BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= 044015
(478 letters)
Database: swissprot
539,616 sequences; 191,569,459 total letters
Searching..................................................done
>sp|Q6Y288|B3GLT_HUMAN Beta-1,3-glucosyltransferase OS=Homo sapiens GN=B3GALTL PE=1 SV=2
Length = 498
Score = 43.9 bits (102), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 34/106 (32%), Positives = 45/106 (42%), Gaps = 7/106 (6%)
Query: 190 WFVLGDDDTVFFLENLVTVLGRYDHNQMYYIGGNSESVEQDVIHSYTMAYGGGGFAISYP 249
W V+ DDDT+ + L +L YD + ++G Y+ GGGG S
Sbjct: 344 WLVIVDDDTLISISRLQHLLSCYDSGEPVFLG--ERYGYGLGTGGYSYITGGGGMVFS-- 399
Query: 250 LAAELVRVLDGCIDRYASFYGSDQKVQG-CMAEIGVPVTKELGFHQ 294
E VR L R S D V G C + +G+PVT FHQ
Sbjct: 400 --REAVRRLLASKCRCYSNDAPDDMVLGMCFSGLGIPVTHSPLFHQ 443
Score = 36.2 bits (82), Expect = 0.63, Method: Compositional matrix adjust.
Identities = 19/78 (24%), Positives = 35/78 (44%), Gaps = 9/78 (11%)
Query: 190 WFVLGDDDTVFFLENLVTVLGRYDHNQMYYIGGNSESVEQDVIHSYTMAYG--------- 240
W +++T + L+ L RYD ++ +++G E +IH Y +
Sbjct: 127 WIFFCEEETRIQIPKLLETLRRYDPSKEWFLGKALHDEEATIIHHYAFSENPTVFKYPDF 186
Query: 241 GGGFAISYPLAAELVRVL 258
G+A+S PL +L + L
Sbjct: 187 AAGWALSIPLVNKLTKRL 204
>sp|Q8BHT6|B3GLT_MOUSE Beta-1,3-glucosyltransferase OS=Mus musculus GN=B3galtl PE=2 SV=3
Length = 489
Score = 43.5 bits (101), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 30/107 (28%), Positives = 46/107 (42%), Gaps = 5/107 (4%)
Query: 188 VRWFVLGDDDTVFFLENLVTVLGRYDHNQMYYIGGNSESVEQDVIHSYTMAYGGGGFAIS 247
+ W V+ DDDT+ + L +L YD + ++G Y+ GGGG S
Sbjct: 333 ISWLVIVDDDTLISISRLRHLLSCYDSSDPVFLGERYGYGLGTG--GYSYVTGGGGMVFS 390
Query: 248 YPLAAELVRVLDGCIDRYASFYGSDQKVQGCMAEIGVPVTKELGFHQ 294
+ R+L Y++ D + C + +GVPVT FHQ
Sbjct: 391 ---REAIRRLLVSSCRCYSNDAPDDMVLGMCFSGLGVPVTHSPLFHQ 434
Score = 34.7 bits (78), Expect = 1.5, Method: Compositional matrix adjust.
Identities = 19/78 (24%), Positives = 35/78 (44%), Gaps = 9/78 (11%)
Query: 190 WFVLGDDDTVFFLENLVTVLGRYDHNQMYYIGGNSESVEQDVIHSYTMAYG--------- 240
W +++T + L+ L RYD ++ +++G E +IH Y +
Sbjct: 118 WIFFCEEETRLQIPRLLDTLRRYDPSKEWFLGKALYDEESTIIHHYAFSENPTVFKYPDF 177
Query: 241 GGGFAISYPLAAELVRVL 258
G+A+S PL +L + L
Sbjct: 178 AAGWALSIPLVNKLAKRL 195
>sp|Q18515|C1GLT_CAEEL Glycoprotein-N-acetylgalactosamine 3-beta-galactosyltransferase 1
OS=Caenorhabditis elegans GN=C38H2.2 PE=2 SV=2
Length = 389
Score = 42.0 bits (97), Expect = 0.010, Method: Compositional matrix adjust.
Identities = 48/217 (22%), Positives = 81/217 (37%), Gaps = 34/217 (15%)
Query: 114 DDRRHYCELWWKPGLTRGFVWLDEKPNKTWPATSPPYKVSQDTSRFQYTSWYGTRSAIRI 173
D R + + W + +V++ + + PA ++ + S + W T+ A
Sbjct: 118 DKRAKHVKATWAKRCNK-YVFMSSEEDAELPA------INLNVSEGRDYLWAKTKGAF-- 168
Query: 174 ARIIKETFRLGLGDVRWFVLGDDDTVFFLENLVTVLGRYDHNQMYYIGGNSESVEQDVIH 233
K + L D WF+ DDDT +ENL +L + ++ + G + Q H
Sbjct: 169 ----KYIYDHHLNDYDWFLKADDDTYVVMENLRFMLLAHSPDEPIHFGCKFKPFTQGGYH 224
Query: 234 SYTMAYGGGGFAISYPLAAELVRVL--DGCIDRYASFYGSDQKVQGCMAEIGVPVTKELG 291
S GG G+ +S + + V D + D ++ C+ ++GV
Sbjct: 225 S-----GGAGYVLSREALKKFIEVALPDKSLCSQNHGGAEDAEMGKCLEKVGVKA----- 274
Query: 292 FHQIDIRGDPYGLLAAHPLSPIVSLHHLD--YVLPIF 326
GD H P V HHL +V P F
Sbjct: 275 -------GDSRDADGHHRFMPFVPEHHLSPGHVDPKF 304
>sp|Q9NS00|C1GLT_HUMAN Glycoprotein-N-acetylgalactosamine 3-beta-galactosyltransferase 1
OS=Homo sapiens GN=C1GALT1 PE=1 SV=1
Length = 363
Score = 42.0 bits (97), Expect = 0.012, Method: Compositional matrix adjust.
Identities = 55/245 (22%), Positives = 88/245 (35%), Gaps = 41/245 (16%)
Query: 78 SSQKKLLTRQNTTLYNEPKTNVSHIVFGIGGSANTWDDRRHYCELWWKPGLTRGFVWLDE 137
SSQ K +NT + V + + + G N +H W + +++
Sbjct: 69 SSQHK---DENTDIAENLYQKVRILCWVMTGPQNLEKKAKHVKATWAQ--RCNKVLFMSS 123
Query: 138 KPNKTWPATSPPYKVSQDTSRFQYTSWYGTRSAIRIARIIKETFRLGLGDVRWFVLGDDD 197
+ NK +PA K +D ++ I+ + + E + L D WF+ DDD
Sbjct: 124 EENKDFPAVGLKTKEGRDQLYWK---------TIKAFQYVHEHY---LEDADWFLKADDD 171
Query: 198 TVFFLENLVTVLGRYDHNQMYYIGGNSES-VEQDVIHSYTMAYGGGGFAISYPLAAELVR 256
T L+NL +L +YD + Y G + V+Q + GG G+ +S V
Sbjct: 172 TYVILDNLRWLLSKYDPEEPIYFGRRFKPYVKQGYMS------GGAGYVLSKEALKRFVD 225
Query: 257 VL--DGCIDRYASFYGSDQKVQGCMAEIGVPVTKELGFHQIDIRGDPYGLLAAHPLSPIV 314
D C + D + CM + V GD + P V
Sbjct: 226 AFKTDKCTHSSSI---EDLALGRCMEIMNVEA------------GDSRDTIGKETFHPFV 270
Query: 315 SLHHL 319
HHL
Sbjct: 271 PEHHL 275
>sp|O12971|LFNG_CHICK Beta-1,3-N-acetylglucosaminyltransferase lunatic fringe OS=Gallus
gallus GN=LFNG PE=2 SV=1
Length = 363
Score = 42.0 bits (97), Expect = 0.012, Method: Compositional matrix adjust.
Identities = 32/102 (31%), Positives = 42/102 (41%), Gaps = 25/102 (24%)
Query: 189 RWFVLGDDDTVFFLENLVTVLGRYDHNQMYYIGGNS--------ESVEQDVIH--SYTMA 238
+WF DDD + LV +L Y H Q YIG S E + ++ +H + A
Sbjct: 178 KWFCHVDDDNYVNVRTLVKLLSSYPHTQDIYIGKPSLDRPIQATERISENKMHPVHFWFA 237
Query: 239 YGGGGFAISYPLA---------------AELVRVLDGCIDRY 265
GG GF IS LA AE +R+ D C Y
Sbjct: 238 TGGAGFCISRGLALKMSPWASGGHFMSTAEKIRLPDDCTIGY 279
>sp|P79948|LFNG_XENLA Beta-1,3-N-acetylglucosaminyltransferase lunatic fringe OS=Xenopus
laevis GN=lfng PE=2 SV=1
Length = 375
Score = 41.2 bits (95), Expect = 0.016, Method: Compositional matrix adjust.
Identities = 32/104 (30%), Positives = 42/104 (40%), Gaps = 25/104 (24%)
Query: 187 DVRWFVLGDDDTVFFLENLVTVLGRYDHNQMYYIGGNS--------ESVEQDVIH--SYT 236
D +WF DDD + LV +L RY H YIG S E + + + ++
Sbjct: 188 DKKWFCHVDDDNYVNVRTLVKLLSRYSHTNDIYIGKPSLDRPIQATERISESNMRPVNFW 247
Query: 237 MAYGGGGFAISYPLA---------------AELVRVLDGCIDRY 265
A GG GF IS LA AE +R+ D C Y
Sbjct: 248 FATGGAGFCISRGLALKMSPWASGGHFMNTAEKIRLPDDCTIGY 291
>sp|Q2KJ92|LFNG_BOVIN Beta-1,3-N-acetylglucosaminyltransferase lunatic fringe OS=Bos
taurus GN=LFNG PE=2 SV=1
Length = 380
Score = 40.8 bits (94), Expect = 0.026, Method: Compositional matrix adjust.
Identities = 37/130 (28%), Positives = 51/130 (39%), Gaps = 36/130 (27%)
Query: 189 RWFVLGDDDTVFFLENLVTVLGRYDHNQMYYIGGNS--------ESVEQDVIH--SYTMA 238
+WF DDD + L+ +LG Y H Q Y+G S E V ++ + + A
Sbjct: 195 KWFCHVDDDNYVNVRALLRLLGSYPHTQDVYLGKPSLDRPIQATERVSENKVRPVHFWFA 254
Query: 239 YGGGGFAISYPLA---------------AELVRVLDGCIDRYASFYGSDQKVQGCMAEIG 283
GG GF IS LA AE +R+ D C Y A +G
Sbjct: 255 TGGAGFCISRGLALKMSPWASGGHFMSTAERIRLPDDCTIGYI-----------VEALLG 303
Query: 284 VPVTKELGFH 293
VP+ + FH
Sbjct: 304 VPLVRCGLFH 313
>sp|Q9JJ05|C1GLT_RAT Glycoprotein-N-acetylgalactosamine 3-beta-galactosyltransferase 1
OS=Rattus norvegicus GN=C1galt1 PE=1 SV=1
Length = 363
Score = 40.0 bits (92), Expect = 0.038, Method: Compositional matrix adjust.
Identities = 44/138 (31%), Positives = 57/138 (41%), Gaps = 24/138 (17%)
Query: 185 LGDVRWFVLGDDDTVFFLENLVTVLGRYDHNQMYYIGGNSES-VEQDVIHSYTMAYGGGG 243
L D WF+ DDDT L+NL +L +Y+ Q Y G + V+Q + GG G
Sbjct: 159 LEDADWFMKADDDTYVILDNLRWLLSKYNPEQPIYFGRRFKPYVKQGYMS------GGAG 212
Query: 244 FAISYPLAAELVRVLDGCIDRYASFYGS--DQKVQGCMAEIGVPVTKELGFHQIDIRGDP 301
+ +S L R +D + S D + CM I V E G D R DP
Sbjct: 213 YVLS---KEALRRFVDAFKTEKCTHSSSIEDLALGRCMEIIKV----EAG----DSR-DP 260
Query: 302 YGLLAAHPLSPIVSLHHL 319
G HP P HHL
Sbjct: 261 TGKETFHPFVP---EHHL 275
>sp|Q9YHB3|RFNG_NOTVI Beta-1,3-N-acetylglucosaminyltransferase radical fringe
OS=Notophthalmus viridescens GN=RFNG PE=2 SV=1
Length = 396
Score = 39.7 bits (91), Expect = 0.051, Method: Compositional matrix adjust.
Identities = 34/102 (33%), Positives = 43/102 (42%), Gaps = 25/102 (24%)
Query: 189 RWFVLGDDDTVFFLENLVTVLGRYDHNQMYYIGGNS--------ESVEQDVIHS--YTMA 238
+WF DDD L +L +L + H+Q Y+G S E V+ D S + A
Sbjct: 211 KWFCHVDDDNYVNLFSLRHLLASFSHSQDVYLGRPSLDHPIEAIERVKSDGSASVRFWFA 270
Query: 239 YGGGGFAISYPLA---------------AELVRVLDGCIDRY 265
GG GF IS LA AELVR+ D C Y
Sbjct: 271 TGGAGFCISRGLALKMSPWASMGNFITTAELVRLPDDCTIGY 312
>sp|Q0VC84|C1GLT_BOVIN Glycoprotein-N-acetylgalactosamine 3-beta-galactosyltransferase 1
OS=Bos taurus GN=C1GALT1 PE=2 SV=1
Length = 368
Score = 39.3 bits (90), Expect = 0.077, Method: Compositional matrix adjust.
Identities = 50/236 (21%), Positives = 85/236 (36%), Gaps = 38/236 (16%)
Query: 87 QNTTLYNEPKTNVSHIVFGIGGSANTWDDRRHYCELWWKPGLTRGFVWLDEKPNKTWPAT 146
+NT + ++ V + + + G N +H W + +++ + NK +PA
Sbjct: 75 ENTDIADKLYQKVKILCWVMTGPQNLEKKAKHVKATWAQ--RCNKVLFMSSEENKDFPAV 132
Query: 147 SPPYKVSQDTSRFQYTSWYGTRSAIRIARIIKETFRLGLGDVRWFVLGDDDTVFFLENLV 206
+ +D ++ I+ + + + + L D WF+ DDDT L+NL
Sbjct: 133 GLKTREGRDQLYWK---------TIKAFQYVHDHY---LEDADWFMKADDDTYVILDNLR 180
Query: 207 TVLGRYDHNQMYYIGGNSES-VEQDVIHSYTMAYGGGGFAISYPLAAELVRVL--DGCID 263
+L +Y+ + Y G + V+Q + GG G+ +S V D C
Sbjct: 181 WLLSKYNPEEPIYFGRRFKPYVKQGYMS------GGAGYVLSKEALKRFVEAFKTDKCT- 233
Query: 264 RYASFYGSDQKVQGCMAEIGVPVTKELGFHQIDIRGDPYGLLAAHPLSPIVSLHHL 319
S D + CM I V GD P V HHL
Sbjct: 234 --HSSSIEDLALGRCMEIINVEA------------GDSRDTTGKETFHPFVPEHHL 275
>sp|Q6GNL1|C1GLT_XENLA Glycoprotein-N-acetylgalactosamine 3-beta-galactosyltransferase 1
OS=Xenopus laevis GN=c1galt1 PE=2 SV=1
Length = 360
Score = 37.4 bits (85), Expect = 0.23, Method: Compositional matrix adjust.
Identities = 35/137 (25%), Positives = 49/137 (35%), Gaps = 22/137 (16%)
Query: 185 LGDVRWFVLGDDDTVFFLENLVTVLGRYDHNQMYYIGGNSESVEQDVIHSYTMAYGGGGF 244
L + WF DDDT ++NL +L Y +Q Y G + + S GG G+
Sbjct: 147 LNETEWFFKADDDTYVIMDNLRWMLSNYTADQPIYFGKRFKPYIKQGYMS-----GGAGY 201
Query: 245 AISYPLAAELVRVLDGCIDRYASFYGS--DQKVQGCMAEIGVPVTKELGFHQIDIRGDPY 302
+S L+R ++G S D + CM +GV I GD
Sbjct: 202 VLS---REALIRFVEGFRTGVCKHTTSTEDVAIGNCMQLMGV------------IAGDSR 246
Query: 303 GLLAAHPLSPIVSLHHL 319
P HHL
Sbjct: 247 DTEKRETFHPFPPEHHL 263
>sp|Q9JJ06|C1GLT_MOUSE Glycoprotein-N-acetylgalactosamine 3-beta-galactosyltransferase 1
OS=Mus musculus GN=C1galt1 PE=1 SV=1
Length = 363
Score = 37.4 bits (85), Expect = 0.26, Method: Compositional matrix adjust.
Identities = 35/136 (25%), Positives = 50/136 (36%), Gaps = 20/136 (14%)
Query: 185 LGDVRWFVLGDDDTVFFLENLVTVLGRYDHNQMYYIGGNSES-VEQDVIHSYTMAYGGGG 243
L D WF+ DDDT ++NL +L +Y+ Q Y G + V+Q + GG G
Sbjct: 159 LEDADWFMKADDDTYVIVDNLRWLLSKYNPEQPIYFGRRFKPYVKQGYMS------GGAG 212
Query: 244 FAISYPLAAELVRVLDGCIDRYASFYGSDQKVQGCMAEIGVPVTKELGFHQIDIRGDPYG 303
+ +S V ++S D + CM I V GD
Sbjct: 213 YVLSKEALRRFVNAFKTEKCTHSSSI-EDLALGRCMEIINVEA------------GDSRD 259
Query: 304 LLAAHPLSPIVSLHHL 319
+ P V HHL
Sbjct: 260 TIGKETFHPFVPEHHL 275
>sp|Q8JHF2|LFNG_DANRE Beta-1,3-N-acetylglucosaminyltransferase lunatic fringe OS=Danio
rerio GN=lfng PE=2 SV=2
Length = 374
Score = 37.4 bits (85), Expect = 0.28, Method: Compositional matrix adjust.
Identities = 32/102 (31%), Positives = 42/102 (41%), Gaps = 25/102 (24%)
Query: 189 RWFVLGDDDTVFFLENLVTVLGRYDHNQMYYIGGNS-----ESVEQDVIH-----SYTMA 238
+WF DDD + LV +L Y H Q YIG S E+ E+ + ++ A
Sbjct: 189 KWFCHVDDDNYVNTKTLVKLLSNYPHTQDMYIGKPSLDRPIEATERLGDNKMRPVNFWFA 248
Query: 239 YGGGGFAISYPLA---------------AELVRVLDGCIDRY 265
GG GF IS LA AE +R+ D C Y
Sbjct: 249 TGGAGFCISRGLALKMSPWASGGHFMNTAEKIRLPDDCTIGY 290
>sp|Q08BL3|C1GTA_DANRE Glycoprotein-N-acetylgalactosamine 3-beta-galactosyltransferase 1-A
OS=Danio rerio GN=c1galt1a PE=2 SV=1
Length = 408
Score = 37.0 bits (84), Expect = 0.33, Method: Compositional matrix adjust.
Identities = 32/135 (23%), Positives = 51/135 (37%), Gaps = 22/135 (16%)
Query: 187 DVRWFVLGDDDTVFFLENLVTVLGRYDHNQMYYIGGNSESVEQDVIHSYTMAYGGGGFAI 246
+ WF+ DDDT ++NL +L Y Q Y G + + S GG G+ +
Sbjct: 166 EADWFLKADDDTFVVVDNLRWILSNYTPEQPIYFGKRFKPYTKQGYMS-----GGAGYVL 220
Query: 247 SYPLAAELVRVLDGCIDRYASFYG--SDQKVQGCMAEIGVPVTKELGFHQIDIRGDPYGL 304
S L R ++G + + D + C+ ++GV + GD
Sbjct: 221 S---KEALRRFVEGFSTKVCTHTTPVEDLAMGQCLEKMGV------------LAGDSRDS 265
Query: 305 LAAHPLSPIVSLHHL 319
L P + HHL
Sbjct: 266 LHRETFHPFIPEHHL 280
>sp|Q7SYI5|C1GTB_DANRE Glycoprotein-N-acetylgalactosamine 3-beta-galactosyltransferase 1-B
OS=Danio rerio GN=c1galt1b PE=2 SV=1
Length = 374
Score = 36.2 bits (82), Expect = 0.51, Method: Compositional matrix adjust.
Identities = 35/141 (24%), Positives = 53/141 (37%), Gaps = 24/141 (17%)
Query: 187 DVRWFVLGDDDTVFFLENLVTVLGRYDHNQMYYIGGNSES-VEQDVIHSYTMAYGGGGFA 245
+ WF+ DDDT ++NL +L R+ Y G + V+Q + GG G+
Sbjct: 161 EADWFLKADDDTYVIVDNLRWILARHSPEDPVYFGRRFKPYVKQGYMS------GGAGYV 214
Query: 246 ISYPLAAELVRVLDGCIDRYASFYGS--DQKVQGCMAEIGVPVTKELGFHQIDIRGDPYG 303
+S L R ++G + + S D + CM +IGV GD
Sbjct: 215 LS---KEALRRFVEGFRTKVCTHTTSVEDLAMGQCMEKIGVKA------------GDSRD 259
Query: 304 LLAAHPLSPIVSLHHLDYVLP 324
+ P V HL P
Sbjct: 260 TMQRETFHPFVPESHLTGTFP 280
>sp|Q5F3G7|C1GLT_CHICK Glycoprotein-N-acetylgalactosamine 3-beta-galactosyltransferase 1
OS=Gallus gallus GN=C1GALT1 PE=2 SV=1
Length = 366
Score = 33.9 bits (76), Expect = 3.0, Method: Compositional matrix adjust.
Identities = 49/233 (21%), Positives = 89/233 (38%), Gaps = 36/233 (15%)
Query: 28 MDIVSLFMKSALFIFTVISIYLLFFYALSNKLH---YSTSNCPQSQ----CDTNRL---- 76
M++++ SA+ F YLLF L ++ + N P Q D N+L
Sbjct: 8 MNLLTFSFGSAIGFFLC---YLLFSMILEEQVEIQPHILHNDPHGQHSEDTDNNQLQGQM 64
Query: 77 -LSSQKKLLTRQNTTLYNEPKTNVSHIVFGIGGSANTWDDRRHYCELWWKPGLTRGFVWL 135
++ +N + + V + + + G N RH W + +++
Sbjct: 65 NFNADSGQHRDENRNIADGLYEKVKILCWVMTGPQNLEKKARHVKATWAQ--RCNKILFM 122
Query: 136 DEKPNKTWPATSPPYKVSQDTSRFQYTSWYGTRSAIRIARIIKETFRLGLGDVRWFVLGD 195
+ NK +P K +D ++ I+ + + + + D WF+ D
Sbjct: 123 SSEENKDFPTVGLETKEGRDQLYWK---------TIKAFQYVYDHY---FDDADWFMKAD 170
Query: 196 DDTVFFLENLVTVLGRYDHNQMYYIGGNSES-VEQDVIHSYTMAYGGGGFAIS 247
DDT L+NL +L +Y Q Y G + V+Q + GG G+ +S
Sbjct: 171 DDTYVILDNLRWLLSKYSPEQPIYFGRRFKPYVKQGYMS------GGAGYVLS 217
>sp|Q00860|NU1M_MYTED NADH-ubiquinone oxidoreductase chain 1 OS=Mytilus edulis GN=ND1
PE=3 SV=2
Length = 305
Score = 33.1 bits (74), Expect = 5.5, Method: Compositional matrix adjust.
Identities = 15/50 (30%), Positives = 27/50 (54%), Gaps = 2/50 (4%)
Query: 228 EQDVIHSYTMAYGGGGFAISYPLAAELVRVLDGCIDRYASFYGSDQKVQG 277
E +++ Y + Y GGGFA+ + AE +L + A F+G ++ + G
Sbjct: 208 ESELVSGYNVEYSGGGFAVMF--IAEYSSILLSSVMSAAMFFGGNEALVG 255
>sp|O09010|LFNG_MOUSE Beta-1,3-N-acetylglucosaminyltransferase lunatic fringe OS=Mus
musculus GN=Lfng PE=1 SV=1
Length = 378
Score = 32.3 bits (72), Expect = 8.5, Method: Compositional matrix adjust.
Identities = 38/130 (29%), Positives = 50/130 (38%), Gaps = 36/130 (27%)
Query: 189 RWFVLGDDDTVFFLENLVTVLGRYDHNQMYYIGGNS-----ESVEQDVIHS-----YTMA 238
+WF DDD L L+ +L Y H Q YIG S ++ E+ H + A
Sbjct: 193 KWFCHVDDDNYVNLRALLRLLASYPHTQDVYIGKPSLDRPIQATERISEHKVRPVHFWFA 252
Query: 239 YGGGGFAISYPLA---------------AELVRVLDGCIDRYASFYGSDQKVQGCMAEIG 283
GG GF IS LA AE +R+ D C Y A +G
Sbjct: 253 TGGAGFCISRGLALKMGPWASGGHFMSTAERIRLPDDCTIGYI-----------VEALLG 301
Query: 284 VPVTKELGFH 293
VP+ + FH
Sbjct: 302 VPLIRSGLFH 311
>sp|Q24342|FNG_DROME Fringe glycosyltransferase OS=Drosophila melanogaster GN=fng PE=1
SV=1
Length = 412
Score = 32.3 bits (72), Expect = 8.8, Method: Compositional matrix adjust.
Identities = 43/195 (22%), Positives = 71/195 (36%), Gaps = 26/195 (13%)
Query: 81 KKLLTRQNTTLYNEPKTNVSHIVFGIGGSANTWDDRRHYCELWWKPGLTRGFVWLDEKPN 140
+ L R T P T + I + + N D R L K W +
Sbjct: 129 RDLSQRAVTATPQPPVTELDDIFISVKTTKNYHDTR---LALIIK-------TWFQLARD 178
Query: 141 KTWPATSPPYKVSQDTSRFQYTSWYGTRSAIRIARIIKETFRLGL---GDVRWFVLGDDD 197
+TW T Q+ ++ + ++ R A K + L + +WF DDD
Sbjct: 179 QTWFFTDTDDHYYQEKTKGHLINTKCSQGHFRKALCCKMSAELDVFLESGKKWFCHFDDD 238
Query: 198 TVFFLENLVTVLGRYDHNQMYYIGGNSESVEQDVIH------------SYTMAYGGGGFA 245
+ LV +L Y + +Y+G S S + IH ++ A GG GF
Sbjct: 239 NYVNVPRLVKLLDEYSPSVDWYLGKPSISSPLE-IHLDSKNTTTNKKITFWFATGGAGFC 297
Query: 246 ISYPLAAELVRVLDG 260
+S L +++ + G
Sbjct: 298 LSRALTLKMLPIAGG 312
Database: swissprot
Posted date: Mar 23, 2013 2:32 AM
Number of letters in database: 191,569,459
Number of sequences in database: 539,616
Lambda K H
0.321 0.136 0.430
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 184,303,143
Number of Sequences: 539616
Number of extensions: 7830938
Number of successful extensions: 16314
Number of sequences better than 100.0: 29
Number of HSP's better than 100.0 without gapping: 8
Number of HSP's successfully gapped in prelim test: 21
Number of HSP's that attempted gapping in prelim test: 16288
Number of HSP's gapped (non-prelim): 33
length of query: 478
length of database: 191,569,459
effective HSP length: 121
effective length of query: 357
effective length of database: 126,275,923
effective search space: 45080504511
effective search space used: 45080504511
T: 11
A: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.8 bits)
S2: 63 (28.9 bits)