp             CCCSCSSCCCSCCCSSSCCC-------CSSHHHHHHHHH-HHHHTTCC-CSC
T ss_pred             CCCcCCCCCCCeECCCCCcc-------cCCHHHHHHHHH-HhCCCCCC-CCC
Confidence            47889999999999966666       999999999999 99999999 453

>2eor_A Zinc finger protein 224; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=98.95  E-value=3.8e-11  Score=68.26  Aligned_cols=43  Identities=19%  Similarity=0.245  Sum_probs=38.0

Q ss_pred             HHHHhhcCCCCCCCCCCCCCCCCCCccCCCCChhhhccccccCCCCCCCCCC
Q 044013           43 GHMNIHRKDRAKNRPPSSSSISDKLTFFPSPSTWDDHQRSVHTNNNNHSNYD   94 (153)
Q Consensus        43 ~H~r~H~gekp~~C~~c~~~~Cgk~~~F~~~~~L~~H~~~~Ht~~kp~~~~~   94 (153)
                      .|+++|++++||.|..|++.       |.....|..|++ +|++++|| .|.
T Consensus         2 ~H~~~H~~~~~~~C~~C~k~-------f~~~~~L~~H~~-~H~~~kp~-~C~   44 (46)
T 2eor_A            2 SSGSSGTGEKPYNCEECGKA-------FIHDSQLQEHQR-IHTGEKPS-GPS   44 (46)
T ss_dssp             CSSSSSSCCCSEECTTTCCE-------ESSHHHHHHHHH-HHHSCCCS-SST
T ss_pred             CCCcCcCCCcCccCCCCCCC-------cCCHHHHHHHHH-hcCCCCCC-CCC
Confidence            47889999999999966666       999999999999 99999999 454

>2en2_A B-cell lymphoma 6 protein; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=98.95  E-value=3.1e-11  Score=67.29  Aligned_cols=39  Identities=10%  Similarity=0.135  Sum_probs=35.9

Q ss_pred             HHHhhcCCCCCCCCCCCCCCCCCCccCCCCChhhhccccccCCCCCC
Q 044013           44 HMNIHRKDRAKNRPPSSSSISDKLTFFPSPSTWDDHQRSVHTNNNNH   90 (153)
Q Consensus        44 H~r~H~gekp~~C~~c~~~~Cgk~~~F~~~~~L~~H~~~~Ht~~kp~   90 (153)
                      |+++|++++||.|+.|++.       |.+...|..|++ +|++++||
T Consensus         2 H~~~H~~~k~~~C~~C~k~-------f~~~~~L~~H~~-~H~~~~~~   40 (42)
T 2en2_A            2 SSGSSGGEKPYKCETCGAR-------FVQVAHLRAHVL-IHTGSGPS   40 (42)
T ss_dssp             CCCCCCSSCSEECTTTCCE-------ESSHHHHHHHTH-HHHSCCSS
T ss_pred             CCcccCCCCCEeCCCcChh-------hCCHHHHHHHHH-HcCCCCCC
Confidence            6789999999999966666       999999999999 99999999

>2yto_A Zinc finger protein 484; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=98.95  E-value=4.1e-11  Score=68.27  Aligned_cols=42  Identities=14%  Similarity=0.142  Sum_probs=37.4

Q ss_pred             HHHHhhcCCCCCCCCCCCCCCCCCCccCCCCChhhhccccccCCCCCCCCC
Q 044013           43 GHMNIHRKDRAKNRPPSSSSISDKLTFFPSPSTWDDHQRSVHTNNNNHSNY   93 (153)
Q Consensus        43 ~H~r~H~gekp~~C~~c~~~~Cgk~~~F~~~~~L~~H~~~~Ht~~kp~~~~   93 (153)
                      +|+++|++++||.|+.|++.       |.....|..|++ +|++++|| .|
T Consensus         2 ~H~~~H~~~k~~~C~~C~k~-------f~~~~~L~~H~~-~H~~~k~~-~C   43 (46)
T 2yto_A            2 SSGSSGTGEKPYKCSDCGKA-------FTRKSGLHIHQQ-SHTGERHS-GP   43 (46)
T ss_dssp             CCCCCCCSCCCEECSSSCCE-------ESSHHHHHHHHH-HHTCCCBT-TT
T ss_pred             CcccccCCCCCEECcccCCc-------cCCHhHHHHHHH-HcCCCCCC-CC
Confidence            47889999999999966655       999999999999 99999999 44

>2epv_A Zinc finger protein 268; C2H2, zinc finger domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=98.95  E-value=6.4e-11  Score=66.89  Aligned_cols=41  Identities=15%  Similarity=0.078  Sum_probs=36.8

Q ss_pred             HHHHhhcCCCCCCCCCCCCCCCCCCccCCCCChhhhccccccCCCCCCC
Q 044013           43 GHMNIHRKDRAKNRPPSSSSISDKLTFFPSPSTWDDHQRSVHTNNNNHS   91 (153)
Q Consensus        43 ~H~r~H~gekp~~C~~c~~~~Cgk~~~F~~~~~L~~H~~~~Ht~~kp~~   91 (153)
                      .|+++|++++||.|..|++.       |.....|..|++ +|++++||.
T Consensus         2 ~H~~~H~~~k~~~C~~C~k~-------F~~~~~L~~H~~-~H~~~k~~~   42 (44)
T 2epv_A            2 SSGSSGSGEKPYECNECGKA-------FIWKSLLIVHER-THAGVSGPS   42 (44)
T ss_dssp             CCCCCCCCCCSEECSSSCCE-------ESSHHHHHHHHG-GGSSCSCCC
T ss_pred             CCCcccCCCcCeECCCCCcc-------cCchHHHHHHHh-HhcCCCCCC
Confidence            47889999999999966655       999999999999 999999993

>2eq3_A Zinc finger protein 347; C2H2, zinc finger domain, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=98.95  E-value=6.5e-11  Score=67.26  Aligned_cols=42  Identities=14%  Similarity=0.180  Sum_probs=37.3

Q ss_pred             HHHHhhcCCCCCCCCCCCCCCCCCCccCCCCChhhhccccccCCCCCCCCC
Q 044013           43 GHMNIHRKDRAKNRPPSSSSISDKLTFFPSPSTWDDHQRSVHTNNNNHSNY   93 (153)
Q Consensus        43 ~H~r~H~gekp~~C~~c~~~~Cgk~~~F~~~~~L~~H~~~~Ht~~kp~~~~   93 (153)
                      .|+++|++++||.|+.|++.       |.....|..|++ +|++++|| .|
T Consensus         2 ~H~~~H~~~k~~~C~~C~k~-------f~~~~~L~~H~~-~H~~~k~~-~C   43 (46)
T 2eq3_A            2 SSGSSGTGEKPYECNQCGKA-------FSVRSSLTTHQA-IHTGKKPS-GP   43 (46)
T ss_dssp             CCCCSSCCCCSSEETTTTEE-------CSSHHHHHHHHT-TSCCCCCC-CS
T ss_pred             CcccCCCCCCCeECCCCChh-------hCCHHHHHHHHH-HhCCCCCC-CC
Confidence            47889999999999966655       999999999999 99999999 44

>2elo_A Zinc finger protein 406; ZFAT zinc finger 1, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=98.95  E-value=6.2e-10  Score=60.08  Aligned_cols=32  Identities=25%  Similarity=0.738  Sum_probs=29.0

Q ss_pred             CCcceeccccccccCChhHHHHHHHhhcCCCC
Q 044013           22 TGRSYECVFCKRGFTTAQALGGHMNIHRKDRA   53 (153)
Q Consensus        22 gekp~~C~~Cgk~F~~~~~L~~H~r~H~gekp   53 (153)
                      +++||.|.+|++.|.....|..|+++|++++|
T Consensus         6 ~~k~~~C~~C~k~f~~~~~l~~H~~~h~~~kp   37 (37)
T 2elo_A            6 SGRSYSCPVCEKSFSEDRLIKSHIKTNHPEVS   37 (37)
T ss_dssp             CCCCCEETTTTEECSSHHHHHHHHHHHCSSCC
T ss_pred             CCCCcCCCCCCCccCCHHHHHHHHHHHcCCCC
Confidence            48899999999999999999999999998876

>1vd4_A Transcription initiation factor IIE, alpha subunit; zinc finger; NMR {Homo sapiens} SCOP: g.41.3.1

Probab=98.93  E-value=1.3e-11  Score=75.26  Aligned_cols=53  Identities=8%  Similarity=0.002  Sum_probs=44.2

Q ss_pred             HHHHHHhhcCCCCCCCCCCCCCCCCCCccCCCCChhhhccccccCCCCCCCCCCCCccccccCCc
Q 044013           41 LGGHMNIHRKDRAKNRPPSSSSISDKLTFFPSPSTWDDHQRSVHTNNNNHSNYDSYGQNYHQHLN  105 (153)
Q Consensus        41 L~~H~r~H~gekp~~C~~c~~~~Cgk~~~F~~~~~L~~H~~~~Ht~~kp~~~~~~~~~~f~~~~~  105 (153)
                      |..|+++|++++||.|+.|++.       |.....|.   + +|++++|| .|..|+++|.+..+
T Consensus         2 L~~h~~~H~~~k~~~C~~C~k~-------F~~~~~l~---~-~H~~~k~~-~C~~C~k~f~~~~~   54 (62)
T 1vd4_A            2 IETDERDSTNRASFKCPVCSST-------FTDLEANQ---L-FDPMTGTF-RCTFCHTEVEEDES   54 (62)
T ss_dssp             CCCCSSSCCSSSEEECSSSCCE-------EEHHHHHH---H-EETTTTEE-BCSSSCCBCEECTT
T ss_pred             hhhHHHHcCCCCCccCCCCCch-------hccHHHhH---h-hcCCCCCE-ECCCCCCccccCcc
Confidence            4568899999999999966665       99888776   6 99999999 79999999965444

>2eoz_A Zinc finger protein 473; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=98.92  E-value=4.1e-11  Score=68.25  Aligned_cols=43  Identities=14%  Similarity=0.148  Sum_probs=37.8

Q ss_pred             HHHHhhcCCCCCCCCCCCCCCCCCCccCCCCChhhhccccccCCCCCCCCCC
Q 044013           43 GHMNIHRKDRAKNRPPSSSSISDKLTFFPSPSTWDDHQRSVHTNNNNHSNYD   94 (153)
Q Consensus        43 ~H~r~H~gekp~~C~~c~~~~Cgk~~~F~~~~~L~~H~~~~Ht~~kp~~~~~   94 (153)
                      .|+++|++++||.|+.|++.       |.....|..|++ +|++++|| .|.
T Consensus         2 ~H~~~H~~~k~~~C~~C~k~-------f~~~~~L~~H~~-~H~~~~~~-~C~   44 (46)
T 2eoz_A            2 SSGSSGTGEKPYSCNVCGKA-------FVLSAHLNQHLR-VHTQETLS-GPS   44 (46)
T ss_dssp             CSCCCCSSCCSEEETTTTEE-------ESSHHHHHHHHH-HHSSCCSS-SCC
T ss_pred             CccccCCCCCCeECcccChh-------hCCHHHHHHHHH-HhCCCCCC-CCC
Confidence            47889999999999966666       999999999999 99999999 443

>1x6e_A Zinc finger protein 24; ZNF24, KOX17, ZNF191, zscan3, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1

Probab=98.92  E-value=8e-11  Score=73.32  Aligned_cols=57  Identities=21%  Similarity=0.302  Sum_probs=47.7

Q ss_pred             HHHhhcCCCCCCCCCCCCCCCCCCccCCCCChhhhccccccCCCCCCCCCCCCccccccCCcccchh
Q 044013           44 HMNIHRKDRAKNRPPSSSSISDKLTFFPSPSTWDDHQRSVHTNNNNHSNYDSYGQNYHQHLNMIGDE  110 (153)
Q Consensus        44 H~r~H~gekp~~C~~c~~~~Cgk~~~F~~~~~L~~H~~~~Ht~~kp~~~~~~~~~~f~~~~~~~~~~  110 (153)
                      +.++|++++||.|+.|++.       |.....|..|++ +|++++|| .|..|++.|.+... |..+
T Consensus         5 ~~~~H~~~k~~~C~~C~k~-------f~~~~~L~~H~~-~h~~~~~~-~C~~C~~~f~~~~~-L~~H   61 (72)
T 1x6e_A            5 SSGIHSGEKPYGCVECGKA-------FSRSSILVQHQR-VHTGEKPY-KCLECGKAFSQNSG-LINH   61 (72)
T ss_dssp             CCCTTTTCCCEECSSSCCE-------ESSHHHHHHHHH-GGGCSCCE-ECSSSCCEESSHHH-HHHH
T ss_pred             CCcccCCCCCccCCCCCCc-------cCCHHHHHHHHH-hcCCCCCe-ECCCCCcccCCHHH-HHHH
Confidence            4578999999999966655       999999999999 99999999 79999999965444 4443

>2eox_A Zinc finger protein 473; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=98.90  E-value=6.2e-11  Score=66.80  Aligned_cols=41  Identities=17%  Similarity=0.209  Sum_probs=36.8

Q ss_pred             HHHHhhcCCCCCCCCCCCCCCCCCCccCCCCChhhhccccccCCCCCCC
Q 044013           43 GHMNIHRKDRAKNRPPSSSSISDKLTFFPSPSTWDDHQRSVHTNNNNHS   91 (153)
Q Consensus        43 ~H~r~H~gekp~~C~~c~~~~Cgk~~~F~~~~~L~~H~~~~Ht~~kp~~   91 (153)
                      .|+++|++++||.|..|++.       |.....|..|++ +|++++||.
T Consensus         2 ~H~~~H~~~~~~~C~~C~k~-------F~~~~~L~~H~~-~H~~~~~~~   42 (44)
T 2eox_A            2 SSGSSGTDSKSYNCNECGKA-------FTRIFHLTRHQK-IHTRKSGPS   42 (44)
T ss_dssp             CCCCCCCCCCCEEETTTTEE-------ESSSHHHHTTHH-HHCCCCCCS
T ss_pred             CCCcCCCCCCCeECcccCcc-------cCCHHHHHHHHH-HhCCCCCCC
Confidence            47889999999999966655       999999999999 999999993

>2en3_A ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=98.90  E-value=5.2e-11  Score=67.75  Aligned_cols=41  Identities=10%  Similarity=0.088  Sum_probs=36.9

Q ss_pred             HHHHhhcCCCCCCCCCCCCCCCCCCccCCCCChhhhccccccCCCCCCC
Q 044013           43 GHMNIHRKDRAKNRPPSSSSISDKLTFFPSPSTWDDHQRSVHTNNNNHS   91 (153)
Q Consensus        43 ~H~r~H~gekp~~C~~c~~~~Cgk~~~F~~~~~L~~H~~~~Ht~~kp~~   91 (153)
                      .|+++|++++||.|..|++.       |.....|..|++ +|++++||.
T Consensus         2 ~H~~~H~~~k~~~C~~C~k~-------F~~~~~L~~H~~-~H~~~~~~~   42 (46)
T 2en3_A            2 SSGSSGTGEKPFQCKECGMN-------FSWSCSLFKHLR-SHERTDPSG   42 (46)
T ss_dssp             CCCCCSCCCCSEECSSSCCE-------ESSSHHHHHHHH-HHHHSCCSS
T ss_pred             ccccccCCCCCeeCcccChh-------hCCHHHHHHHHH-HhCCCCCCC
Confidence            47889999999999966666       999999999999 999999993

>2elx_A Zinc finger protein 406; ZFAT zinc finger 1, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Mus musculus}

Probab=98.89  E-value=1.2e-09  Score=57.95  Aligned_cols=32  Identities=19%  Similarity=0.449  Sum_probs=29.0

Q ss_pred             CCcceeccccccccCChhHHHHHHHhhcCCCC
Q 044013           22 TGRSYECVFCKRGFTTAQALGGHMNIHRKDRA   53 (153)
Q Consensus        22 gekp~~C~~Cgk~F~~~~~L~~H~r~H~gekp   53 (153)
                      +++||.|.+|++.|.....|..|+++|++++|
T Consensus         4 ~~k~~~C~~C~k~f~~~~~L~~H~~~h~~~kp   35 (35)
T 2elx_A            4 GSSGYVCALCLKKFVSSIRLRSHIREVHGAAQ   35 (35)
T ss_dssp             CCCSEECSSSCCEESSHHHHHHHHHHTSCTTC
T ss_pred             CCCCeECCCCcchhCCHHHHHHHHHHHcCCCC
Confidence            57899999999999999999999999998876

>2eom_A ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=98.89  E-value=2.4e-10  Score=65.09  Aligned_cols=42  Identities=17%  Similarity=0.230  Sum_probs=36.4

Q ss_pred             HHHhhcCCCCCCCCCCCCCCCCCCccCCCCChhhhccccccCCCCCCCCCC
Q 044013           44 HMNIHRKDRAKNRPPSSSSISDKLTFFPSPSTWDDHQRSVHTNNNNHSNYD   94 (153)
Q Consensus        44 H~r~H~gekp~~C~~c~~~~Cgk~~~F~~~~~L~~H~~~~Ht~~kp~~~~~   94 (153)
                      ++++|++++||.|..|++.       |.+...|..|++ +|++++|| .|.
T Consensus         3 ~~~~h~~~k~~~C~~C~k~-------F~~~~~L~~H~~-~H~~~k~~-~C~   44 (46)
T 2eom_A            3 SGSSGHGERGHRCSDCGKF-------FLQASNFIQHRR-IHTGEKPS-GPS   44 (46)
T ss_dssp             CCCCCCCCSSCCCSSSCCC-------CSSHHHHHHHHH-HHSSCCCS-SCC
T ss_pred             CCCCCCCCCCcCCCCCCCe-------eCChHHHHHHHH-HhCCCCCC-CCC
Confidence            3578999999999966665       999999999999 99999999 454

>1srk_A Zinc finger protein ZFPM1; classical zinc finger, transcription; NMR {Mus musculus} SCOP: g.37.1.1

Probab=98.89  E-value=1.3e-09  Score=58.00  Aligned_cols=32  Identities=25%  Similarity=0.556  Sum_probs=28.9

Q ss_pred             CCcceeccccccccCChhHHHHHHHhhcCCCC
Q 044013           22 TGRSYECVFCKRGFTTAQALGGHMNIHRKDRA   53 (153)
Q Consensus        22 gekp~~C~~Cgk~F~~~~~L~~H~r~H~gekp   53 (153)
                      +++||.|.+|++.|.....|..|+++|++++|
T Consensus         4 ~~k~~~C~~C~k~f~~~~~l~~H~~~H~~~~~   35 (35)
T 1srk_A            4 GKRPFVCRICLSAFTTKANCARHLKVHTDTLS   35 (35)
T ss_dssp             CCSCEECSSSCCEESSHHHHHHHHGGGTSCCC
T ss_pred             CCcCeeCCCCCcccCCHHHHHHHHHHcCCCCC
Confidence            58899999999999999999999999998876

>2epq_A POZ-, at HOOK-, and zinc finger-containing protein 1; C2H2, zinc finger domain, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: g.37.1.1

Probab=98.88  E-value=2e-10  Score=64.99  Aligned_cols=43  Identities=16%  Similarity=0.166  Sum_probs=37.9

Q ss_pred             HhhcCCCCCCCCCCCCCCCCCCccCCCCChhhhccccccCCCCCCCCCCCCc
Q 044013           46 NIHRKDRAKNRPPSSSSISDKLTFFPSPSTWDDHQRSVHTNNNNHSNYDSYG   97 (153)
Q Consensus        46 r~H~gekp~~C~~c~~~~Cgk~~~F~~~~~L~~H~~~~Ht~~kp~~~~~~~~   97 (153)
                      .+|++++||.|..|++.       |.....|..|++ +|++++|| .|..|+
T Consensus         3 ~~h~~~k~~~C~~C~k~-------f~~~~~l~~H~~-~H~~~~~~-~C~~cg   45 (45)
T 2epq_A            3 SGSSGEKPYSCPVCGLR-------FKRKDRMSYHVR-SHDGSVGK-SGPSSG   45 (45)
T ss_dssp             CCCSSCCSSEETTTTEE-------CSCHHHHHHHHH-HHSCCCCC-CCCCCC
T ss_pred             CCcCCCCCCcCCCCCcc-------cCCHHHHHHHHH-HccCCCCC-CCcCCC
Confidence            36899999999966665       999999999999 99999999 788775

>1p7a_A BF3, BKLF, kruppel-like factor 3; classical zinc finger, transcription factor, DNA binding protein; NMR {Mus musculus} SCOP: g.37.1.1 PDB: 1u85_A 1u86_A

Probab=98.88  E-value=1.5e-09  Score=58.51  Aligned_cols=36  Identities=22%  Similarity=0.434  Sum_probs=24.3

Q ss_pred             cccccCCCCcceeccccccccCChhHHHHHHHhhcCC
Q 044013           15 DDETDAGTGRSYECVFCKRGFTTAQALGGHMNIHRKD   51 (153)
Q Consensus        15 h~~~~~~gekp~~C~~Cgk~F~~~~~L~~H~r~H~ge   51 (153)
                      |++.+++ ++||.|++|++.|.....|..|+++|+++
T Consensus         2 H~~~h~~-~k~~~C~~C~k~f~~~~~l~~H~~~H~~~   37 (37)
T 1p7a_A            2 STRGSTG-IKPFQCPDCDRSFSRSDHLALHRKRHMLV   37 (37)
T ss_dssp             CSSTTCC-SSSBCCTTTCCCBSSHHHHHHHHGGGTCC
T ss_pred             CCCcCCC-CCCccCCCCCcccCcHHHHHHHHHHhccC
Confidence            4455544 66777777777777777777777777653

>2ghf_A ZHX1, zinc fingers and homeoboxes protein 1; C2H2 zinc fingers, 4-stranded parallel/anti-parallel beta- sheet, structural genomics; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1

Probab=98.87  E-value=1.6e-10  Score=77.91  Aligned_cols=49  Identities=18%  Similarity=0.192  Sum_probs=41.4

Q ss_pred             CCCcccc-cC--CCCcceeccccccccCChhHHHHH-HHhhcCCCCCCCCCCC
Q 044013           12 SSSDDET-DA--GTGRSYECVFCKRGFTTAQALGGH-MNIHRKDRAKNRPPSS   60 (153)
Q Consensus        12 ~~~h~~~-~~--~gekp~~C~~Cgk~F~~~~~L~~H-~r~H~gekp~~C~~c~   60 (153)
                      |..|++. ++  .+++||.|.+|++.|.....|..| +++|++++||.|..+.
T Consensus        34 L~~H~r~~H~~~~~ekpf~C~~Cgk~F~~~~~L~~H~~r~Htgekpy~C~~~~   86 (102)
T 2ghf_A           34 FTFHVDSEHPNVVLNSSYVCVECNFLTKRYDALSEHNLKYHPGEENFKLTMVK   86 (102)
T ss_dssp             HHHHHHHHCSSCCCSCCEEETTTTEEESSTHHHHTHHHHTSTTCCCEEEEECC
T ss_pred             HHHHHHhhCCCCCCCCCcCCCCCCcccCCHHHHHHHHHHhcCCCCCeeCCccc
Confidence            5566653 53  358999999999999999999999 8999999999998543

>2ent_A Krueppel-like factor 15; zinc binding, transcription factor, adipogenesis, CLCNKA, chloride channel Ka, rhodopsin, IRBP; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=98.87  E-value=2.4e-10  Score=65.30  Aligned_cols=44  Identities=11%  Similarity=0.064  Sum_probs=38.8

Q ss_pred             HHHhhcCCCCCCCC--CCCCCCCCCCccCCCCChhhhccccccCCCCCCCCCCCC
Q 044013           44 HMNIHRKDRAKNRP--PSSSSISDKLTFFPSPSTWDDHQRSVHTNNNNHSNYDSY   96 (153)
Q Consensus        44 H~r~H~gekp~~C~--~c~~~~Cgk~~~F~~~~~L~~H~~~~Ht~~kp~~~~~~~   96 (153)
                      |.++|++++||.|.  .|++.       |.....|..|++ +|++++|| .|..|
T Consensus         3 ~~~~H~~~k~~~C~~~~C~k~-------f~~~~~L~~H~~-~H~~~k~~-~C~~C   48 (48)
T 2ent_A            3 SGSSGTGEKPFACTWPGCGWR-------FSRSDELSRHRR-SHSGVKPS-GPSSG   48 (48)
T ss_dssp             CCCSSCCCCCEECCSSSCCCE-------ESSHHHHHHHHT-TSCCCCSC-SSCCC
T ss_pred             CCCCcCCCCCeECCCCCCCCc-------cCCHHHHHHHHH-HhCCCCCC-CCCCC
Confidence            56789999999997  67777       999999999999 99999999 67665

>2lv2_A Insulinoma-associated protein 1; structural genomics, northeast structural genomics consortiu PSI-biology, protein structure initiative; NMR {Homo sapiens}

Probab=98.86  E-value=1.1e-10  Score=76.14  Aligned_cols=57  Identities=12%  Similarity=0.167  Sum_probs=47.2

Q ss_pred             HHhhcCCCCCCCCCCCCCCCCCCccCCCCChhhhccccccCCCCCCCCCCCCccccccCCcccchhh
Q 044013           45 MNIHRKDRAKNRPPSSSSISDKLTFFPSPSTWDDHQRSVHTNNNNHSNYDSYGQNYHQHLNMIGDEI  111 (153)
Q Consensus        45 ~r~H~gekp~~C~~c~~~~Cgk~~~F~~~~~L~~H~~~~Ht~~kp~~~~~~~~~~f~~~~~~~~~~~  111 (153)
                      +.++...++|.|+.|++.       |.+...|..|++ +|++++|| .|..|+++|.+... +..++
T Consensus        20 ~~~~~~~~~h~C~~Cgk~-------F~~~~~L~~H~~-~H~~~k~~-~C~~C~k~F~~~~~-L~~H~   76 (85)
T 2lv2_A           20 LGLSASAECHLCPVCGES-------FASKGAQERHLR-LLHAAQVF-PCKYCPATFYSSPG-LTRHI   76 (85)
T ss_dssp             CSSCCCCTTEECTTSCCE-------ESSHHHHHHHHH-TTSCSSSE-ECTTSSCEESSHHH-HHHHH
T ss_pred             CCCCCCCCCEECCCCCCC-------cCcHHHHhhhhh-hccCCCcc-CCCCCCCEeCCHHH-HHHhC
Confidence            346778899999965555       999999999999 99999999 79999999976555 55543

>2drp_A Protein (tramtrack DNA-binding domain); protein-DNA complex, double helix, transcription/DNA complex; HET: DNA; 2.80A {Drosophila melanogaster} SCOP: g.37.1.1 g.37.1.1

Probab=98.85  E-value=1.4e-10  Score=70.70  Aligned_cols=52  Identities=12%  Similarity=0.019  Sum_probs=44.0

Q ss_pred             HHhhcCCCCCCCCCCCCCCCCCCccCCCCChhhhccccc-c-CCCCCCCCCCCCccccccCCc
Q 044013           45 MNIHRKDRAKNRPPSSSSISDKLTFFPSPSTWDDHQRSV-H-TNNNNHSNYDSYGQNYHQHLN  105 (153)
Q Consensus        45 ~r~H~gekp~~C~~c~~~~Cgk~~~F~~~~~L~~H~~~~-H-t~~kp~~~~~~~~~~f~~~~~  105 (153)
                      +++|++++||.|+.|++.       |.....|..|++ + | ++++|| .|..|++.|.+...
T Consensus         2 ~~~h~~~k~~~C~~C~k~-------f~~~~~l~~H~~-~~H~~~~~~~-~C~~C~k~f~~~~~   55 (66)
T 2drp_A            2 EFTKEGEHTYRCKVCSRV-------YTHISNFCRHYV-TSHKRNVKVY-PCPFCFKEFTRKDN   55 (66)
T ss_dssp             -CEEEETTEEECTTTCCE-------ESSHHHHHHHHH-HHSSSSCCCE-ECTTTCCEESCHHH
T ss_pred             ccccCCCcceECCCCcch-------hCCHHHHHHHHH-HHcCCCCcCe-ECCCCCCccCCHHH
Confidence            368999999999966666       999999999999 6 8 699999 79999999965444

>2eln_A Zinc finger protein 406; ZFAT zinc finger 1, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=98.84  E-value=2.1e-09  Score=59.62  Aligned_cols=32  Identities=19%  Similarity=0.384  Sum_probs=28.5

Q ss_pred             CCCCcceeccc--cccccCChhHHHHHHHhhcCC
Q 044013           20 AGTGRSYECVF--CKRGFTTAQALGGHMNIHRKD   51 (153)
Q Consensus        20 ~~gekp~~C~~--Cgk~F~~~~~L~~H~r~H~ge   51 (153)
                      ..+++||.|++  |+++|...+.|..|+++|+++
T Consensus         4 ~~gekp~~C~~~~C~k~F~~~~~L~~H~r~Htg~   37 (38)
T 2eln_A            4 GSSGILLKCPTDGCDYSTPDKYKLQAHLKVHTAL   37 (38)
T ss_dssp             SSCCCCEECSSSSCCCEESCHHHHHHHHHHHSCC
T ss_pred             CCCCCCCCCCCCCCCCccCCHHHHHHHHHhcCCC
Confidence            34689999986  999999999999999999986

>2lce_A B-cell lymphoma 6 protein; structural genomics, northeast structural genomics consortiu PSI-biology, protein structure initiative; NMR {Homo sapiens}

Probab=98.84  E-value=5.4e-10  Score=69.76  Aligned_cols=42  Identities=24%  Similarity=0.525  Sum_probs=37.7

Q ss_pred             CCCcccccCCCCcceeccccccccCChhHHHHHHHhhcCCCCC
Q 044013           12 SSSDDETDAGTGRSYECVFCKRGFTTAQALGGHMNIHRKDRAK   54 (153)
Q Consensus        12 ~~~h~~~~~~gekp~~C~~Cgk~F~~~~~L~~H~r~H~gekp~   54 (153)
                      |..|++.+++ ++||.|.+|++.|.....|..|+++|++++||
T Consensus        33 l~~H~~~H~~-~~~~~C~~C~k~f~~~~~L~~H~~~H~~~kp~   74 (74)
T 2lce_A           33 LASHKTVHTG-EKPYRCNICGAQFNRPANLKTHTRIHSGEKPY   74 (74)
T ss_dssp             HHHHHHHHCC-CCSEECTTTCCEESCHHHHHHHHHHHCCSCCC
T ss_pred             HHHHHHHcCC-CCCEECCCCCchhCCHHHHHHHHHhcCCCCCC
Confidence            5567777665 88999999999999999999999999999997

>2ept_A Zinc finger protein 32; C2H2, zinc finger domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=98.83  E-value=4.9e-10  Score=62.03  Aligned_cols=38  Identities=21%  Similarity=0.256  Sum_probs=34.0

Q ss_pred             HhhcCCCCCCCCCCCCCCCCCCccCCCCChhhhccccccCCCCCCC
Q 044013           46 NIHRKDRAKNRPPSSSSISDKLTFFPSPSTWDDHQRSVHTNNNNHS   91 (153)
Q Consensus        46 r~H~gekp~~C~~c~~~~Cgk~~~F~~~~~L~~H~~~~Ht~~kp~~   91 (153)
                      ++|++++||.|+.|++.       |.....|..|++ +|++++||.
T Consensus         3 ~~h~~~k~~~C~~C~k~-------f~~~~~L~~H~~-~H~~~k~~~   40 (41)
T 2ept_A            3 SGSSGQRVYECQECGKS-------FRQKGSLTLHER-IHTGSGPSS   40 (41)
T ss_dssp             SSCCCCCCEECSSSCCE-------ESSHHHHHHHGG-GCCCCSCSC
T ss_pred             CccCCCCCeECCCCCCC-------cCCHHHHHHHHH-HhCCCCCcC
Confidence            57999999999966666       999999999999 999999993

>2yrm_A B-cell lymphoma 6 protein; ZF-C2H2, zinc binding, DNA binding, structural genomics, NPPSFA; NMR {Homo sapiens}

Probab=98.83  E-value=7.1e-10  Score=62.22  Aligned_cols=40  Identities=8%  Similarity=0.011  Sum_probs=35.0

Q ss_pred             HhhcCCCCCCCCCCCCCCCCCCccCCCCChhhhccccccCCCCCCCCCC
Q 044013           46 NIHRKDRAKNRPPSSSSISDKLTFFPSPSTWDDHQRSVHTNNNNHSNYD   94 (153)
Q Consensus        46 r~H~gekp~~C~~c~~~~Cgk~~~F~~~~~L~~H~~~~Ht~~kp~~~~~   94 (153)
                      ++|++++||.|..|++.       |.....|..|++ +|++++|| .|.
T Consensus         3 ~~h~~~k~~~C~~C~k~-------f~~~~~L~~H~~-~H~~~k~~-~C~   42 (43)
T 2yrm_A            3 SGSSGNGAFFCNECDCR-------FSEEASLKRHTL-QTHSDKSG-PSS   42 (43)
T ss_dssp             SCCSSSCCBCCSSSCCC-------BSSHHHHHHHHH-HHTCTTCS-SSC
T ss_pred             cCcCCCCCEECCCCCCe-------eCChHHHHHHHH-hhCCCCCc-cCC
Confidence            57899999999966666       999999999999 99999999 443

>2epr_A POZ-, at HOOK-, and zinc finger-containing protein 1; C2H2, zinc finger domain, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: g.37.1.1

Probab=98.82  E-value=5.3e-10  Score=64.25  Aligned_cols=43  Identities=9%  Similarity=0.056  Sum_probs=38.0

Q ss_pred             hhcCCCCCCCCCCCCCCCCCCccCCCCChhhhccccccCCCCCCCCCCCCcc
Q 044013           47 IHRKDRAKNRPPSSSSISDKLTFFPSPSTWDDHQRSVHTNNNNHSNYDSYGQ   98 (153)
Q Consensus        47 ~H~gekp~~C~~c~~~~Cgk~~~F~~~~~L~~H~~~~Ht~~kp~~~~~~~~~   98 (153)
                      .|++++||.|..|++.       |.....|..|++ +|++++|| .|.+|++
T Consensus         6 ~~~~~k~~~C~~C~k~-------f~~~~~L~~H~~-~H~~~k~~-~C~~C~k   48 (48)
T 2epr_A            6 SGRTRKQVACEICGKI-------FRDVYHLNRHKL-SHSGEKPY-SSGPSSG   48 (48)
T ss_dssp             CCCCCCSEEETTTTEE-------ESSHHHHHHHGG-GSCSCCCC-CSCCCCC
T ss_pred             CCCCCcCeeCCCCCcc-------cCCHHHHHHHHH-hcCCCCCc-cCCCCCC
Confidence            4788999999965555       999999999999 99999999 7899875

>2epu_A Zinc finger protein 32; C2H2, zinc finger domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=98.82  E-value=2.2e-10  Score=64.88  Aligned_cols=42  Identities=17%  Similarity=0.177  Sum_probs=36.3

Q ss_pred             HHHhhcCCCCCCCCCCCCCCCCCCccCCCCChhhhccccccCCCCCCCCCC
Q 044013           44 HMNIHRKDRAKNRPPSSSSISDKLTFFPSPSTWDDHQRSVHTNNNNHSNYD   94 (153)
Q Consensus        44 H~r~H~gekp~~C~~c~~~~Cgk~~~F~~~~~L~~H~~~~Ht~~kp~~~~~   94 (153)
                      +.++|++++||.|..|++.       |.....|..|++ +|++++|| .|+
T Consensus         3 ~~~~h~~~k~~~C~~C~k~-------F~~~~~L~~H~~-~H~~~k~~-~C~   44 (45)
T 2epu_A            3 SGSSGTGQKPFECTHCGKS-------FRAKGNLVTHQR-IHTGEKSG-PSS   44 (45)
T ss_dssp             CCCCCCSCCSEEETTTTEE-------ESSHHHHHHHHT-TTSSCCCC-CSC
T ss_pred             CCCCCCCCcCccCCCCCCc-------cCChHHHHHHHH-HhCCCCCC-CCC
Confidence            4568999999999966665       999999999999 99999999 453

>1bhi_A CRE-BP1, ATF-2; CRE binding protein, transcriptional activation domain, Zn finger, DNA-binding regulatory protein; NMR {Homo sapiens} SCOP: g.37.1.1

Probab=98.81  E-value=3.1e-09  Score=57.62  Aligned_cols=34  Identities=21%  Similarity=0.366  Sum_probs=31.0

Q ss_pred             CCcceecc--ccccccCChhHHHHHHHhhcCCCCCC
Q 044013           22 TGRSYECV--FCKRGFTTAQALGGHMNIHRKDRAKN   55 (153)
Q Consensus        22 gekp~~C~--~Cgk~F~~~~~L~~H~r~H~gekp~~   55 (153)
                      +++||.|.  .|++.|.....|..|+++|++++||.
T Consensus         3 ~~k~~~C~~~~C~k~f~~~~~L~~H~~~H~~~k~~~   38 (38)
T 1bhi_A            3 DDKPFLCTAPGCGQRFTNEDHLAVHKHKHEMTLKFG   38 (38)
T ss_dssp             TCCCEECCCTTTCCEESSHHHHHHHHHHHHTTTTTC
T ss_pred             CCcceECCCCCCCcccCCHHHHHHHHHHhCCCCCCC
Confidence            58899999  59999999999999999999999873

>1llm_C Chimera of ZIF23-GCN4; dimerization, DNA recognition, leucine zipper, X-RAY crystallography, structure-based design, zinc fingers; 1.50A {Mus musculus} SCOP: g.37.1.1 g.37.1.1 PDB: 1xf7_A

Probab=98.81  E-value=4.3e-12  Score=82.11  Aligned_cols=61  Identities=13%  Similarity=0.251  Sum_probs=53.2

Q ss_pred             CCCcccccCCCCcceeccccccccCChhHHHHHHHhhcCCCCCCCCCCCCCCCCCCccCCCCChhhhccc
Q 044013           12 SSSDDETDAGTGRSYECVFCKRGFTTAQALGGHMNIHRKDRAKNRPPSSSSISDKLTFFPSPSTWDDHQR   81 (153)
Q Consensus        12 ~~~h~~~~~~gekp~~C~~Cgk~F~~~~~L~~H~r~H~gekp~~C~~c~~~~Cgk~~~F~~~~~L~~H~~   81 (153)
                      |..|++.+++ ++||.|.+|++.|.....|..|+++|.+ .||.|+.|++.       |.....|..|++
T Consensus        19 L~~H~~~H~~-~~~~~C~~C~k~f~~~~~L~~H~~~h~~-~~~~c~~C~~~-------f~~~~~L~~H~~   79 (88)
T 1llm_C           19 LTTHIRTHTG-EKPFACDICGRKFARSDERKRHRDIQHI-LPILEDKVEEL-------LSKNYHLENEVA   79 (88)
T ss_dssp             HHHHHHHHHC-CCCEECTTTCCEESSHHHHHHHHHHHTH-HHHHHHHHHHH-------HHHHHHHHHHHH
T ss_pred             HHHHHHHcCC-CCCccCCCCCCccCCHHHHHHHHHHhCC-CcchHHHHHHH-------HHHHhhhHHHHH
Confidence            5667777665 8899999999999999999999999985 88999955555       999999999987

>1x6h_A Transcriptional repressor CTCF; zinc finger protein, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1

Probab=98.80  E-value=1.8e-09  Score=68.64  Aligned_cols=51  Identities=14%  Similarity=0.193  Sum_probs=43.0

Q ss_pred             CCCcccccCCCC---cceeccccccccCChhHHHHHHHhhcCCCCCCCCCCCCC
Q 044013           12 SSSDDETDAGTG---RSYECVFCKRGFTTAQALGGHMNIHRKDRAKNRPPSSSS   62 (153)
Q Consensus        12 ~~~h~~~~~~ge---kp~~C~~Cgk~F~~~~~L~~H~r~H~gekp~~C~~c~~~   62 (153)
                      |..|++.+....   +||.|.+|++.|.....|..|+++|++++++.|..|+.+
T Consensus        31 l~~H~~~~~~~~~~~~~~~C~~C~~~f~~~~~L~~H~~~h~~~~~~~~~~~~~~   84 (86)
T 1x6h_A           31 LDMHFKRYHDPNFVPAAFVCSKCGKTFTRRNTMARHADNCAGPDGVEGENSGPS   84 (86)
T ss_dssp             HHHHHHHTTCSSCCCCCEECSSSCCEESCHHHHHHHHHHCCCCCSCCCCCCCCC
T ss_pred             HHHHHHHhcCCcCCCcceECCCCCChhCCHHHHHHHHHHccCCCCcccCCCCCC
Confidence            455665555543   899999999999999999999999999999999977655

>2ej4_A Zinc finger protein ZIC 3; ZF-C2H2 domain, zinc binding, structural genomics, NPPSFA; NMR {Homo sapiens}

Probab=98.80  E-value=8.9e-10  Score=71.63  Aligned_cols=46  Identities=15%  Similarity=0.238  Sum_probs=39.1

Q ss_pred             CCCcccccCCCCcc--------eeccccccccCChhHHHHHHHhhcCCCCCCCC
Q 044013           12 SSSDDETDAGTGRS--------YECVFCKRGFTTAQALGGHMNIHRKDRAKNRP   57 (153)
Q Consensus        12 ~~~h~~~~~~gekp--------~~C~~Cgk~F~~~~~L~~H~r~H~gekp~~C~   57 (153)
                      |..|++....+++|        |.|.+|++.|.....|..|+++|++++||.|.
T Consensus        41 L~~H~~~~H~~~~~~~~~~c~~~~C~~C~k~f~~~~~L~~H~~~H~~~k~~~C~   94 (95)
T 2ej4_A           41 LVTHVTMEHVGGPEQNNHVCYWEECPREGKSFKAKYKLVNHIRVHTGEKSGPSS   94 (95)
T ss_dssp             HHHHHHHTTTCCTTCSCCCCCCTTCSSTTCCCSSHHHHHHHHHHHHTCCCCSSC
T ss_pred             HHHHHHHhccCCCCCCccceeccCCCCCCcccCCHHHHHHHHHhcCCCCCCCCC
Confidence            55666663344666        99999999999999999999999999999996

>2kfq_A FP1; protein, de novo protein; NMR {Synthetic}

Probab=98.78  E-value=2.8e-10  Score=59.94  Aligned_cols=31  Identities=23%  Similarity=0.391  Sum_probs=19.7

Q ss_pred             cceeccccccccCChhHHHHHHHhhcCCCCC
Q 044013           24 RSYECVFCKRGFTTAQALGGHMNIHRKDRAK   54 (153)
Q Consensus        24 kp~~C~~Cgk~F~~~~~L~~H~r~H~gekp~   54 (153)
                      +||.|.+|++.|.....|..|+++|++++||
T Consensus         1 kp~~C~~C~k~f~~~~~L~~H~~~H~~~kp~   31 (32)
T 2kfq_A            1 YAFACPACPKRFMRSDALSKHIKTAFIVVAL   31 (32)
T ss_dssp             CCSSSSSSCTTHHHHHTTSSSTTSSSSSSSC
T ss_pred             CCCCCCCCCcccCCHHHHHHHHHHHccCCCC
Confidence            3566666666666666666666666666665

>1x5w_A Zinc finger protein 64, isoforms 1; ZNF338, nuclear protein, DNA binding, transcription, C2H2 type zinc finger, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1

Probab=98.78  E-value=8.1e-10  Score=68.21  Aligned_cols=54  Identities=15%  Similarity=0.171  Sum_probs=45.3

Q ss_pred             hhcCCCCCCCCCCCCCCCCCCccCCCCChhhhccccccCCCCCCCCCCCCccccccCCcccchh
Q 044013           47 IHRKDRAKNRPPSSSSISDKLTFFPSPSTWDDHQRSVHTNNNNHSNYDSYGQNYHQHLNMIGDE  110 (153)
Q Consensus        47 ~H~gekp~~C~~c~~~~Cgk~~~F~~~~~L~~H~~~~Ht~~kp~~~~~~~~~~f~~~~~~~~~~  110 (153)
                      .|++++||.|..|++.       |.....|..|++ +|++++|| .|..|++.|.+... +..+
T Consensus         3 s~~~~~~~~C~~C~k~-------f~~~~~L~~H~~-~H~~~~~~-~C~~C~~~f~~~~~-L~~H   56 (70)
T 1x5w_A            3 SGSSGHPEKCSECSYS-------CSSKAALRIHER-IHCTDRPF-KCNYCSFDTKQPSN-LSKH   56 (70)
T ss_dssp             SCCCCCSEECSSSSCE-------ESSHHHHHHHHG-GGCCSCSE-ECSSSSCEESSHHH-HHHH
T ss_pred             CCCCCCCeECCCCCcc-------cCCHHHHHHHHH-HcCCCCCE-eCCCCCCccCCHHH-HHHH
Confidence            5788999999966665       999999999999 99999999 79999999965444 4443

>3uk3_C Zinc finger protein 217; transcription factor, DNA binding, DNA-metal BI protein complex; 2.10A {Homo sapiens}

Probab=98.77  E-value=8.2e-10  Score=65.22  Aligned_cols=47  Identities=15%  Similarity=0.084  Sum_probs=37.6

Q ss_pred             CCCCCCCCCCCCCCCCCCccCCCCChhhhccccccCCCCCCCCCCCCccccccCCc
Q 044013           50 KDRAKNRPPSSSSISDKLTFFPSPSTWDDHQRSVHTNNNNHSNYDSYGQNYHQHLN  105 (153)
Q Consensus        50 gekp~~C~~c~~~~Cgk~~~F~~~~~L~~H~~~~Ht~~kp~~~~~~~~~~f~~~~~  105 (153)
                      |++||.|+.|++.       |.....|..|++ +|++++|| .|..|++.|.+...
T Consensus         1 g~~~~~C~~C~~~-------f~~~~~l~~H~~-~h~~~~~~-~C~~C~~~f~~~~~   47 (57)
T 3uk3_C            1 GSSSRECSYCGKF-------FRSNYYLNIHLR-THTGEKPY-KCEFCEYAAAQKTS   47 (57)
T ss_dssp             ----CBCTTTCCB-------CSCHHHHHHHHH-HHHCCCCE-ECSSSSCEESSHHH
T ss_pred             CCCCccCCCCcch-------hCChHHHHHHHH-HcCCCCCc-CCCCCcchhCCHHH
Confidence            5789999966666       999999999999 99999999 79999999965444

>2elv_A Zinc finger protein 406; ZFAT zinc finger 1, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=98.76  E-value=4.9e-09  Score=56.14  Aligned_cols=31  Identities=29%  Similarity=0.630  Sum_probs=27.4

Q ss_pred             CCcceeccccccccCChhHHHHHHHhhcCCC
Q 044013           22 TGRSYECVFCKRGFTTAQALGGHMNIHRKDR   52 (153)
Q Consensus        22 gekp~~C~~Cgk~F~~~~~L~~H~r~H~gek   52 (153)
                      +++||.|.+|++.|.....|..|+++|++++
T Consensus         6 ~~k~~~C~~C~k~f~~~~~l~~H~~~H~~~k   36 (36)
T 2elv_A            6 SGLLYDCHICERKFKNELDRDRHMLVHGDKW   36 (36)
T ss_dssp             CCCCEECSSSCCEESSHHHHHHHHTTTSTTC
T ss_pred             CCCCeECCCCCCccCCHHHHHHHHHHhcCCC
Confidence            5789999999999999999999999998764

>2elt_A Zinc finger protein 406; ZFAT zinc finger 1, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=98.76  E-value=6.4e-09  Score=55.51  Aligned_cols=31  Identities=23%  Similarity=0.561  Sum_probs=28.2

Q ss_pred             CCcceeccccccccCChhHHHHHHHhhcCCC
Q 044013           22 TGRSYECVFCKRGFTTAQALGGHMNIHRKDR   52 (153)
Q Consensus        22 gekp~~C~~Cgk~F~~~~~L~~H~r~H~gek   52 (153)
                      +++||.|.+|++.|.....|..|+++|++++
T Consensus         6 ~~k~~~C~~C~k~f~~~~~l~~H~~~H~~~k   36 (36)
T 2elt_A            6 SGKPYKCPQCSYASAIKANLNVHLRKHTGEK   36 (36)
T ss_dssp             CCCSEECSSSSCEESSHHHHHHHHHHHTCCC
T ss_pred             CCCCCCCCCCCcccCCHHHHHHHHHHccCCC
Confidence            4789999999999999999999999999874

>2elr_A Zinc finger protein 406; ZFAT zinc finger 1, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=98.74  E-value=7.4e-09  Score=55.26  Aligned_cols=32  Identities=25%  Similarity=0.568  Sum_probs=27.8

Q ss_pred             CCCcceeccccccccCChhHHHHHHHhhcCCC
Q 044013           21 GTGRSYECVFCKRGFTTAQALGGHMNIHRKDR   52 (153)
Q Consensus        21 ~gekp~~C~~Cgk~F~~~~~L~~H~r~H~gek   52 (153)
                      .+++||.|.+|++.|.....|..|+++|++++
T Consensus         5 ~~~~~~~C~~C~k~f~~~~~l~~H~~~H~~ek   36 (36)
T 2elr_A            5 SSGKTHLCDMCGKKFKSKGTLKSHKLLHTADG   36 (36)
T ss_dssp             CCCSSCBCTTTCCBCSSHHHHHHHHHHHSSCC
T ss_pred             CCCCCeecCcCCCCcCchHHHHHHHHHhcCCC
Confidence            34789999999999999999999999998874

>1p7a_A BF3, BKLF, kruppel-like factor 3; classical zinc finger, transcription factor, DNA binding protein; NMR {Mus musculus} SCOP: g.37.1.1 PDB: 1u85_A 1u86_A

Probab=98.74  E-value=1.6e-09  Score=58.43  Aligned_cols=36  Identities=14%  Similarity=0.082  Sum_probs=32.1

Q ss_pred             HHHhhcCCCCCCCCCCCCCCCCCCccCCCCChhhhccccccCCC
Q 044013           44 HMNIHRKDRAKNRPPSSSSISDKLTFFPSPSTWDDHQRSVHTNN   87 (153)
Q Consensus        44 H~r~H~gekp~~C~~c~~~~Cgk~~~F~~~~~L~~H~~~~Ht~~   87 (153)
                      |+++|++++||.|+.|++.       |.....|..|++ +|+++
T Consensus         2 H~~~h~~~k~~~C~~C~k~-------f~~~~~l~~H~~-~H~~~   37 (37)
T 1p7a_A            2 STRGSTGIKPFQCPDCDRS-------FSRSDHLALHRK-RHMLV   37 (37)
T ss_dssp             CSSTTCCSSSBCCTTTCCC-------BSSHHHHHHHHG-GGTCC
T ss_pred             CCCcCCCCCCccCCCCCcc-------cCcHHHHHHHHH-HhccC
Confidence            7889999999999966666       999999999999 99874

>2elq_A Zinc finger protein 406; ZFAT zinc finger 1, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=98.74  E-value=7.4e-09  Score=55.40  Aligned_cols=32  Identities=25%  Similarity=0.696  Sum_probs=28.2

Q ss_pred             CCCcceeccccccccCChhHHHHHHHhhcCCC
Q 044013           21 GTGRSYECVFCKRGFTTAQALGGHMNIHRKDR   52 (153)
Q Consensus        21 ~gekp~~C~~Cgk~F~~~~~L~~H~r~H~gek   52 (153)
                      .+++||.|.+|++.|.....|..|+++|++++
T Consensus         5 ~~~k~~~C~~C~k~f~~~~~l~~H~~~H~~~k   36 (36)
T 2elq_A            5 SSGKPFKCSLCEYATRSKSNLKAHMNRHSTEK   36 (36)
T ss_dssp             CCCCSEECSSSSCEESCHHHHHHHHHHSSTTC
T ss_pred             CCCCCccCCCCCchhCCHHHHHHHHHHhccCC
Confidence            35889999999999999999999999998764

>2els_A Zinc finger protein 406; ZFAT zinc finger 1, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=98.74  E-value=7.7e-09  Score=55.33  Aligned_cols=32  Identities=25%  Similarity=0.794  Sum_probs=28.8

Q ss_pred             CCCcceeccccccccCChhHHHHHHHhhcCCC
Q 044013           21 GTGRSYECVFCKRGFTTAQALGGHMNIHRKDR   52 (153)
Q Consensus        21 ~gekp~~C~~Cgk~F~~~~~L~~H~r~H~gek   52 (153)
                      .+++||.|.+|++.|.....|..|+++|++++
T Consensus         5 ~~~k~~~C~~C~k~f~~~~~l~~H~~~H~~~k   36 (36)
T 2els_A            5 SSGKIFTCEYCNKVFKFKHSLQAHLRIHTNEK   36 (36)
T ss_dssp             SCCCCEECTTTCCEESSHHHHHHHHHHHCCCC
T ss_pred             CCCCCEECCCCCceeCCHHHHHHHHHHhCCCC
Confidence            35789999999999999999999999999874

>2d9h_A Zinc finger protein 692; ZF-C2H2 domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=98.73  E-value=4.4e-10  Score=70.77  Aligned_cols=55  Identities=9%  Similarity=0.067  Sum_probs=45.8

Q ss_pred             hhcCCCCCCCCCCCCCCCCCCccCCCCChhhhccccccCC---CCCCCCCCCCccccccCCcccchhh
Q 044013           47 IHRKDRAKNRPPSSSSISDKLTFFPSPSTWDDHQRSVHTN---NNNHSNYDSYGQNYHQHLNMIGDEI  111 (153)
Q Consensus        47 ~H~gekp~~C~~c~~~~Cgk~~~F~~~~~L~~H~~~~Ht~---~kp~~~~~~~~~~f~~~~~~~~~~~  111 (153)
                      +|++++||.|..|++.       |.....|..|++ +|++   ++|| .|..|++.|.+... |..++
T Consensus         1 ~h~~~k~~~C~~C~k~-------f~~~~~L~~H~~-~h~~~~~~~~~-~C~~C~k~f~~~~~-L~~H~   58 (78)
T 2d9h_A            1 GSSGSSGLQCEICGFT-------CRQKASLNWHQR-KHAETVAALRF-PCEFCGKRFEKPDS-VAAHR   58 (78)
T ss_dssp             CCCSCCCEECSSSCCE-------ESSHHHHHHHHH-HHHHHTTTCCE-ECTTTCCEESSHHH-HHHHH
T ss_pred             CCCCCcCeECCCCCCe-------eCCHHHHHHHHH-HhhccCCCccc-CCCCCCchhCCHHH-HHHHH
Confidence            4889999999966655       999999999999 9996   8999 79999999966554 55544

>2elp_A Zinc finger protein 406; ZFAT zinc finger 1, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=98.72  E-value=8.4e-09  Score=55.53  Aligned_cols=31  Identities=26%  Similarity=0.558  Sum_probs=27.5

Q ss_pred             CCcceeccccccccCCh-hHHHHHHHhhcCCC
Q 044013           22 TGRSYECVFCKRGFTTA-QALGGHMNIHRKDR   52 (153)
Q Consensus        22 gekp~~C~~Cgk~F~~~-~~L~~H~r~H~gek   52 (153)
                      +++||.|.+|++.|... ..|..|+++|++++
T Consensus         6 ~~k~~~C~~C~k~f~~~~~~L~~H~~~H~~~k   37 (37)
T 2elp_A            6 SGRAMKCPYCDFYFMKNGSDLQRHIWAHEGVK   37 (37)
T ss_dssp             CCCCEECSSSSCEECSSCHHHHHHHHHHHTCC
T ss_pred             CCCCeECCCCChhhccCHHHHHHHHHhcCCCC
Confidence            48899999999999998 99999999998864

>2m0d_A Zinc finger and BTB domain-containing protein 17; C2H2 zinc fingers, transcription; NMR {Homo sapiens}

Probab=98.71  E-value=8.8e-09  Score=52.29  Aligned_cols=30  Identities=27%  Similarity=0.710  Sum_probs=27.3

Q ss_pred             CcceeccccccccCChhHHHHHHHhhcCCC
Q 044013           23 GRSYECVFCKRGFTTAQALGGHMNIHRKDR   52 (153)
Q Consensus        23 ekp~~C~~Cgk~F~~~~~L~~H~r~H~gek   52 (153)
                      ++||.|.+|++.|.....|..|+++|++++
T Consensus         1 ~k~~~C~~C~~~f~~~~~l~~H~~~h~~~k   30 (30)
T 2m0d_A            1 MKPYQCDYCGRSFSDPTSKMRHLETHDTDK   30 (30)
T ss_dssp             CCCEECTTTCCEESCHHHHHHHHHTTCCCC
T ss_pred             CcCccCCCCCcccCCHHHHHHHHHHhccCC
Confidence            478999999999999999999999999864

>2elo_A Zinc finger protein 406; ZFAT zinc finger 1, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=98.70  E-value=7.6e-10  Score=59.72  Aligned_cols=36  Identities=14%  Similarity=0.182  Sum_probs=32.2

Q ss_pred             HhhcCCCCCCCCCCCCCCCCCCccCCCCChhhhccccccCCCCC
Q 044013           46 NIHRKDRAKNRPPSSSSISDKLTFFPSPSTWDDHQRSVHTNNNN   89 (153)
Q Consensus        46 r~H~gekp~~C~~c~~~~Cgk~~~F~~~~~L~~H~~~~Ht~~kp   89 (153)
                      ++|++++||.|..|++.       |....+|..|++ +|++++|
T Consensus         2 ~~h~~~k~~~C~~C~k~-------f~~~~~l~~H~~-~h~~~kp   37 (37)
T 2elo_A            2 SSGSSGRSYSCPVCEKS-------FSEDRLIKSHIK-TNHPEVS   37 (37)
T ss_dssp             CCCCCCCCCEETTTTEE-------CSSHHHHHHHHH-HHCSSCC
T ss_pred             CCCCCCCCcCCCCCCCc-------cCCHHHHHHHHH-HHcCCCC
Confidence            57999999999966666       999999999999 9999886

>2ctu_A Zinc finger protein 483; zinc finger domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=98.69  E-value=9e-10  Score=67.89  Aligned_cols=37  Identities=11%  Similarity=0.212  Sum_probs=35.5

Q ss_pred             CcceeccccccccCChhHHHHHHHhhcCCCCCCCCCC
Q 044013           23 GRSYECVFCKRGFTTAQALGGHMNIHRKDRAKNRPPS   59 (153)
Q Consensus        23 ekp~~C~~Cgk~F~~~~~L~~H~r~H~gekp~~C~~c   59 (153)
                      ++||.|.+|++.|.....|..|+++|++++||.|+.|
T Consensus        37 ~~~~~C~~C~~~f~~~~~l~~H~~~H~~~~~~~C~~C   73 (73)
T 2ctu_A           37 RKTPMCEKCRKDSCQEAALNKDEGNESGKKTSGPSSG   73 (73)
T ss_dssp             SSSCCCHHHHHTCSCCCSSCCCSSCCCCCCCSSCCCC
T ss_pred             CCCCCCCCCChhhcCHHHHHHHHHhhcCCCCCCCCCC
Confidence            7899999999999999999999999999999999966

>1va1_A Transcription factor SP1; C2H2 type zinc finger, DNA-binding protein; NMR {Homo sapiens}

Probab=98.67  E-value=1.3e-08  Score=55.02  Aligned_cols=32  Identities=22%  Similarity=0.531  Sum_probs=28.6

Q ss_pred             CCCcceeccc--cccccCChhHHHHHHHhhcCCC
Q 044013           21 GTGRSYECVF--CKRGFTTAQALGGHMNIHRKDR   52 (153)
Q Consensus        21 ~gekp~~C~~--Cgk~F~~~~~L~~H~r~H~gek   52 (153)
                      .+++||.|.+  |++.|...+.|..|+++|++++
T Consensus         4 ~~~k~~~C~~~~C~k~f~~~~~L~~H~~~H~~ek   37 (37)
T 1va1_A            4 GKKKQHICHIQGCGKVYGKTSHLRAHLRWHTGER   37 (37)
T ss_dssp             SSCCCEECCSTTCCCEESCHHHHHHHHHHHHTTC
T ss_pred             CCCCCCCCCCCCCCCccCCHHHHHHHHHhcCCCC
Confidence            4589999995  9999999999999999999875

>1rik_A E6APC1 peptide; E6-binding domain, zinc finger, human papillomavirus, HPV E6 protein, de novo protein; NMR {Synthetic} SCOP: k.12.1.1 PDB: 1sp1_A 1va3_A

Probab=98.67  E-value=1.3e-08  Score=51.52  Aligned_cols=29  Identities=21%  Similarity=0.534  Sum_probs=26.4

Q ss_pred             cceeccccccccCChhHHHHHHHhhcCCC
Q 044013           24 RSYECVFCKRGFTTAQALGGHMNIHRKDR   52 (153)
Q Consensus        24 kp~~C~~Cgk~F~~~~~L~~H~r~H~gek   52 (153)
                      +||.|.+|++.|.....|..|+++|++++
T Consensus         1 k~~~C~~C~k~f~~~~~l~~H~~~H~~~k   29 (29)
T 1rik_A            1 YKFACPECPKRFMRSDHLTLHILLHENKK   29 (29)
T ss_dssp             CCEECSSSSCEESCSHHHHHHHTGGGSCC
T ss_pred             CCccCCCCCchhCCHHHHHHHHHHhcCCC
Confidence            58999999999999999999999999864

>1njq_A Superman protein; zinc-finger, peptide-zinc complex, beta-BETA-ALFA motif, metal binding protein; NMR {Synthetic} SCOP: g.37.1.3 PDB: 2l1o_A

Probab=98.65  E-value=3.4e-09  Score=57.96  Aligned_cols=36  Identities=17%  Similarity=0.183  Sum_probs=31.6

Q ss_pred             hcCCCCCCCCCCCCCCCCCCccCCCCChhhhccccccCCCCCCC
Q 044013           48 HRKDRAKNRPPSSSSISDKLTFFPSPSTWDDHQRSVHTNNNNHS   91 (153)
Q Consensus        48 H~gekp~~C~~c~~~~Cgk~~~F~~~~~L~~H~~~~Ht~~kp~~   91 (153)
                      |++++||.|..|++.       |...+.|..|++ +|++++||.
T Consensus         1 h~~~k~~~C~~C~k~-------f~~~~~L~~H~~-~H~~~k~~~   36 (39)
T 1njq_A            1 XWPPRSYTCSFCKRE-------FRSAQALGGHMN-VHRRDRARL   36 (39)
T ss_dssp             -CCSSSEECTTTCCE-------ESSHHHHHHHHH-TTCCSCTTT
T ss_pred             CCCCCceECCCCCcc-------cCCHHHHHHHHH-HcCCCccce
Confidence            678999999966666       999999999999 999999994

>2adr_A ADR1; transcription regulation, zinc finger,; NMR {Saccharomyces cerevisiae} SCOP: g.37.1.1 g.37.1.1

Probab=98.65  E-value=6.5e-09  Score=61.94  Aligned_cols=49  Identities=14%  Similarity=0.135  Sum_probs=40.9

Q ss_pred             CCCCCCCCCCCCCCCCccCCCCChhhhccccccCCCCCCCCCCCCccccccCCcccchh
Q 044013           52 RAKNRPPSSSSISDKLTFFPSPSTWDDHQRSVHTNNNNHSNYDSYGQNYHQHLNMIGDE  110 (153)
Q Consensus        52 kp~~C~~c~~~~Cgk~~~F~~~~~L~~H~~~~Ht~~kp~~~~~~~~~~f~~~~~~~~~~  110 (153)
                      +||.|+.|++.       |.....|..|++ +|++++|| .|..|++.|.+... +..+
T Consensus         1 k~~~C~~C~~~-------f~~~~~l~~H~~-~h~~~~~~-~C~~C~~~f~~~~~-l~~H   49 (60)
T 2adr_A            1 RSFVCEVCTRA-------FARQEHLKRHYR-SHTNEKPY-PCGLCNRAFTRRDL-LIRH   49 (60)
T ss_dssp             CCBCCTTTCCC-------BSCHHHHHHHHH-TTTSSCSE-ECTTTCCEESSHHH-HHHH
T ss_pred             CcCcCCCCccc-------cCCHHHHHHHHH-HhCCCCCc-cCCCCCCccCCHHH-HHHH
Confidence            68999966665       999999999999 99999999 79999999965444 4444

>2elm_A Zinc finger protein 406; ZFAT zinc finger 1, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=98.65  E-value=1.8e-08  Score=54.48  Aligned_cols=30  Identities=27%  Similarity=0.468  Sum_probs=26.7

Q ss_pred             CCcceeccccccccCChhHHHHH-HHhhcCC
Q 044013           22 TGRSYECVFCKRGFTTAQALGGH-MNIHRKD   51 (153)
Q Consensus        22 gekp~~C~~Cgk~F~~~~~L~~H-~r~H~ge   51 (153)
                      +++||.|++|++.|.....|..| +++|+++
T Consensus         6 ~~k~~~C~~C~k~f~~~~~L~~H~~~~H~~~   36 (37)
T 2elm_A            6 SGHLYYCSQCHYSSITKNCLKRHVIQKHSNI   36 (37)
T ss_dssp             SSCEEECSSSSCEEECHHHHHHHHHHHTCCC
T ss_pred             CCcCeECCCCCcccCCHHHHHHHHHHHccCc
Confidence            48899999999999999999999 8899875

>1fv5_A First zinc finger of U-shaped; CCHC, protein interaction, transcription; NMR {Drosophila melanogaster} SCOP: g.37.1.2 PDB: 1y0j_B 2l6z_B

Probab=98.65  E-value=7.2e-09  Score=56.80  Aligned_cols=30  Identities=20%  Similarity=0.349  Sum_probs=26.9

Q ss_pred             CCCcceeccccccccCChhHHHHHHHhhcCCCCCCCC
Q 044013           21 GTGRSYECVFCKRGFTTAQALGGHMNIHRKDRAKNRP   57 (153)
Q Consensus        21 ~gekp~~C~~Cgk~F~~~~~L~~H~r~H~gekp~~C~   57 (153)
                      .+++||.|++|+|+|...++|..|+       ||.|.
T Consensus         4 ~gekp~~C~~CgK~F~~~s~L~~H~-------py~C~   33 (36)
T 1fv5_A            4 LKPARFMCLPCGIAFSSPSTLEAHQ-------AYYCS   33 (36)
T ss_dssp             SSCCCCEETTTTEECSCHHHHHHHH-------HHTST
T ss_pred             CCccCeECCCCCCccCCHhHccCcC-------CeECc
Confidence            3689999999999999999999998       77775

>1ard_A Yeast transcription factor ADR1; transcription regulation; NMR {Saccharomyces cerevisiae} SCOP: g.37.1.1 PDB: 1arf_A 1are_A

Probab=98.64  E-value=1.8e-08  Score=50.83  Aligned_cols=29  Identities=31%  Similarity=0.723  Sum_probs=26.1

Q ss_pred             cceeccccccccCChhHHHHHHHhhcCCC
Q 044013           24 RSYECVFCKRGFTTAQALGGHMNIHRKDR   52 (153)
Q Consensus        24 kp~~C~~Cgk~F~~~~~L~~H~r~H~gek   52 (153)
                      +||.|.+|++.|.....|..|+++|++++
T Consensus         1 k~~~C~~C~~~f~~~~~l~~H~~~h~~~k   29 (29)
T 1ard_A            1 RSFVCEVCTRAFARQEHLKRHYRSHTNEK   29 (29)
T ss_dssp             CCCBCTTTCCBCSSHHHHHHHHHHHSCCC
T ss_pred             CCeECCCCCcccCCHHHHHHHHHHhcCCC
Confidence            58999999999999999999999998864

>2m0f_A Zinc finger and BTB domain-containing protein 17; C2H2 zinc fingers, transcription; NMR {Homo sapiens}

Probab=98.64  E-value=1.5e-08  Score=51.02  Aligned_cols=29  Identities=31%  Similarity=0.635  Sum_probs=26.9

Q ss_pred             cceeccccccccCChhHHHHHHHhhcCCC
Q 044013           24 RSYECVFCKRGFTTAQALGGHMNIHRKDR   52 (153)
Q Consensus        24 kp~~C~~Cgk~F~~~~~L~~H~r~H~gek   52 (153)
                      +||.|.+|++.|.....|..|+++|++++
T Consensus         1 ~~~~C~~C~k~f~~~~~l~~H~~~H~~~k   29 (29)
T 2m0f_A            1 GPLKCRECGKQFTTSGNLKRHLRIHSGEK   29 (29)
T ss_dssp             CCEECTTTSCEESCHHHHHHHHHHHHTCC
T ss_pred             CCccCCCCCCccCChhHHHHHHHHhcCCC
Confidence            58999999999999999999999999875

>1x3c_A Zinc finger protein 292; DNA binding, nuclear protein, C2H2-type zinc finger, KIAA0530, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: g.37.1.1

Probab=98.64  E-value=8.3e-09  Score=64.80  Aligned_cols=37  Identities=14%  Similarity=-0.038  Sum_probs=31.7

Q ss_pred             hhcCCCCCCCCC--CCCCCCCCCccCCCCChhhhcc-ccccCCCCCCC
Q 044013           47 IHRKDRAKNRPP--SSSSISDKLTFFPSPSTWDDHQ-RSVHTNNNNHS   91 (153)
Q Consensus        47 ~H~gekp~~C~~--c~~~~Cgk~~~F~~~~~L~~H~-~~~Ht~~kp~~   91 (153)
                      .++|+|||+|.+  |+++       |.+.++|..|+ + +|++++||.
T Consensus        21 ~~sGEKPYkC~~~~CgKa-------Fsr~s~L~~H~rr-iHTgEKP~~   60 (73)
T 1x3c_A           21 RYSPYRPYRCVHQGCFAA-------FTIQQNLILHYQA-VHKSDLPAF   60 (73)
T ss_dssp             SSCSSCSCBCCSTTCCCB-------CSSHHHHHHHHHH-HSSSCCCCC
T ss_pred             cccCCCCeECCCCCcChh-------HcCHHHHHHHhhh-hCCCCCCcc
Confidence            468999999974  5555       99999999998 6 899999994

>1klr_A Zinc finger Y-chromosomal protein; transcription; NMR {Synthetic} SCOP: g.37.1.1 PDB: 5znf_A 1kls_A 1xrz_A* 7znf_A

Probab=98.62  E-value=2.2e-08  Score=50.72  Aligned_cols=30  Identities=17%  Similarity=0.538  Sum_probs=26.0

Q ss_pred             cceeccccccccCChhHHHHHHHhhcCCCC
Q 044013           24 RSYECVFCKRGFTTAQALGGHMNIHRKDRA   53 (153)
Q Consensus        24 kp~~C~~Cgk~F~~~~~L~~H~r~H~gekp   53 (153)
                      +||.|.+|++.|.....|..|+++|++++|
T Consensus         1 k~~~C~~C~k~f~~~~~l~~H~~~h~~~~~   30 (30)
T 1klr_A            1 KTYQCQYCEFRSADSSNLKTHIKTKHSKEK   30 (30)
T ss_dssp             CCCCCSSSSCCCSCSHHHHHHHHHHTSSCC
T ss_pred             CCccCCCCCCccCCHHHHHHHHHHHccCCC
Confidence            478999999999999999999999988764

>3iuf_A Zinc finger protein UBI-D4; structural genomics consortium (SGC), C2H2, APO metal-binding, nucleus, phosphoprotein, transcription, TRAN regulation; 1.80A {Homo sapiens}

Probab=98.61  E-value=1.9e-08  Score=57.82  Aligned_cols=32  Identities=19%  Similarity=0.506  Sum_probs=27.2

Q ss_pred             CCcceeccccccccCChhHHHHHHH-hhcCCCC
Q 044013           22 TGRSYECVFCKRGFTTAQALGGHMN-IHRKDRA   53 (153)
Q Consensus        22 gekp~~C~~Cgk~F~~~~~L~~H~r-~H~gekp   53 (153)
                      +++||.|.+|++.|.....|..|++ +|+++.+
T Consensus         4 ~~kp~~C~~C~k~F~~~~~L~~H~~~~H~~e~~   36 (48)
T 3iuf_A            4 RDKPYACDICGKRYKNRPGLSYHYAHSHLAEEE   36 (48)
T ss_dssp             TTSCEECTTTCCEESSHHHHHHHHHHSSCC---
T ss_pred             CCcCEECCCcCcccCCHHHHHHHhhhhcCCCCC
Confidence            5899999999999999999999999 9998765

>1zfd_A SWI5; DNA binding motif, zinc finger DNA binding domain; NMR {Saccharomyces cerevisiae} SCOP: g.37.1.1

Probab=98.61  E-value=2.5e-08  Score=51.79  Aligned_cols=30  Identities=27%  Similarity=0.555  Sum_probs=25.7

Q ss_pred             Ccceecc--ccccccCChhHHHHHHHhhcCCC
Q 044013           23 GRSYECV--FCKRGFTTAQALGGHMNIHRKDR   52 (153)
Q Consensus        23 ekp~~C~--~Cgk~F~~~~~L~~H~r~H~gek   52 (153)
                      ++||.|.  .|++.|.....|..|+++|++++
T Consensus         1 ek~~~C~~~~C~k~f~~~~~L~~H~~~H~~~~   32 (32)
T 1zfd_A            1 DRPYSCDHPGCDKAFVRNHDLIRHKKSHQEKA   32 (32)
T ss_dssp             CCSBCCCCTTCCCCBSSSHHHHHHHGGGTCCC
T ss_pred             CCCCcCcCCCCCCccCCHHHHHHHHHHccCCC
Confidence            4789998  79999999999999999998764

>2m0e_A Zinc finger and BTB domain-containing protein 17; C2H2 zinc fingers, transcription; NMR {Homo sapiens}

Probab=98.61  E-value=1.8e-08  Score=50.68  Aligned_cols=29  Identities=28%  Similarity=0.636  Sum_probs=24.5

Q ss_pred             cceeccccccccCChhHHHHHHHhhcCCC
Q 044013           24 RSYECVFCKRGFTTAQALGGHMNIHRKDR   52 (153)
Q Consensus        24 kp~~C~~Cgk~F~~~~~L~~H~r~H~gek   52 (153)
                      +||.|.+|++.|.....|..|+++|++++
T Consensus         1 k~~~C~~C~~~f~~~~~l~~H~~~h~~~~   29 (29)
T 2m0e_A            1 KEHKCPHCDKKFNQVGNLKAHLKIHIADG   29 (29)
T ss_dssp             CCCCCSSCCCCCCTTTHHHHHHHHHHSCC
T ss_pred             CCCcCCCCCcccCCHHHHHHHHHHhccCC
Confidence            57888888888888888888888888764

>1srk_A Zinc finger protein ZFPM1; classical zinc finger, transcription; NMR {Mus musculus} SCOP: g.37.1.1

Probab=98.61  E-value=4.8e-09  Score=55.76  Aligned_cols=35  Identities=20%  Similarity=0.166  Sum_probs=31.0

Q ss_pred             hhcCCCCCCCCCCCCCCCCCCccCCCCChhhhccccccCCCCC
Q 044013           47 IHRKDRAKNRPPSSSSISDKLTFFPSPSTWDDHQRSVHTNNNN   89 (153)
Q Consensus        47 ~H~gekp~~C~~c~~~~Cgk~~~F~~~~~L~~H~~~~Ht~~kp   89 (153)
                      +|++++||.|..|++.       |.....|..|++ +|++++|
T Consensus         1 ~H~~~k~~~C~~C~k~-------f~~~~~l~~H~~-~H~~~~~   35 (35)
T 1srk_A            1 GSSGKRPFVCRICLSA-------FTTKANCARHLK-VHTDTLS   35 (35)
T ss_dssp             CCSCCSCEECSSSCCE-------ESSHHHHHHHHG-GGTSCCC
T ss_pred             CCCCCcCeeCCCCCcc-------cCCHHHHHHHHH-HcCCCCC
Confidence            4889999999966666       999999999999 9999876

>2elx_A Zinc finger protein 406; ZFAT zinc finger 1, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Mus musculus}

Probab=98.61  E-value=3.9e-09  Score=55.95  Aligned_cols=35  Identities=11%  Similarity=-0.046  Sum_probs=30.9

Q ss_pred             hhcCCCCCCCCCCCCCCCCCCccCCCCChhhhccccccCCCCC
Q 044013           47 IHRKDRAKNRPPSSSSISDKLTFFPSPSTWDDHQRSVHTNNNN   89 (153)
Q Consensus        47 ~H~gekp~~C~~c~~~~Cgk~~~F~~~~~L~~H~~~~Ht~~kp   89 (153)
                      +|++++||.|..|++.       |.+...|..|++ +|++++|
T Consensus         1 ~h~~~k~~~C~~C~k~-------f~~~~~L~~H~~-~h~~~kp   35 (35)
T 2elx_A            1 GSSGSSGYVCALCLKK-------FVSSIRLRSHIR-EVHGAAQ   35 (35)
T ss_dssp             CCCCCCSEECSSSCCE-------ESSHHHHHHHHH-HTSCTTC
T ss_pred             CCCCCCCeECCCCcch-------hCCHHHHHHHHH-HHcCCCC
Confidence            4789999999966666       999999999999 9999876

>1f2i_G Fusion of N-terminal 17-MER peptide extension to ZIF12; zinc finger, dimer, protein-DNA complex, cooperativity, transcription/DNA complex; 2.35A {Mus musculus} SCOP: g.37.1.1 g.37.1.1

Probab=98.58  E-value=1.8e-09  Score=67.02  Aligned_cols=50  Identities=18%  Similarity=0.269  Sum_probs=43.3

Q ss_pred             hhcCCCCCCCC--CCCCCCCCCCccCCCCChhhhccccccCCCCCCCCCCCCccccccCCc
Q 044013           47 IHRKDRAKNRP--PSSSSISDKLTFFPSPSTWDDHQRSVHTNNNNHSNYDSYGQNYHQHLN  105 (153)
Q Consensus        47 ~H~gekp~~C~--~c~~~~Cgk~~~F~~~~~L~~H~~~~Ht~~kp~~~~~~~~~~f~~~~~  105 (153)
                      +|++++||.|+  .|++.       |.....|..|++ +|++++|| .|..|++.|.+...
T Consensus        13 ~~~~~~~~~C~~~~C~k~-------f~~~~~l~~H~~-~h~~~~~~-~C~~C~~~f~~~~~   64 (73)
T 1f2i_G           13 VVPKMRPYACPVESCDRR-------FSRSDELTRHIR-IHTGQKPF-QCRICMRNFSRSDH   64 (73)
T ss_dssp             CCCCCCCEECSSTTBCCE-------ESSHHHHHHHHH-HHHCCCCE-ECTTTCCEESCHHH
T ss_pred             cCCCCCccCCcCCCCCCc-------cCCHHHHHHHHH-hhCCCCCe-ECCCCCchhCCHHH
Confidence            68899999997  36655       999999999999 99999999 79999999965443

>2kvf_A Zinc finger and BTB domain-containing protein 32; protein/DNA, metal-binding, transcription; NMR {Mus musculus}

Probab=98.58  E-value=2.5e-08  Score=50.12  Aligned_cols=28  Identities=25%  Similarity=0.654  Sum_probs=25.2

Q ss_pred             CcceeccccccccCChhHHHHHHHhhcC
Q 044013           23 GRSYECVFCKRGFTTAQALGGHMNIHRK   50 (153)
Q Consensus        23 ekp~~C~~Cgk~F~~~~~L~~H~r~H~g   50 (153)
                      ++||.|.+|++.|.....|..|+++|++
T Consensus         1 ~k~~~C~~C~k~f~~~~~l~~H~~~h~~   28 (28)
T 2kvf_A            1 MRPYSCSVCGKRFSLKHQMETHYRVHTG   28 (28)
T ss_dssp             CCSEECSSSCCEESCHHHHHHHHTTSCC
T ss_pred             CcCccCCCCCcccCCHHHHHHHHHhcCC
Confidence            4789999999999999999999998874

>1sp2_A SP1F2; zinc finger, transcription activation; NMR {Homo sapiens} SCOP: g.37.1.1 PDB: 1va2_A

Probab=98.58  E-value=2.9e-08  Score=51.23  Aligned_cols=29  Identities=28%  Similarity=0.743  Sum_probs=25.2

Q ss_pred             cceecc--ccccccCChhHHHHHHHhhcCCC
Q 044013           24 RSYECV--FCKRGFTTAQALGGHMNIHRKDR   52 (153)
Q Consensus        24 kp~~C~--~Cgk~F~~~~~L~~H~r~H~gek   52 (153)
                      +||.|.  .|++.|.....|..|+++|++++
T Consensus         1 kp~~C~~~~C~k~f~~~~~L~~H~~~H~~~k   31 (31)
T 1sp2_A            1 RPFMCTWSYCGKRFTRSDELQRHKRTHTGEK   31 (31)
T ss_dssp             CCCBCCSTTCCCBCSSHHHHHHHHTTTSCCC
T ss_pred             CCcCCcCCCCCcccCCHhHHHHHHHHhcCCC
Confidence            588997  89999999999999999998864

>2lvr_A Zinc finger and BTB domain-containing protein 17; C2H2 zinc finger, classical zinc finger, transcription; NMR {Homo sapiens}

Probab=97.99  E-value=6.9e-09  Score=52.88  Aligned_cols=30  Identities=33%  Similarity=0.778  Sum_probs=23.5

Q ss_pred             CcceeccccccccCChhHHHHHHHhhcCCC
Q 044013           23 GRSYECVFCKRGFTTAQALGGHMNIHRKDR   52 (153)
Q Consensus        23 ekp~~C~~Cgk~F~~~~~L~~H~r~H~gek   52 (153)
                      ++||.|.+|++.|.....|..|+++|++++
T Consensus         1 ~k~~~C~~C~k~f~~~~~l~~H~~~h~~~k   30 (30)
T 2lvr_A            1 MKPYVCIHCQRQFADPGALQRHVRIHTGEK   30 (30)
Confidence            367888888888888888888888887653

>2kvh_A Zinc finger and BTB domain-containing protein 32; protein/DNA, metal-binding, transcription; NMR {Mus musculus}

Probab=98.57  E-value=3.2e-08  Score=49.38  Aligned_cols=27  Identities=19%  Similarity=0.530  Sum_probs=24.7

Q ss_pred             CcceeccccccccCChhHHHHHHHhhc
Q 044013           23 GRSYECVFCKRGFTTAQALGGHMNIHR   49 (153)
Q Consensus        23 ekp~~C~~Cgk~F~~~~~L~~H~r~H~   49 (153)
                      ++||.|.+|++.|.....|..|+++|+
T Consensus         1 ek~~~C~~C~k~f~~~~~l~~H~~~H~   27 (27)
T 2kvh_A            1 EKPFSCSLCPQRSRDFSAMTKHLRTHG   27 (27)
T ss_dssp             CCCEECSSSSCEESSHHHHHHHHHHCC
T ss_pred             CcCccCCCcChhhCCHHHHHHHHHHcc
Confidence            479999999999999999999999885

>1ncs_A Peptide M30F, transcriptional factor SWI5; DNA binding motif, transcription regulation, zinc-finger; NMR {Saccharomyces cerevisiae} SCOP: g.37.1.1

Probab=98.57  E-value=3.1e-08  Score=56.57  Aligned_cols=38  Identities=21%  Similarity=0.532  Sum_probs=27.6

Q ss_pred             CcccccCCCCcceecc--ccccccCChhHHHHHHHhhcCCC
Q 044013           14 SDDETDAGTGRSYECV--FCKRGFTTAQALGGHMNIHRKDR   52 (153)
Q Consensus        14 ~h~~~~~~gekp~~C~--~Cgk~F~~~~~L~~H~r~H~gek   52 (153)
                      .|...+++ ++||.|.  .|++.|.....|..|+++|++++
T Consensus         8 ~~~~~H~~-~k~~~C~~~~C~k~F~~~~~L~~H~~~H~~ek   47 (47)
T 1ncs_A            8 DKYVKEMP-DKTFECLFPGCTKTFKRRYNIRSHIQTHLEDR   47 (47)
T ss_dssp             GGSCEEET-TTEEECCCTTCCCEECSSSSHHHHHHHHTTTC
T ss_pred             HHHhccCC-CCCeECCCCCCCCccCCHHHHHHHHHHccCCC
Confidence            34444443 7888885  58888888888888888888764

>2lvt_A Zinc finger and BTB domain-containing protein 17; C2H2 zinc finger, transcription; NMR {Homo sapiens}

Probab=97.98  E-value=7.3e-09  Score=52.59  Aligned_cols=29  Identities=31%  Similarity=0.732  Sum_probs=22.8

Q ss_pred             cceeccccccccCChhHHHHHHHhhcCCC
Q 044013           24 RSYECVFCKRGFTTAQALGGHMNIHRKDR   52 (153)
Q Consensus        24 kp~~C~~Cgk~F~~~~~L~~H~r~H~gek   52 (153)
                      +||.|.+|++.|.....|..|+++|++++
T Consensus         1 k~~~C~~C~k~f~~~~~l~~H~~~H~~~k   29 (29)
T 2lvt_A            1 KPCQCVMCGKAFTQASSLIAHVRQHTGEK   29 (29)
Confidence            47888888888888888888888887654

>2kvg_A Zinc finger and BTB domain-containing protein 32; protein/DNA, metal-binding, transcription; NMR {Mus musculus}

Probab=98.56  E-value=2.6e-08  Score=49.95  Aligned_cols=27  Identities=26%  Similarity=0.680  Sum_probs=24.7

Q ss_pred             CcceeccccccccCChhHHHHHHHhhc
Q 044013           23 GRSYECVFCKRGFTTAQALGGHMNIHR   49 (153)
Q Consensus        23 ekp~~C~~Cgk~F~~~~~L~~H~r~H~   49 (153)
                      ++||.|.+|++.|.....|..|+++|+
T Consensus         1 ~k~~~C~~C~k~f~~~~~l~~H~~~H~   27 (27)
T 2kvg_A            1 AAPYRCPLCRAGCPSLASMQAHMRGHS   27 (27)
T ss_dssp             CCTEEETTTTEEESCHHHHHHHHTTCC
T ss_pred             CcCcCCCCCCcccCCHHHHHHHHHhcC
Confidence            479999999999999999999999885

>1bbo_A Human enhancer-binding protein MBP-1; DNA-binding protein; HET: ABA; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1 PDB: 3znf_A 4znf_A

Probab=98.52  E-value=2e-08  Score=59.05  Aligned_cols=48  Identities=15%  Similarity=0.135  Sum_probs=39.6

Q ss_pred             CCCCCCCCCCCCCCCccCCCCChhhhccccccCCCCCCCCCCCCccccccCCcccchh
Q 044013           53 AKNRPPSSSSISDKLTFFPSPSTWDDHQRSVHTNNNNHSNYDSYGQNYHQHLNMIGDE  110 (153)
Q Consensus        53 p~~C~~c~~~~Cgk~~~F~~~~~L~~H~~~~Ht~~kp~~~~~~~~~~f~~~~~~~~~~  110 (153)
                      ||.|+.|++.       |.....|..|++ +|++++|| .|..|+++|.+... +..+
T Consensus         1 p~~C~~C~~~-------f~~~~~l~~H~~-~h~~~~~~-~C~~C~~~f~~~~~-l~~H   48 (57)
T 1bbo_A            1 KYICEECGIR-------XKKPSMLKKHIR-THTDVRPY-HCTYCNFSFKTKGN-LTKH   48 (57)
T ss_dssp             CCBCTTTCCB-------CSSHHHHHHHHH-HTSSCCCE-ECSSSSCEESSHHH-HHHH
T ss_pred             CCcCCCCcCc-------CCCHHHHHHHHH-hcCCCCCc-cCCCCCchhcCHHH-HHHH
Confidence            7899966655       999999999999 99999999 79999999965444 4443

>2epp_A POZ-, at HOOK-, and zinc finger-containing protein 1; C2H2, zinc finger domain, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: g.37.1.1

Probab=98.51  E-value=8.4e-08  Score=59.50  Aligned_cols=33  Identities=24%  Similarity=0.343  Sum_probs=28.8

Q ss_pred             CCCcceeccccccccCChhHHHHHHHhhcCCCC
Q 044013           21 GTGRSYECVFCKRGFTTAQALGGHMNIHRKDRA   53 (153)
Q Consensus        21 ~gekp~~C~~Cgk~F~~~~~L~~H~r~H~gekp   53 (153)
                      .+++||+|.+|+|.|.....|..|+++|+++..
T Consensus         9 ~~ekpy~C~~CgK~F~~~s~L~~H~r~Htg~~~   41 (66)
T 2epp_A            9 REAGILPCGLCGKVFTDANRLRQHEAQHGVTSL   41 (66)
T ss_dssp             CCCCCCCCTTTCCCCSCHHHHHHHHHHHTTTSC
T ss_pred             CCccCcCCCCCCCccCCHHHHHhhhhhhCCCcc
Confidence            348899999999999999999999999998653

>1paa_A Yeast transcription factor ADR1; transcription regulation; NMR {Saccharomyces cerevisiae} SCOP: g.37.1.1

Probab=98.49  E-value=5e-08  Score=49.58  Aligned_cols=29  Identities=34%  Similarity=0.698  Sum_probs=22.8

Q ss_pred             cceeccccccccCChhHHHHH-HHhhcCCC
Q 044013           24 RSYECVFCKRGFTTAQALGGH-MNIHRKDR   52 (153)
Q Consensus        24 kp~~C~~Cgk~F~~~~~L~~H-~r~H~gek   52 (153)
                      +||.|..|++.|.....|..| +++|++++
T Consensus         1 k~~~C~~C~k~f~~~~~l~~H~~~~H~~~~   30 (30)
T 1paa_A            1 KAYACGLCNRAFTRRDLLIRHAQKIHSGNL   30 (30)
T ss_dssp             CCSBCTTTCCBCSSSHHHHHHHTTTSCCCC
T ss_pred             CCcCCcccCcccCChHHHHHHHHHHccCCC
Confidence            478888888888888888888 67887764

>1znf_A 31ST zinc finger from XFIN; zinc finger DNA binding domain; NMR {Xenopus laevis} SCOP: g.37.1.1

Probab=98.48  E-value=6.7e-08  Score=47.94  Aligned_cols=27  Identities=33%  Similarity=0.845  Sum_probs=22.3

Q ss_pred             ceeccccccccCChhHHHHHHHhhcCC
Q 044013           25 SYECVFCKRGFTTAQALGGHMNIHRKD   51 (153)
Q Consensus        25 p~~C~~Cgk~F~~~~~L~~H~r~H~ge   51 (153)
                      ||.|.+|++.|.....|..|+++|+++
T Consensus         1 ~~~C~~C~k~f~~~~~l~~H~~~h~~~   27 (27)
T 1znf_A            1 XYKCGLCERSFVEKSALSRHQRVHKNX   27 (27)
T ss_dssp             -CBCSSSCCBCSSHHHHHHHGGGTCC-
T ss_pred             CccCCCCCCcCCCHHHHHHHHHHcCCC
Confidence            688999999999999999999888764

>1rim_A E6APC2 peptide; E6-binding domain, zinc finger, human papillomavirus, HPV E6 protein, de novo protein; NMR {Synthetic} SCOP: k.12.1.1

Probab=98.46  E-value=3.7e-08  Score=51.92  Aligned_cols=31  Identities=13%  Similarity=0.132  Sum_probs=27.8

Q ss_pred             CCCCCCCCCCCCCCCCccCCCCChhhhccccccCCCCCC
Q 044013           52 RAKNRPPSSSSISDKLTFFPSPSTWDDHQRSVHTNNNNH   90 (153)
Q Consensus        52 kp~~C~~c~~~~Cgk~~~F~~~~~L~~H~~~~Ht~~kp~   90 (153)
                      +||.|+.|++.       |...+.|..|++ +|++++||
T Consensus         1 kp~~C~~C~k~-------F~~~~~L~~H~~-~H~~~~~~   31 (33)
T 1rim_A            1 YKFACPECPKR-------FMRSDHLSKHIT-LHELLGEE   31 (33)
T ss_dssp             CCCCCSSSCCC-------CSSHHHHHHHHH-HHTTTCCC
T ss_pred             CcccCCCCCch-------hCCHHHHHHHHH-HhCCCCCC
Confidence            68999965555       999999999999 99999998

>1bhi_A CRE-BP1, ATF-2; CRE binding protein, transcriptional activation domain, Zn finger, DNA-binding regulatory protein; NMR {Homo sapiens} SCOP: g.37.1.1

Probab=98.45  E-value=1.4e-08  Score=54.98  Aligned_cols=35  Identities=11%  Similarity=0.091  Sum_probs=31.7

Q ss_pred             hcCCCCCCCC--CCCCCCCCCCccCCCCChhhhccccccCCCCCC
Q 044013           48 HRKDRAKNRP--PSSSSISDKLTFFPSPSTWDDHQRSVHTNNNNH   90 (153)
Q Consensus        48 H~gekp~~C~--~c~~~~Cgk~~~F~~~~~L~~H~~~~Ht~~kp~   90 (153)
                      |++++||.|.  .|++.       |...+.|..|++ +|++++||
T Consensus         1 H~~~k~~~C~~~~C~k~-------f~~~~~L~~H~~-~H~~~k~~   37 (38)
T 1bhi_A            1 MSDDKPFLCTAPGCGQR-------FTNEDHLAVHKH-KHEMTLKF   37 (38)
T ss_dssp             CTTCCCEECCCTTTCCE-------ESSHHHHHHHHH-HHHTTTTT
T ss_pred             CCCCcceECCCCCCCcc-------cCCHHHHHHHHH-HhCCCCCC
Confidence            6789999999  37777       999999999999 99999998

>2elv_A Zinc finger protein 406; ZFAT zinc finger 1, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=98.43  E-value=2.3e-08  Score=53.39  Aligned_cols=35  Identities=14%  Similarity=0.066  Sum_probs=30.2

Q ss_pred             HhhcCCCCCCCCCCCCCCCCCCccCCCCChhhhccccccCCCC
Q 044013           46 NIHRKDRAKNRPPSSSSISDKLTFFPSPSTWDDHQRSVHTNNN   88 (153)
Q Consensus        46 r~H~gekp~~C~~c~~~~Cgk~~~F~~~~~L~~H~~~~Ht~~k   88 (153)
                      +.|++++||.|..|++.       |.....|..|++ +|++++
T Consensus         2 ~~h~~~k~~~C~~C~k~-------f~~~~~l~~H~~-~H~~~k   36 (36)
T 2elv_A            2 SSGSSGLLYDCHICERK-------FKNELDRDRHML-VHGDKW   36 (36)
T ss_dssp             CCSCCCCCEECSSSCCE-------ESSHHHHHHHHT-TTSTTC
T ss_pred             CCCCCCCCeECCCCCCc-------cCCHHHHHHHHH-HhcCCC
Confidence            36889999999966666       999999999999 999864

>2elp_A Zinc finger protein 406; ZFAT zinc finger 1, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=98.43  E-value=1.5e-08  Score=54.49  Aligned_cols=35  Identities=20%  Similarity=0.152  Sum_probs=30.4

Q ss_pred             HhhcCCCCCCCCCCCCCCCCCCccCCCC-ChhhhccccccCCCC
Q 044013           46 NIHRKDRAKNRPPSSSSISDKLTFFPSP-STWDDHQRSVHTNNN   88 (153)
Q Consensus        46 r~H~gekp~~C~~c~~~~Cgk~~~F~~~-~~L~~H~~~~Ht~~k   88 (153)
                      ++|++++||.|+.|++.       |... ..|..|++ +|++++
T Consensus         2 ~~h~~~k~~~C~~C~k~-------f~~~~~~L~~H~~-~H~~~k   37 (37)
T 2elp_A            2 SSGSSGRAMKCPYCDFY-------FMKNGSDLQRHIW-AHEGVK   37 (37)
T ss_dssp             CSCCCCCCEECSSSSCE-------ECSSCHHHHHHHH-HHHTCC
T ss_pred             CCCCCCCCeECCCCChh-------hccCHHHHHHHHH-hcCCCC
Confidence            47899999999966666       9999 99999999 998864

>2kfq_A FP1; protein, de novo protein; NMR {Synthetic}

Probab=98.42  E-value=2.6e-08  Score=52.08  Aligned_cols=31  Identities=13%  Similarity=0.042  Sum_probs=27.6

Q ss_pred             CCCCCCCCCCCCCCCCccCCCCChhhhccccccCCCCCC
Q 044013           52 RAKNRPPSSSSISDKLTFFPSPSTWDDHQRSVHTNNNNH   90 (153)
Q Consensus        52 kp~~C~~c~~~~Cgk~~~F~~~~~L~~H~~~~Ht~~kp~   90 (153)
                      +||.|..|++.       |...+.|..|++ +|++++||
T Consensus         1 kp~~C~~C~k~-------f~~~~~L~~H~~-~H~~~kp~   31 (32)
T 2kfq_A            1 YAFACPACPKR-------FMRSDALSKHIK-TAFIVVAL   31 (32)
T ss_dssp             CCSSSSSSCTT-------HHHHHTTSSSTT-SSSSSSSC
T ss_pred             CCCCCCCCCcc-------cCCHHHHHHHHH-HHccCCCC
Confidence            58999966555       999999999999 99999997

>2elq_A Zinc finger protein 406; ZFAT zinc finger 1, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=98.39  E-value=2.7e-08  Score=53.10  Aligned_cols=35  Identities=11%  Similarity=0.072  Sum_probs=30.2

Q ss_pred             HhhcCCCCCCCCCCCCCCCCCCccCCCCChhhhccccccCCCC
Q 044013           46 NIHRKDRAKNRPPSSSSISDKLTFFPSPSTWDDHQRSVHTNNN   88 (153)
Q Consensus        46 r~H~gekp~~C~~c~~~~Cgk~~~F~~~~~L~~H~~~~Ht~~k   88 (153)
                      ++|++++||.|..|++.       |.....|..|++ +|++++
T Consensus         2 ~~h~~~k~~~C~~C~k~-------f~~~~~l~~H~~-~H~~~k   36 (36)
T 2elq_A            2 SSGSSGKPFKCSLCEYA-------TRSKSNLKAHMN-RHSTEK   36 (36)
T ss_dssp             CSSCCCCSEECSSSSCE-------ESCHHHHHHHHH-HSSTTC
T ss_pred             CCCCCCCCccCCCCCch-------hCCHHHHHHHHH-HhccCC
Confidence            36899999999966666       999999999999 998864

>2elm_A Zinc finger protein 406; ZFAT zinc finger 1, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=98.39  E-value=1.2e-08  Score=55.16  Aligned_cols=35  Identities=11%  Similarity=-0.034  Sum_probs=30.0

Q ss_pred             HHhhcCCCCCCCCCCCCCCCCCCccCCCCChhhhc-cccccCCC
Q 044013           45 MNIHRKDRAKNRPPSSSSISDKLTFFPSPSTWDDH-QRSVHTNN   87 (153)
Q Consensus        45 ~r~H~gekp~~C~~c~~~~Cgk~~~F~~~~~L~~H-~~~~Ht~~   87 (153)
                      +++|++++||.|..|++.       |.....|..| ++ +|+++
T Consensus         1 ~~~H~~~k~~~C~~C~k~-------f~~~~~L~~H~~~-~H~~~   36 (37)
T 2elm_A            1 GSSGSSGHLYYCSQCHYS-------SITKNCLKRHVIQ-KHSNI   36 (37)
T ss_dssp             CCSSSSSCEEECSSSSCE-------EECHHHHHHHHHH-HTCCC
T ss_pred             CCccCCCcCeECCCCCcc-------cCCHHHHHHHHHH-HccCc
Confidence            357999999999966666       9999999999 88 89875

>2eln_A Zinc finger protein 406; ZFAT zinc finger 1, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=98.39  E-value=3.1e-08  Score=54.78  Aligned_cols=33  Identities=21%  Similarity=0.178  Sum_probs=28.8

Q ss_pred             hhcCCCCCCCCC--CCCCCCCCCccCCCCChhhhccccccCCC
Q 044013           47 IHRKDRAKNRPP--SSSSISDKLTFFPSPSTWDDHQRSVHTNN   87 (153)
Q Consensus        47 ~H~gekp~~C~~--c~~~~Cgk~~~F~~~~~L~~H~~~~Ht~~   87 (153)
                      .+++++||+|+.  |+++       |...+.|..|++ +|+++
T Consensus         3 ~~~gekp~~C~~~~C~k~-------F~~~~~L~~H~r-~Htg~   37 (38)
T 2eln_A            3 SGSSGILLKCPTDGCDYS-------TPDKYKLQAHLK-VHTAL   37 (38)
T ss_dssp             CSSCCCCEECSSSSCCCE-------ESCHHHHHHHHH-HHSCC
T ss_pred             CCCCCCCCCCCCCCCCCc-------cCCHHHHHHHHH-hcCCC
Confidence            468899999984  6666       999999999999 99986

>2elr_A Zinc finger protein 406; ZFAT zinc finger 1, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=98.37  E-value=6.4e-08  Score=51.43  Aligned_cols=34  Identities=18%  Similarity=0.219  Sum_probs=29.8

Q ss_pred             hhcCCCCCCCCCCCCCCCCCCccCCCCChhhhccccccCCCC
Q 044013           47 IHRKDRAKNRPPSSSSISDKLTFFPSPSTWDDHQRSVHTNNN   88 (153)
Q Consensus        47 ~H~gekp~~C~~c~~~~Cgk~~~F~~~~~L~~H~~~~Ht~~k   88 (153)
                      +|++++||.|..|++.       |.....|..|++ +|++++
T Consensus         3 ~h~~~~~~~C~~C~k~-------f~~~~~l~~H~~-~H~~ek   36 (36)
T 2elr_A            3 SGSSGKTHLCDMCGKK-------FKSKGTLKSHKL-LHTADG   36 (36)
T ss_dssp             CCCCCSSCBCTTTCCB-------CSSHHHHHHHHH-HHSSCC
T ss_pred             CCCCCCCeecCcCCCC-------cCchHHHHHHHH-HhcCCC
Confidence            5789999999966666       999999999999 999874

>2lvu_A Zinc finger and BTB domain-containing protein 17; C2H2 zinc finger, transcription; NMR {Homo sapiens}

Probab=97.73  E-value=4.4e-08  Score=48.40  Aligned_cols=26  Identities=27%  Similarity=0.677  Sum_probs=20.0

Q ss_pred             cceeccccccccCChhHHHHHHHhhc
Q 044013           24 RSYECVFCKRGFTTAQALGGHMNIHR   49 (153)
Q Consensus        24 kp~~C~~Cgk~F~~~~~L~~H~r~H~   49 (153)
                      +||.|.+|++.|.....|..|+++|+
T Consensus         1 kp~~C~~C~k~f~~~~~l~~H~~~H~   26 (26)
T 2lvu_A            1 KPYVCERCGKRFVQSSQLANHIRHHD   26 (26)
Confidence            47788888888888888888877764

>2elt_A Zinc finger protein 406; ZFAT zinc finger 1, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=98.36  E-value=3.3e-08  Score=52.60  Aligned_cols=34  Identities=18%  Similarity=0.183  Sum_probs=29.8

Q ss_pred             hhcCCCCCCCCCCCCCCCCCCccCCCCChhhhccccccCCCC
Q 044013           47 IHRKDRAKNRPPSSSSISDKLTFFPSPSTWDDHQRSVHTNNN   88 (153)
Q Consensus        47 ~H~gekp~~C~~c~~~~Cgk~~~F~~~~~L~~H~~~~Ht~~k   88 (153)
                      +|++++||.|..|++.       |.....|..|++ +|++++
T Consensus         3 ~h~~~k~~~C~~C~k~-------f~~~~~l~~H~~-~H~~~k   36 (36)
T 2elt_A            3 SGSSGKPYKCPQCSYA-------SAIKANLNVHLR-KHTGEK   36 (36)
T ss_dssp             CSCCCCSEECSSSSCE-------ESSHHHHHHHHH-HHTCCC
T ss_pred             CCCCCCCCCCCCCCcc-------cCCHHHHHHHHH-HccCCC
Confidence            6899999999966655       999999999999 998874

>1ncs_A Peptide M30F, transcriptional factor SWI5; DNA binding motif, transcription regulation, zinc-finger; NMR {Saccharomyces cerevisiae} SCOP: g.37.1.1

Probab=98.35  E-value=2e-08  Score=57.34  Aligned_cols=40  Identities=10%  Similarity=0.056  Sum_probs=33.1

Q ss_pred             HHHHHHhhcCCCCCCCC--CCCCCCCCCCccCCCCChhhhccccccCCCC
Q 044013           41 LGGHMNIHRKDRAKNRP--PSSSSISDKLTFFPSPSTWDDHQRSVHTNNN   88 (153)
Q Consensus        41 L~~H~r~H~gekp~~C~--~c~~~~Cgk~~~F~~~~~L~~H~~~~Ht~~k   88 (153)
                      +..|..+|++++||.|.  .|++.       |...++|..|++ +|++++
T Consensus         6 ~~~~~~~H~~~k~~~C~~~~C~k~-------F~~~~~L~~H~~-~H~~ek   47 (47)
T 1ncs_A            6 SIDKYVKEMPDKTFECLFPGCTKT-------FKRRYNIRSHIQ-THLEDR   47 (47)
T ss_dssp             SGGGSCEEETTTEEECCCTTCCCE-------ECSSSSHHHHHH-HHTTTC
T ss_pred             HHHHHhccCCCCCeECCCCCCCCc-------cCCHHHHHHHHH-HccCCC
Confidence            34456679999999995  46666       999999999999 999875

>2eod_A TNF receptor-associated factor 4; zinc binding, NF-KB, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=98.31  E-value=4.5e-08  Score=59.67  Aligned_cols=51  Identities=12%  Similarity=0.037  Sum_probs=41.8

Q ss_pred             hcCCCCCCCCCCCCCCCCCCccCCCCChhhhccccccCCCCCCCCCC-CCccccccCCcccchh
Q 044013           48 HRKDRAKNRPPSSSSISDKLTFFPSPSTWDDHQRSVHTNNNNHSNYD-SYGQNYHQHLNMIGDE  110 (153)
Q Consensus        48 H~gekp~~C~~c~~~~Cgk~~~F~~~~~L~~H~~~~Ht~~kp~~~~~-~~~~~f~~~~~~~~~~  110 (153)
                      ..+++||.|..|++.       |. ...|..|++ + ++++|| .|. .|+++|.+... +..+
T Consensus         5 ~C~~~~~~C~~C~k~-------f~-~~~L~~H~~-~-~~~~p~-~C~~~C~k~f~~~~~-L~~H   56 (66)
T 2eod_A            5 SSGKRTQPCTYCTKE-------FV-FDTIQSHQY-Q-CPRLPV-ACPNQCGVGTVARED-LPGH   56 (66)
T ss_dssp             CCCCCEEECSSSCCE-------EE-HHHHHHHHH-H-CSSSEE-ECTTCCSCCEEETTT-HHHH
T ss_pred             cCCCCCeeccccCCc-------cC-HHHHHHHHH-H-cCCcCc-cCCcccCcccccHHH-HHHH
Confidence            356889999966666       99 999999999 8 999999 789 99999966555 4444

>2ab3_A ZNF29; zinc finger protein, beta BETA alpha, RREIIB-TR, RNA binding protein; NMR {Escherichia coli} SCOP: k.12.1.1 PDB: 2ab7_A

Probab=98.28  E-value=4.4e-07  Score=45.45  Aligned_cols=27  Identities=33%  Similarity=0.625  Sum_probs=25.0

Q ss_pred             cceecc--ccccccCChhHHHHHHHhhcC
Q 044013           24 RSYECV--FCKRGFTTAQALGGHMNIHRK   50 (153)
Q Consensus        24 kp~~C~--~Cgk~F~~~~~L~~H~r~H~g   50 (153)
                      +||.|.  .|++.|.....|..|+++|++
T Consensus         1 k~~~C~~~~C~k~f~~~~~l~~H~~~H~~   29 (29)
T 2ab3_A            1 MVYVCHFENCGRSFNDRRKLNRHKKIHTG   29 (29)
T ss_dssp             CCEEECSTTTCEEESSHHHHHHHHGGGTC
T ss_pred             CCCCCcCCcCcCccCCHHHHHHHHHHhCC
Confidence            589999  999999999999999999974

>3iuf_A Zinc finger protein UBI-D4; structural genomics consortium (SGC), C2H2, APO metal-binding, nucleus, phosphoprotein, transcription, TRAN regulation; 1.80A {Homo sapiens}

Probab=98.28  E-value=8.4e-08  Score=55.05  Aligned_cols=36  Identities=8%  Similarity=0.085  Sum_probs=28.1

Q ss_pred             hhcCCCCCCCCCCCCCCCCCCccCCCCChhhhccccccCCCCC
Q 044013           47 IHRKDRAKNRPPSSSSISDKLTFFPSPSTWDDHQRSVHTNNNN   89 (153)
Q Consensus        47 ~H~gekp~~C~~c~~~~Cgk~~~F~~~~~L~~H~~~~Ht~~kp   89 (153)
                      +|++++||.|..|++.       |....+|..|++.+|+++.+
T Consensus         1 ~Ht~~kp~~C~~C~k~-------F~~~~~L~~H~~~~H~~e~~   36 (48)
T 3iuf_A            1 GEDRDKPYACDICGKR-------YKNRPGLSYHYAHSHLAEEE   36 (48)
T ss_dssp             -CTTTSCEECTTTCCE-------ESSHHHHHHHHHHSSCC---
T ss_pred             CCCCCcCEECCCcCcc-------cCCHHHHHHHhhhhcCCCCC
Confidence            5899999999966555       99999999998757888764

>2els_A Zinc finger protein 406; ZFAT zinc finger 1, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=98.26  E-value=9.8e-08  Score=50.84  Aligned_cols=34  Identities=18%  Similarity=0.204  Sum_probs=29.5

Q ss_pred             hhcCCCCCCCCCCCCCCCCCCccCCCCChhhhccccccCCCC
Q 044013           47 IHRKDRAKNRPPSSSSISDKLTFFPSPSTWDDHQRSVHTNNN   88 (153)
Q Consensus        47 ~H~gekp~~C~~c~~~~Cgk~~~F~~~~~L~~H~~~~Ht~~k   88 (153)
                      .|++++||.|+.|++.       |.....|..|++ +|++++
T Consensus         3 ~~~~~k~~~C~~C~k~-------f~~~~~l~~H~~-~H~~~k   36 (36)
T 2els_A            3 SGSSGKIFTCEYCNKV-------FKFKHSLQAHLR-IHTNEK   36 (36)
T ss_dssp             TTSCCCCEECTTTCCE-------ESSHHHHHHHHH-HHCCCC
T ss_pred             CCCCCCCEECCCCCce-------eCCHHHHHHHHH-HhCCCC
Confidence            5788999999966666       999999999999 999874

>1x6f_A Zinc finger protein 462; zinc finger domain, KIAA1803, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: g.37.1.1

Probab=98.24  E-value=1.2e-08  Score=66.65  Aligned_cols=46  Identities=9%  Similarity=0.081  Sum_probs=38.1

Q ss_pred             HHHhhcCCCCCCCCCCCCCCCCCCccCCCCChhhhccccccCCCCCCCCCCCCcc
Q 044013           44 HMNIHRKDRAKNRPPSSSSISDKLTFFPSPSTWDDHQRSVHTNNNNHSNYDSYGQ   98 (153)
Q Consensus        44 H~r~H~gekp~~C~~c~~~~Cgk~~~F~~~~~L~~H~~~~Ht~~kp~~~~~~~~~   98 (153)
                      |.++|++++||.|+.|++.       |.....|..|++ +|++++|| .|..|.+
T Consensus        16 ~~~~H~~~kpy~C~~C~k~-------F~~~~~L~~H~~-~Ht~ekp~-~C~~~~~   61 (88)
T 1x6f_A           16 GNGPRLQNSTYQCKHCDSK-------LQSTAELTSHLN-IHNEEFQK-RAKRQER   61 (88)
T ss_dssp             CCCSCCCCSCEECSSSCCE-------ESSHHHHHHHHH-HHHHHHHH-HCCCCSC
T ss_pred             cccccCCCCCCcCCCCCCE-------eCCHHHHHHHHH-HhCCCCCc-ccchhhh
Confidence            4567999999999966666       999999999999 99999999 4544443

>2epa_A Krueppel-like factor 10; transforming growth factor-beta-inducible early growth response protein 1, TGFB-inducible early growth response protein 1; NMR {Homo sapiens}

Probab=98.20  E-value=1.5e-07  Score=57.91  Aligned_cols=50  Identities=12%  Similarity=0.146  Sum_probs=40.9

Q ss_pred             hhcCCCCCCCCC--CCCCCCCCCccCCCCChhhhccccccCCCCCCCCCCC--CccccccCCc
Q 044013           47 IHRKDRAKNRPP--SSSSISDKLTFFPSPSTWDDHQRSVHTNNNNHSNYDS--YGQNYHQHLN  105 (153)
Q Consensus        47 ~H~gekp~~C~~--c~~~~Cgk~~~F~~~~~L~~H~~~~Ht~~kp~~~~~~--~~~~f~~~~~  105 (153)
                      .+...++|.|..  |++.       |.....|..|++ +|++++|| .|.+  |++.|.+...
T Consensus        11 ~~~~~~~~~C~~~~C~k~-------f~~~~~L~~H~~-~H~~~~~~-~C~~~~C~k~f~~~~~   64 (72)
T 2epa_A           11 DSSRIRSHICSHPGCGKT-------YFKSSHLKAHTR-THTGEKPF-SCSWKGCERRFARSDE   64 (72)
T ss_dssp             CCCCCCCEECSSTTTCCE-------ESSHHHHHHHHH-HHSSSCSE-ECCCTTCCCEESSHHH
T ss_pred             CccccCceeCCCCCCccc-------cCCHHHHHHHHH-hcCCCCCc-cCCCCCCCcccCCHHH
Confidence            456788999985  5555       999999999999 99999999 6765  9999965433

>1va1_A Transcription factor SP1; C2H2 type zinc finger, DNA-binding protein; NMR {Homo sapiens}

Probab=98.12  E-value=2e-07  Score=50.18  Aligned_cols=34  Identities=18%  Similarity=0.127  Sum_probs=29.2

Q ss_pred             hhcCCCCCCCCC--CCCCCCCCCccCCCCChhhhccccccCCCC
Q 044013           47 IHRKDRAKNRPP--SSSSISDKLTFFPSPSTWDDHQRSVHTNNN   88 (153)
Q Consensus        47 ~H~gekp~~C~~--c~~~~Cgk~~~F~~~~~L~~H~~~~Ht~~k   88 (153)
                      .|++++||.|..  |++.       |...+.|..|++ +|++++
T Consensus         2 ~~~~~k~~~C~~~~C~k~-------f~~~~~L~~H~~-~H~~ek   37 (37)
T 1va1_A            2 DPGKKKQHICHIQGCGKV-------YGKTSHLRAHLR-WHTGER   37 (37)
T ss_dssp             CSSSCCCEECCSTTCCCE-------ESCHHHHHHHHH-HHHTTC
T ss_pred             CCCCCCCCCCCCCCCCCc-------cCCHHHHHHHHH-hcCCCC
Confidence            378999999983  6666       999999999999 999874

>1zfd_A SWI5; DNA binding motif, zinc finger DNA binding domain; NMR {Saccharomyces cerevisiae} SCOP: g.37.1.1

Probab=98.07  E-value=1.6e-06  Score=44.55  Aligned_cols=30  Identities=17%  Similarity=0.241  Sum_probs=26.3

Q ss_pred             CCCCCCC--CCCCCCCCCCccCCCCChhhhccccccCCCC
Q 044013           51 DRAKNRP--PSSSSISDKLTFFPSPSTWDDHQRSVHTNNN   88 (153)
Q Consensus        51 ekp~~C~--~c~~~~Cgk~~~F~~~~~L~~H~~~~Ht~~k   88 (153)
                      ++||.|.  .|++.       |.....|..|++ +|++++
T Consensus         1 ek~~~C~~~~C~k~-------f~~~~~L~~H~~-~H~~~~   32 (32)
T 1zfd_A            1 DRPYSCDHPGCDKA-------FVRNHDLIRHKK-SHQEKA   32 (32)
T ss_dssp             CCSBCCCCTTCCCC-------BSSSHHHHHHHG-GGTCCC
T ss_pred             CCCCcCcCCCCCCc-------cCCHHHHHHHHH-HccCCC
Confidence            5799998  67777       999999999999 999874

>2epp_A POZ-, at HOOK-, and zinc finger-containing protein 1; C2H2, zinc finger domain, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: g.37.1.1

Probab=98.04  E-value=1.1e-06  Score=54.32  Aligned_cols=36  Identities=11%  Similarity=0.042  Sum_probs=30.9

Q ss_pred             hhcCCCCCCCCCCCCCCCCCCccCCCCChhhhccccccCCCCCC
Q 044013           47 IHRKDRAKNRPPSSSSISDKLTFFPSPSTWDDHQRSVHTNNNNH   90 (153)
Q Consensus        47 ~H~gekp~~C~~c~~~~Cgk~~~F~~~~~L~~H~~~~Ht~~kp~   90 (153)
                      .|++++||.|..|++.       |.+...|..|++ +|+++...
T Consensus         7 ~~~~ekpy~C~~CgK~-------F~~~s~L~~H~r-~Htg~~~~   42 (66)
T 2epp_A            7 GLREAGILPCGLCGKV-------FTDANRLRQHEA-QHGVTSLQ   42 (66)
T ss_dssp             SCCCCCCCCCTTTCCC-------CSCHHHHHHHHH-HHTTTSCC
T ss_pred             CCCCccCcCCCCCCCc-------cCCHHHHHhhhh-hhCCCccc
Confidence            4788999999966666       999999999999 99997653

>2m0e_A Zinc finger and BTB domain-containing protein 17; C2H2 zinc fingers, transcription; NMR {Homo sapiens}

Probab=98.04  E-value=1.5e-06  Score=43.24  Aligned_cols=29  Identities=14%  Similarity=0.369  Sum_probs=24.7

Q ss_pred             CCCCCCCCCCCCCCCCccCCCCChhhhccccccCCCC
Q 044013           52 RAKNRPPSSSSISDKLTFFPSPSTWDDHQRSVHTNNN   88 (153)
Q Consensus        52 kp~~C~~c~~~~Cgk~~~F~~~~~L~~H~~~~Ht~~k   88 (153)
                      +||.|+.|++.       |.....|..|++ +|++++
T Consensus         1 k~~~C~~C~~~-------f~~~~~l~~H~~-~h~~~~   29 (29)
T 2m0e_A            1 KEHKCPHCDKK-------FNQVGNLKAHLK-IHIADG   29 (29)
T ss_dssp             CCCCCSSCCCC-------CCTTTHHHHHHH-HHHSCC
T ss_pred             CCCcCCCCCcc-------cCCHHHHHHHHH-HhccCC
Confidence            68999966665       999999999999 998764

>2lvr_A Zinc finger and BTB domain-containing protein 17; C2H2 zinc finger, classical zinc finger, transcription; NMR {Homo sapiens}

Probab=97.29  E-value=6.7e-07  Score=45.09  Aligned_cols=30  Identities=20%  Similarity=0.327  Sum_probs=25.3

Q ss_pred             CCCCCCCCCCCCCCCCCccCCCCChhhhccccccCCCC
Q 044013           51 DRAKNRPPSSSSISDKLTFFPSPSTWDDHQRSVHTNNN   88 (153)
Q Consensus        51 ekp~~C~~c~~~~Cgk~~~F~~~~~L~~H~~~~Ht~~k   88 (153)
                      ++||.|..|++.       |.....|..|++ +|++++
T Consensus         1 ~k~~~C~~C~k~-------f~~~~~l~~H~~-~h~~~k   30 (30)
T 2lvr_A            1 MKPYVCIHCQRQ-------FADPGALQRHVR-IHTGEK   30 (30)
Confidence            479999966655       999999999999 998764

>1klr_A Zinc finger Y-chromosomal protein; transcription; NMR {Synthetic} SCOP: g.37.1.1 PDB: 5znf_A 1kls_A 1xrz_A* 7znf_A

Probab=98.02  E-value=1.7e-06  Score=43.33  Aligned_cols=30  Identities=7%  Similarity=0.059  Sum_probs=25.5

Q ss_pred             CCCCCCCCCCCCCCCCccCCCCChhhhccccccCCCCC
Q 044013           52 RAKNRPPSSSSISDKLTFFPSPSTWDDHQRSVHTNNNN   89 (153)
Q Consensus        52 kp~~C~~c~~~~Cgk~~~F~~~~~L~~H~~~~Ht~~kp   89 (153)
                      +||.|..|++.       |...+.|..|++ +|++++|
T Consensus         1 k~~~C~~C~k~-------f~~~~~l~~H~~-~h~~~~~   30 (30)
T 1klr_A            1 KTYQCQYCEFR-------SADSSNLKTHIK-TKHSKEK   30 (30)
T ss_dssp             CCCCCSSSSCC-------CSCSHHHHHHHH-HHTSSCC
T ss_pred             CCccCCCCCCc-------cCCHHHHHHHHH-HHccCCC
Confidence            58999966655       999999999999 9988764

>2lvt_A Zinc finger and BTB domain-containing protein 17; C2H2 zinc finger, transcription; NMR {Homo sapiens}

Probab=97.27  E-value=7.3e-07  Score=44.81  Aligned_cols=29  Identities=21%  Similarity=0.243  Sum_probs=24.6

Q ss_pred             CCCCCCCCCCCCCCCCccCCCCChhhhccccccCCCC
Q 044013           52 RAKNRPPSSSSISDKLTFFPSPSTWDDHQRSVHTNNN   88 (153)
Q Consensus        52 kp~~C~~c~~~~Cgk~~~F~~~~~L~~H~~~~Ht~~k   88 (153)
                      +||.|..|++.       |....+|..|++ +|++++
T Consensus         1 k~~~C~~C~k~-------f~~~~~l~~H~~-~H~~~k   29 (29)
T 2lvt_A            1 KPCQCVMCGKA-------FTQASSLIAHVR-QHTGEK   29 (29)
Confidence            58999966655       999999999999 998864

>2m0d_A Zinc finger and BTB domain-containing protein 17; C2H2 zinc fingers, transcription; NMR {Homo sapiens}

Probab=98.00  E-value=8.7e-07  Score=44.48  Aligned_cols=30  Identities=17%  Similarity=0.236  Sum_probs=25.7

Q ss_pred             CCCCCCCCCCCCCCCCCccCCCCChhhhccccccCCCC
Q 044013           51 DRAKNRPPSSSSISDKLTFFPSPSTWDDHQRSVHTNNN   88 (153)
Q Consensus        51 ekp~~C~~c~~~~Cgk~~~F~~~~~L~~H~~~~Ht~~k   88 (153)
                      ++||.|..|++.       |.....|..|++ +|++++
T Consensus         1 ~k~~~C~~C~~~-------f~~~~~l~~H~~-~h~~~k   30 (30)
T 2m0d_A            1 MKPYQCDYCGRS-------FSDPTSKMRHLE-THDTDK   30 (30)
T ss_dssp             CCCEECTTTCCE-------ESCHHHHHHHHH-TTCCCC
T ss_pred             CcCccCCCCCcc-------cCCHHHHHHHHH-HhccCC
Confidence            579999966666       999999999999 998864

>1sp2_A SP1F2; zinc finger, transcription activation; NMR {Homo sapiens} SCOP: g.37.1.1 PDB: 1va2_A

Probab=97.99  E-value=2.1e-06  Score=43.85  Aligned_cols=29  Identities=21%  Similarity=0.290  Sum_probs=25.1

Q ss_pred             CCCCCC--CCCCCCCCCCccCCCCChhhhccccccCCCC
Q 044013           52 RAKNRP--PSSSSISDKLTFFPSPSTWDDHQRSVHTNNN   88 (153)
Q Consensus        52 kp~~C~--~c~~~~Cgk~~~F~~~~~L~~H~~~~Ht~~k   88 (153)
                      +||.|+  .|++.       |...+.|..|++ +|++++
T Consensus         1 kp~~C~~~~C~k~-------f~~~~~L~~H~~-~H~~~k   31 (31)
T 1sp2_A            1 RPFMCTWSYCGKR-------FTRSDELQRHKR-THTGEK   31 (31)
T ss_dssp             CCCBCCSTTCCCB-------CSSHHHHHHHHT-TTSCCC
T ss_pred             CCcCCcCCCCCcc-------cCCHhHHHHHHH-HhcCCC
Confidence            589997  67766       999999999999 999874

>1rik_A E6APC1 peptide; E6-binding domain, zinc finger, human papillomavirus, HPV E6 protein, de novo protein; NMR {Synthetic} SCOP: k.12.1.1 PDB: 1sp1_A 1va3_A

Probab=97.98  E-value=9.8e-07  Score=44.16  Aligned_cols=29  Identities=17%  Similarity=0.172  Sum_probs=24.7

Q ss_pred             CCCCCCCCCCCCCCCCccCCCCChhhhccccccCCCC
Q 044013           52 RAKNRPPSSSSISDKLTFFPSPSTWDDHQRSVHTNNN   88 (153)
Q Consensus        52 kp~~C~~c~~~~Cgk~~~F~~~~~L~~H~~~~Ht~~k   88 (153)
                      +||.|+.|++.       |.....|..|++ +|++++
T Consensus         1 k~~~C~~C~k~-------f~~~~~l~~H~~-~H~~~k   29 (29)
T 1rik_A            1 YKFACPECPKR-------FMRSDHLTLHIL-LHENKK   29 (29)
T ss_dssp             CCEECSSSSCE-------ESCSHHHHHHHT-GGGSCC
T ss_pred             CCccCCCCCch-------hCCHHHHHHHHH-HhcCCC
Confidence            58999966655       999999999999 998864

>1paa_A Yeast transcription factor ADR1; transcription regulation; NMR {Saccharomyces cerevisiae} SCOP: g.37.1.1

Probab=97.96  E-value=3.5e-06  Score=42.36  Aligned_cols=29  Identities=21%  Similarity=0.256  Sum_probs=24.4

Q ss_pred             CCCCCCCCCCCCCCCCccCCCCChhhhc-cccccCCCC
Q 044013           52 RAKNRPPSSSSISDKLTFFPSPSTWDDH-QRSVHTNNN   88 (153)
Q Consensus        52 kp~~C~~c~~~~Cgk~~~F~~~~~L~~H-~~~~Ht~~k   88 (153)
                      +||.|..|++.       |...+.|..| ++ +|++++
T Consensus         1 k~~~C~~C~k~-------f~~~~~l~~H~~~-~H~~~~   30 (30)
T 1paa_A            1 KAYACGLCNRA-------FTRRDLLIRHAQK-IHSGNL   30 (30)
T ss_dssp             CCSBCTTTCCB-------CSSSHHHHHHHTT-TSCCCC
T ss_pred             CCcCCcccCcc-------cCChHHHHHHHHH-HccCCC
Confidence            58999966666       9999999999 67 998864

>1ard_A Yeast transcription factor ADR1; transcription regulation; NMR {Saccharomyces cerevisiae} SCOP: g.37.1.1 PDB: 1arf_A 1are_A

Probab=97.96  E-value=1.7e-06  Score=43.15  Aligned_cols=29  Identities=24%  Similarity=0.307  Sum_probs=24.7

Q ss_pred             CCCCCCCCCCCCCCCCccCCCCChhhhccccccCCCC
Q 044013           52 RAKNRPPSSSSISDKLTFFPSPSTWDDHQRSVHTNNN   88 (153)
Q Consensus        52 kp~~C~~c~~~~Cgk~~~F~~~~~L~~H~~~~Ht~~k   88 (153)
                      +||.|+.|++.       |.....|..|++ +|++++
T Consensus         1 k~~~C~~C~~~-------f~~~~~l~~H~~-~h~~~k   29 (29)
T 1ard_A            1 RSFVCEVCTRA-------FARQEHLKRHYR-SHTNEK   29 (29)
T ss_dssp             CCCBCTTTCCB-------CSSHHHHHHHHH-HHSCCC
T ss_pred             CCeECCCCCcc-------cCCHHHHHHHHH-HhcCCC
Confidence            58999966666       999999999999 998864

>2d9k_A FLN29 gene product; zinc finger, ZF-TRAF, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=97.85  E-value=1.3e-07  Score=59.74  Aligned_cols=59  Identities=10%  Similarity=0.045  Sum_probs=47.3

Q ss_pred             hHHHHHHHhhcCCCCCCCCCCCCCCCCCCccCCCCChhhhccccccCCCCCCCCCCCCccccccCCcccchh
Q 044013           39 QALGGHMNIHRKDRAKNRPPSSSSISDKLTFFPSPSTWDDHQRSVHTNNNNHSNYDSYGQNYHQHLNMIGDE  110 (153)
Q Consensus        39 ~~L~~H~r~H~gekp~~C~~c~~~~Cgk~~~F~~~~~L~~H~~~~Ht~~kp~~~~~~~~~~f~~~~~~~~~~  110 (153)
                      ..|..|+++|.+++|+.|+.|+..       |. ...|..|+  .|.+++|+ .|..|++.|.+  ..+..+
T Consensus         3 ~~L~~H~~~~c~~r~~~C~~C~~~-------~~-~~~L~~H~--~~c~~~~~-~C~~C~~~~~~--~~l~~H   61 (75)
T 2d9k_A            3 SGSSGHEETECPLRLAVCQHCDLE-------LS-ILKLKEHE--DYCGARTE-LCGNCGRNVLV--KDLKTH   61 (75)
T ss_dssp             CCCSCCCCCCCCCCCEECSSSCCE-------EC-HHHHHHHH--HHHHHCEE-ECSSSCCEEET--TGGGTH
T ss_pred             hHHHhhCcccCCCcccCCcccChH-------hh-HHHHHHHH--hHcCCCce-EcccCCCcCcH--HHHHHH
Confidence            357789999999999999966666       84 88899998  58999999 78899999853  334444

>2kvf_A Zinc finger and BTB domain-containing protein 32; protein/DNA, metal-binding, transcription; NMR {Mus musculus}

Probab=97.83  E-value=2.1e-06  Score=42.66  Aligned_cols=28  Identities=25%  Similarity=0.300  Sum_probs=23.7

Q ss_pred             CCCCCCCCCCCCCCCCCccCCCCChhhhccccccCC
Q 044013           51 DRAKNRPPSSSSISDKLTFFPSPSTWDDHQRSVHTN   86 (153)
Q Consensus        51 ekp~~C~~c~~~~Cgk~~~F~~~~~L~~H~~~~Ht~   86 (153)
                      ++||.|..|++.       |.....|..|++ +|++
T Consensus         1 ~k~~~C~~C~k~-------f~~~~~l~~H~~-~h~~   28 (28)
T 2kvf_A            1 MRPYSCSVCGKR-------FSLKHQMETHYR-VHTG   28 (28)
T ss_dssp             CCSEECSSSCCE-------ESCHHHHHHHHT-TSCC
T ss_pred             CcCccCCCCCcc-------cCCHHHHHHHHH-hcCC
Confidence            579999966655       999999999999 8875

>1znf_A 31ST zinc finger from XFIN; zinc finger DNA binding domain; NMR {Xenopus laevis} SCOP: g.37.1.1

Probab=97.78  E-value=6e-06  Score=40.45  Aligned_cols=27  Identities=33%  Similarity=0.345  Sum_probs=21.6

Q ss_pred             CCCCCCCCCCCCCCCccCCCCChhhhccccccCCC
Q 044013           53 AKNRPPSSSSISDKLTFFPSPSTWDDHQRSVHTNN   87 (153)
Q Consensus        53 p~~C~~c~~~~Cgk~~~F~~~~~L~~H~~~~Ht~~   87 (153)
                      ||.|..|++.       |.....|..|++ +|+++
T Consensus         1 ~~~C~~C~k~-------f~~~~~l~~H~~-~h~~~   27 (27)
T 1znf_A            1 XYKCGLCERS-------FVEKSALSRHQR-VHKNX   27 (27)
T ss_dssp             -CBCSSSCCB-------CSSHHHHHHHGG-GTCC-
T ss_pred             CccCCCCCCc-------CCCHHHHHHHHH-HcCCC
Confidence            6889965555       999999999999 99864

>2m0f_A Zinc finger and BTB domain-containing protein 17; C2H2 zinc fingers, transcription; NMR {Homo sapiens}

Probab=97.78  E-value=1.5e-06  Score=43.25  Aligned_cols=29  Identities=14%  Similarity=0.305  Sum_probs=24.6

Q ss_pred             CCCCCCCCCCCCCCCCccCCCCChhhhccccccCCCC
Q 044013           52 RAKNRPPSSSSISDKLTFFPSPSTWDDHQRSVHTNNN   88 (153)
Q Consensus        52 kp~~C~~c~~~~Cgk~~~F~~~~~L~~H~~~~Ht~~k   88 (153)
                      +||.|+.|++.       |.....|..|++ +|++++
T Consensus         1 ~~~~C~~C~k~-------f~~~~~l~~H~~-~H~~~k   29 (29)
T 2m0f_A            1 GPLKCRECGKQ-------FTTSGNLKRHLR-IHSGEK   29 (29)
T ss_dssp             CCEECTTTSCE-------ESCHHHHHHHHH-HHHTCC
T ss_pred             CCccCCCCCCc-------cCChhHHHHHHH-HhcCCC
Confidence            58899966655       999999999999 998864

>1fv5_A First zinc finger of U-shaped; CCHC, protein interaction, transcription; NMR {Drosophila melanogaster} SCOP: g.37.1.2 PDB: 1y0j_B 2l6z_B

Probab=97.77  E-value=2.6e-06  Score=46.38  Aligned_cols=26  Identities=35%  Similarity=0.346  Sum_probs=22.8

Q ss_pred             hcCCCCCCCCCCCCCCCCCCccCCCCChhhhcc
Q 044013           48 HRKDRAKNRPPSSSSISDKLTFFPSPSTWDDHQ   80 (153)
Q Consensus        48 H~gekp~~C~~c~~~~Cgk~~~F~~~~~L~~H~   80 (153)
                      +++++||.|+.|+++       |.+.++|..|+
T Consensus         3 ~~gekp~~C~~CgK~-------F~~~s~L~~H~   28 (36)
T 1fv5_A            3 LLKPARFMCLPCGIA-------FSSPSTLEAHQ   28 (36)
T ss_dssp             SSSCCCCEETTTTEE-------CSCHHHHHHHH
T ss_pred             CCCccCeECCCCCCc-------cCCHhHccCcC
Confidence            578999999966666       99999999997

>2lvu_A Zinc finger and BTB domain-containing protein 17; C2H2 zinc finger, transcription; NMR {Homo sapiens}

Probab=96.95  E-value=3.7e-06  Score=41.08  Aligned_cols=26  Identities=19%  Similarity=0.226  Sum_probs=21.9

Q ss_pred             CCCCCCCCCCCCCCCCccCCCCChhhhccccccC
Q 044013           52 RAKNRPPSSSSISDKLTFFPSPSTWDDHQRSVHT   85 (153)
Q Consensus        52 kp~~C~~c~~~~Cgk~~~F~~~~~L~~H~~~~Ht   85 (153)
                      +||.|+.|++.       |...+.|..|++ +|+
T Consensus         1 kp~~C~~C~k~-------f~~~~~l~~H~~-~H~   26 (26)
T 2lvu_A            1 KPYVCERCGKR-------FVQSSQLANHIR-HHD   26 (26)
Confidence            58999966666       999999999998 774

>2kvh_A Zinc finger and BTB domain-containing protein 32; protein/DNA, metal-binding, transcription; NMR {Mus musculus}

Probab=97.75  E-value=2.5e-06  Score=42.12  Aligned_cols=27  Identities=15%  Similarity=0.113  Sum_probs=22.9

Q ss_pred             CCCCCCCCCCCCCCCCCccCCCCChhhhccccccC
Q 044013           51 DRAKNRPPSSSSISDKLTFFPSPSTWDDHQRSVHT   85 (153)
Q Consensus        51 ekp~~C~~c~~~~Cgk~~~F~~~~~L~~H~~~~Ht   85 (153)
                      ++||.|..|++.       |.....|..|++ +|+
T Consensus         1 ek~~~C~~C~k~-------f~~~~~l~~H~~-~H~   27 (27)
T 2kvh_A            1 EKPFSCSLCPQR-------SRDFSAMTKHLR-THG   27 (27)
T ss_dssp             CCCEECSSSSCE-------ESSHHHHHHHHH-HCC
T ss_pred             CcCccCCCcChh-------hCCHHHHHHHHH-Hcc
Confidence            579999966655       999999999998 875

>2kvg_A Zinc finger and BTB domain-containing protein 32; protein/DNA, metal-binding, transcription; NMR {Mus musculus}

Probab=97.72  E-value=2.1e-06  Score=42.64  Aligned_cols=27  Identities=22%  Similarity=0.309  Sum_probs=22.8

Q ss_pred             CCCCCCCCCCCCCCCCCccCCCCChhhhccccccC
Q 044013           51 DRAKNRPPSSSSISDKLTFFPSPSTWDDHQRSVHT   85 (153)
Q Consensus        51 ekp~~C~~c~~~~Cgk~~~F~~~~~L~~H~~~~Ht   85 (153)
                      ++||.|+.|++.       |...+.|..|++ +|+
T Consensus         1 ~k~~~C~~C~k~-------f~~~~~l~~H~~-~H~   27 (27)
T 2kvg_A            1 AAPYRCPLCRAG-------CPSLASMQAHMR-GHS   27 (27)
T ss_dssp             CCTEEETTTTEE-------ESCHHHHHHHHT-TCC
T ss_pred             CcCcCCCCCCcc-------cCCHHHHHHHHH-hcC
Confidence            579999966555       999999999999 874

>1zw8_A Zinc-responsive transcriptional regulator ZAP1; interacting C2H2 zinc fingers, beta-BETA-alpha, solution structure; NMR {Saccharomyces cerevisiae}

Probab=97.22  E-value=0.00011  Score=44.80  Aligned_cols=51  Identities=16%  Similarity=0.202  Sum_probs=39.5

Q ss_pred             eeccc--cccccCChhHHHHHH-HhhcCCC------CCCCCCCCCCCCCCCccCCCCChhhhccc
Q 044013           26 YECVF--CKRGFTTAQALGGHM-NIHRKDR------AKNRPPSSSSISDKLTFFPSPSTWDDHQR   81 (153)
Q Consensus        26 ~~C~~--Cgk~F~~~~~L~~H~-r~H~gek------p~~C~~c~~~~Cgk~~~F~~~~~L~~H~~   81 (153)
                      |.|..  |++.|.+...|..|+ +.|.+.+      +|.|.+-+   |++.  +.....|..|++
T Consensus         2 l~C~W~~C~~~f~~~~~l~~Hv~~~Hv~~~~~~~~~~~~C~W~~---C~~~--~~~~~~L~~Hir   61 (64)
T 1zw8_A            2 LKCKWKECPESASSLFDLQRHLLKDHVSQDFKHPMEPLACNWED---CDFL--GDDTASIVNHIN   61 (64)
T ss_dssp             CCCCCTTCCCCCSSHHHHHHHHHHHSCCCCCCCSSCCEECCCSS---CCCE--ESSHHHHHHHHH
T ss_pred             CeEeeCCCCCcCCCHHHHHHHHHhhccCcccCCCCCCCEeeCCC---CcCC--CCChHHHHhhcc
Confidence            45664  999999999999998 4898776      78897543   3333  666778999987

>2ab3_A ZNF29; zinc finger protein, beta BETA alpha, RREIIB-TR, RNA binding protein; NMR {Escherichia coli} SCOP: k.12.1.1 PDB: 2ab7_A

Probab=97.17  E-value=2.8e-05  Score=38.44  Aligned_cols=27  Identities=19%  Similarity=0.266  Sum_probs=23.1

Q ss_pred             CCCCCC--CCCCCCCCCCccCCCCChhhhccccccCC
Q 044013           52 RAKNRP--PSSSSISDKLTFFPSPSTWDDHQRSVHTN   86 (153)
Q Consensus        52 kp~~C~--~c~~~~Cgk~~~F~~~~~L~~H~~~~Ht~   86 (153)
                      +||.|.  .|++.       |...+.|..|++ +|++
T Consensus         1 k~~~C~~~~C~k~-------f~~~~~l~~H~~-~H~~   29 (29)
T 2ab3_A            1 MVYVCHFENCGRS-------FNDRRKLNRHKK-IHTG   29 (29)
T ss_dssp             CCEEECSTTTCEE-------ESSHHHHHHHHG-GGTC
T ss_pred             CCCCCcCCcCcCc-------cCCHHHHHHHHH-HhCC
Confidence            478888  77777       999999999999 8874

>1zr9_A Zinc finger protein 593; DNA binding, structural genomics, PSI, protein structure initiative, center for eukaryotic structural genomics, CESG; NMR {Homo sapiens} SCOP: g.37.1.4

Probab=96.74  E-value=0.00039  Score=47.99  Aligned_cols=24  Identities=29%  Similarity=0.576  Sum_probs=13.1

Q ss_pred             CcceeccccccccCChhHHHHHHH
Q 044013           23 GRSYECVFCKRGFTTAQALGGHMN   46 (153)
Q Consensus        23 ekp~~C~~Cgk~F~~~~~L~~H~r   46 (153)
                      ++||.|..|++.|.+...|..|++
T Consensus        48 ekpfyC~~C~K~F~~~~~L~~H~r   71 (124)
T 1zr9_A           48 GGLHRCLACARYFIDSTNLKTHFR   71 (124)
T ss_dssp             GGCSEETTTTEECSSHHHHHHHTT
T ss_pred             CcceEcccCcchhCCHHHHHHHHh
Confidence            455555555555555555555544

>1zr9_A Zinc finger protein 593; DNA binding, structural genomics, PSI, protein structure initiative, center for eukaryotic structural genomics, CESG; NMR {Homo sapiens} SCOP: g.37.1.4

Probab=95.30  E-value=0.0016  Score=44.86  Aligned_cols=29  Identities=10%  Similarity=0.006  Sum_probs=25.4

Q ss_pred             HhhcCCCCCCCCCCCCCCCCCCccCCCCChhhhccc
Q 044013           46 NIHRKDRAKNRPPSSSSISDKLTFFPSPSTWDDHQR   81 (153)
Q Consensus        46 r~H~gekp~~C~~c~~~~Cgk~~~F~~~~~L~~H~~   81 (153)
                      ..|+|++||.|..|++.       |.+.++|..|++
T Consensus        43 ed~tGekpfyC~~C~K~-------F~~~~~L~~H~r   71 (124)
T 1zr9_A           43 PDLPGGGLHRCLACARY-------FIDSTNLKTHFR   71 (124)
T ss_dssp             SSSGGGGCSEETTTTEE-------CSSHHHHHHHTT
T ss_pred             ccCCCCcceEcccCcch-------hCCHHHHHHHHh
Confidence            46899999999966666       999999999987

>2e72_A POGO transposable element with ZNF domain; zinc finger domain, structural genomics, NPPSFA; NMR {Homo sapiens}

Probab=95.10  E-value=0.012  Score=33.59  Aligned_cols=24  Identities=33%  Similarity=0.558  Sum_probs=22.0

Q ss_pred             cceeccccccccCChhHHHHHHHh
Q 044013           24 RSYECVFCKRGFTTAQALGGHMNI   47 (153)
Q Consensus        24 kp~~C~~Cgk~F~~~~~L~~H~r~   47 (153)
                      .+|.|+.|++.|.....|+.||+.
T Consensus        11 ~~~~CPrCn~~f~~~~sLr~Hmky   34 (49)
T 2e72_A           11 GRKICPRCNAQFRVTEALRGHMCY   34 (49)
T ss_dssp             SCCCCTTTCCCCSSHHHHHHHHHH
T ss_pred             CceeCCcccccccchHHHHhhhhh
Confidence            478999999999999999999983

>1zu1_A DSRBP-ZFA, RNA binding protein ZFA; zinc finger protein, helix-loop-helix, helix-turn-helix; NMR {Xenopus laevis} SCOP: g.37.1.4 g.37.1.4

Probab=94.50  E-value=0.014  Score=40.17  Aligned_cols=70  Identities=10%  Similarity=0.153  Sum_probs=41.4

Q ss_pred             CcceeccccccccCChhHHHHHH--HhhcCC-CCCCCCCCCCC--CCCCCccCCCCChhhhccccccCCCCCCCCCCCCc
Q 044013           23 GRSYECVFCKRGFTTAQALGGHM--NIHRKD-RAKNRPPSSSS--ISDKLTFFPSPSTWDDHQRSVHTNNNNHSNYDSYG   97 (153)
Q Consensus        23 ekp~~C~~Cgk~F~~~~~L~~H~--r~H~ge-kp~~C~~c~~~--~Cgk~~~F~~~~~L~~H~~~~Ht~~kp~~~~~~~~   97 (153)
                      .+++.|.+|...|.....+..|.  +.|... +.|.+. ++..  .-++.  |...    .+.. .+.+.+.| .|.+|.
T Consensus        30 ~~~~~C~~C~v~~~S~s~~~~H~~gkkH~~~v~~~~~~-~~~~~~~~~~~--~~~~----~~~~-~~~~~~~~-~C~~C~  100 (127)
T 1zu1_A           30 FSDTQCKVCSAVLISESQKLAHYQSRKHANKVRRYMAI-NQGEDSVPAKK--FKAA----PAEI-SDGEDRSK-CCPVCN  100 (127)
T ss_dssp             BCSSEETTTTEECCSHHHHHHHHHCHHHHHHHHHHHHH-TTCCCCCSCCC--CSCC----SSCC-SSCCCTTT-EETTTT
T ss_pred             CCCCcCcCCCCEeCCHHHHHHHHCcHHHHHHHHHHhcc-cCcccCCCCCc--cCCC----cccc-ccCCCCCe-EcCCCC
Confidence            46799999999999999999998  456432 222211 0000  01111  3221    1333 55666666 688999


Q ss_pred             cccc
Q 044013           98 QNYH  101 (153)
Q Consensus        98 ~~f~  101 (153)
                      ..|.
T Consensus       101 ~~f~  104 (127)
T 1zu1_A          101 MTFS  104 (127)
T ss_dssp             EECS
T ss_pred             CEeC
Confidence            9883

>3hcs_A TNF receptor-associated factor 6; cross-brace, beta-BETA-alpha, coiled coil, cytoplasm, metal- binding, UBL conjugation, UBL conjugation pathway; 2.20A {Homo sapiens}

Probab=91.27  E-value=0.07  Score=37.91  Aligned_cols=57  Identities=16%  Similarity=0.179  Sum_probs=25.8

Q ss_pred             cceeccccccccCChhHHHHHHHhhcCCCCCCCCCCCCCCCCCCccCCCCChhhhccccccCCCCCC
Q 044013           24 RSYECVFCKRGFTTAQALGGHMNIHRKDRAKNRPPSSSSISDKLTFFPSPSTWDDHQRSVHTNNNNH   90 (153)
Q Consensus        24 kp~~C~~Cgk~F~~~~~L~~H~r~H~gekp~~C~~c~~~~Cgk~~~F~~~~~L~~H~~~~Ht~~kp~   90 (153)
                      ++..|+.|+..+ ....|..|....-..++..|+.|+..       |.. ..|..|.. +++|..++
T Consensus       109 ~~v~C~~C~~~~-~r~~l~~H~~~~C~~r~~~C~~C~~~-------~~~-~~l~~H~~-~~~~~~~~  165 (170)
T 3hcs_A          109 ALMDCPQCQRPF-QKFHINIHILKDCPRRQVSCDNCAAS-------MAF-EDKEIHDQ-NCPLALEH  165 (170)
T ss_dssp             SEEECTTTCCEE-EGGGHHHHHHHTCTTCEEECTTTCCE-------EEG-GGHHHHHT-TCCC----
T ss_pred             eeeECCCCChHH-HHHHHHHHhhhhCCCCCeECCCCCCc-------cCH-HHHHhHHH-hCcChhhh
Confidence            344555555554 33445555544444444455544333       332 33555655 55555544

>2e72_A POGO transposable element with ZNF domain; zinc finger domain, structural genomics, NPPSFA; NMR {Homo sapiens}

Probab=90.36  E-value=0.081  Score=30.07  Aligned_cols=23  Identities=17%  Similarity=0.198  Sum_probs=20.5

Q ss_pred             CCCCCCCCCCCCCCCCccCCCCChhhhccc
Q 044013           52 RAKNRPPSSSSISDKLTFFPSPSTWDDHQR   81 (153)
Q Consensus        52 kp~~C~~c~~~~Cgk~~~F~~~~~L~~H~~   81 (153)
                      -+|.|+.|+..       |.....|+.||+
T Consensus        11 ~~~~CPrCn~~-------f~~~~sLr~Hmk   33 (49)
T 2e72_A           11 GRKICPRCNAQ-------FRVTEALRGHMC   33 (49)
T ss_dssp             SCCCCTTTCCC-------CSSHHHHHHHHH
T ss_pred             CceeCCccccc-------ccchHHHHhhhh
Confidence            57899977777       999999999997

>3mjh_B Early endosome antigen 1; protein-zinc finger complex, beta BETA alpha fold, beta HAIR RAB5A GTPase, EEA1, protein transport; HET: GTP; 2.03A {Homo sapiens}

Probab=89.09  E-value=0.28  Score=25.84  Aligned_cols=22  Identities=23%  Similarity=0.504  Sum_probs=19.2

Q ss_pred             ceeccccccccCChhHHHHHHH
Q 044013           25 SYECVFCKRGFTTAQALGGHMN   46 (153)
Q Consensus        25 p~~C~~Cgk~F~~~~~L~~H~r   46 (153)
                      .|.|++|.+.|.+...|..|-.
T Consensus         5 GFiCP~C~~~l~s~~~L~~Hye   26 (34)
T 3mjh_B            5 GFICPQCMKSLGSADELFKHYE   26 (34)
T ss_dssp             EEECTTTCCEESSHHHHHHHHH
T ss_pred             ccCCcHHHHHcCCHHHHHHHHH
Confidence            5899999999999999998865

>2gmg_A Hypothetical protein PF0610; winged-helix like protein with metal binding site, structura genomics, PSI, protein structure initiative; NMR {Pyrococcus furiosus} SCOP: a.4.5.82

Probab=87.49  E-value=0.3  Score=32.45  Aligned_cols=12  Identities=25%  Similarity=0.548  Sum_probs=8.1

Q ss_pred             cceecccccccc
Q 044013           24 RSYECVFCKRGF   35 (153)
Q Consensus        24 kp~~C~~Cgk~F   35 (153)
                      .||+|..||..|
T Consensus        66 ~p~~C~~CG~~F   77 (105)
T 2gmg_A           66 KPAQCRKCGFVF   77 (105)
T ss_dssp             CCCBBTTTCCBC
T ss_pred             ECcChhhCcCee
Confidence            466777777666

>2jsp_A Transcriptional regulatory protein ROS; prokaryotic Cys2His2 zinc finger, gene regulation; NMR {Agrobacterium tumefaciens}

Probab=84.59  E-value=0.37  Score=30.91  Aligned_cols=29  Identities=21%  Similarity=0.465  Sum_probs=23.4

Q ss_pred             CcceeccccccccCChhHHHHHHHhhcCCCCC
Q 044013           23 GRSYECVFCKRGFTTAQALGGHMNIHRKDRAK   54 (153)
Q Consensus        23 ekp~~C~~Cgk~F~~~~~L~~H~r~H~gekp~   54 (153)
                      +....|-+||+.|..   |++|+++|.|..|.
T Consensus        19 ~d~iiClecGK~fK~---LkRHL~~~hgltpe   47 (87)
T 2jsp_A           19 DDHIVCLECGGSFKS---LKRHLTTHHSMTPE   47 (87)
T ss_dssp             SSCEECTBTCCEESB---HHHHHHHTTCSCHH
T ss_pred             CCceEecccchhhHH---HHHHHHHccCCCHH
Confidence            345689999999985   88999998777764

>2elu_A Zinc finger protein 406; ZFAT zinc finger 1, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} PDB: 2elw_A

Probab=82.35  E-value=0.8  Score=23.74  Aligned_cols=22  Identities=27%  Similarity=0.649  Sum_probs=19.8

Q ss_pred             eeccccccccCChhHHHHHHHh
Q 044013           26 YECVFCKRGFTTAQALGGHMNI   47 (153)
Q Consensus        26 ~~C~~Cgk~F~~~~~L~~H~r~   47 (153)
                      -.|.+|.+.|+.-.+|..|++-
T Consensus        10 qhcrfckkkysdvknlikhire   31 (37)
T 2elu_A           10 QHCRFCKKKYSDVKNLIKHIRD   31 (37)
T ss_dssp             CEETTTTEECSSHHHHHHHHHH
T ss_pred             HHHHHHHHHHHHHHHHHHHHHH
Confidence            4699999999999999999883

>1yuz_A Nigerythrin; rubrythrin, rubredoxin, hemerythrin, electron transfer, DIIR center, oxidoreductase; 1.40A {Desulfovibrio vulgaris subsp} SCOP: a.25.1.1 g.41.5.1 PDB: 1yv1_A 1yux_A

Probab=80.60  E-value=0.72  Score=33.96  Aligned_cols=27  Identities=11%  Similarity=0.139  Sum_probs=20.4

Q ss_pred             CcceeccccccccCChhHHHHHHHhhcCCCCCCCCCCCCC
Q 044013           23 GRSYECVFCKRGFTTAQALGGHMNIHRKDRAKNRPPSSSS   62 (153)
Q Consensus        23 ekp~~C~~Cgk~F~~~~~L~~H~r~H~gekp~~C~~c~~~   62 (153)
                      ...|.|.+||..+.             |..|+.||.|+..
T Consensus       169 ~~~~~C~~CG~i~~-------------g~~p~~CP~C~~~  195 (202)
T 1yuz_A          169 DKFHLCPICGYIHK-------------GEDFEKCPICFRP  195 (202)
T ss_dssp             CCEEECSSSCCEEE-------------SSCCSBCTTTCCB
T ss_pred             CcEEEECCCCCEEc-------------CcCCCCCCCCCCC
Confidence            35699999998654             3578999988654

---

Homologous Structure Domains

Structure Domains Detected by RPS-BLAST

Original result of RPS-BLAST against SCOP70(version1.75) database

ID	Length	Definition	E-value
Query	153
d1njqa_	37	g.37.1.3 (A:) SUPERMAN zinc finger domain {Thale c	2e-13

>d1njqa_ g.37.1.3 (A:) SUPERMAN zinc finger domain {Thale cress (Arabidopsis thaliana) [TaxId: 3702]} Length = 37

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Plant C2H2 finger (QALGGH zinc finger)
domain: SUPERMAN zinc finger domain
species: Thale cress (Arabidopsis thaliana) [TaxId: 3702]

 Score = 58.6 bits (142), Expect = 2e-13
 Identities = 24/33 (72%), Positives = 28/33 (84%)

Query: 24 RSYECVFCKRGFTTAQALGGHMNIHRKDRAKNR 56
          RSY C FCKR F +AQALGGHMN+HR+DRA+ R
Sbjct: 4  RSYTCSFCKREFRSAQALGGHMNVHRRDRARLR 36

Homologous Domains Detected by HHsearch

Original result of HHsearch against SCOP70(version1.75) database

ID	Length	Definition	Probability
Query	153
d2csha1	53	Zinc finger protein 297b {Human (Homo sapiens) [Ta	99.7
d2epsa1	39	PATZ1 {Human (Homo sapiens) [TaxId: 9606]}	99.47
d2cota2	38	Zinc finger and SCAN domain-containing protein 16,	99.34
d2adra1	29	ADR1 {Synthetic, based on Saccharomyces cerevisiae	99.27
d1x6ea1	33	Zinc finger protein 24 {Human (Homo sapiens) [TaxI	99.26
d1a1ia2	28	ZIF268 {Mouse (Mus musculus) [TaxId: 10090]}	99.24
d2cota2	38	Zinc finger and SCAN domain-containing protein 16,	99.23
d1sp1a_	29	Transcription factor sp1 {Human (Homo sapiens) [Ta	99.22
d1srka_	35	Zinc finger protein ZFPM1 (FOG-1) {Mouse (Mus musc	99.19
d2dlka2	36	Zinc finger protein 692, ZNF692 {Human (Homo sapie	99.19
d1p7aa_	37	Kruppel-like factor 3, Bklf {Mouse (Mus musculus)	99.15
d1p7aa_	37	Kruppel-like factor 3, Bklf {Mouse (Mus musculus)	99.14
d1x6ea1	33	Zinc finger protein 24 {Human (Homo sapiens) [TaxI	99.14
d1x6ha2	36	Transcriptional repressor CTCF {Human (Homo sapien	99.12
d1x6ea2	26	Zinc finger protein 24 {Human (Homo sapiens) [TaxI	99.07
d2csha1	53	Zinc finger protein 297b {Human (Homo sapiens) [Ta	99.07
d2epsa1	39	PATZ1 {Human (Homo sapiens) [TaxId: 9606]}	99.07
d1x6ha2	36	Transcriptional repressor CTCF {Human (Homo sapien	99.06
d1ncsa_	47	SWI5 zinc-finger domains {Baker's yeast (Saccharom	99.05
d1ubdc3	30	Ying-yang 1 (yy1, zinc finger domain) {Human (Homo	99.03
d2glia3	30	Five-finger GLI1 {Human (Homo sapiens) [TaxId: 960	99.03
d1sp2a_	31	Transcription factor sp1 {Human (Homo sapiens) [Ta	99.0
d2ct1a2	36	Transcriptional repressor CTCF {Human (Homo sapien	98.95
d1srka_	35	Zinc finger protein ZFPM1 (FOG-1) {Mouse (Mus musc	98.94
d2ct1a2	36	Transcriptional repressor CTCF {Human (Homo sapien	98.93
d2adra1	29	ADR1 {Synthetic, based on Saccharomyces cerevisiae	98.87
d1ncsa_	47	SWI5 zinc-finger domains {Baker's yeast (Saccharom	98.87
d1sp1a_	29	Transcription factor sp1 {Human (Homo sapiens) [Ta	98.87
d1a1ia1	29	ZIF268 {Mouse (Mus musculus) [TaxId: 10090]}	98.82
d1zfda_	32	SWI5 zinc-finger domains {Baker's yeast (Saccharom	98.76
d1a1ia2	28	ZIF268 {Mouse (Mus musculus) [TaxId: 10090]}	98.74
d1ubdc4	28	Ying-yang 1 (yy1, zinc finger domain) {Human (Homo	98.7
d2dmda2	26	Zinc finger protein 64, ZFP68 {Human (Homo sapiens	98.61
d2glia3	30	Five-finger GLI1 {Human (Homo sapiens) [TaxId: 960	98.57
d1sp2a_	31	Transcription factor sp1 {Human (Homo sapiens) [Ta	98.55
d2epra1	35	PATZ1 {Human (Homo sapiens) [TaxId: 9606]}	98.51
d1a1ia3	28	ZIF268 {Mouse (Mus musculus) [TaxId: 10090]}	98.51
d2dlka2	36	Zinc finger protein 692, ZNF692 {Human (Homo sapie	98.44
d1ubdc3	30	Ying-yang 1 (yy1, zinc finger domain) {Human (Homo	98.39
d1x6ea2	26	Zinc finger protein 24 {Human (Homo sapiens) [TaxI	98.37
d1zfda_	32	SWI5 zinc-finger domains {Baker's yeast (Saccharom	98.31
d1njqa_	37	SUPERMAN zinc finger domain {Thale cress (Arabidop	98.3
d2epqa1	32	PATZ1 {Human (Homo sapiens) [TaxId: 9606]}	98.26
d1ubdc4	28	Ying-yang 1 (yy1, zinc finger domain) {Human (Homo	98.22
d1ubdc2	28	Ying-yang 1 (yy1, zinc finger domain) {Human (Homo	98.2
d2dmda3	29	Zinc finger protein 64, ZFP68 {Human (Homo sapiens	98.19
d1a1ia1	29	ZIF268 {Mouse (Mus musculus) [TaxId: 10090]}	98.1
d2dlqa4	27	GLI-Krueppel family member HKR3 {Mouse (Mus muscul	98.05
d1bboa1	28	Enhancer binding protein {Human (Homo sapiens) [Ta	97.97
d2dmda2	26	Zinc finger protein 64, ZFP68 {Human (Homo sapiens	97.79
d2dmda1	28	Zinc finger protein 64, ZFP68 {Human (Homo sapiens	97.56
d2dmda3	29	Zinc finger protein 64, ZFP68 {Human (Homo sapiens	97.53
d2glia5	29	Five-finger GLI1 {Human (Homo sapiens) [TaxId: 960	97.53
d1a1ia3	28	ZIF268 {Mouse (Mus musculus) [TaxId: 10090]}	97.48
d2glia4	31	Five-finger GLI1 {Human (Homo sapiens) [TaxId: 960	97.45
d1tf3a2	30	Transcription factor IIIA, TFIIIA {Xenopus laevis	97.37
d1znfa_	26	XFIN, third domain {Xenopus laevis [TaxId: 8355]}	97.35
d2epra1	35	PATZ1 {Human (Homo sapiens) [TaxId: 9606]}	97.34
d2j7ja2	29	Transcription factor IIIA, TFIIIA {Xenopus laevis	97.32
d2dlqa3	30	GLI-Krueppel family member HKR3 {Mouse (Mus muscul	97.31
d1klra_	30	ZFY {Human (Homo sapiens) [TaxId: 9606]}	97.29
d2csha2	44	Zinc finger protein 297b {Human (Homo sapiens) [Ta	97.23
d2adra2	31	ADR1 {Synthetic, based on Saccharomyces cerevisiae	97.03
d1klra_	30	ZFY {Human (Homo sapiens) [TaxId: 9606]}	96.96
d1bboa2	29	Enhancer binding protein {Human (Homo sapiens) [Ta	96.9
d1bboa1	28	Enhancer binding protein {Human (Homo sapiens) [Ta	96.89
d1ubdc2	28	Ying-yang 1 (yy1, zinc finger domain) {Human (Homo	96.81
d2epqa1	32	PATZ1 {Human (Homo sapiens) [TaxId: 9606]}	96.7
d2dmda1	28	Zinc finger protein 64, ZFP68 {Human (Homo sapiens	96.58
d2glia5	29	Five-finger GLI1 {Human (Homo sapiens) [TaxId: 960	96.58
d1bhia_	38	Transactivation domain of cre-bp1/atf-2 {Human (Ho	96.49
d1x5wa1	28	Zinc finger protein 64, ZFP68 {Human (Homo sapiens	96.42
d1x5wa2	29	Zinc finger protein 64, ZFP68 {Human (Homo sapiens	96.36
d2glia2	33	Five-finger GLI1 {Human (Homo sapiens) [TaxId: 960	96.28
d1znfa_	26	XFIN, third domain {Xenopus laevis [TaxId: 8355]}	96.1
d2glia2	33	Five-finger GLI1 {Human (Homo sapiens) [TaxId: 960	96.1
d2dlqa2	28	GLI-Krueppel family member HKR3 {Mouse (Mus muscul	96.07
d2glia4	31	Five-finger GLI1 {Human (Homo sapiens) [TaxId: 960	96.05
d1njqa_	37	SUPERMAN zinc finger domain {Thale cress (Arabidop	95.73
d2csha2	44	Zinc finger protein 297b {Human (Homo sapiens) [Ta	95.65
d2dlqa1	26	GLI-Krueppel family member HKR3 {Mouse (Mus muscul	95.52
d2dlqa4	27	GLI-Krueppel family member HKR3 {Mouse (Mus muscul	95.47
d2adra2	31	ADR1 {Synthetic, based on Saccharomyces cerevisiae	95.34
d2eppa1	53	PATZ1 {Human (Homo sapiens) [TaxId: 9606]}	95.1
d2drpa2	26	Tramtrack protein (two zinc-finger peptide) {Droso	94.93
d1x5wa2	29	Zinc finger protein 64, ZFP68 {Human (Homo sapiens	94.86
d2j7ja1	28	Transcription factor IIIA, TFIIIA {Xenopus laevis	94.44
d1bboa2	29	Enhancer binding protein {Human (Homo sapiens) [Ta	94.38
d2j7ja2	29	Transcription factor IIIA, TFIIIA {Xenopus laevis	94.22
d1tf3a2	30	Transcription factor IIIA, TFIIIA {Xenopus laevis	93.91
d1tf3a1	31	Transcription factor IIIA, TFIIIA {Xenopus laevis	93.59
d1x6ha1	37	Transcriptional repressor CTCF {Human (Homo sapien	93.43
d2dlqa1	26	GLI-Krueppel family member HKR3 {Mouse (Mus muscul	92.95
d2dlqa3	30	GLI-Krueppel family member HKR3 {Mouse (Mus muscul	92.1
d1nnqa2	37	Rubrerythrin, C-terminal domain {Archaeon Pyrococc	91.41
d2dlqa2	28	GLI-Krueppel family member HKR3 {Mouse (Mus muscul	91.38
d1yuza2	36	Nigerythrin, C-terminal domain {Desulfovibrio vulg	91.02
d2ct1a1	28	Transcriptional repressor CTCF {Human (Homo sapien	90.89
d1yuja_	54	GAGA factor {Drosophila melanogaster [TaxId: 7227]	90.79
d1bhia_	38	Transactivation domain of cre-bp1/atf-2 {Human (Ho	90.74
d1zr9a1	67	Zinc finger protein 593, ZNF593 {Human (Homo sapie	90.6
d2ctda2	30	Zinc finger protein 512, ZNF512 {Human (Homo sapie	90.53
d1vd4a_	62	Transcription initiation factor TFIIE-alpha {Human	87.91
d1y0jb1	36	U-shaped transcription factor, different fingers {	87.58
d1ubdc1	28	Ying-yang 1 (yy1, zinc finger domain) {Human (Homo	86.31
d2drpa1	37	Tramtrack protein (two zinc-finger peptide) {Droso	85.05
d1x6fa1	75	Zinc finger protein 462, ZNF462 {Human (Homo sapie	83.84

>d2csha1 g.37.1.1 (A:8-60) Zinc finger protein 297b {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Zinc finger protein 297b
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.70  E-value=2.4e-18  Score=101.91  Aligned_cols=53  Identities=23%  Similarity=0.411  Sum_probs=49.3

Q ss_pred             CcceeccccccccCChhHHHHHHHhhcCCCCCCCCCCCCCCCCCCccCCCCChhhhcccccc
Q 044013           23 GRSYECVFCKRGFTTAQALGGHMNIHRKDRAKNRPPSSSSISDKLTFFPSPSTWDDHQRSVH   84 (153)
Q Consensus        23 ekp~~C~~Cgk~F~~~~~L~~H~r~H~gekp~~C~~c~~~~Cgk~~~F~~~~~L~~H~~~~H   84 (153)
                      ||||.|. ||+.|....+|..|+++|+|++||.|..|++.       |.+.+.|..|++ +|
T Consensus         1 EK~y~C~-Cgk~F~~~~~l~~H~~~Ht~ekpy~C~~C~k~-------F~~~~~L~~H~r-~H   53 (53)
T d2csha1           1 DKLYPCQ-CGKSFTHKSQRDRHMSMHLGLRPYGCGVCGKK-------FKMKHHLVGHMK-IH   53 (53)
T ss_dssp             CCCEECT-TSCEESSHHHHHHHHHHHSCCCSEECTTTSCE-------ESSSHHHHHHHT-TT
T ss_pred             CcCCCCC-CCCeECCHHHhHHHhhccccccCCcCCCcCCE-------ecCHHHHHHHHh-cC
Confidence            6899995 99999999999999999999999999966666       999999999998 76

>d2epsa1 g.37.1.1 (A:408-446) PATZ1 {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: PATZ1
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.47  E-value=1.5e-14  Score=79.68  Aligned_cols=36  Identities=31%  Similarity=0.800  Sum_probs=33.7

Q ss_pred             CCcceeccccccccCChhHHHHHHH-hhcCCCCCCCC
Q 044013           22 TGRSYECVFCKRGFTTAQALGGHMN-IHRKDRAKNRP   57 (153)
Q Consensus        22 gekp~~C~~Cgk~F~~~~~L~~H~r-~H~gekp~~C~   57 (153)
                      .+|||+|.+||++|....+|..|++ +|+++|||+|.
T Consensus         2 ~~Kpy~C~~Cgk~F~~~~~L~~H~r~~Ht~ekpy~C~   38 (39)
T d2epsa1           2 VGKPYICQSCGKGFSRPDHLNGHIKQVHTSERPHKCQ   38 (39)
T ss_dssp             SSCCEECSSSCCEESSHHHHHHHHHHTSCCCCCCCSS
T ss_pred             CCCCccCCCCCCCcCChHHhhccCcCccCCCcCcCCc
Confidence            4799999999999999999999976 89999999997

>d2cota2 g.37.1.1 (A:7-44) Zinc finger and SCAN domain-containing protein 16, ZSCAN16 {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Zinc finger and SCAN domain-containing protein 16, ZSCAN16
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.34  E-value=2.6e-13  Score=74.41  Aligned_cols=36  Identities=22%  Similarity=0.492  Sum_probs=22.2

Q ss_pred             cccccCCCCcceeccccccccCChhHHHHHHHhhcCC
Q 044013           15 DDETDAGTGRSYECVFCKRGFTTAQALGGHMNIHRKD   51 (153)
Q Consensus        15 h~~~~~~gekp~~C~~Cgk~F~~~~~L~~H~r~H~ge   51 (153)
                      |+..+++ +|||.|++|||+|...++|..|+++|+||
T Consensus         3 H~~~Ht~-ekpy~C~~CgK~F~~~s~L~~H~r~HtGE   38 (38)
T d2cota2           3 SEWQQRE-RRRYKCDECGKSFSHSSDLSKHRRTHTGE   38 (38)
T ss_dssp             CCSCCCC-SCSSBCSSSCCBCSCHHHHHHHHTTTCCS
T ss_pred             cCcccCC-CCCEecCCCCceeeCHHHHHHhCccCCCC
Confidence            4555554 66666666666666666666666666654

>d2adra1 g.37.1.1 (A:102-130) ADR1 {Synthetic, based on Saccharomyces cerevisiae sequence}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: ADR1
species: Synthetic, based on Saccharomyces cerevisiae sequence

Probab=99.27  E-value=8.9e-13  Score=67.89  Aligned_cols=29  Identities=31%  Similarity=0.723  Sum_probs=26.4

Q ss_pred             cceeccccccccCChhHHHHHHHhhcCCC
Q 044013           24 RSYECVFCKRGFTTAQALGGHMNIHRKDR   52 (153)
Q Consensus        24 kp~~C~~Cgk~F~~~~~L~~H~r~H~gek   52 (153)
                      |||.|++|+++|...+.|.+|+++|+|||
T Consensus         1 kp~~C~~C~k~F~~~~~L~~H~r~HTgEK   29 (29)
T d2adra1           1 RSFVCEVCTRAFARQEHLKRHYRSHTNEK   29 (29)
T ss_dssp             CCBCCTTTCCCBSCHHHHHHHHHTTTSSC
T ss_pred             CcCCCCCCCCCCCCchHcccccCcccCCC
Confidence            68999999999999999999999999986

>d1x6ea1 g.37.1.1 (A:8-40) Zinc finger protein 24 {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Zinc finger protein 24
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.26  E-value=1.6e-12  Score=68.76  Aligned_cols=30  Identities=27%  Similarity=0.635  Sum_probs=25.4

Q ss_pred             CCcceeccccccccCChhHHHHHHHhhcCC
Q 044013           22 TGRSYECVFCKRGFTTAQALGGHMNIHRKD   51 (153)
Q Consensus        22 gekp~~C~~Cgk~F~~~~~L~~H~r~H~ge   51 (153)
                      |+|||+|.+||++|...+.|..|+++|+||
T Consensus         4 gekpy~C~~Cgk~F~~~~~L~~H~r~HtgE   33 (33)
T d1x6ea1           4 GEKPYGCVECGKAFSRSSILVQHQRVHTGE   33 (33)
T ss_dssp             TCCCEECSSSCCEESSHHHHHHHHHGGGCS
T ss_pred             CCCCeeCCCCCCEeCchHHhHhhccccCCC
Confidence            488888888888888888888888888875

>d1a1ia2 g.37.1.1 (A:132-159) ZIF268 {Mouse (Mus musculus) [TaxId: 10090]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: ZIF268
species: Mouse (Mus musculus) [TaxId: 10090]

Probab=99.24  E-value=1.3e-12  Score=66.55  Aligned_cols=28  Identities=25%  Similarity=0.700  Sum_probs=26.7

Q ss_pred             CcceeccccccccCChhHHHHHHHhhcC
Q 044013           23 GRSYECVFCKRGFTTAQALGGHMNIHRK   50 (153)
Q Consensus        23 ekp~~C~~Cgk~F~~~~~L~~H~r~H~g   50 (153)
                      ||||+|.+|+|+|...++|..|+++|+|
T Consensus         1 EKPy~C~~C~k~F~~~~~L~~H~r~HTG   28 (28)
T d1a1ia2           1 QKPFQCRICMRNFSRSDHLTTHIRTHTG   28 (28)
T ss_dssp             CCCEECTTTCCEESCHHHHHHHHHHHHC
T ss_pred             CcCccCCCCcCEecccccccccCCCccC
Confidence            6899999999999999999999999987

>d2cota2 g.37.1.1 (A:7-44) Zinc finger and SCAN domain-containing protein 16, ZSCAN16 {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Zinc finger and SCAN domain-containing protein 16, ZSCAN16
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.23  E-value=4.3e-13  Score=73.49  Aligned_cols=37  Identities=24%  Similarity=0.294  Sum_probs=33.4

Q ss_pred             HHHHhhcCCCCCCCCCCCCCCCCCCccCCCCChhhhccccccCCC
Q 044013           43 GHMNIHRKDRAKNRPPSSSSISDKLTFFPSPSTWDDHQRSVHTNN   87 (153)
Q Consensus        43 ~H~r~H~gekp~~C~~c~~~~Cgk~~~F~~~~~L~~H~~~~Ht~~   87 (153)
                      +|+++|+++|||.|..|+++       |.+.++|..|++ +||||
T Consensus         2 rH~~~Ht~ekpy~C~~CgK~-------F~~~s~L~~H~r-~HtGE   38 (38)
T d2cota2           2 RSEWQQRERRRYKCDECGKS-------FSHSSDLSKHRR-THTGE   38 (38)
T ss_dssp             CCCSCCCCSCSSBCSSSCCB-------CSCHHHHHHHHT-TTCCS
T ss_pred             ccCcccCCCCCEecCCCCce-------eeCHHHHHHhCc-cCCCC
Confidence            48899999999999955555       999999999999 99996

>d1sp1a_ g.37.1.1 (A:) Transcription factor sp1 {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Transcription factor sp1
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.22  E-value=2.4e-12  Score=66.14  Aligned_cols=29  Identities=21%  Similarity=0.658  Sum_probs=25.0

Q ss_pred             cceeccccccccCChhHHHHHHHhhcCCC
Q 044013           24 RSYECVFCKRGFTTAQALGGHMNIHRKDR   52 (153)
Q Consensus        24 kp~~C~~Cgk~F~~~~~L~~H~r~H~gek   52 (153)
                      |||.|.+|+|+|...+.|..|+++|+|+|
T Consensus         1 Kpy~C~~C~k~F~~~s~L~~H~r~HtgeK   29 (29)
T d1sp1a_           1 KKFACPECPKRFMRSDHLSKHIKTHQNKK   29 (29)
T ss_dssp             CCSCCTTTTCCCSCSHHHHHHHHGGGCCC
T ss_pred             CCEECCcCCCeecchHHhhhhcCccCCcC
Confidence            58888888888888888888888888875

>d1srka_ g.37.1.1 (A:) Zinc finger protein ZFPM1 (FOG-1) {Mouse (Mus musculus) [TaxId: 10090]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Zinc finger protein ZFPM1 (FOG-1)
species: Mouse (Mus musculus) [TaxId: 10090]

Probab=99.19  E-value=6.1e-12  Score=67.38  Aligned_cols=31  Identities=26%  Similarity=0.590  Sum_probs=27.7

Q ss_pred             CCCcceeccccccccCChhHHHHHHHhhcCC
Q 044013           21 GTGRSYECVFCKRGFTTAQALGGHMNIHRKD   51 (153)
Q Consensus        21 ~gekp~~C~~Cgk~F~~~~~L~~H~r~H~ge   51 (153)
                      .|||||+|.+|+|.|....+|..|+++|+..
T Consensus         3 TGekPy~C~~C~k~F~~~~~L~~H~r~Ht~~   33 (35)
T d1srka_           3 SGKRPFVCRICLSAFTTKANCARHLKVHTDT   33 (35)
T ss_dssp             SCCSCEECSSSCCEESSHHHHHHHHGGGTSC
T ss_pred             CCCccccCCCCCCcccChHHHHHHccccCCc
Confidence            4699999999999999999999999999865

>d2dlka2 g.37.1.1 (A:38-73) Zinc finger protein 692, ZNF692 {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Zinc finger protein 692, ZNF692
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.19  E-value=5.6e-12  Score=67.98  Aligned_cols=33  Identities=27%  Similarity=0.521  Sum_probs=31.0

Q ss_pred             ceeccc--cccccCChhHHHHHHHhhcCCCCCCCC
Q 044013           25 SYECVF--CKRGFTTAQALGGHMNIHRKDRAKNRP   57 (153)
Q Consensus        25 p~~C~~--Cgk~F~~~~~L~~H~r~H~gekp~~C~   57 (153)
                      .|.|++  |+++|.....|++|+++|+|+|||.|+
T Consensus         1 tf~C~~~~C~k~F~~~~~L~~H~r~Htgekpy~C~   35 (36)
T d2dlka2           1 SFSCPEPACGKSFNFKKHLKEHMKLHSDTRDYICE   35 (36)
T ss_dssp             CEECSCTTTCCEESSHHHHHHHHHHHHTSCCCSCC
T ss_pred             CeECCCCCCCCeeCChhHhccccCeeCCCCCEeCC
Confidence            378987  999999999999999999999999997

>d1p7aa_ g.37.1.1 (A:) Kruppel-like factor 3, Bklf {Mouse (Mus musculus) [TaxId: 10090]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Kruppel-like factor 3, Bklf
species: Mouse (Mus musculus) [TaxId: 10090]

Probab=99.15  E-value=1.1e-11  Score=67.39  Aligned_cols=34  Identities=15%  Similarity=0.137  Sum_probs=17.2

Q ss_pred             HHHhhcCCCCCCCCCCCCCCCCCCccCCCCChhhhccccccC
Q 044013           44 HMNIHRKDRAKNRPPSSSSISDKLTFFPSPSTWDDHQRSVHT   85 (153)
Q Consensus        44 H~r~H~gekp~~C~~c~~~~Cgk~~~F~~~~~L~~H~~~~Ht   85 (153)
                      |.|+|+|||||+|+.|+++       |.+.++|..|++ +|.
T Consensus         2 h~R~HTgeKPy~C~~C~k~-------F~~~~~L~~H~r-~H~   35 (37)
T d1p7aa_           2 STRGSTGIKPFQCPDCDRS-------FSRSDHLALHRK-RHM   35 (37)
T ss_dssp             CSSTTCCSSSBCCTTTCCC-------BSSHHHHHHHHG-GGT
T ss_pred             CCCccCCccCeEeCCCCCE-------ecCHHHHHHHHh-cCc
Confidence            4455555555555533333       555555555555 544

>d1p7aa_ g.37.1.1 (A:) Kruppel-like factor 3, Bklf {Mouse (Mus musculus) [TaxId: 10090]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Kruppel-like factor 3, Bklf
species: Mouse (Mus musculus) [TaxId: 10090]

Probab=99.14  E-value=2.7e-12  Score=69.82  Aligned_cols=35  Identities=23%  Similarity=0.474  Sum_probs=31.8

Q ss_pred             cccccCCCCcceeccccccccCChhHHHHHHHhhcC
Q 044013           15 DDETDAGTGRSYECVFCKRGFTTAQALGGHMNIHRK   50 (153)
Q Consensus        15 h~~~~~~gekp~~C~~Cgk~F~~~~~L~~H~r~H~g   50 (153)
                      |.+.+++ ||||+|.+|+++|...++|..|+++|.+
T Consensus         2 h~R~HTg-eKPy~C~~C~k~F~~~~~L~~H~r~H~~   36 (37)
T d1p7aa_           2 STRGSTG-IKPFQCPDCDRSFSRSDHLALHRKRHML   36 (37)
T ss_dssp             CSSTTCC-SSSBCCTTTCCCBSSHHHHHHHHGGGTC
T ss_pred             CCCccCC-ccCeEeCCCCCEecCHHHHHHHHhcCcC
Confidence            5667776 9999999999999999999999999975

>d1x6ea1 g.37.1.1 (A:8-40) Zinc finger protein 24 {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Zinc finger protein 24
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.14  E-value=1.8e-12  Score=68.55  Aligned_cols=33  Identities=30%  Similarity=0.435  Sum_probs=30.1

Q ss_pred             hhcCCCCCCCCCCCCCCCCCCccCCCCChhhhccccccCCC
Q 044013           47 IHRKDRAKNRPPSSSSISDKLTFFPSPSTWDDHQRSVHTNN   87 (153)
Q Consensus        47 ~H~gekp~~C~~c~~~~Cgk~~~F~~~~~L~~H~~~~Ht~~   87 (153)
                      +|+|+|||+|..|+++       |.+.++|..|++ +|+||
T Consensus         1 IHTgekpy~C~~Cgk~-------F~~~~~L~~H~r-~HtgE   33 (33)
T d1x6ea1           1 IHSGEKPYGCVECGKA-------FSRSSILVQHQR-VHTGE   33 (33)
T ss_dssp             TTTTCCCEECSSSCCE-------ESSHHHHHHHHH-GGGCS
T ss_pred             CcCCCCCeeCCCCCCE-------eCchHHhHhhcc-ccCCC
Confidence            6999999999966666       999999999999 99986

>d1x6ha2 g.37.1.1 (A:8-43) Transcriptional repressor CTCF {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Transcriptional repressor CTCF
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.12  E-value=1.8e-11  Score=66.05  Aligned_cols=30  Identities=23%  Similarity=0.509  Sum_probs=23.0

Q ss_pred             CCcceeccccccccCChhHHHHHHHhhcCC
Q 044013           22 TGRSYECVFCKRGFTTAQALGGHMNIHRKD   51 (153)
Q Consensus        22 gekp~~C~~Cgk~F~~~~~L~~H~r~H~ge   51 (153)
                      |||||+|.+|+++|...+.|..|+++|+++
T Consensus         5 gekPy~C~~C~k~F~~~~~L~~H~r~H~~~   34 (36)
T d1x6ha2           5 GEKPYACSHCDKTFRQKQLLDMHFKRYHDP   34 (36)
T ss_dssp             CCCCEECSSSSCEESSHHHHHHHHHHTTCS
T ss_pred             CCCCEECCCCCCCcCCHhHHHHhCcccCCC
Confidence            377888888888888888888888877754

>d1x6ea2 g.37.1.1 (A:41-66) Zinc finger protein 24 {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Zinc finger protein 24
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.07  E-value=2.3e-11  Score=60.54  Aligned_cols=26  Identities=31%  Similarity=0.756  Sum_probs=24.8

Q ss_pred             cceeccccccccCChhHHHHHHHhhc
Q 044013           24 RSYECVFCKRGFTTAQALGGHMNIHR   49 (153)
Q Consensus        24 kp~~C~~Cgk~F~~~~~L~~H~r~H~   49 (153)
                      |||+|.+|||+|...+.|..|+|+||
T Consensus         1 KPy~C~eCgK~F~~~s~L~~HqriHT   26 (26)
T d1x6ea2           1 KPYKCLECGKAFSQNSGLINHQRIHT   26 (26)
T ss_dssp             CCEECSSSCCEESSHHHHHHHHHHHH
T ss_pred             CCccCCCCcCeeccCcccccCccCCC
Confidence            69999999999999999999999996

>d2csha1 g.37.1.1 (A:8-60) Zinc finger protein 297b {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Zinc finger protein 297b
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.07  E-value=3.1e-12  Score=74.92  Aligned_cols=45  Identities=18%  Similarity=0.243  Sum_probs=40.9

Q ss_pred             CCCCCCCCCCCCCCCCCccCCCCChhhhccccccCCCCCCCCCCCCccccccCCc
Q 044013           51 DRAKNRPPSSSSISDKLTFFPSPSTWDDHQRSVHTNNNNHSNYDSYGQNYHQHLN  105 (153)
Q Consensus        51 ekp~~C~~c~~~~Cgk~~~F~~~~~L~~H~~~~Ht~~kp~~~~~~~~~~f~~~~~  105 (153)
                      ||||.|. |++.       |....+|..|++ +|++++|| .|..|+++|.+...
T Consensus         1 EK~y~C~-Cgk~-------F~~~~~l~~H~~-~Ht~ekpy-~C~~C~k~F~~~~~   45 (53)
T d2csha1           1 DKLYPCQ-CGKS-------FTHKSQRDRHMS-MHLGLRPY-GCGVCGKKFKMKHH   45 (53)
T ss_dssp             CCCEECT-TSCE-------ESSHHHHHHHHH-HHSCCCSE-ECTTTSCEESSSHH
T ss_pred             CcCCCCC-CCCe-------ECCHHHhHHHhh-ccccccCC-cCCCcCCEecCHHH
Confidence            6899994 8888       999999999999 99999999 89999999976555

>d2epsa1 g.37.1.1 (A:408-446) PATZ1 {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: PATZ1
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.07  E-value=9.5e-12  Score=68.21  Aligned_cols=37  Identities=19%  Similarity=0.356  Sum_probs=31.3

Q ss_pred             CCCCCCCCCCCCCCCCCCccCCCCChhhhccccccCCCCCCCCCC
Q 044013           50 KDRAKNRPPSSSSISDKLTFFPSPSTWDDHQRSVHTNNNNHSNYD   94 (153)
Q Consensus        50 gekp~~C~~c~~~~Cgk~~~F~~~~~L~~H~~~~Ht~~kp~~~~~   94 (153)
                      -+|||+|..|+++       |.+.++|+.|++.+|+++||| .|.
T Consensus         2 ~~Kpy~C~~Cgk~-------F~~~~~L~~H~r~~Ht~ekpy-~C~   38 (39)
T d2epsa1           2 VGKPYICQSCGKG-------FSRPDHLNGHIKQVHTSERPH-KCQ   38 (39)
T ss_dssp             SSCCEECSSSCCE-------ESSHHHHHHHHHHTSCCCCCC-CSS
T ss_pred             CCCCccCCCCCCC-------cCChHHhhccCcCccCCCcCc-CCc
Confidence            4799999966655       999999999985489999999 554

>d1x6ha2 g.37.1.1 (A:8-43) Transcriptional repressor CTCF {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Transcriptional repressor CTCF
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.06  E-value=5.9e-12  Score=68.00  Aligned_cols=34  Identities=12%  Similarity=0.154  Sum_probs=30.4

Q ss_pred             HhhcCCCCCCCCCCCCCCCCCCccCCCCChhhhccccccCCC
Q 044013           46 NIHRKDRAKNRPPSSSSISDKLTFFPSPSTWDDHQRSVHTNN   87 (153)
Q Consensus        46 r~H~gekp~~C~~c~~~~Cgk~~~F~~~~~L~~H~~~~Ht~~   87 (153)
                      |+|+|+|||+|..|+++       |.+.++|..|++ +|+++
T Consensus         1 R~HTgekPy~C~~C~k~-------F~~~~~L~~H~r-~H~~~   34 (36)
T d1x6ha2           1 RTHTGEKPYACSHCDKT-------FRQKQLLDMHFK-RYHDP   34 (36)
T ss_dssp             TTCCCCCCEECSSSSCE-------ESSHHHHHHHHH-HTTCS
T ss_pred             CCCCCCCCEECCCCCCC-------cCCHhHHHHhCc-ccCCC
Confidence            68999999999966666       999999999999 99875

>d1ncsa_ g.37.1.1 (A:) SWI5 zinc-finger domains {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: SWI5 zinc-finger domains
species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]

Probab=99.05  E-value=3.2e-11  Score=68.76  Aligned_cols=39  Identities=23%  Similarity=0.619  Sum_probs=28.4

Q ss_pred             CCCcccccCCCCcceeccc--cccccCChhHHHHHHHhhcCCC
Q 044013           12 SSSDDETDAGTGRSYECVF--CKRGFTTAQALGGHMNIHRKDR   52 (153)
Q Consensus        12 ~~~h~~~~~~gekp~~C~~--Cgk~F~~~~~L~~H~r~H~gek   52 (153)
                      +..|+. ++ +++||.|.+  |++.|...++|..|+++|+|+|
T Consensus         7 l~~h~~-h~-gekpy~C~~~~C~k~F~~~~~L~~H~r~Htgek   47 (47)
T d1ncsa_           7 IDKYVK-EM-PDKTFECLFPGCTKTFKRRYNIRSHIQTHLEDR   47 (47)
T ss_dssp             GGGSCE-EE-TTTEEECCCTTCCCEECSSSSHHHHHHHHTTTC
T ss_pred             hcchhh-cc-CCCCeECCcCCCCccccCchHHHhhcccccCCC
Confidence            444553 33 478888876  8888888888888888888875

>d1ubdc3 g.37.1.1 (C:351-380) Ying-yang 1 (yy1, zinc finger domain) {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Ying-yang 1 (yy1, zinc finger domain)
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.03  E-value=5.1e-11  Score=61.53  Aligned_cols=28  Identities=32%  Similarity=0.806  Sum_probs=26.3

Q ss_pred             cceeccc--cccccCChhHHHHHHHhhcCC
Q 044013           24 RSYECVF--CKRGFTTAQALGGHMNIHRKD   51 (153)
Q Consensus        24 kp~~C~~--Cgk~F~~~~~L~~H~r~H~ge   51 (153)
                      |||.|++  |+|+|...++|++|+|+|+||
T Consensus         1 kp~~C~~~gCgk~F~~~~~L~~H~r~HTGE   30 (30)
T d1ubdc3           1 KPFQCTFEGCGKRFSLDFNLRTHVRIHTGD   30 (30)
T ss_dssp             CCEECCSTTCCCEESCHHHHHHHHHHHHCC
T ss_pred             CCccCCCCCCCceECcHHHcCccccccCCC
Confidence            6999988  999999999999999999986

>d2glia3 g.37.1.1 (A:168-197) Five-finger GLI1 {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Five-finger GLI1
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.03  E-value=5.6e-11  Score=61.31  Aligned_cols=28  Identities=21%  Similarity=0.726  Sum_probs=24.7

Q ss_pred             cceeccc--cccccCChhHHHHHHHhhcCC
Q 044013           24 RSYECVF--CKRGFTTAQALGGHMNIHRKD   51 (153)
Q Consensus        24 kp~~C~~--Cgk~F~~~~~L~~H~r~H~ge   51 (153)
                      |||.|++  |+|+|...+.|+.|+++|+||
T Consensus         1 kp~~C~~~gCgk~F~~~~~L~~H~r~HtGE   30 (30)
T d2glia3           1 KPHKCTFEGCRKSYSRLENLKTHLRSHTGE   30 (30)
T ss_dssp             CCCCCCSTTCCCCCSSHHHHHHHHHHTTTC
T ss_pred             CCeeCCCCCCCceECChhHhhhhcCcCcCC
Confidence            6899988  999999999999999999886

>d1sp2a_ g.37.1.1 (A:) Transcription factor sp1 {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Transcription factor sp1
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.00  E-value=7.9e-11  Score=61.26  Aligned_cols=29  Identities=28%  Similarity=0.743  Sum_probs=24.1

Q ss_pred             cceecc--ccccccCChhHHHHHHHhhcCCC
Q 044013           24 RSYECV--FCKRGFTTAQALGGHMNIHRKDR   52 (153)
Q Consensus        24 kp~~C~--~Cgk~F~~~~~L~~H~r~H~gek   52 (153)
                      |||.|+  .|+|+|...++|.+|+++|+|+|
T Consensus         1 kpf~C~~~~C~k~F~~~~~L~~H~r~HtgeK   31 (31)
T d1sp2a_           1 RPFMCTWSYCGKRFTRSDELQRHKRTHTGEK   31 (31)
T ss_dssp             CCCBCCSTTCCCBCSSHHHHHHHHTTTSCCC
T ss_pred             CcCCCcCCCCCcCcCChhHhhhhcCcccccC
Confidence            588886  48888888888888888888875

>d2ct1a2 g.37.1.1 (A:8-43) Transcriptional repressor CTCF {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Transcriptional repressor CTCF
species: Human (Homo sapiens) [TaxId: 9606]

Probab=98.95  E-value=2.3e-11  Score=65.60  Aligned_cols=26  Identities=27%  Similarity=0.597  Sum_probs=18.7

Q ss_pred             CCcceeccccccccCChhHHHHHHHh
Q 044013           22 TGRSYECVFCKRGFTTAQALGGHMNI   47 (153)
Q Consensus        22 gekp~~C~~Cgk~F~~~~~L~~H~r~   47 (153)
                      |||||+|++|++.|....+|+.|++.
T Consensus         5 gekP~~C~~C~k~F~~~~~L~~H~~~   30 (36)
T d2ct1a2           5 GEKPYECYICHARFTQSGTMKMHILQ   30 (36)
T ss_dssp             CCCSEECTTTCCEESCHHHHHHHHHH
T ss_pred             CCCCEeCCCCcccccchHHHHHHccc
Confidence            37777777777777777777777643

>d1srka_ g.37.1.1 (A:) Zinc finger protein ZFPM1 (FOG-1) {Mouse (Mus musculus) [TaxId: 10090]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Zinc finger protein ZFPM1 (FOG-1)
species: Mouse (Mus musculus) [TaxId: 10090]

Probab=98.94  E-value=4.1e-11  Score=64.04  Aligned_cols=32  Identities=22%  Similarity=0.250  Sum_probs=28.7

Q ss_pred             hcCCCCCCCCCCCCCCCCCCccCCCCChhhhccccccCCC
Q 044013           48 HRKDRAKNRPPSSSSISDKLTFFPSPSTWDDHQRSVHTNN   87 (153)
Q Consensus        48 H~gekp~~C~~c~~~~Cgk~~~F~~~~~L~~H~~~~Ht~~   87 (153)
                      |+|+|||.|+.|++.       |.+.++|+.|++ +|+..
T Consensus         2 ~TGekPy~C~~C~k~-------F~~~~~L~~H~r-~Ht~~   33 (35)
T d1srka_           2 SSGKRPFVCRICLSA-------FTTKANCARHLK-VHTDT   33 (35)
T ss_dssp             CSCCSCEECSSSCCE-------ESSHHHHHHHHG-GGTSC
T ss_pred             CCCCccccCCCCCCc-------ccChHHHHHHcc-ccCCc
Confidence            799999999966666       999999999999 99875

>d2ct1a2 g.37.1.1 (A:8-43) Transcriptional repressor CTCF {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Transcriptional repressor CTCF
species: Human (Homo sapiens) [TaxId: 9606]

Probab=98.93  E-value=3e-10  Score=61.05  Aligned_cols=35  Identities=20%  Similarity=0.216  Sum_probs=29.1

Q ss_pred             HhhcCCCCCCCCCCCCCCCCCCccCCCCChhhhccccccCCC
Q 044013           46 NIHRKDRAKNRPPSSSSISDKLTFFPSPSTWDDHQRSVHTNN   87 (153)
Q Consensus        46 r~H~gekp~~C~~c~~~~Cgk~~~F~~~~~L~~H~~~~Ht~~   87 (153)
                      |+|+|||||.|+.|+++       |++.++|+.|++..|+.+
T Consensus         1 R~HTgekP~~C~~C~k~-------F~~~~~L~~H~~~~H~~~   35 (36)
T d2ct1a2           1 RTHSGEKPYECYICHAR-------FTQSGTMKMHILQKHTEN   35 (36)
T ss_dssp             CCCSCCCSEECTTTCCE-------ESCHHHHHHHHHHHSSSS
T ss_pred             CccCCCCCEeCCCCccc-------ccchHHHHHHcccccCCC
Confidence            58999999999966666       999999999986366643

>d2adra1 g.37.1.1 (A:102-130) ADR1 {Synthetic, based on Saccharomyces cerevisiae sequence}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: ADR1
species: Synthetic, based on Saccharomyces cerevisiae sequence

Probab=98.87  E-value=2.1e-10  Score=58.71  Aligned_cols=29  Identities=24%  Similarity=0.307  Sum_probs=26.0

Q ss_pred             CCCCCCCCCCCCCCCCccCCCCChhhhccccccCCCC
Q 044013           52 RAKNRPPSSSSISDKLTFFPSPSTWDDHQRSVHTNNN   88 (153)
Q Consensus        52 kp~~C~~c~~~~Cgk~~~F~~~~~L~~H~~~~Ht~~k   88 (153)
                      |||.|+.|+++       |.+.+.|..|++ +|||+|
T Consensus         1 kp~~C~~C~k~-------F~~~~~L~~H~r-~HTgEK   29 (29)
T d2adra1           1 RSFVCEVCTRA-------FARQEHLKRHYR-SHTNEK   29 (29)
T ss_dssp             CCBCCTTTCCC-------BSCHHHHHHHHH-TTTSSC
T ss_pred             CcCCCCCCCCC-------CCCchHcccccC-cccCCC
Confidence            69999966666       999999999999 999986

>d1ncsa_ g.37.1.1 (A:) SWI5 zinc-finger domains {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: SWI5 zinc-finger domains
species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]

Probab=98.87  E-value=3.6e-11  Score=68.57  Aligned_cols=41  Identities=10%  Similarity=0.114  Sum_probs=34.7

Q ss_pred             hHHHHHHHhhcCCCCCCCCC--CCCCCCCCCccCCCCChhhhccccccCCCC
Q 044013           39 QALGGHMNIHRKDRAKNRPP--SSSSISDKLTFFPSPSTWDDHQRSVHTNNN   88 (153)
Q Consensus        39 ~~L~~H~r~H~gekp~~C~~--c~~~~Cgk~~~F~~~~~L~~H~~~~Ht~~k   88 (153)
                      ..|..|+ .|++++||.|.+  |++.       |.+.++|..|++ +|+|+|
T Consensus         5 ~~l~~h~-~h~gekpy~C~~~~C~k~-------F~~~~~L~~H~r-~Htgek   47 (47)
T d1ncsa_           5 GSIDKYV-KEMPDKTFECLFPGCTKT-------FKRRYNIRSHIQ-THLEDR   47 (47)
T ss_dssp             SSGGGSC-EEETTTEEECCCTTCCCE-------ECSSSSHHHHHH-HHTTTC
T ss_pred             chhcchh-hccCCCCeECCcCCCCcc-------ccCchHHHhhcc-cccCCC
Confidence            3466677 599999999975  6655       999999999999 999986

>d1sp1a_ g.37.1.1 (A:) Transcription factor sp1 {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Transcription factor sp1
species: Human (Homo sapiens) [TaxId: 9606]

Probab=98.87  E-value=3.5e-10  Score=57.84  Aligned_cols=29  Identities=17%  Similarity=0.318  Sum_probs=26.1

Q ss_pred             CCCCCCCCCCCCCCCCccCCCCChhhhccccccCCCC
Q 044013           52 RAKNRPPSSSSISDKLTFFPSPSTWDDHQRSVHTNNN   88 (153)
Q Consensus        52 kp~~C~~c~~~~Cgk~~~F~~~~~L~~H~~~~Ht~~k   88 (153)
                      |||.|+.|+++       |.+.++|..|++ +|+|+|
T Consensus         1 Kpy~C~~C~k~-------F~~~s~L~~H~r-~HtgeK   29 (29)
T d1sp1a_           1 KKFACPECPKR-------FMRSDHLSKHIK-THQNKK   29 (29)
T ss_dssp             CCSCCTTTTCC-------CSCSHHHHHHHH-GGGCCC
T ss_pred             CCEECCcCCCe-------ecchHHhhhhcC-ccCCcC
Confidence            79999966666       999999999999 999986

>d1a1ia1 g.37.1.1 (A:103-131) ZIF268 {Mouse (Mus musculus) [TaxId: 10090]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: ZIF268
species: Mouse (Mus musculus) [TaxId: 10090]

Probab=98.82  E-value=7e-10  Score=56.61  Aligned_cols=27  Identities=37%  Similarity=0.823  Sum_probs=25.0

Q ss_pred             cceeccc--cccccCChhHHHHHHHhhcC
Q 044013           24 RSYECVF--CKRGFTTAQALGGHMNIHRK   50 (153)
Q Consensus        24 kp~~C~~--Cgk~F~~~~~L~~H~r~H~g   50 (153)
                      |||.|++  |+|+|.+.+.|.+|+++|+|
T Consensus         1 Kp~~C~~~gC~k~F~~~~~L~~H~r~HtG   29 (29)
T d1a1ia1           1 RPYACPVESCDRRFSRSADLTRHIRIHTG   29 (29)
T ss_dssp             CCEECCSTTCCCEESSHHHHHHHTHHHHT
T ss_pred             CCeECCCCCCCcEECchhHhhhhcCccCC
Confidence            6999988  99999999999999999986

>d1zfda_ g.37.1.1 (A:) SWI5 zinc-finger domains {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: SWI5 zinc-finger domains
species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]

Probab=98.76  E-value=2.1e-09  Score=56.02  Aligned_cols=28  Identities=29%  Similarity=0.656  Sum_probs=23.1

Q ss_pred             Ccceeccc--cccccCChhHHHHHHHhhcC
Q 044013           23 GRSYECVF--CKRGFTTAQALGGHMNIHRK   50 (153)
Q Consensus        23 ekp~~C~~--Cgk~F~~~~~L~~H~r~H~g   50 (153)
                      ||||.|.+  |+|+|+...+|.+|+++|+.
T Consensus         1 ErP~~C~~pgC~k~F~r~~~L~~H~r~Ht~   30 (32)
T d1zfda_           1 DRPYSCDHPGCDKAFVRNHDLIRHKKSHQE   30 (32)
T ss_dssp             CCSBCCCCTTCCCCBSSSHHHHHHHGGGTC
T ss_pred             CcCeECcCCCCCCeeCCHHHHHHHhhhccC
Confidence            57888887  88888888888888888875

>d1a1ia2 g.37.1.1 (A:132-159) ZIF268 {Mouse (Mus musculus) [TaxId: 10090]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: ZIF268
species: Mouse (Mus musculus) [TaxId: 10090]

Probab=98.74  E-value=2.2e-10  Score=58.13  Aligned_cols=28  Identities=18%  Similarity=0.238  Sum_probs=25.1

Q ss_pred             CCCCCCCCCCCCCCCCCccCCCCChhhhccccccCC
Q 044013           51 DRAKNRPPSSSSISDKLTFFPSPSTWDDHQRSVHTN   86 (153)
Q Consensus        51 ekp~~C~~c~~~~Cgk~~~F~~~~~L~~H~~~~Ht~   86 (153)
                      ||||+|+.|++.       |.+.++|..|++ +|||
T Consensus         1 EKPy~C~~C~k~-------F~~~~~L~~H~r-~HTG   28 (28)
T d1a1ia2           1 QKPFQCRICMRN-------FSRSDHLTTHIR-THTG   28 (28)
T ss_dssp             CCCEECTTTCCE-------ESCHHHHHHHHH-HHHC
T ss_pred             CcCccCCCCcCE-------ecccccccccCC-CccC
Confidence            799999966666       999999999999 9987

>d1ubdc4 g.37.1.1 (C:381-408) Ying-yang 1 (yy1, zinc finger domain) {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Ying-yang 1 (yy1, zinc finger domain)
species: Human (Homo sapiens) [TaxId: 9606]

Probab=98.70  E-value=2.1e-09  Score=54.30  Aligned_cols=26  Identities=35%  Similarity=0.815  Sum_probs=18.3

Q ss_pred             cceeccc--cccccCChhHHHHHHHhhc
Q 044013           24 RSYECVF--CKRGFTTAQALGGHMNIHR   49 (153)
Q Consensus        24 kp~~C~~--Cgk~F~~~~~L~~H~r~H~   49 (153)
                      |||.|++  |+|+|...++|++|+++|+
T Consensus         1 rPf~C~~~gC~K~F~~~~~L~~H~r~HT   28 (28)
T d1ubdc4           1 RPYVCPFDGCNKKFAQSTNLKSHILTHA   28 (28)
T ss_dssp             CCCCCCSTTCCCCCSSTTTTHHHHHHHC
T ss_pred             CCcCCCCCCcCCcCCCHHHHHHHHhhcc
Confidence            4677766  7777777777777777765

>d2dmda2 g.37.1.1 (A:8-33) Zinc finger protein 64, ZFP68 {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Zinc finger protein 64, ZFP68
species: Human (Homo sapiens) [TaxId: 9606]

Probab=98.61  E-value=8.3e-09  Score=49.18  Aligned_cols=26  Identities=27%  Similarity=0.572  Sum_probs=23.0

Q ss_pred             ceeccccccccCChhHHHHHHHhhcC
Q 044013           25 SYECVFCKRGFTTAQALGGHMNIHRK   50 (153)
Q Consensus        25 p~~C~~Cgk~F~~~~~L~~H~r~H~g   50 (153)
                      |++|++|+|.|+.+..|+.|+|.|+|
T Consensus         1 phkc~~c~kcfsrkdklk~hmr~htg   26 (26)
T d2dmda2           1 PHKCEVCGKCFSRKDKLKTHMRCHTG   26 (26)
T ss_dssp             CCCBTTTTBCCCCHHHHHHHGGGCCC
T ss_pred             CCccchhhhHhcchhHHHHHhhccCC
Confidence            67899999999999999999998886

>d2glia3 g.37.1.1 (A:168-197) Five-finger GLI1 {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Five-finger GLI1
species: Human (Homo sapiens) [TaxId: 9606]

Probab=98.57  E-value=7.1e-09  Score=53.18  Aligned_cols=30  Identities=17%  Similarity=0.185  Sum_probs=24.6

Q ss_pred             CCCCCCCCCCCCCCCCccCCCCChhhhccccccCCC
Q 044013           52 RAKNRPPSSSSISDKLTFFPSPSTWDDHQRSVHTNN   87 (153)
Q Consensus        52 kp~~C~~c~~~~Cgk~~~F~~~~~L~~H~~~~Ht~~   87 (153)
                      |||.|++-   .|+|+  |.+.++|+.|++ +|||+
T Consensus         1 kp~~C~~~---gCgk~--F~~~~~L~~H~r-~HtGE   30 (30)
T d2glia3           1 KPHKCTFE---GCRKS--YSRLENLKTHLR-SHTGE   30 (30)
T ss_dssp             CCCCCCST---TCCCC--CSSHHHHHHHHH-HTTTC
T ss_pred             CCeeCCCC---CCCce--ECChhHhhhhcC-cCcCC
Confidence            79999861   24444  999999999999 99986

>d1sp2a_ g.37.1.1 (A:) Transcription factor sp1 {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Transcription factor sp1
species: Human (Homo sapiens) [TaxId: 9606]

Probab=98.55  E-value=9.3e-09  Score=53.18  Aligned_cols=31  Identities=26%  Similarity=0.276  Sum_probs=25.5

Q ss_pred             CCCCCCCCCCCCCCCCccCCCCChhhhccccccCCCC
Q 044013           52 RAKNRPPSSSSISDKLTFFPSPSTWDDHQRSVHTNNN   88 (153)
Q Consensus        52 kp~~C~~c~~~~Cgk~~~F~~~~~L~~H~~~~Ht~~k   88 (153)
                      |||.|++-   .|+|.  |.+.++|+.|++ +|+|+|
T Consensus         1 kpf~C~~~---~C~k~--F~~~~~L~~H~r-~HtgeK   31 (31)
T d1sp2a_           1 RPFMCTWS---YCGKR--FTRSDELQRHKR-THTGEK   31 (31)
T ss_dssp             CCCBCCST---TCCCB--CSSHHHHHHHHT-TTSCCC
T ss_pred             CcCCCcCC---CCCcC--cCChhHhhhhcC-cccccC
Confidence            69999631   45555  999999999999 999986

>d2epra1 g.37.1.1 (A:350-384) PATZ1 {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: PATZ1
species: Human (Homo sapiens) [TaxId: 9606]

Probab=98.51  E-value=3.8e-08  Score=50.12  Aligned_cols=33  Identities=18%  Similarity=0.373  Sum_probs=29.8

Q ss_pred             CcceeccccccccCChhHHHHHHHhhcCCCCCC
Q 044013           23 GRSYECVFCKRGFTTAQALGGHMNIHRKDRAKN   55 (153)
Q Consensus        23 ekp~~C~~Cgk~F~~~~~L~~H~r~H~gekp~~   55 (153)
                      .+...|.+|||.|.....|.+|...|++||||.
T Consensus         3 rk~~~ce~cgk~frdvyhlnrhklshs~ekpys   35 (35)
T d2epra1           3 RKQVACEICGKIFRDVYHLNRHKLSHSGEKPYS   35 (35)
T ss_dssp             CCSEEETTTTEEESSHHHHHHHGGGSCSCCCCC
T ss_pred             chhhhHHHHHHHHHHHHHHHhhhcccCCCCCCC
Confidence            456789999999999999999999999999984

>d1a1ia3 g.37.1.1 (A:160-187) ZIF268 {Mouse (Mus musculus) [TaxId: 10090]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: ZIF268
species: Mouse (Mus musculus) [TaxId: 10090]

Probab=98.51  E-value=3e-08  Score=48.61  Aligned_cols=27  Identities=26%  Similarity=0.619  Sum_probs=25.0

Q ss_pred             CcceeccccccccCChhHHHHHHHhhc
Q 044013           23 GRSYECVFCKRGFTTAQALGGHMNIHR   49 (153)
Q Consensus        23 ekp~~C~~Cgk~F~~~~~L~~H~r~H~   49 (153)
                      ||||.|++||+.|......++|.++|.
T Consensus         1 EkPf~C~~CgrkFArsderkRH~kiH~   27 (28)
T d1a1ia3           1 EKPFACDICGRKFARSDERKRHTKIHL   27 (28)
T ss_dssp             CCCEECTTTCCEESSHHHHHHHHGGGC
T ss_pred             CCCcccchhhhhhhcchhhhhhhhhcc
Confidence            689999999999999999999999985

>d2dlka2 g.37.1.1 (A:38-73) Zinc finger protein 692, ZNF692 {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Zinc finger protein 692, ZNF692
species: Human (Homo sapiens) [TaxId: 9606]

Probab=98.44  E-value=6.4e-09  Score=55.64  Aligned_cols=34  Identities=15%  Similarity=0.274  Sum_probs=27.1

Q ss_pred             CCCCCCCCCCCCCCccCCCCChhhhccccccCCCCCCCCCC
Q 044013           54 KNRPPSSSSISDKLTFFPSPSTWDDHQRSVHTNNNNHSNYD   94 (153)
Q Consensus        54 ~~C~~c~~~~Cgk~~~F~~~~~L~~H~~~~Ht~~kp~~~~~   94 (153)
                      |.|++   ..|+|+  |.+...|+.|++ +|+|++|| .|.
T Consensus         2 f~C~~---~~C~k~--F~~~~~L~~H~r-~Htgekpy-~C~   35 (36)
T d2dlka2           2 FSCPE---PACGKS--FNFKKHLKEHMK-LHSDTRDY-ICE   35 (36)
T ss_dssp             EECSC---TTTCCE--ESSHHHHHHHHH-HHHTSCCC-SCC
T ss_pred             eECCC---CCCCCe--eCChhHhccccC-eeCCCCCE-eCC
Confidence            45653   246666  999999999999 99999999 554

>d1ubdc3 g.37.1.1 (C:351-380) Ying-yang 1 (yy1, zinc finger domain) {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Ying-yang 1 (yy1, zinc finger domain)
species: Human (Homo sapiens) [TaxId: 9606]

Probab=98.39  E-value=7.6e-09  Score=53.11  Aligned_cols=30  Identities=20%  Similarity=0.181  Sum_probs=24.5

Q ss_pred             CCCCCCCCCCCCCCCCccCCCCChhhhccccccCCC
Q 044013           52 RAKNRPPSSSSISDKLTFFPSPSTWDDHQRSVHTNN   87 (153)
Q Consensus        52 kp~~C~~c~~~~Cgk~~~F~~~~~L~~H~~~~Ht~~   87 (153)
                      |||.|++-   .|||.  |.+.++|+.|++ +|||+
T Consensus         1 kp~~C~~~---gCgk~--F~~~~~L~~H~r-~HTGE   30 (30)
T d1ubdc3           1 KPFQCTFE---GCGKR--FSLDFNLRTHVR-IHTGD   30 (30)
T ss_dssp             CCEECCST---TCCCE--ESCHHHHHHHHH-HHHCC
T ss_pred             CCccCCCC---CCCce--ECcHHHcCcccc-ccCCC
Confidence            69999751   24455  999999999999 99986

>d1x6ea2 g.37.1.1 (A:41-66) Zinc finger protein 24 {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Zinc finger protein 24
species: Human (Homo sapiens) [TaxId: 9606]

Probab=98.37  E-value=6.6e-09  Score=51.41  Aligned_cols=26  Identities=27%  Similarity=0.372  Sum_probs=22.5

Q ss_pred             CCCCCCCCCCCCCCCCccCCCCChhhhccccccC
Q 044013           52 RAKNRPPSSSSISDKLTFFPSPSTWDDHQRSVHT   85 (153)
Q Consensus        52 kp~~C~~c~~~~Cgk~~~F~~~~~L~~H~~~~Ht   85 (153)
                      |||+|..||+.       |.+.++|..|++ +||
T Consensus         1 KPy~C~eCgK~-------F~~~s~L~~Hqr-iHT   26 (26)
T d1x6ea2           1 KPYKCLECGKA-------FSQNSGLINHQR-IHT   26 (26)
T ss_dssp             CCEECSSSCCE-------ESSHHHHHHHHH-HHH
T ss_pred             CCccCCCCcCe-------eccCcccccCcc-CCC
Confidence            79999955555       999999999999 885

>d1zfda_ g.37.1.1 (A:) SWI5 zinc-finger domains {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: SWI5 zinc-finger domains
species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]

Probab=98.31  E-value=1.2e-07  Score=49.22  Aligned_cols=31  Identities=23%  Similarity=0.251  Sum_probs=25.0

Q ss_pred             CCCCCCCCCCCCCCCCCccCCCCChhhhccccccCCC
Q 044013           51 DRAKNRPPSSSSISDKLTFFPSPSTWDDHQRSVHTNN   87 (153)
Q Consensus        51 ekp~~C~~c~~~~Cgk~~~F~~~~~L~~H~~~~Ht~~   87 (153)
                      ||||.|++-   .|+|.  |++.++|.+|++ +|+.+
T Consensus         1 ErP~~C~~p---gC~k~--F~r~~~L~~H~r-~Ht~k   31 (32)
T d1zfda_           1 DRPYSCDHP---GCDKA--FVRNHDLIRHKK-SHQEK   31 (32)
T ss_dssp             CCSBCCCCT---TCCCC--BSSSHHHHHHHG-GGTCC
T ss_pred             CcCeECcCC---CCCCe--eCCHHHHHHHhh-hccCC
Confidence            689999851   24455  999999999999 99864

>d1njqa_ g.37.1.3 (A:) SUPERMAN zinc finger domain {Thale cress (Arabidopsis thaliana) [TaxId: 3702]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Plant C2H2 finger (QALGGH zinc finger)
domain: SUPERMAN zinc finger domain
species: Thale cress (Arabidopsis thaliana) [TaxId: 3702]

Probab=98.30  E-value=1.9e-07  Score=49.54  Aligned_cols=31  Identities=74%  Similarity=1.337  Sum_probs=27.6

Q ss_pred             CcceeccccccccCChhHHHHHHHhhcCCCC
Q 044013           23 GRSYECVFCKRGFTTAQALGGHMNIHRKDRA   53 (153)
Q Consensus        23 ekp~~C~~Cgk~F~~~~~L~~H~r~H~gekp   53 (153)
                      .+.|+|.+|++.|.+.++|..|++.|..++.
T Consensus         3 ~r~~~C~~C~k~F~s~qALGGH~~~Hr~~r~   33 (37)
T d1njqa_           3 PRSYTCSFCKREFRSAQALGGHMNVHRRDRA   33 (37)
T ss_dssp             SSSEECTTTCCEESSHHHHHHHHHTTCCSCT
T ss_pred             CCccCCCCCCCccCCcccccchHhhhcchHH
Confidence            3579999999999999999999999987654

>d2epqa1 g.37.1.1 (A:380-411) PATZ1 {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: PATZ1
species: Human (Homo sapiens) [TaxId: 9606]

Probab=98.26  E-value=2.6e-07  Score=45.91  Aligned_cols=29  Identities=21%  Similarity=0.512  Sum_probs=27.3

Q ss_pred             CcceeccccccccCChhHHHHHHHhhcCC
Q 044013           23 GRSYECVFCKRGFTTAQALGGHMNIHRKD   51 (153)
Q Consensus        23 ekp~~C~~Cgk~F~~~~~L~~H~r~H~ge   51 (153)
                      ||||.|++|+..|..+..+.-|.|.|.|.
T Consensus         1 ekp~~cpic~qrfkrkdrmsyhvrshdg~   29 (32)
T d2epqa1           1 EKPYSCPVCGLRFKRKDRMSYHVRSHDGS   29 (32)
T ss_dssp             CCSSEETTTTEECSCHHHHHHHHHHHSCC
T ss_pred             CCCcccchHHHHhhccccceEeeecccCc
Confidence            68999999999999999999999999875

>d1ubdc4 g.37.1.1 (C:381-408) Ying-yang 1 (yy1, zinc finger domain) {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Ying-yang 1 (yy1, zinc finger domain)
species: Human (Homo sapiens) [TaxId: 9606]

Probab=98.22  E-value=2.1e-07  Score=46.70  Aligned_cols=28  Identities=21%  Similarity=0.245  Sum_probs=22.9

Q ss_pred             CCCCCCCCCCCCCCCCccCCCCChhhhccccccC
Q 044013           52 RAKNRPPSSSSISDKLTFFPSPSTWDDHQRSVHT   85 (153)
Q Consensus        52 kp~~C~~c~~~~Cgk~~~F~~~~~L~~H~~~~Ht   85 (153)
                      |||.|++-   .|||.  |.+.++|+.|++ +||
T Consensus         1 rPf~C~~~---gC~K~--F~~~~~L~~H~r-~HT   28 (28)
T d1ubdc4           1 RPYVCPFD---GCNKK--FAQSTNLKSHIL-THA   28 (28)
T ss_dssp             CCCCCCST---TCCCC--CSSTTTTHHHHH-HHC
T ss_pred             CCcCCCCC---CcCCc--CCCHHHHHHHHh-hcc
Confidence            69999852   35555  999999999999 886

>d1ubdc2 g.37.1.1 (C:323-350) Ying-yang 1 (yy1, zinc finger domain) {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Ying-yang 1 (yy1, zinc finger domain)
species: Human (Homo sapiens) [TaxId: 9606]

Probab=98.20  E-value=4.3e-07  Score=43.91  Aligned_cols=27  Identities=22%  Similarity=0.475  Sum_probs=23.8

Q ss_pred             ceeccccccccCChhHHHHHHHhhcCC
Q 044013           25 SYECVFCKRGFTTAQALGGHMNIHRKD   51 (153)
Q Consensus        25 p~~C~~Cgk~F~~~~~L~~H~r~H~ge   51 (153)
                      .+.|..|||+|...+.|++|+.+|+|+
T Consensus         2 ~hvc~ecgkaf~essklkrh~lvhtge   28 (28)
T d1ubdc2           2 VHVCAECGKAFVESSKLKRHQLVHTGE   28 (28)
T ss_dssp             CEECTTTCCEESSHHHHHHHGGGTSCC
T ss_pred             cchHHHHhHHHHHHHHHHHHhhcccCC
Confidence            468999999999999999999999885

>d2dmda3 g.37.1.1 (A:62-90) Zinc finger protein 64, ZFP68 {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Zinc finger protein 64, ZFP68
species: Human (Homo sapiens) [TaxId: 9606]

Probab=98.19  E-value=4.5e-07  Score=44.10  Aligned_cols=29  Identities=24%  Similarity=0.531  Sum_probs=25.8

Q ss_pred             CcceeccccccccCChhHHHHHHHhhcCC
Q 044013           23 GRSYECVFCKRGFTTAQALGGHMNIHRKD   51 (153)
Q Consensus        23 ekp~~C~~Cgk~F~~~~~L~~H~r~H~ge   51 (153)
                      ++||+|..|...-...+.|..|+|.|+|.
T Consensus         1 erpfkcqlcsy~srnssqltvhlr~htgd   29 (29)
T d2dmda3           1 ERPFKCQICPYASRNSSQLTVHLRSHTGD   29 (29)
T ss_dssp             CCCEECSSSSCEESSHHHHHHHHTTCCSC
T ss_pred             CCcceeeecccccCCchheEEeeecccCc
Confidence            57999999999989999999999999874

>d1a1ia1 g.37.1.1 (A:103-131) ZIF268 {Mouse (Mus musculus) [TaxId: 10090]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: ZIF268
species: Mouse (Mus musculus) [TaxId: 10090]

Probab=98.10  E-value=7.6e-08  Score=48.80  Aligned_cols=29  Identities=28%  Similarity=0.442  Sum_probs=24.0

Q ss_pred             CCCCCCCCCCCCCCCCccCCCCChhhhccccccCC
Q 044013           52 RAKNRPPSSSSISDKLTFFPSPSTWDDHQRSVHTN   86 (153)
Q Consensus        52 kp~~C~~c~~~~Cgk~~~F~~~~~L~~H~~~~Ht~   86 (153)
                      |||.|++-   .|+|.  |.+.++|+.|++ +|+|
T Consensus         1 Kp~~C~~~---gC~k~--F~~~~~L~~H~r-~HtG   29 (29)
T d1a1ia1           1 RPYACPVE---SCDRR--FSRSADLTRHIR-IHTG   29 (29)
T ss_dssp             CCEECCST---TCCCE--ESSHHHHHHHTH-HHHT
T ss_pred             CCeECCCC---CCCcE--ECchhHhhhhcC-ccCC
Confidence            69999752   35566  999999999999 9986

>d2dlqa4 g.37.1.1 (A:8-34) GLI-Krueppel family member HKR3 {Mouse (Mus musculus) [TaxId: 10090]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: GLI-Krueppel family member HKR3
species: Mouse (Mus musculus) [TaxId: 10090]

Probab=98.05  E-value=1.5e-06  Score=41.41  Aligned_cols=26  Identities=27%  Similarity=0.506  Sum_probs=24.6

Q ss_pred             eccccccccCChhHHHHHHHhhcCCC
Q 044013           27 ECVFCKRGFTTAQALGGHMNIHRKDR   52 (153)
Q Consensus        27 ~C~~Cgk~F~~~~~L~~H~r~H~gek   52 (153)
                      +|+.|.|.|..+..|+.|.|.|+|++
T Consensus         2 qcp~c~k~f~skyylkvhnr~htgek   27 (27)
T d2dlqa4           2 ECPTCHKKFLSKYYLKVHNRKHTGEK   27 (27)
T ss_dssp             CCTTTCCCCSSHHHHHHHHHHHSSCC
T ss_pred             cCcchHHHHHHhHhhhhccccccCCC
Confidence            69999999999999999999999986

>d1bboa1 g.37.1.1 (A:1-28) Enhancer binding protein {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Enhancer binding protein
species: Human (Homo sapiens) [TaxId: 9606]

Probab=97.97  E-value=2.7e-06  Score=41.40  Aligned_cols=27  Identities=26%  Similarity=0.416  Sum_probs=25.0

Q ss_pred             eeccccccccCChhHHHHHHHhhcCCC
Q 044013           26 YECVFCKRGFTTAQALGGHMNIHRKDR   52 (153)
Q Consensus        26 ~~C~~Cgk~F~~~~~L~~H~r~H~gek   52 (153)
                      |.|+.||..-..++.|+.|+|+|++++
T Consensus         2 YvC~~Cg~~C~KPSvL~KHIRsHT~~R   28 (28)
T d1bboa1           2 YICEECGIRAKKPSMLKKHIRTHTDVR   28 (28)
T ss_dssp             CBCTTTCCBCSSHHHHHHHHHHTSSCC
T ss_pred             ccccccCcccCCHHHHHHHHHHhcCCC
Confidence            789999999999999999999999875

>d2dmda2 g.37.1.1 (A:8-33) Zinc finger protein 64, ZFP68 {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Zinc finger protein 64, ZFP68
species: Human (Homo sapiens) [TaxId: 9606]

Probab=97.79  E-value=3.1e-06  Score=40.05  Aligned_cols=26  Identities=23%  Similarity=0.318  Sum_probs=21.7

Q ss_pred             CCCCCCCCCCCCCCCccCCCCChhhhccccccCC
Q 044013           53 AKNRPPSSSSISDKLTFFPSPSTWDDHQRSVHTN   86 (153)
Q Consensus        53 p~~C~~c~~~~Cgk~~~F~~~~~L~~H~~~~Ht~   86 (153)
                      |.+|+.|     +|.  |+++..|+.|++ .|+|
T Consensus         1 phkc~~c-----~kc--fsrkdklk~hmr-~htg   26 (26)
T d2dmda2           1 PHKCEVC-----GKC--FSRKDKLKTHMR-CHTG   26 (26)
T ss_dssp             CCCBTTT-----TBC--CCCHHHHHHHGG-GCCC
T ss_pred             CCccchh-----hhH--hcchhHHHHHhh-ccCC
Confidence            6789854     555  999999999999 9986

>d2dmda1 g.37.1.1 (A:34-61) Zinc finger protein 64, ZFP68 {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Zinc finger protein 64, ZFP68
species: Human (Homo sapiens) [TaxId: 9606]

Probab=97.56  E-value=2.5e-05  Score=37.45  Aligned_cols=26  Identities=27%  Similarity=0.683  Sum_probs=24.2

Q ss_pred             cceeccccccccCChhHHHHHHHhhc
Q 044013           24 RSYECVFCKRGFTTAQALGGHMNIHR   49 (153)
Q Consensus        24 kp~~C~~Cgk~F~~~~~L~~H~r~H~   49 (153)
                      |||+|..|..+-...+.|..|+|+|.
T Consensus         2 kp~kck~cdyaaadsssl~kh~rihs   27 (28)
T d2dmda1           2 KPYKCKTCDYAAADSSSLNKHLRIHS   27 (28)
T ss_dssp             CSEECSSSCCEESSHHHHHHHHHHSC
T ss_pred             CCcccccccchhcchhhHhhhhhccc
Confidence            79999999999999999999999986

>d2dmda3 g.37.1.1 (A:62-90) Zinc finger protein 64, ZFP68 {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Zinc finger protein 64, ZFP68
species: Human (Homo sapiens) [TaxId: 9606]

Probab=97.53  E-value=5.2e-06  Score=40.22  Aligned_cols=29  Identities=21%  Similarity=0.178  Sum_probs=24.6

Q ss_pred             CCCCCCCCCCCCCCCCCccCCCCChhhhccccccCCC
Q 044013           51 DRAKNRPPSSSSISDKLTFFPSPSTWDDHQRSVHTNN   87 (153)
Q Consensus        51 ekp~~C~~c~~~~Cgk~~~F~~~~~L~~H~~~~Ht~~   87 (153)
                      ++||+|+.|...       -...+.|..|++ .|||.
T Consensus         1 erpfkcqlcsy~-------srnssqltvhlr-~htgd   29 (29)
T d2dmda3           1 ERPFKCQICPYA-------SRNSSQLTVHLR-SHTGD   29 (29)
T ss_dssp             CCCEECSSSSCE-------ESSHHHHHHHHT-TCCSC
T ss_pred             CCcceeeecccc-------cCCchheEEeee-cccCc
Confidence            689999977665       788899999999 99873

>d2glia5 g.37.1.1 (A:229-257) Five-finger GLI1 {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Five-finger GLI1
species: Human (Homo sapiens) [TaxId: 9606]

Probab=97.53  E-value=2.9e-05  Score=38.22  Aligned_cols=26  Identities=23%  Similarity=0.662  Sum_probs=20.9

Q ss_pred             cceeccc--cccccCChhHHHHHHHhhc
Q 044013           24 RSYECVF--CKRGFTTAQALGGHMNIHR   49 (153)
Q Consensus        24 kp~~C~~--Cgk~F~~~~~L~~H~r~H~   49 (153)
                      |||.|.+  |+|++..+++|+.|++.+.
T Consensus         1 KPY~Ck~~gC~K~YtdPSSLRKH~k~~H   28 (29)
T d2glia5           1 KPYVCKLPGCTKRYTDPSSLRKHVKTVH   28 (29)
T ss_dssp             CCEECCSTTTCCEESSHHHHHHHHHHSC
T ss_pred             CCeecccCCCCcccCCHHHHHHHHHhhC
Confidence            5888876  8888888888888888654

>d1a1ia3 g.37.1.1 (A:160-187) ZIF268 {Mouse (Mus musculus) [TaxId: 10090]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: ZIF268
species: Mouse (Mus musculus) [TaxId: 10090]

Probab=97.48  E-value=7e-06  Score=39.98  Aligned_cols=27  Identities=11%  Similarity=0.249  Sum_probs=23.0

Q ss_pred             CCCCCCCCCCCCCCCCCccCCCCChhhhccccccC
Q 044013           51 DRAKNRPPSSSSISDKLTFFPSPSTWDDHQRSVHT   85 (153)
Q Consensus        51 ekp~~C~~c~~~~Cgk~~~F~~~~~L~~H~~~~Ht   85 (153)
                      ||||.|..|++.       |..+...++|.+ +|.
T Consensus         1 EkPf~C~~Cgrk-------FArsderkRH~k-iH~   27 (28)
T d1a1ia3           1 EKPFACDICGRK-------FARSDERKRHTK-IHL   27 (28)
T ss_dssp             CCCEECTTTCCE-------ESSHHHHHHHHG-GGC
T ss_pred             CCCcccchhhhh-------hhcchhhhhhhh-hcc
Confidence            689999955555       999999999998 885

>d2glia4 g.37.1.1 (A:198-228) Five-finger GLI1 {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Five-finger GLI1
species: Human (Homo sapiens) [TaxId: 9606]

Probab=97.45  E-value=2.3e-05  Score=38.95  Aligned_cols=27  Identities=26%  Similarity=0.655  Sum_probs=18.8

Q ss_pred             cceeccc--cccccCChhHHHHHH-HhhcC
Q 044013           24 RSYECVF--CKRGFTTAQALGGHM-NIHRK   50 (153)
Q Consensus        24 kp~~C~~--Cgk~F~~~~~L~~H~-r~H~g   50 (153)
                      |||.|.+  |.|+|++.+.-..|+ |+|..
T Consensus         1 kPY~C~~~gC~KafsNsSDraKHqnRTHs~   30 (31)
T d2glia4           1 KPYMCEHEGCSKAFSNASDRAKHQNRTHSN   30 (31)
T ss_dssp             CCEECCSTTCCCEESSSSTTHHHHHHTTCS
T ss_pred             CCccccCCChhhhhcchhhhhhhccccccC
Confidence            5777776  777777777777775 66654

>d1tf3a2 g.37.1.1 (A:41-70) Transcription factor IIIA, TFIIIA {Xenopus laevis [TaxId: 8355]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Transcription factor IIIA, TFIIIA
species: Xenopus laevis [TaxId: 8355]

Probab=97.37  E-value=5.4e-05  Score=36.80  Aligned_cols=28  Identities=29%  Similarity=0.668  Sum_probs=24.0

Q ss_pred             cceeccc--cccccCChhHHHHHHHhhcCC
Q 044013           24 RSYECVF--CKRGFTTAQALGGHMNIHRKD   51 (153)
Q Consensus        24 kp~~C~~--Cgk~F~~~~~L~~H~r~H~ge   51 (153)
                      +||.|.+  |.|.|.+...|.+|..+|+|+
T Consensus         1 ~pfpc~~egc~kgf~tlhhltrhs~thtge   30 (30)
T d1tf3a2           1 KPFPCKEEGCEKGFTSLHHLTRHSLTHTGE   30 (30)
T ss_dssp             CSEECCCSSCCCEESSTTHHHHHHHHHHTC
T ss_pred             CCcCcccccccccchhhhhhhhhhccccCC
Confidence            5888875  889999999999999999875

>d1znfa_ g.37.1.1 (A:) XFIN, third domain {Xenopus laevis [TaxId: 8355]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: XFIN, third domain
species: Xenopus laevis [TaxId: 8355]

Probab=97.35  E-value=6.2e-05  Score=35.13  Aligned_cols=24  Identities=38%  Similarity=0.924  Sum_probs=19.7

Q ss_pred             eeccccccccCChhHHHHHHHhhc
Q 044013           26 YECVFCKRGFTTAQALGGHMNIHR   49 (153)
Q Consensus        26 ~~C~~Cgk~F~~~~~L~~H~r~H~   49 (153)
                      |+|..|.+.|..+++|.+|+|+|.
T Consensus         1 ykcglcersfveksalsrhqrvhk   24 (26)
T d1znfa_           1 YKCGLCERSFVEKSALSRHQRVHK   24 (26)
T ss_dssp             CBCSSSCCBCSSHHHHHHHGGGTC
T ss_pred             CcccchHHHHHHHHHHHHHHHhhc
Confidence            678888888888888888888774

>d2epra1 g.37.1.1 (A:350-384) PATZ1 {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: PATZ1
species: Human (Homo sapiens) [TaxId: 9606]

Probab=97.34  E-value=1.1e-05  Score=40.73  Aligned_cols=30  Identities=17%  Similarity=0.223  Sum_probs=25.9

Q ss_pred             CCCCCCCCCCCCCCCccCCCCChhhhccccccCCCCCC
Q 044013           53 AKNRPPSSSSISDKLTFFPSPSTWDDHQRSVHTNNNNH   90 (153)
Q Consensus        53 p~~C~~c~~~~Cgk~~~F~~~~~L~~H~~~~Ht~~kp~   90 (153)
                      ...|.     +|||+  |.....|++|.. .|++++||
T Consensus         5 ~~~ce-----~cgk~--frdvyhlnrhkl-shs~ekpy   34 (35)
T d2epra1           5 QVACE-----ICGKI--FRDVYHLNRHKL-SHSGEKPY   34 (35)
T ss_dssp             SEEET-----TTTEE--ESSHHHHHHHGG-GSCSCCCC
T ss_pred             hhhHH-----HHHHH--HHHHHHHHhhhc-ccCCCCCC
Confidence            34577     66677  999999999999 99999998

>d2j7ja2 g.37.1.1 (A:29-57) Transcription factor IIIA, TFIIIA {Xenopus laevis [TaxId: 8355]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Transcription factor IIIA, TFIIIA
species: Xenopus laevis [TaxId: 8355]

Probab=97.32  E-value=6.9e-05  Score=36.26  Aligned_cols=26  Identities=31%  Similarity=0.708  Sum_probs=22.8

Q ss_pred             cceeccc--cccccCChhHHHHHHHhhc
Q 044013           24 RSYECVF--CKRGFTTAQALGGHMNIHR   49 (153)
Q Consensus        24 kp~~C~~--Cgk~F~~~~~L~~H~r~H~   49 (153)
                      .||+|+.  |++.|..++.|++|..+|.
T Consensus         2 ~py~c~hegcdk~fs~ps~lkrhekvha   29 (29)
T d2j7ja2           2 LPYECPHEGCDKRFSLPSRLKRHEKVHA   29 (29)
T ss_dssp             CCEECCSTTCCCEESSHHHHHHHHHHHH
T ss_pred             CCccCCccCccccccCHHHHhhhhhccC
Confidence            4899985  9999999999999998873

>d2dlqa3 g.37.1.1 (A:63-92) GLI-Krueppel family member HKR3 {Mouse (Mus musculus) [TaxId: 10090]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: GLI-Krueppel family member HKR3
species: Mouse (Mus musculus) [TaxId: 10090]

Probab=97.31  E-value=0.00011  Score=35.60  Aligned_cols=29  Identities=24%  Similarity=0.517  Sum_probs=26.8

Q ss_pred             CcceeccccccccCChhHHHHHHHhhcCC
Q 044013           23 GRSYECVFCKRGFTTAQALGGHMNIHRKD   51 (153)
Q Consensus        23 ekp~~C~~Cgk~F~~~~~L~~H~r~H~ge   51 (153)
                      +..|.|..|...|...-.|..|+-.|+|+
T Consensus         2 eqvftcs~cqe~f~rrmelr~hmvshtge   30 (30)
T d2dlqa3           2 EQVFTCSVCQETFRRRMELRLHMVSHTGE   30 (30)
T ss_dssp             CCCEECSSSCCEESSHHHHHHHHHHHSSS
T ss_pred             cceEEeHHHHHHHHHHHhheeeeecccCC
Confidence            56799999999999999999999999985

>d1klra_ g.37.1.1 (A:) ZFY {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: ZFY
species: Human (Homo sapiens) [TaxId: 9606]

Probab=97.29  E-value=4.9e-05  Score=37.08  Aligned_cols=22  Identities=23%  Similarity=0.674  Sum_probs=11.2

Q ss_pred             ceeccccccccCChhHHHHHHH
Q 044013           25 SYECVFCKRGFTTAQALGGHMN   46 (153)
Q Consensus        25 p~~C~~Cgk~F~~~~~L~~H~r   46 (153)
                      ||+|..|...-...++|+.|+.
T Consensus         2 py~cqyc~yrsadssnlkthik   23 (30)
T d1klra_           2 TYQCQYCEFRSADSSNLKTHIK   23 (30)
T ss_dssp             CCCCSSSSCCCSCSHHHHHHHH
T ss_pred             Cccccccccccccchhhhhhhh
Confidence            4555555544444555555544

>d2csha2 g.37.1.1 (A:61-104) Zinc finger protein 297b {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Zinc finger protein 297b
species: Human (Homo sapiens) [TaxId: 9606]

Probab=97.23  E-value=8.9e-05  Score=39.40  Aligned_cols=25  Identities=24%  Similarity=0.587  Sum_probs=21.9

Q ss_pred             CCcceeccccccccCChhHHHHHHH
Q 044013           22 TGRSYECVFCKRGFTTAQALGGHMN   46 (153)
Q Consensus        22 gekp~~C~~Cgk~F~~~~~L~~H~r   46 (153)
                      |-|||+|.+|+|.|-....+.+|..
T Consensus         2 GiKPYeC~~C~KrFMWRDSF~RH~~   26 (44)
T d2csha2           2 GIKPYECNICAKRFMWRDSFHRHVT   26 (44)
T ss_dssp             CCCCEECSSSCCEESCHHHHHHHHH
T ss_pred             CCCceeccchhhhhhhHHHHHHhhh
Confidence            4689999999999999999988864

>d2adra2 g.37.1.1 (A:131-161) ADR1 {Synthetic, based on Saccharomyces cerevisiae sequence}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: ADR1
species: Synthetic, based on Saccharomyces cerevisiae sequence

Probab=97.03  E-value=0.00017  Score=35.74  Aligned_cols=26  Identities=38%  Similarity=0.731  Sum_probs=20.5

Q ss_pred             ceeccccccccCChhHHHHHHH-hhcC
Q 044013           25 SYECVFCKRGFTTAQALGGHMN-IHRK   50 (153)
Q Consensus        25 p~~C~~Cgk~F~~~~~L~~H~r-~H~g   50 (153)
                      ||.|.+|++.|....-|.+|.. .|.|
T Consensus         1 Pf~C~~C~R~FaRrDLlLRH~qKlH~g   27 (31)
T d2adra2           1 PYPCGLCNRAFTRRDLLIRHAQKIHSG   27 (31)
T ss_dssp             SEECTTTCCEESSHHHHHHHHTTTSCC
T ss_pred             CcccccccchhhHHHHHHHHHHHHhcC
Confidence            7888888888888888888865 4554

>d1klra_ g.37.1.1 (A:) ZFY {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: ZFY
species: Human (Homo sapiens) [TaxId: 9606]

Probab=96.96  E-value=0.00032  Score=34.09  Aligned_cols=30  Identities=10%  Similarity=0.127  Sum_probs=25.1

Q ss_pred             CCCCCCCCCCCCCCCCccCCCCChhhhccccccCCCC
Q 044013           52 RAKNRPPSSSSISDKLTFFPSPSTWDDHQRSVHTNNN   88 (153)
Q Consensus        52 kp~~C~~c~~~~Cgk~~~F~~~~~L~~H~~~~Ht~~k   88 (153)
                      |||.|+.|...       -...++|+.|+++.|..++
T Consensus         1 kpy~cqyc~yr-------sadssnlkthiktkhskek   30 (30)
T d1klra_           1 KTYQCQYCEFR-------SADSSNLKTHIKTKHSKEK   30 (30)
T ss_dssp             CCCCCSSSSCC-------CSCSHHHHHHHHHHTSSCC
T ss_pred             CCccccccccc-------cccchhhhhhhhcccccCC
Confidence            69999988877       8899999999985676653

>d1bboa2 g.37.1.1 (A:29-57) Enhancer binding protein {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Enhancer binding protein
species: Human (Homo sapiens) [TaxId: 9606]

Probab=96.90  E-value=0.00035  Score=33.76  Aligned_cols=23  Identities=35%  Similarity=0.778  Sum_probs=20.5

Q ss_pred             ceeccccccccCChhHHHHHHHh
Q 044013           25 SYECVFCKRGFTTAQALGGHMNI   47 (153)
Q Consensus        25 p~~C~~Cgk~F~~~~~L~~H~r~   47 (153)
                      ||.|..|...|.++.+|..||..
T Consensus         1 py~C~~CnF~FKTKGNLTKHmkS   23 (29)
T d1bboa2           1 PYHCTYCNFSFKTKGNLTKHMKS   23 (29)
T ss_dssp             CEECSSSSCEESSHHHHHHHHHS
T ss_pred             CcccceeeeeEeeccchhHhhhh
Confidence            78999999999999999999875

>d1bboa1 g.37.1.1 (A:1-28) Enhancer binding protein {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Enhancer binding protein
species: Human (Homo sapiens) [TaxId: 9606]

Probab=96.89  E-value=0.00012  Score=35.47  Aligned_cols=27  Identities=22%  Similarity=0.183  Sum_probs=23.1

Q ss_pred             CCCCCCCCCCCCCCccCCCCChhhhccccccCCCC
Q 044013           54 KNRPPSSSSISDKLTFFPSPSTWDDHQRSVHTNNN   88 (153)
Q Consensus        54 ~~C~~c~~~~Cgk~~~F~~~~~L~~H~~~~Ht~~k   88 (153)
                      |.|+.|+..       -..++-|+.|++ .||+++
T Consensus         2 YvC~~Cg~~-------C~KPSvL~KHIR-sHT~~R   28 (28)
T d1bboa1           2 YICEECGIR-------AKKPSMLKKHIR-THTDVR   28 (28)
T ss_dssp             CBCTTTCCB-------CSSHHHHHHHHH-HTSSCC
T ss_pred             ccccccCcc-------cCCHHHHHHHHH-HhcCCC
Confidence            779977666       888899999999 999975

>d1ubdc2 g.37.1.1 (C:323-350) Ying-yang 1 (yy1, zinc finger domain) {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Ying-yang 1 (yy1, zinc finger domain)
species: Human (Homo sapiens) [TaxId: 9606]

Probab=96.81  E-value=0.0001  Score=35.36  Aligned_cols=22  Identities=36%  Similarity=0.407  Sum_probs=19.1

Q ss_pred             CCCCCccCCCCChhhhccccccCCC
Q 044013           63 ISDKLTFFPSPSTWDDHQRSVHTNN   87 (153)
Q Consensus        63 ~Cgk~~~F~~~~~L~~H~~~~Ht~~   87 (153)
                      .|||+  |...+.|++|+. +|||+
T Consensus         7 ecgka--f~essklkrh~l-vhtge   28 (28)
T d1ubdc2           7 ECGKA--FVESSKLKRHQL-VHTGE   28 (28)
T ss_dssp             TTCCE--ESSHHHHHHHGG-GTSCC
T ss_pred             HHhHH--HHHHHHHHHHhh-cccCC
Confidence            56666  999999999999 99986

>d2epqa1 g.37.1.1 (A:380-411) PATZ1 {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: PATZ1
species: Human (Homo sapiens) [TaxId: 9606]

Probab=96.70  E-value=6.4e-05  Score=37.07  Aligned_cols=29  Identities=17%  Similarity=0.282  Sum_probs=24.8

Q ss_pred             CCCCCCCCCCCCCCCCCccCCCCChhhhccccccCCC
Q 044013           51 DRAKNRPPSSSSISDKLTFFPSPSTWDDHQRSVHTNN   87 (153)
Q Consensus        51 ekp~~C~~c~~~~Cgk~~~F~~~~~L~~H~~~~Ht~~   87 (153)
                      ||||.|++|...       |.++.-+..|.+ .|.|.
T Consensus         1 ekp~~cpic~qr-------fkrkdrmsyhvr-shdg~   29 (32)
T d2epqa1           1 EKPYSCPVCGLR-------FKRKDRMSYHVR-SHDGS   29 (32)
T ss_dssp             CCSSEETTTTEE-------CSCHHHHHHHHH-HHSCC
T ss_pred             CCCcccchHHHH-------hhccccceEeee-cccCc
Confidence            689999977777       999999999998 77663

>d2dmda1 g.37.1.1 (A:34-61) Zinc finger protein 64, ZFP68 {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Zinc finger protein 64, ZFP68
species: Human (Homo sapiens) [TaxId: 9606]

Probab=96.58  E-value=0.0001  Score=35.26  Aligned_cols=26  Identities=15%  Similarity=0.298  Sum_probs=22.9

Q ss_pred             CCCCCCCCCCCCCCCCccCCCCChhhhccccccC
Q 044013           52 RAKNRPPSSSSISDKLTFFPSPSTWDDHQRSVHT   85 (153)
Q Consensus        52 kp~~C~~c~~~~Cgk~~~F~~~~~L~~H~~~~Ht   85 (153)
                      |||+|..|...       -...++|+.|++ +|.
T Consensus         2 kp~kck~cdya-------aadsssl~kh~r-ihs   27 (28)
T d2dmda1           2 KPYKCKTCDYA-------AADSSSLNKHLR-IHS   27 (28)
T ss_dssp             CSEECSSSCCE-------ESSHHHHHHHHH-HSC
T ss_pred             CCcccccccch-------hcchhhHhhhhh-ccc
Confidence            79999977777       888999999999 885

>d2glia5 g.37.1.1 (A:229-257) Five-finger GLI1 {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Five-finger GLI1
species: Human (Homo sapiens) [TaxId: 9606]

Probab=96.58  E-value=0.00013  Score=35.84  Aligned_cols=25  Identities=16%  Similarity=0.193  Sum_probs=20.7

Q ss_pred             CCCCCCCCCCCCCCCCccCCCCChhhhccc
Q 044013           52 RAKNRPPSSSSISDKLTFFPSPSTWDDHQR   81 (153)
Q Consensus        52 kp~~C~~c~~~~Cgk~~~F~~~~~L~~H~~   81 (153)
                      |||.|...   .|+|.  |..+++|..|++
T Consensus         1 KPY~Ck~~---gC~K~--YtdPSSLRKH~k   25 (29)
T d2glia5           1 KPYVCKLP---GCTKR--YTDPSSLRKHVK   25 (29)
T ss_dssp             CCEECCST---TTCCE--ESSHHHHHHHHH
T ss_pred             CCeecccC---CCCcc--cCCHHHHHHHHH
Confidence            68999864   45566  999999999998

>d1bhia_ g.37.1.1 (A:) Transactivation domain of cre-bp1/atf-2 {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Transactivation domain of cre-bp1/atf-2
species: Human (Homo sapiens) [TaxId: 9606]

Probab=96.49  E-value=0.0011  Score=34.55  Aligned_cols=28  Identities=25%  Similarity=0.526  Sum_probs=24.0

Q ss_pred             CCcceecc--ccccccCChhHHHHHHHhhc
Q 044013           22 TGRSYECV--FCKRGFTTAQALGGHMNIHR   49 (153)
Q Consensus        22 gekp~~C~--~Cgk~F~~~~~L~~H~r~H~   49 (153)
                      .+|||.|.  -|+.+|.+...|..|...|.
T Consensus         3 ddkPF~C~~pGC~q~F~neDhL~vHk~KH~   32 (38)
T d1bhia_           3 DDKPFLCTAPGCGQRFTNEDHLAVHKHKHE   32 (38)
T ss_dssp             TCCCEECCCTTTCCEESSHHHHHHHHHHHH
T ss_pred             CCCceecCCCCccccccchHHHHHhhhhhe
Confidence            37899995  59999999999999988775

>d1x5wa1 g.37.1.1 (A:8-35) Zinc finger protein 64, ZFP68 {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Zinc finger protein 64, ZFP68
species: Human (Homo sapiens) [TaxId: 9606]

Probab=96.42  E-value=0.0011  Score=31.60  Aligned_cols=25  Identities=28%  Similarity=0.405  Sum_probs=22.8

Q ss_pred             ceeccccccccCChhHHHHHHHhhc
Q 044013           25 SYECVFCKRGFTTAQALGGHMNIHR   49 (153)
Q Consensus        25 p~~C~~Cgk~F~~~~~L~~H~r~H~   49 (153)
                      |-+|+.|...-+++.+|+.|.|+|-
T Consensus         2 pekc~ecsyscsskaalrvh~rihc   26 (28)
T d1x5wa1           2 PEKCSECSYSCSSKAALRIHERIHC   26 (28)
T ss_dssp             SEECSSSSCEESSHHHHHHHHGGGC
T ss_pred             CccCcccccccCcHHHHHHhhcccc
Confidence            5689999999999999999999985

>d1x5wa2 g.37.1.1 (A:36-64) Zinc finger protein 64, ZFP68 {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Zinc finger protein 64, ZFP68
species: Human (Homo sapiens) [TaxId: 9606]

Probab=96.36  E-value=0.0013  Score=31.79  Aligned_cols=24  Identities=25%  Similarity=0.621  Sum_probs=20.1

Q ss_pred             cceeccccccccCChhHHHHHHHh
Q 044013           24 RSYECVFCKRGFTTAQALGGHMNI   47 (153)
Q Consensus        24 kp~~C~~Cgk~F~~~~~L~~H~r~   47 (153)
                      +||+|.+|..--.+.++|..|++.
T Consensus         1 rPFkC~~CsFDtkq~SnL~kH~kk   24 (29)
T d1x5wa2           1 RPFKCNYCSFDTKQPSNLSKHMKK   24 (29)
T ss_dssp             CSEECSSSSCEESSHHHHHHHHHH
T ss_pred             CCcccceecccccCcchHHHHHHH
Confidence            588999998888888889888774

>d2glia2 g.37.1.1 (A:135-167) Five-finger GLI1 {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Five-finger GLI1
species: Human (Homo sapiens) [TaxId: 9606]

Probab=96.28  E-value=0.00098  Score=33.86  Aligned_cols=27  Identities=30%  Similarity=0.582  Sum_probs=21.3

Q ss_pred             ceeccc--c---ccccCChhHHHHHHHhhcCC
Q 044013           25 SYECVF--C---KRGFTTAQALGGHMNIHRKD   51 (153)
Q Consensus        25 p~~C~~--C---gk~F~~~~~L~~H~r~H~ge   51 (153)
                      .|.|.+  |   ++.|.....|..|+|+||||
T Consensus         2 ~y~C~W~~C~R~~~pf~a~YkLv~H~R~HTgE   33 (33)
T d2glia2           2 EFVCHWGGCSRELRPFKAQYMLVVHMRRHTGE   33 (33)
T ss_dssp             CCCCCBTTCTTTTCCCSSHHHHHHHTHHHHCC
T ss_pred             CeEEECCCCCCCCCcchhHHHHHHHHhhcCCC
Confidence            355554  4   46799999999999999986

>d1znfa_ g.37.1.1 (A:) XFIN, third domain {Xenopus laevis [TaxId: 8355]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: XFIN, third domain
species: Xenopus laevis [TaxId: 8355]

Probab=96.10  E-value=0.00089  Score=31.05  Aligned_cols=24  Identities=33%  Similarity=0.347  Sum_probs=20.4

Q ss_pred             CCCCCCCCCCCCCCccCCCCChhhhccccccC
Q 044013           54 KNRPPSSSSISDKLTFFPSPSTWDDHQRSVHT   85 (153)
Q Consensus        54 ~~C~~c~~~~Cgk~~~F~~~~~L~~H~~~~Ht   85 (153)
                      |+|..|..+       |..++.|.+|++ +|.
T Consensus         1 ykcglcers-------fveksalsrhqr-vhk   24 (26)
T d1znfa_           1 YKCGLCERS-------FVEKSALSRHQR-VHK   24 (26)
T ss_dssp             CBCSSSCCB-------CSSHHHHHHHGG-GTC
T ss_pred             CcccchHHH-------HHHHHHHHHHHH-hhc
Confidence            678877776       999999999999 875

>d2glia2 g.37.1.1 (A:135-167) Five-finger GLI1 {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Five-finger GLI1
species: Human (Homo sapiens) [TaxId: 9606]

Probab=96.10  E-value=0.00071  Score=34.41  Aligned_cols=33  Identities=18%  Similarity=0.023  Sum_probs=26.8

Q ss_pred             CCCCCCCCCCCCCCCCccCCCCChhhhccccccCCC
Q 044013           52 RAKNRPPSSSSISDKLTFFPSPSTWDDHQRSVHTNN   87 (153)
Q Consensus        52 kp~~C~~c~~~~Cgk~~~F~~~~~L~~H~~~~Ht~~   87 (153)
                      |-|.|.+-+++-=++.  |.....|..|+| +||||
T Consensus         1 k~y~C~W~~C~R~~~p--f~a~YkLv~H~R-~HTgE   33 (33)
T d2glia2           1 KEFVCHWGGCSRELRP--FKAQYMLVVHMR-RHTGE   33 (33)
T ss_dssp             SCCCCCBTTCTTTTCC--CSSHHHHHHHTH-HHHCC
T ss_pred             CCeEEECCCCCCCCCc--chhHHHHHHHHh-hcCCC
Confidence            3577877666666777  999999999999 99986

>d2dlqa2 g.37.1.1 (A:35-62) GLI-Krueppel family member HKR3 {Mouse (Mus musculus) [TaxId: 10090]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: GLI-Krueppel family member HKR3
species: Mouse (Mus musculus) [TaxId: 10090]

Probab=96.07  E-value=0.0019  Score=30.61  Aligned_cols=22  Identities=23%  Similarity=0.498  Sum_probs=18.8

Q ss_pred             ceeccccccccCChhHHHHHHH
Q 044013           25 SYECVFCKRGFTTAQALGGHMN   46 (153)
Q Consensus        25 p~~C~~Cgk~F~~~~~L~~H~r   46 (153)
                      ||+|..|||.+..+.+|..|..
T Consensus         1 pf~c~kcgkcyfrkenllehea   22 (28)
T d2dlqa2           1 PFECPKCGKCYFRKENLLEHEA   22 (28)
T ss_dssp             SCBCTTTCCBCSSHHHHHHHHH
T ss_pred             CCccccchhhhhhHhHHHHHHH
Confidence            7889999999888888888865

>d2glia4 g.37.1.1 (A:198-228) Five-finger GLI1 {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Five-finger GLI1
species: Human (Homo sapiens) [TaxId: 9606]

Probab=96.05  E-value=0.00093  Score=32.98  Aligned_cols=29  Identities=28%  Similarity=0.315  Sum_probs=22.7

Q ss_pred             CCCCCCCCCCCCCCCCccCCCCChhhhcc-ccccCC
Q 044013           52 RAKNRPPSSSSISDKLTFFPSPSTWDDHQ-RSVHTN   86 (153)
Q Consensus        52 kp~~C~~c~~~~Cgk~~~F~~~~~L~~H~-~~~Ht~   86 (153)
                      |||.|+.-   .|.|+  |+..+.-..|+ | +|..
T Consensus         1 kPY~C~~~---gC~Ka--fsNsSDraKHqnR-THs~   30 (31)
T d2glia4           1 KPYMCEHE---GCSKA--FSNASDRAKHQNR-THSN   30 (31)
T ss_dssp             CCEECCST---TCCCE--ESSSSTTHHHHHH-TTCS
T ss_pred             CCccccCC---Chhhh--hcchhhhhhhccc-cccC
Confidence            68888753   45677  99999999997 7 8864

>d1njqa_ g.37.1.3 (A:) SUPERMAN zinc finger domain {Thale cress (Arabidopsis thaliana) [TaxId: 3702]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Plant C2H2 finger (QALGGH zinc finger)
domain: SUPERMAN zinc finger domain
species: Thale cress (Arabidopsis thaliana) [TaxId: 3702]

Probab=95.73  E-value=0.00069  Score=35.39  Aligned_cols=30  Identities=20%  Similarity=0.272  Sum_probs=24.2

Q ss_pred             CCCCCCCCCCCCCCCCCccCCCCChhhhccccccCCCC
Q 044013           51 DRAKNRPPSSSSISDKLTFFPSPSTWDDHQRSVHTNNN   88 (153)
Q Consensus        51 ekp~~C~~c~~~~Cgk~~~F~~~~~L~~H~~~~Ht~~k   88 (153)
                      .+.|.|..|++.       |....+|-.||+ .|..++
T Consensus         3 ~r~~~C~~C~k~-------F~s~qALGGH~~-~Hr~~r   32 (37)
T d1njqa_           3 PRSYTCSFCKRE-------FRSAQALGGHMN-VHRRDR   32 (37)
T ss_dssp             SSSEECTTTCCE-------ESSHHHHHHHHH-TTCCSC
T ss_pred             CCccCCCCCCCc-------cCCcccccchHh-hhcchH
Confidence            356889955555       999999999999 887654

>d2csha2 g.37.1.1 (A:61-104) Zinc finger protein 297b {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Zinc finger protein 297b
species: Human (Homo sapiens) [TaxId: 9606]

Probab=95.65  E-value=0.00074  Score=35.73  Aligned_cols=26  Identities=8%  Similarity=0.034  Sum_probs=21.3

Q ss_pred             cCCCCCCCCCCCCCCCCCCccCCCCChhhhccc
Q 044013           49 RKDRAKNRPPSSSSISDKLTFFPSPSTWDDHQR   81 (153)
Q Consensus        49 ~gekp~~C~~c~~~~Cgk~~~F~~~~~L~~H~~   81 (153)
                      +|-|||.|..|++.       |-+..++.+|..
T Consensus         1 TGiKPYeC~~C~Kr-------FMWRDSF~RH~~   26 (44)
T d2csha2           1 TGIKPYECNICAKR-------FMWRDSFHRHVT   26 (44)
T ss_dssp             CCCCCEECSSSCCE-------ESCHHHHHHHHH
T ss_pred             CCCCceeccchhhh-------hhhHHHHHHhhh
Confidence            57899999955555       999999998864

>d2dlqa1 g.37.1.1 (A:93-118) GLI-Krueppel family member HKR3 {Mouse (Mus musculus) [TaxId: 10090]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: GLI-Krueppel family member HKR3
species: Mouse (Mus musculus) [TaxId: 10090]

Probab=95.52  E-value=0.0042  Score=28.69  Aligned_cols=22  Identities=32%  Similarity=0.717  Sum_probs=18.7

Q ss_pred             ceeccccccccCChhHHHHHHH
Q 044013           25 SYECVFCKRGFTTAQALGGHMN   46 (153)
Q Consensus        25 p~~C~~Cgk~F~~~~~L~~H~r   46 (153)
                      ||+|..|...|-.+..|..|+-
T Consensus         2 pykcsscsqqfmqkkdlqshmi   23 (26)
T d2dlqa1           2 PYKCSSCSQQFMQKKDLQSHMI   23 (26)
T ss_dssp             SEECSSSCCEESSHHHHHHHHH
T ss_pred             CCcccHHHHHHHHHHHHHHHHH
Confidence            7889999988888888888864

>d2dlqa4 g.37.1.1 (A:8-34) GLI-Krueppel family member HKR3 {Mouse (Mus musculus) [TaxId: 10090]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: GLI-Krueppel family member HKR3
species: Mouse (Mus musculus) [TaxId: 10090]

Probab=95.47  E-value=0.0019  Score=30.37  Aligned_cols=26  Identities=27%  Similarity=0.337  Sum_probs=21.6

Q ss_pred             CCCCCCCCCCCCCccCCCCChhhhccccccCCCC
Q 044013           55 NRPPSSSSISDKLTFFPSPSTWDDHQRSVHTNNN   88 (153)
Q Consensus        55 ~C~~c~~~~Cgk~~~F~~~~~L~~H~~~~Ht~~k   88 (153)
                      +|+.|.+.       |..+..|+.|-+ .|+|++
T Consensus         2 qcp~c~k~-------f~skyylkvhnr-~htgek   27 (27)
T d2dlqa4           2 ECPTCHKK-------FLSKYYLKVHNR-KHTGEK   27 (27)
T ss_dssp             CCTTTCCC-------CSSHHHHHHHHH-HHSSCC
T ss_pred             cCcchHHH-------HHHhHhhhhccc-cccCCC
Confidence            58855555       999999999999 999985

>d2adra2 g.37.1.1 (A:131-161) ADR1 {Synthetic, based on Saccharomyces cerevisiae sequence}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: ADR1
species: Synthetic, based on Saccharomyces cerevisiae sequence

Probab=95.34  E-value=0.001  Score=32.83  Aligned_cols=27  Identities=11%  Similarity=0.149  Sum_probs=21.5

Q ss_pred             CCCCCCCCCCCCCCCccCCCCChhhhccccccCC
Q 044013           53 AKNRPPSSSSISDKLTFFPSPSTWDDHQRSVHTN   86 (153)
Q Consensus        53 p~~C~~c~~~~Cgk~~~F~~~~~L~~H~~~~Ht~   86 (153)
                      ||.|..|++.       |++..-|.+|++..|.|
T Consensus         1 Pf~C~~C~R~-------FaRrDLlLRH~qKlH~g   27 (31)
T d2adra2           1 PYPCGLCNRA-------FTRRDLLIRHAQKIHSG   27 (31)
T ss_dssp             SEECTTTCCE-------ESSHHHHHHHHTTTSCC
T ss_pred             Ccccccccch-------hhHHHHHHHHHHHHhcC
Confidence            7889855555       99999999998757766

>d2eppa1 g.37.1.1 (A:286-338) PATZ1 {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: PATZ1
species: Human (Homo sapiens) [TaxId: 9606]

Probab=95.10  E-value=0.0058  Score=33.32  Aligned_cols=25  Identities=32%  Similarity=0.514  Sum_probs=22.2

Q ss_pred             ceeccccccccCChhHHHHHHHhhc
Q 044013           25 SYECVFCKRGFTTAQALGGHMNIHR   49 (153)
Q Consensus        25 p~~C~~Cgk~F~~~~~L~~H~r~H~   49 (153)
                      -|.|-.|+|.|+....|+.|..-|-
T Consensus         6 l~pCG~CgK~Ftd~~rLr~HEAQHG   30 (53)
T d2eppa1           6 ILPCGLCGKVFTDANRLRQHEAQHG   30 (53)
T ss_dssp             CCCCTTTCCCCSCHHHHHHHHHHHT
T ss_pred             eeeccccccccCCHHHHhHhHHhcC
Confidence            4889999999999999999988774

>d2drpa2 g.37.1.1 (A:140-165) Tramtrack protein (two zinc-finger peptide) {Drosophila melanogaster [TaxId: 7227]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Tramtrack protein (two zinc-finger peptide)
species: Drosophila melanogaster [TaxId: 7227]

Probab=94.93  E-value=0.0089  Score=27.61  Aligned_cols=22  Identities=36%  Similarity=0.881  Sum_probs=19.9

Q ss_pred             eeccccccccCChhHHHHHHHh
Q 044013           26 YECVFCKRGFTTAQALGGHMNI   47 (153)
Q Consensus        26 ~~C~~Cgk~F~~~~~L~~H~r~   47 (153)
                      |.|++|-|.|..+.++..|..+
T Consensus         2 ypcp~cfkeftrkdnm~ahvki   23 (26)
T d2drpa2           2 YPCPFCFKEFTRKDNMTAHVKI   23 (26)
T ss_dssp             EECTTTCCEESCHHHHHHHHHH
T ss_pred             cCCchhhHHhccccCceEEEEE
Confidence            7899999999999999999874

>d1x5wa2 g.37.1.1 (A:36-64) Zinc finger protein 64, ZFP68 {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Zinc finger protein 64, ZFP68
species: Human (Homo sapiens) [TaxId: 9606]

Probab=94.86  E-value=0.00082  Score=32.50  Aligned_cols=26  Identities=23%  Similarity=0.235  Sum_probs=20.6

Q ss_pred             CCCCCCCCCCCCCCCCccCCCCChhhhcccccc
Q 044013           52 RAKNRPPSSSSISDKLTFFPSPSTWDDHQRSVH   84 (153)
Q Consensus        52 kp~~C~~c~~~~Cgk~~~F~~~~~L~~H~~~~H   84 (153)
                      +||+|..|+..       ..+.++|..|++..|
T Consensus         1 rPFkC~~CsFD-------tkq~SnL~kH~kk~H   26 (29)
T d1x5wa2           1 RPFKCNYCSFD-------TKQPSNLSKHMKKFH   26 (29)
T ss_dssp             CSEECSSSSCE-------ESSHHHHHHHHHHHH
T ss_pred             CCcccceeccc-------ccCcchHHHHHHHHc
Confidence            68999976655       788999999987344

>d2j7ja1 g.37.1.1 (A:1-28) Transcription factor IIIA, TFIIIA {Xenopus laevis [TaxId: 8355]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Transcription factor IIIA, TFIIIA
species: Xenopus laevis [TaxId: 8355]

Probab=94.44  E-value=0.013  Score=27.53  Aligned_cols=24  Identities=29%  Similarity=0.533  Sum_probs=19.5

Q ss_pred             eecc--ccccccCChhHHHHHHHhhc
Q 044013           26 YECV--FCKRGFTTAQALGGHMNIHR   49 (153)
Q Consensus        26 ~~C~--~Cgk~F~~~~~L~~H~r~H~   49 (153)
                      |.|.  -|+|+|.....|+.|+-+|+
T Consensus         2 yvchfe~c~kafkkhnqlkvhqf~ht   27 (28)
T d2j7ja1           2 YVCHFENCGKAFKKHNQLKVHQFSHT   27 (28)
T ss_dssp             EECCSTTCCCEESSHHHHHHHHHHHH
T ss_pred             eEEEecCchHHHhhccceEEEeeccc
Confidence            5665  48999998888999988876

>d1bboa2 g.37.1.1 (A:29-57) Enhancer binding protein {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Enhancer binding protein
species: Human (Homo sapiens) [TaxId: 9606]

Probab=94.38  E-value=0.0028  Score=30.44  Aligned_cols=22  Identities=14%  Similarity=0.158  Sum_probs=19.4

Q ss_pred             CCCCCCCCCCCCCCCccCCCCChhhhccc
Q 044013           53 AKNRPPSSSSISDKLTFFPSPSTWDDHQR   81 (153)
Q Consensus        53 p~~C~~c~~~~Cgk~~~F~~~~~L~~H~~   81 (153)
                      ||.|..|..+       |.+..+|..||+
T Consensus         1 py~C~~CnF~-------FKTKGNLTKHmk   22 (29)
T d1bboa2           1 PYHCTYCNFS-------FKTKGNLTKHMK   22 (29)
T ss_dssp             CEECSSSSCE-------ESSHHHHHHHHH
T ss_pred             Ccccceeeee-------EeeccchhHhhh
Confidence            7889977766       999999999997

>d2j7ja2 g.37.1.1 (A:29-57) Transcription factor IIIA, TFIIIA {Xenopus laevis [TaxId: 8355]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Transcription factor IIIA, TFIIIA
species: Xenopus laevis [TaxId: 8355]

Probab=94.22  E-value=0.0021  Score=30.82  Aligned_cols=27  Identities=33%  Similarity=0.457  Sum_probs=21.2

Q ss_pred             CCCCCCCCCCCCCCCCccCCCCChhhhcccccc
Q 044013           52 RAKNRPPSSSSISDKLTFFPSPSTWDDHQRSVH   84 (153)
Q Consensus        52 kp~~C~~c~~~~Cgk~~~F~~~~~L~~H~~~~H   84 (153)
                      .||+|+.-   .|+|.  |+.++-|++|.+ +|
T Consensus         2 ~py~c~he---gcdk~--fs~ps~lkrhek-vh   28 (29)
T d2j7ja2           2 LPYECPHE---GCDKR--FSLPSRLKRHEK-VH   28 (29)
T ss_dssp             CCEECCST---TCCCE--ESSHHHHHHHHH-HH
T ss_pred             CCccCCcc---Ccccc--ccCHHHHhhhhh-cc
Confidence            58888753   45566  999999999988 66

>d1tf3a2 g.37.1.1 (A:41-70) Transcription factor IIIA, TFIIIA {Xenopus laevis [TaxId: 8355]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Transcription factor IIIA, TFIIIA
species: Xenopus laevis [TaxId: 8355]

Probab=93.91  E-value=0.0042  Score=29.88  Aligned_cols=30  Identities=20%  Similarity=0.136  Sum_probs=23.0

Q ss_pred             CCCCCCCCCCCCCCCCccCCCCChhhhccccccCCC
Q 044013           52 RAKNRPPSSSSISDKLTFFPSPSTWDDHQRSVHTNN   87 (153)
Q Consensus        52 kp~~C~~c~~~~Cgk~~~F~~~~~L~~H~~~~Ht~~   87 (153)
                      +||.|..-   .|.|.  |.....|.+|.. +|+|+
T Consensus         1 ~pfpc~~e---gc~kg--f~tlhhltrhs~-thtge   30 (30)
T d1tf3a2           1 KPFPCKEE---GCEKG--FTSLHHLTRHSL-THTGE   30 (30)
T ss_dssp             CSEECCCS---SCCCE--ESSTTHHHHHHH-HHHTC
T ss_pred             CCcCcccc---ccccc--chhhhhhhhhhc-cccCC
Confidence            57766532   45566  999999999998 89885

>d1tf3a1 g.37.1.1 (A:1-40) Transcription factor IIIA, TFIIIA {Xenopus laevis [TaxId: 8355]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Transcription factor IIIA, TFIIIA
species: Xenopus laevis [TaxId: 8355]

Probab=93.59  E-value=0.028  Score=27.31  Aligned_cols=28  Identities=25%  Similarity=0.669  Sum_probs=24.2

Q ss_pred             cceeccc--cccccCChhHHHHHHHhhcCC
Q 044013           24 RSYECVF--CKRGFTTAQALGGHMNIHRKD   51 (153)
Q Consensus        24 kp~~C~~--Cgk~F~~~~~L~~H~r~H~ge   51 (153)
                      |.|.|.+  |+..|.....|..|+-.||||
T Consensus         2 k~~iCsf~dC~A~ynk~wkL~AHLckHTGe   31 (31)
T d1tf3a1           2 KRYICSFADCGAAYNKNWKLQAHLSKHTGE   31 (31)
T ss_dssp             CCEECSSGGGCCEESSHHHHHHHHHHHHCC
T ss_pred             CceEeeCCCcchhhccchhhhHHhhhhcCC
Confidence            4588875  999999999999999999986

>d1x6ha1 g.37.1.1 (A:44-80) Transcriptional repressor CTCF {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Transcriptional repressor CTCF
species: Human (Homo sapiens) [TaxId: 9606]

Probab=93.43  E-value=0.028  Score=28.16  Aligned_cols=26  Identities=19%  Similarity=0.482  Sum_probs=22.3

Q ss_pred             ceeccccccccCChhHHHHHHHhhcC
Q 044013           25 SYECVFCKRGFTTAQALGGHMNIHRK   50 (153)
Q Consensus        25 p~~C~~Cgk~F~~~~~L~~H~r~H~g   50 (153)
                      .|.|..|||.|.....+.+|-..-+|
T Consensus         4 afvcskcgktftrrntm~rha~nc~g   29 (37)
T d1x6ha1           4 AFVCSKCGKTFTRRNTMARHADNCAG   29 (37)
T ss_dssp             CEECSSSCCEESCHHHHHHHHHHCCC
T ss_pred             eeeecccccchhcchHHHHHhhhcCC
Confidence            58999999999999999998776554

>d2dlqa1 g.37.1.1 (A:93-118) GLI-Krueppel family member HKR3 {Mouse (Mus musculus) [TaxId: 10090]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: GLI-Krueppel family member HKR3
species: Mouse (Mus musculus) [TaxId: 10090]

Probab=92.95  E-value=0.0042  Score=28.66  Aligned_cols=22  Identities=14%  Similarity=0.122  Sum_probs=18.9

Q ss_pred             CCCCCCCCCCCCCCCccCCCCChhhhccc
Q 044013           53 AKNRPPSSSSISDKLTFFPSPSTWDDHQR   81 (153)
Q Consensus        53 p~~C~~c~~~~Cgk~~~F~~~~~L~~H~~   81 (153)
                      ||+|..|+..       |-++..|+.||.
T Consensus         2 pykcsscsqq-------fmqkkdlqshmi   23 (26)
T d2dlqa1           2 PYKCSSCSQQ-------FMQKKDLQSHMI   23 (26)
T ss_dssp             SEECSSSCCE-------ESSHHHHHHHHH
T ss_pred             CCcccHHHHH-------HHHHHHHHHHHH
Confidence            7899977777       999999999985

>d2dlqa3 g.37.1.1 (A:63-92) GLI-Krueppel family member HKR3 {Mouse (Mus musculus) [TaxId: 10090]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: GLI-Krueppel family member HKR3
species: Mouse (Mus musculus) [TaxId: 10090]

Probab=92.10  E-value=0.0075  Score=28.88  Aligned_cols=29  Identities=14%  Similarity=0.119  Sum_probs=24.0

Q ss_pred             CCCCCCCCCCCCCCCCCccCCCCChhhhccccccCCC
Q 044013           51 DRAKNRPPSSSSISDKLTFFPSPSTWDDHQRSVHTNN   87 (153)
Q Consensus        51 ekp~~C~~c~~~~Cgk~~~F~~~~~L~~H~~~~Ht~~   87 (153)
                      +..|.|..|...       |.+.-.|..||- .|+|+
T Consensus         2 eqvftcs~cqe~-------f~rrmelr~hmv-shtge   30 (30)
T d2dlqa3           2 EQVFTCSVCQET-------FRRRMELRLHMV-SHTGE   30 (30)
T ss_dssp             CCCEECSSSCCE-------ESSHHHHHHHHH-HHSSS
T ss_pred             cceEEeHHHHHH-------HHHHHhheeeee-cccCC
Confidence            566888866666       999999999998 89885

>d1nnqa2 g.41.5.1 (A:135-171) Rubrerythrin, C-terminal domain {Archaeon Pyrococcus furiosus [TaxId: 2261]}

class: Small proteins
fold: Rubredoxin-like
superfamily: Rubredoxin-like
family: Rubredoxin
domain: Rubrerythrin, C-terminal domain
species: Archaeon Pyrococcus furiosus [TaxId: 2261]

Probab=91.41  E-value=0.051  Score=28.02  Aligned_cols=27  Identities=15%  Similarity=0.364  Sum_probs=20.4

Q ss_pred             CcceeccccccccCChhHHHHHHHhhcCCCCCCCCCCCCC
Q 044013           23 GRSYECVFCKRGFTTAQALGGHMNIHRKDRAKNRPPSSSS   62 (153)
Q Consensus        23 ekp~~C~~Cgk~F~~~~~L~~H~r~H~gekp~~C~~c~~~   62 (153)
                      ++-|.|.+||..             +.|+-|-.|++|+..
T Consensus         3 ~~~~~C~vCG~i-------------~~g~~P~~CPvCg~~   29 (37)
T d1nnqa2           3 KKVYICPICGYT-------------AVDEAPEYCPVCGAP   29 (37)
T ss_dssp             SCEEECTTTCCE-------------EESCCCSBCTTTCCB
T ss_pred             CcEEECCCCCCE-------------ecCCCCCcCCCCCCc
Confidence            456899999964             456778899977654

>d2dlqa2 g.37.1.1 (A:35-62) GLI-Krueppel family member HKR3 {Mouse (Mus musculus) [TaxId: 10090]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: GLI-Krueppel family member HKR3
species: Mouse (Mus musculus) [TaxId: 10090]

Probab=91.38  E-value=0.025  Score=26.58  Aligned_cols=22  Identities=9%  Similarity=0.149  Sum_probs=17.4

Q ss_pred             CCCCCCCCCCCCCCCccCCCCChhhhccc
Q 044013           53 AKNRPPSSSSISDKLTFFPSPSTWDDHQR   81 (153)
Q Consensus        53 p~~C~~c~~~~Cgk~~~F~~~~~L~~H~~   81 (153)
                      ||+|..|++.       |-++.+|..|..
T Consensus         1 pf~c~kcgkc-------yfrkenllehea   22 (28)
T d2dlqa2           1 PFECPKCGKC-------YFRKENLLEHEA   22 (28)
T ss_dssp             SCBCTTTCCB-------CSSHHHHHHHHH
T ss_pred             CCccccchhh-------hhhHhHHHHHHH
Confidence            7899966655       989999988863

>d1yuza2 g.41.5.1 (A:167-202) Nigerythrin, C-terminal domain {Desulfovibrio vulgaris [TaxId: 881]}

class: Small proteins
fold: Rubredoxin-like
superfamily: Rubredoxin-like
family: Rubredoxin
domain: Nigerythrin, C-terminal domain
species: Desulfovibrio vulgaris [TaxId: 881]

Probab=91.02  E-value=0.061  Score=27.54  Aligned_cols=27  Identities=19%  Similarity=0.351  Sum_probs=20.6

Q ss_pred             CcceeccccccccCChhHHHHHHHhhcCCCCCCCCCCCCC
Q 044013           23 GRSYECVFCKRGFTTAQALGGHMNIHRKDRAKNRPPSSSS   62 (153)
Q Consensus        23 ekp~~C~~Cgk~F~~~~~L~~H~r~H~gekp~~C~~c~~~   62 (153)
                      ++-|.|.+||.             +|.|+-|-+|++|+..
T Consensus         3 ~~~~vC~vCGy-------------i~~g~~Pe~CPvCg~~   29 (36)
T d1yuza2           3 DKFHLCPICGY-------------IHKGEDFEKCPICFRP   29 (36)
T ss_dssp             CCEEECSSSCC-------------EEESSCCSBCTTTCCB
T ss_pred             CCEEECCCCCC-------------EeeCCCCCcCCCCCCc
Confidence            56799999996             4566778899977654

>d2ct1a1 g.37.1.1 (A:44-71) Transcriptional repressor CTCF {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Transcriptional repressor CTCF
species: Human (Homo sapiens) [TaxId: 9606]

Probab=90.89  E-value=0.083  Score=24.77  Aligned_cols=23  Identities=22%  Similarity=0.564  Sum_probs=19.6

Q ss_pred             ceeccccccccCChhHHHHHHHh
Q 044013           25 SYECVFCKRGFTTAQALGGHMNI   47 (153)
Q Consensus        25 p~~C~~Cgk~F~~~~~L~~H~r~   47 (153)
                      .|.|+.|+.....++.|..|++.
T Consensus         2 k~qcphc~tiiarksdlrvhlrn   24 (28)
T d2ct1a1           2 KFHCPHCDTVIARKSDLGVHLRK   24 (28)
T ss_dssp             SEECSSSSCEESSHHHHHHHHHH
T ss_pred             CccCCcchhheeehhhhhHHhhh
Confidence            37899999988899999999873

>d1yuja_ g.37.1.1 (A:) GAGA factor {Drosophila melanogaster [TaxId: 7227]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: GAGA factor
species: Drosophila melanogaster [TaxId: 7227]

Probab=90.79  E-value=0.17  Score=27.20  Aligned_cols=31  Identities=13%  Similarity=0.388  Sum_probs=25.8

Q ss_pred             ccCCCCcceeccccccccCChhHHHHHHHhh
Q 044013           18 TDAGTGRSYECVFCKRGFTTAQALGGHMNIH   48 (153)
Q Consensus        18 ~~~~gekp~~C~~Cgk~F~~~~~L~~H~r~H   48 (153)
                      .++-.+.|-.|++|+.......+|.+|...-
T Consensus        17 srs~s~qpatcpic~avirqsrnlrrhlel~   47 (54)
T d1yuja_          17 SRSQSEQPATCPICYAVIRQSRNLRRHLELR   47 (54)
T ss_dssp             TTTTTSCCEECTTTCCEESSHHHHHHHHHHH
T ss_pred             ccccccCCCCCchHHHHHHHHHHHHHHHHHH
Confidence            4455578999999999999999999998753

>d1bhia_ g.37.1.1 (A:) Transactivation domain of cre-bp1/atf-2 {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Transactivation domain of cre-bp1/atf-2
species: Human (Homo sapiens) [TaxId: 9606]

Probab=90.74  E-value=0.013  Score=30.31  Aligned_cols=28  Identities=18%  Similarity=0.267  Sum_probs=21.4

Q ss_pred             CCCCCCC--CCCCCCCCCCCccCCCCChhhhccccccC
Q 044013           50 KDRAKNR--PPSSSSISDKLTFFPSPSTWDDHQRSVHT   85 (153)
Q Consensus        50 gekp~~C--~~c~~~~Cgk~~~F~~~~~L~~H~~~~Ht   85 (153)
                      .+|||.|  +-|+.+       |.....|..|.. .|.
T Consensus         3 ddkPF~C~~pGC~q~-------F~neDhL~vHk~-KH~   32 (38)
T d1bhia_           3 DDKPFLCTAPGCGQR-------FTNEDHLAVHKH-KHE   32 (38)
T ss_dssp             TCCCEECCCTTTCCE-------ESSHHHHHHHHH-HHH
T ss_pred             CCCceecCCCCcccc-------ccchHHHHHhhh-hhe
Confidence            4899999  445555       999999999986 553

>d1zr9a1 g.37.1.4 (A:28-94) Zinc finger protein 593, ZNF593 {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: HkH motif-containing C2H2 finger
domain: Zinc finger protein 593, ZNF593
species: Human (Homo sapiens) [TaxId: 9606]

Probab=90.60  E-value=0.041  Score=32.25  Aligned_cols=26  Identities=27%  Similarity=0.494  Sum_probs=22.3

Q ss_pred             CCcceeccccccccCChhHHHHHHHh
Q 044013           22 TGRSYECVFCKRGFTTAQALGGHMNI   47 (153)
Q Consensus        22 gekp~~C~~Cgk~F~~~~~L~~H~r~   47 (153)
                      |.-.|-|..|+|.|.+...|..|+++
T Consensus        12 G~gqfYCv~C~K~F~se~~l~~H~ks   37 (67)
T d1zr9a1          12 GGGLHRCLACARYFIDSTNLKTHFRS   37 (67)
T ss_dssp             GGGCSEETTTTEECSSHHHHHHHTTC
T ss_pred             CCCEEecccccCccCCHHHHHHHHcc
Confidence            34569999999999999999999763

>d2ctda2 g.37.1.1 (A:61-90) Zinc finger protein 512, ZNF512 {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Zinc finger protein 512, ZNF512
species: Human (Homo sapiens) [TaxId: 9606]

Probab=90.53  E-value=0.13  Score=24.41  Aligned_cols=23  Identities=13%  Similarity=0.433  Sum_probs=19.3

Q ss_pred             ceeccccccccCChhHHHHHHHh
Q 044013           25 SYECVFCKRGFTTAQALGGHMNI   47 (153)
Q Consensus        25 p~~C~~Cgk~F~~~~~L~~H~r~   47 (153)
                      .|.|..|||...+...++-|...
T Consensus         2 ~ftc~hcgkqlks~~gmkyhvma   24 (30)
T d2ctda2           2 MFTCHHCGKQLRSLAGMKYHVMA   24 (30)
T ss_dssp             CCCCSSSCCCCSSHHHHHHHHHH
T ss_pred             ceechhHHHHHhhccCceEEEee
Confidence            47899999999999988888764

>d1vd4a_ g.41.3.1 (A:) Transcription initiation factor TFIIE-alpha {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: Rubredoxin-like
superfamily: Zinc beta-ribbon
family: Transcriptional factor domain
domain: Transcription initiation factor TFIIE-alpha
species: Human (Homo sapiens) [TaxId: 9606]

Probab=87.91  E-value=0.13  Score=29.44  Aligned_cols=37  Identities=16%  Similarity=0.204  Sum_probs=26.1

Q ss_pred             CcceeccccccccCChhHHHHHHHhhcCCCCCCCCCCCCC
Q 044013           23 GRSYECVFCKRGFTTAQALGGHMNIHRKDRAKNRPPSSSS   62 (153)
Q Consensus        23 ekp~~C~~Cgk~F~~~~~L~~H~r~H~gekp~~C~~c~~~   62 (153)
                      ...|.|+.|++.|+...++..   +-.-.--|.|..|+-.
T Consensus        12 ~~~y~Cp~C~~~ys~Lda~~L---~d~~~~~F~C~~C~~e   48 (62)
T d1vd4a_          12 RASFKCPVCSSTFTDLEANQL---FDPMTGTFRCTFCHTE   48 (62)
T ss_dssp             SSEEECSSSCCEEEHHHHHHH---EETTTTEEBCSSSCCB
T ss_pred             CCceECCCCCCCcchhhHHHh---cCcCCCeEEecCCCCE
Confidence            567999999999988766543   3333456889866543

>d1y0jb1 g.37.1.2 (B:1-36) U-shaped transcription factor, different fingers {Fruit fly (Drosophila melanogaster) [TaxId: 7227]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: C2HC finger
domain: U-shaped transcription factor, different fingers
species: Fruit fly (Drosophila melanogaster) [TaxId: 7227]

Probab=87.58  E-value=0.14  Score=25.27  Aligned_cols=22  Identities=23%  Similarity=0.612  Sum_probs=18.8

Q ss_pred             ceeccccccccCChhHHHHHHH
Q 044013           25 SYECVFCKRGFTTAQALGGHMN   46 (153)
Q Consensus        25 p~~C~~Cgk~F~~~~~L~~H~r   46 (153)
                      .|.|.-||-.|+..+.|..|+.
T Consensus         8 rf~c~pcgirfss~stleahqt   29 (36)
T d1y0jb1           8 RFMCLPCGIAFSSPSTLEAHQA   29 (36)
T ss_dssp             CCBCTTTCCBCSCHHHHHHHTT
T ss_pred             ceeccccceeecChhHHHhhhh
Confidence            3889999999999999998863

>d1ubdc1 g.37.1.1 (C:295-322) Ying-yang 1 (yy1, zinc finger domain) {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Ying-yang 1 (yy1, zinc finger domain)
species: Human (Homo sapiens) [TaxId: 9606]

Probab=86.31  E-value=0.21  Score=23.41  Aligned_cols=20  Identities=25%  Similarity=0.497  Sum_probs=17.5

Q ss_pred             ccccccCChhHHHHHHHhhc
Q 044013           30 FCKRGFTTAQALGGHMNIHR   49 (153)
Q Consensus        30 ~Cgk~F~~~~~L~~H~r~H~   49 (153)
                      -|.|.|...++++.|+.+|-
T Consensus         8 gC~K~Frd~saMRKHlhtHG   27 (28)
T d1ubdc1           8 GCTKMFRDNSAMRKHLHTHG   27 (28)
T ss_dssp             TCCCEESSHHHHHHHHGGGS
T ss_pred             cHHHHhhchHHHHHHhhccC
Confidence            49999999999999988773

>d2drpa1 g.37.1.1 (A:103-139) Tramtrack protein (two zinc-finger peptide) {Drosophila melanogaster [TaxId: 7227]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Tramtrack protein (two zinc-finger peptide)
species: Drosophila melanogaster [TaxId: 7227]

Probab=85.05  E-value=0.23  Score=24.75  Aligned_cols=25  Identities=24%  Similarity=0.545  Sum_probs=20.9

Q ss_pred             CcceeccccccccCChhHHHHHHHh
Q 044013           23 GRSYECVFCKRGFTTAQALGGHMNI   47 (153)
Q Consensus        23 ekp~~C~~Cgk~F~~~~~L~~H~r~   47 (153)
                      +..|.|.+|.+.+..-+++-+|--+
T Consensus         6 ~~~yRC~~C~r~YTHISNFCRHyvt   30 (37)
T d2drpa1           6 EHTYRCKVCSRVYTHISNFCRHYVT   30 (37)
T ss_dssp             TTEEECTTTCCEESSHHHHHHHHHH
T ss_pred             CcEEEeehhhHHHHHHHHHHHHHHh
Confidence            4579999999999999998888653

>d1x6fa1 g.37.1.1 (A:8-82) Zinc finger protein 462, ZNF462 {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Zinc finger protein 462, ZNF462
species: Human (Homo sapiens) [TaxId: 9606]

Probab=83.84  E-value=0.41  Score=27.47  Aligned_cols=27  Identities=30%  Similarity=0.807  Sum_probs=24.7

Q ss_pred             ceeccccccccCChhHHHHHHHhhcCC
Q 044013           25 SYECVFCKRGFTTAQALGGHMNIHRKD   51 (153)
Q Consensus        25 p~~C~~Cgk~F~~~~~L~~H~r~H~ge   51 (153)
                      .|.|..|.-.|.....|..|+..|..+
T Consensus        18 ~yQC~HCd~K~~s~~el~~hl~~hnee   44 (75)
T d1x6fa1          18 TYQCKHCDSKLQSTAELTSHLNIHNEE   44 (75)
T ss_dssp             CEECSSSCCEESSHHHHHHHHHHHHHH
T ss_pred             eeeechhHHHHhhHHHHHHHHHhccHH
Confidence            699999999999999999999999753