Citrus Sinensis ID: 044016

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Local Sequence Feature Prediction

Residue Number Marker
--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120-------130-------140-------150-------160-------170-------180-------190-------200-------210-------220-------230-------240-------250-------260-------270-------280-------290-------300-------310-------320-------330-------340--
Protein Sequence
MSSSTSKTLDKPFQGYDEQGQTQMGFALIQRNPNSTSPSSEKRGRRKQPEPGRFLGVRRRPWGRYAAEIRDPTTKERHWLGTFDTAHEAALAYDRAALSMKGAQARTNFIYTDNGTFHSLLTPFDIQALLPPPPQSSQFTVQNSTSAPPQQLQPDISENNTTSKITITSNNETSTNETSYGSSLDDTGFFFSEPDNSNSGYLGCIVPDSCLNPPSNHQANSNSGASNDQKSFCSIMDTTSTVLPTEPYMAGDFSYFGEFNDGFWDDRQQSWEMNELSAMINNPIMAEDGCSMGALSDPAVIDHHYHNPSHGIVPQATSSSSASSSSTPLFGGNVVDFGYSLF
Secondary Structure (PSIPRED)
ccccccccccccccccccccccccccccccccccccccccccccccccccccccccEEEcccccEEEEcccccccccEEEcccccHHHHHHHHHHHHHHccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccHHHHHHHcccHHHcccccccccccccccccccccccccccccccccccccccccccccccccccccccc
Secondary Structure Prediction (SSPRO)
cccccccccccccccccccccccccccccccccccccccccHcccccccccccEEEEEEcccccEEEEEEccccccEEEEcccccHHHHHHHHHHHHHHHHcccEEEccccccccccccccccHHHHHHcccHccccccccccccccccHccccccccccccccccccccccccccHcccccccccHHHHccccccccccccccccccccccccccccccccccccccccHcccccccccccccccccccccHHHccHHHHHccccccccccHHHHHHHHcccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccc
Coil and Loop (DISEMBL)
mssstsktldkpfqgydeqgqTQMGFALiqrnpnstspssekrgrrkqpepgrflgvrrrpwgryaaeirdpttkerhwlgtfDTAHEAALAYDRAALSMKGAQARTnfiytdngtfhslltpfdiqallppppqssqftvqnstsappqqlqpdisennttskititsnnetstnetsygsslddtgfffsepdnsnsgylgcivpdsclnppsnhqansnsgasndqksfcsimdttstvlptepymagdfsyfgefndgfwddrqQSWEMNELSAminnpimaedgcsmgalsdpavidhhyhnpshgivpqatssssasssstplfggnvvdfgyslf
Flexible Loop (DISEMBL)
mssstsktldkpfqgyDEQGQTQMGFALIQRnpnstspssekrgrrkqpepgrflgvrrrpwgryaaeirdpttkerhWLGTFDTAHEAALAYDRAALSMKGAQARTNFIYTDNGTFHSLLTPFDIQALLPPPPQSSQFTVQNSTSappqqlqpdisennttskititsnnetstnetSYGSSLDDTGFFFSEPDNSNSGYLGCIVPDSCLNPPSNHQANSNSGASNDQKSFCSIMDTTSTVLPTEPYMAGDFSYFGEFNDGFWDDRQQSWEMNELSAMINNPIMAEDGCSMGALSDPAVIDHHYHNPSHGIVPQATSSSSAsssstplfggnvvDFGYSLF
Low Complexity Region (SEG)
MSSSTSKTLDKPFQGYDEQGQTQMGFALIQRNPNSTSPSSEKRGRRKQPEPGRFLGVRRRPWGRYAAEIRDPTTKERHWLGTFDTAHEAALAYDRAALSMKGAQARTNFIYTDNGTFHSLLTPFDIQAllppppqssqFTVQNSTSAPPQQLQPDisennttskititsnnetstnetsYGSSLDDTGFFFSEPDNSNSGYLGCIVPDSCLNPPSNHQANSNSGASNDQKSFCSIMDTTSTVLPTEPYMAGDFSYFGEFNDGFWDDRQQSWEMNELSAMINNPIMAEDGCSMGALSDPAVIDHHYHNPSHGIVPQatssssasssstPLFGGNVVDFGYSLF
Disordered region (IsUnstruct)
*****************************************************FLGVRRRPWGRYAAEIRDPTTKERHWLGTFDTAHEAALAYDRAALSMKGAQARTNFIYTDNGTFHSLLTPFDIQ**************************************************************F*********GYLGCIVPDS**********************FCSIMDTTSTVLPTEPYMAGDFSYFGEFNDGFWDDRQQSWEMNELSAMINNPIMAEDGCSMGALSDPAVIDHHY**************************GNVVDFG****
Disordered Region (DISOPRED)
*********************************************************RRRPWGRYAAEIRDPTTKERHWLGTFDTAHEAALAYDRAALSMKGAQARTNFIYT************************************************************************************SNSGYLGCIV*****************************************YMAGDFSYFGEFNDGFWDDRQQSWEMNELSAMINNPIMAEDGCSMGALSDPAVIDHHYHNPS******************PLFGGNVVDFGYSLF
Disordered Region (DISEMBL)
**********KPFQGYDEQGQTQMGFALIQR******************EPGRFLGVRRRPWGRYAAEIRDPTTKERHWLGTFDTAHEAALAYDRAALSMKGAQARTNFIYTDNGTFHSLLTPFDIQALLPPPP******************QPDISENNTTSKITITSN************SLDDTGFFFSEPDNSNSGYLGCIVPDSCLNPP**************QKSFCSIMDTTSTVLPTEPYMAGDFSYFGEFNDGFWDDRQQSWEMNELSAMINNPIMAEDGCSMGALSDPAVIDHHYHNPSHGIV**************PLFGGNVVDFGYSLF
Disordered Region (DISPRO)
**************************************************PGRFLGVRRRPWGRYAAEIRDPTTKERHWLGTFDTAHEAALAYDRAALSMKGAQARTNFIYT********************************************************************GSSLDDTGFFFSEPDNSNSGYLGCIVPDSCLNPPSNHQANSNSGASNDQKSFCSIMDTTSTVLPTEPYMAGDFSYFGEFNDGFWDDRQQSWEMNELSAMINNPIMAEDGCSMGALSDPAVIDHHYHNPSHGIVP**********SSTPLFGGNVVDFGYSLF
Transmembrane Helix (TMHMM)
oooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
Transmembrane Helix (HMMTOP)
oooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
Transmembrane Helix (MEMSAT)
iiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiihhhhhhhhhhhhhhhhhhhhoooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
TM Helix, Signal Peptide (MEMSAT_SVM)
iiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiihhhhhhhhhhhhhhhhoooo
TM Helix, Signal Peptide (Phobius)
oooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
Signal Peptide (SignalP HMM Mode)
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Signal Peptide (SignalP NN Mode)
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Coiled Coils (COILS)
MSSSTSKTLDKPFQGYDEQGQTQMGFALIQRNPNSTSPSSEKRGRRKQPEPGRFLGVRRRPWGRYAAEIRDPTTKERHWLGTFDTAHEAALAYDRAALSMKGAQARTNFIYTDNGTFHSLLTPFDIQALLPPPPQSSQFTVQNSTSAPPQQLQPDISENNTTSKITITSNNETSTNETSYGSSLDDTGFFFSEPDNSNSGYLGCIVPDSCLNPPSNHQANSNSGASNDQKSFCSIMDTTSTVLPTEPYMAGDFSYFGEFNDGFWDDRQQSWEMNELSAMINNPIMAEDGCSMGALSDPAVIDHHYHNPSHGIVPQATSSSSASSSSTPLFGGNVVDFGYSLF
Positional Conservation
no confident homologs detected

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Close Homologs for Annotation Transfer

Close Homologs in SWISS-PROT Database Detected by BLAST

Original result of BLAST against SWISS-PROT Database

ID	Length	Definition	RBH(Q2H)	RBH(H2Q)	Q cover	H cover	Identity	E-value
Query	342	2.2.26 [Sep-21-2011]
Q6J9Q2	348	Ethylene-responsive trans	yes	no	0.780	0.767	0.425	8e-51
Q9M644	211	Ethylene-responsive trans	no	no	0.219	0.355	0.75	4e-28
Q9FZ90	245	Ethylene-responsive trans	no	no	0.251	0.351	0.602	1e-24
Q3E703	219	Ethylene-responsive trans	no	no	0.228	0.356	0.653	2e-24
Q9FYK5	306	Ethylene-responsive trans	no	no	0.172	0.192	0.762	9e-22
Q9SAD4	328	Ethylene-responsive trans	no	no	0.172	0.179	0.745	3e-21
Q9M374	315	Ethylene-responsive trans	no	no	0.225	0.244	0.477	1e-18
Q9ZWA2	245	Ethylene-responsive trans	no	no	0.233	0.326	0.530	4e-18
O80340	222	Ethylene-responsive trans	no	no	0.166	0.256	0.719	5e-18
Q9LYU3	212	Ethylene-responsive trans	no	no	0.181	0.292	0.645	1e-17

>sp|Q6J9Q2|ERF86_ARATH Ethylene-responsive transcription factor ERF086 OS=Arabidopsis thaliana GN=ERF086 PE=2 SV=2

 Score =  201 bits (510), Expect = 8e-51,   Method: Compositional matrix adjust.
 Identities = 143/336 (42%), Positives = 185/336 (55%), Gaps = 69/336 (20%)

Query: 4   STSKTLD--KPFQGYDEQGQTQMGFALIQRNPNSTSPSS----EKRGRR-KQPEPGRFLG 56
           STSKTLD  KPF    E  QTQMGFALI +N ++ + ++    E+RGRR KQ EPGRFLG
Sbjct: 2   STSKTLDHNKPF----ETSQTQMGFALIHQNTSANTTTTTTTGERRGRRSKQAEPGRFLG 57

Query: 57  VRRRPWGRYAAEIRDPTTKERHWLGTFDTAHEAALAYDRAALSMKGAQARTNFIYTDNGT 116
           VRRRPWGRYAAEIRDPTTKERHWLGTFDTAHEAALAYDRAALSM+G QARTNF+YT    
Sbjct: 58  VRRRPWGRYAAEIRDPTTKERHWLGTFDTAHEAALAYDRAALSMRGTQARTNFVYTPTDV 117

Query: 117 FHSLLTPFDIQALLPPP--------PQSS-QFTVQN----STSAPPQQLQPDISENNTTS 163
            H++LT  ++ +L+  P        P SS QF + +         PQQ +  + +    +
Sbjct: 118 -HTILTNPNLHSLIVSPYNNNQSFLPNSSPQFVIDHHPHYQNYHQPQQPKHTLPQTVLPA 176

Query: 164 KITITSNNETSTNETSYGSSL--------------DDTGFFFS------EPDNSNSGYLG 203
               T     S +  ++G+S               ++  FFFS         N+NSGYL 
Sbjct: 177 ASFKTPVRHQSVDIQAFGNSPQNSSSNGSLSSSLDEENNFFFSLTSEEHNKSNNNSGYLD 236

Query: 204 CIVPDSCLNPPSNHQANSNSGASNDQKSFCSIMDTTSTVLPTEPYMAGDFSYFGEFNDGF 263
           CIVP+ CL PP       N   +    SF + + + +    +EPY        G F++ +
Sbjct: 237 CIVPNHCLKPPPEATTTQNQAGA----SFTTPVASKA----SEPY--------GGFSNSY 280

Query: 264 WDDRQQSWEMN-------ELSAMINNPIMAEDGCSM 292
           ++D +    MN       +LSAMI N   A    SM
Sbjct: 281 FEDGEMMM-MNHHEFGSCDLSAMITNYGAAAASMSM 315

Probably acts as a transcriptional activator. Binds to the GCC-box pathogenesis-related promoter element. May be involved in the regulation of gene expression by stress factors and by components of stress signal transduction pathways.
Arabidopsis thaliana (taxid: 3702)

>sp|Q9M644|LEP_ARATH Ethylene-responsive transcription factor LEP OS=Arabidopsis thaliana GN=LEP PE=2 SV=1

 Score =  125 bits (315), Expect = 4e-28,   Method: Compositional matrix adjust.
 Identities = 57/76 (75%), Positives = 66/76 (86%), Gaps = 1/76 (1%)

Query: 39  SSEKRGRRKQPEPG-RFLGVRRRPWGRYAAEIRDPTTKERHWLGTFDTAHEAALAYDRAA 97
           +S K  +++  + G RFLGVRRRPWGRYAAEIRDPTTKERHWLGTFDTA EAALAYDRAA
Sbjct: 4   TSSKSKKKQDDQVGTRFLGVRRRPWGRYAAEIRDPTTKERHWLGTFDTAEEAALAYDRAA 63

Query: 98  LSMKGAQARTNFIYTD 113
            SM+G +ARTNF+Y+D
Sbjct: 64  RSMRGTRARTNFVYSD 79

Cell division-promoting factor involved in leaf blade differentiation, inflorescence branching, as well as in carpel and silique shape. Promotes the number of xylem cells. Regulates positively the gibberellin signaling pathway leading to germination, hypocotyl elongation, and leaf expansion. Probably acts as a transcriptional activator. Binds to the GCC-box pathogenesis-related promoter element. May be involved in the regulation of gene expression by stress factors and by components of stress signal transduction pathways.

Arabidopsis thaliana (taxid: 3702)

>sp|Q9FZ90|ERF87_ARATH Ethylene-responsive transcription factor ERF087 OS=Arabidopsis thaliana GN=ERF087 PE=2 SV=1

 Score =  114 bits (285), Expect = 1e-24,   Method: Compositional matrix adjust.
 Identities = 56/93 (60%), Positives = 69/93 (74%), Gaps = 7/93 (7%)

Query: 50  EPGRFLGVRRRPWGRYAAEIRDPTTKERHWLGTFDTAHEAALAYDRAALSMKGAQARTNF 109
           E  +++GVRRRPWGRYAAEIR+PTTKER+WLGTFDTA EAALAYDRAA S++G  ARTNF
Sbjct: 35  EEIKYVGVRRRPWGRYAAEIRNPTTKERYWLGTFDTAEEAALAYDRAARSIRGLTARTNF 94

Query: 110 IYTD---NGTFHSLLTPFD----IQALLPPPPQ 135
           +Y+D     +  S ++P +    I  L  PP Q
Sbjct: 95  VYSDMPRGSSVTSFVSPDESQRFISELFNPPSQ 127

Probably acts as a transcriptional activator. Binds to the GCC-box pathogenesis-related promoter element. May be involved in the regulation of gene expression by stress factors and by components of stress signal transduction pathways.

Arabidopsis thaliana (taxid: 3702)

>sp|Q3E703|ERF88_ARATH Ethylene-responsive transcription factor ERF088 OS=Arabidopsis thaliana GN=ERF088 PE=2 SV=1

 Score =  113 bits (283), Expect = 2e-24,   Method: Compositional matrix adjust.
 Identities = 51/78 (65%), Positives = 60/78 (76%)

Query: 37  SPSSEKRGRRKQPEPGRFLGVRRRPWGRYAAEIRDPTTKERHWLGTFDTAHEAALAYDRA 96
           S +  K    K+ + G++LGVRRRPWGRYAAEIR+P TKERHWLGTFDTA EAA AYD A
Sbjct: 4   SSNKRKSKEEKKLQEGKYLGVRRRPWGRYAAEIRNPFTKERHWLGTFDTAEEAAFAYDVA 63

Query: 97  ALSMKGAQARTNFIYTDN 114
           A S+ G+ A TNF YT+N
Sbjct: 64  ARSISGSLATTNFFYTEN 81

Probably acts as a transcriptional activator. Binds to the GCC-box pathogenesis-related promoter element. May be involved in the regulation of gene expression by stress factors and by components of stress signal transduction pathways.

Arabidopsis thaliana (taxid: 3702)

>sp|Q9FYK5|ESR2_ARATH Ethylene-responsive transcription factor ESR2 OS=Arabidopsis thaliana GN=ESR2 PE=1 SV=1

 Score =  104 bits (260), Expect = 9e-22,   Method: Compositional matrix adjust.
 Identities = 45/59 (76%), Positives = 51/59 (86%)

Query: 53  RFLGVRRRPWGRYAAEIRDPTTKERHWLGTFDTAHEAALAYDRAALSMKGAQARTNFIY 111
           R+ GVRRRPWGRYAAEIRDP +KER WLGTFDTA EAA AYD AA +M+G +ARTNF+Y
Sbjct: 57  RYRGVRRRPWGRYAAEIRDPLSKERRWLGTFDTAEEAACAYDCAARAMRGLKARTNFVY 115

Required for correct embryo patterning and cotyledon organogenesis. May regulates positively the gibberellin signaling pathway leading to germination, hypocotyl elongation, and leaf expansion. Involved in the cytokinin signaling pathway that promotes shoot regeneration, probably through transcriptional activation of target genes such as CUC1. Acts as a transcriptional activator. Binds to the GCC-box pathogenesis-related promoter element. May be involved in the regulation of gene expression by stress factors and by components of stress signal transduction pathways.

Arabidopsis thaliana (taxid: 3702)

>sp|Q9SAD4|ESR1_ARATH Ethylene-responsive transcription factor ESR1 OS=Arabidopsis thaliana GN=ESR1 PE=1 SV=1

 Score =  102 bits (255), Expect = 3e-21,   Method: Compositional matrix adjust.
 Identities = 44/59 (74%), Positives = 50/59 (84%)

Query: 53  RFLGVRRRPWGRYAAEIRDPTTKERHWLGTFDTAHEAALAYDRAALSMKGAQARTNFIY 111
           R+ GVRRRPWGRYAAEIRDP +KER WLGTFDTA +AA AYD AA + +GA+ARTNF Y
Sbjct: 56  RYRGVRRRPWGRYAAEIRDPMSKERRWLGTFDTAEQAACAYDSAARAFRGAKARTNFTY 114

Regulates gene expression patterns in meristems and thus modulates organ development. Required for correct embryon patterning and cotyledon organogenesis. Modulates auxin signaling pathway in early embryos. Involved in the cytokinin signaling pathway that promotes shoot regeneration. Acts as a transcriptional activator. Binds to the GCC-box pathogenesis-related promoter element. May be involved in the regulation of gene expression by stress factors and by components of stress signal transduction pathways.

Arabidopsis thaliana (taxid: 3702)

>sp|Q9M374|CRF6_ARATH Ethylene-responsive transcription factor CRF6 OS=Arabidopsis thaliana GN=CRF6 PE=1 SV=1

 Score = 94.4 bits (233), Expect = 1e-18,   Method: Compositional matrix adjust.
 Identities = 43/90 (47%), Positives = 63/90 (70%), Gaps = 13/90 (14%)

Query: 34  NSTSPSSEKRGRRKQPE-------------PGRFLGVRRRPWGRYAAEIRDPTTKERHWL 80
            S+S ++ ++G+ K+ E             P ++ GVR+RPWG++AAEIRDP+++ R WL
Sbjct: 72  ESSSSTAARKGKHKEEESVVVEDDVSTSVKPKKYRGVRQRPWGKFAAEIRDPSSRTRIWL 131

Query: 81  GTFDTAHEAALAYDRAALSMKGAQARTNFI 110
           GTF TA EAA+AYDRAA+ +KG +A TNF+
Sbjct: 132 GTFVTAEEAAIAYDRAAIHLKGPKALTNFL 161

Component of the cytokinin signaling pathway involved in cotyledons, leaves, and embryos development. Probably acts as a transcriptional activator. Binds to the GCC-box pathogenesis-related promoter element. May be involved in the regulation of gene expression by stress factors and by components of stress signal transduction pathways.

Arabidopsis thaliana (taxid: 3702)

>sp|Q9ZWA2|ERF77_ARATH Ethylene-responsive transcription factor 10 OS=Arabidopsis thaliana GN=ERF10 PE=2 SV=1

 Score = 92.8 bits (229), Expect = 4e-18,   Method: Compositional matrix adjust.
 Identities = 43/81 (53%), Positives = 55/81 (67%), Gaps = 1/81 (1%)

Query: 29  IQRNPNSTSPSSEKRGRRKQPEPGRFLGVRRRPWGRYAAEIRDPTTKERHWLGTFDTAHE 88
           +++  N T   +   G  K  E  R+ GVRRRPWGRYAAEIRDP  K+R WLG+F+T  E
Sbjct: 29  VKKRKNVTKALAVNDGGEKSKEV-RYRGVRRRPWGRYAAEIRDPVKKKRVWLGSFNTGEE 87

Query: 89  AALAYDRAALSMKGAQARTNF 109
           AA AYD AA+  +G++A TNF
Sbjct: 88  AARAYDSAAIRFRGSKATTNF 108

Involved in the regulation of gene expression by stress factors and by components of stress signal transduction pathways. Transcription factor that binds to the GCC-box pathogenesis-related promoter element. Acts as a transcriptional inhibitor and may regulate other AtERFs.

Arabidopsis thaliana (taxid: 3702)

>sp|O80340|ERF78_ARATH Ethylene-responsive transcription factor 4 OS=Arabidopsis thaliana GN=ERF4 PE=1 SV=1

 Score = 92.0 bits (227), Expect = 5e-18,   Method: Compositional matrix adjust.
 Identities = 41/57 (71%), Positives = 46/57 (80%)

Query: 53  RFLGVRRRPWGRYAAEIRDPTTKERHWLGTFDTAHEAALAYDRAALSMKGAQARTNF 109
           R+ GVR+RPWGRYAAEIRDP  K R WLGTFDTA EAA AYD AA   +GA+A+TNF
Sbjct: 24  RYRGVRKRPWGRYAAEIRDPGKKTRVWLGTFDTAEEAARAYDTAARDFRGAKAKTNF 80

Acts as a transcriptional repressor. Binds to the GCC-box pathogenesis-related promoter element. Involved in the regulation of gene expression by stress factors and by components of stress signal transduction pathways, and could also regulate other AtERFs.

Arabidopsis thaliana (taxid: 3702)

>sp|Q9LYU3|EF113_ARATH Ethylene-responsive transcription factor ERF113 OS=Arabidopsis thaliana GN=ERF113 PE=2 SV=1

 Score = 90.5 bits (223), Expect = 1e-17,   Method: Compositional matrix adjust.
 Identities = 40/62 (64%), Positives = 47/62 (75%)

Query: 48  QPEPGRFLGVRRRPWGRYAAEIRDPTTKERHWLGTFDTAHEAALAYDRAALSMKGAQART 107
           QP    + GVR+RPWG++AAEIRDP    R WLGTF+TA EAALAYDRAAL  KG +A+ 
Sbjct: 33  QPRRRHYRGVRQRPWGKWAAEIRDPKKAARVWLGTFETAEEAALAYDRAALKFKGTKAKL 92

Query: 108 NF 109
           NF
Sbjct: 93  NF 94

Probably acts as a transcriptional activator. Binds to the GCC-box pathogenesis-related promoter element. May be involved in the regulation of gene expression by stress factors and by components of stress signal transduction pathways.

Arabidopsis thaliana (taxid: 3702)

Close Homologs in the Non-Redundant Database Detected by BLAST

Original result of BLAST against Nonredundant Database

GI	Length	Definition	Q cover	H cover	Identity	E-value
Query	342
147853206	343	hypothetical protein VITISV_003244 [Viti	0.929	0.927	0.550	3e-88
225432346	343	PREDICTED: ethylene-responsive transcrip	0.929	0.927	0.550	3e-88
224123082	341	AP2/ERF domain-containing transcription	0.926	0.929	0.546	3e-83
255551691	356	DNA binding protein, putative [Ricinus c	0.923	0.887	0.523	7e-81
356519988	346	PREDICTED: ethylene-responsive transcrip	0.935	0.924	0.502	9e-70
356564583	354	PREDICTED: ethylene-responsive transcrip	0.926	0.895	0.477	1e-67
449524280	326	PREDICTED: ethylene-responsive transcrip	0.891	0.935	0.484	2e-67
449433379	326	PREDICTED: ethylene-responsive transcrip	0.888	0.932	0.477	5e-67
357478673	340	Ethylene-responsive transcription factor	0.929	0.935	0.472	8e-65
42567940	348	ethylene response factor PUCHI [Arabidop	0.780	0.767	0.425	5e-49

>gi|147853206|emb|CAN78552.1| hypothetical protein VITISV_003244 [Vitis vinifera]

 Score =  331 bits (849), Expect = 3e-88,   Method: Compositional matrix adjust.
 Identities = 200/363 (55%), Positives = 242/363 (66%), Gaps = 45/363 (12%)

Query: 4   STSKTLDKPFQGYDEQGQTQMGFALIQRNPNSTSPSSEKRGRRKQPEPGRFLGVRRRPWG 63
           S+SKTLDKP +G D     Q GF+LIQRN ++T P+ E+RGRRKQ EPGRFLGVRRRPWG
Sbjct: 2   SSSKTLDKPLRGLDPS-LVQAGFSLIQRNTSTTQPN-ERRGRRKQAEPGRFLGVRRRPWG 59

Query: 64  RYAAEIRDPTTKERHWLGTFDTAHEAALAYDRAALSMKGAQARTNFIYTDNGTFHSLLTP 123
           RYAAEIRDPTTKERHWLGTFDTA EAALAYDRAALSMKG QARTNFIY+DN TFHSLLTP
Sbjct: 60  RYAAEIRDPTTKERHWLGTFDTAQEAALAYDRAALSMKGTQARTNFIYSDNTTFHSLLTP 119

Query: 124 FDIQALLPPPPQSSQFTVQNSTSAPPQQ---LQPDISENNTTSKITITSNNETSTNETSY 180
           FD+Q LLPP    SQF   N T  P        P  S+++ T      SNN     +TSY
Sbjct: 120 FDVQTLLPP----SQFLTANHTKQPSNHNTSCHPHTSQSDQTP---TQSNNIEVCAQTSY 172

Query: 181 GSSL----DDTGFFFSEPDNSNSGYLGCIVPDSCLNPPSNHQA---NSNSGASNDQKSFC 233
            + L    + + FFFS   +SNSGYLGCIVPD+CLNPPS+      N+++  ++  ++FC
Sbjct: 173 ETPLSSNNNTSSFFFST--DSNSGYLGCIVPDNCLNPPSSATGLNHNNSNSNTSSDQNFC 230

Query: 234 S---------IMDTTSTVLPTEPYMA---GDFSYFGEFNDGFWDDRQQSWEMN--ELSAM 279
           S         +    S  LP +   A   GDF  F E + GFW + +QSWE+N  ELSAM
Sbjct: 231 SKSTSFPETELQCGGSNTLPIDAVNAASPGDFPSFDELSGGFWGN-EQSWELNSSELSAM 289

Query: 280 INNPIMAEDGCSMGALSDPAVIDHHYHNPSHGIVPQATSSSSASSSSTPLFGGNVVDFGY 339
           INNP+M EDGC MGAL    ++D    NP++G++ QA +S + S S  P   G+VVD GY
Sbjct: 290 INNPLMVEDGC-MGALY--PMMD----NPTYGVMSQAAASVTCSPSLPPF--GDVVDLGY 340

Query: 340 SLF 342
           SLF
Sbjct: 341 SLF 343

Source: Vitis vinifera

Species: Vitis vinifera

Genus: Vitis

Family: Vitaceae

Order: Vitales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|225432346|ref|XP_002276452.1| PREDICTED: ethylene-responsive transcription factor ERF086-like [Vitis vinifera]

 Score =  331 bits (849), Expect = 3e-88,   Method: Compositional matrix adjust.
 Identities = 200/363 (55%), Positives = 242/363 (66%), Gaps = 45/363 (12%)

Query: 4   STSKTLDKPFQGYDEQGQTQMGFALIQRNPNSTSPSSEKRGRRKQPEPGRFLGVRRRPWG 63
           S+SKTLDKP +G D     Q GF+LIQRN ++T P+ E+RGRRKQ EPGRFLGVRRRPWG
Sbjct: 2   SSSKTLDKPLRGLDPS-LVQAGFSLIQRNTSTTQPN-ERRGRRKQAEPGRFLGVRRRPWG 59

Query: 64  RYAAEIRDPTTKERHWLGTFDTAHEAALAYDRAALSMKGAQARTNFIYTDNGTFHSLLTP 123
           RYAAEIRDPTTKERHWLGTFDTA EAALAYDRAALSMKG QARTNFIY+DN TFHSLLTP
Sbjct: 60  RYAAEIRDPTTKERHWLGTFDTAQEAALAYDRAALSMKGTQARTNFIYSDNTTFHSLLTP 119

Query: 124 FDIQALLPPPPQSSQFTVQNSTSAPPQQ---LQPDISENNTTSKITITSNNETSTNETSY 180
           FD+Q LLPP    SQF   N T  P        P  S+++ T      SNN     +TSY
Sbjct: 120 FDVQTLLPP----SQFLTANHTKQPSNHNTSCHPHTSQSDQTP---TQSNNIEVCAQTSY 172

Query: 181 GSSL----DDTGFFFSEPDNSNSGYLGCIVPDSCLNPPSNHQA---NSNSGASNDQKSFC 233
            + L    + + FFFS   +SNSGYLGCIVPD+CLNPPS+      N+++  ++  ++FC
Sbjct: 173 ETPLSSNNNTSSFFFST--DSNSGYLGCIVPDNCLNPPSSATGLNHNNSNSNTSSDQNFC 230

Query: 234 S---------IMDTTSTVLPTEPYMA---GDFSYFGEFNDGFWDDRQQSWEMN--ELSAM 279
           S         +    S  LP +   A   GDF  F E + GFW + +QSWE+N  ELSAM
Sbjct: 231 SKSMSFPETELQCGGSNTLPIDAVNAASPGDFPSFDELSGGFWGN-EQSWELNSSELSAM 289

Query: 280 INNPIMAEDGCSMGALSDPAVIDHHYHNPSHGIVPQATSSSSASSSSTPLFGGNVVDFGY 339
           INNP+M EDGC MGAL    ++D    NP++G++ QA +S + S S  P   G+VVD GY
Sbjct: 290 INNPLMVEDGC-MGALY--PMMD----NPTYGVMSQAAASVTCSPSLPPF--GDVVDLGY 340

Query: 340 SLF 342
           SLF
Sbjct: 341 SLF 343

Source: Vitis vinifera

Species: Vitis vinifera

Genus: Vitis

Family: Vitaceae

Order: Vitales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|224123082|ref|XP_002330334.1| AP2/ERF domain-containing transcription factor [Populus trichocarpa] gi|222871538|gb|EEF08669.1| AP2/ERF domain-containing transcription factor [Populus trichocarpa]

 Score =  315 bits (806), Expect = 3e-83,   Method: Compositional matrix adjust.
 Identities = 198/362 (54%), Positives = 236/362 (65%), Gaps = 45/362 (12%)

Query: 4   STSKTLDKPFQGYDEQGQTQMGFALIQRNPNSTSPSS-EKRGRRKQPEPGRFLGVRRRPW 62
           STSKT DKP +GYD       GFAL+QRN  +T P + E+RGRRKQ EPGRFLGVRRRPW
Sbjct: 2   STSKTFDKPLEGYDTL-NIHAGFALLQRN--TTPPQTGERRGRRKQAEPGRFLGVRRRPW 58

Query: 63  GRYAAEIRDPTTKERHWLGTFDTAHEAALAYDRAALSMKGAQARTNFIYTDNGTFHSLLT 122
           GRYAAEIRDPTTKERHWLGTFDTAHEAALAYDRAALSMKG QARTNF Y+DN TFHSLLT
Sbjct: 59  GRYAAEIRDPTTKERHWLGTFDTAHEAALAYDRAALSMKGTQARTNFNYSDNTTFHSLLT 118

Query: 123 PFDIQALLPPPPQSSQFTVQNSTSAPPQQLQPDISENNTTSKITITSNNETSTNETSYGS 182
           PFDIQA LP     SQF        P  Q  P   E  T   +T   ++  +  E+S GS
Sbjct: 119 PFDIQAFLP----QSQFLTNTQIKQPTNQSSPVKLE--TCQNMTPNQSSSDTYAESSDGS 172

Query: 183 SLDDTGFFFSEPDNSNSGYLGCIVPDSCLN--PPSNHQANSNSGASNDQKSFCSIMDTTS 240
           + +   FFFS  D SNSGYLGCIVPD+CL   P S     + S ASNDQ S CS+  +TS
Sbjct: 173 AHETNSFFFSNED-SNSGYLGCIVPDNCLRPPPSSTSSKTTKSNASNDQYS-CSMTASTS 230

Query: 241 ----------------TVLPTEPYMAGDFSYFGEFNDGFWDDRQQSWEMN--ELSAMINN 282
                           T +PT+ Y  G+F  F E N GFW D Q SW+ N  +LSAM+NN
Sbjct: 231 LEDHSQCNKYAPPLEITNVPTKAYTPGNFPGFDELNHGFWGD-QLSWDGNSGDLSAMMNN 289

Query: 283 PIMAEDGC--SMGALSDPAVIDHHYHNPSHGIVPQATSSSSASSSSTPLFGGNVVDFGYS 340
           P+M E+ C  ++ ++ +P         P++G++PQATSS S+SS S P + G+ V+FGYS
Sbjct: 290 PLMVENVCMDTLYSVDNP---------PTYGLMPQATSSVSSSSLSYPAY-GDAVNFGYS 339

Query: 341 LF 342
           LF
Sbjct: 340 LF 341

Source: Populus trichocarpa

Species: Populus trichocarpa

Genus: Populus

Family: Salicaceae

Order: Malpighiales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|255551691|ref|XP_002516891.1| DNA binding protein, putative [Ricinus communis] gi|223543979|gb|EEF45505.1| DNA binding protein, putative [Ricinus communis]

 Score =  306 bits (785), Expect = 7e-81,   Method: Compositional matrix adjust.
 Identities = 198/378 (52%), Positives = 239/378 (63%), Gaps = 62/378 (16%)

Query: 4   STSKTLDKP-FQGYDEQGQTQMGFALIQRNPNSTSPSS--EKRGRRKQPEPGRFLGVRRR 60
           STSKTLDKP F+  +  G    G ALIQRN   TSPS   E+RGRRKQPEPGRFLGVRRR
Sbjct: 2   STSKTLDKPLFEPVNIHG----GIALIQRN---TSPSQNGERRGRRKQPEPGRFLGVRRR 54

Query: 61  PWGRYAAEIRDPTTKERHWLGTFDTAHEAALAYDRAALSMKGAQARTNFIYTDNGTFHSL 120
           PWGRYAAEIRDPTTKERHWLGTFDTA EAALAYDRAALSMKG QARTNFIYTDNG+FHSL
Sbjct: 55  PWGRYAAEIRDPTTKERHWLGTFDTAQEAALAYDRAALSMKGTQARTNFIYTDNGSFHSL 114

Query: 121 LTPFDIQALLPPPPQSSQFTVQN-------------STSAPPQQLQPDISENNTTSKITI 167
           LTPFD+QA  PPP    QF   N                +P   L+            + 
Sbjct: 115 LTPFDVQAFFPPP----QFLTSNVQGNKQQQQQPINQNISPVNNLETRHQNETLNQSSSD 170

Query: 168 TSNNETSTNETSYGSSLDDTGFFFSEPDNSNSGYLGCIVPDSCLNPPSNHQANSNSGASN 227
            S  ETST++++Y    D   FFFS+ D SNSGYLGCIVPD+CL PPS+  + +NS  SN
Sbjct: 171 RSGAETSTDQSAY----DHNSFFFSKDDYSNSGYLGCIVPDNCLKPPSDPPSYTNS-TSN 225

Query: 228 DQKS-----FCSIMDTT----------STVLPTEPY-MAGDFSYFGEFNDG-FWDDRQQS 270
           + KS     F SI D +          +T   T+P     +F  F + ++G  W D+QQ 
Sbjct: 226 ESKSPKDQNFISIADQSHLNNYAFPQDTTSASTKPLNYPANFPCFDDISNGIIWGDQQQP 285

Query: 271 WEM--NELSAMIN-NPIMAEDGCSMGALSDPAVIDHHYHNPSHGIVPQATSSSSASSSST 327
           WE+  ++LSA+IN NP+M  D C M AL  P++      NPS+G V QA +++S+S S +
Sbjct: 286 WELSSDDLSAIINYNPLMVGDVC-MEALH-PSI-----SNPSYGSVSQAAATTSSSVSCS 338

Query: 328 ---PLFGGNVVDFGYSLF 342
              P +G + VDFGYSLF
Sbjct: 339 PSYPYYGDSAVDFGYSLF 356

Source: Ricinus communis

Species: Ricinus communis

Genus: Ricinus

Family: Euphorbiaceae

Order: Malpighiales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|356519988|ref|XP_003528650.1| PREDICTED: ethylene-responsive transcription factor ERF086-like [Glycine max]

 Score =  270 bits (689), Expect = 9e-70,   Method: Compositional matrix adjust.
 Identities = 183/364 (50%), Positives = 222/364 (60%), Gaps = 44/364 (12%)

Query: 4   STSKTL-DKPFQGYDEQGQTQMGFALIQRNPNSTSPSSEKRGRRKQPEPGRFLGVRRRPW 62
           STS+T  D PF+GYD   QTQM  +L+QRN   TSP  E+RGRRKQ EPGRFLGVRRRPW
Sbjct: 2   STSRTSSDTPFKGYDP-SQTQMCLSLLQRN---TSPCGERRGRRKQAEPGRFLGVRRRPW 57

Query: 63  GRYAAEIRDPTTKERHWLGTFDTAHEAALAYDRAALSMKGAQARTNFIYTDNGTFHSL-L 121
           GRYAAEIRDPTTKERHWLGTFDTA EAALAYDRAALSMKG+QARTNF+Y+DN  FH+L L
Sbjct: 58  GRYAAEIRDPTTKERHWLGTFDTAQEAALAYDRAALSMKGSQARTNFVYSDNINFHTLQL 117

Query: 122 TPFDIQALLPPPPQSSQFTVQNSTSAPPQQLQPDISENNTTSKITITSNNETSTNETSYG 181
           +P ++Q + P  P S   T   + +      Q   S  N  +   +  NN+    ET+YG
Sbjct: 118 SPMNVQ-VQPLLPASQFLTTTTTQTNQNSHFQVIHSTPNCGNPSPL--NNDMCV-ETTYG 173

Query: 182 SSLDDTGFFFSEPDNSNSGYLGCIVPDSCLNPP--------------SNHQANSNSGAS- 226
           S+ DD  FFFS   +SNSGYL CIVPD C  P               S+ +AN++S  S 
Sbjct: 174 SAQDD-NFFFSS--DSNSGYLECIVPDDCFRPASSSSNSSNSRKSNVSDQKANTSSMEST 230

Query: 227 NDQKSFCSIMDTTS------TVLPTEPYMAGDFSYFGEFNDGFWDDRQQSWEMN--ELSA 278
           N      S +D TS       + P   Y   DF Y  E + G WDD QQSW+ N  ELSA
Sbjct: 231 NHHHHQYSHVDMTSFSQEGIEMAPRASYNFSDFCYQSEVSQGSWDD-QQSWDWNSSELSA 289

Query: 279 MINNPIMAEDGCSMGALSDPAVIDHHYHNPSHGIVPQATSSSSASSSSTPLFGGNVVDFG 338
           +  NP+  E+GC M AL    + D    + S+G++ +A SSS+  S S P FG   VD G
Sbjct: 290 IFKNPMRVENGC-MDALC--PINDS--PSSSYGLMNEAASSSTTCSPSLPPFGD--VDLG 342

Query: 339 YSLF 342
           Y LF
Sbjct: 343 YPLF 346

Source: Glycine max

Species: Glycine max

Genus: Glycine

Family: Fabaceae

Order: Fabales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|356564583|ref|XP_003550531.1| PREDICTED: ethylene-responsive transcription factor ERF086-like [Glycine max]

 Score =  263 bits (671), Expect = 1e-67,   Method: Compositional matrix adjust.
 Identities = 179/375 (47%), Positives = 223/375 (59%), Gaps = 58/375 (15%)

Query: 4   STSKTL-DKPFQGYDEQGQTQMGFALIQRNPNSTSPSSEKRGRRKQPEPGRFLGVRRRPW 62
           STS+T  D  F+GYD   QTQM  +L+QRN   TSP  E+RGRRKQ EPGRFLGVRRRPW
Sbjct: 2   STSRTSSDTAFKGYDP-SQTQMCLSLLQRN---TSPCGERRGRRKQAEPGRFLGVRRRPW 57

Query: 63  GRYAAEIRDPTTKERHWLGTFDTAHEAALAYDRAALSMKGAQARTNFIYTDNGTFHSL-L 121
           GRYAAEIRDPTTKERHWLGTFDTA EAALAYDRAALSMKG+QARTNF+Y+DN  FH+L L
Sbjct: 58  GRYAAEIRDPTTKERHWLGTFDTAQEAALAYDRAALSMKGSQARTNFVYSDNINFHTLQL 117

Query: 122 TPFDIQA--LLPPPPQSSQFTVQNSTSAPPQQLQPDISENNTTSKITITSN-------NE 172
           +P ++Q   LLP     +  T   +T+    Q +   ++N+ +  I   SN       N 
Sbjct: 118 SPMNVQVQPLLP-----ASQTFFTNTTTTTTQTKTPTNQNSLSQIIHSASNCGNPSPLNN 172

Query: 173 TSTNETSYGSSLDDTGFFFSEPDNSNSGYLGCIVPDSCLNPP--SNHQANSNSGASNDQK 230
               ET+YGS+ DD  FFFS   +SNSGYL CIVPD+C  P   S++ +NS     NDQK
Sbjct: 173 DMCVETTYGSAQDD-NFFFSS--DSNSGYLECIVPDNCFRPASSSSNSSNSRKSNVNDQK 229

Query: 231 SFCSIMDTTST-----------------------VLPTEPYMAGDFSYFGEFNDGFWDDR 267
           +  S M++T+                        + P   Y   DF Y  E + G WD  
Sbjct: 230 TNTSSMESTNHHHHHQFSHVDHMTSFSQEEGINEMAPRASYNLSDFCYQSEVSQGSWD-- 287

Query: 268 QQSWEMNELSAMINNPIMAEDGCSMGALSDPAVIDHHYHNPSHGIVPQATSSSSASSSST 327
              W  +ELSA+  NP+  E+GC   AL     I+    +PS+G++ +A SSS+  S S 
Sbjct: 288 ---WNCSELSAIFKNPMRVENGCMDDAL---YPINDSPTSPSYGLMNEAGSSSTTCSPSL 341

Query: 328 PLFGGNVVDFGYSLF 342
           P FG   VD GY LF
Sbjct: 342 PPFGD--VDLGYPLF 354

Source: Glycine max

Species: Glycine max

Genus: Glycine

Family: Fabaceae

Order: Fabales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|449524280|ref|XP_004169151.1| PREDICTED: ethylene-responsive transcription factor ERF086-like [Cucumis sativus]

 Score =  262 bits (669), Expect = 2e-67,   Method: Compositional matrix adjust.
 Identities = 174/359 (48%), Positives = 215/359 (59%), Gaps = 54/359 (15%)

Query: 4   STSKTLDKPFQGYDEQGQTQMGFALIQRNPNSTSPSS-EKRGRRKQPEPGRFLGVRRRPW 62
           +TSK  DK +  Y E GQ+QMGFAL+QRNP+  S +  E+RGRRKQ EPGRFLGVRRRPW
Sbjct: 2   ATSKASDKGYPIY-ETGQSQMGFALLQRNPSPISQNGGERRGRRKQAEPGRFLGVRRRPW 60

Query: 63  GRYAAEIRDPTTKERHWLGTFDTAHEAALAYDRAALSMKGAQARTNFIYTDNGTFHSLLT 122
           GRYAAEIRDPTTKERHWLGTFDTAHEAALAYDRAALSMKG QARTNFIY+D  TFHSLLT
Sbjct: 61  GRYAAEIRDPTTKERHWLGTFDTAHEAALAYDRAALSMKGTQARTNFIYSDTSTFHSLLT 120

Query: 123 PFDIQALLPPPPQSSQFTVQNSTSAPPQQLQPDISENNTTSKITITSNNETSTNETSYGS 182
            FD+Q  L P    S   +Q  T +P       ++  N  +   I+     + N     S
Sbjct: 121 AFDVQTNLLPNSDHSHSKLQQITPSP-------VTTPNNQNNNNISFAQSQALNP----S 169

Query: 183 SLD--DTGFFFSEPDNSNSGYLGCIVPDSCLNPPSNHQANS------NSGASNDQKSFCS 234
            +D  D+ FFFS  ++SNSGYL CIVPD+CL PPS+    +      +S ASND K F  
Sbjct: 170 VIDDHDSNFFFS--NDSNSGYLSCIVPDNCLKPPSDSNYKTQPKNIHSSTASNDLKKFSF 227

Query: 235 IMDTTSTVLPTEPYMAGDFSYFGEFNDGF---WDDRQQSWEMN--ELSAMIN-----NPI 284
               +   LP E    G   Y    N G+    +++Q+ W+ N  ELSA+IN     + +
Sbjct: 228 FASNSIETLPFE----GLDVYSNNNNGGYGSVMEEQQEIWDSNGDELSAIINSSSSSSSM 283

Query: 285 MAEDGCSMGALSDPAVIDHHYHNPSH-GIVPQATSSSSASSSSTPLFGGNVVDFGYSLF 342
           + E+G             H + N S+ G++PQ    SS  S S P F G   DFGY+L 
Sbjct: 284 VGENGGF-----------HPFMNTSYGGLLPQ----SSTCSPSAPSF-GEAFDFGYTLL 326

Source: Cucumis sativus

Species: Cucumis sativus

Genus: Cucumis

Family: Cucurbitaceae

Order: Cucurbitales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|449433379|ref|XP_004134475.1| PREDICTED: ethylene-responsive transcription factor ERF086-like [Cucumis sativus]

 Score =  261 bits (666), Expect = 5e-67,   Method: Compositional matrix adjust.
 Identities = 172/360 (47%), Positives = 214/360 (59%), Gaps = 56/360 (15%)

Query: 4   STSKTLDKPFQGYDEQGQTQMGFALIQRNPNSTSPSS-EKRGRRKQPEPGRFLGVRRRPW 62
           +TSK  DK +  Y E GQ+QMGFAL+QRNP+  S +  E+RGRRKQ EPGRFLGVRRRPW
Sbjct: 2   ATSKASDKGYPIY-ETGQSQMGFALLQRNPSPISQNGGERRGRRKQAEPGRFLGVRRRPW 60

Query: 63  GRYAAEIRDPTTKERHWLGTFDTAHEAALAYDRAALSMKGAQARTNFIYTDNGTFHSLLT 122
           GRYAAEIRDPTTKERHWLGTFDTAHEAALAYDRAALSMKG QARTNFIY+D  TFHSLLT
Sbjct: 61  GRYAAEIRDPTTKERHWLGTFDTAHEAALAYDRAALSMKGTQARTNFIYSDTSTFHSLLT 120

Query: 123 PFDIQALLPPPPQSSQFTVQNSTSAPPQQLQPDISENNTTSKITITSNNETSTNETSYGS 182
            FD+Q  L P    S   +Q  T +P       ++  N  +   I+     + N     S
Sbjct: 121 AFDVQTNLLPNSDHSHSKLQQITPSP-------VTTPNNQNNNNISFAQSQALNP----S 169

Query: 183 SLD--DTGFFFSEPDNSNSGYLGCIVPDSCLNPPSNHQANS------NSGASNDQKSFCS 234
            +D  D+ FFFS  ++SNSGYL CIVPD+CL PPS+    +      +S ASND K F  
Sbjct: 170 VIDDHDSNFFFS--NDSNSGYLSCIVPDNCLKPPSDSNYKTQPKNIHSSTASNDLKKFSF 227

Query: 235 IMDTTSTVLPTEPYMAGDFSYFGEFNDGFW----DDRQQSWEMN--ELSAMIN-----NP 283
               +   LP E         +   N G +    +++Q+ W+ N  ELSA+IN     + 
Sbjct: 228 FASNSIETLPFE-----GLDVYSNNNSGGYGSVMEEQQEIWDSNGDELSAIINSSSSSSS 282

Query: 284 IMAEDGCSMGALSDPAVIDHHYHNPSH-GIVPQATSSSSASSSSTPLFGGNVVDFGYSLF 342
           ++ E+G             H + N S+ G++PQ    SS  S S P F G   DFGY+L 
Sbjct: 283 MVGENGGF-----------HPFMNTSYGGLLPQ----SSTCSPSAPSF-GEAFDFGYTLL 326

Source: Cucumis sativus

Species: Cucumis sativus

Genus: Cucumis

Family: Cucurbitaceae

Order: Cucurbitales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|357478673|ref|XP_003609622.1| Ethylene-responsive transcription factor [Medicago truncatula] gi|355510677|gb|AES91819.1| Ethylene-responsive transcription factor [Medicago truncatula]

 Score =  253 bits (647), Expect = 8e-65,   Method: Compositional matrix adjust.
 Identities = 172/364 (47%), Positives = 212/364 (58%), Gaps = 46/364 (12%)

Query: 1   MSSSTSKTLDKPFQGYDEQGQTQMGFALIQRNPNSTSPSSEKRGRRKQPEPGRFLGVRRR 60
           MS+S   T D  F+GY E  QTQM  +L+QRN N TSPS EKRGRRKQ EPGRFLGVRRR
Sbjct: 1   MSTSKKITSDSSFKGYHETNQTQMCLSLLQRNTN-TSPSGEKRGRRKQSEPGRFLGVRRR 59

Query: 61  PWGRYAAEIRDPTTKERHWLGTFDTAHEAALAYDRAALSMKGAQARTNFIYTDNGTFHSL 120
           PWGRYAAEIRDPTTKERHWLGTFDTA EAALAYDRAA+SMKG QARTNFIY+D   FH+L
Sbjct: 60  PWGRYAAEIRDPTTKERHWLGTFDTAQEAALAYDRAAISMKGNQARTNFIYSDTINFHTL 119

Query: 121 L-TPFDIQALLPPPPQSSQFTVQNST------SAPPQQLQPDISENNTTSKITITSNNET 173
           + +P D+Q LLP     +      +T      +A   +   ++S  N    ++   + +T
Sbjct: 120 VSSPMDLQTLLPASQLLTNTQTNQNTTLSHLNTAHTSKNDQNLSSFNNDMIMSTFDHEKT 179

Query: 174 STNETSYGSSLDDTGFFFSEPDNSNSGYLGCIVPDSCLNPPSNHQANSNSGASNDQKSFC 233
               TSY S+ DD  FFFS  D +NSGYL CIVPD+C  P SN +  SN  AS+D+K   
Sbjct: 180 ----TSYASTHDD-NFFFSN-DTNNSGYLECIVPDNCFRPASNTRK-SNVSASSDEKVDN 232

Query: 234 SIMDTTSTVLPTEPYMAGDFSY----FGEF--------NDGFWDDRQQSWEMNELSAMIN 281
           +      ++     +    FS     F EF        + GF D     W  NELSA+ N
Sbjct: 233 NAERNKISMEGQSHFGMTSFSQEMPNFSEFSYSPSEICSQGFLD-----WNSNELSAIFN 287

Query: 282 N-PIMAEDGCSMGALSDPA--VIDHHYHNPSHGIVPQATSSSSASSSSTPLFGGNVVDFG 338
           N P+  ED C M  L  P   +I++   N    +  QA SSS+ S S         ++FG
Sbjct: 288 NKPLRVEDEC-MDTLMYPNYPIIENLSTNYVM-MNDQAASSSNYSPS---------LEFG 336

Query: 339 YSLF 342
           Y LF
Sbjct: 337 YPLF 340

Source: Medicago truncatula

Species: Medicago truncatula

Genus: Medicago

Family: Fabaceae

Order: Fabales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|42567940|ref|NP_197357.2| ethylene response factor PUCHI [Arabidopsis thaliana] gi|334302788|sp|Q6J9Q2.2|ERF86_ARATH RecName: Full=Ethylene-responsive transcription factor ERF086 gi|332005196|gb|AED92579.1| ethylene response factor PUCHI [Arabidopsis thaliana]

 Score =  201 bits (510), Expect = 5e-49,   Method: Compositional matrix adjust.
 Identities = 143/336 (42%), Positives = 185/336 (55%), Gaps = 69/336 (20%)

Query: 4   STSKTLD--KPFQGYDEQGQTQMGFALIQRNPNSTSPSS----EKRGRR-KQPEPGRFLG 56
           STSKTLD  KPF    E  QTQMGFALI +N ++ + ++    E+RGRR KQ EPGRFLG
Sbjct: 2   STSKTLDHNKPF----ETSQTQMGFALIHQNTSANTTTTTTTGERRGRRSKQAEPGRFLG 57

Query: 57  VRRRPWGRYAAEIRDPTTKERHWLGTFDTAHEAALAYDRAALSMKGAQARTNFIYTDNGT 116
           VRRRPWGRYAAEIRDPTTKERHWLGTFDTAHEAALAYDRAALSM+G QARTNF+YT    
Sbjct: 58  VRRRPWGRYAAEIRDPTTKERHWLGTFDTAHEAALAYDRAALSMRGTQARTNFVYTPTDV 117

Query: 117 FHSLLTPFDIQALLPPP--------PQSS-QFTVQN----STSAPPQQLQPDISENNTTS 163
            H++LT  ++ +L+  P        P SS QF + +         PQQ +  + +    +
Sbjct: 118 -HTILTNPNLHSLIVSPYNNNQSFLPNSSPQFVIDHHPHYQNYHQPQQPKHTLPQTVLPA 176

Query: 164 KITITSNNETSTNETSYGSSL--------------DDTGFFFS------EPDNSNSGYLG 203
               T     S +  ++G+S               ++  FFFS         N+NSGYL 
Sbjct: 177 ASFKTPVRHQSVDIQAFGNSPQNSSSNGSLSSSLDEENNFFFSLTSEEHNKSNNNSGYLD 236

Query: 204 CIVPDSCLNPPSNHQANSNSGASNDQKSFCSIMDTTSTVLPTEPYMAGDFSYFGEFNDGF 263
           CIVP+ CL PP       N   +    SF + + + +    +EPY        G F++ +
Sbjct: 237 CIVPNHCLKPPPEATTTQNQAGA----SFTTPVASKA----SEPY--------GGFSNSY 280

Query: 264 WDDRQQSWEMN-------ELSAMINNPIMAEDGCSM 292
           ++D +    MN       +LSAMI N   A    SM
Sbjct: 281 FEDGEMMM-MNHHEFGSCDLSAMITNYGAAAASMSM 315

Source: Arabidopsis thaliana

Species: Arabidopsis thaliana

Genus: Arabidopsis

Family: Brassicaceae

Order: Brassicales

Phylum: Streptophyta

Superkingdom: Eukaryota

---

Prediction of Gene Ontology (GO) Terms

Close Homologs with Gene Ontology terms Detected by BLAST

Original result of BLAST against Gene Ontology (AMIGO)

ID	Length	Definition	Q cover	H cover	Identity	E-value
Query	342
TAIR|locus:2182993	348	PUCHI [Arabidopsis thaliana (t	0.333	0.327	0.730	7.7e-52
TAIR|locus:2159068	211	LEP "LEAFY PETIOLE" [Arabidops	0.260	0.421	0.656	6.4e-28
TAIR|locus:2010529	245	AT1G28160 [Arabidopsis thalian	0.239	0.334	0.615	3.6e-27
TAIR|locus:2010346	219	AT1G12890 [Arabidopsis thalian	0.222	0.347	0.679	1.1e-23
TAIR|locus:2024076	306	DRNL "DORNROSCHEN-like" [Arabi	0.172	0.192	0.762	2.6e-23
TAIR|locus:2031890	328	ESR1 "ENHANCER OF SHOOT REGENE	0.172	0.179	0.745	2.1e-20
TAIR|locus:2198978	256	AT1G80580 [Arabidopsis thalian	0.219	0.292	0.573	1.2e-19
TAIR|locus:2042496	243	ERF15 "ethylene-responsive ele	0.228	0.320	0.536	9.9e-19
TAIR|locus:2089368	248	EBP "ethylene-responsive eleme	0.213	0.294	0.493	1.1e-18
TAIR|locus:2024249	245	ERF10 "ERF domain protein 10"	0.233	0.326	0.530	4.6e-18

TAIR|locus:2182993 PUCHI [Arabidopsis thaliana (taxid:3702)]

 Score = 440 (159.9 bits), Expect = 7.7e-52, Sum P(2) = 7.7e-52
 Identities = 92/126 (73%), Positives = 102/126 (80%)

Query:     4 STSKTLD--KPFQGYDEQGQTQMGFALIQRNPNS----TSPSSEKRGRR-KQPEPGRFLG 56
             STSKTLD  KPF    E  QTQMGFALI +N ++    T+ + E+RGRR KQ EPGRFLG
Sbjct:     2 STSKTLDHNKPF----ETSQTQMGFALIHQNTSANTTTTTTTGERRGRRSKQAEPGRFLG 57

Query:    57 VRRRPWGRYAAEIRDPTTKERHWLGTFDTAHEAALAYDRAALSMKGAQARTNFIYTDNGT 116
             VRRRPWGRYAAEIRDPTTKERHWLGTFDTAHEAALAYDRAALSM+G QARTNF+YT    
Sbjct:    58 VRRRPWGRYAAEIRDPTTKERHWLGTFDTAHEAALAYDRAALSMRGTQARTNFVYTPTDV 117

Query:   117 FHSLLT 122
              H++LT
Sbjct:   118 -HTILT 122

GO:0003677 "DNA binding" evidence=IEA;ISS

GO:0003700 "sequence-specific DNA binding transcription factor activity" evidence=IEA;ISS

GO:0005634 "nucleus" evidence=ISM;ISS;IDA

GO:0006355 "regulation of transcription, DNA-dependent" evidence=IEA;ISS

GO:0009908 "flower development" evidence=IMP

GO:0010102 "lateral root morphogenesis" evidence=IMP

GO:0010432 "bract development" evidence=IGI;IMP

GO:0010451 "floral meristem growth" evidence=IMP

GO:0010582 "floral meristem determinacy" evidence=IGI;IMP

TAIR|locus:2159068 LEP "LEAFY PETIOLE" [Arabidopsis thaliana (taxid:3702)]

 Score = 312 (114.9 bits), Expect = 6.4e-28, P = 6.4e-28
 Identities = 63/96 (65%), Positives = 77/96 (80%)

Query:    34 NSTSPSSEKRGRRKQPEPG-RFLGVRRRPWGRYAAEIRDPTTKERHWLGTFDTAHEAALA 92
             N+TS  S+K+   +  + G RFLGVRRRPWGRYAAEIRDPTTKERHWLGTFDTA EAALA
Sbjct:     2 NTTSSKSKKK---QDDQVGTRFLGVRRRPWGRYAAEIRDPTTKERHWLGTFDTAEEAALA 58

Query:    93 YDRAALSMKGAQARTNFIYTD---NGTFHSLLTPFD 125
             YDRAA SM+G +ARTNF+Y+D   + +  S+++P D
Sbjct:    59 YDRAARSMRGTRARTNFVYSDMPPSSSVTSIVSPDD 94

GO:0003677 "DNA binding" evidence=IEA;ISS

GO:0003700 "sequence-specific DNA binding transcription factor activity" evidence=IEA;ISS

GO:0005634 "nucleus" evidence=ISM;ISS

GO:0006355 "regulation of transcription, DNA-dependent" evidence=IEA;ISS

GO:0009739 "response to gibberellin stimulus" evidence=IMP

GO:0010030 "positive regulation of seed germination" evidence=IMP

TAIR|locus:2010529 AT1G28160 [Arabidopsis thaliana (taxid:3702)]

 Score = 279 (103.3 bits), Expect = 3.6e-27, Sum P(2) = 3.6e-27
 Identities = 56/91 (61%), Positives = 70/91 (76%)

Query:    32 NPNSTSPSSEK-RGRRKQPEPG--------RFLGVRRRPWGRYAAEIRDPTTKERHWLGT 82
             N  S S S +  R +++QP+P         +++GVRRRPWGRYAAEIR+PTTKER+WLGT
Sbjct:     8 NAGSCSRSKKSHRQKQQQPQPQPQQHIEEIKYVGVRRRPWGRYAAEIRNPTTKERYWLGT 67

Query:    83 FDTAHEAALAYDRAALSMKGAQARTNFIYTD 113
             FDTA EAALAYDRAA S++G  ARTNF+Y+D
Sbjct:    68 FDTAEEAALAYDRAARSIRGLTARTNFVYSD 98

GO:0003677 "DNA binding" evidence=IEA;ISS

GO:0003700 "sequence-specific DNA binding transcription factor activity" evidence=IEA;ISS;TAS

GO:0005634 "nucleus" evidence=ISM;ISS

GO:0006355 "regulation of transcription, DNA-dependent" evidence=IEA;ISS

GO:0009873 "ethylene mediated signaling pathway" evidence=TAS

TAIR|locus:2010346 AT1G12890 [Arabidopsis thaliana (taxid:3702)]

 Score = 272 (100.8 bits), Expect = 1.1e-23, P = 1.1e-23
 Identities = 53/78 (67%), Positives = 62/78 (79%)

Query:    39 SSEKRGRR--KQPEPGRFLGVRRRPWGRYAAEIRDPTTKERHWLGTFDTAHEAALAYDRA 96
             SS KR  +  K+ + G++LGVRRRPWGRYAAEIR+P TKERHWLGTFDTA EAA AYD A
Sbjct:     4 SSNKRKSKEEKKLQEGKYLGVRRRPWGRYAAEIRNPFTKERHWLGTFDTAEEAAFAYDVA 63

Query:    97 ALSMKGAQARTNFIYTDN 114
             A S+ G+ A TNF YT+N
Sbjct:    64 ARSISGSLATTNFFYTEN 81

GO:0003677 "DNA binding" evidence=IEA;ISS

GO:0003700 "sequence-specific DNA binding transcription factor activity" evidence=IEA;ISS

GO:0005634 "nucleus" evidence=ISM;ISS

GO:0006355 "regulation of transcription, DNA-dependent" evidence=IEA;ISS

TAIR|locus:2024076 DRNL "DORNROSCHEN-like" [Arabidopsis thaliana (taxid:3702)]

 Score = 246 (91.7 bits), Expect = 2.6e-23, Sum P(2) = 2.6e-23
 Identities = 45/59 (76%), Positives = 51/59 (86%)

Query:    53 RFLGVRRRPWGRYAAEIRDPTTKERHWLGTFDTAHEAALAYDRAALSMKGAQARTNFIY 111
             R+ GVRRRPWGRYAAEIRDP +KER WLGTFDTA EAA AYD AA +M+G +ARTNF+Y
Sbjct:    57 RYRGVRRRPWGRYAAEIRDPLSKERRWLGTFDTAEEAACAYDCAARAMRGLKARTNFVY 115

GO:0003677 "DNA binding" evidence=IEA;ISS

GO:0003700 "sequence-specific DNA binding transcription factor activity" evidence=IEA;ISS

GO:0005634 "nucleus" evidence=ISM;ISS

GO:0006355 "regulation of transcription, DNA-dependent" evidence=IEA;ISS;IMP

GO:0051726 "regulation of cell cycle" evidence=IMP

GO:0005515 "protein binding" evidence=IPI

GO:0009733 "response to auxin stimulus" evidence=IEP

GO:0009880 "embryonic pattern specification" evidence=IMP

GO:0048825 "cotyledon development" evidence=IMP

TAIR|locus:2031890 ESR1 "ENHANCER OF SHOOT REGENERATION 1" [Arabidopsis thaliana (taxid:3702)]

 Score = 241 (89.9 bits), Expect = 2.1e-20, P = 2.1e-20
 Identities = 44/59 (74%), Positives = 50/59 (84%)

Query:    53 RFLGVRRRPWGRYAAEIRDPTTKERHWLGTFDTAHEAALAYDRAALSMKGAQARTNFIY 111
             R+ GVRRRPWGRYAAEIRDP +KER WLGTFDTA +AA AYD AA + +GA+ARTNF Y
Sbjct:    56 RYRGVRRRPWGRYAAEIRDPMSKERRWLGTFDTAEQAACAYDSAARAFRGAKARTNFTY 114

GO:0003677 "DNA binding" evidence=IEA;ISS

GO:0003700 "sequence-specific DNA binding transcription factor activity" evidence=IEA;ISS

GO:0005634 "nucleus" evidence=ISM;ISS;IDA

GO:0006355 "regulation of transcription, DNA-dependent" evidence=IEA;ISS

GO:0009735 "response to cytokinin stimulus" evidence=IEP

GO:0009887 "organ morphogenesis" evidence=IMP

GO:0010084 "specification of organ axis polarity" evidence=IMP

GO:0005515 "protein binding" evidence=IPI

GO:0009880 "embryonic pattern specification" evidence=IMP

GO:0048825 "cotyledon development" evidence=IMP

GO:0005829 "cytosol" evidence=IDA

TAIR|locus:2198978 AT1G80580 [Arabidopsis thaliana (taxid:3702)]

 Score = 234 (87.4 bits), Expect = 1.2e-19, P = 1.2e-19
 Identities = 43/75 (57%), Positives = 55/75 (73%)

Query:    36 TSPSSEKRGRRKQPEPGRFLGVRRRPWGRYAAEIRDPTTKERHWLGTFDTAHEAALAYDR 95
             T     KRGR+   + G F+GVR+RPWGR++AEIRD   + RHWLGTFDTA EAA AYD 
Sbjct:    98 TKEGGVKRGRKMPQKTGGFMGVRKRPWGRWSAEIRDRIGRCRHWLGTFDTAEEAARAYDA 157

Query:    96 AALSMKGAQARTNFI 110
             AA  ++G +A+TNF+
Sbjct:   158 AARRLRGTKAKTNFV 172

GO:0003677 "DNA binding" evidence=IEA;ISS

GO:0003700 "sequence-specific DNA binding transcription factor activity" evidence=IEA;ISS;TAS

GO:0005634 "nucleus" evidence=ISM;ISS

GO:0006355 "regulation of transcription, DNA-dependent" evidence=IEA;ISS

GO:0009873 "ethylene mediated signaling pathway" evidence=TAS

TAIR|locus:2042496 ERF15 "ethylene-responsive element binding factor 15" [Arabidopsis thaliana (taxid:3702)]

 Score = 191 (72.3 bits), Expect = 9.9e-19, Sum P(2) = 9.9e-19
 Identities = 44/82 (53%), Positives = 51/82 (62%)

Query:    29 IQRNPNSTSPSSEKRGRRKQPEPGRFLGVRRRPWGRYAAEIRDPTTKE-RHWLGTFDTAH 87
             IQ    S S   EK G     E   + GVR+RPWG++AAEIRD T    R WLGTFD A 
Sbjct:    64 IQNGDVSNSEEEEKVGI---DEERSYRGVRKRPWGKFAAEIRDSTRNGIRVWLGTFDKAE 120

Query:    88 EAALAYDRAALSMKGAQARTNF 109
             EAALAYD+AA + KG+ A  NF
Sbjct:   121 EAALAYDQAAFATKGSLATLNF 142

GO:0003677 "DNA binding" evidence=IEA;TAS

GO:0003700 "sequence-specific DNA binding transcription factor activity" evidence=IEA;ISS;TAS

GO:0005634 "nucleus" evidence=ISM

GO:0006355 "regulation of transcription, DNA-dependent" evidence=IEA;TAS

GO:0009507 "chloroplast" evidence=IDA

GO:0010200 "response to chitin" evidence=IEP

GO:0009873 "ethylene mediated signaling pathway" evidence=RCA;TAS

TAIR|locus:2089368 EBP "ethylene-responsive element binding protein" [Arabidopsis thaliana (taxid:3702)]

 Score = 189 (71.6 bits), Expect = 1.1e-18, Sum P(2) = 1.1e-18
 Identities = 39/79 (49%), Positives = 53/79 (67%)

Query:    31 RNPNSTSPSSEKRGRRKQPEPGRFLGVRRRPWGRYAAEIRDPTTKERHWLGTFDTAHEAA 90
             +   +T P   KR +RK      + G+R+RPWG++AAEIRDP    R WLGTF+TA EAA
Sbjct:    62 KKEQATEPG--KRRKRKNV----YRGIRKRPWGKWAAEIRDPRKGVRVWLGTFNTAEEAA 115

Query:    91 LAYDRAALSMKGAQARTNF 109
             +AYD AA  ++G +A+ NF
Sbjct:   116 MAYDVAAKQIRGDKAKLNF 134

GO:0003677 "DNA binding" evidence=IEA;ISS;IDA;TAS

GO:0003700 "sequence-specific DNA binding transcription factor activity" evidence=IEA;ISS;IDA;IMP;TAS

GO:0005634 "nucleus" evidence=ISM;IDA;TAS

GO:0006355 "regulation of transcription, DNA-dependent" evidence=IEA

GO:0051707 "response to other organism" evidence=IEP

GO:0005515 "protein binding" evidence=IPI

GO:0005886 "plasma membrane" evidence=IDA

GO:0008219 "cell death" evidence=IMP

GO:0010286 "heat acclimation" evidence=IMP

GO:0045893 "positive regulation of transcription, DNA-dependent" evidence=IDA

GO:0009735 "response to cytokinin stimulus" evidence=IEP

GO:0005737 "cytoplasm" evidence=IDA

GO:0009723 "response to ethylene stimulus" evidence=IEP

GO:0009753 "response to jasmonic acid stimulus" evidence=IEP

GO:0009873 "ethylene mediated signaling pathway" evidence=TAS

TAIR|locus:2024249 ERF10 "ERF domain protein 10" [Arabidopsis thaliana (taxid:3702)]

 Score = 219 (82.2 bits), Expect = 4.6e-18, P = 4.6e-18
 Identities = 43/81 (53%), Positives = 55/81 (67%)

Query:    29 IQRNPNSTSPSSEKRGRRKQPEPGRFLGVRRRPWGRYAAEIRDPTTKERHWLGTFDTAHE 88
             +++  N T   +   G  K  E  R+ GVRRRPWGRYAAEIRDP  K+R WLG+F+T  E
Sbjct:    29 VKKRKNVTKALAVNDGGEKSKEV-RYRGVRRRPWGRYAAEIRDPVKKKRVWLGSFNTGEE 87

Query:    89 AALAYDRAALSMKGAQARTNF 109
             AA AYD AA+  +G++A TNF
Sbjct:    88 AARAYDSAAIRFRGSKATTNF 108

GO:0003677 "DNA binding" evidence=IEA;TAS

GO:0003700 "sequence-specific DNA binding transcription factor activity" evidence=IEA;ISS;TAS

GO:0005634 "nucleus" evidence=ISM

GO:0006355 "regulation of transcription, DNA-dependent" evidence=IEA;TAS

GO:0009873 "ethylene mediated signaling pathway" evidence=TAS

---

Prediction of Enzyme Commission (EC) Number

EC Number Prediction by Annotation Transfer from SWISS-PROT Entries

Original result of BLAST against SWISS-PROT

No confident hit for EC number transfering in SWISSPROT detected by BLAST

EC Number Prediction by Ezypred Server

Original result from Ezypred Server

Fail to connect to Ezypred Server

EC Number Prediction by EFICAz Software

No EC number assignment, probably not an enzyme!

---

Prediction of Functionally Associated Proteins

Functionally Associated Proteins Detected by STRING

Original result from the STRING server

Fail to connect to STRING server

---

Conserved Domains and Related Protein Families

Conserved Domains Detected by RPS-BLAST

Original result of RPS-BLAST against CDD database part I

ID	Length	Definition	E-value
Query	342
smart00380	64	smart00380, AP2, DNA-binding domain in plant prote	1e-30
cd00018	61	cd00018, AP2, DNA-binding domain found in transcri	2e-29
pfam00847	53	pfam00847, AP2, AP2 domain	2e-14

>gnl|CDD|197689 smart00380, AP2, DNA-binding domain in plant proteins such as APETALA2 and EREBPs

 Score =  110 bits (277), Expect = 1e-30
 Identities = 36/62 (58%), Positives = 45/62 (72%)

Query: 53  RFLGVRRRPWGRYAAEIRDPTTKERHWLGTFDTAHEAALAYDRAALSMKGAQARTNFIYT 112
           ++ GVR+RPWG++ AEIRDP+  +R WLGTFDTA EAA AYDRAA   +G  AR NF  +
Sbjct: 1   KYRGVRQRPWGKWVAEIRDPSKGKRVWLGTFDTAEEAARAYDRAAFKFRGRSARLNFPNS 60

Query: 113 DN 114
             
Sbjct: 61  LY 62

Length = 64

>gnl|CDD|237985 cd00018, AP2, DNA-binding domain found in transcription regulators in plants such as APETALA2 and EREBP (ethylene responsive element binding protein)

 Score =  106 bits (268), Expect = 2e-29
 Identities = 36/57 (63%), Positives = 45/57 (78%)

Query: 53  RFLGVRRRPWGRYAAEIRDPTTKERHWLGTFDTAHEAALAYDRAALSMKGAQARTNF 109
           ++ GVR+RPWG++ AEIRDP+   R WLGTFDTA EAA AYDRAAL ++G+ A  NF
Sbjct: 2   KYRGVRQRPWGKWVAEIRDPSGGRRIWLGTFDTAEEAARAYDRAALKLRGSSAVLNF 58

In EREBPs the domain specifically binds to the 11bp GCC box of the ethylene response element (ERE), a promotor element essential for ethylene responsiveness. EREBPs and the C-repeat binding factor CBF1, which is involved in stress response, contain a single copy of the AP2 domain. APETALA2-like proteins, which play a role in plant development contain two copies. Length = 61

>gnl|CDD|216148 pfam00847, AP2, AP2 domain

 Score = 66.5 bits (163), Expect = 2e-14
 Identities = 26/53 (49%), Positives = 31/53 (58%), Gaps = 4/53 (7%)

Query: 53  RFLGVRRRP-WGRYAAEIRDPTT--KERHWLGTFDTAHEAALAYDRAALSMKG 102
            + GVR    WGR+ AEIRDP    K+R  LGTF T  EAA A   A L ++G
Sbjct: 2   GYKGVRYDKRWGRWVAEIRDPGEKKKKRFSLGTFGTE-EAARAAIAARLKLRG 53

This 60 amino acid residue domain can bind to DNA and is found in transcription factor proteins. Length = 53

Conserved Domains Detected by HHsearch

Original result of HHsearch against CDD database

ID	Length	Definition	Probability
Query	342
smart00380	64	AP2 DNA-binding domain in plant proteins such as A	99.83
cd00018	61	AP2 DNA-binding domain found in transcription regu	99.82
PHA00280	121	putative NHN endonuclease	99.55
PF00847	56	AP2: AP2 domain; InterPro: IPR001471 Pathogenesis-	99.13
PF14657	46	Integrase_AP2: AP2-like DNA-binding integrase doma	81.48

>smart00380 AP2 DNA-binding domain in plant proteins such as APETALA2 and EREBPs

Probab=99.83  E-value=1.8e-20  Score=141.64  Aligned_cols=63  Identities=57%  Similarity=1.002  Sum_probs=60.7

Q ss_pred             ceEEEEECCCCeEEEEEecCCCCceEecCCCCCHHHHHHHHHHHHHhhcCCccccCCCCCCCC
Q 044016           53 RFLGVRRRPWGRYAAEIRDPTTKERHWLGTFDTAHEAALAYDRAALSMKGAQARTNFIYTDNG  115 (342)
Q Consensus        53 rYRGV~~rk~GKW~AqI~~~~~gKri~LGTFdTaEEAArAYD~AAikl~G~~A~lNFp~s~y~  115 (342)
                      +|+||+++++|||+|+|+++.+++++|||+|+|+||||+|||+|+++++|.++++|||.++|+
T Consensus         1 ~~kGV~~~~~gkw~A~I~~~~~~k~~~lG~f~t~eeAa~Ayd~a~~~~~g~~a~~Nf~~~~y~   63 (64)
T smart00380        1 KYRGVRQRPWGKWVAEIRDPSKGKRVWLGTFDTAEEAARAYDRAAFKFRGRSARLNFPNSLYD   63 (64)
T ss_pred             CEeeEEeCCCCeEEEEEEecCCCcEEecCCCCCHHHHHHHHHHHHHHhcCCccccCCCCccCC
Confidence            599999988999999999998999999999999999999999999999999999999999986

>cd00018 AP2 DNA-binding domain found in transcription regulators in plants such as APETALA2 and EREBP (ethylene responsive element binding protein)

Probab=99.82  E-value=2.6e-20  Score=138.91  Aligned_cols=61  Identities=59%  Similarity=1.036  Sum_probs=57.2

Q ss_pred             CceEEEEECCCCeEEEEEecCCCCceEecCCCCCHHHHHHHHHHHHHhhcCCccccCCCCC
Q 044016           52 GRFLGVRRRPWGRYAAEIRDPTTKERHWLGTFDTAHEAALAYDRAALSMKGAQARTNFIYT  112 (342)
Q Consensus        52 SrYRGV~~rk~GKW~AqI~~~~~gKri~LGTFdTaEEAArAYD~AAikl~G~~A~lNFp~s  112 (342)
                      |+||||+++++|||+|+|+++..+|++|||+|+|+||||+|||+|+++++|.++.+|||++
T Consensus         1 s~~~GV~~~~~gkw~A~I~~~~~gk~~~lG~f~t~eeAa~Ayd~a~~~~~g~~a~~Nf~~~   61 (61)
T cd00018           1 SKYRGVRQRPWGKWVAEIRDPSGGRRIWLGTFDTAEEAARAYDRAALKLRGSSAVLNFPDS   61 (61)
T ss_pred             CCccCEEECCCCcEEEEEEeCCCCceEccCCCCCHHHHHHHHHHHHHHhcCCccccCCCCC
Confidence            5799999988999999999955599999999999999999999999999999999999964

In EREBPs the domain specifically binds to the 11bp GCC box of the ethylene response element (ERE), a promotor element essential for ethylene responsiveness. EREBPs and the C-repeat binding factor CBF1, which is involved in stress response, contain a single copy of the AP2 domain. APETALA2-like proteins, which play a role in plant development contain two copies.

>PHA00280 putative NHN endonuclease

Probab=99.55  E-value=5.1e-15  Score=126.69  Aligned_cols=81  Identities=14%  Similarity=0.159  Sum_probs=68.5

Q ss_pred             ccccccccccchhccCCCCCCCCCCCCCCCCCCCCCceEEEEECC-CCeEEEEEecCCCCceEecCCCCCHHHHHHHHHH
Q 044016           17 DEQGQTQMGFALIQRNPNSTSPSSEKRGRRKQPEPGRFLGVRRRP-WGRYAAEIRDPTTKERHWLGTFDTAHEAALAYDR   95 (342)
Q Consensus        17 d~~~~~~~~~~~~q~~~~s~s~~~~k~~rrr~~~tSrYRGV~~rk-~GKW~AqI~~~~~gKri~LGTFdTaEEAArAYD~   95 (342)
                      ++.+++..+|+.+....+..+.      +....++|+|+||++.+ .|||+|+|++  +||+++||.|+++|+|+.||+ 
T Consensus        38 ~~~dnri~NLr~~T~~eN~~N~------~~~~~N~SG~kGV~~~k~~~kw~A~I~~--~gK~~~lG~f~~~e~A~~a~~-  108 (121)
T PHA00280         38 NPLNDALDNLRLALPKENSWNM------KTPKSNTSGLKGLSWSKEREMWRGTVTA--EGKQHNFRSRDLLEVVAWIYR-  108 (121)
T ss_pred             CCCCCcHHHhhhcCHHHHhccc------CCCCCCCCCCCeeEEecCCCeEEEEEEE--CCEEEEcCCCCCHHHHHHHHH-
Confidence            3667888888888887765442      23456789999999876 7999999999  999999999999999999997 


Q ss_pred             HHHhhcCCccc
Q 044016           96 AALSMKGAQAR  106 (342)
Q Consensus        96 AAikl~G~~A~  106 (342)
                      +++++||++|+
T Consensus       109 ~~~~lhGeFa~  119 (121)
T PHA00280        109 TRRELHGQFAR  119 (121)
T ss_pred             HHHHHhhcccc
Confidence            78899999985

>PF00847 AP2: AP2 domain; InterPro: IPR001471 Pathogenesis-related genes transcriptional activator binds to the GCC-box pathogenesis-related promoter element and activates the plant's defence genes

Probab=99.13  E-value=6.9e-11  Score=86.01  Aligned_cols=52  Identities=29%  Similarity=0.379  Sum_probs=45.6

Q ss_pred             CceEEEEECC-CCeEEEEEecCCC---CceEecCCCCCHHHHHHHHHHHHHhhcCC
Q 044016           52 GRFLGVRRRP-WGRYAAEIRDPTT---KERHWLGTFDTAHEAALAYDRAALSMKGA  103 (342)
Q Consensus        52 SrYRGV~~rk-~GKW~AqI~~~~~---gKri~LGTFdTaEEAArAYD~AAikl~G~  103 (342)
                      |+|+||++.+ .++|+|+|++...   +|+++||.|+++|||++|+++++++++|+
T Consensus         1 s~~~GV~~~~~~~~W~a~i~~~~~~g~~k~f~~g~fg~~~eA~~~a~~~r~~~~~e   56 (56)
T PF00847_consen    1 SGYKGVSWDKRRGRWRAQIRVWSENGKRKRFSVGKFGFEEEAKRAAIEARKELEGE   56 (56)
T ss_dssp             SSSTTEEEETTTTEEEEEEEECCCTTEEEEEEECCCCCHHHHHHHHHHHHHHCTS-
T ss_pred             CCcEEEEEcCCCCEEEEEEEEcccCcccEEEeCccCCCHHHHHHHHHHHHHHhcCC
Confidence            5799999877 7999999998321   49999999999999999999999999874

Ethylene, chemically the simplest plant hormone, participates in a number of stress responses and developmental processes: e.g., fruit ripening, inhibition of stem and root elongation, promotion of seed germination and flowering, senescence of leaves and flowers, and sex determination []. DNA sequence elements that confer ethylene responsiveness have been shown to contain two 11bp GCC boxes, which are necessary and sufficient for transcriptional control by ethylene. Ethylene responsive element binding proteins (EREBPs) have now been identified in a variety of plants. The proteins share a similar domain of around 59 amino acids, which interacts directly with the GCC box in the ERE.; GO: 0003700 sequence-specific DNA binding transcription factor activity, 0006355 regulation of transcription, DNA-dependent; PDB: 3IGM_A 3GCC_A 1GCC_A 2GCC_A.

>PF14657 Integrase_AP2: AP2-like DNA-binding integrase domain

Probab=81.48  E-value=4.7  Score=28.73  Aligned_cols=37  Identities=19%  Similarity=0.200  Sum_probs=28.7

Q ss_pred             eEEEEEe--cCCCC--ceEecCCCCCHHHHHHHHHHHHHhh
Q 044016           64 RYAAEIR--DPTTK--ERHWLGTFDTAHEAALAYDRAALSM  100 (342)
Q Consensus        64 KW~AqI~--~~~~g--Kri~LGTFdTaEEAArAYD~AAikl  100 (342)
                      +|..+|.  .+..|  ++++-+.|.|..||..+..++...+
T Consensus         1 ~w~~~v~g~~~~~Gkrk~~~k~GF~TkkeA~~~~~~~~~~~   41 (46)
T PF14657_consen    1 TWYYRVYGYDDETGKRKQKTKRGFKTKKEAEKALAKIEAEL   41 (46)
T ss_pred             CEEEEEEEEECCCCCEEEEEcCCCCcHHHHHHHHHHHHHHH
Confidence            5888883  33244  6788899999999999998877665

---

Homologous Structure Templates

Structure Templates Detected by BLAST

Original result of BLAST against Protein Data Bank

ID	Length	Definition	E-value
Query	342
1gcc_A	63	Solution Nmr Structure Of The Complex Of Gcc-Box Bi		2e-15
2gcc_A	70	Solution Structure Of The Gcc-Box Binding Domain, N		3e-15

>pdb|1GCC|A Chain A, Solution Nmr Structure Of The Complex Of Gcc-Box Binding Domain Of Aterf1 And Gcc-Box Dna, Minimized Average Structure Length = 63

Iteration: 1
 Score = 80.1 bits (196), Expect = 2e-15,   Method: Composition-based stats.
 Identities = 36/57 (63%), Positives = 45/57 (78%), Gaps = 1/57 (1%)
Query: 54  FLGVRRRPWGRYAAEIRDPTTK-ERHWLGTFDTAHEAALAYDRAALSMKGAQARTNF 109
           + GVR+RPWG++AAEIRDP     R WLGTF+TA +AALAYDRAA  M+G++A  NF
Sbjct: 3   YRGVRQRPWGKFAAEIRDPAKNGARVWLGTFETAEDAALAYDRAAFRMRGSRALLNF 59

>pdb|2GCC|A Chain A, Solution Structure Of The Gcc-Box Binding Domain, Nmr, Minimized Mean Structure Length = 70

Iteration: 1
 Score = 79.0 bits (193), Expect = 3e-15,   Method: Composition-based stats.
 Identities = 36/57 (63%), Positives = 45/57 (78%), Gaps = 1/57 (1%)
Query: 54  FLGVRRRPWGRYAAEIRDPTTK-ERHWLGTFDTAHEAALAYDRAALSMKGAQARTNF 109
           + GVR+RPWG++AAEIRDP     R WLGTF+TA +AALAYDRAA  M+G++A  NF
Sbjct: 6   YRGVRQRPWGKFAAEIRDPAKNGARVWLGTFETAEDAALAYDRAAFRMRGSRALLNF 62
  Database: pdbaa

Structure Templates Detected by RPS-BLAST

Original result of RPS-BLAST against PDB70 database

ID	Length	Definition	E-value
Query	342
1gcc_A	63	Ethylene responsive element binding factor 1; tran	1e-33

>1gcc_A Ethylene responsive element binding factor 1; transcription factor, protein-DNA complex, ethylene inducible; HET: DNA; NMR {Arabidopsis thaliana} SCOP: d.10.1.2 PDB: 2gcc_A 3gcc_A Length = 63

 Score =  117 bits (296), Expect = 1e-33
 Identities = 36/58 (62%), Positives = 45/58 (77%), Gaps = 1/58 (1%)

Query: 53  RFLGVRRRPWGRYAAEIRDPTTK-ERHWLGTFDTAHEAALAYDRAALSMKGAQARTNF 109
            + GVR+RPWG++AAEIRDP     R WLGTF+TA +AALAYDRAA  M+G++A  NF
Sbjct: 2   HYRGVRQRPWGKFAAEIRDPAKNGARVWLGTFETAEDAALAYDRAAFRMRGSRALLNF 59

Structure Templates Detected by HHsearch

Original result of HHsearch against PDB70 database

ID	Length	Definition	Probability
Query	342
1gcc_A	63	Ethylene responsive element binding factor 1; tran	99.87
3igm_B	77	PF14_0633 protein; AP2 domain, specific transcript	90.9
1u3e_M	174	HNH homing endonuclease; HNH catalytic motif, heli	83.39
1z1b_A	356	Integrase; protein-DNA complex, DNA binding protei	81.94

>1gcc_A Ethylene responsive element binding factor 1; transcription factor, protein-DNA complex, ethylene inducible; HET: DNA; NMR {Arabidopsis thaliana} SCOP: d.10.1.2 PDB: 2gcc_A 3gcc_A

Probab=99.87  E-value=3e-23  Score=157.26  Aligned_cols=60  Identities=60%  Similarity=1.084  Sum_probs=56.6

Q ss_pred             ceEEEEECCCCeEEEEEecCCC-CceEecCCCCCHHHHHHHHHHHHHhhcCCccccCCCCC
Q 044016           53 RFLGVRRRPWGRYAAEIRDPTT-KERHWLGTFDTAHEAALAYDRAALSMKGAQARTNFIYT  112 (342)
Q Consensus        53 rYRGV~~rk~GKW~AqI~~~~~-gKri~LGTFdTaEEAArAYD~AAikl~G~~A~lNFp~s  112 (342)
                      +||||+++++|||+|+|+++.. |+++|||+|+|+||||+|||+|+++++|.+|++|||.+
T Consensus         2 ~yrGV~~r~~gkw~A~I~~~~~~g~r~~LGtf~T~eeAA~AyD~Aa~~~~G~~a~~NFp~~   62 (63)
T 1gcc_A            2 HYRGVRQRPWGKFAAEIRDPAKNGARVWLGTFETAEDAALAYDRAAFRMRGSRALLNFPLR   62 (63)
T ss_dssp             CCTTEEEETTTEEEEEEEETTTTSEEEEEEEESSHHHHHHHHHHHHHHHHSSCCCCSSCTT
T ss_pred             CcccEeeCCCCcEEEEEccccCCCeEEEeeeCCCHHHHHHHHHHHHHHhcCcccccCCCCc
Confidence            5999999889999999999864 79999999999999999999999999999999999964

>3igm_B PF14_0633 protein; AP2 domain, specific transcription FA protein-DNA complex, transcription-DNA complex; 2.20A {Plasmodium falciparum}

Probab=90.90  E-value=0.083  Score=41.87  Aligned_cols=46  Identities=17%  Similarity=0.211  Sum_probs=30.4

Q ss_pred             CCCCceEEEEECC-CCeEEEEEecCCCCceEe-------cCCC--CCHHHHHHHHHHHH
Q 044016           49 PEPGRFLGVRRRP-WGRYAAEIRDPTTKERHW-------LGTF--DTAHEAALAYDRAA   97 (342)
Q Consensus        49 ~~tSrYRGV~~rk-~GKW~AqI~~~~~gKri~-------LGTF--dTaEEAArAYD~AA   97 (342)
                      ...|+|+||+|.+ .+.|.|.-.+  +|++..       +| |  +.+.+||..|.+..
T Consensus         3 ~~~Sg~pGVsw~kR~~~WlA~W~e--~g~rrsRtF~~k~yG-f~~e~Ak~~AIef~k~l   58 (77)
T 3igm_B            3 HMSSGYPGVSWNKRMCAWLAFFYD--GASRRSRTFHPKHFN-MDKEKARLAAVEFMKTV   58 (77)
T ss_dssp             -CCSSSTTEEEETTTTEEEEEEEE--TTEEEEEEECCTTHH-HHHHHHHHHHHHHHHHT
T ss_pred             CCCCCCCcEEeecCCceEEEEEec--CCeEeeeeechhhcC-cCHHHHHHHHHHHHHHH
Confidence            4568899999887 7999999887  665432       34 4  34555555554443

>1u3e_M HNH homing endonuclease; HNH catalytic motif, helix-turn-helix DNA binding domain, PR complex, DNA binding protein-DNA complex; 2.92A {Bacillus phage SPO1} SCOP: d.4.1.3 d.285.1.1

Probab=83.39  E-value=0.18  Score=43.25  Aligned_cols=67  Identities=6%  Similarity=-0.065  Sum_probs=42.6

Q ss_pred             cccccccccchhccCCCCCCCCCCCCCCCCCCCCCceEEEEECCCCeEEEEEecCCCCceEecCCCCCHHHHHHHHH
Q 044016           18 EQGQTQMGFALIQRNPNSTSPSSEKRGRRKQPEPGRFLGVRRRPWGRYAAEIRDPTTKERHWLGTFDTAHEAALAYD   94 (342)
Q Consensus        18 ~~~~~~~~~~~~q~~~~s~s~~~~k~~rrr~~~tSrYRGV~~rk~GKW~AqI~~~~~gKri~LGTFdTaEEAArAYD   94 (342)
                      +.+++..+|..+....+.......+     ..+  ..+||.+.+.++|.+.|..  + +.++||.|+|.+|||++|.
T Consensus        80 k~nn~~~NL~~~t~~eN~~~~~~~~-----~~~--~~~g~~~~~~~k~~~vi~~--~-~~~~~~~f~s~~eAa~~~G  146 (174)
T 1u3e_M           80 KDNNLSTNLRWVTQKINVENQMSRG-----TLN--VSKAQQIAKIKNQKPIIVI--S-PDGIEKEYPSTKCACEELG  146 (174)
T ss_dssp             TTCCCGGGEEEECHHHHHHHHHHHT-----CCC--CHHHHHHHHHHTCCCEEEE--C-TTSCEEEESCHHHHHHHHT
T ss_pred             CCCCCHHHcEECCHHHHhhcccccC-----ccc--ceeeeeeccCCCCceEEEE--c-CCceEEeeCCHHHHHHHHC
Confidence            5567777777766655322211100     011  1456655224679999998  5 6778999999999999964

>1z1b_A Integrase; protein-DNA complex, DNA binding protein/DNA complex; HET: PTR; 3.80A {Enterobacteria phage lambda} SCOP: d.10.1.4 d.163.1.1 PDB: 1z1g_A 1kjk_A 2wcc_3*

Probab=81.94  E-value=1.3  Score=39.45  Aligned_cols=41  Identities=20%  Similarity=0.122  Sum_probs=30.9

Q ss_pred             EEEECCCCeEEEEEecCCCCceEecCCCCCHHHHHHHHHHHHHhh
Q 044016           56 GVRRRPWGRYAAEIRDPTTKERHWLGTFDTAHEAALAYDRAALSM  100 (342)
Q Consensus        56 GV~~rk~GKW~AqI~~~~~gKri~LGTFdTaEEAArAYD~AAikl  100 (342)
                      ||++++.|+|+.+...  +||++.+|.  |..||..+..++...+
T Consensus        15 ~v~~~~~g~~~~r~~~--~gk~~~~g~--t~~eA~~~a~~~~~~~   55 (356)
T 1z1b_A           15 NLYIRNNGYYCYRDPR--TGKEFGLGR--DRRIAITEAIQANIEL   55 (356)
T ss_dssp             TEEEETTTEEEEECTT--TCCEEEEES--CHHHHHHHHHHHHHHH
T ss_pred             cceecCCCeEEEEeec--CCeEEECCC--CHHHHHHHHHHHHHHH
Confidence            5777778899887665  788899996  8888877766554444

---

Homologous Structure Domains

Structure Domains Detected by RPS-BLAST

Original result of RPS-BLAST against SCOP70(version1.75) database

ID	Length	Definition	E-value
Query	342
d1gcca_	63	d.10.1.2 (A:) GCC-box binding domain {Mouse-ear cr	2e-28

>d1gcca_ d.10.1.2 (A:) GCC-box binding domain {Mouse-ear cress (Arabidopsis thaliana) [TaxId: 3702]} Length = 63

class: Alpha and beta proteins (a+b)
fold: DNA-binding domain
superfamily: DNA-binding domain
family: GCC-box binding domain
domain: GCC-box binding domain
species: Mouse-ear cress (Arabidopsis thaliana) [TaxId: 3702]

 Score =  102 bits (257), Expect = 2e-28
 Identities = 36/58 (62%), Positives = 45/58 (77%), Gaps = 1/58 (1%)

Query: 53  RFLGVRRRPWGRYAAEIRDPTTKE-RHWLGTFDTAHEAALAYDRAALSMKGAQARTNF 109
            + GVR+RPWG++AAEIRDP     R WLGTF+TA +AALAYDRAA  M+G++A  NF
Sbjct: 2   HYRGVRQRPWGKFAAEIRDPAKNGARVWLGTFETAEDAALAYDRAAFRMRGSRALLNF 59

Homologous Domains Detected by HHsearch

Original result of HHsearch against SCOP70(version1.75) database

ID	Length	Definition	Probability
Query	342
d1gcca_	63	GCC-box binding domain {Mouse-ear cress (Arabidops	99.88

>d1gcca_ d.10.1.2 (A:) GCC-box binding domain {Mouse-ear cress (Arabidopsis thaliana) [TaxId: 3702]}

class: Alpha and beta proteins (a+b)
fold: DNA-binding domain
superfamily: DNA-binding domain
family: GCC-box binding domain
domain: GCC-box binding domain
species: Mouse-ear cress (Arabidopsis thaliana) [TaxId: 3702]

Probab=99.88  E-value=8.7e-24  Score=159.31  Aligned_cols=60  Identities=60%  Similarity=1.087  Sum_probs=55.7

Q ss_pred             ceEEEEECCCCeEEEEEecCC-CCceEecCCCCCHHHHHHHHHHHHHhhcCCccccCCCCC
Q 044016           53 RFLGVRRRPWGRYAAEIRDPT-TKERHWLGTFDTAHEAALAYDRAALSMKGAQARTNFIYT  112 (342)
Q Consensus        53 rYRGV~~rk~GKW~AqI~~~~-~gKri~LGTFdTaEEAArAYD~AAikl~G~~A~lNFp~s  112 (342)
                      +||||+++++|||+|+|+++. +++++|||+|+|+||||+|||+||++++|.+|.+|||+.
T Consensus         2 ~yrGVr~r~~gkw~A~Ir~~~~~~~r~~LGtf~t~eeAArAYD~aa~~~~G~~a~~NFP~~   62 (63)
T d1gcca_           2 HYRGVRQRPWGKFAAEIRDPAKNGARVWLGTFETAEDAALAYDRAAFRMRGSRALLNFPLR   62 (63)
T ss_dssp             CCTTEEEETTTEEEEEEEETTTTSEEEEEEEESSHHHHHHHHHHHHHHHHSSCCCCSSCTT
T ss_pred             CcceEeECCCCCEEEEEecCCCCCcEeccccccCHHHHHHHHHHHHHHhcCCCcccCCCcc
Confidence            499999988999999999864 568999999999999999999999999999999999974