BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= 044022
(241 letters)
Database: pdbaa
62,578 sequences; 14,973,337 total letters
Searching..................................................done
>pdb|3TL8|A Chain A, The Avrptob-Bak1 Complex Reveals Two Structurally Similar
Kinaseinteracting Domains In A Single Type Iii Effector
pdb|3TL8|D Chain D, The Avrptob-Bak1 Complex Reveals Two Structurally Similar
Kinaseinteracting Domains In A Single Type Iii Effector
pdb|3TL8|G Chain G, The Avrptob-Bak1 Complex Reveals Two Structurally Similar
Kinaseinteracting Domains In A Single Type Iii Effector
pdb|3TL8|H Chain H, The Avrptob-Bak1 Complex Reveals Two Structurally Similar
Kinaseinteracting Domains In A Single Type Iii Effector
Length = 349
Score = 92.4 bits (228), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 64/220 (29%), Positives = 109/220 (49%), Gaps = 14/220 (6%)
Query: 28 HNHILKRIGCCLQTPIPILVFQSVEYGTLRDCIFGAPL--------PRLKIASDIVNSLA 79
H ++L+ G C+ +LV+ + G++ C+ P R +IA LA
Sbjct: 94 HRNLLRLRGFCMTPTERLLVYPYMANGSVASCLRERPESQPPLDWPKRQRIALGSARGLA 153
Query: 80 YLHFGFPRPIVLRNFKTQNILFNEENVAKWFDFLLSISIPEGETHITTDRVIGTRGYSAP 139
YLH I+ R+ K NIL +EE A DF L+ + + H+ V GT G+ AP
Sbjct: 154 YLHDHCDPKIIHRDVKAANILLDEEFEAVVGDFGLAKLMDYKDXHVXX-AVRGTIGHIAP 212
Query: 140 EYISICVLNEKSNVFSFGAFLFELLAGRIHIWDLLKDTHDHGCFFNEYLKNYLEDKRFTG 199
EY+S +EK++VF +G L EL+ G+ +DL + +D +++K L++K+
Sbjct: 213 EYLSTGKSSEKTDVFGYGVMLLELITGQ-RAFDLARLANDDDVMLLDWVKGLLKEKKLEA 271
Query: 200 IPAPIIVQDIPCIEKEQQLHASAQLTLECVNNSPEDRPTM 239
++ D+ K++++ Q+ L C +SP +RP M
Sbjct: 272 ----LVDVDLQGNYKDEEVEQLIQVALLCTQSSPMERPKM 307
>pdb|3UIM|A Chain A, Structural Basis For The Impact Of Phosphorylation On
Plant Receptor- Like Kinase Bak1 Activation
pdb|3ULZ|A Chain A, Crystal Structure Of Apo Bak1
Length = 326
Score = 90.5 bits (223), Expect = 7e-19, Method: Compositional matrix adjust.
Identities = 63/220 (28%), Positives = 108/220 (49%), Gaps = 14/220 (6%)
Query: 28 HNHILKRIGCCLQTPIPILVFQSVEYGTLRDCIFGAPL--------PRLKIASDIVNSLA 79
H ++L+ G C+ +LV+ + G++ C+ P R +IA LA
Sbjct: 86 HRNLLRLRGFCMTPTERLLVYPYMANGSVASCLRERPESQPPLDWPKRQRIALGSARGLA 145
Query: 80 YLHFGFPRPIVLRNFKTQNILFNEENVAKWFDFLLSISIPEGETHITTDRVIGTRGYSAP 139
YLH I+ R+ K NIL +EE A DF L+ + + H+ V G G+ AP
Sbjct: 146 YLHDHCDPKIIHRDVKAANILLDEEFEAVVGDFGLAKLMDYKDXHVXX-AVRGXIGHIAP 204
Query: 140 EYISICVLNEKSNVFSFGAFLFELLAGRIHIWDLLKDTHDHGCFFNEYLKNYLEDKRFTG 199
EY+S +EK++VF +G L EL+ G+ +DL + +D +++K L++K+
Sbjct: 205 EYLSTGKSSEKTDVFGYGVMLLELITGQ-RAFDLARLANDDDVMLLDWVKGLLKEKKLEA 263
Query: 200 IPAPIIVQDIPCIEKEQQLHASAQLTLECVNNSPEDRPTM 239
++ D+ K++++ Q+ L C +SP +RP M
Sbjct: 264 ----LVDVDLQGNYKDEEVEQLIQVALLCTQSSPMERPKM 299
>pdb|3HGK|A Chain A, Crystal Structure Of Effect Protein Avrptob Complexed With
Kinase Pto
pdb|3HGK|B Chain B, Crystal Structure Of Effect Protein Avrptob Complexed With
Kinase Pto
pdb|3HGK|C Chain C, Crystal Structure Of Effect Protein Avrptob Complexed With
Kinase Pto
pdb|3HGK|D Chain D, Crystal Structure Of Effect Protein Avrptob Complexed With
Kinase Pto
Length = 327
Score = 90.1 bits (222), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 72/223 (32%), Positives = 106/223 (47%), Gaps = 20/223 (8%)
Query: 28 HNHILKRIGCCLQTPIPILVFQSVEYGTLRDCIFGAPLP--------RLKIASDIVNSLA 79
H H++ IG C + IL+++ +E G L+ ++G+ LP RL+I L
Sbjct: 94 HPHLVSLIGFCDERNEMILIYKYMENGNLKRHLYGSDLPTMSMSWEQRLEICIGAARGLH 153
Query: 80 YLHFGFPRPIVLRNFKTQNILFNEENVAKWFDFLLSISIPE-GETHITTDRVIGTRGYSA 138
YLH R I+ R+ K+ NIL +E V K DF +S E G+TH+ V GT GY
Sbjct: 154 YLH---TRAIIHRDVKSINILLDENFVPKITDFGISKKGTELGQTHLXX-VVKGTLGYID 209
Query: 139 PEYISICVLNEKSNVFSFGAFLFELLAGRIHIWDLLKDTHDHGCFFNEYLKNYLEDKRFT 198
PEY L EKS+V+SFG LFE+L R I ++ E+ + +
Sbjct: 210 PEYFIKGRLTEKSDVYSFGVVLFEVLCARSAI---VQSLPREMVNLAEWAVESHNNGQLE 266
Query: 199 GIPAPIIVQDIPCIEKEQQLHASAQLTLECVNNSPEDRPTMVD 241
I P + I + + L ++C+ S EDRP+M D
Sbjct: 267 QIVDPNLADKI----RPESLRKFGDTAVKCLALSSEDRPSMGD 305
>pdb|2QKW|B Chain B, Structural Basis For Activation Of Plant Immunity By
Bacterial Effector Protein Avrpto
Length = 321
Score = 87.0 bits (214), Expect = 8e-18, Method: Compositional matrix adjust.
Identities = 71/223 (31%), Positives = 105/223 (47%), Gaps = 20/223 (8%)
Query: 28 HNHILKRIGCCLQTPIPILVFQSVEYGTLRDCIFGAPLP--------RLKIASDIVNSLA 79
H H++ IG C + IL+++ +E G L+ ++G+ LP RL+I L
Sbjct: 94 HPHLVSLIGFCDERNEMILIYKYMENGNLKRHLYGSDLPTMSMSWEQRLEICIGAARGLH 153
Query: 80 YLHFGFPRPIVLRNFKTQNILFNEENVAKWFDFLLSISIPE-GETHITTDRVIGTRGYSA 138
YLH R I+ R+ K+ NIL +E V K DF +S E +TH+ V GT GY
Sbjct: 154 YLH---TRAIIHRDVKSINILLDENFVPKITDFGISKKGTELDQTHLXX-VVKGTLGYID 209
Query: 139 PEYISICVLNEKSNVFSFGAFLFELLAGRIHIWDLLKDTHDHGCFFNEYLKNYLEDKRFT 198
PEY L EKS+V+SFG LFE+L R I ++ E+ + +
Sbjct: 210 PEYFIKGRLTEKSDVYSFGVVLFEVLCARSAI---VQSLPREMVNLAEWAVESHNNGQLE 266
Query: 199 GIPAPIIVQDIPCIEKEQQLHASAQLTLECVNNSPEDRPTMVD 241
I P + I + + L ++C+ S EDRP+M D
Sbjct: 267 QIVDPNLADKI----RPESLRKFGDTAVKCLALSSEDRPSMGD 305
>pdb|3P86|A Chain A, Crystal Structure Of Ctr1 Kinase Domain Mutant D676n In
Complex With Staurosporine
pdb|3P86|B Chain B, Crystal Structure Of Ctr1 Kinase Domain Mutant D676n In
Complex With Staurosporine
Length = 309
Score = 67.4 bits (163), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 47/165 (28%), Positives = 79/165 (47%), Gaps = 10/165 (6%)
Query: 6 HEYHRHTYGSCINNITYAAQMSHNHILKRIGCCLQTPIPILVFQSVEYGTLRDCIFGA-- 63
++H + + ++ H +I+ +G Q P +V + + G+L + +
Sbjct: 71 QDFHAERVNEFLREVAIMKRLRHPNIVLFMGAVTQPPNLSIVTEYLSRGSLYRLLHKSGA 130
Query: 64 -----PLPRLKIASDIVNSLAYLHFGFPRPIVLRNFKTQNILFNEENVAKWFDFLLSISI 118
RL +A D+ + YLH P PIV RN K+ N+L +++ K DF LS
Sbjct: 131 REQLDERRRLSMAYDVAKGMNYLHNRNP-PIVHRNLKSPNLLVDKKYTVKVCDFGLSRL- 188
Query: 119 PEGETHITTDRVIGTRGYSAPEYISICVLNEKSNVFSFGAFLFEL 163
+ T +++ GT + APE + NEKS+V+SFG L+EL
Sbjct: 189 -KASTFLSSKSAAGTPEWMAPEVLRDEPSNEKSDVYSFGVILWEL 232
>pdb|1O6Y|A Chain A, Catalytic Domain Of Pknb Kinase From Mycobacterium
Tuberculosis
pdb|2FUM|A Chain A, Catalytic Domain Of Protein Kinase Pknb From Mycobacterium
Tuberculosis In Complex With Mitoxantrone
pdb|2FUM|B Chain B, Catalytic Domain Of Protein Kinase Pknb From Mycobacterium
Tuberculosis In Complex With Mitoxantrone
pdb|2FUM|C Chain C, Catalytic Domain Of Protein Kinase Pknb From Mycobacterium
Tuberculosis In Complex With Mitoxantrone
pdb|2FUM|D Chain D, Catalytic Domain Of Protein Kinase Pknb From Mycobacterium
Tuberculosis In Complex With Mitoxantrone
Length = 299
Score = 64.3 bits (155), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 39/127 (30%), Positives = 66/127 (51%), Gaps = 2/127 (1%)
Query: 42 PIPILVFQSVEYGTLRDCIFG-APLPRLKIASDIVNSLAYLHFGFPRPIVLRNFKTQNIL 100
P+P +V + V+ TLRD + P+ + I ++ L+F I+ R+ K NI+
Sbjct: 106 PLPYIVMEYVDGVTLRDIVHTEGPMTPKRAIEVIADACQALNFSHQNGIIHRDVKPANIM 165
Query: 101 FNEENVAKWFDFLLSISIPEGETHIT-TDRVIGTRGYSAPEYISICVLNEKSNVFSFGAF 159
+ N K DF ++ +I + +T T VIGT Y +PE ++ +S+V+S G
Sbjct: 166 ISATNAVKVMDFGIARAIADSGNSVTQTAAVIGTAQYLSPEQARGDSVDARSDVYSLGCV 225
Query: 160 LFELLAG 166
L+E+L G
Sbjct: 226 LYEVLTG 232
>pdb|3F61|A Chain A, Crystal Structure Of M. Tuberculosis Pknb
Leu33aspVAL222ASP DOUBLE MUTANT IN COMPLEX WITH ADP
Length = 311
Score = 64.3 bits (155), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 39/127 (30%), Positives = 66/127 (51%), Gaps = 2/127 (1%)
Query: 42 PIPILVFQSVEYGTLRDCIFG-APLPRLKIASDIVNSLAYLHFGFPRPIVLRNFKTQNIL 100
P+P +V + V+ TLRD + P+ + I ++ L+F I+ R+ K NI+
Sbjct: 89 PLPYIVMEYVDGVTLRDIVHTEGPMTPKRAIEVIADACQALNFSHQNGIIHRDVKPANIM 148
Query: 101 FNEENVAKWFDFLLSISIPEGETHIT-TDRVIGTRGYSAPEYISICVLNEKSNVFSFGAF 159
+ N K DF ++ +I + +T T VIGT Y +PE ++ +S+V+S G
Sbjct: 149 ISATNAVKVMDFGIARAIADSGNSVTQTAAVIGTAQYLSPEQARGDSVDARSDVYSLGCV 208
Query: 160 LFELLAG 166
L+E+L G
Sbjct: 209 LYEVLTG 215
>pdb|3ORI|A Chain A, Mycobacterium Tuberculosis Pknb Kinase Domain L33d Mutant
(Crystal Form 1)
pdb|3ORI|B Chain B, Mycobacterium Tuberculosis Pknb Kinase Domain L33d Mutant
(Crystal Form 1)
pdb|3ORI|C Chain C, Mycobacterium Tuberculosis Pknb Kinase Domain L33d Mutant
(Crystal Form 1)
pdb|3ORI|D Chain D, Mycobacterium Tuberculosis Pknb Kinase Domain L33d Mutant
(Crystal Form 1)
pdb|3ORK|A Chain A, Mycobacterium Tuberculosis Pknb Kinase Domain L33d Mutant
(Crystal Form 2)
pdb|3ORL|A Chain A, Mycobacterium Tuberculosis Pknb Kinase Domain L33d Mutant
(Crystal Form 3)
pdb|3ORO|A Chain A, Mycobacterium Tuberculosis Pknb Kinase Domain L33d Mutant
(Crystal Form 4)
pdb|3ORP|A Chain A, Mycobacterium Tuberculosis Pknb Kinase Domain L33d Mutant
(Crystal Form 5)
pdb|3ORT|A Chain A, Mycobacterium Tuberculosis Pknb Kinase Domain L33d Mutant
(Crystal Form 6)
Length = 311
Score = 64.3 bits (155), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 39/127 (30%), Positives = 66/127 (51%), Gaps = 2/127 (1%)
Query: 42 PIPILVFQSVEYGTLRDCIFG-APLPRLKIASDIVNSLAYLHFGFPRPIVLRNFKTQNIL 100
P+P +V + V+ TLRD + P+ + I ++ L+F I+ R+ K NI+
Sbjct: 89 PLPYIVMEYVDGVTLRDIVHTEGPMTPKRAIEVIADACQALNFSHQNGIIHRDVKPANIM 148
Query: 101 FNEENVAKWFDFLLSISIPEGETHIT-TDRVIGTRGYSAPEYISICVLNEKSNVFSFGAF 159
+ N K DF ++ +I + +T T VIGT Y +PE ++ +S+V+S G
Sbjct: 149 ISATNAVKVMDFGIARAIADSGNSVTQTAAVIGTAQYLSPEQARGDSVDARSDVYSLGCV 208
Query: 160 LFELLAG 166
L+E+L G
Sbjct: 209 LYEVLTG 215
>pdb|1MRU|A Chain A, Intracellular SerTHR PROTEIN KINASE DOMAIN OF
Mycobacterium Tuberculosis Pknb.
pdb|1MRU|B Chain B, Intracellular SerTHR PROTEIN KINASE DOMAIN OF
Mycobacterium Tuberculosis Pknb
Length = 311
Score = 63.9 bits (154), Expect = 7e-11, Method: Compositional matrix adjust.
Identities = 39/127 (30%), Positives = 66/127 (51%), Gaps = 2/127 (1%)
Query: 42 PIPILVFQSVEYGTLRDCIFG-APLPRLKIASDIVNSLAYLHFGFPRPIVLRNFKTQNIL 100
P+P +V + V+ TLRD + P+ + I ++ L+F I+ R+ K NI+
Sbjct: 89 PLPYIVMEYVDGVTLRDIVHTEGPMTPKRAIEVIADACQALNFSHQNGIIHRDVKPANIM 148
Query: 101 FNEENVAKWFDFLLSISIPEGETHIT-TDRVIGTRGYSAPEYISICVLNEKSNVFSFGAF 159
+ N K DF ++ +I + +T T VIGT Y +PE ++ +S+V+S G
Sbjct: 149 ISATNAVKVMDFGIARAIADSGNSVTQTAAVIGTAQYLSPEQARGDSVDARSDVYSLGCV 208
Query: 160 LFELLAG 166
L+E+L G
Sbjct: 209 LYEVLTG 215
>pdb|3ORM|A Chain A, Mycobacterium Tuberculosis Pknb Kinase Domain D76a Mutant
Length = 311
Score = 63.9 bits (154), Expect = 7e-11, Method: Compositional matrix adjust.
Identities = 39/127 (30%), Positives = 66/127 (51%), Gaps = 2/127 (1%)
Query: 42 PIPILVFQSVEYGTLRDCIFG-APLPRLKIASDIVNSLAYLHFGFPRPIVLRNFKTQNIL 100
P+P +V + V+ TLRD + P+ + I ++ L+F I+ R+ K NI+
Sbjct: 89 PLPYIVMEYVDGVTLRDIVHTEGPMTPKRAIEVIADACQALNFSHQNGIIHRDVKPANIM 148
Query: 101 FNEENVAKWFDFLLSISIPEGETHIT-TDRVIGTRGYSAPEYISICVLNEKSNVFSFGAF 159
+ N K DF ++ +I + +T T VIGT Y +PE ++ +S+V+S G
Sbjct: 149 ISATNAVKVMDFGIARAIADSGNSVTQTAAVIGTAQYLSPEQARGDSVDARSDVYSLGCV 208
Query: 160 LFELLAG 166
L+E+L G
Sbjct: 209 LYEVLTG 215
>pdb|3F69|A Chain A, Crystal Structure Of The Mycobacterium Tuberculosis Pknb
Mutant Kinase Domain In Complex With Kt5720
pdb|3F69|B Chain B, Crystal Structure Of The Mycobacterium Tuberculosis Pknb
Mutant Kinase Domain In Complex With Kt5720
Length = 311
Score = 63.5 bits (153), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 40/127 (31%), Positives = 66/127 (51%), Gaps = 2/127 (1%)
Query: 42 PIPILVFQSVEYGTLRDCIFG-APLPRLKIASDIVNSLAYLHFGFPRPIVLRNFKTQNIL 100
P+P +V + V+ TLRD + P+ + I ++ L+F I+ R+ K NIL
Sbjct: 89 PLPYIVMEYVDGVTLRDIVHTEGPMTPKRAIEVIADACQALNFSHQNGIIHRDVKPANIL 148
Query: 101 FNEENVAKWFDFLLSISIPE-GETHITTDRVIGTRGYSAPEYISICVLNEKSNVFSFGAF 159
+ N K DF ++ +I + G + T VIGT Y +PE ++ +S+V+S G
Sbjct: 149 ISATNAVKVVDFGIARAIADSGNSVXQTAAVIGTAQYLSPEQARGDSVDARSDVYSLGCV 208
Query: 160 LFELLAG 166
L+E+L G
Sbjct: 209 LYEVLTG 215
>pdb|3PPZ|A Chain A, Crystal Structure Of Ctr1 Kinase Domain In Complex With
Staurosporine
pdb|3PPZ|B Chain B, Crystal Structure Of Ctr1 Kinase Domain In Complex With
Staurosporine
Length = 309
Score = 63.2 bits (152), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 45/165 (27%), Positives = 77/165 (46%), Gaps = 10/165 (6%)
Query: 6 HEYHRHTYGSCINNITYAAQMSHNHILKRIGCCLQTPIPILVFQSVEYGTLRDCIFGA-- 63
++H + + ++ H +I+ +G Q P +V + + G+L + +
Sbjct: 71 QDFHAERVNEFLREVAIMKRLRHPNIVLFMGAVTQPPNLSIVTEYLSRGSLYRLLHKSGA 130
Query: 64 -----PLPRLKIASDIVNSLAYLHFGFPRPIVLRNFKTQNILFNEENVAKWFDFLLSISI 118
RL +A D+ + YLH P PIV R+ K+ N+L +++ K DF LS
Sbjct: 131 REQLDERRRLSMAYDVAKGMNYLHNRNP-PIVHRDLKSPNLLVDKKYTVKVCDFGLSRL- 188
Query: 119 PEGETHITTDRVIGTRGYSAPEYISICVLNEKSNVFSFGAFLFEL 163
+ + + GT + APE + NEKS+V+SFG L+EL
Sbjct: 189 -KASXFLXSKXAAGTPEWMAPEVLRDEPSNEKSDVYSFGVILWEL 232
>pdb|4E1Z|A Chain A, Structure Of Mouse Tyk-2 Complexed To A 3-Aminoindazole
Inhibitor
Length = 291
Score = 62.8 bits (151), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 49/148 (33%), Positives = 73/148 (49%), Gaps = 13/148 (8%)
Query: 26 MSHNHILKRIGCCL-QTPIPI-LVFQSVEYGTLRD-----CIFGAPLPRLKIASDIVNSL 78
+ H HI+K GCC Q + LV + V G+LRD C+ A L L A I +
Sbjct: 68 LYHEHIVKYKGCCEDQGEKSVQLVMEYVPLGSLRDYLPRHCVGLAQL--LLFAQQICEGM 125
Query: 79 AYLHFGFPRPIVLRNFKTQNILFNEENVAKWFDFLLSISIPEG-ETHITTDRVIGTRGYS 137
AYLH + + R +N+L + + + K DF L+ ++PEG E + + +
Sbjct: 126 AYLH---AQHYIHRALAARNVLLDNDRLVKIGDFGLAKAVPEGHEYYRVREDGDSPVFWY 182
Query: 138 APEYISICVLNEKSNVFSFGAFLFELLA 165
APE + C S+V+SFG L+ELL
Sbjct: 183 APECLKECKFYYASDVWSFGVTLYELLT 210
>pdb|4E20|A Chain A, Structure Of Mouse Tyk-2 Complexed To A 3-Aminoindazole
Inhibitor
Length = 290
Score = 62.4 bits (150), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 49/148 (33%), Positives = 73/148 (49%), Gaps = 13/148 (8%)
Query: 26 MSHNHILKRIGCCL-QTPIPI-LVFQSVEYGTLRD-----CIFGAPLPRLKIASDIVNSL 78
+ H HI+K GCC Q + LV + V G+LRD C+ A L L A I +
Sbjct: 67 LYHEHIVKYKGCCEDQGEKSVQLVMEYVPLGSLRDYLPRHCVGLAQL--LLFAQQICEGM 124
Query: 79 AYLHFGFPRPIVLRNFKTQNILFNEENVAKWFDFLLSISIPEG-ETHITTDRVIGTRGYS 137
AYLH + + R +N+L + + + K DF L+ ++PEG E + + +
Sbjct: 125 AYLH---AQHYIHRALAARNVLLDNDRLVKIGDFGLAKAVPEGHEYYRVREDGDSPVFWY 181
Query: 138 APEYISICVLNEKSNVFSFGAFLFELLA 165
APE + C S+V+SFG L+ELL
Sbjct: 182 APECLKECKFYYASDVWSFGVTLYELLT 209
>pdb|3DTC|A Chain A, Crystal Structure Of Mixed-Lineage Kinase Mlk1 Complexed
With Compound 16
Length = 271
Score = 62.0 bits (149), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 47/157 (29%), Positives = 72/157 (45%), Gaps = 17/157 (10%)
Query: 24 AQMSHNHILKRIGCCLQTPIPILVFQSVEYGTLRDCIFGAPLP---RLKIASDIVNSLAY 80
A + H +I+ G CL+ P LV + G L + G +P + A I + Y
Sbjct: 61 AMLKHPNIIALRGVCLKEPNLCLVMEFARGGPLNRVLSGKRIPPDILVNWAVQIARGMNY 120
Query: 81 LHFGFPRPIVLRNFKTQNILFNEE--------NVAKWFDFLLSISIPEGETHITTD-RVI 131
LH PI+ R+ K+ NIL ++ + K DF L+ E H TT
Sbjct: 121 LHDEAIVPIIHRDLKSSNILILQKVENGDLSNKILKITDFGLA-----REWHRTTKMSAA 175
Query: 132 GTRGYSAPEYISICVLNEKSNVFSFGAFLFELLAGRI 168
G + APE I + ++ S+V+S+G L+ELL G +
Sbjct: 176 GAYAWMAPEVIRASMFSKGSDVWSYGVLLWELLTGEV 212
>pdb|2O8Y|A Chain A, Apo Irak4 Kinase Domain
pdb|2O8Y|B Chain B, Apo Irak4 Kinase Domain
Length = 298
Score = 61.2 bits (147), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 45/154 (29%), Positives = 73/154 (47%), Gaps = 11/154 (7%)
Query: 20 ITYAAQMSHNHILKRIGCCLQTPIPILVFQSVEYGTLRD---CIFGAP----LPRLKIAS 72
I A+ H ++++ +G LV+ G+L D C+ G P R KIA
Sbjct: 72 IKVXAKCQHENLVELLGFSSDGDDLCLVYVYXPNGSLLDRLSCLDGTPPLSWHXRCKIAQ 131
Query: 73 DIVNSLAYLHFGFPRPIVLRNFKTQNILFNEENVAKWFDFLLSISIPEGETHITTDRVIG 132
N + +LH + R+ K+ NIL +E AK DF L+ + + + R++G
Sbjct: 132 GAANGINFLHENHH---IHRDIKSANILLDEAFTAKISDFGLARASEKFAQXVXXSRIVG 188
Query: 133 TRGYSAPEYISICVLNEKSNVFSFGAFLFELLAG 166
T Y APE + + KS+++SFG L E++ G
Sbjct: 189 TTAYXAPEALR-GEITPKSDIYSFGVVLLEIITG 221
>pdb|2EVA|A Chain A, Structural Basis For The Interaction Of Tak1 Kinase With
Its Activating Protein Tab1
pdb|2YIY|A Chain A, Crystal Structure Of Compound 8 Bound To Tak1-Tab
Length = 307
Score = 60.8 bits (146), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 48/152 (31%), Positives = 79/152 (51%), Gaps = 15/152 (9%)
Query: 24 AQMSHNHILKRIGCCLQTPIPILVFQSVEYGTLRDCIFGA-PLPRLKIASDIV------N 76
++++H +I+K G CL P+ LV + E G+L + + GA PLP A +
Sbjct: 56 SRVNHPNIVKLYGACL-NPV-CLVMEYAEGGSLYNVLHGAEPLPYYTAAHAMSWCLQCSQ 113
Query: 77 SLAYLHFGFPRPIVLRNFKTQNILF-NEENVAKWFDFLLSISIPEGETHITTDRVIGTRG 135
+AYLH P+ ++ R+ K N+L V K DF + I +TH+T ++ G+
Sbjct: 114 GVAYLHSMQPKALIHRDLKPPNLLLVAGGTVLKICDFGTACDI---QTHMTNNK--GSAA 168
Query: 136 YSAPEYISICVLNEKSNVFSFGAFLFELLAGR 167
+ APE +EK +VFS+G L+E++ R
Sbjct: 169 WMAPEVFEGSNYSEKCDVFSWGIILWEVITRR 200
>pdb|4GS6|A Chain A, Irreversible Inhibition Of Tak1 Kinase By 5z-7-oxozeaenol
Length = 315
Score = 60.8 bits (146), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 48/152 (31%), Positives = 79/152 (51%), Gaps = 15/152 (9%)
Query: 24 AQMSHNHILKRIGCCLQTPIPILVFQSVEYGTLRDCIFGA-PLPRLKIASDIV------N 76
++++H +I+K G CL P+ LV + E G+L + + GA PLP A +
Sbjct: 57 SRVNHPNIVKLYGACL-NPV-CLVMEYAEGGSLYNVLHGAEPLPYYTAAHAMSWCLQCSQ 114
Query: 77 SLAYLHFGFPRPIVLRNFKTQNILF-NEENVAKWFDFLLSISIPEGETHITTDRVIGTRG 135
+AYLH P+ ++ R+ K N+L V K DF + I +TH+T ++ G+
Sbjct: 115 GVAYLHSMQPKALIHRDLKPPNLLLVAGGTVLKICDFGTACDI---QTHMTNNK--GSAA 169
Query: 136 YSAPEYISICVLNEKSNVFSFGAFLFELLAGR 167
+ APE +EK +VFS+G L+E++ R
Sbjct: 170 WMAPEVFEGSNYSEKCDVFSWGIILWEVITRR 201
>pdb|2NRY|A Chain A, Crystal Structure Of Irak-4
pdb|2NRY|B Chain B, Crystal Structure Of Irak-4
pdb|2NRY|C Chain C, Crystal Structure Of Irak-4
pdb|2NRY|D Chain D, Crystal Structure Of Irak-4
Length = 307
Score = 60.8 bits (146), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 46/155 (29%), Positives = 75/155 (48%), Gaps = 13/155 (8%)
Query: 20 ITYAAQMSHNHILKRIGCCLQTPIPILVFQSVEYGTLRD---CIFGAPLP-----RLKIA 71
I A+ H ++++ +G LV+ + G+L D C+ G P P R KIA
Sbjct: 81 IKVMAKCQHENLVELLGFSSDGDDLCLVYVYMPNGSLLDRLSCLDGTP-PLSWHMRCKIA 139
Query: 72 SDIVNSLAYLHFGFPRPIVLRNFKTQNILFNEENVAKWFDFLLSISIPEGETHITTDRVI 131
N + +LH + R+ K+ NIL +E AK DF L+ + + + R++
Sbjct: 140 QGAANGINFLHENHH---IHRDIKSANILLDEAFTAKISDFGLARASEKFAQTVMXSRIV 196
Query: 132 GTRGYSAPEYISICVLNEKSNVFSFGAFLFELLAG 166
GT Y APE + + KS+++SFG L E++ G
Sbjct: 197 GTTAYMAPEALR-GEITPKSDIYSFGVVLLEIITG 230
>pdb|2OIB|A Chain A, Crystal Structure Of Irak4 Kinase Domain Apo Form
pdb|2OIB|B Chain B, Crystal Structure Of Irak4 Kinase Domain Apo Form
pdb|2OIB|C Chain C, Crystal Structure Of Irak4 Kinase Domain Apo Form
pdb|2OIB|D Chain D, Crystal Structure Of Irak4 Kinase Domain Apo Form
pdb|2OIC|A Chain A, Crystal Structure Of Irak4 Kinase Domain Complexed With
Staurosporine
pdb|2OIC|B Chain B, Crystal Structure Of Irak4 Kinase Domain Complexed With
Staurosporine
pdb|2OIC|C Chain C, Crystal Structure Of Irak4 Kinase Domain Complexed With
Staurosporine
pdb|2OIC|D Chain D, Crystal Structure Of Irak4 Kinase Domain Complexed With
Staurosporine
pdb|2OID|A Chain A, Crystal Structure Of Irak4 Kinase Domain Complexed With
Amppnp
pdb|2OID|B Chain B, Crystal Structure Of Irak4 Kinase Domain Complexed With
Amppnp
pdb|2OID|C Chain C, Crystal Structure Of Irak4 Kinase Domain Complexed With
Amppnp
pdb|2OID|D Chain D, Crystal Structure Of Irak4 Kinase Domain Complexed With
Amppnp
Length = 301
Score = 60.5 bits (145), Expect = 8e-10, Method: Compositional matrix adjust.
Identities = 46/155 (29%), Positives = 75/155 (48%), Gaps = 13/155 (8%)
Query: 20 ITYAAQMSHNHILKRIGCCLQTPIPILVFQSVEYGTLRD---CIFGAPLP-----RLKIA 71
I A+ H ++++ +G LV+ + G+L D C+ G P P R KIA
Sbjct: 75 IKVMAKCQHENLVELLGFSSDGDDLCLVYVYMPNGSLLDRLSCLDGTP-PLSWHMRCKIA 133
Query: 72 SDIVNSLAYLHFGFPRPIVLRNFKTQNILFNEENVAKWFDFLLSISIPEGETHITTDRVI 131
N + +LH + R+ K+ NIL +E AK DF L+ + + + R++
Sbjct: 134 QGAANGINFLHENHH---IHRDIKSANILLDEAFTAKISDFGLARASEKFAQXVMXXRIV 190
Query: 132 GTRGYSAPEYISICVLNEKSNVFSFGAFLFELLAG 166
GT Y APE + + KS+++SFG L E++ G
Sbjct: 191 GTTAYMAPEALR-GEITPKSDIYSFGVVLLEIITG 224
>pdb|2NRU|A Chain A, Crystal Structure Of Irak-4
pdb|2NRU|B Chain B, Crystal Structure Of Irak-4
pdb|2NRU|C Chain C, Crystal Structure Of Irak-4
pdb|2NRU|D Chain D, Crystal Structure Of Irak-4
Length = 307
Score = 60.5 bits (145), Expect = 9e-10, Method: Compositional matrix adjust.
Identities = 46/155 (29%), Positives = 75/155 (48%), Gaps = 13/155 (8%)
Query: 20 ITYAAQMSHNHILKRIGCCLQTPIPILVFQSVEYGTLRD---CIFGAPLP-----RLKIA 71
I A+ H ++++ +G LV+ + G+L D C+ G P P R KIA
Sbjct: 81 IKVMAKCQHENLVELLGFSSDGDDLCLVYVYMPNGSLLDRLSCLDGTP-PLSWHMRCKIA 139
Query: 72 SDIVNSLAYLHFGFPRPIVLRNFKTQNILFNEENVAKWFDFLLSISIPEGETHITTDRVI 131
N + +LH + R+ K+ NIL +E AK DF L+ + + + R++
Sbjct: 140 QGAANGINFLHENHH---IHRDIKSANILLDEAFTAKISDFGLARASEKFAQTVMXXRIV 196
Query: 132 GTRGYSAPEYISICVLNEKSNVFSFGAFLFELLAG 166
GT Y APE + + KS+++SFG L E++ G
Sbjct: 197 GTTAYMAPEALR-GEITPKSDIYSFGVVLLEIITG 230
>pdb|3LXN|A Chain A, Structural And Thermodynamic Characterization Of The Tyk2
And Jak3 Kinase Domains In Complex With Cp-690550 And
Cmp-6
pdb|3LXP|A Chain A, Structural And Thermodynamic Characterization Of The Tyk2
And Jak3 Kinase Domains In Complex With Cp-690550 And
Cmp-6
Length = 318
Score = 58.9 bits (141), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 47/150 (31%), Positives = 70/150 (46%), Gaps = 19/150 (12%)
Query: 26 MSHNHILKRIGCCLQTPIPIL--VFQSVEYGTLRDCIFGAPLPR--------LKIASDIV 75
+ H HI+K GCC L V + V G+LRD LPR L A I
Sbjct: 90 LYHEHIIKYKGCCEDAGAASLQLVMEYVPLGSLRDY-----LPRHSIGLAQLLLFAQQIC 144
Query: 76 NSLAYLHFGFPRPIVLRNFKTQNILFNEENVAKWFDFLLSISIPEG-ETHITTDRVIGTR 134
+AYLH + + R+ +N+L + + + K DF L+ ++PEG E + +
Sbjct: 145 EGMAYLH---AQHYIHRDLAARNVLLDNDRLVKIGDFGLAKAVPEGHEXYRVREDGDSPV 201
Query: 135 GYSAPEYISICVLNEKSNVFSFGAFLFELL 164
+ APE + S+V+SFG L+ELL
Sbjct: 202 FWYAPECLKEYKFYYASDVWSFGVTLYELL 231
>pdb|3NZ0|A Chain A, Non-Phosphorylated Tyk2 Kinase With Cmp6
Length = 302
Score = 58.9 bits (141), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 48/151 (31%), Positives = 70/151 (46%), Gaps = 19/151 (12%)
Query: 26 MSHNHILKRIGCCLQTPIPIL--VFQSVEYGTLRDCIFGAPLPR--------LKIASDIV 75
+ H HI+K GCC L V + V G+LRD LPR L A I
Sbjct: 73 LYHEHIIKYKGCCEDQGEKSLQLVMEYVPLGSLRDY-----LPRHSIGLAQLLLFAQQIC 127
Query: 76 NSLAYLHFGFPRPIVLRNFKTQNILFNEENVAKWFDFLLSISIPEG-ETHITTDRVIGTR 134
+AYLH + + RN +N+L + + + K DF L+ ++PEG E + +
Sbjct: 128 EGMAYLH---AQHYIHRNLAARNVLLDNDRLVKIGDFGLAKAVPEGHEYYRVREDGDSPV 184
Query: 135 GYSAPEYISICVLNEKSNVFSFGAFLFELLA 165
+ APE + S+V+SFG L+ELL
Sbjct: 185 FWYAPECLKEYKFYYASDVWSFGVTLYELLT 215
>pdb|3NYX|A Chain A, Non-Phosphorylated Tyk2 Jh1 Domain With
Quinoline-Thiadiazole- Thiophene Inhibitor
Length = 302
Score = 58.9 bits (141), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 48/151 (31%), Positives = 70/151 (46%), Gaps = 19/151 (12%)
Query: 26 MSHNHILKRIGCCLQTPIPIL--VFQSVEYGTLRDCIFGAPLPR--------LKIASDIV 75
+ H HI+K GCC L V + V G+LRD LPR L A I
Sbjct: 73 LYHEHIIKYKGCCEDQGEKSLQLVMEYVPLGSLRDY-----LPRHSIGLAQLLLFAQQIC 127
Query: 76 NSLAYLHFGFPRPIVLRNFKTQNILFNEENVAKWFDFLLSISIPEG-ETHITTDRVIGTR 134
+AYLH + + RN +N+L + + + K DF L+ ++PEG E + +
Sbjct: 128 EGMAYLH---SQHYIHRNLAARNVLLDNDRLVKIGDFGLAKAVPEGHEYYRVREDGDSPV 184
Query: 135 GYSAPEYISICVLNEKSNVFSFGAFLFELLA 165
+ APE + S+V+SFG L+ELL
Sbjct: 185 FWYAPECLKEYKFYYASDVWSFGVTLYELLT 215
>pdb|4EQM|A Chain A, Structural Analysis Of Staphylococcus Aureus
SerineTHREONINE KINASE Pknb
pdb|4EQM|B Chain B, Structural Analysis Of Staphylococcus Aureus
SerineTHREONINE KINASE Pknb
pdb|4EQM|C Chain C, Structural Analysis Of Staphylococcus Aureus
SerineTHREONINE KINASE Pknb
pdb|4EQM|D Chain D, Structural Analysis Of Staphylococcus Aureus
SerineTHREONINE KINASE Pknb
pdb|4EQM|E Chain E, Structural Analysis Of Staphylococcus Aureus
SerineTHREONINE KINASE Pknb
pdb|4EQM|F Chain F, Structural Analysis Of Staphylococcus Aureus
SerineTHREONINE KINASE Pknb
Length = 294
Score = 57.0 bits (136), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 44/150 (29%), Positives = 76/150 (50%), Gaps = 10/150 (6%)
Query: 23 AAQMSHNHILKRIGCCLQTPIPILVFQSVEYGTLRDCIFG-APLP---RLKIASDIVNSL 78
++Q+SH +I+ I + LV + +E TL + I PL + + I++ +
Sbjct: 65 SSQLSHQNIVSMIDVDEEDDCYYLVMEYIEGPTLSEYIESHGPLSVDTAINFTNQILDGI 124
Query: 79 AYLHFGFPRPIVLRNFKTQNILFNEENVAKWFDFLLSISIPEGETHIT-TDRVIGTRGYS 137
+ H IV R+ K QNIL + K FDF ++ ++ ET +T T+ V+GT Y
Sbjct: 125 KHAH---DMRIVHRDIKPQNILIDSNKTLKIFDFGIAKAL--SETSLTQTNHVLGTVQYF 179
Query: 138 APEYISICVLNEKSNVFSFGAFLFELLAGR 167
+PE +E ++++S G L+E+L G
Sbjct: 180 SPEQAKGEATDECTDIYSIGIVLYEMLVGE 209
>pdb|3GGF|A Chain A, Crystal Structure Of Human SerineTHREONINE-Protein Kinase
Mst4 In Complex With An Quinazolin
pdb|3GGF|B Chain B, Crystal Structure Of Human SerineTHREONINE-Protein Kinase
Mst4 In Complex With An Quinazolin
Length = 301
Score = 55.5 bits (132), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 38/153 (24%), Positives = 70/153 (45%), Gaps = 8/153 (5%)
Query: 18 NNITYAAQMSHNHILKRIGCCLQTPIPILVFQSVEYGTLRDCIFGAPLPRLKIAS---DI 74
IT +Q +++ K G L+ ++ + + G+ D + P +IA+ +I
Sbjct: 70 QEITVLSQCDSSYVTKYYGSYLKGSKLWIIMEYLGGGSALDLLRAGPFDEFQIATMLKEI 129
Query: 75 VNSLAYLHFGFPRPIVLRNFKTQNILFNEENVAKWFDFLLSISIPEGETHITTDRVIGTR 134
+ L YLH + R+ K N+L +E+ K DF ++ + + T I + +GT
Sbjct: 130 LKGLDYLH---SEKKIHRDIKAANVLLSEQGDVKLADFGVAGQLTD--TQIKRNTFVGTP 184
Query: 135 GYSAPEYISICVLNEKSNVFSFGAFLFELLAGR 167
+ APE I + K++++S G EL G
Sbjct: 185 FWMAPEVIQQSAYDSKADIWSLGITAIELAKGE 217
>pdb|3S95|A Chain A, Crystal Structure Of The Human Limk1 Kinase Domain In
Complex With Staurosporine
pdb|3S95|B Chain B, Crystal Structure Of The Human Limk1 Kinase Domain In
Complex With Staurosporine
Length = 310
Score = 55.1 bits (131), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 57/203 (28%), Positives = 89/203 (43%), Gaps = 22/203 (10%)
Query: 7 EYHRHTYGSCINNITYAAQMSHNHILKRIGCCLQTPIPILVFQSVEYGTLRDCI--FGAP 64
+ T + + + + H ++LK IG + + + ++ GTLR I +
Sbjct: 45 RFDEETQRTFLKEVKVMRCLEHPNVLKFIGVLYKDKRLNFITEYIKGGTLRGIIKSMDSQ 104
Query: 65 LP---RLKIASDIVNSLAYLHFGFPRPIVLRNFKTQNILFNEENVAKWFDFLLS------ 115
P R+ A DI + +AYLH I+ R+ + N L E DF L+
Sbjct: 105 YPWSQRVSFAKDIASGMAYLH---SMNIIHRDLNSHNCLVRENKNVVVADFGLARLMVDE 161
Query: 116 ISIPEGETHITT-DR-----VIGTRGYSAPEYISICVLNEKSNVFSFGAFLFELLAGRIH 169
+ PEG + DR V+G + APE I+ +EK +VFSFG L E++ GR++
Sbjct: 162 KTQPEGLRSLKKPDRKKRYTVVGNPYWMAPEMINGRSYDEKVDVFSFGIVLCEII-GRVN 220
Query: 170 I-WDLLKDTHDHGCFFNEYLKNY 191
D L T D G +L Y
Sbjct: 221 ADPDYLPRTMDFGLNVRGFLDRY 243
>pdb|3MIY|A Chain A, X-Ray Crystal Structure Of Itk Complexed With Sunitinib
pdb|3MIY|B Chain B, X-Ray Crystal Structure Of Itk Complexed With Sunitinib
pdb|3MJ1|A Chain A, X-Ray Crystal Structure Of Itk Complexed With Inhibitor
Ro5191614
pdb|3MJ2|A Chain A, X-Ray Crystal Structure Of Itk Complexed With Inhibitor
Bms-509744
Length = 266
Score = 53.9 bits (128), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 42/161 (26%), Positives = 77/161 (47%), Gaps = 16/161 (9%)
Query: 17 INNITYAAQMSHNHILKRIGCCLQTPIPILVFQSVEYGTLRDCI-----FGAPLPRLKIA 71
I ++SH +++ G CL+ LVF+ +E+G L D + A L +
Sbjct: 50 IEEAEVMMKLSHPKLVQLYGVCLEQAPICLVFEFMEHGCLSDYLRTQRGLFAAETLLGMC 109
Query: 72 SDIVNSLAYLHFGFPRPIVLRNFKTQNILFNEENVAKWFDFLLSISIPEGETHITTDRVI 131
D+ +AYL ++ R+ +N L E V K DF ++ + + + +T
Sbjct: 110 LDVCEGMAYLE---EASVIHRDLAARNCLVGENQVIKVSDFGMTRFVLDDQYTSST---- 162
Query: 132 GTR---GYSAPEYISICVLNEKSNVFSFGAFLFELLA-GRI 168
GT+ +++PE S + KS+V+SFG ++E+ + G+I
Sbjct: 163 GTKFPVKWASPEVFSFSRYSSKSDVWSFGVLMWEVFSEGKI 203
>pdb|1FOT|A Chain A, Structure Of The Unliganded Camp-Dependent Protein Kinase
Catalytic Subunit From Saccharomyces Cerevisiae
Length = 318
Score = 53.9 bits (128), Expect = 9e-08, Method: Compositional matrix adjust.
Identities = 48/180 (26%), Positives = 82/180 (45%), Gaps = 21/180 (11%)
Query: 26 MSHNHILKRIGCCLQTPIPILVFQSVEYGTLRDCIFGA---PLPRLKI-ASDIVNSLAYL 81
++H I++ G ++ +E G L + + P P K A+++ +L YL
Sbjct: 63 VTHPFIIRMWGTFQDAQQIFMIMDYIEGGELFSLLRKSQRFPNPVAKFYAAEVCLALEYL 122
Query: 82 HFGFPRPIVLRNFKTQNILFNEENVAKWFDFLLSISIPEGETHITTDRVIGTRGYSAPEY 141
H + I+ R+ K +NIL ++ K DF + +P+ T + GT Y APE
Sbjct: 123 H---SKDIIYRDLKPENILLDKNGHIKITDFGFAKYVPD-----VTYXLCGTPDYIAPEV 174
Query: 142 ISICVLNEKSNVFSFGAFLFELLAGRIHIWD---------LLKDTHDHGCFFNEYLKNYL 192
+S N+ + +SFG ++E+LAG +D +L FFNE +K+ L
Sbjct: 175 VSTKPYNKSIDWWSFGILIYEMLAGYTPFYDSNTMKTYEKILNAELRFPPFFNEDVKDLL 234
>pdb|3A7F|A Chain A, Human Mst3 Kinase
pdb|3A7G|A Chain A, Human Mst3 Kinase
pdb|3A7G|B Chain B, Human Mst3 Kinase
pdb|3A7H|A Chain A, Human Mst3 Kinase In Complex With Atp
pdb|3A7H|B Chain B, Human Mst3 Kinase In Complex With Atp
pdb|3A7I|A Chain A, Human Mst3 Kinase In Complex With Adenine
pdb|3A7J|A Chain A, Human Mst3 Kinase In Complex With Mnadp
Length = 303
Score = 53.5 bits (127), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 39/153 (25%), Positives = 69/153 (45%), Gaps = 8/153 (5%)
Query: 18 NNITYAAQMSHNHILKRIGCCLQTPIPILVFQSVEYGTLRDCIFGAPLPRLKIAS---DI 74
IT +Q ++ K G L+ ++ + + G+ D + PL +IA+ +I
Sbjct: 69 QEITVLSQCDSPYVTKYYGSYLKDTKLWIIMEYLGGGSALDLLEPGPLDETQIATILREI 128
Query: 75 VNSLAYLHFGFPRPIVLRNFKTQNILFNEENVAKWFDFLLSISIPEGETHITTDRVIGTR 134
+ L YLH + R+ K N+L +E K DF ++ + +T I + +GT
Sbjct: 129 LKGLDYLH---SEKKIHRDIKAANVLLSEHGEVKLADFGVAGQL--TDTQIKRNXFVGTP 183
Query: 135 GYSAPEYISICVLNEKSNVFSFGAFLFELLAGR 167
+ APE I + K++++S G EL G
Sbjct: 184 FWMAPEVIKQSAYDSKADIWSLGITAIELARGE 216
>pdb|1SM2|A Chain A, Crystal Structure Of The Phosphorylated Interleukin-2
Tyrosine Kinase Catalytic Domain
pdb|1SM2|B Chain B, Crystal Structure Of The Phosphorylated Interleukin-2
Tyrosine Kinase Catalytic Domain
pdb|1SNU|A Chain A, Crystal Structure Of The Unphosphorylated Interleukin-2
Tyrosine Kinase Catalytic Domain
pdb|1SNU|B Chain B, Crystal Structure Of The Unphosphorylated Interleukin-2
Tyrosine Kinase Catalytic Domain
pdb|1SNX|A Chain A, Crystal Structure Of Apo Interleukin-2 Tyrosine Kinase
Catalytic Domain
pdb|1SNX|B Chain B, Crystal Structure Of Apo Interleukin-2 Tyrosine Kinase
Catalytic Domain
Length = 264
Score = 53.5 bits (127), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 42/161 (26%), Positives = 77/161 (47%), Gaps = 16/161 (9%)
Query: 17 INNITYAAQMSHNHILKRIGCCLQTPIPILVFQSVEYGTLRDCI-----FGAPLPRLKIA 71
I ++SH +++ G CL+ LVF+ +E+G L D + A L +
Sbjct: 48 IEEAEVMMKLSHPKLVQLYGVCLEQAPICLVFEFMEHGCLSDYLRTQRGLFAAETLLGMC 107
Query: 72 SDIVNSLAYLHFGFPRPIVLRNFKTQNILFNEENVAKWFDFLLSISIPEGETHITTDRVI 131
D+ +AYL ++ R+ +N L E V K DF ++ + + + +T
Sbjct: 108 LDVCEGMAYLE---EACVIHRDLAARNCLVGENQVIKVSDFGMTRFVLDDQYTSST---- 160
Query: 132 GTR---GYSAPEYISICVLNEKSNVFSFGAFLFELLA-GRI 168
GT+ +++PE S + KS+V+SFG ++E+ + G+I
Sbjct: 161 GTKFPVKWASPEVFSFSRYSSKSDVWSFGVLMWEVFSEGKI 201
>pdb|4HCT|A Chain A, Crystal Structure Of Itk In Complex With Compound 52
pdb|4HCU|A Chain A, Crystal Structure Of Itk In Complext With Compound 40
pdb|4HCV|A Chain A, Crystal Structure Of Itk In Complex With Compound 53
Length = 269
Score = 53.5 bits (127), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 40/158 (25%), Positives = 75/158 (47%), Gaps = 10/158 (6%)
Query: 17 INNITYAAQMSHNHILKRIGCCLQTPIPILVFQSVEYGTLRDCI-----FGAPLPRLKIA 71
I ++SH +++ G CL+ LVF+ +E+G L D + A L +
Sbjct: 53 IEEAEVMMKLSHPKLVQLYGVCLEQAPICLVFEFMEHGCLSDYLRTQRGLFAAETLLGMC 112
Query: 72 SDIVNSLAYLHFGFPRPIVLRNFKTQNILFNEENVAKWFDFLLSISIPEGETHITTDRVI 131
D+ +AYL ++ R+ +N L E V K DF ++ + + + +T
Sbjct: 113 LDVCEGMAYLE---EACVIHRDLAARNCLVGENQVIKVSDFGMTRFVLDDQYTSSTGTKF 169
Query: 132 GTRGYSAPEYISICVLNEKSNVFSFGAFLFELLA-GRI 168
+ +++PE S + KS+V+SFG ++E+ + G+I
Sbjct: 170 PVK-WASPEVFSFSRYSSKSDVWSFGVLMWEVFSEGKI 206
>pdb|3V5J|A Chain A, Crystal Structure Of Interleukin-2 Inducible T-Cell Kinase
Itk Catalytic Domain With Thienopyrazolylindole
Inhibitor 090
pdb|3V5J|B Chain B, Crystal Structure Of Interleukin-2 Inducible T-Cell Kinase
Itk Catalytic Domain With Thienopyrazolylindole
Inhibitor 090
pdb|3V5L|A Chain A, Crystal Structure Of Interleukin-2 Inducible T-Cell Kinase
Itk Catalytic Domain With Thienopyrazolylindole
Inhibitor 542
pdb|3V5L|B Chain B, Crystal Structure Of Interleukin-2 Inducible T-Cell Kinase
Itk Catalytic Domain With Thienopyrazolylindole
Inhibitor 542
pdb|3V5L|C Chain C, Crystal Structure Of Interleukin-2 Inducible T-Cell Kinase
Itk Catalytic Domain With Thienopyrazolylindole
Inhibitor 542
pdb|3V5L|D Chain D, Crystal Structure Of Interleukin-2 Inducible T-Cell Kinase
Itk Catalytic Domain With Thienopyrazolylindole
Inhibitor 542
pdb|3V8T|A Chain A, Crystal Structure Of Interleukin-2 Inducible T-Cell Kinase
Itk Catalytic Domain With Thienopyrazolylindole
Inhibitor 477
pdb|3V8T|B Chain B, Crystal Structure Of Interleukin-2 Inducible T-Cell Kinase
Itk Catalytic Domain With Thienopyrazolylindole
Inhibitor 477
pdb|3V8W|A Chain A, Crystal Structure Of Interleukin-2 Inducible T-Cell Kinase
Itk Catalytic Domain With Thienopyrazolylindole
Inhibitor 469
pdb|3V8W|B Chain B, Crystal Structure Of Interleukin-2 Inducible T-Cell Kinase
Itk Catalytic Domain With Thienopyrazolylindole
Inhibitor 469
Length = 266
Score = 53.5 bits (127), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 42/161 (26%), Positives = 77/161 (47%), Gaps = 16/161 (9%)
Query: 17 INNITYAAQMSHNHILKRIGCCLQTPIPILVFQSVEYGTLRDCI-----FGAPLPRLKIA 71
I ++SH +++ G CL+ LVF+ +E+G L D + A L +
Sbjct: 50 IEEAEVMMKLSHPKLVQLYGVCLEQAPICLVFEFMEHGCLSDYLRTQRGLFAAETLLGMC 109
Query: 72 SDIVNSLAYLHFGFPRPIVLRNFKTQNILFNEENVAKWFDFLLSISIPEGETHITTDRVI 131
D+ +AYL ++ R+ +N L E V K DF ++ + + + +T
Sbjct: 110 LDVCEGMAYLE---EACVIHRDLAARNCLVGENQVIKVSDFGMTRFVLDDQYTSST---- 162
Query: 132 GTR---GYSAPEYISICVLNEKSNVFSFGAFLFELLA-GRI 168
GT+ +++PE S + KS+V+SFG ++E+ + G+I
Sbjct: 163 GTKFPVKWASPEVFSFSRYSSKSDVWSFGVLMWEVFSEGKI 203
>pdb|3CKX|A Chain A, Crystal Structure Of Sterile 20-Like Kinase 3 (Mst3,
Stk24) In Complex With Staurosporine
Length = 304
Score = 53.1 bits (126), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 39/152 (25%), Positives = 69/152 (45%), Gaps = 8/152 (5%)
Query: 18 NNITYAAQMSHNHILKRIGCCLQTPIPILVFQSVEYGTLRDCIFGAPLPRLKIAS---DI 74
IT +Q ++ K G L+ ++ + + G+ D + PL +IA+ +I
Sbjct: 54 QEITVLSQCDSPYVTKYYGSYLKDTKLWIIMEYLGGGSALDLLEPGPLDETQIATILREI 113
Query: 75 VNSLAYLHFGFPRPIVLRNFKTQNILFNEENVAKWFDFLLSISIPEGETHITTDRVIGTR 134
+ L YLH + R+ K N+L +E K DF ++ + +T I + +GT
Sbjct: 114 LKGLDYLH---SEKKIHRDIKAANVLLSEHGEVKLADFGVAGQLT--DTQIKRNXFVGTP 168
Query: 135 GYSAPEYISICVLNEKSNVFSFGAFLFELLAG 166
+ APE I + K++++S G EL G
Sbjct: 169 FWMAPEVIKQSAYDSKADIWSLGITAIELARG 200
>pdb|3QGW|A Chain A, Crystal Structure Of Itk Kinase Bound To An Inhibitor
pdb|3QGW|B Chain B, Crystal Structure Of Itk Kinase Bound To An Inhibitor
pdb|3QGY|A Chain A, Crystal Structure Of Itk Inhibitor Complex
pdb|3QGY|B Chain B, Crystal Structure Of Itk Inhibitor Complex
Length = 286
Score = 53.1 bits (126), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 40/158 (25%), Positives = 75/158 (47%), Gaps = 10/158 (6%)
Query: 17 INNITYAAQMSHNHILKRIGCCLQTPIPILVFQSVEYGTLRDCI-----FGAPLPRLKIA 71
I ++SH +++ G CL+ LVF+ +E+G L D + A L +
Sbjct: 70 IEEAEVMMKLSHPKLVQLYGVCLEQAPICLVFEFMEHGCLSDYLRTQRGLFAAETLLGMC 129
Query: 72 SDIVNSLAYLHFGFPRPIVLRNFKTQNILFNEENVAKWFDFLLSISIPEGETHITTDRVI 131
D+ +AYL ++ R+ +N L E V K DF ++ + + + +T
Sbjct: 130 LDVCEGMAYLE---EACVIHRDLAARNCLVGENQVIKVSDFGMTRFVLDDQYTSSTGTKF 186
Query: 132 GTRGYSAPEYISICVLNEKSNVFSFGAFLFELLA-GRI 168
+ +++PE S + KS+V+SFG ++E+ + G+I
Sbjct: 187 PVK-WASPEVFSFSRYSSKSDVWSFGVLMWEVFSEGKI 223
>pdb|3CKW|A Chain A, Crystal Structure Of Sterile 20-Like Kinase 3 (Mst3,
Stk24)
Length = 304
Score = 53.1 bits (126), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 39/153 (25%), Positives = 69/153 (45%), Gaps = 8/153 (5%)
Query: 18 NNITYAAQMSHNHILKRIGCCLQTPIPILVFQSVEYGTLRDCIFGAPLPRLKIAS---DI 74
IT +Q ++ K G L+ ++ + + G+ D + PL +IA+ +I
Sbjct: 54 QEITVLSQCDSPYVTKYYGSYLKDTKLWIIMEYLGGGSALDLLEPGPLDETQIATILREI 113
Query: 75 VNSLAYLHFGFPRPIVLRNFKTQNILFNEENVAKWFDFLLSISIPEGETHITTDRVIGTR 134
+ L YLH + R+ K N+L +E K DF ++ + +T I + +GT
Sbjct: 114 LKGLDYLH---SEKKIHRDIKAANVLLSEHGEVKLADFGVAGQLT--DTQIKRNTFVGTP 168
Query: 135 GYSAPEYISICVLNEKSNVFSFGAFLFELLAGR 167
+ APE I + K++++S G EL G
Sbjct: 169 FWMAPEVIKQSAYDSKADIWSLGITAIELARGE 201
>pdb|3ZHP|C Chain C, Human Mst3 (stk24) In Complex With Mo25beta
pdb|3ZHP|D Chain D, Human Mst3 (stk24) In Complex With Mo25beta
Length = 294
Score = 52.8 bits (125), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 39/153 (25%), Positives = 69/153 (45%), Gaps = 8/153 (5%)
Query: 18 NNITYAAQMSHNHILKRIGCCLQTPIPILVFQSVEYGTLRDCIFGAPLPRLKIAS---DI 74
IT +Q ++ K G L+ ++ + + G+ D + PL +IA+ +I
Sbjct: 74 QEITVLSQCDSPYVTKYYGSYLKDTKLWIIMEYLGGGSALDLLEPGPLDETQIATILREI 133
Query: 75 VNSLAYLHFGFPRPIVLRNFKTQNILFNEENVAKWFDFLLSISIPEGETHITTDRVIGTR 134
+ L YLH + R+ K N+L +E K DF ++ + +T I + +GT
Sbjct: 134 LKGLDYLH---SEKKIHRDIKAANVLLSEHGEVKLADFGVAGQLT--DTQIKRNTFVGTP 188
Query: 135 GYSAPEYISICVLNEKSNVFSFGAFLFELLAGR 167
+ APE I + K++++S G EL G
Sbjct: 189 FWMAPEVIKQSAYDSKADIWSLGITAIELARGE 221
>pdb|2XIK|A Chain A, Structure Of Human Ysk1 (Yeast Sps1-Ste20-Related Kinase
1)
Length = 294
Score = 52.0 bits (123), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 39/152 (25%), Positives = 70/152 (46%), Gaps = 8/152 (5%)
Query: 18 NNITYAAQMSHNHILKRIGCCLQTPIPILVFQSVEYGTLRDCIFGAPLPRLKIAS---DI 74
IT +Q +I + G L++ ++ + + G+ D + PL IA+ +I
Sbjct: 66 QEITVLSQCDSPYITRYFGSYLKSTKLWIIMEYLGGGSALDLLKPGPLEETYIATILREI 125
Query: 75 VNSLAYLHFGFPRPIVLRNFKTQNILFNEENVAKWFDFLLSISIPEGETHITTDRVIGTR 134
+ L YLH + R+ K N+L +E+ K DF ++ + +T I + +GT
Sbjct: 126 LKGLDYLH---SERKIHRDIKAANVLLSEQGDVKLADFGVAGQLT--DTQIKRNXFVGTP 180
Query: 135 GYSAPEYISICVLNEKSNVFSFGAFLFELLAG 166
+ APE I + K++++S G EL G
Sbjct: 181 FWMAPEVIKQSAYDFKADIWSLGITAIELAKG 212
>pdb|3T9T|A Chain A, Crystal Structure Of Btk Mutant (F435t,K596r) Complexed
With Imidazo[1,5-A]quinoxaline
Length = 267
Score = 50.4 bits (119), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 41/161 (25%), Positives = 76/161 (47%), Gaps = 16/161 (9%)
Query: 17 INNITYAAQMSHNHILKRIGCCLQTPIPILVFQSVEYGTLRDCI-----FGAPLPRLKIA 71
I ++SH +++ G CL+ LV + +E+G L D + A L +
Sbjct: 51 IEEAEVMMKLSHPKLVQLYGVCLEQAPICLVTEFMEHGCLSDYLRTQRGLFAAETLLGMC 110
Query: 72 SDIVNSLAYLHFGFPRPIVLRNFKTQNILFNEENVAKWFDFLLSISIPEGETHITTDRVI 131
D+ +AYL ++ R+ +N L E V K DF ++ + + + +T
Sbjct: 111 LDVCEGMAYLE---EACVIHRDLAARNCLVGENQVIKVSDFGMTRFVLDDQYTSST---- 163
Query: 132 GTR---GYSAPEYISICVLNEKSNVFSFGAFLFELLA-GRI 168
GT+ +++PE S + KS+V+SFG ++E+ + G+I
Sbjct: 164 GTKFPVKWASPEVFSFSRYSSKSDVWSFGVLMWEVFSEGKI 204
>pdb|3TXO|A Chain A, Pkc Eta Kinase In Complex With A Naphthyridine
Length = 353
Score = 50.1 bits (118), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 43/149 (28%), Positives = 70/149 (46%), Gaps = 15/149 (10%)
Query: 26 MSHNH-ILKRIGCCLQTPIPIL-VFQSVEYGTL-----RDCIFGAPLPRLKIASDIVNSL 78
++ NH L ++ CC QTP + V + V G L + F R A++I+++L
Sbjct: 79 LARNHPFLTQLFCCFQTPDRLFFVMEFVNGGDLMFHIQKSRRFDEARARF-YAAEIISAL 137
Query: 79 AYLHFGFPRPIVLRNFKTQNILFNEENVAKWFDF-LLSISIPEGETHITTDRVIGTRGYS 137
+LH + I+ R+ K N+L + E K DF + I G +TT GT Y
Sbjct: 138 MFLH---DKGIIYRDLKLDNVLLDHEGHCKLADFGMCKEGICNG---VTTATFCGTPDYI 191
Query: 138 APEYISICVLNEKSNVFSFGAFLFELLAG 166
APE + + + ++ G L+E+L G
Sbjct: 192 APEILQEMLYGPAVDWWAMGVLLYEMLCG 220
>pdb|4BBE|A Chain A, Aminoalkylpyrimidine Inhibitor Complexes With Jak2
pdb|4BBE|B Chain B, Aminoalkylpyrimidine Inhibitor Complexes With Jak2
pdb|4BBE|C Chain C, Aminoalkylpyrimidine Inhibitor Complexes With Jak2
pdb|4BBE|D Chain D, Aminoalkylpyrimidine Inhibitor Complexes With Jak2
pdb|4BBF|A Chain A, Aminoalkylpyrimidine Inhibitor Complexes With Jak2
pdb|4BBF|B Chain B, Aminoalkylpyrimidine Inhibitor Complexes With Jak2
pdb|4BBF|C Chain C, Aminoalkylpyrimidine Inhibitor Complexes With Jak2
pdb|4BBF|D Chain D, Aminoalkylpyrimidine Inhibitor Complexes With Jak2
Length = 298
Score = 49.7 bits (117), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 45/158 (28%), Positives = 71/158 (44%), Gaps = 19/158 (12%)
Query: 20 ITYAAQMSHNHILKRIGCCLQTPIP--ILVFQSVEYGTLRDCIFGAP-----LPRLKIAS 72
I + H++I+K G C L+ + + YG+LRD + + L+ S
Sbjct: 63 IEILKSLQHDNIVKYKGVCYSAGRRNLKLIMEYLPYGSLRDYLQKHKERIDHIKLLQYTS 122
Query: 73 DIVNSLAYLHFGFPRPIVLRNFKTQNILFNEENVAKWFDFLLSISIPEGETHITTDRVIG 132
I + YL G R + RN T+NIL EN K DF L+ +P+ + + +
Sbjct: 123 QICKGMEYL--GTKR-YIHRNLATRNILVENENRVKIGDFGLTKVLPQDKEYYK----VK 175
Query: 133 TRGYS-----APEYISICVLNEKSNVFSFGAFLFELLA 165
G S APE ++ + S+V+SFG L+EL
Sbjct: 176 EPGESPIFWYAPESLTESKFSVASDVWSFGVVLYELFT 213
>pdb|3D7T|A Chain A, Structural Basis For The Recognition Of C-Src By Its
Inactivator Csk
Length = 269
Score = 48.9 bits (115), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 41/153 (26%), Positives = 76/153 (49%), Gaps = 18/153 (11%)
Query: 25 QMSHNHILKRIGCCLQTPIPI-LVFQSVEYGTLRD-------CIFGAPLPRLKIASDIVN 76
Q+ H+++++ +G ++ + +V + + G+L D + G LK + D+
Sbjct: 61 QLRHSNLVQLLGVIVEEKGGLYIVTEYMAKGSLVDYLRSRGRSVLGGDC-LLKFSLDVCE 119
Query: 77 SLAYLHFGFPRPIVLRNFKTQNILFNEENVAKWFDFLLSISIPEGETHITTDRVIGTRGY 136
++ YL V R+ +N+L +E+NVAK DF L+ E T D +
Sbjct: 120 AMEYLE---GNNFVHRDLAARNVLVSEDNVAKVSDFGLT-----KEASSTQDTGKLPVKW 171
Query: 137 SAPEYISICVLNEKSNVFSFGAFLFELLA-GRI 168
+APE + + KS+V+SFG L+E+ + GR+
Sbjct: 172 TAPEALREAAFSTKSDVWSFGILLWEIYSFGRV 204
>pdb|1OMW|A Chain A, Crystal Structure Of The Complex Between G Protein-Coupled
Receptor Kinase 2 And Heterotrimeric G Protein Beta 1
And Gamma 2 Subunits
pdb|1YM7|A Chain A, G Protein-Coupled Receptor Kinase 2 (Grk2)
pdb|1YM7|B Chain B, G Protein-Coupled Receptor Kinase 2 (Grk2)
pdb|1YM7|C Chain C, G Protein-Coupled Receptor Kinase 2 (Grk2)
pdb|1YM7|D Chain D, G Protein-Coupled Receptor Kinase 2 (Grk2)
pdb|2BCJ|A Chain A, Crystal Structure Of G Protein-coupled Receptor Kinase 2
In Complex With Galpha-q And Gbetagamma Subunits
pdb|3UZS|A Chain A, Structure Of The C13.28 Rna Aptamer Bound To The G
Protein-Coupled Receptor Kinase 2-Heterotrimeric G
Protein Beta 1 And Gamma 2 Subunit Complex
pdb|3UZT|A Chain A, Structure Of The C13.18 Rna Aptamer In Complex With G
Protein-Coupled Receptor Kinase 2
Length = 689
Score = 48.9 bits (115), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 32/97 (32%), Positives = 50/97 (51%), Gaps = 8/97 (8%)
Query: 71 ASDIVNSLAYLHFGFPRPIVLRNFKTQNILFNEENVAKWFDFLLSISIPEGETHITTDRV 130
A++I+ L ++H F +V R+ K NIL +E + D L+ + + H +
Sbjct: 298 AAEIILGLEHMHNRF---VVYRDLKPANILLDEHGHVRISDLGLACDFSKKKPHAS---- 350
Query: 131 IGTRGYSAPEYISICVLNEKS-NVFSFGAFLFELLAG 166
+GT GY APE + V + S + FS G LF+LL G
Sbjct: 351 VGTHGYMAPEVLQKGVAYDSSADWFSLGCMLFKLLRG 387
>pdb|3PSC|A Chain A, Bovine Grk2 In Complex With Gbetagamma Subunits
pdb|3PVU|A Chain A, Bovine Grk2 In Complex With Gbetagamma Subunits And A
Selective Kinase Inhibitor (Cmpd101)
pdb|3PVW|A Chain A, Bovine Grk2 In Complex With Gbetagamma Subunits And A
Selective Kinase Inhibitor (Cmpd103a)
Length = 695
Score = 48.9 bits (115), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 32/97 (32%), Positives = 50/97 (51%), Gaps = 8/97 (8%)
Query: 71 ASDIVNSLAYLHFGFPRPIVLRNFKTQNILFNEENVAKWFDFLLSISIPEGETHITTDRV 130
A++I+ L ++H F +V R+ K NIL +E + D L+ + + H +
Sbjct: 298 AAEIILGLEHMHNRF---VVYRDLKPANILLDEHGHVRISDLGLACDFSKKKPHAS---- 350
Query: 131 IGTRGYSAPEYISICVLNEKS-NVFSFGAFLFELLAG 166
+GT GY APE + V + S + FS G LF+LL G
Sbjct: 351 VGTHGYMAPEVLQKGVAYDSSADWFSLGCMLFKLLRG 387
>pdb|3OG7|A Chain A, B-Raf Kinase V600e Oncogenic Mutant In Complex With
Plx4032
pdb|3OG7|B Chain B, B-Raf Kinase V600e Oncogenic Mutant In Complex With
Plx4032
Length = 289
Score = 48.9 bits (115), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 30/104 (28%), Positives = 53/104 (50%), Gaps = 6/104 (5%)
Query: 68 LKIASDIVNSLAYLHFGFPRPIVLRNFKTQNILFNEENVAKWFDFLLSISIPEGETHITT 127
+ IA + YLH + I+ R+ K+ NI +E+N K DF L+
Sbjct: 123 IDIARQTARGMDYLH---AKSIIHRDLKSNNIFLHEDNTVKIGDFGLATEKSRWSGSHQF 179
Query: 128 DRVIGTRGYSAPEYISICVLNE---KSNVFSFGAFLFELLAGRI 168
+++ G+ + APE I + N +S+V++FG L+EL+ G++
Sbjct: 180 EQLSGSILWMAPEVIRMQDSNPYSFQSDVYAFGIVLYELMTGQL 223
>pdb|3KRW|A Chain A, Human Grk2 In Complex With Gbetgamma Subunits And Balanol
(Soak)
pdb|3KRX|A Chain A, Human Grk2 In Complex With Gbetgamma Subunits And Balanol
(Co-Crystal)
Length = 688
Score = 48.5 bits (114), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 32/97 (32%), Positives = 50/97 (51%), Gaps = 8/97 (8%)
Query: 71 ASDIVNSLAYLHFGFPRPIVLRNFKTQNILFNEENVAKWFDFLLSISIPEGETHITTDRV 130
A++I+ L ++H F +V R+ K NIL +E + D L+ + + H +
Sbjct: 297 AAEIILGLEHMHNRF---VVYRDLKPANILLDEHGHVRISDLGLACDFSKKKPHAS---- 349
Query: 131 IGTRGYSAPEYISICVLNEKS-NVFSFGAFLFELLAG 166
+GT GY APE + V + S + FS G LF+LL G
Sbjct: 350 VGTHGYMAPEVLQKGVAYDSSADWFSLGCMLFKLLRG 386
>pdb|3CIK|A Chain A, Human Grk2 In Complex With Gbetagamma Subunits
pdb|3V5W|A Chain A, Human G Protein-Coupled Receptor Kinase 2 In Complex With
Soluble Gbetagamma Subunits And Paroxetine
Length = 689
Score = 48.5 bits (114), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 32/97 (32%), Positives = 50/97 (51%), Gaps = 8/97 (8%)
Query: 71 ASDIVNSLAYLHFGFPRPIVLRNFKTQNILFNEENVAKWFDFLLSISIPEGETHITTDRV 130
A++I+ L ++H F +V R+ K NIL +E + D L+ + + H +
Sbjct: 298 AAEIILGLEHMHNRF---VVYRDLKPANILLDEHGHVRISDLGLACDFSKKKPHAS---- 350
Query: 131 IGTRGYSAPEYISICVLNEKS-NVFSFGAFLFELLAG 166
+GT GY APE + V + S + FS G LF+LL G
Sbjct: 351 VGTHGYMAPEVLQKGVAYDSSADWFSLGCMLFKLLRG 387
>pdb|4FK3|A Chain A, B-Raf Kinase V600e Oncogenic Mutant In Complex With
Plx3203
pdb|4FK3|B Chain B, B-Raf Kinase V600e Oncogenic Mutant In Complex With
Plx3203
Length = 292
Score = 48.5 bits (114), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 30/104 (28%), Positives = 53/104 (50%), Gaps = 6/104 (5%)
Query: 68 LKIASDIVNSLAYLHFGFPRPIVLRNFKTQNILFNEENVAKWFDFLLSISIPEGETHITT 127
+ IA + YLH + I+ R+ K+ NI +E+N K DF L+
Sbjct: 123 IDIARQTARGMDYLH---AKSIIHRDLKSNNIFLHEDNTVKIGDFGLATEKSRWSGSHQF 179
Query: 128 DRVIGTRGYSAPEYISICVLNE---KSNVFSFGAFLFELLAGRI 168
+++ G+ + APE I + N +S+V++FG L+EL+ G++
Sbjct: 180 EQLSGSILWMAPEVIRMQDSNPYSFQSDVYAFGIVLYELMTGQL 223
>pdb|3NYN|A Chain A, Crystal Structure Of G Protein-Coupled Receptor Kinase 6
In Complex With Sangivamycin
pdb|3NYN|B Chain B, Crystal Structure Of G Protein-Coupled Receptor Kinase 6
In Complex With Sangivamycin
pdb|3NYO|A Chain A, Crystal Structure Of G Protein-Coupled Receptor Kinase 6
In Complex With Amp
pdb|3NYO|B Chain B, Crystal Structure Of G Protein-Coupled Receptor Kinase 6
In Complex With Amp
Length = 576
Score = 48.5 bits (114), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 30/97 (30%), Positives = 50/97 (51%), Gaps = 6/97 (6%)
Query: 71 ASDIVNSLAYLHFGFPRPIVLRNFKTQNILFNEENVAKWFDFLLSISIPEGETHITTDRV 130
A++I L LH IV R+ K +NIL ++ + D L++ +PEG+ T
Sbjct: 292 AAEICCGLEDLHR---ERIVYRDLKPENILLDDHGHIRISDLGLAVHVPEGQ---TIKGR 345
Query: 131 IGTRGYSAPEYISICVLNEKSNVFSFGAFLFELLAGR 167
+GT GY APE + + ++ G L+E++AG+
Sbjct: 346 VGTVGYMAPEVVKNERYTFSPDWWALGCLLYEMIAGQ 382
>pdb|3PWY|A Chain A, Crystal Structure Of An Extender (Spd28345)-Modified Human
Pdk1 Complex 2
Length = 311
Score = 48.5 bits (114), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 26/95 (27%), Positives = 53/95 (55%), Gaps = 3/95 (3%)
Query: 72 SDIVNSLAYLHFGFPRPIVLRNFKTQNILFNEENVAKWFDFLLSISIPEGETHITTDRVI 131
++IV++L YLH + I+ R+ K +NIL NE+ + DF + + + +
Sbjct: 139 AEIVSALEYLH---GKGIIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANSFV 195
Query: 132 GTRGYSAPEYISICVLNEKSNVFSFGAFLFELLAG 166
GT Y +PE ++ ++ S++++ G +++L+AG
Sbjct: 196 GTAQYVSPELLTEKSASKSSDLWALGCIIYQLVAG 230
>pdb|4GT5|A Chain A, Crystal Structure Of The Inactive Trka Kinase Domain
Length = 306
Score = 48.1 bits (113), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 55/233 (23%), Positives = 91/233 (39%), Gaps = 36/233 (15%)
Query: 26 MSHNHILKRIGCCLQTPIPILVFQSVEYGTLRDCIFG--------------APLPR---- 67
+ H HI++ G C + ++VF+ + +G L + AP P
Sbjct: 77 LQHQHIVRFFGVCTEGRPLLMVFEYMRHGDLNRFLRSHGPDAKLLAGGEDVAPGPLGLGQ 136
Query: 68 -LKIASDIVNSLAYL---HFGFPRPIVLRNFKTQNILFNEENVAKWFDFLLSISIPEGET 123
L +AS + + YL HF V R+ T+N L + V K DF +S I +
Sbjct: 137 LLAVASQVAAGMVYLAGLHF------VHRDLATRNCLVGQGLVVKIGDFGMSRDIYSTDY 190
Query: 124 HITTDRVIGTRGYSAPEYISICVLNEKSNVFSFGAFLFELLAGRIHIWDLLKDTHDHGCF 183
+ R + + PE I +S+V+SFG L+E+ W L +T C
Sbjct: 191 YRVGGRTMLPIRWMPPESILYRKFTTESDVWSFGVVLWEIFTYGKQPWYQLSNTEAIDC- 249
Query: 184 FNEYLKNYLEDKRFTGIPAPIIVQDIPCIEKE-QQLHA--SAQLTLECVNNSP 233
+ E +R P + C ++E QQ H+ L+ + +P
Sbjct: 250 ----ITQGRELERPRACPPEVYAIMRGCWQREPQQRHSIKDVHARLQALAQAP 298
>pdb|4F0I|A Chain A, Crystal Structure Of Apo Trka
pdb|4F0I|B Chain B, Crystal Structure Of Apo Trka
Length = 300
Score = 48.1 bits (113), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 55/233 (23%), Positives = 91/233 (39%), Gaps = 36/233 (15%)
Query: 26 MSHNHILKRIGCCLQTPIPILVFQSVEYGTLRDCIFG--------------APLPR---- 67
+ H HI++ G C + ++VF+ + +G L + AP P
Sbjct: 71 LQHQHIVRFFGVCTEGRPLLMVFEYMRHGDLNRFLRSHGPDAKLLAGGEDVAPGPLGLGQ 130
Query: 68 -LKIASDIVNSLAYL---HFGFPRPIVLRNFKTQNILFNEENVAKWFDFLLSISIPEGET 123
L +AS + + YL HF V R+ T+N L + V K DF +S I +
Sbjct: 131 LLAVASQVAAGMVYLAGLHF------VHRDLATRNCLVGQGLVVKIGDFGMSRDIYSTDY 184
Query: 124 HITTDRVIGTRGYSAPEYISICVLNEKSNVFSFGAFLFELLAGRIHIWDLLKDTHDHGCF 183
+ R + + PE I +S+V+SFG L+E+ W L +T C
Sbjct: 185 YRVGGRTMLPIRWMPPESILYRKFTTESDVWSFGVVLWEIFTYGKQPWYQLSNTEAIDC- 243
Query: 184 FNEYLKNYLEDKRFTGIPAPIIVQDIPCIEKE-QQLHA--SAQLTLECVNNSP 233
+ E +R P + C ++E QQ H+ L+ + +P
Sbjct: 244 ----ITQGRELERPRACPPEVYAIMRGCWQREPQQRHSIKDVHARLQALAQAP 292
>pdb|4AOJ|A Chain A, Human Trka In Complex With The Inhibitor Az-23
pdb|4AOJ|B Chain B, Human Trka In Complex With The Inhibitor Az-23
pdb|4AOJ|C Chain C, Human Trka In Complex With The Inhibitor Az-23
Length = 329
Score = 48.1 bits (113), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 55/233 (23%), Positives = 91/233 (39%), Gaps = 36/233 (15%)
Query: 26 MSHNHILKRIGCCLQTPIPILVFQSVEYGTLRDCIFG--------------APLPR---- 67
+ H HI++ G C + ++VF+ + +G L + AP P
Sbjct: 100 LQHQHIVRFFGVCTEGRPLLMVFEYMRHGDLNRFLRSHGPDAKLLAGGEDVAPGPLGLGQ 159
Query: 68 -LKIASDIVNSLAYL---HFGFPRPIVLRNFKTQNILFNEENVAKWFDFLLSISIPEGET 123
L +AS + + YL HF V R+ T+N L + V K DF +S I +
Sbjct: 160 LLAVASQVAAGMVYLAGLHF------VHRDLATRNCLVGQGLVVKIGDFGMSRDIYSTDY 213
Query: 124 HITTDRVIGTRGYSAPEYISICVLNEKSNVFSFGAFLFELLAGRIHIWDLLKDTHDHGCF 183
+ R + + PE I +S+V+SFG L+E+ W L +T C
Sbjct: 214 YRVGGRTMLPIRWMPPESILYRKFTTESDVWSFGVVLWEIFTYGKQPWYQLSNTEAIDC- 272
Query: 184 FNEYLKNYLEDKRFTGIPAPIIVQDIPCIEKE-QQLHA--SAQLTLECVNNSP 233
+ E +R P + C ++E QQ H+ L+ + +P
Sbjct: 273 ----ITQGRELERPRACPPEVYAIMRGCWQREPQQRHSIKDVHARLQALAQAP 321
>pdb|2ACX|A Chain A, Crystal Structure Of G Protein Coupled Receptor Kinase 6
Bound To Amppnp
pdb|2ACX|B Chain B, Crystal Structure Of G Protein Coupled Receptor Kinase 6
Bound To Amppnp
Length = 576
Score = 48.1 bits (113), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 30/97 (30%), Positives = 50/97 (51%), Gaps = 6/97 (6%)
Query: 71 ASDIVNSLAYLHFGFPRPIVLRNFKTQNILFNEENVAKWFDFLLSISIPEGETHITTDRV 130
A++I L LH IV R+ K +NIL ++ + D L++ +PEG+ T
Sbjct: 292 AAEICCGLEDLHR---ERIVYRDLKPENILLDDHGHIRISDLGLAVHVPEGQ---TIKGR 345
Query: 131 IGTRGYSAPEYISICVLNEKSNVFSFGAFLFELLAGR 167
+GT GY APE + + ++ G L+E++AG+
Sbjct: 346 VGTVGYMAPEVVKNERYTFSPDWWALGCLLYEMIAGQ 382
>pdb|3C4C|A Chain A, B-Raf Kinase In Complex With Plx4720
pdb|3C4C|B Chain B, B-Raf Kinase In Complex With Plx4720
Length = 280
Score = 47.8 bits (112), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 30/104 (28%), Positives = 53/104 (50%), Gaps = 6/104 (5%)
Query: 68 LKIASDIVNSLAYLHFGFPRPIVLRNFKTQNILFNEENVAKWFDFLLSISIPEGETHITT 127
+ IA + YLH + I+ R+ K+ NI +E+N K DF L+
Sbjct: 111 IDIARQTARGMDYLH---AKSIIHRDLKSNNIFLHEDNTVKIGDFGLATVKSRWSGSHQF 167
Query: 128 DRVIGTRGYSAPEYISICVLNE---KSNVFSFGAFLFELLAGRI 168
+++ G+ + APE I + N +S+V++FG L+EL+ G++
Sbjct: 168 EQLSGSILWMAPEVIRMQDSNPYSFQSDVYAFGIVLYELMTGQL 211
>pdb|2XA4|A Chain A, Inhibitors Of Jak2 Kinase Domain
pdb|2XA4|B Chain B, Inhibitors Of Jak2 Kinase Domain
Length = 298
Score = 47.8 bits (112), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 44/158 (27%), Positives = 70/158 (44%), Gaps = 19/158 (12%)
Query: 20 ITYAAQMSHNHILKRIGCCLQTPIP--ILVFQSVEYGTLRDCIFGAP-----LPRLKIAS 72
I + H++I+K G C L+ + + YG+LRD + + L+ S
Sbjct: 65 IEILKSLQHDNIVKYKGVCYSAGRRNLKLIMEYLPYGSLRDYLQAHAERIDHIKLLQYTS 124
Query: 73 DIVNSLAYLHFGFPRPIVLRNFKTQNILFNEENVAKWFDFLLSISIPEGETHITTDRVIG 132
I + YL G R + R+ T+NIL EN K DF L+ +P+ + +
Sbjct: 125 QICKGMEYL--GTKR-YIHRDLATRNILVENENRVKIGDFGLTKVLPQDKEXXK----VK 177
Query: 133 TRGYS-----APEYISICVLNEKSNVFSFGAFLFELLA 165
G S APE ++ + S+V+SFG L+EL
Sbjct: 178 EPGESPIFWYAPESLTESKFSVASDVWSFGVVLYELFT 215
>pdb|3GVU|A Chain A, The Crystal Structure Of Human Abl2 In Complex With
Gleevec
pdb|3HMI|A Chain A, The Crystal Structure Of Human Abl2 In Complex With
5-Amino-3-{[4-
(Aminosulfonyl)phenyl]amino}-N-(2,
6-Difluorophenyl)-1h-1,2,4- Triazole-1-Carbothioamide
pdb|2XYN|A Chain A, Human Abl2 In Complex With Aurora Kinase Inhibitor Vx-680
pdb|2XYN|B Chain B, Human Abl2 In Complex With Aurora Kinase Inhibitor Vx-680
pdb|2XYN|C Chain C, Human Abl2 In Complex With Aurora Kinase Inhibitor Vx-680
Length = 292
Score = 47.8 bits (112), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 36/145 (24%), Positives = 71/145 (48%), Gaps = 10/145 (6%)
Query: 25 QMSHNHILKRIGCCLQTPIPILVFQSVEYGTLRDCIFG------APLPRLKIASDIVNSL 78
++ H ++++ +G C P +V + + YG L D + + L +A+ I +++
Sbjct: 84 EIKHPNLVQLLGVCTLEPPFYIVTEYMPYGNLLDYLRECNREEVTAVVLLYMATQISSAM 143
Query: 79 AYLHFGFPRPIVLRNFKTQNILFNEENVAKWFDFLLSISIPEGETHITTDRVIGTRGYSA 138
YL + + R+ +N L E +V K DF LS + G+T+ ++A
Sbjct: 144 EYLE---KKNFIHRDLAARNCLVGENHVVKVADFGLS-RLMTGDTYTAHAGAKFPIKWTA 199
Query: 139 PEYISICVLNEKSNVFSFGAFLFEL 163
PE ++ + KS+V++FG L+E+
Sbjct: 200 PESLAYNTFSIKSDVWAFGVLLWEI 224
>pdb|3QC9|A Chain A, Crystal Structure Of Cross-Linked Bovine Grk1 T8cN480C
DOUBLE MUTANT Complexed With Adp And Mg
pdb|3QC9|B Chain B, Crystal Structure Of Cross-Linked Bovine Grk1 T8cN480C
DOUBLE MUTANT Complexed With Adp And Mg
pdb|3QC9|C Chain C, Crystal Structure Of Cross-Linked Bovine Grk1 T8cN480C
DOUBLE MUTANT Complexed With Adp And Mg
pdb|3QC9|D Chain D, Crystal Structure Of Cross-Linked Bovine Grk1 T8cN480C
DOUBLE MUTANT Complexed With Adp And Mg
Length = 543
Score = 47.8 bits (112), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 28/96 (29%), Positives = 51/96 (53%), Gaps = 5/96 (5%)
Query: 72 SDIVNSLAYLHFGFPRPIVLRNFKTQNILFNEENVAKWFDFLLSISIPEGETHITTDRVI 131
+ IV+ L +LH R I+ R+ K +N+L +++ + D L++ + G+T T
Sbjct: 296 AQIVSGLEHLH---QRNIIYRDLKPENVLLDDDGNVRISDLGLAVELKAGQTK--TKGYA 350
Query: 132 GTRGYSAPEYISICVLNEKSNVFSFGAFLFELLAGR 167
GT G+ APE + + + F+ G L+E++A R
Sbjct: 351 GTPGFMAPELLLGEEYDFSVDYFALGVTLYEMIAAR 386
>pdb|3C4X|A Chain A, Crystal Structure Of G Protein Coupled Receptor Kinase 1
Bound To Atp And Magnesium Chloride At 2.9a
pdb|3C4X|B Chain B, Crystal Structure Of G Protein Coupled Receptor Kinase 1
Bound To Atp And Magnesium Chloride At 2.9a
pdb|3C4Y|A Chain A, Crystal Structure Of Apo Form Of G Protein Coupled
Receptor Kinase 1 At 7.51a
pdb|3C4Y|B Chain B, Crystal Structure Of Apo Form Of G Protein Coupled
Receptor Kinase 1 At 7.51a
pdb|3C4Z|A Chain A, Crystal Structure Of G Protein Coupled Receptor Kinase 1
Bound To Adp And Magnesium Chloride At 1.84a
pdb|3C50|A Chain A, Crystal Structure Of G Protein Coupled Receptor Kinase 1
Bound To Adp And Magnesium Chloride At 2.6a
pdb|3C50|B Chain B, Crystal Structure Of G Protein Coupled Receptor Kinase 1
Bound To Adp And Magnesium Chloride At 2.6a
pdb|3C51|A Chain A, Crystal Structure Of G Protein Coupled Receptor Kinase 1
Bound To Adp And Magnesium Chloride At 3.55a
pdb|3C51|B Chain B, Crystal Structure Of G Protein Coupled Receptor Kinase 1
Bound To Adp And Magnesium Chloride At 3.55a
Length = 543
Score = 47.8 bits (112), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 28/96 (29%), Positives = 51/96 (53%), Gaps = 5/96 (5%)
Query: 72 SDIVNSLAYLHFGFPRPIVLRNFKTQNILFNEENVAKWFDFLLSISIPEGETHITTDRVI 131
+ IV+ L +LH R I+ R+ K +N+L +++ + D L++ + G+T T
Sbjct: 296 AQIVSGLEHLH---QRNIIYRDLKPENVLLDDDGNVRISDLGLAVELKAGQTK--TKGYA 350
Query: 132 GTRGYSAPEYISICVLNEKSNVFSFGAFLFELLAGR 167
GT G+ APE + + + F+ G L+E++A R
Sbjct: 351 GTPGFMAPELLLGEEYDFSVDYFALGVTLYEMIAAR 386
>pdb|1OPK|A Chain A, Structural Basis For The Auto-Inhibition Of C-Abl Tyrosine
Kinase
Length = 495
Score = 47.8 bits (112), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 35/145 (24%), Positives = 73/145 (50%), Gaps = 10/145 (6%)
Query: 25 QMSHNHILKRIGCCLQTPIPILVFQSVEYGTLRDCIFG------APLPRLKIASDIVNSL 78
++ H ++++ +G C + P ++ + + YG L D + + + L +A+ I +++
Sbjct: 272 EIKHPNLVQLLGVCTREPPFYIITEFMTYGNLLDYLRECNRQEVSAVVLLYMATQISSAM 331
Query: 79 AYLHFGFPRPIVLRNFKTQNILFNEENVAKWFDFLLSISIPEGETHITTDRVIGTRGYSA 138
YL + + RN +N L E ++ K DF LS + G+T+ ++A
Sbjct: 332 EYLE---KKNFIHRNLAARNCLVGENHLVKVADFGLS-RLMTGDTYTAHAGAKFPIKWTA 387
Query: 139 PEYISICVLNEKSNVFSFGAFLFEL 163
PE ++ + KS+V++FG L+E+
Sbjct: 388 PESLAYNKFSIKSDVWAFGVLLWEI 412
>pdb|3T8O|A Chain A, Rhodopsin Kinase (grk1) L166k Mutant At 2.5a Resolution
Length = 543
Score = 47.8 bits (112), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 28/96 (29%), Positives = 51/96 (53%), Gaps = 5/96 (5%)
Query: 72 SDIVNSLAYLHFGFPRPIVLRNFKTQNILFNEENVAKWFDFLLSISIPEGETHITTDRVI 131
+ IV+ L +LH R I+ R+ K +N+L +++ + D L++ + G+T T
Sbjct: 296 AQIVSGLEHLH---QRNIIYRDLKPENVLLDDDGNVRISDLGLAVELKAGQTK--TKGYA 350
Query: 132 GTRGYSAPEYISICVLNEKSNVFSFGAFLFELLAGR 167
GT G+ APE + + + F+ G L+E++A R
Sbjct: 351 GTPGFMAPELLLGEEYDFSVDYFALGVTLYEMIAAR 386
>pdb|3C4W|A Chain A, Crystal Structure Of G Protein Coupled Receptor Kinase 1
Bound To Atp And Magnesium Chloride At 2.7a
pdb|3C4W|B Chain B, Crystal Structure Of G Protein Coupled Receptor Kinase 1
Bound To Atp And Magnesium Chloride At 2.7a
Length = 543
Score = 47.8 bits (112), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 28/96 (29%), Positives = 51/96 (53%), Gaps = 5/96 (5%)
Query: 72 SDIVNSLAYLHFGFPRPIVLRNFKTQNILFNEENVAKWFDFLLSISIPEGETHITTDRVI 131
+ IV+ L +LH R I+ R+ K +N+L +++ + D L++ + G+T T
Sbjct: 296 AQIVSGLEHLH---QRNIIYRDLKPENVLLDDDGNVRISDLGLAVELKAGQTK--TKGYA 350
Query: 132 GTRGYSAPEYISICVLNEKSNVFSFGAFLFELLAGR 167
GT G+ APE + + + F+ G L+E++A R
Sbjct: 351 GTPGFMAPELLLGEEYDFSVDYFALGVTLYEMIAAR 386
>pdb|1K9A|A Chain A, Crystal Structure Analysis Of Full-Length
Carboxyl-Terminal Src Kinase At 2.5 A Resolution
pdb|1K9A|B Chain B, Crystal Structure Analysis Of Full-Length
Carboxyl-Terminal Src Kinase At 2.5 A Resolution
pdb|1K9A|C Chain C, Crystal Structure Analysis Of Full-Length
Carboxyl-Terminal Src Kinase At 2.5 A Resolution
pdb|1K9A|D Chain D, Crystal Structure Analysis Of Full-Length
Carboxyl-Terminal Src Kinase At 2.5 A Resolution
pdb|1K9A|E Chain E, Crystal Structure Analysis Of Full-Length
Carboxyl-Terminal Src Kinase At 2.5 A Resolution
pdb|1K9A|F Chain F, Crystal Structure Analysis Of Full-Length
Carboxyl-Terminal Src Kinase At 2.5 A Resolution
Length = 450
Score = 47.4 bits (111), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 41/153 (26%), Positives = 76/153 (49%), Gaps = 18/153 (11%)
Query: 25 QMSHNHILKRIGCCLQTPIPI-LVFQSVEYGTLRD-------CIFGAPLPRLKIASDIVN 76
Q+ H+++++ +G ++ + +V + + G+L D + G LK + D+
Sbjct: 242 QLRHSNLVQLLGVIVEEKGGLYIVTEYMAKGSLVDYLRSRGRSVLGGDC-LLKFSLDVCE 300
Query: 77 SLAYLHFGFPRPIVLRNFKTQNILFNEENVAKWFDFLLSISIPEGETHITTDRVIGTRGY 136
++ YL V R+ +N+L +E+NVAK DF L+ E T D +
Sbjct: 301 AMEYLE---GNNFVHRDLAARNVLVSEDNVAKVSDFGLT-----KEASSTQDTGKLPVKW 352
Query: 137 SAPEYISICVLNEKSNVFSFGAFLFELLA-GRI 168
+APE + + KS+V+SFG L+E+ + GR+
Sbjct: 353 TAPEALREKKFSTKSDVWSFGILLWEIYSFGRV 385
>pdb|2B7A|A Chain A, The Structural Basis Of Janus Kinase 2 Inhibition By A
Potent And Specific Pan-Janus Kinase Inhibitor
pdb|2B7A|B Chain B, The Structural Basis Of Janus Kinase 2 Inhibition By A
Potent And Specific Pan-Janus Kinase Inhibitor
pdb|3FUP|A Chain A, Crystal Structures Of Jak1 And Jak2 Inhibitor Complexes
pdb|3FUP|B Chain B, Crystal Structures Of Jak1 And Jak2 Inhibitor Complexes
Length = 293
Score = 47.4 bits (111), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 44/158 (27%), Positives = 70/158 (44%), Gaps = 19/158 (12%)
Query: 20 ITYAAQMSHNHILKRIGCCLQTPIP--ILVFQSVEYGTLRDCIFGAP-----LPRLKIAS 72
I + H++I+K G C L+ + + YG+LRD + + L+ S
Sbjct: 60 IEILKSLQHDNIVKYKGVCYSAGRRNLKLIMEYLPYGSLRDYLQKHKERIDHIKLLQYTS 119
Query: 73 DIVNSLAYLHFGFPRPIVLRNFKTQNILFNEENVAKWFDFLLSISIPEGETHITTDRVIG 132
I + YL G R + R+ T+NIL EN K DF L+ +P+ + +
Sbjct: 120 QICKGMEYL--GTKR-YIHRDLATRNILVENENRVKIGDFGLTKVLPQDKEXXK----VK 172
Query: 133 TRGYS-----APEYISICVLNEKSNVFSFGAFLFELLA 165
G S APE ++ + S+V+SFG L+EL
Sbjct: 173 EPGESPIFWYAPESLTESKFSVASDVWSFGVVLYELFT 210
>pdb|3E62|A Chain A, Fragment Based Discovery Of Jak-2 Inhibitors
pdb|3E63|A Chain A, Fragment Based Discovery Of Jak-2 Inhibitors
pdb|3E64|A Chain A, Fragment Based Discovery Of Jak-2 Inhibitors
Length = 293
Score = 47.4 bits (111), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 44/158 (27%), Positives = 70/158 (44%), Gaps = 19/158 (12%)
Query: 20 ITYAAQMSHNHILKRIGCCLQTPIP--ILVFQSVEYGTLRDCIFGAP-----LPRLKIAS 72
I + H++I+K G C L+ + + YG+LRD + + L+ S
Sbjct: 61 IEILKSLQHDNIVKYKGVCYSAGRRNLKLIMEYLPYGSLRDYLQKHKERIDHIKLLQYTS 120
Query: 73 DIVNSLAYLHFGFPRPIVLRNFKTQNILFNEENVAKWFDFLLSISIPEGETHITTDRVIG 132
I + YL G R + R+ T+NIL EN K DF L+ +P+ + +
Sbjct: 121 QICKGMEYL--GTKR-YIHRDLATRNILVENENRVKIGDFGLTKVLPQDKEXXK----VK 173
Query: 133 TRGYS-----APEYISICVLNEKSNVFSFGAFLFELLA 165
G S APE ++ + S+V+SFG L+EL
Sbjct: 174 EPGESPIFWYAPESLTESKFSVASDVWSFGVVLYELFT 211
>pdb|3TJC|A Chain A, Co-Crystal Structure Of Jak2 With Thienopyridine 8
pdb|3TJC|B Chain B, Co-Crystal Structure Of Jak2 With Thienopyridine 8
pdb|3TJD|A Chain A, Co-Crystal Structure Of Jak2 With Thienopyridine 19
pdb|3TJD|B Chain B, Co-Crystal Structure Of Jak2 With Thienopyridine 19
Length = 298
Score = 47.4 bits (111), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 44/158 (27%), Positives = 70/158 (44%), Gaps = 19/158 (12%)
Query: 20 ITYAAQMSHNHILKRIGCCLQTPIP--ILVFQSVEYGTLRDCIFGAP-----LPRLKIAS 72
I + H++I+K G C L+ + + YG+LRD + + L+ S
Sbjct: 65 IEILKSLQHDNIVKYKGVCYSAGRRNLKLIMEYLPYGSLRDYLQKHKERIDHIKLLQYTS 124
Query: 73 DIVNSLAYLHFGFPRPIVLRNFKTQNILFNEENVAKWFDFLLSISIPEGETHITTDRVIG 132
I + YL G R + R+ T+NIL EN K DF L+ +P+ + +
Sbjct: 125 QICKGMEYL--GTKR-YIHRDLATRNILVENENRVKIGDFGLTKVLPQDKEXXK----VK 177
Query: 133 TRGYS-----APEYISICVLNEKSNVFSFGAFLFELLA 165
G S APE ++ + S+V+SFG L+EL
Sbjct: 178 EPGESPIFWYAPESLTESKFSVASDVWSFGVVLYELFT 215
>pdb|4A07|A Chain A, Human Pdk1 Kinase Domain In Complex With Allosteric
Activator Ps171 Bound To The Pif-Pocket
pdb|4AW0|A Chain A, Human Pdk1 Kinase Domain In Complex With Allosteric
Compound Ps182 Bound To The Pif-Pocket
Length = 311
Score = 47.4 bits (111), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 26/95 (27%), Positives = 52/95 (54%), Gaps = 3/95 (3%)
Query: 72 SDIVNSLAYLHFGFPRPIVLRNFKTQNILFNEENVAKWFDFLLSISIPEGETHITTDRVI 131
++IV++L YLH + I+ R+ K +NIL NE+ + DF + + + +
Sbjct: 139 AEIVSALEYLH---GKGIIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANXFV 195
Query: 132 GTRGYSAPEYISICVLNEKSNVFSFGAFLFELLAG 166
GT Y +PE ++ + S++++ G +++L+AG
Sbjct: 196 GTAQYVSPELLTEKSAXKSSDLWALGCIIYQLVAG 230
>pdb|3Q32|A Chain A, Structure Of Janus Kinase 2 With A Pyrrolotriazine
Inhibitor
pdb|3Q32|B Chain B, Structure Of Janus Kinase 2 With A Pyrrolotriazine
Inhibitor
Length = 301
Score = 47.4 bits (111), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 44/158 (27%), Positives = 70/158 (44%), Gaps = 19/158 (12%)
Query: 20 ITYAAQMSHNHILKRIGCCLQTPIP--ILVFQSVEYGTLRDCIFGAP-----LPRLKIAS 72
I + H++I+K G C L+ + + YG+LRD + + L+ S
Sbjct: 62 IEILKSLQHDNIVKYKGVCYSAGRRNLKLIMEYLPYGSLRDYLQKHKERIDHIKLLQYTS 121
Query: 73 DIVNSLAYLHFGFPRPIVLRNFKTQNILFNEENVAKWFDFLLSISIPEGETHITTDRVIG 132
I + YL G R + R+ T+NIL EN K DF L+ +P+ + +
Sbjct: 122 QICKGMEYL--GTKR-YIHRDLATRNILVENENRVKIGDFGLTKVLPQDKEXXK----VK 174
Query: 133 TRGYS-----APEYISICVLNEKSNVFSFGAFLFELLA 165
G S APE ++ + S+V+SFG L+EL
Sbjct: 175 EPGESPIFWYAPESLTESKFSVASDVWSFGVVLYELFT 212
>pdb|1BYG|A Chain A, Kinase Domain Of Human C-Terminal Src Kinase (Csk) In
Complex With Inhibitor Staurosporine
Length = 278
Score = 47.4 bits (111), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 41/153 (26%), Positives = 76/153 (49%), Gaps = 18/153 (11%)
Query: 25 QMSHNHILKRIGCCLQTPIPI-LVFQSVEYGTLRD-------CIFGAPLPRLKIASDIVN 76
Q+ H+++++ +G ++ + +V + + G+L D + G LK + D+
Sbjct: 70 QLRHSNLVQLLGVIVEEKGGLYIVTEYMAKGSLVDYLRSRGRSVLGGDC-LLKFSLDVCE 128
Query: 77 SLAYLHFGFPRPIVLRNFKTQNILFNEENVAKWFDFLLSISIPEGETHITTDRVIGTRGY 136
++ YL V R+ +N+L +E+NVAK DF L+ E T D +
Sbjct: 129 AMEYLE---GNNFVHRDLAARNVLVSEDNVAKVSDFGLT-----KEASSTQDTGKLPVKW 180
Query: 137 SAPEYISICVLNEKSNVFSFGAFLFELLA-GRI 168
+APE + + KS+V+SFG L+E+ + GR+
Sbjct: 181 TAPEALREKKFSTKSDVWSFGILLWEIYSFGRV 213
>pdb|4HGE|A Chain A, Jak2 Kinase (Jh1 Domain) In Complex With Compound 8
pdb|4HGE|B Chain B, Jak2 Kinase (Jh1 Domain) In Complex With Compound 8
Length = 300
Score = 47.4 bits (111), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 44/158 (27%), Positives = 70/158 (44%), Gaps = 19/158 (12%)
Query: 20 ITYAAQMSHNHILKRIGCCLQTPIP--ILVFQSVEYGTLRDCIFGAP-----LPRLKIAS 72
I + H++I+K G C L+ + + YG+LRD + + L+ S
Sbjct: 67 IEILKSLQHDNIVKYKGVCYSAGRRNLKLIMEYLPYGSLRDYLQKHKERIDHIKLLQYTS 126
Query: 73 DIVNSLAYLHFGFPRPIVLRNFKTQNILFNEENVAKWFDFLLSISIPEGETHITTDRVIG 132
I + YL G R + R+ T+NIL EN K DF L+ +P+ + +
Sbjct: 127 QICKGMEYL--GTKR-YIHRDLATRNILVENENRVKIGDFGLTKVLPQDKEXXK----VK 179
Query: 133 TRGYS-----APEYISICVLNEKSNVFSFGAFLFELLA 165
G S APE ++ + S+V+SFG L+EL
Sbjct: 180 EPGESPIFWYAPESLTESKFSVASDVWSFGVVLYELFT 217
>pdb|3MPM|A Chain A, Lck Complexed With A Pyrazolopyrimidine
Length = 267
Score = 47.4 bits (111), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 54/225 (24%), Positives = 91/225 (40%), Gaps = 43/225 (19%)
Query: 25 QMSHNHILKRIGCCLQTPIPILVFQSVEYGTLRDCIFGAPLPRLKI------ASDIVNSL 78
Q+ H +++ Q PI I+ + +E G+L D + +L I A+ I +
Sbjct: 60 QLQHQRLVRLYAVVTQEPIYIIT-EYMENGSLVDFLKTPSGIKLTINKLLDMAAQIAEGM 118
Query: 79 AYLHFGFPRPIVLRNFKTQNILFNEENVAKWFDFLLSISIPEGETHITTDRVIGTRGYSA 138
A++ R + RN + NIL ++ K DF L+ I + E + + ++A
Sbjct: 119 AFIE---ERNYIHRNLRAANILVSDTLSCKIADFGLARLIEDNE-YTAREGAKFPIKWTA 174
Query: 139 PEYISICVLNEKSNVFSFGAFLFELLA-GRIHIWDLLKDTHDHGCFFNEYLKNYLEDKRF 197
PE I+ KS+V+SFG L E++ GRI +
Sbjct: 175 PEAINYGTFTIKSDVWSFGILLTEIVTHGRIP---------------------------Y 207
Query: 198 TGIPAPIIVQDIP----CIEKEQQLHASAQLTLECVNNSPEDRPT 238
G+ P ++Q++ + + QL C PEDRPT
Sbjct: 208 PGMTNPEVIQNLERGYRMVRPDNCPEELYQLMRLCWKERPEDRPT 252
>pdb|2Z60|A Chain A, Crystal Structure Of The T315i Mutant Of Abl Kinase Bound
With Ppy-A
pdb|3IK3|A Chain A, Ap24534, A Pan-Bcr-Abl Inhibitor For Chronic Myeloid
Leukemi Potently Inhibits The T315i Mutant And Overcomes
Mutation-B Resistance
pdb|3IK3|B Chain B, Ap24534, A Pan-Bcr-Abl Inhibitor For Chronic Myeloid
Leukemi Potently Inhibits The T315i Mutant And Overcomes
Mutation-B Resistance
Length = 288
Score = 47.4 bits (111), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 34/145 (23%), Positives = 73/145 (50%), Gaps = 10/145 (6%)
Query: 25 QMSHNHILKRIGCCLQTPIPILVFQSVEYGTLRDCIFG------APLPRLKIASDIVNSL 78
++ H ++++ +G C + P ++ + + YG L D + + + L +A+ I +++
Sbjct: 65 EIKHPNLVQLLGVCTREPPFYIIIEFMTYGNLLDYLRECNRQEVSAVVLLYMATQISSAM 124
Query: 79 AYLHFGFPRPIVLRNFKTQNILFNEENVAKWFDFLLSISIPEGETHITTDRVIGTRGYSA 138
YL + + R+ +N L E ++ K DF LS + G+T+ ++A
Sbjct: 125 EYLE---KKNFIHRDLAARNCLVGENHLVKVADFGLS-RLMTGDTYTAHAGAKFPIKWTA 180
Query: 139 PEYISICVLNEKSNVFSFGAFLFEL 163
PE ++ + KS+V++FG L+E+
Sbjct: 181 PESLAYNKFSIKSDVWAFGVLLWEI 205
>pdb|4E4M|A Chain A, Jak2 Kinase (Jh1 Domain) In Complex With Compound 30
pdb|4E4M|B Chain B, Jak2 Kinase (Jh1 Domain) In Complex With Compound 30
pdb|4E4M|D Chain D, Jak2 Kinase (Jh1 Domain) In Complex With Compound 30
pdb|4E4M|E Chain E, Jak2 Kinase (Jh1 Domain) In Complex With Compound 30
pdb|4F08|A Chain A, Discovery And Optimization Of C-2 Methyl
Imidazo-Pyrrolopyridines As Potent And Orally
Bioavailable Jak1 Inhibitors With Selectivity Over Jak2
pdb|4F08|B Chain B, Discovery And Optimization Of C-2 Methyl
Imidazo-Pyrrolopyridines As Potent And Orally
Bioavailable Jak1 Inhibitors With Selectivity Over Jak2
pdb|4F09|A Chain A, Discovery And Optimization Of C-2 Methyl
Imidazo-Pyrrolopyridines As Potent And Orally
Bioavailable Jak1 Inhibitors With Selectivity Over Jak2
Length = 302
Score = 47.4 bits (111), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 44/158 (27%), Positives = 70/158 (44%), Gaps = 19/158 (12%)
Query: 20 ITYAAQMSHNHILKRIGCCLQTPIP--ILVFQSVEYGTLRDCIFGAP-----LPRLKIAS 72
I + H++I+K G C L+ + + YG+LRD + + L+ S
Sbjct: 69 IEILKSLQHDNIVKYKGVCYSAGRRNLKLIMEYLPYGSLRDYLQKHKERIDHIKLLQYTS 128
Query: 73 DIVNSLAYLHFGFPRPIVLRNFKTQNILFNEENVAKWFDFLLSISIPEGETHITTDRVIG 132
I + YL G R + R+ T+NIL EN K DF L+ +P+ + +
Sbjct: 129 QICKGMEYL--GTKR-YIHRDLATRNILVENENRVKIGDFGLTKVLPQDKEXXK----VK 181
Query: 133 TRGYS-----APEYISICVLNEKSNVFSFGAFLFELLA 165
G S APE ++ + S+V+SFG L+EL
Sbjct: 182 EPGESPIFWYAPESLTESKFSVASDVWSFGVVLYELFT 219
>pdb|3OY3|A Chain A, Crystal Structure Of Abl T315i Mutant Kinase Domain Bound
With A Dfg- Out Inhibitor Ap24589
pdb|3OY3|B Chain B, Crystal Structure Of Abl T315i Mutant Kinase Domain Bound
With A Dfg- Out Inhibitor Ap24589
Length = 284
Score = 47.4 bits (111), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 34/145 (23%), Positives = 73/145 (50%), Gaps = 10/145 (6%)
Query: 25 QMSHNHILKRIGCCLQTPIPILVFQSVEYGTLRDCIFG------APLPRLKIASDIVNSL 78
++ H ++++ +G C + P ++ + + YG L D + + + L +A+ I +++
Sbjct: 65 EIKHPNLVQLLGVCTREPPFYIIIEFMTYGNLLDYLRECNRQEVSAVVLLYMATQISSAM 124
Query: 79 AYLHFGFPRPIVLRNFKTQNILFNEENVAKWFDFLLSISIPEGETHITTDRVIGTRGYSA 138
YL + + R+ +N L E ++ K DF LS + G+T+ ++A
Sbjct: 125 EYLE---KKNFIHRDLAARNCLVGENHLVKVADFGLS-RLMTGDTYTAHAGAKFPIKWTA 180
Query: 139 PEYISICVLNEKSNVFSFGAFLFEL 163
PE ++ + KS+V++FG L+E+
Sbjct: 181 PESLAYNKFSIKSDVWAFGVLLWEI 205
>pdb|4AQC|A Chain A, Triazolopyridine-Based Inhibitor Of Janus Kinase 2
pdb|4AQC|B Chain B, Triazolopyridine-Based Inhibitor Of Janus Kinase 2
Length = 301
Score = 47.4 bits (111), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 44/158 (27%), Positives = 70/158 (44%), Gaps = 19/158 (12%)
Query: 20 ITYAAQMSHNHILKRIGCCLQTPIP--ILVFQSVEYGTLRDCIFGAP-----LPRLKIAS 72
I + H++I+K G C L+ + + YG+LRD + + L+ S
Sbjct: 68 IEILKSLQHDNIVKYKGVCYSAGRRNLKLIMEYLPYGSLRDYLQKHKERIDHIKLLQYTS 127
Query: 73 DIVNSLAYLHFGFPRPIVLRNFKTQNILFNEENVAKWFDFLLSISIPEGETHITTDRVIG 132
I + YL G R + R+ T+NIL EN K DF L+ +P+ + +
Sbjct: 128 QICKGMEYL--GTKR-YIHRDLATRNILVENENRVKIGDFGLTKVLPQDKEXXK----VK 180
Query: 133 TRGYS-----APEYISICVLNEKSNVFSFGAFLFELLA 165
G S APE ++ + S+V+SFG L+EL
Sbjct: 181 EPGESPIFWYAPESLTESKFSVASDVWSFGVVLYELFT 218
>pdb|3RVG|A Chain A, Crystals Structure Of Jak2 With A
1-Amino-5h-Pyrido[4,3-B]indol-4- Carboxamide Inhibitor
Length = 303
Score = 47.4 bits (111), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 44/158 (27%), Positives = 70/158 (44%), Gaps = 19/158 (12%)
Query: 20 ITYAAQMSHNHILKRIGCCLQTPIP--ILVFQSVEYGTLRDCIFGAP-----LPRLKIAS 72
I + H++I+K G C L+ + + YG+LRD + + L+ S
Sbjct: 66 IEILKSLQHDNIVKYKGVCYSAGRRNLKLIMEYLPYGSLRDYLQKHKERIDHIKLLQYTS 125
Query: 73 DIVNSLAYLHFGFPRPIVLRNFKTQNILFNEENVAKWFDFLLSISIPEGETHITTDRVIG 132
I + YL G R + R+ T+NIL EN K DF L+ +P+ + +
Sbjct: 126 QICKGMEYL--GTKR-YIHRDLATRNILVENENRVKIGDFGLTKVLPQDKEXXK----VK 178
Query: 133 TRGYS-----APEYISICVLNEKSNVFSFGAFLFELLA 165
G S APE ++ + S+V+SFG L+EL
Sbjct: 179 EPGESPIFWYAPESLTESKFSVASDVWSFGVVLYELFT 216
>pdb|3JY9|A Chain A, Janus Kinase 2 Inhibitors
Length = 311
Score = 47.4 bits (111), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 44/158 (27%), Positives = 70/158 (44%), Gaps = 19/158 (12%)
Query: 20 ITYAAQMSHNHILKRIGCCLQTPIP--ILVFQSVEYGTLRDCIFGAP-----LPRLKIAS 72
I + H++I+K G C L+ + + YG+LRD + + L+ S
Sbjct: 80 IEILKSLQHDNIVKYKGVCYSAGRRNLKLIMEYLPYGSLRDYLQKHKERIDHIKLLQYTS 139
Query: 73 DIVNSLAYLHFGFPRPIVLRNFKTQNILFNEENVAKWFDFLLSISIPEGETHITTDRVIG 132
I + YL G R + R+ T+NIL EN K DF L+ +P+ + +
Sbjct: 140 QICKGMEYL--GTKR-YIHRDLATRNILVENENRVKIGDFGLTKVLPQDKEXXK----VK 192
Query: 133 TRGYS-----APEYISICVLNEKSNVFSFGAFLFELLA 165
G S APE ++ + S+V+SFG L+EL
Sbjct: 193 EPGESPIFWYAPESLTESKFSVASDVWSFGVVLYELFT 230
>pdb|3LPB|A Chain A, Crystal Structure Of Jak2 Complexed With A Potent
2,8-Diaryl Quinoxaline Inhibitor
pdb|3LPB|B Chain B, Crystal Structure Of Jak2 Complexed With A Potent
2,8-Diaryl Quinoxaline Inhibitor
pdb|3KRR|A Chain A, Crystal Structure Of Jak2 Complexed With A Potent
Quinoxaline Atp Site Inhibitor
Length = 295
Score = 47.4 bits (111), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 44/158 (27%), Positives = 70/158 (44%), Gaps = 19/158 (12%)
Query: 20 ITYAAQMSHNHILKRIGCCLQTPIP--ILVFQSVEYGTLRDCIFGAP-----LPRLKIAS 72
I + H++I+K G C L+ + + YG+LRD + + L+ S
Sbjct: 62 IEILKSLQHDNIVKYKGVCYSAGRRNLKLIMEYLPYGSLRDYLQKHKERIDHIKLLQYTS 121
Query: 73 DIVNSLAYLHFGFPRPIVLRNFKTQNILFNEENVAKWFDFLLSISIPEGETHITTDRVIG 132
I + YL G R + R+ T+NIL EN K DF L+ +P+ + +
Sbjct: 122 QICKGMEYL--GTKR-YIHRDLATRNILVENENRVKIGDFGLTKVLPQDKEXXK----VK 174
Query: 133 TRGYS-----APEYISICVLNEKSNVFSFGAFLFELLA 165
G S APE ++ + S+V+SFG L+EL
Sbjct: 175 EPGESPIFWYAPESLTESKFSVASDVWSFGVVLYELFT 212
>pdb|3D7U|A Chain A, Structural Basis For The Recognition Of C-Src By Its
Inactivator Csk
pdb|3D7U|C Chain C, Structural Basis For The Recognition Of C-Src By Its
Inactivator Csk
Length = 263
Score = 47.4 bits (111), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 41/153 (26%), Positives = 76/153 (49%), Gaps = 18/153 (11%)
Query: 25 QMSHNHILKRIGCCLQTPIPI-LVFQSVEYGTLRD-------CIFGAPLPRLKIASDIVN 76
Q+ H+++++ +G ++ + +V + + G+L D + G LK + D+
Sbjct: 55 QLRHSNLVQLLGVIVEEKGGLYIVTEYMAKGSLVDYLRSRGRSVLGGDC-LLKFSLDVCE 113
Query: 77 SLAYLHFGFPRPIVLRNFKTQNILFNEENVAKWFDFLLSISIPEGETHITTDRVIGTRGY 136
++ YL V R+ +N+L +E+NVAK DF L+ E T D +
Sbjct: 114 AMEYLE---GNNFVHRDLAARNVLVSEDNVAKVSDFGLT-----KEASSTQDTGKLPVKW 165
Query: 137 SAPEYISICVLNEKSNVFSFGAFLFELLA-GRI 168
+APE + + KS+V+SFG L+E+ + GR+
Sbjct: 166 TAPEALREKKFSTKSDVWSFGILLWEIYSFGRV 198
>pdb|2W1I|A Chain A, Structure Determination Of Aurora Kinase In Complex With
Inhibitor
pdb|2W1I|B Chain B, Structure Determination Of Aurora Kinase In Complex With
Inhibitor
Length = 326
Score = 47.4 bits (111), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 44/158 (27%), Positives = 70/158 (44%), Gaps = 19/158 (12%)
Query: 20 ITYAAQMSHNHILKRIGCCLQTPIP--ILVFQSVEYGTLRDCIFGAP-----LPRLKIAS 72
I + H++I+K G C L+ + + YG+LRD + + L+ S
Sbjct: 93 IEILKSLQHDNIVKYKGVCYSAGRRNLKLIMEYLPYGSLRDYLQKHKERIDHIKLLQYTS 152
Query: 73 DIVNSLAYLHFGFPRPIVLRNFKTQNILFNEENVAKWFDFLLSISIPEGETHITTDRVIG 132
I + YL G R + R+ T+NIL EN K DF L+ +P+ + +
Sbjct: 153 QICKGMEYL--GTKR-YIHRDLATRNILVENENRVKIGDFGLTKVLPQDKEXXK----VK 205
Query: 133 TRGYS-----APEYISICVLNEKSNVFSFGAFLFELLA 165
G S APE ++ + S+V+SFG L+EL
Sbjct: 206 EPGESPIFWYAPESLTESKFSVASDVWSFGVVLYELFT 243
>pdb|3IO7|A Chain A, 2-Aminopyrazolo[1,5-A]pyrimidines As Potent And Selective
Inhibitors Of Jak2
pdb|3IOK|A Chain A, 2-Aminopyrazolo[1,5-A]pyrimidines As Potent And Selective
Inhibitors Of Jak2
pdb|3KCK|A Chain A, A Novel Chemotype Of Kinase Inhibitors
Length = 313
Score = 47.0 bits (110), Expect = 9e-06, Method: Compositional matrix adjust.
Identities = 44/158 (27%), Positives = 70/158 (44%), Gaps = 19/158 (12%)
Query: 20 ITYAAQMSHNHILKRIGCCLQTPIP--ILVFQSVEYGTLRDCIFGAP-----LPRLKIAS 72
I + H++I+K G C L+ + + YG+LRD + + L+ S
Sbjct: 80 IEILKSLQHDNIVKYKGVCYSAGRRNLKLIMEYLPYGSLRDYLQKHKERIDHIKLLQYTS 139
Query: 73 DIVNSLAYLHFGFPRPIVLRNFKTQNILFNEENVAKWFDFLLSISIPEGETHITTDRVIG 132
I + YL G R + R+ T+NIL EN K DF L+ +P+ + +
Sbjct: 140 QICKGMEYL--GTKR-YIHRDLATRNILVENENRVKIGDFGLTKVLPQDKEXXK----VK 192
Query: 133 TRGYS-----APEYISICVLNEKSNVFSFGAFLFELLA 165
G S APE ++ + S+V+SFG L+EL
Sbjct: 193 EPGESPIFWYAPESLTESKFSVASDVWSFGVVLYELFT 230
>pdb|3UGC|A Chain A, Structural Basis Of Jak2 Inhibition By The Type Ii
Inhibtor Nvp-Bbt594
Length = 295
Score = 47.0 bits (110), Expect = 9e-06, Method: Compositional matrix adjust.
Identities = 44/158 (27%), Positives = 70/158 (44%), Gaps = 19/158 (12%)
Query: 20 ITYAAQMSHNHILKRIGCCLQTPIP--ILVFQSVEYGTLRDCIFGAP-----LPRLKIAS 72
I + H++I+K G C L+ + + YG+LRD + + L+ S
Sbjct: 62 IEILKSLQHDNIVKYKGVCYSAGRRNLKLIMEYLPYGSLRDYLQKHKERIDHIKLLQYTS 121
Query: 73 DIVNSLAYLHFGFPRPIVLRNFKTQNILFNEENVAKWFDFLLSISIPEGETHITTDRVIG 132
I + YL G R + R+ T+NIL EN K DF L+ +P+ + +
Sbjct: 122 QICKGMEYL--GTKR-YIHRDLATRNILVENENRVKIGDFGLTKVLPQDKEFFK----VK 174
Query: 133 TRGYS-----APEYISICVLNEKSNVFSFGAFLFELLA 165
G S APE ++ + S+V+SFG L+EL
Sbjct: 175 EPGESPIFWYAPESLTESKFSVASDVWSFGVVLYELFT 212
>pdb|2W4O|A Chain A, Crystal Structure Of Human Camk4 In Complex With 4-Amino(
Sulfamoyl-Phenylamino)-Triazole-Carbothioic Acid (2,6-
Difluoro-Phenyl)-Amide)
Length = 349
Score = 47.0 bits (110), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 47/150 (31%), Positives = 72/150 (48%), Gaps = 15/150 (10%)
Query: 25 QMSHNHILKRIGCCLQTPIPI-LVFQSVEYGTLRDCIFGAPLPRLKIASD----IVNSLA 79
++SH +I+K + +TP I LV + V G L D I + A+D I+ ++A
Sbjct: 104 RLSHPNIIK-LKEIFETPTEISLVLELVTGGELFDRIVEKGYYSERDAADAVKQILEAVA 162
Query: 80 YLHFGFPRPIVLRNFKTQNILFNE---ENVAKWFDFLLSISIPEGETHITTDRVIGTRGY 136
YLH IV R+ K +N+L+ + K DF LS + E + V GT GY
Sbjct: 163 YLH---ENGIVHRDLKPENLLYATPAPDAPLKIADFGLSKIV---EHQVLMKTVCGTPGY 216
Query: 137 SAPEYISICVLNEKSNVFSFGAFLFELLAG 166
APE + C + +++S G + LL G
Sbjct: 217 CAPEILRGCAYGPEVDMWSVGIITYILLCG 246
>pdb|1OPL|A Chain A, Structural Basis For The Auto-Inhibition Of C-Abl Tyrosine
Kinase
pdb|1OPL|B Chain B, Structural Basis For The Auto-Inhibition Of C-Abl Tyrosine
Kinase
Length = 537
Score = 47.0 bits (110), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 36/145 (24%), Positives = 73/145 (50%), Gaps = 10/145 (6%)
Query: 25 QMSHNHILKRIGCCLQTPIPILVFQSVEYGTL----RDCIFGA--PLPRLKIASDIVNSL 78
++ H ++++ +G C + P ++ + + YG L R+C + L +A+ I +++
Sbjct: 311 EIKHPNLVQLLGVCTREPPFYIITEFMTYGNLLDYLRECNRQEVNAVVLLYMATQISSAM 370
Query: 79 AYLHFGFPRPIVLRNFKTQNILFNEENVAKWFDFLLSISIPEGETHITTDRVIGTRGYSA 138
YL + + RN +N L E ++ K DF LS + G+T+ ++A
Sbjct: 371 EYLE---KKNFIHRNLAARNCLVGENHLVKVADFGLS-RLMTGDTYTAHAGAKFPIKWTA 426
Query: 139 PEYISICVLNEKSNVFSFGAFLFEL 163
PE ++ + KS+V++FG L+E+
Sbjct: 427 PESLAYNKFSIKSDVWAFGVLLWEI 451
>pdb|3ORX|A Chain A, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Inhibitor 1f8
pdb|3ORX|B Chain B, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Inhibitor 1f8
pdb|3ORX|C Chain C, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Inhibitor 1f8
pdb|3ORX|D Chain D, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Inhibitor 1f8
pdb|3ORX|E Chain E, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Inhibitor 1f8
pdb|3ORX|F Chain F, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Inhibitor 1f8
pdb|3ORX|G Chain G, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Inhibitor 1f8
pdb|3ORX|H Chain H, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Inhibitor 1f8
pdb|3ORZ|A Chain A, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Activator 2a2
pdb|3ORZ|B Chain B, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Activator 2a2
pdb|3ORZ|C Chain C, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Activator 2a2
pdb|3ORZ|D Chain D, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Activator 2a2
pdb|3OTU|A Chain A, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Activator Js30
Length = 316
Score = 47.0 bits (110), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 26/95 (27%), Positives = 52/95 (54%), Gaps = 3/95 (3%)
Query: 72 SDIVNSLAYLHFGFPRPIVLRNFKTQNILFNEENVAKWFDFLLSISIPEGETHITTDRVI 131
++IV++L YLH + I+ R+ K +NIL NE+ + DF + + + +
Sbjct: 144 AEIVSALEYLH---GKGIIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANXFV 200
Query: 132 GTRGYSAPEYISICVLNEKSNVFSFGAFLFELLAG 166
GT Y +PE ++ + S++++ G +++L+AG
Sbjct: 201 GTAQYVSPELLTEKSACKSSDLWALGCIIYQLVAG 235
>pdb|2FO0|A Chain A, Organization Of The Sh3-Sh2 Unit In Active And Inactive
Forms Of The C-Abl Tyrosine Kinase
Length = 495
Score = 47.0 bits (110), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 36/145 (24%), Positives = 73/145 (50%), Gaps = 10/145 (6%)
Query: 25 QMSHNHILKRIGCCLQTPIPILVFQSVEYGTL----RDCIFGA--PLPRLKIASDIVNSL 78
++ H ++++ +G C + P ++ + + YG L R+C + L +A+ I +++
Sbjct: 269 EIKHPNLVQLLGVCTREPPFYIITEFMTYGNLLDYLRECNRQEVNAVVLLYMATQISSAM 328
Query: 79 AYLHFGFPRPIVLRNFKTQNILFNEENVAKWFDFLLSISIPEGETHITTDRVIGTRGYSA 138
YL + + RN +N L E ++ K DF LS + G+T+ ++A
Sbjct: 329 EYLE---KKNFIHRNLAARNCLVGENHLVKVADFGLS-RLMTGDTYTAHAGAKFPIKWTA 384
Query: 139 PEYISICVLNEKSNVFSFGAFLFEL 163
PE ++ + KS+V++FG L+E+
Sbjct: 385 PESLAYNKFSIKSDVWAFGVLLWEI 409
>pdb|3OXZ|A Chain A, Crystal Structure Of Abl Kinase Domain Bound With A
Dfg-Out Inhibitor Ap24534
Length = 284
Score = 46.6 bits (109), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 34/145 (23%), Positives = 73/145 (50%), Gaps = 10/145 (6%)
Query: 25 QMSHNHILKRIGCCLQTPIPILVFQSVEYGTLRDCIFG------APLPRLKIASDIVNSL 78
++ H ++++ +G C + P ++ + + YG L D + + + L +A+ I +++
Sbjct: 65 EIKHPNLVQLLGVCTREPPFYIITEFMTYGNLLDYLRECNRQEVSAVVLLYMATQISSAM 124
Query: 79 AYLHFGFPRPIVLRNFKTQNILFNEENVAKWFDFLLSISIPEGETHITTDRVIGTRGYSA 138
YL + + R+ +N L E ++ K DF LS + G+T+ ++A
Sbjct: 125 EYLE---KKNFIHRDLAARNCLVGENHLVKVADFGLS-RLMTGDTYTAHAGAKFPIKWTA 180
Query: 139 PEYISICVLNEKSNVFSFGAFLFEL 163
PE ++ + KS+V++FG L+E+
Sbjct: 181 PESLAYNKFSIKSDVWAFGVLLWEI 205
>pdb|2R7B|A Chain A, Crystal Structure Of The Phosphoinositide-Dependent
Kinase- 1 (Pdk-1)catalytic Domain Bound To A
Dibenzonaphthyridine Inhibitor
pdb|3ION|A Chain A, Pdk1 In Complex With Compound 8h
Length = 312
Score = 46.6 bits (109), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 26/95 (27%), Positives = 52/95 (54%), Gaps = 3/95 (3%)
Query: 72 SDIVNSLAYLHFGFPRPIVLRNFKTQNILFNEENVAKWFDFLLSISIPEGETHITTDRVI 131
++IV++L YLH + I+ R+ K +NIL NE+ + DF + + + +
Sbjct: 140 AEIVSALEYLH---GKGIIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANSFV 196
Query: 132 GTRGYSAPEYISICVLNEKSNVFSFGAFLFELLAG 166
GT Y +PE ++ + S++++ G +++L+AG
Sbjct: 197 GTAQYVSPELLTEKSACKSSDLWALGCIIYQLVAG 231
>pdb|3H9O|A Chain A, Phosphoinositide-Dependent Protein Kinase 1 (Pdk-1) In
Complex With Compound 9
Length = 311
Score = 46.6 bits (109), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 26/95 (27%), Positives = 52/95 (54%), Gaps = 3/95 (3%)
Query: 72 SDIVNSLAYLHFGFPRPIVLRNFKTQNILFNEENVAKWFDFLLSISIPEGETHITTDRVI 131
++IV++L YLH + I+ R+ K +NIL NE+ + DF + + + +
Sbjct: 139 AEIVSALEYLH---GKGIIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANXFV 195
Query: 132 GTRGYSAPEYISICVLNEKSNVFSFGAFLFELLAG 166
GT Y +PE ++ + S++++ G +++L+AG
Sbjct: 196 GTAQYVSPELLTEKSACKSSDLWALGCIIYQLVAG 230
>pdb|2XCH|A Chain A, Crystal Structure Of Pdk1 In Complex With A
Pyrazoloquinazoline Inhibitor
Length = 309
Score = 46.6 bits (109), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 26/95 (27%), Positives = 52/95 (54%), Gaps = 3/95 (3%)
Query: 72 SDIVNSLAYLHFGFPRPIVLRNFKTQNILFNEENVAKWFDFLLSISIPEGETHITTDRVI 131
++IV++L YLH + I+ R+ K +NIL NE+ + DF + + + +
Sbjct: 137 AEIVSALEYLH---GKGIIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANXFV 193
Query: 132 GTRGYSAPEYISICVLNEKSNVFSFGAFLFELLAG 166
GT Y +PE ++ + S++++ G +++L+AG
Sbjct: 194 GTAQYVSPELLTEKSACKSSDLWALGCIIYQLVAG 228
>pdb|2QOH|A Chain A, Crystal Structure Of Abl Kinase Bound With Ppy-a
pdb|2QOH|B Chain B, Crystal Structure Of Abl Kinase Bound With Ppy-a
pdb|3KF4|A Chain A, Structural Analysis Of Dfg-In And Dfg-Out Dual Src-Abl
Inhibitors Sharing A Common Vinyl Purine Template
pdb|3KF4|B Chain B, Structural Analysis Of Dfg-In And Dfg-Out Dual Src-Abl
Inhibitors Sharing A Common Vinyl Purine Template
pdb|3KFA|A Chain A, Structural Analysis Of Dfg-In And Dfg-Out Dual Src-Abl
Inhibitors Sharing A Common Vinyl Purine Template
pdb|3KFA|B Chain B, Structural Analysis Of Dfg-In And Dfg-Out Dual Src-Abl
Inhibitors Sharing A Common Vinyl Purine Template
Length = 288
Score = 46.6 bits (109), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 34/145 (23%), Positives = 73/145 (50%), Gaps = 10/145 (6%)
Query: 25 QMSHNHILKRIGCCLQTPIPILVFQSVEYGTLRDCIFG------APLPRLKIASDIVNSL 78
++ H ++++ +G C + P ++ + + YG L D + + + L +A+ I +++
Sbjct: 65 EIKHPNLVQLLGVCTREPPFYIITEFMTYGNLLDYLRECNRQEVSAVVLLYMATQISSAM 124
Query: 79 AYLHFGFPRPIVLRNFKTQNILFNEENVAKWFDFLLSISIPEGETHITTDRVIGTRGYSA 138
YL + + R+ +N L E ++ K DF LS + G+T+ ++A
Sbjct: 125 EYLE---KKNFIHRDLAARNCLVGENHLVKVADFGLS-RLMTGDTYTAHAGAKFPIKWTA 180
Query: 139 PEYISICVLNEKSNVFSFGAFLFEL 163
PE ++ + KS+V++FG L+E+
Sbjct: 181 PESLAYNKFSIKSDVWAFGVLLWEI 205
>pdb|3SC1|A Chain A, Novel Isoquinolone Pdk1 Inhibitors Discovered Through
Fragment-Based Lead Discovery
pdb|3RWQ|A Chain A, Discovery Of A Novel, Potent And Selective Inhibitor Of 3-
Phosphoinositide Dependent Kinase (Pdk1)
Length = 311
Score = 46.6 bits (109), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 26/95 (27%), Positives = 52/95 (54%), Gaps = 3/95 (3%)
Query: 72 SDIVNSLAYLHFGFPRPIVLRNFKTQNILFNEENVAKWFDFLLSISIPEGETHITTDRVI 131
++IV++L YLH + I+ R+ K +NIL NE+ + DF + + + +
Sbjct: 139 AEIVSALEYLH---GKGIIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANXFV 195
Query: 132 GTRGYSAPEYISICVLNEKSNVFSFGAFLFELLAG 166
GT Y +PE ++ + S++++ G +++L+AG
Sbjct: 196 GTAQYVSPELLTEKSACKSSDLWALGCIIYQLVAG 230
>pdb|3IOP|A Chain A, Pdk-1 In Complex With The Inhibitor Compound-8i
pdb|3QCQ|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) Kinase Domain
With 6-(3-
Amino-1h-Indazol-6-Yl)-N4-Ethyl-2,4-Pyrimidinediamine
pdb|3QCS|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) Kinase Domain
With 6-[2-
Amino-6-(4-Morpholinyl)-4-Pyrimidinyl]-1h-Indazol-3-
Amine
pdb|3QCX|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) Kinase Domain
With 6-{2-
Amino-6-[(3r)-3-Methyl-4-Morpholinyl]-4-Pyrimidinyl}-1h-
Indazol-3- Amine
pdb|3QCY|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) Kinase Domain
With 4-[2-
Amino-6-(3-Amino-1h-Indazol-6-Yl)-4-Pyrimidinyl]-N-
Phenyl-2- Morpholinecarboxamide
pdb|3QD0|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) Kinase Domain
With (2r,5s)-
1-[2-Amino-6-(3-Amino-1h-Indazol-6-Yl)-4-Pyrimidinyl]-6-
Methyl-N- Phenyl-3-Piperidinecarboxamide
pdb|3QD3|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) Kinase Domain
With 1,1- Dimethylethyl
{(3r,6s)-1-[2-Amino-6-(3-Amino-1h-Indazol-6-Yl)-4-
Pyrimidinyl]-6-Methyl-3-Piperidinyl}carbamate
pdb|3QD4|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) Kinase Domain
With 1,1-
Dimethylethyl{(3r,
5r)-1-[2-Amino-6-(3-Amino-1h-Indazol-6-Yl)-4-
Pyrimidinyl]-5-Methyl-3-Piperidinyl}carbamate
Length = 312
Score = 46.6 bits (109), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 26/95 (27%), Positives = 52/95 (54%), Gaps = 3/95 (3%)
Query: 72 SDIVNSLAYLHFGFPRPIVLRNFKTQNILFNEENVAKWFDFLLSISIPEGETHITTDRVI 131
++IV++L YLH + I+ R+ K +NIL NE+ + DF + + + +
Sbjct: 140 AEIVSALEYLH---GKGIIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANXFV 196
Query: 132 GTRGYSAPEYISICVLNEKSNVFSFGAFLFELLAG 166
GT Y +PE ++ + S++++ G +++L+AG
Sbjct: 197 GTAQYVSPELLTEKSACKSSDLWALGCIIYQLVAG 231
>pdb|2XCK|A Chain A, Crystal Structure Of Pdk1 In Complex With A
Pyrazoloquinazoline Inhibitor
Length = 309
Score = 46.6 bits (109), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 26/95 (27%), Positives = 52/95 (54%), Gaps = 3/95 (3%)
Query: 72 SDIVNSLAYLHFGFPRPIVLRNFKTQNILFNEENVAKWFDFLLSISIPEGETHITTDRVI 131
++IV++L YLH + I+ R+ K +NIL NE+ + DF + + + +
Sbjct: 137 AEIVSALEYLH---GKGIIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANXFV 193
Query: 132 GTRGYSAPEYISICVLNEKSNVFSFGAFLFELLAG 166
GT Y +PE ++ + S++++ G +++L+AG
Sbjct: 194 GTAQYVSPELLTEKSACKSSDLWALGCIIYQLVAG 228
>pdb|1UU3|A Chain A, Structure Of Human Pdk1 Kinase Domain In Complex With
Ly333531
pdb|1UU7|A Chain A, Structure Of Human Pdk1 Kinase Domain In Complex With
Bim-2
pdb|1UU8|A Chain A, Structure Of Human Pdk1 Kinase Domain In Complex With
Bim-1
pdb|1OKY|A Chain A, Structure Of Human Pdk1 Kinase Domain In Complex With
Staurosporine
pdb|1OKZ|A Chain A, Structure Of Human Pdk1 Kinase Domain In Complex With
Ucn-01
Length = 310
Score = 46.6 bits (109), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 26/95 (27%), Positives = 52/95 (54%), Gaps = 3/95 (3%)
Query: 72 SDIVNSLAYLHFGFPRPIVLRNFKTQNILFNEENVAKWFDFLLSISIPEGETHITTDRVI 131
++IV++L YLH + I+ R+ K +NIL NE+ + DF + + + +
Sbjct: 137 AEIVSALEYLH---GKGIIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANXFV 193
Query: 132 GTRGYSAPEYISICVLNEKSNVFSFGAFLFELLAG 166
GT Y +PE ++ + S++++ G +++L+AG
Sbjct: 194 GTAQYVSPELLTEKSACKSSDLWALGCIIYQLVAG 228
>pdb|3RWP|A Chain A, Discovery Of A Novel, Potent And Selective Inhibitor Of 3-
Phosphoinositide Dependent Kinase (Pdk1)
Length = 311
Score = 46.6 bits (109), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 26/95 (27%), Positives = 52/95 (54%), Gaps = 3/95 (3%)
Query: 72 SDIVNSLAYLHFGFPRPIVLRNFKTQNILFNEENVAKWFDFLLSISIPEGETHITTDRVI 131
++IV++L YLH + I+ R+ K +NIL NE+ + DF + + + +
Sbjct: 139 AEIVSALEYLH---GKGIIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANXFV 195
Query: 132 GTRGYSAPEYISICVLNEKSNVFSFGAFLFELLAG 166
GT Y +PE ++ + S++++ G +++L+AG
Sbjct: 196 GTAQYVSPELLTEKSACKSSDLWALGCIIYQLVAG 230
>pdb|3QC4|A Chain A, Pdk1 In Complex With Dfg-Out Inhibitor Xxx
pdb|3QC4|B Chain B, Pdk1 In Complex With Dfg-Out Inhibitor Xxx
Length = 314
Score = 46.6 bits (109), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 26/95 (27%), Positives = 52/95 (54%), Gaps = 3/95 (3%)
Query: 72 SDIVNSLAYLHFGFPRPIVLRNFKTQNILFNEENVAKWFDFLLSISIPEGETHITTDRVI 131
++IV++L YLH + I+ R+ K +NIL NE+ + DF + + + +
Sbjct: 142 AEIVSALEYLH---GKGIIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANXFV 198
Query: 132 GTRGYSAPEYISICVLNEKSNVFSFGAFLFELLAG 166
GT Y +PE ++ + S++++ G +++L+AG
Sbjct: 199 GTAQYVSPELLTEKSACKSSDLWALGCIIYQLVAG 233
>pdb|3QRJ|A Chain A, The Crystal Structure Of Human Abl1 Kinase Domain T315i
Mutant In Complex With Dcc-2036
pdb|3QRJ|B Chain B, The Crystal Structure Of Human Abl1 Kinase Domain T315i
Mutant In Complex With Dcc-2036
Length = 277
Score = 46.6 bits (109), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 34/145 (23%), Positives = 72/145 (49%), Gaps = 10/145 (6%)
Query: 25 QMSHNHILKRIGCCLQTPIPILVFQSVEYGTLRDCIFGA------PLPRLKIASDIVNSL 78
++ H ++++ +G C + P ++ + + YG L D + + L +A+ I +++
Sbjct: 70 EIKHPNLVQLLGVCTREPPFYIIIEFMTYGNLLDYLRECNRQEVNAVVLLYMATQISSAM 129
Query: 79 AYLHFGFPRPIVLRNFKTQNILFNEENVAKWFDFLLSISIPEGETHITTDRVIGTRGYSA 138
YL + + R+ +N L E ++ K DF LS + G+T+ ++A
Sbjct: 130 EYLE---KKNFIHRDLAARNCLVGENHLVKVADFGLS-RLMTGDTYTAHAGAKFPIKWTA 185
Query: 139 PEYISICVLNEKSNVFSFGAFLFEL 163
PE ++ + KS+V++FG L+E+
Sbjct: 186 PESLAYNKFSIKSDVWAFGVLLWEI 210
>pdb|3NUS|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) With Fragment8
pdb|3NUU|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) With Fragment11
pdb|3NUY|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) With Fragment17
Length = 286
Score = 46.6 bits (109), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 26/96 (27%), Positives = 52/96 (54%), Gaps = 3/96 (3%)
Query: 71 ASDIVNSLAYLHFGFPRPIVLRNFKTQNILFNEENVAKWFDFLLSISIPEGETHITTDRV 130
++IV++L YLH + I+ R+ K +NIL NE+ + DF + + +
Sbjct: 114 TAEIVSALEYLH---GKGIIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANXF 170
Query: 131 IGTRGYSAPEYISICVLNEKSNVFSFGAFLFELLAG 166
+GT Y +PE ++ + S++++ G +++L+AG
Sbjct: 171 VGTAQYVSPELLTEKSACKSSDLWALGCIIYQLVAG 206
>pdb|1FPU|A Chain A, Crystal Structure Of Abl Kinase Domain In Complex With A
Small Molecule Inhibitor
pdb|1FPU|B Chain B, Crystal Structure Of Abl Kinase Domain In Complex With A
Small Molecule Inhibitor
pdb|1IEP|A Chain A, Crystal Structure Of The C-Abl Kinase Domain In Complex
With Sti-571.
pdb|1IEP|B Chain B, Crystal Structure Of The C-Abl Kinase Domain In Complex
With Sti-571.
pdb|1M52|A Chain A, Crystal Structure Of The C-Abl Kinase Domain In Complex
With Pd173955
pdb|1M52|B Chain B, Crystal Structure Of The C-Abl Kinase Domain In Complex
With Pd173955
pdb|1OPJ|A Chain A, Structural Basis For The Auto-Inhibition Of C-Abl Tyrosine
Kinase
pdb|1OPJ|B Chain B, Structural Basis For The Auto-Inhibition Of C-Abl Tyrosine
Kinase
pdb|2HZN|A Chain A, Abl Kinase Domain In Complex With Nvp-Afg210
pdb|3K5V|A Chain A, Structure Of Abl Kinase In Complex With Imatinib And Gnf-2
pdb|3K5V|B Chain B, Structure Of Abl Kinase In Complex With Imatinib And Gnf-2
pdb|3MS9|A Chain A, Abl Kinase In Complex With Imatinib And A Fragment (Frag1)
I Myristate Pocket
pdb|3MS9|B Chain B, Abl Kinase In Complex With Imatinib And A Fragment (Frag1)
I Myristate Pocket
pdb|3MSS|A Chain A, Abl Kinase In Complex With Imatinib And Fragment (Frag2)
In The Myristate Site
pdb|3MSS|B Chain B, Abl Kinase In Complex With Imatinib And Fragment (Frag2)
In The Myristate Site
pdb|3MSS|C Chain C, Abl Kinase In Complex With Imatinib And Fragment (Frag2)
In The Myristate Site
pdb|3MSS|D Chain D, Abl Kinase In Complex With Imatinib And Fragment (Frag2)
In The Myristate Site
Length = 293
Score = 46.6 bits (109), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 34/145 (23%), Positives = 73/145 (50%), Gaps = 10/145 (6%)
Query: 25 QMSHNHILKRIGCCLQTPIPILVFQSVEYGTLRDCIFG------APLPRLKIASDIVNSL 78
++ H ++++ +G C + P ++ + + YG L D + + + L +A+ I +++
Sbjct: 70 EIKHPNLVQLLGVCTREPPFYIITEFMTYGNLLDYLRECNRQEVSAVVLLYMATQISSAM 129
Query: 79 AYLHFGFPRPIVLRNFKTQNILFNEENVAKWFDFLLSISIPEGETHITTDRVIGTRGYSA 138
YL + + R+ +N L E ++ K DF LS + G+T+ ++A
Sbjct: 130 EYLE---KKNFIHRDLAARNCLVGENHLVKVADFGLS-RLMTGDTYTAHAGAKFPIKWTA 185
Query: 139 PEYISICVLNEKSNVFSFGAFLFEL 163
PE ++ + KS+V++FG L+E+
Sbjct: 186 PESLAYNKFSIKSDVWAFGVLLWEI 210
>pdb|1UU9|A Chain A, Structure Of Human Pdk1 Kinase Domain In Complex With
Bim-3
Length = 286
Score = 46.6 bits (109), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 26/96 (27%), Positives = 52/96 (54%), Gaps = 3/96 (3%)
Query: 71 ASDIVNSLAYLHFGFPRPIVLRNFKTQNILFNEENVAKWFDFLLSISIPEGETHITTDRV 130
++IV++L YLH + I+ R+ K +NIL NE+ + DF + + +
Sbjct: 115 TAEIVSALEYLH---GKGIIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANXF 171
Query: 131 IGTRGYSAPEYISICVLNEKSNVFSFGAFLFELLAG 166
+GT Y +PE ++ + S++++ G +++L+AG
Sbjct: 172 VGTAQYVSPELLTEKSACKSSDLWALGCIIYQLVAG 207
>pdb|3HRC|A Chain A, Crystal Structure Of A Mutant Of Human Pdk1 Kinase Domain
In Complex With Atp
pdb|3HRF|A Chain A, Crystal Structure Of Human Pdk1 Kinase Domain In Complex
With An Allosteric Activator Bound To The Pif-Pocket
pdb|3RCJ|A Chain A, Rapid Preparation Of Triazolyl Substituted Nh-Heterocyclic
Kinase Inhibitors Via One-Pot Sonogashira Coupling
Tms-Deprotection Cuaac Sequence
pdb|4A06|A Chain A, Human Pdk1 Kinase Domain In Complex With Allosteric
Activator Ps114 Bound To The Pif-Pocket
pdb|4AW1|A Chain A, Human Pdk1 Kinase Domain In Complex With Allosteric
Compound Ps210 Bound To The Pif-Pocket
Length = 311
Score = 46.6 bits (109), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 26/95 (27%), Positives = 52/95 (54%), Gaps = 3/95 (3%)
Query: 72 SDIVNSLAYLHFGFPRPIVLRNFKTQNILFNEENVAKWFDFLLSISIPEGETHITTDRVI 131
++IV++L YLH + I+ R+ K +NIL NE+ + DF + + + +
Sbjct: 139 AEIVSALEYLH---GKGIIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANXFV 195
Query: 132 GTRGYSAPEYISICVLNEKSNVFSFGAFLFELLAG 166
GT Y +PE ++ + S++++ G +++L+AG
Sbjct: 196 GTAQYVSPELLTEKSACKSSDLWALGCIIYQLVAG 230
>pdb|1Z5M|A Chain A, Crystal Structure Of
N1-[3-[[5-bromo-2-[[3-[(1-pyrrolidinylcarbonyl)
Amino]phenyl]amino]-4-pyrimidinyl]amino]propyl]-2,2-
Dimethylpropanediamide Complexed With Human Pdk1
pdb|2PE0|A Chain A, Crystal Structure Of Human Phosphoinositide-Dependent
Protein Kinase 1 (Pdk1)
5-Hydroxy-3-[1-(1h-Pyrrol-2-Yl)-Eth-(Z)-Ylidene]-1,
3-Dihydro- Indol-2-One Complex
pdb|2PE1|A Chain A, Crystal Structure Of Human Phosphoinositide-Dependent
Protein Kinase 1 (Pdk1)
{2-Oxo-3-[1-(1h-Pyrrol-2-Yl)-Eth-(Z)-Ylidene]-2,
3-Dihydro-1h- Indol-5-Yl}-Urea {bx-517} Complex
pdb|2PE2|A Chain A, Crystal Structure Of Human Phosphoinositide-Dependent
Protein Kinase 1 (Pdk1)
3-{5-[2-Oxo-5-Ureido-1,
2-Dihydro-Indol-(3z)-Ylidenemethyl]-1h-
Pyrrol-3-Yl}-N-(2-Piperidin-1-Yl-Ethyl)-Benzamide
Complex
Length = 286
Score = 46.6 bits (109), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 26/96 (27%), Positives = 52/96 (54%), Gaps = 3/96 (3%)
Query: 71 ASDIVNSLAYLHFGFPRPIVLRNFKTQNILFNEENVAKWFDFLLSISIPEGETHITTDRV 130
++IV++L YLH + I+ R+ K +NIL NE+ + DF + + +
Sbjct: 113 TAEIVSALEYLH---GKGIIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANXF 169
Query: 131 IGTRGYSAPEYISICVLNEKSNVFSFGAFLFELLAG 166
+GT Y +PE ++ + S++++ G +++L+AG
Sbjct: 170 VGTAQYVSPELLTEKSACKSSDLWALGCIIYQLVAG 205
>pdb|2BIY|A Chain A, Structure Of Pdk1-S241a Mutant Kinase Domain
Length = 310
Score = 46.6 bits (109), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 26/95 (27%), Positives = 52/95 (54%), Gaps = 3/95 (3%)
Query: 72 SDIVNSLAYLHFGFPRPIVLRNFKTQNILFNEENVAKWFDFLLSISIPEGETHITTDRVI 131
++IV++L YLH + I+ R+ K +NIL NE+ + DF + + + +
Sbjct: 137 AEIVSALEYLH---GKGIIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANAFV 193
Query: 132 GTRGYSAPEYISICVLNEKSNVFSFGAFLFELLAG 166
GT Y +PE ++ + S++++ G +++L+AG
Sbjct: 194 GTAQYVSPELLTEKSACKSSDLWALGCIIYQLVAG 228
>pdb|1H1W|A Chain A, High Resolution Crystal Structure Of The Human Pdk1
Catalytic Domain
pdb|1UVR|A Chain A, Structure Of Human Pdk1 Kinase Domain In Complex With
Bim-8
Length = 289
Score = 46.6 bits (109), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 26/96 (27%), Positives = 52/96 (54%), Gaps = 3/96 (3%)
Query: 71 ASDIVNSLAYLHFGFPRPIVLRNFKTQNILFNEENVAKWFDFLLSISIPEGETHITTDRV 130
++IV++L YLH + I+ R+ K +NIL NE+ + DF + + +
Sbjct: 116 TAEIVSALEYLH---GKGIIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANXF 172
Query: 131 IGTRGYSAPEYISICVLNEKSNVFSFGAFLFELLAG 166
+GT Y +PE ++ + S++++ G +++L+AG
Sbjct: 173 VGTAQYVSPELLTEKSACKSSDLWALGCIIYQLVAG 208
>pdb|1QPD|A Chain A, Structural Analysis Of The Lymphocyte-specific Kinase Lck
In Complex With Non-selective And Src Family Selective
Kinase Inhibitors
Length = 279
Score = 46.6 bits (109), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 53/225 (23%), Positives = 90/225 (40%), Gaps = 43/225 (19%)
Query: 25 QMSHNHILKRIGCCLQTPIPILVFQSVEYGTLRDCIFGAPLPRLKI------ASDIVNSL 78
Q+ H +++ Q PI I+ + +E G+L D + +L I A+ I +
Sbjct: 64 QLQHQRLVRLYAVVTQEPIYIIT-EYMENGSLVDFLKTPSGIKLTINKLLDMAAQIAEGM 122
Query: 79 AYLHFGFPRPIVLRNFKTQNILFNEENVAKWFDFLLSISIPEGETHITTDRVIGTRGYSA 138
A++ R + R+ + NIL ++ K DF L+ I + E + ++A
Sbjct: 123 AFIE---ERNYIHRDLRAANILVSDTLSCKIADFGLARLIEDAEXTAREGAKFPIK-WTA 178
Query: 139 PEYISICVLNEKSNVFSFGAFLFELLA-GRIHIWDLLKDTHDHGCFFNEYLKNYLEDKRF 197
PE I+ KS+V+SFG L E++ GRI +
Sbjct: 179 PEAINYGTFTIKSDVWSFGILLTEIVTHGRIP---------------------------Y 211
Query: 198 TGIPAPIIVQDIP----CIEKEQQLHASAQLTLECVNNSPEDRPT 238
G+ P ++Q++ + + QL C PEDRPT
Sbjct: 212 PGMTNPEVIQNLERGYRMVRPDNCPEELYQLMRLCWKERPEDRPT 256
>pdb|3LCK|A Chain A, The Kinase Domain Of Human Lymphocyte Kinase (Lck),
Activated Form (Auto-Phosphorylated On Tyr394)
pdb|3BYO|A Chain A, X-Ray Co-Crystal Structure Of 2-Amino-6-Phenylpyrimido[5',
4':5,6]pyrimido[1,2-A]benzimidazol-5(6h)-One 25 Bound To
Lck
Length = 271
Score = 46.6 bits (109), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 53/225 (23%), Positives = 90/225 (40%), Gaps = 43/225 (19%)
Query: 25 QMSHNHILKRIGCCLQTPIPILVFQSVEYGTLRDCIFGAPLPRLKI------ASDIVNSL 78
Q+ H +++ Q PI I+ + +E G+L D + +L I A+ I +
Sbjct: 64 QLQHQRLVRLYAVVTQEPIYIIT-EYMENGSLVDFLKTPSGIKLTINKLLDMAAQIAEGM 122
Query: 79 AYLHFGFPRPIVLRNFKTQNILFNEENVAKWFDFLLSISIPEGETHITTDRVIGTRGYSA 138
A++ R + R+ + NIL ++ K DF L+ I + E + ++A
Sbjct: 123 AFIE---ERNYIHRDLRAANILVSDTLSCKIADFGLARLIEDNEXTAREGAKFPIK-WTA 178
Query: 139 PEYISICVLNEKSNVFSFGAFLFELLA-GRIHIWDLLKDTHDHGCFFNEYLKNYLEDKRF 197
PE I+ KS+V+SFG L E++ GRI +
Sbjct: 179 PEAINYGTFTIKSDVWSFGILLTEIVTHGRIP---------------------------Y 211
Query: 198 TGIPAPIIVQDIP----CIEKEQQLHASAQLTLECVNNSPEDRPT 238
G+ P ++Q++ + + QL C PEDRPT
Sbjct: 212 PGMTNPEVIQNLERGYRMVRPDNCPEELYQLMRLCWKERPEDRPT 256
>pdb|3BYM|A Chain A, X-Ray Co-Crystal Structure Aminobenzimidazole Triazine 1
Bound To Lck
Length = 272
Score = 46.6 bits (109), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 53/225 (23%), Positives = 90/225 (40%), Gaps = 43/225 (19%)
Query: 25 QMSHNHILKRIGCCLQTPIPILVFQSVEYGTLRDCIFGAPLPRLKI------ASDIVNSL 78
Q+ H +++ Q PI I+ + +E G+L D + +L I A+ I +
Sbjct: 65 QLQHQRLVRLYAVVTQEPIYIIT-EYMENGSLVDFLKTPSGIKLTINKLLDMAAQIAEGM 123
Query: 79 AYLHFGFPRPIVLRNFKTQNILFNEENVAKWFDFLLSISIPEGETHITTDRVIGTRGYSA 138
A++ R + R+ + NIL ++ K DF L+ I + E + ++A
Sbjct: 124 AFIE---ERNYIHRDLRAANILVSDTLSCKIADFGLARLIEDNEXTAREGAKFPIK-WTA 179
Query: 139 PEYISICVLNEKSNVFSFGAFLFELLA-GRIHIWDLLKDTHDHGCFFNEYLKNYLEDKRF 197
PE I+ KS+V+SFG L E++ GRI +
Sbjct: 180 PEAINYGTFTIKSDVWSFGILLTEIVTHGRIP---------------------------Y 212
Query: 198 TGIPAPIIVQDIP----CIEKEQQLHASAQLTLECVNNSPEDRPT 238
G+ P ++Q++ + + QL C PEDRPT
Sbjct: 213 PGMTNPEVIQNLERGYRMVRPDNCPEELYQLMRLCWKERPEDRPT 257
>pdb|3NUN|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) With Lead
Compound
Length = 292
Score = 46.6 bits (109), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 26/95 (27%), Positives = 52/95 (54%), Gaps = 3/95 (3%)
Query: 72 SDIVNSLAYLHFGFPRPIVLRNFKTQNILFNEENVAKWFDFLLSISIPEGETHITTDRVI 131
++IV++L YLH + I+ R+ K +NIL NE+ + DF + + + +
Sbjct: 121 AEIVSALEYLH---GKGIIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANXFV 177
Query: 132 GTRGYSAPEYISICVLNEKSNVFSFGAFLFELLAG 166
GT Y +PE ++ + S++++ G +++L+AG
Sbjct: 178 GTAQYVSPELLTEKSACKSSDLWALGCIIYQLVAG 212
>pdb|3NAX|A Chain A, Pdk1 In Complex With Inhibitor Mp7
Length = 311
Score = 46.6 bits (109), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 26/95 (27%), Positives = 52/95 (54%), Gaps = 3/95 (3%)
Query: 72 SDIVNSLAYLHFGFPRPIVLRNFKTQNILFNEENVAKWFDFLLSISIPEGETHITTDRVI 131
++IV++L YLH + I+ R+ K +NIL NE+ + DF + + + +
Sbjct: 136 AEIVSALEYLH---GKGIIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANSFV 192
Query: 132 GTRGYSAPEYISICVLNEKSNVFSFGAFLFELLAG 166
GT Y +PE ++ + S++++ G +++L+AG
Sbjct: 193 GTAQYVSPELLTEKSACKSSDLWALGCIIYQLVAG 227
>pdb|3NAY|A Chain A, Pdk1 In Complex With Inhibitor Mp6
pdb|3NAY|B Chain B, Pdk1 In Complex With Inhibitor Mp6
Length = 311
Score = 46.6 bits (109), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 26/95 (27%), Positives = 52/95 (54%), Gaps = 3/95 (3%)
Query: 72 SDIVNSLAYLHFGFPRPIVLRNFKTQNILFNEENVAKWFDFLLSISIPEGETHITTDRVI 131
++IV++L YLH + I+ R+ K +NIL NE+ + DF + + + +
Sbjct: 136 AEIVSALEYLH---GKGIIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANXFV 192
Query: 132 GTRGYSAPEYISICVLNEKSNVFSFGAFLFELLAG 166
GT Y +PE ++ + S++++ G +++L+AG
Sbjct: 193 GTAQYVSPELLTEKSACKSSDLWALGCIIYQLVAG 227
>pdb|2OFU|A Chain A, X-Ray Crystal Structure Of 2-Aminopyrimidine Carbamate 43
Bound To Lck
Length = 273
Score = 46.6 bits (109), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 53/225 (23%), Positives = 90/225 (40%), Gaps = 43/225 (19%)
Query: 25 QMSHNHILKRIGCCLQTPIPILVFQSVEYGTLRDCIFGAPLPRLKI------ASDIVNSL 78
Q+ H +++ Q PI I+ + +E G+L D + +L I A+ I +
Sbjct: 66 QLQHQRLVRLYAVVTQEPIYIIT-EYMENGSLVDFLKTPSGIKLTINKLLDMAAQIAEGM 124
Query: 79 AYLHFGFPRPIVLRNFKTQNILFNEENVAKWFDFLLSISIPEGETHITTDRVIGTRGYSA 138
A++ R + R+ + NIL ++ K DF L+ I + E + ++A
Sbjct: 125 AFIE---ERNYIHRDLRAANILVSDTLSCKIADFGLARLIEDNEXTAREGAKFPIK-WTA 180
Query: 139 PEYISICVLNEKSNVFSFGAFLFELLA-GRIHIWDLLKDTHDHGCFFNEYLKNYLEDKRF 197
PE I+ KS+V+SFG L E++ GRI +
Sbjct: 181 PEAINYGTFTIKSDVWSFGILLTEIVTHGRIP---------------------------Y 213
Query: 198 TGIPAPIIVQDIP----CIEKEQQLHASAQLTLECVNNSPEDRPT 238
G+ P ++Q++ + + QL C PEDRPT
Sbjct: 214 PGMTNPEVIQNLERGYRMVRPDNCPEELYQLMRLCWKERPEDRPT 258
>pdb|1QCF|A Chain A, Crystal Structure Of Hck In Complex With A Src Family-
Selective Tyrosine Kinase Inhibitor
pdb|2C0I|A Chain A, Src Family Kinase Hck With Bound Inhibitor A-420983
pdb|2C0I|B Chain B, Src Family Kinase Hck With Bound Inhibitor A-420983
pdb|2C0O|A Chain A, Src Family Kinase Hck With Bound Inhibitor A-770041
pdb|2C0O|B Chain B, Src Family Kinase Hck With Bound Inhibitor A-770041
pdb|2C0T|A Chain A, Src Family Kinase Hck With Bound Inhibitor A-641359
pdb|2C0T|B Chain B, Src Family Kinase Hck With Bound Inhibitor A-641359
Length = 454
Score = 46.2 bits (108), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 56/220 (25%), Positives = 97/220 (44%), Gaps = 35/220 (15%)
Query: 26 MSHNHILKRIGCCLQTPIPILVFQSVEYGTLRDCIFG-----APLPRL-KIASDIVNSLA 79
+ H+ ++K + PI I+ + + G+L D + PLP+L ++ I +A
Sbjct: 240 LQHDKLVKLHAVVTKEPIYIIT-EFMAKGSLLDFLKSDEGSKQPLPKLIDFSAQIAEGMA 298
Query: 80 YLHFGFPRPIVLRNFKTQNILFNEENVAKWFDFLLSISIPEGETHITTDRVIGTRGYSAP 139
++ R + R+ + NIL + V K DF L+ I + E + ++AP
Sbjct: 299 FIE---QRNYIHRDLRAANILVSASLVCKIADFGLARVIEDNEYTAREGAKFPIK-WTAP 354
Query: 140 EYISICVLNEKSNVFSFGAFLFELLA-GRIHIWDLLKDTHDHGCFFNEYLKNYLEDKRFT 198
E I+ KS+V+SFG L E++ GRI + N + LE R
Sbjct: 355 EAINFGSFTIKSDVWSFGILLMEIVTYGRI----------PYPGMSNPEVIRALE--RGY 402
Query: 199 GIPAPIIVQDIPCIEKEQQLHASAQLTLECVNNSPEDRPT 238
+P P ++ P ++L+ + + C N PE+RPT
Sbjct: 403 RMPRP---ENCP-----EELY---NIMMRCWKNRPEERPT 431
>pdb|2HK5|A Chain A, Hck Kinase In Complex With Lck Targetted Inhibitor Pg-
1009247
Length = 270
Score = 46.2 bits (108), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 56/220 (25%), Positives = 98/220 (44%), Gaps = 35/220 (15%)
Query: 26 MSHNHILKRIGCCLQTPIPILVFQSVEYGTLRDCIFG-----APLPRL-KIASDIVNSLA 79
+ H+ ++K + PI I+ + + G+L D + PLP+L ++ I +A
Sbjct: 67 LQHDKLVKLHAVVTKEPIYIIT-EFMAKGSLLDFLKSDEGSKQPLPKLIDFSAQIAEGMA 125
Query: 80 YLHFGFPRPIVLRNFKTQNILFNEENVAKWFDFLLSISIPEGETHITTDRVIGTRGYSAP 139
++ R + R+ + NIL + V K DF L+ I + E + + ++AP
Sbjct: 126 FIE---QRNYIHRDLRAANILVSASLVCKIADFGLARVIEDNE-YTAREGAKFPIKWTAP 181
Query: 140 EYISICVLNEKSNVFSFGAFLFELLA-GRIHIWDLLKDTHDHGCFFNEYLKNYLEDKRFT 198
E I+ KS+V+SFG L E++ GRI + N + LE R
Sbjct: 182 EAINFGSFTIKSDVWSFGILLMEIVTYGRI----------PYPGMSNPEVIRALE--RGY 229
Query: 199 GIPAPIIVQDIPCIEKEQQLHASAQLTLECVNNSPEDRPT 238
+P P ++ P ++L+ + + C N PE+RPT
Sbjct: 230 RMPRP---ENCP-----EELY---NIMMRCWKNRPEERPT 258
>pdb|3DK7|A Chain A, Crystal Structure Of Mutant Abl Kinase Domain In Complex
With Small Molecule Fragment
pdb|3DK7|B Chain B, Crystal Structure Of Mutant Abl Kinase Domain In Complex
With Small Molecule Fragment
Length = 277
Score = 46.2 bits (108), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 34/145 (23%), Positives = 72/145 (49%), Gaps = 10/145 (6%)
Query: 25 QMSHNHILKRIGCCLQTPIPILVFQSVEYGTLRDCIFG------APLPRLKIASDIVNSL 78
++ H ++++ +G C + P ++ + + YG L D + + + L +A+ I +++
Sbjct: 63 EIKHPNLVQLLGVCTREPPFYIIIEFMTYGNLLDYLRECNRQEVSAVVLLYMATQISSAM 122
Query: 79 AYLHFGFPRPIVLRNFKTQNILFNEENVAKWFDFLLSISIPEGETHITTDRVIGTRGYSA 138
YL + + R+ +N L E ++ K DF LS + G+T ++A
Sbjct: 123 EYLE---KKNFIHRDLAARNCLVGENHLVKVADFGLS-RLMTGDTXTAHAGAKFPIKWTA 178
Query: 139 PEYISICVLNEKSNVFSFGAFLFEL 163
PE ++ + KS+V++FG L+E+
Sbjct: 179 PESLAYNKFSIKSDVWAFGVLLWEI 203
>pdb|3ZGW|A Chain A, Crystal Structure Of Maternal Embryonic Leucine Zipper
Kinase (melk) In Complex With Amp-pnp
Length = 347
Score = 46.2 bits (108), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 30/94 (31%), Positives = 49/94 (52%), Gaps = 5/94 (5%)
Query: 74 IVNSLAYLHFGFPRPIVLRNFKTQNILFNEENVAKWFDFLLSISIPEGETHITTDRVIGT 133
IV+++AY+H + R+ K +N+LF+E + K DF L P+G G+
Sbjct: 117 IVSAVAYVH---SQGYAHRDLKPENLLFDEYHKLKLIDFGLCAK-PKGNKDYHLQTCCGS 172
Query: 134 RGYSAPEYI-SICVLNEKSNVFSFGAFLFELLAG 166
Y+APE I L +++V+S G L+ L+ G
Sbjct: 173 LAYAAPELIQGKSYLGSEADVWSMGILLYVLMCG 206
>pdb|1QPE|A Chain A, Structural Analysis Of The Lymphocyte-Specific Kinase Lck
In Complex With Non-Selective And Src Family Selective
Kinase Inhibitors
pdb|1QPJ|A Chain A, Crystal Structure Of The Lymphocyte-Specific Kinase Lck In
Complex With Staurosporine.
pdb|1QPC|A Chain A, Structural Analysis Of The Lymphocyte-Specific Kinase Lck
In Complex With Non-Selective And Src Family Selective
Kinase Inhibitors
Length = 279
Score = 46.2 bits (108), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 53/225 (23%), Positives = 90/225 (40%), Gaps = 43/225 (19%)
Query: 25 QMSHNHILKRIGCCLQTPIPILVFQSVEYGTLRDCIFGAPLPRLKI------ASDIVNSL 78
Q+ H +++ Q PI I+ + +E G+L D + +L I A+ I +
Sbjct: 64 QLQHQRLVRLYAVVTQEPIYIIT-EYMENGSLVDFLKTPSGIKLTINKLLDMAAQIAEGM 122
Query: 79 AYLHFGFPRPIVLRNFKTQNILFNEENVAKWFDFLLSISIPEGETHITTDRVIGTRGYSA 138
A++ R + R+ + NIL ++ K DF L+ I + E + ++A
Sbjct: 123 AFIE---ERNYIHRDLRAANILVSDTLSCKIADFGLARLIEDNEXTAREGAKFPIK-WTA 178
Query: 139 PEYISICVLNEKSNVFSFGAFLFELLA-GRIHIWDLLKDTHDHGCFFNEYLKNYLEDKRF 197
PE I+ KS+V+SFG L E++ GRI +
Sbjct: 179 PEAINYGTFTIKSDVWSFGILLTEIVTHGRIP---------------------------Y 211
Query: 198 TGIPAPIIVQDIP----CIEKEQQLHASAQLTLECVNNSPEDRPT 238
G+ P ++Q++ + + QL C PEDRPT
Sbjct: 212 PGMTNPEVIQNLERGYRMVRPDNCPEELYQLMRLCWKERPEDRPT 256
>pdb|2OG8|A Chain A, Crystal Structure Of Aminoquinazoline 36 Bound To Lck
pdb|2OG8|B Chain B, Crystal Structure Of Aminoquinazoline 36 Bound To Lck
Length = 265
Score = 46.2 bits (108), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 53/225 (23%), Positives = 91/225 (40%), Gaps = 43/225 (19%)
Query: 25 QMSHNHILKRIGCCLQTPIPILVFQSVEYGTLRDCIFGAPLPRLKI------ASDIVNSL 78
Q+ H +++ Q PI I+ + +E G+L D + +L I A+ I +
Sbjct: 59 QLQHQRLVRLYAVVTQEPIYIIT-EYMENGSLVDFLKTPSGIKLTINKLLDMAAQIAEGM 117
Query: 79 AYLHFGFPRPIVLRNFKTQNILFNEENVAKWFDFLLSISIPEGETHITTDRVIGTRGYSA 138
A++ R + R+ + NIL ++ K DF L+ I + E + + ++A
Sbjct: 118 AFIE---ERNYIHRDLRAANILVSDTLSCKIADFGLARLIEDNE-YTAREGAKFPIKWTA 173
Query: 139 PEYISICVLNEKSNVFSFGAFLFELLA-GRIHIWDLLKDTHDHGCFFNEYLKNYLEDKRF 197
PE I+ KS+V+SFG L E++ GRI +
Sbjct: 174 PEAINYGTFTIKSDVWSFGILLTEIVTHGRIP---------------------------Y 206
Query: 198 TGIPAPIIVQDIP----CIEKEQQLHASAQLTLECVNNSPEDRPT 238
G+ P ++Q++ + + QL C PEDRPT
Sbjct: 207 PGMTNPEVIQNLERGYRMVRPDNCPEELYQLMRLCWKERPEDRPT 251
>pdb|2OF2|A Chain A, Crystal Structure Of Furanopyrimidine 8 Bound To Lck
pdb|2OF4|A Chain A, Crystal Structure Of Furanopyrimidine 1 Bound To Lck
Length = 271
Score = 46.2 bits (108), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 53/225 (23%), Positives = 91/225 (40%), Gaps = 43/225 (19%)
Query: 25 QMSHNHILKRIGCCLQTPIPILVFQSVEYGTLRDCIFGAPLPRLKI------ASDIVNSL 78
Q+ H +++ Q PI I+ + +E G+L D + +L I A+ I +
Sbjct: 64 QLQHQRLVRLYAVVTQEPIYIIT-EYMENGSLVDFLKTPSGIKLTINKLLDMAAQIAEGM 122
Query: 79 AYLHFGFPRPIVLRNFKTQNILFNEENVAKWFDFLLSISIPEGETHITTDRVIGTRGYSA 138
A++ R + R+ + NIL ++ K DF L+ I + E + + ++A
Sbjct: 123 AFIE---ERNYIHRDLRAANILVSDTLSCKIADFGLARLIEDNE-YTAREGAKFPIKWTA 178
Query: 139 PEYISICVLNEKSNVFSFGAFLFELLA-GRIHIWDLLKDTHDHGCFFNEYLKNYLEDKRF 197
PE I+ KS+V+SFG L E++ GRI +
Sbjct: 179 PEAINYGTFTIKSDVWSFGILLTEIVTHGRIP---------------------------Y 211
Query: 198 TGIPAPIIVQDIP----CIEKEQQLHASAQLTLECVNNSPEDRPT 238
G+ P ++Q++ + + QL C PEDRPT
Sbjct: 212 PGMTNPEVIQNLERGYRMVRPDNCPEELYQLMRLCWKERPEDRPT 256
>pdb|2F4J|A Chain A, Structure Of The Kinase Domain Of An Imatinib-Resistant
Abl Mutant In Complex With The Aurora Kinase Inhibitor
Vx-680
Length = 287
Score = 46.2 bits (108), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 34/145 (23%), Positives = 72/145 (49%), Gaps = 10/145 (6%)
Query: 25 QMSHNHILKRIGCCLQTPIPILVFQSVEYGTLRDCIFGA------PLPRLKIASDIVNSL 78
++ H ++++ +G C + P ++ + + YG L D + + L +A+ I +++
Sbjct: 66 EIKHPNLVQLLGVCTREPPFYIITEFMTYGNLLDYLRECNRQEVNAVVLLYMATQISSAM 125
Query: 79 AYLHFGFPRPIVLRNFKTQNILFNEENVAKWFDFLLSISIPEGETHITTDRVIGTRGYSA 138
YL + + R+ +N L E ++ K DF LS + G+T+ ++A
Sbjct: 126 EYLE---KKNFIHRDLAARNCLVGENHLVKVADFGLS-RLMTGDTYTAPAGAKFPIKWTA 181
Query: 139 PEYISICVLNEKSNVFSFGAFLFEL 163
PE ++ + KS+V++FG L+E+
Sbjct: 182 PESLAYNKFSIKSDVWAFGVLLWEI 206
>pdb|2G2F|A Chain A, A Src-Like Inactive Conformation In The Abl Tyrosine
Kinase Domain
pdb|2G2F|B Chain B, A Src-Like Inactive Conformation In The Abl Tyrosine
Kinase Domain
pdb|2G2H|A Chain A, A Src-Like Inactive Conformation In The Abl Tyrosine
Kinase Domain
pdb|2G2H|B Chain B, A Src-Like Inactive Conformation In The Abl Tyrosine
Kinase Domain
pdb|2G2I|A Chain A, A Src-Like Inactive Conformation In The Abl Tyrosine
Kinase Domain
pdb|2G2I|B Chain B, A Src-Like Inactive Conformation In The Abl Tyrosine
Kinase Domain
Length = 287
Score = 46.2 bits (108), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 34/145 (23%), Positives = 72/145 (49%), Gaps = 10/145 (6%)
Query: 25 QMSHNHILKRIGCCLQTPIPILVFQSVEYGTLRDCIFGA------PLPRLKIASDIVNSL 78
++ H ++++ +G C + P ++ + + YG L D + + L +A+ I +++
Sbjct: 67 EIKHPNLVQLLGVCTREPPFYIITEFMTYGNLLDYLRECNRQEVNAVVLLYMATQISSAM 126
Query: 79 AYLHFGFPRPIVLRNFKTQNILFNEENVAKWFDFLLSISIPEGETHITTDRVIGTRGYSA 138
YL + + R+ +N L E ++ K DF LS + G+T+ ++A
Sbjct: 127 EYLE---KKNFIHRDLAARNCLVGENHLVKVADFGLS-RLMTGDTYTAPAGAKFPIKWTA 182
Query: 139 PEYISICVLNEKSNVFSFGAFLFEL 163
PE ++ + KS+V++FG L+E+
Sbjct: 183 PESLAYNKFSIKSDVWAFGVLLWEI 207
>pdb|3KMM|A Chain A, Structure Of Human Lck Kinase With A Small Molecule
Inhibitor
Length = 288
Score = 46.2 bits (108), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 53/225 (23%), Positives = 90/225 (40%), Gaps = 43/225 (19%)
Query: 25 QMSHNHILKRIGCCLQTPIPILVFQSVEYGTLRDCIFGAPLPRLKI------ASDIVNSL 78
Q+ H +++ Q PI I+ + +E G+L D + +L I A+ I +
Sbjct: 73 QLQHQRLVRLYAVVTQEPIYIIT-EYMENGSLVDFLKTPSGIKLTINKLLDMAAQIAEGM 131
Query: 79 AYLHFGFPRPIVLRNFKTQNILFNEENVAKWFDFLLSISIPEGETHITTDRVIGTRGYSA 138
A++ R + R+ + NIL ++ K DF L+ I + E + ++A
Sbjct: 132 AFIE---ERNYIHRDLRAANILVSDTLSCKIADFGLARLIEDNEXTAREGAKFPIK-WTA 187
Query: 139 PEYISICVLNEKSNVFSFGAFLFELLA-GRIHIWDLLKDTHDHGCFFNEYLKNYLEDKRF 197
PE I+ KS+V+SFG L E++ GRI +
Sbjct: 188 PEAINYGTFTIKSDVWSFGILLTEIVTHGRIP---------------------------Y 220
Query: 198 TGIPAPIIVQDIP----CIEKEQQLHASAQLTLECVNNSPEDRPT 238
G+ P ++Q++ + + QL C PEDRPT
Sbjct: 221 PGMTNPEVIQNLERGYRMVRPDNCPEELYQLMRLCWKERPEDRPT 265
>pdb|3CD3|A Chain A, Crystal Structure Of Phosphorylated Human Feline Sarcoma
Viral Oncogene Homologue (V-Fes) In Complex With
Staurosporine And A Consensus Peptide
Length = 377
Score = 45.8 bits (107), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 36/140 (25%), Positives = 66/140 (47%), Gaps = 2/140 (1%)
Query: 25 QMSHNHILKRIGCCLQTPIPILVFQSVEYGTLRDCIF--GAPLPRLKIASDIVNSLAYLH 82
Q SH +I++ IG C Q +V + V+ G + GA L + + ++ A +
Sbjct: 168 QYSHPNIVRLIGVCTQKQPIYIVMELVQGGDFLTFLRTEGARLRVKTLLQMVGDAAAGME 227
Query: 83 FGFPRPIVLRNFKTQNILFNEENVAKWFDFLLSISIPEGETHITTDRVIGTRGYSAPEYI 142
+ + + R+ +N L E+NV K DF +S +G + ++APE +
Sbjct: 228 YLESKCCIHRDLAARNCLVTEKNVLKISDFGMSREEADGVXAASGGLRQVPVKWTAPEAL 287
Query: 143 SICVLNEKSNVFSFGAFLFE 162
+ + +S+V+SFG L+E
Sbjct: 288 NYGRYSSESDVWSFGILLWE 307
>pdb|3KXZ|A Chain A, The Complex Crystal Structure Of Lck With A Probe Molecule
W259
Length = 287
Score = 45.8 bits (107), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 53/225 (23%), Positives = 90/225 (40%), Gaps = 43/225 (19%)
Query: 25 QMSHNHILKRIGCCLQTPIPILVFQSVEYGTLRDCIFGAPLPRLKI------ASDIVNSL 78
Q+ H +++ Q PI I+ + +E G+L D + +L I A+ I +
Sbjct: 72 QLQHQRLVRLYAVVTQEPIYIIT-EYMENGSLVDFLKTPSGIKLTINKLLDMAAQIAEGM 130
Query: 79 AYLHFGFPRPIVLRNFKTQNILFNEENVAKWFDFLLSISIPEGETHITTDRVIGTRGYSA 138
A++ R + R+ + NIL ++ K DF L+ I + E + ++A
Sbjct: 131 AFIE---ERNYIHRDLRAANILVSDTLSCKIADFGLARLIEDNEXTAREGAKFPIK-WTA 186
Query: 139 PEYISICVLNEKSNVFSFGAFLFELLA-GRIHIWDLLKDTHDHGCFFNEYLKNYLEDKRF 197
PE I+ KS+V+SFG L E++ GRI +
Sbjct: 187 PEAINYGTFTIKSDVWSFGILLTEIVTHGRIP---------------------------Y 219
Query: 198 TGIPAPIIVQDIP----CIEKEQQLHASAQLTLECVNNSPEDRPT 238
G+ P ++Q++ + + QL C PEDRPT
Sbjct: 220 PGMTNPEVIQNLERGYRMVRPDNCPEELYQLMRLCWKERPEDRPT 264
>pdb|2ZM1|A Chain A, Crystal Structure Of Imidazo Pyrazin 1 Bound To The Kinase
Domain Of Human Lck, (Auto-Phosphorylated On Tyr394)
pdb|2ZM4|A Chain A, Crystal Structure Of Imidazo Quinoxaline 1 Bound To The
Kinase Domain Of Human Lck, Activated Form (Auto-
Phosphorylated On Tyr394)
pdb|2ZYB|A Chain A, Crystal Structure Of Phenylimidazo Pyrazin 2 Bound To The
Kinase Domain Of Human Lck, (Auto-Phosphorylated On
Tyr394)
pdb|3AC1|A Chain A, Crystal Structure Of Pyrazin Derivative Bound To The
Kinase Domain Of Human Lck, (Auto-Phosphorylated On
Tyr394)
pdb|3AC2|A Chain A, Crystal Structure Of Pyrazolo Pyrimidine Derivative Bound
To The Kinase Domain Of Human Lck, (Auto-Phosphorylated
On Tyr394)
pdb|3AC3|A Chain A, Crystal Structure Of Pyrazolo Pyrimidine Derivative Bound
To The Kinase Domain Of Human Lck, (Auto-Phosphorylated
On Tyr394)
pdb|3AC4|A Chain A, Crystal Structure Of Triazolo Pyrimidine Derivative Bound
To The Kinase Domain Of Human Lck, (Auto-Phosphorylated
On Tyr394)
pdb|3AC5|A Chain A, Crystal Structure Of Triazolo Pyrimidine Derivative Bound
To The Kinase Domain Of Human Lck, (Auto-Phosphorylated
On Tyr394)
pdb|3AC8|A Chain A, Crystal Structure Of Pyrazolo Pyrimidine Derivative Bound
To The Kinase Domain Of Human Lck, (Auto-Phosphorylated
On Tyr394)
pdb|3ACJ|A Chain A, Crystal Structure Of Imidazo Pyrimidine Derivative Bound
To The Kinase Domain Of Human Lck, (Auto-Phosphorylated
On Tyr394)
pdb|3ACK|A Chain A, Crystal Structure Of Pyrrolo Pyrazine Derivative Bound To
The Kinase Domain Of Human Lck, (Auto-Phosphorylated On
Tyr394)
pdb|3AD4|A Chain A, Crystal Structure Of Methoxy Benzofuran Derivative Bound
To The Kinase Domain Of Human Lck, (Auto-Phosphorylated
On Tyr394)
pdb|3AD5|A Chain A, Crystal Structure Of Triazolone Derivative Bound To The
Kinase Domain Of Human Lck, (Auto-Phosphorylated On
Tyr394)
pdb|3AD6|A Chain A, Crystal Structure Of Pyrazolo Pyrimidine Derivative Bound
To The Kinase Domain Of Human Lck, (Auto-Phosphorylated
On Tyr394)
Length = 285
Score = 45.8 bits (107), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 53/225 (23%), Positives = 90/225 (40%), Gaps = 43/225 (19%)
Query: 25 QMSHNHILKRIGCCLQTPIPILVFQSVEYGTLRDCIFGAPLPRLKI------ASDIVNSL 78
Q+ H +++ Q PI I+ + +E G+L D + +L I A+ I +
Sbjct: 70 QLQHQRLVRLYAVVTQEPIYIIT-EYMENGSLVDFLKTPSGIKLTINKLLDMAAQIAEGM 128
Query: 79 AYLHFGFPRPIVLRNFKTQNILFNEENVAKWFDFLLSISIPEGETHITTDRVIGTRGYSA 138
A++ R + R+ + NIL ++ K DF L+ I + E + ++A
Sbjct: 129 AFIE---ERNYIHRDLRAANILVSDTLSCKIADFGLARLIEDNEXTAREGAKFPIK-WTA 184
Query: 139 PEYISICVLNEKSNVFSFGAFLFELLA-GRIHIWDLLKDTHDHGCFFNEYLKNYLEDKRF 197
PE I+ KS+V+SFG L E++ GRI +
Sbjct: 185 PEAINYGTFTIKSDVWSFGILLTEIVTHGRIP---------------------------Y 217
Query: 198 TGIPAPIIVQDIP----CIEKEQQLHASAQLTLECVNNSPEDRPT 238
G+ P ++Q++ + + QL C PEDRPT
Sbjct: 218 PGMTNPEVIQNLERGYRMVRPDNCPEELYQLMRLCWKERPEDRPT 262
>pdb|2HZ0|A Chain A, Abl Kinase Domain In Complex With Nvp-Aeg082
pdb|2HZ0|B Chain B, Abl Kinase Domain In Complex With Nvp-Aeg082
Length = 270
Score = 45.8 bits (107), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 34/145 (23%), Positives = 72/145 (49%), Gaps = 10/145 (6%)
Query: 25 QMSHNHILKRIGCCLQTPIPILVFQSVEYGTLRDCIFGA------PLPRLKIASDIVNSL 78
++ H ++++ +G C + P ++ + + YG L D + + L +A+ I +++
Sbjct: 65 EIKHPNLVQLLGVCTREPPFYIITEFMTYGNLLDYLRECNRQEVNAVVLLYMATQISSAM 124
Query: 79 AYLHFGFPRPIVLRNFKTQNILFNEENVAKWFDFLLSISIPEGETHITTDRVIGTRGYSA 138
YL + + R+ +N L E ++ K DF LS + G+T+ ++A
Sbjct: 125 EYLE---KKNFIHRDLAARNCLVGENHLVKVADFGLS-RLMTGDTYTAHAGAKFPIKWTA 180
Query: 139 PEYISICVLNEKSNVFSFGAFLFEL 163
PE ++ + KS+V++FG L+E+
Sbjct: 181 PESLAYNKFSIKSDVWAFGVLLWEI 205
>pdb|2HZI|A Chain A, Abl Kinase Domain In Complex With Pd180970
pdb|2HZI|B Chain B, Abl Kinase Domain In Complex With Pd180970
pdb|3CS9|A Chain A, Human Abl Kinase In Complex With Nilotinib
pdb|3CS9|B Chain B, Human Abl Kinase In Complex With Nilotinib
pdb|3CS9|C Chain C, Human Abl Kinase In Complex With Nilotinib
pdb|3CS9|D Chain D, Human Abl Kinase In Complex With Nilotinib
Length = 277
Score = 45.8 bits (107), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 34/145 (23%), Positives = 72/145 (49%), Gaps = 10/145 (6%)
Query: 25 QMSHNHILKRIGCCLQTPIPILVFQSVEYGTLRDCIFGA------PLPRLKIASDIVNSL 78
++ H ++++ +G C + P ++ + + YG L D + + L +A+ I +++
Sbjct: 69 EIKHPNLVQLLGVCTREPPFYIITEFMTYGNLLDYLRECNRQEVNAVVLLYMATQISSAM 128
Query: 79 AYLHFGFPRPIVLRNFKTQNILFNEENVAKWFDFLLSISIPEGETHITTDRVIGTRGYSA 138
YL + + R+ +N L E ++ K DF LS + G+T+ ++A
Sbjct: 129 EYLE---KKNFIHRDLAARNCLVGENHLVKVADFGLS-RLMTGDTYTAHAGAKFPIKWTA 184
Query: 139 PEYISICVLNEKSNVFSFGAFLFEL 163
PE ++ + KS+V++FG L+E+
Sbjct: 185 PESLAYNKFSIKSDVWAFGVLLWEI 209
>pdb|2QLU|A Chain A, Crystal Structure Of Activin Receptor Type Ii Kinase
Domain From Human
Length = 314
Score = 45.8 bits (107), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 30/109 (27%), Positives = 54/109 (49%), Gaps = 13/109 (11%)
Query: 70 IASDIVNSLAYLHFGFP-------RP-IVLRNFKTQNILFNEENVAKWFDFLLSISIPEG 121
+A + L+YLH P +P I R+FK++N+L + A DF L++ G
Sbjct: 117 VAETMSRGLSYLHEDVPWCRGEGHKPSIAHRDFKSKNVLLKSDLTAVLADFGLAVRFEPG 176
Query: 122 ETHITTDRVIGTRGYSAPEYISICVLNEKS-----NVFSFGAFLFELLA 165
+ T +GTR Y APE + + ++ ++++ G L+EL++
Sbjct: 177 KPPGDTHGQVGTRRYMAPEVLEGAINFQRDAFLRIDMYAMGLVLWELVS 225
>pdb|2HYY|A Chain A, Human Abl Kinase Domain In Complex With Imatinib (Sti571,
Glivec)
pdb|2HYY|B Chain B, Human Abl Kinase Domain In Complex With Imatinib (Sti571,
Glivec)
pdb|2HYY|C Chain C, Human Abl Kinase Domain In Complex With Imatinib (Sti571,
Glivec)
pdb|2HYY|D Chain D, Human Abl Kinase Domain In Complex With Imatinib (Sti571,
Glivec)
pdb|2HZ4|A Chain A, Abl Kinase Domain Unligated And In Complex With
Tetrahydrostaurosporine
pdb|2HZ4|B Chain B, Abl Kinase Domain Unligated And In Complex With
Tetrahydrostaurosporine
pdb|2HZ4|C Chain C, Abl Kinase Domain Unligated And In Complex With
Tetrahydrostaurosporine
Length = 273
Score = 45.8 bits (107), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 34/145 (23%), Positives = 72/145 (49%), Gaps = 10/145 (6%)
Query: 25 QMSHNHILKRIGCCLQTPIPILVFQSVEYGTLRDCIFGA------PLPRLKIASDIVNSL 78
++ H ++++ +G C + P ++ + + YG L D + + L +A+ I +++
Sbjct: 65 EIKHPNLVQLLGVCTREPPFYIITEFMTYGNLLDYLRECNRQEVNAVVLLYMATQISSAM 124
Query: 79 AYLHFGFPRPIVLRNFKTQNILFNEENVAKWFDFLLSISIPEGETHITTDRVIGTRGYSA 138
YL + + R+ +N L E ++ K DF LS + G+T+ ++A
Sbjct: 125 EYLE---KKNFIHRDLAARNCLVGENHLVKVADFGLS-RLMTGDTYTAHAGAKFPIKWTA 180
Query: 139 PEYISICVLNEKSNVFSFGAFLFEL 163
PE ++ + KS+V++FG L+E+
Sbjct: 181 PESLAYNKFSIKSDVWAFGVLLWEI 205
>pdb|3BYS|A Chain A, Co-Crystal Structure Of Lck And Aminopyrimidine Amide 10b
pdb|3BYU|A Chain A, Co-Crystal Structure Of Lck And Aminopyrimidine Reverse
Amide 23
Length = 277
Score = 45.8 bits (107), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 53/225 (23%), Positives = 91/225 (40%), Gaps = 43/225 (19%)
Query: 25 QMSHNHILKRIGCCLQTPIPILVFQSVEYGTLRDCIFGAPLPRLKI------ASDIVNSL 78
Q+ H +++ Q PI I+ + +E G+L D + +L I A+ I +
Sbjct: 70 QLQHQRLVRLYAVVTQEPIYIIT-EYMENGSLVDFLKTPSGIKLTINKLLDMAAQIAEGM 128
Query: 79 AYLHFGFPRPIVLRNFKTQNILFNEENVAKWFDFLLSISIPEGETHITTDRVIGTRGYSA 138
A++ R + R+ + NIL ++ K DF L+ I + E + + ++A
Sbjct: 129 AFIE---ERNYIHRDLRAANILVSDTLSCKIADFGLARLIEDNE-YTAREGAKFPIKWTA 184
Query: 139 PEYISICVLNEKSNVFSFGAFLFELLA-GRIHIWDLLKDTHDHGCFFNEYLKNYLEDKRF 197
PE I+ KS+V+SFG L E++ GRI +
Sbjct: 185 PEAINYGTFTIKSDVWSFGILLTEIVTHGRIP---------------------------Y 217
Query: 198 TGIPAPIIVQDIP----CIEKEQQLHASAQLTLECVNNSPEDRPT 238
G+ P ++Q++ + + QL C PEDRPT
Sbjct: 218 PGMTNPEVIQNLERGYRMVRPDNCPEELYQLMRLCWKERPEDRPT 262
>pdb|2OFV|A Chain A, Crystal Structure Of Aminoquinazoline 1 Bound To Lck
pdb|2OFV|B Chain B, Crystal Structure Of Aminoquinazoline 1 Bound To Lck
pdb|3B2W|A Chain A, Crystal Structure Of Pyrimidine Amide 11 Bound To Lck
Length = 277
Score = 45.8 bits (107), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 53/225 (23%), Positives = 91/225 (40%), Gaps = 43/225 (19%)
Query: 25 QMSHNHILKRIGCCLQTPIPILVFQSVEYGTLRDCIFGAPLPRLKI------ASDIVNSL 78
Q+ H +++ Q PI I+ + +E G+L D + +L I A+ I +
Sbjct: 69 QLQHQRLVRLYAVVTQEPIYIIT-EYMENGSLVDFLKTPSGIKLTINKLLDMAAQIAEGM 127
Query: 79 AYLHFGFPRPIVLRNFKTQNILFNEENVAKWFDFLLSISIPEGETHITTDRVIGTRGYSA 138
A++ R + R+ + NIL ++ K DF L+ I + E + + ++A
Sbjct: 128 AFIE---ERNYIHRDLRAANILVSDTLSCKIADFGLARLIEDNE-YTAREGAKFPIKWTA 183
Query: 139 PEYISICVLNEKSNVFSFGAFLFELLA-GRIHIWDLLKDTHDHGCFFNEYLKNYLEDKRF 197
PE I+ KS+V+SFG L E++ GRI +
Sbjct: 184 PEAINYGTFTIKSDVWSFGILLTEIVTHGRIP---------------------------Y 216
Query: 198 TGIPAPIIVQDIP----CIEKEQQLHASAQLTLECVNNSPEDRPT 238
G+ P ++Q++ + + QL C PEDRPT
Sbjct: 217 PGMTNPEVIQNLERGYRMVRPDNCPEELYQLMRLCWKERPEDRPT 261
>pdb|2HIW|A Chain A, Crystal Structure Of Inactive Conformation Abl Kinase
Catalytic Domain Complexed With Type Ii Inhibitor
pdb|2HIW|B Chain B, Crystal Structure Of Inactive Conformation Abl Kinase
Catalytic Domain Complexed With Type Ii Inhibitor
Length = 287
Score = 45.8 bits (107), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 34/145 (23%), Positives = 72/145 (49%), Gaps = 10/145 (6%)
Query: 25 QMSHNHILKRIGCCLQTPIPILVFQSVEYGTLRDCIFGA------PLPRLKIASDIVNSL 78
++ H ++++ +G C + P ++ + + YG L D + + L +A+ I +++
Sbjct: 67 EIKHPNLVQLLGVCTREPPFYIITEFMTYGNLLDYLRECNRQEVNAVVLLYMATQISSAM 126
Query: 79 AYLHFGFPRPIVLRNFKTQNILFNEENVAKWFDFLLSISIPEGETHITTDRVIGTRGYSA 138
YL + + R+ +N L E ++ K DF LS + G+T+ ++A
Sbjct: 127 EYLE---KKNFIHRDLAARNCLVGENHLVKVADFGLS-RLMTGDTYTAHAGAKFPIKWTA 182
Query: 139 PEYISICVLNEKSNVFSFGAFLFEL 163
PE ++ + KS+V++FG L+E+
Sbjct: 183 PESLAYNKFSIKSDVWAFGVLLWEI 207
>pdb|3PYY|A Chain A, Discovery And Characterization Of A Cell-Permeable,
Small-Molecule C- Abl Kinase Activator That Binds To The
Myristoyl Binding Site
pdb|3PYY|B Chain B, Discovery And Characterization Of A Cell-Permeable,
Small-Molecule C- Abl Kinase Activator That Binds To The
Myristoyl Binding Site
Length = 298
Score = 45.8 bits (107), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 34/145 (23%), Positives = 72/145 (49%), Gaps = 10/145 (6%)
Query: 25 QMSHNHILKRIGCCLQTPIPILVFQSVEYGTLRDCIFGA------PLPRLKIASDIVNSL 78
++ H ++++ +G C + P ++ + + YG L D + + L +A+ I +++
Sbjct: 78 EIKHPNLVQLLGVCTREPPFYIITEFMTYGNLLDYLRECNRQEVNAVVLLYMATQISSAM 137
Query: 79 AYLHFGFPRPIVLRNFKTQNILFNEENVAKWFDFLLSISIPEGETHITTDRVIGTRGYSA 138
YL + + R+ +N L E ++ K DF LS + G+T+ ++A
Sbjct: 138 EYLE---KKNFIHRDLAARNCLVGENHLVKVADFGLS-RLMTGDTYTAHAGAKFPIKWTA 193
Query: 139 PEYISICVLNEKSNVFSFGAFLFEL 163
PE ++ + KS+V++FG L+E+
Sbjct: 194 PESLAYNKFSIKSDVWAFGVLLWEI 218
>pdb|3QRI|A Chain A, The Crystal Structure Of Human Abl1 Kinase Domain In
Complex With Dcc- 2036
pdb|3QRI|B Chain B, The Crystal Structure Of Human Abl1 Kinase Domain In
Complex With Dcc- 2036
pdb|3QRK|A Chain A, The Crystal Structure Of Human Abl1 Kinase Domain In
Complex With Dp- 987
Length = 277
Score = 45.8 bits (107), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 34/145 (23%), Positives = 72/145 (49%), Gaps = 10/145 (6%)
Query: 25 QMSHNHILKRIGCCLQTPIPILVFQSVEYGTLRDCIFGA------PLPRLKIASDIVNSL 78
++ H ++++ +G C + P ++ + + YG L D + + L +A+ I +++
Sbjct: 70 EIKHPNLVQLLGVCTREPPFYIITEFMTYGNLLDYLRECNRQEVNAVVLLYMATQISSAM 129
Query: 79 AYLHFGFPRPIVLRNFKTQNILFNEENVAKWFDFLLSISIPEGETHITTDRVIGTRGYSA 138
YL + + R+ +N L E ++ K DF LS + G+T+ ++A
Sbjct: 130 EYLE---KKNFIHRDLAARNCLVGENHLVKVADFGLS-RLMTGDTYTAHAGAKFPIKWTA 185
Query: 139 PEYISICVLNEKSNVFSFGAFLFEL 163
PE ++ + KS+V++FG L+E+
Sbjct: 186 PESLAYNKFSIKSDVWAFGVLLWEI 210
>pdb|2G1T|A Chain A, A Src-Like Inactive Conformation In The Abl Tyrosine
Kinase Domain
pdb|2G1T|B Chain B, A Src-Like Inactive Conformation In The Abl Tyrosine
Kinase Domain
pdb|2G1T|C Chain C, A Src-Like Inactive Conformation In The Abl Tyrosine
Kinase Domain
pdb|2G1T|D Chain D, A Src-Like Inactive Conformation In The Abl Tyrosine
Kinase Domain
pdb|3UE4|A Chain A, Structural And Spectroscopic Analysis Of The Kinase
Inhibitor Bosutinib Binding To The Abl Tyrosine Kinase
Domain
pdb|3UE4|B Chain B, Structural And Spectroscopic Analysis Of The Kinase
Inhibitor Bosutinib Binding To The Abl Tyrosine Kinase
Domain
Length = 287
Score = 45.8 bits (107), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 34/145 (23%), Positives = 72/145 (49%), Gaps = 10/145 (6%)
Query: 25 QMSHNHILKRIGCCLQTPIPILVFQSVEYGTLRDCIFGA------PLPRLKIASDIVNSL 78
++ H ++++ +G C + P ++ + + YG L D + + L +A+ I +++
Sbjct: 67 EIKHPNLVQLLGVCTREPPFYIITEFMTYGNLLDYLRECNRQEVNAVVLLYMATQISSAM 126
Query: 79 AYLHFGFPRPIVLRNFKTQNILFNEENVAKWFDFLLSISIPEGETHITTDRVIGTRGYSA 138
YL + + R+ +N L E ++ K DF LS + G+T+ ++A
Sbjct: 127 EYLE---KKNFIHRDLAARNCLVGENHLVKVADFGLS-RLMTGDTYTAHAGAKFPIKWTA 182
Query: 139 PEYISICVLNEKSNVFSFGAFLFEL 163
PE ++ + KS+V++FG L+E+
Sbjct: 183 PESLAYNKFSIKSDVWAFGVLLWEI 207
>pdb|3Q4T|A Chain A, Crystal Structure Of Activin Receptor Type-Iia (Acvr2a)
Kinase Domain In Complex With Dorsomorphin
pdb|3Q4T|B Chain B, Crystal Structure Of Activin Receptor Type-Iia (Acvr2a)
Kinase Domain In Complex With Dorsomorphin
pdb|3SOC|A Chain A, Crystal Structure Of Activin Receptor Type-Iia (Acvr2a)
Kinase Domain In Complex With A Quinazolin
pdb|3SOC|B Chain B, Crystal Structure Of Activin Receptor Type-Iia (Acvr2a)
Kinase Domain In Complex With A Quinazolin
pdb|4ASX|A Chain A, Crystal Structure Of Activin Receptor Type-Iia (Acvr2a)
Kinase Domain In Complex With Dihydro-Bauerine C
pdb|4ASX|B Chain B, Crystal Structure Of Activin Receptor Type-Iia (Acvr2a)
Kinase Domain In Complex With Dihydro-Bauerine C
Length = 322
Score = 45.8 bits (107), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 42/157 (26%), Positives = 73/157 (46%), Gaps = 19/157 (12%)
Query: 26 MSHNHILKRIGCCLQ-TPIPI---LVFQSVEYGTLRDCIFGAPLPRLK---IASDIVNSL 78
M H +IL+ IG + T + + L+ E G+L D + + + IA + L
Sbjct: 75 MKHENILQFIGAEKRGTSVDVDLWLITAFHEKGSLSDFLKANVVSWNELCHIAETMARGL 134
Query: 79 AYLHFGFP------RPIVL-RNFKTQNILFNEENVAKWFDFLLSISIPEGETHITTDRVI 131
AYLH P +P + R+ K++N+L A DF L++ G++ T +
Sbjct: 135 AYLHEDIPGLKDGHKPAISHRDIKSKNVLLKNNLTACIADFGLALKFEAGKSAGDTHGQV 194
Query: 132 GTRGYSAPEYISICVLNEKS-----NVFSFGAFLFEL 163
GTR Y APE + + ++ ++++ G L+EL
Sbjct: 195 GTRRYMAPEVLEGAINFQRDAFLRIDMYAMGLVLWEL 231
>pdb|2PL0|A Chain A, Lck Bound To Imatinib
Length = 289
Score = 45.8 bits (107), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 53/225 (23%), Positives = 91/225 (40%), Gaps = 43/225 (19%)
Query: 25 QMSHNHILKRIGCCLQTPIPILVFQSVEYGTLRDCIFGAPLPRLKI------ASDIVNSL 78
Q+ H +++ Q PI I+ + +E G+L D + +L I A+ I +
Sbjct: 74 QLQHQRLVRLYAVVTQEPIYIIT-EYMENGSLVDFLKTPSGIKLTINKLLDMAAQIAEGM 132
Query: 79 AYLHFGFPRPIVLRNFKTQNILFNEENVAKWFDFLLSISIPEGETHITTDRVIGTRGYSA 138
A++ R + R+ + NIL ++ K DF L+ I + E + + ++A
Sbjct: 133 AFIE---ERNYIHRDLRAANILVSDTLSCKIADFGLARLIEDNE-YTAREGAKFPIKWTA 188
Query: 139 PEYISICVLNEKSNVFSFGAFLFELLA-GRIHIWDLLKDTHDHGCFFNEYLKNYLEDKRF 197
PE I+ KS+V+SFG L E++ GRI +
Sbjct: 189 PEAINYGTFTIKSDVWSFGILLTEIVTHGRIP---------------------------Y 221
Query: 198 TGIPAPIIVQDIP----CIEKEQQLHASAQLTLECVNNSPEDRPT 238
G+ P ++Q++ + + QL C PEDRPT
Sbjct: 222 PGMTNPEVIQNLERGYRMVRPDNCPEELYQLMRLCWKERPEDRPT 266
>pdb|2E2B|A Chain A, Crystal Structure Of The C-Abl Kinase Domain In Complex
With Inno-406
pdb|2E2B|B Chain B, Crystal Structure Of The C-Abl Kinase Domain In Complex
With Inno-406
Length = 293
Score = 45.4 bits (106), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 34/145 (23%), Positives = 72/145 (49%), Gaps = 10/145 (6%)
Query: 25 QMSHNHILKRIGCCLQTPIPILVFQSVEYGTLRDCIFGA------PLPRLKIASDIVNSL 78
++ H ++++ +G C + P ++ + + YG L D + + L +A+ I +++
Sbjct: 70 EIKHPNLVQLLGVCTREPPFYIITEFMTYGNLLDYLRECNRQEVNAVVLLYMATQISSAM 129
Query: 79 AYLHFGFPRPIVLRNFKTQNILFNEENVAKWFDFLLSISIPEGETHITTDRVIGTRGYSA 138
YL + + R+ +N L E ++ K DF LS + G+T+ ++A
Sbjct: 130 EYLE---KKNFIHRDLAARNCLVGENHLVKVADFGLS-RLMTGDTYTAHAGAKFPIKWTA 185
Query: 139 PEYISICVLNEKSNVFSFGAFLFEL 163
PE ++ + KS+V++FG L+E+
Sbjct: 186 PESLAYNKFSIKSDVWAFGVLLWEI 210
>pdb|3UNZ|A Chain A, Aurora A In Complex With Rpm1679
pdb|3UNZ|B Chain B, Aurora A In Complex With Rpm1679
pdb|3UO4|A Chain A, Aurora A In Complex With Rpm1680
pdb|3UO5|A Chain A, Aurora A In Complex With Yl1-038-31
pdb|3UO6|A Chain A, Aurora A In Complex With Yl5-083
pdb|3UO6|B Chain B, Aurora A In Complex With Yl5-083
pdb|3UOD|A Chain A, Aurora A In Complex With Rpm1693
pdb|3UOH|A Chain A, Aurora A In Complex With Rpm1722
pdb|3UOH|B Chain B, Aurora A In Complex With Rpm1722
pdb|3UOJ|A Chain A, Aurora A In Complex With Rpm1715
pdb|3UOJ|B Chain B, Aurora A In Complex With Rpm1715
pdb|3UOK|A Chain A, Aurora A In Complex With Yl5-81-1
pdb|3UOK|B Chain B, Aurora A In Complex With Yl5-81-1
pdb|3UOL|A Chain A, Aurora A In Complex With So2-162
pdb|3UOL|B Chain B, Aurora A In Complex With So2-162
pdb|3UP2|A Chain A, Aurora A In Complex With Rpm1686
pdb|3UP7|A Chain A, Aurora A In Complex With Yl1-038-09
pdb|4DEA|A Chain A, Aurora A In Complex With Yl1-038-18
pdb|4DEB|A Chain A, Aurora A In Complex With Rk2-17-01
pdb|4DED|A Chain A, Aurora A In Complex With Yl1-038-21
pdb|4DEE|A Chain A, Aurora A In Complex With Adp
Length = 279
Score = 45.4 bits (106), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 27/96 (28%), Positives = 47/96 (48%), Gaps = 7/96 (7%)
Query: 72 SDIVNSLAYLHFGFPRPIVLRNFKTQNILFNEENVAKWFDFLLSISIPEGETHITTDRVI 131
+++ N+L+Y H + ++ R+ K +N+L K DF S+ P D +
Sbjct: 116 TELANALSYCH---SKRVIHRDIKPENLLLGSAGELKIADFGWSVHAPSSRR----DTLC 168
Query: 132 GTRGYSAPEYISICVLNEKSNVFSFGAFLFELLAGR 167
GT Y PE I + +EK +++S G +E L G+
Sbjct: 169 GTLDYLPPEMIEGRMHDEKVDLWSLGVLCYEFLVGK 204
>pdb|3R21|A Chain A, Design, Synthesis, And Biological Evaluation Of
Pyrazolopyridine- Sulfonamides As Potent
Multiple-Mitotic Kinase (Mmk) Inhibitors (Part I)
pdb|3R22|A Chain A, Design, Synthesis, And Biological Evaluation Of
Pyrazolopyridine- Sulfonamides As Potent
Multiple-Mitotic Kinase (Mmk) Inhibitors (Part I)
pdb|4DHF|A Chain A, Structure Of Aurora A Mutant Bound To Biogenidec Cpd 15
pdb|4DHF|B Chain B, Structure Of Aurora A Mutant Bound To Biogenidec Cpd 15
Length = 271
Score = 45.4 bits (106), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 27/96 (28%), Positives = 47/96 (48%), Gaps = 7/96 (7%)
Query: 72 SDIVNSLAYLHFGFPRPIVLRNFKTQNILFNEENVAKWFDFLLSISIPEGETHITTDRVI 131
+++ N+L+Y H + ++ R+ K +N+L K DF S+ P D +
Sbjct: 118 TELANALSYCH---SKRVIHRDIKPENLLLGSAGELKIADFGWSVHAPSSRR----DDLC 170
Query: 132 GTRGYSAPEYISICVLNEKSNVFSFGAFLFELLAGR 167
GT Y PE I + +EK +++S G +E L G+
Sbjct: 171 GTLDYLPPEMIEGRMHDEKVDLWSLGVLCYEFLVGK 206
>pdb|3DK6|A Chain A, Crystal Structure Of Mutant Abl Kinase Domain In Complex
With Small Molecule Fragment
pdb|3DK6|B Chain B, Crystal Structure Of Mutant Abl Kinase Domain In Complex
With Small Molecule Fragment
Length = 293
Score = 45.4 bits (106), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 34/145 (23%), Positives = 72/145 (49%), Gaps = 10/145 (6%)
Query: 25 QMSHNHILKRIGCCLQTPIPILVFQSVEYGTLRDCIFG------APLPRLKIASDIVNSL 78
++ H ++++ +G C + P ++ + + YG L D + + + L +A+ I +++
Sbjct: 63 EIKHPNLVQLLGVCTREPPFYIITEFMTYGNLLDYLRECNRQEVSAVVLLYMATQISSAM 122
Query: 79 AYLHFGFPRPIVLRNFKTQNILFNEENVAKWFDFLLSISIPEGETHITTDRVIGTRGYSA 138
YL + + R+ +N L E ++ K DF LS + G+T ++A
Sbjct: 123 EYLE---KKNFIHRDLAARNCLVGENHLVKVADFGLS-RLMTGDTXTAHAGAKFPIKWTA 178
Query: 139 PEYISICVLNEKSNVFSFGAFLFEL 163
PE ++ + KS+V++FG L+E+
Sbjct: 179 PESLAYNKFSIKSDVWAFGVLLWEI 203
>pdb|3BKB|A Chain A, Crystal Structure Of Human Feline Sarcoma Viral Oncogene
Homologue (V- Fes)
pdb|3CBL|A Chain A, Crystal Structure Of Human Feline Sarcoma Viral Oncogene
Homologue (v- Fes) In Complex With Staurosporine And A
Consensus Peptide
pdb|4E93|A Chain A, Crystal Structure Of Human Feline Sarcoma Viral Oncogene
Homologue (V- Fes)in Complex With Tae684
Length = 377
Score = 45.4 bits (106), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 36/140 (25%), Positives = 66/140 (47%), Gaps = 2/140 (1%)
Query: 25 QMSHNHILKRIGCCLQTPIPILVFQSVEYGTLRDCIF--GAPLPRLKIASDIVNSLAYLH 82
Q SH +I++ IG C Q +V + V+ G + GA L + + ++ A +
Sbjct: 168 QYSHPNIVRLIGVCTQKQPIYIVMELVQGGDFLTFLRTEGARLRVKTLLQMVGDAAAGME 227
Query: 83 FGFPRPIVLRNFKTQNILFNEENVAKWFDFLLSISIPEGETHITTDRVIGTRGYSAPEYI 142
+ + + R+ +N L E+NV K DF +S +G + ++APE +
Sbjct: 228 YLESKCCIHRDLAARNCLVTEKNVLKISDFGMSREEADGVYAASGGLRQVPVKWTAPEAL 287
Query: 143 SICVLNEKSNVFSFGAFLFE 162
+ + +S+V+SFG L+E
Sbjct: 288 NYGRYSSESDVWSFGILLWE 307
>pdb|3Q4Z|A Chain A, Structure Of Unphosphorylated Pak1 Kinase Domain
pdb|3Q4Z|B Chain B, Structure Of Unphosphorylated Pak1 Kinase Domain
Length = 306
Score = 45.4 bits (106), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 30/121 (24%), Positives = 55/121 (45%), Gaps = 2/121 (1%)
Query: 46 LVFQSVEYGTLRDCIFGAPLPRLKIASDIVNSLAYLHFGFPRPIVLRNFKTQNILFNEEN 105
+V + + G+L D + + +IA+ L L F ++ RN K+ NIL +
Sbjct: 95 VVMEYLAGGSLTDVVTETCMDEGQIAAVCRECLQALEFLHSNQVIHRNIKSDNILLGMDG 154
Query: 106 VAKWFDFLLSISIPEGETHITTDRVIGTRGYSAPEYISICVLNEKSNVFSFGAFLFELLA 165
K DF I ++ +T ++GT + APE ++ K +++S G E++
Sbjct: 155 SVKLTDFGFCAQITPEQSKRST--MVGTPYWMAPEVVTRKAYGPKVDIWSLGIMAIEMIE 212
Query: 166 G 166
G
Sbjct: 213 G 213
>pdb|2V7A|A Chain A, Crystal Structure Of The T315i Abl Mutant In Complex With
The Inhibitor Pha-739358
pdb|2V7A|B Chain B, Crystal Structure Of The T315i Abl Mutant In Complex With
The Inhibitor Pha-739358
Length = 286
Score = 45.4 bits (106), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 34/145 (23%), Positives = 71/145 (48%), Gaps = 10/145 (6%)
Query: 25 QMSHNHILKRIGCCLQTPIPILVFQSVEYGTLRDCIFGA------PLPRLKIASDIVNSL 78
++ H ++++ +G C + P ++ + + YG L D + + L +A+ I +++
Sbjct: 66 EIKHPNLVQLLGVCTREPPFYIIIEFMTYGNLLDYLRECNRQEVNAVVLLYMATQISSAM 125
Query: 79 AYLHFGFPRPIVLRNFKTQNILFNEENVAKWFDFLLSISIPEGETHITTDRVIGTRGYSA 138
YL + + R+ +N L E ++ K DF LS + G+T ++A
Sbjct: 126 EYLE---KKNFIHRDLAARNCLVGENHLVKVADFGLS-RLMTGDTXTAHAGAKFPIKWTA 181
Query: 139 PEYISICVLNEKSNVFSFGAFLFEL 163
PE ++ + KS+V++FG L+E+
Sbjct: 182 PESLAYNKFSIKSDVWAFGVLLWEI 206
>pdb|2BMC|A Chain A, Aurora-2 T287d T288d Complexed With Pha-680632
pdb|2BMC|B Chain B, Aurora-2 T287d T288d Complexed With Pha-680632
pdb|2BMC|C Chain C, Aurora-2 T287d T288d Complexed With Pha-680632
pdb|2BMC|D Chain D, Aurora-2 T287d T288d Complexed With Pha-680632
pdb|2BMC|E Chain E, Aurora-2 T287d T288d Complexed With Pha-680632
pdb|2BMC|F Chain F, Aurora-2 T287d T288d Complexed With Pha-680632
Length = 306
Score = 45.1 bits (105), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 27/96 (28%), Positives = 47/96 (48%), Gaps = 7/96 (7%)
Query: 72 SDIVNSLAYLHFGFPRPIVLRNFKTQNILFNEENVAKWFDFLLSISIPEGETHITTDRVI 131
+++ N+L+Y H + ++ R+ K +N+L K DF S+ P D +
Sbjct: 141 TELANALSYCH---SKRVIHRDIKPENLLLGSAGELKIADFGWSVHAPSSRR----DDLC 193
Query: 132 GTRGYSAPEYISICVLNEKSNVFSFGAFLFELLAGR 167
GT Y PE I + +EK +++S G +E L G+
Sbjct: 194 GTLDYLPPEMIEGRMHDEKVDLWSLGVLCYEFLVGK 229
>pdb|3DK3|A Chain A, Crystal Structure Of Mutant Abl Kinase Domain In Complex
With Small Molecule Fragment
pdb|3DK3|B Chain B, Crystal Structure Of Mutant Abl Kinase Domain In Complex
With Small Molecule Fragment
Length = 293
Score = 45.1 bits (105), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 34/145 (23%), Positives = 72/145 (49%), Gaps = 10/145 (6%)
Query: 25 QMSHNHILKRIGCCLQTPIPILVFQSVEYGTLRDCIFG------APLPRLKIASDIVNSL 78
++ H ++++ +G C + P ++ + + YG L D + + + L +A+ I +++
Sbjct: 63 EIKHPNLVQLLGVCTREPPFYIITEFMTYGNLLDYLRECNRQEVSAVVLLYMATQISSAM 122
Query: 79 AYLHFGFPRPIVLRNFKTQNILFNEENVAKWFDFLLSISIPEGETHITTDRVIGTRGYSA 138
YL + + R+ +N L E ++ K DF LS + G+T ++A
Sbjct: 123 EYLE---KKNFIHRDLAARNCLVGENHLVKVADFGLS-RLMTGDTFTAHAGAKFPIKWTA 178
Query: 139 PEYISICVLNEKSNVFSFGAFLFEL 163
PE ++ + KS+V++FG L+E+
Sbjct: 179 PESLAYNKFSIKSDVWAFGVLLWEI 203
>pdb|3IDP|A Chain A, B-Raf V600e Kinase Domain In Complex With An
Aminoisoquinoline Inhibitor
pdb|3IDP|B Chain B, B-Raf V600e Kinase Domain In Complex With An
Aminoisoquinoline Inhibitor
Length = 300
Score = 45.1 bits (105), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 29/104 (27%), Positives = 52/104 (50%), Gaps = 6/104 (5%)
Query: 68 LKIASDIVNSLAYLHFGFPRPIVLRNFKTQNILFNEENVAKWFDFLLSISIPEGETHITT 127
+ IA + YLH + I+ R+ K+ NI +E+ K DF L+
Sbjct: 127 IDIARQTAQGMDYLH---AKSIIHRDLKSNNIFLHEDLTVKIGDFGLATEKSRWSGSHQF 183
Query: 128 DRVIGTRGYSAPEYISICVLNE---KSNVFSFGAFLFELLAGRI 168
+++ G+ + APE I + N +S+V++FG L+EL+ G++
Sbjct: 184 EQLSGSILWMAPEVIRMQDKNPYSFQSDVYAFGIVLYELMTGQL 227
>pdb|1UWJ|A Chain A, The Complex Of Mutant V599e B-raf And Bay439006
pdb|1UWJ|B Chain B, The Complex Of Mutant V599e B-raf And Bay439006
Length = 276
Score = 45.1 bits (105), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 29/104 (27%), Positives = 52/104 (50%), Gaps = 6/104 (5%)
Query: 68 LKIASDIVNSLAYLHFGFPRPIVLRNFKTQNILFNEENVAKWFDFLLSISIPEGETHITT 127
+ IA + YLH + I+ R+ K+ NI +E+ K DF L+
Sbjct: 107 IDIARQTAQGMDYLH---AKSIIHRDLKSNNIFLHEDLTVKIGDFGLATEKSRWSGSHQF 163
Query: 128 DRVIGTRGYSAPEYISICVLNE---KSNVFSFGAFLFELLAGRI 168
+++ G+ + APE I + N +S+V++FG L+EL+ G++
Sbjct: 164 EQLSGSILWMAPEVIRMQDKNPYSFQSDVYAFGIVLYELMTGQL 207
>pdb|4G9R|A Chain A, B-Raf V600e Kinase Domain Bound To A Type Ii
Dihydroquinazoline Inhibitor
pdb|4G9R|B Chain B, B-Raf V600e Kinase Domain Bound To A Type Ii
Dihydroquinazoline Inhibitor
Length = 307
Score = 45.1 bits (105), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 29/104 (27%), Positives = 52/104 (50%), Gaps = 6/104 (5%)
Query: 68 LKIASDIVNSLAYLHFGFPRPIVLRNFKTQNILFNEENVAKWFDFLLSISIPEGETHITT 127
+ IA + YLH + I+ R+ K+ NI +E+ K DF L+
Sbjct: 135 IDIARQTAQGMDYLH---AKSIIHRDLKSNNIFLHEDLTVKIGDFGLATEKSRWSGSHQF 191
Query: 128 DRVIGTRGYSAPEYISICVLNE---KSNVFSFGAFLFELLAGRI 168
+++ G+ + APE I + N +S+V++FG L+EL+ G++
Sbjct: 192 EQLSGSILWMAPEVIRMQDKNPYSFQSDVYAFGIVLYELMTGQL 235
>pdb|4E6D|A Chain A, Jak2 Kinase (Jh1 Domain) Triple Mutant In Complex With
Compound 7
pdb|4E6D|B Chain B, Jak2 Kinase (Jh1 Domain) Triple Mutant In Complex With
Compound 7
pdb|4E6Q|A Chain A, Jak2 Kinase (Jh1 Domain) Triple Mutant In Complex With
Compound 12
pdb|4E6Q|B Chain B, Jak2 Kinase (Jh1 Domain) Triple Mutant In Complex With
Compound 12
Length = 298
Score = 45.1 bits (105), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 43/158 (27%), Positives = 70/158 (44%), Gaps = 19/158 (12%)
Query: 20 ITYAAQMSHNHILKRIGCCLQTPIP--ILVFQSVEYGTLRDCIFGAP-----LPRLKIAS 72
I + H++I+K G C L+ + + YG+LR+ + + L+ S
Sbjct: 65 IEILKSLQHDNIVKYKGVCYSAGRRNLKLIMEFLPYGSLREYLQKHKERIDHIKLLQYTS 124
Query: 73 DIVNSLAYLHFGFPRPIVLRNFKTQNILFNEENVAKWFDFLLSISIPEGETHITTDRVIG 132
I + YL G R + R+ T+NIL EN K DF L+ +P+ + +
Sbjct: 125 QICKGMEYL--GTKR-YIHRDLATRNILVENENRVKIGDFGLTKVLPQDKEXXK----VK 177
Query: 133 TRGYS-----APEYISICVLNEKSNVFSFGAFLFELLA 165
G S APE ++ + S+V+SFG L+EL
Sbjct: 178 EPGESPIFWYAPESLTESKFSVASDVWSFGVVLYELFT 215
>pdb|3G51|A Chain A, Structural Diversity Of The Active Conformation Of The N-
Terminal Kinase Domain Of P90 Ribosomal S6 Kinase 2
Length = 325
Score = 45.1 bits (105), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 33/104 (31%), Positives = 51/104 (49%), Gaps = 11/104 (10%)
Query: 65 LPRLKIASDIVNSLAYLHFGFPRPIVLRNFKTQNILFNEENVAKWFDFLLSISIPEGETH 124
L L +A D ++SL I+ R+ K +NIL +EE K DF LS + E
Sbjct: 132 LAELALALDHLHSLG---------IIYRDLKPENILLDEEGHIKLTDFGLSKESIDHEKK 182
Query: 125 ITTDRVIGTRGYSAPEYISICVLNEKSNVFSFGAFLFELLAGRI 168
+ GT Y APE ++ + ++ +SFG +FE+L G +
Sbjct: 183 AYS--FCGTVEYMAPEVVNRRGHTQSADWWSFGVLMFEMLTGTL 224
>pdb|3IW4|A Chain A, Crystal Structure Of Pkc Alpha In Complex With Nvp-Aeb071
pdb|3IW4|B Chain B, Crystal Structure Of Pkc Alpha In Complex With Nvp-Aeb071
pdb|3IW4|C Chain C, Crystal Structure Of Pkc Alpha In Complex With Nvp-Aeb071
Length = 360
Score = 45.1 bits (105), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 30/98 (30%), Positives = 51/98 (52%), Gaps = 7/98 (7%)
Query: 71 ASDIVNSLAYLHFGFPRPIVLRNFKTQNILFNEENVAKWFDF-LLSISIPEGETHITTDR 129
A++I L +LH R I+ R+ K N++ + E K DF + + +G +TT
Sbjct: 126 AAEISIGLFFLH---KRGIIYRDLKLDNVMLDSEGHIKIADFGMCKEHMMDG---VTTRE 179
Query: 130 VIGTRGYSAPEYISICVLNEKSNVFSFGAFLFELLAGR 167
GT Y APE I+ + + +++G L+E+LAG+
Sbjct: 180 FCGTPDYIAPEIIAYQPYGKSVDWWAYGVLLYEMLAGQ 217
>pdb|3BEA|A Chain A, Cfms Tyrosine Kinase (Tie2 Kid) In Complex With A
Pyrimidinopyridone Inhibitor
Length = 333
Score = 45.1 bits (105), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 41/180 (22%), Positives = 74/180 (41%), Gaps = 17/180 (9%)
Query: 1 MKFYGHEYHRHTYGSCINNITYAAQMSHNHILKRIGCCLQTPIPILVFQSVEYGTL---- 56
+K H + S + +++ Q H +I+ +G C +++ + YG L
Sbjct: 84 LKSTAHADEKEALMSELKIMSHLGQ--HENIVNLLGACTHGGPVLVITEYCCYGDLLNFL 141
Query: 57 -RDCIFGAPLPRLKIASDIVNSLAYLHFG----------FPRPIVLRNFKTQNILFNEEN 105
R P IA+ +++ LHF + + R+ +N+L +
Sbjct: 142 RRKSRVLETDPAFAIANSTLSTRDLLHFSSQVAQGMAFLASKNCIHRDVAARNVLLTNGH 201
Query: 106 VAKWFDFLLSISIPEGETHITTDRVIGTRGYSAPEYISICVLNEKSNVFSFGAFLFELLA 165
VAK DF L+ I +I + APE I CV +S+V+S+G L+E+ +
Sbjct: 202 VAKIGDFGLARDIMNDSNYIVKGNARLPVKWMAPESIFDCVYTVQSDVWSYGILLWEIFS 261
>pdb|3DAJ|A Chain A, Crystal Structure Of Aurora A Complexed With An Inhibitor
Discovered Through Site-Directed Dynamic Tethering
Length = 272
Score = 45.1 bits (105), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 27/95 (28%), Positives = 46/95 (48%), Gaps = 7/95 (7%)
Query: 72 SDIVNSLAYLHFGFPRPIVLRNFKTQNILFNEENVAKWFDFLLSISIPEGETHITTDRVI 131
+++ N+L+Y H + ++ R+ K +N+L K DF S+ P D +
Sbjct: 119 TELANALSYCH---SKRVIHRDIKPENLLLGSNGELKIADFGWSVHAPSSRR----DTLC 171
Query: 132 GTRGYSAPEYISICVLNEKSNVFSFGAFLFELLAG 166
GT Y PE I + +EK +++S G +E L G
Sbjct: 172 GTLDYLPPEMIEGRMHDEKVDLWSLGVLCYEFLVG 206
>pdb|3UBD|A Chain A, Structure Of N-Terminal Domain Of Rsk2 Kinase In Complex
With Flavonoid Glycoside Sl0101
Length = 304
Score = 44.7 bits (104), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 33/104 (31%), Positives = 51/104 (49%), Gaps = 11/104 (10%)
Query: 65 LPRLKIASDIVNSLAYLHFGFPRPIVLRNFKTQNILFNEENVAKWFDFLLSISIPEGETH 124
L L +A D ++SL I+ R+ K +NIL +EE K DF LS + E
Sbjct: 132 LAELALALDHLHSLG---------IIYRDLKPENILLDEEGHIKLTDFGLSKESIDHEKK 182
Query: 125 ITTDRVIGTRGYSAPEYISICVLNEKSNVFSFGAFLFELLAGRI 168
+ GT Y APE ++ + ++ +SFG +FE+L G +
Sbjct: 183 AYS--FCGTVEYMAPEVVNRRGHTQSADWWSFGVLMFEMLTGTL 224
>pdb|2GQG|A Chain A, X-Ray Crystal Structure Of Dasatinib (Bms-354825) Bound To
Activated Abl Kinase Domain
pdb|2GQG|B Chain B, X-Ray Crystal Structure Of Dasatinib (Bms-354825) Bound To
Activated Abl Kinase Domain
Length = 278
Score = 44.7 bits (104), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 34/145 (23%), Positives = 71/145 (48%), Gaps = 10/145 (6%)
Query: 25 QMSHNHILKRIGCCLQTPIPILVFQSVEYGTLRDCIFGA------PLPRLKIASDIVNSL 78
++ H ++++ +G C + P ++ + + YG L D + + L +A+ I +++
Sbjct: 70 EIKHPNLVQLLGVCTREPPFYIITEFMTYGNLLDYLRECNRQEVNAVVLLYMATQISSAM 129
Query: 79 AYLHFGFPRPIVLRNFKTQNILFNEENVAKWFDFLLSISIPEGETHITTDRVIGTRGYSA 138
YL + + R+ +N L E ++ K DF LS + G+T ++A
Sbjct: 130 EYLE---KKNFIHRDLAARNCLVGENHLVKVADFGLS-RLMTGDTXTAHAGAKFPIKWTA 185
Query: 139 PEYISICVLNEKSNVFSFGAFLFEL 163
PE ++ + KS+V++FG L+E+
Sbjct: 186 PESLAYNKFSIKSDVWAFGVLLWEI 210
>pdb|4EL9|A Chain A, Structure Of N-Terminal Kinase Domain Of Rsk2 With Afzelin
pdb|4GUE|A Chain A, Structure Of N-terminal Kinase Domain Of Rsk2 With
Flavonoid Glycoside Quercitrin
Length = 305
Score = 44.7 bits (104), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 33/104 (31%), Positives = 51/104 (49%), Gaps = 11/104 (10%)
Query: 65 LPRLKIASDIVNSLAYLHFGFPRPIVLRNFKTQNILFNEENVAKWFDFLLSISIPEGETH 124
L L +A D ++SL I+ R+ K +NIL +EE K DF LS + E
Sbjct: 133 LAELALALDHLHSLG---------IIYRDLKPENILLDEEGHIKLTDFGLSKESIDHEKK 183
Query: 125 ITTDRVIGTRGYSAPEYISICVLNEKSNVFSFGAFLFELLAGRI 168
+ GT Y APE ++ + ++ +SFG +FE+L G +
Sbjct: 184 AYS--FCGTVEYMAPEVVNRRGHTQSADWWSFGVLMFEMLTGTL 225
>pdb|3LCD|A Chain A, Inhibitor Bound To A Dfg-In Structure Of The Kinase Domain
Of Csf-1r
Length = 329
Score = 44.7 bits (104), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 41/179 (22%), Positives = 76/179 (42%), Gaps = 19/179 (10%)
Query: 1 MKFYGHEYHRHTYGSCINNITYAAQMSHNHILKRIGCCLQTPIPILVFQSVEYGTLRDCI 60
+K H + S + +++ Q H +I+ +G C +++ + YG L + +
Sbjct: 84 LKSTAHADEKEALMSELKIMSHLGQ--HENIVNLLGACTHGGPVLVITEYCCYGDLLNFL 141
Query: 61 F-----------GAPLPR---LKIASDIVNSLAYLHFGFPRPIVLRNFKTQNILFNEENV 106
G PL L +S + +A+L + + R+ +N+L +V
Sbjct: 142 RRKAEADLDKEDGRPLELRDLLHFSSQVAQGMAFLA---SKNCIHRDVAARNVLLTNGHV 198
Query: 107 AKWFDFLLSISIPEGETHITTDRVIGTRGYSAPEYISICVLNEKSNVFSFGAFLFELLA 165
AK DF L+ I +I + APE I CV +S+V+S+G L+E+ +
Sbjct: 199 AKIGDFGLARDIMNDSNYIVKGNARLPVKWMAPESIFDCVYTVQSDVWSYGILLWEIFS 257
>pdb|2OGV|A Chain A, Crystal Structure Of The Autoinhibited Human C-Fms Kinase
Domain
Length = 317
Score = 44.7 bits (104), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 41/179 (22%), Positives = 76/179 (42%), Gaps = 19/179 (10%)
Query: 1 MKFYGHEYHRHTYGSCINNITYAAQMSHNHILKRIGCCLQTPIPILVFQSVEYGTLRDCI 60
+K H + S + +++ Q H +I+ +G C +++ + YG L + +
Sbjct: 76 LKSTAHADEKEALMSELKIMSHLGQ--HENIVNLLGACTHGGPVLVITEYCCYGDLLNFL 133
Query: 61 F-----------GAPLPR---LKIASDIVNSLAYLHFGFPRPIVLRNFKTQNILFNEENV 106
G PL L +S + +A+L + + R+ +N+L +V
Sbjct: 134 RRKAEADLDKEDGRPLELRDLLHFSSQVAQGMAFLA---SKNCIHRDVAARNVLLTNGHV 190
Query: 107 AKWFDFLLSISIPEGETHITTDRVIGTRGYSAPEYISICVLNEKSNVFSFGAFLFELLA 165
AK DF L+ I +I + APE I CV +S+V+S+G L+E+ +
Sbjct: 191 AKIGDFGLARDIMNDSNYIVKGNARLPVKWMAPESIFDCVYTVQSDVWSYGILLWEIFS 249
>pdb|2I1M|A Chain A, Cfms Tyrosine Kinase (Tie2 Kid) In Complex With An
Arylamide Inhibitor
Length = 333
Score = 44.7 bits (104), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 41/180 (22%), Positives = 73/180 (40%), Gaps = 17/180 (9%)
Query: 1 MKFYGHEYHRHTYGSCINNITYAAQMSHNHILKRIGCCLQTPIPILVFQSVEYGTL---- 56
+K H + S + +++ Q H +I+ +G C +++ + YG L
Sbjct: 84 LKSTAHADEKEALMSELKIMSHLGQ--HENIVNLLGACTHGGPVLVITEYCCYGDLLNFL 141
Query: 57 -RDCIFGAPLPRLKIASDIVNSLAYLHFG----------FPRPIVLRNFKTQNILFNEEN 105
R P IA+ ++ LHF + + R+ +N+L +
Sbjct: 142 RRKSRVLETDPAFAIANSTASTRDLLHFSSQVAQGMAFLASKNCIHRDVAARNVLLTNGH 201
Query: 106 VAKWFDFLLSISIPEGETHITTDRVIGTRGYSAPEYISICVLNEKSNVFSFGAFLFELLA 165
VAK DF L+ I +I + APE I CV +S+V+S+G L+E+ +
Sbjct: 202 VAKIGDFGLARDIMNDSNYIVKGNARLPVKWMAPESIFDCVYTVQSDVWSYGILLWEIFS 261
>pdb|1S9I|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 2 (Mek2)in A Complex With Ligand And Mgatp
pdb|1S9I|B Chain B, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 2 (Mek2)in A Complex With Ligand And Mgatp
Length = 354
Score = 44.7 bits (104), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 32/102 (31%), Positives = 49/102 (48%), Gaps = 6/102 (5%)
Query: 69 KIASDIVNSLAYLHFGFPRPIVLRNFKTQNILFNEENVAKWFDFLLSISIPEGETHITTD 128
K++ ++ LAYL I+ R+ K NIL N K DF +S + + +
Sbjct: 118 KVSIAVLRGLAYLRE--KHQIMHRDVKPSNILVNSRGEIKLCDFGVSGQLIDS----MAN 171
Query: 129 RVIGTRGYSAPEYISICVLNEKSNVFSFGAFLFELLAGRIHI 170
+GTR Y APE + + +S+++S G L EL GR I
Sbjct: 172 SFVGTRSYMAPERLQGTHYSVQSDIWSMGLSLVELAVGRYPI 213
>pdb|3KEX|A Chain A, Crystal Structure Of The Catalytically Inactive Kinase
Domain Of The Human Epidermal Growth Factor Receptor 3
(Her3)
pdb|3KEX|B Chain B, Crystal Structure Of The Catalytically Inactive Kinase
Domain Of The Human Epidermal Growth Factor Receptor 3
(Her3)
Length = 325
Score = 44.7 bits (104), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 36/160 (22%), Positives = 72/160 (45%), Gaps = 9/160 (5%)
Query: 10 RHTYGSCINNITYAAQMSHNHILKRIGCCLQTPIPILVFQSVEYGTLRDCIF---GAPLP 66
R ++ + +++ + H HI++ +G C + + LV Q + G+L D + GA P
Sbjct: 56 RQSFQAVTDHMLAIGSLDHAHIVRLLGLCPGSSLQ-LVTQYLPLGSLLDHVRQHRGALGP 114
Query: 67 RLKI--ASDIVNSLAYLHFGFPRPIVLRNFKTQNILFNEENVAKWFDFLLSISIPEGETH 124
+L + I + YL +V RN +N+L + + DF ++ +P +
Sbjct: 115 QLLLNWGVQIAKGMYYLE---EHGMVHRNLAARNVLLKSPSQVQVADFGVADLLPPDDKQ 171
Query: 125 ITTDRVIGTRGYSAPEYISICVLNEKSNVFSFGAFLFELL 164
+ + A E I +S+V+S+G ++EL+
Sbjct: 172 LLYSEAKTPIKWMALESIHFGKYTHQSDVWSYGVTVWELM 211
>pdb|3LMG|A Chain A, Crystal Structure Of The Erbb3 Kinase Domain In Complex
With Amp-Pnp
pdb|3LMG|B Chain B, Crystal Structure Of The Erbb3 Kinase Domain In Complex
With Amp-Pnp
Length = 344
Score = 44.7 bits (104), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 36/160 (22%), Positives = 72/160 (45%), Gaps = 9/160 (5%)
Query: 10 RHTYGSCINNITYAAQMSHNHILKRIGCCLQTPIPILVFQSVEYGTLRDCIF---GAPLP 66
R ++ + +++ + H HI++ +G C + + LV Q + G+L D + GA P
Sbjct: 74 RQSFQAVTDHMLAIGSLDHAHIVRLLGLCPGSSLQ-LVTQYLPLGSLLDHVRQHRGALGP 132
Query: 67 RLKI--ASDIVNSLAYLHFGFPRPIVLRNFKTQNILFNEENVAKWFDFLLSISIPEGETH 124
+L + I + YL +V RN +N+L + + DF ++ +P +
Sbjct: 133 QLLLNWGVQIAKGMYYLE---EHGMVHRNLAARNVLLKSPSQVQVADFGVADLLPPDDKQ 189
Query: 125 ITTDRVIGTRGYSAPEYISICVLNEKSNVFSFGAFLFELL 164
+ + A E I +S+V+S+G ++EL+
Sbjct: 190 LLYSEAKTPIKWMALESIHFGKYTHQSDVWSYGVTVWELM 229
>pdb|4DBN|A Chain A, Crystal Structure Of The Kinase Domain Of Human B-Raf With
A [1, 3]thiazolo[5,4-B]pyridine Derivative
pdb|4DBN|B Chain B, Crystal Structure Of The Kinase Domain Of Human B-Raf With
A [1, 3]thiazolo[5,4-B]pyridine Derivative
Length = 284
Score = 44.7 bits (104), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 29/104 (27%), Positives = 52/104 (50%), Gaps = 6/104 (5%)
Query: 68 LKIASDIVNSLAYLHFGFPRPIVLRNFKTQNILFNEENVAKWFDFLLSISIPEGETHITT 127
+ IA + YLH + I+ R+ K+ NI +E+ K DF L+
Sbjct: 112 IDIARQTAQGMDYLH---AKSIIHRDLKSNNIFLHEDLTVKIGDFGLATVKSRWSGSHQF 168
Query: 128 DRVIGTRGYSAPEYISICVLNE---KSNVFSFGAFLFELLAGRI 168
+++ G+ + APE I + N +S+V++FG L+EL+ G++
Sbjct: 169 EQLSGSILWMAPEVIRMQDKNPYSFQSDVYAFGIVLYELMTGQL 212
>pdb|3C4F|A Chain A, Fgfr Tyrosine Kinase Domain In Complex With 3-(3-
Methoxybenzyl)-7-Azaindole
pdb|3C4F|B Chain B, Fgfr Tyrosine Kinase Domain In Complex With 3-(3-
Methoxybenzyl)-7-Azaindole
Length = 302
Score = 44.7 bits (104), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 36/154 (23%), Positives = 67/154 (43%), Gaps = 17/154 (11%)
Query: 27 SHNHILKRIGCCLQTPIPILVFQSVEYGTLRD------------CIFGAPLPRLKIASDI 74
H +I+ +G C Q ++ + G LR+ C + P +++S
Sbjct: 77 KHKNIINLLGACTQDGPLYVIVEYASKGNLREYLQARRPPGLEYCYNPSHNPEEQLSSKD 136
Query: 75 VNSLAY-----LHFGFPRPIVLRNFKTQNILFNEENVAKWFDFLLSISIPEGETHITTDR 129
+ S AY + + + + R+ +N+L E+NV K DF L+ I + + T
Sbjct: 137 LVSCAYQVARGMEYLASKKCIHRDLAARNVLVTEDNVMKIADFGLARDIHHIDYYKKTTN 196
Query: 130 VIGTRGYSAPEYISICVLNEKSNVFSFGAFLFEL 163
+ APE + + +S+V+SFG L+E+
Sbjct: 197 GRLPVKWMAPEALFDRIYTHQSDVWSFGVLLWEI 230
>pdb|3D4Q|A Chain A, Pyrazole-Based Inhibitors Of B-Raf Kinase
pdb|3D4Q|B Chain B, Pyrazole-Based Inhibitors Of B-Raf Kinase
pdb|3PSB|A Chain A, Furo[2,3-C]pyridine-Based Indanone Oximes As Potent And
Selective B- Raf Inhibitors
pdb|3PSB|B Chain B, Furo[2,3-C]pyridine-Based Indanone Oximes As Potent And
Selective B- Raf Inhibitors
pdb|3PPJ|A Chain A, Human B-Raf Kinase In Complex With A Furopyridine
Inhibitor
pdb|3PPJ|B Chain B, Human B-Raf Kinase In Complex With A Furopyridine
Inhibitor
pdb|3PPK|A Chain A, Human B-Raf Kinase In Complex With A Non-Oxime
Furopyridine Inhibitor
pdb|3PPK|B Chain B, Human B-Raf Kinase In Complex With A Non-Oxime
Furopyridine Inhibitor
pdb|3PRF|A Chain A, Crystal Structure Of Human B-Raf Kinase Domain In Complex
With A Non- Oxime Furopyridine Inhibitor
pdb|3PRF|B Chain B, Crystal Structure Of Human B-Raf Kinase Domain In Complex
With A Non- Oxime Furopyridine Inhibitor
pdb|3PRI|A Chain A, Crystal Structure Of Human B-Raf Kinase In Complex With A
Non-Oxime Furopyridine Inhibitor
pdb|3PRI|B Chain B, Crystal Structure Of Human B-Raf Kinase In Complex With A
Non-Oxime Furopyridine Inhibitor
pdb|3Q4C|A Chain A, Crystal Structure Of Wild Type Braf Kinase Domain In
Complex With Organometallic Inhibitor Cns292
pdb|3Q4C|B Chain B, Crystal Structure Of Wild Type Braf Kinase Domain In
Complex With Organometallic Inhibitor Cns292
pdb|3PSD|A Chain A, Non-Oxime Pyrazole Based Inhibitors Of B-Raf Kinase
pdb|3PSD|B Chain B, Non-Oxime Pyrazole Based Inhibitors Of B-Raf Kinase
pdb|3SKC|A Chain A, Human B-Raf Kinase In Complex With An Amide Linked
Pyrazolopyridine Inhibitor
pdb|3SKC|B Chain B, Human B-Raf Kinase In Complex With An Amide Linked
Pyrazolopyridine Inhibitor
pdb|3TV4|A Chain A, Human B-Raf Kinase Domain In Complex With An Bromopyridine
Benzamide Inhibitor
pdb|3TV4|B Chain B, Human B-Raf Kinase Domain In Complex With An Bromopyridine
Benzamide Inhibitor
pdb|3TV6|A Chain A, Human B-Raf Kinase Domain In Complex With A
Methoxypyrazolopyridinyl Benzamide Inhibitor
pdb|3TV6|B Chain B, Human B-Raf Kinase Domain In Complex With A
Methoxypyrazolopyridinyl Benzamide Inhibitor
pdb|4E26|A Chain A, Braf In Complex With An Organic Inhibitor 7898734
pdb|4E26|B Chain B, Braf In Complex With An Organic Inhibitor 7898734
pdb|4E4X|A Chain A, Crystal Structure Of B-Raf Kinase Domain In Complex With A
Dihydropyrido[2,3-D]pyrimidinone-Based Inhibitor
pdb|4E4X|B Chain B, Crystal Structure Of B-Raf Kinase Domain In Complex With A
Dihydropyrido[2,3-D]pyrimidinone-Based Inhibitor
pdb|4G9C|A Chain A, Human B-Raf Kinase Domain Bound To A Type Ii
Pyrazolopyridine Inhibitor
pdb|4G9C|B Chain B, Human B-Raf Kinase Domain Bound To A Type Ii
Pyrazolopyridine Inhibitor
Length = 307
Score = 44.7 bits (104), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 29/104 (27%), Positives = 52/104 (50%), Gaps = 6/104 (5%)
Query: 68 LKIASDIVNSLAYLHFGFPRPIVLRNFKTQNILFNEENVAKWFDFLLSISIPEGETHITT 127
+ IA + YLH + I+ R+ K+ NI +E+ K DF L+
Sbjct: 135 IDIARQTAQGMDYLH---AKSIIHRDLKSNNIFLHEDLTVKIGDFGLATVKSRWSGSHQF 191
Query: 128 DRVIGTRGYSAPEYISICVLNE---KSNVFSFGAFLFELLAGRI 168
+++ G+ + APE I + N +S+V++FG L+EL+ G++
Sbjct: 192 EQLSGSILWMAPEVIRMQDKNPYSFQSDVYAFGIVLYELMTGQL 235
>pdb|3II5|A Chain A, The Complex Of Wild-Type B-Raf With Pyrazolo Pyrimidine
Inhibitor
pdb|3II5|B Chain B, The Complex Of Wild-Type B-Raf With Pyrazolo Pyrimidine
Inhibitor
Length = 306
Score = 44.7 bits (104), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 29/104 (27%), Positives = 52/104 (50%), Gaps = 6/104 (5%)
Query: 68 LKIASDIVNSLAYLHFGFPRPIVLRNFKTQNILFNEENVAKWFDFLLSISIPEGETHITT 127
+ IA + YLH + I+ R+ K+ NI +E+ K DF L+
Sbjct: 134 IDIARQTAQGMDYLH---AKSIIHRDLKSNNIFLHEDLTVKIGDFGLATVKSRWSGSHQF 190
Query: 128 DRVIGTRGYSAPEYISICVLNE---KSNVFSFGAFLFELLAGRI 168
+++ G+ + APE I + N +S+V++FG L+EL+ G++
Sbjct: 191 EQLSGSILWMAPEVIRMQDKNPYSFQSDVYAFGIVLYELMTGQL 234
>pdb|2JED|A Chain A, The Crystal Structure Of The Kinase Domain Of The Protein
Kinase C Theta In Complex With Nvp-Xaa228 At 2.32a
Resolution.
pdb|2JED|B Chain B, The Crystal Structure Of The Kinase Domain Of The Protein
Kinase C Theta In Complex With Nvp-Xaa228 At 2.32a
Resolution
Length = 352
Score = 44.7 bits (104), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 31/97 (31%), Positives = 49/97 (50%), Gaps = 5/97 (5%)
Query: 71 ASDIVNSLAYLHFGFPRPIVLRNFKTQNILFNEENVAKWFDFLLSISIPEGETHITTDRV 130
A++I+ L +LH + IV R+ K NIL +++ K DF + G+ T+
Sbjct: 125 AAEIILGLQFLH---SKGIVYRDLKLDNILLDKDGHIKIADFGMCKENMLGDA--KTNEF 179
Query: 131 IGTRGYSAPEYISICVLNEKSNVFSFGAFLFELLAGR 167
GT Y APE + N + +SFG L+E+L G+
Sbjct: 180 CGTPDYIAPEILLGQKYNHSVDWWSFGVLLYEMLIGQ 216
>pdb|2J0J|A Chain A, Crystal Structure Of A Fragment Of Focal Adhesion Kinase
Containing The Ferm And Kinase Domains
Length = 656
Score = 44.7 bits (104), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 41/145 (28%), Positives = 66/145 (45%), Gaps = 10/145 (6%)
Query: 25 QMSHNHILKRIGCCLQTPIPILVFQSVEYGTLRDCI----FGAPLPRLKI-ASDIVNSLA 79
Q H HI+K IG + P+ I + + G LR + F L L + A + +LA
Sbjct: 447 QFDHPHIVKLIGVITENPVWI-IMELCTLGELRSFLQVRKFSLDLASLILYAYQLSTALA 505
Query: 80 YLHFGFPRPIVLRNFKTQNILFNEENVAKWFDFLLSISIPEGETHITTDRVIGTRGYSAP 139
YL + V R+ +N+L + + K DF LS + E T+ + + AP
Sbjct: 506 YLE---SKRFVHRDIAARNVLVSSNDCVKLGDFGLSRYM-EDSTYYKASKGKLPIKWMAP 561
Query: 140 EYISICVLNEKSNVFSFGAFLFELL 164
E I+ S+V+ FG ++E+L
Sbjct: 562 ESINFRRFTSASDVWMFGVCMWEIL 586
>pdb|3Q96|A Chain A, B-Raf Kinase Domain In Complex With A
Tetrahydronaphthalene Inhibitor
pdb|3Q96|B Chain B, B-Raf Kinase Domain In Complex With A
Tetrahydronaphthalene Inhibitor
Length = 282
Score = 44.7 bits (104), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 29/104 (27%), Positives = 52/104 (50%), Gaps = 6/104 (5%)
Query: 68 LKIASDIVNSLAYLHFGFPRPIVLRNFKTQNILFNEENVAKWFDFLLSISIPEGETHITT 127
+ IA + YLH + I+ R+ K+ NI +E+ K DF L+
Sbjct: 109 IDIARQTAQGMDYLH---AKSIIHRDLKSNNIFLHEDLTVKIGDFGLATVKSRWSGSHQF 165
Query: 128 DRVIGTRGYSAPEYISICVLNE---KSNVFSFGAFLFELLAGRI 168
+++ G+ + APE I + N +S+V++FG L+EL+ G++
Sbjct: 166 EQLSGSILWMAPEVIRMQDKNPYSFQSDVYAFGIVLYELMTGQL 209
>pdb|2FB8|A Chain A, Structure Of The B-Raf Kinase Domain Bound To Sb-590885
pdb|2FB8|B Chain B, Structure Of The B-Raf Kinase Domain Bound To Sb-590885
Length = 281
Score = 44.7 bits (104), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 29/104 (27%), Positives = 52/104 (50%), Gaps = 6/104 (5%)
Query: 68 LKIASDIVNSLAYLHFGFPRPIVLRNFKTQNILFNEENVAKWFDFLLSISIPEGETHITT 127
+ IA + YLH + I+ R+ K+ NI +E+ K DF L+
Sbjct: 112 IDIARQTAQGMDYLH---AKSIIHRDLKSNNIFLHEDLTVKIGDFGLATVKSRWSGSHQF 168
Query: 128 DRVIGTRGYSAPEYISICVLNE---KSNVFSFGAFLFELLAGRI 168
+++ G+ + APE I + N +S+V++FG L+EL+ G++
Sbjct: 169 EQLSGSILWMAPEVIRMQDKNPYSFQSDVYAFGIVLYELMTGQL 212
>pdb|4H58|A Chain A, Braf In Complex With Compound 3
pdb|4H58|B Chain B, Braf In Complex With Compound 3
pdb|4H58|C Chain C, Braf In Complex With Compound 3
Length = 275
Score = 44.3 bits (103), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 29/104 (27%), Positives = 52/104 (50%), Gaps = 6/104 (5%)
Query: 68 LKIASDIVNSLAYLHFGFPRPIVLRNFKTQNILFNEENVAKWFDFLLSISIPEGETHITT 127
+ IA + YLH + I+ R+ K+ NI +E+ K DF L+
Sbjct: 107 IDIARQTAQGMDYLH---AKSIIHRDLKSNNIFLHEDLTVKIGDFGLATVKSRWSGSHQF 163
Query: 128 DRVIGTRGYSAPEYISICVLNE---KSNVFSFGAFLFELLAGRI 168
+++ G+ + APE I + N +S+V++FG L+EL+ G++
Sbjct: 164 EQLSGSILWMAPEVIRMQDKNPYSFQSDVYAFGIVLYELMTGQL 207
>pdb|1UWH|A Chain A, The Complex Of Wild Type B-Raf And Bay439006
pdb|1UWH|B Chain B, The Complex Of Wild Type B-Raf And Bay439006
Length = 276
Score = 44.3 bits (103), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 29/104 (27%), Positives = 52/104 (50%), Gaps = 6/104 (5%)
Query: 68 LKIASDIVNSLAYLHFGFPRPIVLRNFKTQNILFNEENVAKWFDFLLSISIPEGETHITT 127
+ IA + YLH + I+ R+ K+ NI +E+ K DF L+
Sbjct: 107 IDIARQTAQGMDYLH---AKSIIHRDLKSNNIFLHEDLTVKIGDFGLATVKSRWSGSHQF 163
Query: 128 DRVIGTRGYSAPEYISICVLNE---KSNVFSFGAFLFELLAGRI 168
+++ G+ + APE I + N +S+V++FG L+EL+ G++
Sbjct: 164 EQLSGSILWMAPEVIRMQDKNPYSFQSDVYAFGIVLYELMTGQL 207
>pdb|3EKK|A Chain A, Insulin Receptor Kinase Complexed With An Inhibitor
pdb|3EKN|A Chain A, Insulin Receptor Kinase Complexed With An Inhibitor
Length = 307
Score = 44.3 bits (103), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 34/163 (20%), Positives = 75/163 (46%), Gaps = 17/163 (10%)
Query: 17 INNITYAAQMSHNHILKRIGCCLQTPIPILVFQSVEYGTLRDCIF----------GAPLP 66
+N + + +H+++ +G + ++V + + +G L+ + G P P
Sbjct: 69 LNEASVMKGFTCHHVVRLLGVVSKGQPTLVVMELMAHGDLKSYLRSLRPEAENNPGRPPP 128
Query: 67 RLK----IASDIVNSLAYLHFGFPRPIVLRNFKTQNILFNEENVAKWFDFLLSISIPEGE 122
L+ +A++I + +AYL+ + V RN +N + + K DF ++ I E +
Sbjct: 129 TLQEMIQMAAEIADGMAYLN---AKKFVHRNLAARNCMVAHDFTVKIGDFGMTRDIYETD 185
Query: 123 THITTDRVIGTRGYSAPEYISICVLNEKSNVFSFGAFLFELLA 165
+ + + + APE + V S+++SFG L+E+ +
Sbjct: 186 YYRKGGKGLLPVRWMAPESLKDGVFTTSSDMWSFGVVLWEITS 228
>pdb|1MQB|A Chain A, Crystal Structure Of Ephrin A2 (Epha2) Receptor Protein
Kinase
pdb|1MQB|B Chain B, Crystal Structure Of Ephrin A2 (Epha2) Receptor Protein
Kinase
Length = 333
Score = 44.3 bits (103), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 59/228 (25%), Positives = 94/228 (41%), Gaps = 39/228 (17%)
Query: 24 AQMSHNHILKRIGCCLQTPIPILVFQSVEYGTL------RDCIFGAPLPRLKIASDIVNS 77
Q SH++I++ G + +++ + +E G L +D F L + + I
Sbjct: 101 GQFSHHNIIRLEGVISKYKPMMIITEYMENGALDKFLREKDGEFSV-LQLVGMLRGIAAG 159
Query: 78 LAYLHFGFPRPIVLRNFKTQNILFNEENVAKWFDFLLSISI---PEGETHITTDRVIGTR 134
+ YL V R+ +NIL N V K DF LS + PE T+ T+ I R
Sbjct: 160 MKYLA---NMNYVHRDLAARNILVNSNLVCKVSDFGLSRVLEDDPEA-TYTTSGGKIPIR 215
Query: 135 GYSAPEYISICVLNEKSNVFSFGAFLFELLA-GRIHIWDLLKDTHDHGCFFNEYLKNYLE 193
++APE IS S+V+SFG ++E++ G W+L H+ N+ +
Sbjct: 216 -WTAPEAISYRKFTSASDVWSFGIVMWEVMTYGERPYWEL--SNHEVMKAINDGFR---- 268
Query: 194 DKRFTGIPAPIIVQDIPCIEKEQQLHASAQLTLECVNNSPEDRPTMVD 241
+P P+ D P A QL ++C RP D
Sbjct: 269 ------LPTPM---DCPS--------AIYQLMMQCWQQERARRPKFAD 299
>pdb|3GQL|A Chain A, Crystal Structure Of Activated Receptor Tyrosine Kinase In
Complex With Substrates
pdb|3GQL|B Chain B, Crystal Structure Of Activated Receptor Tyrosine Kinase In
Complex With Substrates
pdb|3GQL|C Chain C, Crystal Structure Of Activated Receptor Tyrosine Kinase In
Complex With Substrates
Length = 326
Score = 44.3 bits (103), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 36/154 (23%), Positives = 67/154 (43%), Gaps = 17/154 (11%)
Query: 27 SHNHILKRIGCCLQTPIPILVFQSVEYGTLRD------------CIFGAPLPRLKIASDI 74
H +I+ +G C Q ++ + G LR+ C + P +++S
Sbjct: 92 KHKNIINLLGACTQDGPLYVIVEYASKGNLREYLQARRPPGLEYCYNPSHNPEEQLSSKD 151
Query: 75 VNSLAY-----LHFGFPRPIVLRNFKTQNILFNEENVAKWFDFLLSISIPEGETHITTDR 129
+ S AY + + + + R+ +N+L E+NV K DF L+ I + + T
Sbjct: 152 LVSCAYQVARGMEYLASKKCIHRDLAARNVLVTEDNVMKIADFGLARDIHHIDYYKKTTN 211
Query: 130 VIGTRGYSAPEYISICVLNEKSNVFSFGAFLFEL 163
+ APE + + +S+V+SFG L+E+
Sbjct: 212 GRLPVKWMAPEALFDRIYTHQSDVWSFGVLLWEI 245
>pdb|3KUL|A Chain A, Kinase Domain Of Human Ephrin Type-A Receptor 8 (Epha8)
Length = 325
Score = 44.3 bits (103), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 54/235 (22%), Positives = 96/235 (40%), Gaps = 47/235 (20%)
Query: 17 INNITYAAQMSHNHILKRIGCCLQTPIPILVFQSVEYGTL------RDCIFG-----APL 65
++ + Q H +I++ G + + ++V + +E G+L D F L
Sbjct: 98 LSEASIMGQFDHPNIIRLEGVVTRGRLAMIVTEYMENGSLDTFLRTHDGQFTIMQLVGML 157
Query: 66 PRLKIASDIVNSLAYLHFGFPRPIVLRNFKTQNILFNEENVAKWFDFLLSISIPEG--ET 123
+ ++ L Y+H R+ +N+L + V K DF LS + +
Sbjct: 158 RGVGAGMRYLSDLGYVH---------RDLAARNVLVDSNLVCKVSDFGLSRVLEDDPDAA 208
Query: 124 HITTDRVIGTRGYSAPEYISICVLNEKSNVFSFGAFLFELLA-GRIHIWDLLKDTHDHGC 182
+ TT I R ++APE I+ + S+V+SFG ++E+LA G W++
Sbjct: 209 YTTTGGKIPIR-WTAPEAIAFRTFSSASDVWSFGVVMWEVLAYGERPYWNMTN------- 260
Query: 183 FFNEYLKNYLEDKRFTGIPAPIIVQDIPCIEKEQQLHASAQLTLECVNNSPEDRP 237
+ + + E R +PAP+ HA QL L+C + RP
Sbjct: 261 --RDVISSVEEGYR---LPAPMGCP-----------HALHQLMLDCWHKDRAQRP 299
>pdb|1P14|A Chain A, Crystal Structure Of A Catalytic-Loop Mutant Of The
Insulin Receptor Tyrosine Kinase
Length = 306
Score = 44.3 bits (103), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 34/163 (20%), Positives = 75/163 (46%), Gaps = 17/163 (10%)
Query: 17 INNITYAAQMSHNHILKRIGCCLQTPIPILVFQSVEYGTLRDCIF----------GAPLP 66
+N + + +H+++ +G + ++V + + +G L+ + G P P
Sbjct: 68 LNEASVMKGFTCHHVVRLLGVVSKGQPTLVVMELMAHGDLKSYLRSLRPEAENNPGRPPP 127
Query: 67 RLK----IASDIVNSLAYLHFGFPRPIVLRNFKTQNILFNEENVAKWFDFLLSISIPEGE 122
L+ +A++I + +AYL+ + V RN +N + + K DF ++ I E +
Sbjct: 128 TLQEMIQMAAEIADGMAYLN---AKKFVHRNLAARNCMVAHDFTVKIGDFGMTRDIYETD 184
Query: 123 THITTDRVIGTRGYSAPEYISICVLNEKSNVFSFGAFLFELLA 165
+ + + + APE + V S+++SFG L+E+ +
Sbjct: 185 YYRKGGKGLLPVRWMAPESLKDGVFTTSSDMWSFGVVLWEITS 227
>pdb|3KXX|A Chain A, Structure Of The Mutant Fibroblast Growth Factor Receptor
1
pdb|3KXX|B Chain B, Structure Of The Mutant Fibroblast Growth Factor Receptor
1
pdb|3KXX|C Chain C, Structure Of The Mutant Fibroblast Growth Factor Receptor
1
pdb|3KXX|D Chain D, Structure Of The Mutant Fibroblast Growth Factor Receptor
1
Length = 317
Score = 44.3 bits (103), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 36/154 (23%), Positives = 67/154 (43%), Gaps = 17/154 (11%)
Query: 27 SHNHILKRIGCCLQTPIPILVFQSVEYGTLRDCIFGAPLPRL------------KIASDI 74
H +I+ +G C Q ++ + G LR+ + P L +++S
Sbjct: 92 KHKNIINLLGACTQDGPLYVIVEYASKGNLREYLQAREPPGLEYSYNPSHNPEEQLSSKD 151
Query: 75 VNSLAY-----LHFGFPRPIVLRNFKTQNILFNEENVAKWFDFLLSISIPEGETHITTDR 129
+ S AY + + + + R+ +N+L E+NV K DF L+ I + + T
Sbjct: 152 LVSCAYQVARGMEYLASKKCIHRDLAARNVLVTEDNVMKIADFGLARDIHHIDYYKKTTN 211
Query: 130 VIGTRGYSAPEYISICVLNEKSNVFSFGAFLFEL 163
+ APE + + +S+V+SFG L+E+
Sbjct: 212 GRLPVKWMAPEALFDRIYTHQSDVWSFGVLLWEI 245
>pdb|3COM|A Chain A, Crystal Structure Of Mst1 Kinase
pdb|3COM|B Chain B, Crystal Structure Of Mst1 Kinase
Length = 314
Score = 44.3 bits (103), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 42/156 (26%), Positives = 67/156 (42%), Gaps = 10/156 (6%)
Query: 17 INNITYAAQMSHNHILKRIGCCLQTPIPILVFQSVEYGTLRDCIF--GAPLPRLKIAS-- 72
I I+ Q H++K G + +V + G++ D I L +IA+
Sbjct: 72 IKEISIMQQCDSPHVVKYYGSYFKNTDLWIVMEYCGAGSVSDIIRLRNKTLTEDEIATIL 131
Query: 73 -DIVNSLAYLHFGFPRPIVLRNFKTQNILFNEENVAKWFDFLLSISIPEGETHITTDRVI 131
+ L YLHF + R+ K NIL N E AK DF ++ + + + VI
Sbjct: 132 QSTLKGLEYLHFMRK---IHRDIKAGNILLNTEGHAKLADFGVAGQL--TDXMAKRNXVI 186
Query: 132 GTRGYSAPEYISICVLNEKSNVFSFGAFLFELLAGR 167
GT + APE I N ++++S G E+ G+
Sbjct: 187 GTPFWMAPEVIQEIGYNCVADIWSLGITAIEMAEGK 222
>pdb|2JKK|A Chain A, Focal Adhesion Kinase Catalytic Domain In Complex With
Bis- Anilino Pyrimidine Inhibitor
pdb|2JKO|A Chain A, Focal Adhesion Kinase Catalytic Domain In Complex With
Bis- Anilino Pyrimidine Inhibitor
Length = 276
Score = 44.3 bits (103), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 41/145 (28%), Positives = 66/145 (45%), Gaps = 10/145 (6%)
Query: 25 QMSHNHILKRIGCCLQTPIPILVFQSVEYGTLRDCI----FGAPLPRLKI-ASDIVNSLA 79
Q H HI+K IG + P+ I + + G LR + F L L + A + +LA
Sbjct: 67 QFDHPHIVKLIGVITENPVWI-IMELCTLGELRSFLQVRKFSLDLASLILYAYQLSTALA 125
Query: 80 YLHFGFPRPIVLRNFKTQNILFNEENVAKWFDFLLSISIPEGETHITTDRVIGTRGYSAP 139
YL + V R+ +N+L + + K DF LS + E T+ + + AP
Sbjct: 126 YLE---SKRFVHRDIAARNVLVSATDCVKLGDFGLSRYM-EDSTYYKASKGKLPIKWMAP 181
Query: 140 EYISICVLNEKSNVFSFGAFLFELL 164
E I+ S+V+ FG ++E+L
Sbjct: 182 ESINFRRFTSASDVWMFGVCMWEIL 206
>pdb|3PFQ|A Chain A, Crystal Structure And Allosteric Activation Of Protein
Kinase C Beta Ii
Length = 674
Score = 44.3 bits (103), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 30/98 (30%), Positives = 51/98 (52%), Gaps = 7/98 (7%)
Query: 71 ASDIVNSLAYLHFGFPRPIVLRNFKTQNILFNEENVAKWFDF-LLSISIPEGETHITTDR 129
A++I L +L + I+ R+ K N++ + E K DF + +I +G +TT
Sbjct: 448 AAEIAIGLFFLQ---SKGIIYRDLKLDNVMLDSEGHIKIADFGMCKENIWDG---VTTKX 501
Query: 130 VIGTRGYSAPEYISICVLNEKSNVFSFGAFLFELLAGR 167
GT Y APE I+ + + ++FG L+E+LAG+
Sbjct: 502 FCGTPDYIAPEIIAYQPYGKSVDWWAFGVLLYEMLAGQ 539
>pdb|2J0K|A Chain A, Crystal Structure Of A Fragment Of Focal Adhesion Kinase
Containing The Ferm And Kinase Domains.
pdb|2J0K|B Chain B, Crystal Structure Of A Fragment Of Focal Adhesion Kinase
Containing The Ferm And Kinase Domains
Length = 656
Score = 44.3 bits (103), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 41/145 (28%), Positives = 66/145 (45%), Gaps = 10/145 (6%)
Query: 25 QMSHNHILKRIGCCLQTPIPILVFQSVEYGTLRDCI----FGAPLPRLKI-ASDIVNSLA 79
Q H HI+K IG + P+ I + + G LR + F L L + A + +LA
Sbjct: 447 QFDHPHIVKLIGVITENPVWI-IMELCTLGELRSFLQVRKFSLDLASLILYAYQLSTALA 505
Query: 80 YLHFGFPRPIVLRNFKTQNILFNEENVAKWFDFLLSISIPEGETHITTDRVIGTRGYSAP 139
YL + V R+ +N+L + + K DF LS + E T+ + + AP
Sbjct: 506 YLE---SKRFVHRDIAARNVLVSATDCVKLGDFGLSRYM-EDSTYYKASKGKLPIKWMAP 561
Query: 140 EYISICVLNEKSNVFSFGAFLFELL 164
E I+ S+V+ FG ++E+L
Sbjct: 562 ESINFRRFTSASDVWMFGVCMWEIL 586
>pdb|1XJD|A Chain A, Crystal Structure Of Pkc-Theta Complexed With
Staurosporine At 2a Resolution
Length = 345
Score = 44.3 bits (103), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 31/97 (31%), Positives = 49/97 (50%), Gaps = 5/97 (5%)
Query: 71 ASDIVNSLAYLHFGFPRPIVLRNFKTQNILFNEENVAKWFDFLLSISIPEGETHITTDRV 130
A++I+ L +LH + IV R+ K NIL +++ K DF + G+ T+
Sbjct: 124 AAEIILGLQFLH---SKGIVYRDLKLDNILLDKDGHIKIADFGMCKENMLGDA--KTNXF 178
Query: 131 IGTRGYSAPEYISICVLNEKSNVFSFGAFLFELLAGR 167
GT Y APE + N + +SFG L+E+L G+
Sbjct: 179 CGTPDYIAPEILLGQKYNHSVDWWSFGVLLYEMLIGQ 215
>pdb|2I0E|A Chain A, Structure Of Catalytic Domain Of Human Protein Kinase C
Beta Ii Complexed With A Bisindolylmaleimide Inhibitor
pdb|2I0E|B Chain B, Structure Of Catalytic Domain Of Human Protein Kinase C
Beta Ii Complexed With A Bisindolylmaleimide Inhibitor
Length = 353
Score = 44.3 bits (103), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 30/98 (30%), Positives = 51/98 (52%), Gaps = 7/98 (7%)
Query: 71 ASDIVNSLAYLHFGFPRPIVLRNFKTQNILFNEENVAKWFDF-LLSISIPEGETHITTDR 129
A++I L +L + I+ R+ K N++ + E K DF + +I +G +TT
Sbjct: 127 AAEIAIGLFFLQ---SKGIIYRDLKLDNVMLDSEGHIKIADFGMCKENIWDG---VTTKX 180
Query: 130 VIGTRGYSAPEYISICVLNEKSNVFSFGAFLFELLAGR 167
GT Y APE I+ + + ++FG L+E+LAG+
Sbjct: 181 FCGTPDYIAPEIIAYQPYGKSVDWWAFGVLLYEMLAGQ 218
>pdb|2C6E|A Chain A, Aurora A Kinase Activated Mutant (T287d) In Complex With A
5-Aminopyrimidinyl Quinazoline Inhibitor
pdb|2C6E|B Chain B, Aurora A Kinase Activated Mutant (T287d) In Complex With A
5-Aminopyrimidinyl Quinazoline Inhibitor
Length = 283
Score = 43.9 bits (102), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 28/96 (29%), Positives = 48/96 (50%), Gaps = 7/96 (7%)
Query: 72 SDIVNSLAYLHFGFPRPIVLRNFKTQNILFNEENVAKWFDFLLSISIPEGETHITTDRVI 131
+++ N+L+Y H + ++ R+ K +N+L K DF S+ P TD +
Sbjct: 120 TELANALSYCH---SKRVIHRDIKPENLLLGSAGELKIADFGWSVHAPSSRR---TD-LC 172
Query: 132 GTRGYSAPEYISICVLNEKSNVFSFGAFLFELLAGR 167
GT Y PE I + +EK +++S G +E L G+
Sbjct: 173 GTLDYLPPEMIEGRMHDEKVDLWSLGVLCYEFLVGK 208
>pdb|3RHX|B Chain B, Crystal Structure Of The Catalytic Domain Of Fgfr1 Kinase
In Complex With Arq 069
pdb|3RHX|A Chain A, Crystal Structure Of The Catalytic Domain Of Fgfr1 Kinase
In Complex With Arq 069
Length = 306
Score = 43.9 bits (102), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 36/154 (23%), Positives = 67/154 (43%), Gaps = 17/154 (11%)
Query: 27 SHNHILKRIGCCLQTPIPILVFQSVEYGTLRDCIFGAPLPRL------------KIASDI 74
H +I+ +G C Q ++ + G LR+ + P L +++S
Sbjct: 81 KHKNIINLLGACTQDGPLYVIVEYASKGNLREYLQARRPPGLEYSYNPSHNPEEQLSSKD 140
Query: 75 VNSLAY-----LHFGFPRPIVLRNFKTQNILFNEENVAKWFDFLLSISIPEGETHITTDR 129
+ S AY + + + + R+ +N+L E+NV K DF L+ I + + T
Sbjct: 141 LVSCAYQVARGMEYLASKKCIHRDLAARNVLVTEDNVMKIADFGLARDIHHIDYYKKTTN 200
Query: 130 VIGTRGYSAPEYISICVLNEKSNVFSFGAFLFEL 163
+ APE + + +S+V+SFG L+E+
Sbjct: 201 GRLPVKWMAPEALFDRIYTHQSDVWSFGVLLWEI 234
>pdb|2C6D|A Chain A, Aurora A Kinase Activated Mutant (T287d) In Complex With
Adpnp
Length = 275
Score = 43.9 bits (102), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 28/96 (29%), Positives = 48/96 (50%), Gaps = 7/96 (7%)
Query: 72 SDIVNSLAYLHFGFPRPIVLRNFKTQNILFNEENVAKWFDFLLSISIPEGETHITTDRVI 131
+++ N+L+Y H + ++ R+ K +N+L K DF S+ P TD +
Sbjct: 115 TELANALSYCH---SKRVIHRDIKPENLLLGSAGELKIADFGWSVHAPSSRR---TD-LC 167
Query: 132 GTRGYSAPEYISICVLNEKSNVFSFGAFLFELLAGR 167
GT Y PE I + +EK +++S G +E L G+
Sbjct: 168 GTLDYLPPEMIEGRMHDEKVDLWSLGVLCYEFLVGK 203
>pdb|3BBT|B Chain B, Crystal Structure Of The Erbb4 Kinase In Complex With
Lapatinib
pdb|3BBT|D Chain D, Crystal Structure Of The Erbb4 Kinase In Complex With
Lapatinib
pdb|3BBW|B Chain B, Crystal Structure Of The Erbb4 Kinase In Its Inactive
Conformation
pdb|3BBW|A Chain A, Crystal Structure Of The Erbb4 Kinase In Its Inactive
Conformation
pdb|3BCE|A Chain A, Crystal Structure Of The Erbb4 Kinase
pdb|3BCE|B Chain B, Crystal Structure Of The Erbb4 Kinase
pdb|3BCE|C Chain C, Crystal Structure Of The Erbb4 Kinase
Length = 328
Score = 43.9 bits (102), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 40/148 (27%), Positives = 65/148 (43%), Gaps = 11/148 (7%)
Query: 24 AQMSHNHILKRIGCCLQTPIPILVFQSVEYGTLRDCI------FGAPLPRLKIASDIVNS 77
A M H H+++ +G CL +P LV Q + +G L + + G+ L L I
Sbjct: 72 ASMDHPHLVRLLGVCL-SPTIQLVTQLMPHGCLLEYVHEHKDNIGSQL-LLNWCVQIAKG 129
Query: 78 LAYLHFGFPRPIVLRNFKTQNILFNEENVAKWFDFLLSISIPEGETHITTDRVIGTRGYS 137
+ YL R +V R+ +N+L N K DF L+ + E D +
Sbjct: 130 MMYLE---ERRLVHRDLAARNVLVKSPNHVKITDFGLARLLEGDEKEYNADGGKMPIKWM 186
Query: 138 APEYISICVLNEKSNVFSFGAFLFELLA 165
A E I +S+V+S+G ++EL+
Sbjct: 187 ALECIHYRKFTHQSDVWSYGVTIWELMT 214
>pdb|3LAU|A Chain A, Crystal Structure Of Aurora2 Kinase In Complex With A
Gsk3beta Inhibitor
Length = 287
Score = 43.9 bits (102), Expect = 8e-05, Method: Compositional matrix adjust.
Identities = 28/96 (29%), Positives = 48/96 (50%), Gaps = 7/96 (7%)
Query: 72 SDIVNSLAYLHFGFPRPIVLRNFKTQNILFNEENVAKWFDFLLSISIPEGETHITTDRVI 131
+++ N+L+Y H + ++ R+ K +N+L K DF S+ P TD +
Sbjct: 115 TELANALSYCH---SKRVIHRDIKPENLLLGSAGELKIADFGWSVHAPSSRR---TD-LC 167
Query: 132 GTRGYSAPEYISICVLNEKSNVFSFGAFLFELLAGR 167
GT Y PE I + +EK +++S G +E L G+
Sbjct: 168 GTLDYLPPEMIEGRMHDEKVDLWSLGVLCYEFLVGK 203
>pdb|1FGK|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of
Fibroblast Growth Factor Receptor 1
pdb|1FGK|B Chain B, Crystal Structure Of The Tyrosine Kinase Domain Of
Fibroblast Growth Factor Receptor 1
pdb|1FGI|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of
Fibroblast Growth Factor Receptor 1 In Complex With
Su5402 Inhibitor
pdb|1FGI|B Chain B, Crystal Structure Of The Tyrosine Kinase Domain Of
Fibroblast Growth Factor Receptor 1 In Complex With
Su5402 Inhibitor
pdb|1AGW|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of
Fibroblast Growth Factor Receptor 1 In Complex With
Su4984 Inhibitor
pdb|1AGW|B Chain B, Crystal Structure Of The Tyrosine Kinase Domain Of
Fibroblast Growth Factor Receptor 1 In Complex With
Su4984 Inhibitor
pdb|2FGI|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of Fgf
Receptor 1 In Complex With Inhibitor Pd173074
pdb|2FGI|B Chain B, Crystal Structure Of The Tyrosine Kinase Domain Of Fgf
Receptor 1 In Complex With Inhibitor Pd173074
Length = 310
Score = 43.9 bits (102), Expect = 8e-05, Method: Compositional matrix adjust.
Identities = 36/154 (23%), Positives = 67/154 (43%), Gaps = 17/154 (11%)
Query: 27 SHNHILKRIGCCLQTPIPILVFQSVEYGTLRDCIFGAPLPRL------------KIASDI 74
H +I+ +G C Q ++ + G LR+ + P L +++S
Sbjct: 85 KHKNIINLLGACTQDGPLYVIVEYASKGNLREYLQARRPPGLEYSYNPSHNPEEQLSSKD 144
Query: 75 VNSLAY-----LHFGFPRPIVLRNFKTQNILFNEENVAKWFDFLLSISIPEGETHITTDR 129
+ S AY + + + + R+ +N+L E+NV K DF L+ I + + T
Sbjct: 145 LVSCAYQVARGMEYLASKKCIHRDLAARNVLVTEDNVMKIADFGLARDIHHIDYYKKTTN 204
Query: 130 VIGTRGYSAPEYISICVLNEKSNVFSFGAFLFEL 163
+ APE + + +S+V+SFG L+E+
Sbjct: 205 GRLPVKWMAPEALFDRIYTHQSDVWSFGVLLWEI 238
>pdb|3JS2|A Chain A, Crystal Structure Of Minimal Kinase Domain Of Fibroblast
Growth Factor Receptor 1 In Complex With 5-(2-Thienyl)
Nicotinic Acid
pdb|3JS2|B Chain B, Crystal Structure Of Minimal Kinase Domain Of Fibroblast
Growth Factor Receptor 1 In Complex With 5-(2-Thienyl)
Nicotinic Acid
pdb|3KY2|A Chain A, Crystal Structure Of Fibroblast Growth Factor Receptor 1
Kinase Domain
pdb|3KY2|B Chain B, Crystal Structure Of Fibroblast Growth Factor Receptor 1
Kinase Domain
Length = 317
Score = 43.9 bits (102), Expect = 8e-05, Method: Compositional matrix adjust.
Identities = 36/154 (23%), Positives = 67/154 (43%), Gaps = 17/154 (11%)
Query: 27 SHNHILKRIGCCLQTPIPILVFQSVEYGTLRDCIFGAPLPRL------------KIASDI 74
H +I+ +G C Q ++ + G LR+ + P L +++S
Sbjct: 92 KHKNIINLLGACTQDGPLYVIVEYASKGNLREYLQARRPPGLEYSYNPSHNPEEQLSSKD 151
Query: 75 VNSLAY-----LHFGFPRPIVLRNFKTQNILFNEENVAKWFDFLLSISIPEGETHITTDR 129
+ S AY + + + + R+ +N+L E+NV K DF L+ I + + T
Sbjct: 152 LVSCAYQVARGMEYLASKKCIHRDLAARNVLVTEDNVMKIADFGLARDIHHIDYYKKTTN 211
Query: 130 VIGTRGYSAPEYISICVLNEKSNVFSFGAFLFEL 163
+ APE + + +S+V+SFG L+E+
Sbjct: 212 GRLPVKWMAPEALFDRIYTHQSDVWSFGVLLWEI 245
>pdb|3FDN|A Chain A, Structure-Based Drug Design Of Novel Aurora Kinase A
Inhibitors: Structure Basis For Potency And Specificity
pdb|3K5U|A Chain A, Identification, Sar Studies And X-Ray Cocrystal Analysis
Of A Novel Furano-Pyrimidine Aurora Kinase A Inhibitor
pdb|3M11|A Chain A, Crystal Structure Of Aurora A Kinase Complexed With
Inhibitor
Length = 279
Score = 43.9 bits (102), Expect = 8e-05, Method: Compositional matrix adjust.
Identities = 28/96 (29%), Positives = 48/96 (50%), Gaps = 7/96 (7%)
Query: 72 SDIVNSLAYLHFGFPRPIVLRNFKTQNILFNEENVAKWFDFLLSISIPEGETHITTDRVI 131
+++ N+L+Y H + ++ R+ K +N+L K DF S+ P TD +
Sbjct: 116 TELANALSYCH---SKRVIHRDIKPENLLLGSAGELKIADFGWSVHAPSSRR---TD-LC 168
Query: 132 GTRGYSAPEYISICVLNEKSNVFSFGAFLFELLAGR 167
GT Y PE I + +EK +++S G +E L G+
Sbjct: 169 GTLDYLPPEMIEGRMHDEKVDLWSLGVLCYEFLVGK 204
>pdb|4F63|A Chain A, Crystal Structure Of Human Fibroblast Growth Factor
Receptor 1 Kinase Domain In Complex With Compound 1
pdb|4F63|B Chain B, Crystal Structure Of Human Fibroblast Growth Factor
Receptor 1 Kinase Domain In Complex With Compound 1
pdb|4F64|A Chain A, Crystal Structure Of Human Fibroblast Growth Factor
Receptor 1 Kinase Domain In Complex With Compound 6
pdb|4F64|B Chain B, Crystal Structure Of Human Fibroblast Growth Factor
Receptor 1 Kinase Domain In Complex With Compound 6
pdb|4F65|A Chain A, Crystal Structure Of Human Fibroblast Growth Factor
Receptor 1 Kinase Domain In Complex With Compound 8
pdb|4F65|B Chain B, Crystal Structure Of Human Fibroblast Growth Factor
Receptor 1 Kinase Domain In Complex With Compound 8
Length = 309
Score = 43.9 bits (102), Expect = 8e-05, Method: Compositional matrix adjust.
Identities = 36/154 (23%), Positives = 67/154 (43%), Gaps = 17/154 (11%)
Query: 27 SHNHILKRIGCCLQTPIPILVFQSVEYGTLRDCIFGAPLPRL------------KIASDI 74
H +I+ +G C Q ++ + G LR+ + P L +++S
Sbjct: 84 KHKNIINLLGACTQDGPLYVIVEYASKGNLREYLQARRPPGLEYSYNPSHNPEEQLSSKD 143
Query: 75 VNSLAY-----LHFGFPRPIVLRNFKTQNILFNEENVAKWFDFLLSISIPEGETHITTDR 129
+ S AY + + + + R+ +N+L E+NV K DF L+ I + + T
Sbjct: 144 LVSCAYQVARGMEYLASKKCIHRDLAARNVLVTEDNVMKIADFGLARDIHHIDYYKKTTN 203
Query: 130 VIGTRGYSAPEYISICVLNEKSNVFSFGAFLFEL 163
+ APE + + +S+V+SFG L+E+
Sbjct: 204 GRLPVKWMAPEALFDRIYTHQSDVWSFGVLLWEI 237
>pdb|1F3M|C Chain C, Crystal Structure Of Human SerineTHREONINE KINASE PAK1
pdb|1F3M|D Chain D, Crystal Structure Of Human SerineTHREONINE KINASE PAK1
pdb|1YHW|A Chain A, Crystal Structure Of Pak1 Kinase Domain With One Point
Mutations (K299r)
Length = 297
Score = 43.9 bits (102), Expect = 9e-05, Method: Compositional matrix adjust.
Identities = 29/121 (23%), Positives = 55/121 (45%), Gaps = 2/121 (1%)
Query: 46 LVFQSVEYGTLRDCIFGAPLPRLKIASDIVNSLAYLHFGFPRPIVLRNFKTQNILFNEEN 105
+V + + G+L D + + +IA+ L L F ++ R+ K+ NIL +
Sbjct: 94 VVMEYLAGGSLTDVVTETCMDEGQIAAVCRECLQALEFLHSNQVIHRDIKSDNILLGMDG 153
Query: 106 VAKWFDFLLSISIPEGETHITTDRVIGTRGYSAPEYISICVLNEKSNVFSFGAFLFELLA 165
K DF I ++ +T ++GT + APE ++ K +++S G E++
Sbjct: 154 SVKLTDFGFCAQITPEQSKRST--MVGTPYWMAPEVVTRKAYGPKVDIWSLGIMAIEMIE 211
Query: 166 G 166
G
Sbjct: 212 G 212
>pdb|3V5Q|A Chain A, Discovery Of A Selective Trk Inhibitor With Efficacy In
Rodent Cancer Tumor Models
pdb|3V5Q|B Chain B, Discovery Of A Selective Trk Inhibitor With Efficacy In
Rodent Cancer Tumor Models
Length = 297
Score = 43.5 bits (101), Expect = 9e-05, Method: Compositional matrix adjust.
Identities = 45/175 (25%), Positives = 69/175 (39%), Gaps = 29/175 (16%)
Query: 26 MSHNHILKRIGCCLQTPIPILVFQSVEYGTLRD---------CIFGAPLPR--------- 67
+ H HI+K G C I+VF+ +++G L I PR
Sbjct: 74 LQHEHIVKFYGVCGDGDPLIMVFEYMKHGDLNKFLRAHGPDAMILVDGQPRQAKGELGLS 133
Query: 68 --LKIASDIVNSLAYL---HFGFPRPIVLRNFKTQNILFNEENVAKWFDFLLSISIPEGE 122
L IAS I + + YL HF V R+ T+N L + K DF +S + +
Sbjct: 134 QMLHIASQIASGMVYLASQHF------VHRDLATRNCLVGANLLVKIGDFGMSRDVYSTD 187
Query: 123 THITTDRVIGTRGYSAPEYISICVLNEKSNVFSFGAFLFELLAGRIHIWDLLKDT 177
+ + + PE I +S+V+SFG L+E+ W L +T
Sbjct: 188 YYRVGGHTMLPIRWMPPESIMYRKFTTESDVWSFGVILWEIFTYGKQPWFQLSNT 242
>pdb|2J0L|A Chain A, Crystal Structure Of A The Active Conformation Of The
Kinase Domain Of Focal Adhesion Kinase With A
Phosphorylated Activation Loop
Length = 276
Score = 43.5 bits (101), Expect = 9e-05, Method: Compositional matrix adjust.
Identities = 41/145 (28%), Positives = 65/145 (44%), Gaps = 10/145 (6%)
Query: 25 QMSHNHILKRIGCCLQTPIPILVFQSVEYGTLRDCI----FGAPLPRLKI-ASDIVNSLA 79
Q H HI+K IG + P+ I + + G LR + F L L + A + +LA
Sbjct: 67 QFDHPHIVKLIGVITENPVWI-IMELCTLGELRSFLQVRKFSLDLASLILYAYQLSTALA 125
Query: 80 YLHFGFPRPIVLRNFKTQNILFNEENVAKWFDFLLSISIPEGETHITTDRVIGTRGYSAP 139
YL + V R+ +N+L + + K DF LS + E T + + AP
Sbjct: 126 YLE---SKRFVHRDIAARNVLVSSNDCVKLGDFGLSRYM-EDSTXXKASKGKLPIKWMAP 181
Query: 140 EYISICVLNEKSNVFSFGAFLFELL 164
E I+ S+V+ FG ++E+L
Sbjct: 182 ESINFRRFTSASDVWMFGVCMWEIL 206
>pdb|2OZO|A Chain A, Autoinhibited Intact Human Zap-70
Length = 613
Score = 43.5 bits (101), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 40/148 (27%), Positives = 71/148 (47%), Gaps = 12/148 (8%)
Query: 25 QMSHNHILKRIGCCLQTPIPILVFQSVEYGTLRDCIFGAPLPRLKI-ASDIVNSLAYLHF 83
Q+ + +I++ IG C Q +LV + G L + G R +I S++ L +
Sbjct: 392 QLDNPYIVRLIGVC-QAEALMLVMEMAGGGPLHKFLVGK---REEIPVSNVAELLHQVSM 447
Query: 84 GFP----RPIVLRNFKTQNILFNEENVAKWFDFLLSISIPEGETHITTDRVIGTR--GYS 137
G + V RN +N+L + AK DF LS ++ +++ T R G +
Sbjct: 448 GMKYLEEKNFVHRNLAARNVLLVNRHYAKISDFGLSKALGADDSYYTA-RSAGKWPLKWY 506
Query: 138 APEYISICVLNEKSNVFSFGAFLFELLA 165
APE I+ + +S+V+S+G ++E L+
Sbjct: 507 APECINFRKFSSRSDVWSYGVTMWEALS 534
>pdb|3TT0|A Chain A, Co-Structure Of Fibroblast Growth Factor Receptor 1 Kinase
Domain With
3-(2,6-Dichloro-3,
5-Dimethoxy-Phenyl)-1-{6-[4-(4-Ethyl-Piperazin-1-
Yl)-Phenylamino]-Pyrimidin-4-Yl}-1-Methyl-Urea (Bgj398)
pdb|3TT0|B Chain B, Co-Structure Of Fibroblast Growth Factor Receptor 1 Kinase
Domain With
3-(2,6-Dichloro-3,
5-Dimethoxy-Phenyl)-1-{6-[4-(4-Ethyl-Piperazin-1-
Yl)-Phenylamino]-Pyrimidin-4-Yl}-1-Methyl-Urea (Bgj398)
Length = 382
Score = 43.5 bits (101), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 42/178 (23%), Positives = 77/178 (43%), Gaps = 26/178 (14%)
Query: 27 SHNHILKRIGCCLQTPIPILVFQSVEYGTLRDCIFGAPLPRL------------KIASDI 74
H +I+ +G C Q ++ + G LR+ + P L +++S
Sbjct: 133 KHKNIINLLGACTQDGPLYVIVEYASKGNLREYLQARRPPGLEYSYNPSHNPEEQLSSKD 192
Query: 75 VNSLAY-----LHFGFPRPIVLRNFKTQNILFNEENVAKWFDFLLSISIPEGETHITTDR 129
+ S AY + + + + R+ +N+L E+NV K DF L+ I + + T
Sbjct: 193 LVSCAYQVARGMEYLASKKCIHRDLAARNVLVTEDNVMKIADFGLARDIHHIDYYKKTTN 252
Query: 130 VIGTRGYSAPEYISICVLNEKSNVFSFGAFLFEL--LAGRIH-------IWDLLKDTH 178
+ APE + + +S+V+SFG L+E+ L G + ++ LLK+ H
Sbjct: 253 GRLPVKWMAPEALFDRIYTHQSDVWSFGVLLWEIFTLGGSPYPGVPVEELFKLLKEGH 310
>pdb|3BZ3|A Chain A, Crystal Structure Analysis Of Focal Adhesion Kinase With A
Methanesulfonamide Diaminopyrimidine Inhibitor
Length = 276
Score = 43.5 bits (101), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 40/145 (27%), Positives = 66/145 (45%), Gaps = 10/145 (6%)
Query: 25 QMSHNHILKRIGCCLQTPIPILVFQSVEYGTLRDCI----FGAPLPRLKI-ASDIVNSLA 79
Q H HI+K IG + P+ I + + G LR + + L L + A + +LA
Sbjct: 64 QFDHPHIVKLIGVITENPVWI-IMELCTLGELRSFLQVRKYSLDLASLILYAYQLSTALA 122
Query: 80 YLHFGFPRPIVLRNFKTQNILFNEENVAKWFDFLLSISIPEGETHITTDRVIGTRGYSAP 139
YL + V R+ +N+L + + K DF LS + E T+ + + AP
Sbjct: 123 YLE---SKRFVHRDIAARNVLVSSNDCVKLGDFGLSRYM-EDSTYYKASKGKLPIKWMAP 178
Query: 140 EYISICVLNEKSNVFSFGAFLFELL 164
E I+ S+V+ FG ++E+L
Sbjct: 179 ESINFRRFTSASDVWMFGVCMWEIL 203
>pdb|4G31|A Chain A, Crystal Structure Of Gsk6414 Bound To Perk (R587-R1092,
Delete A660- T867) At 2.28 A Resolution
pdb|4G34|A Chain A, Crystal Structure Of Gsk6924 Bound To Perk (R587-R1092,
Delete A660- T867) At 2.70 A Resolution
Length = 299
Score = 43.5 bits (101), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 32/107 (29%), Positives = 50/107 (46%), Gaps = 13/107 (12%)
Query: 68 LKIASDIVNSLAYLHFGFPRPIVLRNFKTQNILFNEENVAKWFDFLLSISIPEGETHITT 127
L I I ++ +LH + ++ R+ K NI F ++V K DF L ++ + E T
Sbjct: 121 LHIFLQIAEAVEFLH---SKGLMHRDLKPSNIFFTMDDVVKVGDFGLVTAMDQDEEEQTV 177
Query: 128 ----------DRVIGTRGYSAPEYISICVLNEKSNVFSFGAFLFELL 164
+GT+ Y +PE I + K ++FS G LFELL
Sbjct: 178 LTPMPAYARHTGQVGTKLYMSPEQIHGNSYSHKVDIFSLGLILFELL 224
>pdb|2JKM|A Chain A, Focal Adhesion Kinase Catalytic Domain In Complex With
Bis- Anilino Pyrimidine Inhibitor
Length = 276
Score = 43.5 bits (101), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 40/145 (27%), Positives = 66/145 (45%), Gaps = 10/145 (6%)
Query: 25 QMSHNHILKRIGCCLQTPIPILVFQSVEYGTLRDCI----FGAPLPRLKI-ASDIVNSLA 79
Q H HI+K IG + P+ I + + G LR + + L L + A + +LA
Sbjct: 67 QFDHPHIVKLIGVITENPVWI-IMELCTLGELRSFLQVRKYSLDLASLILYAYQLSTALA 125
Query: 80 YLHFGFPRPIVLRNFKTQNILFNEENVAKWFDFLLSISIPEGETHITTDRVIGTRGYSAP 139
YL + V R+ +N+L + + K DF LS + E T+ + + AP
Sbjct: 126 YLE---SKRFVHRDIAARNVLVSSNDCVKLGDFGLSRYM-EDSTYYKASKGKLPIKWMAP 181
Query: 140 EYISICVLNEKSNVFSFGAFLFELL 164
E I+ S+V+ FG ++E+L
Sbjct: 182 ESINFRRFTSASDVWMFGVCMWEIL 206
>pdb|2R4B|A Chain A, Erbb4 Kinase Domain Complexed With A Thienopyrimidine
Inhibitor
pdb|2R4B|B Chain B, Erbb4 Kinase Domain Complexed With A Thienopyrimidine
Inhibitor
Length = 321
Score = 43.5 bits (101), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 40/148 (27%), Positives = 65/148 (43%), Gaps = 11/148 (7%)
Query: 24 AQMSHNHILKRIGCCLQTPIPILVFQSVEYGTLRDCI------FGAPLPRLKIASDIVNS 77
A M H H+++ +G CL +P LV Q + +G L + + G+ L L I
Sbjct: 95 ASMDHPHLVRLLGVCL-SPTIQLVTQLMPHGCLLEYVHEHKDNIGSQL-LLNWCVQIAKG 152
Query: 78 LAYLHFGFPRPIVLRNFKTQNILFNEENVAKWFDFLLSISIPEGETHITTDRVIGTRGYS 137
+ YL R +V R+ +N+L N K DF L+ + E D +
Sbjct: 153 MMYLE---ERRLVHRDLAARNVLVKSPNHVKITDFGLARLLEGDEKEYNADGGKMPIKWM 209
Query: 138 APEYISICVLNEKSNVFSFGAFLFELLA 165
A E I +S+V+S+G ++EL+
Sbjct: 210 ALECIHYRKFTHQSDVWSYGVTIWELMT 237
>pdb|2ETM|A Chain A, Crystal Structure Of Focal Adhesion Kinase Domain
Complexed With 7h-Pyrrolo [2,3-D] Pyrimidine Derivative
pdb|2ETM|B Chain B, Crystal Structure Of Focal Adhesion Kinase Domain
Complexed With 7h-Pyrrolo [2,3-D] Pyrimidine Derivative
pdb|2IJM|A Chain A, Crystal Structure Of Focal Adhesion Kinase Domain With 2
Molecules In The Asymmetric Unit Complexed With Adp And
Atp
pdb|2IJM|B Chain B, Crystal Structure Of Focal Adhesion Kinase Domain With 2
Molecules In The Asymmetric Unit Complexed With Adp And
Atp
Length = 281
Score = 43.5 bits (101), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 40/145 (27%), Positives = 66/145 (45%), Gaps = 10/145 (6%)
Query: 25 QMSHNHILKRIGCCLQTPIPILVFQSVEYGTLRDCI----FGAPLPRLKI-ASDIVNSLA 79
Q H HI+K IG + P+ I + + G LR + + L L + A + +LA
Sbjct: 69 QFDHPHIVKLIGVITENPVWI-IMELCTLGELRSFLQVRKYSLDLASLILYAYQLSTALA 127
Query: 80 YLHFGFPRPIVLRNFKTQNILFNEENVAKWFDFLLSISIPEGETHITTDRVIGTRGYSAP 139
YL + V R+ +N+L + + K DF LS + E T+ + + AP
Sbjct: 128 YLE---SKRFVHRDIAARNVLVSSNDCVKLGDFGLSRYM-EDSTYYKASKGKLPIKWMAP 183
Query: 140 EYISICVLNEKSNVFSFGAFLFELL 164
E I+ S+V+ FG ++E+L
Sbjct: 184 ESINFRRFTSASDVWMFGVCMWEIL 208
>pdb|2J0M|B Chain B, Crystal Structure A Two-Chain Complex Between The Ferm And
Kinase Domains Of Focal Adhesion Kinase.
pdb|2JKQ|A Chain A, Focal Adhesion Kinase Catalytic Domain In Complex With
Bis- Anilino Pyrimidine Inhibitor
Length = 276
Score = 43.5 bits (101), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 40/145 (27%), Positives = 66/145 (45%), Gaps = 10/145 (6%)
Query: 25 QMSHNHILKRIGCCLQTPIPILVFQSVEYGTLRDCI----FGAPLPRLKI-ASDIVNSLA 79
Q H HI+K IG + P+ I + + G LR + + L L + A + +LA
Sbjct: 67 QFDHPHIVKLIGVITENPVWI-IMELCTLGELRSFLQVRKYSLDLASLILYAYQLSTALA 125
Query: 80 YLHFGFPRPIVLRNFKTQNILFNEENVAKWFDFLLSISIPEGETHITTDRVIGTRGYSAP 139
YL + V R+ +N+L + + K DF LS + E T+ + + AP
Sbjct: 126 YLE---SKRFVHRDIAARNVLVSSNDCVKLGDFGLSRYM-EDSTYYKASKGKLPIKWMAP 181
Query: 140 EYISICVLNEKSNVFSFGAFLFELL 164
E I+ S+V+ FG ++E+L
Sbjct: 182 ESINFRRFTSASDVWMFGVCMWEIL 206
>pdb|2REI|A Chain A, Kinase Domain Of Human Ephrin Type-a Receptor 7 (epha7)
pdb|3DKO|A Chain A, Complex Between The Kinase Domain Of Human Ephrin Type-A
Receptor 7 (Epha7) And Inhibitor Alw-Ii-49-7
Length = 318
Score = 43.5 bits (101), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 47/152 (30%), Positives = 67/152 (44%), Gaps = 29/152 (19%)
Query: 90 VLRNFKTQNILFNEENVAKWFDFLLSISI---PEGETHITTDRVIGTRGYSAPEYISICV 146
V R+ +NIL N V K DF LS I PE + TT I R ++APE I
Sbjct: 167 VHRDLAARNILVNSNLVCKVSDFGLSRVIEDDPEA-VYTTTGGKIPVR-WTAPEAIQYRK 224
Query: 147 LNEKSNVFSFGAFLFELLA-GRIHIWDLLKDTHDHGCFFNEYLKNYLEDKRFTGIPAPII 205
S+V+S+G ++E+++ G WD+ + +K E R +PAP+
Sbjct: 225 FTSASDVWSYGIVMWEVMSYGERPYWDMSN---------QDVIKAIEEGYR---LPAPM- 271
Query: 206 VQDIPCIEKEQQLHASAQLTLECVNNSPEDRP 237
D P LH QL L+C +RP
Sbjct: 272 --DCPA-----GLH---QLMLDCWQKERAERP 293
>pdb|2WTW|A Chain A, Aurora-A Inhibitor Structure (2nd Crystal Form)
Length = 285
Score = 43.5 bits (101), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 28/96 (29%), Positives = 49/96 (51%), Gaps = 7/96 (7%)
Query: 72 SDIVNSLAYLHFGFPRPIVLRNFKTQNILFNEENVAKWFDFLLSISIPEGETHITTDRVI 131
+++ N+L+Y H + ++ R+ K +N+L K DF S+ P + TT +
Sbjct: 120 TELANALSYCH---SKRVIHRDIKPENLLLGSAGELKIADFGWSVHAPS--SRRTT--LC 172
Query: 132 GTRGYSAPEYISICVLNEKSNVFSFGAFLFELLAGR 167
GT Y PE I + +EK +++S G +E L G+
Sbjct: 173 GTLDYLPPEMIEGRMHDEKVDLWSLGVLCYEFLVGK 208
>pdb|3PXK|A Chain A, Focal Adhesion Kinase Catalytic Domain In Complex With
Pyrrolo[2,3- D]thiazole
pdb|3PXK|B Chain B, Focal Adhesion Kinase Catalytic Domain In Complex With
Pyrrolo[2,3- D]thiazole
Length = 282
Score = 43.5 bits (101), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 40/145 (27%), Positives = 66/145 (45%), Gaps = 10/145 (6%)
Query: 25 QMSHNHILKRIGCCLQTPIPILVFQSVEYGTLRDCI----FGAPLPRLKI-ASDIVNSLA 79
Q H HI+K IG + P+ I + + G LR + + L L + A + +LA
Sbjct: 70 QFDHPHIVKLIGVITENPVWI-IMELCTLGELRSFLQVRKYSLDLASLILYAYQLSTALA 128
Query: 80 YLHFGFPRPIVLRNFKTQNILFNEENVAKWFDFLLSISIPEGETHITTDRVIGTRGYSAP 139
YL + V R+ +N+L + + K DF LS + E T+ + + AP
Sbjct: 129 YLE---SKRFVHRDIAARNVLVSSNDCVKLGDFGLSRYM-EDSTYYKASKGKLPIKWMAP 184
Query: 140 EYISICVLNEKSNVFSFGAFLFELL 164
E I+ S+V+ FG ++E+L
Sbjct: 185 ESINFRRFTSASDVWMFGVCMWEIL 209
>pdb|2XNG|A Chain A, Structure Of Aurora-A Bound To A Selective Imidazopyrazine
Inhibitor
Length = 283
Score = 43.5 bits (101), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 28/96 (29%), Positives = 49/96 (51%), Gaps = 7/96 (7%)
Query: 72 SDIVNSLAYLHFGFPRPIVLRNFKTQNILFNEENVAKWFDFLLSISIPEGETHITTDRVI 131
+++ N+L+Y H + ++ R+ K +N+L K DF S+ P + TT +
Sbjct: 118 TELANALSYCH---SKRVIHRDIKPENLLLGSAGELKIADFGWSVHAPS--SRRTT--LC 170
Query: 132 GTRGYSAPEYISICVLNEKSNVFSFGAFLFELLAGR 167
GT Y PE I + +EK +++S G +E L G+
Sbjct: 171 GTLDYLPPEMIEGRMHDEKVDLWSLGVLCYEFLVGK 206
>pdb|2J50|A Chain A, Structure Of Aurora-2 In Complex With Pha-739358
pdb|2J50|B Chain B, Structure Of Aurora-2 In Complex With Pha-739358
Length = 280
Score = 43.5 bits (101), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 28/96 (29%), Positives = 49/96 (51%), Gaps = 7/96 (7%)
Query: 72 SDIVNSLAYLHFGFPRPIVLRNFKTQNILFNEENVAKWFDFLLSISIPEGETHITTDRVI 131
+++ N+L+Y H + ++ R+ K +N+L K DF S+ P + TT +
Sbjct: 115 TELANALSYCH---SKRVIHRDIKPENLLLGSAGELKIADFGWSVHAPS--SRRTT--LC 167
Query: 132 GTRGYSAPEYISICVLNEKSNVFSFGAFLFELLAGR 167
GT Y PE I + +EK +++S G +E L G+
Sbjct: 168 GTLDYLPPEMIEGRMHDEKVDLWSLGVLCYEFLVGK 203
>pdb|2X6D|A Chain A, Aurora-A Bound To An Inhibitor
pdb|2X6E|A Chain A, Aurora-A Bound To An Inhibitor
Length = 285
Score = 43.5 bits (101), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 28/96 (29%), Positives = 49/96 (51%), Gaps = 7/96 (7%)
Query: 72 SDIVNSLAYLHFGFPRPIVLRNFKTQNILFNEENVAKWFDFLLSISIPEGETHITTDRVI 131
+++ N+L+Y H + ++ R+ K +N+L K DF S+ P + TT +
Sbjct: 120 TELANALSYCH---SKRVIHRDIKPENLLLGSAGELKIADFGWSVHAPS--SRRTT--LC 172
Query: 132 GTRGYSAPEYISICVLNEKSNVFSFGAFLFELLAGR 167
GT Y PE I + +EK +++S G +E L G+
Sbjct: 173 GTLDYLPPEMIEGRMHDEKVDLWSLGVLCYEFLVGK 208
>pdb|4EBW|A Chain A, Structure Of Focal Adhesion Kinase Catalytic Domain In
Complex With Novel Allosteric Inhibitor
pdb|4EBV|A Chain A, Structure Of Focal Adhesion Kinase Catalytic Domain In
Complex With Novel Allosteric Inhibitor
Length = 304
Score = 43.5 bits (101), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 40/145 (27%), Positives = 66/145 (45%), Gaps = 10/145 (6%)
Query: 25 QMSHNHILKRIGCCLQTPIPILVFQSVEYGTLRDCI----FGAPLPRLKI-ASDIVNSLA 79
Q H HI+K IG + P+ I + + G LR + + L L + A + +LA
Sbjct: 95 QFDHPHIVKLIGVITENPVWI-IMELCTLGELRSFLQVRKYSLDLASLILYAYQLSTALA 153
Query: 80 YLHFGFPRPIVLRNFKTQNILFNEENVAKWFDFLLSISIPEGETHITTDRVIGTRGYSAP 139
YL + V R+ +N+L + + K DF LS + E T+ + + AP
Sbjct: 154 YLE---SKRFVHRDIAARNVLVSSNDCVKLGDFGLSRYM-EDSTYYKASKGKLPIKWMAP 209
Query: 140 EYISICVLNEKSNVFSFGAFLFELL 164
E I+ S+V+ FG ++E+L
Sbjct: 210 ESINFRRFTSASDVWMFGVCMWEIL 234
>pdb|1MP8|A Chain A, Crystal Structure Of Focal Adhesion Kinase (Fak)
pdb|4I4F|A Chain A, Structure Of Focal Adhesion Kinase Catalytic Domain In
Complex With An Allosteric Binding Pyrazolobenzothiazine
Compound
Length = 281
Score = 43.5 bits (101), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 40/145 (27%), Positives = 66/145 (45%), Gaps = 10/145 (6%)
Query: 25 QMSHNHILKRIGCCLQTPIPILVFQSVEYGTLRDCI----FGAPLPRLKI-ASDIVNSLA 79
Q H HI+K IG + P+ I + + G LR + + L L + A + +LA
Sbjct: 72 QFDHPHIVKLIGVITENPVWI-IMELCTLGELRSFLQVRKYSLDLASLILYAYQLSTALA 130
Query: 80 YLHFGFPRPIVLRNFKTQNILFNEENVAKWFDFLLSISIPEGETHITTDRVIGTRGYSAP 139
YL + V R+ +N+L + + K DF LS + E T+ + + AP
Sbjct: 131 YLE---SKRFVHRDIAARNVLVSSNDCVKLGDFGLSRYM-EDSTYYKASKGKLPIKWMAP 186
Query: 140 EYISICVLNEKSNVFSFGAFLFELL 164
E I+ S+V+ FG ++E+L
Sbjct: 187 ESINFRRFTSASDVWMFGVCMWEIL 211
>pdb|1MQ4|A Chain A, Crystal Structure Of Aurora-A Protein Kinase
pdb|2NP8|A Chain A, Structural Basis For The Inhibition Of Aurora A Kinase By
A Novel Class Of High Affinity Disubstituted Pyrimidine
Inhibitors
pdb|2X81|A Chain A, Structure Of Aurora A In Complex With Mln8054
pdb|3MYG|A Chain A, Aurora A Kinase Complexed With Sch 1473759
pdb|3VAP|A Chain A, Synthesis And Sar Studies Of Imidazo-[1,2-A]-Pyrazine
Aurora Kinase Inhibitors With Improved Off Target Kinase
Selectivity
Length = 272
Score = 43.1 bits (100), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 28/96 (29%), Positives = 49/96 (51%), Gaps = 7/96 (7%)
Query: 72 SDIVNSLAYLHFGFPRPIVLRNFKTQNILFNEENVAKWFDFLLSISIPEGETHITTDRVI 131
+++ N+L+Y H + ++ R+ K +N+L K DF S+ P + TT +
Sbjct: 119 TELANALSYCH---SKRVIHRDIKPENLLLGSAGELKIADFGWSVHAPS--SRRTT--LC 171
Query: 132 GTRGYSAPEYISICVLNEKSNVFSFGAFLFELLAGR 167
GT Y PE I + +EK +++S G +E L G+
Sbjct: 172 GTLDYLPPEMIEGRMHDEKVDLWSLGVLCYEFLVGK 207
>pdb|2XRU|A Chain A, Aurora-A T288e Complexed With Pha-828300
Length = 280
Score = 43.1 bits (100), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 26/96 (27%), Positives = 46/96 (47%), Gaps = 7/96 (7%)
Query: 72 SDIVNSLAYLHFGFPRPIVLRNFKTQNILFNEENVAKWFDFLLSISIPEGETHITTDRVI 131
+++ N+L+Y H + ++ R+ K +N+L K DF S+ P +
Sbjct: 115 TELANALSYCH---SKRVIHRDIKPENLLLGSAGELKIADFGWSVHAPSSRR----TELC 167
Query: 132 GTRGYSAPEYISICVLNEKSNVFSFGAFLFELLAGR 167
GT Y PE I + +EK +++S G +E L G+
Sbjct: 168 GTLDYLPPEMIEGRMHDEKVDLWSLGVLCYEFLVGK 203
>pdb|1MUO|A Chain A, Crystal Structure Of Aurora-2, An Oncogenic Serine-
Threonine Kinase
Length = 297
Score = 43.1 bits (100), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 28/96 (29%), Positives = 49/96 (51%), Gaps = 7/96 (7%)
Query: 72 SDIVNSLAYLHFGFPRPIVLRNFKTQNILFNEENVAKWFDFLLSISIPEGETHITTDRVI 131
+++ N+L+Y H + ++ R+ K +N+L K DF S+ P + TT +
Sbjct: 132 TELANALSYCH---SKRVIHRDIKPENLLLGSAGELKIADFGWSVHAPS--SRRTT--LC 184
Query: 132 GTRGYSAPEYISICVLNEKSNVFSFGAFLFELLAGR 167
GT Y PE I + +EK +++S G +E L G+
Sbjct: 185 GTLDYLPPEMIEGRMHDEKVDLWSLGVLCYEFLVGK 220
>pdb|2J4Z|A Chain A, Structure Of Aurora-2 In Complex With Pha-680626
pdb|2J4Z|B Chain B, Structure Of Aurora-2 In Complex With Pha-680626
Length = 306
Score = 43.1 bits (100), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 28/96 (29%), Positives = 49/96 (51%), Gaps = 7/96 (7%)
Query: 72 SDIVNSLAYLHFGFPRPIVLRNFKTQNILFNEENVAKWFDFLLSISIPEGETHITTDRVI 131
+++ N+L+Y H + ++ R+ K +N+L K DF S+ P + TT +
Sbjct: 141 TELANALSYCH---SKRVIHRDIKPENLLLGSAGELKIADFGWSVHAPS--SRRTT--LC 193
Query: 132 GTRGYSAPEYISICVLNEKSNVFSFGAFLFELLAGR 167
GT Y PE I + +EK +++S G +E L G+
Sbjct: 194 GTLDYLPPEMIEGRMHDEKVDLWSLGVLCYEFLVGK 229
>pdb|3O50|A Chain A, Crystal Structure Of Benzamide 9 Bound To Auroraa
pdb|3O50|B Chain B, Crystal Structure Of Benzamide 9 Bound To Auroraa
pdb|3O51|A Chain A, Crystal Structure Of Anthranilamide 10 Bound To Auroraa
pdb|3EFW|A Chain A, Structure Of Auroraa With Pyridyl-Pyrimidine Urea
Inhibitor
pdb|3EFW|B Chain B, Structure Of Auroraa With Pyridyl-Pyrimidine Urea
Inhibitor
Length = 267
Score = 43.1 bits (100), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 28/96 (29%), Positives = 49/96 (51%), Gaps = 7/96 (7%)
Query: 72 SDIVNSLAYLHFGFPRPIVLRNFKTQNILFNEENVAKWFDFLLSISIPEGETHITTDRVI 131
+++ N+L+Y H + ++ R+ K +N+L K DF S+ P + TT +
Sbjct: 114 TELANALSYCH---SKRVIHRDIKPENLLLGSAGELKIADFGWSVHAPS--SRRTT--LC 166
Query: 132 GTRGYSAPEYISICVLNEKSNVFSFGAFLFELLAGR 167
GT Y PE I + +EK +++S G +E L G+
Sbjct: 167 GTLDYLPPEMIEGRMHDEKVDLWSLGVLCYEFLVGK 202
>pdb|3QD2|B Chain B, Crsytal Structure Of Mouse Perk Kinase Domain
Length = 332
Score = 43.1 bits (100), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 32/107 (29%), Positives = 51/107 (47%), Gaps = 13/107 (12%)
Query: 68 LKIASDIVNSLAYLHFGFPRPIVLRNFKTQNILFNEENVAKWFDFLLSISIPEGE----- 122
L I I ++ +LH + ++ R+ K NI F ++V K DF L ++ + E
Sbjct: 167 LHIFIQIAEAVEFLH---SKGLMHRDLKPSNIFFTMDDVVKVGDFGLVTAMDQDEEEQTV 223
Query: 123 -----THITTDRVIGTRGYSAPEYISICVLNEKSNVFSFGAFLFELL 164
+ T +GT+ Y +PE I + K ++FS G LFELL
Sbjct: 224 LTPMPAYATHXGQVGTKLYMSPEQIHGNNYSHKVDIFSLGLILFELL 270
>pdb|3KUL|B Chain B, Kinase Domain Of Human Ephrin Type-A Receptor 8 (Epha8)
Length = 325
Score = 43.1 bits (100), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 54/235 (22%), Positives = 95/235 (40%), Gaps = 47/235 (20%)
Query: 17 INNITYAAQMSHNHILKRIGCCLQTPIPILVFQSVEYGTL------RDCIFG-----APL 65
++ + Q H +I++ G + + ++V + +E G+L D F L
Sbjct: 98 LSEASIMGQFDHPNIIRLEGVVTRGRLAMIVTEYMENGSLDTFLRTHDGQFTIMQLVGML 157
Query: 66 PRLKIASDIVNSLAYLHFGFPRPIVLRNFKTQNILFNEENVAKWFDFLLSISIPEG--ET 123
+ ++ L Y+H R+ +N+L + V K DF LS + +
Sbjct: 158 RGVGAGMRYLSDLGYVH---------RDLAARNVLVDSNLVCKVSDFGLSRVLEDDPDAA 208
Query: 124 HITTDRVIGTRGYSAPEYISICVLNEKSNVFSFGAFLFELLA-GRIHIWDLLKDTHDHGC 182
TT I R ++APE I+ + S+V+SFG ++E+LA G W++
Sbjct: 209 XTTTGGKIPIR-WTAPEAIAFRTFSSASDVWSFGVVMWEVLAYGERPYWNMTN------- 260
Query: 183 FFNEYLKNYLEDKRFTGIPAPIIVQDIPCIEKEQQLHASAQLTLECVNNSPEDRP 237
+ + + E R +PAP+ HA QL L+C + RP
Sbjct: 261 --RDVISSVEEGYR---LPAPMGCP-----------HALHQLMLDCWHKDRAQRP 299
>pdb|4ASZ|A Chain A, Crystal Structure Of Apo Trkb Kinase Domain
pdb|4AT3|A Chain A, Crystal Structure Of Trkb Kinase Domain In Complex With
Cpd5n
pdb|4AT4|A Chain A, Crystal Structure Of Trkb Kinase Domain In Complex With
Ex429
pdb|4AT5|A Chain A, Crystal Structure Of Trkb Kinase Domain In Complex With
Gw2580
Length = 299
Score = 43.1 bits (100), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 42/166 (25%), Positives = 67/166 (40%), Gaps = 26/166 (15%)
Query: 26 MSHNHILKRIGCCLQTPIPILVFQSVEYGTLR--------DCIF---GAPLPRLK----- 69
+ H HI+K G C++ I+VF+ +++G L D + G P L
Sbjct: 72 LQHEHIVKFYGVCVEGDPLIMVFEYMKHGDLNKFLRAHGPDAVLMAEGNPPTELTQSQML 131
Query: 70 -IASDIVNSLAYL---HFGFPRPIVLRNFKTQNILFNEENVAKWFDFLLSISIPEGETHI 125
IA I + YL HF V R+ T+N L E + K DF +S + + +
Sbjct: 132 HIAQQIAAGMVYLASQHF------VHRDLATRNCLVGENLLVKIGDFGMSRDVYSTDYYR 185
Query: 126 TTDRVIGTRGYSAPEYISICVLNEKSNVFSFGAFLFELLAGRIHIW 171
+ + PE I +S+V+S G L+E+ W
Sbjct: 186 VGGHTMLPIRWMPPESIMYRKFTTESDVWSLGVVLWEIFTYGKQPW 231
>pdb|2H6D|A Chain A, Protein Kinase Domain Of The Human 5'-Amp-Activated
Protein Kinase Catalytic Subunit Alpha-2 (Ampk Alpha-2
Chain)
Length = 276
Score = 43.1 bits (100), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 51/186 (27%), Positives = 81/186 (43%), Gaps = 18/186 (9%)
Query: 14 GSCINNITYAAQMSHNHILKRIGCCLQTPIPI-LVFQSVEYGTLRD--CIFG--APLPRL 68
G I H HI+K + + TP +V + V G L D C G +
Sbjct: 56 GKIKREIQNLKLFRHPHIIK-LYQVISTPTDFFMVMEYVSGGELFDYICKHGRVEEMEAR 114
Query: 69 KIASDIVNSLAYLHFGFPRPIVLRNFKTQNILFNEENVAKWFDFLLSISIPEGETHITTD 128
++ I++++ Y H +V R+ K +N+L + AK DF LS + +GE T+
Sbjct: 115 RLFQQILSAVDYCHRHM---VVHRDLKPENVLLDAHMNAKIADFGLSNMMSDGEFLRTS- 170
Query: 129 RVIGTRGYSAPEYIS-ICVLNEKSNVFSFGAFLFELLAGRI-----HIWDLLKDTHDHGC 182
G+ Y+APE IS + +++S G L+ LL G + H+ L K
Sbjct: 171 --CGSPNYAAPEVISGRLYAGPEVDIWSCGVILYALLCGTLPFDDEHVPTLFKKIRGGVF 228
Query: 183 FFNEYL 188
+ EYL
Sbjct: 229 YIPEYL 234
>pdb|2W1D|A Chain A, Structure Determination Of Aurora Kinase In Complex With
Inhibitor
pdb|2W1E|A Chain A, Structure Determination Of Aurora Kinase In Complex With
Inhibitor
pdb|2W1F|A Chain A, Structure Determination Of Aurora Kinase In Complex With
Inhibitor
Length = 275
Score = 43.1 bits (100), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 28/96 (29%), Positives = 49/96 (51%), Gaps = 7/96 (7%)
Query: 72 SDIVNSLAYLHFGFPRPIVLRNFKTQNILFNEENVAKWFDFLLSISIPEGETHITTDRVI 131
+++ N+L+Y H + ++ R+ K +N+L K DF S+ P + TT +
Sbjct: 118 TELANALSYCH---SKRVIHRDIKPENLLLGSAGELKIADFGWSVHAPS--SRRTT--LC 170
Query: 132 GTRGYSAPEYISICVLNEKSNVFSFGAFLFELLAGR 167
GT Y PE I + +EK +++S G +E L G+
Sbjct: 171 GTLDYLPPEMIEGRMHDEKVDLWSLGVLCYEFLVGK 206
>pdb|2WQE|A Chain A, Structure Of S155r Aurora-A Somatic Mutant
Length = 262
Score = 43.1 bits (100), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 28/96 (29%), Positives = 48/96 (50%), Gaps = 7/96 (7%)
Query: 72 SDIVNSLAYLHFGFPRPIVLRNFKTQNILFNEENVAKWFDFLLSISIPEGETHITTDRVI 131
+++ N+L+Y H + ++ R+ K +N+L K DF S+ P TT +
Sbjct: 112 TELANALSYCH---SKRVIHRDIKPENLLLGSAGELKIADFGWSVHAPSSRR--TT--LC 164
Query: 132 GTRGYSAPEYISICVLNEKSNVFSFGAFLFELLAGR 167
GT Y PE I + +EK +++S G +E L G+
Sbjct: 165 GTLDYLPPEMIEGRMHDEKVDLWSLGVLCYEFLVGK 200
>pdb|3CJF|A Chain A, Crystal Structure Of Vegfr2 In Complex With A
3,4,5-Trimethoxy Aniline Containing Pyrimidine
Length = 309
Score = 43.1 bits (100), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 43/158 (27%), Positives = 66/158 (41%), Gaps = 21/158 (13%)
Query: 81 LHFGFPRPIVLRNFKTQNILFNEENVAKWFDFLLSISIPEGETHITTDRVIGTRGYSAPE 140
+ F R + R+ +NIL +E+NV K DF L+ I + ++ + APE
Sbjct: 157 MEFLASRKXIHRDLAARNILLSEKNVVKIXDFGLARDIYKDPDYVRKGDARLPLKWMAPE 216
Query: 141 YISICVLNEKSNVFSFGAFLFELLAGRIHIWDLLKDTHDHGCFFNEYLKNYLEDKRFTGI 200
I V +S+V+SFG L+E+ + L + G +E L K T +
Sbjct: 217 TIFDRVYTIQSDVWSFGVLLWEIFS--------LGASPYPGVKIDEEFXRRL--KEGTRM 266
Query: 201 PAPIIVQDIPCIEKEQQLHASAQLTLECVNNSPEDRPT 238
AP D E Q + L+C + P RPT
Sbjct: 267 RAP----DYTTPEMYQTM-------LDCWHGEPSQRPT 293
>pdb|2Z8C|A Chain A, Phosphorylated Insulin Receptor Tyrosine Kinase In Complex
With (4-{[5-Carbamoyl-4-(3-Methylanilino)pyrimidin-2-
Yl]amino}phenyl)acetic Acid
Length = 303
Score = 43.1 bits (100), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 33/163 (20%), Positives = 74/163 (45%), Gaps = 17/163 (10%)
Query: 17 INNITYAAQMSHNHILKRIGCCLQTPIPILVFQSVEYGTLRDCIF----------GAPLP 66
+N + + +H+++ +G + ++V + + +G L+ + G P P
Sbjct: 65 LNEASVMKGFTCHHVVRLLGVVSKGQPTLVVMELMAHGDLKSYLRSLRPEAENNPGRPPP 124
Query: 67 RLK----IASDIVNSLAYLHFGFPRPIVLRNFKTQNILFNEENVAKWFDFLLSISIPEGE 122
L+ +A++I + +AYL+ + V R+ +N + + K DF ++ I E +
Sbjct: 125 TLQEMIQMAAEIADGMAYLN---AKKFVHRDLAARNCMVAHDFTVKIGDFGMTRDIXETD 181
Query: 123 THITTDRVIGTRGYSAPEYISICVLNEKSNVFSFGAFLFELLA 165
+ + + APE + V S+++SFG L+E+ +
Sbjct: 182 XXRKGGKGLLPVRWMAPESLKDGVFTTSSDMWSFGVVLWEITS 224
>pdb|3GQI|A Chain A, Crystal Structure Of Activated Receptor Tyrosine Kinase In
Complex With Substrates
Length = 326
Score = 43.1 bits (100), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 36/154 (23%), Positives = 66/154 (42%), Gaps = 17/154 (11%)
Query: 27 SHNHILKRIGCCLQTPIPILVFQSVEYGTLRDCIFGAPLPRL------------KIASDI 74
H +I+ +G C Q ++ + G LR+ + P L +++S
Sbjct: 92 KHKNIINLLGACTQDGPLYVIVEYASKGNLREYLQARRPPGLEFSFNPSHNPEEQLSSKD 151
Query: 75 VNSLAY-----LHFGFPRPIVLRNFKTQNILFNEENVAKWFDFLLSISIPEGETHITTDR 129
+ S AY + + + + R+ +N+L E+NV K DF L+ I + T
Sbjct: 152 LVSCAYQVARGMEYLASKKCIHRDLAARNVLVTEDNVMKIADFGLARDIHHIDXXKKTTN 211
Query: 130 VIGTRGYSAPEYISICVLNEKSNVFSFGAFLFEL 163
+ APE + + +S+V+SFG L+E+
Sbjct: 212 GRLPVKWMAPEALFDRIYTHQSDVWSFGVLLWEI 245
>pdb|2IVS|A Chain A, Crystal Structure Of Non-Phosphorylated Ret Tyrosine
Kinase Domain
pdb|2IVS|B Chain B, Crystal Structure Of Non-Phosphorylated Ret Tyrosine
Kinase Domain
Length = 314
Score = 43.1 bits (100), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 38/166 (22%), Positives = 71/166 (42%), Gaps = 27/166 (16%)
Query: 25 QMSHNHILKRIGCCLQTPIPILVFQSVEYGTLRDCI---------------------FGA 63
Q++H H++K G C Q +L+ + +YG+LR +
Sbjct: 82 QVNHPHVIKLYGACSQDGPLLLIVEYAKYGSLRGFLRESRKVGPGYLGSGGSRNSSSLDH 141
Query: 64 PLPRLKIASDIVNSLAY-----LHFGFPRPIVLRNFKTQNILFNEENVAKWFDFLLSISI 118
P R D++ S A+ + + +V R+ +NIL E K DF LS +
Sbjct: 142 PDERALTMGDLI-SFAWQISQGMQYLAEMKLVHRDLAARNILVAEGRKMKISDFGLSRDV 200
Query: 119 PEGETHITTDRVIGTRGYSAPEYISICVLNEKSNVFSFGAFLFELL 164
E ++++ + + A E + + +S+V+SFG L+E++
Sbjct: 201 YEEDSYVKRSQGRIPVKWMAIESLFDHIYTTQSDVWSFGVLLWEIV 246
>pdb|3COH|A Chain A, Crystal Structure Of Aurora-A In Complex With A
Pentacyclic Inhibitor
pdb|3COH|B Chain B, Crystal Structure Of Aurora-A In Complex With A
Pentacyclic Inhibitor
Length = 268
Score = 43.1 bits (100), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 26/96 (27%), Positives = 46/96 (47%), Gaps = 7/96 (7%)
Query: 72 SDIVNSLAYLHFGFPRPIVLRNFKTQNILFNEENVAKWFDFLLSISIPEGETHITTDRVI 131
+++ N+L+Y H + ++ R+ K +N+L K DF S+ P +
Sbjct: 115 TELANALSYCH---SKKVIHRDIKPENLLLGSAGELKIADFGWSVHAPSSRRAA----LC 167
Query: 132 GTRGYSAPEYISICVLNEKSNVFSFGAFLFELLAGR 167
GT Y PE I + +EK +++S G +E L G+
Sbjct: 168 GTLDYLPPEMIEGRMHDEKVDLWSLGVLCYEFLVGK 203
>pdb|2WTV|A Chain A, Aurora-A Inhibitor Structure
pdb|2WTV|B Chain B, Aurora-A Inhibitor Structure
pdb|2WTV|C Chain C, Aurora-A Inhibitor Structure
pdb|2WTV|D Chain D, Aurora-A Inhibitor Structure
Length = 285
Score = 43.1 bits (100), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 26/96 (27%), Positives = 46/96 (47%), Gaps = 7/96 (7%)
Query: 72 SDIVNSLAYLHFGFPRPIVLRNFKTQNILFNEENVAKWFDFLLSISIPEGETHITTDRVI 131
+++ N+L+Y H + ++ R+ K +N+L K DF S+ P +
Sbjct: 120 TELANALSYCH---SKRVIHRDIKPENLLLGSAGELKIADFGWSVHAPSSRRXX----LX 172
Query: 132 GTRGYSAPEYISICVLNEKSNVFSFGAFLFELLAGR 167
GT Y PE I + +EK +++S G +E L G+
Sbjct: 173 GTLDYLPPEMIEGRMHDEKVDLWSLGVLCYEFLVGK 208
>pdb|2Z7Q|A Chain A, Crystal Structure Of The N-Terminal Kinase Domain Of Human
Rsk-1 Bound To Amp-Pcp
pdb|2Z7R|A Chain A, Crystal Structure Of The N-Terminal Kinase Domain Of Human
Rsk1 Bound To Staurosporine
pdb|2Z7S|A Chain A, Crystal Structure Of The N-Terminal Kinase Domain Of Human
Rsk1 Bound To Purvalnol A
Length = 321
Score = 43.1 bits (100), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 26/80 (32%), Positives = 42/80 (52%), Gaps = 2/80 (2%)
Query: 89 IVLRNFKTQNILFNEENVAKWFDFLLSISIPEGETHITTDRVIGTRGYSAPEYISICVLN 148
I+ R+ K +NIL +EE K DF LS + E + GT Y APE ++ +
Sbjct: 151 IIYRDLKPENILLDEEGHIKLTDFGLSKEAIDHEKKAYS--FCGTVEYMAPEVVNRQGHS 208
Query: 149 EKSNVFSFGAFLFELLAGRI 168
++ +S+G +FE+L G +
Sbjct: 209 HSADWWSYGVLMFEMLTGSL 228
>pdb|1IR3|A Chain A, Phosphorylated Insulin Receptor Tyrosine Kinase In Complex
With Peptide Substrate And Atp Analog
pdb|1GAG|A Chain A, Crystal Structure Of The Insulin Receptor Kinase In
Complex With A Bisubstrate Inhibitor
Length = 306
Score = 43.1 bits (100), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 33/163 (20%), Positives = 74/163 (45%), Gaps = 17/163 (10%)
Query: 17 INNITYAAQMSHNHILKRIGCCLQTPIPILVFQSVEYGTLRDCIF----------GAPLP 66
+N + + +H+++ +G + ++V + + +G L+ + G P P
Sbjct: 68 LNEASVMKGFTCHHVVRLLGVVSKGQPTLVVMELMAHGDLKSYLRSLRPEAENNPGRPPP 127
Query: 67 RLK----IASDIVNSLAYLHFGFPRPIVLRNFKTQNILFNEENVAKWFDFLLSISIPEGE 122
L+ +A++I + +AYL+ + V R+ +N + + K DF ++ I E +
Sbjct: 128 TLQEMIQMAAEIADGMAYLN---AKKFVHRDLAARNCMVAHDFTVKIGDFGMTRDIXETD 184
Query: 123 THITTDRVIGTRGYSAPEYISICVLNEKSNVFSFGAFLFELLA 165
+ + + APE + V S+++SFG L+E+ +
Sbjct: 185 XXRKGGKGLLPVRWMAPESLKDGVFTTSSDMWSFGVVLWEITS 227
>pdb|1RQQ|A Chain A, Crystal Structure Of The Insulin Receptor Kinase In
Complex With The Sh2 Domain Of Aps
pdb|1RQQ|B Chain B, Crystal Structure Of The Insulin Receptor Kinase In
Complex With The Sh2 Domain Of Aps
pdb|2AUH|A Chain A, Crystal Structure Of The Grb14 Bps Region In Complex With
The Insulin Receptor Tyrosine Kinase
pdb|2B4S|B Chain B, Crystal Structure Of A Complex Between Ptp1b And The
Insulin Receptor Tyrosine Kinase
pdb|2B4S|D Chain D, Crystal Structure Of A Complex Between Ptp1b And The
Insulin Receptor Tyrosine Kinase
pdb|3BU3|A Chain A, Crystal Structure Of The Insulin Receptor Kinase In
Complex With Irs2 Krlb Peptide
pdb|3BU5|A Chain A, Crystal Structure Of The Insulin Receptor Kinase In
Complex With Irs2 Krlb Peptide And Atp
pdb|3BU6|A Chain A, Crystal Structure Of The Insulin Receptor Kinase In
Complex With Irs2 Krlb Phosphopeptide
Length = 306
Score = 43.1 bits (100), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 33/163 (20%), Positives = 74/163 (45%), Gaps = 17/163 (10%)
Query: 17 INNITYAAQMSHNHILKRIGCCLQTPIPILVFQSVEYGTLRDCIF----------GAPLP 66
+N + + +H+++ +G + ++V + + +G L+ + G P P
Sbjct: 68 LNEASVMKGFTCHHVVRLLGVVSKGQPTLVVMELMAHGDLKSYLRSLRPEAENNPGRPPP 127
Query: 67 RLK----IASDIVNSLAYLHFGFPRPIVLRNFKTQNILFNEENVAKWFDFLLSISIPEGE 122
L+ +A++I + +AYL+ + V R+ +N + + K DF ++ I E +
Sbjct: 128 TLQEMIQMAAEIADGMAYLN---AKKFVHRDLAARNCMVAHDFTVKIGDFGMTRDIXETD 184
Query: 123 THITTDRVIGTRGYSAPEYISICVLNEKSNVFSFGAFLFELLA 165
+ + + APE + V S+++SFG L+E+ +
Sbjct: 185 XXRKGGKGLLPVRWMAPESLKDGVFTTSSDMWSFGVVLWEITS 227
>pdb|1OL5|A Chain A, Structure Of Aurora-A 122-403, Phosphorylated On Thr287,
Thr288 And Bound To Tpx2 1-43
pdb|1OL7|A Chain A, Structure Of Human Aurora-A 122-403 Phosphorylated On
Thr287, Thr288
Length = 282
Score = 43.1 bits (100), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 26/96 (27%), Positives = 46/96 (47%), Gaps = 7/96 (7%)
Query: 72 SDIVNSLAYLHFGFPRPIVLRNFKTQNILFNEENVAKWFDFLLSISIPEGETHITTDRVI 131
+++ N+L+Y H + ++ R+ K +N+L K DF S+ P +
Sbjct: 117 TELANALSYCH---SKRVIHRDIKPENLLLGSAGELKIADFGWSVHAPSSRRXX----LC 169
Query: 132 GTRGYSAPEYISICVLNEKSNVFSFGAFLFELLAGR 167
GT Y PE I + +EK +++S G +E L G+
Sbjct: 170 GTLDYLPPEMIEGRMHDEKVDLWSLGVLCYEFLVGK 205
>pdb|2XIR|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With Pf-00337210 (N,2-Dimethyl-6-(7-(2-Morpholinoethoxy)
Quinolin-4-Yloxy)benzofuran-3-Carboxamide)
pdb|4AG8|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With Axitinib (Ag-013736)
(N-Methyl-2-(3-((E)-2-Pyridin-2-
Yl-Vinyl)-1h-Indazol-6-Ylsulfanyl)-Benzamide)
Length = 316
Score = 42.7 bits (99), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 26/85 (30%), Positives = 43/85 (50%)
Query: 81 LHFGFPRPIVLRNFKTQNILFNEENVAKWFDFLLSISIPEGETHITTDRVIGTRGYSAPE 140
+ F R + R+ +NIL +E+NV K DF L+ I + ++ + APE
Sbjct: 161 MEFLASRKCIHRDLAARNILLSEKNVVKICDFGLARDIYKDPDYVRKGDARLPLKWMAPE 220
Query: 141 YISICVLNEKSNVFSFGAFLFELLA 165
I V +S+V+SFG L+E+ +
Sbjct: 221 TIFDRVYTIQSDVWSFGVLLWEIFS 245
>pdb|3VNT|A Chain A, Crystal Structure Of The Kinase Domain Of Human Vegfr2
With A [1, 3]thiazolo[5,4-B]pyridine Derivative
Length = 318
Score = 42.7 bits (99), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 26/85 (30%), Positives = 43/85 (50%)
Query: 81 LHFGFPRPIVLRNFKTQNILFNEENVAKWFDFLLSISIPEGETHITTDRVIGTRGYSAPE 140
+ F R + R+ +NIL +E+NV K DF L+ I + ++ + APE
Sbjct: 163 MEFLASRKCIHRDLAARNILLSEKNVVKICDFGLARDIYKDPDYVRKGDARLPLKWMAPE 222
Query: 141 YISICVLNEKSNVFSFGAFLFELLA 165
I V +S+V+SFG L+E+ +
Sbjct: 223 TIFDRVYTIQSDVWSFGVLLWEIFS 247
>pdb|3NRM|A Chain A, Imidazo[1,2-A]pyrazine-Based Aurora Kinase Inhibitors
Length = 283
Score = 42.7 bits (99), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 26/96 (27%), Positives = 46/96 (47%), Gaps = 7/96 (7%)
Query: 72 SDIVNSLAYLHFGFPRPIVLRNFKTQNILFNEENVAKWFDFLLSISIPEGETHITTDRVI 131
+++ N+L+Y H + ++ R+ K +N+L K DF S+ P +
Sbjct: 118 TELANALSYCH---SKRVIHRDIKPENLLLGSAGELKIADFGWSVHAPSSRRAA----LC 170
Query: 132 GTRGYSAPEYISICVLNEKSNVFSFGAFLFELLAGR 167
GT Y PE I + +EK +++S G +E L G+
Sbjct: 171 GTLDYLPPEMIEGRMHDEKVDLWSLGVLCYEFLVGK 206
>pdb|2W1C|A Chain A, Structure Determination Of Aurora Kinase In Complex With
Inhibitor
pdb|2W1G|A Chain A, Structure Determination Of Aurora Kinase In Complex With
Inhibitor
Length = 275
Score = 42.7 bits (99), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 26/96 (27%), Positives = 46/96 (47%), Gaps = 7/96 (7%)
Query: 72 SDIVNSLAYLHFGFPRPIVLRNFKTQNILFNEENVAKWFDFLLSISIPEGETHITTDRVI 131
+++ N+L+Y H + ++ R+ K +N+L K DF S+ P +
Sbjct: 118 TELANALSYCH---SKRVIHRDIKPENLLLGSAGELKIADFGWSVHAPSSRRXX----LC 170
Query: 132 GTRGYSAPEYISICVLNEKSNVFSFGAFLFELLAGR 167
GT Y PE I + +EK +++S G +E L G+
Sbjct: 171 GTLDYLPPEMIEGRMHDEKVDLWSLGVLCYEFLVGK 206
>pdb|3HA6|A Chain A, Crystal Structure Of Aurora A In Complex With Tpx2 And
Compound 10
Length = 268
Score = 42.7 bits (99), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 26/96 (27%), Positives = 46/96 (47%), Gaps = 7/96 (7%)
Query: 72 SDIVNSLAYLHFGFPRPIVLRNFKTQNILFNEENVAKWFDFLLSISIPEGETHITTDRVI 131
+++ N+L+Y H + ++ R+ K +N+L K DF S+ P +
Sbjct: 115 TELANALSYCH---SKRVIHRDIKPENLLLGSAGELKIADFGWSVHAPSSRRXX----LC 167
Query: 132 GTRGYSAPEYISICVLNEKSNVFSFGAFLFELLAGR 167
GT Y PE I + +EK +++S G +E L G+
Sbjct: 168 GTLDYLPPEMIEGRMHDEKVDLWSLGVLCYEFLVGK 203
>pdb|3ETA|A Chain A, Kinase Domain Of Insulin Receptor Complexed With A Pyrrolo
Pyridine Inhibitor
pdb|3ETA|B Chain B, Kinase Domain Of Insulin Receptor Complexed With A Pyrrolo
Pyridine Inhibitor
Length = 317
Score = 42.7 bits (99), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 33/163 (20%), Positives = 75/163 (46%), Gaps = 17/163 (10%)
Query: 17 INNITYAAQMSHNHILKRIGCCLQTPIPILVFQSVEYGTLRDCIF----------GAPLP 66
+N + + +H+++ +G + ++V + + +G L+ + G P P
Sbjct: 67 LNEASVMKGFTCHHVVRLLGVVSKGQPTLVVMELMAHGDLKSYLRSLRPEAENNPGRPPP 126
Query: 67 RLK----IASDIVNSLAYLHFGFPRPIVLRNFKTQNILFNEENVAKWFDFLLSISIPEGE 122
L+ +A++I + +AYL+ + V R+ +N + + K DF ++ I E +
Sbjct: 127 TLQEMIQMAAEIADGMAYLN---AKKFVHRDLAARNCMVAHDFTVKIGDFGMTRDIYETD 183
Query: 123 THITTDRVIGTRGYSAPEYISICVLNEKSNVFSFGAFLFELLA 165
+ + + + APE + V S+++SFG L+E+ +
Sbjct: 184 YYRKGGKGLLPVRWMAPESLKDGVFTTSSDMWSFGVVLWEITS 226
>pdb|1Y6A|A Chain A, Crystal Structure Of Vegfr2 In Complex With A
2-Anilino-5-Aryl-Oxazole Inhibitor
pdb|1Y6B|A Chain A, Crystal Structure Of Vegfr2 In Complex With A
2-Anilino-5-Aryl-Oxazole Inhibitor
Length = 366
Score = 42.7 bits (99), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 26/85 (30%), Positives = 43/85 (50%)
Query: 81 LHFGFPRPIVLRNFKTQNILFNEENVAKWFDFLLSISIPEGETHITTDRVIGTRGYSAPE 140
+ F R + R+ +NIL +E+NV K DF L+ I + ++ + APE
Sbjct: 211 MEFLASRKCIHRDLAARNILLSEKNVVKICDFGLARDIYKDPDYVRKGDARLPLKWMAPE 270
Query: 141 YISICVLNEKSNVFSFGAFLFELLA 165
I V +S+V+SFG L+E+ +
Sbjct: 271 TIFDRVYTIQSDVWSFGVLLWEIFS 295
>pdb|1IRK|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of The
Human Insulin Receptor
Length = 306
Score = 42.7 bits (99), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 33/163 (20%), Positives = 75/163 (46%), Gaps = 17/163 (10%)
Query: 17 INNITYAAQMSHNHILKRIGCCLQTPIPILVFQSVEYGTLRDCIF----------GAPLP 66
+N + + +H+++ +G + ++V + + +G L+ + G P P
Sbjct: 68 LNEASVMKGFTCHHVVRLLGVVSKGQPTLVVMELMAHGDLKSYLRSLRPEAENNPGRPPP 127
Query: 67 RLK----IASDIVNSLAYLHFGFPRPIVLRNFKTQNILFNEENVAKWFDFLLSISIPEGE 122
L+ +A++I + +AYL+ + V R+ +N + + K DF ++ I E +
Sbjct: 128 TLQEMIQMAAEIADGMAYLN---AKKFVHRDLAARNCMVAHDFTVKIGDFGMTRDIYETD 184
Query: 123 THITTDRVIGTRGYSAPEYISICVLNEKSNVFSFGAFLFELLA 165
+ + + + APE + V S+++SFG L+E+ +
Sbjct: 185 YYRKGGKGLLPVRWMAPESLKDGVFTTSSDMWSFGVVLWEITS 227
>pdb|2I0V|A Chain A, C-Fms Tyrosine Kinase In Complex With A Quinolone
Inhibitor
pdb|2I0Y|A Chain A, Cfms Tyrosine Kinase (Fgf Kid) In Complex With An
Arylamide Inhibitor
pdb|3DPK|A Chain A, Cfms Tyrosine Kinase In Complex With A Pyridopyrimidinone
Inhibitor
pdb|3KRJ|A Chain A, Cfms Tyrosine Kinase In Complex With
4-Cyano-1h-Imidazole-2-Carboxylic Acid
(2-Cyclohex-1-Enyl-4-Piperidin-4-Yl-Phenyl)-Amide
pdb|3KRL|A Chain A, Cfms Tyrosine Kinase In Complex With
5-Cyano-Furan-2-Carboxylic Acid
[4-(4-Methyl-Piperazin-1-Yl)-2-Piperidin-1-Yl-Phenyl]-
Amide
Length = 335
Score = 42.7 bits (99), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 27/98 (27%), Positives = 47/98 (47%), Gaps = 3/98 (3%)
Query: 68 LKIASDIVNSLAYLHFGFPRPIVLRNFKTQNILFNEENVAKWFDFLLSISIPEGETHITT 127
L +S + +A+L + + R+ +N+L +VAK DF L+ I +I
Sbjct: 169 LHFSSQVAQGMAFLA---SKNCIHRDVAARNVLLTNGHVAKIGDFGLARDIMNDSNYIVK 225
Query: 128 DRVIGTRGYSAPEYISICVLNEKSNVFSFGAFLFELLA 165
+ APE I CV +S+V+S+G L+E+ +
Sbjct: 226 GNARLPVKWMAPESIFDCVYTVQSDVWSYGILLWEIFS 263
>pdb|3U6J|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Pyrazolone Inhibitor
Length = 314
Score = 42.7 bits (99), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 26/85 (30%), Positives = 43/85 (50%)
Query: 81 LHFGFPRPIVLRNFKTQNILFNEENVAKWFDFLLSISIPEGETHITTDRVIGTRGYSAPE 140
+ F R + R+ +NIL +E+NV K DF L+ I + ++ + APE
Sbjct: 152 MEFLASRKCIHRDLAARNILLSEKNVVKICDFGLARDIYKDPDYVRKGDARLPLKWMAPE 211
Query: 141 YISICVLNEKSNVFSFGAFLFELLA 165
I V +S+V+SFG L+E+ +
Sbjct: 212 TIFDRVYTIQSDVWSFGVLLWEIFS 236
>pdb|3E5A|A Chain A, Crystal Structure Of Aurora A In Complex With Vx-680 And
Tpx2
Length = 268
Score = 42.7 bits (99), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 26/96 (27%), Positives = 46/96 (47%), Gaps = 7/96 (7%)
Query: 72 SDIVNSLAYLHFGFPRPIVLRNFKTQNILFNEENVAKWFDFLLSISIPEGETHITTDRVI 131
+++ N+L+Y H + ++ R+ K +N+L K DF S+ P +
Sbjct: 115 TELANALSYCH---SKRVIHRDIKPENLLLGSAGELKIADFGWSVHAPSSRR----TXLC 167
Query: 132 GTRGYSAPEYISICVLNEKSNVFSFGAFLFELLAGR 167
GT Y PE I + +EK +++S G +E L G+
Sbjct: 168 GTLDYLPPEMIEGRMHDEKVDLWSLGVLCYEFLVGK 203
>pdb|3ALN|A Chain A, Crystal Structure Of Human Non-Phosphorylated Mkk4 Kinase
Domain Complexed With Amp-Pnp
pdb|3ALN|B Chain B, Crystal Structure Of Human Non-Phosphorylated Mkk4 Kinase
Domain Complexed With Amp-Pnp
pdb|3ALN|C Chain C, Crystal Structure Of Human Non-Phosphorylated Mkk4 Kinase
Domain Complexed With Amp-Pnp
pdb|3ALO|A Chain A, Crystal Structure Of Human Non-Phosphorylated Mkk4 Kinase
Domain Ternary Complex With Amp-Pnp And P38 Peptide
pdb|3VUT|A Chain A, Crystal Structures Of Non-Phosphorylated Map2k4
pdb|3VUT|B Chain B, Crystal Structures Of Non-Phosphorylated Map2k4
Length = 327
Score = 42.7 bits (99), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 37/119 (31%), Positives = 54/119 (45%), Gaps = 11/119 (9%)
Query: 53 YGTLRDCIFGAPLPRLKIASDIVNSLAYLHFGFPRPIVLRNFKTQNILFNEENVAKWFDF 112
Y L D I L ++ +A+ V +L +L I+ R+ K NIL + K DF
Sbjct: 115 YSVLDDVIPEEILGKITLAT--VKALNHLKENLK--IIHRDIKPSNILLDRSGNIKLCDF 170
Query: 113 LLSISIPEGETHITTDRVIGTRGYSAPEYISICVLNE----KSNVFSFGAFLFELLAGR 167
+S + + I R G R Y APE I + +S+V+S G L+EL GR
Sbjct: 171 GISGQLVDS---IAKTRDAGCRPYMAPERIDPSASRQGYDVRSDVWSLGITLYELATGR 226
>pdb|3EWH|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Pyridyl-Pyrimidine Benzimidazole Inhibitor
Length = 314
Score = 42.7 bits (99), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 26/85 (30%), Positives = 43/85 (50%)
Query: 81 LHFGFPRPIVLRNFKTQNILFNEENVAKWFDFLLSISIPEGETHITTDRVIGTRGYSAPE 140
+ F R + R+ +NIL +E+NV K DF L+ I + ++ + APE
Sbjct: 152 MEFLASRKCIHRDLAARNILLSEKNVVKICDFGLARDIYKDPDYVRKGDARLPLKWMAPE 211
Query: 141 YISICVLNEKSNVFSFGAFLFELLA 165
I V +S+V+SFG L+E+ +
Sbjct: 212 TIFDRVYTIQSDVWSFGVLLWEIFS 236
>pdb|3CJG|A Chain A, Crystal Structure Of Vegfr2 In Complex With A
3,4,5-Trimethoxy Aniline Containing Pyrimidine
Length = 309
Score = 42.7 bits (99), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 26/85 (30%), Positives = 43/85 (50%)
Query: 81 LHFGFPRPIVLRNFKTQNILFNEENVAKWFDFLLSISIPEGETHITTDRVIGTRGYSAPE 140
+ F R + R+ +NIL +E+NV K DF L+ I + ++ + APE
Sbjct: 157 MEFLASRKXIHRDLAARNILLSEKNVVKICDFGLARDIYKDPDYVRKGDARLPLKWMAPE 216
Query: 141 YISICVLNEKSNVFSFGAFLFELLA 165
I V +S+V+SFG L+E+ +
Sbjct: 217 TIFDRVYTIQSDVWSFGVLLWEIFS 241
>pdb|1YWN|A Chain A, Vegfr2 In Complex With A Novel
4-amino-furo[2,3-d]pyrimidine
Length = 316
Score = 42.7 bits (99), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 26/85 (30%), Positives = 42/85 (49%)
Query: 81 LHFGFPRPIVLRNFKTQNILFNEENVAKWFDFLLSISIPEGETHITTDRVIGTRGYSAPE 140
+ F R + R+ +NIL +E+NV K DF L+ I + + + APE
Sbjct: 161 MEFLASRKCIHRDLAARNILLSEKNVVKICDFGLARDIXKDPDXVRKGDARLPLKWMAPE 220
Query: 141 YISICVLNEKSNVFSFGAFLFELLA 165
I V +S+V+SFG L+E+ +
Sbjct: 221 TIFDRVYTIQSDVWSFGVLLWEIFS 245
>pdb|3VHK|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Back Pocket Binder
Length = 368
Score = 42.7 bits (99), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 26/85 (30%), Positives = 43/85 (50%)
Query: 81 LHFGFPRPIVLRNFKTQNILFNEENVAKWFDFLLSISIPEGETHITTDRVIGTRGYSAPE 140
+ F R + R+ +NIL +E+NV K DF L+ I + ++ + APE
Sbjct: 213 MEFLASRKCIHRDLAARNILLSEKNVVKICDFGLARDIYKDPDYVRKGDARLPLKWMAPE 272
Query: 141 YISICVLNEKSNVFSFGAFLFELLA 165
I V +S+V+SFG L+E+ +
Sbjct: 273 TIFDRVYTIQSDVWSFGVLLWEIFS 297
>pdb|3HNG|A Chain A, Crystal Structure Of Vegfr1 In Complex With
N-(4-chlorophenyl)-2-
((pyridin-4-ylmethyl)amino)benzamide
Length = 360
Score = 42.7 bits (99), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 25/85 (29%), Positives = 43/85 (50%)
Query: 81 LHFGFPRPIVLRNFKTQNILFNEENVAKWFDFLLSISIPEGETHITTDRVIGTRGYSAPE 140
+ F R + R+ +NIL +E NV K DF L+ I + ++ + APE
Sbjct: 212 MEFLSSRKCIHRDLAARNILLSENNVVKICDFGLARDIYKNPDYVRKGDTRLPLKWMAPE 271
Query: 141 YISICVLNEKSNVFSFGAFLFELLA 165
I + + KS+V+S+G L+E+ +
Sbjct: 272 SIFDKIYSTKSDVWSYGVLLWEIFS 296
>pdb|3LCO|A Chain A, Inhibitor Bound To A Dfg-Out Structure Of The Kinase
Domain Of Csf-1r
Length = 324
Score = 42.7 bits (99), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 27/98 (27%), Positives = 47/98 (47%), Gaps = 3/98 (3%)
Query: 68 LKIASDIVNSLAYLHFGFPRPIVLRNFKTQNILFNEENVAKWFDFLLSISIPEGETHITT 127
L +S + +A+L + + R+ +N+L +VAK DF L+ I +I
Sbjct: 161 LHFSSQVAQGMAFLA---SKNCIHRDVAARNVLLTNGHVAKIGDFGLARDIMNDSNYIVK 217
Query: 128 DRVIGTRGYSAPEYISICVLNEKSNVFSFGAFLFELLA 165
+ APE I CV +S+V+S+G L+E+ +
Sbjct: 218 GNARLPVKWMAPESIFDCVYTVQSDVWSYGILLWEIFS 255
>pdb|3H0Y|A Chain A, Aurora A In Complex With A Bisanilinopyrimidine
pdb|3H0Z|A Chain A, Aurora A In Complex With A Bisanilinopyrimidine
pdb|3H0Z|B Chain B, Aurora A In Complex With A Bisanilinopyrimidine
pdb|3H0Z|C Chain C, Aurora A In Complex With A Bisanilinopyrimidine
pdb|3H10|A Chain A, Aurora A Inhibitor Complex
pdb|3H10|B Chain B, Aurora A Inhibitor Complex
pdb|3H10|D Chain D, Aurora A Inhibitor Complex
pdb|3P9J|A Chain A, Aurora A Kinase Domain With Phthalazinone Pyrazole
Inhibitor
Length = 268
Score = 42.7 bits (99), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 26/96 (27%), Positives = 46/96 (47%), Gaps = 7/96 (7%)
Query: 72 SDIVNSLAYLHFGFPRPIVLRNFKTQNILFNEENVAKWFDFLLSISIPEGETHITTDRVI 131
+++ N+L+Y H + ++ R+ K +N+L K DF S+ P +
Sbjct: 115 TELANALSYCH---SKRVIHRDIKPENLLLGSAGELKIADFGWSVHAPSSRRAA----LC 167
Query: 132 GTRGYSAPEYISICVLNEKSNVFSFGAFLFELLAGR 167
GT Y PE I + +EK +++S G +E L G+
Sbjct: 168 GTLDYLPPEMIEGRMHDEKVDLWSLGVLCYEFLVGK 203
>pdb|2DWB|A Chain A, Aurora-A Kinase Complexed With Amppnp
Length = 285
Score = 42.7 bits (99), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 28/96 (29%), Positives = 48/96 (50%), Gaps = 7/96 (7%)
Query: 72 SDIVNSLAYLHFGFPRPIVLRNFKTQNILFNEENVAKWFDFLLSISIPEGETHITTDRVI 131
+++ N+L+Y H + ++ R+ K +N+L K DF S+ P + TT +
Sbjct: 120 TELANALSYCH---SKRVIHRDIKPENLLLGSAGELKIADFGWSVHAPS--SRRTT--LC 172
Query: 132 GTRGYSAPEYISICVLNEKSNVFSFGAFLFELLAGR 167
GT Y PE I +EK +++S G +E L G+
Sbjct: 173 GTLDYLPPEXIEGRXHDEKVDLWSLGVLCYEFLVGK 208
>pdb|3VID|A Chain A, Crystal Structure Of Human Vegfr2 Kinase Domain With
Compound A
Length = 356
Score = 42.7 bits (99), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 26/85 (30%), Positives = 43/85 (50%)
Query: 81 LHFGFPRPIVLRNFKTQNILFNEENVAKWFDFLLSISIPEGETHITTDRVIGTRGYSAPE 140
+ F R + R+ +NIL +E+NV K DF L+ I + ++ + APE
Sbjct: 204 MEFLASRKCIHRDLAARNILLSEKNVVKICDFGLARDIYKDPDYVRKGDARLPLKWMAPE 263
Query: 141 YISICVLNEKSNVFSFGAFLFELLA 165
I V +S+V+SFG L+E+ +
Sbjct: 264 TIFDRVYTIQSDVWSFGVLLWEIFS 288
>pdb|2OH4|A Chain A, Crystal Structure Of Vegfr2 With A Benzimidazole-Urea
Inhibitor
Length = 316
Score = 42.7 bits (99), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 26/85 (30%), Positives = 42/85 (49%)
Query: 81 LHFGFPRPIVLRNFKTQNILFNEENVAKWFDFLLSISIPEGETHITTDRVIGTRGYSAPE 140
+ F R + R+ +NIL +E+NV K DF L+ I + + + APE
Sbjct: 161 MEFLASRKCIHRDLAARNILLSEKNVVKICDFGLARDIXKDPDXVRKGDARLPLKWMAPE 220
Query: 141 YISICVLNEKSNVFSFGAFLFELLA 165
I V +S+V+SFG L+E+ +
Sbjct: 221 TIFDRVYTIQSDVWSFGVLLWEIFS 245
>pdb|4AGC|A Chain A, Crystal Structure Of Vegfr2 (Juxtamembrane And Kinase
Domains) In Complex With Axitinib (Ag-013736)
(N-Methyl-2-(
3-((E)-2-Pyridin-2-Yl-Vinyl)-1h-Indazol-6-Ylsulfanyl)-
Benzamide)
pdb|4AGD|A Chain A, Crystal Structure Of Vegfr2 (Juxtamembrane And Kinase
Domains) In Complex With Sunitinib (Su11248) (N-2-
Diethylaminoethyl)-5-((Z)-(5-Fluoro-2-Oxo-1h-Indol-3-
Ylidene)methyl)-2,4-Dimethyl-1h-Pyrrole-3-Carboxamide)
pdb|4ASD|A Chain A, Crystal Structure Of Vegfr2 (Juxtamembrane And Kinase
Domains) In Complex With Sorafenib (Bay 43-9006)
pdb|4ASE|A Chain A, Crystal Structure Of Vegfr2 (Juxtamembrane And Kinase
Domains) In Complex With Tivozanib (Av-951)
Length = 353
Score = 42.7 bits (99), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 26/85 (30%), Positives = 43/85 (50%)
Query: 81 LHFGFPRPIVLRNFKTQNILFNEENVAKWFDFLLSISIPEGETHITTDRVIGTRGYSAPE 140
+ F R + R+ +NIL +E+NV K DF L+ I + ++ + APE
Sbjct: 198 MEFLASRKCIHRDLAARNILLSEKNVVKICDFGLARDIYKDPDYVRKGDARLPLKWMAPE 257
Query: 141 YISICVLNEKSNVFSFGAFLFELLA 165
I V +S+V+SFG L+E+ +
Sbjct: 258 TIFDRVYTIQSDVWSFGVLLWEIFS 282
>pdb|3D14|A Chain A, Crystal Structure Of Mouse Aurora A (Asn186->gly,
Lys240->arg, Met302- >leu) In Complex With
1-{5-[2-(Thieno[3,2-D]pyrimidin-4-Ylamino)- Ethyl]-
Thiazol-2-Yl}-3-(3-Trifluoromethyl-Phenyl)-Urea
pdb|3DJ5|A Chain A, Crystal Structure Of The Mouse Aurora-A Catalytic Domain
(Asn186->gly, Lys240->arg, Met302->leu) In Complex With
Compound 290.
pdb|3DJ6|A Chain A, Crystal Structure Of The Mouse Aurora-A Catalytic Domain
(Asn186->gly, Lys240->arg, Met302->leu) In Complex With
Compound 823.
pdb|3DJ7|A Chain A, Crystal Structure Of The Mouse Aurora-A Catalytic Domain
(Asn186->gly, Lys240->arg, Met302->leu) In Complex With
Compound 130.
pdb|3D15|A Chain A, Crystal Structure Of Mouse Aurora A (Asn186->gly, Lys240-
>arg, Met302->leu) In Complex With
1-(3-Chloro-Phenyl)-3-
{5-[2-(Thieno[3,2-D]pyrimidin-4-Ylamino)-
Ethyl]-Thiazol-2- Yl}-Urea [sns-314]
pdb|3D2I|A Chain A, Crystal Structure Of Mouse Aurora A (Asn186->gly, Lys240-
>arg, Met302->leu) In Complex With 1-{5-[2-(1-Methyl-1h-
Pyrazolo[4,
3-D]pyrimidin-7-Ylamino)-Ethyl]-Thiazol-2-Yl}-3-
(3-Trifluoromethyl-Phenyl)-Urea
pdb|3D2K|A Chain A, Crystal Structure Of Mouse Aurora A (Asn186->gly, Lys240-
>arg, Met302->leu) In Complex With
[7-(2-{2-[3-(3-Chloro-
Phenyl)-Ureido]-Thiazol-5-Yl}-Ethylamino)-Pyrazolo[4,3-
D]pyrimidin-1-Yl]-Acetic Acid
Length = 272
Score = 42.7 bits (99), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 28/95 (29%), Positives = 47/95 (49%), Gaps = 7/95 (7%)
Query: 72 SDIVNSLAYLHFGFPRPIVLRNFKTQNILFNEENVAKWFDFLLSISIPEGETHITTDRVI 131
+++ N+L+Y H + ++ R+ K +N+L K DF S+ P TT +
Sbjct: 119 TELANALSYCH---SKRVIHRDIKPENLLLGSNGELKIADFGWSVHAPSSRR--TT--LC 171
Query: 132 GTRGYSAPEYISICVLNEKSNVFSFGAFLFELLAG 166
GT Y PE I + +EK +++S G +E L G
Sbjct: 172 GTLDYLPPEMIEGRMHDEKVDLWSLGVLCYEFLVG 206
>pdb|3VHE|A Chain A, Crystal Structure Of Human Vegfr2 Kinase Domain With A
Novel Pyrrolopyrimidine Inhibitor
Length = 359
Score = 42.7 bits (99), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 26/85 (30%), Positives = 43/85 (50%)
Query: 81 LHFGFPRPIVLRNFKTQNILFNEENVAKWFDFLLSISIPEGETHITTDRVIGTRGYSAPE 140
+ F R + R+ +NIL +E+NV K DF L+ I + ++ + APE
Sbjct: 206 MEFLASRKCIHRDLAARNILLSEKNVVKICDFGLARDIYKDPDYVRKGDARLPLKWMAPE 265
Query: 141 YISICVLNEKSNVFSFGAFLFELLA 165
I V +S+V+SFG L+E+ +
Sbjct: 266 TIFDRVYTIQSDVWSFGVLLWEIFS 290
>pdb|2WQM|A Chain A, Structure Of Apo Human Nek7
pdb|2WQN|A Chain A, Structure Of Adp-Bound Human Nek7
Length = 310
Score = 42.4 bits (98), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 50/232 (21%), Positives = 84/232 (36%), Gaps = 27/232 (11%)
Query: 14 GSCINNITYAAQMSHNHILKRIGCCLQTPIPILVFQSVEYGTLRDCI--FGAP---LPRL 68
CI I Q++H +++K ++ +V + + G L I F +P
Sbjct: 77 ADCIKEIDLLKQLNHPNVIKYYASFIEDNELNIVLELADAGDLSRMIKHFKKQKRLIPER 136
Query: 69 KIASDIVNSLAYLHFGFPRPIVLRNFKTQNILFNEENVAKWFDFLLSISIPEGETHITTD 128
+ V + L R ++ R+ K N+ V K D L T
Sbjct: 137 TVWKYFVQLCSALEHMHSRRVMHRDIKPANVFITATGVVKLGDLGLGRFFSSKTT--AAH 194
Query: 129 RVIGTRGYSAPEYISICVLNEKSNVFSFGAFLFELLAGRIHIWDLLKDTHDHGCFFNEYL 188
++GT Y +PE I N KS+++S G L+E+ A + F+ + +
Sbjct: 195 SLVGTPYYMSPERIHENGYNFKSDIWSLGCLLYEMAALQ-------------SPFYGDKM 241
Query: 189 KNYLEDKRFTGIPAPIIVQDIPCIEKEQQLHASAQLTLECVNNSPEDRPTMV 240
Y K+ D P + + QL C+N PE RP +
Sbjct: 242 NLYSLCKKIEQC-------DYPPLPSDHYSEELRQLVNMCINPDPEKRPDVT 286
>pdb|1ZY4|A Chain A, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: R794g
Hyperactivating Mutant In Apo Form.
pdb|1ZY4|B Chain B, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: R794g
Hyperactivating Mutant In Apo Form.
pdb|1ZY5|A Chain A, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: R794g
Hyperactivating Mutant Complexed With Amppnp.
pdb|1ZY5|B Chain B, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: R794g
Hyperactivating Mutant Complexed With Amppnp
Length = 303
Score = 42.4 bits (98), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 41/163 (25%), Positives = 70/163 (42%), Gaps = 25/163 (15%)
Query: 22 YAAQMSHNHILKRIGCCLQTPIPILVFQSVEYGTLRDCIFGAPLPR-----LKIASDIVN 76
YAA + + +K + + + + E GTL D I L + ++ I+
Sbjct: 68 YAAWLERRNFVKPMTAVKKKSTLFIQMEYCENGTLYDLIHSENLNQQRDEYWRLFRQILE 127
Query: 77 SLAYLHFGFPRPIVLRNFKTQNILFNEENVAKWFDFLL--------------SISIPEGE 122
+L+Y+H + I+ R+ K NI +E K DF L S ++P
Sbjct: 128 ALSYIH---SQGIIHRDLKPMNIFIDESRNVKIGDFGLAKNVHRSLDILKLDSQNLPGSS 184
Query: 123 THITTDRVIGTRGYSAPEYI-SICVLNEKSNVFSFGAFLFELL 164
++T+ IGT Y A E + NEK +++S G FE++
Sbjct: 185 DNLTS--AIGTAMYVATEVLDGTGHYNEKIDMYSLGIIFFEMI 225
>pdb|3C7Q|A Chain A, Structure Of Vegfr2 Kinase Domain In Complex With Bibf1120
Length = 316
Score = 42.4 bits (98), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 26/85 (30%), Positives = 42/85 (49%)
Query: 81 LHFGFPRPIVLRNFKTQNILFNEENVAKWFDFLLSISIPEGETHITTDRVIGTRGYSAPE 140
+ F R + R+ +NIL +E+NV K DF L+ I + + + APE
Sbjct: 161 MEFLASRKXIHRDLAARNILLSEKNVVKICDFGLARDIXKDPDXVRKGDARLPLKWMAPE 220
Query: 141 YISICVLNEKSNVFSFGAFLFELLA 165
I V +S+V+SFG L+E+ +
Sbjct: 221 TIFDRVYTIQSDVWSFGVLLWEIFS 245
>pdb|1U59|A Chain A, Crystal Structure Of The Zap-70 Kinase Domain In Complex
With Staurosporine
Length = 287
Score = 42.4 bits (98), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 36/145 (24%), Positives = 69/145 (47%), Gaps = 6/145 (4%)
Query: 25 QMSHNHILKRIGCCLQTPIPILVFQSVEYGTLRDCIFGA--PLPRLKIASDIVNSLAYLH 82
Q+ + +I++ IG C Q +LV + G L + G +P +A + +
Sbjct: 66 QLDNPYIVRLIGVC-QAEALMLVMEMAGGGPLHKFLVGKREEIPVSNVAELLHQVSMGMK 124
Query: 83 FGFPRPIVLRNFKTQNILFNEENVAKWFDFLLSISIPEGETHITTDRVIGTR--GYSAPE 140
+ + V R+ +N+L + AK DF LS ++ +++ T R G + APE
Sbjct: 125 YLEEKNFVHRDLAARNVLLVNRHYAKISDFGLSKALGADDSYYTA-RSAGKWPLKWYAPE 183
Query: 141 YISICVLNEKSNVFSFGAFLFELLA 165
I+ + +S+V+S+G ++E L+
Sbjct: 184 CINFRKFSSRSDVWSYGVTMWEALS 208
>pdb|2P2I|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Nicotinamide Inhibitor
pdb|2P2I|B Chain B, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Nicotinamide Inhibitor
pdb|3EFL|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With Motesanib
pdb|3EFL|B Chain B, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With Motesanib
Length = 314
Score = 42.4 bits (98), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 26/85 (30%), Positives = 42/85 (49%)
Query: 81 LHFGFPRPIVLRNFKTQNILFNEENVAKWFDFLLSISIPEGETHITTDRVIGTRGYSAPE 140
+ F R + R+ +NIL +E+NV K DF L+ I + + + APE
Sbjct: 152 MEFLASRKCIHRDLAARNILLSEKNVVKICDFGLARDIXKDPDXVRKGDARLPLKWMAPE 211
Query: 141 YISICVLNEKSNVFSFGAFLFELLA 165
I V +S+V+SFG L+E+ +
Sbjct: 212 TIFDRVYTIQSDVWSFGVLLWEIFS 236
>pdb|2P2H|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Pyridinyl-Triazine Inhibitor
pdb|2QU5|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Benzimidazole Inhibitor
pdb|2QU6|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Benzoxazole Inhibitor
pdb|2QU6|B Chain B, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Benzoxazole Inhibitor
pdb|3B8Q|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Naphthamide Inhibitor
pdb|3B8Q|B Chain B, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Naphthamide Inhibitor
pdb|3B8R|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Naphthamide Inhibitor
pdb|3B8R|B Chain B, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Naphthamide Inhibitor
pdb|2RL5|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A 2,3-Dihydro-1,4-Benzoxazine Inhibitor
pdb|3BE2|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Benzamide Inhibitor
pdb|3CP9|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Pyridone Inhibitor
pdb|3CP9|B Chain B, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Pyridone Inhibitor
pdb|3CPB|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Bisamide Inhibitor
pdb|3CPB|B Chain B, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Bisamide Inhibitor
pdb|3CPC|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Pyridone Inhibitor
pdb|3CPC|B Chain B, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Pyridone Inhibitor
pdb|3DTW|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Benzisoxazole Inhibitor
pdb|3DTW|B Chain B, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Benzisoxazole Inhibitor
Length = 314
Score = 42.4 bits (98), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 26/85 (30%), Positives = 42/85 (49%)
Query: 81 LHFGFPRPIVLRNFKTQNILFNEENVAKWFDFLLSISIPEGETHITTDRVIGTRGYSAPE 140
+ F R + R+ +NIL +E+NV K DF L+ I + + + APE
Sbjct: 152 MEFLASRKCIHRDLAARNILLSEKNVVKICDFGLARDIXKDPDXVRKGDARLPLKWMAPE 211
Query: 141 YISICVLNEKSNVFSFGAFLFELLA 165
I V +S+V+SFG L+E+ +
Sbjct: 212 TIFDRVYTIQSDVWSFGVLLWEIFS 236
>pdb|3OMV|A Chain A, Crystal Structure Of C-Raf (Raf-1)
pdb|3OMV|B Chain B, Crystal Structure Of C-Raf (Raf-1)
Length = 307
Score = 42.4 bits (98), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 29/104 (27%), Positives = 49/104 (47%), Gaps = 6/104 (5%)
Query: 68 LKIASDIVNSLAYLHFGFPRPIVLRNFKTQNILFNEENVAKWFDFLLSISIPEGETHITT 127
+ IA + YLH + I+ R+ K+ NI +E K DF L+
Sbjct: 135 IDIARQTAQGMDYLH---AKNIIHRDMKSNNIFLHEGLTVKIGDFGLATVKSRWSGSQQV 191
Query: 128 DRVIGTRGYSAPEYISICVLNE---KSNVFSFGAFLFELLAGRI 168
++ G+ + APE I + N +S+V+S+G L+EL+ G +
Sbjct: 192 EQPTGSVLWMAPEVIRMQDNNPFSFQSDVYSYGIVLYELMTGEL 235
>pdb|1AD5|A Chain A, Src Family Kinase Hck-Amp-Pnp Complex
pdb|1AD5|B Chain B, Src Family Kinase Hck-Amp-Pnp Complex
pdb|2HCK|A Chain A, Src Family Kinase Hck-Quercetin Complex
pdb|2HCK|B Chain B, Src Family Kinase Hck-Quercetin Complex
Length = 438
Score = 42.4 bits (98), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 55/223 (24%), Positives = 96/223 (43%), Gaps = 51/223 (22%)
Query: 26 MSHNHILKRIGCCLQTPIPILVFQSVEYGTLRDCIFG-----APLPRL-KIASDIVNSLA 79
+ H+ ++K + PI I+ + + G+L D + PLP+L ++ I +A
Sbjct: 234 LQHDKLVKLHAVVTKEPIYIIT-EFMAKGSLLDFLKSDEGSKQPLPKLIDFSAQIAEGMA 292
Query: 80 YLHFGFPRPIVLRNFKTQNILFNEENVAKWFDFLLSISIPEGETHITTDRVIGTR---GY 136
++ R + R+ + NIL + V K DF L+ +G + +
Sbjct: 293 FIE---QRNYIHRDLRAANILVSASLVCKIADFGLA--------------RVGAKFPIKW 335
Query: 137 SAPEYISICVLNEKSNVFSFGAFLFELLA-GRIHIWDLLKDTHDHGCFFNEYLKNYLEDK 195
+APE I+ KS+V+SFG L E++ GRI + N + LE
Sbjct: 336 TAPEAINFGSFTIKSDVWSFGILLMEIVTYGRI----------PYPGMSNPEVIRALE-- 383
Query: 196 RFTGIPAPIIVQDIPCIEKEQQLHASAQLTLECVNNSPEDRPT 238
R +P P ++ P ++L+ + + C N PE+RPT
Sbjct: 384 RGYRMPRP---ENCP-----EELY---NIMMRCWKNRPEERPT 415
>pdb|3KL8|A Chain A, Camkiintide Inhibitor Complex
pdb|3KL8|C Chain C, Camkiintide Inhibitor Complex
pdb|3KL8|E Chain E, Camkiintide Inhibitor Complex
pdb|3KL8|G Chain G, Camkiintide Inhibitor Complex
pdb|3KL8|I Chain I, Camkiintide Inhibitor Complex
Length = 269
Score = 42.4 bits (98), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 44/161 (27%), Positives = 69/161 (42%), Gaps = 15/161 (9%)
Query: 25 QMSHNHILKRIGCCLQTPIPILVFQSVEYGTLRDCIFGAPLPRLKIAS----DIVNSLAY 80
++ H +I++ + LVF V G L + I AS I+ S+AY
Sbjct: 61 KLQHPNIVRLHDSIQEESFHYLVFDLVTGGELFEDIVAREFYSEADASHCIQQILESIAY 120
Query: 81 LHFGFPRPIVLRNFKTQNILFNEEN---VAKWFDFLLSISIPEGETHITTDRVIGTRGYS 137
H IV RN K +N+L + K DF L+I + + E GT GY
Sbjct: 121 CH---SNGIVHRNLKPENLLLASKAKGAAVKLADFGLAIEVNDSEA---WHGFAGTPGYL 174
Query: 138 APEYISICVLNEKSNVFSFGAFLFELLAGRIHIWDLLKDTH 178
+PE + ++ ++++ G L+ LL G WD +D H
Sbjct: 175 SPEVLKKDPYSKPVDIWACGVILYILLVGYPPFWD--EDQH 213
>pdb|3KK9|A Chain A, Camkii Substrate Complex B
Length = 282
Score = 42.4 bits (98), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 44/161 (27%), Positives = 69/161 (42%), Gaps = 15/161 (9%)
Query: 25 QMSHNHILKRIGCCLQTPIPILVFQSVEYGTLRDCIFGAPLPRLKIAS----DIVNSLAY 80
++ H +I++ + LVF V G L + I AS I+ S+AY
Sbjct: 60 KLQHPNIVRLHDSIQEESFHYLVFDLVTGGELFEDIVAREFYSEADASHCIQQILESIAY 119
Query: 81 LHFGFPRPIVLRNFKTQNILFNEEN---VAKWFDFLLSISIPEGETHITTDRVIGTRGYS 137
H IV RN K +N+L + K DF L+I + + E GT GY
Sbjct: 120 CH---SNGIVHRNLKPENLLLASKAKGAAVKLADFGLAIEVNDSEA---WHGFAGTPGYL 173
Query: 138 APEYISICVLNEKSNVFSFGAFLFELLAGRIHIWDLLKDTH 178
+PE + ++ ++++ G L+ LL G WD +D H
Sbjct: 174 SPEVLKKDPYSKPVDIWACGVILYILLVGYPPFWD--EDQH 212
>pdb|3KK8|A Chain A, Camkii Substrate Complex A
Length = 284
Score = 42.4 bits (98), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 44/161 (27%), Positives = 69/161 (42%), Gaps = 15/161 (9%)
Query: 25 QMSHNHILKRIGCCLQTPIPILVFQSVEYGTLRDCIFGAPLPRLKIAS----DIVNSLAY 80
++ H +I++ + LVF V G L + I AS I+ S+AY
Sbjct: 61 KLQHPNIVRLHDSIQEESFHYLVFDLVTGGELFEDIVAREFYSEADASHCIQQILESIAY 120
Query: 81 LHFGFPRPIVLRNFKTQNILFNEEN---VAKWFDFLLSISIPEGETHITTDRVIGTRGYS 137
H IV RN K +N+L + K DF L+I + + E GT GY
Sbjct: 121 CH---SNGIVHRNLKPENLLLASKAKGAAVKLADFGLAIEVNDSEA---WHGFAGTPGYL 174
Query: 138 APEYISICVLNEKSNVFSFGAFLFELLAGRIHIWDLLKDTH 178
+PE + ++ ++++ G L+ LL G WD +D H
Sbjct: 175 SPEVLKKDPYSKPVDIWACGVILYILLVGYPPFWD--EDQH 213
>pdb|4HZR|A Chain A, Crystal Structure Of Ack1 Kinase Domain
pdb|4HZR|B Chain B, Crystal Structure Of Ack1 Kinase Domain
Length = 277
Score = 42.4 bits (98), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 49/232 (21%), Positives = 92/232 (39%), Gaps = 35/232 (15%)
Query: 17 INNITYAAQMSHNHILKRIGCCLQTPIPILVFQSVEYGTLRDCI-------FGAPLPRLK 69
I + + H ++++ G L P+ +V + G+L D + L R
Sbjct: 63 IREVNAMHSLDHRNLIRLYGVVLTPPMK-MVTELAPLGSLLDRLRKHQGHFLLGTLSR-- 119
Query: 70 IASDIVNSLAYLHFGFPRPIVLRNFKTQNILFNEENVAKWFDFLLSISIPEGETH-ITTD 128
A + + YL + + R+ +N+L ++ K DF L ++P+ + H + +
Sbjct: 120 YAVQVAEGMGYLE---SKRFIHRDLAARNLLLATRDLVKIGDFGLMRALPQNDDHYVMQE 176
Query: 129 RVIGTRGYSAPEYISICVLNEKSNVFSFGAFLFELLAGRIHIWDLLKDTHDHGCFFNEYL 188
+ APE + + S+ + FG L+E+ W G ++ L
Sbjct: 177 HRKVPFAWCAPESLKTRTFSHASDTWMFGVTLWEMFTYGQEPW--------IGLNGSQIL 228
Query: 189 KNYLEDKRFTGIPAPIIVQDIPCIEKEQQLHASAQLTLECVNNSPEDRPTMV 240
DK +P P +D P Q ++ + ++C + PEDRPT V
Sbjct: 229 HKI--DKEGERLPRP---EDCP-----QDIY---NVMVQCWAHKPEDRPTFV 267
>pdb|4ID7|A Chain A, Ack1 Kinase In Complex With The Inhibitor
Cis-3-[8-amino-1-(4-
Phenoxyphenyl)imidazo[1,5-a]pyrazin-3-yl]cyclobutanol
Length = 273
Score = 42.0 bits (97), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 49/232 (21%), Positives = 92/232 (39%), Gaps = 35/232 (15%)
Query: 17 INNITYAAQMSHNHILKRIGCCLQTPIPILVFQSVEYGTLRDCI-------FGAPLPRLK 69
I + + H ++++ G L P+ +V + G+L D + L R
Sbjct: 59 IREVNAMHSLDHRNLIRLYGVVLTPPMK-MVTELAPLGSLLDRLRKHQGHFLLGTLSR-- 115
Query: 70 IASDIVNSLAYLHFGFPRPIVLRNFKTQNILFNEENVAKWFDFLLSISIPEGETH-ITTD 128
A + + YL + + R+ +N+L ++ K DF L ++P+ + H + +
Sbjct: 116 YAVQVAEGMGYLE---SKRFIHRDLAARNLLLATRDLVKIGDFGLMRALPQNDDHYVMQE 172
Query: 129 RVIGTRGYSAPEYISICVLNEKSNVFSFGAFLFELLAGRIHIWDLLKDTHDHGCFFNEYL 188
+ APE + + S+ + FG L+E+ W G ++ L
Sbjct: 173 HRKVPFAWCAPESLKTRTFSHASDTWMFGVTLWEMFTYGQEPW--------IGLNGSQIL 224
Query: 189 KNYLEDKRFTGIPAPIIVQDIPCIEKEQQLHASAQLTLECVNNSPEDRPTMV 240
DK +P P +D P Q ++ + ++C + PEDRPT V
Sbjct: 225 HKI--DKEGERLPRP---EDCP-----QDIY---NVMVQCWAHKPEDRPTFV 263
>pdb|3EQC|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek1) In A Ternary Complex With
Compound 1, Atp-Gs And Mg2p
pdb|3EQD|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek1) In A Binary Complex With Atp-Gs
And Mg2p
pdb|3EQF|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek1) In A Binary Complex With K252a
And Mg2p
pdb|3EQG|A Chain A, X-ray Structure Of The Human Mitogen-activated Protein
Kinase Kinase 1 (mek1) In A Ternary Complex With Pd, Adp
And Mg2p
pdb|3EQH|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek1) In A Ternary Complex With U0126,
Adp And Mg2p
pdb|3EQI|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek1) In A Binary Complex With Adp And
Mg2p
Length = 360
Score = 42.0 bits (97), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 29/102 (28%), Positives = 48/102 (47%), Gaps = 6/102 (5%)
Query: 69 KIASDIVNSLAYLHFGFPRPIVLRNFKTQNILFNEENVAKWFDFLLSISIPEGETHITTD 128
K++ ++ L YL I+ R+ K NIL N K DF +S + + +
Sbjct: 135 KVSIAVIKGLTYLRE--KHKIMHRDVKPSNILVNSRGEIKLCDFGVSGQLIDS----MAN 188
Query: 129 RVIGTRGYSAPEYISICVLNEKSNVFSFGAFLFELLAGRIHI 170
+GTR Y +PE + + +S+++S G L E+ GR I
Sbjct: 189 SFVGTRSYMSPERLQGTHYSVQSDIWSMGLSLVEMAVGRYPI 230
>pdb|1S9J|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek1) In A Complex With Ligand And
Mgatp
pdb|3DY7|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek1) In A Complex With Ligand And
Mgatp
pdb|3E8N|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek1) Complexed With A Potent Inhibitor
Rdea119 And Mgatp
pdb|3V01|A Chain A, Discovery Of Novel Allosteric Mek Inhibitors Possessing
Classical And Non-Classical Bidentate Ser212
Interactions.
pdb|3V04|A Chain A, Discovery Of Novel Allosteric Mek Inhibitors Possessing
Classical And Non-Classical Bidentate Ser212
Interactions
Length = 341
Score = 42.0 bits (97), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 29/102 (28%), Positives = 48/102 (47%), Gaps = 6/102 (5%)
Query: 69 KIASDIVNSLAYLHFGFPRPIVLRNFKTQNILFNEENVAKWFDFLLSISIPEGETHITTD 128
K++ ++ L YL I+ R+ K NIL N K DF +S + + +
Sbjct: 108 KVSIAVIKGLTYLRE--KHKIMHRDVKPSNILVNSRGEIKLCDFGVSGQLIDS----MAN 161
Query: 129 RVIGTRGYSAPEYISICVLNEKSNVFSFGAFLFELLAGRIHI 170
+GTR Y +PE + + +S+++S G L E+ GR I
Sbjct: 162 SFVGTRSYMSPERLQGTHYSVQSDIWSMGLSLVEMAVGRYPI 203
>pdb|2Y4I|C Chain C, Ksr2-Mek1 Heterodimer
Length = 395
Score = 42.0 bits (97), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 29/102 (28%), Positives = 48/102 (47%), Gaps = 6/102 (5%)
Query: 69 KIASDIVNSLAYLHFGFPRPIVLRNFKTQNILFNEENVAKWFDFLLSISIPEGETHITTD 128
K++ ++ L YL I+ R+ K NIL N K DF +S + + +
Sbjct: 170 KVSIAVIKGLTYLRE--KHKIMHRDVKPSNILVNSRGEIKLCDFGVSGQLIDS----MAN 223
Query: 129 RVIGTRGYSAPEYISICVLNEKSNVFSFGAFLFELLAGRIHI 170
+GTR Y +PE + + +S+++S G L E+ GR I
Sbjct: 224 SFVGTRSYMSPERLQGTHYSVQSDIWSMGLSLVEMAVGRYPI 265
>pdb|2P55|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek1) In A Complex With Ligand And
Mgatp
pdb|3EQB|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek1) In A Complex With Ligand And
Mgatp
Length = 333
Score = 42.0 bits (97), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 29/102 (28%), Positives = 48/102 (47%), Gaps = 6/102 (5%)
Query: 69 KIASDIVNSLAYLHFGFPRPIVLRNFKTQNILFNEENVAKWFDFLLSISIPEGETHITTD 128
K++ ++ L YL I+ R+ K NIL N K DF +S + + +
Sbjct: 108 KVSIAVIKGLTYLRE--KHKIMHRDVKPSNILVNSRGEIKLCDFGVSGQLIDS----MAN 161
Query: 129 RVIGTRGYSAPEYISICVLNEKSNVFSFGAFLFELLAGRIHI 170
+GTR Y +PE + + +S+++S G L E+ GR I
Sbjct: 162 SFVGTRSYMSPERLQGTHYSVQSDIWSMGLSLVEMAVGRYPI 203
>pdb|3ORN|A Chain A, Mitogen-Activated Protein Kinase Kinase 1 (Mek1) In
Complex With Ch4987655 And Mgamp-Pnp
pdb|3OS3|A Chain A, Mitogen-Activated Protein Kinase Kinase 1 (Mek1) In
Complex With Ch4858061 And Mgatp
Length = 307
Score = 42.0 bits (97), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 29/102 (28%), Positives = 48/102 (47%), Gaps = 6/102 (5%)
Query: 69 KIASDIVNSLAYLHFGFPRPIVLRNFKTQNILFNEENVAKWFDFLLSISIPEGETHITTD 128
K++ ++ L YL I+ R+ K NIL N K DF +S + + +
Sbjct: 108 KVSIAVIKGLTYLRE--KHKIMHRDVKPSNILVNSRGEIKLCDFGVSGQLIDS----MAN 161
Query: 129 RVIGTRGYSAPEYISICVLNEKSNVFSFGAFLFELLAGRIHI 170
+GTR Y +PE + + +S+++S G L E+ GR I
Sbjct: 162 SFVGTRSYMSPERLQGTHYSVQSDIWSMGLSLVEMAVGRYPI 203
>pdb|3SLS|A Chain A, Crystal Structure Of Human Mek-1 Kinase In Complex With
Ucb1353770 And Amppnp
pdb|3SLS|B Chain B, Crystal Structure Of Human Mek-1 Kinase In Complex With
Ucb1353770 And Amppnp
Length = 304
Score = 42.0 bits (97), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 28/99 (28%), Positives = 47/99 (47%), Gaps = 6/99 (6%)
Query: 69 KIASDIVNSLAYLHFGFPRPIVLRNFKTQNILFNEENVAKWFDFLLSISIPEGETHITTD 128
K++ ++ L YL I+ R+ K NIL N K DF +S + + +
Sbjct: 127 KVSIAVIKGLTYLRE--KHKIMHRDVKPSNILVNSRGEIKLCDFGVSGQLIDS----MAN 180
Query: 129 RVIGTRGYSAPEYISICVLNEKSNVFSFGAFLFELLAGR 167
+GTR Y +PE + + +S+++S G L E+ GR
Sbjct: 181 SFVGTRSYMSPERLQGTHYSVQSDIWSMGLSLVEMAVGR 219
>pdb|3I5N|A Chain A, Crystal Structure Of C-Met With Triazolopyridazine
Inhibitor 13
pdb|3U6H|A Chain A, Crystal Structure Of C-Met In Complex With Pyrazolone
Inhibitor 26
pdb|3U6I|A Chain A, Crystal Structure Of C-Met In Complex With Pyrazolone
Inhibitor 58a
pdb|4DEG|A Chain A, Crystal Structure Of C-Met In Complex With
Triazolopyridazine Inhibitor 2
pdb|4DEH|A Chain A, Crystal Structure Of C-Met In Complex With
Triazolopyridinone Inhibitor 3
pdb|4DEI|A Chain A, Crystal Structure Of C-Met In Complex With
Triazolopyridinone Inhibitor 24
Length = 309
Score = 42.0 bits (97), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 37/148 (25%), Positives = 70/148 (47%), Gaps = 13/148 (8%)
Query: 27 SHNHILKRIGCCLQTP-IPILVFQSVEYGTLRDCIFGAPL-PRLK----IASDIVNSLAY 80
SH ++L +G CL++ P++V +++G LR+ I P +K + + Y
Sbjct: 88 SHPNVLSLLGICLRSEGSPLVVLPYMKHGDLRNFIRNETHNPTVKDLIGFGLQVAKGMKY 147
Query: 81 LHFGFPRPIVLRNFKTQNILFNEENVAKWFDFLLSISIPEGETHITTDRVIGTR---GYS 137
L + V R+ +N + +E+ K DF L+ + + E + ++ G + +
Sbjct: 148 LA---SKKFVHRDLAARNCMLDEKFTVKVADFGLARDMYDKEYYSVHNKT-GAKLPVKWM 203
Query: 138 APEYISICVLNEKSNVFSFGAFLFELLA 165
A E + KS+V+SFG L+EL+
Sbjct: 204 ALESLQTQKFTTKSDVWSFGVLLWELMT 231
>pdb|2IVT|A Chain A, Crystal Structure Of Phosphorylated Ret Tyrosine Kinase
Domain
pdb|2IVU|A Chain A, Crystal Structure Of Phosphorylated Ret Tyrosine Kinase
Domain Complexed With The Inhibitor Zd6474
pdb|2X2K|A Chain A, Crystal Structure Of Phosphorylated Ret Tyrosine Kinase
Domain With Inhibitor
pdb|2X2L|A Chain A, Crystal Structure Of Phosphorylated Ret Tyrosine Kinase
Domain With Inhibitor
pdb|2X2M|A Chain A, Crystal Structure Of Phosphorylated Ret Tyrosine Kinase
Domain With Inhibitor
pdb|2X2M|B Chain B, Crystal Structure Of Phosphorylated Ret Tyrosine Kinase
Domain With Inhibitor
Length = 314
Score = 42.0 bits (97), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 38/166 (22%), Positives = 70/166 (42%), Gaps = 27/166 (16%)
Query: 25 QMSHNHILKRIGCCLQTPIPILVFQSVEYGTLRDCI---------------------FGA 63
Q++H H++K G C Q +L+ + +YG+LR +
Sbjct: 82 QVNHPHVIKLYGACSQDGPLLLIVEYAKYGSLRGFLRESRKVGPGYLGSGGSRNSSSLDH 141
Query: 64 PLPRLKIASDIVNSLAY-----LHFGFPRPIVLRNFKTQNILFNEENVAKWFDFLLSISI 118
P R D++ S A+ + + +V R+ +NIL E K DF LS +
Sbjct: 142 PDERALTMGDLI-SFAWQISQGMQYLAEMKLVHRDLAARNILVAEGRKMKISDFGLSRDV 200
Query: 119 PEGETHITTDRVIGTRGYSAPEYISICVLNEKSNVFSFGAFLFELL 164
E ++ + + + A E + + +S+V+SFG L+E++
Sbjct: 201 YEEDSXVKRSQGRIPVKWMAIESLFDHIYTTQSDVWSFGVLLWEIV 246
>pdb|1YHV|A Chain A, Crystal Structure Of Pak1 Kinase Domain With Two Point
Mutations (K299r, T423e)
pdb|2HY8|1 Chain 1, Pak1 Complex With St2001
Length = 297
Score = 42.0 bits (97), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 30/122 (24%), Positives = 53/122 (43%), Gaps = 4/122 (3%)
Query: 46 LVFQSVEYGTLRDCIFGAPLPRLKIASDIVNSLAYLHFGFPRPIVLRNFKTQNILFNEEN 105
+V + + G+L D + + +IA+ L L F ++ R+ K+ NIL +
Sbjct: 94 VVMEYLAGGSLTDVVTETCMDEGQIAAVCRECLQALEFLHSNQVIHRDIKSDNILLGMDG 153
Query: 106 VAKWFDFLLSISI-PEGETHITTDRVIGTRGYSAPEYISICVLNEKSNVFSFGAFLFELL 164
K DF I PE ++GT + APE ++ K +++S G E++
Sbjct: 154 SVKLTDFGFCAQITPEQSKR---SEMVGTPYWMAPEVVTRKAYGPKVDIWSLGIMAIEMI 210
Query: 165 AG 166
G
Sbjct: 211 EG 212
>pdb|3MBL|A Chain A, Crystal Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek 1) In Complex With Ligand And Mgadp
pdb|3PP1|A Chain A, Crystal Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek 1) In Complex With Ligand And Mgatp
Length = 328
Score = 42.0 bits (97), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 28/99 (28%), Positives = 47/99 (47%), Gaps = 6/99 (6%)
Query: 69 KIASDIVNSLAYLHFGFPRPIVLRNFKTQNILFNEENVAKWFDFLLSISIPEGETHITTD 128
K++ ++ L YL I+ R+ K NIL N K DF +S + + +
Sbjct: 108 KVSIAVIKGLTYLRE--KHKIMHRDVKPSNILVNSRGEIKLCDFGVSGQLIDS----MAN 161
Query: 129 RVIGTRGYSAPEYISICVLNEKSNVFSFGAFLFELLAGR 167
+GTR Y +PE + + +S+++S G L E+ GR
Sbjct: 162 SFVGTRSYMSPERLQGTHYSVQSDIWSMGLSLVEMAVGR 200
>pdb|3DV3|A Chain A, Mek1 With Pf-04622664 Bound
Length = 322
Score = 42.0 bits (97), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 28/99 (28%), Positives = 47/99 (47%), Gaps = 6/99 (6%)
Query: 69 KIASDIVNSLAYLHFGFPRPIVLRNFKTQNILFNEENVAKWFDFLLSISIPEGETHITTD 128
K++ ++ L YL I+ R+ K NIL N K DF +S + + +
Sbjct: 108 KVSIAVIKGLTYLRE--KHKIMHRDVKPSNILVNSRGEIKLCDFGVSGQLIDS----MAN 161
Query: 129 RVIGTRGYSAPEYISICVLNEKSNVFSFGAFLFELLAGR 167
+GTR Y +PE + + +S+++S G L E+ GR
Sbjct: 162 SFVGTRSYMSPERLQGTHYSVQSDIWSMGLSLVEMAVGR 200
>pdb|3EQP|B Chain B, Crystal Structure Of Ack1 With Compound T95
pdb|3EQP|A Chain A, Crystal Structure Of Ack1 With Compound T95
pdb|3EQR|A Chain A, Crystal Structure Of Ack1 With Compound T74
pdb|3EQR|B Chain B, Crystal Structure Of Ack1 With Compound T74
Length = 276
Score = 42.0 bits (97), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 49/232 (21%), Positives = 92/232 (39%), Gaps = 35/232 (15%)
Query: 17 INNITYAAQMSHNHILKRIGCCLQTPIPILVFQSVEYGTLRDCI-------FGAPLPRLK 69
I + + H ++++ G L P+ +V + G+L D + L R
Sbjct: 59 IREVNAMHSLDHRNLIRLYGVVLTPPMK-MVTELAPLGSLLDRLRKHQGHFLLGTLSR-- 115
Query: 70 IASDIVNSLAYLHFGFPRPIVLRNFKTQNILFNEENVAKWFDFLLSISIPEGETH-ITTD 128
A + + YL + + R+ +N+L ++ K DF L ++P+ + H + +
Sbjct: 116 YAVQVAEGMGYLE---SKRFIHRDLAARNLLLATRDLVKIGDFGLMRALPQNDDHYVMQE 172
Query: 129 RVIGTRGYSAPEYISICVLNEKSNVFSFGAFLFELLAGRIHIWDLLKDTHDHGCFFNEYL 188
+ APE + + S+ + FG L+E+ W G ++ L
Sbjct: 173 HRKVPFAWCAPESLKTRTFSHASDTWMFGVTLWEMFTYGQEPW--------IGLNGSQIL 224
Query: 189 KNYLEDKRFTGIPAPIIVQDIPCIEKEQQLHASAQLTLECVNNSPEDRPTMV 240
DK +P P +D P Q ++ + ++C + PEDRPT V
Sbjct: 225 HKI--DKEGERLPRP---EDCP-----QDIY---NVMVQCWAHKPEDRPTFV 263
>pdb|2IVV|A Chain A, Crystal Structure Of Phosphorylated Ret Tyrosine Kinase
Domain Complexed With The Inhibitor Pp1
Length = 314
Score = 42.0 bits (97), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 38/166 (22%), Positives = 70/166 (42%), Gaps = 27/166 (16%)
Query: 25 QMSHNHILKRIGCCLQTPIPILVFQSVEYGTLRDCI---------------------FGA 63
Q++H H++K G C Q +L+ + +YG+LR +
Sbjct: 82 QVNHPHVIKLYGACSQDGPLLLIVEYAKYGSLRGFLRESRKVGPGYLGSGGSRNSSSLDH 141
Query: 64 PLPRLKIASDIVNSLAY-----LHFGFPRPIVLRNFKTQNILFNEENVAKWFDFLLSISI 118
P R D++ S A+ + + +V R+ +NIL E K DF LS +
Sbjct: 142 PDERALTMGDLI-SFAWQISQGMQYLAEMSLVHRDLAARNILVAEGRKMKISDFGLSRDV 200
Query: 119 PEGETHITTDRVIGTRGYSAPEYISICVLNEKSNVFSFGAFLFELL 164
E ++ + + + A E + + +S+V+SFG L+E++
Sbjct: 201 YEEDSXVKRSQGRIPVKWMAIESLFDHIYTTQSDVWSFGVLLWEIV 246
>pdb|1U46|A Chain A, Crystal Structure Of The Unphosphorylated Kinase Domain Of
The Tyrosine Kinase Ack1
pdb|1U46|B Chain B, Crystal Structure Of The Unphosphorylated Kinase Domain Of
The Tyrosine Kinase Ack1
pdb|1U4D|A Chain A, Structure Of The Ack1 Kinase Domain Bound To
Debromohymenialdisine
pdb|1U4D|B Chain B, Structure Of The Ack1 Kinase Domain Bound To
Debromohymenialdisine
pdb|1U54|B Chain B, Crystal Structures Of The Phosphorylated And
Unphosphorylated Kinase Domains Of The Cdc42-Associated
Tyrosine Kinase Ack1 Bound To Amp-Pcp
Length = 291
Score = 42.0 bits (97), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 49/232 (21%), Positives = 92/232 (39%), Gaps = 35/232 (15%)
Query: 17 INNITYAAQMSHNHILKRIGCCLQTPIPILVFQSVEYGTLRDCI-------FGAPLPRLK 69
I + + H ++++ G L P+ +V + G+L D + L R
Sbjct: 69 IREVNAMHSLDHRNLIRLYGVVLTPPMK-MVTELAPLGSLLDRLRKHQGHFLLGTLSR-- 125
Query: 70 IASDIVNSLAYLHFGFPRPIVLRNFKTQNILFNEENVAKWFDFLLSISIPEGETH-ITTD 128
A + + YL + + R+ +N+L ++ K DF L ++P+ + H + +
Sbjct: 126 YAVQVAEGMGYLE---SKRFIHRDLAARNLLLATRDLVKIGDFGLMRALPQNDDHYVMQE 182
Query: 129 RVIGTRGYSAPEYISICVLNEKSNVFSFGAFLFELLAGRIHIWDLLKDTHDHGCFFNEYL 188
+ APE + + S+ + FG L+E+ W G ++ L
Sbjct: 183 HRKVPFAWCAPESLKTRTFSHASDTWMFGVTLWEMFTYGQEPW--------IGLNGSQIL 234
Query: 189 KNYLEDKRFTGIPAPIIVQDIPCIEKEQQLHASAQLTLECVNNSPEDRPTMV 240
DK +P P +D P Q ++ + ++C + PEDRPT V
Sbjct: 235 HKI--DKEGERLPRP---EDCP-----QDIY---NVMVQCWAHKPEDRPTFV 273
>pdb|2RFN|A Chain A, X-ray Structure Of C-met With Inhibitor.
pdb|2RFN|B Chain B, X-ray Structure Of C-met With Inhibitor.
pdb|2RFS|A Chain A, X-Ray Structure Of Su11274 Bound To C-Met
pdb|3CCN|A Chain A, X-Ray Structure Of C-Met With Triazolopyridazine
Inhibitor.
pdb|3CD8|A Chain A, X-Ray Structure Of C-Met With Triazolopyridazine
Inhibitor.
pdb|3EFJ|A Chain A, Structure Of C-Met With Pyrimidone Inhibitor 7
pdb|3EFJ|B Chain B, Structure Of C-Met With Pyrimidone Inhibitor 7
pdb|3EFK|A Chain A, Structure Of C-Met With Pyrimidone Inhibitor 50
pdb|3EFK|B Chain B, Structure Of C-Met With Pyrimidone Inhibitor 50
Length = 310
Score = 42.0 bits (97), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 37/148 (25%), Positives = 70/148 (47%), Gaps = 13/148 (8%)
Query: 27 SHNHILKRIGCCLQTP-IPILVFQSVEYGTLRDCIFGAPL-PRLK----IASDIVNSLAY 80
SH ++L +G CL++ P++V +++G LR+ I P +K + + Y
Sbjct: 89 SHPNVLSLLGICLRSEGSPLVVLPYMKHGDLRNFIRNETHNPTVKDLIGFGLQVAKGMKY 148
Query: 81 LHFGFPRPIVLRNFKTQNILFNEENVAKWFDFLLSISIPEGETHITTDRVIGTR---GYS 137
L + V R+ +N + +E+ K DF L+ + + E + ++ G + +
Sbjct: 149 LA---SKKFVHRDLAARNCMLDEKFTVKVADFGLARDMYDKEYYSVHNKT-GAKLPVKWM 204
Query: 138 APEYISICVLNEKSNVFSFGAFLFELLA 165
A E + KS+V+SFG L+EL+
Sbjct: 205 ALESLQTQKFTTKSDVWSFGVLLWELMT 232
>pdb|1VR2|A Chain A, Human Vascular Endothelial Growth Factor Receptor 2 (Kdr)
Kinase Domain
Length = 316
Score = 42.0 bits (97), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 26/85 (30%), Positives = 42/85 (49%)
Query: 81 LHFGFPRPIVLRNFKTQNILFNEENVAKWFDFLLSISIPEGETHITTDRVIGTRGYSAPE 140
+ F R + R+ +NIL +E+NV K DF L+ I + + + APE
Sbjct: 161 MEFLASRKCIHRDLAARNILLSEKNVVKICDFGLARDIYKDPDXVRKGDARLPLKWMAPE 220
Query: 141 YISICVLNEKSNVFSFGAFLFELLA 165
I V +S+V+SFG L+E+ +
Sbjct: 221 TIFDRVYTIQSDVWSFGVLLWEIFS 245
>pdb|1GJO|A Chain A, The Fgfr2 Tyrosine Kinase Domain
pdb|1OEC|A Chain A, Fgfr2 Kinase Domain
Length = 316
Score = 42.0 bits (97), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 35/154 (22%), Positives = 63/154 (40%), Gaps = 17/154 (11%)
Query: 27 SHNHILKRIGCCLQTPIPILVFQSVEYGTLRDCIFGAPLPRLKIASDI---------VNS 77
H +I+ +G C Q ++ + G LR+ + P ++ + DI
Sbjct: 91 KHKNIINLLGACTQDGPLYVIVEYASKGNLREYLRARRPPGMEYSYDINRVPEEQMTFKD 150
Query: 78 LAYLHFGFPRPI--------VLRNFKTQNILFNEENVAKWFDFLLSISIPEGETHITTDR 129
L + R + + R+ +N+L E NV K DF L+ I + + T
Sbjct: 151 LVSCTYQLARGMEYLASQKCIHRDLAARNVLVTENNVMKIADFGLARDINNIDYYKKTTN 210
Query: 130 VIGTRGYSAPEYISICVLNEKSNVFSFGAFLFEL 163
+ APE + V +S+V+SFG ++E+
Sbjct: 211 GRLPVKWMAPEALFDRVYTHQSDVWSFGVLMWEI 244
>pdb|4EWH|B Chain B, Co-Crystal Structure Of Ack1 With Inhibitor
pdb|4EWH|A Chain A, Co-Crystal Structure Of Ack1 With Inhibitor
Length = 275
Score = 42.0 bits (97), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 49/232 (21%), Positives = 92/232 (39%), Gaps = 35/232 (15%)
Query: 17 INNITYAAQMSHNHILKRIGCCLQTPIPILVFQSVEYGTLRDCI-------FGAPLPRLK 69
I + + H ++++ G L P+ +V + G+L D + L R
Sbjct: 59 IREVNAMHSLDHRNLIRLYGVVLTPPMK-MVTELAPLGSLLDRLRKHQGHFLLGTLSR-- 115
Query: 70 IASDIVNSLAYLHFGFPRPIVLRNFKTQNILFNEENVAKWFDFLLSISIPEGETH-ITTD 128
A + + YL + + R+ +N+L ++ K DF L ++P+ + H + +
Sbjct: 116 YAVQVAEGMGYLE---SKRFIHRDLAARNLLLATRDLVKIGDFGLMRALPQNDDHXVMQE 172
Query: 129 RVIGTRGYSAPEYISICVLNEKSNVFSFGAFLFELLAGRIHIWDLLKDTHDHGCFFNEYL 188
+ APE + + S+ + FG L+E+ W G ++ L
Sbjct: 173 HRKVPFAWCAPESLKTRTFSHASDTWMFGVTLWEMFTYGQEPW--------IGLNGSQIL 224
Query: 189 KNYLEDKRFTGIPAPIIVQDIPCIEKEQQLHASAQLTLECVNNSPEDRPTMV 240
DK +P P +D P Q ++ + ++C + PEDRPT V
Sbjct: 225 HKI--DKEGERLPRP---EDCP-----QDIY---NVMVQCWAHKPEDRPTFV 263
>pdb|2PVY|A Chain A, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic K659n Mutation Responsible For
An Unclassified Craniosynostosis Syndrome.
pdb|2PVY|B Chain B, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic K659n Mutation Responsible For
An Unclassified Craniosynostosis Syndrome.
pdb|2PVY|C Chain C, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic K659n Mutation Responsible For
An Unclassified Craniosynostosis Syndrome.
pdb|2PVY|D Chain D, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic K659n Mutation Responsible For
An Unclassified Craniosynostosis Syndrome
Length = 324
Score = 42.0 bits (97), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 35/154 (22%), Positives = 63/154 (40%), Gaps = 17/154 (11%)
Query: 27 SHNHILKRIGCCLQTPIPILVFQSVEYGTLRDCIFGAPLPRLKIASDI---------VNS 77
H +I+ +G C Q ++ + G LR+ + P ++ + DI
Sbjct: 99 KHKNIINLLGACTQDGPLYVIVEYASKGNLREYLRARRPPGMEYSYDINRVPEEQMTFKD 158
Query: 78 LAYLHFGFPRPI--------VLRNFKTQNILFNEENVAKWFDFLLSISIPEGETHITTDR 129
L + R + + R+ +N+L E NV K DF L+ I + + T
Sbjct: 159 LVSCTYQLARGMEYLASQKCIHRDLAARNVLVTENNVMKIADFGLARDINNIDYYKNTTN 218
Query: 130 VIGTRGYSAPEYISICVLNEKSNVFSFGAFLFEL 163
+ APE + V +S+V+SFG ++E+
Sbjct: 219 GRLPVKWMAPEALFDRVYTHQSDVWSFGVLMWEI 252
>pdb|2PZP|A Chain A, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic K526e Mutation Responsible For
Crouzon Syndrome
pdb|2PZP|B Chain B, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic K526e Mutation Responsible For
Crouzon Syndrome
Length = 324
Score = 42.0 bits (97), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 35/154 (22%), Positives = 63/154 (40%), Gaps = 17/154 (11%)
Query: 27 SHNHILKRIGCCLQTPIPILVFQSVEYGTLRDCIFGAPLPRLKIASDI---------VNS 77
H +I+ +G C Q ++ + G LR+ + P ++ + DI
Sbjct: 99 KHKNIINLLGACTQDGPLYVIVEYASKGNLREYLRARRPPGMEYSYDINRVPEEQMTFKD 158
Query: 78 LAYLHFGFPRPI--------VLRNFKTQNILFNEENVAKWFDFLLSISIPEGETHITTDR 129
L + R + + R+ +N+L E NV K DF L+ I + + T
Sbjct: 159 LVSCTYQLARGMEYLASQKCIHRDLAARNVLVTENNVMKIADFGLARDINNIDYYKKTTN 218
Query: 130 VIGTRGYSAPEYISICVLNEKSNVFSFGAFLFEL 163
+ APE + V +S+V+SFG ++E+
Sbjct: 219 GRLPVKWMAPEALFDRVYTHQSDVWSFGVLMWEI 252
>pdb|3F66|A Chain A, Human C-Met Kinase In Complex With Quinoxaline Inhibitor
pdb|3F66|B Chain B, Human C-Met Kinase In Complex With Quinoxaline Inhibitor
Length = 298
Score = 42.0 bits (97), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 37/148 (25%), Positives = 70/148 (47%), Gaps = 13/148 (8%)
Query: 27 SHNHILKRIGCCLQTP-IPILVFQSVEYGTLRDCIFGAPL-PRLK----IASDIVNSLAY 80
SH ++L +G CL++ P++V +++G LR+ I P +K + + Y
Sbjct: 84 SHPNVLSLLGICLRSEGSPLVVLPYMKHGDLRNFIRNETHNPTVKDLIGFGLQVAKGMKY 143
Query: 81 LHFGFPRPIVLRNFKTQNILFNEENVAKWFDFLLSISIPEGETHITTDRVIGTR---GYS 137
L + V R+ +N + +E+ K DF L+ + + E + ++ G + +
Sbjct: 144 LA---SKKFVHRDLAARNCMLDEKFTVKVADFGLARDMYDKEYYSVHNKT-GAKLPVKWM 199
Query: 138 APEYISICVLNEKSNVFSFGAFLFELLA 165
A E + KS+V+SFG L+EL+
Sbjct: 200 ALESLQTQKFTTKSDVWSFGVLLWELMT 227
>pdb|3RI1|A Chain A, Crystal Structure Of The Catalytic Domain Of Fgfr2 Kinase
In Complex With Arq 069
pdb|3RI1|B Chain B, Crystal Structure Of The Catalytic Domain Of Fgfr2 Kinase
In Complex With Arq 069
Length = 313
Score = 42.0 bits (97), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 35/154 (22%), Positives = 63/154 (40%), Gaps = 17/154 (11%)
Query: 27 SHNHILKRIGCCLQTPIPILVFQSVEYGTLRDCIFGAPLPRLKIASDI---------VNS 77
H +I+ +G C Q ++ + G LR+ + P ++ + DI
Sbjct: 88 KHKNIINLLGACTQDGPLYVIVEYASKGNLREYLRARRPPGMEYSYDINRVPEEQMTFKD 147
Query: 78 LAYLHFGFPRPI--------VLRNFKTQNILFNEENVAKWFDFLLSISIPEGETHITTDR 129
L + R + + R+ +N+L E NV K DF L+ I + + T
Sbjct: 148 LVSCTYQLARGMEYLASQKCIHRDLAARNVLVTENNVMKIADFGLARDINNIDYYKKTTN 207
Query: 130 VIGTRGYSAPEYISICVLNEKSNVFSFGAFLFEL 163
+ APE + V +S+V+SFG ++E+
Sbjct: 208 GRLPVKWMAPEALFDRVYTHQSDVWSFGVLMWEI 241
>pdb|3LQ8|A Chain A, Structure Of The Kinase Domain Of C-Met Bound To Xl880
(Gsk1
Length = 302
Score = 42.0 bits (97), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 37/148 (25%), Positives = 70/148 (47%), Gaps = 13/148 (8%)
Query: 27 SHNHILKRIGCCLQTP-IPILVFQSVEYGTLRDCIFGAPL-PRLK----IASDIVNSLAY 80
SH ++L +G CL++ P++V +++G LR+ I P +K + + Y
Sbjct: 87 SHPNVLSLLGICLRSEGSPLVVLPYMKHGDLRNFIRNETHNPTVKDLIGFGLQVAKGMKY 146
Query: 81 LHFGFPRPIVLRNFKTQNILFNEENVAKWFDFLLSISIPEGETHITTDRVIGTR---GYS 137
L + V R+ +N + +E+ K DF L+ + + E + ++ G + +
Sbjct: 147 LA---SKKFVHRDLAARNCMLDEKFTVKVADFGLARDMYDKEYYSVHNKT-GAKLPVKWM 202
Query: 138 APEYISICVLNEKSNVFSFGAFLFELLA 165
A E + KS+V+SFG L+EL+
Sbjct: 203 ALESLQTQKFTTKSDVWSFGVLLWELMT 230
>pdb|3B2T|A Chain A, Structure Of Phosphotransferase
pdb|3B2T|B Chain B, Structure Of Phosphotransferase
Length = 311
Score = 42.0 bits (97), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 35/154 (22%), Positives = 63/154 (40%), Gaps = 17/154 (11%)
Query: 27 SHNHILKRIGCCLQTPIPILVFQSVEYGTLRDCIFGAPLPRLKIASDI---------VNS 77
H +I+ +G C Q ++ + G LR+ + P ++ + DI
Sbjct: 86 KHKNIINLLGACTQDGPLYVIVEYASKGNLREYLRARRPPGMEYSYDINRVPEEQMTFKD 145
Query: 78 LAYLHFGFPRPI--------VLRNFKTQNILFNEENVAKWFDFLLSISIPEGETHITTDR 129
L + R + + R+ +N+L E NV K DF L+ I + + T
Sbjct: 146 LVSCTYQLARGMEYLASQKCIHRDLTARNVLVTENNVMKIADFGLARDINNIDYYKKTTN 205
Query: 130 VIGTRGYSAPEYISICVLNEKSNVFSFGAFLFEL 163
+ APE + V +S+V+SFG ++E+
Sbjct: 206 GRLPVKWMAPEALFDRVYTHQSDVWSFGVLMWEI 239
>pdb|2WGJ|A Chain A, X-Ray Structure Of Pf-02341066 Bound To The Kinase Domain
Of C-Met
pdb|2WKM|A Chain A, X-Ray Structure Of Pha-00665752 Bound To The Kinase Domain
Of C-Met
pdb|3ZXZ|A Chain A, X-Ray Structure Of Pf-04217903 Bound To The Kinase Domain
Of C-Met
pdb|3ZZE|A Chain A, Crystal Structure Of C-Met Kinase Domain In Complex With
N'-
((3z)-4-Chloro-7-Methyl-2-Oxo-1,2-Dihydro-3h-Indol-3-
Ylidene)-2-(4-Hydroxyphenyl)propanohydrazide
pdb|4AOI|A Chain A, Crystal Structure Of C-Met Kinase Domain In Complex With
4-( 3-((1h-
Pyrrolo(2,3-B)pyridin-3-Yl)methyl)-(1,2,4)triazolo(
4,3-B)(1,2,4) Triazin-6-Yl)benzonitrile
pdb|4AP7|A Chain A, Crystal Structure Of C-Met Kinase Domain In Complex With
4-( (6-(4-
Fluorophenyl)-(1,2,4)triazolo(4,3-B)(1,2,
4)triazin-3-Yl)methyl) Phenol
Length = 306
Score = 42.0 bits (97), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 37/148 (25%), Positives = 70/148 (47%), Gaps = 13/148 (8%)
Query: 27 SHNHILKRIGCCLQTP-IPILVFQSVEYGTLRDCIFGAPL-PRLK----IASDIVNSLAY 80
SH ++L +G CL++ P++V +++G LR+ I P +K + + Y
Sbjct: 86 SHPNVLSLLGICLRSEGSPLVVLPYMKHGDLRNFIRNETHNPTVKDLIGFGLQVAKGMKY 145
Query: 81 LHFGFPRPIVLRNFKTQNILFNEENVAKWFDFLLSISIPEGETHITTDRVIGTR---GYS 137
L + V R+ +N + +E+ K DF L+ + + E + ++ G + +
Sbjct: 146 LA---SKKFVHRDLAARNCMLDEKFTVKVADFGLARDMYDKEYYSVHNKT-GAKLPVKWM 201
Query: 138 APEYISICVLNEKSNVFSFGAFLFELLA 165
A E + KS+V+SFG L+EL+
Sbjct: 202 ALESLQTQKFTTKSDVWSFGVLLWELMT 229
>pdb|1U54|A Chain A, Crystal Structures Of The Phosphorylated And
Unphosphorylated Kinase Domains Of The Cdc42-Associated
Tyrosine Kinase Ack1 Bound To Amp-Pcp
Length = 291
Score = 42.0 bits (97), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 49/232 (21%), Positives = 92/232 (39%), Gaps = 35/232 (15%)
Query: 17 INNITYAAQMSHNHILKRIGCCLQTPIPILVFQSVEYGTLRDCI-------FGAPLPRLK 69
I + + H ++++ G L P+ +V + G+L D + L R
Sbjct: 69 IREVNAMHSLDHRNLIRLYGVVLTPPMK-MVTELAPLGSLLDRLRKHQGHFLLGTLSR-- 125
Query: 70 IASDIVNSLAYLHFGFPRPIVLRNFKTQNILFNEENVAKWFDFLLSISIPEGETH-ITTD 128
A + + YL + + R+ +N+L ++ K DF L ++P+ + H + +
Sbjct: 126 YAVQVAEGMGYLE---SKRFIHRDLAARNLLLATRDLVKIGDFGLMRALPQNDDHXVMQE 182
Query: 129 RVIGTRGYSAPEYISICVLNEKSNVFSFGAFLFELLAGRIHIWDLLKDTHDHGCFFNEYL 188
+ APE + + S+ + FG L+E+ W G ++ L
Sbjct: 183 HRKVPFAWCAPESLKTRTFSHASDTWMFGVTLWEMFTYGQEPW--------IGLNGSQIL 234
Query: 189 KNYLEDKRFTGIPAPIIVQDIPCIEKEQQLHASAQLTLECVNNSPEDRPTMV 240
DK +P P +D P Q ++ + ++C + PEDRPT V
Sbjct: 235 HKI--DKEGERLPRP---EDCP-----QDIY---NVMVQCWAHKPEDRPTFV 273
>pdb|3OCT|A Chain A, Crystal Structure Of Bruton's Tyrosine Kinase Mutant V555r
In Complex With Dasatinib
Length = 265
Score = 41.6 bits (96), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 25/104 (24%), Positives = 50/104 (48%), Gaps = 16/104 (15%)
Query: 68 LKIASDIVNSLAYLHFGFPRPIVLRNFKTQNILFNEENVAKWFDFLLSISIPEGETHITT 127
L++ D+ ++ YL + + R+ +N L N++ V K DF LS ++
Sbjct: 108 LEMCKDVCEAMEYLE---SKQFLHRDLAARNCLVNDQGVVKVSDFGLS-------RYVLD 157
Query: 128 DRVIGTRG------YSAPEYISICVLNEKSNVFSFGAFLFELLA 165
D +RG +S PE + + KS++++FG ++E+ +
Sbjct: 158 DEYTSSRGSKFPVRWSPPEVLMYSKFSSKSDIWAFGVLMWEIYS 201
>pdb|3Q6U|A Chain A, Structure Of The Apo Met Receptor Kinase In The
Dually-Phosphorylated, Activated State
Length = 308
Score = 41.6 bits (96), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 37/148 (25%), Positives = 70/148 (47%), Gaps = 13/148 (8%)
Query: 27 SHNHILKRIGCCLQTP-IPILVFQSVEYGTLRDCIFGAPL-PRLK----IASDIVNSLAY 80
SH ++L +G CL++ P++V +++G LR+ I P +K + + Y
Sbjct: 89 SHPNVLSLLGICLRSEGSPLVVLPYMKHGDLRNFIRNETHNPTVKDLIGFGLQVAKGMKY 148
Query: 81 LHFGFPRPIVLRNFKTQNILFNEENVAKWFDFLLSISIPEGETHITTDRVIGTR---GYS 137
L + V R+ +N + +E+ K DF L+ + + E + ++ G + +
Sbjct: 149 LA---SKKFVHRDLAARNCMLDEKFTVKVADFGLARDMYDKEYYSVHNKT-GAKLPVKWM 204
Query: 138 APEYISICVLNEKSNVFSFGAFLFELLA 165
A E + KS+V+SFG L+EL+
Sbjct: 205 ALESLQTQKFTTKSDVWSFGVLLWELMT 232
>pdb|2PZ5|A Chain A, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic N549t Mutation Responsible For
Pfeiffer Syndrome
pdb|2PZ5|B Chain B, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic N549t Mutation Responsible For
Pfeiffer Syndrome
Length = 324
Score = 41.6 bits (96), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 35/154 (22%), Positives = 63/154 (40%), Gaps = 17/154 (11%)
Query: 27 SHNHILKRIGCCLQTPIPILVFQSVEYGTLRDCIFGAPLPRLKIASDI---------VNS 77
H +I+ +G C Q ++ + G LR+ + P ++ + DI
Sbjct: 99 KHKNIITLLGACTQDGPLYVIVEYASKGNLREYLRARRPPGMEYSYDINRVPEEQMTFKD 158
Query: 78 LAYLHFGFPRPI--------VLRNFKTQNILFNEENVAKWFDFLLSISIPEGETHITTDR 129
L + R + + R+ +N+L E NV K DF L+ I + + T
Sbjct: 159 LVSCTYQLARGMEYLASQKCIHRDLAARNVLVTENNVMKIADFGLARDINNIDYYKKTTN 218
Query: 130 VIGTRGYSAPEYISICVLNEKSNVFSFGAFLFEL 163
+ APE + V +S+V+SFG ++E+
Sbjct: 219 GRLPVKWMAPEALFDRVYTHQSDVWSFGVLMWEI 252
>pdb|3FXZ|A Chain A, Crystal Structure Of Pak1 Kinase Domain With Ruthenium
Complex Lambda-Fl172
pdb|3FY0|A Chain A, Crystal Structure Of Pak1 Kinase Domain With Ruthenium
Complex Dw1
pdb|4DAW|A Chain A, Crystal Structure Of Pak1 Kinase Domain With The Ruthenium
Phthalimide Complex
Length = 297
Score = 41.6 bits (96), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 28/121 (23%), Positives = 54/121 (44%), Gaps = 2/121 (1%)
Query: 46 LVFQSVEYGTLRDCIFGAPLPRLKIASDIVNSLAYLHFGFPRPIVLRNFKTQNILFNEEN 105
+V + + G+L D + + +IA+ L L F ++ R+ K+ NIL +
Sbjct: 94 VVMEYLAGGSLTDVVTETCMDEGQIAAVCRECLQALEFLHSNQVIHRDIKSDNILLGMDG 153
Query: 106 VAKWFDFLLSISIPEGETHITTDRVIGTRGYSAPEYISICVLNEKSNVFSFGAFLFELLA 165
K DF I ++ + ++GT + APE ++ K +++S G E++
Sbjct: 154 SVKLTDFGFCAQITPEQSKRSX--MVGTPYWMAPEVVTRKAYGPKVDIWSLGIMAIEMIE 211
Query: 166 G 166
G
Sbjct: 212 G 212
>pdb|1OVE|A Chain A, The Structure Of P38 Alpha In Complex With A
Dihydroquinolinone
pdb|1R3C|A Chain A, The Structure Of P38alpha C162s Mutant
pdb|2I0H|A Chain A, The Structure Of P38alpha In Complex With An
Arylpyridazinone
pdb|3GC7|A Chain A, The Structure Of P38alpha In Complex With A
Dihydroquinazolinone
pdb|3NEW|A Chain A, P38-Alpha Complexed With Compound 10
Length = 366
Score = 41.6 bits (96), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 31/98 (31%), Positives = 46/98 (46%), Gaps = 15/98 (15%)
Query: 74 IVNSLAYLHFGFPRPIVLRNFKTQNILFNEENVAKWFDFLLSISIPEGETHITTDRVIG- 132
I+ L Y+H I+ R+ K N+ NE++ K DF G T D + G
Sbjct: 140 ILRGLKYIHSA---DIIHRDLKPSNLAVNEDSELKILDF--------GLARHTDDEMTGY 188
Query: 133 --TRGYSAPE-YISICVLNEKSNVFSFGAFLFELLAGR 167
TR Y APE ++ N+ +++S G + ELL GR
Sbjct: 189 VATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGR 226
>pdb|3K54|A Chain A, Structures Of Human Bruton's Tyrosine Kinase In Active And
Inactive Conformations Suggests A Mechanism Of
Activation For Tec Family Kinases
Length = 283
Score = 41.6 bits (96), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 24/98 (24%), Positives = 49/98 (50%), Gaps = 4/98 (4%)
Query: 68 LKIASDIVNSLAYLHFGFPRPIVLRNFKTQNILFNEENVAKWFDFLLSISIPEGETHITT 127
L++ D+ ++ YL + + R+ +N L N++ V K DF LS + + E +
Sbjct: 123 LEMCKDVCEAMEYLE---SKQFLHRDLAARNCLVNDQGVVKVSDFGLSRYVLDDEETSSV 179
Query: 128 DRVIGTRGYSAPEYISICVLNEKSNVFSFGAFLFELLA 165
R +S PE + + KS++++FG ++E+ +
Sbjct: 180 GSKFPVR-WSPPEVLMYSKFSSKSDIWAFGVLMWEIYS 216
>pdb|2WD1|A Chain A, Human C-Met Kinase In Complex With Azaindole Inhibitor
Length = 292
Score = 41.6 bits (96), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 37/148 (25%), Positives = 70/148 (47%), Gaps = 13/148 (8%)
Query: 27 SHNHILKRIGCCLQTP-IPILVFQSVEYGTLRDCIFGAPL-PRLK----IASDIVNSLAY 80
SH ++L +G CL++ P++V +++G LR+ I P +K + + Y
Sbjct: 81 SHPNVLSLLGICLRSEGSPLVVLPYMKHGDLRNFIRNETHNPTVKDLIGFGLQVAKGMKY 140
Query: 81 LHFGFPRPIVLRNFKTQNILFNEENVAKWFDFLLSISIPEGETHITTDRVIGTR---GYS 137
L + V R+ +N + +E+ K DF L+ + + E + ++ G + +
Sbjct: 141 LA---SKKFVHRDLAARNCMLDEKFTVKVADFGLARDMYDKEYYSVHNKT-GAKLPVKWM 196
Query: 138 APEYISICVLNEKSNVFSFGAFLFELLA 165
A E + KS+V+SFG L+EL+
Sbjct: 197 ALESLQTQKFTTKSDVWSFGVLLWELMT 224
>pdb|3Q52|A Chain A, Structure Of Phosphorylated Pak1 Kinase Domain
pdb|3Q53|A Chain A, Structure Of Phosphorylated Pak1 Kinase Domain In Complex
With Atp
Length = 306
Score = 41.6 bits (96), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 28/121 (23%), Positives = 54/121 (44%), Gaps = 2/121 (1%)
Query: 46 LVFQSVEYGTLRDCIFGAPLPRLKIASDIVNSLAYLHFGFPRPIVLRNFKTQNILFNEEN 105
+V + + G+L D + + +IA+ L L F ++ R+ K+ NIL +
Sbjct: 95 VVMEYLAGGSLTDVVTETCMDEGQIAAVCRECLQALEFLHSNQVIHRDIKSDNILLGMDG 154
Query: 106 VAKWFDFLLSISIPEGETHITTDRVIGTRGYSAPEYISICVLNEKSNVFSFGAFLFELLA 165
K DF I ++ + ++GT + APE ++ K +++S G E++
Sbjct: 155 SVKLTDFGFCAQITPEQSKRSX--MVGTPYWMAPEVVTRKAYGPKVDIWSLGIMAIEMIE 212
Query: 166 G 166
G
Sbjct: 213 G 213
>pdb|2G15|A Chain A, Structural Characterization Of Autoinhibited C-Met Kinase
pdb|3RHK|A Chain A, Crystal Structure Of The Catalytic Domain Of C-Met Kinase
In Complex With Arq 197
pdb|3RHK|B Chain B, Crystal Structure Of The Catalytic Domain Of C-Met Kinase
In Complex With Arq 197
Length = 318
Score = 41.6 bits (96), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 37/148 (25%), Positives = 70/148 (47%), Gaps = 13/148 (8%)
Query: 27 SHNHILKRIGCCLQTP-IPILVFQSVEYGTLRDCIFGAPL-PRLK----IASDIVNSLAY 80
SH ++L +G CL++ P++V +++G LR+ I P +K + + Y
Sbjct: 107 SHPNVLSLLGICLRSEGSPLVVLPYMKHGDLRNFIRNETHNPTVKDLIGFGLQVAKGMKY 166
Query: 81 LHFGFPRPIVLRNFKTQNILFNEENVAKWFDFLLSISIPEGETHITTDRVIGTR---GYS 137
L + V R+ +N + +E+ K DF L+ + + E + ++ G + +
Sbjct: 167 LA---SKKFVHRDLAARNCMLDEKFTVKVADFGLARDMYDKEYYSVHNKT-GAKLPVKWM 222
Query: 138 APEYISICVLNEKSNVFSFGAFLFELLA 165
A E + KS+V+SFG L+EL+
Sbjct: 223 ALESLQTQKFTTKSDVWSFGVLLWELMT 250
>pdb|4HZS|A Chain A, Crystal Structure Of Ack1 Kinase Domain With C-terminal
Sh3 Domain
pdb|4HZS|B Chain B, Crystal Structure Of Ack1 Kinase Domain With C-terminal
Sh3 Domain
pdb|4HZS|C Chain C, Crystal Structure Of Ack1 Kinase Domain With C-terminal
Sh3 Domain
pdb|4HZS|D Chain D, Crystal Structure Of Ack1 Kinase Domain With C-terminal
Sh3 Domain
Length = 341
Score = 41.6 bits (96), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 49/232 (21%), Positives = 92/232 (39%), Gaps = 35/232 (15%)
Query: 17 INNITYAAQMSHNHILKRIGCCLQTPIPILVFQSVEYGTLRDCI-------FGAPLPRLK 69
I + + H ++++ G L P+ +V + G+L D + L R
Sbjct: 63 IREVNAMHSLDHRNLIRLYGVVLTPPMK-MVTELAPLGSLLDRLRKHQGHFLLGTLSR-- 119
Query: 70 IASDIVNSLAYLHFGFPRPIVLRNFKTQNILFNEENVAKWFDFLLSISIPEGETH-ITTD 128
A + + YL + + R+ +N+L ++ K DF L ++P+ + H + +
Sbjct: 120 YAVQVAEGMGYLE---SKRFIHRDLAARNLLLATRDLVKIGDFGLMRALPQNDDHYVMQE 176
Query: 129 RVIGTRGYSAPEYISICVLNEKSNVFSFGAFLFELLAGRIHIWDLLKDTHDHGCFFNEYL 188
+ APE + + S+ + FG L+E+ W G ++ L
Sbjct: 177 HRKVPFAWCAPESLKTRTFSHASDTWMFGVTLWEMFTYGQEPW--------IGLNGSQIL 228
Query: 189 KNYLEDKRFTGIPAPIIVQDIPCIEKEQQLHASAQLTLECVNNSPEDRPTMV 240
DK +P P +D P Q ++ + ++C + PEDRPT V
Sbjct: 229 HKI--DKEGERLPRP---EDCP-----QDIY---NVMVQCWAHKPEDRPTFV 267
>pdb|2Y8O|A Chain A, Crystal Structure Of Human P38alpha Complexed With A Mapk
Docking Peptide
Length = 362
Score = 41.6 bits (96), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 31/98 (31%), Positives = 46/98 (46%), Gaps = 15/98 (15%)
Query: 74 IVNSLAYLHFGFPRPIVLRNFKTQNILFNEENVAKWFDFLLSISIPEGETHITTDRVIG- 132
I+ L Y+H I+ R+ K N+ NE++ K DF G T D + G
Sbjct: 136 ILRGLKYIHSA---DIIHRDLKPSNLAVNEDSELKILDF--------GLARHTDDEMTGY 184
Query: 133 --TRGYSAPE-YISICVLNEKSNVFSFGAFLFELLAGR 167
TR Y APE ++ N+ +++S G + ELL GR
Sbjct: 185 VATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGR 222
>pdb|4AN2|A Chain A, Crystal Structures Of Human Mek1 With Carboxamide-Based
Allosteric Inhibitor Xl518 (Gdc-0973), Or Related
Analogs.
pdb|4AN3|A Chain A, Crystal Structures Of Human Mek1 With Carboxamide-Based
Allosteric Inhibitor Xl518 (Gdc-0973), Or Related
Analogs.
pdb|4AN9|A Chain A, Crystal Structures Of Human Mek1 With Carboxamide-Based
Allosteric Inhibitor Xl518 (Gdc-0973), Or Related
Analogs.
pdb|4ANB|A Chain A, Crystal Structures Of Human Mek1 With Carboxamide-Based
Allosteric Inhibitor Xl518 (Gdc-0973), Or Related
Analogs
Length = 301
Score = 41.6 bits (96), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 28/99 (28%), Positives = 47/99 (47%), Gaps = 6/99 (6%)
Query: 69 KIASDIVNSLAYLHFGFPRPIVLRNFKTQNILFNEENVAKWFDFLLSISIPEGETHITTD 128
K++ ++ L YL I+ R+ K NIL N K DF +S + + +
Sbjct: 111 KVSIAVIKGLTYLRE--KHKIMHRDVKPSNILVNSRGEIKLCDFGVSGQLIDE----MAN 164
Query: 129 RVIGTRGYSAPEYISICVLNEKSNVFSFGAFLFELLAGR 167
+GTR Y +PE + + +S+++S G L E+ GR
Sbjct: 165 EFVGTRSYMSPERLQGTHYSVQSDIWSMGLSLVEMAVGR 203
>pdb|2BDW|A Chain A, Crystal Structure Of The Auto-Inhibited Kinase Domain Of
CalciumCALMODULIN ACTIVATED KINASE II
pdb|2BDW|B Chain B, Crystal Structure Of The Auto-Inhibited Kinase Domain Of
CalciumCALMODULIN ACTIVATED KINASE II
Length = 362
Score = 41.6 bits (96), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 44/161 (27%), Positives = 69/161 (42%), Gaps = 15/161 (9%)
Query: 25 QMSHNHILKRIGCCLQTPIPILVFQSVEYGTLRDCIFGAPLPRLKIAS----DIVNSLAY 80
++ H +I++ + LVF V G L + I AS I+ S+AY
Sbjct: 84 KLQHPNIVRLHDSIQEESFHYLVFDLVTGGELFEDIVAREFYSEADASHCIQQILESIAY 143
Query: 81 LHFGFPRPIVLRNFKTQNILFNEEN---VAKWFDFLLSISIPEGETHITTDRVIGTRGYS 137
H IV RN K +N+L + K DF L+I + + E GT GY
Sbjct: 144 CH---SNGIVHRNLKPENLLLASKAKGAAVKLADFGLAIEVNDSEAW---HGFAGTPGYL 197
Query: 138 APEYISICVLNEKSNVFSFGAFLFELLAGRIHIWDLLKDTH 178
+PE + ++ ++++ G L+ LL G WD +D H
Sbjct: 198 SPEVLKKDPYSKPVDIWACGVILYILLVGYPPFWD--EDQH 236
>pdb|1I44|A Chain A, Crystallographic Studies Of An Activation Loop Mutant Of
The Insulin Receptor Tyrosine Kinase
Length = 306
Score = 41.6 bits (96), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 33/163 (20%), Positives = 74/163 (45%), Gaps = 17/163 (10%)
Query: 17 INNITYAAQMSHNHILKRIGCCLQTPIPILVFQSVEYGTLRDCIF----------GAPLP 66
+N + + +H+++ +G + ++V + + +G L+ + G P P
Sbjct: 68 LNEASVMKGFTCHHVVRLLGVVSKGQPTLVVMELMAHGDLKSYLRSLRPEAENNPGRPPP 127
Query: 67 RLK----IASDIVNSLAYLHFGFPRPIVLRNFKTQNILFNEENVAKWFDFLLSISIPEGE 122
L+ +A++I + +AYL+ + V R+ +N + + K DF ++ I E
Sbjct: 128 TLQEMIQMAAEIADGMAYLN---AKKFVHRDLAARNCMVAHDFTVKIGDFGMTRDIYETA 184
Query: 123 THITTDRVIGTRGYSAPEYISICVLNEKSNVFSFGAFLFELLA 165
+ + + + APE + V S+++SFG L+E+ +
Sbjct: 185 YYRKGGKGLLPVRWMAPESLKDGVFTTSSDMWSFGVVLWEITS 227
>pdb|2PVF|A Chain A, Crystal Structure Of Tyrosine Phosphorylated Activated Fgf
Receptor 2 (Fgfr2) Kinase Domain In Complex With Atp
Analog And Substrate Peptide
Length = 334
Score = 41.6 bits (96), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 35/154 (22%), Positives = 62/154 (40%), Gaps = 17/154 (11%)
Query: 27 SHNHILKRIGCCLQTPIPILVFQSVEYGTLRDCIFGAPLPRLKIASDI---------VNS 77
H +I+ +G C Q ++ + G LR+ + P ++ + DI
Sbjct: 99 KHKNIINLLGACTQDGPLYVIVEYASKGNLREYLRARRPPGMEXSYDINRVPEEQMTFKD 158
Query: 78 LAYLHFGFPRPI--------VLRNFKTQNILFNEENVAKWFDFLLSISIPEGETHITTDR 129
L + R + + R+ +N+L E NV K DF L+ I + T
Sbjct: 159 LVSCTYQLARGMEYLASQKCIHRDLAARNVLVTENNVMKIADFGLARDINNIDXXKKTTN 218
Query: 130 VIGTRGYSAPEYISICVLNEKSNVFSFGAFLFEL 163
+ APE + V +S+V+SFG ++E+
Sbjct: 219 GRLPVKWMAPEALFDRVYTHQSDVWSFGVLMWEI 252
>pdb|3Q6W|A Chain A, Structure Of Dually-phosphorylated Met Receptor Kinase In
Complex With An Mk-2461 Analog With Specificity For The
Activated Receptor
pdb|3R7O|A Chain A, Structure Of Dually Phosphorylated C-Met Receptor Kinase
In Complex With An Mk-2461 Analog
Length = 307
Score = 41.6 bits (96), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 38/148 (25%), Positives = 69/148 (46%), Gaps = 13/148 (8%)
Query: 27 SHNHILKRIGCCLQTP-IPILVFQSVEYGTLRDCIFGAPL-PRLK----IASDIVNSLAY 80
SH ++L +G CL++ P++V +++G LR+ I P +K + + Y
Sbjct: 88 SHPNVLSLLGICLRSEGSPLVVLPYMKHGDLRNFIRNETHNPTVKDLIGFGLQVAKGMKY 147
Query: 81 LHFGFPRPIVLRNFKTQNILFNEENVAKWFDFLLSISIPEGE---THITTDRVIGTRGYS 137
L + V R+ +N + +E+ K DF L+ + + E H T + + +
Sbjct: 148 LA---SKKFVHRDLAARNCMLDEKFTVKVADFGLARDMYDKEXXSVHNKTGAKLPVK-WM 203
Query: 138 APEYISICVLNEKSNVFSFGAFLFELLA 165
A E + KS+V+SFG L+EL+
Sbjct: 204 ALESLQTQKFTTKSDVWSFGVLLWELMT 231
>pdb|4GG5|A Chain A, Crystal Structure Of Cmet In Complex With Novel Inhibitor
pdb|4GG7|A Chain A, Crystal Structure Of Cmet In Complex With Novel Inhibitor
Length = 319
Score = 41.6 bits (96), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 37/148 (25%), Positives = 70/148 (47%), Gaps = 13/148 (8%)
Query: 27 SHNHILKRIGCCLQTP-IPILVFQSVEYGTLRDCIFGAPL-PRLK----IASDIVNSLAY 80
SH ++L +G CL++ P++V +++G LR+ I P +K + + Y
Sbjct: 108 SHPNVLSLLGICLRSEGSPLVVLPYMKHGDLRNFIRNETHNPTVKDLIGFGLQVAKGMKY 167
Query: 81 LHFGFPRPIVLRNFKTQNILFNEENVAKWFDFLLSISIPEGETHITTDRVIGTR---GYS 137
L + V R+ +N + +E+ K DF L+ + + E + ++ G + +
Sbjct: 168 LA---SKKFVHRDLAARNCMLDEKFTVKVADFGLARDMYDKEYYSVHNKT-GAKLPVKWM 223
Query: 138 APEYISICVLNEKSNVFSFGAFLFELLA 165
A E + KS+V+SFG L+EL+
Sbjct: 224 ALESLQTQKFTTKSDVWSFGVLLWELMT 251
>pdb|2PWL|A Chain A, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic N549h Mutation Responsible For
Crouzon Syndrome.
pdb|2PWL|B Chain B, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic N549h Mutation Responsible For
Crouzon Syndrome
Length = 324
Score = 41.6 bits (96), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 35/154 (22%), Positives = 63/154 (40%), Gaps = 17/154 (11%)
Query: 27 SHNHILKRIGCCLQTPIPILVFQSVEYGTLRDCIFGAPLPRLKIASDI---------VNS 77
H +I+ +G C Q ++ + G LR+ + P ++ + DI
Sbjct: 99 KHKNIIHLLGACTQDGPLYVIVEYASKGNLREYLRARRPPGMEYSYDINRVPEEQMTFKD 158
Query: 78 LAYLHFGFPRPI--------VLRNFKTQNILFNEENVAKWFDFLLSISIPEGETHITTDR 129
L + R + + R+ +N+L E NV K DF L+ I + + T
Sbjct: 159 LVSCTYQLARGMEYLASQKCIHRDLAARNVLVTENNVMKIADFGLARDINNIDYYKKTTN 218
Query: 130 VIGTRGYSAPEYISICVLNEKSNVFSFGAFLFEL 163
+ APE + V +S+V+SFG ++E+
Sbjct: 219 GRLPVKWMAPEALFDRVYTHQSDVWSFGVLMWEI 252
>pdb|3CLY|A Chain A, Crystal Structure Of Fgf Receptor 2 (Fgfr2) Kinase Domains
Trapped In Trans-Phosphorylation Reaction
Length = 334
Score = 41.6 bits (96), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 35/154 (22%), Positives = 62/154 (40%), Gaps = 17/154 (11%)
Query: 27 SHNHILKRIGCCLQTPIPILVFQSVEYGTLRDCIFGAPLPRLKIASDI---------VNS 77
H +I+ +G C Q ++ + G LR+ + P ++ + DI
Sbjct: 99 KHKNIINLLGACTQDGPLYVIVEYASKGNLREYLRARRPPGMEYSYDINRVPEEQMTFKD 158
Query: 78 LAYLHFGFPRPI--------VLRNFKTQNILFNEENVAKWFDFLLSISIPEGETHITTDR 129
L + R + + R+ +N+L E NV K DF L+ I + T
Sbjct: 159 LVSCTYQLARGMEYLASQKCIHRDLAARNVLVTENNVMKIADFGLARDINNIDXXKKTTN 218
Query: 130 VIGTRGYSAPEYISICVLNEKSNVFSFGAFLFEL 163
+ APE + V +S+V+SFG ++E+
Sbjct: 219 GRLPVKWMAPEALFDRVYTHQSDVWSFGVLMWEI 252
>pdb|3OHT|A Chain A, Crystal Structure Of Salmo Salar P38alpha
pdb|3OHT|B Chain B, Crystal Structure Of Salmo Salar P38alpha
Length = 389
Score = 41.6 bits (96), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 42/155 (27%), Positives = 64/155 (41%), Gaps = 27/155 (17%)
Query: 74 IVNSLAYLHFGFPRPIVLRNFKTQNILFNEENVAKWFDFLLSISIPEGETHITTDRVIG- 132
I+ L Y+H I+ R+ K N+ NE+ K DF G T D + G
Sbjct: 163 ILRGLKYIHSA---DIIHRDLKPSNLAVNEDCELKILDF--------GLARHTDDEMTGY 211
Query: 133 --TRGYSAPE-YISICVLNEKSNVFSFGAFLFELLAGRIHIWDLLKDTHDHGCFFNEYLK 189
TR Y APE ++ N +++S G + ELL GR L T DH + +
Sbjct: 212 VATRWYRAPEIMLNWMHYNMTVDIWSVGCIMAELLTGRT----LFPGT-DHINQLQQIM- 265
Query: 190 NYLEDKRFTGIPAPIIVQDIPCIEKEQQLHASAQL 224
R TG P ++ +P E +++ Q+
Sbjct: 266 ------RLTGTPPASVISRMPSHEARNYINSLPQM 294
>pdb|2ZV7|A Chain A, Lyn Tyrosine Kinase Domain, Apo Form
pdb|2ZV8|A Chain A, Lyn Tyrosine Kinase Domain-Amp-Pnp Complex
pdb|2ZV9|A Chain A, Lyn Tyrosine Kinase Domain-Pp2 Complex
pdb|2ZVA|A Chain A, Lyn Tyrosine Kinase Domain-dasatinib Complex
Length = 279
Score = 41.6 bits (96), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 31/106 (29%), Positives = 54/106 (50%), Gaps = 6/106 (5%)
Query: 65 LPRL-KIASDIVNSLAYLHFGFPRPIVLRNFKTQNILFNEENVAKWFDFLLSISIPEGET 123
LP+L ++ I +AY+ + + R+ + N+L +E + K DF L+ I + E
Sbjct: 108 LPKLIDFSAQIAEGMAYIE---RKNYIHRDLRAANVLVSESLMCKIADFGLARVIEDNEY 164
Query: 124 HITTDRVIGTRGYSAPEYISICVLNEKSNVFSFGAFLFELLA-GRI 168
+ ++APE I+ KSNV+SFG L+E++ G+I
Sbjct: 165 TAREGAKFPIK-WTAPEAINFGCFTIKSNVWSFGILLYEIVTYGKI 209
>pdb|2PSQ|A Chain A, Crystal Structure Of Unphosphorylated Unactivated Wild
Type Fgf Receptor 2 (Fgfr2) Kinase Domain
pdb|2PSQ|B Chain B, Crystal Structure Of Unphosphorylated Unactivated Wild
Type Fgf Receptor 2 (Fgfr2) Kinase Domain
Length = 370
Score = 41.6 bits (96), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 35/154 (22%), Positives = 63/154 (40%), Gaps = 17/154 (11%)
Query: 27 SHNHILKRIGCCLQTPIPILVFQSVEYGTLRDCIFGAPLPRLKIASDI---------VNS 77
H +I+ +G C Q ++ + G LR+ + P ++ + DI
Sbjct: 145 KHKNIINLLGACTQDGPLYVIVEYASKGNLREYLRARRPPGMEYSYDINRVPEEQMTFKD 204
Query: 78 LAYLHFGFPRPI--------VLRNFKTQNILFNEENVAKWFDFLLSISIPEGETHITTDR 129
L + R + + R+ +N+L E NV K DF L+ I + + T
Sbjct: 205 LVSCTYQLARGMEYLASQKCIHRDLAARNVLVTENNVMKIADFGLARDINNIDYYKKTTN 264
Query: 130 VIGTRGYSAPEYISICVLNEKSNVFSFGAFLFEL 163
+ APE + V +S+V+SFG ++E+
Sbjct: 265 GRLPVKWMAPEALFDRVYTHQSDVWSFGVLMWEI 298
>pdb|2C30|A Chain A, Crystal Structure Of The Human P21-Activated Kinase 6
Length = 321
Score = 41.2 bits (95), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 31/128 (24%), Positives = 64/128 (50%), Gaps = 16/128 (12%)
Query: 46 LVFQSVEYGTLRDCIFGAPLPRLKIAS---DIVNSLAYLHFGFPRPIVLRNFKTQNILFN 102
++ + ++ G L D + L +IA+ ++ +LAYLH + ++ R+ K+ +IL
Sbjct: 119 VLMEFLQGGALTDIVSQVRLNEEQIATVCEAVLQALAYLH---AQGVIHRDIKSDSILLT 175
Query: 103 EENVAKWFDF----LLSISIPEGETHITTDRVIGTRGYSAPEYISICVLNEKSNVFSFGA 158
+ K DF +S +P+ + ++GT + APE IS + + +++S G
Sbjct: 176 LDGRVKLSDFGFCAQISKDVPKRKX------LVGTPYWMAPEVISRSLYATEVDIWSLGI 229
Query: 159 FLFELLAG 166
+ E++ G
Sbjct: 230 MVIEMVDG 237
>pdb|3PIX|A Chain A, Crystal Structure Of Btk Kinase Domain Complexed With
2-Isopropyl-7-
(4-Methyl-Piperazin-1-Yl)-4-(5-Methyl-2h-Pyrazol-3-
Ylamino)-2h- Phthalazin-1-One
pdb|3PIY|A Chain A, Crystal Structure Of Btk Kinase Domain Complexed With R406
pdb|3PIZ|A Chain A, Crystal Structure Of Btk Kinase Domain Complexed With
(5-Amino-1-O-
Tolyl-1h-Pyrazol-4-Yl)-[3-(1-Methanesulfonyl-Piperidin-
4-Yl)-Phenyl]- Methanone
pdb|3PJ1|A Chain A, Crystal Structure Of Btk Kinase Domain Complexed With
3-(2,6-Dichloro-
Phenyl)-7-[4-(2-Diethylamino-Ethoxy)-Phenylamino]-1-
Methyl-3,4- Dihydro-1h-Pyrimido[4,5-D]pyrimidin-2-One
pdb|3PJ2|A Chain A, Crystal Structure Of Btk Kinase Domain Complexed With
2-[4-(2-
Diethylamino-Ethoxy)-Phenylamino]-6-(4-Fluoro-Phenoxy)-
8-Methyl-8h- Pyrido[2,3-D]pyrimidin-7-One
pdb|3PJ3|A Chain A, Crystal Structure Of Btk Kinase Domain Complexed With
2-Methyl-5-[(E)-
(3-Phenyl-Acryloyl)amino]-N-(2-Phenyl-3h-Imidazo[4,
5-B]pyridin-6-Yl)- Benzamide
Length = 274
Score = 41.2 bits (95), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 24/98 (24%), Positives = 49/98 (50%), Gaps = 4/98 (4%)
Query: 68 LKIASDIVNSLAYLHFGFPRPIVLRNFKTQNILFNEENVAKWFDFLLSISIPEGETHITT 127
L++ D+ ++ YL + + R+ +N L N++ V K DF LS + + E +
Sbjct: 114 LEMCKDVCEAMEYLE---SKQFLHRDLAARNCLVNDQGVVKVSDFGLSRYVLDDEYTSSV 170
Query: 128 DRVIGTRGYSAPEYISICVLNEKSNVFSFGAFLFELLA 165
R +S PE + + KS++++FG ++E+ +
Sbjct: 171 GSKFPVR-WSPPEVLMYSKFSSKSDIWAFGVLMWEIYS 207
>pdb|3GEN|A Chain A, The 1.6 A Crystal Structure Of Human Bruton's Tyrosine
Kinase Bound To A Pyrrolopyrimidine-Containing Compound
Length = 283
Score = 41.2 bits (95), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 24/98 (24%), Positives = 49/98 (50%), Gaps = 4/98 (4%)
Query: 68 LKIASDIVNSLAYLHFGFPRPIVLRNFKTQNILFNEENVAKWFDFLLSISIPEGETHITT 127
L++ D+ ++ YL + + R+ +N L N++ V K DF LS + + E +
Sbjct: 123 LEMCKDVCEAMEYLE---SKQFLHRDLAARNCLVNDQGVVKVSDFGLSRYVLDDEYTSSV 179
Query: 128 DRVIGTRGYSAPEYISICVLNEKSNVFSFGAFLFELLA 165
R +S PE + + KS++++FG ++E+ +
Sbjct: 180 GSKFPVR-WSPPEVLMYSKFSSKSDIWAFGVLMWEIYS 216
>pdb|3ZH8|A Chain A, A Novel Small Molecule Apkc Inhibitor
pdb|3ZH8|B Chain B, A Novel Small Molecule Apkc Inhibitor
pdb|3ZH8|C Chain C, A Novel Small Molecule Apkc Inhibitor
Length = 349
Score = 41.2 bits (95), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 42/152 (27%), Positives = 68/152 (44%), Gaps = 18/152 (11%)
Query: 25 QMSHNHILKRIGCCLQTPIPILVFQSVEYGTLRDCIFGAPLPRLKI--------ASDIVN 76
Q S++ L + C QT + F +EY D +F R K+ +++I
Sbjct: 61 QASNHPFLVGLHSCFQTESRL--FFVIEYVNGGDLMFHMQRQR-KLPEEHARFYSAEISL 117
Query: 77 SLAYLHFGFPRPIVLRNFKTQNILFNEENVAKWFDF-LLSISIPEGETHITTDRVIGTRG 135
+L YLH R I+ R+ K N+L + E K D+ + + G+T T GT
Sbjct: 118 ALNYLH---ERGIIYRDLKLDNVLLDSEGHIKLTDYGMCKEGLRPGDT---TSXFCGTPN 171
Query: 136 YSAPEYISICVLNEKSNVFSFGAFLFELLAGR 167
Y APE + + ++ G +FE++AGR
Sbjct: 172 YIAPEILRGEDYGFSVDWWALGVLMFEMMAGR 203
>pdb|1OL6|A Chain A, Structure Of Unphosphorylated D274n Mutant Of Aurora-a
Length = 282
Score = 41.2 bits (95), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 27/96 (28%), Positives = 49/96 (51%), Gaps = 7/96 (7%)
Query: 72 SDIVNSLAYLHFGFPRPIVLRNFKTQNILFNEENVAKWFDFLLSISIPEGETHITTDRVI 131
+++ N+L+Y H + ++ R+ K +N+L K +F S+ P + TT +
Sbjct: 117 TELANALSYCH---SKRVIHRDIKPENLLLGSAGELKIANFGWSVHAPS--SRRTT--LC 169
Query: 132 GTRGYSAPEYISICVLNEKSNVFSFGAFLFELLAGR 167
GT Y PE I + +EK +++S G +E L G+
Sbjct: 170 GTLDYLPPEMIEGRMHDEKVDLWSLGVLCYEFLVGK 205
>pdb|3A8W|A Chain A, Crystal Structure Of Pkciota Kinase Domain
pdb|3A8W|B Chain B, Crystal Structure Of Pkciota Kinase Domain
pdb|3A8X|A Chain A, Crystal Structure Of Pkciota Kinase Domain
pdb|3A8X|B Chain B, Crystal Structure Of Pkciota Kinase Domain
Length = 345
Score = 41.2 bits (95), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 42/151 (27%), Positives = 67/151 (44%), Gaps = 16/151 (10%)
Query: 25 QMSHNHILKRIGCCLQTPIPILVFQSVEYGTLRDCIF----GAPLPRLKI---ASDIVNS 77
Q S++ L + C QT + F +EY D +F LP +++I +
Sbjct: 65 QASNHPFLVGLHSCFQTESRL--FFVIEYVNGGDLMFHMQRQRKLPEEHARFYSAEISLA 122
Query: 78 LAYLHFGFPRPIVLRNFKTQNILFNEENVAKWFDF-LLSISIPEGETHITTDRVIGTRGY 136
L YLH R I+ R+ K N+L + E K D+ + + G+T T GT Y
Sbjct: 123 LNYLH---ERGIIYRDLKLDNVLLDSEGHIKLTDYGMCKEGLRPGDT---TSXFCGTPNY 176
Query: 137 SAPEYISICVLNEKSNVFSFGAFLFELLAGR 167
APE + + ++ G +FE++AGR
Sbjct: 177 IAPEILRGEDYGFSVDWWALGVLMFEMMAGR 207
>pdb|3QBN|A Chain A, Structure Of Human Aurora A In Complex With A
Diaminopyrimidine
Length = 281
Score = 41.2 bits (95), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 28/96 (29%), Positives = 48/96 (50%), Gaps = 7/96 (7%)
Query: 72 SDIVNSLAYLHFGFPRPIVLRNFKTQNILFNEENVAKWFDFLLSISIPEGETHITTDRVI 131
+++ N+L+Y H + ++ R+ K +N+L K DF S P + TT +
Sbjct: 116 TELANALSYCH---SKRVIHRDIKPENLLLGSAGELKIADFGWSCHAPS--SRRTT--LS 168
Query: 132 GTRGYSAPEYISICVLNEKSNVFSFGAFLFELLAGR 167
GT Y PE I + +EK +++S G +E L G+
Sbjct: 169 GTLDYLPPEMIEGRMHDEKVDLWSLGVLCYEFLVGK 204
>pdb|3G0E|A Chain A, Kit Kinase Domain In Complex With Sunitinib
Length = 336
Score = 41.2 bits (95), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 23/74 (31%), Positives = 36/74 (48%)
Query: 92 RNFKTQNILFNEENVAKWFDFLLSISIPEGETHITTDRVIGTRGYSAPEYISICVLNEKS 151
R+ +NIL + K DF L+ I ++ + APE I CV +S
Sbjct: 192 RDLAARNILLTHGRITKICDFGLARDIKNDSNYVVKGNARLPVKWMAPESIFNCVYTFES 251
Query: 152 NVFSFGAFLFELLA 165
+V+S+G FL+EL +
Sbjct: 252 DVWSYGIFLWELFS 265
>pdb|1K2P|A Chain A, Crystal Structure Of Bruton's Tyrosine Kinase Domain
pdb|1K2P|B Chain B, Crystal Structure Of Bruton's Tyrosine Kinase Domain
Length = 263
Score = 41.2 bits (95), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 24/98 (24%), Positives = 49/98 (50%), Gaps = 4/98 (4%)
Query: 68 LKIASDIVNSLAYLHFGFPRPIVLRNFKTQNILFNEENVAKWFDFLLSISIPEGETHITT 127
L++ D+ ++ YL + + R+ +N L N++ V K DF LS + + E +
Sbjct: 103 LEMCKDVCEAMEYLE---SKQFLHRDLAARNCLVNDQGVVKVSDFGLSRYVLDDEYTSSV 159
Query: 128 DRVIGTRGYSAPEYISICVLNEKSNVFSFGAFLFELLA 165
R +S PE + + KS++++FG ++E+ +
Sbjct: 160 GSKFPVR-WSPPEVLMYSKFSSKSDIWAFGVLMWEIYS 196
>pdb|3RZF|A Chain A, Crystal Structure Of Inhibitor Of Kappab Kinase Beta
(I4122)
Length = 677
Score = 41.2 bits (95), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 37/134 (27%), Positives = 60/134 (44%), Gaps = 16/134 (11%)
Query: 43 IPILVFQSVEYGTLR-------DCIFGAPLPRLKIASDIVNSLAYLHFGFPRPIVLRNFK 95
+P+L + E G LR +C P + SDI ++L YLH I+ R+ K
Sbjct: 93 LPLLAMEYCEGGDLRKYLNQFENCCGLKEGPIRTLLSDISSALRYLHENR---IIHRDLK 149
Query: 96 TQNILFN---EENVAKWFDFLLSISIPEGETHITTDRVIGTRGYSAPEYISICVLNEKSN 152
+NI+ + + K D + + +GE + T+ +GT Y APE + +
Sbjct: 150 PENIVLQPGPQRLIHKIIDLGYAKELDQGE--LCTE-FVGTLQYLAPELLEQKKYTVTVD 206
Query: 153 VFSFGAFLFELLAG 166
+SFG FE + G
Sbjct: 207 YWSFGTLAFECITG 220
>pdb|3P08|A Chain A, Crystal Structure Of The Human Btk Kinase Domain
pdb|3P08|B Chain B, Crystal Structure Of The Human Btk Kinase Domain
Length = 267
Score = 41.2 bits (95), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 24/98 (24%), Positives = 49/98 (50%), Gaps = 4/98 (4%)
Query: 68 LKIASDIVNSLAYLHFGFPRPIVLRNFKTQNILFNEENVAKWFDFLLSISIPEGETHITT 127
L++ D+ ++ YL + + R+ +N L N++ V K DF LS + + E +
Sbjct: 107 LEMCKDVCEAMEYLE---SKQFLHRDLAARNCLVNDQGVVKVSDFGLSRYVLDDEYTSSV 163
Query: 128 DRVIGTRGYSAPEYISICVLNEKSNVFSFGAFLFELLA 165
R +S PE + + KS++++FG ++E+ +
Sbjct: 164 GSKFPVR-WSPPEVLMYSKFSSKSDIWAFGVLMWEIYS 200
>pdb|3QA8|A Chain A, Crystal Structure Of Inhibitor Of Kappa B Kinase Beta
pdb|3QA8|B Chain B, Crystal Structure Of Inhibitor Of Kappa B Kinase Beta
pdb|3QA8|C Chain C, Crystal Structure Of Inhibitor Of Kappa B Kinase Beta
pdb|3QA8|D Chain D, Crystal Structure Of Inhibitor Of Kappa B Kinase Beta
pdb|3QA8|E Chain E, Crystal Structure Of Inhibitor Of Kappa B Kinase Beta
pdb|3QA8|F Chain F, Crystal Structure Of Inhibitor Of Kappa B Kinase Beta
pdb|3QA8|G Chain G, Crystal Structure Of Inhibitor Of Kappa B Kinase Beta
pdb|3QA8|H Chain H, Crystal Structure Of Inhibitor Of Kappa B Kinase Beta
Length = 676
Score = 41.2 bits (95), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 37/134 (27%), Positives = 60/134 (44%), Gaps = 16/134 (11%)
Query: 43 IPILVFQSVEYGTLR-------DCIFGAPLPRLKIASDIVNSLAYLHFGFPRPIVLRNFK 95
+P+L + E G LR +C P + SDI ++L YLH I+ R+ K
Sbjct: 92 LPLLAMEYCEGGDLRKYLNQFENCCGLKEGPIRTLLSDISSALRYLHENR---IIHRDLK 148
Query: 96 TQNILFN---EENVAKWFDFLLSISIPEGETHITTDRVIGTRGYSAPEYISICVLNEKSN 152
+NI+ + + K D + + +GE + T+ +GT Y APE + +
Sbjct: 149 PENIVLQPGPQRLIHKIIDLGYAKELDQGE--LCTE-FVGTLQYLAPELLEQKKYTVTVD 205
Query: 153 VFSFGAFLFELLAG 166
+SFG FE + G
Sbjct: 206 YWSFGTLAFECITG 219
>pdb|3OCS|A Chain A, Crystal Structure Of Bruton's Tyrosine Kinase In Complex
With Inhibitor Cgi1746
Length = 271
Score = 41.2 bits (95), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 24/98 (24%), Positives = 49/98 (50%), Gaps = 4/98 (4%)
Query: 68 LKIASDIVNSLAYLHFGFPRPIVLRNFKTQNILFNEENVAKWFDFLLSISIPEGETHITT 127
L++ D+ ++ YL + + R+ +N L N++ V K DF LS + + E +
Sbjct: 108 LEMCKDVCEAMEYLE---SKQFLHRDLAARNCLVNDQGVVKVSDFGLSRYVLDDEYTSSV 164
Query: 128 DRVIGTRGYSAPEYISICVLNEKSNVFSFGAFLFELLA 165
R +S PE + + KS++++FG ++E+ +
Sbjct: 165 GSKFPVR-WSPPEVLMYSKFSSKSDIWAFGVLMWEIYS 201
>pdb|1T45|A Chain A, Structural Basis For The Autoinhibition And Sti-571
Inhibition Of C- Kit Tyrosine Kinase
Length = 331
Score = 41.2 bits (95), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 23/74 (31%), Positives = 36/74 (48%)
Query: 92 RNFKTQNILFNEENVAKWFDFLLSISIPEGETHITTDRVIGTRGYSAPEYISICVLNEKS 151
R+ +NIL + K DF L+ I ++ + APE I CV +S
Sbjct: 187 RDLAARNILLTHGRITKICDFGLARDIKNDSNYVVKGNARLPVKWMAPESIFNCVYTFES 246
Query: 152 NVFSFGAFLFELLA 165
+V+S+G FL+EL +
Sbjct: 247 DVWSYGIFLWELFS 260
>pdb|1T46|A Chain A, Structural Basis For The Autoinhibition And Sti-571
Inhibition Of C-kit Tyrosine Kinase
Length = 313
Score = 41.2 bits (95), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 23/74 (31%), Positives = 36/74 (48%)
Query: 92 RNFKTQNILFNEENVAKWFDFLLSISIPEGETHITTDRVIGTRGYSAPEYISICVLNEKS 151
R+ +NIL + K DF L+ I ++ + APE I CV +S
Sbjct: 169 RDLAARNILLTHGRITKICDFGLARDIKNDSNYVVKGNARLPVKWMAPESIFNCVYTFES 228
Query: 152 NVFSFGAFLFELLA 165
+V+S+G FL+EL +
Sbjct: 229 DVWSYGIFLWELFS 242
>pdb|2XNE|A Chain A, Structure Of Aurora-A Bound To An Imidazopyrazine
Inhibitor
Length = 272
Score = 41.2 bits (95), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 27/96 (28%), Positives = 49/96 (51%), Gaps = 7/96 (7%)
Query: 72 SDIVNSLAYLHFGFPRPIVLRNFKTQNILFNEENVAKWFDFLLSISIPEGETHITTDRVI 131
+++ N+L+Y H + ++ R+ K +N+L K +F S+ P + TT +
Sbjct: 118 TELANALSYCH---SKRVIHRDIKPENLLLGSAGELKIANFGWSVHAPS--SRRTT--LC 170
Query: 132 GTRGYSAPEYISICVLNEKSNVFSFGAFLFELLAGR 167
GT Y PE I + +EK +++S G +E L G+
Sbjct: 171 GTLDYLPPEMIEGRMHDEKVDLWSLGVLCYEFLVGK 206
>pdb|2YZA|A Chain A, Crystal Structure Of Kinase Domain Of Human
5'-Amp-Activated Protein Kinase Alpha-2 Subunit Mutant
(T172d)
pdb|3AQV|A Chain A, Human Amp-Activated Protein Kinase Alpha 2 Subunit Kinase
Domain (T172d) Complexed With Compound C
Length = 276
Score = 41.2 bits (95), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 50/186 (26%), Positives = 80/186 (43%), Gaps = 18/186 (9%)
Query: 14 GSCINNITYAAQMSHNHILKRIGCCLQTPIPI-LVFQSVEYGTLRD--CIFG--APLPRL 68
G I H HI+K + + TP +V + V G L D C G +
Sbjct: 56 GKIKREIQNLKLFRHPHIIK-LYQVISTPTDFFMVMEYVSGGELFDYICKHGRVEEMEAR 114
Query: 69 KIASDIVNSLAYLHFGFPRPIVLRNFKTQNILFNEENVAKWFDFLLSISIPEGETHITTD 128
++ I++++ Y H +V R+ K +N+L + AK DF LS + +GE +
Sbjct: 115 RLFQQILSAVDYCHRHM---VVHRDLKPENVLLDAHMNAKIADFGLSNMMSDGEFLRDS- 170
Query: 129 RVIGTRGYSAPEYIS-ICVLNEKSNVFSFGAFLFELLAGRI-----HIWDLLKDTHDHGC 182
G+ Y+APE IS + +++S G L+ LL G + H+ L K
Sbjct: 171 --CGSPNYAAPEVISGRLYAGPEVDIWSCGVILYALLCGTLPFDDEHVPTLFKKIRGGVF 228
Query: 183 FFNEYL 188
+ EYL
Sbjct: 229 YIPEYL 234
>pdb|1PKG|A Chain A, Structure Of A C-kit Kinase Product Complex
pdb|1PKG|B Chain B, Structure Of A C-kit Kinase Product Complex
Length = 329
Score = 41.2 bits (95), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 23/74 (31%), Positives = 36/74 (48%)
Query: 92 RNFKTQNILFNEENVAKWFDFLLSISIPEGETHITTDRVIGTRGYSAPEYISICVLNEKS 151
R+ +NIL + K DF L+ I ++ + APE I CV +S
Sbjct: 185 RDLAARNILLTHGRITKICDFGLARDIKNDSNYVVKGNARLPVKWMAPESIFNCVYTFES 244
Query: 152 NVFSFGAFLFELLA 165
+V+S+G FL+EL +
Sbjct: 245 DVWSYGIFLWELFS 258
>pdb|4DC2|A Chain A, Structure Of Pkc In Complex With A Substrate Peptide From
Par-3
Length = 396
Score = 41.2 bits (95), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 42/151 (27%), Positives = 67/151 (44%), Gaps = 16/151 (10%)
Query: 25 QMSHNHILKRIGCCLQTPIPILVFQSVEYGTLRDCIF----GAPLPRLKI---ASDIVNS 77
Q S++ L + C QT + F +EY D +F LP +++I +
Sbjct: 108 QASNHPFLVGLHSCFQTESRL--FFVIEYVNGGDLMFHMQRQRKLPEEHARFYSAEISLA 165
Query: 78 LAYLHFGFPRPIVLRNFKTQNILFNEENVAKWFDF-LLSISIPEGETHITTDRVIGTRGY 136
L YLH R I+ R+ K N+L + E K D+ + + G+T T GT Y
Sbjct: 166 LNYLH---ERGIIYRDLKLDNVLLDSEGHIKLTDYGMCKEGLRPGDT---TSTFCGTPNY 219
Query: 137 SAPEYISICVLNEKSNVFSFGAFLFELLAGR 167
APE + + ++ G +FE++AGR
Sbjct: 220 IAPEILRGEDYGFSVDWWALGVLMFEMMAGR 250
>pdb|1ZRZ|A Chain A, Crystal Structure Of The Catalytic Domain Of Atypical
Protein Kinase C-Iota
Length = 364
Score = 41.2 bits (95), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 42/152 (27%), Positives = 68/152 (44%), Gaps = 18/152 (11%)
Query: 25 QMSHNHILKRIGCCLQTPIPILVFQSVEYGTLRDCIFGAPLPRLKI--------ASDIVN 76
Q S++ L + C QT + F +EY D +F R K+ +++I
Sbjct: 76 QASNHPFLVGLHSCFQTESRL--FFVIEYVNGGDLMFHMQRQR-KLPEEHARFYSAEISL 132
Query: 77 SLAYLHFGFPRPIVLRNFKTQNILFNEENVAKWFDF-LLSISIPEGETHITTDRVIGTRG 135
+L YLH R I+ R+ K N+L + E K D+ + + G+T T GT
Sbjct: 133 ALNYLH---ERGIIYRDLKLDNVLLDSEGHIKLTDYGMCKEGLRPGDT---TSXFCGTPN 186
Query: 136 YSAPEYISICVLNEKSNVFSFGAFLFELLAGR 167
Y APE + + ++ G +FE++AGR
Sbjct: 187 YIAPEILRGEDYGFSVDWWALGVLMFEMMAGR 218
>pdb|3E92|A Chain A, Crystal Structure Of P38 Kinase In Complex With A Biaryl
Amide Inhibitor
pdb|3E93|A Chain A, Crystal Structure Of P38 Kinase In Complex With A Biaryl
Amide Inhibitor
Length = 371
Score = 40.8 bits (94), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 31/98 (31%), Positives = 45/98 (45%), Gaps = 15/98 (15%)
Query: 74 IVNSLAYLHFGFPRPIVLRNFKTQNILFNEENVAKWFDFLLSISIPEGETHITTDRVIG- 132
I+ L Y+H I+ R+ K N+ NE+ K DF G T D + G
Sbjct: 145 ILRGLKYIHSA---DIIHRDLKPSNLAVNEDXELKILDF--------GLARHTDDEMTGY 193
Query: 133 --TRGYSAPE-YISICVLNEKSNVFSFGAFLFELLAGR 167
TR Y APE ++ N+ +++S G + ELL GR
Sbjct: 194 VATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGR 231
>pdb|2BAQ|A Chain A, P38alpha Bound To Ro3201195
Length = 365
Score = 40.8 bits (94), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 31/98 (31%), Positives = 45/98 (45%), Gaps = 15/98 (15%)
Query: 74 IVNSLAYLHFGFPRPIVLRNFKTQNILFNEENVAKWFDFLLSISIPEGETHITTDRVIG- 132
I+ L Y+H I+ R+ K N+ NE+ K DF G T D + G
Sbjct: 139 ILRGLKYIHSA---DIIHRDLKPSNLAVNEDXELKILDF--------GLARHTDDEMTGY 187
Query: 133 --TRGYSAPE-YISICVLNEKSNVFSFGAFLFELLAGR 167
TR Y APE ++ N+ +++S G + ELL GR
Sbjct: 188 VATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGR 225
>pdb|3D83|A Chain A, Crystal Structure Of P38 Kinase In Complex With A Biphenyl
Amide Inhibitor
pdb|3IPH|A Chain A, Crystal Structure Of P38 In Complex With A Biphenylamide
Inhibitor
Length = 360
Score = 40.8 bits (94), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 31/98 (31%), Positives = 45/98 (45%), Gaps = 15/98 (15%)
Query: 74 IVNSLAYLHFGFPRPIVLRNFKTQNILFNEENVAKWFDFLLSISIPEGETHITTDRVIG- 132
I+ L Y+H I+ R+ K N+ NE+ K DF G T D + G
Sbjct: 134 ILRGLKYIHSA---DIIHRDLKPSNLAVNEDXELKILDF--------GLARHTDDEMTGY 182
Query: 133 --TRGYSAPE-YISICVLNEKSNVFSFGAFLFELLAGR 167
TR Y APE ++ N+ +++S G + ELL GR
Sbjct: 183 VATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGR 220
>pdb|2BAL|A Chain A, P38alpha Map Kinase Bound To Pyrazoloamine
pdb|4AA5|A Chain A, P38alpha Map Kinase Bound To Cmpd 33
Length = 365
Score = 40.8 bits (94), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 31/98 (31%), Positives = 45/98 (45%), Gaps = 15/98 (15%)
Query: 74 IVNSLAYLHFGFPRPIVLRNFKTQNILFNEENVAKWFDFLLSISIPEGETHITTDRVIG- 132
I+ L Y+H I+ R+ K N+ NE+ K DF G T D + G
Sbjct: 139 ILRGLKYIHSA---DIIHRDLKPSNLAVNEDXELKILDF--------GLARHTDDEMTGY 187
Query: 133 --TRGYSAPE-YISICVLNEKSNVFSFGAFLFELLAGR 167
TR Y APE ++ N+ +++S G + ELL GR
Sbjct: 188 VATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGR 225
>pdb|2F57|A Chain A, Crystal Structure Of The Human P21-activated Kinase 5
pdb|2F57|B Chain B, Crystal Structure Of The Human P21-activated Kinase 5
Length = 317
Score = 40.8 bits (94), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 31/128 (24%), Positives = 63/128 (49%), Gaps = 16/128 (12%)
Query: 46 LVFQSVEYGTLRDCIFGAPLPRLKIAS---DIVNSLAYLHFGFPRPIVLRNFKTQNILFN 102
+V + +E G L D + + +IA+ ++ +L+YLH + ++ R+ K+ +IL
Sbjct: 119 VVMEFLEGGALTDIVTHTRMNEEQIATVCLSVLRALSYLH---NQGVIHRDIKSDSILLT 175
Query: 103 EENVAKWFDF----LLSISIPEGETHITTDRVIGTRGYSAPEYISICVLNEKSNVFSFGA 158
+ K DF +S +P+ + ++GT + APE IS + +++S G
Sbjct: 176 SDGRIKLSDFGFCAQVSKEVPKRKX------LVGTPYWMAPEVISRLPYGTEVDIWSLGI 229
Query: 159 FLFELLAG 166
+ E++ G
Sbjct: 230 MVIEMIDG 237
>pdb|2PZR|A Chain A, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic K641r Mutation Responsible For
Pfeiffer Syndrome
pdb|2PZR|B Chain B, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic K641r Mutation Responsible For
Pfeiffer Syndrome
Length = 324
Score = 40.8 bits (94), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 34/154 (22%), Positives = 63/154 (40%), Gaps = 17/154 (11%)
Query: 27 SHNHILKRIGCCLQTPIPILVFQSVEYGTLRDCIFGAPLPRLKIASDI---------VNS 77
H +I+ +G C Q ++ + G LR+ + P ++ + DI
Sbjct: 99 KHKNIINLLGACTQDGPLYVIVEYASKGNLREYLRARRPPGMEYSYDINRVPEEQMTFKD 158
Query: 78 LAYLHFGFPRPI--------VLRNFKTQNILFNEENVAKWFDFLLSISIPEGETHITTDR 129
L + R + + R+ +N+L E NV + DF L+ I + + T
Sbjct: 159 LVSCTYQLARGMEYLASQKCIHRDLAARNVLVTENNVMRIADFGLARDINNIDYYKKTTN 218
Query: 130 VIGTRGYSAPEYISICVLNEKSNVFSFGAFLFEL 163
+ APE + V +S+V+SFG ++E+
Sbjct: 219 GRLPVKWMAPEALFDRVYTHQSDVWSFGVLMWEI 252
>pdb|2QOO|A Chain A, Human Epha3 Kinase And Juxtamembrane Region,
Y596f:y602f:y742f Triple Mutant
Length = 373
Score = 40.8 bits (94), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 56/228 (24%), Positives = 94/228 (41%), Gaps = 47/228 (20%)
Query: 24 AQMSHNHILKRIGCCLQTPIPILVFQSVEYGTL------RDCIFGAPLPRLKIASDIVNS 77
Q H +I++ G ++ ++V + +E G+L D F + + + I +
Sbjct: 101 GQFDHPNIIRLEGVVTKSKPVMIVTEYMENGSLDSFLRKHDAQFTV-IQLVGMLRGIASG 159
Query: 78 LAYLH-FGFPRPIVLRNFKTQNILFNEENVAKWFDFLLSISIPEGETHITTDRVIGTRG- 135
+ YL GF V R+ +NIL N V K DF LS + + T TRG
Sbjct: 160 MKYLSDMGF----VHRDLAARNILINSNLVCKVSDFGLSRVLEDDPEAAYT-----TRGG 210
Query: 136 -----YSAPEYISICVLNEKSNVFSFGAFLFELLA-GRIHIWDLLKDTHDHGCFFNEYLK 189
+++PE I+ S+V+S+G L+E+++ G W++ + +K
Sbjct: 211 KIPIRWTSPEAIAYRKFTSASDVWSYGIVLWEVMSYGERPYWEMSN---------QDVIK 261
Query: 190 NYLEDKRFTGIPAPIIVQDIPCIEKEQQLHASAQLTLECVNNSPEDRP 237
E R +P P+ D P A QL L+C +RP
Sbjct: 262 AVDEGYR---LPPPM---DCPA--------ALYQLMLDCWQKDRNNRP 295
>pdb|3GCP|A Chain A, Human P38 Map Kinase In Complex With Sb203580
pdb|3GCQ|A Chain A, Human P38 Map Kinase In Complex With Rl45
pdb|3GCS|A Chain A, Human P38 Map Kinase In Complex With Sorafenib
pdb|3GCV|A Chain A, Human P38 Map Kinase In Complex With Rl62
pdb|3HV3|A Chain A, Human P38 Map Kinase In Complex With Rl49
pdb|3IW5|A Chain A, Human P38 Map Kinase In Complex With An Indole Derivative
pdb|3IW6|A Chain A, Human P38 Map Kinase In Complex With A Benzylpiperazin-
Pyrrol
pdb|3IW7|A Chain A, Human P38 Map Kinase In Complex With An Imidazo-Pyridine
pdb|3IW8|A Chain A, Structure Of Inactive Human P38 Map Kinase In Complex With
A Thiazole-Urea
pdb|3HUB|A Chain A, Human P38 Map Kinase In Complex With Scios-469
pdb|3L8S|A Chain A, Human P38 Map Kinase In Complex With Cp-547632
pdb|3LFB|A Chain A, Human P38 Map Kinase In Complex With Rl98
pdb|3LFC|A Chain A, Human P38 Map Kinase In Complex With Rl99
pdb|3LFD|A Chain A, Human P38 Map Kinase In Complex With Rl113
pdb|3LFE|A Chain A, Human P38 Map Kinase In Complex With Rl116
pdb|3LFF|A Chain A, Human P38 Map Kinase In Complex With Rl166
pdb|3PG3|A Chain A, Human P38 Map Kinase In Complex With Rl182
Length = 360
Score = 40.8 bits (94), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 31/98 (31%), Positives = 46/98 (46%), Gaps = 15/98 (15%)
Query: 74 IVNSLAYLHFGFPRPIVLRNFKTQNILFNEENVAKWFDFLLSISIPEGETHITTDRVIG- 132
I+ L Y+H I+ R+ K N+ NE++ K DF G T D + G
Sbjct: 134 ILRGLKYIHSA---DIIHRDLKPSNLAVNEDSELKILDF--------GLCRHTDDEMTGY 182
Query: 133 --TRGYSAPE-YISICVLNEKSNVFSFGAFLFELLAGR 167
TR Y APE ++ N+ +++S G + ELL GR
Sbjct: 183 VATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGR 220
>pdb|2VWU|A Chain A, Ephb4 Kinase Domain Inhibitor Complex
pdb|2VWV|A Chain A, Ephb4 Kinase Domain Inhibitor Complex
pdb|2VWW|A Chain A, Ephb4 Kinase Domain Inhibitor Complex
pdb|2VWX|A Chain A, Ephb4 Kinase Domain Inhibitor Complex
pdb|2VWY|A Chain A, Ephb4 Kinase Domain Inhibitor Complex
pdb|2VWZ|A Chain A, Ephb4 Kinase Domain Inhibitor Complex
pdb|2VX0|A Chain A, Ephb4 Kinase Domain Inhibitor Complex
pdb|2VX1|A Chain A, Ephb4 Kinase Domain Inhibitor Complex
pdb|2X9F|A Chain A, Ephb4 Kinase Domain Inhibitor Complex
pdb|2XVD|A Chain A, Ephb4 Kinase Domain Inhibitor Complex
pdb|4BB4|A Chain A, Ephb4 Kinase Domain Inhibitor Complex
Length = 302
Score = 40.8 bits (94), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 26/88 (29%), Positives = 44/88 (50%), Gaps = 4/88 (4%)
Query: 90 VLRNFKTQNILFNEENVAKWFDFLLSISIPEGETHITTDRVIGTR---GYSAPEYISICV 146
V R+ +NIL N V K DF LS + E + T +G + ++APE I+
Sbjct: 140 VHRDLAARNILVNSNLVCKVSDFGLSRFLEENSSDPTETSSLGGKIPIRWTAPEAIAFRK 199
Query: 147 LNEKSNVFSFGAFLFELLA-GRIHIWDL 173
S+ +S+G ++E+++ G WD+
Sbjct: 200 FTSASDAWSYGIVMWEVMSFGERPYWDM 227
>pdb|2Q0B|A Chain A, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic E565a Mutation Responsible For
Pfeiffer Syndrome
pdb|2Q0B|B Chain B, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic E565a Mutation Responsible For
Pfeiffer Syndrome
Length = 324
Score = 40.8 bits (94), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 35/154 (22%), Positives = 62/154 (40%), Gaps = 17/154 (11%)
Query: 27 SHNHILKRIGCCLQTPIPILVFQSVEYGTLRDCIFGAPLPRLKIASDI---------VNS 77
H +I+ +G C Q ++ G LR+ + P ++ + DI
Sbjct: 99 KHKNIINLLGACTQDGPLYVIVAYASKGNLREYLRARRPPGMEYSYDINRVPEEQMTFKD 158
Query: 78 LAYLHFGFPRPI--------VLRNFKTQNILFNEENVAKWFDFLLSISIPEGETHITTDR 129
L + R + + R+ +N+L E NV K DF L+ I + + T
Sbjct: 159 LVSCTYQLARGMEYLASQKCIHRDLAARNVLVTENNVMKIADFGLARDINNIDYYKKTTN 218
Query: 130 VIGTRGYSAPEYISICVLNEKSNVFSFGAFLFEL 163
+ APE + V +S+V+SFG ++E+
Sbjct: 219 GRLPVKWMAPEALFDRVYTHQSDVWSFGVLMWEI 252
>pdb|3G0F|A Chain A, Kit Kinase Domain Mutant D816h In Complex With Sunitinib
pdb|3G0F|B Chain B, Kit Kinase Domain Mutant D816h In Complex With Sunitinib
Length = 336
Score = 40.8 bits (94), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 23/74 (31%), Positives = 36/74 (48%)
Query: 92 RNFKTQNILFNEENVAKWFDFLLSISIPEGETHITTDRVIGTRGYSAPEYISICVLNEKS 151
R+ +NIL + K DF L+ I ++ + APE I CV +S
Sbjct: 192 RDLAARNILLTHGRITKICDFGLARHIKNDSNYVVKGNARLPVKWMAPESIFNCVYTFES 251
Query: 152 NVFSFGAFLFELLA 165
+V+S+G FL+EL +
Sbjct: 252 DVWSYGIFLWELFS 265
>pdb|2QO7|A Chain A, Human Epha3 Kinase And Juxtamembrane Region,
Dephosphorylated, Amp-Pnp Bound
pdb|2QOQ|A Chain A, Human Epha3 Kinase And Juxtamembrane Region, Base, Amp-Pnp
Bound Structure
Length = 373
Score = 40.4 bits (93), Expect = 8e-04, Method: Compositional matrix adjust.
Identities = 55/228 (24%), Positives = 94/228 (41%), Gaps = 47/228 (20%)
Query: 24 AQMSHNHILKRIGCCLQTPIPILVFQSVEYGTL------RDCIFGAPLPRLKIASDIVNS 77
Q H +I++ G ++ ++V + +E G+L D F + + + I +
Sbjct: 101 GQFDHPNIIRLEGVVTKSKPVMIVTEXMENGSLDSFLRKHDAQFTV-IQLVGMLRGIASG 159
Query: 78 LAYLH-FGFPRPIVLRNFKTQNILFNEENVAKWFDFLLSISIPEGETHITTDRVIGTRG- 135
+ YL G+ V R+ +NIL N V K DF LS + + T TRG
Sbjct: 160 MKYLSDMGY----VHRDLAARNILINSNLVCKVSDFGLSRVLEDDPEAAYT-----TRGG 210
Query: 136 -----YSAPEYISICVLNEKSNVFSFGAFLFELLA-GRIHIWDLLKDTHDHGCFFNEYLK 189
+++PE I+ S+V+S+G L+E+++ G W++ + +K
Sbjct: 211 KIPIRWTSPEAIAYRKFTSASDVWSYGIVLWEVMSYGERPYWEMSN---------QDVIK 261
Query: 190 NYLEDKRFTGIPAPIIVQDIPCIEKEQQLHASAQLTLECVNNSPEDRP 237
E R +P P+ D P A QL L+C +RP
Sbjct: 262 AVDEGYR---LPPPM---DCPA--------ALYQLMLDCWQKDRNNRP 295
>pdb|3GI3|A Chain A, Crystal Structure Of A N-Phenyl-N'-Naphthylurea Analog In
Complex With P38 Map Kinase
Length = 360
Score = 40.4 bits (93), Expect = 8e-04, Method: Compositional matrix adjust.
Identities = 29/95 (30%), Positives = 45/95 (47%), Gaps = 9/95 (9%)
Query: 74 IVNSLAYLHFGFPRPIVLRNFKTQNILFNEENVAKWFDFLLSISIPEGETHITTDRVIGT 133
I+ L Y+H I+ R+ K N+ NE+ K DF L+ + T + T
Sbjct: 134 ILRGLKYIHSA---DIIHRDLKPSNLAVNEDCELKILDFYLARHTDDEMTG-----YVAT 185
Query: 134 RGYSAPE-YISICVLNEKSNVFSFGAFLFELLAGR 167
R Y APE ++ N+ +++S G + ELL GR
Sbjct: 186 RWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGR 220
>pdb|2PY3|A Chain A, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic E565g Mutation Responsible For
Pfeiffer Syndrome
pdb|2PY3|B Chain B, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic E565g Mutation Responsible For
Pfeiffer Syndrome
Length = 324
Score = 40.4 bits (93), Expect = 8e-04, Method: Compositional matrix adjust.
Identities = 35/154 (22%), Positives = 62/154 (40%), Gaps = 17/154 (11%)
Query: 27 SHNHILKRIGCCLQTPIPILVFQSVEYGTLRDCIFGAPLPRLKIASDI---------VNS 77
H +I+ +G C Q ++ G LR+ + P ++ + DI
Sbjct: 99 KHKNIINLLGACTQDGPLYVIVGYASKGNLREYLRARRPPGMEYSYDINRVPEEQMTFKD 158
Query: 78 LAYLHFGFPRPI--------VLRNFKTQNILFNEENVAKWFDFLLSISIPEGETHITTDR 129
L + R + + R+ +N+L E NV K DF L+ I + + T
Sbjct: 159 LVSCTYQLARGMEYLASQKCIHRDLAARNVLVTENNVMKIADFGLARDINNIDYYKKTTN 218
Query: 130 VIGTRGYSAPEYISICVLNEKSNVFSFGAFLFEL 163
+ APE + V +S+V+SFG ++E+
Sbjct: 219 GRLPVKWMAPEALFDRVYTHQSDVWSFGVLMWEI 252
>pdb|3DKG|A Chain A, Sgx Clone 5698a109kfg1h1
Length = 317
Score = 40.4 bits (93), Expect = 9e-04, Method: Compositional matrix adjust.
Identities = 38/145 (26%), Positives = 69/145 (47%), Gaps = 7/145 (4%)
Query: 27 SHNHILKRIGCCLQTP-IPILVFQSVEYGTLRDCIFGAPL-PRLKIASDIVNSLAY-LHF 83
SH ++L +G CL++ P++V +++G LR+ I P +K +A + F
Sbjct: 90 SHPNVLSLLGICLRSEGSPLVVLPYMKHGDLRNFIRNETHNPTVKDLIGFGLQVAKGMKF 149
Query: 84 GFPRPIVLRNFKTQNILFNEENVAKWFDFLLSISIPEGE---THITTDRVIGTRGYSAPE 140
+ V R+ +N + +E+ K DF L+ + + E H T + + + A E
Sbjct: 150 LASKKFVHRDLAARNCMLDEKFTVKVADFGLARDMLDKEFDSVHNKTGAKLPVK-WMALE 208
Query: 141 YISICVLNEKSNVFSFGAFLFELLA 165
+ KS+V+SFG L+EL+
Sbjct: 209 SLQTQKFTTKSDVWSFGVLLWELMT 233
>pdb|2FSL|X Chain X, Mitogen Activated Protein Kinase P38alpha (D176a+f327s)
Activating Mutant Form-A
pdb|2FSM|X Chain X, Mitogen Activated Protein Kinase P38alpha (D176a+f327s)
Activating Mutant Form-B
Length = 367
Score = 40.4 bits (93), Expect = 9e-04, Method: Compositional matrix adjust.
Identities = 31/98 (31%), Positives = 45/98 (45%), Gaps = 15/98 (15%)
Query: 74 IVNSLAYLHFGFPRPIVLRNFKTQNILFNEENVAKWFDFLLSISIPEGETHITTDRVIG- 132
I+ L Y+H I+ R+ K N+ NE+ K DF G T D + G
Sbjct: 141 ILRGLKYIHSA---DIIHRDLKPSNLAVNEDCELKILDF--------GLARHTADEMTGY 189
Query: 133 --TRGYSAPE-YISICVLNEKSNVFSFGAFLFELLAGR 167
TR Y APE ++ N+ +++S G + ELL GR
Sbjct: 190 VATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGR 227
>pdb|2FST|X Chain X, Mitogen Activated Protein Kinase P38alpha (d176a+f327l)
Activating Mutant
Length = 367
Score = 40.4 bits (93), Expect = 9e-04, Method: Compositional matrix adjust.
Identities = 31/98 (31%), Positives = 45/98 (45%), Gaps = 15/98 (15%)
Query: 74 IVNSLAYLHFGFPRPIVLRNFKTQNILFNEENVAKWFDFLLSISIPEGETHITTDRVIG- 132
I+ L Y+H I+ R+ K N+ NE+ K DF G T D + G
Sbjct: 141 ILRGLKYIHSA---DIIHRDLKPSNLAVNEDCELKILDF--------GLARHTADEMTGY 189
Query: 133 --TRGYSAPE-YISICVLNEKSNVFSFGAFLFELLAGR 167
TR Y APE ++ N+ +++S G + ELL GR
Sbjct: 190 VATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGR 227
>pdb|4E5A|X Chain X, The W197a Mutant Of P38a Map Kinase
Length = 360
Score = 40.4 bits (93), Expect = 9e-04, Method: Compositional matrix adjust.
Identities = 31/98 (31%), Positives = 45/98 (45%), Gaps = 15/98 (15%)
Query: 74 IVNSLAYLHFGFPRPIVLRNFKTQNILFNEENVAKWFDFLLSISIPEGETHITTDRVIG- 132
I+ L Y+H I+ R+ K N+ NE+ K DF G T D + G
Sbjct: 134 ILRGLKYIHSA---DIIHRDLKPSNLAVNEDCELKILDF--------GLARHTDDEMTGY 182
Query: 133 --TRGYSAPE-YISICVLNEKSNVFSFGAFLFELLAGR 167
TR Y APE ++ N+ +++S G + ELL GR
Sbjct: 183 VATRWYRAPEIMLNAMHYNQTVDIWSVGCIMAELLTGR 220
>pdb|1R0P|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of The
Hepatocyte Growth Factor Receptor C-Met In Complex With
The Microbial Alkaloid K-252a
pdb|1R1W|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of The
Hepatocyte Growth Factor Receptor C-Met
Length = 312
Score = 40.4 bits (93), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 38/145 (26%), Positives = 69/145 (47%), Gaps = 7/145 (4%)
Query: 27 SHNHILKRIGCCLQTP-IPILVFQSVEYGTLRDCIFGAPL-PRLKIASDIVNSLAY-LHF 83
SH ++L +G CL++ P++V +++G LR+ I P +K +A + F
Sbjct: 87 SHPNVLSLLGICLRSEGSPLVVLPYMKHGDLRNFIRNETHNPTVKDLIGFGLQVAKGMKF 146
Query: 84 GFPRPIVLRNFKTQNILFNEENVAKWFDFLLSISIPEGE---THITTDRVIGTRGYSAPE 140
+ V R+ +N + +E+ K DF L+ + + E H T + + + A E
Sbjct: 147 LASKKFVHRDLAARNCMLDEKFTVKVADFGLARDMYDKEFDSVHNKTGAKLPVK-WMALE 205
Query: 141 YISICVLNEKSNVFSFGAFLFELLA 165
+ KS+V+SFG L+EL+
Sbjct: 206 SLQTQKFTTKSDVWSFGVLLWELMT 230
>pdb|3QTI|A Chain A, C-Met Kinase In Complex With Nvp-Bvu972
pdb|3QTI|B Chain B, C-Met Kinase In Complex With Nvp-Bvu972
Length = 314
Score = 40.4 bits (93), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 38/145 (26%), Positives = 69/145 (47%), Gaps = 7/145 (4%)
Query: 27 SHNHILKRIGCCLQTP-IPILVFQSVEYGTLRDCIFGAPL-PRLKIASDIVNSLAY-LHF 83
SH ++L +G CL++ P++V +++G LR+ I P +K +A + F
Sbjct: 89 SHPNVLSLLGICLRSEGSPLVVLPYMKHGDLRNFIRNETHNPTVKDLIGFGLQVAKGMKF 148
Query: 84 GFPRPIVLRNFKTQNILFNEENVAKWFDFLLSISIPEGE---THITTDRVIGTRGYSAPE 140
+ V R+ +N + +E+ K DF L+ + + E H T + + + A E
Sbjct: 149 LASKKFVHRDLAARNCMLDEKFTVKVADFGLARDMYDKEFDSVHNKTGAKLPVK-WMALE 207
Query: 141 YISICVLNEKSNVFSFGAFLFELLA 165
+ KS+V+SFG L+EL+
Sbjct: 208 SLQTQKFTTKSDVWSFGVLLWELMT 232
>pdb|2Y94|A Chain A, Structure Of An Active Form Of Mammalian Ampk
Length = 476
Score = 40.4 bits (93), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 51/186 (27%), Positives = 81/186 (43%), Gaps = 18/186 (9%)
Query: 14 GSCINNITYAAQMSHNHILKRIGCCLQTPIPI-LVFQSVEYGTLRD--CIFGAPLPR--L 68
G I H HI+K + + TP I +V + V G L D C G +
Sbjct: 61 GKIRREIQNLKLFRHPHIIK-LYQVISTPSDIFMVMEYVSGGELFDYICKNGRLDEKESR 119
Query: 69 KIASDIVNSLAYLHFGFPRPIVLRNFKTQNILFNEENVAKWFDFLLSISIPEGETHITTD 128
++ I++ + Y H +V R+ K +N+L + AK DF LS + +GE +
Sbjct: 120 RLFQQILSGVDYCHRHM---VVHRDLKPENVLLDAHMNAKIADFGLSNMMSDGEFLRXS- 175
Query: 129 RVIGTRGYSAPEYIS-ICVLNEKSNVFSFGAFLFELLAGRI-----HIWDLLKDTHDHGC 182
G+ Y+APE IS + +++S G L+ LL G + H+ L K D
Sbjct: 176 --CGSPNYAAPEVISGRLYAGPEVDIWSSGVILYALLCGTLPFDDDHVPTLFKKICDGIF 233
Query: 183 FFNEYL 188
+ +YL
Sbjct: 234 YTPQYL 239
>pdb|2R5T|A Chain A, Crystal Structure Of Inactive Serum And Glucocorticoid-
Regulated Kinase 1 In Complex With Amp-Pnp
pdb|3HDM|A Chain A, Crystal Structure Of Serum And Glucocorticoid-Regulated
Kinase 1 In Complex With Compound 1
pdb|3HDN|A Chain A, Crystal Structure Of Serum And Glucocorticoid-Regulated
Kinase 1 In Complex With Compound 2
Length = 373
Score = 40.4 bits (93), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 36/114 (31%), Positives = 52/114 (45%), Gaps = 6/114 (5%)
Query: 53 YGTLRDCIFGAPLPRLKIASDIVNSLAYLHFGFPRPIVLRNFKTQNILFNEENVAKWFDF 112
Y R+ F P R A++I ++L YLH IV R+ K +NIL + + DF
Sbjct: 128 YHLQRERCFLEPRARF-YAAEIASALGYLH---SLNIVYRDLKPENILLDSQGHIVLTDF 183
Query: 113 LLSISIPEGETHITTDRVIGTRGYSAPEYISICVLNEKSNVFSFGAFLFELLAG 166
L E + TT GT Y APE + + + + GA L+E+L G
Sbjct: 184 GLCKE--NIEHNSTTSTFCGTPEYLAPEVLHKQPYDRTVDWWCLGAVLYEMLYG 235
>pdb|2FSO|X Chain X, Mitogen Activated Protein Kinase P38alpha (D176a)
Activating Mutant
Length = 367
Score = 40.4 bits (93), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 31/98 (31%), Positives = 45/98 (45%), Gaps = 15/98 (15%)
Query: 74 IVNSLAYLHFGFPRPIVLRNFKTQNILFNEENVAKWFDFLLSISIPEGETHITTDRVIG- 132
I+ L Y+H I+ R+ K N+ NE+ K DF G T D + G
Sbjct: 141 ILRGLKYIHSA---DIIHRDLKPSNLAVNEDCELKILDF--------GLARHTADEMTGY 189
Query: 133 --TRGYSAPE-YISICVLNEKSNVFSFGAFLFELLAGR 167
TR Y APE ++ N+ +++S G + ELL GR
Sbjct: 190 VATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGR 227
>pdb|3LW0|A Chain A, Igf-1rk In Complex With Ligand Msc1609119a-1
pdb|3LW0|B Chain B, Igf-1rk In Complex With Ligand Msc1609119a-1
pdb|3LW0|C Chain C, Igf-1rk In Complex With Ligand Msc1609119a-1
pdb|3LW0|D Chain D, Igf-1rk In Complex With Ligand Msc1609119a-1
Length = 304
Score = 40.4 bits (93), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 34/161 (21%), Positives = 74/161 (45%), Gaps = 17/161 (10%)
Query: 17 INNITYAAQMSHNHILKRIGCCLQTPIPILVFQSVEYG-------TLRDCIFGAPL---P 66
+N + + + +H+++ +G Q +++ + + G +LR + P+ P
Sbjct: 66 LNEASVMKEFNCHHVVRLLGVVSQGQPTLVIMELMTRGDLKSYLRSLRPAMANNPVLAPP 125
Query: 67 RL----KIASDIVNSLAYLHFGFPRPIVLRNFKTQNILFNEENVAKWFDFLLSISIPEGE 122
L ++A +I + +AYL+ V R+ +N + E+ K DF ++ I E +
Sbjct: 126 SLSKMIQMAGEIADGMAYLN---ANKFVHRDLAARNCMVAEDFTVKIGDFGMTRDIYETD 182
Query: 123 THITTDRVIGTRGYSAPEYISICVLNEKSNVFSFGAFLFEL 163
+ + + + +PE + V S+V+SFG L+E+
Sbjct: 183 YYRKGGKGLLPVRWMSPESLKDGVFTTYSDVWSFGVVLWEI 223
>pdb|3A4P|A Chain A, Human C-Met Kinase Domain Complexed With
6-Benzyloxyquinoline Inhibitor
Length = 319
Score = 40.4 bits (93), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 38/145 (26%), Positives = 69/145 (47%), Gaps = 7/145 (4%)
Query: 27 SHNHILKRIGCCLQTP-IPILVFQSVEYGTLRDCIFGAPL-PRLKIASDIVNSLAY-LHF 83
SH ++L +G CL++ P++V +++G LR+ I P +K +A + F
Sbjct: 94 SHPNVLSLLGICLRSEGSPLVVLPYMKHGDLRNFIRNETHNPTVKDLIGFGLQVAKGMKF 153
Query: 84 GFPRPIVLRNFKTQNILFNEENVAKWFDFLLSISIPEGE---THITTDRVIGTRGYSAPE 140
+ V R+ +N + +E+ K DF L+ + + E H T + + + A E
Sbjct: 154 LASKKFVHRDLAARNCMLDEKFTVKVADFGLARDMYDKEFDSVHNKTGAKLPVK-WMALE 212
Query: 141 YISICVLNEKSNVFSFGAFLFELLA 165
+ KS+V+SFG L+EL+
Sbjct: 213 SLQTQKFTTKSDVWSFGVLLWELMT 237
>pdb|3GC9|A Chain A, The Structure Of P38beta C119s, C162s In Complex With A
Dihydroquinazolinone Inhibitor
pdb|3GC9|B Chain B, The Structure Of P38beta C119s, C162s In Complex With A
Dihydroquinazolinone Inhibitor
Length = 370
Score = 40.4 bits (93), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 35/137 (25%), Positives = 60/137 (43%), Gaps = 21/137 (15%)
Query: 74 IVNSLAYLHFGFPRPIVLRNFKTQNILFNEENVAKWFDFLLSISIPEGETHITTDRVIGT 133
++ L Y+H I+ R+ K N+ NE++ + DF L+ E T + T
Sbjct: 140 LLRGLKYIHSA---GIIHRDLKPSNVAVNEDSELRILDFGLARQADEEMTG-----YVAT 191
Query: 134 RGYSAPE-YISICVLNEKSNVFSFGAFLFELLAGRIHIWDLLKDTHDHGCFFNEYLKNYL 192
R Y APE ++ N+ +++S G + ELL G+ G + + LK +
Sbjct: 192 RWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLQGKALF---------PGSDYIDQLKRIM 242
Query: 193 EDKRFTGIPAPIIVQDI 209
E G P+P ++ I
Sbjct: 243 E---VVGTPSPEVLAKI 256
>pdb|3GC8|A Chain A, The Structure Of P38beta C162s In Complex With A
Dihydroquinazolinone
pdb|3GC8|B Chain B, The Structure Of P38beta C162s In Complex With A
Dihydroquinazolinone
Length = 370
Score = 40.4 bits (93), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 35/137 (25%), Positives = 60/137 (43%), Gaps = 21/137 (15%)
Query: 74 IVNSLAYLHFGFPRPIVLRNFKTQNILFNEENVAKWFDFLLSISIPEGETHITTDRVIGT 133
++ L Y+H I+ R+ K N+ NE++ + DF L+ E T + T
Sbjct: 140 LLRGLKYIHSA---GIIHRDLKPSNVAVNEDSELRILDFGLARQADEEMTG-----YVAT 191
Query: 134 RGYSAPE-YISICVLNEKSNVFSFGAFLFELLAGRIHIWDLLKDTHDHGCFFNEYLKNYL 192
R Y APE ++ N+ +++S G + ELL G+ G + + LK +
Sbjct: 192 RWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLQGKALF---------PGSDYIDQLKRIM 242
Query: 193 EDKRFTGIPAPIIVQDI 209
E G P+P ++ I
Sbjct: 243 E---VVGTPSPEVLAKI 256
>pdb|3DKC|A Chain A, Sgx Clone 5698a65kfg1h1
pdb|3DKF|A Chain A, Sgx Clone 5698a65kfg1h1
Length = 317
Score = 40.4 bits (93), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 38/145 (26%), Positives = 69/145 (47%), Gaps = 7/145 (4%)
Query: 27 SHNHILKRIGCCLQTP-IPILVFQSVEYGTLRDCIFGAPL-PRLKIASDIVNSLAY-LHF 83
SH ++L +G CL++ P++V +++G LR+ I P +K +A + F
Sbjct: 90 SHPNVLSLLGICLRSEGSPLVVLPYMKHGDLRNFIRNETHNPTVKDLIGFGLQVAKGMKF 149
Query: 84 GFPRPIVLRNFKTQNILFNEENVAKWFDFLLSISIPEGE---THITTDRVIGTRGYSAPE 140
+ V R+ +N + +E+ K DF L+ + + E H T + + + A E
Sbjct: 150 LASKKFVHRDLAARNCMLDEKFTVKVADFGLARDMYDKEFDSVHNKTGAKLPVK-WMALE 208
Query: 141 YISICVLNEKSNVFSFGAFLFELLA 165
+ KS+V+SFG L+EL+
Sbjct: 209 SLQTQKFTTKSDVWSFGVLLWELMT 233
>pdb|2OZA|B Chain B, Structure Of P38alpha Complex
pdb|3P78|A Chain A, P38 Inhibitor-Bound
pdb|3P79|A Chain A, P38 Inhibitor-Bound
pdb|3P7A|A Chain A, P38 Inhibitor-Bound
pdb|3P7B|A Chain A, P38 Inhibitor-Bound
pdb|3P7C|A Chain A, P38 Inhibitor-Bound
pdb|3P5K|A Chain A, P38 Inhibitor-Bound
Length = 366
Score = 40.4 bits (93), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 31/98 (31%), Positives = 45/98 (45%), Gaps = 15/98 (15%)
Query: 74 IVNSLAYLHFGFPRPIVLRNFKTQNILFNEENVAKWFDFLLSISIPEGETHITTDRVIG- 132
I+ L Y+H I+ R+ K N+ NE+ K DF G T D + G
Sbjct: 140 ILRGLKYIHSA---DIIHRDLKPSNLAVNEDCELKILDF--------GLARHTDDEMTGY 188
Query: 133 --TRGYSAPE-YISICVLNEKSNVFSFGAFLFELLAGR 167
TR Y APE ++ N+ +++S G + ELL GR
Sbjct: 189 VATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGR 226
>pdb|3CTH|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of The
Hepatocyte Growth Factor Receptor C-Met In Complex With
A Aminopyridine Based Inhibitor
pdb|3CTJ|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of The
Hepatocyte Growth Factor Receptor C-Met In Complex With
A Aminopyridine Based Inhibitor
pdb|3CE3|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of The
Hepatocyte Growth Factor Receptor C-Met In Complex With
A Pyrrolopyridinepyridone Based Inhibitor
pdb|3F82|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of The
Hepatocyte Growth Factor Receptor C-Met In Complex With
N-
(4-(2-Amino-3-Chloropyridin-4-Yloxy)-3-Fluorophenyl)-4-
Ethoxy-1-(4-Fluorophenyl)-2-Oxo-1,2-Dihydropyridine-3-
Carboxamide
pdb|3L8V|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of The
Hepat Growth Factor Receptor C-Met In Complex With A
Biarylamine Inhibitor
Length = 314
Score = 40.4 bits (93), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 38/145 (26%), Positives = 69/145 (47%), Gaps = 7/145 (4%)
Query: 27 SHNHILKRIGCCLQTP-IPILVFQSVEYGTLRDCIFGAPL-PRLKIASDIVNSLAY-LHF 83
SH ++L +G CL++ P++V +++G LR+ I P +K +A + F
Sbjct: 89 SHPNVLSLLGICLRSEGSPLVVLPYMKHGDLRNFIRNETHNPTVKDLIGFGLQVAKGMKF 148
Query: 84 GFPRPIVLRNFKTQNILFNEENVAKWFDFLLSISIPEGE---THITTDRVIGTRGYSAPE 140
+ V R+ +N + +E+ K DF L+ + + E H T + + + A E
Sbjct: 149 LASKKFVHRDLAARNCMLDEKFTVKVADFGLARDMYDKEFDSVHNKTGAKLPVK-WMALE 207
Query: 141 YISICVLNEKSNVFSFGAFLFELLA 165
+ KS+V+SFG L+EL+
Sbjct: 208 SLQTQKFTTKSDVWSFGVLLWELMT 232
>pdb|2PUU|A Chain A, Crystal Structure Of P38 Complex With 1-(5-Tert-Butyl-2-P-
Tolyl-2h-Pyrazol-3-Yl)-3-[4-(6-Morpholin-4-Ylmethyl-
Pyridin-3-Yl)naphthalen-1-Yl]urea
pdb|3CTQ|A Chain A, Structure Of Map Kinase P38 In Complex With A
1-O-Tolyl-1,2, 3-Triazole-4-Carboxamide
Length = 348
Score = 40.4 bits (93), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 40/161 (24%), Positives = 63/161 (39%), Gaps = 51/161 (31%)
Query: 11 HTYGSCINNITYAAQMSHNHILKRIGCCLQTPIPILVFQSVEYGTLRDCIFGAPLPRLKI 70
H G+ +NNI A+++ +H+ L++Q
Sbjct: 103 HLMGADLNNIVKCAKLTDDHV------------QFLIYQ--------------------- 129
Query: 71 ASDIVNSLAYLHFGFPRPIVLRNFKTQNILFNEENVAKWFDFLLSISIPEGETHITTDRV 130
I+ L Y+H I+ R+ K N+ NE+ K DF G T D +
Sbjct: 130 ---ILRGLKYIHSA---DIIHRDLKPSNLAVNEDCELKILDF--------GLARHTDDEM 175
Query: 131 IG---TRGYSAPE-YISICVLNEKSNVFSFGAFLFELLAGR 167
G TR Y APE ++ N+ +++S G + ELL GR
Sbjct: 176 TGYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGR 216
>pdb|3PJC|A Chain A, Crystal Structure Of Jak3 Complexed With A Potent Atp Site
Inhibitor Showing High Selectivity Within The Janus
Kinase Family
Length = 315
Score = 40.4 bits (93), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 29/98 (29%), Positives = 48/98 (48%), Gaps = 4/98 (4%)
Query: 68 LKIASDIVNSLAYLHFGFPRPIVLRNFKTQNILFNEENVAKWFDFLLSISIP-EGETHIT 126
L +S I + YL R V R+ +NIL E K DF L+ +P + + ++
Sbjct: 118 LLYSSQICKGMEYLG---SRRCVHRDLAARNILVESEAHVKIADFGLAKLLPLDKDYYVV 174
Query: 127 TDRVIGTRGYSAPEYISICVLNEKSNVFSFGAFLFELL 164
+ + APE +S + + +S+V+SFG L+EL
Sbjct: 175 REPGQSPIFWYAPESLSDNIFSRQSDVWSFGVVLYELF 212
>pdb|1IAN|A Chain A, Human P38 Map Kinase Inhibitor Complex
pdb|2QD9|A Chain A, P38 Alpha Map Kinase Inhibitor Based On Heterobicyclic
Scaffolds
pdb|2RG5|A Chain A, Phenylalanine Pyrrolotriazine P38 Alpha Map Kinase
Inhibitor Compound 11b
pdb|2RG6|A Chain A, Phenylalanine Pyrrolotriazine P38 Alpha Map Kinase
Inhibitor Compound 11j
pdb|3C5U|A Chain A, P38 Alpha Map Kinase Complexed With A Benzothiazole Based
Inhibitor
pdb|3BV2|A Chain A, Morpholino Pyrrolotriazine P38 Alpha Map Kinase Inhibitor
Compound 30
pdb|3BV3|A Chain A, Morpholino Pyrrolotriazine P38 Alpha Map Kinase Inhibitor
Compound 2
pdb|3BX5|A Chain A, P38 Alpha Map Kinase Complexed With Bms-640994
pdb|3L8X|A Chain A, P38 Alpha Kinase Complexed With A Pyrazolo-Pyrimidine
Based Inhibitor
pdb|3NWW|A Chain A, P38 Alpha Kinase Complexed With A
2-Aminothiazol-5-Yl-Pyrimidine Based Inhibitor
pdb|3MVL|A Chain A, P38 Alpha Map Kinase Complexed With Pyrrolotriazine
Inhibitor 7k
pdb|3MVL|B Chain B, P38 Alpha Map Kinase Complexed With Pyrrolotriazine
Inhibitor 7k
pdb|3MVM|A Chain A, P38 Alpha Map Kinase Complexed With Pyrrolotriazine
Inhibitor 7v
pdb|3MVM|B Chain B, P38 Alpha Map Kinase Complexed With Pyrrolotriazine
Inhibitor 7v
pdb|3OCG|A Chain A, P38 Alpha Kinase Complexed With A 5-Amino-Pyrazole Based
Inhibitor
pdb|3S4Q|A Chain A, P38 Alpha Kinase Complexed With A Pyrazolo-Triazine Based
Inhibitor
Length = 366
Score = 40.4 bits (93), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 31/98 (31%), Positives = 45/98 (45%), Gaps = 15/98 (15%)
Query: 74 IVNSLAYLHFGFPRPIVLRNFKTQNILFNEENVAKWFDFLLSISIPEGETHITTDRVIG- 132
I+ L Y+H I+ R+ K N+ NE+ K DF G T D + G
Sbjct: 140 ILRGLKYIHSA---DIIHRDLKPSNLAVNEDCELKILDF--------GLARHTDDEMTGY 188
Query: 133 --TRGYSAPE-YISICVLNEKSNVFSFGAFLFELLAGR 167
TR Y APE ++ N+ +++S G + ELL GR
Sbjct: 189 VATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGR 226
>pdb|3LXK|A Chain A, Structural And Thermodynamic Characterization Of The Tyk2
And Jak3 Kinase Domains In Complex With Cp-690550 And
Cmp-6
pdb|3LXL|A Chain A, Structural And Thermodynamic Characterization Of The Tyk2
And Jak3 Kinase Domains In Complex With Cp-690550 And
Cmp-6
Length = 327
Score = 40.4 bits (93), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 29/98 (29%), Positives = 48/98 (48%), Gaps = 4/98 (4%)
Query: 68 LKIASDIVNSLAYLHFGFPRPIVLRNFKTQNILFNEENVAKWFDFLLSISIP-EGETHIT 126
L +S I + YL R V R+ +NIL E K DF L+ +P + + ++
Sbjct: 130 LLYSSQICKGMEYLG---SRRCVHRDLAARNILVESEAHVKIADFGLAKLLPLDKDYYVV 186
Query: 127 TDRVIGTRGYSAPEYISICVLNEKSNVFSFGAFLFELL 164
+ + APE +S + + +S+V+SFG L+EL
Sbjct: 187 REPGQSPIFWYAPESLSDNIFSRQSDVWSFGVVLYELF 224
>pdb|4HVD|A Chain A, Jak3 Kinase Domain In Complex With
2-cyclopropyl-5h-pyrrolo[2,3- B]pyrazine-7-carboxylic
Acid ((s)-1,2,2-trimethyl-propyl)-amide
pdb|4HVG|A Chain A, Jak3 Kinase Domain In Complex With
2-cyclopropyl-5h-pyrrolo[2,3- B]pyrazine-7-carboxylic
Acid ((s)-2-hydroxy-1,2-dimethyl-propyl)- Amide
pdb|4HVH|A Chain A, Jak3 Kinase Domain In Complex With
2-cyclopropyl-5h-pyrrolo[2,3- B]pyrazine-7-carboxylic
Acid ((r)-2-hydroxy-1,2-dimethyl-propyl
pdb|4HVI|A Chain A, Jak3 Kinase Domain In Complex With
2-cyclopropyl-5h-pyrrolo[2,3- B]pyrazine-7-carboxylic
Acid ((r)-1-methyl-2-oxo-2-piperidin-1-yl- Ethyl)-amide
Length = 314
Score = 40.0 bits (92), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 36/125 (28%), Positives = 60/125 (48%), Gaps = 9/125 (7%)
Query: 46 LVFQSVEYGTLRDCI--FGAPLPRLKI---ASDIVNSLAYLHFGFPRPIVLRNFKTQNIL 100
LV + + G LRD + A L ++ +S I + YL R V R+ +NIL
Sbjct: 90 LVMEYLPSGCLRDFLQRHRARLDASRLLLYSSQICKGMEYLG---SRRCVHRDLAARNIL 146
Query: 101 FNEENVAKWFDFLLSISIP-EGETHITTDRVIGTRGYSAPEYISICVLNEKSNVFSFGAF 159
E K DF L+ +P + + ++ + + APE +S + + +S+V+SFG
Sbjct: 147 VESEAHVKIADFGLAKLLPLDKDYYVVREPGQSPIFWYAPESLSDNIFSRQSDVWSFGVV 206
Query: 160 LFELL 164
L+EL
Sbjct: 207 LYELF 211
>pdb|1P4O|A Chain A, Structure Of Apo Unactivated Igf-1r Kinase Domain At 1.5a
Resolution.
pdb|1P4O|B Chain B, Structure Of Apo Unactivated Igf-1r Kinase Domain At 1.5a
Resolution
Length = 322
Score = 40.0 bits (92), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 34/161 (21%), Positives = 74/161 (45%), Gaps = 17/161 (10%)
Query: 17 INNITYAAQMSHNHILKRIGCCLQTPIPILVFQSVEYG-------TLRDCIFGAPL---P 66
+N + + + +H+++ +G Q +++ + + G +LR + P+ P
Sbjct: 76 LNEASVMKEFNCHHVVRLLGVVSQGQPTLVIMELMTRGDLKSYLRSLRPAMANNPVLAPP 135
Query: 67 RL----KIASDIVNSLAYLHFGFPRPIVLRNFKTQNILFNEENVAKWFDFLLSISIPEGE 122
L ++A +I + +AYL+ V R+ +N + E+ K DF ++ I E +
Sbjct: 136 SLSKMIQMAGEIADGMAYLN---ANKFVHRDLAARNCMVAEDFTVKIGDFGMTRDIYETD 192
Query: 123 THITTDRVIGTRGYSAPEYISICVLNEKSNVFSFGAFLFEL 163
+ + + + +PE + V S+V+SFG L+E+
Sbjct: 193 YYRKGGKGLLPVRWMSPESLKDGVFTTYSDVWSFGVVLWEI 233
>pdb|1LEW|A Chain A, Crystal Structure Of Map Kinase P38 Complexed To The
Docking Site On Its Nuclear Substrate Mef2a
pdb|1LEZ|A Chain A, Crystal Structure Of Map Kinase P38 Complexed To The
Docking Site On Its Activator Mkk3b
Length = 360
Score = 40.0 bits (92), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 31/98 (31%), Positives = 45/98 (45%), Gaps = 15/98 (15%)
Query: 74 IVNSLAYLHFGFPRPIVLRNFKTQNILFNEENVAKWFDFLLSISIPEGETHITTDRVIG- 132
I+ L Y+H I+ R+ K N+ NE+ K DF G T D + G
Sbjct: 134 ILRGLKYIHSA---DIIHRDLKPSNLAVNEDCELKILDF--------GLARHTDDEMTGY 182
Query: 133 --TRGYSAPE-YISICVLNEKSNVFSFGAFLFELLAGR 167
TR Y APE ++ N+ +++S G + ELL GR
Sbjct: 183 VATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGR 220
>pdb|3P4K|A Chain A, The Third Conformation Of P38a Map Kinase Observed In
Phosphorylated P38a And In Solution
Length = 370
Score = 40.0 bits (92), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 31/98 (31%), Positives = 45/98 (45%), Gaps = 15/98 (15%)
Query: 74 IVNSLAYLHFGFPRPIVLRNFKTQNILFNEENVAKWFDFLLSISIPEGETHITTDRVIG- 132
I+ L Y+H I+ R+ K N+ NE+ K DF G T D + G
Sbjct: 144 ILRGLKYIHSA---DIIHRDLKPSNLAVNEDCELKILDF--------GLARHTDDEMTGY 192
Query: 133 --TRGYSAPE-YISICVLNEKSNVFSFGAFLFELLAGR 167
TR Y APE ++ N+ +++S G + ELL GR
Sbjct: 193 VATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGR 230
>pdb|3C1X|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of The
Hepatocyte Growth Factor Receptor C-Met In Complex With
A Pyrrolotriazine Based Inhibitor
Length = 373
Score = 40.0 bits (92), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 38/145 (26%), Positives = 69/145 (47%), Gaps = 7/145 (4%)
Query: 27 SHNHILKRIGCCLQTP-IPILVFQSVEYGTLRDCIFGAPL-PRLKIASDIVNSLAY-LHF 83
SH ++L +G CL++ P++V +++G LR+ I P +K +A + F
Sbjct: 148 SHPNVLSLLGICLRSEGSPLVVLPYMKHGDLRNFIRNETHNPTVKDLIGFGLQVAKGMKF 207
Query: 84 GFPRPIVLRNFKTQNILFNEENVAKWFDFLLSISIPEGE---THITTDRVIGTRGYSAPE 140
+ V R+ +N + +E+ K DF L+ + + E H T + + + A E
Sbjct: 208 LASKKFVHRDLAARNCMLDEKFTVKVADFGLARDMYDKEFDSVHNKTGAKLPVK-WMALE 266
Query: 141 YISICVLNEKSNVFSFGAFLFELLA 165
+ KS+V+SFG L+EL+
Sbjct: 267 SLQTQKFTTKSDVWSFGVLLWELMT 291
>pdb|3ODY|X Chain X, Crystal Structure Of P38alpha Y323q Active Mutant
Length = 360
Score = 40.0 bits (92), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 31/98 (31%), Positives = 45/98 (45%), Gaps = 15/98 (15%)
Query: 74 IVNSLAYLHFGFPRPIVLRNFKTQNILFNEENVAKWFDFLLSISIPEGETHITTDRVIG- 132
I+ L Y+H I+ R+ K N+ NE+ K DF G T D + G
Sbjct: 134 ILRGLKYIHSA---DIIHRDLKPSNLAVNEDCELKILDF--------GLARHTDDEMTGY 182
Query: 133 --TRGYSAPE-YISICVLNEKSNVFSFGAFLFELLAGR 167
TR Y APE ++ N+ +++S G + ELL GR
Sbjct: 183 VATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGR 220
>pdb|3HVC|A Chain A, Crystal Structure Of Human P38alpha Map Kinase
Length = 362
Score = 40.0 bits (92), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 31/98 (31%), Positives = 45/98 (45%), Gaps = 15/98 (15%)
Query: 74 IVNSLAYLHFGFPRPIVLRNFKTQNILFNEENVAKWFDFLLSISIPEGETHITTDRVIG- 132
I+ L Y+H I+ R+ K N+ NE+ K DF G T D + G
Sbjct: 136 ILRGLKYIHSA---DIIHRDLKPSNLAVNEDCELKILDF--------GLARHTDDEMTGY 184
Query: 133 --TRGYSAPE-YISICVLNEKSNVFSFGAFLFELLAGR 167
TR Y APE ++ N+ +++S G + ELL GR
Sbjct: 185 VATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGR 222
>pdb|2QOB|A Chain A, Human Epha3 Kinase Domain, Base Structure
Length = 344
Score = 40.0 bits (92), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 55/228 (24%), Positives = 94/228 (41%), Gaps = 47/228 (20%)
Query: 24 AQMSHNHILKRIGCCLQTPIPILVFQSVEYGTL------RDCIFGAPLPRLKIASDIVNS 77
Q H +I++ G ++ ++V + +E G+L D F + + + I +
Sbjct: 72 GQFDHPNIIRLEGVVTKSKPVMIVTEXMENGSLDSFLRKHDAQFTV-IQLVGMLRGIASG 130
Query: 78 LAYLH-FGFPRPIVLRNFKTQNILFNEENVAKWFDFLLSISIPEGETHITTDRVIGTRG- 135
+ YL G+ V R+ +NIL N V K DF LS + + T TRG
Sbjct: 131 MKYLSDMGY----VHRDLAARNILINSNLVCKVSDFGLSRVLEDDPEAAYT-----TRGG 181
Query: 136 -----YSAPEYISICVLNEKSNVFSFGAFLFELLA-GRIHIWDLLKDTHDHGCFFNEYLK 189
+++PE I+ S+V+S+G L+E+++ G W++ + +K
Sbjct: 182 KIPIRWTSPEAIAYRKFTSASDVWSYGIVLWEVMSYGERPYWEMSN---------QDVIK 232
Query: 190 NYLEDKRFTGIPAPIIVQDIPCIEKEQQLHASAQLTLECVNNSPEDRP 237
E R +P P+ D P A QL L+C +RP
Sbjct: 233 AVDEGYR---LPPPM---DCPA--------ALYQLMLDCWQKDRNNRP 266
>pdb|2DQ7|X Chain X, Crystal Structure Of Fyn Kinase Domain Complexed With
Staurosporine
Length = 283
Score = 40.0 bits (92), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 56/221 (25%), Positives = 92/221 (41%), Gaps = 35/221 (15%)
Query: 25 QMSHNHILKRIGCCLQTPIPILVFQSVEYGTLRDCIFGA-----PLPRL-KIASDIVNSL 78
++ H+ +++ + PI I V + + G+L D + LP L +A+ + +
Sbjct: 60 KLKHDKLVQLYAVVSEEPIYI-VTEYMNKGSLLDFLKDGEGRALKLPNLVDMAAQVAAGM 118
Query: 79 AYLHFGFPRPIVLRNFKTQNILFNEENVAKWFDFLLSISIPEGETHITTDRVIGTRGYSA 138
AY+ + R+ ++ NIL + K DF L+ I + E + ++A
Sbjct: 119 AYIER---MNYIHRDLRSANILVGNGLICKIADFGLARLIEDNEXTARQGAKFPIK-WTA 174
Query: 139 PEYISICVLNEKSNVFSFGAFLFELLA-GRIHIWDLLKDTHDHGCFFNEYLKNYLEDKRF 197
PE KS+V+SFG L EL+ GR+ G E L+ +R
Sbjct: 175 PEAALYGRFTIKSDVWSFGILLTELVTKGRVPY---------PGMNNREVLEQV---ERG 222
Query: 198 TGIPAPIIVQDIPCIEKEQQLHASAQLTLECVNNSPEDRPT 238
+P P QD P LH +L + C PE+RPT
Sbjct: 223 YRMPCP---QDCPI-----SLH---ELMIHCWKKDPEERPT 252
>pdb|2BAJ|A Chain A, P38alpha Bound To Pyrazolourea
pdb|2BAK|A Chain A, P38alpha Map Kinase Bound To Mpaq
pdb|4A9Y|A Chain A, P38alpha Map Kinase Bound To Cmpd 8
pdb|4AA0|A Chain A, P38alpha Map Kinase Bound To Cmpd 2
pdb|4AA4|A Chain A, P38alpha Map Kinase Bound To Cmpd 22
pdb|4AAC|A Chain A, P38alpha Map Kinase Bound To Cmpd 29
Length = 365
Score = 40.0 bits (92), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 31/98 (31%), Positives = 45/98 (45%), Gaps = 15/98 (15%)
Query: 74 IVNSLAYLHFGFPRPIVLRNFKTQNILFNEENVAKWFDFLLSISIPEGETHITTDRVIG- 132
I+ L Y+H I+ R+ K N+ NE+ K DF G T D + G
Sbjct: 139 ILRGLKYIHSA---DIIHRDLKPSNLAVNEDCELKILDF--------GLARHTDDEMTGY 187
Query: 133 --TRGYSAPE-YISICVLNEKSNVFSFGAFLFELLAGR 167
TR Y APE ++ N+ +++S G + ELL GR
Sbjct: 188 VATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGR 225
>pdb|1M7Q|A Chain A, Crystal Structure Of P38 Map Kinase In Complex With A
Dihydroquinazolinone Inhibitor
pdb|1OUK|A Chain A, The Structure Of P38 Alpha In Complex With A
Pyridinylimidazole Inhibitor
pdb|1OUY|A Chain A, The Structure Of P38 Alpha In Complex With A
Dihydropyrido- Pyrimidine Inhibitor
pdb|1R39|A Chain A, The Structure Of P38alpha
pdb|1YQJ|A Chain A, Crystal Structure Of P38 Alpha In Complex With A Selective
Pyridazine Inhibitor
pdb|2OKR|A Chain A, Crystal Structure Of The P38a-Mapkap Kinase 2 Heterodimer
pdb|2OKR|D Chain D, Crystal Structure Of The P38a-Mapkap Kinase 2 Heterodimer
pdb|2ONL|A Chain A, Crystal Structure Of The P38a-Mapkap Kinase 2 Heterodimer
pdb|2ONL|B Chain B, Crystal Structure Of The P38a-Mapkap Kinase 2 Heterodimer
pdb|1WFC|A Chain A, Structure Of Apo, Unphosphorylated, P38 Mitogen Activated
Protein Kinase P38 (P38 Map Kinase) The Mammalian
Homologue Of The Yeast Hog1 Protein
pdb|3DS6|A Chain A, P38 Complex With A Phthalazine Inhibitor
pdb|3DS6|B Chain B, P38 Complex With A Phthalazine Inhibitor
pdb|3DS6|C Chain C, P38 Complex With A Phthalazine Inhibitor
pdb|3DS6|D Chain D, P38 Complex With A Phthalazine Inhibitor
pdb|3FC1|X Chain X, Crystal Structure Of P38 Kinase Bound To
Pyrimido-Pyridazinone Inhibitor
pdb|3GFE|A Chain A, Crystal Structure Of P38a Mitogen-Activated Protein Kinase
In Complex With A Pyrazolopyridinone Inhibitor
pdb|3ITZ|A Chain A, Crystal Structure Of P38a Mitogen-Activated Protein Kinase
In Complex With A Pyrazolopyridazine Inhibitor
pdb|3LHJ|A Chain A, Crystal Structure Of P38a Mitogen-Activated Protein Kinase
In Complex With A Pyrazolopyridinone Inhibitor.
pdb|3ZYA|A Chain A, Human P38 Map Kinase In Complex With 2-Amino-Phenylamino-
Dibenzosuberone
pdb|3U8W|A Chain A, Crystal Structure Of P38a Mitogen-Activated Protein Kinase
In Complex With A Triazolopyridazinone Inhibitor
Length = 366
Score = 40.0 bits (92), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 31/98 (31%), Positives = 45/98 (45%), Gaps = 15/98 (15%)
Query: 74 IVNSLAYLHFGFPRPIVLRNFKTQNILFNEENVAKWFDFLLSISIPEGETHITTDRVIG- 132
I+ L Y+H I+ R+ K N+ NE+ K DF G T D + G
Sbjct: 140 ILRGLKYIHSA---DIIHRDLKPSNLAVNEDCELKILDF--------GLARHTDDEMTGY 188
Query: 133 --TRGYSAPE-YISICVLNEKSNVFSFGAFLFELLAGR 167
TR Y APE ++ N+ +++S G + ELL GR
Sbjct: 189 VATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGR 226
>pdb|4AW5|A Chain A, Complex Of The Ephb4 Kinase Domain With An Oxindole
Inhibitor
Length = 291
Score = 40.0 bits (92), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 26/88 (29%), Positives = 44/88 (50%), Gaps = 4/88 (4%)
Query: 90 VLRNFKTQNILFNEENVAKWFDFLLSISIPEGETHITTDRVIGTR---GYSAPEYISICV 146
V R+ +NIL N V K DF LS + E + T +G + ++APE I+
Sbjct: 138 VHRDLAARNILVNSNLVCKVSDFGLSRFLEENSSDPTYTSSLGGKIPIRWTAPEAIAFRK 197
Query: 147 LNEKSNVFSFGAFLFELLA-GRIHIWDL 173
S+ +S+G ++E+++ G WD+
Sbjct: 198 FTSASDAWSYGIVMWEVMSFGERPYWDM 225
>pdb|3ZSG|A Chain A, X-Ray Structure Of P38alpha Bound To Tak-715
pdb|3ZSH|A Chain A, X-Ray Structure Of P38alpha Bound To Scio-469
pdb|3ZSI|A Chain A, X-Ray Structure Of P38alpha Bound To Vx-745
pdb|3ZS5|A Chain A, Structural Basis For Kinase Selectivity Of Three Clinical
P38alpha Inhibitors
Length = 362
Score = 40.0 bits (92), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 31/98 (31%), Positives = 45/98 (45%), Gaps = 15/98 (15%)
Query: 74 IVNSLAYLHFGFPRPIVLRNFKTQNILFNEENVAKWFDFLLSISIPEGETHITTDRVIG- 132
I+ L Y+H I+ R+ K N+ NE+ K DF G T D + G
Sbjct: 136 ILRGLKYIHSA---DIIHRDLKPSNLAVNEDCELKILDF--------GLARHTDDEMTGY 184
Query: 133 --TRGYSAPE-YISICVLNEKSNVFSFGAFLFELLAGR 167
TR Y APE ++ N+ +++S G + ELL GR
Sbjct: 185 VATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGR 222
>pdb|3HRB|A Chain A, P38 Kinase Crystal Structure In Complex With Small
Molecule Inhibitor
pdb|3MW1|A Chain A, P38 Kinase Crystal Structure In Complex With Small
Molecule Inhibitor
pdb|2YIS|A Chain A, Triazolopyridine Inhibitors Of P38 Kinase.
pdb|2YIW|A Chain A, Triazolopyridine Inhibitors Of P38 Kinase
Length = 359
Score = 40.0 bits (92), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 31/98 (31%), Positives = 45/98 (45%), Gaps = 15/98 (15%)
Query: 74 IVNSLAYLHFGFPRPIVLRNFKTQNILFNEENVAKWFDFLLSISIPEGETHITTDRVIG- 132
I+ L Y+H I+ R+ K N+ NE+ K DF G T D + G
Sbjct: 133 ILRGLKYIHSA---DIIHRDLKPSNLAVNEDCELKILDF--------GLARHTDDEMTGY 181
Query: 133 --TRGYSAPE-YISICVLNEKSNVFSFGAFLFELLAGR 167
TR Y APE ++ N+ +++S G + ELL GR
Sbjct: 182 VATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGR 219
>pdb|1BMK|A Chain A, The Complex Structure Of The Map Kinase P38SB218655
pdb|1P38|A Chain A, The Structure Of The Map Kinase P38 At 2.1 Angstoms
Resolution
Length = 379
Score = 40.0 bits (92), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 31/98 (31%), Positives = 45/98 (45%), Gaps = 15/98 (15%)
Query: 74 IVNSLAYLHFGFPRPIVLRNFKTQNILFNEENVAKWFDFLLSISIPEGETHITTDRVIG- 132
I+ L Y+H I+ R+ K N+ NE+ K DF G T D + G
Sbjct: 153 ILRGLKYIHSA---DIIHRDLKPSNLAVNEDCELKILDF--------GLARHTDDEMTGY 201
Query: 133 --TRGYSAPE-YISICVLNEKSNVFSFGAFLFELLAGR 167
TR Y APE ++ N+ +++S G + ELL GR
Sbjct: 202 VATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGR 239
>pdb|3TG1|A Chain A, Crystal Structure Of P38alpha In Complex With A Mapk
Docking Partner
Length = 380
Score = 40.0 bits (92), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 31/98 (31%), Positives = 45/98 (45%), Gaps = 15/98 (15%)
Query: 74 IVNSLAYLHFGFPRPIVLRNFKTQNILFNEENVAKWFDFLLSISIPEGETHITTDRVIG- 132
I+ L Y+H I+ R+ K N+ NE+ K DF G T D + G
Sbjct: 154 ILRGLKYIHSA---DIIHRDLKPSNLAVNEDCELKILDF--------GLARHTDDEMTGY 202
Query: 133 --TRGYSAPE-YISICVLNEKSNVFSFGAFLFELLAGR 167
TR Y APE ++ N+ +++S G + ELL GR
Sbjct: 203 VATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGR 240
>pdb|3ODZ|X Chain X, Crystal Structure Of P38alpha Y323r Active Mutant
Length = 360
Score = 40.0 bits (92), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 31/98 (31%), Positives = 45/98 (45%), Gaps = 15/98 (15%)
Query: 74 IVNSLAYLHFGFPRPIVLRNFKTQNILFNEENVAKWFDFLLSISIPEGETHITTDRVIG- 132
I+ L Y+H I+ R+ K N+ NE+ K DF G T D + G
Sbjct: 134 ILRGLKYIHSA---DIIHRDLKPSNLAVNEDCELKILDF--------GLARHTDDEMTGY 182
Query: 133 --TRGYSAPE-YISICVLNEKSNVFSFGAFLFELLAGR 167
TR Y APE ++ N+ +++S G + ELL GR
Sbjct: 183 VATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGR 220
>pdb|3GCU|A Chain A, Human P38 Map Kinase In Complex With Rl48
pdb|3GCU|B Chain B, Human P38 Map Kinase In Complex With Rl48
pdb|3HV4|A Chain A, Human P38 Map Kinase In Complex With Rl51
pdb|3HV4|B Chain B, Human P38 Map Kinase In Complex With Rl51
pdb|3HV5|A Chain A, Human P38 Map Kinase In Complex With Rl24
pdb|3HV5|B Chain B, Human P38 Map Kinase In Complex With Rl24
pdb|3HV6|A Chain A, Human P38 Map Kinase In Complex With Rl39
pdb|3HV7|A Chain A, Human P38 Map Kinase In Complex With Rl38
pdb|3HUC|A Chain A, Human P38 Map Kinase In Complex With Rl40
pdb|3LFA|A Chain A, Human P38 Map Kinase In Complex With Dasatinib
pdb|3QUE|A Chain A, Human P38 Map Kinase In Complex With Skepinone-L
pdb|3QUD|A Chain A, Human P38 Map Kinase In Complex With
2-Amino-Phenylamino-Benzophenone
pdb|3UVP|A Chain A, Human P38 Map Kinase In Complex With A Benzamide
Substituted Benzosuberone
pdb|3UVQ|A Chain A, Human P38 Map Kinase In Complex With A Dibenzosuberone
Derivative
pdb|4EH2|A Chain A, Human P38 Map Kinase In Complex With Np-F1 And Rl87
pdb|4EH3|A Chain A, Human P38 Map Kinase In Complex With Np-F2 And Rl87
pdb|4EH4|A Chain A, Human P38 Map Kinase In Complex With Np-F3 And Rl87
pdb|4EH5|A Chain A, Human P38 Map Kinase In Complex With Np-F4 And Rl87
pdb|4EH6|A Chain A, Human P38 Map Kinase In Complex With Np-F5 And Rl87
pdb|4EH7|A Chain A, Human P38 Map Kinase In Complex With Np-F6 And Rl87
pdb|4EH8|A Chain A, Human P38 Map Kinase In Complex With Np-F7 And Rl87
pdb|4EH9|A Chain A, Human P38 Map Kinase In Complex With Np-F11 And Rl87
pdb|4EHV|A Chain A, Human P38 Map Kinase In Complex With Np-F10 And Rl87
pdb|3UVR|A Chain A, Human P38 Map Kinase In Complex With Km064
pdb|4DLI|A Chain A, Human P38 Map Kinase In Complex With Rl87
pdb|4DLJ|A Chain A, Human P38 Map Kinase In Complex With Rl163
Length = 360
Score = 40.0 bits (92), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 31/98 (31%), Positives = 45/98 (45%), Gaps = 15/98 (15%)
Query: 74 IVNSLAYLHFGFPRPIVLRNFKTQNILFNEENVAKWFDFLLSISIPEGETHITTDRVIG- 132
I+ L Y+H I+ R+ K N+ NE+ K DF G T D + G
Sbjct: 134 ILRGLKYIHSA---DIIHRDLKPSNLAVNEDCELKILDF--------GLARHTDDEMTGY 182
Query: 133 --TRGYSAPE-YISICVLNEKSNVFSFGAFLFELLAGR 167
TR Y APE ++ N+ +++S G + ELL GR
Sbjct: 183 VATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGR 220
>pdb|1DI9|A Chain A, The Structure Of P38 Mitogen-Activated Protein Kinase In
Complex With 4-[3-Methylsulfanylanilino]-6,7-
Dimethoxyquinazoline
pdb|1KV1|A Chain A, P38 Map Kinase In Complex With Inhibitor 1
pdb|1KV2|A Chain A, Human P38 Map Kinase In Complex With Birb 796
pdb|1WBO|A Chain A, Fragment Based P38 Inhibitors
pdb|1W7H|A Chain A, P38 Kinase Crystal Structure In Complex With Small
Molecule Inhibitor
pdb|1W82|A Chain A, P38 Kinase Crystal Structure In Complex With Small
Molecule Inhibitor
pdb|1W83|A Chain A, P38 Kinase Crystal Structure In Complex With Small
Molecule Inhibitor
pdb|1W84|A Chain A, P38 Kinase Crystal Structure In Complex With Small
Molecule Inhibitor
pdb|1ZZ2|A Chain A, Two Classes Of P38alpha Map Kinase Inhibitors Having A
Common Diphenylether Core But Exhibiting Divergent
Binding Modes
pdb|1WBN|A Chain A, Fragment Based P38 Inhibitors
pdb|1WBS|A Chain A, Identification Of Novel P38 Alpha Map Kinase Inhibitors
Using Fragment-Based Lead Generation.
pdb|1WBT|A Chain A, Identification Of Novel P38 Alpha Map Kinase Inhibitors
Using Fragment-based Lead Generation.
pdb|1WBV|A Chain A, Identification Of Novel P38 Alpha Map Kinase Inhibitors
Using Fragment-Based Lead Generation.
pdb|1WBW|A Chain A, Identification Of Novel P38 Alpha Map Kinase Inhibitors
Using Fragment-Based Lead Generation.
pdb|1ZYJ|A Chain A, Human P38 Map Kinase In Complex With Inhibitor 1a
pdb|2ZAZ|A Chain A, Crystal Structure Of P38 In Complex With 4-Anilino
Quinoline Inhibitor
pdb|2ZB0|A Chain A, Crystal Structure Of P38 In Complex With Biphenyl Amide
Inhibitor
pdb|2ZB1|A Chain A, Crystal Structure Of P38 In Complex With Biphenyl Amide
Inhibitor
pdb|3HL7|A Chain A, Crystal Structure Of Human P38alpha Complexed With Sd-0006
pdb|3HLL|A Chain A, Crystal Structure Of Human P38alpha Complexed With
Ph-797804
pdb|3HP2|A Chain A, Crystal Structure Of Human P38alpha Complexed With A
Pyridinone Compound
pdb|3HP5|A Chain A, Crystal Structure Of Human P38alpha Complexed With A
Pyrimidopyridazinone Compound
pdb|3KF7|A Chain A, Crystal Structure Of Human P38alpha Complexed With A
Triazolopyrimidine Compound
pdb|3MGY|A Chain A, Mutagenesis Of P38 Map Kinase Eshtablishes Key Roles Of
Phe169 In Function And Structural Dynamics And Reveals A
Novel Dfg-Out State
pdb|3ROC|A Chain A, Crystal Structure Of Human P38 Alpha Complexed With A
Pyrimidinone Compound
pdb|3RIN|A Chain A, P38 Kinase Crystal Structure In Complex With Small
Molecule Inhibitor
pdb|4E5B|A Chain A, Structure Of P38a Map Kinase Without Bog
pdb|4E6A|A Chain A, P38a-Pia23 Complex
pdb|4E6C|A Chain A, P38a-perifosine Complex
pdb|4E8A|A Chain A, The Crystal Structure Of P38a Map Kinase In Complex With
Pia24
Length = 360
Score = 40.0 bits (92), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 31/98 (31%), Positives = 45/98 (45%), Gaps = 15/98 (15%)
Query: 74 IVNSLAYLHFGFPRPIVLRNFKTQNILFNEENVAKWFDFLLSISIPEGETHITTDRVIG- 132
I+ L Y+H I+ R+ K N+ NE+ K DF G T D + G
Sbjct: 134 ILRGLKYIHSA---DIIHRDLKPSNLAVNEDCELKILDF--------GLARHTDDEMTGY 182
Query: 133 --TRGYSAPE-YISICVLNEKSNVFSFGAFLFELLAGR 167
TR Y APE ++ N+ +++S G + ELL GR
Sbjct: 183 VATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGR 220
>pdb|3K3J|A Chain A, P38alpha Bound To Novel Dfg-Out Compound Pf-00416121
Length = 362
Score = 40.0 bits (92), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 31/98 (31%), Positives = 45/98 (45%), Gaps = 15/98 (15%)
Query: 74 IVNSLAYLHFGFPRPIVLRNFKTQNILFNEENVAKWFDFLLSISIPEGETHITTDRVIG- 132
I+ L Y+H I+ R+ K N+ NE+ K DF G T D + G
Sbjct: 136 ILRGLKYIHSA---DIIHRDLKPSNLAVNEDCELKILDF--------GLARHTDDEMTGY 184
Query: 133 --TRGYSAPE-YISICVLNEKSNVFSFGAFLFELLAGR 167
TR Y APE ++ N+ +++S G + ELL GR
Sbjct: 185 VATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGR 222
>pdb|3DT1|A Chain A, P38 Complexed With A Quinazoline Inhibitor
Length = 383
Score = 40.0 bits (92), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 31/98 (31%), Positives = 45/98 (45%), Gaps = 15/98 (15%)
Query: 74 IVNSLAYLHFGFPRPIVLRNFKTQNILFNEENVAKWFDFLLSISIPEGETHITTDRVIG- 132
I+ L Y+H I+ R+ K N+ NE+ K DF G T D + G
Sbjct: 157 ILRGLKYIHSA---DIIHRDLKPSNLAVNEDCELKILDF--------GLARHTDDEMTGY 205
Query: 133 --TRGYSAPE-YISICVLNEKSNVFSFGAFLFELLAGR 167
TR Y APE ++ N+ +++S G + ELL GR
Sbjct: 206 VATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGR 243
>pdb|3MPT|A Chain A, Crystal Structure Of P38 Kinase In Complex With A
Pyrrole-2- Carboxamide Inhibitor
Length = 371
Score = 40.0 bits (92), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 31/98 (31%), Positives = 45/98 (45%), Gaps = 15/98 (15%)
Query: 74 IVNSLAYLHFGFPRPIVLRNFKTQNILFNEENVAKWFDFLLSISIPEGETHITTDRVIG- 132
I+ L Y+H I+ R+ K N+ NE+ K DF G T D + G
Sbjct: 145 ILRGLKYIHSA---DIIHRDLKPSNLAVNEDCELKILDF--------GLARHTDDEMTGY 193
Query: 133 --TRGYSAPE-YISICVLNEKSNVFSFGAFLFELLAGR 167
TR Y APE ++ N+ +++S G + ELL GR
Sbjct: 194 VATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGR 231
>pdb|2NPQ|A Chain A, A Novel Lipid Binding Site In The P38 Alpha Map Kinase
Length = 367
Score = 40.0 bits (92), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 31/98 (31%), Positives = 45/98 (45%), Gaps = 15/98 (15%)
Query: 74 IVNSLAYLHFGFPRPIVLRNFKTQNILFNEENVAKWFDFLLSISIPEGETHITTDRVIG- 132
I+ L Y+H I+ R+ K N+ NE+ K DF G T D + G
Sbjct: 141 ILRGLKYIHSA---DIIHRDLKPSNLAVNEDCELKILDF--------GLARHTDDEMTGY 189
Query: 133 --TRGYSAPE-YISICVLNEKSNVFSFGAFLFELLAGR 167
TR Y APE ++ N+ +++S G + ELL GR
Sbjct: 190 VATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGR 227
>pdb|2GTM|A Chain A, Mutated Mouse P38 Map Kinase Domain In Complex With
Inhibitor Pg-892579
pdb|2GTN|A Chain A, Mutated Map Kinase P38 (mus Musculus) In Complex With
Inhbitor Pg-951717
Length = 348
Score = 40.0 bits (92), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 31/98 (31%), Positives = 45/98 (45%), Gaps = 15/98 (15%)
Query: 74 IVNSLAYLHFGFPRPIVLRNFKTQNILFNEENVAKWFDFLLSISIPEGETHITTDRVIG- 132
I+ L Y+H I+ R+ K N+ NE+ K DF G T D + G
Sbjct: 130 ILRGLKYIHSA---DIIHRDLKPSNLAVNEDCELKILDF--------GLARHTDDEMTGY 178
Query: 133 --TRGYSAPE-YISICVLNEKSNVFSFGAFLFELLAGR 167
TR Y APE ++ N+ +++S G + ELL GR
Sbjct: 179 VATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGR 216
>pdb|1JPA|A Chain A, Crystal Structure Of Unphosphorylated Ephb2 Receptor
Tyrosine Kinase And Juxtamembrane Region
pdb|1JPA|B Chain B, Crystal Structure Of Unphosphorylated Ephb2 Receptor
Tyrosine Kinase And Juxtamembrane Region
Length = 312
Score = 40.0 bits (92), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 43/153 (28%), Positives = 67/153 (43%), Gaps = 29/153 (18%)
Query: 90 VLRNFKTQNILFNEENVAKWFDFLLSISIPEGETHITTDRVIGTR---GYSAPEYISICV 146
V R+ +NIL N V K DF LS + + + T +G + ++APE I
Sbjct: 157 VHRDLAARNILVNSNLVCKVSDFGLSRFLEDDTSDPTYTSALGGKIPIRWTAPEAIQYRK 216
Query: 147 LNEKSNVFSFGAFLFELLA-GRIHIWDLLKDTHDHGCFFNEYLKNYLE-DKRFTGIPAPI 204
S+V+S+G ++E+++ G WD+ N+ + N +E D R +P P+
Sbjct: 217 FTSASDVWSYGIVMWEVMSYGERPYWDMT----------NQDVINAIEQDYR---LPPPM 263
Query: 205 IVQDIPCIEKEQQLHASAQLTLECVNNSPEDRP 237
D P LH QL L+C RP
Sbjct: 264 ---DCPS-----ALH---QLMLDCWQKDRNHRP 285
>pdb|2LGC|A Chain A, Joint Nmr And X-Ray Refinement Reveals The Structure Of A
Novel Dibenzo[a,D]cycloheptenone InhibitorP38 MAP KINASE
COMPLEX IN Solution
Length = 359
Score = 40.0 bits (92), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 31/98 (31%), Positives = 45/98 (45%), Gaps = 15/98 (15%)
Query: 74 IVNSLAYLHFGFPRPIVLRNFKTQNILFNEENVAKWFDFLLSISIPEGETHITTDRVIG- 132
I+ L Y+H I+ R+ K N+ NE+ K DF G T D + G
Sbjct: 139 ILRGLKYIHSA---DIIHRDLKPSNLAVNEDCELKILDF--------GLARHTDDEMTGY 187
Query: 133 --TRGYSAPE-YISICVLNEKSNVFSFGAFLFELLAGR 167
TR Y APE ++ N+ +++S G + ELL GR
Sbjct: 188 VATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGR 225
>pdb|3NNX|A Chain A, Crystal Structure Of Phosphorylated P38 Alpha In Complex
With Dp802
Length = 354
Score = 40.0 bits (92), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 31/98 (31%), Positives = 45/98 (45%), Gaps = 15/98 (15%)
Query: 74 IVNSLAYLHFGFPRPIVLRNFKTQNILFNEENVAKWFDFLLSISIPEGETHITTDRVIG- 132
I+ L Y+H I+ R+ K N+ NE+ K DF G T D + G
Sbjct: 134 ILRGLKYIHSA---DIIHRDLKPSNLAVNEDCELKILDF--------GLARHTDDEMTGX 182
Query: 133 --TRGYSAPE-YISICVLNEKSNVFSFGAFLFELLAGR 167
TR Y APE ++ N+ +++S G + ELL GR
Sbjct: 183 VATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGR 220
>pdb|3KQ7|A Chain A, Structure Of Human P38alpha With N-[4-Methyl-3-(6-{[2-(1-
Methylpyrrolidin-2-Yl)ethyl]amino}pyridine-3-
Amido)phenyl]- 2-(Morpholin-4-Yl)pyridine-4-Carboxamide
Length = 380
Score = 40.0 bits (92), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 31/98 (31%), Positives = 45/98 (45%), Gaps = 15/98 (15%)
Query: 74 IVNSLAYLHFGFPRPIVLRNFKTQNILFNEENVAKWFDFLLSISIPEGETHITTDRVIG- 132
I+ L Y+H I+ R+ K N+ NE+ K DF G T D + G
Sbjct: 154 ILRGLKYIHSA---DIIHRDLKPSNLAVNEDCELKILDF--------GLARHTDDEMTGY 202
Query: 133 --TRGYSAPE-YISICVLNEKSNVFSFGAFLFELLAGR 167
TR Y APE ++ N+ +++S G + ELL GR
Sbjct: 203 VATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGR 240
>pdb|3OD6|X Chain X, Crystal Structure Of P38alpha Y323t Active Mutant
Length = 360
Score = 40.0 bits (92), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 31/98 (31%), Positives = 45/98 (45%), Gaps = 15/98 (15%)
Query: 74 IVNSLAYLHFGFPRPIVLRNFKTQNILFNEENVAKWFDFLLSISIPEGETHITTDRVIG- 132
I+ L Y+H I+ R+ K N+ NE+ K DF G T D + G
Sbjct: 134 ILRGLKYIHSA---DIIHRDLKPSNLAVNEDCELKILDF--------GLARHTDDEMTGY 182
Query: 133 --TRGYSAPE-YISICVLNEKSNVFSFGAFLFELLAGR 167
TR Y APE ++ N+ +++S G + ELL GR
Sbjct: 183 VATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGR 220
>pdb|1BL6|A Chain A, The Complex Structure Of The Map Kinase P38SB216995
pdb|1BL7|A Chain A, The Complex Structure Of The Map Kinase P38SB220025
pdb|2EWA|A Chain A, Dual Binding Mode Of Pyridinylimidazole To Map Kinase P38
pdb|1A9U|A Chain A, The Complex Structure Of The Map Kinase P38SB203580
pdb|3HA8|A Chain A, The Complex Structure Of The Map Kinase P38COMPOUND 14B
Length = 379
Score = 40.0 bits (92), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 31/98 (31%), Positives = 45/98 (45%), Gaps = 15/98 (15%)
Query: 74 IVNSLAYLHFGFPRPIVLRNFKTQNILFNEENVAKWFDFLLSISIPEGETHITTDRVIG- 132
I+ L Y+H I+ R+ K N+ NE+ K DF G T D + G
Sbjct: 153 ILRGLKYIHSA---DIIHRDLKPSNLAVNEDCELKILDF--------GLARHTDDEMTGY 201
Query: 133 --TRGYSAPE-YISICVLNEKSNVFSFGAFLFELLAGR 167
TR Y APE ++ N+ +++S G + ELL GR
Sbjct: 202 VATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGR 239
>pdb|1OZ1|A Chain A, P38 Mitogen-Activated Kinase In Complex With 4-Azaindole
Inhibitor
Length = 372
Score = 40.0 bits (92), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 31/98 (31%), Positives = 45/98 (45%), Gaps = 15/98 (15%)
Query: 74 IVNSLAYLHFGFPRPIVLRNFKTQNILFNEENVAKWFDFLLSISIPEGETHITTDRVIG- 132
I+ L Y+H I+ R+ K N+ NE+ K DF G T D + G
Sbjct: 146 ILRGLKYIHSA---DIIHRDLKPSNLAVNEDCELKILDF--------GLARHTDDEMTGY 194
Query: 133 --TRGYSAPE-YISICVLNEKSNVFSFGAFLFELLAGR 167
TR Y APE ++ N+ +++S G + ELL GR
Sbjct: 195 VATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGR 232
>pdb|3PY3|A Chain A, Crystal Structure Of Phosphorylated P38alpha Map Kinase
Length = 380
Score = 40.0 bits (92), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 31/98 (31%), Positives = 45/98 (45%), Gaps = 15/98 (15%)
Query: 74 IVNSLAYLHFGFPRPIVLRNFKTQNILFNEENVAKWFDFLLSISIPEGETHITTDRVIG- 132
I+ L Y+H I+ R+ K N+ NE+ K DF G T D + G
Sbjct: 154 ILRGLKYIHSA---DIIHRDLKPSNLAVNEDCELKILDF--------GLARHTDDEMXGX 202
Query: 133 --TRGYSAPE-YISICVLNEKSNVFSFGAFLFELLAGR 167
TR Y APE ++ N+ +++S G + ELL GR
Sbjct: 203 VATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGR 240
>pdb|2GFS|A Chain A, P38 Kinase Crystal Structure In Complex With Ro3201195
pdb|3FKL|A Chain A, P38 Kinase Crystal Structure In Complex With Ro9552
pdb|3FKN|A Chain A, P38 Kinase Crystal Structure In Complex With Ro7125
pdb|3FL4|A Chain A, P38 Kinase Crystal Structure In Complex With Ro5634
pdb|3FLQ|A Chain A, P38 Kinase Crystal Structure In Complex With 6-(2,4-
Difluoro-Phenoxy)-2-((S)-2-Methanesulfonyl-1-Methyl-
Ethylamino)-8-Methyl-8h-Pyrido[2,3-D]pyrimidin
pdb|3FLS|A Chain A, P38 Kinase Crystal Structure In Complex With 6-(2,4-
Difluoro-Phenoxy)-2-((R)-2-Methanesulfonyl-1-Methyl-
Ethylamino)-8-Methyl-8h-Pyrido[2,3-D]pyrimidin-7-One
pdb|3FLW|A Chain A, P38 Kinase Crystal Structure In Complex With Pamapimod
pdb|3FLY|A Chain A, P38 Kinase Crystal Structure In Complex With 6-(2,4-
Difluoro-Phenoxy)-2-Isopropylamino-8-Methyl-8h-Pyrido[2,
3- D]pyrimidin-7-One
pdb|3FLZ|A Chain A, P38 Kinase Crystal Structure In Complex With
8-Methyl-6-Phenoxy-2-
(Tetrahydro-Pyran-4-Ylamino)-8h-Pyrido[2,
3-D]pyrimidin-7-One
pdb|3FMH|A Chain A, P38 Kinase Crystal Structure In Complex With
6-(2,4-Difluoro-Phenoxy)-
8-Methyl-2-((R)-1-Methyl-2-Tetrazol-2-Yl-Ethylamino)-8h-
Pyrido[2,3- D]pyrimidin-7-One
pdb|3FMJ|A Chain A, P38 Kinase Crystal Structure In Complex With
4-(5-Methyl-3-Phenyl- Isoxazol-4-Yl)-Pyrimidin-2-Ylamine
pdb|3FMK|A Chain A, P38 Kinase Crystal Structure In Complex With
6-(2,4-Difluoro-Phenoxy)-
8-Methyl-2-((S)-1-Methyl-2-Tetrazol-2-Yl-Ethylamino)-8h-
Pyrido[2,3- D]pyrimidin-7-One
pdb|3FML|A Chain A, P38 Kinase Crystal Structure In Complex With Ro6224
pdb|3FMM|A Chain A, P38 Kinase Crystal Structure In Complex With Ro6226
pdb|3FMN|A Chain A, P38 Kinase Crystal Structure In Complex With Ro2530
pdb|3FSF|A Chain A, P38 Kinase Crystal Structure In Complex With 3-(2,6-
Dichloro-Phenyl)-7-[4-(2-Diethylamino-Ethoxy)-
Phenylamino]-
1-Methyl-3,4-Dihydro-1h-Pyrimido[4,5-D]pyrimidin-2-One
pdb|3FSK|A Chain A, P38 Kinase Crystal Structure In Complex With Ro6257
Length = 372
Score = 40.0 bits (92), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 31/98 (31%), Positives = 45/98 (45%), Gaps = 15/98 (15%)
Query: 74 IVNSLAYLHFGFPRPIVLRNFKTQNILFNEENVAKWFDFLLSISIPEGETHITTDRVIG- 132
I+ L Y+H I+ R+ K N+ NE+ K DF G T D + G
Sbjct: 146 ILRGLKYIHSA---DIIHRDLKPSNLAVNEDCELKILDF--------GLARHTDDEMTGY 194
Query: 133 --TRGYSAPE-YISICVLNEKSNVFSFGAFLFELLAGR 167
TR Y APE ++ N+ +++S G + ELL GR
Sbjct: 195 VATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGR 232
>pdb|3HEC|A Chain A, P38 In Complex With Imatinib
pdb|3HEG|A Chain A, P38 In Complex With Sorafenib
Length = 348
Score = 40.0 bits (92), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 31/98 (31%), Positives = 45/98 (45%), Gaps = 15/98 (15%)
Query: 74 IVNSLAYLHFGFPRPIVLRNFKTQNILFNEENVAKWFDFLLSISIPEGETHITTDRVIG- 132
I+ L Y+H I+ R+ K N+ NE+ K DF G T D + G
Sbjct: 130 ILRGLKYIHSA---DIIHRDLKPSNLAVNEDCELKILDF--------GLARHTDDEMTGY 178
Query: 133 --TRGYSAPE-YISICVLNEKSNVFSFGAFLFELLAGR 167
TR Y APE ++ N+ +++S G + ELL GR
Sbjct: 179 VATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGR 216
>pdb|3OEF|X Chain X, Crystal Structure Of Y323f Inactive Mutant Of P38alpha Map
Kinase
Length = 360
Score = 40.0 bits (92), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 31/98 (31%), Positives = 45/98 (45%), Gaps = 15/98 (15%)
Query: 74 IVNSLAYLHFGFPRPIVLRNFKTQNILFNEENVAKWFDFLLSISIPEGETHITTDRVIG- 132
I+ L Y+H I+ R+ K N+ NE+ K DF G T D + G
Sbjct: 134 ILRGLKYIHSA---DIIHRDLKPSNLAVNEDCELKILDF--------GLARHTDDEMTGY 182
Query: 133 --TRGYSAPE-YISICVLNEKSNVFSFGAFLFELLAGR 167
TR Y APE ++ N+ +++S G + ELL GR
Sbjct: 183 VATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGR 220
>pdb|3FI4|A Chain A, P38 Kinase Crystal Structure In Complex With Ro4499
pdb|3FKO|A Chain A, P38 Kinase Crystal Structure In Complex With Ro3668
pdb|3FLN|C Chain C, P38 Kinase Crystal Structure In Complex With R1487
Length = 372
Score = 40.0 bits (92), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 31/98 (31%), Positives = 45/98 (45%), Gaps = 15/98 (15%)
Query: 74 IVNSLAYLHFGFPRPIVLRNFKTQNILFNEENVAKWFDFLLSISIPEGETHITTDRVIG- 132
I+ L Y+H I+ R+ K N+ NE+ K DF G T D + G
Sbjct: 146 ILRGLKYIHSA---DIIHRDLKPSNLAVNEDCELKILDF--------GLARHTDDEMTGY 194
Query: 133 --TRGYSAPE-YISICVLNEKSNVFSFGAFLFELLAGR 167
TR Y APE ++ N+ +++S G + ELL GR
Sbjct: 195 VATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGR 232
>pdb|1ZZL|A Chain A, Crystal Structure Of P38 With Triazolopyridine
pdb|2YIX|A Chain A, Triazolopyridine Inhibitors Of P38
Length = 351
Score = 40.0 bits (92), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 31/98 (31%), Positives = 45/98 (45%), Gaps = 15/98 (15%)
Query: 74 IVNSLAYLHFGFPRPIVLRNFKTQNILFNEENVAKWFDFLLSISIPEGETHITTDRVIG- 132
I+ L Y+H I+ R+ K N+ NE+ K DF G T D + G
Sbjct: 131 ILRGLKYIHSA---DIIHRDLKPSNLAVNEDCELKILDF--------GLARHTDDEMTGY 179
Query: 133 --TRGYSAPE-YISICVLNEKSNVFSFGAFLFELLAGR 167
TR Y APE ++ N+ +++S G + ELL GR
Sbjct: 180 VATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGR 217
>pdb|3K3I|A Chain A, P38alpha Bound To Novel Dgf-Out Compound Pf-00215955
Length = 350
Score = 40.0 bits (92), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 31/98 (31%), Positives = 45/98 (45%), Gaps = 15/98 (15%)
Query: 74 IVNSLAYLHFGFPRPIVLRNFKTQNILFNEENVAKWFDFLLSISIPEGETHITTDRVIG- 132
I+ L Y+H I+ R+ K N+ NE+ K DF G T D + G
Sbjct: 132 ILRGLKYIHSA---DIIHRDLKPSNLAVNEDCELKILDF--------GLARHTDDEMTGY 180
Query: 133 --TRGYSAPE-YISICVLNEKSNVFSFGAFLFELLAGR 167
TR Y APE ++ N+ +++S G + ELL GR
Sbjct: 181 VATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGR 218
>pdb|1YWR|A Chain A, Crystal Structure Analysis Of Inactive P38 Kinase Domain
In Complex With A Monocyclic Pyrazolone Inhibitor
Length = 360
Score = 40.0 bits (92), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 31/98 (31%), Positives = 45/98 (45%), Gaps = 15/98 (15%)
Query: 74 IVNSLAYLHFGFPRPIVLRNFKTQNILFNEENVAKWFDFLLSISIPEGETHITTDRVIG- 132
I+ L Y+H I+ R+ K N+ NE+ K DF G T D + G
Sbjct: 134 ILRGLKYIHSA---DIIHRDLKPSNLAVNEDCELKILDF--------GLARHTDDEMAGF 182
Query: 133 --TRGYSAPE-YISICVLNEKSNVFSFGAFLFELLAGR 167
TR Y APE ++ N+ +++S G + ELL GR
Sbjct: 183 VATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGR 220
>pdb|1YW2|A Chain A, Mutated Mus Musculus P38 Kinase (Mp38)
Length = 360
Score = 40.0 bits (92), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 31/98 (31%), Positives = 45/98 (45%), Gaps = 15/98 (15%)
Query: 74 IVNSLAYLHFGFPRPIVLRNFKTQNILFNEENVAKWFDFLLSISIPEGETHITTDRVIG- 132
I+ L Y+H I+ R+ K N+ NE+ K DF G T D + G
Sbjct: 134 ILRGLKYIHSA---DIIHRDLKPSNLAVNEDCELKILDF--------GLARHTDDEMAGF 182
Query: 133 --TRGYSAPE-YISICVLNEKSNVFSFGAFLFELLAGR 167
TR Y APE ++ N+ +++S G + ELL GR
Sbjct: 183 VATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGR 220
>pdb|3FXX|A Chain A, Human Epha3 Kinase And Juxtamembrane Region Bound To
Substrate Kqwdnye[ptyr]iw
pdb|3FY2|A Chain A, Human Epha3 Kinase And Juxtamembrane Region Bound To
Substrate Kqwdnyefiw
Length = 371
Score = 40.0 bits (92), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 55/228 (24%), Positives = 94/228 (41%), Gaps = 47/228 (20%)
Query: 24 AQMSHNHILKRIGCCLQTPIPILVFQSVEYGTL------RDCIFGAPLPRLKIASDIVNS 77
Q H +I++ G ++ ++V + +E G+L D F + + + I +
Sbjct: 99 GQFDHPNIIRLEGVVTKSKPVMIVTEYMENGSLDSFLRKHDAQFTV-IQLVGMLRGIASG 157
Query: 78 LAYLH-FGFPRPIVLRNFKTQNILFNEENVAKWFDFLLSISIPEGETHITTDRVIGTRG- 135
+ YL G+ V R+ +NIL N V K DF LS + + T TRG
Sbjct: 158 MKYLSDMGY----VHRDLAARNILINSNLVCKVSDFGLSRVLEDDPEAAYT-----TRGG 208
Query: 136 -----YSAPEYISICVLNEKSNVFSFGAFLFELLA-GRIHIWDLLKDTHDHGCFFNEYLK 189
+++PE I+ S+V+S+G L+E+++ G W++ + +K
Sbjct: 209 KIPIRWTSPEAIAYRKFTSASDVWSYGIVLWEVMSYGERPYWEMSN---------QDVIK 259
Query: 190 NYLEDKRFTGIPAPIIVQDIPCIEKEQQLHASAQLTLECVNNSPEDRP 237
E R +P P+ D P A QL L+C +RP
Sbjct: 260 AVDEGYR---LPPPM---DCPA--------ALYQLMLDCWQKDRNNRP 293
>pdb|3S3I|A Chain A, P38 Kinase Crystal Structure In Complex With Small
Molecule Inhibitor
Length = 349
Score = 40.0 bits (92), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 31/98 (31%), Positives = 45/98 (45%), Gaps = 15/98 (15%)
Query: 74 IVNSLAYLHFGFPRPIVLRNFKTQNILFNEENVAKWFDFLLSISIPEGETHITTDRVIG- 132
I+ L Y+H I+ R+ K N+ NE+ K DF G T D + G
Sbjct: 131 ILRGLKYIHSA---DIIHRDLKPSNLAVNEDCELKILDF--------GLARHTDDEMTGY 179
Query: 133 --TRGYSAPE-YISICVLNEKSNVFSFGAFLFELLAGR 167
TR Y APE ++ N+ +++S G + ELL GR
Sbjct: 180 VATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGR 217
>pdb|3NNU|A Chain A, Crystal Structure Of P38 Alpha In Complex With Dp1376
pdb|3NNV|A Chain A, Crystal Structure Of P38 Alpha In Complex With Dp437
pdb|3NNW|A Chain A, Crystal Structure Of P38 Alpha In Complex With Dp802
Length = 354
Score = 39.7 bits (91), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 31/98 (31%), Positives = 45/98 (45%), Gaps = 15/98 (15%)
Query: 74 IVNSLAYLHFGFPRPIVLRNFKTQNILFNEENVAKWFDFLLSISIPEGETHITTDRVIG- 132
I+ L Y+H I+ R+ K N+ NE+ K DF G T D + G
Sbjct: 134 ILRGLKYIHSA---DIIHRDLKPSNLAVNEDCELKILDF--------GLARHTDDEMTGY 182
Query: 133 --TRGYSAPE-YISICVLNEKSNVFSFGAFLFELLAGR 167
TR Y APE ++ N+ +++S G + ELL GR
Sbjct: 183 VATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGR 220
>pdb|3D7Z|A Chain A, Crystal Structure Of P38 Kinase In Complex With A Biphenyl
Amide Inhibitor
Length = 360
Score = 39.7 bits (91), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 31/98 (31%), Positives = 45/98 (45%), Gaps = 15/98 (15%)
Query: 74 IVNSLAYLHFGFPRPIVLRNFKTQNILFNEENVAKWFDFLLSISIPEGETHITTDRVIG- 132
I+ L Y+H I+ R+ K N+ NE+ K DF G T D + G
Sbjct: 134 ILRGLKYIHSA---DIIHRDLKPSNLAVNEDCELKILDF--------GLARHTDDEMTGY 182
Query: 133 --TRGYSAPE-YISICVLNEKSNVFSFGAFLFELLAGR 167
TR Y APE ++ N+ +++S G + ELL GR
Sbjct: 183 VATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGR 220
>pdb|4F4P|A Chain A, Syk In Complex With Ligand Lasw836
Length = 273
Score = 39.7 bits (91), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 36/147 (24%), Positives = 69/147 (46%), Gaps = 11/147 (7%)
Query: 25 QMSHNHILKRIGCCLQTPIPILVFQSVEYGTLRDCIFGAPLPRLKIASDIVNSLAY-LHF 83
Q+ + +I++ IG C + +LV + E G L + + K ++V+ ++ + +
Sbjct: 62 QLDNPYIVRMIGIC-EAESWMLVMEMAELGPLNKYLQQNRHVKDKNIIELVHQVSMGMKY 120
Query: 84 GFPRPIVLRNFKTQNILFNEENVAKWFDFLLSISIPEGETHITTDRVIGTRG-----YSA 138
V R+ +N+L ++ AK DF LS ++ E + T G + A
Sbjct: 121 LEESNFVHRDLAARNVLLVTQHYAKISDFGLSKALRADENYYKAQ----THGKWPVKWYA 176
Query: 139 PEYISICVLNEKSNVFSFGAFLFELLA 165
PE I+ + KS+V+SFG ++E +
Sbjct: 177 PECINYYKFSSKSDVWSFGVLMWEAFS 203
>pdb|3A4O|X Chain X, Lyn Kinase Domain
Length = 286
Score = 39.7 bits (91), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 30/106 (28%), Positives = 55/106 (51%), Gaps = 6/106 (5%)
Query: 65 LPRL-KIASDIVNSLAYLHFGFPRPIVLRNFKTQNILFNEENVAKWFDFLLSISIPEGET 123
LP+L ++ I +AY+ + + R+ + N+L +E + K DF L+ I + E
Sbjct: 109 LPKLIDFSAQIAEGMAYIE---RKNYIHRDLRAANVLVSESLMCKIADFGLARVIEDNE- 164
Query: 124 HITTDRVIGTRGYSAPEYISICVLNEKSNVFSFGAFLFELLA-GRI 168
+ + ++APE I+ KS+V+SFG L+E++ G+I
Sbjct: 165 YTAREGAKFPIKWTAPEAINFGCFTIKSDVWSFGILLYEIVTYGKI 210
>pdb|2GSF|A Chain A, The Human Epha3 Receptor Tyrosine Kinase And Juxtamembrane
Region
pdb|2QO2|A Chain A, Human Epha3 Kinase And Juxtamembrane Region,
Dephosphorylated, Apo Structure
pdb|2QO9|A Chain A, Human Epha3 Kinase And Juxtamembrane Region,
Phosphorylated, Amp-pnp Bound
Length = 373
Score = 39.7 bits (91), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 55/228 (24%), Positives = 94/228 (41%), Gaps = 47/228 (20%)
Query: 24 AQMSHNHILKRIGCCLQTPIPILVFQSVEYGTL------RDCIFGAPLPRLKIASDIVNS 77
Q H +I++ G ++ ++V + +E G+L D F + + + I +
Sbjct: 101 GQFDHPNIIRLEGVVTKSKPVMIVTEYMENGSLDSFLRKHDAQFTV-IQLVGMLRGIASG 159
Query: 78 LAYLH-FGFPRPIVLRNFKTQNILFNEENVAKWFDFLLSISIPEGETHITTDRVIGTRG- 135
+ YL G+ V R+ +NIL N V K DF LS + + T TRG
Sbjct: 160 MKYLSDMGY----VHRDLAARNILINSNLVCKVSDFGLSRVLEDDPEAAYT-----TRGG 210
Query: 136 -----YSAPEYISICVLNEKSNVFSFGAFLFELLA-GRIHIWDLLKDTHDHGCFFNEYLK 189
+++PE I+ S+V+S+G L+E+++ G W++ + +K
Sbjct: 211 KIPIRWTSPEAIAYRKFTSASDVWSYGIVLWEVMSYGERPYWEMSN---------QDVIK 261
Query: 190 NYLEDKRFTGIPAPIIVQDIPCIEKEQQLHASAQLTLECVNNSPEDRP 237
E R +P P+ D P A QL L+C +RP
Sbjct: 262 AVDEGYR---LPPPM---DCPA--------ALYQLMLDCWQKDRNNRP 295
>pdb|2QOF|A Chain A, Human Epha3 Kinase And Juxtamembrane Region, Y596f Mutant
Length = 373
Score = 39.7 bits (91), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 55/228 (24%), Positives = 94/228 (41%), Gaps = 47/228 (20%)
Query: 24 AQMSHNHILKRIGCCLQTPIPILVFQSVEYGTL------RDCIFGAPLPRLKIASDIVNS 77
Q H +I++ G ++ ++V + +E G+L D F + + + I +
Sbjct: 101 GQFDHPNIIRLEGVVTKSKPVMIVTEYMENGSLDSFLRKHDAQFTV-IQLVGMLRGIASG 159
Query: 78 LAYLH-FGFPRPIVLRNFKTQNILFNEENVAKWFDFLLSISIPEGETHITTDRVIGTRG- 135
+ YL G+ V R+ +NIL N V K DF LS + + T TRG
Sbjct: 160 MKYLSDMGY----VHRDLAARNILINSNLVCKVSDFGLSRVLEDDPEAAYT-----TRGG 210
Query: 136 -----YSAPEYISICVLNEKSNVFSFGAFLFELLA-GRIHIWDLLKDTHDHGCFFNEYLK 189
+++PE I+ S+V+S+G L+E+++ G W++ + +K
Sbjct: 211 KIPIRWTSPEAIAYRKFTSASDVWSYGIVLWEVMSYGERPYWEMSN---------QDVIK 261
Query: 190 NYLEDKRFTGIPAPIIVQDIPCIEKEQQLHASAQLTLECVNNSPEDRP 237
E R +P P+ D P A QL L+C +RP
Sbjct: 262 AVDEGYR---LPPPM---DCPA--------ALYQLMLDCWQKDRNNRP 295
>pdb|2QOD|A Chain A, Human Epha3 Kinase And Juxtamembrane Region, Y602f Mutant
Length = 373
Score = 39.7 bits (91), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 55/228 (24%), Positives = 94/228 (41%), Gaps = 47/228 (20%)
Query: 24 AQMSHNHILKRIGCCLQTPIPILVFQSVEYGTL------RDCIFGAPLPRLKIASDIVNS 77
Q H +I++ G ++ ++V + +E G+L D F + + + I +
Sbjct: 101 GQFDHPNIIRLEGVVTKSKPVMIVTEYMENGSLDSFLRKHDAQFTV-IQLVGMLRGIASG 159
Query: 78 LAYLH-FGFPRPIVLRNFKTQNILFNEENVAKWFDFLLSISIPEGETHITTDRVIGTRG- 135
+ YL G+ V R+ +NIL N V K DF LS + + T TRG
Sbjct: 160 MKYLSDMGY----VHRDLAARNILINSNLVCKVSDFGLSRVLEDDPEAAYT-----TRGG 210
Query: 136 -----YSAPEYISICVLNEKSNVFSFGAFLFELLA-GRIHIWDLLKDTHDHGCFFNEYLK 189
+++PE I+ S+V+S+G L+E+++ G W++ + +K
Sbjct: 211 KIPIRWTSPEAIAYRKFTSASDVWSYGIVLWEVMSYGERPYWEMSN---------QDVIK 261
Query: 190 NYLEDKRFTGIPAPIIVQDIPCIEKEQQLHASAQLTLECVNNSPEDRP 237
E R +P P+ D P A QL L+C +RP
Sbjct: 262 AVDEGYR---LPPPM---DCPA--------ALYQLMLDCWQKDRNNRP 295
>pdb|4DFL|A Chain A, Crystal Structure Of Spleen Tyrosine Kinase Complexed With
A Sulfonamidopyrazine Piperidine Inhibitor
pdb|4DFN|A Chain A, Crystal Structure Of Spleen Tyrosine Kinase Complexed With
An Adamantylpyrazine Inhibitor
Length = 274
Score = 39.7 bits (91), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 36/147 (24%), Positives = 69/147 (46%), Gaps = 11/147 (7%)
Query: 25 QMSHNHILKRIGCCLQTPIPILVFQSVEYGTLRDCIFGAPLPRLKIASDIVNSLAY-LHF 83
Q+ + +I++ IG C + +LV + E G L + + K ++V+ ++ + +
Sbjct: 64 QLDNPYIVRMIGIC-EAESWMLVMEMAELGPLNKYLQQNRHVKDKNIIELVHQVSMGMKY 122
Query: 84 GFPRPIVLRNFKTQNILFNEENVAKWFDFLLSISIPEGETHITTDRVIGTRG-----YSA 138
V R+ +N+L ++ AK DF LS ++ E + T G + A
Sbjct: 123 LEESNFVHRDLAARNVLLVTQHYAKISDFGLSKALRADENYYKAQ----THGKWPVKWYA 178
Query: 139 PEYISICVLNEKSNVFSFGAFLFELLA 165
PE I+ + KS+V+SFG ++E +
Sbjct: 179 PECINYYKFSSKSDVWSFGVLMWEAFS 205
>pdb|3TUB|A Chain A, Crystal Structure Of Syk Kinase Domain With 1-(5-(6,7-
Dimethoxyquinolin-4-Yloxy)pyridin-2-Yl)-3-((1r,2s)-2-
Phenylcyclopropyl)urea
Length = 293
Score = 39.7 bits (91), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 36/147 (24%), Positives = 69/147 (46%), Gaps = 11/147 (7%)
Query: 25 QMSHNHILKRIGCCLQTPIPILVFQSVEYGTLRDCIFGAPLPRLKIASDIVNSLAY-LHF 83
Q+ + +I++ IG C + +LV + E G L + + K ++V+ ++ + +
Sbjct: 84 QLDNPYIVRMIGIC-EAESWMLVMEMAELGPLNKYLQQNRHVKDKNIIELVHQVSMGMKY 142
Query: 84 GFPRPIVLRNFKTQNILFNEENVAKWFDFLLSISIPEGETHITTDRVIGTRG-----YSA 138
V R+ +N+L ++ AK DF LS ++ E + T G + A
Sbjct: 143 LEESNFVHRDLAARNVLLVTQHYAKISDFGLSKALRADENYYKAQ----THGKWPVKWYA 198
Query: 139 PEYISICVLNEKSNVFSFGAFLFELLA 165
PE I+ + KS+V+SFG ++E +
Sbjct: 199 PECINYYKFSSKSDVWSFGVLMWEAFS 225
>pdb|3VF8|A Chain A, Crystal Structure Of Spleen Tyrosine Kinase Syk Catalytic
Domain With Pyrazolylbenzimidazole Inhibitor 416
pdb|3VF9|A Chain A, Crystal Structure Of Spleen Tyrosine Kinase Syk Catalytic
Domain With Thienopyrazolylindole Inhibitor 027
pdb|3TUC|A Chain A, Crystal Structure Of Syk Kinase Domain With
1-Benzyl-N-(5-(6,7-
Dimethoxyquinolin-4-Yloxy)pyridin-2-Yl)-2-Oxo-1,
2-Dihydropyridine-3- Carboxamide
pdb|3TUD|A Chain A, Crystal Structure Of Syk Kinase Domain With
N-(4-Methyl-3-(8-Methyl-7-
Oxo-2-(Phenylamino)-7,8-Dihydropyrido[2,
3-D]pyrimidin-6-Yl)phenyl)-3- (Trifluoromethyl)benzamide
Length = 299
Score = 39.7 bits (91), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 36/147 (24%), Positives = 69/147 (46%), Gaps = 11/147 (7%)
Query: 25 QMSHNHILKRIGCCLQTPIPILVFQSVEYGTLRDCIFGAPLPRLKIASDIVNSLAY-LHF 83
Q+ + +I++ IG C + +LV + E G L + + K ++V+ ++ + +
Sbjct: 84 QLDNPYIVRMIGIC-EAESWMLVMEMAELGPLNKYLQQNRHVKDKNIIELVHQVSMGMKY 142
Query: 84 GFPRPIVLRNFKTQNILFNEENVAKWFDFLLSISIPEGETHITTDRVIGTRG-----YSA 138
V R+ +N+L ++ AK DF LS ++ E + T G + A
Sbjct: 143 LEESNFVHRDLAARNVLLVTQHYAKISDFGLSKALRADENYYKAQ----THGKWPVKWYA 198
Query: 139 PEYISICVLNEKSNVFSFGAFLFELLA 165
PE I+ + KS+V+SFG ++E +
Sbjct: 199 PECINYYKFSSKSDVWSFGVLMWEAFS 225
>pdb|3EMG|A Chain A, Discovery And Sar Of Novel 4-Thiazolyl-2-
Phenylaminopyrimidines As Potent Inhibitors Of Spleen
Tyrosine Kinase (Syk)
Length = 291
Score = 39.7 bits (91), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 36/147 (24%), Positives = 69/147 (46%), Gaps = 11/147 (7%)
Query: 25 QMSHNHILKRIGCCLQTPIPILVFQSVEYGTLRDCIFGAPLPRLKIASDIVNSLAY-LHF 83
Q+ + +I++ IG C + +LV + E G L + + K ++V+ ++ + +
Sbjct: 82 QLDNPYIVRMIGIC-EAESWMLVMEMAELGPLNKYLQQNRHVKDKNIIELVHQVSMGMKY 140
Query: 84 GFPRPIVLRNFKTQNILFNEENVAKWFDFLLSISIPEGETHITTDRVIGTRG-----YSA 138
V R+ +N+L ++ AK DF LS ++ E + T G + A
Sbjct: 141 LEESNFVHRDLAARNVLLVTQHYAKISDFGLSKALRADENYYKAQ----THGKWPVKWYA 196
Query: 139 PEYISICVLNEKSNVFSFGAFLFELLA 165
PE I+ + KS+V+SFG ++E +
Sbjct: 197 PECINYYKFSSKSDVWSFGVLMWEAFS 223
>pdb|2QOI|A Chain A, Human Epha3 Kinase And Juxtamembrane Region, Y596f:y602f
Double Mutant
Length = 373
Score = 39.7 bits (91), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 55/228 (24%), Positives = 94/228 (41%), Gaps = 47/228 (20%)
Query: 24 AQMSHNHILKRIGCCLQTPIPILVFQSVEYGTL------RDCIFGAPLPRLKIASDIVNS 77
Q H +I++ G ++ ++V + +E G+L D F + + + I +
Sbjct: 101 GQFDHPNIIRLEGVVTKSKPVMIVTEYMENGSLDSFLRKHDAQFTV-IQLVGMLRGIASG 159
Query: 78 LAYLH-FGFPRPIVLRNFKTQNILFNEENVAKWFDFLLSISIPEGETHITTDRVIGTRG- 135
+ YL G+ V R+ +NIL N V K DF LS + + T TRG
Sbjct: 160 MKYLSDMGY----VHRDLAARNILINSNLVCKVSDFGLSRVLEDDPEAAYT-----TRGG 210
Query: 136 -----YSAPEYISICVLNEKSNVFSFGAFLFELLA-GRIHIWDLLKDTHDHGCFFNEYLK 189
+++PE I+ S+V+S+G L+E+++ G W++ + +K
Sbjct: 211 KIPIRWTSPEAIAYRKFTSASDVWSYGIVLWEVMSYGERPYWEMSN---------QDVIK 261
Query: 190 NYLEDKRFTGIPAPIIVQDIPCIEKEQQLHASAQLTLECVNNSPEDRP 237
E R +P P+ D P A QL L+C +RP
Sbjct: 262 AVDEGYR---LPPPM---DCPA--------ALYQLMLDCWQKDRNNRP 295
>pdb|3SRV|B Chain B, Crystal Structure Of Spleen Tyrosine Kinase (Syk) In
Complex With A Diaminopyrimidine Carboxamide Inhibitor
Length = 277
Score = 39.7 bits (91), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 36/147 (24%), Positives = 69/147 (46%), Gaps = 11/147 (7%)
Query: 25 QMSHNHILKRIGCCLQTPIPILVFQSVEYGTLRDCIFGAPLPRLKIASDIVNSLAY-LHF 83
Q+ + +I++ IG C + +LV + E G L + + K ++V+ ++ + +
Sbjct: 68 QLDNPYIVRMIGIC-EAESWMLVMEMAELGPLNKYLQQNRHVKDKNIIELVHQVSMGMKY 126
Query: 84 GFPRPIVLRNFKTQNILFNEENVAKWFDFLLSISIPEGETHITTDRVIGTRG-----YSA 138
V R+ +N+L ++ AK DF LS ++ E + T G + A
Sbjct: 127 LEESNFVHRDLAARNVLLVTQHYAKISDFGLSKALRADENYYKAQ----THGKWPVKWYA 182
Query: 139 PEYISICVLNEKSNVFSFGAFLFELLA 165
PE I+ + KS+V+SFG ++E +
Sbjct: 183 PECINYYKFSSKSDVWSFGVLMWEAFS 209
>pdb|2GHL|A Chain A, Mutant Mus Musculus P38 Kinase Domain In Complex With
Inhibitor Pg-874743
pdb|2GHM|A Chain A, Mutated Map Kinase P38 (Mus Musculus) In Complex With
Inhbitor Pg-895449
Length = 348
Score = 39.7 bits (91), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 31/98 (31%), Positives = 45/98 (45%), Gaps = 15/98 (15%)
Query: 74 IVNSLAYLHFGFPRPIVLRNFKTQNILFNEENVAKWFDFLLSISIPEGETHITTDRVIG- 132
I+ L Y+H I+ R+ K N+ NE+ K DF G T D + G
Sbjct: 130 ILRGLKYIHSA---DIIHRDLKPSNLAVNEDCELKILDF--------GLARHTDDEMAGF 178
Query: 133 --TRGYSAPE-YISICVLNEKSNVFSFGAFLFELLAGR 167
TR Y APE ++ N+ +++S G + ELL GR
Sbjct: 179 VATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGR 216
>pdb|1XBA|A Chain A, Crystal Structure Of Apo Syk Tyrosine Kinase Domain
pdb|1XBB|A Chain A, Crystal Structure Of The Syk Tyrosine Kinase Domain With
Gleevec
pdb|1XBC|A Chain A, Crystal Structure Of The Syk Tyrosine Kinase Domain With
Staurosporin
pdb|3FQE|A Chain A, Crystal Structure Of Spleen Tyrosine Kinase Complexed With
Ym193306
pdb|3FQH|A Chain A, Crystal Structure Of Spleen Tyrosine Kinase Complexed With
A 2-Substituted 7-Azaindole
pdb|3FQH|B Chain B, Crystal Structure Of Spleen Tyrosine Kinase Complexed With
A 2-Substituted 7-Azaindole
pdb|3FQS|A Chain A, Crystal Structure Of Spleen Tyrosine Kinase Complexed With
R406
pdb|4FL1|A Chain A, Structural And Biophysical Characterization Of The Syk
Activation Switch
pdb|4FYN|A Chain A, Crystal Structure Of Spleen Tyrosine Kinase Complexed With
3-(8-{4-
[ethyl-(2-hydroxy-ethyl)-amino]-phenylamino}-imidazo[1,
2-a]pyrazin-5- Yl)-phenol
pdb|4FYO|A Chain A, Crystal Structure Of Spleen Tyrosine Kinase Complexed With
N-{(s)-1-
[7-(3,4-dimethoxy-phenylamino)-thiazolo[5,
4-d]pyrimidin-5-yl]- Pyrrolidin-3-yl}-terephthalamic
Acid
pdb|4FZ6|A Chain A, Crystal Structure Of Spleen Tyrosine Kinase Complexed With
[6-((s)-2-
Methyl-pyrrolidin-1-yl)-pyridin-2-yl]-(6-phenyl-
imidazo[1,2- B]pyridazin-8-yl)-amine
Length = 291
Score = 39.7 bits (91), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 36/147 (24%), Positives = 69/147 (46%), Gaps = 11/147 (7%)
Query: 25 QMSHNHILKRIGCCLQTPIPILVFQSVEYGTLRDCIFGAPLPRLKIASDIVNSLAY-LHF 83
Q+ + +I++ IG C + +LV + E G L + + K ++V+ ++ + +
Sbjct: 74 QLDNPYIVRMIGIC-EAESWMLVMEMAELGPLNKYLQQNRHVKDKNIIELVHQVSMGMKY 132
Query: 84 GFPRPIVLRNFKTQNILFNEENVAKWFDFLLSISIPEGETHITTDRVIGTRG-----YSA 138
V R+ +N+L ++ AK DF LS ++ E + T G + A
Sbjct: 133 LEESNFVHRDLAARNVLLVTQHYAKISDFGLSKALRADENYYKAQ----THGKWPVKWYA 188
Query: 139 PEYISICVLNEKSNVFSFGAFLFELLA 165
PE I+ + KS+V+SFG ++E +
Sbjct: 189 PECINYYKFSSKSDVWSFGVLMWEAFS 215
>pdb|1YVJ|A Chain A, Crystal Structure Of The Jak3 Kinase Domain In Complex
With A Staurosporine Analogue
Length = 290
Score = 39.7 bits (91), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 28/94 (29%), Positives = 46/94 (48%), Gaps = 4/94 (4%)
Query: 71 ASDIVNSLAYLHFGFPRPIVLRNFKTQNILFNEENVAKWFDFLLSISIP-EGETHITTDR 129
+S I + YL R V R+ +NIL E K DF L+ +P + + + +
Sbjct: 117 SSQICKGMEYLG---SRRCVHRDLAARNILVESEAHVKIADFGLAKLLPLDKDXXVVREP 173
Query: 130 VIGTRGYSAPEYISICVLNEKSNVFSFGAFLFEL 163
+ APE +S + + +S+V+SFG L+EL
Sbjct: 174 GQSPIFWYAPESLSDNIFSRQSDVWSFGVVLYEL 207
>pdb|4EWQ|A Chain A, Human P38 Alpha Mapk In Complex With A Pyridazine Based
Inhibitor
Length = 383
Score = 39.7 bits (91), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 31/98 (31%), Positives = 45/98 (45%), Gaps = 15/98 (15%)
Query: 74 IVNSLAYLHFGFPRPIVLRNFKTQNILFNEENVAKWFDFLLSISIPEGETHITTDRVIG- 132
I+ L Y+H I+ R+ K N+ NE+ K DF G T D + G
Sbjct: 157 ILRGLKYIHSA---DIIHRDLKPSNLAVNEDCELKILDF--------GLARHTDDEMXGY 205
Query: 133 --TRGYSAPE-YISICVLNEKSNVFSFGAFLFELLAGR 167
TR Y APE ++ N+ +++S G + ELL GR
Sbjct: 206 VATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGR 243
>pdb|2Y6M|A Chain A, Crystal Structure Of Epha4 Kinase Domain
pdb|2Y6O|A Chain A, Crystal Structure Of Epha4 Kinase Domain In Complex With
Dasatinib
Length = 291
Score = 39.3 bits (90), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 44/170 (25%), Positives = 71/170 (41%), Gaps = 44/170 (25%)
Query: 75 VNSLAYLHFGFPRPIVLRNFKTQNILFNEENVAKWFDFLLSISIPEGETHITTDRVIGTR 134
++ ++Y+H R+ +NIL N V K DF +S + + T TR
Sbjct: 132 LSDMSYVH---------RDLAARNILVNSNLVCKVSDFGMSRVLEDDPEAAYT-----TR 177
Query: 135 G------YSAPEYISICVLNEKSNVFSFGAFLFELLA-GRIHIWDLLKDTHDHGCFFNEY 187
G ++APE I+ S+V+S+G ++E+++ G WD+ +
Sbjct: 178 GGKIPIRWTAPEAIAYRKFTSASDVWSYGIVMWEVMSYGERPYWDMSN---------QDV 228
Query: 188 LKNYLEDKRFTGIPAPIIVQDIPCIEKEQQLHASAQLTLECVNNSPEDRP 237
+K E R +P P+ D P LH QL L+C DRP
Sbjct: 229 IKAIEEGYR---LPPPM---DCPI-----ALH---QLMLDCWQKERSDRP 264
>pdb|2XYU|A Chain A, Crystal Structure Of Epha4 Kinase Domain In Complex With
Vuf 12058
Length = 285
Score = 39.3 bits (90), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 44/170 (25%), Positives = 71/170 (41%), Gaps = 44/170 (25%)
Query: 75 VNSLAYLHFGFPRPIVLRNFKTQNILFNEENVAKWFDFLLSISIPEGETHITTDRVIGTR 134
++ ++Y+H R+ +NIL N V K DF +S + + T TR
Sbjct: 126 LSDMSYVH---------RDLAARNILVNSNLVCKVSDFGMSRVLEDDPEAAYT-----TR 171
Query: 135 G------YSAPEYISICVLNEKSNVFSFGAFLFELLA-GRIHIWDLLKDTHDHGCFFNEY 187
G ++APE I+ S+V+S+G ++E+++ G WD+ +
Sbjct: 172 GGKIPIRWTAPEAIAYRKFTSASDVWSYGIVMWEVMSYGERPYWDMSN---------QDV 222
Query: 188 LKNYLEDKRFTGIPAPIIVQDIPCIEKEQQLHASAQLTLECVNNSPEDRP 237
+K E R +P P+ D P LH QL L+C DRP
Sbjct: 223 IKAIEEGYR---LPPPM---DCPI-----ALH---QLMLDCWQKERSDRP 258
>pdb|3DZQ|A Chain A, Human Epha3 Kinase Domain In Complex With Inhibitor
Awl-Ii- 38.3
pdb|4G2F|A Chain A, Human Epha3 Kinase Domain In Complex With Compound 7
pdb|4GK2|A Chain A, Human Epha3 Kinase Domain In Complex With Ligand 66
pdb|4GK3|A Chain A, Human Epha3 Kinase Domain In Complex With Ligand 87
pdb|4GK4|A Chain A, Human Epha3 Kinase Domain In Complex With Ligand 90
Length = 361
Score = 39.3 bits (90), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 55/228 (24%), Positives = 94/228 (41%), Gaps = 47/228 (20%)
Query: 24 AQMSHNHILKRIGCCLQTPIPILVFQSVEYGTL------RDCIFGAPLPRLKIASDIVNS 77
Q H +I++ G ++ ++V + +E G+L D F + + + I +
Sbjct: 89 GQFDHPNIIRLEGVVTKSKPVMIVTEYMENGSLDSFLRKHDAQFTV-IQLVGMLRGIASG 147
Query: 78 LAYLH-FGFPRPIVLRNFKTQNILFNEENVAKWFDFLLSISIPEGETHITTDRVIGTRG- 135
+ YL G+ V R+ +NIL N V K DF LS + + T TRG
Sbjct: 148 MKYLSDMGY----VHRDLAARNILINSNLVCKVSDFGLSRVLEDDPEAAYT-----TRGG 198
Query: 136 -----YSAPEYISICVLNEKSNVFSFGAFLFELLA-GRIHIWDLLKDTHDHGCFFNEYLK 189
+++PE I+ S+V+S+G L+E+++ G W++ + +K
Sbjct: 199 KIPIRWTSPEAIAYRKFTSASDVWSYGIVLWEVMSYGERPYWEMSN---------QDVIK 249
Query: 190 NYLEDKRFTGIPAPIIVQDIPCIEKEQQLHASAQLTLECVNNSPEDRP 237
E R +P P+ D P A QL L+C +RP
Sbjct: 250 AVDEGYR---LPPPM---DCPA--------ALYQLMLDCWQKDRNNRP 283
>pdb|2HEL|A Chain A, Crystal Structure Of A Mutant Epha4 Kinase Domain (Y742a)
Length = 306
Score = 39.3 bits (90), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 43/155 (27%), Positives = 65/155 (41%), Gaps = 35/155 (22%)
Query: 90 VLRNFKTQNILFNEENVAKWFDFLLSISIPEGETHITTDRVIGTRG------YSAPEYIS 143
V R+ +NIL N V K DF +S + + T TRG ++APE I+
Sbjct: 153 VHRDLAARNILVNSNLVCKVSDFGMSRVLEDDPEAAYT-----TRGGKIPIRWTAPEAIA 207
Query: 144 ICVLNEKSNVFSFGAFLFELLA-GRIHIWDLLKDTHDHGCFFNEYLKNYLEDKRFTGIPA 202
S+V+S+G ++E+++ G WD+ + +K E R +P
Sbjct: 208 YRKFTSASDVWSYGIVMWEVMSYGERPYWDMSN---------QDVIKAIEEGYR---LPP 255
Query: 203 PIIVQDIPCIEKEQQLHASAQLTLECVNNSPEDRP 237
P+ D P LH QL L+C DRP
Sbjct: 256 PM---DCPI-----ALH---QLMLDCWQKERSDRP 279
>pdb|2QON|A Chain A, Human Epha3 Kinase And Juxtamembrane Region,
Y596f:y602f:y742a Triple Mutant
Length = 373
Score = 39.3 bits (90), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 54/227 (23%), Positives = 92/227 (40%), Gaps = 45/227 (19%)
Query: 24 AQMSHNHILKRIGCCLQTPIPILVFQSVEYGTL------RDCIFGAPLPRLKIASDIVNS 77
Q H +I++ G ++ ++V + +E G+L D F + + + I +
Sbjct: 101 GQFDHPNIIRLEGVVTKSKPVMIVTEXMENGSLDSFLRKHDAQFTV-IQLVGMLRGIASG 159
Query: 78 LAYLHFGFPRPIVLRNFKTQNILFNEENVAKWFDFLLSISIPEGETHITTDRVIGTRG-- 135
+ YL V R+ +NIL N V K DF LS + + T TRG
Sbjct: 160 MKYLS---DMGAVHRDLAARNILINSNLVCKVSDFGLSRVLEDDPEAAYT-----TRGGK 211
Query: 136 ----YSAPEYISICVLNEKSNVFSFGAFLFELLA-GRIHIWDLLKDTHDHGCFFNEYLKN 190
+++PE I+ S+V+S+G L+E+++ G W++ + +K
Sbjct: 212 IPIRWTSPEAIAYRKFTSASDVWSYGIVLWEVMSYGERPYWEMSN---------QDVIKA 262
Query: 191 YLEDKRFTGIPAPIIVQDIPCIEKEQQLHASAQLTLECVNNSPEDRP 237
E R +P P+ D P A QL L+C +RP
Sbjct: 263 VDEGYR---LPPPM---DCPA--------ALYQLMLDCWQKDRNNRP 295
>pdb|2QOC|A Chain A, Human Epha3 Kinase Domain, Phosphorylated, Amp-Pnp Bound
Structure
Length = 344
Score = 39.3 bits (90), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 55/228 (24%), Positives = 94/228 (41%), Gaps = 47/228 (20%)
Query: 24 AQMSHNHILKRIGCCLQTPIPILVFQSVEYGTL------RDCIFGAPLPRLKIASDIVNS 77
Q H +I++ G ++ ++V + +E G+L D F + + + I +
Sbjct: 72 GQFDHPNIIRLEGVVTKSKPVMIVTEYMENGSLDSFLRKHDAQFTV-IQLVGMLRGIASG 130
Query: 78 LAYLH-FGFPRPIVLRNFKTQNILFNEENVAKWFDFLLSISIPEGETHITTDRVIGTRG- 135
+ YL G+ V R+ +NIL N V K DF LS + + T TRG
Sbjct: 131 MKYLSDMGY----VHRDLAARNILINSNLVCKVSDFGLSRVLEDDPEAAYT-----TRGG 181
Query: 136 -----YSAPEYISICVLNEKSNVFSFGAFLFELLA-GRIHIWDLLKDTHDHGCFFNEYLK 189
+++PE I+ S+V+S+G L+E+++ G W++ + +K
Sbjct: 182 KIPIRWTSPEAIAYRKFTSASDVWSYGIVLWEVMSYGERPYWEMSN---------QDVIK 232
Query: 190 NYLEDKRFTGIPAPIIVQDIPCIEKEQQLHASAQLTLECVNNSPEDRP 237
E R +P P+ D P A QL L+C +RP
Sbjct: 233 AVDEGYR---LPPPM---DCPA--------ALYQLMLDCWQKDRNNRP 266
>pdb|1ZYC|A Chain A, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: Wild-
Type In Apo Form.
pdb|1ZYC|B Chain B, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: Wild-
Type In Apo Form.
pdb|1ZYC|C Chain C, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: Wild-
Type In Apo Form.
pdb|1ZYC|D Chain D, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: Wild-
Type In Apo Form.
pdb|1ZYD|A Chain A, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: Wild-
Type Complexed With Atp.
pdb|1ZYD|B Chain B, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: Wild-
Type Complexed With Atp
Length = 303
Score = 39.3 bits (90), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 40/163 (24%), Positives = 69/163 (42%), Gaps = 25/163 (15%)
Query: 22 YAAQMSHNHILKRIGCCLQTPIPILVFQSVEYGTLRDCIFGAPLPR-----LKIASDIVN 76
YAA + + +K + + + + E TL D I L + ++ I+
Sbjct: 68 YAAWLERRNFVKPMTAVKKKSTLFIQMEYCENRTLYDLIHSENLNQQRDEYWRLFRQILE 127
Query: 77 SLAYLHFGFPRPIVLRNFKTQNILFNEENVAKWFDF--------------LLSISIPEGE 122
+L+Y+H + I+ R+ K NI +E K DF L S ++P
Sbjct: 128 ALSYIH---SQGIIHRDLKPMNIFIDESRNVKIGDFGLAKNVHRSLDILKLDSQNLPGSS 184
Query: 123 THITTDRVIGTRGYSAPEYIS-ICVLNEKSNVFSFGAFLFELL 164
++T+ IGT Y A E + NEK +++S G FE++
Sbjct: 185 DNLTS--AIGTAMYVATEVLDGTGHYNEKIDMYSLGIIFFEMI 225
>pdb|2WQB|A Chain A, Structure Of The Tie2 Kinase Domain In Complex With A
Thiazolopyrimidine Inhibitor
Length = 324
Score = 39.3 bits (90), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 38/157 (24%), Positives = 66/157 (42%), Gaps = 24/157 (15%)
Query: 28 HNHILKRIGCCLQTPIPILVFQSVEYGTLRDCIFGAPL----PRLKIASDIVNSLA---Y 80
H +I+ +G C L + +G L D + + + P IA+ ++L+
Sbjct: 82 HPNIINLLGACEHRGYLYLAIEYAPHGNLLDFLRKSRVLETDPAFAIANSTASTLSSQQL 141
Query: 81 LHFGF----------PRPIVLRNFKTQNILFNEENVAKWFDFLLSISIPEGETHITTDRV 130
LHF + + RN +NIL E VAK DF LS + +
Sbjct: 142 LHFAADVARGMDYLSQKQFIHRNLAARNILVGENYVAKIADFGLSRG-----QEVYVKKT 196
Query: 131 IGTR--GYSAPEYISICVLNEKSNVFSFGAFLFELLA 165
+G + A E ++ V S+V+S+G L+E+++
Sbjct: 197 MGRLPVRWMAIESLNYSVYTTNSDVWSYGVLLWEIVS 233
>pdb|2W5A|A Chain A, Human Nek2 Kinase Adp-Bound
pdb|2WQO|A Chain A, Structure Of Nek2 Bound To The Aminopyridine Cct241950
pdb|2XK3|A Chain A, Structure Of Nek2 Bound To Aminopyrazine Compound 35
pdb|2XK4|A Chain A, Structure Of Nek2 Bound To Aminopyrazine Compound 17
pdb|2XK6|A Chain A, Structure Of Nek2 Bound To Aminopyrazine Compound 36
pdb|2XK7|A Chain A, Structure Of Nek2 Bound To Aminopyrazine Compound 23
pdb|2XK8|A Chain A, Structure Of Nek2 Bound To Aminopyrazine Compound 15
pdb|2XKC|A Chain A, Structure Of Nek2 Bound To Aminopyrazine Compound 14
pdb|2XKD|A Chain A, Structure Of Nek2 Bound To Aminopyrazine Compound 12
pdb|2XKF|A Chain A, Structure Of Nek2 Bound To Aminopyrazine Compound 2
pdb|2XKE|A Chain A, Structure Of Nek2 Bound To Aminipyrazine Compound 5
pdb|2XNM|A Chain A, Structure Of Nek2 Bound To Cct
pdb|2XNN|A Chain A, Structure Of Nek2 Bound To Cct242430
pdb|2XNO|A Chain A, Structure Of Nek2 Bound To Cct243779
pdb|2XNP|A Chain A, Structure Of Nek2 Bound To Cct244858
pdb|4AFE|A Chain A, Nek2 Bound To Hybrid Compound 21
Length = 279
Score = 39.3 bits (90), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 23/77 (29%), Positives = 40/77 (51%), Gaps = 2/77 (2%)
Query: 89 IVLRNFKTQNILFNEENVAKWFDFLLSISIPEGETHITTDRVIGTRGYSAPEYISICVLN 148
++ R+ K N+ + + K DF L+ + + T +GT Y +PE ++ N
Sbjct: 137 VLHRDLKPANVFLDGKQNVKLGDFGLARILNHDTSFAKT--FVGTPYYMSPEQMNRMSYN 194
Query: 149 EKSNVFSFGAFLFELLA 165
EKS+++S G L+EL A
Sbjct: 195 EKSDIWSLGCLLYELCA 211
>pdb|2JC6|A Chain A, Crystal Structure Of Human Calmodulin-Dependent Protein
Kinase 1d
pdb|2JC6|C Chain C, Crystal Structure Of Human Calmodulin-Dependent Protein
Kinase 1d
Length = 334
Score = 39.3 bits (90), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 40/128 (31%), Positives = 60/128 (46%), Gaps = 13/128 (10%)
Query: 46 LVFQSVEYGTLRDCIFGAPLPRLKIAS----DIVNSLAYLHFGFPRPIVLRNFKTQNILF 101
LV Q V G L D I K AS +++++ YLH IV R+ K +N+L+
Sbjct: 97 LVMQLVSGGELFDRIVEKGFYTEKDASTLIRQVLDAVYYLH---RMGIVHRDLKPENLLY 153
Query: 102 ---NEENVAKWFDFLLSISIPEGETHITTDRVIGTRGYSAPEYISICVLNEKSNVFSFGA 158
+EE+ DF LS +G+ T GT GY APE ++ ++ + +S G
Sbjct: 154 YSQDEESKIMISDFGLSKMEGKGDVMST---ACGTPGYVAPEVLAQKPYSKAVDCWSIGV 210
Query: 159 FLFELLAG 166
+ LL G
Sbjct: 211 IAYILLCG 218
>pdb|2ZM3|A Chain A, Complex Structure Of Insulin-Like Growth Factor Receptor
And Isoquinolinedione Inhibitor
pdb|2ZM3|B Chain B, Complex Structure Of Insulin-Like Growth Factor Receptor
And Isoquinolinedione Inhibitor
pdb|2ZM3|C Chain C, Complex Structure Of Insulin-Like Growth Factor Receptor
And Isoquinolinedione Inhibitor
pdb|2ZM3|D Chain D, Complex Structure Of Insulin-Like Growth Factor Receptor
And Isoquinolinedione Inhibitor
pdb|3F5P|A Chain A, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|B Chain B, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|C Chain C, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|D Chain D, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|E Chain E, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|F Chain F, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|G Chain G, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|H Chain H, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|I Chain I, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|J Chain J, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|K Chain K, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|M Chain M, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|L Chain L, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|R Chain R, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|S Chain S, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|T Chain T, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
Length = 308
Score = 39.3 bits (90), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 34/162 (20%), Positives = 72/162 (44%), Gaps = 19/162 (11%)
Query: 17 INNITYAAQMSHNHILKRIGCCLQTPIPILVFQSVEYGTLRDCIFG-----------APL 65
+N + + + +H+++ +G Q +++ + + G L+ + AP
Sbjct: 70 LNEASVMKEFNCHHVVRLLGVVSQGQPTLVIMELMTRGDLKSYLRSLRPEMENNPVLAP- 128
Query: 66 PRL----KIASDIVNSLAYLHFGFPRPIVLRNFKTQNILFNEENVAKWFDFLLSISIPEG 121
P L ++A +I + +AYL+ V R+ +N + E+ K DF ++ I E
Sbjct: 129 PSLSKMIQMAGEIADGMAYLN---ANKFVHRDLAARNCMVAEDFTVKIGDFGMTRDIXET 185
Query: 122 ETHITTDRVIGTRGYSAPEYISICVLNEKSNVFSFGAFLFEL 163
+ + + + +PE + V S+V+SFG L+E+
Sbjct: 186 DXXRKGGKGLLPVRWMSPESLKDGVFTTYSDVWSFGVVLWEI 227
>pdb|1K3A|A Chain A, Structure Of The Insulin-Like Growth Factor 1 Receptor
Kinase
Length = 299
Score = 39.3 bits (90), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 34/162 (20%), Positives = 72/162 (44%), Gaps = 19/162 (11%)
Query: 17 INNITYAAQMSHNHILKRIGCCLQTPIPILVFQSVEYGTLRDCIFG-----------APL 65
+N + + + +H+++ +G Q +++ + + G L+ + AP
Sbjct: 61 LNEASVMKEFNCHHVVRLLGVVSQGQPTLVIMELMTRGDLKSYLRSLRPEMENNPVLAP- 119
Query: 66 PRL----KIASDIVNSLAYLHFGFPRPIVLRNFKTQNILFNEENVAKWFDFLLSISIPEG 121
P L ++A +I + +AYL+ V R+ +N + E+ K DF ++ I E
Sbjct: 120 PSLSKMIQMAGEIADGMAYLN---ANKFVHRDLAARNCMVAEDFTVKIGDFGMTRDIXET 176
Query: 122 ETHITTDRVIGTRGYSAPEYISICVLNEKSNVFSFGAFLFEL 163
+ + + + +PE + V S+V+SFG L+E+
Sbjct: 177 DXXRKGGKGLLPVRWMSPESLKDGVFTTYSDVWSFGVVLWEI 218
>pdb|2BFY|A Chain A, Complex Of Aurora-B With Incenp And Hesperidin.
pdb|2BFY|B Chain B, Complex Of Aurora-B With Incenp And Hesperidin
Length = 284
Score = 39.3 bits (90), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 24/86 (27%), Positives = 39/86 (45%), Gaps = 4/86 (4%)
Query: 81 LHFGFPRPIVLRNFKTQNILFNEENVAKWFDFLLSISIPEGETHITTDRVIGTRGYSAPE 140
LH+ R ++ R+ K +N+L + K DF S+ P + + GT Y PE
Sbjct: 127 LHYCHERKVIHRDIKPENLLMGYKGELKIADFGWSVHAPS----LRRRXMCGTLDYLPPE 182
Query: 141 YISICVLNEKSNVFSFGAFLFELLAG 166
I +EK +++ G +E L G
Sbjct: 183 MIEGKTHDEKVDLWCAGVLCYEFLVG 208
>pdb|2BFX|A Chain A, Mechanism Of Aurora-B Activation By Incenp And Inhibition
By Hesperidin.
pdb|2BFX|B Chain B, Mechanism Of Aurora-B Activation By Incenp And Inhibition
By Hesperidin.
pdb|2VGP|A Chain A, Crystal Structure Of Aurora B Kinase In Complex With A
Aminothiazole Inhibitor
pdb|2VGP|B Chain B, Crystal Structure Of Aurora B Kinase In Complex With A
Aminothiazole Inhibitor
pdb|2VGO|A Chain A, Crystal Structure Of Aurora B Kinase In Complex With
Reversine Inhibitor
pdb|2VGO|B Chain B, Crystal Structure Of Aurora B Kinase In Complex With
Reversine Inhibitor
pdb|3ZTX|A Chain A, Aurora Kinase Selective Inhibitors Identified Using A
Taxol- Induced Checkpoint Sensitivity Screen.
pdb|3ZTX|B Chain B, Aurora Kinase Selective Inhibitors Identified Using A
Taxol- Induced Checkpoint Sensitivity Screen
Length = 284
Score = 38.9 bits (89), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 24/86 (27%), Positives = 39/86 (45%), Gaps = 4/86 (4%)
Query: 81 LHFGFPRPIVLRNFKTQNILFNEENVAKWFDFLLSISIPEGETHITTDRVIGTRGYSAPE 140
LH+ R ++ R+ K +N+L + K DF S+ P + + GT Y PE
Sbjct: 127 LHYCHERKVIHRDIKPENLLMGYKGELKIADFGWSVHAPS----LRRRXMCGTLDYLPPE 182
Query: 141 YISICVLNEKSNVFSFGAFLFELLAG 166
I +EK +++ G +E L G
Sbjct: 183 MIEGKTHDEKVDLWCAGVLCYEFLVG 208
>pdb|2VRX|A Chain A, Structure Of Aurora B Kinase In Complex With Zm447439
pdb|2VRX|B Chain B, Structure Of Aurora B Kinase In Complex With Zm447439
Length = 285
Score = 38.9 bits (89), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 24/86 (27%), Positives = 39/86 (45%), Gaps = 4/86 (4%)
Query: 81 LHFGFPRPIVLRNFKTQNILFNEENVAKWFDFLLSISIPEGETHITTDRVIGTRGYSAPE 140
LH+ R ++ R+ K +N+L + K DF S+ P + + GT Y PE
Sbjct: 128 LHYCHERKVIHRDIKPENLLMGYKGELKIADFGWSVHAPS----LRRRXMCGTLDYLPPE 183
Query: 141 YISICVLNEKSNVFSFGAFLFELLAG 166
I +EK +++ G +E L G
Sbjct: 184 MIEGKTHDEKVDLWCAGVLCYEFLVG 209
>pdb|4A4X|A Chain A, Nek2-Ede Bound To Cct248662
Length = 279
Score = 38.9 bits (89), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 23/77 (29%), Positives = 39/77 (50%), Gaps = 2/77 (2%)
Query: 89 IVLRNFKTQNILFNEENVAKWFDFLLSISIPEGETHITTDRVIGTRGYSAPEYISICVLN 148
++ R+ K N+ + + K DF L+ + E +GT Y +PE ++ N
Sbjct: 137 VLHRDLKPANVFLDGKQNVKLGDFGLARILNHDEDF--AKEFVGTPYYMSPEQMNRMSYN 194
Query: 149 EKSNVFSFGAFLFELLA 165
EKS+++S G L+EL A
Sbjct: 195 EKSDIWSLGCLLYELCA 211
>pdb|2HEN|A Chain A, Crystal Structure Of The Ephb2 Receptor Kinase Domain In
Complex With Adp
pdb|2HEN|B Chain B, Crystal Structure Of The Ephb2 Receptor Kinase Domain In
Complex With Adp
pdb|2HEN|C Chain C, Crystal Structure Of The Ephb2 Receptor Kinase Domain In
Complex With Adp
pdb|2HEN|D Chain D, Crystal Structure Of The Ephb2 Receptor Kinase Domain In
Complex With Adp
Length = 286
Score = 38.9 bits (89), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 43/153 (28%), Positives = 66/153 (43%), Gaps = 29/153 (18%)
Query: 90 VLRNFKTQNILFNEENVAKWFDFLLSISIPEGETHITTDRVIGTR---GYSAPEYISICV 146
V R +NIL N V K DF LS + + + T +G + ++APE I
Sbjct: 131 VHRALAARNILVNSNLVCKVSDFGLSRFLEDDTSDPTYTSALGGKIPIRWTAPEAIQYRK 190
Query: 147 LNEKSNVFSFGAFLFELLA-GRIHIWDLLKDTHDHGCFFNEYLKNYLE-DKRFTGIPAPI 204
S+V+S+G ++E+++ G WD+ N+ + N +E D R +P P+
Sbjct: 191 FTSASDVWSYGIVMWEVMSYGERPYWDMT----------NQDVINAIEQDYR---LPPPM 237
Query: 205 IVQDIPCIEKEQQLHASAQLTLECVNNSPEDRP 237
D P LH QL L+C RP
Sbjct: 238 ---DCPS-----ALH---QLMLDCWQKDRNHRP 259
>pdb|3MH2|A Chain A, Mutagenesis Of P38 Map Kinase Establishes Key Roles Of
Phe169 In Function And Structural Dynamics And Reveals A
Novel Dfg-Out State
pdb|3O8U|A Chain A, Conformational Plasticity Of P38 Map Kinase Dfg Motif
Mutants In Response To Inhibitor Binding
Length = 360
Score = 38.9 bits (89), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 30/98 (30%), Positives = 45/98 (45%), Gaps = 15/98 (15%)
Query: 74 IVNSLAYLHFGFPRPIVLRNFKTQNILFNEENVAKWFDFLLSISIPEGETHITTDRVIG- 132
I+ L Y+H I+ R+ K N+ NE+ K D+ G T D + G
Sbjct: 134 ILRGLKYIHSA---DIIHRDLKPSNLAVNEDCELKILDY--------GLARHTDDEMTGY 182
Query: 133 --TRGYSAPE-YISICVLNEKSNVFSFGAFLFELLAGR 167
TR Y APE ++ N+ +++S G + ELL GR
Sbjct: 183 VATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGR 220
>pdb|3QQU|A Chain A, Cocrystal Structure Of Unphosphorylated Igf With
Pyrimidine 8
pdb|3QQU|B Chain B, Cocrystal Structure Of Unphosphorylated Igf With
Pyrimidine 8
pdb|3QQU|C Chain C, Cocrystal Structure Of Unphosphorylated Igf With
Pyrimidine 8
pdb|3QQU|D Chain D, Cocrystal Structure Of Unphosphorylated Igf With
Pyrimidine 8
Length = 301
Score = 38.9 bits (89), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 34/162 (20%), Positives = 73/162 (45%), Gaps = 19/162 (11%)
Query: 17 INNITYAAQMSHNHILKRIGCCLQTPIPILVFQSVEYGTLRDCIFG-----------APL 65
+N + + + +H+++ +G Q +++ + + G L+ + AP
Sbjct: 63 LNEASVMKEFNCHHVVRLLGVVSQGQPTLVIMELMTRGDLKSYLRSLRPEMENNPVLAP- 121
Query: 66 PRL----KIASDIVNSLAYLHFGFPRPIVLRNFKTQNILFNEENVAKWFDFLLSISIPEG 121
P L ++A +I + +AYL+ V R+ +N + E+ K DF ++ I E
Sbjct: 122 PSLSKMIQMAGEIADGMAYLN---ANKFVHRDLAARNCMVAEDFTVKIGDFGMTRDIYET 178
Query: 122 ETHITTDRVIGTRGYSAPEYISICVLNEKSNVFSFGAFLFEL 163
+ + + + + +PE + V S+V+SFG L+E+
Sbjct: 179 DYYRKGGKGLLPVRWMSPESLKDGVFTTYSDVWSFGVVLWEI 220
>pdb|1JQH|A Chain A, Igf-1 Receptor Kinase Domain
pdb|1JQH|B Chain B, Igf-1 Receptor Kinase Domain
pdb|1JQH|C Chain C, Igf-1 Receptor Kinase Domain
Length = 308
Score = 38.9 bits (89), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 34/162 (20%), Positives = 73/162 (45%), Gaps = 19/162 (11%)
Query: 17 INNITYAAQMSHNHILKRIGCCLQTPIPILVFQSVEYGTLRDCIFG-----------APL 65
+N + + + +H+++ +G Q +++ + + G L+ + AP
Sbjct: 70 LNEASVMKEFNCHHVVRLLGVVSQGQPTLVIMELMTRGDLKSYLRSLRPEMENNPVLAP- 128
Query: 66 PRL----KIASDIVNSLAYLHFGFPRPIVLRNFKTQNILFNEENVAKWFDFLLSISIPEG 121
P L ++A +I + +AYL+ V R+ +N + E+ K DF ++ I E
Sbjct: 129 PSLSKMIQMAGEIADGMAYLN---ANKFVHRDLAARNCMVAEDFTVKIGDFGMTRDIYET 185
Query: 122 ETHITTDRVIGTRGYSAPEYISICVLNEKSNVFSFGAFLFEL 163
+ + + + + +PE + V S+V+SFG L+E+
Sbjct: 186 DYYRKGGKGLLPVRWMSPESLKDGVFTTYSDVWSFGVVLWEI 227
>pdb|3LIJ|A Chain A, Crystal Structure Of Full Length Cpcdpk3 (Cgd5_820) In
Complex With Ca2+ And Amppnp
Length = 494
Score = 38.9 bits (89), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 33/100 (33%), Positives = 48/100 (48%), Gaps = 10/100 (10%)
Query: 70 IASDIVNSLAYLHFGFPRPIVLRNFKTQNILFN---EENVAKWFDFLLSISIPEGETHIT 126
I +++ + YLH IV R+ K +N+L ++ + K DF LS E
Sbjct: 141 IIKQVLSGVTYLH---KHNIVHRDLKPENLLLESKEKDALIKIVDFGLSAVF---ENQKK 194
Query: 127 TDRVIGTRGYSAPEYISICVLNEKSNVFSFGAFLFELLAG 166
+GT Y APE + +EK +V+S G LF LLAG
Sbjct: 195 MKERLGTAYYIAPEVLR-KKYDEKCDVWSIGVILFILLAG 233
>pdb|3UIU|A Chain A, Crystal Structure Of Apo-Pkr Kinase Domain
pdb|3UIU|B Chain B, Crystal Structure Of Apo-Pkr Kinase Domain
Length = 306
Score = 38.9 bits (89), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 39/166 (23%), Positives = 65/166 (39%), Gaps = 18/166 (10%)
Query: 5 GHEYHRHTYGSCINNITYAAQMSHNHILKRIGCCLQTPIPILVFQSVEYGTLRDCI---F 61
G +Y T + + Y + S N + C + + + GTL I
Sbjct: 76 GFDYDPETSDDSLESSDYDPENSKNSSRSKTKCLF------IQMEFCDKGTLEQWIEKRR 129
Query: 62 GAPLPR---LKIASDIVNSLAYLHFGFPRPIVLRNFKTQNILFNEENVAKWFDFLLSISI 118
G L + L++ I + Y+H + ++ R+ K NI + K DF L S+
Sbjct: 130 GEKLDKVLALELFEQITKGVDYIH---SKKLIHRDLKPSNIFLVDTKQVKIGDFGLVTSL 186
Query: 119 PEGETHITTDRVIGTRGYSAPEYISICVLNEKSNVFSFGAFLFELL 164
R GT Y +PE IS ++ ++++ G L ELL
Sbjct: 187 KNDGKRT---RSKGTLRYMSPEQISSQDYGKEVDLYALGLILAELL 229
>pdb|3LVP|A Chain A, Crystal Structure Of Bisphosphorylated Igf1-R Kinase
Domain (2p) In Complex With A Bis-Azaindole Inhibitor
pdb|3LVP|B Chain B, Crystal Structure Of Bisphosphorylated Igf1-R Kinase
Domain (2p) In Complex With A Bis-Azaindole Inhibitor
pdb|3LVP|C Chain C, Crystal Structure Of Bisphosphorylated Igf1-R Kinase
Domain (2p) In Complex With A Bis-Azaindole Inhibitor
pdb|3LVP|D Chain D, Crystal Structure Of Bisphosphorylated Igf1-R Kinase
Domain (2p) In Complex With A Bis-Azaindole Inhibitor
Length = 336
Score = 38.9 bits (89), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 34/162 (20%), Positives = 73/162 (45%), Gaps = 19/162 (11%)
Query: 17 INNITYAAQMSHNHILKRIGCCLQTPIPILVFQSVEYGTLRDCIFG-----------APL 65
+N + + + +H+++ +G Q +++ + + G L+ + AP
Sbjct: 98 LNEASVMKEFNCHHVVRLLGVVSQGQPTLVIMELMTRGDLKSYLRSLRPEMENNPVLAP- 156
Query: 66 PRL----KIASDIVNSLAYLHFGFPRPIVLRNFKTQNILFNEENVAKWFDFLLSISIPEG 121
P L ++A +I + +AYL+ V R+ +N + E+ K DF ++ I E
Sbjct: 157 PSLSKMIQMAGEIADGMAYLN---ANKFVHRDLAARNCMVAEDFTVKIGDFGMTRDIYET 213
Query: 122 ETHITTDRVIGTRGYSAPEYISICVLNEKSNVFSFGAFLFEL 163
+ + + + + +PE + V S+V+SFG L+E+
Sbjct: 214 DYYRKGGKGLLPVRWMSPESLKDGVFTTYSDVWSFGVVLWEI 255
>pdb|2QOK|A Chain A, Human Epha3 Kinase And Juxtamembrane Region,
Y596f:y602f:s768a Triple Mutant
Length = 373
Score = 38.9 bits (89), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 54/228 (23%), Positives = 94/228 (41%), Gaps = 47/228 (20%)
Query: 24 AQMSHNHILKRIGCCLQTPIPILVFQSVEYGTL------RDCIFGAPLPRLKIASDIVNS 77
Q H +I++ G ++ ++V + +E G+L D F + + + I +
Sbjct: 101 GQFDHPNIIRLEGVVTKSKPVMIVTEYMENGSLDSFLRKHDAQFTV-IQLVGMLRGIASG 159
Query: 78 LAYLH-FGFPRPIVLRNFKTQNILFNEENVAKWFDFLLSISIPEGETHITTDRVIGTRG- 135
+ YL G+ V R+ +NIL N V K DF L+ + + T TRG
Sbjct: 160 MKYLSDMGY----VHRDLAARNILINSNLVCKVSDFGLARVLEDDPEAAYT-----TRGG 210
Query: 136 -----YSAPEYISICVLNEKSNVFSFGAFLFELLA-GRIHIWDLLKDTHDHGCFFNEYLK 189
+++PE I+ S+V+S+G L+E+++ G W++ + +K
Sbjct: 211 KIPIRWTSPEAIAYRKFTSASDVWSYGIVLWEVMSYGERPYWEMSN---------QDVIK 261
Query: 190 NYLEDKRFTGIPAPIIVQDIPCIEKEQQLHASAQLTLECVNNSPEDRP 237
E R +P P+ D P A QL L+C +RP
Sbjct: 262 AVDEGYR---LPPPM---DCPA--------ALYQLMLDCWQKDRNNRP 295
>pdb|3GP0|A Chain A, Crystal Structure Of Human Mitogen Activated Protein
Kinase 11 (p38 Beta) In Complex With Nilotinib
Length = 348
Score = 38.9 bits (89), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 35/137 (25%), Positives = 59/137 (43%), Gaps = 21/137 (15%)
Query: 74 IVNSLAYLHFGFPRPIVLRNFKTQNILFNEENVAKWFDFLLSISIPEGETHITTDRVIGT 133
++ L Y+H I+ R+ K N+ NE+ + DF L+ E T + T
Sbjct: 132 LLRGLKYIHSA---GIIHRDLKPSNVAVNEDCELRILDFGLARQADEEMTG-----YVAT 183
Query: 134 RGYSAPE-YISICVLNEKSNVFSFGAFLFELLAGRIHIWDLLKDTHDHGCFFNEYLKNYL 192
R Y APE ++ N+ +++S G + ELL G+ G + + LK +
Sbjct: 184 RWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLQGKALF---------PGSDYIDQLKRIM 234
Query: 193 EDKRFTGIPAPIIVQDI 209
E G P+P ++ I
Sbjct: 235 E---VVGTPSPEVLAKI 248
>pdb|2OJ9|A Chain A, Structure Of Igf-1r Kinase Domain Complexed With A
Benzimidazole Inhibitor
pdb|3NW5|A Chain A, Crystal Structure Of Insulin-Like Growth Factor 1 Receptor
(Igf-1r-Wt) Complex With A Carbon-Linked Proline
Isostere Inhibitor (11b)
pdb|3NW6|A Chain A, Crystal Structure Of Insulin-Like Growth Factor 1 Receptor
(Igf-1r-Wt) Complex With A Carbon-Linked Proline
Isostere Inhibitor (11a)
pdb|3NW7|A Chain A, Crystal Structure Of Insulin-Like Growth Factor 1 Receptor
(Igf-1r-Wt) Complex With A Carbon-Linked Proline
Isostere Inhibitor (34)
Length = 307
Score = 38.9 bits (89), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 34/162 (20%), Positives = 73/162 (45%), Gaps = 19/162 (11%)
Query: 17 INNITYAAQMSHNHILKRIGCCLQTPIPILVFQSVEYGTLRDCIFG-----------APL 65
+N + + + +H+++ +G Q +++ + + G L+ + AP
Sbjct: 69 LNEASVMKEFNCHHVVRLLGVVSQGQPTLVIMELMTRGDLKSYLRSLRPEMENNPVLAP- 127
Query: 66 PRL----KIASDIVNSLAYLHFGFPRPIVLRNFKTQNILFNEENVAKWFDFLLSISIPEG 121
P L ++A +I + +AYL+ V R+ +N + E+ K DF ++ I E
Sbjct: 128 PSLSKMIQMAGEIADGMAYLN---ANKFVHRDLAARNCMVAEDFTVKIGDFGMTRDIYET 184
Query: 122 ETHITTDRVIGTRGYSAPEYISICVLNEKSNVFSFGAFLFEL 163
+ + + + + +PE + V S+V+SFG L+E+
Sbjct: 185 DYYRKGGKGLLPVRWMSPESLKDGVFTTYSDVWSFGVVLWEI 226
>pdb|4FL2|A Chain A, Structural And Biophysical Characterization Of The Syk
Activation Switch
Length = 636
Score = 38.9 bits (89), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 36/147 (24%), Positives = 69/147 (46%), Gaps = 11/147 (7%)
Query: 25 QMSHNHILKRIGCCLQTPIPILVFQSVEYGTLRDCIFGAPLPRLKIASDIVNSLAY-LHF 83
Q+ + +I++ IG C + +LV + E G L + + K ++V+ ++ + +
Sbjct: 427 QLDNPYIVRMIGIC-EAESWMLVMEMAELGPLNKYLQQNRHVKDKNIIELVHQVSMGMKY 485
Query: 84 GFPRPIVLRNFKTQNILFNEENVAKWFDFLLSISIPEGETHITTDRVIGTRG-----YSA 138
V R+ +N+L ++ AK DF LS ++ E + T G + A
Sbjct: 486 LEESNFVHRDLAARNVLLVTQHYAKISDFGLSKALRADENYYKAQ----THGKWPVKWYA 541
Query: 139 PEYISICVLNEKSNVFSFGAFLFELLA 165
PE I+ + KS+V+SFG ++E +
Sbjct: 542 PECINYYKFSSKSDVWSFGVLMWEAFS 568
>pdb|3O23|A Chain A, Human Unphosphorylated Igf1-R Kinase Domain In Complex
With An Hydantoin Inhibitor
Length = 305
Score = 38.9 bits (89), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 34/162 (20%), Positives = 73/162 (45%), Gaps = 19/162 (11%)
Query: 17 INNITYAAQMSHNHILKRIGCCLQTPIPILVFQSVEYGTLRDCIFG-----------APL 65
+N + + + +H+++ +G Q +++ + + G L+ + AP
Sbjct: 67 LNEASVMKEFNCHHVVRLLGVVSQGQPTLVIMELMTRGDLKSYLRSLRPEMENNPVLAP- 125
Query: 66 PRL----KIASDIVNSLAYLHFGFPRPIVLRNFKTQNILFNEENVAKWFDFLLSISIPEG 121
P L ++A +I + +AYL+ V R+ +N + E+ K DF ++ I E
Sbjct: 126 PSLSKMIQMAGEIADGMAYLN---ANKFVHRDLAARNCMVAEDFTVKIGDFGMTRDIYET 182
Query: 122 ETHITTDRVIGTRGYSAPEYISICVLNEKSNVFSFGAFLFEL 163
+ + + + + +PE + V S+V+SFG L+E+
Sbjct: 183 DYYRKGGKGLLPVRWMSPESLKDGVFTTYSDVWSFGVVLWEI 224
>pdb|4EXU|A Chain A, Mapk13, Inactive Form
pdb|4EYJ|A Chain A, Mapk13 Complex With Inhibitor
pdb|4EYM|A Chain A, Mapk13 Complex With Inhibitor
Length = 371
Score = 38.9 bits (89), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 40/151 (26%), Positives = 62/151 (41%), Gaps = 18/151 (11%)
Query: 60 IFGAPLPRLKIASDIVNSLAYLHFGFPRPIVLRNFKTQNILFNEENVAKWFDFLLSISIP 119
I G KI + L L + +V R+ K N+ NE+ K DF L+
Sbjct: 136 IMGMEFSEEKIQYLVYQMLKGLKYIHSAGVVHRDLKPGNLAVNEDCELKILDFGLA---R 192
Query: 120 EGETHITTDRVIGTRGYSAPEYI-SICVLNEKSNVFSFGAFLFELLAGRIHIWDLLKDTH 178
+ +T + TR Y APE I S N+ +++S G + E+L G+ L K
Sbjct: 193 HADAEMTG--YVVTRWYRAPEVILSWMHYNQTVDIWSVGCIMAEMLTGKT----LFKG-- 244
Query: 179 DHGCFFNEYLKNYLEDKRFTGIPAPIIVQDI 209
+YL + + TG+P VQ +
Sbjct: 245 ------KDYLDQLTQILKVTGVPGTEFVQKL 269
>pdb|3SRV|A Chain A, Crystal Structure Of Spleen Tyrosine Kinase (Syk) In
Complex With A Diaminopyrimidine Carboxamide Inhibitor
Length = 277
Score = 38.5 bits (88), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 36/147 (24%), Positives = 68/147 (46%), Gaps = 11/147 (7%)
Query: 25 QMSHNHILKRIGCCLQTPIPILVFQSVEYGTLRDCIFGAPLPRLKIASDIVNSLAY-LHF 83
Q+ + +I++ IG C + +LV + E G L + + K ++V+ ++ + +
Sbjct: 68 QLDNPYIVRMIGIC-EAESWMLVMEMAELGPLNKYLQQNRHVKDKNIIELVHQVSMGMKY 126
Query: 84 GFPRPIVLRNFKTQNILFNEENVAKWFDFLLSISIPEGETHITTDRVIGTRG-----YSA 138
V R+ +N+L ++ AK DF LS ++ E T G + A
Sbjct: 127 LEESNFVHRDLAARNVLLVTQHYAKISDFGLSKALRADENXYKAQ----THGKWPVKWYA 182
Query: 139 PEYISICVLNEKSNVFSFGAFLFELLA 165
PE I+ + KS+V+SFG ++E +
Sbjct: 183 PECINYYKFSSKSDVWSFGVLMWEAFS 209
>pdb|1M7N|A Chain A, Crystal Structure Of Unactivated Apo Insulin-Like Growth
Factor-1 Receptor Kinase Domain
pdb|1M7N|B Chain B, Crystal Structure Of Unactivated Apo Insulin-Like Growth
Factor-1 Receptor Kinase Domain
Length = 322
Score = 38.5 bits (88), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 34/162 (20%), Positives = 73/162 (45%), Gaps = 19/162 (11%)
Query: 17 INNITYAAQMSHNHILKRIGCCLQTPIPILVFQSVEYGTLRDCIFG-----------APL 65
+N + + + +H+++ +G Q +++ + + G L+ + AP
Sbjct: 76 LNEASVMKEFNCHHVVRLLGVVSQGQPTLVIMELMTRGDLKSYLRSLRPEMENNPVLAP- 134
Query: 66 PRL----KIASDIVNSLAYLHFGFPRPIVLRNFKTQNILFNEENVAKWFDFLLSISIPEG 121
P L ++A +I + +AYL+ V R+ +N + E+ K DF ++ I E
Sbjct: 135 PSLSKMIQMAGEIADGMAYLN---ANKFVHRDLAARNCMVAEDFTVKIGDFGMTRDIYET 191
Query: 122 ETHITTDRVIGTRGYSAPEYISICVLNEKSNVFSFGAFLFEL 163
+ + + + + +PE + V S+V+SFG L+E+
Sbjct: 192 DYYRKGGKGLLPVRWMSPESLKDGVFTTYSDVWSFGVVLWEI 233
>pdb|3COI|A Chain A, Crystal Structure Of P38delta Kinase
Length = 353
Score = 38.5 bits (88), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 40/151 (26%), Positives = 62/151 (41%), Gaps = 18/151 (11%)
Query: 60 IFGAPLPRLKIASDIVNSLAYLHFGFPRPIVLRNFKTQNILFNEENVAKWFDFLLSISIP 119
I G KI + L L + +V R+ K N+ NE+ K DF L+
Sbjct: 118 IMGLKFSEEKIQYLVYQMLKGLKYIHSAGVVHRDLKPGNLAVNEDCELKILDFGLA---R 174
Query: 120 EGETHITTDRVIGTRGYSAPEYI-SICVLNEKSNVFSFGAFLFELLAGRIHIWDLLKDTH 178
+ +T + TR Y APE I S N+ +++S G + E+L G+ L K
Sbjct: 175 HADAEMTG--YVVTRWYRAPEVILSWMHYNQTVDIWSVGCIMAEMLTGKT----LFKG-- 226
Query: 179 DHGCFFNEYLKNYLEDKRFTGIPAPIIVQDI 209
+YL + + TG+P VQ +
Sbjct: 227 ------KDYLDQLTQILKVTGVPGTEFVQKL 251
>pdb|4FL3|A Chain A, Structural And Biophysical Characterization Of The Syk
Activation Switch
Length = 635
Score = 38.5 bits (88), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 36/147 (24%), Positives = 69/147 (46%), Gaps = 11/147 (7%)
Query: 25 QMSHNHILKRIGCCLQTPIPILVFQSVEYGTLRDCIFGAPLPRLKIASDIVNSLAY-LHF 83
Q+ + +I++ IG C + +LV + E G L + + K ++V+ ++ + +
Sbjct: 426 QLDNPYIVRMIGIC-EAESWMLVMEMAELGPLNKYLQQNRHVKDKNIIELVHQVSMGMKY 484
Query: 84 GFPRPIVLRNFKTQNILFNEENVAKWFDFLLSISIPEGETHITTDRVIGTRG-----YSA 138
V R+ +N+L ++ AK DF LS ++ E + T G + A
Sbjct: 485 LEESNFVHRDLAARNVLLVTQHYAKISDFGLSKALRADENYYKAQ----THGKWPVKWYA 540
Query: 139 PEYISICVLNEKSNVFSFGAFLFELLA 165
PE I+ + KS+V+SFG ++E +
Sbjct: 541 PECINYYKFSSKSDVWSFGVLMWEAFS 567
>pdb|3I81|A Chain A, Crystal Structure Of Insulin-Like Growth Factor 1 Receptor
(Igf-1r-Wt) Complex With Bms-754807
[1-(4-((5-Cyclopropyl-
1h-Pyrazol-3-Yl)amino)pyrrolo[2,1-F][1,2,
4]triazin-2-Yl)-N-
(6-Fluoro-3-Pyridinyl)-2-Methyl-L-Prolinamide]
Length = 315
Score = 38.5 bits (88), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 34/162 (20%), Positives = 73/162 (45%), Gaps = 19/162 (11%)
Query: 17 INNITYAAQMSHNHILKRIGCCLQTPIPILVFQSVEYGTLRDCIFG-----------APL 65
+N + + + +H+++ +G Q +++ + + G L+ + AP
Sbjct: 69 LNEASVMKEFNCHHVVRLLGVVSQGQPTLVIMELMTRGDLKSYLRSLRPEMENNPVLAP- 127
Query: 66 PRL----KIASDIVNSLAYLHFGFPRPIVLRNFKTQNILFNEENVAKWFDFLLSISIPEG 121
P L ++A +I + +AYL+ V R+ +N + E+ K DF ++ I E
Sbjct: 128 PSLSKMIQMAGEIADGMAYLN---ANKFVHRDLAARNCMVAEDFTVKIGDFGMTRDIYET 184
Query: 122 ETHITTDRVIGTRGYSAPEYISICVLNEKSNVFSFGAFLFEL 163
+ + + + + +PE + V S+V+SFG L+E+
Sbjct: 185 DYYRKGGKGLLPVRWMSPESLKDGVFTTYSDVWSFGVVLWEI 226
>pdb|4FVP|A Chain A, Crystal Structure Of The Jak2 Pseudokinase Domain (Apo
Form)
pdb|4FVQ|A Chain A, Crystal Structure Of The Jak2 Pseudokinase Domain
(Mg-Atp-Bound Form)
Length = 289
Score = 38.5 bits (88), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 42/168 (25%), Positives = 78/168 (46%), Gaps = 15/168 (8%)
Query: 9 HRHTYGSCINNITYAAQMSHNHILKRIGCCLQTPIPILVFQSVEYGTL-------RDCIF 61
HR+ S + +++SH H++ G C+ ILV + V++G+L ++CI
Sbjct: 52 HRNYSESFFEAASMMSKLSHKHLVLNYGVCVCGDENILVQEFVKFGSLDTYLKKNKNCI- 110
Query: 62 GAPLPRLKIASDIVNSLAYLHFGFPRPIVLRNFKTQNILF-NEENVAKWFDFLLSISIPE 120
L +L++A + A +HF ++ N +NIL EE+ + +S P
Sbjct: 111 -NILWKLEVAKQLA---AAMHFLEENTLIHGNVCAKNILLIREEDRKTGNPPFIKLSDPG 166
Query: 121 GETHITTDRVIGTR-GYSAPEYI-SICVLNEKSNVFSFGAFLFELLAG 166
+ ++ R + PE I + LN ++ +SFG L+E+ +G
Sbjct: 167 ISITVLPKDILQERIPWVPPECIENPKNLNLATDKWSFGTTLWEICSG 214
>pdb|2QOL|A Chain A, Human Epha3 Kinase And Juxtamembrane Region,
Y596:y602:s768g Triple Mutant
Length = 373
Score = 38.5 bits (88), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 54/228 (23%), Positives = 93/228 (40%), Gaps = 47/228 (20%)
Query: 24 AQMSHNHILKRIGCCLQTPIPILVFQSVEYGTL------RDCIFGAPLPRLKIASDIVNS 77
Q H +I++ G ++ ++V + +E G+L D F + + + I +
Sbjct: 101 GQFDHPNIIRLEGVVTKSKPVMIVTEYMENGSLDSFLRKHDAQFTV-IQLVGMLRGIASG 159
Query: 78 LAYLH-FGFPRPIVLRNFKTQNILFNEENVAKWFDFLLSISIPEGETHITTDRVIGTRG- 135
+ YL G+ V R+ +NIL N V K DF L + + T TRG
Sbjct: 160 MKYLSDMGY----VHRDLAARNILINSNLVCKVSDFGLGRVLEDDPEAAYT-----TRGG 210
Query: 136 -----YSAPEYISICVLNEKSNVFSFGAFLFELLA-GRIHIWDLLKDTHDHGCFFNEYLK 189
+++PE I+ S+V+S+G L+E+++ G W++ + +K
Sbjct: 211 KIPIRWTSPEAIAYRKFTSASDVWSYGIVLWEVMSYGERPYWEMSN---------QDVIK 261
Query: 190 NYLEDKRFTGIPAPIIVQDIPCIEKEQQLHASAQLTLECVNNSPEDRP 237
E R +P P+ D P A QL L+C +RP
Sbjct: 262 AVDEGYR---LPPPM---DCPA--------ALYQLMLDCWQKDRNNRP 295
>pdb|4F1M|A Chain A, Crystal Structure Of The G1179s Roco4 Kinase Domain Bound
To Appcp From D. Discoideum
Length = 287
Score = 38.1 bits (87), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 43/155 (27%), Positives = 71/155 (45%), Gaps = 20/155 (12%)
Query: 24 AQMSHNHILKRIGCCLQTPIPILVFQSVEYGTLRDCIFGAPLP-----RLKIASDIVNSL 78
+ ++H +I+K G + P P +V + V G L + P +L++ DI +
Sbjct: 78 SNLNHPNIVKLYGL-MHNP-PRMVMEFVPCGDLYHRLLDKAHPIKWSVKLRLMLDIALGI 135
Query: 79 AYLHFGFPRPIVLRNFKTQNILFN--EENV---AKWFDFLLSISIPEGETHITTDRVIGT 133
Y+ P PIV R+ ++ NI +EN AK DF LS + H + ++G
Sbjct: 136 EYMQNQNP-PIVHRDLRSPNIFLQSLDENAPVCAKVADFSLS----QQSVH-SVSGLLGN 189
Query: 134 RGYSAPEYISIC--VLNEKSNVFSFGAFLFELLAG 166
+ APE I EK++ +SF L+ +L G
Sbjct: 190 FQWMAPETIGAEEESYTEKADTYSFAMILYTILTG 224
>pdb|2JAM|A Chain A, Crystal Structure Of Human Calmodulin-Dependent Protein
Kinase I G
pdb|2JAM|B Chain B, Crystal Structure Of Human Calmodulin-Dependent Protein
Kinase I G
Length = 304
Score = 38.1 bits (87), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 46/160 (28%), Positives = 69/160 (43%), Gaps = 14/160 (8%)
Query: 14 GSCINNITYAAQMSHNHILKRIGCCLQTPIPILVFQSVEYGTLRDCIFGAPLPRLKIAS- 72
S N I ++ H +I+ T LV Q V G L D I + K AS
Sbjct: 51 SSLENEIAVLKKIKHENIVTLEDIYESTTHYYLVMQLVSGGELFDRILERGVYTEKDASL 110
Query: 73 ---DIVNSLAYLHFGFPRPIVLRNFKTQNILF--NEENVAKWF-DFLLSISIPEGETHIT 126
+++++ YLH IV R+ K +N+L+ EEN DF LS + E +
Sbjct: 111 VIQQVLSAVKYLH---ENGIVHRDLKPENLLYLTPEENSKIMITDFGLS----KMEQNGI 163
Query: 127 TDRVIGTRGYSAPEYISICVLNEKSNVFSFGAFLFELLAG 166
GT GY APE ++ ++ + +S G + LL G
Sbjct: 164 MSTACGTPGYVAPEVLAQKPYSKAVDCWSIGVITYILLCG 203
>pdb|2A19|B Chain B, Pkr Kinase Domain- Eif2alpha- Amp-Pnp Complex.
pdb|2A19|C Chain C, Pkr Kinase Domain- Eif2alpha- Amp-Pnp Complex.
pdb|2A1A|B Chain B, Pkr Kinase Domain-Eif2alpha Complex
Length = 284
Score = 38.1 bits (87), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 54/231 (23%), Positives = 85/231 (36%), Gaps = 45/231 (19%)
Query: 13 YGSCINNITYAAQMSHNHILKRIGCCLQTPIPILVFQSVEYGTLRDCI---FGAPLPR-- 67
Y C + Y + S + + CL + + + GTL I G L +
Sbjct: 69 YNGCWDGFDYDPETSSKNSSRSKTKCL-----FIQMEFCDKGTLEQWIEKRRGEKLDKVL 123
Query: 68 -LKIASDIVNSLAYLHFGFPRPIVLRNFKTQNILFNEENVAKWFDFLLSISIPEGETHIT 126
L++ I + Y+H + ++ R+ K NI + K DF L S+
Sbjct: 124 ALELFEQITKGVDYIH---SKKLINRDLKPSNIFLVDTKQVKIGDFGLVTSLKNDGKRX- 179
Query: 127 TDRVIGTRGYSAPEYISICVLNEKSNVFSFGAFLFELLAGRIHIWDLLKDTHDHGCFFNE 186
R GT Y +PE IS ++ ++++ G L ELL H+ D +T
Sbjct: 180 --RSKGTLRYMSPEQISSQDYGKEVDLYALGLILAELL----HVCDTAFETS-------- 225
Query: 187 YLKNYLEDKRFTGIPAPIIVQDIPCIEKEQQLHASAQLTLECVNNSPEDRP 237
K FT + II EK L + ++ PEDRP
Sbjct: 226 --------KFFTDLRDGIISDIFDKKEK--------TLLQKLLSKKPEDRP 260
>pdb|2X7F|A Chain A, Crystal Structure Of The Kinase Domain Of Human Traf2- And
Nck-Interacting Kinase With Wee1chk1 Inhibitor
pdb|2X7F|B Chain B, Crystal Structure Of The Kinase Domain Of Human Traf2- And
Nck-Interacting Kinase With Wee1chk1 Inhibitor
pdb|2X7F|C Chain C, Crystal Structure Of The Kinase Domain Of Human Traf2- And
Nck-Interacting Kinase With Wee1chk1 Inhibitor
pdb|2X7F|D Chain D, Crystal Structure Of The Kinase Domain Of Human Traf2- And
Nck-Interacting Kinase With Wee1chk1 Inhibitor
pdb|2X7F|E Chain E, Crystal Structure Of The Kinase Domain Of Human Traf2- And
Nck-Interacting Kinase With Wee1chk1 Inhibitor
Length = 326
Score = 38.1 bits (87), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 38/133 (28%), Positives = 58/133 (43%), Gaps = 18/133 (13%)
Query: 46 LVFQSVEYGTLRDCIFGAPLPRLK------IASDIVNSLAYLHFGFPRPIVLRNFKTQNI 99
LV + G++ D I LK I +I+ L++LH ++ R+ K QN+
Sbjct: 104 LVMEFCGAGSVTDLIKNTKGNTLKEEWIAYICREILRGLSHLH---QHKVIHRDIKGQNV 160
Query: 100 LFNEENVAKWFDFLLSISIPEGETHITTDRVIGTRGYSAPEYISICVLNE------KSNV 153
L E K DF +S + T + IGT + APE I+ C N KS++
Sbjct: 161 LLTENAEVKLVDFGVSAQL--DRTVGRRNTFIGTPYWMAPEVIA-CDENPDATYDFKSDL 217
Query: 154 FSFGAFLFELLAG 166
+S G E+ G
Sbjct: 218 WSLGITAIEMAEG 230
>pdb|3KN5|A Chain A, Crystal Structure Of The C-Terminal Kinase Domain Of Msk1
In With Amp-Pnp
pdb|3KN5|B Chain B, Crystal Structure Of The C-Terminal Kinase Domain Of Msk1
In With Amp-Pnp
pdb|3KN6|A Chain A, Crystal Structure Of The C-Terminal Kinase Domain Of Msk1
pdb|3KN6|B Chain B, Crystal Structure Of The C-Terminal Kinase Domain Of Msk1
Length = 325
Score = 37.7 bits (86), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 27/102 (26%), Positives = 53/102 (51%), Gaps = 8/102 (7%)
Query: 70 IASDIVNSLAYLHFGFPRPIVLRNFKTQNILFNEEN---VAKWFDFLLSISIPEGETHIT 126
I +V++++++H +V R+ K +N+LF +EN K DF + P +
Sbjct: 111 IMRKLVSAVSHMH---DVGVVHRDLKPENLLFTDENDNLEIKIIDFGFARLKPPDNQPLK 167
Query: 127 TDRVIGTRGYSAPEYISICVLNEKSNVFSFGAFLFELLAGRI 168
T T Y+APE ++ +E +++S G L+ +L+G++
Sbjct: 168 TP--CFTLHYAAPELLNQNGYDESCDLWSLGVILYTMLSGQV 207
>pdb|4F0F|A Chain A, Crystal Structure Of The Roco4 Kinase Domain Bound To
Appcp From D. Discoideum
pdb|4F0G|A Chain A, Crystal Structure Of The Roco4 Kinase Domain From D.
Discoideum
pdb|4F1T|A Chain A, Crystal Structure Of The Roco4 Kinase Domain From D.
Discoideum Bound To The Rock Inhibitor H1152
Length = 287
Score = 37.7 bits (86), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 43/155 (27%), Positives = 71/155 (45%), Gaps = 20/155 (12%)
Query: 24 AQMSHNHILKRIGCCLQTPIPILVFQSVEYGTLRDCIFGAPLP-----RLKIASDIVNSL 78
+ ++H +I+K G + P P +V + V G L + P +L++ DI +
Sbjct: 78 SNLNHPNIVKLYGL-MHNP-PRMVMEFVPCGDLYHRLLDKAHPIKWSVKLRLMLDIALGI 135
Query: 79 AYLHFGFPRPIVLRNFKTQNILFN--EENV---AKWFDFLLSISIPEGETHITTDRVIGT 133
Y+ P PIV R+ ++ NI +EN AK DF LS + H + ++G
Sbjct: 136 EYMQNQNP-PIVHRDLRSPNIFLQSLDENAPVCAKVADFGLS----QQSVH-SVSGLLGN 189
Query: 134 RGYSAPEYISIC--VLNEKSNVFSFGAFLFELLAG 166
+ APE I EK++ +SF L+ +L G
Sbjct: 190 FQWMAPETIGAEEESYTEKADTYSFAMILYTILTG 224
>pdb|2R2P|A Chain A, Kinase Domain Of Human Ephrin Type-A Receptor 5 (Epha5)
Length = 295
Score = 37.7 bits (86), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 56/232 (24%), Positives = 95/232 (40%), Gaps = 41/232 (17%)
Query: 17 INNITYAAQMSHNHILKRIGCCLQTPIPILVFQSVEYGTL------RDCIFGAPLPRLKI 70
+ + Q H +I+ G ++ ++V + +E G+L D F + + +
Sbjct: 71 LGEASIMGQFDHPNIIHLEGVVTKSKPVMIVTEYMENGSLDTFLKKNDGQFTV-IQLVGM 129
Query: 71 ASDIVNSLAYLH-FGFPRPIVLRNFKTQNILFNEENVAKWFDFLLSISI---PEGETHIT 126
I + YL G+ V R+ +NIL N V K DF LS + PE + T
Sbjct: 130 LRGISAGMKYLSDMGY----VHRDLAARNILINSNLVCKVSDFGLSRVLEDDPEA-AYTT 184
Query: 127 TDRVIGTRGYSAPEYISICVLNEKSNVFSFGAFLFELLA-GRIHIWDLLKDTHDHGCFFN 185
I R ++APE I+ S+V+S+G ++E+++ G W++
Sbjct: 185 RGGKIPIR-WTAPEAIAFRKFTSASDVWSYGIVMWEVVSYGERPYWEMTN---------Q 234
Query: 186 EYLKNYLEDKRFTGIPAPIIVQDIPCIEKEQQLHASAQLTLECVNNSPEDRP 237
+ +K E R +P+P+ D P A QL L+C RP
Sbjct: 235 DVIKAVEEGYR---LPSPM---DCPA--------ALYQLMLDCWQKERNSRP 272
>pdb|3MFR|A Chain A, Cask-4m Cam Kinase Domain, Native
pdb|3MFS|A Chain A, Cask-4m Cam Kinase Domain, Amppnp
pdb|3MFT|A Chain A, Cask-4m Cam Kinase Domain, Mn2+
pdb|3MFU|A Chain A, Cask-4m Cam Kinase Domain, Amppnp-Mn2+
Length = 351
Score = 37.7 bits (86), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 30/96 (31%), Positives = 50/96 (52%), Gaps = 8/96 (8%)
Query: 74 IVNSLAYLHFGFPRPIVLRNFKTQNILF-NEENVA--KWFDFLLSISIPEGETHITTDRV 130
I+ +L Y H I+ R+ K +N+L ++EN A K DF ++I + GE+ +
Sbjct: 139 ILEALRYCH---DNNIIHRDVKPENVLLASKENSAPVKLGDFGVAIQL--GESGLVAGGR 193
Query: 131 IGTRGYSAPEYISICVLNEKSNVFSFGAFLFELLAG 166
+GT + APE + + +V+ G LF LL+G
Sbjct: 194 VGTPHFMAPEVVKREPYGKPVDVWGCGVILFILLSG 229
>pdb|2WEI|A Chain A, Crystal Structure Of The Kinase Domain Of Cryptosporidium
Parvum Calcium Dependent Protein Kinase In Complex With
3- Mb-Pp1
Length = 287
Score = 37.7 bits (86), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 33/101 (32%), Positives = 48/101 (47%), Gaps = 10/101 (9%)
Query: 69 KIASDIVNSLAYLHFGFPRPIVLRNFKTQNILFNEENVA---KWFDFLLSISIPEGETHI 125
+I + + + Y+H IV R+ K +NIL + K DF LS +
Sbjct: 125 RIIKQVFSGITYMH---KHNIVHRDLKPENILLESKEKDCDIKIIDFGLSTCFQQNTK-- 179
Query: 126 TTDRVIGTRGYSAPEYISICVLNEKSNVFSFGAFLFELLAG 166
DR IGT Y APE + +EK +V+S G L+ LL+G
Sbjct: 180 MKDR-IGTAYYIAPEVLR-GTYDEKCDVWSAGVILYILLSG 218
>pdb|3DFA|A Chain A, Crystal Structure Of Kinase Domain Of Calcium-dependent
Protein Kinase Cgd3_920 From Cryptosporidium Parvum
Length = 286
Score = 37.7 bits (86), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 33/101 (32%), Positives = 48/101 (47%), Gaps = 10/101 (9%)
Query: 69 KIASDIVNSLAYLHFGFPRPIVLRNFKTQNILFNEENVA---KWFDFLLSISIPEGETHI 125
+I + + + Y+H IV R+ K +NIL + K DF LS +
Sbjct: 125 RIIKQVFSGITYMH---KHNIVHRDLKPENILLESKEKDCDIKIIDFGLSTCFQQNTK-- 179
Query: 126 TTDRVIGTRGYSAPEYISICVLNEKSNVFSFGAFLFELLAG 166
DR IGT Y APE + +EK +V+S G L+ LL+G
Sbjct: 180 MKDR-IGTAYYIAPEVLR-GTYDEKCDVWSAGVILYILLSG 218
>pdb|1FVR|A Chain A, Tie2 Kinase Domain
pdb|1FVR|B Chain B, Tie2 Kinase Domain
Length = 327
Score = 37.7 bits (86), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 37/157 (23%), Positives = 66/157 (42%), Gaps = 24/157 (15%)
Query: 28 HNHILKRIGCCLQTPIPILVFQSVEYGTLRDCIFGAPL----PRLKIASDIVNSLA---Y 80
H +I+ +G C L + +G L D + + + P IA+ ++L+
Sbjct: 85 HPNIINLLGACEHRGYLYLAIEYAPHGNLLDFLRKSRVLETDPAFAIANSTASTLSSQQL 144
Query: 81 LHFGF----------PRPIVLRNFKTQNILFNEENVAKWFDFLLSISIPEGETHITTDRV 130
LHF + + R+ +NIL E VAK DF LS + +
Sbjct: 145 LHFAADVARGMDYLSQKQFIHRDLAARNILVGENYVAKIADFGLSRG-----QEVYVKKT 199
Query: 131 IGTR--GYSAPEYISICVLNEKSNVFSFGAFLFELLA 165
+G + A E ++ V S+V+S+G L+E+++
Sbjct: 200 MGRLPVRWMAIESLNYSVYTTNSDVWSYGVLLWEIVS 236
>pdb|3MH3|A Chain A, Mutagenesis Of P38 Map Kinase Establishes Key Roles Of
Phe169 In Function And Structural Dynamics And Reveals A
Novel Dfg-Out State
pdb|3OBJ|A Chain A, Conformational Plasticity Of P38 Map Kinase Dfg Mutants In
Response To Inhibitor Binding
Length = 360
Score = 37.7 bits (86), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 30/98 (30%), Positives = 44/98 (44%), Gaps = 15/98 (15%)
Query: 74 IVNSLAYLHFGFPRPIVLRNFKTQNILFNEENVAKWFDFLLSISIPEGETHITTDRVIG- 132
I+ L Y+H I+ R+ K N+ NE+ K D G T D + G
Sbjct: 134 ILRGLKYIHSA---DIIHRDLKPSNLAVNEDCELKILD--------RGLARHTDDEMTGY 182
Query: 133 --TRGYSAPE-YISICVLNEKSNVFSFGAFLFELLAGR 167
TR Y APE ++ N+ +++S G + ELL GR
Sbjct: 183 VATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGR 220
>pdb|2X4Z|A Chain A, Crystal Structure Of The Human P21-Activated Kinase 4 In
Complex With Pf-03758309
pdb|4APP|A Chain A, Crystal Structure Of The Human P21-Activated Kinase 4 In
Complex With (S)-N-(5-(3-Benzyl-1-Methylpiperazine-4-
Carbonyl)-6,6-Dimethyl-1,4,5,6-Tetrahydropyrrolo(3,4-C)
Pyrazol-3-Yl)-3-Phenoxybenzamide
Length = 296
Score = 37.7 bits (86), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 29/125 (23%), Positives = 57/125 (45%), Gaps = 10/125 (8%)
Query: 46 LVFQSVEYGTLRDCIFGAPLPRLKIASDIVNSLAYLHFGFPRPIVLRNFKTQNILFNEEN 105
+V + +E G L D + + +IA+ + L L + ++ R+ K+ +IL +
Sbjct: 98 VVMEFLEGGALTDIVTHTRMNEEQIAAVCLAVLQALSVLHAQGVIHRDIKSDSILLTHDG 157
Query: 106 VAKWFDF----LLSISIPEGETHITTDRVIGTRGYSAPEYISICVLNEKSNVFSFGAFLF 161
K DF +S +P + ++GT + APE IS + +++S G +
Sbjct: 158 RVKLSDFGFCAQVSKEVPRRKX------LVGTPYWMAPELISRLPYGPEVDIWSLGIMVI 211
Query: 162 ELLAG 166
E++ G
Sbjct: 212 EMVDG 216
>pdb|2Q0N|A Chain A, Structure Of Human P21 Activating Kinase 4 (Pak4) In
Complex With A Consensus Peptide
Length = 301
Score = 37.7 bits (86), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 29/125 (23%), Positives = 57/125 (45%), Gaps = 10/125 (8%)
Query: 46 LVFQSVEYGTLRDCIFGAPLPRLKIASDIVNSLAYLHFGFPRPIVLRNFKTQNILFNEEN 105
+V + +E G L D + + +IA+ + L L + ++ R+ K+ +IL +
Sbjct: 103 VVMEFLEGGALTDIVTHTRMNEEQIAAVCLAVLQALSVLHAQGVIHRDIKSDSILLTHDG 162
Query: 106 VAKWFDF----LLSISIPEGETHITTDRVIGTRGYSAPEYISICVLNEKSNVFSFGAFLF 161
K DF +S +P + ++GT + APE IS + +++S G +
Sbjct: 163 RVKLSDFGFCAQVSKEVPRRKX------LVGTPYWMAPELISRLPYGPEVDIWSLGIMVI 216
Query: 162 ELLAG 166
E++ G
Sbjct: 217 EMVDG 221
>pdb|2OO8|X Chain X, Synthesis, Structural Analysis, And Sar Studies Of
Triazine Derivatives As Potent, Selective Tie-2
Inhibitors
pdb|2OSC|A Chain A, Synthesis, Structural Analysis, And Sar Studies Of
Triazine Derivatives As Potent, Selective Tie-2
Inhibitors
pdb|2P4I|A Chain A, Evolution Of A Highly Selective And Potent
2-(Pyridin-2-Yl)- 1,3,5-Triazine Tie-2 Kinase Inhibitor
pdb|2P4I|B Chain B, Evolution Of A Highly Selective And Potent
2-(Pyridin-2-Yl)- 1,3,5-Triazine Tie-2 Kinase Inhibitor
pdb|3L8P|A Chain A, Crystal Structure Of Cytoplasmic Kinase Domain Of Tie2
Complexed With Inhibitor Cep11207
Length = 317
Score = 37.7 bits (86), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 37/157 (23%), Positives = 66/157 (42%), Gaps = 24/157 (15%)
Query: 28 HNHILKRIGCCLQTPIPILVFQSVEYGTLRDCIFGAPL----PRLKIASDIVNSLA---Y 80
H +I+ +G C L + +G L D + + + P IA+ ++L+
Sbjct: 75 HPNIINLLGACEHRGYLYLAIEYAPHGNLLDFLRKSRVLETDPAFAIANSTASTLSSQQL 134
Query: 81 LHFGF----------PRPIVLRNFKTQNILFNEENVAKWFDFLLSISIPEGETHITTDRV 130
LHF + + R+ +NIL E VAK DF LS + +
Sbjct: 135 LHFAADVARGMDYLSQKQFIHRDLAARNILVGENYVAKIADFGLSRG-----QEVYVKKT 189
Query: 131 IGTR--GYSAPEYISICVLNEKSNVFSFGAFLFELLA 165
+G + A E ++ V S+V+S+G L+E+++
Sbjct: 190 MGRLPVRWMAIESLNYSVYTTNSDVWSYGVLLWEIVS 226
>pdb|3MA6|A Chain A, Crystal Structure Of Kinase Domain Of Tgcdpk1 In Presence
Of 3brb-Pp1
pdb|3MA6|B Chain B, Crystal Structure Of Kinase Domain Of Tgcdpk1 In Presence
Of 3brb-Pp1
Length = 298
Score = 37.7 bits (86), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 41/159 (25%), Positives = 67/159 (42%), Gaps = 14/159 (8%)
Query: 15 SCINNITYAAQMSHNHILKRIGCCLQTPIPILVFQSVEYGTLRDCIFG----APLPRLKI 70
S + + Q+ H +I+K LV + G L D I + + +I
Sbjct: 78 SLLREVQLLKQLDHPNIMKLYEFFEDKGYFYLVGEVYTGGELFDEIISRKRFSEVDAARI 137
Query: 71 ASDIVNSLAYLHFGFPRPIVLRNFKTQNILFNEENVA---KWFDFLLSISIPEGETHITT 127
+++ + Y+H IV R+ K +N+L ++ + DF LS E
Sbjct: 138 IRQVLSGITYMH---KNKIVHRDLKPENLLLESKSKDANIRIIDFGLSTHF---EASKKM 191
Query: 128 DRVIGTRGYSAPEYISICVLNEKSNVFSFGAFLFELLAG 166
IGT Y APE + +EK +V+S G L+ LL+G
Sbjct: 192 KDKIGTAYYIAPEVLH-GTYDEKCDVWSTGVILYILLSG 229
>pdb|2BVA|A Chain A, Crystal Structure Of The Human P21-Activated Kinase 4
pdb|2BVA|B Chain B, Crystal Structure Of The Human P21-Activated Kinase 4
Length = 292
Score = 37.4 bits (85), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 29/125 (23%), Positives = 57/125 (45%), Gaps = 10/125 (8%)
Query: 46 LVFQSVEYGTLRDCIFGAPLPRLKIASDIVNSLAYLHFGFPRPIVLRNFKTQNILFNEEN 105
+V + +E G L D + + +IA+ + L L + ++ R+ K+ +IL +
Sbjct: 94 VVMEFLEGGALTDIVTHTRMNEEQIAAVCLAVLQALSVLHAQGVIHRDIKSDSILLTHDG 153
Query: 106 VAKWFDF----LLSISIPEGETHITTDRVIGTRGYSAPEYISICVLNEKSNVFSFGAFLF 161
K DF +S +P + ++GT + APE IS + +++S G +
Sbjct: 154 RVKLSDFGFCAQVSKEVPRRKX------LVGTPYWMAPELISRLPYGPEVDIWSLGIMVI 207
Query: 162 ELLAG 166
E++ G
Sbjct: 208 EMVDG 212
>pdb|3D94|A Chain A, Crystal Structure Of The Insulin-Like Growth Factor-1
Receptor Kinase In Complex With Pqip
Length = 301
Score = 37.4 bits (85), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 34/162 (20%), Positives = 72/162 (44%), Gaps = 19/162 (11%)
Query: 17 INNITYAAQMSHNHILKRIGCCLQTPIPILVFQSVEYGTLRDCIFG-----------APL 65
+N + + + +H+++ +G Q +++ + + G L+ + AP
Sbjct: 63 LNEASVMKEFNCHHVVRLLGVVSQGQPTLVIMELMTRGDLKSYLRSLRPEMENNPVLAP- 121
Query: 66 PRL----KIASDIVNSLAYLHFGFPRPIVLRNFKTQNILFNEENVAKWFDFLLSISIPEG 121
P L ++A +I + +AYL+ V R+ +N E+ K DF ++ I E
Sbjct: 122 PSLSKMIQMAGEIADGMAYLN---ANKFVHRDLAARNCXVAEDFTVKIGDFGMTRDIYET 178
Query: 122 ETHITTDRVIGTRGYSAPEYISICVLNEKSNVFSFGAFLFEL 163
+ + + + + +PE + V S+V+SFG L+E+
Sbjct: 179 DYYRKGGKGLLPVRWMSPESLKDGVFTTYSDVWSFGVVLWEI 220
>pdb|2CDZ|A Chain A, Crystal Structure Of The Human P21-Activated Kinase 4 In
Complex With Cgp74514a
pdb|2J0I|A Chain A, Crystal Structure Of The Human P21-Activated Kinase 4
Length = 303
Score = 37.4 bits (85), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 29/125 (23%), Positives = 57/125 (45%), Gaps = 10/125 (8%)
Query: 46 LVFQSVEYGTLRDCIFGAPLPRLKIASDIVNSLAYLHFGFPRPIVLRNFKTQNILFNEEN 105
+V + +E G L D + + +IA+ + L L + ++ R+ K+ +IL +
Sbjct: 105 VVMEFLEGGALTDIVTHTRMNEEQIAAVCLAVLQALSVLHAQGVIHRDIKSDSILLTHDG 164
Query: 106 VAKWFDF----LLSISIPEGETHITTDRVIGTRGYSAPEYISICVLNEKSNVFSFGAFLF 161
K DF +S +P + ++GT + APE IS + +++S G +
Sbjct: 165 RVKLSDFGFCAQVSKEVPRRKX------LVGTPYWMAPELISRLPYGPEVDIWSLGIMVI 218
Query: 162 ELLAG 166
E++ G
Sbjct: 219 EMVDG 223
>pdb|2JAV|A Chain A, Human Kinase With Pyrrole-Indolinone Ligand
pdb|2W5B|A Chain A, Human Nek2 Kinase Atpgammas-bound
pdb|2W5H|A Chain A, Human Nek2 Kinase Apo
Length = 279
Score = 37.4 bits (85), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 24/79 (30%), Positives = 41/79 (51%), Gaps = 6/79 (7%)
Query: 89 IVLRNFKTQNILFNEENVAKWFDFLLSISIPEGETHITT--DRVIGTRGYSAPEYISICV 146
++ R+ K N+ + + K DF L+ + H T+ +GT Y +PE ++
Sbjct: 137 VLHRDLKPANVFLDGKQNVKLGDFGLARIL----NHDTSFAKAFVGTPYYMSPEQMNRMS 192
Query: 147 LNEKSNVFSFGAFLFELLA 165
NEKS+++S G L+EL A
Sbjct: 193 YNEKSDIWSLGCLLYELCA 211
>pdb|4E4L|A Chain A, Jak1 Kinase (Jh1 Domain) In Complex With Compound 30
pdb|4E4L|B Chain B, Jak1 Kinase (Jh1 Domain) In Complex With Compound 30
pdb|4E4L|E Chain E, Jak1 Kinase (Jh1 Domain) In Complex With Compound 30
pdb|4E4L|D Chain D, Jak1 Kinase (Jh1 Domain) In Complex With Compound 30
pdb|4E4N|A Chain A, Jak1 Kinase (Jh1 Domain) In Complex With Compound 49
pdb|4E4N|B Chain B, Jak1 Kinase (Jh1 Domain) In Complex With Compound 49
pdb|4E5W|A Chain A, Jak1 Kinase (Jh1 Domain) In Complex With Compound 26
pdb|4E5W|B Chain B, Jak1 Kinase (Jh1 Domain) In Complex With Compound 26
pdb|4EHZ|A Chain A, The Jak1 Kinase Domain In Complex With Inhibitor
pdb|4EHZ|B Chain B, The Jak1 Kinase Domain In Complex With Inhibitor
pdb|4EHZ|C Chain C, The Jak1 Kinase Domain In Complex With Inhibitor
pdb|4EHZ|D Chain D, The Jak1 Kinase Domain In Complex With Inhibitor
pdb|4EI4|A Chain A, Jak1 Kinase (jh1 Domain) In Complex With Compound 20
pdb|4EI4|B Chain B, Jak1 Kinase (jh1 Domain) In Complex With Compound 20
pdb|4FK6|A Chain A, Jak1 Kinase (Jh1 Domain) In Complex With Compound 72
pdb|4FK6|B Chain B, Jak1 Kinase (Jh1 Domain) In Complex With Compound 72
Length = 302
Score = 37.4 bits (85), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 33/103 (32%), Positives = 45/103 (43%), Gaps = 10/103 (9%)
Query: 67 RLKIASDIVNSLAYLHFGFPRPIVLRNFKTQNILFNEENVAKWFDFLLSISIPEGETHIT 126
+LK A I + YL R V R+ +N+L E+ K DF L+ +I ET
Sbjct: 128 QLKYAVQICKGMDYLG---SRQYVHRDLAARNVLVESEHQVKIGDFGLTKAI---ETDKE 181
Query: 127 TDRVIGTRGYSAPEYISICVLNEK----SNVFSFGAFLFELLA 165
V R Y C++ K S+V+SFG L ELL
Sbjct: 182 XXTVKDDRDSPVFWYAPECLMQSKFYIASDVWSFGVTLHELLT 224
>pdb|3MH0|A Chain A, Mutagenesis Of P38 Map Kinase Eshtablishes Key Roles Of
Phe169 In Function And Structural Dynamics And Reveals A
Novel Dfg-Out State
pdb|3O8T|A Chain A, Conformational Plasticity Of P38 Map Kinase Dfg-Motif
Mutants In Response To Inhibitor Binding
Length = 360
Score = 37.4 bits (85), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 30/98 (30%), Positives = 44/98 (44%), Gaps = 15/98 (15%)
Query: 74 IVNSLAYLHFGFPRPIVLRNFKTQNILFNEENVAKWFDFLLSISIPEGETHITTDRVIG- 132
I+ L Y+H I+ R+ K N+ NE+ K D G T D + G
Sbjct: 134 ILRGLKYIHSA---DIIHRDLKPSNLAVNEDCELKILD--------AGLARHTDDEMTGY 182
Query: 133 --TRGYSAPE-YISICVLNEKSNVFSFGAFLFELLAGR 167
TR Y APE ++ N+ +++S G + ELL GR
Sbjct: 183 VATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGR 220
>pdb|3EYG|A Chain A, Crystal Structures Of Jak1 And Jak2 Inhibitor Complexes
pdb|3EYH|A Chain A, Crystal Structures Of Jak1 And Jak2 Inhibitor Complexes
Length = 290
Score = 37.4 bits (85), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 33/103 (32%), Positives = 45/103 (43%), Gaps = 10/103 (9%)
Query: 67 RLKIASDIVNSLAYLHFGFPRPIVLRNFKTQNILFNEENVAKWFDFLLSISIPEGETHIT 126
+LK A I + YL R V R+ +N+L E+ K DF L+ +I ET
Sbjct: 116 QLKYAVQICKGMDYLG---SRQYVHRDLAARNVLVESEHQVKIGDFGLTKAI---ETDKE 169
Query: 127 TDRVIGTRGYSAPEYISICVLNEK----SNVFSFGAFLFELLA 165
V R Y C++ K S+V+SFG L ELL
Sbjct: 170 XXTVKDDRDSPVFWYAPECLMQSKFYIASDVWSFGVTLHELLT 212
>pdb|3I79|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1)
pdb|3I7B|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Bumped Kinase Inhibitor Nm-Pp1
pdb|3N51|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Bumped Kinase Inhibitor
Rm-1-95
pdb|3SX9|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Bumped Kinase Inhibitor,
Rm-1-132
pdb|3SXF|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Bumped Kinase Inhibitor,
Rm-1-89
pdb|3T3U|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Bumped Kinase Inhibitor,
Rm-1-130
pdb|3T3V|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Bumped Kinase Inhibitor,
Rm-1-87
pdb|3UPX|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Inhibitor Uw1300
pdb|3UPZ|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Bumpless Bki Analog Uw1243
pdb|3V51|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Inhibitor Rm-1-176
pdb|3V5P|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Inhibitor Uw1288
pdb|3V5T|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Inhibitor Uw1299
Length = 484
Score = 37.4 bits (85), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 41/159 (25%), Positives = 67/159 (42%), Gaps = 14/159 (8%)
Query: 15 SCINNITYAAQMSHNHILKRIGCCLQTPIPILVFQSVEYGTLRDCIFG----APLPRLKI 70
S + + Q+ H +I+K LV + G L D I + + +I
Sbjct: 72 SLLREVQLLKQLDHPNIMKLYEFFEDKGYFYLVGEVYTGGELFDEIISRKRFSEVDAARI 131
Query: 71 ASDIVNSLAYLHFGFPRPIVLRNFKTQNILFNEENVA---KWFDFLLSISIPEGETHITT 127
+++ + Y+H IV R+ K +N+L ++ + DF LS E
Sbjct: 132 IRQVLSGITYMH---KNKIVHRDLKPENLLLESKSKDANIRIIDFGLSTHF---EASKKM 185
Query: 128 DRVIGTRGYSAPEYISICVLNEKSNVFSFGAFLFELLAG 166
IGT Y APE + +EK +V+S G L+ LL+G
Sbjct: 186 KDKIGTAYYIAPEVLH-GTYDEKCDVWSTGVILYILLSG 223
>pdb|4FIF|A Chain A, Catalytic Domain Of Human Pak4 With Rpkplvdp Peptide
pdb|4FIF|B Chain B, Catalytic Domain Of Human Pak4 With Rpkplvdp Peptide
pdb|4FIG|A Chain A, Catalytic Domain Of Human Pak4
pdb|4FIG|B Chain B, Catalytic Domain Of Human Pak4
pdb|4FIH|A Chain A, Catalytic Domain Of Human Pak4 With Qkftglprqw Peptide
pdb|4FII|A Chain A, Catalytic Domain Of Human Pak4 With Rpkplvdp Peptide
pdb|4FIJ|A Chain A, Catalytic Domain Of Human Pak4
Length = 346
Score = 37.0 bits (84), Expect = 0.009, Method: Compositional matrix adjust.
Identities = 29/125 (23%), Positives = 57/125 (45%), Gaps = 10/125 (8%)
Query: 46 LVFQSVEYGTLRDCIFGAPLPRLKIASDIVNSLAYLHFGFPRPIVLRNFKTQNILFNEEN 105
+V + +E G L D + + +IA+ + L L + ++ R+ K+ +IL +
Sbjct: 148 VVMEFLEGGALTDIVTHTRMNEEQIAAVCLAVLQALSVLHAQGVIHRDIKSDSILLTHDG 207
Query: 106 VAKWFDF----LLSISIPEGETHITTDRVIGTRGYSAPEYISICVLNEKSNVFSFGAFLF 161
K DF +S +P + ++GT + APE IS + +++S G +
Sbjct: 208 RVKLSDFGFCAQVSKEVPRRKX------LVGTPYWMAPELISRLPYGPEVDIWSLGIMVI 261
Query: 162 ELLAG 166
E++ G
Sbjct: 262 EMVDG 266
>pdb|3O8P|A Chain A, Conformational Plasticity Of P38 Map Kinase Dfg Motif
Mutants In Response To Inhibitor Binding
pdb|3MPA|A Chain A, Conformational Plasticity Of P38 Map Kinase Dfg Motif
Mutants In Response To Inhibitor Binding
Length = 360
Score = 37.0 bits (84), Expect = 0.009, Method: Compositional matrix adjust.
Identities = 30/98 (30%), Positives = 44/98 (44%), Gaps = 15/98 (15%)
Query: 74 IVNSLAYLHFGFPRPIVLRNFKTQNILFNEENVAKWFDFLLSISIPEGETHITTDRVIG- 132
I+ L Y+H I+ R+ K N+ NE+ K F G T D + G
Sbjct: 134 ILRGLKYIHSA---DIIHRDLKPSNLAVNEDCELKILGF--------GLARHTDDEMTGY 182
Query: 133 --TRGYSAPE-YISICVLNEKSNVFSFGAFLFELLAGR 167
TR Y APE ++ N+ +++S G + ELL GR
Sbjct: 183 VATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGR 220
>pdb|4FIE|A Chain A, Full-Length Human Pak4
pdb|4FIE|B Chain B, Full-Length Human Pak4
Length = 423
Score = 37.0 bits (84), Expect = 0.009, Method: Compositional matrix adjust.
Identities = 30/128 (23%), Positives = 61/128 (47%), Gaps = 16/128 (12%)
Query: 46 LVFQSVEYGTLRDCIFGAPLPRLKIAS---DIVNSLAYLHFGFPRPIVLRNFKTQNILFN 102
+V + +E G L D + + +IA+ ++ +L+ LH + ++ R+ K+ +IL
Sbjct: 225 VVMEFLEGGALTDIVTHTRMNEEQIAAVCLAVLQALSVLHA---QGVIHRDIKSDSILLT 281
Query: 103 EENVAKWFDF----LLSISIPEGETHITTDRVIGTRGYSAPEYISICVLNEKSNVFSFGA 158
+ K DF +S +P + ++GT + APE IS + +++S G
Sbjct: 282 HDGRVKLSDFGFCAQVSKEVPRRKX------LVGTPYWMAPELISRLPYGPEVDIWSLGI 335
Query: 159 FLFELLAG 166
+ E++ G
Sbjct: 336 MVIEMVDG 343
>pdb|3KU2|A Chain A, Crystal Structure Of Inactivated Form Of Cdpk1 From
Toxoplasma Gondii, Tgme49.101440
Length = 507
Score = 37.0 bits (84), Expect = 0.009, Method: Compositional matrix adjust.
Identities = 41/159 (25%), Positives = 67/159 (42%), Gaps = 14/159 (8%)
Query: 15 SCINNITYAAQMSHNHILKRIGCCLQTPIPILVFQSVEYGTLRDCIFG----APLPRLKI 70
S + + Q+ H +I+K LV + G L D I + + +I
Sbjct: 95 SLLREVQLLKQLDHPNIMKLYEFFEDKGYFYLVGEVYTGGELFDEIISRKRFSEVDAARI 154
Query: 71 ASDIVNSLAYLHFGFPRPIVLRNFKTQNILFNEENVA---KWFDFLLSISIPEGETHITT 127
+++ + Y+H IV R+ K +N+L ++ + DF LS E
Sbjct: 155 IRQVLSGITYMH---KNKIVHRDLKPENLLLESKSKDANIRIIDFGLSTHF---EASKKM 208
Query: 128 DRVIGTRGYSAPEYISICVLNEKSNVFSFGAFLFELLAG 166
IGT Y APE + +EK +V+S G L+ LL+G
Sbjct: 209 KDKIGTAYYIAPEVLH-GTYDEKCDVWSTGVILYILLSG 246
>pdb|4FG7|A Chain A, Crystal Structure Of Human Calcium/calmodulin-dependent
Protein Kinase I 1-293 In Complex With Atp
Length = 293
Score = 37.0 bits (84), Expect = 0.010, Method: Compositional matrix adjust.
Identities = 43/160 (26%), Positives = 68/160 (42%), Gaps = 13/160 (8%)
Query: 14 GSCINNITYAAQMSHNHILKRIGCCLQTPIPILVFQSVEYGTLRDCIFGAPLPRLKIAS- 72
GS N I ++ H +I+ L+ Q V G L D I + AS
Sbjct: 61 GSMENEIAVLHKIKHPNIVALDDIYESGGHLYLIMQLVSGGELFDRIVEKGFYTERDASR 120
Query: 73 ---DIVNSLAYLHFGFPRPIVLRNFKTQNILF---NEENVAKWFDFLLSISIPEGETHIT 126
+++++ YLH IV R+ K +N+L+ +E++ DF LS G T
Sbjct: 121 LIFQVLDAVKYLH---DLGIVHRDLKPENLLYYSLDEDSKIMISDFGLSKMEDPGSVLST 177
Query: 127 TDRVIGTRGYSAPEYISICVLNEKSNVFSFGAFLFELLAG 166
GT GY APE ++ ++ + +S G + LL G
Sbjct: 178 A---CGTPGYVAPEVLAQKPYSKAVDCWSIGVIAYILLCG 214
>pdb|3HX4|A Chain A, Crystal Structure Of Cdpk1 Of Toxoplasma Gondii,
Tgme49_101440, In Presence Of Calcium
Length = 508
Score = 37.0 bits (84), Expect = 0.010, Method: Compositional matrix adjust.
Identities = 41/159 (25%), Positives = 67/159 (42%), Gaps = 14/159 (8%)
Query: 15 SCINNITYAAQMSHNHILKRIGCCLQTPIPILVFQSVEYGTLRDCIFG----APLPRLKI 70
S + + Q+ H +I+K LV + G L D I + + +I
Sbjct: 96 SLLREVQLLKQLDHPNIMKLYEFFEDKGYFYLVGEVYTGGELFDEIISRKRFSEVDAARI 155
Query: 71 ASDIVNSLAYLHFGFPRPIVLRNFKTQNILFNEENVA---KWFDFLLSISIPEGETHITT 127
+++ + Y+H IV R+ K +N+L ++ + DF LS E
Sbjct: 156 IRQVLSGITYMH---KNKIVHRDLKPENLLLESKSKDANIRIIDFGLSTHF---EASKKM 209
Query: 128 DRVIGTRGYSAPEYISICVLNEKSNVFSFGAFLFELLAG 166
IGT Y APE + +EK +V+S G L+ LL+G
Sbjct: 210 KDKIGTAYYIAPEVLH-GTYDEKCDVWSTGVILYILLSG 247
>pdb|3MH1|A Chain A, Mutagenesis Of P38 Map Kinase Establishes Key Roles Of
Phe169 In Function And Structural Dynamics And Reveals A
Novel Dfg-Out State
pdb|3OBG|A Chain A, Conformational Plasticity Of P38 Map Kinase Dfg Mutants In
Response To Inhibitor Binding
pdb|3OC1|A Chain A, Conformational Plasticity Of P38 Map Kinase Dfg Motif
Mutants In Response To Inhibitor Binding
Length = 360
Score = 37.0 bits (84), Expect = 0.011, Method: Compositional matrix adjust.
Identities = 30/98 (30%), Positives = 44/98 (44%), Gaps = 15/98 (15%)
Query: 74 IVNSLAYLHFGFPRPIVLRNFKTQNILFNEENVAKWFDFLLSISIPEGETHITTDRVIG- 132
I+ L Y+H I+ R+ K N+ NE+ K D G T D + G
Sbjct: 134 ILRGLKYIHSA---DIIHRDLKPSNLAVNEDCELKILD--------GGLARHTDDEMTGY 182
Query: 133 --TRGYSAPE-YISICVLNEKSNVFSFGAFLFELLAGR 167
TR Y APE ++ N+ +++S G + ELL GR
Sbjct: 183 VATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGR 220
>pdb|3IGO|A Chain A, Crystal Structure Of Cryptosporidium Parvum Cdpk1,
Cgd3_920
pdb|3MWU|A Chain A, Activated Calcium-Dependent Protein Kinase 1 From
Cryptosporidium Parvum (Cpcdpk1) In Complex With Bumped
Kinase Inhibitor Rm-1-95
pdb|3NCG|A Chain A, Activated Calcium-Dependent Protein Kinase 1 From
Cryptosporidium Parvum (Cpcdpk1) In Complex With Bumped
Kinase Inhibitor Nm-Pp1
Length = 486
Score = 36.6 bits (83), Expect = 0.012, Method: Compositional matrix adjust.
Identities = 33/101 (32%), Positives = 48/101 (47%), Gaps = 10/101 (9%)
Query: 69 KIASDIVNSLAYLHFGFPRPIVLRNFKTQNILFNEENVA---KWFDFLLSISIPEGETHI 125
+I + + + Y+H IV R+ K +NIL + K DF LS +
Sbjct: 125 RIIKQVFSGITYMH---KHNIVHRDLKPENILLESKEKDCDIKIIDFGLSTCFQQNTK-- 179
Query: 126 TTDRVIGTRGYSAPEYISICVLNEKSNVFSFGAFLFELLAG 166
DR IGT Y APE + +EK +V+S G L+ LL+G
Sbjct: 180 MKDR-IGTAYYIAPEVLR-GTYDEKCDVWSAGVILYILLSG 218
>pdb|1A06|A Chain A, Calmodulin-Dependent Protein Kinase From Rat
Length = 332
Score = 36.6 bits (83), Expect = 0.013, Method: Compositional matrix adjust.
Identities = 43/160 (26%), Positives = 68/160 (42%), Gaps = 13/160 (8%)
Query: 14 GSCINNITYAAQMSHNHILKRIGCCLQTPIPILVFQSVEYGTLRDCIFGAPLPRLKIAS- 72
GS N I ++ H +I+ L+ Q V G L D I + AS
Sbjct: 61 GSMENEIAVLHKIKHPNIVALDDIYESGGHLYLIMQLVSGGELFDRIVEKGFYTERDASR 120
Query: 73 ---DIVNSLAYLHFGFPRPIVLRNFKTQNILF---NEENVAKWFDFLLSISIPEGETHIT 126
+++++ YLH IV R+ K +N+L+ +E++ DF LS G T
Sbjct: 121 LIFQVLDAVKYLH---DLGIVHRDLKPENLLYYSLDEDSKIMISDFGLSKMEDPGSVLST 177
Query: 127 TDRVIGTRGYSAPEYISICVLNEKSNVFSFGAFLFELLAG 166
GT GY APE ++ ++ + +S G + LL G
Sbjct: 178 A---CGTPGYVAPEVLAQKPYSKAVDCWSIGVIAYILLCG 214
>pdb|4FG9|A Chain A, Crystal Structure Of Human Calcium/calmodulin-dependent
Protein Kinase I 1-320 In Complex With Atp
pdb|4FG9|B Chain B, Crystal Structure Of Human Calcium/calmodulin-dependent
Protein Kinase I 1-320 In Complex With Atp
pdb|4FGB|A Chain A, Crystal Structure Of Human Calcium/calmodulin-dependent
Protein Kinase I Apo Form
Length = 320
Score = 36.6 bits (83), Expect = 0.013, Method: Compositional matrix adjust.
Identities = 43/160 (26%), Positives = 68/160 (42%), Gaps = 13/160 (8%)
Query: 14 GSCINNITYAAQMSHNHILKRIGCCLQTPIPILVFQSVEYGTLRDCIFGAPLPRLKIAS- 72
GS N I ++ H +I+ L+ Q V G L D I + AS
Sbjct: 61 GSMENEIAVLHKIKHPNIVALDDIYESGGHLYLIMQLVSGGELFDRIVEKGFYTERDASR 120
Query: 73 ---DIVNSLAYLHFGFPRPIVLRNFKTQNILF---NEENVAKWFDFLLSISIPEGETHIT 126
+++++ YLH IV R+ K +N+L+ +E++ DF LS G T
Sbjct: 121 LIFQVLDAVKYLH---DLGIVHRDLKPENLLYYSLDEDSKIMISDFGLSKMEDPGSVLST 177
Query: 127 TDRVIGTRGYSAPEYISICVLNEKSNVFSFGAFLFELLAG 166
GT GY APE ++ ++ + +S G + LL G
Sbjct: 178 A---CGTPGYVAPEVLAQKPYSKAVDCWSIGVIAYILLCG 214
>pdb|4FG8|A Chain A, Crystal Structure Of Human Calcium/calmodulin-dependent
Protein Kinase I 1-315 In Complex With Atp
pdb|4FG8|B Chain B, Crystal Structure Of Human Calcium/calmodulin-dependent
Protein Kinase I 1-315 In Complex With Atp
Length = 315
Score = 36.6 bits (83), Expect = 0.014, Method: Compositional matrix adjust.
Identities = 43/160 (26%), Positives = 68/160 (42%), Gaps = 13/160 (8%)
Query: 14 GSCINNITYAAQMSHNHILKRIGCCLQTPIPILVFQSVEYGTLRDCIFGAPLPRLKIAS- 72
GS N I ++ H +I+ L+ Q V G L D I + AS
Sbjct: 61 GSMENEIAVLHKIKHPNIVALDDIYESGGHLYLIMQLVSGGELFDRIVEKGFYTERDASR 120
Query: 73 ---DIVNSLAYLHFGFPRPIVLRNFKTQNILF---NEENVAKWFDFLLSISIPEGETHIT 126
+++++ YLH IV R+ K +N+L+ +E++ DF LS G T
Sbjct: 121 LIFQVLDAVKYLH---DLGIVHRDLKPENLLYYSLDEDSKIMISDFGLSKMEDPGSVLST 177
Query: 127 TDRVIGTRGYSAPEYISICVLNEKSNVFSFGAFLFELLAG 166
GT GY APE ++ ++ + +S G + LL G
Sbjct: 178 A---CGTPGYVAPEVLAQKPYSKAVDCWSIGVIAYILLCG 214
>pdb|4AF3|A Chain A, Human Aurora B Kinase In Complex With Incenp And Vx-680
Length = 292
Score = 36.6 bits (83), Expect = 0.014, Method: Compositional matrix adjust.
Identities = 27/97 (27%), Positives = 46/97 (47%), Gaps = 7/97 (7%)
Query: 70 IASDIVNSLAYLHFGFPRPIVLRNFKTQNILFNEENVAKWFDFLLSISIPEGETHITTDR 129
I ++ ++L Y H + ++ R+ K +N+L + K DF S+ P +
Sbjct: 128 IMEELADALMYCHG---KKVIHRDIKPENLLLGLKGELKIADFGWSVHAPS----LRRKT 180
Query: 130 VIGTRGYSAPEYISICVLNEKSNVFSFGAFLFELLAG 166
+ GT Y PE I + NEK +++ G +ELL G
Sbjct: 181 MCGTLDYLPPEMIEGRMHNEKVDLWCIGVLCYELLVG 217
>pdb|2IWI|A Chain A, Crystal Structure Of The Human Pim2 In Complex With A
Ruthenium Organometallic Ligand Ru1
pdb|2IWI|B Chain B, Crystal Structure Of The Human Pim2 In Complex With A
Ruthenium Organometallic Ligand Ru1
Length = 312
Score = 36.6 bits (83), Expect = 0.014, Method: Compositional matrix adjust.
Identities = 29/84 (34%), Positives = 44/84 (52%), Gaps = 6/84 (7%)
Query: 87 RPIVLRNFKTQNILFN-EENVAKWFDFLLSISIPEGETHITTDRVIGTRGYSAPEYISIC 145
R +V R+ K +NIL + AK DF S ++ E + D GTR YS PE+IS
Sbjct: 158 RGVVHRDIKDENILIDLRRGCAKLIDFG-SGALLHDEPYTDFD---GTRVYSPPEWISRH 213
Query: 146 VLNE-KSNVFSFGAFLFELLAGRI 168
+ + V+S G L++++ G I
Sbjct: 214 QYHALPATVWSLGILLYDMVCGDI 237
>pdb|4FVR|A Chain A, Crystal Structure Of The Jak2 Pseudokinase Domain Mutant
V617f (Mg- Atp-Bound Form)
Length = 289
Score = 36.2 bits (82), Expect = 0.017, Method: Compositional matrix adjust.
Identities = 41/168 (24%), Positives = 77/168 (45%), Gaps = 15/168 (8%)
Query: 9 HRHTYGSCINNITYAAQMSHNHILKRIGCCLQTPIPILVFQSVEYGTL-------RDCIF 61
HR+ S + +++SH H++ G C ILV + V++G+L ++CI
Sbjct: 52 HRNYSESFFEAASMMSKLSHKHLVLNYGVCFCGDENILVQEFVKFGSLDTYLKKNKNCI- 110
Query: 62 GAPLPRLKIASDIVNSLAYLHFGFPRPIVLRNFKTQNILF-NEENVAKWFDFLLSISIPE 120
L +L++A + + +HF ++ N +NIL EE+ + +S P
Sbjct: 111 -NILWKLEVAKQLAWA---MHFLEENTLIHGNVCAKNILLIREEDRKTGNPPFIKLSDPG 166
Query: 121 GETHITTDRVIGTR-GYSAPEYI-SICVLNEKSNVFSFGAFLFELLAG 166
+ ++ R + PE I + LN ++ +SFG L+E+ +G
Sbjct: 167 ISITVLPKDILQERIPWVPPECIENPKNLNLATDKWSFGTTLWEICSG 214
>pdb|4APC|A Chain A, Crystal Structure Of Human Nima-Related Kinase 1 (Nek1)
pdb|4APC|B Chain B, Crystal Structure Of Human Nima-Related Kinase 1 (Nek1)
pdb|4B9D|A Chain A, Crystal Structure Of Human Nima-Related Kinase 1 (Nek1)
With Inhibitor.
pdb|4B9D|B Chain B, Crystal Structure Of Human Nima-Related Kinase 1 (Nek1)
With Inhibitor
Length = 350
Score = 36.2 bits (82), Expect = 0.017, Method: Compositional matrix adjust.
Identities = 41/156 (26%), Positives = 60/156 (38%), Gaps = 31/156 (19%)
Query: 87 RPIVLRNFKTQNILFNEENVAKWFDFLLSISIPEGETHITTDRVIGTRGYSAPEYISICV 146
R I+ R+ K+QNI ++ + DF I+ T IGT Y +PE
Sbjct: 144 RKILHRDIKSQNIFLTKDGTVQLGDF--GIARVLNSTVELARACIGTPYYLSPEICENKP 201
Query: 147 LNEKSNVFSFGAFLFELLAGRIHIWDLLKDTHDHGCFFNEYLKNYLEDKRFTGIPAPIIV 206
N KS++++ G L+EL LK + G N LK II
Sbjct: 202 YNNKSDIWALGCVLYELCT--------LKHAFEAGSMKNLVLK--------------IIS 239
Query: 207 QDIPCIEKEQQLHAS---AQLTLECVNNSPEDRPTM 239
P + LH S L + +P DRP++
Sbjct: 240 GSFPPV----SLHYSYDLRSLVSQLFKRNPRDRPSV 271
>pdb|3SOA|A Chain A, Full-Length Human Camkii
Length = 444
Score = 36.2 bits (82), Expect = 0.017, Method: Compositional matrix adjust.
Identities = 29/93 (31%), Positives = 44/93 (47%), Gaps = 7/93 (7%)
Query: 89 IVLRNFKTQNILFNEE---NVAKWFDFLLSISIPEGETHITTDRVIGTRGYSAPEYISIC 145
+V RN K +N+L + K DF L+I + EGE GT GY +PE +
Sbjct: 131 VVHRNLKPENLLLASKLKGAAVKLADFGLAIEV-EGEQQAWFG-FAGTPGYLSPEVLRKD 188
Query: 146 VLNEKSNVFSFGAFLFELLAGRIHIWDLLKDTH 178
+ ++++ G L+ LL G WD +D H
Sbjct: 189 PYGKPVDLWACGVILYILLVGYPPFWD--EDQH 219
>pdb|3SXR|A Chain A, Crystal Structure Of Bmx Non-Receptor Tyrosine Kinase
Complex With Dasatinib
pdb|3SXR|B Chain B, Crystal Structure Of Bmx Non-Receptor Tyrosine Kinase
Complex With Dasatinib
pdb|3SXS|A Chain A, Crystal Structure Of Bmx Non-Receptor Tyrosine Kinase
Complexed With Pp2
Length = 268
Score = 36.2 bits (82), Expect = 0.018, Method: Compositional matrix adjust.
Identities = 31/149 (20%), Positives = 71/149 (47%), Gaps = 15/149 (10%)
Query: 25 QMSHNHILKRIGCCLQTPIPILVFQSVEYGTLRDCIFG-----APLPRLKIASDIVNSLA 79
++SH ++K G C + +V + + G L + + P L++ D+ +A
Sbjct: 59 KLSHPKLVKFYGVCSKEYPIYIVTEYISNGCLLNYLRSHGKGLEPSQLLEMCYDVCEGMA 118
Query: 80 YLHFGFPRPIVLRNFKTQNILFNEENVAKWFDFLLSISIPEGETHITTDRVIGTR---GY 136
+L + R+ +N L + + K DF ++ + + + ++++ +GT+ +
Sbjct: 119 FLE---SHQFIHRDLAARNCLVDRDLCVKVSDFGMTRYVLD-DQYVSS---VGTKFPVKW 171
Query: 137 SAPEYISICVLNEKSNVFSFGAFLFELLA 165
SAPE + KS+V++FG ++E+ +
Sbjct: 172 SAPEVFHYFKYSSKSDVWAFGILMWEVFS 200
>pdb|4F1O|A Chain A, Crystal Structure Of The L1180t Mutant Roco4 Kinase Domain
From D. Discoideum Bound To Appcp
Length = 287
Score = 35.8 bits (81), Expect = 0.020, Method: Compositional matrix adjust.
Identities = 42/155 (27%), Positives = 70/155 (45%), Gaps = 20/155 (12%)
Query: 24 AQMSHNHILKRIGCCLQTPIPILVFQSVEYGTLRDCIFGAPLP-----RLKIASDIVNSL 78
+ ++H +I+K G + P P +V + V G L + P +L++ DI +
Sbjct: 78 SNLNHPNIVKLYGL-MHNP-PRMVMEFVPCGDLYHRLLDKAHPIKWSVKLRLMLDIALGI 135
Query: 79 AYLHFGFPRPIVLRNFKTQNILFN--EENV---AKWFDFLLSISIPEGETHITTDRVIGT 133
Y+ P PIV R+ ++ NI +EN AK DF S + H + ++G
Sbjct: 136 EYMQNQNP-PIVHRDLRSPNIFLQSLDENAPVCAKVADFGTS----QQSVH-SVSGLLGN 189
Query: 134 RGYSAPEYISIC--VLNEKSNVFSFGAFLFELLAG 166
+ APE I EK++ +SF L+ +L G
Sbjct: 190 FQWMAPETIGAEEESYTEKADTYSFAMILYTILTG 224
>pdb|1RJB|A Chain A, Crystal Structure Of Flt3
Length = 344
Score = 35.8 bits (81), Expect = 0.023, Method: Compositional matrix adjust.
Identities = 37/166 (22%), Positives = 63/166 (37%), Gaps = 30/166 (18%)
Query: 27 SHNHILKRIGCCLQTPIPILVFQSVEYGTL------------RDCIFGAPLPRLKIASD- 73
SH +I+ +G C + L+F+ YG L D I RL+ D
Sbjct: 107 SHENIVNLLGACTLSGPIYLIFEYCCYGDLLNYLRSKREKFSEDEIEYENQKRLEEEEDL 166
Query: 74 --------------IVNSLAYLHFGFPRPIVLRNFKTQNILFNEENVAKWFDFLLSISIP 119
+ + +L F + V R+ +N+L V K DF L+ I
Sbjct: 167 NVLTFEDLLCFAYQVAKGMEFLEF---KSCVHRDLAARNVLVTHGKVVKICDFGLARDIM 223
Query: 120 EGETHITTDRVIGTRGYSAPEYISICVLNEKSNVFSFGAFLFELLA 165
++ + APE + + KS+V+S+G L+E+ +
Sbjct: 224 SDSNYVVRGNARLPVKWMAPESLFEGIYTIKSDVWSYGILLWEIFS 269
>pdb|4IC7|A Chain A, Crystal Structure Of The Erk5 Kinase Domain In Complex
With An Mkk5 Binding Fragment
pdb|4IC7|D Chain D, Crystal Structure Of The Erk5 Kinase Domain In Complex
With An Mkk5 Binding Fragment
pdb|4IC8|A Chain A, Crystal Structure Of The Apo Erk5 Kinase Domain
pdb|4IC8|B Chain B, Crystal Structure Of The Apo Erk5 Kinase Domain
Length = 442
Score = 35.4 bits (80), Expect = 0.030, Method: Compositional matrix adjust.
Identities = 28/98 (28%), Positives = 47/98 (47%), Gaps = 8/98 (8%)
Query: 74 IVNSLAYLHFGFPRPIVLRNFKTQNILFNEENVAKWFDFLLSISI---PEGETHITTDRV 130
++ L Y+H ++ R+ K N+L NE K DF ++ + P + T+ V
Sbjct: 168 LLRGLKYMHSA---QVIHRDLKPSNLLVNENCELKIGDFGMARGLCTSPAEHQYFMTEYV 224
Query: 131 IGTRGYSAPE-YISICVLNEKSNVFSFGAFLFELLAGR 167
TR Y APE +S+ + +++S G E+LA R
Sbjct: 225 -ATRWYRAPELMLSLHEYTQAIDLWSVGCIFGEMLARR 261
>pdb|4B99|A Chain A, Crystal Structure Of Mapk7 (Erk5) With Inhibitor
Length = 398
Score = 35.0 bits (79), Expect = 0.033, Method: Compositional matrix adjust.
Identities = 28/98 (28%), Positives = 47/98 (47%), Gaps = 8/98 (8%)
Query: 74 IVNSLAYLHFGFPRPIVLRNFKTQNILFNEENVAKWFDFLLSISI---PEGETHITTDRV 130
++ L Y+H ++ R+ K N+L NE K DF ++ + P + T+ V
Sbjct: 167 LLRGLKYMHSA---QVIHRDLKPSNLLVNENCELKIGDFGMARGLCTSPAEHQYFMTEYV 223
Query: 131 IGTRGYSAPE-YISICVLNEKSNVFSFGAFLFELLAGR 167
TR Y APE +S+ + +++S G E+LA R
Sbjct: 224 -ATRWYRAPELMLSLHEYTQAIDLWSVGCIFGEMLARR 260
>pdb|2V7O|A Chain A, Crystal Structure Of Human Calcium-Calmodulin-Dependent
Protein Kinase Ii Gamma
Length = 336
Score = 35.0 bits (79), Expect = 0.034, Method: Compositional matrix adjust.
Identities = 31/108 (28%), Positives = 51/108 (47%), Gaps = 10/108 (9%)
Query: 74 IVNSLAYLHFGFPRPIVLRNFKTQNILFNEE---NVAKWFDFLLSISIPEGETHITTDRV 130
I+ S+ ++H IV R+ K +N+L + K DF L+I + +GE
Sbjct: 139 ILESVNHIH---QHDIVHRDLKPENLLLASKCKGAAVKLADFGLAIEV-QGEQQAWFG-F 193
Query: 131 IGTRGYSAPEYISICVLNEKSNVFSFGAFLFELLAGRIHIWDLLKDTH 178
GT GY +PE + + ++++ G L+ LL G WD +D H
Sbjct: 194 AGTPGYLSPEVLRKDPYGKPVDIWACGVILYILLVGYPPFWD--EDQH 239
>pdb|2H34|A Chain A, Apoenzyme Crystal Structure Of The Tuberculosis
SerineTHREONINE Kinase, Pkne
pdb|2H34|B Chain B, Apoenzyme Crystal Structure Of The Tuberculosis
SerineTHREONINE Kinase, Pkne
Length = 309
Score = 35.0 bits (79), Expect = 0.036, Method: Compositional matrix adjust.
Identities = 22/76 (28%), Positives = 38/76 (50%), Gaps = 3/76 (3%)
Query: 92 RNFKTQNILFNEENVAKWFDF-LLSISIPEGETHITTDRVIGTRGYSAPEYISICVLNEK 150
R+ K +NIL + ++ A DF + S + E T + +GT Y APE S +
Sbjct: 158 RDVKPENILVSADDFAYLVDFGIASATTDEKLTQLGN--TVGTLYYXAPERFSESHATYR 215
Query: 151 SNVFSFGAFLFELLAG 166
+++++ L+E L G
Sbjct: 216 ADIYALTCVLYECLTG 231
>pdb|2VZ6|A Chain A, Structure Of Human Calcium Calmodulin Dependent Protein
Kinase Type Ii Alpha (Camk2a) In Complex With Indirubin
E804
pdb|2VZ6|B Chain B, Structure Of Human Calcium Calmodulin Dependent Protein
Kinase Type Ii Alpha (Camk2a) In Complex With Indirubin
E804
Length = 313
Score = 35.0 bits (79), Expect = 0.037, Method: Compositional matrix adjust.
Identities = 28/93 (30%), Positives = 44/93 (47%), Gaps = 7/93 (7%)
Query: 89 IVLRNFKTQNILFNEE---NVAKWFDFLLSISIPEGETHITTDRVIGTRGYSAPEYISIC 145
+V R+ K +N+L + K DF L+I + EGE GT GY +PE +
Sbjct: 142 VVHRDLKPENLLLASKLKGAAVKLADFGLAIEV-EGEQQAWFG-FAGTPGYLSPEVLRKD 199
Query: 146 VLNEKSNVFSFGAFLFELLAGRIHIWDLLKDTH 178
+ ++++ G L+ LL G WD +D H
Sbjct: 200 PYGKPVDLWACGVILYILLVGYPPFWD--EDQH 230
>pdb|2ESM|A Chain A, Crystal Structure Of Rock 1 Bound To Fasudil
pdb|2ESM|B Chain B, Crystal Structure Of Rock 1 Bound To Fasudil
pdb|2ETK|A Chain A, Crystal Structure Of Rock 1 Bound To Hydroxyfasudil
pdb|2ETK|B Chain B, Crystal Structure Of Rock 1 Bound To Hydroxyfasudil
pdb|2ETR|A Chain A, Crystal Structure Of Rock I Bound To Y-27632
pdb|2ETR|B Chain B, Crystal Structure Of Rock I Bound To Y-27632
pdb|3D9V|A Chain A, Crystal Structure Of Rock I Bound To H-1152p A Di-
Methylated Variant Of Fasudil
pdb|3D9V|B Chain B, Crystal Structure Of Rock I Bound To H-1152p A Di-
Methylated Variant Of Fasudil
pdb|3NCZ|A Chain A, X-Ray Co-Structure Of Rho-Associated Protein Kinase
(Rock1) With A Potent 2h-Isoquinolin-1-One Inhibitor
pdb|3NCZ|B Chain B, X-Ray Co-Structure Of Rho-Associated Protein Kinase
(Rock1) With A Potent 2h-Isoquinolin-1-One Inhibitor
pdb|3NCZ|C Chain C, X-Ray Co-Structure Of Rho-Associated Protein Kinase
(Rock1) With A Potent 2h-Isoquinolin-1-One Inhibitor
pdb|3NCZ|D Chain D, X-Ray Co-Structure Of Rho-Associated Protein Kinase
(Rock1) With A Potent 2h-Isoquinolin-1-One Inhibitor
pdb|3NDM|A Chain A, Crystal Structure Of Rho-Associated Protein Kinase (Rock1)
With A Potent Isoquinolone Derivative
pdb|3NDM|B Chain B, Crystal Structure Of Rho-Associated Protein Kinase (Rock1)
With A Potent Isoquinolone Derivative
pdb|3NDM|C Chain C, Crystal Structure Of Rho-Associated Protein Kinase (Rock1)
With A Potent Isoquinolone Derivative
pdb|3NDM|D Chain D, Crystal Structure Of Rho-Associated Protein Kinase (Rock1)
With A Potent Isoquinolone Derivative
Length = 415
Score = 35.0 bits (79), Expect = 0.039, Method: Compositional matrix adjust.
Identities = 25/101 (24%), Positives = 47/101 (46%), Gaps = 14/101 (13%)
Query: 70 IASDIVNSLAYLHFGFPRPIVLRNFKTQNILFNEENVAKWFDFLLSISIPEGETHITTDR 129
+A D ++S+ ++H R+ K N+L ++ K DF + + + E + D
Sbjct: 184 LALDAIHSMGFIH---------RDVKPDNMLLDKSGHLKLADFGTCMKMNK-EGMVRCDT 233
Query: 130 VIGTRGYSAPEYISI----CVLNEKSNVFSFGAFLFELLAG 166
+GT Y +PE + + + +S G FL+E+L G
Sbjct: 234 AVGTPDYISPEVLKSQGGDGYYGRECDWWSVGVFLYEMLVG 274
>pdb|1ZWS|A Chain A, Crystal Structure Of The Catalytic Domain Of Human Drp-1
Kinase
pdb|1ZWS|B Chain B, Crystal Structure Of The Catalytic Domain Of Human Drp-1
Kinase
pdb|1ZWS|C Chain C, Crystal Structure Of The Catalytic Domain Of Human Drp-1
Kinase
pdb|1ZWS|D Chain D, Crystal Structure Of The Catalytic Domain Of Human Drp-1
Kinase
pdb|1ZWS|E Chain E, Crystal Structure Of The Catalytic Domain Of Human Drp-1
Kinase
pdb|1ZWS|F Chain F, Crystal Structure Of The Catalytic Domain Of Human Drp-1
Kinase
pdb|1ZWS|G Chain G, Crystal Structure Of The Catalytic Domain Of Human Drp-1
Kinase
pdb|1ZWS|H Chain H, Crystal Structure Of The Catalytic Domain Of Human Drp-1
Kinase
Length = 288
Score = 35.0 bits (79), Expect = 0.041, Method: Compositional matrix adjust.
Identities = 26/97 (26%), Positives = 50/97 (51%), Gaps = 10/97 (10%)
Query: 74 IVNSLAYLHFGFPRPIVLRNFKTQNILFNEENVA----KWFDFLLSISIPEGETHITTDR 129
I++ + YLH + I + K +NI+ ++N+ K DF L+ I +G +
Sbjct: 124 ILDGVNYLH---TKKIAHFDLKPENIMLLDKNIPIPHIKLIDFGLAHEIEDG---VEFKN 177
Query: 130 VIGTRGYSAPEYISICVLNEKSNVFSFGAFLFELLAG 166
+ GT + APE ++ L +++++S G + LL+G
Sbjct: 178 IFGTPEFVAPEIVNYEPLGLEADMWSIGVITYILLSG 214
>pdb|2V55|A Chain A, Mechanism Of Multi-site Phosphorylation From A Rock-i:rhoe
Complex Structure
pdb|2V55|C Chain C, Mechanism Of Multi-site Phosphorylation From A Rock-i:rhoe
Complex Structure
Length = 406
Score = 35.0 bits (79), Expect = 0.041, Method: Compositional matrix adjust.
Identities = 25/101 (24%), Positives = 47/101 (46%), Gaps = 14/101 (13%)
Query: 70 IASDIVNSLAYLHFGFPRPIVLRNFKTQNILFNEENVAKWFDFLLSISIPEGETHITTDR 129
+A D ++S+ ++H R+ K N+L ++ K DF + + + E + D
Sbjct: 184 LALDAIHSMGFIH---------RDVKPDNMLLDKSGHLKLADFGTCMKMNK-EGMVRCDT 233
Query: 130 VIGTRGYSAPEYISI----CVLNEKSNVFSFGAFLFELLAG 166
+GT Y +PE + + + +S G FL+E+L G
Sbjct: 234 AVGTPDYISPEVLKSQGGDGYYGRECDWWSVGVFLYEMLVG 274
>pdb|4BC6|A Chain A, Crystal Structure Of Human Serine Threonine Kinase-10
Bound To Novel Bosutinib Isoform 1, Previously Thought
To Be Bosutinib
Length = 293
Score = 34.7 bits (78), Expect = 0.045, Method: Compositional matrix adjust.
Identities = 25/91 (27%), Positives = 42/91 (46%), Gaps = 7/91 (7%)
Query: 78 LAYLHFGFPRPIVLRNFKTQNILFNEENVAKWFDFLLSISIPEGETHITTDRVIGTRGYS 137
L L+F + I+ R+ K N+L E + DF +S +T D IGT +
Sbjct: 119 LEALNFLHSKRIIHRDLKAGNVLMTLEGDIRLADF--GVSAKNLKTLQKRDSFIGTPYWM 176
Query: 138 APEYISICVLNE-----KSNVFSFGAFLFEL 163
APE + + + K++++S G L E+
Sbjct: 177 APEVVMCETMKDTPYDYKADIWSLGITLIEM 207
>pdb|2F2U|A Chain A, Crystal Structure Of The Rho-Kinase Kinase Domain
pdb|2F2U|B Chain B, Crystal Structure Of The Rho-Kinase Kinase Domain
pdb|2H9V|A Chain A, Structural Basis For Induced-Fit Binding Of Rho-Kinase To
The Inhibitor Y27632
Length = 402
Score = 34.7 bits (78), Expect = 0.045, Method: Compositional matrix adjust.
Identities = 28/102 (27%), Positives = 46/102 (45%), Gaps = 16/102 (15%)
Query: 70 IASDIVNSLAYLHFGFPRPIVLRNFKTQNILFNEENVAKWFDFLLSISIPE-GETHITTD 128
+A D ++S+ +H R+ K N+L ++ K DF + + E G H D
Sbjct: 185 LALDAIHSMGLIH---------RDVKPDNMLLDKHGHLKLADFGTCMKMDETGMVH--CD 233
Query: 129 RVIGTRGYSAPEYISI----CVLNEKSNVFSFGAFLFELLAG 166
+GT Y +PE + + + +S G FLFE+L G
Sbjct: 234 TAVGTPDYISPEVLKSQGGDGYYGRECDWWSVGVFLFEMLVG 275
>pdb|3V8S|A Chain A, Human Rho-Associated Protein Kinase 1 (Rock 1) In Complex
With Indazole Derivative (Compound 18)
pdb|3V8S|B Chain B, Human Rho-Associated Protein Kinase 1 (Rock 1) In Complex
With Indazole Derivative (Compound 18)
pdb|3V8S|C Chain C, Human Rho-Associated Protein Kinase 1 (Rock 1) In Complex
With Indazole Derivative (Compound 18)
pdb|3V8S|D Chain D, Human Rho-Associated Protein Kinase 1 (Rock 1) In Complex
With Indazole Derivative (Compound 18)
pdb|3TV7|A Chain A, Human Rho-associated Protein Kinase 1 (rock 1) In Complex
With Rki1342
pdb|3TV7|B Chain B, Human Rho-associated Protein Kinase 1 (rock 1) In Complex
With Rki1342
pdb|3TV7|C Chain C, Human Rho-associated Protein Kinase 1 (rock 1) In Complex
With Rki1342
pdb|3TV7|D Chain D, Human Rho-associated Protein Kinase 1 (rock 1) In Complex
With Rki1342
pdb|3TWJ|A Chain A, Rho-Associated Protein Kinase 1 (Rock 1) In Complex With
Rki1447
pdb|3TWJ|B Chain B, Rho-Associated Protein Kinase 1 (Rock 1) In Complex With
Rki1447
pdb|3TWJ|C Chain C, Rho-Associated Protein Kinase 1 (Rock 1) In Complex With
Rki1447
pdb|3TWJ|D Chain D, Rho-Associated Protein Kinase 1 (Rock 1) In Complex With
Rki1447
Length = 410
Score = 34.7 bits (78), Expect = 0.046, Method: Compositional matrix adjust.
Identities = 25/101 (24%), Positives = 47/101 (46%), Gaps = 14/101 (13%)
Query: 70 IASDIVNSLAYLHFGFPRPIVLRNFKTQNILFNEENVAKWFDFLLSISIPEGETHITTDR 129
+A D ++S+ ++H R+ K N+L ++ K DF + + + E + D
Sbjct: 179 LALDAIHSMGFIH---------RDVKPDNMLLDKSGHLKLADFGTCMKMNK-EGMVRCDT 228
Query: 130 VIGTRGYSAPEYISI----CVLNEKSNVFSFGAFLFELLAG 166
+GT Y +PE + + + +S G FL+E+L G
Sbjct: 229 AVGTPDYISPEVLKSQGGDGYYGRECDWWSVGVFLYEMLVG 269
>pdb|2J7T|A Chain A, Crystal Structure Of Human Serine Threonine Kinase-10
Bound To Su11274
pdb|4AOT|A Chain A, Crystal Structure Of Human Serine Threonine Kinase-10
(Lok) Bound To Gw830263a
pdb|4AOT|B Chain B, Crystal Structure Of Human Serine Threonine Kinase-10
(Lok) Bound To Gw830263a
pdb|4EQU|A Chain A, Human Stk-10 (Lok) Kinase Domain In Dfg-Out Conformation
With Inhibitor Dsa-7
pdb|4EQU|B Chain B, Human Stk-10 (Lok) Kinase Domain In Dfg-Out Conformation
With Inhibitor Dsa-7
Length = 302
Score = 34.7 bits (78), Expect = 0.048, Method: Compositional matrix adjust.
Identities = 25/91 (27%), Positives = 42/91 (46%), Gaps = 7/91 (7%)
Query: 78 LAYLHFGFPRPIVLRNFKTQNILFNEENVAKWFDFLLSISIPEGETHITTDRVIGTRGYS 137
L L+F + I+ R+ K N+L E + DF +S +T D IGT +
Sbjct: 127 LEALNFLHSKRIIHRDLKAGNVLMTLEGDIRLADF--GVSAKNLKTLQKRDSFIGTPYWM 184
Query: 138 APEYISICVLNE-----KSNVFSFGAFLFEL 163
APE + + + K++++S G L E+
Sbjct: 185 APEVVMCETMKDTPYDYKADIWSLGITLIEM 215
>pdb|1WMK|A Chain A, Human Death-Associated Kinase Drp-1, Mutant S308d D40
pdb|1WMK|E Chain E, Human Death-Associated Kinase Drp-1, Mutant S308d D40
pdb|1WMK|C Chain C, Human Death-Associated Kinase Drp-1, Mutant S308d D40
pdb|1WMK|B Chain B, Human Death-Associated Kinase Drp-1, Mutant S308d D40
pdb|1WMK|F Chain F, Human Death-Associated Kinase Drp-1, Mutant S308d D40
pdb|1WMK|D Chain D, Human Death-Associated Kinase Drp-1, Mutant S308d D40
pdb|1WMK|H Chain H, Human Death-Associated Kinase Drp-1, Mutant S308d D40
pdb|1WMK|G Chain G, Human Death-Associated Kinase Drp-1, Mutant S308d D40
Length = 321
Score = 34.7 bits (78), Expect = 0.051, Method: Compositional matrix adjust.
Identities = 26/97 (26%), Positives = 50/97 (51%), Gaps = 10/97 (10%)
Query: 74 IVNSLAYLHFGFPRPIVLRNFKTQNILFNEENVA----KWFDFLLSISIPEGETHITTDR 129
I++ + YLH + I + K +NI+ ++N+ K DF L+ I +G +
Sbjct: 124 ILDGVNYLH---TKKIAHFDLKPENIMLLDKNIPIPHIKLIDFGLAHEIEDG---VEFKN 177
Query: 130 VIGTRGYSAPEYISICVLNEKSNVFSFGAFLFELLAG 166
+ GT + APE ++ L +++++S G + LL+G
Sbjct: 178 IFGTPEFVAPEIVNYEPLGLEADMWSIGVITYILLSG 214
>pdb|3I7C|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Bumped Kinase Inhibitor Na-Pp2
pdb|3NYV|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Non-Specific Inhibitor
Whi-P180
Length = 484
Score = 34.7 bits (78), Expect = 0.051, Method: Compositional matrix adjust.
Identities = 41/159 (25%), Positives = 65/159 (40%), Gaps = 14/159 (8%)
Query: 15 SCINNITYAAQMSHNHILKRIGCCLQTPIPILVFQSVEYGTLRDCIFG----APLPRLKI 70
S + + Q+ H +I K LV + G L D I + + +I
Sbjct: 72 SLLREVQLLKQLDHPNIXKLYEFFEDKGYFYLVGEVYTGGELFDEIISRKRFSEVDAARI 131
Query: 71 ASDIVNSLAYLHFGFPRPIVLRNFKTQNILFNEENVA---KWFDFLLSISIPEGETHITT 127
+++ + Y H IV R+ K +N+L ++ + DF LS E
Sbjct: 132 IRQVLSGITYXH---KNKIVHRDLKPENLLLESKSKDANIRIIDFGLSTHF---EASKKX 185
Query: 128 DRVIGTRGYSAPEYISICVLNEKSNVFSFGAFLFELLAG 166
IGT Y APE + +EK +V+S G L+ LL+G
Sbjct: 186 KDKIGTAYYIAPEVLH-GTYDEKCDVWSTGVILYILLSG 223
>pdb|3KMW|A Chain A, Crystal Structure Of The IlkALPHA-Parvin Core Complex
(Mgatp)
pdb|3REP|A Chain A, Crystal Structure Of The IlkALPHA-Parvin Core Complex
(Mnatp)
Length = 271
Score = 34.7 bits (78), Expect = 0.051, Method: Compositional matrix adjust.
Identities = 35/159 (22%), Positives = 72/159 (45%), Gaps = 21/159 (13%)
Query: 27 SHNHILKRIGCCLQTPI--PILVFQSVEYGTLRDCIFGAP------LPRLKIASDIVNSL 78
SH ++L +G C P P L+ + YG+L + + +K A D+ +
Sbjct: 65 SHPNVLPVLGACQSPPAPHPTLITHWMPYGSLYNVLHEGTNFVVDQSQAVKFALDMARGM 124
Query: 79 AYLHFGFPRPIVLRN-FKTQNILFNEENVAKWFDFLLSISIPEGETHITTDRVIGTRGYS 137
A+LH P++ R+ +++++ +E+ A+ IS+ + + + + +
Sbjct: 125 AFLHTL--EPLIPRHALNSRSVMIDEDMTAR-------ISMADVKFSFQSPGRMYAPAWV 175
Query: 138 APEYISICV--LNEKS-NVFSFGAFLFELLAGRIHIWDL 173
APE + N +S +++SF L+EL+ + DL
Sbjct: 176 APEALQKKPEDTNRRSADMWSFAVLLWELVTREVPFADL 214
>pdb|1Z9X|A Chain A, Human Drp-1 Kinase, W305s S308a D40 Mutant, Crystal Form
With 3 Monomers In The Asymmetric Unit
pdb|1Z9X|B Chain B, Human Drp-1 Kinase, W305s S308a D40 Mutant, Crystal Form
With 3 Monomers In The Asymmetric Unit
pdb|1Z9X|C Chain C, Human Drp-1 Kinase, W305s S308a D40 Mutant, Crystal Form
With 3 Monomers In The Asymmetric Unit
Length = 321
Score = 34.7 bits (78), Expect = 0.051, Method: Compositional matrix adjust.
Identities = 26/97 (26%), Positives = 50/97 (51%), Gaps = 10/97 (10%)
Query: 74 IVNSLAYLHFGFPRPIVLRNFKTQNILFNEENVA----KWFDFLLSISIPEGETHITTDR 129
I++ + YLH + I + K +NI+ ++N+ K DF L+ I +G +
Sbjct: 124 ILDGVNYLH---TKKIAHFDLKPENIMLLDKNIPIPHIKLIDFGLAHEIEDG---VEFKN 177
Query: 130 VIGTRGYSAPEYISICVLNEKSNVFSFGAFLFELLAG 166
+ GT + APE ++ L +++++S G + LL+G
Sbjct: 178 IFGTPEFVAPEIVNYEPLGLEADMWSIGVITYILLSG 214
>pdb|2A2A|A Chain A, High-resolution Crystallographic Analysis Of The
Autoinhibited Conformation Of A Human Death-associated
Protein Kinase
pdb|2A2A|B Chain B, High-resolution Crystallographic Analysis Of The
Autoinhibited Conformation Of A Human Death-associated
Protein Kinase
pdb|2A2A|C Chain C, High-resolution Crystallographic Analysis Of The
Autoinhibited Conformation Of A Human Death-associated
Protein Kinase
pdb|2A2A|D Chain D, High-resolution Crystallographic Analysis Of The
Autoinhibited Conformation Of A Human Death-associated
Protein Kinase
pdb|2CKE|A Chain A, Human Death-Associated Drp-1 Kinase In Complex With
Inhibitor
pdb|2CKE|B Chain B, Human Death-Associated Drp-1 Kinase In Complex With
Inhibitor
pdb|2CKE|C Chain C, Human Death-Associated Drp-1 Kinase In Complex With
Inhibitor
pdb|2CKE|D Chain D, Human Death-Associated Drp-1 Kinase In Complex With
Inhibitor
Length = 321
Score = 34.7 bits (78), Expect = 0.052, Method: Compositional matrix adjust.
Identities = 26/97 (26%), Positives = 50/97 (51%), Gaps = 10/97 (10%)
Query: 74 IVNSLAYLHFGFPRPIVLRNFKTQNILFNEENVA----KWFDFLLSISIPEGETHITTDR 129
I++ + YLH + I + K +NI+ ++N+ K DF L+ I +G +
Sbjct: 124 ILDGVNYLH---TKKIAHFDLKPENIMLLDKNIPIPHIKLIDFGLAHEIEDG---VEFKN 177
Query: 130 VIGTRGYSAPEYISICVLNEKSNVFSFGAFLFELLAG 166
+ GT + APE ++ L +++++S G + LL+G
Sbjct: 178 IFGTPEFVAPEIVNYEPLGLEADMWSIGVITYILLSG 214
>pdb|2YA9|A Chain A, Crystal Structure Of The Autoinhibited Form Of Mouse Dapk2
pdb|2YA9|B Chain B, Crystal Structure Of The Autoinhibited Form Of Mouse Dapk2
pdb|2YAA|A Chain A, Crystal Structure Of The Autoinhibited Form Of Mouse Dapk2
In Complex With Atp
pdb|2YAA|B Chain B, Crystal Structure Of The Autoinhibited Form Of Mouse Dapk2
In Complex With Atp
pdb|2YAB|A Chain A, Crystal Structure Of The Autoinhibited Form Of Mouse Dapk2
In Complex With Amp
pdb|2YAB|B Chain B, Crystal Structure Of The Autoinhibited Form Of Mouse Dapk2
In Complex With Amp
Length = 361
Score = 34.7 bits (78), Expect = 0.053, Method: Compositional matrix adjust.
Identities = 26/97 (26%), Positives = 50/97 (51%), Gaps = 10/97 (10%)
Query: 74 IVNSLAYLHFGFPRPIVLRNFKTQNILFNEENVA----KWFDFLLSISIPEGETHITTDR 129
I++ + YLH + I + K +NI+ ++N+ K DF L+ I +G +
Sbjct: 124 ILDGVNYLH---TKKIAHFDLKPENIMLLDKNIPIPHIKLIDFGLAHEIEDG---VEFKN 177
Query: 130 VIGTRGYSAPEYISICVLNEKSNVFSFGAFLFELLAG 166
+ GT + APE ++ L +++++S G + LL+G
Sbjct: 178 IFGTPEFVAPEIVNYEPLGLEADMWSIGVITYILLSG 214
>pdb|2A27|A Chain A, Human Drp-1 Kinase, W305s S308a D40 Mutant, Crystal Form
With 8 Monomers In The Asymmetric Unit
pdb|2A27|B Chain B, Human Drp-1 Kinase, W305s S308a D40 Mutant, Crystal Form
With 8 Monomers In The Asymmetric Unit
pdb|2A27|C Chain C, Human Drp-1 Kinase, W305s S308a D40 Mutant, Crystal Form
With 8 Monomers In The Asymmetric Unit
pdb|2A27|D Chain D, Human Drp-1 Kinase, W305s S308a D40 Mutant, Crystal Form
With 8 Monomers In The Asymmetric Unit
pdb|2A27|E Chain E, Human Drp-1 Kinase, W305s S308a D40 Mutant, Crystal Form
With 8 Monomers In The Asymmetric Unit
pdb|2A27|F Chain F, Human Drp-1 Kinase, W305s S308a D40 Mutant, Crystal Form
With 8 Monomers In The Asymmetric Unit
pdb|2A27|G Chain G, Human Drp-1 Kinase, W305s S308a D40 Mutant, Crystal Form
With 8 Monomers In The Asymmetric Unit
pdb|2A27|H Chain H, Human Drp-1 Kinase, W305s S308a D40 Mutant, Crystal Form
With 8 Monomers In The Asymmetric Unit
Length = 321
Score = 34.7 bits (78), Expect = 0.053, Method: Compositional matrix adjust.
Identities = 26/97 (26%), Positives = 50/97 (51%), Gaps = 10/97 (10%)
Query: 74 IVNSLAYLHFGFPRPIVLRNFKTQNILFNEENVA----KWFDFLLSISIPEGETHITTDR 129
I++ + YLH + I + K +NI+ ++N+ K DF L+ I +G +
Sbjct: 124 ILDGVNYLH---TKKIAHFDLKPENIMLLDKNIPIPHIKLIDFGLAHEIEDG---VEFKN 177
Query: 130 VIGTRGYSAPEYISICVLNEKSNVFSFGAFLFELLAG 166
+ GT + APE ++ L +++++S G + LL+G
Sbjct: 178 IFGTPEFVAPEIVNYEPLGLEADMWSIGVITYILLSG 214
>pdb|4G3C|A Chain A, Crystal Structure Of Apo Murine Nf-kappab Inducing Kinase
(nik)
pdb|4G3C|B Chain B, Crystal Structure Of Apo Murine Nf-kappab Inducing Kinase
(nik)
pdb|4G3E|A Chain A, Crystal Structure Of Murine Nf-kappab Inducing Kinase
(nik) Bound To A 6-alkynylindoline (cmp1)
pdb|4G3E|B Chain B, Crystal Structure Of Murine Nf-kappab Inducing Kinase
(nik) Bound To A 6-alkynylindoline (cmp1)
Length = 352
Score = 34.3 bits (77), Expect = 0.068, Method: Compositional matrix adjust.
Identities = 37/161 (22%), Positives = 71/161 (44%), Gaps = 8/161 (4%)
Query: 17 INNITYAAQMSHNHILKRIGCCLQTPIPILVFQSVEYGTLRDCI--FGAPLPRLKIASDI 74
+ + A +S I+ G + P + + +E G+L I G LP + +
Sbjct: 114 VEELVACAGLSSPRIVPLYGAVREGPWVNIFMELLEGGSLGQLIKQMGC-LPEDRALYYL 172
Query: 75 VNSLAYLHFGFPRPIVLRNFKTQNILFNEENV-AKWFDFLLSISI-PEG--ETHITTDRV 130
+L L + R I+ + K N+L + + A DF ++ + P+G ++ +T D +
Sbjct: 173 GQALEGLEYLHTRRILHGDVKADNVLLSSDGSRAALCDFGHALCLQPDGLGKSLLTGDYI 232
Query: 131 IGTRGYSAPEYISICVLNEKSNVFSFGAFLFELLAGRIHIW 171
GT + APE + + K +++S + +L G H W
Sbjct: 233 PGTETHMAPEVVMGKPCDAKVDIWSSCCMMLHMLNG-CHPW 272
>pdb|3LLT|A Chain A, Crystal Structure Of Pf14_0431, Kinase Domain
Length = 360
Score = 34.3 bits (77), Expect = 0.069, Method: Compositional matrix adjust.
Identities = 21/51 (41%), Positives = 27/51 (52%), Gaps = 5/51 (9%)
Query: 130 VIGTRGYSAPEYISICVLNEKSNVFSFGAFLFELLAGRIHIWDLLKDTHDH 180
+I TR Y APE I + S+++SFG L EL G LL TH+H
Sbjct: 219 IINTRQYRAPEVILNLGWDVSSDMWSFGCVLAELYTG-----SLLFRTHEH 264
>pdb|4G3G|A Chain A, Crystal Structure Of Murine Nf-kappab Inducing Kinase
(nik) V408l Bound To A 2-(aminothiazolyl)phenol (cmp3)
Length = 350
Score = 33.9 bits (76), Expect = 0.072, Method: Compositional matrix adjust.
Identities = 37/161 (22%), Positives = 71/161 (44%), Gaps = 8/161 (4%)
Query: 17 INNITYAAQMSHNHILKRIGCCLQTPIPILVFQSVEYGTLRDCI--FGAPLPRLKIASDI 74
+ + A +S I+ G + P + + +E G+L I G LP + +
Sbjct: 112 VEELVACAGLSSPRIVPLYGAVREGPWVNIFMELLEGGSLGQLIKQMGC-LPEDRALYYL 170
Query: 75 VNSLAYLHFGFPRPIVLRNFKTQNILFNEENV-AKWFDFLLSISI-PEG--ETHITTDRV 130
+L L + R I+ + K N+L + + A DF ++ + P+G ++ +T D +
Sbjct: 171 GQALEGLEYLHTRRILHGDVKADNVLLSSDGSRAALCDFGHALCLQPDGLGKSLLTGDYI 230
Query: 131 IGTRGYSAPEYISICVLNEKSNVFSFGAFLFELLAGRIHIW 171
GT + APE + + K +++S + +L G H W
Sbjct: 231 PGTETHMAPEVVMGKPCDAKVDIWSSCCMMLHMLNG-CHPW 270
>pdb|4G3F|A Chain A, Crystal Structure Of Murine Nf-kappab Inducing Kinase
(nik) Bound To A 2-(aminothiazoly)phenol (cmp2)
Length = 336
Score = 33.9 bits (76), Expect = 0.074, Method: Compositional matrix adjust.
Identities = 37/161 (22%), Positives = 71/161 (44%), Gaps = 8/161 (4%)
Query: 17 INNITYAAQMSHNHILKRIGCCLQTPIPILVFQSVEYGTLRDCI--FGAPLPRLKIASDI 74
+ + A +S I+ G + P + + +E G+L I G LP + +
Sbjct: 98 VEELVACAGLSSPRIVPLYGAVREGPWVNIFMELLEGGSLGQLIKQMGC-LPEDRALYYL 156
Query: 75 VNSLAYLHFGFPRPIVLRNFKTQNILFNEENV-AKWFDFLLSISI-PEG--ETHITTDRV 130
+L L + R I+ + K N+L + + A DF ++ + P+G ++ +T D +
Sbjct: 157 GQALEGLEYLHTRRILHGDVKADNVLLSSDGSRAALCDFGHALCLQPDGLGKSLLTGDYI 216
Query: 131 IGTRGYSAPEYISICVLNEKSNVFSFGAFLFELLAGRIHIW 171
GT + APE + + K +++S + +L G H W
Sbjct: 217 PGTETHMAPEVVMGKPCDAKVDIWSSCCMMLHMLNG-CHPW 256
>pdb|3BHH|A Chain A, Crystal Structure Of Human Calcium/calmodulin-dependent
Protein Kinase Iib Isoform 1 (camk2b)
pdb|3BHH|B Chain B, Crystal Structure Of Human Calcium/calmodulin-dependent
Protein Kinase Iib Isoform 1 (camk2b)
pdb|3BHH|C Chain C, Crystal Structure Of Human Calcium/calmodulin-dependent
Protein Kinase Iib Isoform 1 (camk2b)
pdb|3BHH|D Chain D, Crystal Structure Of Human Calcium/calmodulin-dependent
Protein Kinase Iib Isoform 1 (camk2b)
Length = 295
Score = 33.9 bits (76), Expect = 0.077, Method: Compositional matrix adjust.
Identities = 26/93 (27%), Positives = 44/93 (47%), Gaps = 7/93 (7%)
Query: 89 IVLRNFKTQNILFNEE---NVAKWFDFLLSISIPEGETHITTDRVIGTRGYSAPEYISIC 145
+V R+ K +N+L + K DF L+I + +G+ GT GY +PE +
Sbjct: 124 VVHRDLKPENLLLASKCKGAAVKLADFGLAIEV-QGDQQAWFG-FAGTPGYLSPEVLRKE 181
Query: 146 VLNEKSNVFSFGAFLFELLAGRIHIWDLLKDTH 178
+ ++++ G L+ LL G WD +D H
Sbjct: 182 AYGKPVDIWACGVILYILLVGYPPFWD--EDQH 212
>pdb|2VN9|A Chain A, Crystal Structure Of Human Calcium Calmodulin Dependent
Protein Kinase Ii Delta Isoform 1, Camkd
pdb|2VN9|B Chain B, Crystal Structure Of Human Calcium Calmodulin Dependent
Protein Kinase Ii Delta Isoform 1, Camkd
Length = 301
Score = 33.9 bits (76), Expect = 0.079, Method: Compositional matrix adjust.
Identities = 27/93 (29%), Positives = 45/93 (48%), Gaps = 7/93 (7%)
Query: 89 IVLRNFKTQNILFNEEN---VAKWFDFLLSISIPEGETHITTDRVIGTRGYSAPEYISIC 145
IV R+ K +N+L ++ K DF L+I + +G+ GT GY +PE +
Sbjct: 124 IVHRDLKPENLLLASKSKGAAVKLADFGLAIEV-QGDQQAWFG-FAGTPGYLSPEVLRKD 181
Query: 146 VLNEKSNVFSFGAFLFELLAGRIHIWDLLKDTH 178
+ ++++ G L+ LL G WD +D H
Sbjct: 182 PYGKPVDMWACGVILYILLVGYPPFWD--EDQH 212
>pdb|3G2F|A Chain A, Crystal Structure Of The Kinase Domain Of Bone
Morphogenetic Protein Receptor Type Ii (Bmpr2) At 2.35 A
Resolution
pdb|3G2F|B Chain B, Crystal Structure Of The Kinase Domain Of Bone
Morphogenetic Protein Receptor Type Ii (Bmpr2) At 2.35 A
Resolution
Length = 336
Score = 33.9 bits (76), Expect = 0.088, Method: Compositional matrix adjust.
Identities = 25/90 (27%), Positives = 37/90 (41%), Gaps = 12/90 (13%)
Query: 69 KIASDIVNSLAYLHFGFPR------PIVLRNFKTQNILFNEENVAKWFDFLLSIS----- 117
++A + LAYLH PR I R+ ++N+L + DF LS+
Sbjct: 115 RLAHSVTRGLAYLHTELPRGDHYKPAISHRDLNSRNVLVKNDGTCVISDFGLSMRLTGNR 174
Query: 118 -IPEGETHITTDRVIGTRGYSAPEYISICV 146
+ GE +GT Y APE + V
Sbjct: 175 LVRPGEEDNAAISEVGTIRYMAPEVLEGAV 204
>pdb|2WEL|A Chain A, Crystal Structure Of Su6656-Bound CalciumCALMODULIN-
Dependent Protein Kinase Ii Delta In Complex With
Calmodulin
Length = 327
Score = 33.5 bits (75), Expect = 0.097, Method: Compositional matrix adjust.
Identities = 27/93 (29%), Positives = 45/93 (48%), Gaps = 7/93 (7%)
Query: 89 IVLRNFKTQNILFNEEN---VAKWFDFLLSISIPEGETHITTDRVIGTRGYSAPEYISIC 145
IV R+ K +N+L ++ K DF L+I + +G+ GT GY +PE +
Sbjct: 124 IVHRDLKPENLLLASKSKGAAVKLADFGLAIEV-QGDQQAWFG-FAGTPGYLSPEVLRKD 181
Query: 146 VLNEKSNVFSFGAFLFELLAGRIHIWDLLKDTH 178
+ ++++ G L+ LL G WD +D H
Sbjct: 182 PYGKPVDMWACGVILYILLVGYPPFWD--EDQH 212
>pdb|1CM8|A Chain A, Phosphorylated Map Kinase P38-Gamma
pdb|1CM8|B Chain B, Phosphorylated Map Kinase P38-Gamma
Length = 367
Score = 33.5 bits (75), Expect = 0.11, Method: Compositional matrix adjust.
Identities = 38/152 (25%), Positives = 65/152 (42%), Gaps = 21/152 (13%)
Query: 74 IVNSLAYLHFGFPRPIVLRNFKTQNILFNEENVAKWFDFLLSISIPEGETHITTDRVIGT 133
++ L Y+H I+ R+ K N+ NE+ K DF L+ + ++ + V T
Sbjct: 137 MLKGLRYIHAA---GIIHRDLKPGNLAVNEDCELKILDFGLA---RQADSEMXGXVV--T 188
Query: 134 RGYSAPEYI-SICVLNEKSNVFSFGAFLFELLAGRIHIWDLLKDTHDHGCFFNEYLKNYL 192
R Y APE I + + +++S G + E++ G+ L K + DH E +K
Sbjct: 189 RWYRAPEVILNWMRYTQTVDIWSVGCIMAEMITGKT----LFKGS-DHLDQLKEIMK--- 240
Query: 193 EDKRFTGIPAPIIVQDIPCIEKEQQLHASAQL 224
TG P VQ + E + + +L
Sbjct: 241 ----VTGTPPAEFVQRLQSDEAKNYMKGLPEL 268
>pdb|4G3D|A Chain A, Crystal Structure Of Human Nf-kappab Inducing Kinase (nik)
pdb|4G3D|B Chain B, Crystal Structure Of Human Nf-kappab Inducing Kinase (nik)
pdb|4G3D|D Chain D, Crystal Structure Of Human Nf-kappab Inducing Kinase (nik)
pdb|4G3D|E Chain E, Crystal Structure Of Human Nf-kappab Inducing Kinase (nik)
Length = 371
Score = 32.7 bits (73), Expect = 0.16, Method: Compositional matrix adjust.
Identities = 28/101 (27%), Positives = 49/101 (48%), Gaps = 8/101 (7%)
Query: 75 VNSLAYLHFGFPRPIVLRNFKTQNILFNEENV-AKWFDFLLSISI-PEG--ETHITTDRV 130
+ L YLH R I+ + K N+L + + A DF ++ + P+G ++ +T D +
Sbjct: 195 LEGLEYLHS---RRILHGDVKADNVLLSSDGSHAALCDFGHAVCLQPDGLGKSLLTGDYI 251
Query: 131 IGTRGYSAPEYISICVLNEKSNVFSFGAFLFELLAGRIHIW 171
GT + APE + + K +V+S + +L G H W
Sbjct: 252 PGTETHMAPEVVLGRSCDAKVDVWSSCCMMLHMLNG-CHPW 291
>pdb|1V0O|A Chain A, Structure Of P. Falciparum Pfpk5-Indirubin-5-Sulphonate
Ligand Complex
pdb|1V0O|B Chain B, Structure Of P. Falciparum Pfpk5-Indirubin-5-Sulphonate
Ligand Complex
Length = 288
Score = 32.7 bits (73), Expect = 0.18, Method: Compositional matrix adjust.
Identities = 41/160 (25%), Positives = 70/160 (43%), Gaps = 16/160 (10%)
Query: 15 SCINNITYAAQMSHNHILKRIGCCLQTPIPILVFQSVE--YGTLRDCIFGAPLPRLKIAS 72
+ I I+ ++ H++I+K +LVF+ ++ L D G L + S
Sbjct: 46 TTIREISILKELKHSNIVKLYDVIHTKKRLVLVFEHLDQDLKKLLDVCEGG-LESVTAKS 104
Query: 73 ---DIVNSLAYLHFGFPRPIVLRNFKTQNILFNEENVAKWFDFLL--SISIPEGETHITT 127
++N +AY H R ++ R+ K QN+L N E K DF L + IP T
Sbjct: 105 FLLQLLNGIAYCH---DRRVLHRDLKPQNLLINREGELKIADFGLARAFGIP---VRKYT 158
Query: 128 DRVIGTRGYSAPEYISICVLNEKS-NVFSFGAFLFELLAG 166
V+ T Y AP+ + + +++S G E++ G
Sbjct: 159 HEVV-TLWYRAPDVLMGSKKYSTTIDIWSVGCIFAEMVNG 197
>pdb|1V0B|A Chain A, Crystal Structure Of The T198a Mutant Of Pfpk5
pdb|1V0B|B Chain B, Crystal Structure Of The T198a Mutant Of Pfpk5
Length = 288
Score = 32.7 bits (73), Expect = 0.18, Method: Compositional matrix adjust.
Identities = 41/160 (25%), Positives = 70/160 (43%), Gaps = 16/160 (10%)
Query: 15 SCINNITYAAQMSHNHILKRIGCCLQTPIPILVFQSVE--YGTLRDCIFGAPLPRLKIAS 72
+ I I+ ++ H++I+K +LVF+ ++ L D G L + S
Sbjct: 46 TTIREISILKELKHSNIVKLYDVIHTKKRLVLVFEHLDQDLKKLLDVCEGG-LESVTAKS 104
Query: 73 ---DIVNSLAYLHFGFPRPIVLRNFKTQNILFNEENVAKWFDFLL--SISIPEGETHITT 127
++N +AY H R ++ R+ K QN+L N E K DF L + IP T
Sbjct: 105 FLLQLLNGIAYCH---DRRVLHRDLKPQNLLINREGELKIADFGLARAFGIP---VRKYT 158
Query: 128 DRVIGTRGYSAPEYISICVLNEKS-NVFSFGAFLFELLAG 166
V+ T Y AP+ + + +++S G E++ G
Sbjct: 159 HEVV-TLWYRAPDVLMGSKKYSTTIDIWSVGCIFAEMVNG 197
>pdb|1OB3|A Chain A, Structure Of P. Falciparum Pfpk5
pdb|1OB3|B Chain B, Structure Of P. Falciparum Pfpk5
pdb|1V0P|A Chain A, Structure Of P. Falciparum Pfpk5-Purvalanol B Ligand
Complex
pdb|1V0P|B Chain B, Structure Of P. Falciparum Pfpk5-Purvalanol B Ligand
Complex
Length = 288
Score = 32.7 bits (73), Expect = 0.18, Method: Compositional matrix adjust.
Identities = 40/167 (23%), Positives = 71/167 (42%), Gaps = 30/167 (17%)
Query: 15 SCINNITYAAQMSHNHILKRIGCCLQTPIPILVFQSVE--YGTLRDCIFGAPLPRLKIAS 72
+ I I+ ++ H++I+K +LVF+ ++ L D G L + S
Sbjct: 46 TTIREISILKELKHSNIVKLYDVIHTKKRLVLVFEHLDQDLKKLLDVCEGG-LESVTAKS 104
Query: 73 ---DIVNSLAYLHFGFPRPIVLRNFKTQNILFNEENVAKWFDFLLS----ISIPEGETHI 125
++N +AY H R ++ R+ K QN+L N E K DF L+ I + + I
Sbjct: 105 FLLQLLNGIAYCH---DRRVLHRDLKPQNLLINREGELKIADFGLARAFGIPVRKYTHEI 161
Query: 126 TT------DRVIGTRGYSAPEYISICVLNEKSNVFSFGAFLFELLAG 166
T D ++G++ YS +++S G E++ G
Sbjct: 162 VTLWYRAPDVLMGSKKYSTT-----------IDIWSVGCIFAEMVNG 197
>pdb|3MTL|A Chain A, Crystal Structure Of The Pctaire1 Kinase In Complex With
Ind E804
Length = 324
Score = 32.7 bits (73), Expect = 0.20, Method: Compositional matrix adjust.
Identities = 27/97 (27%), Positives = 45/97 (46%), Gaps = 10/97 (10%)
Query: 74 IVNSLAYLHFGFPRPIVLRNFKTQNILFNEENVAKWFDFLL--SISIPEGETHITTDRVI 131
++ LAY H + ++ R+ K QN+L NE K DF L + SIP T D +
Sbjct: 109 LLRGLAYCH---RQKVLHRDLKPQNLLINERGELKLADFGLARAKSIPTK----TYDNEV 161
Query: 132 GTRGYSAPE-YISICVLNEKSNVFSFGAFLFELLAGR 167
T Y P+ + + + +++ G +E+ GR
Sbjct: 162 VTLWYRPPDILLGSTDYSTQIDMWGVGCIFYEMATGR 198
>pdb|2YJR|A Chain A, Structure Of F1174l Mutant Anaplastic Lymphoma Kinase
Length = 342
Score = 32.0 bits (71), Expect = 0.29, Method: Compositional matrix adjust.
Identities = 35/159 (22%), Positives = 65/159 (40%), Gaps = 23/159 (14%)
Query: 24 AQMSHNHILKRIGCCLQTPIPILVFQSVEYGTLRDCIFG-----------APLPRLKIAS 72
++++H +I++ IG LQ+ ++ + + G L+ + A L L +A
Sbjct: 103 SKLNHQNIVRCIGVSLQSLPRFILLELMAGGDLKSFLRETRPRPSQPSSLAMLDLLHVAR 162
Query: 73 DIVNSLAYL---HFGFPRPIVLRNFKTQNILF---NEENVAKWFDFLLSISIPEGETHIT 126
DI YL HF + R+ +N L VAK DF ++ I +
Sbjct: 163 DIACGCQYLEENHF------IHRDIAARNCLLTCPGPGRVAKIGDFGMARDIYRASYYRK 216
Query: 127 TDRVIGTRGYSAPEYISICVLNEKSNVFSFGAFLFELLA 165
+ + PE + K++ +SFG L+E+ +
Sbjct: 217 GGCAMLPVKWMPPEAFMEGIFTSKTDTWSFGVLLWEIFS 255
>pdb|3TBJ|A Chain A, The 1.7a Crystal Structure Of Actibind A T2 Ribonucleases
As Antitumorigenic Agents
Length = 237
Score = 32.0 bits (71), Expect = 0.29, Method: Compositional matrix adjust.
Identities = 23/86 (26%), Positives = 43/86 (50%), Gaps = 6/86 (6%)
Query: 2 KFYGHEYHRHTYGSCINNITYAAQMSHNHILKRIGCCLQTPIPILVFQSVE-YGTLRDCI 60
F+ HE+++H G+CIN I + + + + +G Q + + F++++ Y L D
Sbjct: 106 SFWEHEWNKH--GTCINTIEPSCYTDY-YAQEEVGDFFQQVVDL--FKTLDSYTALSDAG 160
Query: 61 FGAPLPRLKIASDIVNSLAYLHFGFP 86
SDI ++LA +H G+P
Sbjct: 161 ITPSEDATYKLSDIEDALAAIHDGYP 186
>pdb|3C0G|A Chain A, Cask Cam-kinase Domain- 3'-amp Complex, P1 Form
pdb|3C0G|B Chain B, Cask Cam-kinase Domain- 3'-amp Complex, P1 Form
pdb|3C0H|A Chain A, Cask Cam-Kinase Domain- Amppnp Complex, P1 Form
pdb|3C0H|B Chain B, Cask Cam-Kinase Domain- Amppnp Complex, P1 Form
pdb|3C0I|A Chain A, Cask Cam-Kinase Domain- 3'-Amp Complex, P212121 Form
Length = 351
Score = 32.0 bits (71), Expect = 0.29, Method: Compositional matrix adjust.
Identities = 26/94 (27%), Positives = 44/94 (46%), Gaps = 4/94 (4%)
Query: 74 IVNSLAYLHFGFPRPIVLRNFKTQNILF-NEENVAKWFDFLLSISIPEGETHITTDRVIG 132
I+ +L Y H I+ R+ K +L ++EN A ++I GE+ + +G
Sbjct: 139 ILEALRYCH---DNNIIHRDVKPHCVLLASKENSAPVKLGGFGVAIQLGESGLVAGGRVG 195
Query: 133 TRGYSAPEYISICVLNEKSNVFSFGAFLFELLAG 166
T + APE + + +V+ G LF LL+G
Sbjct: 196 TPHFMAPEVVKREPYGKPVDVWGCGVILFILLSG 229
>pdb|3D3Z|A Chain A, Crystal Structure Of Actibind A T2 Rnase
Length = 247
Score = 32.0 bits (71), Expect = 0.30, Method: Compositional matrix adjust.
Identities = 23/86 (26%), Positives = 43/86 (50%), Gaps = 6/86 (6%)
Query: 2 KFYGHEYHRHTYGSCINNITYAAQMSHNHILKRIGCCLQTPIPILVFQSVE-YGTLRDCI 60
F+ HE+++H G+CIN I + + + + +G Q + + F++++ Y L D
Sbjct: 106 SFWEHEWNKH--GTCINTIEPSCYTDY-YAQEEVGDFFQQVVDL--FKTLDSYTALSDAG 160
Query: 61 FGAPLPRLKIASDIVNSLAYLHFGFP 86
SDI ++LA +H G+P
Sbjct: 161 ITPSEDATYKLSDIEDALAAIHDGYP 186
>pdb|3TAC|A Chain A, Crystal Structure Of The Liprin-AlphaCASK COMPLEX
Length = 361
Score = 32.0 bits (71), Expect = 0.31, Method: Compositional matrix adjust.
Identities = 26/94 (27%), Positives = 44/94 (46%), Gaps = 4/94 (4%)
Query: 74 IVNSLAYLHFGFPRPIVLRNFKTQNILF-NEENVAKWFDFLLSISIPEGETHITTDRVIG 132
I+ +L Y H I+ R+ K +L ++EN A ++I GE+ + +G
Sbjct: 141 ILEALRYCH---DNNIIHRDVKPHCVLLASKENSAPVKLGGFGVAIQLGESGLVAGGRVG 197
Query: 133 TRGYSAPEYISICVLNEKSNVFSFGAFLFELLAG 166
T + APE + + +V+ G LF LL+G
Sbjct: 198 TPHFMAPEVVKREPYGKPVDVWGCGVILFILLSG 231
>pdb|4FNW|A Chain A, Crystal Structure Of The Apo F1174l Anaplastic Lymphoma
Kinase Catalytic Domain
Length = 327
Score = 32.0 bits (71), Expect = 0.34, Method: Compositional matrix adjust.
Identities = 35/159 (22%), Positives = 65/159 (40%), Gaps = 23/159 (14%)
Query: 24 AQMSHNHILKRIGCCLQTPIPILVFQSVEYGTLRDCIFG-----------APLPRLKIAS 72
++++H +I++ IG LQ+ ++ + + G L+ + A L L +A
Sbjct: 89 SKLNHQNIVRCIGVSLQSLPRFILLELMAGGDLKSFLRETRPRPSQPSSLAMLDLLHVAR 148
Query: 73 DIVNSLAYL---HFGFPRPIVLRNFKTQNILF---NEENVAKWFDFLLSISIPEGETHIT 126
DI YL HF + R+ +N L VAK DF ++ I +
Sbjct: 149 DIACGCQYLEENHF------IHRDIAARNCLLTCPGPGRVAKIGDFGMARDIYRASYYRK 202
Query: 127 TDRVIGTRGYSAPEYISICVLNEKSNVFSFGAFLFELLA 165
+ + PE + K++ +SFG L+E+ +
Sbjct: 203 GGCAMLPVKWMPPEAFMEGIFTSKTDTWSFGVLLWEIFS 241
>pdb|4DN5|A Chain A, Crystal Structure Of Nf-kb-inducing Kinase (nik)
pdb|4DN5|B Chain B, Crystal Structure Of Nf-kb-inducing Kinase (nik)
Length = 356
Score = 32.0 bits (71), Expect = 0.35, Method: Compositional matrix adjust.
Identities = 28/101 (27%), Positives = 48/101 (47%), Gaps = 8/101 (7%)
Query: 75 VNSLAYLHFGFPRPIVLRNFKTQNILFNEENV-AKWFDFLLSISI-PEG--ETHITTDRV 130
+ L YLH R I+ + K N+L + + A DF ++ + P+G + +T D +
Sbjct: 176 LEGLEYLHS---RRILHGDVKADNVLLSSDGSHAALCDFGHAVCLQPDGLGKDLLTGDYI 232
Query: 131 IGTRGYSAPEYISICVLNEKSNVFSFGAFLFELLAGRIHIW 171
GT + APE + + K +V+S + +L G H W
Sbjct: 233 PGTETHMAPEVVLGRSCDAKVDVWSSCCMMLHMLNG-CHPW 272
>pdb|1YRP|A Chain A, Catalytic Domain Of Human Zip Kinase Phosphorylated At
Thr265
pdb|1YRP|B Chain B, Catalytic Domain Of Human Zip Kinase Phosphorylated At
Thr265
Length = 278
Score = 31.6 bits (70), Expect = 0.43, Method: Compositional matrix adjust.
Identities = 26/97 (26%), Positives = 48/97 (49%), Gaps = 10/97 (10%)
Query: 74 IVNSLAYLHFGFPRPIVLRNFKTQNILFNEENVA----KWFDFLLSISIPEGETHITTDR 129
I++ + YLH + I + K +NI+ ++NV K DF ++ I G
Sbjct: 124 ILDGVHYLH---SKRIAHFDLKPENIMLLDKNVPNPRIKLIDFGIAHKIEAGNEF---KN 177
Query: 130 VIGTRGYSAPEYISICVLNEKSNVFSFGAFLFELLAG 166
+ GT + APE ++ L +++++S G + LL+G
Sbjct: 178 IFGTPEFVAPEIVNYEPLGLEADMWSIGVITYILLSG 214
>pdb|2YFX|A Chain A, Structure Of L1196m Mutant Anaplastic Lymphoma Kinase In
Complex With Crizotinib
Length = 327
Score = 31.6 bits (70), Expect = 0.46, Method: Compositional matrix adjust.
Identities = 35/160 (21%), Positives = 61/160 (38%), Gaps = 25/160 (15%)
Query: 24 AQMSHNHILKRIGCCLQTPIPILVFQSVEYGTLRDCIFGAPLPR------------LKIA 71
++ +H +I++ IG LQ+ +P + + G PR L +A
Sbjct: 88 SKFNHQNIVRCIGVSLQS-LPRFILMELMAGGDLKSFLRETRPRPSQPSSLAMLDLLHVA 146
Query: 72 SDIVNSLAYL---HFGFPRPIVLRNFKTQNILF---NEENVAKWFDFLLSISIPEGETHI 125
DI YL HF + R+ +N L VAK DF ++ I +
Sbjct: 147 RDIACGCQYLEENHF------IHRDIAARNCLLTCPGPGRVAKIGDFGMARDIYRASYYR 200
Query: 126 TTDRVIGTRGYSAPEYISICVLNEKSNVFSFGAFLFELLA 165
+ + PE + K++ +SFG L+E+ +
Sbjct: 201 KGGCAMLPVKWMPPEAFMEGIFTSKTDTWSFGVLLWEIFS 240
>pdb|2YHV|A Chain A, Structure Of L1196m Mutant Anaplastic Lymphoma Kinase
Length = 342
Score = 31.6 bits (70), Expect = 0.47, Method: Compositional matrix adjust.
Identities = 35/160 (21%), Positives = 61/160 (38%), Gaps = 25/160 (15%)
Query: 24 AQMSHNHILKRIGCCLQTPIPILVFQSVEYGTLRDCIFGAPLPR------------LKIA 71
++ +H +I++ IG LQ+ +P + + G PR L +A
Sbjct: 103 SKFNHQNIVRCIGVSLQS-LPRFILMELMAGGDLKSFLRETRPRPSQPSSLAMLDLLHVA 161
Query: 72 SDIVNSLAYL---HFGFPRPIVLRNFKTQNILF---NEENVAKWFDFLLSISIPEGETHI 125
DI YL HF + R+ +N L VAK DF ++ I +
Sbjct: 162 RDIACGCQYLEENHF------IHRDIAARNCLLTCPGPGRVAKIGDFGMARDIYRASYYR 215
Query: 126 TTDRVIGTRGYSAPEYISICVLNEKSNVFSFGAFLFELLA 165
+ + PE + K++ +SFG L+E+ +
Sbjct: 216 KGGCAMLPVKWMPPEAFMEGIFTSKTDTWSFGVLLWEIFS 255
>pdb|3BHY|A Chain A, Crystal Structure Of Human Death Associated Protein Kinase
3 (Dapk3) In Complex With A Beta-Carboline Ligand
pdb|3BQR|A Chain A, Crystal Structure Of Human Death Associated Protein Kinase
3 (Dapk3) In Complex With An Imidazo-Pyridazine Ligand
Length = 283
Score = 31.2 bits (69), Expect = 0.49, Method: Compositional matrix adjust.
Identities = 26/97 (26%), Positives = 48/97 (49%), Gaps = 10/97 (10%)
Query: 74 IVNSLAYLHFGFPRPIVLRNFKTQNILFNEENVA----KWFDFLLSISIPEGETHITTDR 129
I++ + YLH + I + K +NI+ ++NV K DF ++ I G
Sbjct: 117 ILDGVHYLH---SKRIAHFDLKPENIMLLDKNVPNPRIKLIDFGIAHKIEAGNEF---KN 170
Query: 130 VIGTRGYSAPEYISICVLNEKSNVFSFGAFLFELLAG 166
+ GT + APE ++ L +++++S G + LL+G
Sbjct: 171 IFGTPEFVAPEIVNYEPLGLEADMWSIGVITYILLSG 207
>pdb|2J90|A Chain A, Crystal Structure Of Human Zip Kinase In Complex With A
Tetracyclic Pyridone Inhibitor (pyridone 6)
pdb|2J90|B Chain B, Crystal Structure Of Human Zip Kinase In Complex With A
Tetracyclic Pyridone Inhibitor (pyridone 6)
Length = 304
Score = 31.2 bits (69), Expect = 0.53, Method: Compositional matrix adjust.
Identities = 26/97 (26%), Positives = 48/97 (49%), Gaps = 10/97 (10%)
Query: 74 IVNSLAYLHFGFPRPIVLRNFKTQNILFNEENVA----KWFDFLLSISIPEGETHITTDR 129
I++ + YLH + I + K +NI+ ++NV K DF ++ I G
Sbjct: 138 ILDGVHYLH---SKRIAHFDLKPENIMLLDKNVPNPRIKLIDFGIAHKIEAGNEF---KN 191
Query: 130 VIGTRGYSAPEYISICVLNEKSNVFSFGAFLFELLAG 166
+ GT + APE ++ L +++++S G + LL+G
Sbjct: 192 IFGTPEFVAPEIVNYEPLGLEADMWSIGVITYILLSG 228
>pdb|2XB7|A Chain A, Structure Of Human Anaplastic Lymphoma Kinase In Complex
With Nvp- Tae684
pdb|2XBA|A Chain A, Structure Of Human Anaplastic Lymphoma Kinase In Complex
With Pha-E429
Length = 315
Score = 31.2 bits (69), Expect = 0.56, Method: Compositional matrix adjust.
Identities = 35/159 (22%), Positives = 64/159 (40%), Gaps = 23/159 (14%)
Query: 24 AQMSHNHILKRIGCCLQTPIPILVFQSVEYGTLRDCIFG-----------APLPRLKIAS 72
++ +H +I++ IG LQ+ ++ + + G L+ + A L L +A
Sbjct: 80 SKFNHQNIVRCIGVSLQSLPRFILLELMAGGDLKSFLRETRPRPSQPSSLAMLDLLHVAR 139
Query: 73 DIVNSLAYL---HFGFPRPIVLRNFKTQNILF---NEENVAKWFDFLLSISIPEGETHIT 126
DI YL HF + R+ +N L VAK DF ++ I +
Sbjct: 140 DIACGCQYLEENHF------IHRDIAARNCLLTCPGPGRVAKIGDFGMARDIYRASYYRK 193
Query: 127 TDRVIGTRGYSAPEYISICVLNEKSNVFSFGAFLFELLA 165
+ + PE + K++ +SFG L+E+ +
Sbjct: 194 GGCAMLPVKWMPPEAFMEGIFTSKTDTWSFGVLLWEIFS 232
>pdb|4FNZ|A Chain A, Crystal Structure Of Human Anaplastic Lymphoma Kinase In
Complex With Piperidine-Carboxamide Inhibitor 2
Length = 327
Score = 31.2 bits (69), Expect = 0.58, Method: Compositional matrix adjust.
Identities = 35/159 (22%), Positives = 64/159 (40%), Gaps = 23/159 (14%)
Query: 24 AQMSHNHILKRIGCCLQTPIPILVFQSVEYGTLRDCIFG-----------APLPRLKIAS 72
++ +H +I++ IG LQ+ ++ + + G L+ + A L L +A
Sbjct: 89 SKFNHQNIVRCIGVSLQSLPRFILLELMAGGDLKSFLRETRPRPSQPSSLAMLDLLHVAR 148
Query: 73 DIVNSLAYL---HFGFPRPIVLRNFKTQNILF---NEENVAKWFDFLLSISIPEGETHIT 126
DI YL HF + R+ +N L VAK DF ++ I +
Sbjct: 149 DIACGCQYLEENHF------IHRDIAARNCLLTCPGPGRVAKIGDFGMARDIYRASYYRK 202
Query: 127 TDRVIGTRGYSAPEYISICVLNEKSNVFSFGAFLFELLA 165
+ + PE + K++ +SFG L+E+ +
Sbjct: 203 GGCAMLPVKWMPPEAFMEGIFTSKTDTWSFGVLLWEIFS 241
>pdb|2XP2|A Chain A, Structure Of The Human Anaplastic Lymphoma Kinase In
Complex With Crizotinib (Pf-02341066)
Length = 327
Score = 31.2 bits (69), Expect = 0.59, Method: Compositional matrix adjust.
Identities = 35/159 (22%), Positives = 64/159 (40%), Gaps = 23/159 (14%)
Query: 24 AQMSHNHILKRIGCCLQTPIPILVFQSVEYGTLRDCIFG-----------APLPRLKIAS 72
++ +H +I++ IG LQ+ ++ + + G L+ + A L L +A
Sbjct: 88 SKFNHQNIVRCIGVSLQSLPRFILLELMAGGDLKSFLRETRPRPSQPSSLAMLDLLHVAR 147
Query: 73 DIVNSLAYL---HFGFPRPIVLRNFKTQNILF---NEENVAKWFDFLLSISIPEGETHIT 126
DI YL HF + R+ +N L VAK DF ++ I +
Sbjct: 148 DIACGCQYLEENHF------IHRDIAARNCLLTCPGPGRVAKIGDFGMARDIYRASYYRK 201
Query: 127 TDRVIGTRGYSAPEYISICVLNEKSNVFSFGAFLFELLA 165
+ + PE + K++ +SFG L+E+ +
Sbjct: 202 GGCAMLPVKWMPPEAFMEGIFTSKTDTWSFGVLLWEIFS 240
>pdb|4FNX|A Chain A, Crystal Structure Of The Apo R1275q Anaplastic Lymphoma
Kinase Catalytic Domain
pdb|4FNY|A Chain A, Crystal Structure Of The R1275q Anaplastic Lymphoma Kinase
Catalytic Domain In Complex With A Benzoxazole Inhibitor
Length = 327
Score = 31.2 bits (69), Expect = 0.60, Method: Compositional matrix adjust.
Identities = 35/159 (22%), Positives = 64/159 (40%), Gaps = 23/159 (14%)
Query: 24 AQMSHNHILKRIGCCLQTPIPILVFQSVEYGTLRDCIFG-----------APLPRLKIAS 72
++ +H +I++ IG LQ+ ++ + + G L+ + A L L +A
Sbjct: 89 SKFNHQNIVRCIGVSLQSLPRFILLELMAGGDLKSFLRETRPRPSQPSSLAMLDLLHVAR 148
Query: 73 DIVNSLAYL---HFGFPRPIVLRNFKTQNILF---NEENVAKWFDFLLSISIPEGETHIT 126
DI YL HF + R+ +N L VAK DF ++ I +
Sbjct: 149 DIACGCQYLEENHF------IHRDIAARNCLLTCPGPGRVAKIGDFGMAQDIYRASYYRK 202
Query: 127 TDRVIGTRGYSAPEYISICVLNEKSNVFSFGAFLFELLA 165
+ + PE + K++ +SFG L+E+ +
Sbjct: 203 GGCAMLPVKWMPPEAFMEGIFTSKTDTWSFGVLLWEIFS 241
>pdb|2YJS|A Chain A, Structure Of C1156y Mutant Anaplastic Lymphoma Kinase
Length = 342
Score = 30.8 bits (68), Expect = 0.61, Method: Compositional matrix adjust.
Identities = 35/159 (22%), Positives = 64/159 (40%), Gaps = 23/159 (14%)
Query: 24 AQMSHNHILKRIGCCLQTPIPILVFQSVEYGTLRDCIFG-----------APLPRLKIAS 72
++ +H +I++ IG LQ+ ++ + + G L+ + A L L +A
Sbjct: 103 SKFNHQNIVRCIGVSLQSLPRFILLELMAGGDLKSFLRETRPRPSQPSSLAMLDLLHVAR 162
Query: 73 DIVNSLAYL---HFGFPRPIVLRNFKTQNILF---NEENVAKWFDFLLSISIPEGETHIT 126
DI YL HF + R+ +N L VAK DF ++ I +
Sbjct: 163 DIACGCQYLEENHF------IHRDIAARNCLLTCPGPGRVAKIGDFGMARDIYRASYYRK 216
Query: 127 TDRVIGTRGYSAPEYISICVLNEKSNVFSFGAFLFELLA 165
+ + PE + K++ +SFG L+E+ +
Sbjct: 217 GGCAMLPVKWMPPEAFMEGIFTSKTDTWSFGVLLWEIFS 255
>pdb|2XUU|A Chain A, Crystal Structure Of A Dap-Kinase 1 Mutant
Length = 334
Score = 30.8 bits (68), Expect = 0.62, Method: Compositional matrix adjust.
Identities = 28/97 (28%), Positives = 46/97 (47%), Gaps = 10/97 (10%)
Query: 74 IVNSLAYLHFGFPRPIVLRNFKTQNILFNEENVAK----WFDFLLSISIPEGETHITTDR 129
I+N + YLH I + K +NI+ + NV K DF L+ I G
Sbjct: 123 ILNGVYYLH---SLQIAHFDLKPENIMLLDRNVPKPRIKIIDFGLAHKIDFGNEF---KN 176
Query: 130 VIGTRGYSAPEYISICVLNEKSNVFSFGAFLFELLAG 166
+ GT + APE ++ L +++++S G + LL+G
Sbjct: 177 IFGTPAFVAPEIVNYEPLGLEADMWSIGVITYILLSG 213
>pdb|4DCE|A Chain A, Crystal Structure Of Human Anaplastic Lymphoma Kinase In
Complex With A Piperidine-Carboxamide Inhibitor
pdb|4DCE|B Chain B, Crystal Structure Of Human Anaplastic Lymphoma Kinase In
Complex With A Piperidine-Carboxamide Inhibitor
pdb|4FOD|A Chain A, Crystal Structure Of Human Anaplastic Lymphoma Kinase In
Complex With Acyliminobenzimidazole Inhibitor 36
Length = 333
Score = 30.8 bits (68), Expect = 0.64, Method: Compositional matrix adjust.
Identities = 35/159 (22%), Positives = 64/159 (40%), Gaps = 23/159 (14%)
Query: 24 AQMSHNHILKRIGCCLQTPIPILVFQSVEYGTLRDCIFG-----------APLPRLKIAS 72
++ +H +I++ IG LQ+ ++ + + G L+ + A L L +A
Sbjct: 95 SKFNHQNIVRCIGVSLQSLPRFILLELMAGGDLKSFLRETRPRPSQPSSLAMLDLLHVAR 154
Query: 73 DIVNSLAYL---HFGFPRPIVLRNFKTQNILF---NEENVAKWFDFLLSISIPEGETHIT 126
DI YL HF + R+ +N L VAK DF ++ I +
Sbjct: 155 DIACGCQYLEENHF------IHRDIAARNCLLTCPGPGRVAKIGDFGMARDIYRASYYRK 208
Query: 127 TDRVIGTRGYSAPEYISICVLNEKSNVFSFGAFLFELLA 165
+ + PE + K++ +SFG L+E+ +
Sbjct: 209 GGCAMLPVKWMPPEAFMEGIFTSKTDTWSFGVLLWEIFS 247
>pdb|3AOX|A Chain A, X-Ray Crystal Structure Of Human Anaplastic Lymphoma
Kinase In Complex With Ch5424802
Length = 344
Score = 30.8 bits (68), Expect = 0.66, Method: Compositional matrix adjust.
Identities = 35/159 (22%), Positives = 64/159 (40%), Gaps = 23/159 (14%)
Query: 24 AQMSHNHILKRIGCCLQTPIPILVFQSVEYGTLRDCIFG-----------APLPRLKIAS 72
++ +H +I++ IG LQ+ ++ + + G L+ + A L L +A
Sbjct: 105 SKFNHQNIVRCIGVSLQSLPRFILLELMAGGDLKSFLRETRPRPSQPSSLAMLDLLHVAR 164
Query: 73 DIVNSLAYL---HFGFPRPIVLRNFKTQNILF---NEENVAKWFDFLLSISIPEGETHIT 126
DI YL HF + R+ +N L VAK DF ++ I +
Sbjct: 165 DIACGCQYLEENHF------IHRDIAARNCLLTCPGPGRVAKIGDFGMARDIYRASYYRK 218
Query: 127 TDRVIGTRGYSAPEYISICVLNEKSNVFSFGAFLFELLA 165
+ + PE + K++ +SFG L+E+ +
Sbjct: 219 GGCAMLPVKWMPPEAFMEGIFTSKTDTWSFGVLLWEIFS 257
>pdb|2OBJ|A Chain A, Crystal Structure Of Human Pim-1 Kinase In Complex With
Inhibitor
pdb|3BGP|A Chain A, Human Pim-1 Complexed With A Benzoisoxazole Inhibitor Vx1
pdb|3BGQ|A Chain A, Human Pim-1 Kinase In Complex With An Triazolo Pyridazine
Inhibitor Vx2
pdb|3BGZ|A Chain A, Human Pim-1 Kinase In Complex With Diphenyl Indole
Inhibitor Vx3
Length = 333
Score = 30.8 bits (68), Expect = 0.66, Method: Compositional matrix adjust.
Identities = 26/86 (30%), Positives = 40/86 (46%), Gaps = 14/86 (16%)
Query: 89 IVLRNFKTQNILFN-EENVAKWFDFLLSISIPEGETHITTDRVI----GTRGYSAPEYIS 143
++ R+ K +NIL + K DF G + D V GTR YS PE+I
Sbjct: 183 VLHRDIKDENILIDLNRGELKLIDF--------GSGALLKDTVYTDFDGTRVYSPPEWIR 234
Query: 144 ICVLNEKS-NVFSFGAFLFELLAGRI 168
+ +S V+S G L++++ G I
Sbjct: 235 YHRYHGRSAAVWSLGILLYDMVCGDI 260
>pdb|4ALU|A Chain A, Benzofuropyrimidinone Inhibitors Of Pim-1
Length = 328
Score = 30.8 bits (68), Expect = 0.69, Method: Compositional matrix adjust.
Identities = 26/86 (30%), Positives = 40/86 (46%), Gaps = 14/86 (16%)
Query: 89 IVLRNFKTQNILFN-EENVAKWFDFLLSISIPEGETHITTDRVI----GTRGYSAPEYIS 143
++ R+ K +NIL + K DF G + D V GTR YS PE+I
Sbjct: 178 VLHRDIKDENILIDLNRGELKLIDF--------GSGALLKDTVYTDFDGTRVYSPPEWIR 229
Query: 144 ICVLNEKS-NVFSFGAFLFELLAGRI 168
+ +S V+S G L++++ G I
Sbjct: 230 YHRYHGRSAAVWSLGILLYDMVCGDI 255
>pdb|4FOB|A Chain A, Crystal Structure Of Human Anaplastic Lymphoma Kinase In
Complex With Acyliminobenzimidazole Inhibitor 1
pdb|4FOC|A Chain A, Crystal Structure Of Human Anaplastic Lymphoma Kinase In
Complex With Acyliminobenzimidazole Inhibitor 2
Length = 353
Score = 30.8 bits (68), Expect = 0.69, Method: Compositional matrix adjust.
Identities = 35/159 (22%), Positives = 64/159 (40%), Gaps = 23/159 (14%)
Query: 24 AQMSHNHILKRIGCCLQTPIPILVFQSVEYGTLRDCIFG-----------APLPRLKIAS 72
++ +H +I++ IG LQ+ ++ + + G L+ + A L L +A
Sbjct: 115 SKFNHQNIVRCIGVSLQSLPRFILLELMAGGDLKSFLRETRPRPSQPSSLAMLDLLHVAR 174
Query: 73 DIVNSLAYL---HFGFPRPIVLRNFKTQNILF---NEENVAKWFDFLLSISIPEGETHIT 126
DI YL HF + R+ +N L VAK DF ++ I +
Sbjct: 175 DIACGCQYLEENHF------IHRDIAARNCLLTCPGPGRVAKIGDFGMARDIYRASYYRK 228
Query: 127 TDRVIGTRGYSAPEYISICVLNEKSNVFSFGAFLFELLA 165
+ + PE + K++ +SFG L+E+ +
Sbjct: 229 GGCAMLPVKWMPPEAFMEGIFTSKTDTWSFGVLLWEIFS 267
>pdb|3A99|A Chain A, Structure Of Pim-1 Kinase Crystallized In The Presence Of
P27kip1 Carboxy-Terminal Peptide
Length = 320
Score = 30.8 bits (68), Expect = 0.70, Method: Compositional matrix adjust.
Identities = 26/86 (30%), Positives = 40/86 (46%), Gaps = 14/86 (16%)
Query: 89 IVLRNFKTQNILFN-EENVAKWFDFLLSISIPEGETHITTDRVI----GTRGYSAPEYIS 143
++ R+ K +NIL + K DF G + D V GTR YS PE+I
Sbjct: 170 VLHRDIKDENILIDLNRGELKLIDF--------GSGALLKDTVYTDFDGTRVYSPPEWIR 221
Query: 144 ICVLNEKS-NVFSFGAFLFELLAGRI 168
+ +S V+S G L++++ G I
Sbjct: 222 YHRYHGRSAAVWSLGILLYDMVCGDI 247
>pdb|3CXW|A Chain A, Crystal Structure Of Human Proto-Oncogene Serine Threonine
Kinase (Pim1) In Complex With A Consensus Peptide And A
Beta Carboline Ligand I
pdb|3CY2|A Chain A, Crystal Structure Of Human Proto-Oncogene Serine Threonine
Kinase (Pim1) In Complex With A Consensus Peptide And A
Beta Carboline Ligand Ii
Length = 314
Score = 30.8 bits (68), Expect = 0.71, Method: Compositional matrix adjust.
Identities = 26/86 (30%), Positives = 40/86 (46%), Gaps = 14/86 (16%)
Query: 89 IVLRNFKTQNILFN-EENVAKWFDFLLSISIPEGETHITTDRVI----GTRGYSAPEYIS 143
++ R+ K +NIL + K DF G + D V GTR YS PE+I
Sbjct: 164 VLHRDIKDENILIDLNRGELKLIDF--------GSGALLKDTVYTDFDGTRVYSPPEWIR 215
Query: 144 ICVLNEKS-NVFSFGAFLFELLAGRI 168
+ +S V+S G L++++ G I
Sbjct: 216 YHRYHGRSAAVWSLGILLYDMVCGDI 241
>pdb|2BIK|B Chain B, Human Pim1 Phosphorylated On Ser261
pdb|2BZI|B Chain B, Crystal Structure Of The Human Pim1 In Complex With A
Ruthenium Organometallic Ligand Ru2
Length = 313
Score = 30.8 bits (68), Expect = 0.72, Method: Compositional matrix adjust.
Identities = 26/86 (30%), Positives = 40/86 (46%), Gaps = 14/86 (16%)
Query: 89 IVLRNFKTQNILFN-EENVAKWFDFLLSISIPEGETHITTDRVI----GTRGYSAPEYIS 143
++ R+ K +NIL + K DF G + D V GTR YS PE+I
Sbjct: 163 VLHRDIKDENILIDLNRGELKLIDF--------GSGALLKDTVYTDFDGTRVYSPPEWIR 214
Query: 144 ICVLNEKS-NVFSFGAFLFELLAGRI 168
+ +S V+S G L++++ G I
Sbjct: 215 YHRYHGRSAAVWSLGILLYDMVCGDI 240
>pdb|3JPV|A Chain A, Crystal Structure Of Human Proto-Oncogene Serine Threonine
Kinase (Pim1) In Complex With A Consensus Peptide And A
Pyrrolo[2,3- A]carbazole Ligand
pdb|3QF9|A Chain A, Crystal Structure Of Human Proto-Oncogene Serine Threonine
Kinase (Pim1) In Complex With A Consensus Peptide And A
Furan- Thiazolidinedione Ligand
pdb|4GW8|A Chain A, Human Proto-Oncogene Serine Threonine Kinase (Pim1) In
Complex With A Consensus Peptide And Leucettine L41
Length = 313
Score = 30.8 bits (68), Expect = 0.72, Method: Compositional matrix adjust.
Identities = 26/86 (30%), Positives = 40/86 (46%), Gaps = 14/86 (16%)
Query: 89 IVLRNFKTQNILFN-EENVAKWFDFLLSISIPEGETHITTDRVI----GTRGYSAPEYIS 143
++ R+ K +NIL + K DF G + D V GTR YS PE+I
Sbjct: 164 VLHRDIKDENILIDLNRGELKLIDF--------GSGALLKDTVYTDFDGTRVYSPPEWIR 215
Query: 144 ICVLNEKS-NVFSFGAFLFELLAGRI 168
+ +S V+S G L++++ G I
Sbjct: 216 YHRYHGRSAAVWSLGILLYDMVCGDI 241
>pdb|3MA3|A Chain A, Crystal Structure Of Human Proto-Oncogene Serine Threonine
Kinase (Pim1) In Complex With A Consensus Peptide And A
Naphtho-Difuran Ligand
Length = 313
Score = 30.8 bits (68), Expect = 0.74, Method: Compositional matrix adjust.
Identities = 26/86 (30%), Positives = 40/86 (46%), Gaps = 14/86 (16%)
Query: 89 IVLRNFKTQNILFN-EENVAKWFDFLLSISIPEGETHITTDRVI----GTRGYSAPEYIS 143
++ R+ K +NIL + K DF G + D V GTR YS PE+I
Sbjct: 164 VLHRDIKDENILIDLNRGELKLIDF--------GSGALLKDTVYTDFDGTRVYSPPEWIR 215
Query: 144 ICVLNEKS-NVFSFGAFLFELLAGRI 168
+ +S V+S G L++++ G I
Sbjct: 216 YHRYHGRSAAVWSLGILLYDMVCGDI 241
>pdb|2J2I|B Chain B, Crystal Structure Of The Humab Pim1 In Complex With
Ly333531
Length = 312
Score = 30.8 bits (68), Expect = 0.74, Method: Compositional matrix adjust.
Identities = 26/86 (30%), Positives = 40/86 (46%), Gaps = 14/86 (16%)
Query: 89 IVLRNFKTQNILFN-EENVAKWFDFLLSISIPEGETHITTDRVI----GTRGYSAPEYIS 143
++ R+ K +NIL + K DF G + D V GTR YS PE+I
Sbjct: 163 VLHRDIKDENILIDLNRGELKLIDF--------GSGALLKDTVYTDFDGTRVYSPPEWIR 214
Query: 144 ICVLNEKS-NVFSFGAFLFELLAGRI 168
+ +S V+S G L++++ G I
Sbjct: 215 YHRYHGRSAAVWSLGILLYDMVCGDI 240
>pdb|2BIL|B Chain B, The Human Protein Kinase Pim1 In Complex With Its
Consensus Peptide Pimtide
pdb|2BZJ|A Chain A, Crystal Structure Of The Human Pim1 In Complex With A
Ruthenium Organometallic Ligand Ru3
pdb|2BZK|B Chain B, Crystal Structure Of The Human Pim1 In Complex With Amppnp
And Pimtide
pdb|2C3I|B Chain B, Crystal Structure Of Human Pim1 In Complex With
Imidazopyridazin I
pdb|2BZH|B Chain B, Crystal Structure Of The Human Pim1 In Complex With A
Ruthenium Organometallic Ligand Ru1
pdb|2OI4|X Chain X, Crystal Structure Of Human Pim1 In Complex With
Fluorinated Ruthenium Pyridocarbazole
pdb|3BWF|A Chain A, Crystal Structure Of The Human Pim1 In Complex With An
Osmium Compound
Length = 313
Score = 30.8 bits (68), Expect = 0.75, Method: Compositional matrix adjust.
Identities = 26/86 (30%), Positives = 40/86 (46%), Gaps = 14/86 (16%)
Query: 89 IVLRNFKTQNILFN-EENVAKWFDFLLSISIPEGETHITTDRVI----GTRGYSAPEYIS 143
++ R+ K +NIL + K DF G + D V GTR YS PE+I
Sbjct: 163 VLHRDIKDENILIDLNRGELKLIDF--------GSGALLKDTVYTDFDGTRVYSPPEWIR 214
Query: 144 ICVLNEKS-NVFSFGAFLFELLAGRI 168
+ +S V+S G L++++ G I
Sbjct: 215 YHRYHGRSAAVWSLGILLYDMVCGDI 240
>pdb|2XIX|A Chain A, Protein Kinase Pim-1 In Complex With Fragment-1 From
Crystallographic Fragment Screen
Length = 301
Score = 30.8 bits (68), Expect = 0.75, Method: Compositional matrix adjust.
Identities = 26/86 (30%), Positives = 40/86 (46%), Gaps = 14/86 (16%)
Query: 89 IVLRNFKTQNILFN-EENVAKWFDFLLSISIPEGETHITTDRVI----GTRGYSAPEYIS 143
++ R+ K +NIL + K DF G + D V GTR YS PE+I
Sbjct: 151 VLHRDIKDENILIDLNRGELKLIDF--------GSGALLKDTVYTDFDGTRVYSPPEWIR 202
Query: 144 ICVLNEKS-NVFSFGAFLFELLAGRI 168
+ +S V+S G L++++ G I
Sbjct: 203 YHRYHGRSAAVWSLGILLYDMVCGDI 228
>pdb|3LL6|A Chain A, Crystal Structure Of The Human Cyclin G Associated Kinase
(gak)
pdb|3LL6|B Chain B, Crystal Structure Of The Human Cyclin G Associated Kinase
(gak)
Length = 337
Score = 30.8 bits (68), Expect = 0.75, Method: Compositional matrix adjust.
Identities = 31/121 (25%), Positives = 53/121 (43%), Gaps = 21/121 (17%)
Query: 68 LKIASDIVNSLAYLHFGFPRPIVLRNFKTQNILFNEENVAKWFDFLLSISIPE------- 120
LKI ++ ++H P PI+ R+ K +N+L + + K DF + +I
Sbjct: 139 LKIFYQTCRAVQHMHRQKP-PIIHRDLKVENLLLSNQGTIKLCDFGSATTISHYPDYSWS 197
Query: 121 ------GETHITTDRVIGTRGYSAPEYISICV---LNEKSNVFSFGAFLFELLAGRIHIW 171
E IT + T Y PE I + + EK ++++ G L+ LL R H +
Sbjct: 198 AQRRALVEEEITRNT---TPMYRTPEIIDLYSNFPIGEKQDIWALGCILY-LLCFRQHPF 253
Query: 172 D 172
+
Sbjct: 254 E 254
>pdb|3CY3|A Chain A, Crystal Structure Of Human Proto-Oncogene Serine Threonine
Kinase (Pim1) In Complex With A Consensus Peptide And
The Jnk Inhibitor V
Length = 314
Score = 30.8 bits (68), Expect = 0.75, Method: Compositional matrix adjust.
Identities = 26/86 (30%), Positives = 40/86 (46%), Gaps = 14/86 (16%)
Query: 89 IVLRNFKTQNILFN-EENVAKWFDFLLSISIPEGETHITTDRVI----GTRGYSAPEYIS 143
++ R+ K +NIL + K DF G + D V GTR YS PE+I
Sbjct: 164 VLHRDIKDENILIDLNRGELKLIDF--------GSGALLKDTVYTDFDGTRVYSPPEWIR 215
Query: 144 ICVLNEKS-NVFSFGAFLFELLAGRI 168
+ +S V+S G L++++ G I
Sbjct: 216 YHRYHGRSAAVWSLGILLYDMVCGDI 241
>pdb|1XWS|A Chain A, Crystal Structure Of The Human Pim1 Kinase Domain
Length = 313
Score = 30.8 bits (68), Expect = 0.75, Method: Compositional matrix adjust.
Identities = 26/86 (30%), Positives = 40/86 (46%), Gaps = 14/86 (16%)
Query: 89 IVLRNFKTQNILFN-EENVAKWFDFLLSISIPEGETHITTDRVI----GTRGYSAPEYIS 143
++ R+ K +NIL + K DF G + D V GTR YS PE+I
Sbjct: 163 VLHRDIKDENILIDLNRGELKLIDF--------GSGALLKDTVYTDFDGTRVYSPPEWIR 214
Query: 144 ICVLNEKS-NVFSFGAFLFELLAGRI 168
+ +S V+S G L++++ G I
Sbjct: 215 YHRYHGRSAAVWSLGILLYDMVCGDI 240
>pdb|2XIY|A Chain A, Protein Kinase Pim-1 In Complex With Fragment-2 From
Crystallographic Fragment Screen
pdb|2XIZ|A Chain A, Protein Kinase Pim-1 In Complex With Fragment-3 From
Crystallographic Fragment Screen
pdb|2XJ1|A Chain A, Protein Kinase Pim-1 In Complex With Small Molecule
Inibitor
pdb|2XJ2|A Chain A, Protein Kinase Pim-1 In Complex With Small Molecule
Inhibitor
Length = 301
Score = 30.8 bits (68), Expect = 0.76, Method: Compositional matrix adjust.
Identities = 26/86 (30%), Positives = 40/86 (46%), Gaps = 14/86 (16%)
Query: 89 IVLRNFKTQNILFN-EENVAKWFDFLLSISIPEGETHITTDRVI----GTRGYSAPEYIS 143
++ R+ K +NIL + K DF G + D V GTR YS PE+I
Sbjct: 151 VLHRDIKDENILIDLNRGELKLIDF--------GSGALLKDTVYTDFDGTRVYSPPEWIR 202
Query: 144 ICVLNEKS-NVFSFGAFLFELLAGRI 168
+ +S V+S G L++++ G I
Sbjct: 203 YHRYHGRSAAVWSLGILLYDMVCGDI 228
>pdb|1XQZ|A Chain A, Crystal Structure Of Hpim-1 Kinase At 2.1 A Resolution
pdb|1XR1|A Chain A, Crystal Structure Of Hpim-1 Kinase In Complex With Amp-Pnp
At 2.1 A Resolution
Length = 300
Score = 30.8 bits (68), Expect = 0.77, Method: Compositional matrix adjust.
Identities = 26/86 (30%), Positives = 40/86 (46%), Gaps = 14/86 (16%)
Query: 89 IVLRNFKTQNILFN-EENVAKWFDFLLSISIPEGETHITTDRVI----GTRGYSAPEYIS 143
++ R+ K +NIL + K DF G + D V GTR YS PE+I
Sbjct: 150 VLHRDIKDENILIDLNRGELKLIDF--------GSGALLKDTVYTDFDGTRVYSPPEWIR 201
Query: 144 ICVLNEKS-NVFSFGAFLFELLAGRI 168
+ +S V+S G L++++ G I
Sbjct: 202 YHRYHGRSAAVWSLGILLYDMVCGDI 227
>pdb|2XJ0|A Chain A, Protein Kinase Pim-1 In Complex With Fragment-4 From
Crystallographic Fragment Screen
Length = 301
Score = 30.8 bits (68), Expect = 0.77, Method: Compositional matrix adjust.
Identities = 26/86 (30%), Positives = 40/86 (46%), Gaps = 14/86 (16%)
Query: 89 IVLRNFKTQNILFN-EENVAKWFDFLLSISIPEGETHITTDRVI----GTRGYSAPEYIS 143
++ R+ K +NIL + K DF G + D V GTR YS PE+I
Sbjct: 151 VLHRDIKDENILIDLNRGELKLIDF--------GSGALLKDTVYTDFDGTRVYSPPEWIR 202
Query: 144 ICVLNEKS-NVFSFGAFLFELLAGRI 168
+ +S V+S G L++++ G I
Sbjct: 203 YHRYHGRSAAVWSLGILLYDMVCGDI 228
>pdb|3DCV|A Chain A, Crystal Structure Of Human Pim1 Kinase Complexed With
4-(4-
Hydroxy-3-Methyl-Phenyl)-6-Phenylpyrimidin-2(1h)-One
pdb|3T9I|A Chain A, Pim1 Complexed With A Novel 3,6-Disubstituted Indole At
2.6 Ang Resolution
Length = 328
Score = 30.8 bits (68), Expect = 0.77, Method: Compositional matrix adjust.
Identities = 26/86 (30%), Positives = 40/86 (46%), Gaps = 14/86 (16%)
Query: 89 IVLRNFKTQNILFN-EENVAKWFDFLLSISIPEGETHITTDRVI----GTRGYSAPEYIS 143
++ R+ K +NIL + K DF G + D V GTR YS PE+I
Sbjct: 178 VLHRDIKDENILIDLNRGELKLIDF--------GSGALLKDTVYTDFDGTRVYSPPEWIR 229
Query: 144 ICVLNEKS-NVFSFGAFLFELLAGRI 168
+ +S V+S G L++++ G I
Sbjct: 230 YHRYHGRSAAVWSLGILLYDMVCGDI 255
>pdb|3F2A|A Chain A, Crystal Structure Of Human Pim-1 In Complex With Dappa
Length = 300
Score = 30.8 bits (68), Expect = 0.78, Method: Compositional matrix adjust.
Identities = 26/86 (30%), Positives = 40/86 (46%), Gaps = 14/86 (16%)
Query: 89 IVLRNFKTQNILFN-EENVAKWFDFLLSISIPEGETHITTDRVI----GTRGYSAPEYIS 143
++ R+ K +NIL + K DF G + D V GTR YS PE+I
Sbjct: 150 VLHRDIKDENILIDLNRGELKLIDF--------GSGALLKDTVYTDFDGTRVYSPPEWIR 201
Query: 144 ICVLNEKS-NVFSFGAFLFELLAGRI 168
+ +S V+S G L++++ G I
Sbjct: 202 YHRYHGRSAAVWSLGILLYDMVCGDI 227
>pdb|4ALV|A Chain A, Benzofuropyrimidinone Inhibitors Of Pim-1
pdb|4ALW|A Chain A, Benzofuropyrimidinone Inhibitors Of Pim-1
Length = 328
Score = 30.4 bits (67), Expect = 0.81, Method: Compositional matrix adjust.
Identities = 26/86 (30%), Positives = 40/86 (46%), Gaps = 14/86 (16%)
Query: 89 IVLRNFKTQNILFN-EENVAKWFDFLLSISIPEGETHITTDRVI----GTRGYSAPEYIS 143
++ R+ K +NIL + K DF G + D V GTR YS PE+I
Sbjct: 178 VLHRDIKDENILIDLNRGELKLIDF--------GSGALLKDTVYTDFDGTRVYSPPEWIR 229
Query: 144 ICVLNEKS-NVFSFGAFLFELLAGRI 168
+ +S V+S G L++++ G I
Sbjct: 230 YHRYHGRSAAVWSLGILLYDMVCGDI 255
>pdb|2W4J|A Chain A, X-Ray Structure Of A Dap-Kinase 2-277
Length = 277
Score = 30.4 bits (67), Expect = 0.81, Method: Compositional matrix adjust.
Identities = 28/97 (28%), Positives = 46/97 (47%), Gaps = 10/97 (10%)
Query: 74 IVNSLAYLHFGFPRPIVLRNFKTQNILFNEENVAK----WFDFLLSISIPEGETHITTDR 129
I+N + YLH I + K +NI+ + NV K DF L+ I G
Sbjct: 123 ILNGVYYLH---SLQIAHFDLKPENIMLLDRNVPKPRIKIIDFGLAHKIDFGNEF---KN 176
Query: 130 VIGTRGYSAPEYISICVLNEKSNVFSFGAFLFELLAG 166
+ GT + APE ++ L +++++S G + LL+G
Sbjct: 177 IFGTPEFVAPEIVNYEPLGLEADMWSIGVITYILLSG 213
>pdb|4A7C|A Chain A, Crystal Structure Of Pim1 Kinase With Etp46546
Length = 308
Score = 30.4 bits (67), Expect = 0.83, Method: Compositional matrix adjust.
Identities = 26/86 (30%), Positives = 40/86 (46%), Gaps = 14/86 (16%)
Query: 89 IVLRNFKTQNILFN-EENVAKWFDFLLSISIPEGETHITTDRVI----GTRGYSAPEYIS 143
++ R+ K +NIL + K DF G + D V GTR YS PE+I
Sbjct: 158 VLHRDIKDENILIDLNRGELKLIDF--------GSGALLKDTVYTDFDGTRVYSPPEWIR 209
Query: 144 ICVLNEKS-NVFSFGAFLFELLAGRI 168
+ +S V+S G L++++ G I
Sbjct: 210 YHRYHGRSAAVWSLGILLYDMVCGDI 235
>pdb|2YAK|A Chain A, Structure Of Death-Associated Protein Kinase 1 (Dapk1) In
Complex With A Ruthenium Octasporine Ligand (Osv)
pdb|2Y4P|A Chain A, Dimeric Structure Of Dapk-1 Catalytic Domain
pdb|2Y4P|B Chain B, Dimeric Structure Of Dapk-1 Catalytic Domain
pdb|2Y4P|C Chain C, Dimeric Structure Of Dapk-1 Catalytic Domain
pdb|2Y4P|D Chain D, Dimeric Structure Of Dapk-1 Catalytic Domain
pdb|3ZXT|A Chain A, Dimeric Structure Of Dapk-1 Catalytic Domain In Complex
With Amppcp-Mg
pdb|3ZXT|B Chain B, Dimeric Structure Of Dapk-1 Catalytic Domain In Complex
With Amppcp-Mg
pdb|3ZXT|C Chain C, Dimeric Structure Of Dapk-1 Catalytic Domain In Complex
With Amppcp-Mg
pdb|3ZXT|D Chain D, Dimeric Structure Of Dapk-1 Catalytic Domain In Complex
With Amppcp-Mg
Length = 285
Score = 30.4 bits (67), Expect = 0.83, Method: Compositional matrix adjust.
Identities = 28/97 (28%), Positives = 46/97 (47%), Gaps = 10/97 (10%)
Query: 74 IVNSLAYLHFGFPRPIVLRNFKTQNILFNEENVAK----WFDFLLSISIPEGETHITTDR 129
I+N + YLH I + K +NI+ + NV K DF L+ I G
Sbjct: 123 ILNGVYYLH---SLQIAHFDLKPENIMLLDRNVPKPRIKIIDFGLAHKIDFGNEF---KN 176
Query: 130 VIGTRGYSAPEYISICVLNEKSNVFSFGAFLFELLAG 166
+ GT + APE ++ L +++++S G + LL+G
Sbjct: 177 IFGTPEFVAPEIVNYEPLGLEADMWSIGVITYILLSG 213
>pdb|1IG1|A Chain A, 1.8a X-Ray Structure Of Ternary Complex Of A Catalytic
Domain Of Death-Associated Protein Kinase With Atp
Analogue And Mn.
pdb|1JKL|A Chain A, 1.6a X-Ray Structure Of Binary Complex Of A Catalytic
Domain Of Death-Associated Protein Kinase With Atp
Analogue
pdb|1JKS|A Chain A, 1.5a X-Ray Structure Of Apo Form Of A Catalytic Domain Of
Death-Associated Protein Kinase
pdb|1JKT|A Chain A, Tetragonal Crystal Form Of A Catalytic Domain Of
Death-Associated Protein Kinase
pdb|1JKT|B Chain B, Tetragonal Crystal Form Of A Catalytic Domain Of
Death-Associated Protein Kinase
pdb|1JKK|A Chain A, 2.4a X-Ray Structure Of Ternary Complex Of A Catalytic
Domain Of Death-Associated Protein Kinase With Atp
Analogue And Mg.
pdb|3F5G|A Chain A, Crystal Structure Of Death Associated Protein Kinase In
Complex With Adp And Mg2+
pdb|3EH9|A Chain A, Crystal Structure Of Death Associated Protein Kinase
Complexed With Adp
pdb|3EHA|A Chain A, Crystal Structure Of Death Associated Protein Kinase
Complexed With Amppnp
Length = 294
Score = 30.4 bits (67), Expect = 0.83, Method: Compositional matrix adjust.
Identities = 28/97 (28%), Positives = 46/97 (47%), Gaps = 10/97 (10%)
Query: 74 IVNSLAYLHFGFPRPIVLRNFKTQNILFNEENVAK----WFDFLLSISIPEGETHITTDR 129
I+N + YLH I + K +NI+ + NV K DF L+ I G
Sbjct: 122 ILNGVYYLH---SLQIAHFDLKPENIMLLDRNVPKPRIKIIDFGLAHKIDFGNEF---KN 175
Query: 130 VIGTRGYSAPEYISICVLNEKSNVFSFGAFLFELLAG 166
+ GT + APE ++ L +++++S G + LL+G
Sbjct: 176 IFGTPEFVAPEIVNYEPLGLEADMWSIGVITYILLSG 212
>pdb|3GU8|A Chain A, Crystal Structure Of Dapkl93g With N6-Cyclopentyladenosine
pdb|3GUB|A Chain A, Crystal Structure Of Dapkl93g Complexed With N6-(2-
Phenylethyl)adenosine
Length = 295
Score = 30.4 bits (67), Expect = 0.83, Method: Compositional matrix adjust.
Identities = 28/97 (28%), Positives = 46/97 (47%), Gaps = 10/97 (10%)
Query: 74 IVNSLAYLHFGFPRPIVLRNFKTQNILFNEENVAK----WFDFLLSISIPEGETHITTDR 129
I+N + YLH I + K +NI+ + NV K DF L+ I G
Sbjct: 123 ILNGVYYLH---SLQIAHFDLKPENIMLLDRNVPKPRIKIIDFGLAHKIDFGNEF---KN 176
Query: 130 VIGTRGYSAPEYISICVLNEKSNVFSFGAFLFELLAG 166
+ GT + APE ++ L +++++S G + LL+G
Sbjct: 177 IFGTPEFVAPEIVNYEPLGLEADMWSIGVITYILLSG 213
>pdb|3F5U|A Chain A, Crystal Structure Of The Death Associated Protein Kinase
In Complex With Amppnp And Mg2+
Length = 295
Score = 30.4 bits (67), Expect = 0.83, Method: Compositional matrix adjust.
Identities = 28/97 (28%), Positives = 46/97 (47%), Gaps = 10/97 (10%)
Query: 74 IVNSLAYLHFGFPRPIVLRNFKTQNILFNEENVAK----WFDFLLSISIPEGETHITTDR 129
I+N + YLH I + K +NI+ + NV K DF L+ I G
Sbjct: 123 ILNGVYYLH---SLQIAHFDLKPENIMLLDRNVPKPRIKIIDFGLAHKIDFGNEF---KN 176
Query: 130 VIGTRGYSAPEYISICVLNEKSNVFSFGAFLFELLAG 166
+ GT + APE ++ L +++++S G + LL+G
Sbjct: 177 IFGTPEFVAPEIVNYEPLGLEADMWSIGVITYILLSG 213
>pdb|1P4F|A Chain A, Death Associated Protein Kinase Catalytic Domain With
Bound Inhibitor Fragment
Length = 293
Score = 30.4 bits (67), Expect = 0.84, Method: Compositional matrix adjust.
Identities = 28/97 (28%), Positives = 46/97 (47%), Gaps = 10/97 (10%)
Query: 74 IVNSLAYLHFGFPRPIVLRNFKTQNILFNEENVAK----WFDFLLSISIPEGETHITTDR 129
I+N + YLH I + K +NI+ + NV K DF L+ I G
Sbjct: 122 ILNGVYYLH---SLQIAHFDLKPENIMLLDRNVPKPRIKIIDFGLAHKIDFGNEF---KN 175
Query: 130 VIGTRGYSAPEYISICVLNEKSNVFSFGAFLFELLAG 166
+ GT + APE ++ L +++++S G + LL+G
Sbjct: 176 IFGTPEFVAPEIVNYEPLGLEADMWSIGVITYILLSG 212
>pdb|3GU4|A Chain A, Crystal Structure Of Dapkq23v-Amppnp
pdb|3GU5|A Chain A, Crystal Structure Of Dapkq23v-Amppnp-Mg2+
pdb|3GU6|A Chain A, Crystal Structure Of Dapkq23v-Adp
pdb|3GU7|A Chain A, Crystal Structure Of Dapkq23v-Adp-Mg2+
Length = 295
Score = 30.4 bits (67), Expect = 0.84, Method: Compositional matrix adjust.
Identities = 28/97 (28%), Positives = 46/97 (47%), Gaps = 10/97 (10%)
Query: 74 IVNSLAYLHFGFPRPIVLRNFKTQNILFNEENVAK----WFDFLLSISIPEGETHITTDR 129
I+N + YLH I + K +NI+ + NV K DF L+ I G
Sbjct: 123 ILNGVYYLH---SLQIAHFDLKPENIMLLDRNVPKPRIKIIDFGLAHKIDFGNEF---KN 176
Query: 130 VIGTRGYSAPEYISICVLNEKSNVFSFGAFLFELLAG 166
+ GT + APE ++ L +++++S G + LL+G
Sbjct: 177 IFGTPEFVAPEIVNYEPLGLEADMWSIGVITYILLSG 213
>pdb|3R00|A Chain A, The Discovery Of Novel Benzofuran-2-Carboxylic Acids As
Potent Pim-1 Inhibitors
pdb|3R01|A Chain A, The Discovery Of Novel Benzofuran-2-Carboxylic Acids As
Potent Pim-1 Inhibitors
pdb|3R02|A Chain A, The Discovery Of Novel Benzofuran-2-Carboxylic Acids As
Potent Pim-1 Inhibitors
pdb|3R04|A Chain A, The Discovery Of Novel Benzofuran-2-Carboxylic Acids As
Potent Pim-1 Inhibitors
pdb|3VBQ|A Chain A, Exploitation Of Hydrogen Bonding Constraints And Flat
Hydrophobic Energy Landscapes In Pim-1 Kinase Needle
Screening And Inhibitor Design
pdb|3VBT|A Chain A, Exploitation Of Hydrogen Bonding Constraints And Flat
Hydrophobic Energy Landscapes In Pim-1 Kinase Needle
Screening And Inhibitor Design
pdb|3VBV|A Chain A, Exploitation Of Hydrogen Bonding Constraints And Flat
Hydrophobic Energy Landscapes In Pim-1 Kinase Needle
Screening And Inhibitor Design
pdb|3VBW|A Chain A, Exploitation Of Hydrogen Bonding Constraints And Flat
Hydrophobic Energy Landscapes In Pim-1 Kinase Needle
Screening And Inhibitor Design
pdb|3VBX|A Chain A, Exploitation Of Hydrogen Bonding Constraints And Flat
Hydrophobic Energy Landscapes In Pim-1 Kinase Needle
Screening And Inhibitor Design
pdb|3VBY|A Chain A, Exploitation Of Hydrogen Bonding Constraints And Flat
Hydrophobic Energy Landscapes In Pim-1 Kinase Needle
Screening And Inhibitor Design
pdb|3VC4|A Chain A, Exploitation Of Hydrogen Bonding Constraints And Flat
Hydrophobic Energy Landscapes In Pim-1 Kinase Needle
Screening And Inhibitor Design
Length = 299
Score = 30.4 bits (67), Expect = 0.85, Method: Compositional matrix adjust.
Identities = 26/86 (30%), Positives = 40/86 (46%), Gaps = 14/86 (16%)
Query: 89 IVLRNFKTQNILFN-EENVAKWFDFLLSISIPEGETHITTDRVI----GTRGYSAPEYIS 143
++ R+ K +NIL + K DF G + D V GTR YS PE+I
Sbjct: 136 VLHRDIKDENILIDLNRGELKLIDF--------GSGALLKDTVYTDFDGTRVYSPPEWIR 187
Query: 144 ICVLNEKS-NVFSFGAFLFELLAGRI 168
+ +S V+S G L++++ G I
Sbjct: 188 YHRYHGRSAAVWSLGILLYDMVCGDI 213
>pdb|1WVW|A Chain A, Crystal Structures Of Kinase Domain Of Dap Kinase In
Complex With Small Molecular Inhibitors
pdb|1WVX|A Chain A, Crystal Structures Of Kinase Domain Of Dap Kinase In
Complex With Small Molecular Inhibitors
pdb|1WVY|A Chain A, Crystal Structures Of Kinase Domain Of Dap Kinase In
Complex With Small Molecular Inhibitors
Length = 278
Score = 30.4 bits (67), Expect = 0.85, Method: Compositional matrix adjust.
Identities = 28/97 (28%), Positives = 46/97 (47%), Gaps = 10/97 (10%)
Query: 74 IVNSLAYLHFGFPRPIVLRNFKTQNILFNEENVAK----WFDFLLSISIPEGETHITTDR 129
I+N + YLH I + K +NI+ + NV K DF L+ I G
Sbjct: 123 ILNGVYYLH---SLQIAHFDLKPENIMLLDRNVPKPRIKIIDFGLAHKIDFGNEF---KN 176
Query: 130 VIGTRGYSAPEYISICVLNEKSNVFSFGAFLFELLAG 166
+ GT + APE ++ L +++++S G + LL+G
Sbjct: 177 IFGTPEFVAPEIVNYEPLGLEADMWSIGVITYILLSG 213
>pdb|1YWV|A Chain A, Crystal Structures Of Proto-Oncogene Kinase Pim1: A Target
Of Aberrant Somatic Hypermutations In Diffuse Large Cell
Lymphoma
pdb|1YXT|A Chain A, Crystal Structure Of Kinase Pim1 In Complex With Amppnp
pdb|1YXU|A Chain A, Crystal Structure Of Kinase Pim1 In Complex With Amp
pdb|1YXU|B Chain B, Crystal Structure Of Kinase Pim1 In Complex With Amp
pdb|1YXU|C Chain C, Crystal Structure Of Kinase Pim1 In Complex With Amp
pdb|1YXU|D Chain D, Crystal Structure Of Kinase Pim1 In Complex With Amp
pdb|1YXV|A Chain A, Crystal Structure Of Kinase Pim1 In Complex With
3,4-Dihydroxy-1- Methylquinolin-2(1h)-One
pdb|1YXX|A Chain A, Crystal Structure Of Kinase Pim1 In Complex With
(3e)-3-[(4- Hydroxyphenyl)imino]-1h-Indol-2(3h)-One
pdb|2O3P|A Chain A, Crystal Structure Of Pim1 With Quercetin
pdb|2O63|A Chain A, Crystal Structure Of Pim1 With Myricetin
pdb|2O64|A Chain A, Crystal Structure Of Pim1 With Quercetagetin
pdb|2O65|A Chain A, Crystal Structure Of Pim1 With Pentahydroxyflavone
Length = 293
Score = 30.4 bits (67), Expect = 0.86, Method: Compositional matrix adjust.
Identities = 26/86 (30%), Positives = 40/86 (46%), Gaps = 14/86 (16%)
Query: 89 IVLRNFKTQNILFN-EENVAKWFDFLLSISIPEGETHITTDRVI----GTRGYSAPEYIS 143
++ R+ K +NIL + K DF G + D V GTR YS PE+I
Sbjct: 135 VLHRDIKDENILIDLNRGELKLIDF--------GSGALLKDTVYTDFDGTRVYSPPEWIR 186
Query: 144 ICVLNEKS-NVFSFGAFLFELLAGRI 168
+ +S V+S G L++++ G I
Sbjct: 187 YHRYHGRSAAVWSLGILLYDMVCGDI 212
>pdb|3DFC|B Chain B, Crystal Structure Of A Glycine-Rich Loop Mutant Of The
Death Associated Protein Kinase Catalytic Domain With
Amppnp
pdb|3DGK|A Chain A, Crystal Structure Of A Glycine-Rich Loop Mutant Of The
Death Associated Protein Kinase Catalytic Domain
Length = 295
Score = 30.4 bits (67), Expect = 0.86, Method: Compositional matrix adjust.
Identities = 28/97 (28%), Positives = 46/97 (47%), Gaps = 10/97 (10%)
Query: 74 IVNSLAYLHFGFPRPIVLRNFKTQNILFNEENVAK----WFDFLLSISIPEGETHITTDR 129
I+N + YLH I + K +NI+ + NV K DF L+ I G
Sbjct: 123 ILNGVYYLH---SLQIAHFDLKPENIMLLDRNVPKPRIKIIDFGLAHKIDFGNEF---KN 176
Query: 130 VIGTRGYSAPEYISICVLNEKSNVFSFGAFLFELLAG 166
+ GT + APE ++ L +++++S G + LL+G
Sbjct: 177 IFGTPEFVAPEIVNYEPLGLEADMWSIGVITYILLSG 213
>pdb|3JXW|A Chain A, Discovery Of 3h-Benzo[4,5]thieno[3,2-D]pyrimidin-4-Ones As
Potent, Highly Selective And Orally Bioavailable Pim
Kinases Inhibitors
pdb|3JY0|A Chain A, Discovery Of 3h-Benzo[4,5]thieno[3,2-D]pyrimidin-4-Ones As
Potent, Highly Selective And Orally Bioavailable Pim
Kinases Inhibitors
pdb|3JYA|A Chain A, Discovery Of 3h-Benzo[4,5]thieno[3,2-D]pyrimidin-4-Ones As
Potent, Highly Selective And Orally Bioavailable Pim
Kinases Inhibitors
Length = 294
Score = 30.4 bits (67), Expect = 0.87, Method: Compositional matrix adjust.
Identities = 26/86 (30%), Positives = 40/86 (46%), Gaps = 14/86 (16%)
Query: 89 IVLRNFKTQNILFN-EENVAKWFDFLLSISIPEGETHITTDRVI----GTRGYSAPEYIS 143
++ R+ K +NIL + K DF G + D V GTR YS PE+I
Sbjct: 136 VLHRDIKDENILIDLNRGELKLIDF--------GSGALLKDTVYTDFDGTRVYSPPEWIR 187
Query: 144 ICVLNEKS-NVFSFGAFLFELLAGRI 168
+ +S V+S G L++++ G I
Sbjct: 188 YHRYHGRSAAVWSLGILLYDMVCGDI 213
>pdb|3C4E|A Chain A, Pim-1 Kinase Domain In Complex With 3-Aminophenyl-7-
Azaindole
pdb|3C4E|B Chain B, Pim-1 Kinase Domain In Complex With 3-Aminophenyl-7-
Azaindole
pdb|3C4E|C Chain C, Pim-1 Kinase Domain In Complex With 3-Aminophenyl-7-
Azaindole
pdb|3C4E|D Chain D, Pim-1 Kinase Domain In Complex With 3-Aminophenyl-7-
Azaindole
Length = 273
Score = 30.4 bits (67), Expect = 0.92, Method: Compositional matrix adjust.
Identities = 26/86 (30%), Positives = 40/86 (46%), Gaps = 14/86 (16%)
Query: 89 IVLRNFKTQNILFN-EENVAKWFDFLLSISIPEGETHITTDRVI----GTRGYSAPEYIS 143
++ R+ K +NIL + K DF G + D V GTR YS PE+I
Sbjct: 131 VLHRDIKDENILIDLNRGELKLIDF--------GSGALLKDTVYTDFDGTRVYSPPEWIR 182
Query: 144 ICVLNEKS-NVFSFGAFLFELLAGRI 168
+ +S V+S G L++++ G I
Sbjct: 183 YHRYHGRSAAVWSLGILLYDMVCGDI 208
>pdb|1YXS|A Chain A, Crystal Structure Of Kinase Pim1 With P123m Mutation
Length = 293
Score = 30.4 bits (67), Expect = 0.93, Method: Compositional matrix adjust.
Identities = 26/86 (30%), Positives = 40/86 (46%), Gaps = 14/86 (16%)
Query: 89 IVLRNFKTQNILFN-EENVAKWFDFLLSISIPEGETHITTDRVI----GTRGYSAPEYIS 143
++ R+ K +NIL + K DF G + D V GTR YS PE+I
Sbjct: 135 VLHRDIKDENILIDLNRGELKLIDF--------GSGALLKDTVYTDFDGTRVYSPPEWIR 186
Query: 144 ICVLNEKS-NVFSFGAFLFELLAGRI 168
+ +S V+S G L++++ G I
Sbjct: 187 YHRYHGRSAAVWSLGILLYDMVCGDI 212
>pdb|4AS0|A Chain A, Cyclometalated Phthalimides As Protein Kinase Inhibitors
Length = 273
Score = 30.4 bits (67), Expect = 0.94, Method: Compositional matrix adjust.
Identities = 26/86 (30%), Positives = 40/86 (46%), Gaps = 14/86 (16%)
Query: 89 IVLRNFKTQNILFN-EENVAKWFDFLLSISIPEGETHITTDRVI----GTRGYSAPEYIS 143
++ R+ K +NIL + K DF G + D V GTR YS PE+I
Sbjct: 131 VLHRDIKDENILIDLNRGELKLIDF--------GSGALLKDTVYTDFDGTRVYSPPEWIR 182
Query: 144 ICVLNEKS-NVFSFGAFLFELLAGRI 168
+ +S V+S G L++++ G I
Sbjct: 183 YHRYHGRSAAVWSLGILLYDMVCGDI 208
>pdb|3UIX|A Chain A, Crystal Structure Of Pim1 Kinase In Complex With Small
Molecule Inhibitor
pdb|3UMX|A Chain A, Crystal Structure Of Pim1 Kinase In Complex With Inhibitor
(Z)-2-[(1h-
Indol-3-Yl)methylene]-7-(Azepan-1-Ylmethyl)-6-
Hydroxybenzofuran- 3(2h)-One
pdb|4ENX|A Chain A, Crystal Structure Of Pim-1 Kinase In Complex With
Inhibitor (2e,5z)-2-
(2-Chlorophenylimino)-5-(4-Hydroxy-3-
Nitrobenzylidene)thiazolidin-4- One
pdb|4ENY|A Chain A, Crystal Structure Of Pim-1 Kinase In Complex With
(2e,5z)-2-(2-
Chlorophenylimino)-5-(4-Hydroxy-3-
Methoxybenzylidene)thiazolidin-4- One
pdb|3UMW|A Chain A, Crystal Structure Of Pim1 Kinase In Complex With Inhibitor
(Z)-2-[(1h-
Indazol-3-Yl)methylene]-6-Methoxy-7-(Piperazin-1-
Ylmethyl)benzofuran- 3(2h)-One
Length = 298
Score = 30.4 bits (67), Expect = 0.96, Method: Compositional matrix adjust.
Identities = 26/86 (30%), Positives = 40/86 (46%), Gaps = 14/86 (16%)
Query: 89 IVLRNFKTQNILFN-EENVAKWFDFLLSISIPEGETHITTDRVI----GTRGYSAPEYIS 143
++ R+ K +NIL + K DF G + D V GTR YS PE+I
Sbjct: 136 VLHRDIKDENILIDLNRGELKLIDF--------GSGALLKDTVYTDFDGTRVYSPPEWIR 187
Query: 144 ICVLNEKS-NVFSFGAFLFELLAGRI 168
+ +S V+S G L++++ G I
Sbjct: 188 YHRYHGRSAAVWSLGILLYDMVCGDI 213
>pdb|4DTK|A Chain A, Novel And Selective Pan-Pim Kinase Inhibitor
Length = 276
Score = 30.4 bits (67), Expect = 0.99, Method: Compositional matrix adjust.
Identities = 26/86 (30%), Positives = 40/86 (46%), Gaps = 14/86 (16%)
Query: 89 IVLRNFKTQNILFN-EENVAKWFDFLLSISIPEGETHITTDRVI----GTRGYSAPEYIS 143
++ R+ K +NIL + K DF G + D V GTR YS PE+I
Sbjct: 134 VLHRDIKDENILIDLNRGELKLIDF--------GSGALLKDTVYTDFDGTRVYSPPEWIR 185
Query: 144 ICVLNEKS-NVFSFGAFLFELLAGRI 168
+ +S V+S G L++++ G I
Sbjct: 186 YHRYHGRSAAVWSLGILLYDMVCGDI 211
>pdb|2XZS|A Chain A, Death Associated Protein Kinase 1 Residues 1-312
pdb|2XZS|B Chain B, Death Associated Protein Kinase 1 Residues 1-312
Length = 312
Score = 30.4 bits (67), Expect = 0.99, Method: Compositional matrix adjust.
Identities = 28/97 (28%), Positives = 46/97 (47%), Gaps = 10/97 (10%)
Query: 74 IVNSLAYLHFGFPRPIVLRNFKTQNILFNEENVAK----WFDFLLSISIPEGETHITTDR 129
I+N + YLH I + K +NI+ + NV K DF L+ I G
Sbjct: 123 ILNGVYYLH---SLQIAHFDLKPENIMLLDRNVPKPRIKIIDFGLAHKIDFGNEF---KN 176
Query: 130 VIGTRGYSAPEYISICVLNEKSNVFSFGAFLFELLAG 166
+ GT + APE ++ L +++++S G + LL+G
Sbjct: 177 IFGTPEFVAPEIVNYEPLGLEADMWSIGVITYILLSG 213
>pdb|1YHS|A Chain A, Crystal Structure Of Pim-1 Bound To Staurosporine
pdb|1YI3|A Chain A, Crystal Structure Of Pim-1 Bound To Ly294002
pdb|1YI4|A Chain A, Structure Of Pim-1 Bound To Adenosine
Length = 273
Score = 30.4 bits (67), Expect = 1.0, Method: Compositional matrix adjust.
Identities = 26/86 (30%), Positives = 40/86 (46%), Gaps = 14/86 (16%)
Query: 89 IVLRNFKTQNILFN-EENVAKWFDFLLSISIPEGETHITTDRVI----GTRGYSAPEYIS 143
++ R+ K +NIL + K DF G + D V GTR YS PE+I
Sbjct: 131 VLHRDIKDENILIDLNRGELKLIDF--------GSGALLKDTVYTDFDGTRVYSPPEWIR 182
Query: 144 ICVLNEKS-NVFSFGAFLFELLAGRI 168
+ +S V+S G L++++ G I
Sbjct: 183 YHRYHGRSAAVWSLGILLYDMVCGDI 208
>pdb|2Y0A|A Chain A, Structure Of Dapk1 Construct Residues 1-304
Length = 326
Score = 30.0 bits (66), Expect = 1.1, Method: Compositional matrix adjust.
Identities = 28/97 (28%), Positives = 46/97 (47%), Gaps = 10/97 (10%)
Query: 74 IVNSLAYLHFGFPRPIVLRNFKTQNILFNEENVAK----WFDFLLSISIPEGETHITTDR 129
I+N + YLH I + K +NI+ + NV K DF L+ I G
Sbjct: 123 ILNGVYYLH---SLQIAHFDLKPENIMLLDRNVPKPRIKIIDFGLAHKIDFGNEF---KN 176
Query: 130 VIGTRGYSAPEYISICVLNEKSNVFSFGAFLFELLAG 166
+ GT + APE ++ L +++++S G + LL+G
Sbjct: 177 IFGTPEFVAPEIVNYEPLGLEADMWSIGVITYILLSG 213
>pdb|2W4K|A Chain A, X-Ray Structure Of A Dap-Kinase 2-302
Length = 302
Score = 30.0 bits (66), Expect = 1.1, Method: Compositional matrix adjust.
Identities = 28/97 (28%), Positives = 46/97 (47%), Gaps = 10/97 (10%)
Query: 74 IVNSLAYLHFGFPRPIVLRNFKTQNILFNEENVAK----WFDFLLSISIPEGETHITTDR 129
I+N + YLH I + K +NI+ + NV K DF L+ I G
Sbjct: 123 ILNGVYYLH---SLQIAHFDLKPENIMLLDRNVPKPRIKIIDFGLAHKIDFGNEF---KN 176
Query: 130 VIGTRGYSAPEYISICVLNEKSNVFSFGAFLFELLAG 166
+ GT + APE ++ L +++++S G + LL+G
Sbjct: 177 IFGTPEFVAPEIVNYEPLGLEADMWSIGVITYILLSG 213
>pdb|1KOA|A Chain A, Twitchin Kinase Fragment (C.Elegans), Autoregulated
Protein Kinase And Immunoglobulin Domains
Length = 491
Score = 30.0 bits (66), Expect = 1.2, Method: Compositional matrix adjust.
Identities = 22/77 (28%), Positives = 38/77 (49%), Gaps = 7/77 (9%)
Query: 93 NFKTQNILF--NEENVAKWFDFLLSISI-PEGETHITTDRVIGTRGYSAPEYISICVLNE 149
+ K +NI+F N K DF L+ + P+ +TT GT ++APE +
Sbjct: 174 DLKPENIMFTTKRSNELKLIDFGLTAHLDPKQSVKVTT----GTAEFAAPEVAEGKPVGY 229
Query: 150 KSNVFSFGAFLFELLAG 166
++++S G + LL+G
Sbjct: 230 YTDMWSVGVLSYILLSG 246
>pdb|2X0G|A Chain A, X-ray Structure Of A Dap-kinase Calmodulin Complex
Length = 334
Score = 30.0 bits (66), Expect = 1.2, Method: Compositional matrix adjust.
Identities = 28/97 (28%), Positives = 46/97 (47%), Gaps = 10/97 (10%)
Query: 74 IVNSLAYLHFGFPRPIVLRNFKTQNILFNEENVAK----WFDFLLSISIPEGETHITTDR 129
I+N + YLH I + K +NI+ + NV K DF L+ I G
Sbjct: 123 ILNGVYYLH---SLQIAHFDLKPENIMLLDRNVPKPRIKIIDFGLAHKIDFGNEF---KN 176
Query: 130 VIGTRGYSAPEYISICVLNEKSNVFSFGAFLFELLAG 166
+ GT + APE ++ L +++++S G + LL+G
Sbjct: 177 IFGTPEFVAPEIVNYEPLGLEADMWSIGVITYILLSG 213
>pdb|3UTO|A Chain A, Twitchin Kinase Region From C.Elegans
(Fn31-Nl-Kin-Crd-Ig26)
pdb|3UTO|B Chain B, Twitchin Kinase Region From C.Elegans
(Fn31-Nl-Kin-Crd-Ig26)
Length = 573
Score = 30.0 bits (66), Expect = 1.3, Method: Compositional matrix adjust.
Identities = 22/77 (28%), Positives = 38/77 (49%), Gaps = 7/77 (9%)
Query: 93 NFKTQNILF--NEENVAKWFDFLLSISI-PEGETHITTDRVIGTRGYSAPEYISICVLNE 149
+ K +NI+F N K DF L+ + P+ +TT GT ++APE +
Sbjct: 280 DLKPENIMFTTKRSNELKLIDFGLTAHLDPKQSVKVTT----GTAEFAAPEVAEGKPVGY 335
Query: 150 KSNVFSFGAFLFELLAG 166
++++S G + LL+G
Sbjct: 336 YTDMWSVGVLSYILLSG 352
>pdb|3NR9|A Chain A, Structure Of Human Cdc2-Like Kinase 2 (Clk2)
pdb|3NR9|B Chain B, Structure Of Human Cdc2-Like Kinase 2 (Clk2)
pdb|3NR9|C Chain C, Structure Of Human Cdc2-Like Kinase 2 (Clk2)
Length = 368
Score = 28.9 bits (63), Expect = 2.5, Method: Compositional matrix adjust.
Identities = 13/37 (35%), Positives = 20/37 (54%)
Query: 130 VIGTRGYSAPEYISICVLNEKSNVFSFGAFLFELLAG 166
++ TR Y APE I ++ +V+S G +FE G
Sbjct: 213 IVSTRHYRAPEVILELGWSQPCDVWSIGCIIFEYYVG 249
>pdb|3RNY|A Chain A, Crystal Structure Of Human Rsk1 C-Terminal Kinase Domain
pdb|3RNY|B Chain B, Crystal Structure Of Human Rsk1 C-Terminal Kinase Domain
Length = 346
Score = 28.9 bits (63), Expect = 2.8, Method: Compositional matrix adjust.
Identities = 25/97 (25%), Positives = 45/97 (46%), Gaps = 9/97 (9%)
Query: 74 IVNSLAYLHFGFPRPIVLRNFKTQNILFNEEN----VAKWFDFLLSISIPEGETHITTDR 129
I ++ YLH + +V R+ K NIL+ +E+ + DF + + + T
Sbjct: 130 IGKTVEYLH---SQGVVHRDLKPSNILYVDESGNPECLRICDFGFAKQLRAENGLLMTP- 185
Query: 130 VIGTRGYSAPEYISICVLNEKSNVFSFGAFLFELLAG 166
T + APE + +E +++S G L+ +LAG
Sbjct: 186 -CYTANFVAPEVLKRQGYDEGCDIWSLGILLYTMLAG 221
>pdb|2WNT|A Chain A, Crystal Structure Of The Human Ribosomal Protein S6 Kinase
pdb|2WNT|B Chain B, Crystal Structure Of The Human Ribosomal Protein S6 Kinase
Length = 330
Score = 28.9 bits (63), Expect = 2.8, Method: Compositional matrix adjust.
Identities = 32/129 (24%), Positives = 58/129 (44%), Gaps = 13/129 (10%)
Query: 46 LVFQSVEYGTLRDCIFGAPLPRLKIASDIVNSLA----YLHFGFPRPIVLRNFKTQNILF 101
LV + + G L D I + AS +++++ YLH + +V R+ K NIL+
Sbjct: 98 LVTELMRGGELLDKILRQKFFSEREASFVLHTIGKTVEYLH---SQGVVHRDLKPSNILY 154
Query: 102 NEEN----VAKWFDFLLSISIPEGETHITTDRVIGTRGYSAPEYISICVLNEKSNVFSFG 157
+E+ + DF + + + T T + APE + +E +++S G
Sbjct: 155 VDESGNPECLRICDFGFAKQLRAENGLLMTP--CYTANFVAPEVLKRQGYDEGCDIWSLG 212
Query: 158 AFLFELLAG 166
L+ +LAG
Sbjct: 213 ILLYTMLAG 221
>pdb|3UOW|A Chain A, Crystal Structure Of Pf10_0123, A Gmp Synthetase From
Plasmodium Falciparum
pdb|3UOW|B Chain B, Crystal Structure Of Pf10_0123, A Gmp Synthetase From
Plasmodium Falciparum
Length = 556
Score = 28.9 bits (63), Expect = 3.0, Method: Compositional matrix adjust.
Identities = 20/81 (24%), Positives = 34/81 (41%), Gaps = 7/81 (8%)
Query: 135 GYSAPEYISICVLNEKSNVFSFGAFLFELLAGRIHIWDLLKDTHDHGCFFNEYLKNYLED 194
G EY I VLN FG+ F L+ R++ + +T D+G + ++
Sbjct: 1 GMEGEEYDKILVLN-------FGSQYFHLIVKRLNNIKIFSETKDYGVELKDIKDMNIKG 53
Query: 195 KRFTGIPAPIIVQDIPCIEKE 215
+G P + P ++KE
Sbjct: 54 VILSGGPYSVTEAGSPHLKKE 74
>pdb|3DLS|A Chain A, Crystal Structure Of Human Pas Kinase Bound To Adp
pdb|3DLS|B Chain B, Crystal Structure Of Human Pas Kinase Bound To Adp
pdb|3DLS|C Chain C, Crystal Structure Of Human Pas Kinase Bound To Adp
pdb|3DLS|D Chain D, Crystal Structure Of Human Pas Kinase Bound To Adp
pdb|3DLS|E Chain E, Crystal Structure Of Human Pas Kinase Bound To Adp
pdb|3DLS|F Chain F, Crystal Structure Of Human Pas Kinase Bound To Adp
Length = 335
Score = 28.5 bits (62), Expect = 3.4, Method: Compositional matrix adjust.
Identities = 21/73 (28%), Positives = 35/73 (47%), Gaps = 6/73 (8%)
Query: 70 IASDIVNSLAYLHFGFPRPIVLRNFKTQNILFNEENVAKWFDFLLSISIPEGETHITTDR 129
I +V+++ YL + I+ R+ K +NI+ E+ K DF + + G+ T
Sbjct: 135 IFRQLVSAVGYLRL---KDIIHRDIKDENIVIAEDFTIKLIDFGSAAYLERGKLFYT--- 188
Query: 130 VIGTRGYSAPEYI 142
GT Y APE +
Sbjct: 189 FCGTIEYCAPEVL 201
>pdb|3VQU|A Chain A, Crystal Structure Of Human Mps1 Catalytic Domain In
Complex With 4- [(4-Amino-5-Cyano-6-Ethoxypyridin-2-
Yl)amino]benzamide
Length = 320
Score = 28.5 bits (62), Expect = 3.7, Method: Compositional matrix adjust.
Identities = 24/103 (23%), Positives = 41/103 (39%), Gaps = 12/103 (11%)
Query: 76 NSLAYLHFGFPRPIVLRNFKTQNILFNEENVAKWFDFLLSISIPEGETHITTDRVIGTRG 135
N L +H IV + K N L + + K DF ++ + T + D +GT
Sbjct: 115 NMLEAVHTIHQHGIVHSDLKPANFLI-VDGMLKLIDFGIANQMQPDTTSVVKDSQVGTVN 173
Query: 136 YSAPEYISICVLNEKS-----------NVFSFGAFLFELLAGR 167
Y PE I + ++ +V+S G L+ + G+
Sbjct: 174 YMPPEAIKDMSSSRENGKSKSKISPKSDVWSLGCILYYMTYGK 216
>pdb|3HMN|A Chain A, Crystal Structure Of Human Mps1 Catalytic Domain In
Complex With Atp
pdb|3HMO|A Chain A, Crystal Structure Of Human Mps1 Catalytic Domain In
Complex With The Inhibitor Staurosporine
pdb|3HMP|A Chain A, Crystal Structure Of Human Mps1 Catalytic Domain In
Complex With A Quinazolin Ligand Compound 4
Length = 342
Score = 28.5 bits (62), Expect = 3.7, Method: Compositional matrix adjust.
Identities = 24/103 (23%), Positives = 41/103 (39%), Gaps = 12/103 (11%)
Query: 76 NSLAYLHFGFPRPIVLRNFKTQNILFNEENVAKWFDFLLSISIPEGETHITTDRVIGTRG 135
N L +H IV + K N L + + K DF ++ + T + D +GT
Sbjct: 163 NMLEAVHTIHQHGIVHSDLKPANFLI-VDGMLKLIDFGIANQMQPDTTSVVKDSQVGTVN 221
Query: 136 YSAPEYISICVLNEKS-----------NVFSFGAFLFELLAGR 167
Y PE I + ++ +V+S G L+ + G+
Sbjct: 222 YMPPEAIKDMSSSRENGKSKSKISPKSDVWSLGCILYYMTYGK 264
>pdb|2X9E|A Chain A, Human Mps1 In Complex With Nms-P715
Length = 317
Score = 28.5 bits (62), Expect = 3.8, Method: Compositional matrix adjust.
Identities = 24/103 (23%), Positives = 41/103 (39%), Gaps = 12/103 (11%)
Query: 76 NSLAYLHFGFPRPIVLRNFKTQNILFNEENVAKWFDFLLSISIPEGETHITTDRVIGTRG 135
N L +H IV + K N L + + K DF ++ + T + D +GT
Sbjct: 119 NMLEAVHTIHQHGIVHSDLKPANFLI-VDGMLKLIDFGIANQMQPDTTSVVKDSQVGTVN 177
Query: 136 YSAPEYISICVLNEKS-----------NVFSFGAFLFELLAGR 167
Y PE I + ++ +V+S G L+ + G+
Sbjct: 178 YMPPEAIKDMSSSRENGKSKSKISPKSDVWSLGCILYYMTYGK 220
>pdb|3CEK|A Chain A, Crystal Structure Of Human Dual Specificity Protein Kinase
(ttk)
pdb|3GFW|A Chain A, Crystal Structure Of Human Dual Specificity Protein Kinase
(Ttk) In Complex With A Pyrolo-Pyridin Ligand
Length = 313
Score = 28.1 bits (61), Expect = 4.3, Method: Compositional matrix adjust.
Identities = 24/103 (23%), Positives = 41/103 (39%), Gaps = 12/103 (11%)
Query: 76 NSLAYLHFGFPRPIVLRNFKTQNILFNEENVAKWFDFLLSISIPEGETHITTDRVIGTRG 135
N L +H IV + K N L + + K DF ++ + T + D +GT
Sbjct: 135 NMLEAVHTIHQHGIVHSDLKPANFLI-VDGMLKLIDFGIANQMQPDTTSVVKDSQVGTVN 193
Query: 136 YSAPEYISICVLNEKS-----------NVFSFGAFLFELLAGR 167
Y PE I + ++ +V+S G L+ + G+
Sbjct: 194 YMPPEAIKDMSSSRENGKSKSKISPKSDVWSLGCILYYMTYGK 236
>pdb|4F3Y|A Chain A, X-Ray Crystal Structure Of Dihydrodipicolinate Reductase
From Burkholderia Thailandensis
pdb|4F3Y|B Chain B, X-Ray Crystal Structure Of Dihydrodipicolinate Reductase
From Burkholderia Thailandensis
Length = 272
Score = 28.1 bits (61), Expect = 4.6, Method: Compositional matrix adjust.
Identities = 20/60 (33%), Positives = 29/60 (48%), Gaps = 8/60 (13%)
Query: 104 ENVAKWFDFLLSISIPEGE-THITT------DRVIGTRGYSAPEYISICVLNEK-SNVFS 155
E V D+L+ ++PEG H+ VIGT G+S P+ + EK + VFS
Sbjct: 68 ERVCAEADYLIDFTLPEGTLVHLDAALRHDVKLVIGTTGFSEPQKAQLRAAGEKIALVFS 127
>pdb|3DBQ|A Chain A, Crystal Structure Of Ttk Kinase Domain
Length = 343
Score = 28.1 bits (61), Expect = 4.8, Method: Compositional matrix adjust.
Identities = 24/103 (23%), Positives = 41/103 (39%), Gaps = 12/103 (11%)
Query: 76 NSLAYLHFGFPRPIVLRNFKTQNILFNEENVAKWFDFLLSISIPEGETHITTDRVIGTRG 135
N L +H IV + K N L + + K DF ++ + T + D +GT
Sbjct: 116 NMLEAVHTIHQHGIVHSDLKPANFLI-VDGMLKLIDFGIANQMQPDTTSVVKDSQVGTVN 174
Query: 136 YSAPEYISICVLNEKS-----------NVFSFGAFLFELLAGR 167
Y PE I + ++ +V+S G L+ + G+
Sbjct: 175 YMPPEAIKDMSSSRENGKSKSKISPKSDVWSLGCILYYMTYGK 217
>pdb|2ZMC|A Chain A, Crystal Structure Of Human Mitotic Checkpoint Kinase Mps1
Catalytic Domain Apo Form
Length = 390
Score = 27.7 bits (60), Expect = 5.3, Method: Compositional matrix adjust.
Identities = 24/103 (23%), Positives = 41/103 (39%), Gaps = 12/103 (11%)
Query: 76 NSLAYLHFGFPRPIVLRNFKTQNILFNEENVAKWFDFLLSISIPEGETHITTDRVIGTRG 135
N L +H IV + K N L + + K DF ++ + T + D +GT
Sbjct: 163 NMLEAVHTIHQHGIVHSDLKPANFLI-VDGMLKLIDFGIANQMQPDTTSVVKDSQVGTVN 221
Query: 136 YSAPEYISICVLNEKS-----------NVFSFGAFLFELLAGR 167
Y PE I + ++ +V+S G L+ + G+
Sbjct: 222 YMPPEAIKDMSSSRENGKSKSKISPKSDVWSLGCILYYMTYGK 264
Database: pdbaa
Posted date: Mar 3, 2013 10:34 PM
Number of letters in database: 14,973,337
Number of sequences in database: 62,578
Lambda K H
0.325 0.142 0.447
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 7,596,225
Number of Sequences: 62578
Number of extensions: 311409
Number of successful extensions: 1687
Number of sequences better than 100.0: 626
Number of HSP's better than 100.0 without gapping: 141
Number of HSP's successfully gapped in prelim test: 485
Number of HSP's that attempted gapping in prelim test: 1158
Number of HSP's gapped (non-prelim): 747
length of query: 241
length of database: 14,973,337
effective HSP length: 96
effective length of query: 145
effective length of database: 8,965,849
effective search space: 1300048105
effective search space used: 1300048105
T: 11
A: 40
X1: 15 ( 7.0 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 40 (21.6 bits)
S2: 50 (23.9 bits)