Query 044014
Match_columns 127
No_of_seqs 103 out of 146
Neff 5.3
Searched_HMMs 29240
Date Mon Mar 25 18:26:28 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/044014.a3m -d /work/01045/syshi/HHdatabase/pdb70.hhm -o /work/01045/syshi/hhsearch_pdb/044014hhsearch_pdb -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 3qj4_A Renalase; FAD/NAD(P)-bi 99.7 2.5E-17 8.6E-22 130.1 8.3 108 12-124 126-255 (342)
2 1yvv_A Amine oxidase, flavin-c 99.5 3.1E-13 1.1E-17 104.9 10.3 105 13-124 123-242 (336)
3 3nks_A Protoporphyrinogen oxid 98.3 8.2E-07 2.8E-11 72.2 7.1 108 12-123 251-377 (477)
4 3lov_A Protoporphyrinogen oxid 97.9 2.3E-05 8E-10 63.8 6.3 64 12-77 251-324 (475)
5 3i6d_A Protoporphyrinogen oxid 97.8 5.1E-05 1.8E-09 60.9 6.7 62 12-74 250-322 (470)
6 2ivd_A PPO, PPOX, protoporphyr 97.6 0.00011 3.8E-09 59.8 6.5 105 12-120 252-378 (478)
7 2yg5_A Putrescine oxidase; oxi 97.1 0.0012 3.9E-08 53.3 7.1 101 12-120 229-347 (453)
8 2vvm_A Monoamine oxidase N; FA 96.5 0.0022 7.7E-08 52.4 4.2 85 12-101 273-374 (495)
9 3ka7_A Oxidoreductase; structu 96.4 0.018 6.3E-07 45.6 9.1 101 12-119 213-336 (425)
10 4dsg_A UDP-galactopyranose mut 96.0 0.018 6.3E-07 47.9 7.5 61 12-74 231-309 (484)
11 1s3e_A Amine oxidase [flavin-c 96.0 0.0063 2.2E-07 50.3 4.6 62 12-74 229-305 (520)
12 3nrn_A Uncharacterized protein 96.0 0.016 5.4E-07 46.3 6.8 60 12-73 206-279 (421)
13 2jae_A L-amino acid oxidase; o 96.0 0.0062 2.1E-07 49.7 4.4 88 12-100 254-359 (489)
14 2iid_A L-amino-acid oxidase; f 95.5 0.021 7.1E-07 46.7 5.6 63 12-74 255-335 (498)
15 1b37_A Protein (polyamine oxid 95.1 0.034 1.2E-06 45.4 5.8 62 12-74 231-309 (472)
16 1sez_A Protoporphyrinogen oxid 93.7 0.086 3E-06 42.9 5.3 63 12-74 258-345 (504)
17 2b9w_A Putative aminooxidase; 93.4 0.04 1.4E-06 43.8 2.7 42 13-56 221-263 (424)
18 4gut_A Lysine-specific histone 92.1 0.19 6.5E-06 45.0 5.4 62 12-74 546-624 (776)
19 4dgk_A Phytoene dehydrogenase; 91.8 0.29 9.8E-06 39.7 5.8 63 12-75 238-318 (501)
20 3k7m_X 6-hydroxy-L-nicotine ox 90.9 0.26 9E-06 39.0 4.6 62 12-74 220-296 (431)
21 1rsg_A FMS1 protein; FAD bindi 90.8 0.41 1.4E-05 39.5 5.9 62 12-74 217-305 (516)
22 4gde_A UDP-galactopyranose mut 90.0 0.39 1.3E-05 38.8 5.0 60 12-73 239-308 (513)
23 2z3y_A Lysine-specific histone 86.1 0.6 2E-05 40.4 3.9 64 12-75 413-500 (662)
24 2xag_A Lysine-specific histone 81.3 1.2 4.1E-05 40.3 3.9 64 12-75 584-671 (852)
25 4a9w_A Monooxygenase; baeyer-v 67.1 4.3 0.00015 30.4 3.3 35 13-49 94-130 (357)
26 1ryi_A Glycine oxidase; flavop 66.6 5.1 0.00017 30.8 3.6 57 14-73 183-245 (382)
27 2gv8_A Monooxygenase; FMO, FAD 66.3 4.3 0.00015 32.6 3.3 36 13-48 133-174 (447)
28 3d1c_A Flavin-containing putat 61.9 6.7 0.00023 29.8 3.5 34 14-49 107-141 (369)
29 1i8t_A UDP-galactopyranose mut 61.9 4 0.00014 32.3 2.3 35 39-73 223-259 (367)
30 2bi7_A UDP-galactopyranose mut 59.7 5.6 0.00019 31.8 2.8 33 39-71 226-260 (384)
31 3lzw_A Ferredoxin--NADP reduct 58.8 6 0.00021 29.4 2.7 34 14-49 86-121 (332)
32 3nyc_A D-arginine dehydrogenas 58.2 5.3 0.00018 30.4 2.3 57 14-73 173-236 (381)
33 3pvc_A TRNA 5-methylaminomethy 54.9 9 0.00031 33.0 3.5 57 14-71 431-491 (689)
34 3ps9_A TRNA 5-methylaminomethy 54.6 8.7 0.0003 32.9 3.3 57 13-71 435-495 (676)
35 3fbs_A Oxidoreductase; structu 53.6 9.1 0.00031 27.9 2.9 32 16-48 77-109 (297)
36 2uzz_A N-methyl-L-tryptophan o 53.2 10 0.00034 28.9 3.2 54 14-70 168-223 (372)
37 2gf3_A MSOX, monomeric sarcosi 52.8 23 0.0008 27.0 5.2 56 14-72 169-230 (389)
38 3f8d_A Thioredoxin reductase ( 52.0 12 0.00041 27.5 3.3 36 9-47 85-121 (323)
39 2ywl_A Thioredoxin reductase r 51.5 12 0.0004 25.7 3.0 37 9-49 71-108 (180)
40 3dme_A Conserved exported prot 51.4 13 0.00044 27.9 3.5 42 14-56 169-213 (369)
41 2zbw_A Thioredoxin reductase; 50.8 12 0.00042 28.0 3.3 35 14-49 84-119 (335)
42 4ap3_A Steroid monooxygenase; 49.8 13 0.00046 31.3 3.7 35 13-48 119-156 (549)
43 3gwf_A Cyclohexanone monooxyge 49.6 12 0.0004 31.6 3.2 36 12-48 106-144 (540)
44 1v0j_A UDP-galactopyranose mut 49.1 8.6 0.00029 30.7 2.3 35 39-73 237-273 (399)
45 2xdo_A TETX2 protein; tetracyc 48.7 17 0.00057 28.4 3.9 36 13-49 144-180 (398)
46 3s5w_A L-ornithine 5-monooxyge 46.7 17 0.00057 29.0 3.6 35 13-47 334-373 (463)
47 2xve_A Flavin-containing monoo 46.3 12 0.0004 30.6 2.7 37 12-48 120-163 (464)
48 3v76_A Flavoprotein; structura 46.3 13 0.00045 30.2 3.0 36 13-50 150-186 (417)
49 2vou_A 2,6-dihydroxypyridine h 45.9 19 0.00065 28.1 3.8 51 13-65 115-167 (397)
50 3dje_A Fructosyl amine: oxygen 43.6 18 0.00061 28.5 3.3 38 17-56 186-225 (438)
51 1y56_B Sarcosine oxidase; dehy 42.9 21 0.00071 27.3 3.5 35 14-50 168-204 (382)
52 3rp8_A Flavoprotein monooxygen 41.3 21 0.00073 27.8 3.4 35 14-49 144-179 (407)
53 2x3n_A Probable FAD-dependent 41.1 21 0.00072 27.7 3.3 43 13-56 126-172 (399)
54 3ayj_A Pro-enzyme of L-phenyla 39.6 24 0.00082 31.5 3.8 44 13-56 364-419 (721)
55 3uox_A Otemo; baeyer-villiger 38.6 18 0.00063 30.4 2.8 36 12-48 106-144 (545)
56 2q0l_A TRXR, thioredoxin reduc 38.5 30 0.001 25.5 3.7 36 9-47 74-110 (311)
57 2oln_A NIKD protein; flavoprot 36.5 24 0.00081 27.3 2.9 40 14-56 172-212 (397)
58 3klj_A NAD(FAD)-dependent dehy 34.6 32 0.0011 27.3 3.5 32 14-47 81-112 (385)
59 1w4x_A Phenylacetone monooxyge 31.2 40 0.0014 27.9 3.7 35 13-48 114-151 (542)
60 3ab1_A Ferredoxin--NADP reduct 30.7 43 0.0015 25.4 3.6 35 14-49 93-129 (360)
61 2i0z_A NAD(FAD)-utilizing dehy 30.6 43 0.0015 26.9 3.7 34 14-48 153-188 (447)
62 3d1c_A Flavin-containing putat 29.7 37 0.0013 25.6 3.0 39 9-48 230-269 (369)
63 1d5t_A Guanine nucleotide diss 29.2 34 0.0012 27.5 2.8 59 12-75 251-311 (433)
64 2gqf_A Hypothetical protein HI 28.3 41 0.0014 26.9 3.1 32 14-47 128-164 (401)
65 2cul_A Glucose-inhibited divis 28.3 76 0.0026 22.8 4.4 38 9-49 84-123 (232)
66 3ntd_A FAD-dependent pyridine 27.6 43 0.0015 27.4 3.2 34 14-47 77-113 (565)
67 3o0h_A Glutathione reductase; 26.9 58 0.002 26.3 3.8 35 14-49 251-286 (484)
68 2v3a_A Rubredoxin reductase; a 25.7 53 0.0018 25.5 3.3 35 14-49 206-241 (384)
69 3itj_A Thioredoxin reductase 1 25.7 60 0.0021 23.8 3.5 37 9-47 99-138 (338)
70 2gag_B Heterotetrameric sarcos 25.6 61 0.0021 24.7 3.6 34 14-49 193-228 (405)
71 2e1m_B L-glutamate oxidase; L- 24.8 38 0.0013 23.7 2.1 37 39-75 7-57 (130)
72 1fl2_A Alkyl hydroperoxide red 24.2 63 0.0022 23.6 3.3 33 14-47 75-111 (310)
73 3s5w_A L-ornithine 5-monooxyge 24.1 48 0.0016 26.2 2.8 36 13-48 145-189 (463)
74 3cty_A Thioredoxin reductase; 23.8 81 0.0028 23.3 3.9 31 16-47 92-122 (319)
75 3iwa_A FAD-dependent pyridine 23.6 59 0.002 26.1 3.3 34 14-47 85-121 (472)
76 3oc4_A Oxidoreductase, pyridin 22.3 55 0.0019 26.1 2.9 34 14-47 77-111 (452)
77 1xdi_A RV3303C-LPDA; reductase 22.3 78 0.0027 25.6 3.8 34 14-48 242-276 (499)
78 2yqu_A 2-oxoglutarate dehydrog 21.5 79 0.0027 25.1 3.6 38 9-48 223-261 (455)
79 3axb_A Putative oxidoreductase 20.5 1.5E+02 0.0052 23.1 5.1 57 14-72 200-279 (448)
80 3r9u_A Thioredoxin reductase; 20.3 63 0.0022 23.5 2.6 34 9-47 77-114 (315)
81 3ego_A Probable 2-dehydropanto 20.0 74 0.0025 24.3 3.1 21 36-56 64-84 (307)
No 1
>3qj4_A Renalase; FAD/NAD(P)-binding rossmann fold superfamily, flavin contain oxidoreductase, monoamine oxidase, NAD, extracellular, oxidoreductase; HET: FAD; 2.50A {Homo sapiens}
Probab=99.70 E-value=2.5e-17 Score=130.14 Aligned_cols=108 Identities=15% Similarity=0.199 Sum_probs=88.1
Q ss_pred ecCCceEEEEEecCCceEEe-cCCCccCCCcEEEEccChHhHHHHH----------------hccccceeeeeeeccCC-
Q 044014 12 IPSNETLLDLEPFNRMWHLS-ENGESCGQFDVIIIARNGKCANRLL----------------RMQLSSIWTLLAASEDP- 73 (127)
Q Consensus 12 ~~~~t~V~~l~~~~~~W~L~-~~g~~~G~FD~VVvA~Pa~QA~~Ll----------------~~~~~pcWalm~af~~p- 73 (127)
|=.+++|.++++++++|.+. ++|+. -.||.||+|+|++|+.+|| .++|.|||++|++|+++
T Consensus 126 i~~~~~V~~i~~~~~~~~v~~~~g~~-~~ad~vV~A~p~~~~~~ll~~~~~~l~~~~~~~l~~~~~~~~~~v~l~~~~~~ 204 (342)
T 3qj4_A 126 VYFRHRVTQINLRDDKWEVSKQTGSP-EQFDLIVLTMPVPEILQLQGDITTLISECQRQQLEAVSYSSRYALGLFYEAGT 204 (342)
T ss_dssp EESSCCEEEEEECSSSEEEEESSSCC-EEESEEEECSCHHHHTTCBSTHHHHSCHHHHHHHHTCCBCCEEEEEEECSSCC
T ss_pred EEeCCEEEEEEEcCCEEEEEECCCCE-EEcCEEEECCCHHHHHHHhcccccccCHHHHHHHhcCCccccEEEEEEECCCC
Confidence 45789999999999999998 66654 3789999999999987776 45789999999999975
Q ss_pred -CCCCCcccccccccc---ceeEEEeCCCCCCCCCCCCCcEEEEEeChhhhhhcC
Q 044014 74 -RLLGSAASFKAPLLK---AVSWMADNPGKLFRSQSDVPHCWTFFSTAAYGKRKK 124 (127)
Q Consensus 74 -l~~~~~~~~dga~v~---~LsWiarnssKPGR~~r~~~e~WVlhAt~~wS~~Hk 124 (127)
++.+ ++|.++. .+.|+++||+||||....+.++||+|++.+|+++|.
T Consensus 205 ~~~~~----~~g~~~~~~~~~~~~~~~~~k~~r~~~~~~~~~v~~~~~~~~~~~~ 255 (342)
T 3qj4_A 205 KIDVP----WAGQYITSNPCIRFVSIDNKKRNIESSEIGPSLVIHTTVPFGVTYL 255 (342)
T ss_dssp --CCS----CSEEECSSCSSEEEEEEHHHHTTCCCC-CCCEEEEEECHHHHHHTT
T ss_pred ccCCc----eeeEEccCCcceEEEEccccCCCCCCCCCCceEEEECCHHHHHHhh
Confidence 5556 8887765 599999999999954222456999999999998875
No 2
>1yvv_A Amine oxidase, flavin-containing; oxidoreductase, PSR10, Q888A4, X-RAY, structure, PSI, protein structure initiative; HET: FAD; 2.50A {Pseudomonas syringae} PDB: 3kkj_A*
Probab=99.46 E-value=3.1e-13 Score=104.94 Aligned_cols=105 Identities=22% Similarity=0.431 Sum_probs=89.6
Q ss_pred cCCceEEEEEecCCceEEe-cCCCccCCCcEEEEccChHhHHHHH-----------hccccceeeeeeeccCCCCCCCcc
Q 044014 13 PSNETLLDLEPFNRMWHLS-ENGESCGQFDVIIIARNGKCANRLL-----------RMQLSSIWTLLAASEDPRLLGSAA 80 (127)
Q Consensus 13 ~~~t~V~~l~~~~~~W~L~-~~g~~~G~FD~VVvA~Pa~QA~~Ll-----------~~~~~pcWalm~af~~pl~~~~~~ 80 (127)
=.+++|.++++++++|.+. .+|+....+|.||+|+|+.++.+++ ...+.+||++|+.|+++...+
T Consensus 123 ~~~~~v~~i~~~~~~~~v~~~~g~~~~~a~~vV~a~g~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~--- 199 (336)
T 1yvv_A 123 SFSCRITEVFRGEEHWNLLDAEGQNHGPFSHVIIATPAPQASTLLAAAPKLASVVAGVKMDPTWAVALAFETPLQTP--- 199 (336)
T ss_dssp ECSCCEEEEEECSSCEEEEETTSCEEEEESEEEECSCHHHHGGGGTTCHHHHHHHTTCCEEEEEEEEEEESSCCSCC---
T ss_pred EecCEEEEEEEeCCEEEEEeCCCcCccccCEEEEcCCHHHHHHhhccCHHHHHHHhhcCccceeEEEEEecCCCCCC---
Confidence 4789999999999999998 7776666689999999999998876 456889999999999998776
Q ss_pred cccccccc--ceeEEEeCCCCCCCCCCCCC-cEEEEEeChhhhhhcC
Q 044014 81 SFKAPLLK--AVSWMADNPGKLFRSQSDVP-HCWTFFSTAAYGKRKK 124 (127)
Q Consensus 81 ~~dga~v~--~LsWiarnssKPGR~~r~~~-e~WVlhAt~~wS~~Hk 124 (127)
+++.|+. ++.|+..+++||+| ++. .+||++++++|++++.
T Consensus 200 -~~~~~~~~~~~~~l~~~~~~p~~---~~~~~~~v~~~~~~~~~~~~ 242 (336)
T 1yvv_A 200 -MQGCFVQDSPLDWLARNRSKPER---DDTLDTWILHATSQWSRQNL 242 (336)
T ss_dssp -CCEEEECSSSEEEEEEGGGSTTC---CCSSEEEEEEECHHHHHHTT
T ss_pred -CCeEEeCCCceeEEEecCcCCCC---CCCCcEEEEEeCHHHHHHHH
Confidence 6777766 89999999999993 343 7999999999998764
No 3
>3nks_A Protoporphyrinogen oxidase; FAD containing protein, PPO, variegate porphyria disease, VP oxidoreductase-oxidoreductase inhibitor complex; HET: ACJ FAD; 1.90A {Homo sapiens}
Probab=98.35 E-value=8.2e-07 Score=72.21 Aligned_cols=108 Identities=14% Similarity=0.079 Sum_probs=75.8
Q ss_pred ecCCceEEEEEecCCc-eEEecCCCccCCCcEEEEccChHhHHHHH------------hccccceeeeeeeccCCCCCCC
Q 044014 12 IPSNETLLDLEPFNRM-WHLSENGESCGQFDVIIIARNGKCANRLL------------RMQLSSIWTLLAASEDPRLLGS 78 (127)
Q Consensus 12 ~~~~t~V~~l~~~~~~-W~L~~~g~~~G~FD~VVvA~Pa~QA~~Ll------------~~~~~pcWalm~af~~pl~~~~ 78 (127)
|=.+|+|.+|++++++ |.+..+|+ .-.+|.||+|+|+.++.+|+ .+.+.|++.+++.|+++.-..
T Consensus 251 i~~~~~V~~i~~~~~~~~~v~~~~~-~~~ad~vv~a~p~~~~~~ll~~~~~~~~~~l~~~~~~~~~~v~l~~~~~~~~~- 328 (477)
T 3nks_A 251 VLRGQPVCGLSLQAEGRWKVSLRDS-SLEADHVISAIPASVLSELLPAEAAPLARALSAITAVSVAVVNLQYQGAHLPV- 328 (477)
T ss_dssp EECSCCCCEEEECGGGCEEEECSSC-EEEESEEEECSCHHHHHHHSCGGGHHHHHHHHTCCEEEEEEEEEEETTCCCSS-
T ss_pred EEeCCEEEEEEEcCCceEEEEECCe-EEEcCEEEECCCHHHHHHhccccCHHHHHHHhcCCCCcEEEEEEEECCCCCCC-
Confidence 4578999999998877 99984343 24689999999999999987 357889999999999875311
Q ss_pred cccccccccc------ceeEEEeCCCCCCCCCCCCCcEEEEEeChhhhhhc
Q 044014 79 AASFKAPLLK------AVSWMADNPGKLFRSQSDVPHCWTFFSTAAYGKRK 123 (127)
Q Consensus 79 ~~~~dga~v~------~LsWiarnssKPGR~~r~~~e~WVlhAt~~wS~~H 123 (127)
..| |..+. .+.|+-.++..|++.+..+...++++...+|+.++
T Consensus 329 -~~~-g~l~~~~~~~~~~~~~~~s~~~~~~~~~~~~~~l~~~~gg~~~~~~ 377 (477)
T 3nks_A 329 -QGF-GHLVPSSEDPGVLGIVYDSVAFPEQDGSPPGLRVTVMLGGSWLQTL 377 (477)
T ss_dssp -CSS-EEECCTTTCSSEEEEECHHHHCGGGSTTTTCEEEEEEECHHHHHHH
T ss_pred -CCc-eEEccCCCCCCceEEEEeccccCCCCCCCCceEEEEEECCcccccc
Confidence 013 33331 57886655555764322234567788888887654
No 4
>3lov_A Protoporphyrinogen oxidase; structural genomics, JO center for structural genomics, JCSG, protein structure INI PSI-2; HET: FAD; 2.06A {Exiguobacterium sibiricum}
Probab=97.86 E-value=2.3e-05 Score=63.84 Aligned_cols=64 Identities=17% Similarity=0.189 Sum_probs=54.4
Q ss_pred ecCCceEEEEEecCCceEEe-cCCCccCCCcEEEEccChHhHHHHH---------hccccceeeeeeeccCCCCCC
Q 044014 12 IPSNETLLDLEPFNRMWHLS-ENGESCGQFDVIIIARNGKCANRLL---------RMQLSSIWTLLAASEDPRLLG 77 (127)
Q Consensus 12 ~~~~t~V~~l~~~~~~W~L~-~~g~~~G~FD~VVvA~Pa~QA~~Ll---------~~~~~pcWalm~af~~pl~~~ 77 (127)
|=.+|+|.+|++.+++|.+. .+| .-.+|.||+|+|+.++.+|+ ...+.|++.+++.|++|.+.+
T Consensus 251 i~~~~~V~~i~~~~~~~~v~~~~g--~~~ad~vV~a~p~~~~~~ll~~~~~~~~~~~~~~~~~~v~l~~~~~~~~~ 324 (475)
T 3lov_A 251 IRLETPLLAISREDGRYRLKTDHG--PEYADYVLLTIPHPQVVQLLPDAHLPELEQLTTHSTATVTMIFDQQQSLP 324 (475)
T ss_dssp EESSCCCCEEEEETTEEEEECTTC--CEEESEEEECSCHHHHHHHCTTSCCHHHHTCCEEEEEEEEEEEECCSSCS
T ss_pred EEcCCeeeEEEEeCCEEEEEECCC--eEECCEEEECCCHHHHHHHcCccCHHHHhcCCCCeEEEEEEEECCcCCCC
Confidence 45889999999999999998 666 45689999999999999987 256889999999999987433
No 5
>3i6d_A Protoporphyrinogen oxidase; protein-inhibitor complex, cytoplasm, FAD, flavoprotein, oxidoreductase, porphyrin biosynthesis; HET: FAD ACJ; 2.90A {Bacillus subtilis}
Probab=97.75 E-value=5.1e-05 Score=60.89 Aligned_cols=62 Identities=18% Similarity=0.239 Sum_probs=53.4
Q ss_pred ecCCceEEEEEecCCceEEe-cCCCccCCCcEEEEccChHhHHHHH----------hccccceeeeeeeccCCC
Q 044014 12 IPSNETLLDLEPFNRMWHLS-ENGESCGQFDVIIIARNGKCANRLL----------RMQLSSIWTLLAASEDPR 74 (127)
Q Consensus 12 ~~~~t~V~~l~~~~~~W~L~-~~g~~~G~FD~VVvA~Pa~QA~~Ll----------~~~~~pcWalm~af~~pl 74 (127)
|=.+++|.+|++++++|.+. .+|+. -.+|.||+|+|+.++.+|+ ...+.+++.+++.|++|.
T Consensus 250 i~~~~~V~~i~~~~~~~~v~~~~g~~-~~ad~vi~a~p~~~~~~l~~~~~~~~~~~~~~~~~~~~v~l~~~~~~ 322 (470)
T 3i6d_A 250 VYKGTKVTKLSHSGSCYSLELDNGVT-LDADSVIVTAPHKAAAGMLSELPAISHLKNMHSTSVANVALGFPEGS 322 (470)
T ss_dssp EECSCCEEEEEECSSSEEEEESSSCE-EEESEEEECSCHHHHHHHTTTSTTHHHHHTCEEEEEEEEEEEESSTT
T ss_pred EEeCCceEEEEEcCCeEEEEECCCCE-EECCEEEECCCHHHHHHHcCCchhhHHHhcCCCCceEEEEEEECchh
Confidence 55899999999999999998 66643 4579999999999999987 346889999999999875
No 6
>2ivd_A PPO, PPOX, protoporphyrinogen oxidase; porphyrin biosynthesis, chlorophyll biosynthesis, oxidoreductase, HAEM biosynthesis, heme biosynthesis; HET: ACJ FAD TWN; 2.3A {Myxococcus xanthus} SCOP: c.3.1.2 d.16.1.5 PDB: 2ive_A*
Probab=97.60 E-value=0.00011 Score=59.75 Aligned_cols=105 Identities=10% Similarity=0.060 Sum_probs=67.9
Q ss_pred ecCCceEEEEEecCCceEEec----CCCccCCCcEEEEccChHhHHHHH------------hccccceeeeeeeccCCC-
Q 044014 12 IPSNETLLDLEPFNRMWHLSE----NGESCGQFDVIIIARNGKCANRLL------------RMQLSSIWTLLAASEDPR- 74 (127)
Q Consensus 12 ~~~~t~V~~l~~~~~~W~L~~----~g~~~G~FD~VVvA~Pa~QA~~Ll------------~~~~~pcWalm~af~~pl- 74 (127)
|=.+++|.++++.+++|.+.. +|+ .-.+|.||+|+|+.++.+|+ ...+.+++.++++|+++.
T Consensus 252 i~~~~~V~~i~~~~~~~~v~~~~~~~g~-~~~ad~vV~a~~~~~~~~ll~~l~~~~~~~l~~~~~~~~~~v~l~~~~~~~ 330 (478)
T 2ivd_A 252 AHVGARVEGLAREDGGWRLIIEEHGRRA-ELSVAQVVLAAPAHATAKLLRPLDDALAALVAGIAYAPIAVVHLGFDAGTL 330 (478)
T ss_dssp EESSEEEEEEECC--CCEEEEEETTEEE-EEECSEEEECSCHHHHHHHHTTTCHHHHHHHHTCCBCCEEEEEEEECTTSS
T ss_pred EEcCCEEEEEEecCCeEEEEEeecCCCc-eEEcCEEEECCCHHHHHHHhhccCHHHHHHHhcCCCCcEEEEEEEEccccC
Confidence 457899999999988898872 443 34689999999999999887 345789999999999874
Q ss_pred CCCCccccccccc--c--ceeEEEeCCCC-CCCCCCCCCcEEEEEeChhhh
Q 044014 75 LLGSAASFKAPLL--K--AVSWMADNPGK-LFRSQSDVPHCWTFFSTAAYG 120 (127)
Q Consensus 75 ~~~~~~~~dga~v--~--~LsWiarnssK-PGR~~r~~~e~WVlhAt~~wS 120 (127)
+.+ ..+...+. . ++.++..+|++ |++. .++...++++.+..++
T Consensus 331 ~~~--~~~~~~~~~~~~~~~~~~~~~s~~~~~~~-p~g~~~l~~~~~~~~~ 378 (478)
T 2ivd_A 331 PAP--DGFGFLVPAEEQRRMLGAIHASTTFPFRA-EGGRVLYSCMVGGARQ 378 (478)
T ss_dssp CCC--CSSEEECCGGGCCSCCEEEEHHHHCGGGB-STTCEEEEEEEECTTC
T ss_pred CCC--CceEEEecCCCCCceEEEEEEcccCCCcC-CCCCEEEEEEeCCcCC
Confidence 321 11211111 1 45666666665 4421 1233467777665553
No 7
>2yg5_A Putrescine oxidase; oxidoreductase, flavin; HET: FAD; 1.90A {Rhodococcus erythropolis} PDB: 2yg6_A* 2yg3_A* 2yg4_A* 2yg7_A* 3rha_A*
Probab=97.11 E-value=0.0012 Score=53.32 Aligned_cols=101 Identities=13% Similarity=0.033 Sum_probs=67.7
Q ss_pred ecCCceEEEEEecCCc-eEEecCCCccCCCcEEEEccChHhHHHHH--------------hccccceeeeeeeccCCCCC
Q 044014 12 IPSNETLLDLEPFNRM-WHLSENGESCGQFDVIIIARNGKCANRLL--------------RMQLSSIWTLLAASEDPRLL 76 (127)
Q Consensus 12 ~~~~t~V~~l~~~~~~-W~L~~~g~~~G~FD~VVvA~Pa~QA~~Ll--------------~~~~~pcWalm~af~~pl~~ 76 (127)
|=.+++|.+++.++++ |.+..+|+.. .+|.||+|+|..++.+|+ +..+.++..+.+.|++|.-.
T Consensus 229 i~~~~~V~~i~~~~~~~v~v~~~~~~~-~ad~VI~a~p~~~~~~l~~~p~lp~~~~~~i~~~~~~~~~kv~l~~~~~~w~ 307 (453)
T 2yg5_A 229 VFLNAPVRTVKWNESGATVLADGDIRV-EASRVILAVPPNLYSRISYDPPLPRRQHQMHQHQSLGLVIKVHAVYETPFWR 307 (453)
T ss_dssp EECSCCEEEEEEETTEEEEEETTTEEE-EEEEEEECSCGGGGGGSEEESCCCHHHHHHGGGEEECCEEEEEEEESSCGGG
T ss_pred EEcCCceEEEEEeCCceEEEEECCeEE-EcCEEEEcCCHHHHhcCEeCCCCCHHHHHHHhcCCCcceEEEEEEECCCCCC
Confidence 4478999999999888 9988545333 479999999999877764 33567889999999987421
Q ss_pred CCcccccccccc---ceeEEEeCCCCCCCCCCCCCcEEEEEeChhhh
Q 044014 77 GSAASFKAPLLK---AVSWMADNPGKLFRSQSDVPHCWTFFSTAAYG 120 (127)
Q Consensus 77 ~~~~~~dga~v~---~LsWiarnssKPGR~~r~~~e~WVlhAt~~wS 120 (127)
. ..+.|..+. ++.++..++ +|. . +...++.+...+++
T Consensus 308 ~--~~~~g~~~~~~~~~~~~~~~~-~~~---~-~~~~l~~~~~~~~~ 347 (453)
T 2yg5_A 308 E--DGLSGTGFGASEVVQEVYDNT-NHE---D-DRGTLVAFVSDEKA 347 (453)
T ss_dssp G--GTEEEEEECTTSSSCEEEECC-CTT---C-SSEEEEEEEEHHHH
T ss_pred C--CCCCceeecCCCCeEEEEeCC-CCC---C-CCCEEEEEeccHHH
Confidence 1 013343332 677776555 554 1 12367777665544
No 8
>2vvm_A Monoamine oxidase N; FAD, peroxisome, flavoprotein, oxidoreductase, enantioselectivity, directed evolution variant; HET: FAD; 1.85A {Aspergillus niger} PDB: 2vvl_A* 2vvl_G*
Probab=96.47 E-value=0.0022 Score=52.42 Aligned_cols=85 Identities=4% Similarity=-0.051 Sum_probs=62.3
Q ss_pred ecCCceEEEEEecCCceEEe-cCCCccCCCcEEEEccChHhHHHHH--------------hccccceeeeeeeccCCCCC
Q 044014 12 IPSNETLLDLEPFNRMWHLS-ENGESCGQFDVIIIARNGKCANRLL--------------RMQLSSIWTLLAASEDPRLL 76 (127)
Q Consensus 12 ~~~~t~V~~l~~~~~~W~L~-~~g~~~G~FD~VVvA~Pa~QA~~Ll--------------~~~~~pcWalm~af~~pl~~ 76 (127)
|=.+++|.+++..++++.+. .+|+. -.+|.||+|+|..++.+|+ ...+.++..+.+.|+++...
T Consensus 273 i~~~~~V~~i~~~~~~v~v~~~~g~~-~~ad~vI~a~~~~~l~~i~~~p~lp~~~~~ai~~~~~~~~~kv~l~~~~~~~~ 351 (495)
T 2vvm_A 273 YVFGCPVRSVVNERDAARVTARDGRE-FVAKRVVCTIPLNVLSTIQFSPALSTERISAMQAGHVSMCTKVHAEVDNKDMR 351 (495)
T ss_dssp EESSCCEEEEEECSSSEEEEETTCCE-EEEEEEEECCCGGGGGGSEEESCCCHHHHHHHHHCCCCCCEEEEEEESCGGGG
T ss_pred EEeCCEEEEEEEcCCEEEEEECCCCE-EEcCEEEECCCHHHHhheeeCCCCCHHHHHHHHhcCCCceeEEEEEECCccCC
Confidence 45789999999998899997 66643 3579999999999887764 34567899999999987532
Q ss_pred CCcccccccccc--ceeEEEeCCCCCC
Q 044014 77 GSAASFKAPLLK--AVSWMADNPGKLF 101 (127)
Q Consensus 77 ~~~~~~dga~v~--~LsWiarnssKPG 101 (127)
+ +.|.... ++.++..++..|+
T Consensus 352 ~----~~g~~~~~~~~~~~~~~~~~~~ 374 (495)
T 2vvm_A 352 S----WTGIAYPFNKLCYAIGDGTTPA 374 (495)
T ss_dssp G----EEEEECSSCSSCEEEEEEECTT
T ss_pred C----ceeEecCCCCcEEEecCCCCCC
Confidence 3 4443222 6777777766665
No 9
>3ka7_A Oxidoreductase; structural genomics, PSI-2, protein structure initiative, northeast structural genomics consortium, NESG; HET: FAD; 1.80A {Methanosarcina mazei}
Probab=96.40 E-value=0.018 Score=45.59 Aligned_cols=101 Identities=13% Similarity=0.035 Sum_probs=64.9
Q ss_pred ecCCceEEEEEecCCceE-EecCCCccCCCcEEEEccChHhHHHHHh-----------------ccccceeeeeeeccCC
Q 044014 12 IPSNETLLDLEPFNRMWH-LSENGESCGQFDVIIIARNGKCANRLLR-----------------MQLSSIWTLLAASEDP 73 (127)
Q Consensus 12 ~~~~t~V~~l~~~~~~W~-L~~~g~~~G~FD~VVvA~Pa~QA~~Ll~-----------------~~~~pcWalm~af~~p 73 (127)
|=.+++|.+|+.++++|. +..+|+.. .+|.||+|+|+..+.+||. ....+...+.++|+++
T Consensus 213 i~~~~~V~~i~~~~~~~~gv~~~g~~~-~ad~VV~a~~~~~~~~ll~~~~~~~~~~~~~~~~~~~~~~~~~~v~l~~~~~ 291 (425)
T 3ka7_A 213 IHTGQEVSKILIENGKAAGIIADDRIH-DADLVISNLGHAATAVLCSEALSKEADAAYFKMVGTLQPSAGIKICLAADEP 291 (425)
T ss_dssp EECSCCEEEEEEETTEEEEEEETTEEE-ECSEEEECSCHHHHHHHTTTTCCTTTTHHHHHHHHHCCCBEEEEEEEEESSC
T ss_pred EEECCceeEEEEECCEEEEEEECCEEE-ECCEEEECCCHHHHHHhcCCcccccCCHHHHHHhhCcCCCceEEEEeecCCC
Confidence 457899999999998887 65445443 4699999999999998882 1245677788899887
Q ss_pred CCCCCcccccccccc----ceeEEEeCCCC-CCCCCCCCCcEEEEEeChhh
Q 044014 74 RLLGSAASFKAPLLK----AVSWMADNPGK-LFRSQSDVPHCWTFFSTAAY 119 (127)
Q Consensus 74 l~~~~~~~~dga~v~----~LsWiarnssK-PGR~~r~~~e~WVlhAt~~w 119 (127)
+.. ..+.++. .+..+...|.+ |++. ..+.....++....|
T Consensus 292 ~~~-----~~~~~~~~~~~~~~~~~~~s~~~p~~a-p~G~~~l~~~~~~~~ 336 (425)
T 3ka7_A 292 LVG-----HTGVLLTPYTRRINGVNEVTQADPELA-PPGKHLTMCHQYVAP 336 (425)
T ss_dssp SSC-----SSSEEECCSSSSEEEEECGGGTCGGGS-CTTCEEEEEEEEECG
T ss_pred ccC-----cCEEEECCChhhcceEEeccCCCCCcC-CCCCeEEEEEecccc
Confidence 542 2333332 35566655554 5543 223344444554444
No 10
>4dsg_A UDP-galactopyranose mutase; rossmann fold, flavin adenine dinucleotide, isomerase; HET: FAD UDP; 2.25A {Trypanosoma cruzi} PDB: 4dsh_A*
Probab=96.03 E-value=0.018 Score=47.92 Aligned_cols=61 Identities=16% Similarity=0.142 Sum_probs=47.9
Q ss_pred ecCC--ceEEEEEecCCceEEecCCCccCCCcEEEEccChHhHHHHH----------------hccccceeeeeeeccCC
Q 044014 12 IPSN--ETLLDLEPFNRMWHLSENGESCGQFDVIIIARNGKCANRLL----------------RMQLSSIWTLLAASEDP 73 (127)
Q Consensus 12 ~~~~--t~V~~l~~~~~~W~L~~~g~~~G~FD~VVvA~Pa~QA~~Ll----------------~~~~~pcWalm~af~~p 73 (127)
|-.+ ++|.+|++++++|.+ .+|+ .-.||.||+|+|++++.+|+ ...+.++-.+.++|+.+
T Consensus 231 i~~~~~~~V~~I~~~~~~v~~-~~G~-~~~ad~VI~a~p~~~~~~ll~~~~~~~~~~~~~~l~~l~y~s~~~v~l~~~~~ 308 (484)
T 4dsg_A 231 LTFNSGFQAIAIDADAKTITF-SNGE-VVSYDYLISTVPFDNLLRMTKGTGFKGYDEWPAIADKMVYSSTNVIGIGVKGT 308 (484)
T ss_dssp EEECGGGCEEEEETTTTEEEE-TTSC-EEECSEEEECSCHHHHHHHEECSSCTTGGGHHHHHHHCCEEEEEEEEEEEESC
T ss_pred EEECCCceeEEEEecCCEEEE-CCCC-EEECCEEEECCCHHHHHHHhhccCCCCCHHHHHHHhCCCcCceEEEEEEEcCC
Confidence 3356 569999999988876 3443 24589999999999999886 34578999999999987
Q ss_pred C
Q 044014 74 R 74 (127)
Q Consensus 74 l 74 (127)
.
T Consensus 309 ~ 309 (484)
T 4dsg_A 309 P 309 (484)
T ss_dssp C
T ss_pred C
Confidence 4
No 11
>1s3e_A Amine oxidase [flavin-containing] B; human monoamine oxidase, inhibitor binding, rasagiline, enantioselectivity, oxidoreductase; HET: FAD RHP; 1.60A {Homo sapiens} SCOP: c.3.1.2 d.16.1.5 PDB: 1gos_A* 1oj9_A* 1ojb_A* 1ojc_A* 1ojd_A* 1s2q_A* 1s2y_A* 1oja_A* 1s3b_A* 2bk3_A* 2byb_A* 2c64_A* 2c65_A* 2c66_A* 2c67_A* 2c70_A* 2v5z_A* 2v60_A* 2v61_A* 2vrl_A* ...
Probab=96.02 E-value=0.0063 Score=50.34 Aligned_cols=62 Identities=13% Similarity=0.141 Sum_probs=50.0
Q ss_pred ecCCceEEEEEecCCceEEe-cCCCccCCCcEEEEccChHhHHHHH--------------hccccceeeeeeeccCCC
Q 044014 12 IPSNETLLDLEPFNRMWHLS-ENGESCGQFDVIIIARNGKCANRLL--------------RMQLSSIWTLLAASEDPR 74 (127)
Q Consensus 12 ~~~~t~V~~l~~~~~~W~L~-~~g~~~G~FD~VVvA~Pa~QA~~Ll--------------~~~~~pcWalm~af~~pl 74 (127)
|=.+++|.+++.++++|.+. .+|+.. .+|.||+|+|..++.+|+ +..+.++-.+.+.|+++.
T Consensus 229 i~~~~~V~~i~~~~~~v~v~~~~g~~~-~ad~VI~a~p~~~l~~l~~~p~lp~~~~~~i~~~~~~~~~kv~l~~~~~~ 305 (520)
T 1s3e_A 229 VKLERPVIYIDQTRENVLVETLNHEMY-EAKYVISAIPPTLGMKIHFNPPLPMMRNQMITRVPLGSVIKCIVYYKEPF 305 (520)
T ss_dssp EESSCCEEEEECSSSSEEEEETTSCEE-EESEEEECSCGGGGGGSEEESCCCHHHHHHTTSCCBCCEEEEEEECSSCG
T ss_pred EEcCCeeEEEEECCCeEEEEECCCeEE-EeCEEEECCCHHHHcceeeCCCCCHHHHHHHHhCCCcceEEEEEEeCCCc
Confidence 45789999999999999997 666544 579999999999987764 345667778999999885
No 12
>3nrn_A Uncharacterized protein PF1083; alpha-beta protein, structural genomics, PSI-2, protein STRU initiative; HET: AMP; 2.10A {Pyrococcus furiosus}
Probab=96.01 E-value=0.016 Score=46.34 Aligned_cols=60 Identities=15% Similarity=0.149 Sum_probs=47.9
Q ss_pred ecCCceEEEEEecCCceEEecCCCccCCCcEEEEccChHhHHHHHh--------------ccccceeeeeeeccCC
Q 044014 12 IPSNETLLDLEPFNRMWHLSENGESCGQFDVIIIARNGKCANRLLR--------------MQLSSIWTLLAASEDP 73 (127)
Q Consensus 12 ~~~~t~V~~l~~~~~~W~L~~~g~~~G~FD~VVvA~Pa~QA~~Ll~--------------~~~~pcWalm~af~~p 73 (127)
|=.+++|.+|+.++++| +..+|+. -.+|.||+|+|+.++.+|+. .+..++..+.++|+++
T Consensus 206 i~~~~~V~~i~~~~~~v-V~~~g~~-~~ad~Vv~a~~~~~~~~ll~~~~~~~~~~~~~~~~~~~~~~~v~l~~~~~ 279 (421)
T 3nrn_A 206 ILTRKEVVEINIEEKKV-YTRDNEE-YSFDVAISNVGVRETVKLIGRDYFDRDYLKQVDSIEPSEGIKFNLAVPGE 279 (421)
T ss_dssp EESSCCEEEEETTTTEE-EETTCCE-EECSEEEECSCHHHHHHHHCGGGSCHHHHHHHHTCCCCCEEEEEEEEESS
T ss_pred EEcCCeEEEEEEECCEE-EEeCCcE-EEeCEEEECCCHHHHHHhcCcccCCHHHHHHHhCCCCCceEEEEEEEcCC
Confidence 45789999999999999 7755543 34799999999999999882 2345788888999887
No 13
>2jae_A L-amino acid oxidase; oxidoreductase, dimerisation mode, hydride transfer mechanism, GR2-family, flavoenzyme, FAD containing; HET: FAD; 1.25A {Rhodococcus opacus} PDB: 2jb1_A* 2jb2_A* 2jb3_A*
Probab=95.99 E-value=0.0062 Score=49.70 Aligned_cols=88 Identities=11% Similarity=-0.056 Sum_probs=59.9
Q ss_pred ecCCceEEEEEecCCceEEe-cCCC--ccCCCcEEEEccChHhHHHHH------------hccccceeeeeeeccCCCCC
Q 044014 12 IPSNETLLDLEPFNRMWHLS-ENGE--SCGQFDVIIIARNGKCANRLL------------RMQLSSIWTLLAASEDPRLL 76 (127)
Q Consensus 12 ~~~~t~V~~l~~~~~~W~L~-~~g~--~~G~FD~VVvA~Pa~QA~~Ll------------~~~~~pcWalm~af~~pl~~ 76 (127)
|=.+++|.++++.+++|.+. .+|. ..-.||.||+|+|..+...|+ +..+.++..+.+.|+++.-.
T Consensus 254 i~~~~~V~~i~~~~~~v~v~~~~g~~~~~~~ad~vI~a~p~~~l~~l~~~l~~~~~~~l~~~~~~~~~kv~l~~~~~~w~ 333 (489)
T 2jae_A 254 IVFGAEVTSMKNVSEGVTVEYTAGGSKKSITADYAICTIPPHLVGRLQNNLPGDVLTALKAAKPSSSGKLGIEYSRRWWE 333 (489)
T ss_dssp EETTCEEEEEEEETTEEEEEEEETTEEEEEEESEEEECSCHHHHTTSEECCCHHHHHHHHTEECCCEEEEEEEESSCHHH
T ss_pred EEECCEEEEEEEcCCeEEEEEecCCeEEEEECCEEEECCCHHHHHhCccCCCHHHHHHHHhCCCccceEEEEEeCCCCcc
Confidence 44789999999999999997 5442 234689999999998766554 45678999999999987411
Q ss_pred CCcccccc-cccc--ceeEEEeCCCCC
Q 044014 77 GSAASFKA-PLLK--AVSWMADNPGKL 100 (127)
Q Consensus 77 ~~~~~~dg-a~v~--~LsWiarnssKP 100 (127)
. ...+.| .... ++..+..+|.+.
T Consensus 334 ~-~~~~~g~~~~~~~~~~~~~~~s~~~ 359 (489)
T 2jae_A 334 T-EDRIYGGASNTDKDISQIMFPYDHY 359 (489)
T ss_dssp H-TTCCCSCEEEESSTTCEEECCSSST
T ss_pred C-CCCcccccccCCCCceEEEeCCCCC
Confidence 0 000222 2122 667777666653
No 14
>2iid_A L-amino-acid oxidase; flavoenzyme, FAD binding domain, reaction mechanism, sustrat binding, oxidoreductase; HET: NAG FUC PHE FAD; 1.80A {Calloselasma rhodostoma} SCOP: c.3.1.2 d.16.1.5 PDB: 1f8s_A* 1f8r_A* 1reo_A* 1tdk_A* 1tdn_A* 1tdo_A* 3kve_A* 4e0v_A*
Probab=95.47 E-value=0.021 Score=46.65 Aligned_cols=63 Identities=8% Similarity=0.082 Sum_probs=49.3
Q ss_pred ecCCceEEEEEecCCceEEe-cCCCcc---CCCcEEEEccChHhHHHHH--------------hccccceeeeeeeccCC
Q 044014 12 IPSNETLLDLEPFNRMWHLS-ENGESC---GQFDVIIIARNGKCANRLL--------------RMQLSSIWTLLAASEDP 73 (127)
Q Consensus 12 ~~~~t~V~~l~~~~~~W~L~-~~g~~~---G~FD~VVvA~Pa~QA~~Ll--------------~~~~~pcWalm~af~~p 73 (127)
|=.+++|.+|++.+++|.+. .+|+.. -.+|.||+|+|...+.+|+ ...|.+.-.+.+.|+++
T Consensus 255 i~~~~~V~~I~~~~~~v~v~~~~~~~~~~~~~ad~vI~t~p~~~~~~i~f~p~Lp~~~~~ai~~l~~~~~~kv~l~~~~~ 334 (498)
T 2iid_A 255 VHFNAQVIKIQQNDQKVTVVYETLSKETPSVTADYVIVCTTSRAVRLIKFNPPLLPKKAHALRSVHYRSGTKIFLTCTTK 334 (498)
T ss_dssp EESSCEEEEEEECSSCEEEEEECSSSCCCEEEESEEEECSCHHHHTTSEEESCCCHHHHHHHHHCCEECEEEEEEEESSC
T ss_pred cccCCEEEEEEECCCeEEEEEecCCcccceEEeCEEEECCChHHHhheecCCCCCHHHHHHHHhCCCcceeEEEEEeCCC
Confidence 45789999999999999997 555432 2689999999998766553 44677888899999987
Q ss_pred C
Q 044014 74 R 74 (127)
Q Consensus 74 l 74 (127)
.
T Consensus 335 ~ 335 (498)
T 2iid_A 335 F 335 (498)
T ss_dssp G
T ss_pred C
Confidence 4
No 15
>1b37_A Protein (polyamine oxidase); flavin-dependent amine oxidase, oxidoreductase; HET: NAG FCA MAN FAD; 1.90A {Zea mays} SCOP: c.3.1.2 d.16.1.5 PDB: 1b5q_A* 1h81_A* 1h82_A* 1h83_A* 1h84_A* 1h86_A* 3kpf_A* 3ku9_A* 3l1r_A*
Probab=95.09 E-value=0.034 Score=45.35 Aligned_cols=62 Identities=6% Similarity=0.048 Sum_probs=49.0
Q ss_pred ecCCceEEEEEecCCceEEe-cCCCccCCCcEEEEccChHhHHHHH----------------hccccceeeeeeeccCCC
Q 044014 12 IPSNETLLDLEPFNRMWHLS-ENGESCGQFDVIIIARNGKCANRLL----------------RMQLSSIWTLLAASEDPR 74 (127)
Q Consensus 12 ~~~~t~V~~l~~~~~~W~L~-~~g~~~G~FD~VVvA~Pa~QA~~Ll----------------~~~~~pcWalm~af~~pl 74 (127)
|-.+++|.+++..++++.+. .+|+.. .+|.||+|+|..++.+++ ...+.+.--+.+.|++|.
T Consensus 231 i~~~~~V~~i~~~~~~v~v~~~~g~~~-~ad~vI~a~~~~~l~~~~~~~~p~Lp~~~~~ai~~~~~~~~~kv~l~~~~~~ 309 (472)
T 1b37_A 231 LQLNKVVREIKYSPGGVTVKTEDNSVY-SADYVMVSASLGVLQSDLIQFKPKLPTWKVRAIYQFDMAVYTKIFLKFPRKF 309 (472)
T ss_dssp EESSCCEEEEEECSSCEEEEETTSCEE-EESEEEECSCHHHHHTTSSEEESCCCHHHHHHHHHSEEECEEEEEEECSSCC
T ss_pred EEcCCEEEEEEEcCCcEEEEECCCCEE-EcCEEEEecCHHHhccCCeeECCCCCHHHHHHHHhcCCcceeEEEEECCCcC
Confidence 55789999999999999997 666543 479999999999987754 334567777889998864
No 16
>1sez_A Protoporphyrinogen oxidase, mitochondrial; FAD-binding, para-hydroxy-benzoate-hydroxylase fold (PHBH- fold), monotopic membrane-binding domain; HET: FAD OMN TON; 2.90A {Nicotiana tabacum} SCOP: c.3.1.2 d.16.1.5
Probab=93.74 E-value=0.086 Score=42.93 Aligned_cols=63 Identities=11% Similarity=0.190 Sum_probs=47.2
Q ss_pred ecCCceEEEEEecCCc------eEEe-c--CCC--ccCCCcEEEEccChHhHHHHH--------------hccccceeee
Q 044014 12 IPSNETLLDLEPFNRM------WHLS-E--NGE--SCGQFDVIIIARNGKCANRLL--------------RMQLSSIWTL 66 (127)
Q Consensus 12 ~~~~t~V~~l~~~~~~------W~L~-~--~g~--~~G~FD~VVvA~Pa~QA~~Ll--------------~~~~~pcWal 66 (127)
|=.+++|.+|+..+++ |.+. . +|+ ..-.+|.||+|+|...+.+|+ ...+.++-.+
T Consensus 258 i~~~~~V~~I~~~~~~~~~~~~~~v~~~~~~g~~~~~~~ad~VI~a~p~~~l~~ll~~~~~~~~~~~~l~~~~~~~~~~v 337 (504)
T 1sez_A 258 LRLNSRVLELSCSCTEDSAIDSWSIISASPHKRQSEEESFDAVIMTAPLCDVKSMKIAKRGNPFLLNFIPEVDYVPLSVV 337 (504)
T ss_dssp EETTCCEEEEEEECSSSSSSCEEEEEEBCSSSSCBCCCEESEEEECSCHHHHHTSEEESSSSBCCCTTSCCCCEEEEEEE
T ss_pred EEcCCeEEEEEecCCCCcccceEEEEEcCCCCccceeEECCEEEECCCHHHHHHHhhcccCCcccHHHHhcCCCCceEEE
Confidence 4578999999998887 9886 3 342 223589999999999999886 1223477888
Q ss_pred eeeccCCC
Q 044014 67 LAASEDPR 74 (127)
Q Consensus 67 m~af~~pl 74 (127)
.+.|+++.
T Consensus 338 ~l~~~~~~ 345 (504)
T 1sez_A 338 ITTFKREN 345 (504)
T ss_dssp EEEEEGGG
T ss_pred EEEEchhh
Confidence 88998763
No 17
>2b9w_A Putative aminooxidase; isomerase, conjugated linoleic acid, FAD; HET: FAD 12P; 1.95A {Propionibacterium acnes} PDB: 2b9x_A* 2b9y_A* 2ba9_A* 2bab_A* 2bac_A*
Probab=93.42 E-value=0.04 Score=43.83 Aligned_cols=42 Identities=10% Similarity=0.047 Sum_probs=34.8
Q ss_pred cCCceEEEEEecCCceEEe-cCCCccCCCcEEEEccChHhHHHHH
Q 044014 13 PSNETLLDLEPFNRMWHLS-ENGESCGQFDVIIIARNGKCANRLL 56 (127)
Q Consensus 13 ~~~t~V~~l~~~~~~W~L~-~~g~~~G~FD~VVvA~Pa~QA~~Ll 56 (127)
=.+++|.++++.+++|.+. .+|+ -.+|.||+|+|+.++.+++
T Consensus 221 ~~~~~V~~i~~~~~~v~v~~~~g~--~~ad~Vv~a~~~~~~~~~l 263 (424)
T 2b9w_A 221 ERNVDITRITREDGKVHIHTTDWD--RESDVLVLTVPLEKFLDYS 263 (424)
T ss_dssp BCSCCEEEEECCTTCEEEEESSCE--EEESEEEECSCHHHHTTSB
T ss_pred EcCCEEEEEEEECCEEEEEECCCe--EEcCEEEECCCHHHHhhcc
Confidence 4689999999998899987 6564 3689999999999876665
No 18
>4gut_A Lysine-specific histone demethylase 1B; histone demethylase; HET: FAD PGE; 2.00A {Homo sapiens} PDB: 4gur_A* 4gus_A* 4guu_A* 4fwe_A* 4fwf_A* 4fwj_A* 4gu1_A*
Probab=92.05 E-value=0.19 Score=44.98 Aligned_cols=62 Identities=5% Similarity=-0.065 Sum_probs=48.0
Q ss_pred ecCCceEEEEEecCCceEEe-cCCCccCCCcEEEEccChHhHHHHH----------------hccccceeeeeeeccCCC
Q 044014 12 IPSNETLLDLEPFNRMWHLS-ENGESCGQFDVIIIARNGKCANRLL----------------RMQLSSIWTLLAASEDPR 74 (127)
Q Consensus 12 ~~~~t~V~~l~~~~~~W~L~-~~g~~~G~FD~VVvA~Pa~QA~~Ll----------------~~~~~pcWalm~af~~pl 74 (127)
|=.+++|.+|+.+++++.+. .+|+. -.+|.||+|+|........ .+.+.+.--+.+.|++|.
T Consensus 546 I~l~t~V~~I~~~~~~v~V~~~~G~~-i~Ad~VIvA~P~~vL~~~~i~f~P~Lp~~~~~ai~~l~~g~~~KV~l~f~~~F 624 (776)
T 4gut_A 546 IQLKSPVQCIDYSGDEVQVTTTDGTG-YSAQKVLVTVPLALLQKGAIQFNPPLSEKKMKAINSLGAGIIEKIALQFPYRF 624 (776)
T ss_dssp EESSCCEEEEECSSSSEEEEETTCCE-EEESEEEECCCHHHHHTTCSEEESCCCHHHHHHHHHEEEECCEEEEEECSSCT
T ss_pred EEcCCeeEEEEEcCCEEEEEECCCcE-EEcCEEEECCCHHHHhhcccccCCCCCHHHHHHHHhCCCeeEEEEEEecCccc
Confidence 45789999999999999998 66643 3479999999998876411 334567778899999874
No 19
>4dgk_A Phytoene dehydrogenase; the FAD/NAD(P)-binding rossmann fold, oxidoreductase; 2.35A {Pantoea ananatis}
Probab=91.79 E-value=0.29 Score=39.70 Aligned_cols=63 Identities=13% Similarity=0.115 Sum_probs=39.6
Q ss_pred ecCCceEEEEEecCCceE-Ee-cCCCccCCCcEEEEccChHhHHHHH---------------hccc-cceeeeeeeccCC
Q 044014 12 IPSNETLLDLEPFNRMWH-LS-ENGESCGQFDVIIIARNGKCANRLL---------------RMQL-SSIWTLLAASEDP 73 (127)
Q Consensus 12 ~~~~t~V~~l~~~~~~W~-L~-~~g~~~G~FD~VVvA~Pa~QA~~Ll---------------~~~~-~pcWalm~af~~p 73 (127)
|=.+++|++|+.+++++. +. ++|+... +|+||++++++.+.+.| ..++ .++..+.++++.+
T Consensus 238 I~~~~~V~~I~~~~~~~~gV~~~~g~~~~-ad~VV~~a~~~~~~~~Ll~~~~~~~~~~~~~~~~~~~~s~~~~~~~l~~~ 316 (501)
T 4dgk_A 238 VVLNARVSHMETTGNKIEAVHLEDGRRFL-TQAVASNADVVHTYRDLLSQHPAAVKQSNKLQTKRMSNSLFVLYFGLNHH 316 (501)
T ss_dssp EECSCCEEEEEEETTEEEEEEETTSCEEE-CSCEEECCC---------------------------CCEEEEEEEEESSC
T ss_pred eeeecceeEEEeeCCeEEEEEecCCcEEE-cCEEEECCCHHHHHHHhccccccchhhhhhhhccccCCceeEEEecccCC
Confidence 557899999999999887 55 6776554 59999999998876544 1112 2567777788776
Q ss_pred CC
Q 044014 74 RL 75 (127)
Q Consensus 74 l~ 75 (127)
.+
T Consensus 317 ~~ 318 (501)
T 4dgk_A 317 HD 318 (501)
T ss_dssp CT
T ss_pred cc
Confidence 54
No 20
>3k7m_X 6-hydroxy-L-nicotine oxidase; enantiomeric substrates, flavoenzymes, nicotine degradation, oxidoreductase; HET: FAD GP7; 1.95A {Arthrobacter nicotinovorans} PDB: 3k7q_X* 3ng7_X* 3ngc_X* 3nh3_X* 3nho_X* 3nk0_X* 3nk1_X* 3nk2_X* 3nn0_X* 3nn6_X* 3k7t_A*
Probab=90.90 E-value=0.26 Score=39.01 Aligned_cols=62 Identities=11% Similarity=0.127 Sum_probs=45.1
Q ss_pred ecCCceEEEEEecCCceEEe-cCCCccCCCcEEEEccChHhHHHHH--------------hccccceeeeeeeccCCC
Q 044014 12 IPSNETLLDLEPFNRMWHLS-ENGESCGQFDVIIIARNGKCANRLL--------------RMQLSSIWTLLAASEDPR 74 (127)
Q Consensus 12 ~~~~t~V~~l~~~~~~W~L~-~~g~~~G~FD~VVvA~Pa~QA~~Ll--------------~~~~~pcWalm~af~~pl 74 (127)
|=.+++|.+++.+++++.+. .+|+. -.+|.||+|+|.+....+. ...+...--+.+.|+++.
T Consensus 220 i~~~~~V~~i~~~~~~v~v~~~~g~~-~~ad~vi~a~~~~~l~~i~~~p~l~~~~~~~~~~~~~~~~~kv~~~~~~~~ 296 (431)
T 3k7m_X 220 IRLQTVVTGIDQSGDVVNVTVKDGHA-FQAHSVIVATPMNTWRRIVFTPALPERRRSVIEEGHGGQGLKILIHVRGAE 296 (431)
T ss_dssp EESSCCEEEEECSSSSEEEEETTSCC-EEEEEEEECSCGGGGGGSEEESCCCHHHHHHHHHCCCCCEEEEEEEEESCC
T ss_pred eEeCCEEEEEEEcCCeEEEEECCCCE-EEeCEEEEecCcchHhheeeCCCCCHHHHHHHHhCCCcceEEEEEEECCCC
Confidence 45789999999999999987 66653 3569999999977655443 233555666777777764
No 21
>1rsg_A FMS1 protein; FAD binding motif, oxidoreductase; HET: FAD; 1.90A {Saccharomyces cerevisiae} PDB: 1z6l_A* 3bi2_A* 3bi4_A* 3bi5_A* 3bnm_B* 3bnu_B* 3cn8_B* 3cnd_B* 3cnp_B* 3cns_A* 3cnt_B* 1yy5_A* 1xpq_A*
Probab=90.82 E-value=0.41 Score=39.50 Aligned_cols=62 Identities=11% Similarity=0.154 Sum_probs=46.9
Q ss_pred ecCCceEEEEEec-CCceEEe-cCCCccCCCcEEEEccChHhHHHH----------H---------------hcccccee
Q 044014 12 IPSNETLLDLEPF-NRMWHLS-ENGESCGQFDVIIIARNGKCANRL----------L---------------RMQLSSIW 64 (127)
Q Consensus 12 ~~~~t~V~~l~~~-~~~W~L~-~~g~~~G~FD~VVvA~Pa~QA~~L----------l---------------~~~~~pcW 64 (127)
|=.+++|.+|+.. ++++.+. .+|+.. .+|.||+|+|....... + ++.|.+.-
T Consensus 217 i~~~~~V~~I~~~~~~~v~v~~~~g~~~-~ad~VI~t~p~~~l~~~~~~~~~~~~~i~f~P~Lp~~~~~ai~~~~~~~~~ 295 (516)
T 1rsg_A 217 LKLSCEVKSITREPSKNVTVNCEDGTVY-NADYVIITVPQSVLNLSVQPEKNLRGRIEFQPPLKPVIQDAFDKIHFGALG 295 (516)
T ss_dssp EETTCCEEEEEECTTSCEEEEETTSCEE-EEEEEEECCCHHHHHGGGSSCSCSTTCCEEESCCCHHHHHHTTSSCCCCCE
T ss_pred EEECCEEEEEEEcCCCeEEEEECCCcEE-ECCEEEECCCHHHhhhccccccccccceEecCCCCHHHHHHHHhCCCCcce
Confidence 5578999999986 6789997 666433 57999999999887532 1 34566777
Q ss_pred eeeeeccCCC
Q 044014 65 TLLAASEDPR 74 (127)
Q Consensus 65 alm~af~~pl 74 (127)
-+.+.|++|.
T Consensus 296 Kv~l~f~~~f 305 (516)
T 1rsg_A 296 KVIFEFEECC 305 (516)
T ss_dssp EEEEEESSCC
T ss_pred EEEEEeCCCC
Confidence 7888888875
No 22
>4gde_A UDP-galactopyranose mutase; flavin adenine dinucleotide binding, nucleotide binding, MUT isomerase; HET: FDA; 2.20A {Aspergillus fumigatus} PDB: 3ute_A* 3utg_A* 3uth_A* 4gdc_A* 4gdd_A* 3utf_A* 3ukh_A* 3ukf_A* 3uka_A* 3ukl_A* 3ukk_A* 3ukq_A* 3ukp_A*
Probab=90.04 E-value=0.39 Score=38.77 Aligned_cols=60 Identities=8% Similarity=0.111 Sum_probs=45.6
Q ss_pred ecCCceEEEEEecCCceEEecCCCccCCCcEEEEccChHhHHHHH----------hccccceeeeeeeccCC
Q 044014 12 IPSNETLLDLEPFNRMWHLSENGESCGQFDVIIIARNGKCANRLL----------RMQLSSIWTLLAASEDP 73 (127)
Q Consensus 12 ~~~~t~V~~l~~~~~~W~L~~~g~~~G~FD~VVvA~Pa~QA~~Ll----------~~~~~pcWalm~af~~p 73 (127)
|=.+++|.++..+++.+.+. +|+. -.+|.||+|+|.+...++| ...+.+.-++.++|+..
T Consensus 239 i~~~~~V~~I~~~~~~v~~~-~G~~-~~ad~vI~t~P~~~l~~~l~~~~~~~~~~~l~y~~~~~v~l~~~~~ 308 (513)
T 4gde_A 239 FGEKGKVTKVNANNKTVTLQ-DGTT-IGYKKLVSTMAVDFLAEAMNDQELVGLTKQLFYSSTHVIGVGVRGS 308 (513)
T ss_dssp ESGGGCEEEEETTTTEEEET-TSCE-EEEEEEEECSCHHHHHHHTTCHHHHHHHTTCCEEEEEEEEEEEESS
T ss_pred eecceEEEEEEccCCEEEEc-CCCE-EECCEEEECCCHHHHHHhcCchhhHhhhhcccCCceEEEEEEEecc
Confidence 34689999999988776554 4433 3579999999999999887 34567777888888664
No 23
>2z3y_A Lysine-specific histone demethylase 1; chromatin, nucleosome, transcription, LSD1, alternative splicing, chromatin regulator, coiled coil; HET: F2N; 2.25A {Homo sapiens} SCOP: a.4.1.18 c.3.1.2 d.16.1.5 PDB: 2ejr_A* 2z5u_A* 3abt_A* 3abu_A* 2y48_A* 2v1d_A* 2h94_A* 2iw5_A* 2uxn_A* 2uxx_A* 2hko_A* 2dw4_A* 2x0l_A* 2l3d_A
Probab=86.11 E-value=0.6 Score=40.38 Aligned_cols=64 Identities=9% Similarity=-0.007 Sum_probs=47.4
Q ss_pred ecCCceEEEEEecCCceEEe-cCC-----CccCCCcEEEEccChHhHHHHH------------------hccccceeeee
Q 044014 12 IPSNETLLDLEPFNRMWHLS-ENG-----ESCGQFDVIIIARNGKCANRLL------------------RMQLSSIWTLL 67 (127)
Q Consensus 12 ~~~~t~V~~l~~~~~~W~L~-~~g-----~~~G~FD~VVvA~Pa~QA~~Ll------------------~~~~~pcWalm 67 (127)
|-.+++|.+|++.++++.+. .++ ...-.+|.||+|+|.....++. ...|.+.=-+.
T Consensus 413 I~l~~~V~~I~~~~~~v~V~~~~~~~~~~~~~~~Ad~VI~tvP~~vL~~l~~~i~f~P~LP~~k~~Ai~~l~~g~~~KV~ 492 (662)
T 2z3y_A 413 IKLNTAVRQVRYTASGCEVIAVNTRSTSQTFIYKCDAVLCTLPLGVLKQQPPAVQFVPPLPEWKTSAVQRMGFGNLNKVV 492 (662)
T ss_dssp EETTEEEEEEEEETTEEEEEEEESSCTTCEEEEEESEEEECCCHHHHHCSSCSSEEESCCCHHHHHHHHHSEECCCEEEE
T ss_pred eecCCeEEEEEECCCcEEEEEeecccCCCCeEEEeCEEEECCCHHHHhcccCceEEcCCCCHHHHHHHHhCCccceeEEE
Confidence 45799999999999999997 431 1123479999999998877531 33466777788
Q ss_pred eeccCCCC
Q 044014 68 AASEDPRL 75 (127)
Q Consensus 68 ~af~~pl~ 75 (127)
+.|++|.-
T Consensus 493 l~f~~~fW 500 (662)
T 2z3y_A 493 LCFDRVFW 500 (662)
T ss_dssp EECSSCCS
T ss_pred EEcCcccc
Confidence 89988753
No 24
>2xag_A Lysine-specific histone demethylase 1; amine oxidase, chromatin regulator, histone inhibitor binding, methylation, nucleosome core, oxidoreductase; HET: FAD TCF; 3.10A {Homo sapiens} PDB: 2xaf_A* 2xah_A* 2xaj_A* 2xaq_A* 2xas_A* 2com_A
Probab=81.31 E-value=1.2 Score=40.34 Aligned_cols=64 Identities=9% Similarity=-0.007 Sum_probs=46.9
Q ss_pred ecCCceEEEEEecCCceEEe-cC---C--CccCCCcEEEEccChHhHHHHH------------------hccccceeeee
Q 044014 12 IPSNETLLDLEPFNRMWHLS-EN---G--ESCGQFDVIIIARNGKCANRLL------------------RMQLSSIWTLL 67 (127)
Q Consensus 12 ~~~~t~V~~l~~~~~~W~L~-~~---g--~~~G~FD~VVvA~Pa~QA~~Ll------------------~~~~~pcWalm 67 (127)
|=.++.|.+|++.++++.+. .+ + ...-.+|.||+|+|.....+++ ...|.+.=-+.
T Consensus 584 I~Lnt~V~~I~~~~~gV~V~~~~~~~~~~g~~i~AD~VIvTvPl~vLk~l~~~I~F~P~LP~~k~~AI~~l~~g~v~KV~ 663 (852)
T 2xag_A 584 IKLNTAVRQVRYTASGCEVIAVNTRSTSQTFIYKCDAVLCTLPLGVLKQQPPAVQFVPPLPEWKTSAVQRMGFGNLNKVV 663 (852)
T ss_dssp EECSEEEEEEEEETTEEEEEEEESSSTTCEEEEEESEEEECCCHHHHHCSSCSSEEESCCCHHHHHHHHHSEECCCEEEE
T ss_pred EEeCCeEEEEEEcCCcEEEEEeecccCCCCeEEECCEEEECCCHHHHHhhhcccccCCCCCHHHHHHHHcCCccceEEEE
Confidence 45789999999999999987 43 1 1122479999999999887631 33456666788
Q ss_pred eeccCCCC
Q 044014 68 AASEDPRL 75 (127)
Q Consensus 68 ~af~~pl~ 75 (127)
+.|+++.-
T Consensus 664 L~F~~~fW 671 (852)
T 2xag_A 664 LCFDRVFW 671 (852)
T ss_dssp EECSSCCS
T ss_pred EEcCCccc
Confidence 89988753
No 25
>4a9w_A Monooxygenase; baeyer-villiger, FAD, oxidoreductase; HET: FAD; 2.72A {Stenotrophomonas maltophilia}
Probab=67.13 E-value=4.3 Score=30.37 Aligned_cols=35 Identities=9% Similarity=0.020 Sum_probs=28.4
Q ss_pred cCCceEEEEEecCCceE-Ee-cCCCccCCCcEEEEccCh
Q 044014 13 PSNETLLDLEPFNRMWH-LS-ENGESCGQFDVIIIARNG 49 (127)
Q Consensus 13 ~~~t~V~~l~~~~~~W~-L~-~~g~~~G~FD~VVvA~Pa 49 (127)
=.+++|.+++..+++|. +. ++| .-.||.||+|+=.
T Consensus 94 ~~~~~v~~i~~~~~~~~~v~~~~g--~~~~d~vV~AtG~ 130 (357)
T 4a9w_A 94 LRPIRVQRVSHFGERLRVVARDGR--QWLARAVISATGT 130 (357)
T ss_dssp ECSCCEEEEEEETTEEEEEETTSC--EEEEEEEEECCCS
T ss_pred EcCCEEEEEEECCCcEEEEEeCCC--EEEeCEEEECCCC
Confidence 36789999999999999 98 555 3468999999853
No 26
>1ryi_A Glycine oxidase; flavoprotein, protein-inhibitor complex, oxidoreductase; HET: FAD; 1.80A {Bacillus subtilis} SCOP: c.3.1.2 d.16.1.3 PDB: 3if9_A* 1ng4_A* 1ng3_A*
Probab=66.63 E-value=5.1 Score=30.77 Aligned_cols=57 Identities=7% Similarity=0.041 Sum_probs=41.1
Q ss_pred CCceEEEEEecCCceEEe-cCCCccCCCcEEEEccChHhHHHHH-----hccccceeeeeeeccCC
Q 044014 14 SNETLLDLEPFNRMWHLS-ENGESCGQFDVIIIARNGKCANRLL-----RMQLSSIWTLLAASEDP 73 (127)
Q Consensus 14 ~~t~V~~l~~~~~~W~L~-~~g~~~G~FD~VVvA~Pa~QA~~Ll-----~~~~~pcWalm~af~~p 73 (127)
.+++|.+++.++++|.+. .+| . -.+|.||+|+.+- +..|+ ...+.|+...++.++.+
T Consensus 183 ~~~~v~~i~~~~~~~~v~~~~g-~-~~a~~vV~A~G~~-s~~l~~~~~~~~~~~~~~g~~~~~~~~ 245 (382)
T 1ryi_A 183 EHTPVLHVERDGEALFIKTPSG-D-VWANHVVVASGVW-SGMFFKQLGLNNAFLPVKGECLSVWND 245 (382)
T ss_dssp TTCCCCEEECSSSSEEEEETTE-E-EEEEEEEECCGGG-THHHHHHTTCCCCCEEEEEEEEEEECC
T ss_pred cCCcEEEEEEECCEEEEEcCCc-e-EEcCEEEECCChh-HHHHHHhcCCCCceeccceEEEEECCC
Confidence 578999999988889776 545 2 3579999999774 33344 33577888888877654
No 27
>2gv8_A Monooxygenase; FMO, FAD, NADPH, cofactor complex, PSI, structura genomics, protein structure initiative; HET: FAD NDP; 2.10A {Schizosaccharomyces pombe} SCOP: c.3.1.5 c.3.1.5 PDB: 2gvc_A* 1vqw_A*
Probab=66.28 E-value=4.3 Score=32.65 Aligned_cols=36 Identities=25% Similarity=0.459 Sum_probs=28.0
Q ss_pred cCCceEEEEEecCCceEEe-cC---CC--ccCCCcEEEEccC
Q 044014 13 PSNETLLDLEPFNRMWHLS-EN---GE--SCGQFDVIIIARN 48 (127)
Q Consensus 13 ~~~t~V~~l~~~~~~W~L~-~~---g~--~~G~FD~VVvA~P 48 (127)
-.+++|.+++..+++|.+. .+ |+ ..-.||.||+|+=
T Consensus 133 ~~~t~V~~v~~~~~~~~V~~~~~~~G~~~~~~~~d~VVvAtG 174 (447)
T 2gv8_A 133 KLATDVLDIEKKDGSWVVTYKGTKAGSPISKDIFDAVSICNG 174 (447)
T ss_dssp ECSEEEEEEEEETTEEEEEEEESSTTCCEEEEEESEEEECCC
T ss_pred EeCCEEEEEEeCCCeEEEEEeecCCCCeeEEEEeCEEEECCC
Confidence 3689999999999999997 43 43 1346899999974
No 28
>3d1c_A Flavin-containing putative monooxygenase; NP_373108.1, struc genomics, joint center for structural genomics, JCSG; HET: FAD UNL; 2.40A {Staphylococcus aureus}
Probab=61.92 E-value=6.7 Score=29.85 Aligned_cols=34 Identities=12% Similarity=0.246 Sum_probs=26.8
Q ss_pred CCceEEEEEecCCceEEe-cCCCccCCCcEEEEccCh
Q 044014 14 SNETLLDLEPFNRMWHLS-ENGESCGQFDVIIIARNG 49 (127)
Q Consensus 14 ~~t~V~~l~~~~~~W~L~-~~g~~~G~FD~VVvA~Pa 49 (127)
.+++|.++++.+++|.+. .+| . -.||.||+|+=.
T Consensus 107 ~~~~v~~i~~~~~~~~v~~~~g-~-~~~d~vVlAtG~ 141 (369)
T 3d1c_A 107 ENTVVTNISADDAYYTIATTTE-T-YHADYIFVATGD 141 (369)
T ss_dssp CSCCEEEEEECSSSEEEEESSC-C-EEEEEEEECCCS
T ss_pred eCCEEEEEEECCCeEEEEeCCC-E-EEeCEEEECCCC
Confidence 578999999988899997 554 2 358999999743
No 29
>1i8t_A UDP-galactopyranose mutase; rossman fold, FAD, contractase, isomerase; HET: FAD; 2.40A {Escherichia coli} SCOP: c.4.1.3 d.16.1.7
Probab=61.85 E-value=4 Score=32.32 Aligned_cols=35 Identities=14% Similarity=-0.053 Sum_probs=29.1
Q ss_pred CCcEEEEccChHhHHHHH--hccccceeeeeeeccCC
Q 044014 39 QFDVIIIARNGKCANRLL--RMQLSSIWTLLAASEDP 73 (127)
Q Consensus 39 ~FD~VVvA~Pa~QA~~Ll--~~~~~pcWalm~af~~p 73 (127)
.||.||+|+|..++.++. ..++++.=.+.++|+.+
T Consensus 223 ~~D~VV~a~p~~~~~~~~l~~l~y~s~~~v~~~~d~~ 259 (367)
T 1i8t_A 223 KAHRIIYTGPIDQYFDYRFGALEYRSLKFETERHEFP 259 (367)
T ss_dssp TEEEEEECSCHHHHTTTTTCCCCEEEEEEEEEEESSS
T ss_pred cCCEEEEeccHHHHHHHhhCCCCCceEEEEEEEeccc
Confidence 589999999999987664 66778888888888876
No 30
>2bi7_A UDP-galactopyranose mutase; FAD, flavoprotein, isomerase, lipopolysaccharide biosynthesi; HET: FAD; 2.0A {Klebsiella pneumoniae} SCOP: c.4.1.3 d.16.1.7 PDB: 2bi8_A* 1wam_A* 3inr_A* 3gf4_A* 3int_A* 3kyb_A*
Probab=59.72 E-value=5.6 Score=31.75 Aligned_cols=33 Identities=6% Similarity=-0.008 Sum_probs=27.9
Q ss_pred CCcEEEEccChHhHHHHH--hccccceeeeeeecc
Q 044014 39 QFDVIIIARNGKCANRLL--RMQLSSIWTLLAASE 71 (127)
Q Consensus 39 ~FD~VVvA~Pa~QA~~Ll--~~~~~pcWalm~af~ 71 (127)
.||.||+|+|.+++.+++ ..++++.=.+.+.|+
T Consensus 226 ~~d~VI~a~p~~~~~~~~lg~l~y~s~~~v~~~~d 260 (384)
T 2bi7_A 226 HYDHVFYSGPLDAFYGYQYGRLGYRTLDFKKFTYQ 260 (384)
T ss_dssp GSSEEEECSCHHHHTTTTTCCCCEEEEEEEEEEEE
T ss_pred cCCEEEEcCCHHHHHHhhcCCCCcceEEEEEEEeC
Confidence 399999999999998866 667888877888887
No 31
>3lzw_A Ferredoxin--NADP reductase 2; ferredoxin reductase, FAD, NADPH, flavoprotein, oxidor; HET: FAD NAP; 1.80A {Bacillus subtilis} PDB: 3lzx_A*
Probab=58.78 E-value=6 Score=29.40 Aligned_cols=34 Identities=12% Similarity=0.182 Sum_probs=27.2
Q ss_pred CCceEEEEEecCC-ceEEe-cCCCccCCCcEEEEccCh
Q 044014 14 SNETLLDLEPFNR-MWHLS-ENGESCGQFDVIIIARNG 49 (127)
Q Consensus 14 ~~t~V~~l~~~~~-~W~L~-~~g~~~G~FD~VVvA~Pa 49 (127)
.+++|.+++..++ .|.+. .+|+ -.||.||+|+=.
T Consensus 86 ~~~~v~~i~~~~~~~~~v~~~~g~--~~~d~vVlAtG~ 121 (332)
T 3lzw_A 86 LEQAVESVEKQADGVFKLVTNEET--HYSKTVIITAGN 121 (332)
T ss_dssp CSCCEEEEEECTTSCEEEEESSEE--EEEEEEEECCTT
T ss_pred ccCEEEEEEECCCCcEEEEECCCE--EEeCEEEECCCC
Confidence 4789999999877 89998 6564 568999999754
No 32
>3nyc_A D-arginine dehydrogenase; FAD, imino-arginine, oxidoreductas; HET: FAD IAR; 1.06A {Pseudomonas aeruginosa} PDB: 3nye_A* 3nyf_A* 3sm8_A*
Probab=58.19 E-value=5.3 Score=30.42 Aligned_cols=57 Identities=16% Similarity=0.271 Sum_probs=39.3
Q ss_pred CCceEEEEEecCCceEEe-cCCCccCCCcEEEEccChHhHHHHH---h---ccccceeeeeeeccCC
Q 044014 14 SNETLLDLEPFNRMWHLS-ENGESCGQFDVIIIARNGKCANRLL---R---MQLSSIWTLLAASEDP 73 (127)
Q Consensus 14 ~~t~V~~l~~~~~~W~L~-~~g~~~G~FD~VVvA~Pa~QA~~Ll---~---~~~~pcWalm~af~~p 73 (127)
.+|+|.+|++++++|.+. .+| . -.+|.||+|+-+ -+..|+ . ..+.|.-.-++.++.|
T Consensus 173 ~~~~V~~i~~~~~~~~V~t~~g-~-i~a~~VV~A~G~-~s~~l~~~~g~~~~~~~p~rg~~~~~~~~ 236 (381)
T 3nyc_A 173 CNHEALEIRRVDGAWEVRCDAG-S-YRAAVLVNAAGA-WCDAIAGLAGVRPLGLQPKRRSAFIFAPP 236 (381)
T ss_dssp SSCCCCEEEEETTEEEEECSSE-E-EEESEEEECCGG-GHHHHHHHHTCCCCCCEEEEEEEEEECCC
T ss_pred cCCEEEEEEEeCCeEEEEeCCC-E-EEcCEEEECCCh-hHHHHHHHhCCCCCceeeeEEEEEEECCC
Confidence 578999999999899997 555 2 356999999865 334444 2 3566766666666544
No 33
>3pvc_A TRNA 5-methylaminomethyl-2-thiouridine biosynthes bifunctional protein MNMC; structural genomics, PSI-biology; HET: FAD; 2.31A {Yersinia pestis} PDB: 3sgl_A*
Probab=54.95 E-value=9 Score=32.96 Aligned_cols=57 Identities=14% Similarity=0.291 Sum_probs=37.2
Q ss_pred CCceEEEEEecCCceEEe-cCCCccCCCcEEEEccChHhHHHHH---hccccceeeeeeecc
Q 044014 14 SNETLLDLEPFNRMWHLS-ENGESCGQFDVIIIARNGKCANRLL---RMQLSSIWTLLAASE 71 (127)
Q Consensus 14 ~~t~V~~l~~~~~~W~L~-~~g~~~G~FD~VVvA~Pa~QA~~Ll---~~~~~pcWalm~af~ 71 (127)
.+|+|.+|+.++++|.+. .+|+..-.+|.||+|+-+- +..|+ ...+.|.---++.++
T Consensus 431 ~~t~V~~l~~~~~~v~V~t~~G~~~i~Ad~VVlAtG~~-s~~l~~~~~lpl~p~rGq~~~~~ 491 (689)
T 3pvc_A 431 YQHELQRLKRIDSQWQLTFGQSQAAKHHATVILATGHR-LPEWEQTHHLPLSAVRGQVSHIP 491 (689)
T ss_dssp ESCCEEEEEECSSSEEEEEC-CCCCEEESEEEECCGGG-TTCSTTTTTSCCEEEEEEEEEEE
T ss_pred eCCeEeEEEEeCCeEEEEeCCCcEEEECCEEEECCCcc-hhccccccCCccccccCcEEEEC
Confidence 578999999999999997 5654123469999998654 44444 334555544444443
No 34
>3ps9_A TRNA 5-methylaminomethyl-2-thiouridine biosynthes bifunctional protein MNMC; rossmann fold, oxidase, methyl transferase, FAD; HET: FAD SAM; 2.54A {Escherichia coli} PDB: 3awi_A*
Probab=54.63 E-value=8.7 Score=32.86 Aligned_cols=57 Identities=12% Similarity=0.227 Sum_probs=38.7
Q ss_pred cCCceEEEEEecCCceEEe-cCCCccCCCcEEEEccChHhHHHHH---hccccceeeeeeecc
Q 044014 13 PSNETLLDLEPFNRMWHLS-ENGESCGQFDVIIIARNGKCANRLL---RMQLSSIWTLLAASE 71 (127)
Q Consensus 13 ~~~t~V~~l~~~~~~W~L~-~~g~~~G~FD~VVvA~Pa~QA~~Ll---~~~~~pcWalm~af~ 71 (127)
=.+|+|.+|+.++++|.+. .+|+. -.+|.||+|+-+- +..|+ ...+.|.---++.++
T Consensus 435 ~~~t~V~~l~~~~~~v~V~t~~G~~-i~Ad~VVlAtG~~-s~~l~~~~~lpl~p~rGq~~~~~ 495 (676)
T 3ps9_A 435 YYQYQLQNFSRKDDCWLLNFAGDQQ-ATHSVVVLANGHQ-ISRFSQTSTLPVYSVAGQVSHIP 495 (676)
T ss_dssp EESCCEEEEEEETTEEEEEETTSCE-EEESEEEECCGGG-GGCSTTTTTCSCEEEEEEEEEEE
T ss_pred EeCCeeeEEEEeCCeEEEEECCCCE-EECCEEEECCCcc-hhccccccCCcceeecCEEEEEC
Confidence 3578999999999999987 56544 3469999998553 44444 334556555555554
No 35
>3fbs_A Oxidoreductase; structural genomics, PSI2, MCSG, protein STR initiative, midwest center for structural genomics; HET: FAD; 2.15A {Agrobacterium tumefaciens}
Probab=53.59 E-value=9.1 Score=27.87 Aligned_cols=32 Identities=13% Similarity=0.114 Sum_probs=25.7
Q ss_pred ceEEEEEecCCceEEe-cCCCccCCCcEEEEccC
Q 044014 16 ETLLDLEPFNRMWHLS-ENGESCGQFDVIIIARN 48 (127)
Q Consensus 16 t~V~~l~~~~~~W~L~-~~g~~~G~FD~VVvA~P 48 (127)
++|.++++++++|.+. .+|+ .-.||.||+|+=
T Consensus 77 ~~v~~i~~~~~~~~v~~~~g~-~~~~d~vviAtG 109 (297)
T 3fbs_A 77 GRVTDAKGSFGEFIVEIDGGR-RETAGRLILAMG 109 (297)
T ss_dssp SCEEEEEEETTEEEEEETTSC-EEEEEEEEECCC
T ss_pred eEEEEEEEcCCeEEEEECCCC-EEEcCEEEECCC
Confidence 5899999999999998 6664 345799999974
No 36
>2uzz_A N-methyl-L-tryptophan oxidase; N-methyltryptophan oxidase (MTOX), oxidative demethylation of N-methyl-L-tryptophan, FAD, flavoenzyme; HET: FAD; 3.2A {Escherichia coli}
Probab=53.18 E-value=10 Score=28.94 Aligned_cols=54 Identities=15% Similarity=0.127 Sum_probs=35.8
Q ss_pred CCceEEEEEecCCceEEe-cCCCccCCCcEEEEccChHhHHHHH-hccccceeeeeeec
Q 044014 14 SNETLLDLEPFNRMWHLS-ENGESCGQFDVIIIARNGKCANRLL-RMQLSSIWTLLAAS 70 (127)
Q Consensus 14 ~~t~V~~l~~~~~~W~L~-~~g~~~G~FD~VVvA~Pa~QA~~Ll-~~~~~pcWalm~af 70 (127)
.+++|.+++.++++|.+. .+|+ -.+|.||+|+-+- +..|+ ...+.|.--.++.+
T Consensus 168 ~~~~V~~i~~~~~~~~v~~~~g~--~~a~~vV~a~G~~-s~~l~~~l~~~p~rg~~~~~ 223 (372)
T 2uzz_A 168 FNCPVTAIRHDDDGVTIETADGE--YQAKKAIVCAGTW-VKDLLPELPVQPVRKVFAWY 223 (372)
T ss_dssp CSCCEEEEEECSSSEEEEESSCE--EEEEEEEECCGGG-GGGTSTTCCCEEEECCEEEE
T ss_pred cCCEEEEEEEcCCEEEEEECCCe--EEcCEEEEcCCcc-HHhhccccCceEEEEEEEEE
Confidence 578999999988889887 5553 3569999998754 44454 23344544434333
No 37
>2gf3_A MSOX, monomeric sarcosine oxidase; flavoprotein oxidase, inhibitor 2-furoic acid, oxidoreductas; HET: FAD; 1.30A {Bacillus SP} SCOP: c.3.1.2 d.16.1.3 PDB: 1el7_A* 1el8_A* 1el9_A* 1eli_A* 1l9e_A* 2a89_A* 2gb0_A* 1el5_A* 3qse_A* 3qsm_A* 3qss_A* 3bhk_A* 3bhf_A* 3m12_A* 3m13_A* 3m0o_A* 1l9c_A* 1l9d_A* 1zov_A*
Probab=52.76 E-value=23 Score=26.95 Aligned_cols=56 Identities=18% Similarity=0.231 Sum_probs=39.5
Q ss_pred CCceEEEEEecCCceEEe-cCCCccCCCcEEEEccChHhHHHHH-----hccccceeeeeeeccC
Q 044014 14 SNETLLDLEPFNRMWHLS-ENGESCGQFDVIIIARNGKCANRLL-----RMQLSSIWTLLAASED 72 (127)
Q Consensus 14 ~~t~V~~l~~~~~~W~L~-~~g~~~G~FD~VVvA~Pa~QA~~Ll-----~~~~~pcWalm~af~~ 72 (127)
.+++|.+++.++++|.+. .+| . -.+|.||+|+-+- +..|+ ...+.|.-..++.++.
T Consensus 169 ~~~~v~~i~~~~~~~~v~~~~g-~-~~a~~vV~A~G~~-~~~l~~~~g~~~pl~~~rg~~~~~~~ 230 (389)
T 2gf3_A 169 THTRVEDFDISPDSVKIETANG-S-YTADKLIVSMGAW-NSKLLSKLNLDIPLQPYRQVVGFFES 230 (389)
T ss_dssp CSCCEEEEEECSSCEEEEETTE-E-EEEEEEEECCGGG-HHHHGGGGTEECCCEEEEEEEEEECC
T ss_pred cCcEEEEEEecCCeEEEEeCCC-E-EEeCEEEEecCcc-HHHHhhhhccCCceEEEEEEEEEEec
Confidence 578999999988889887 444 2 3569999998763 55565 2456676666666654
No 38
>3f8d_A Thioredoxin reductase (TRXB-3); redox protein, nucleotide binding, FAD, flavoprotein, oxidoreductase; HET: FAD; 1.40A {Sulfolobus solfataricus} PDB: 3f8p_A* 3f8r_A*
Probab=51.96 E-value=12 Score=27.50 Aligned_cols=36 Identities=8% Similarity=0.158 Sum_probs=25.8
Q ss_pred eeeecCCceEEEEEecCCceEEe-cCCCccCCCcEEEEcc
Q 044014 9 INIIPSNETLLDLEPFNRMWHLS-ENGESCGQFDVIIIAR 47 (127)
Q Consensus 9 ~~~~~~~t~V~~l~~~~~~W~L~-~~g~~~G~FD~VVvA~ 47 (127)
++++- ++|.+++++++.|.+. .+|+. -.||.||+|+
T Consensus 85 v~~~~--~~v~~i~~~~~~~~v~~~~g~~-~~~d~lvlAt 121 (323)
T 3f8d_A 85 VPVLL--DIVEKIENRGDEFVVKTKRKGE-FKADSVILGI 121 (323)
T ss_dssp CCEEE--SCEEEEEEC--CEEEEESSSCE-EEEEEEEECC
T ss_pred CEEEE--EEEEEEEecCCEEEEEECCCCE-EEcCEEEECc
Confidence 44555 7899999999999998 55543 3579999987
No 39
>2ywl_A Thioredoxin reductase related protein; uncharacterized conserved protein, rossmann fold, structural genomics, NPPSFA; HET: FAD; 1.60A {Thermus thermophilus} PDB: 2cvj_A*
Probab=51.50 E-value=12 Score=25.74 Aligned_cols=37 Identities=8% Similarity=0.341 Sum_probs=27.7
Q ss_pred eeeecCCceEEEEEecCCceEEe-cCCCccCCCcEEEEccCh
Q 044014 9 INIIPSNETLLDLEPFNRMWHLS-ENGESCGQFDVIIIARNG 49 (127)
Q Consensus 9 ~~~~~~~t~V~~l~~~~~~W~L~-~~g~~~G~FD~VVvA~Pa 49 (127)
++++. + +|.+++.++++|.+. .+| .-.+|.||+|+-.
T Consensus 71 v~v~~-~-~v~~i~~~~~~~~v~~~~g--~i~ad~vI~A~G~ 108 (180)
T 2ywl_A 71 AEVRP-G-VVKGVRDMGGVFEVETEEG--VEKAERLLLCTHK 108 (180)
T ss_dssp CEEEE-C-CCCEEEECSSSEEEECSSC--EEEEEEEEECCTT
T ss_pred CEEEe-C-EEEEEEEcCCEEEEEECCC--EEEECEEEECCCC
Confidence 45554 4 889999888889998 656 3467999999844
No 40
>3dme_A Conserved exported protein; structural genomics, PSI-2, PROT structure initiative, northeast structural genomics consort NESG; HET: FAD TLA; 1.70A {Bordetella pertussis}
Probab=51.39 E-value=13 Score=27.94 Aligned_cols=42 Identities=19% Similarity=0.035 Sum_probs=30.1
Q ss_pred CCceEEEEEecCCc-eEEe-cCCC-ccCCCcEEEEccChHhHHHHH
Q 044014 14 SNETLLDLEPFNRM-WHLS-ENGE-SCGQFDVIIIARNGKCANRLL 56 (127)
Q Consensus 14 ~~t~V~~l~~~~~~-W~L~-~~g~-~~G~FD~VVvA~Pa~QA~~Ll 56 (127)
.+++|.+++.++++ |.+. .+|+ ..-.+|.||+|+-+ -+..|+
T Consensus 169 ~~~~v~~i~~~~~~~~~v~~~~g~~~~~~a~~VV~A~G~-~s~~l~ 213 (369)
T 3dme_A 169 FHTPLIAGRVRPEGGFELDFGGAEPMTLSCRVLINAAGL-HAPGLA 213 (369)
T ss_dssp CSCCEEEEEECTTSSEEEEECTTSCEEEEEEEEEECCGG-GHHHHH
T ss_pred CCCEEEEEEEcCCceEEEEECCCceeEEEeCEEEECCCc-chHHHH
Confidence 58899999998766 9987 5553 22346899999844 466665
No 41
>2zbw_A Thioredoxin reductase; redox protein, oxidoreductase, structural genomics, NPPSFA, project on protein structural and functional analyses; HET: FAD; 2.10A {Thermus thermophilus}
Probab=50.80 E-value=12 Score=27.99 Aligned_cols=35 Identities=20% Similarity=0.237 Sum_probs=26.9
Q ss_pred CCceEEEEEecCCceEEe-cCCCccCCCcEEEEccCh
Q 044014 14 SNETLLDLEPFNRMWHLS-ENGESCGQFDVIIIARNG 49 (127)
Q Consensus 14 ~~t~V~~l~~~~~~W~L~-~~g~~~G~FD~VVvA~Pa 49 (127)
.+++|.+++..++.|.+. .+|+. -.||.||+|+=.
T Consensus 84 ~~~~v~~i~~~~~~~~v~~~~g~~-~~~~~lv~AtG~ 119 (335)
T 2zbw_A 84 LGERAETLEREGDLFKVTTSQGNA-YTAKAVIIAAGV 119 (335)
T ss_dssp ESCCEEEEEEETTEEEEEETTSCE-EEEEEEEECCTT
T ss_pred eCCEEEEEEECCCEEEEEECCCCE-EEeCEEEECCCC
Confidence 478899999988889997 55533 457999999743
No 42
>4ap3_A Steroid monooxygenase; oxidoreductase, baeyer-villiger; HET: FAD NAP; 2.39A {Rhodococcus rhodochrous} PDB: 4aox_A* 4aos_A* 4ap1_A*
Probab=49.78 E-value=13 Score=31.25 Aligned_cols=35 Identities=9% Similarity=0.247 Sum_probs=27.8
Q ss_pred cCCceEEEEEecCC--ceEEe-cCCCccCCCcEEEEccC
Q 044014 13 PSNETLLDLEPFNR--MWHLS-ENGESCGQFDVIIIARN 48 (127)
Q Consensus 13 ~~~t~V~~l~~~~~--~W~L~-~~g~~~G~FD~VVvA~P 48 (127)
-.+++|.+++.+++ .|.+. ++|+.. .+|.||+|+=
T Consensus 119 ~~~~~V~~i~~~~~~~~w~V~~~~G~~i-~ad~lV~AtG 156 (549)
T 4ap3_A 119 RFDTRVTSAVLDEEGLRWTVRTDRGDEV-SARFLVVAAG 156 (549)
T ss_dssp ECSCCEEEEEEETTTTEEEEEETTCCEE-EEEEEEECCC
T ss_pred EECCEEEEEEEcCCCCEEEEEECCCCEE-EeCEEEECcC
Confidence 36889999988775 89998 767544 5799999985
No 43
>3gwf_A Cyclohexanone monooxygenase; flavoprotein biocatalysis baeyer-villiger oxidation green CH monooxygenase, oxidoreductase; HET: FAD NAP; 2.20A {Rhodococcus SP} PDB: 3gwd_A* 3ucl_A*
Probab=49.63 E-value=12 Score=31.58 Aligned_cols=36 Identities=11% Similarity=0.295 Sum_probs=28.1
Q ss_pred ecCCceEEEEEecCC--ceEEe-cCCCccCCCcEEEEccC
Q 044014 12 IPSNETLLDLEPFNR--MWHLS-ENGESCGQFDVIIIARN 48 (127)
Q Consensus 12 ~~~~t~V~~l~~~~~--~W~L~-~~g~~~G~FD~VVvA~P 48 (127)
|-.+++|.+++.+++ .|.+. .+|+.. .+|.||+|+=
T Consensus 106 i~~~~~V~~i~~~~~~~~~~V~~~~G~~i-~ad~lV~AtG 144 (540)
T 3gwf_A 106 FKFGTEVTSALYLDDENLWEVTTDHGEVY-RAKYVVNAVG 144 (540)
T ss_dssp EEESCCEEEEEEETTTTEEEEEETTSCEE-EEEEEEECCC
T ss_pred eEeccEEEEEEEeCCCCEEEEEEcCCCEE-EeCEEEECCc
Confidence 345789999998875 89998 666543 5799999974
No 44
>1v0j_A UDP-galactopyranose mutase; flavoprotein, isomerase; HET: FAD BCN; 2.25A {Mycobacterium tuberculosis}
Probab=49.06 E-value=8.6 Score=30.68 Aligned_cols=35 Identities=3% Similarity=-0.184 Sum_probs=25.9
Q ss_pred CCcEEEEccChHhHHHHH--hccccceeeeeeeccCC
Q 044014 39 QFDVIIIARNGKCANRLL--RMQLSSIWTLLAASEDP 73 (127)
Q Consensus 39 ~FD~VVvA~Pa~QA~~Ll--~~~~~pcWalm~af~~p 73 (127)
.||.||+|+|..++.++. ..++++.=.+.+.++.+
T Consensus 237 ~aD~VI~t~p~~~l~~~~l~~l~y~s~~~~~~~~~~~ 273 (399)
T 1v0j_A 237 PAAPVVYTGPLDRYFDYAEGRLGWRTLDFEVEVLPIG 273 (399)
T ss_dssp TTCCEEECSCHHHHTTTTTCCCCEEEEEEEEEEESSS
T ss_pred cCCEEEECCcHHHHHhhhhCCCCcceEEEEEEEEccc
Confidence 589999999999988765 55666544455566665
No 45
>2xdo_A TETX2 protein; tetracycline degradation, tigecycline, flavin, bacteroides F oxidoreductase; HET: FAD; 2.09A {Bacteroides thetaiotaomicron} PDB: 2y6q_A* 2xyo_A* 2y6r_A* 3p9u_A*
Probab=48.71 E-value=17 Score=28.44 Aligned_cols=36 Identities=36% Similarity=0.576 Sum_probs=28.5
Q ss_pred cCCceEEEEEecCCceEEe-cCCCccCCCcEEEEccCh
Q 044014 13 PSNETLLDLEPFNRMWHLS-ENGESCGQFDVIIIARNG 49 (127)
Q Consensus 13 ~~~t~V~~l~~~~~~W~L~-~~g~~~G~FD~VVvA~Pa 49 (127)
=.+++|.+++.++++|.+. .+|+. -.+|.||.|.=.
T Consensus 144 ~~~~~v~~i~~~~~~v~v~~~~g~~-~~ad~vV~AdG~ 180 (398)
T 2xdo_A 144 IWDRKLVMLEPGKKKWTLTFENKPS-ETADLVILANGG 180 (398)
T ss_dssp EESCCEEEEEECSSSEEEEETTSCC-EEESEEEECSCT
T ss_pred EECCEEEEEEECCCEEEEEECCCcE-EecCEEEECCCc
Confidence 3588999999999899998 66643 357999998843
No 46
>3s5w_A L-ornithine 5-monooxygenase; class B flavin dependent N-hydroxylating monooxygenase, CLAS flavin dependent monooxygenase N-hydroxylating; HET: FAD ONH NAP; 1.90A {Pseudomonas aeruginosa} PDB: 3s61_A*
Probab=46.68 E-value=17 Score=28.97 Aligned_cols=35 Identities=20% Similarity=0.258 Sum_probs=27.1
Q ss_pred cCCceEEEEEecCCceEEe-c---CCCc-cCCCcEEEEcc
Q 044014 13 PSNETLLDLEPFNRMWHLS-E---NGES-CGQFDVIIIAR 47 (127)
Q Consensus 13 ~~~t~V~~l~~~~~~W~L~-~---~g~~-~G~FD~VVvA~ 47 (127)
=.+++|.+++.++++|.|. . +|+. .-.+|.||+|+
T Consensus 334 ~~~~~v~~v~~~~~~~~v~~~~~~~g~~~~~~~D~Vv~At 373 (463)
T 3s5w_A 334 RCMTTVERATATAQGIELALRDAGSGELSVETYDAVILAT 373 (463)
T ss_dssp ETTEEEEEEEEETTEEEEEEEETTTCCEEEEEESEEEECC
T ss_pred EeCCEEEEEEecCCEEEEEEEEcCCCCeEEEECCEEEEee
Confidence 3578999999999999986 4 4543 24589999997
No 47
>2xve_A Flavin-containing monooxygenase; oxidoreductase; HET: FAD; 1.99A {Methylophaga aminisulfidivorans} PDB: 2xvf_A* 2xvh_A* 2xvi_A* 2xvj_A* 2xlt_A* 2vqb_A* 2vq7_A* 2xlu_A* 2xlp_A* 2xls_A* 2xlr_A*
Probab=46.33 E-value=12 Score=30.56 Aligned_cols=37 Identities=14% Similarity=0.264 Sum_probs=27.4
Q ss_pred ecCCceEEEEEecCC--ceEEe-cC---CC-ccCCCcEEEEccC
Q 044014 12 IPSNETLLDLEPFNR--MWHLS-EN---GE-SCGQFDVIIIARN 48 (127)
Q Consensus 12 ~~~~t~V~~l~~~~~--~W~L~-~~---g~-~~G~FD~VVvA~P 48 (127)
|=.+++|.++++.++ +|.+. .+ |+ ..-.||.||+|+=
T Consensus 120 i~~~~~V~~v~~~~~~~~~~V~~~~~~~g~~~~~~~d~VVvAtG 163 (464)
T 2xve_A 120 IRFNTAVRHVEFNEDSQTFTVTVQDHTTDTIYSEEFDYVVCCTG 163 (464)
T ss_dssp EECSEEEEEEEEETTTTEEEEEEEETTTTEEEEEEESEEEECCC
T ss_pred EEeCCEEEEEEEcCCCCcEEEEEEEcCCCceEEEEcCEEEECCC
Confidence 346899999998876 89997 43 31 2346999999985
No 48
>3v76_A Flavoprotein; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; HET: FDA; 2.51A {Sinorhizobium meliloti}
Probab=46.25 E-value=13 Score=30.15 Aligned_cols=36 Identities=14% Similarity=0.257 Sum_probs=28.3
Q ss_pred cCCceEEEEEecCCceEEe-cCCCccCCCcEEEEccChH
Q 044014 13 PSNETLLDLEPFNRMWHLS-ENGESCGQFDVIIIARNGK 50 (127)
Q Consensus 13 ~~~t~V~~l~~~~~~W~L~-~~g~~~G~FD~VVvA~Pa~ 50 (127)
=.+++|.+++.++++|.+. .+| .-.+|.||+|+=+-
T Consensus 150 ~~~~~V~~i~~~~~~~~V~~~~g--~i~ad~VIlAtG~~ 186 (417)
T 3v76_A 150 RLETSIGEVERTASGFRVTTSAG--TVDAASLVVASGGK 186 (417)
T ss_dssp ECSCCEEEEEEETTEEEEEETTE--EEEESEEEECCCCS
T ss_pred EECCEEEEEEEeCCEEEEEECCc--EEEeeEEEECCCCc
Confidence 3678999999999899997 555 33579999998543
No 49
>2vou_A 2,6-dihydroxypyridine hydroxylase; oxidoreductase, aromatic hydroxylase, nicotine degradation, mono-oxygenase; HET: FAD; 2.6A {Arthrobacter nicotinovorans} SCOP: c.3.1.2 d.16.1.2
Probab=45.93 E-value=19 Score=28.11 Aligned_cols=51 Identities=14% Similarity=0.253 Sum_probs=34.9
Q ss_pred cCCceEEEEEecCCceEEe-cCCCccCCCcEEEEccChHh-HHHHHhccccceee
Q 044014 13 PSNETLLDLEPFNRMWHLS-ENGESCGQFDVIIIARNGKC-ANRLLRMQLSSIWT 65 (127)
Q Consensus 13 ~~~t~V~~l~~~~~~W~L~-~~g~~~G~FD~VVvA~Pa~Q-A~~Ll~~~~~pcWa 65 (127)
=.+++|.+++.++++|.+. .+|+. -.+|.||.|.=.-- .++++. ...|.+.
T Consensus 115 ~~~~~v~~i~~~~~~v~v~~~~g~~-~~ad~vV~AdG~~S~vr~~~~-~~~~~~~ 167 (397)
T 2vou_A 115 HTSKCLVGLSQDSETVQMRFSDGTK-AEANWVIGADGGASVVRKRLL-GIEPTYA 167 (397)
T ss_dssp ETTCCEEEEEECSSCEEEEETTSCE-EEESEEEECCCTTCHHHHHHH-CCCCEEE
T ss_pred EcCCEEEEEEecCCEEEEEECCCCE-EECCEEEECCCcchhHHHHhc-cCCCCcc
Confidence 4688999999999999998 66643 46799999985432 334443 3444444
No 50
>3dje_A Fructosyl amine: oxygen oxidoreductase; fructosyl-amino acid, amadoriase, deglycation, fructosamine oxidase; HET: MSE FAD FSA EPE; 1.60A {Aspergillus fumigatus} PDB: 3djd_A*
Probab=43.60 E-value=18 Score=28.47 Aligned_cols=38 Identities=13% Similarity=0.137 Sum_probs=27.7
Q ss_pred eEEEEEecCCceE-Ee-cCCCccCCCcEEEEccChHhHHHHH
Q 044014 17 TLLDLEPFNRMWH-LS-ENGESCGQFDVIIIARNGKCANRLL 56 (127)
Q Consensus 17 ~V~~l~~~~~~W~-L~-~~g~~~G~FD~VVvA~Pa~QA~~Ll 56 (127)
+|.+|+.++++|. +. .+|+.. .+|.||+|+-+- +..|+
T Consensus 186 ~V~~i~~~~~~v~gV~t~~G~~i-~Ad~VV~AtG~~-s~~l~ 225 (438)
T 3dje_A 186 RVVTLIFENNDVKGAVTADGKIW-RAERTFLCAGAS-AGQFL 225 (438)
T ss_dssp CEEEEEEETTEEEEEEETTTEEE-ECSEEEECCGGG-GGGTS
T ss_pred eEEEEEecCCeEEEEEECCCCEE-ECCEEEECCCCC-hhhhc
Confidence 9999999988998 77 666333 459999998654 34444
No 51
>1y56_B Sarcosine oxidase; dehydrogenase, protein-protein complex, oxidoreductase; HET: FAD FMN ATP CXS; 2.86A {Pyrococcus horikoshii}
Probab=42.85 E-value=21 Score=27.31 Aligned_cols=35 Identities=11% Similarity=0.048 Sum_probs=26.9
Q ss_pred CCceEEEEEecCCceE-Ee-cCCCccCCCcEEEEccChH
Q 044014 14 SNETLLDLEPFNRMWH-LS-ENGESCGQFDVIIIARNGK 50 (127)
Q Consensus 14 ~~t~V~~l~~~~~~W~-L~-~~g~~~G~FD~VVvA~Pa~ 50 (127)
.+++|.+++.++++|. +. .+| . -.+|.||+|+-+-
T Consensus 168 ~~~~v~~i~~~~~~v~gv~~~~g-~-i~a~~VV~A~G~~ 204 (382)
T 1y56_B 168 EYTEVKGFLIENNEIKGVKTNKG-I-IKTGIVVNATNAW 204 (382)
T ss_dssp CSCCEEEEEESSSBEEEEEETTE-E-EECSEEEECCGGG
T ss_pred CCceEEEEEEECCEEEEEEECCc-E-EECCEEEECcchh
Confidence 5789999999988998 76 555 2 3469999998653
No 52
>3rp8_A Flavoprotein monooxygenase; FAD-binding protein, oxidoreductase; HET: FAD; 1.97A {Klebsiella pneumoniae} PDB: 3rp7_A* 3rp6_A*
Probab=41.27 E-value=21 Score=27.80 Aligned_cols=35 Identities=14% Similarity=0.072 Sum_probs=28.4
Q ss_pred CCceEEEEEecCCceEEe-cCCCccCCCcEEEEccCh
Q 044014 14 SNETLLDLEPFNRMWHLS-ENGESCGQFDVIIIARNG 49 (127)
Q Consensus 14 ~~t~V~~l~~~~~~W~L~-~~g~~~G~FD~VVvA~Pa 49 (127)
.+++|.+++.++++|.+. .+|+ .-.+|.||.|.=.
T Consensus 144 ~~~~v~~i~~~~~~v~v~~~~g~-~~~a~~vV~AdG~ 179 (407)
T 3rp8_A 144 FGKRVTRCEEDADGVTVWFTDGS-SASGDLLIAADGS 179 (407)
T ss_dssp ESCCEEEEEEETTEEEEEETTSC-EEEESEEEECCCT
T ss_pred ECCEEEEEEecCCcEEEEEcCCC-EEeeCEEEECCCc
Confidence 689999999999999998 6665 3456999998743
No 53
>2x3n_A Probable FAD-dependent monooxygenase; oxidoreductase; HET: FAD; 1.75A {Pseudomonas aeruginosa}
Probab=41.07 E-value=21 Score=27.67 Aligned_cols=43 Identities=14% Similarity=0.069 Sum_probs=31.1
Q ss_pred cCCceEEEEEecCCce--EEe-cCCCccCCCcEEEEccChHh-HHHHH
Q 044014 13 PSNETLLDLEPFNRMW--HLS-ENGESCGQFDVIIIARNGKC-ANRLL 56 (127)
Q Consensus 13 ~~~t~V~~l~~~~~~W--~L~-~~g~~~G~FD~VVvA~Pa~Q-A~~Ll 56 (127)
=.+++|.+++.++++| .+. .+|+. -.+|.||.|+=.-- ..+++
T Consensus 126 ~~~~~v~~i~~~~~~v~g~v~~~~g~~-~~ad~vV~AdG~~s~vr~~l 172 (399)
T 2x3n_A 126 LFETRIEAVQRDERHAIDQVRLNDGRV-LRPRVVVGADGIASYVRRRL 172 (399)
T ss_dssp ECSCCEEEEEECTTSCEEEEEETTSCE-EEEEEEEECCCTTCHHHHHT
T ss_pred EcCCEEEEEEEcCCceEEEEEECCCCE-EECCEEEECCCCChHHHHHh
Confidence 3678999999999999 887 66653 35699999985432 34444
No 54
>3ayj_A Pro-enzyme of L-phenylalanine oxidase; amino acid oxidase, flavoenzyme, L- binding, oxidoreductase; HET: FAD PHE; 1.10A {Pseudomonas} PDB: 2yr4_A* 2yr6_A* 3ayi_A* 2yr5_A* 3ayl_A*
Probab=39.56 E-value=24 Score=31.50 Aligned_cols=44 Identities=11% Similarity=0.070 Sum_probs=30.5
Q ss_pred cCCceEE--EEEecCCc-------eEEe--cCCCc-cCCCcEEEEccChHhHHHHH
Q 044014 13 PSNETLL--DLEPFNRM-------WHLS--ENGES-CGQFDVIIIARNGKCANRLL 56 (127)
Q Consensus 13 ~~~t~V~--~l~~~~~~-------W~L~--~~g~~-~G~FD~VVvA~Pa~QA~~Ll 56 (127)
-.+++|. +|.+.+++ =.+. .+|+. .-.||.||+|+|..+...++
T Consensus 364 ~l~~~V~~~~I~~~~~g~~~~~~~V~V~~~~~G~~~~~~aD~VIvTvP~~~L~~~~ 419 (721)
T 3ayj_A 364 KLVVQVRQERVANACHSGTASARAQLLSYDSHNAVHSEAYDFVILAVPHDQLTPIV 419 (721)
T ss_dssp SEEEEEECEEEEEEEECSSSSCCEEEEEEETTCCEEEEEESEEEECSCHHHHHHHH
T ss_pred EeCCEEEeeeEEECCCCCccccceEEEEEecCCceEEEEcCEEEECCCHHHHhhcc
Confidence 3467888 88887544 5553 44431 34589999999999987644
No 55
>3uox_A Otemo; baeyer-villiger monooxygenase, oxidoreductase; HET: FAD; 1.96A {Pseudomonas putida} PDB: 3uov_A* 3uoy_A* 3uoz_A* 3up4_A* 3up5_A*
Probab=38.62 E-value=18 Score=30.39 Aligned_cols=36 Identities=19% Similarity=0.341 Sum_probs=27.5
Q ss_pred ecCCceEEEEEecC--CceEEe-cCCCccCCCcEEEEccC
Q 044014 12 IPSNETLLDLEPFN--RMWHLS-ENGESCGQFDVIIIARN 48 (127)
Q Consensus 12 ~~~~t~V~~l~~~~--~~W~L~-~~g~~~G~FD~VVvA~P 48 (127)
|-.+++|.+++.++ +.|.+. ++|+.. .||.||+|+=
T Consensus 106 i~~~~~V~~~~~~~~~~~w~V~~~~G~~~-~ad~lV~AtG 144 (545)
T 3uox_A 106 YRFNTRVTAARYVENDRLWEVTLDNEEVV-TCRFLISATG 144 (545)
T ss_dssp EECSCCEEEEEEEGGGTEEEEEETTTEEE-EEEEEEECCC
T ss_pred EEECCEEEEEEEeCCCCEEEEEECCCCEE-EeCEEEECcC
Confidence 34678999998765 489998 666544 5799999985
No 56
>2q0l_A TRXR, thioredoxin reductase; bacterial thiredoxin reductase, NADP+ B reduced izoalloxazine bending, oxidoreductase; HET: FAD NAP; 1.45A {Helicobacter pylori} PDB: 2q0k_A* 3ish_A*
Probab=38.50 E-value=30 Score=25.50 Aligned_cols=36 Identities=14% Similarity=0.186 Sum_probs=26.8
Q ss_pred eeeecCCceEEEEEecCCceEEe-cCCCccCCCcEEEEcc
Q 044014 9 INIIPSNETLLDLEPFNRMWHLS-ENGESCGQFDVIIIAR 47 (127)
Q Consensus 9 ~~~~~~~t~V~~l~~~~~~W~L~-~~g~~~G~FD~VVvA~ 47 (127)
+.++- ++|.+++.++++|.+. .+|+. -.||.||+|+
T Consensus 74 v~~~~--~~v~~i~~~~~~~~v~~~~g~~-~~~~~vv~At 110 (311)
T 2q0l_A 74 LKHEM--TAVQRVSKKDSHFVILAEDGKT-FEAKSVIIAT 110 (311)
T ss_dssp CEEEC--SCEEEEEEETTEEEEEETTSCE-EEEEEEEECC
T ss_pred CEEEE--EEEEEEEEcCCEEEEEEcCCCE-EECCEEEECC
Confidence 34443 5889999988889996 55543 4579999997
No 57
>2oln_A NIKD protein; flavoprotein, rossmann fold, oxidoreductase; HET: FAD; 1.15A {Streptomyces tendae} PDB: 2olo_A* 3hzl_A* 2q6u_A*
Probab=36.50 E-value=24 Score=27.28 Aligned_cols=40 Identities=23% Similarity=0.294 Sum_probs=28.6
Q ss_pred CCceEEEEEecCCceEEe-cCCCccCCCcEEEEccChHhHHHHH
Q 044014 14 SNETLLDLEPFNRMWHLS-ENGESCGQFDVIIIARNGKCANRLL 56 (127)
Q Consensus 14 ~~t~V~~l~~~~~~W~L~-~~g~~~G~FD~VVvA~Pa~QA~~Ll 56 (127)
.+|+|.+++.++++|.+. .+| . -.+|.||+|+-+- +..|+
T Consensus 172 ~~~~V~~i~~~~~~v~v~t~~g-~-i~a~~VV~A~G~~-s~~l~ 212 (397)
T 2oln_A 172 AGETVTELVPDADGVSVTTDRG-T-YRAGKVVLACGPY-TNDLL 212 (397)
T ss_dssp ESCCEEEEEEETTEEEEEESSC-E-EEEEEEEECCGGG-HHHHH
T ss_pred CCCEEEEEEEcCCeEEEEECCC-E-EEcCEEEEcCCcC-hHHHh
Confidence 578999999988889887 444 2 2458999998653 33444
No 58
>3klj_A NAD(FAD)-dependent dehydrogenase, NIRB-family (N- domain); FAD-binding protein, GR-fold, oxidoreductase; HET: FAD; 2.10A {Clostridium acetobutylicum}
Probab=34.63 E-value=32 Score=27.32 Aligned_cols=32 Identities=28% Similarity=0.529 Sum_probs=23.0
Q ss_pred CCceEEEEEecCCceEEecCCCccCCCcEEEEcc
Q 044014 14 SNETLLDLEPFNRMWHLSENGESCGQFDVIIIAR 47 (127)
Q Consensus 14 ~~t~V~~l~~~~~~W~L~~~g~~~G~FD~VVvA~ 47 (127)
.+++|.+++++++...+ ++|+. -.||.||+|+
T Consensus 81 ~~~~V~~id~~~~~v~~-~~g~~-~~yd~lvlAt 112 (385)
T 3klj_A 81 TSEFATSIDPNNKLVTL-KSGEK-IKYEKLIIAS 112 (385)
T ss_dssp CSCCEEEEETTTTEEEE-TTSCE-EECSEEEECC
T ss_pred eCCEEEEEECCCCEEEE-CCCCE-EECCEEEEec
Confidence 57889999988764443 44433 3589999997
No 59
>1w4x_A Phenylacetone monooxygenase; baeyer-villiger, FAD; HET: FAD; 1.7A {Thermobifida fusca} SCOP: c.3.1.5 c.3.1.5 PDB: 2ylr_A* 2yls_A* 2ylt_A* 2ym1_A* 2ylw_A* 2ym2_A* 2ylx_A* 2ylz_A*
Probab=31.21 E-value=40 Score=27.89 Aligned_cols=35 Identities=14% Similarity=0.270 Sum_probs=26.8
Q ss_pred cCCceEEEEEecC--CceEEe-cCCCccCCCcEEEEccC
Q 044014 13 PSNETLLDLEPFN--RMWHLS-ENGESCGQFDVIIIARN 48 (127)
Q Consensus 13 ~~~t~V~~l~~~~--~~W~L~-~~g~~~G~FD~VVvA~P 48 (127)
-.+++|.+++.++ +.|.+. .+|+.. .+|.||+|+=
T Consensus 114 ~~~~~V~~~~~~~~~~~w~V~~~~G~~~-~ad~vV~AtG 151 (542)
T 1w4x_A 114 TFHTTVTAAAFDEATNTWTVDTNHGDRI-RARYLIMASG 151 (542)
T ss_dssp ECSCCEEEEEEETTTTEEEEEETTCCEE-EEEEEEECCC
T ss_pred EcCcEEEEEEEcCCCCeEEEEECCCCEE-EeCEEEECcC
Confidence 3578999998875 479998 666543 4799999984
No 60
>3ab1_A Ferredoxin--NADP reductase; oxidoreductase, electron transport, FAD, flavoprotein; HET: FAD; 2.39A {Chlorobaculum tepidum}
Probab=30.70 E-value=43 Score=25.36 Aligned_cols=35 Identities=17% Similarity=0.230 Sum_probs=26.4
Q ss_pred CCceEEEEEecCC-ceEEe-cCCCccCCCcEEEEccCh
Q 044014 14 SNETLLDLEPFNR-MWHLS-ENGESCGQFDVIIIARNG 49 (127)
Q Consensus 14 ~~t~V~~l~~~~~-~W~L~-~~g~~~G~FD~VVvA~Pa 49 (127)
.+++|.+++..++ .|.+. .+|+. -.||.||+|+=+
T Consensus 93 ~~~~v~~i~~~~~~~~~v~~~~g~~-~~~~~li~AtG~ 129 (360)
T 3ab1_A 93 LNETVTKYTKLDDGTFETRTNTGNV-YRSRAVLIAAGL 129 (360)
T ss_dssp CSCCEEEEEECTTSCEEEEETTSCE-EEEEEEEECCTT
T ss_pred cCCEEEEEEECCCceEEEEECCCcE-EEeeEEEEccCC
Confidence 5778999998765 79997 55533 357999999854
No 61
>2i0z_A NAD(FAD)-utilizing dehydrogenases; structural genomics, PSI-2, protein structure initiative, midwest center for structural genomics, MCSG; HET: FAD; 1.84A {Bacillus cereus} SCOP: c.3.1.8 e.74.1.1
Probab=30.60 E-value=43 Score=26.85 Aligned_cols=34 Identities=21% Similarity=0.216 Sum_probs=25.8
Q ss_pred CCceEEEEEecCCc-eEEe-cCCCccCCCcEEEEccC
Q 044014 14 SNETLLDLEPFNRM-WHLS-ENGESCGQFDVIIIARN 48 (127)
Q Consensus 14 ~~t~V~~l~~~~~~-W~L~-~~g~~~G~FD~VVvA~P 48 (127)
.+++|.++..++++ |.+. .+|+.. .+|.||+|+=
T Consensus 153 ~~~~V~~i~~~~~~v~~V~~~~G~~i-~Ad~VVlAtG 188 (447)
T 2i0z_A 153 TNTPVETIEYENGQTKAVILQTGEVL-ETNHVVIAVG 188 (447)
T ss_dssp CSCCEEEEEEETTEEEEEEETTCCEE-ECSCEEECCC
T ss_pred eCcEEEEEEecCCcEEEEEECCCCEE-ECCEEEECCC
Confidence 57899999987766 8887 666433 3599999983
No 62
>3d1c_A Flavin-containing putative monooxygenase; NP_373108.1, struc genomics, joint center for structural genomics, JCSG; HET: FAD UNL; 2.40A {Staphylococcus aureus}
Probab=29.65 E-value=37 Score=25.61 Aligned_cols=39 Identities=26% Similarity=0.332 Sum_probs=28.0
Q ss_pred eeeecCCceEEEEEecCCceEEe-cCCCccCCCcEEEEccC
Q 044014 9 INIIPSNETLLDLEPFNRMWHLS-ENGESCGQFDVIIIARN 48 (127)
Q Consensus 9 ~~~~~~~t~V~~l~~~~~~W~L~-~~g~~~G~FD~VVvA~P 48 (127)
|+++ .+++|.+++.++++..+. .+|+....+|.||+++.
T Consensus 230 v~~~-~~~~v~~i~~~~~~~~v~~~~g~~~~~~d~vi~a~G 269 (369)
T 3d1c_A 230 IEMN-VHYTVKDIDFNNGQYHISFDSGQSVHTPHEPILATG 269 (369)
T ss_dssp EEEE-CSCCEEEEEEETTEEEEEESSSCCEEESSCCEECCC
T ss_pred EEEe-cCcEEEEEEecCCceEEEecCCeEeccCCceEEeec
Confidence 4544 456888888777777776 67765555799999874
No 63
>1d5t_A Guanine nucleotide dissociation inhibitor; ultra-high resolution, hydrolase inhibitor; 1.04A {Bos taurus} SCOP: c.3.1.3 d.16.1.6 PDB: 1lv0_A* 1gnd_A
Probab=29.23 E-value=34 Score=27.48 Aligned_cols=59 Identities=14% Similarity=-0.002 Sum_probs=36.8
Q ss_pred ecCCceEEEEEecCCceEE-ecCCCccCCCcEEEEccChHhHHHHH-hccccceeeeeeeccCCCC
Q 044014 12 IPSNETLLDLEPFNRMWHL-SENGESCGQFDVIIIARNGKCANRLL-RMQLSSIWTLLAASEDPRL 75 (127)
Q Consensus 12 ~~~~t~V~~l~~~~~~W~L-~~~g~~~G~FD~VVvA~Pa~QA~~Ll-~~~~~pcWalm~af~~pl~ 75 (127)
|=.+++|.++...+++... ..+|+.. .+|.||+|++.... ++ ... ..+-++++ .+.+++
T Consensus 251 i~~~~~V~~I~~~~~~v~~v~~~g~~~-~ad~VV~a~~~~~~--~~~~~~-~~~~~~~i-l~~~~~ 311 (433)
T 1d5t_A 251 YMLNKPVDDIIMENGKVVGVKSEGEVA-RCKQLICDPSYVPD--RVRKAG-QVIRIICI-LSHPIK 311 (433)
T ss_dssp CBCSCCCCEEEEETTEEEEEEETTEEE-ECSEEEECGGGCGG--GEEEEE-EEEEEEEE-ESSCCT
T ss_pred EECCCEEEEEEEeCCEEEEEEECCeEE-ECCEEEECCCCCcc--cccccC-cceeEEEE-EcCccc
Confidence 3467899999988877664 3555443 46999999987643 23 211 23334444 677665
No 64
>2gqf_A Hypothetical protein HI0933; structural genomics, FAD-utilizing protein, flavoprotein, PS protein structure initiative; HET: FAD; 2.70A {Haemophilus influenzae} SCOP: c.3.1.8 e.74.1.1
Probab=28.31 E-value=41 Score=26.91 Aligned_cols=32 Identities=16% Similarity=0.174 Sum_probs=24.7
Q ss_pred CCceEEEEEec----CCceEEe-cCCCccCCCcEEEEcc
Q 044014 14 SNETLLDLEPF----NRMWHLS-ENGESCGQFDVIIIAR 47 (127)
Q Consensus 14 ~~t~V~~l~~~----~~~W~L~-~~g~~~G~FD~VVvA~ 47 (127)
.+++|.++..+ +++|.+. .+| . -.+|.||+|+
T Consensus 128 ~~~~v~~i~~~~~g~~~~~~v~~~~g-~-i~ad~VVlAt 164 (401)
T 2gqf_A 128 LRSEVSQVERIQNDEKVRFVLQVNST-Q-WQCKNLIVAT 164 (401)
T ss_dssp CSCCEEEEEECCSCSSCCEEEEETTE-E-EEESEEEECC
T ss_pred eCCEEEEEEcccCcCCCeEEEEECCC-E-EECCEEEECC
Confidence 57899999877 6679887 544 2 3569999998
No 65
>2cul_A Glucose-inhibited division protein A-related PROT probable oxidoreductase; rossmann fold, protein-FAD complex; HET: FAD; 1.65A {Thermus thermophilus} SCOP: c.3.1.7
Probab=28.28 E-value=76 Score=22.81 Aligned_cols=38 Identities=11% Similarity=0.101 Sum_probs=26.2
Q ss_pred eeeecCCceEEEEEecCCc-eEEe-cCCCccCCCcEEEEccCh
Q 044014 9 INIIPSNETLLDLEPFNRM-WHLS-ENGESCGQFDVIIIARNG 49 (127)
Q Consensus 9 ~~~~~~~t~V~~l~~~~~~-W~L~-~~g~~~G~FD~VVvA~Pa 49 (127)
+.++ +++|.+++.++++ |.+. .+|+.. .+|.||+|+=.
T Consensus 84 v~i~--~~~v~~i~~~~~~v~~v~~~~g~~i-~a~~VV~A~G~ 123 (232)
T 2cul_A 84 LHLF--QATATGLLLEGNRVVGVRTWEGPPA-RGEKVVLAVGS 123 (232)
T ss_dssp EEEE--ECCEEEEEEETTEEEEEEETTSCCE-ECSEEEECCTT
T ss_pred cEEE--EeEEEEEEEeCCEEEEEEECCCCEE-ECCEEEECCCC
Confidence 4556 3589999887665 5666 566433 46999999755
No 66
>3ntd_A FAD-dependent pyridine nucleotide-disulphide oxidoreductase; COA, persulfide reductase, rhodanese; HET: COA FAD; 1.99A {Shewanella loihica} PDB: 3nta_A* 3nt6_A*
Probab=27.60 E-value=43 Score=27.37 Aligned_cols=34 Identities=6% Similarity=0.289 Sum_probs=26.3
Q ss_pred CCceEEEEEecCCceEEe--cCCC-ccCCCcEEEEcc
Q 044014 14 SNETLLDLEPFNRMWHLS--ENGE-SCGQFDVIIIAR 47 (127)
Q Consensus 14 ~~t~V~~l~~~~~~W~L~--~~g~-~~G~FD~VVvA~ 47 (127)
.+++|.++++.++.+.+. .+|+ ..-.||.||+|+
T Consensus 77 ~~~~V~~id~~~~~v~~~~~~~g~~~~~~~d~lviAt 113 (565)
T 3ntd_A 77 VKHEVVAIDRAAKLVTVRRLLDGSEYQESYDTLLLSP 113 (565)
T ss_dssp TTEEEEEEETTTTEEEEEETTTCCEEEEECSEEEECC
T ss_pred ECCEEEEEECCCCEEEEEecCCCCeEEEECCEEEECC
Confidence 678999999999988886 2343 234689999996
No 67
>3o0h_A Glutathione reductase; ssgcid, structur genomics, seattle structural genomics center for infectious gluathione reductase, oxidoreductase; HET: FAD; 1.90A {Bartonella henselae}
Probab=26.89 E-value=58 Score=26.33 Aligned_cols=35 Identities=14% Similarity=0.293 Sum_probs=27.2
Q ss_pred CCceEEEEEecCCceEEe-cCCCccCCCcEEEEccCh
Q 044014 14 SNETLLDLEPFNRMWHLS-ENGESCGQFDVIIIARNG 49 (127)
Q Consensus 14 ~~t~V~~l~~~~~~W~L~-~~g~~~G~FD~VVvA~Pa 49 (127)
.+++|.+++.++++..+. .+|+.. .+|.||+|+.-
T Consensus 251 ~~~~V~~i~~~~~~v~v~~~~g~~i-~aD~Vi~A~G~ 286 (484)
T 3o0h_A 251 YEATVSQVQSTENCYNVVLTNGQTI-CADRVMLATGR 286 (484)
T ss_dssp SSCCEEEEEECSSSEEEEETTSCEE-EESEEEECCCE
T ss_pred eCCEEEEEEeeCCEEEEEECCCcEE-EcCEEEEeeCC
Confidence 467899999988888887 666443 47999999854
No 68
>2v3a_A Rubredoxin reductase; alkane degradation, NADH oxidoreductase, rubredoxin reductas NAD, flavoprotein, oxidoreductase; HET: FAD; 2.4A {Pseudomonas aeruginosa} PDB: 2v3b_A*
Probab=25.75 E-value=53 Score=25.49 Aligned_cols=35 Identities=17% Similarity=0.120 Sum_probs=26.5
Q ss_pred CCceEEEEEecCCceEEe-cCCCccCCCcEEEEccCh
Q 044014 14 SNETLLDLEPFNRMWHLS-ENGESCGQFDVIIIARNG 49 (127)
Q Consensus 14 ~~t~V~~l~~~~~~W~L~-~~g~~~G~FD~VVvA~Pa 49 (127)
.+++|.+++.++++..+. .+|+. -.+|.||+|+..
T Consensus 206 ~~~~v~~i~~~~~~~~v~~~~g~~-i~~d~vv~a~G~ 241 (384)
T 2v3a_A 206 LGPVLASLKKAGEGLEAHLSDGEV-IPCDLVVSAVGL 241 (384)
T ss_dssp ESCCEEEEEEETTEEEEEETTSCE-EEESEEEECSCE
T ss_pred eCCEEEEEEecCCEEEEEECCCCE-EECCEEEECcCC
Confidence 467899999888788887 66643 357999999843
No 69
>3itj_A Thioredoxin reductase 1; disulfide B flavoprotein, NADP, oxidoreductase, phosphoprotein, redox-A center; HET: FAD CIT; 2.40A {Saccharomyces cerevisiae} PDB: 3d8x_A*
Probab=25.69 E-value=60 Score=23.84 Aligned_cols=37 Identities=22% Similarity=0.275 Sum_probs=25.6
Q ss_pred eeeecCCceEEEEEecCCceEEe-c--CCCccCCCcEEEEcc
Q 044014 9 INIIPSNETLLDLEPFNRMWHLS-E--NGESCGQFDVIIIAR 47 (127)
Q Consensus 9 ~~~~~~~t~V~~l~~~~~~W~L~-~--~g~~~G~FD~VVvA~ 47 (127)
+.++ .++ |.+++..++.|.+. . ++...-.||.||+|+
T Consensus 99 v~i~-~~~-v~~i~~~~~~~~v~~~~~~~~~~~~~d~vvlAt 138 (338)
T 3itj_A 99 TEII-TET-VSKVDLSSKPFKLWTEFNEDAEPVTTDAIILAT 138 (338)
T ss_dssp CEEE-CSC-EEEEECSSSSEEEEETTCSSSCCEEEEEEEECC
T ss_pred CEEE-EeE-EEEEEEcCCEEEEEEEecCCCcEEEeCEEEECc
Confidence 3444 355 88999999999996 2 222334689999996
No 70
>2gag_B Heterotetrameric sarcosine oxidase beta-subunit; flavoenzyme, electron transfer, folate-ME enzyme, oxidoreductase; HET: NAD FAD FMN; 1.85A {Stenotrophomonas maltophilia} PDB: 2gah_B* 1x31_B* 1vrq_B* 3ad7_B* 3ad8_B* 3ad9_B* 3ada_B*
Probab=25.62 E-value=61 Score=24.70 Aligned_cols=34 Identities=12% Similarity=0.061 Sum_probs=25.2
Q ss_pred CCceEEEEEecCCc-eEEe-cCCCccCCCcEEEEccCh
Q 044014 14 SNETLLDLEPFNRM-WHLS-ENGESCGQFDVIIIARNG 49 (127)
Q Consensus 14 ~~t~V~~l~~~~~~-W~L~-~~g~~~G~FD~VVvA~Pa 49 (127)
.+++|.+++.++++ |.+. .+| . -.+|.||+|+-+
T Consensus 193 ~~~~v~~i~~~~~~~~~v~~~~g-~-~~a~~vV~a~G~ 228 (405)
T 2gag_B 193 QNCEVTGFIKDGEKVTGVKTTRG-T-IHAGKVALAGAG 228 (405)
T ss_dssp CSCCEEEEEESSSBEEEEEETTC-C-EEEEEEEECCGG
T ss_pred cCCeEEEEEEeCCEEEEEEeCCc-e-EECCEEEECCch
Confidence 57899999987654 8787 555 2 346899999865
No 71
>2e1m_B L-glutamate oxidase; L-amino acid oxidase, FAD, L-GOX, flavo oxidoreductase; HET: FAD; 2.80A {Streptomyces SP}
Probab=24.82 E-value=38 Score=23.69 Aligned_cols=37 Identities=8% Similarity=-0.074 Sum_probs=25.7
Q ss_pred CCcEEEEccChHhHHHHH--------------hccccceeeeeeeccCCCC
Q 044014 39 QFDVIIIARNGKCANRLL--------------RMQLSSIWTLLAASEDPRL 75 (127)
Q Consensus 39 ~FD~VVvA~Pa~QA~~Ll--------------~~~~~pcWalm~af~~pl~ 75 (127)
.+|.||+|+|..-...+. +..|.+.==+++.|++|.-
T Consensus 7 ~Ad~VIvTvP~~vL~~I~F~P~LP~~k~~Ai~~l~~g~~~Kv~l~f~~~FW 57 (130)
T 2e1m_B 7 TGDLAIVTIPFSSLRFVKVTPPFSYKKRRAVIETHYDQATKVLLEFSRRWW 57 (130)
T ss_dssp EESEEEECSCHHHHTTSEEESCCCHHHHHHHHHCCEECEEEEEEEESSCGG
T ss_pred EcCEEEEcCCHHHHhcCcCCCCCCHHHHHHHHhCCCcceeEEEEEECCCCC
Confidence 369999999988755432 3456666667788888754
No 72
>1fl2_A Alkyl hydroperoxide reductase subunit F; reactive oxygen, FAD, disulphi oxidoreductase, oxidoreductase; HET: FAD; 1.90A {Escherichia coli} SCOP: c.3.1.5 c.3.1.5
Probab=24.17 E-value=63 Score=23.65 Aligned_cols=33 Identities=18% Similarity=0.270 Sum_probs=24.1
Q ss_pred CCceEEEEEecC---CceEEe-cCCCccCCCcEEEEcc
Q 044014 14 SNETLLDLEPFN---RMWHLS-ENGESCGQFDVIIIAR 47 (127)
Q Consensus 14 ~~t~V~~l~~~~---~~W~L~-~~g~~~G~FD~VVvA~ 47 (127)
.+++|..++++. +.|.+. .+|+. -.||.||+|+
T Consensus 75 ~~~~v~~i~~~~~~~~~~~v~~~~g~~-~~~~~lv~At 111 (310)
T 1fl2_A 75 DSQSASKLIPAAVEGGLHQIETASGAV-LKARSIIVAT 111 (310)
T ss_dssp CSCCEEEEECCSSTTCCEEEEETTSCE-EEEEEEEECC
T ss_pred ccCEEEEEEecccCCceEEEEECCCCE-EEeCEEEECc
Confidence 467888887763 379997 65643 3579999987
No 73
>3s5w_A L-ornithine 5-monooxygenase; class B flavin dependent N-hydroxylating monooxygenase, CLAS flavin dependent monooxygenase N-hydroxylating; HET: FAD ONH NAP; 1.90A {Pseudomonas aeruginosa} PDB: 3s61_A*
Probab=24.14 E-value=48 Score=26.24 Aligned_cols=36 Identities=14% Similarity=0.333 Sum_probs=24.7
Q ss_pred cCCceEEEEEec---CCce--EEe-cCCC--c-cCCCcEEEEccC
Q 044014 13 PSNETLLDLEPF---NRMW--HLS-ENGE--S-CGQFDVIIIARN 48 (127)
Q Consensus 13 ~~~t~V~~l~~~---~~~W--~L~-~~g~--~-~G~FD~VVvA~P 48 (127)
-.+++|.++++. ++.| .+. .+|+ . .-.||.||+|+=
T Consensus 145 ~~~~~V~~i~~~~~~~~~~~~~V~~~~g~g~~~~~~~d~lVlAtG 189 (463)
T 3s5w_A 145 RYGEEVLRIEPMLSAGQVEALRVISRNADGEELVRTTRALVVSPG 189 (463)
T ss_dssp EESEEEEEEEEEEETTEEEEEEEEEEETTSCEEEEEESEEEECCC
T ss_pred EeCCEEEEEEEecCCCceEEEEEEEecCCCceEEEEeCEEEECCC
Confidence 357889999988 6777 444 3432 1 335899999973
No 74
>3cty_A Thioredoxin reductase; FAD, oxidoreductase, flavin, flavoprotein; HET: FAD; 2.35A {Thermoplasma acidophilum}
Probab=23.77 E-value=81 Score=23.27 Aligned_cols=31 Identities=10% Similarity=0.177 Sum_probs=23.2
Q ss_pred ceEEEEEecCCceEEecCCCccCCCcEEEEcc
Q 044014 16 ETLLDLEPFNRMWHLSENGESCGQFDVIIIAR 47 (127)
Q Consensus 16 t~V~~l~~~~~~W~L~~~g~~~G~FD~VVvA~ 47 (127)
++|.+++..++.|.+..+++. -.||.||+|+
T Consensus 92 ~~v~~i~~~~~~~~v~~~~~~-~~~~~li~At 122 (319)
T 3cty_A 92 VEVRSIKKTQGGFDIETNDDT-YHAKYVIITT 122 (319)
T ss_dssp CCEEEEEEETTEEEEEESSSE-EEEEEEEECC
T ss_pred eeEEEEEEeCCEEEEEECCCE-EEeCEEEECC
Confidence 478889888888988744433 3579999996
No 75
>3iwa_A FAD-dependent pyridine nucleotide-disulphide oxidoreductase; structural genomics, PSI-2, protein structur initiative; 2.30A {Desulfovibrio vulgaris}
Probab=23.60 E-value=59 Score=26.08 Aligned_cols=34 Identities=12% Similarity=0.237 Sum_probs=25.9
Q ss_pred CCceEEEEEecCCceEEec--CCC-ccCCCcEEEEcc
Q 044014 14 SNETLLDLEPFNRMWHLSE--NGE-SCGQFDVIIIAR 47 (127)
Q Consensus 14 ~~t~V~~l~~~~~~W~L~~--~g~-~~G~FD~VVvA~ 47 (127)
.+++|.++++.++.+.+.. +|+ ..-.||.||+|+
T Consensus 85 ~~~~V~~id~~~~~v~~~~~~~g~~~~~~~d~lviAt 121 (472)
T 3iwa_A 85 VETRAHAIDRAAHTVEIENLRTGERRTLKYDKLVLAL 121 (472)
T ss_dssp CSEEEEEEETTTTEEEEEETTTCCEEEEECSEEEECC
T ss_pred ECCEEEEEECCCCEEEEeecCCCCEEEEECCEEEEeC
Confidence 5789999999998888863 343 234689999986
No 76
>3oc4_A Oxidoreductase, pyridine nucleotide-disulfide FAM; structural genomics, PSI-2, protein structure initiative; HET: FAD; 2.60A {Enterococcus faecalis}
Probab=22.34 E-value=55 Score=26.12 Aligned_cols=34 Identities=15% Similarity=0.293 Sum_probs=25.3
Q ss_pred CCceEEEEEecCCceEEe-cCCCccCCCcEEEEcc
Q 044014 14 SNETLLDLEPFNRMWHLS-ENGESCGQFDVIIIAR 47 (127)
Q Consensus 14 ~~t~V~~l~~~~~~W~L~-~~g~~~G~FD~VVvA~ 47 (127)
.+++|.++++..+.+.+. ..+...-.||.||+|+
T Consensus 77 ~~~~V~~id~~~~~v~v~~~~~~~~~~~d~lviAt 111 (452)
T 3oc4_A 77 LNREVVAMDVENQLIAWTRKEEQQWYSYDKLILAT 111 (452)
T ss_dssp CSCEEEEEETTTTEEEEEETTEEEEEECSEEEECC
T ss_pred ECCEEEEEECCCCEEEEEecCceEEEEcCEEEECC
Confidence 678899999999988885 2222234589999986
No 77
>1xdi_A RV3303C-LPDA; reductase, FAD, NAD, NADP, unkno function; HET: FAD; 2.81A {Mycobacterium tuberculosis} SCOP: c.3.1.5 d.87.1.1
Probab=22.26 E-value=78 Score=25.65 Aligned_cols=34 Identities=6% Similarity=0.011 Sum_probs=25.7
Q ss_pred CCceEEEEEecCCceEEe-cCCCccCCCcEEEEccC
Q 044014 14 SNETLLDLEPFNRMWHLS-ENGESCGQFDVIIIARN 48 (127)
Q Consensus 14 ~~t~V~~l~~~~~~W~L~-~~g~~~G~FD~VVvA~P 48 (127)
.+++|.+++.++++..+. .+|+. -.+|.||+|+-
T Consensus 242 ~~~~V~~i~~~~~~v~v~~~~g~~-i~aD~Vv~a~G 276 (499)
T 1xdi_A 242 KNARAASVTRTGAGVLVTMTDGRT-VEGSHALMTIG 276 (499)
T ss_dssp TTCCEEEEEECSSSEEEEETTSCE-EEESEEEECCC
T ss_pred eCCEEEEEEEeCCEEEEEECCCcE-EEcCEEEECCC
Confidence 578999999887777776 55543 35799999984
No 78
>2yqu_A 2-oxoglutarate dehydrogenase E3 component; lipoamide dehydrogenase, 2-oxoglutarate dehydrogenase comple pyruvate dehydrogenase complex; HET: FAD; 1.70A {Thermus thermophilus} PDB: 2eq7_A*
Probab=21.54 E-value=79 Score=25.15 Aligned_cols=38 Identities=18% Similarity=0.239 Sum_probs=27.7
Q ss_pred eeeecCCceEEEEEecCCceEEe-cCCCccCCCcEEEEccC
Q 044014 9 INIIPSNETLLDLEPFNRMWHLS-ENGESCGQFDVIIIARN 48 (127)
Q Consensus 9 ~~~~~~~t~V~~l~~~~~~W~L~-~~g~~~G~FD~VVvA~P 48 (127)
|+++ .+++|.+++.++++..+. .+|+. -.+|.||+|+-
T Consensus 223 v~i~-~~~~V~~i~~~~~~v~v~~~~g~~-i~~D~vv~A~G 261 (455)
T 2yqu_A 223 LTIR-TGVRVTAVVPEAKGARVELEGGEV-LEADRVLVAVG 261 (455)
T ss_dssp CEEE-CSCCEEEEEEETTEEEEEETTSCE-EEESEEEECSC
T ss_pred CEEE-ECCEEEEEEEeCCEEEEEECCCeE-EEcCEEEECcC
Confidence 3444 567899999888888776 55543 35799999983
No 79
>3axb_A Putative oxidoreductase; dinucleotide-binding fold; HET: FAD; 1.92A {Aeropyrum pernix} PDB: 3vqr_A*
Probab=20.52 E-value=1.5e+02 Score=23.13 Aligned_cols=57 Identities=12% Similarity=0.032 Sum_probs=35.1
Q ss_pred CCceEEEEEe---------------cCCc-eEEe-cCCCccC-CCcEEEEccChHhHHHHH-----hccccceeeeeeec
Q 044014 14 SNETLLDLEP---------------FNRM-WHLS-ENGESCG-QFDVIIIARNGKCANRLL-----RMQLSSIWTLLAAS 70 (127)
Q Consensus 14 ~~t~V~~l~~---------------~~~~-W~L~-~~g~~~G-~FD~VVvA~Pa~QA~~Ll-----~~~~~pcWalm~af 70 (127)
.+++|.+++. .+++ |.+. .+| ... .+|.||+|+-+- +..|+ ...+.|.---++.+
T Consensus 200 ~~~~V~~i~~~~~~~~~~~~~~~~~~~~~v~~V~t~~g-~i~~~Ad~VV~AtG~~-s~~l~~~~g~~~~~~p~rg~~~~~ 277 (448)
T 3axb_A 200 FGRRVVGVELKPRVELGIEGEPLPWQEARASAAVLSDG-TRVEVGEKLVVAAGVW-SNRLLNPLGIDTFSRPKKRMVFRV 277 (448)
T ss_dssp ESCCEEEEEEEESSCCCCTTSSCTTSCEEEEEEEETTS-CEEEEEEEEEECCGGG-HHHHHGGGTCCCSEEEEEEEEEEE
T ss_pred cCCeEEEEEecccccccccccccccCCCceEEEEeCCC-EEeecCCEEEECCCcC-HHHHHHHcCCCCcccccceEEEEe
Confidence 4678999987 4444 6776 555 321 469999998653 55565 23455654455555
Q ss_pred cC
Q 044014 71 ED 72 (127)
Q Consensus 71 ~~ 72 (127)
+.
T Consensus 278 ~~ 279 (448)
T 3axb_A 278 SA 279 (448)
T ss_dssp EC
T ss_pred CC
Confidence 53
No 80
>3r9u_A Thioredoxin reductase; structural genomics, center for structural genomics of infec diseases, csgid, thioredoxin-disulfide reductase, FAD; HET: FAD; 2.36A {Campylobacter jejuni}
Probab=20.30 E-value=63 Score=23.45 Aligned_cols=34 Identities=9% Similarity=0.048 Sum_probs=23.6
Q ss_pred eeeecCCceEEEEEecC--CceE--EecCCCccCCCcEEEEcc
Q 044014 9 INIIPSNETLLDLEPFN--RMWH--LSENGESCGQFDVIIIAR 47 (127)
Q Consensus 9 ~~~~~~~t~V~~l~~~~--~~W~--L~~~g~~~G~FD~VVvA~ 47 (127)
++++-. +|.++ .++ +.|. +..++ .-.||.||+|+
T Consensus 77 v~~~~~--~v~~i-~~~~~~~~~v~~~~~~--~~~~d~lvlAt 114 (315)
T 3r9u_A 77 LKHEMV--GVEQI-LKNSDGSFTIKLEGGK--TELAKAVIVCT 114 (315)
T ss_dssp CEEECC--CEEEE-EECTTSCEEEEETTSC--EEEEEEEEECC
T ss_pred cEEEEE--EEEEE-ecCCCCcEEEEEecCC--EEEeCEEEEee
Confidence 444433 78888 777 8899 54434 45689999997
No 81
>3ego_A Probable 2-dehydropantoate 2-reductase; structural genomics, PANE, unknown function, cytoplasm, NADP, oxidoreductase; 1.90A {Bacillus subtilis}
Probab=20.04 E-value=74 Score=24.34 Aligned_cols=21 Identities=10% Similarity=0.317 Sum_probs=18.0
Q ss_pred ccCCCcEEEEccChHhHHHHH
Q 044014 36 SCGQFDVIIIARNGKCANRLL 56 (127)
Q Consensus 36 ~~G~FD~VVvA~Pa~QA~~Ll 56 (127)
..+.+|.||+++|+.|...++
T Consensus 64 ~~~~~D~vilavK~~~~~~~l 84 (307)
T 3ego_A 64 INSDFDLLVVTVKQHQLQSVF 84 (307)
T ss_dssp CCSCCSEEEECCCGGGHHHHH
T ss_pred ccCCCCEEEEEeCHHHHHHHH
Confidence 456799999999999988777
Done!