Query         044022
Match_columns 241
No_of_seqs    138 out of 1917
Neff          10.3
Searched_HMMs 29240
Date          Mon Mar 25 18:36:34 2013
Command       hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/044022.a3m -d /work/01045/syshi/HHdatabase/pdb70.hhm -o /work/01045/syshi/hhsearch_pdb/044022hhsearch_pdb -cpu 12 -v 0 

 No Hit                             Prob E-value P-value  Score    SS Cols Query HMM  Template HMM
  1 4gt4_A Tyrosine-protein kinase 100.0 1.7E-53   6E-58  343.3  11.9  215    1-241    61-296 (308)
  2 4asz_A BDNF/NT-3 growth factor 100.0 1.3E-53 4.5E-58  342.7   8.2  214    1-241    48-279 (299)
  3 3omv_A RAF proto-oncogene seri 100.0 2.9E-52   1E-56  335.2  15.3  210   10-241    73-290 (307)
  4 4aoj_A High affinity nerve gro 100.0 1.7E-52 5.7E-57  340.5  12.6  214    1-241    76-309 (329)
  5 4aw0_A HPDK1, 3-phosphoinositi 100.0 1.1E-51 3.8E-56  331.3  13.8  214    1-241    62-281 (311)
  6 4fih_A Serine/threonine-protei 100.0 4.1E-51 1.4E-55  332.6  15.1  214    1-241   104-320 (346)
  7 4b9d_A Serine/threonine-protei 100.0 2.4E-51 8.3E-56  334.4  12.1  213    1-241    54-273 (350)
  8 3fpq_A Serine/threonine-protei 100.0   1E-50 3.4E-55  324.0  14.3  202   11-241    67-279 (290)
  9 4fie_A Serine/threonine-protei 100.0 4.4E-50 1.5E-54  334.0  17.1  214    1-241   181-397 (423)
 10 4ase_A Vascular endothelial gr 100.0 2.2E-51 7.6E-56  336.5   8.9  215    2-241   100-337 (353)
 11 4g3f_A NF-kappa-beta-inducing  100.0   5E-50 1.7E-54  325.3  12.4  201   17-241    98-306 (336)
 12 3hyh_A Carbon catabolite-derep 100.0 3.3E-49 1.1E-53  312.8  14.7  210    1-241    43-259 (275)
 13 3ubd_A Ribosomal protein S6 ki 100.0 3.8E-50 1.3E-54  322.2   9.0  200   12-240    69-272 (304)
 14 3hmm_A TGF-beta receptor type- 100.0 1.3E-48 4.6E-53  315.0  13.3  218   17-241    45-287 (303)
 15 4g31_A Eukaryotic translation  100.0 1.5E-48 5.2E-53  313.6  11.0  213    1-241    35-276 (299)
 16 4b99_A Mitogen-activated prote 100.0 4.4E-45 1.5E-49  303.9  14.3  168    1-172    84-265 (398)
 17 4f9c_A Cell division cycle 7-r 100.0 3.7E-45 1.3E-49  301.2  13.6  158   12-172    62-249 (361)
 18 3uto_A Twitchin; kinase, muscl 100.0 4.5E-44 1.5E-48  310.8  13.7  204   12-241   197-407 (573)
 19 3v5w_A G-protein coupled recep 100.0 2.8E-43 9.5E-48  306.0  16.1  199   13-239   233-439 (689)
 20 3uim_A Brassinosteroid insensi 100.0 1.7E-42 5.7E-47  282.4  13.7  232    1-241    59-301 (326)
 21 2qkw_B Protein kinase; three-h 100.0 5.1E-42 1.7E-46  279.1  16.4  221   11-241    77-305 (321)
 22 2psq_A Fibroblast growth facto 100.0 1.2E-42 4.2E-47  288.0  12.9  215    1-241   118-354 (370)
 23 3fxz_A Serine/threonine-protei 100.0   1E-41 3.5E-46  274.6  16.6  205   11-241    59-266 (297)
 24 3zgw_A Maternal embryonic leuc 100.0 4.2E-42 1.4E-46  282.1  12.8  213    1-241    40-257 (347)
 25 3fe3_A MAP/microtubule affinit 100.0 8.3E-42 2.8E-46  278.6  13.6  211    1-241    45-261 (328)
 26 3cbl_A C-FES, proto-oncogene t 100.0 7.8E-43 2.7E-47  289.9   7.7  215    1-241   144-364 (377)
 27 3soc_A Activin receptor type-2 100.0 9.4E-42 3.2E-46  277.7  13.3  218   13-241    62-308 (322)
 28 3p86_A Serine/threonine-protei 100.0 1.5E-41   5E-46  275.1  14.3  214    1-241    65-288 (309)
 29 3tki_A Serine/threonine-protei 100.0 8.8E-42   3E-46  278.0  12.8  217    1-241    37-258 (323)
 30 2ivs_A Proto-oncogene tyrosine 100.0   9E-42 3.1E-46  276.4  11.6  215    1-241    58-301 (314)
 31 3kul_A Ephrin type-A receptor  100.0 2.1E-41 7.3E-46  276.0  13.9  215    1-241    82-303 (325)
 32 3s95_A LIMK-1, LIM domain kina 100.0 3.5E-41 1.2E-45  272.8  14.4  208   10-241    48-272 (310)
 33 2yab_A Death-associated protei 100.0 6.6E-41 2.3E-45  276.5  15.7  204   12-241    58-269 (361)
 34 3tt0_A Basic fibroblast growth 100.0 4.7E-41 1.6E-45  279.7  14.2  215    1-241   106-342 (382)
 35 3vhe_A Vascular endothelial gr 100.0   1E-41 3.6E-46  281.1  10.2  216    1-241    57-345 (359)
 36 1rjb_A FL cytokine receptor; k 100.0 1.1E-41 3.9E-46  279.4  10.3  216    1-241    80-324 (344)
 37 1luf_A Muscle-specific tyrosin 100.0 1.1E-41 3.9E-46  279.1  10.0  215    1-241    82-325 (343)
 38 2c30_A Serine/threonine-protei 100.0 1.3E-40 4.4E-45  270.9  15.9  214    1-241    75-291 (321)
 39 3soa_A Calcium/calmodulin-depe 100.0 8.3E-41 2.8E-45  282.7  14.9  206   11-241    52-264 (444)
 40 3l9p_A Anaplastic lymphoma kin 100.0 1.2E-41 4.1E-46  281.8   9.4  215    1-241   106-335 (367)
 41 4dc2_A Protein kinase C IOTA t 100.0 1.9E-40 6.5E-45  276.4  16.5  209   11-239    94-307 (396)
 42 4euu_A Serine/threonine-protei 100.0 1.9E-40 6.6E-45  269.5  16.2  230    1-241    39-299 (319)
 43 2bdw_A Hypothetical protein K1 100.0 9.1E-41 3.1E-45  276.0  14.3  205   11-241    70-281 (362)
 44 2qol_A Ephrin receptor; recept 100.0 6.4E-41 2.2E-45  277.9  13.4  214    2-241    79-299 (373)
 45 3lb7_A RAF proto-oncogene seri 100.0 1.7E-40   6E-45  268.5  15.6  209   11-241    74-290 (307)
 46 1o6l_A RAC-beta serine/threoni 100.0 1.9E-40 6.6E-45  271.4  15.9  199   10-237    46-248 (337)
 47 2y0a_A Death-associated protei 100.0 1.3E-40 4.4E-45  271.4  14.5  204   12-241    57-268 (326)
 48 3poz_A Epidermal growth factor 100.0 4.2E-41 1.4E-45  274.4  11.6  213    2-241    50-268 (327)
 49 1t46_A HOMO sapiens V-KIT hard 100.0 3.6E-41 1.2E-45  272.8  10.2  216    1-241    58-297 (313)
 50 1tki_A Titin; serine kinase, m 100.0 5.7E-41 1.9E-45  273.0  11.2  204   12-241    44-254 (321)
 51 3a8x_A Protein kinase C IOTA t 100.0   5E-40 1.7E-44  269.9  16.6  209   11-239    51-264 (345)
 52 1p4o_A Insulin-like growth fac 100.0 3.9E-41 1.3E-45  273.7   9.9  215    1-241    60-289 (322)
 53 2i1m_A Macrophage colony-stimu 100.0 1.6E-41 5.5E-46  277.3   7.4  215    2-241    82-316 (333)
 54 1fot_A TPK1 delta, CAMP-depend 100.0 7.2E-40 2.5E-44  266.1  17.0  196   11-238    48-247 (318)
 55 3kex_A Receptor tyrosine-prote 100.0 7.3E-41 2.5E-45  272.8  11.2  213    2-241    48-266 (325)
 56 1k9a_A Carboxyl-terminal SRC k 100.0 1.2E-40 4.2E-45  282.6  12.6  199   12-241   229-435 (450)
 57 3qd2_B Eukaryotic translation  100.0 9.4E-41 3.2E-45  272.2  11.3  213    1-241    36-322 (332)
 58 4fr4_A YANK1, serine/threonine 100.0 1.3E-39 4.5E-44  270.4  18.1  203   10-239    56-265 (384)
 59 2zv2_A Calcium/calmodulin-depe 100.0 3.6E-40 1.2E-44  265.4  14.3  202   13-241    80-289 (298)
 60 3gni_B Strad alpha; kinase fol 100.0 9.8E-41 3.4E-45  278.3  11.2  169    1-172    57-239 (389)
 61 2pvf_A Fibroblast growth facto 100.0 4.4E-40 1.5E-44  269.1  14.8  215    1-241    72-308 (334)
 62 2yex_A Serine/threonine-protei 100.0 6.3E-40 2.2E-44  260.9  15.2  217    1-241    37-258 (276)
 63 3txo_A PKC-L, NPKC-ETA, protei 100.0 3.1E-40   1E-44  271.8  13.6  200   11-239    65-269 (353)
 64 3lxp_A Non-receptor tyrosine-p 100.0   1E-40 3.5E-45  271.1  10.6  225    1-241    65-300 (318)
 65 1mp8_A Focal adhesion kinase 1 100.0 8.4E-41 2.9E-45  267.0   9.8  212    2-241    49-266 (281)
 66 2nru_A Interleukin-1 receptor- 100.0 8.4E-40 2.9E-44  264.2  15.5  217   11-241    72-296 (307)
 67 3h4j_B AMPK kdaid, SNF1-like p 100.0 1.3E-40 4.6E-45  272.1  10.9  197   12-241    52-255 (336)
 68 3c0i_A Peripheral plasma membr 100.0 6.6E-40 2.2E-44  269.8  14.8  204   12-241    69-283 (351)
 69 1xjd_A Protein kinase C, theta 100.0 8.3E-40 2.8E-44  268.4  15.3  201   11-240    59-264 (345)
 70 3qup_A Tyrosine-protein kinase 100.0 2.6E-40 8.9E-45  269.1  12.1  213    2-240    57-287 (323)
 71 4hcu_A Tyrosine-protein kinase 100.0 3.8E-40 1.3E-44  261.5  12.8  203   12-241    48-256 (269)
 72 3sxs_A Cytoplasmic tyrosine-pr 100.0 6.5E-40 2.2E-44  260.0  14.1  203   12-241    46-254 (268)
 73 3kn6_A Ribosomal protein S6 ki 100.0 9.3E-40 3.2E-44  266.3  15.3  213   11-241    47-267 (325)
 74 1rdq_E PKA C-alpha, CAMP-depen 100.0 8.6E-40 2.9E-44  268.9  15.2  196   11-238    83-282 (350)
 75 1kob_A Twitchin; kinase, intra 100.0 5.7E-40 1.9E-44  273.2  14.3  204   12-241    91-301 (387)
 76 3hko_A Calcium/calmodulin-depe 100.0 2.4E-40 8.1E-45  271.6  11.8  208   11-241    70-327 (345)
 77 2ozo_A Tyrosine-protein kinase 100.0 2.1E-40 7.3E-45  290.5  12.2  214    1-241   368-588 (613)
 78 1opk_A P150, C-ABL, proto-onco 100.0 1.9E-40 6.3E-45  284.5  11.6  203   12-241   259-468 (495)
 79 2pmi_A Negative RE, cyclin-dep 100.0 2.3E-40 7.7E-45  269.0  11.0  166    1-172    35-211 (317)
 80 4eqm_A Protein kinase; transfe 100.0 4.5E-40 1.5E-44  264.6  12.7  206   11-239    53-262 (294)
 81 4e5w_A Tyrosine-protein kinase 100.0 2.5E-40 8.6E-45  266.6  11.2  225    1-241    55-292 (302)
 82 2xir_A Vascular endothelial gr 100.0   2E-40 6.9E-45  268.7  10.7  216    1-241    62-300 (316)
 83 3niz_A Rhodanese family protei 100.0 1.2E-39   4E-44  264.1  14.8  155   12-172    62-222 (311)
 84 3v8s_A RHO-associated protein  100.0 1.7E-40 5.8E-45  278.0  10.0  207   11-241   111-326 (410)
 85 3ugc_A Tyrosine-protein kinase 100.0 1.7E-40 5.8E-45  266.9   9.6  215   11-241    53-281 (295)
 86 2y94_A 5'-AMP-activated protei 100.0 1.9E-39 6.4E-44  276.3  16.4  201   11-241    58-263 (476)
 87 3lzb_A Epidermal growth factor 100.0 4.2E-40 1.4E-44  268.6  11.9  211    4-241    52-268 (327)
 88 2x4f_A Myosin light chain kina 100.0 3.1E-40 1.1E-44  273.8  11.2  204   12-241   129-339 (373)
 89 3a62_A Ribosomal protein S6 ki 100.0 1.9E-39 6.6E-44  264.6  15.6  199   12-239    64-266 (327)
 90 2a2a_A Death-associated protei 100.0 1.4E-39 4.8E-44  264.7  14.7  204   12-241    58-269 (321)
 91 3a7i_A MST3 kinase, serine/thr 100.0 1.2E-39 4.2E-44  262.8  14.2  213    1-241    52-267 (303)
 92 3c1x_A Hepatocyte growth facto 100.0   2E-40 6.9E-45  274.8   9.8  214    2-241   123-345 (373)
 93 1mqb_A Ephrin type-A receptor  100.0 1.1E-39 3.9E-44  266.6  14.1  213    2-240    79-298 (333)
 94 3dtc_A Mitogen-activated prote 100.0 8.2E-40 2.8E-44  259.7  12.6  202   11-241    48-263 (271)
 95 1u59_A Tyrosine-protein kinase 100.0   5E-40 1.7E-44  263.3  11.4  214    1-241    42-262 (287)
 96 3kk8_A Calcium/calmodulin depe 100.0 1.6E-39 5.5E-44  259.7  14.2  205   11-241    47-258 (284)
 97 3uc3_A Serine/threonine-protei 100.0 7.1E-40 2.4E-44  270.6  12.3  206   12-241    59-271 (361)
 98 3o0g_A Cell division protein k 100.0 3.1E-39 1.1E-43  259.2  15.7  166    1-172    32-204 (292)
 99 3q4u_A Activin receptor type-1 100.0 2.3E-39   8E-44  260.7  15.0  218   12-241    43-292 (301)
100 2i0e_A Protein kinase C-beta I 100.0 3.9E-39 1.3E-43  265.1  16.6  200   11-239    62-266 (353)
101 1qcf_A Haematopoetic cell kina 100.0 4.8E-40 1.6E-44  279.3  11.4  202   11-240   225-433 (454)
102 3is5_A Calcium-dependent prote 100.0 3.2E-39 1.1E-43  258.4  15.6  213    1-241    52-275 (285)
103 4f0f_A Serine/threonine-protei 100.0 2.7E-39 9.2E-44  258.9  15.1  198   14-241    68-279 (287)
104 3og7_A AKAP9-BRAF fusion prote 100.0 1.3E-39 4.6E-44  261.1  13.3  209   11-241    62-278 (289)
105 3cc6_A Protein tyrosine kinase 100.0   4E-40 1.4E-44  263.0   9.7  212    2-241    46-263 (281)
106 1ob3_A PFPK5, cell division co 100.0 2.5E-39 8.7E-44  259.3  14.3  156   11-172    42-203 (288)
107 2eva_A TAK1 kinase - TAB1 chim 100.0 3.9E-39 1.3E-43  260.6  15.4  202   12-241    44-253 (307)
108 4aw2_A Serine/threonine-protei 100.0 1.9E-39 6.5E-44  273.6  14.0  207   12-241   117-335 (437)
109 3f66_A Hepatocyte growth facto 100.0   1E-39 3.5E-44  262.6  11.8  214    2-241    59-281 (298)
110 3kmu_A ILK, integrin-linked ki 100.0 8.4E-40 2.9E-44  259.4  11.1  208    2-241    39-260 (271)
111 2w4o_A Calcium/calmodulin-depe 100.0 1.5E-39 5.3E-44  267.4  12.9  204   13-241    92-302 (349)
112 1xbb_A Tyrosine-protein kinase 100.0 1.1E-39 3.7E-44  261.8  11.6  213    2-241    50-269 (291)
113 3dls_A PAS domain-containing s 100.0 1.5E-39 5.1E-44  266.1  12.6  194   12-241    72-271 (335)
114 3dbq_A Dual specificity protei 100.0 1.9E-39 6.4E-44  266.3  13.0  205   11-241    49-270 (343)
115 1fmk_A C-SRC, P60-SRC, tyrosin 100.0 7.4E-40 2.5E-44  278.0  10.9  201   12-240   222-429 (452)
116 3ork_A Serine/threonine protei 100.0 1.3E-40 4.4E-45  269.7   5.9  217    1-240    42-269 (311)
117 2eue_A Carbon catabolite derep 100.0 3.4E-39 1.2E-43  256.8  14.1  200   11-241    55-259 (275)
118 3gen_A Tyrosine-protein kinase 100.0 1.9E-39 6.5E-44  259.2  12.5  203   12-241    62-270 (283)
119 2yfx_A Tyrosine-protein kinase 100.0 1.1E-39 3.6E-44  266.0  11.2  215    1-241    65-294 (327)
120 3f3z_A Calcium/calmodulin-depe 100.0 2.3E-39   8E-44  258.0  12.9  203   11-240    48-257 (277)
121 3pls_A Macrophage-stimulating  100.0 1.7E-39 5.9E-44  261.1  12.1  215    2-241    55-277 (298)
122 2zmd_A Dual specificity protei 100.0 4.1E-39 1.4E-43  268.5  14.6  215    1-241    85-317 (390)
123 3ttj_A Mitogen-activated prote 100.0 3.7E-39 1.3E-43  274.3  14.5  165    1-172    92-265 (464)
124 3c4z_A Rhodopsin kinase; Ser/T 100.0 1.2E-38 4.1E-43  274.5  17.9  205   11-240   227-439 (543)
125 1u5q_A Serine/threonine protei 100.0 1.3E-39 4.3E-44  267.8  11.3  198   12-241    97-302 (348)
126 4ejn_A RAC-alpha serine/threon 100.0 8.3E-40 2.8E-44  277.3  10.4  198   11-237   190-392 (446)
127 3eqc_A Dual specificity mitoge 100.0 4.1E-40 1.4E-44  271.8   8.3  165    1-172    63-232 (360)
128 1fvr_A Tyrosine-protein kinase 100.0   2E-39 6.7E-44  264.4  12.0  211    2-241    58-290 (327)
129 4fl3_A Tyrosine-protein kinase 100.0 1.1E-39 3.8E-44  286.8  11.1  214    1-241   401-621 (635)
130 4fvq_A Tyrosine-protein kinase 100.0 1.2E-39 4.2E-44  261.0  10.5  198   11-241    54-265 (289)
131 3brb_A Proto-oncogene tyrosine 100.0 2.8E-39 9.4E-44  261.9  12.6  205   11-241    78-298 (313)
132 1nxk_A MAP kinase-activated pr 100.0 3.7E-39 1.3E-43  269.6  13.7  207   13-241    98-318 (400)
133 2r5t_A Serine/threonine-protei 100.0 3.2E-39 1.1E-43  267.4  13.0  201   11-240    80-285 (373)
134 3nyv_A Calmodulin-domain prote 100.0 1.5E-39   5E-44  278.4  11.2  204   11-241    68-278 (484)
135 3fdn_A Serine/threonine-protei 100.0 3.7E-39 1.2E-43  257.2  12.8  200   11-241    51-254 (279)
136 4eut_A Serine/threonine-protei 100.0 2.5E-39 8.4E-44  270.5  12.3  230    1-241    39-299 (396)
137 3cok_A Serine/threonine-protei 100.0 2.7E-39 9.3E-44  257.7  12.0  201   12-241    54-259 (278)
138 3mwu_A Calmodulin-domain prote 100.0 2.7E-39 9.2E-44  276.9  12.7  204   11-241    63-273 (486)
139 4agu_A Cyclin-dependent kinase 100.0 2.9E-39 9.9E-44  261.5  12.1  225   12-241    45-281 (311)
140 3t9t_A Tyrosine-protein kinase 100.0   3E-39   1E-43  255.9  11.6  203   12-241    46-254 (267)
141 3mdy_A Bone morphogenetic prot 100.0 2.4E-38 8.1E-43  258.7  17.1  215   12-241    72-321 (337)
142 3oz6_A Mitogen-activated prote 100.0 5.4E-39 1.8E-43  267.8  13.5  158   11-172    50-233 (388)
143 3lij_A Calcium/calmodulin depe 100.0 4.3E-39 1.5E-43  276.1  13.3  204   11-241    78-288 (494)
144 2rku_A Serine/threonine-protei 100.0 1.8E-38 6.1E-43  255.0  16.1  202   11-241    57-262 (294)
145 1t4h_A Serine/threonine-protei 100.0 9.6E-39 3.3E-43  256.1  14.3  202   11-241    67-279 (290)
146 4aaa_A Cyclin-dependent kinase 100.0 3.8E-39 1.3E-43  263.2  12.2  226   11-241    66-303 (331)
147 2owb_A Serine/threonine-protei 100.0 1.4E-38 4.8E-43  260.3  15.5  202   11-241    83-288 (335)
148 1csn_A Casein kinase-1; phosph 100.0 1.1E-38 3.6E-43  256.5  14.4  210   12-241    48-273 (298)
149 2vgo_A Serine/threonine-protei 100.0   1E-38 3.5E-43  255.2  14.1  199   12-241    57-259 (284)
150 2vwi_A Serine/threonine-protei 100.0 9.9E-40 3.4E-44  263.0   8.2  222    1-241    45-284 (303)
151 2ac3_A MAP kinase-interacting  100.0 6.6E-39 2.3E-43  260.0  12.9  227    1-241    43-292 (316)
152 2izr_A Casein kinase I isoform 100.0   5E-39 1.7E-43  262.4  12.1  207   13-240    48-270 (330)
153 2jam_A Calcium/calmodulin-depe 100.0   7E-39 2.4E-43  258.6  12.8  203   12-241    49-258 (304)
154 2acx_A G protein-coupled recep 100.0   4E-39 1.4E-43  278.3  12.1  203   11-239   226-434 (576)
155 3kfa_A Tyrosine-protein kinase 100.0 4.8E-39 1.6E-43  257.5  11.6  203   12-241    52-261 (288)
156 3p1a_A MYT1 kinase, membrane-a 100.0 9.2E-39 3.2E-43  258.8  13.3  197   12-241    99-301 (311)
157 1cm8_A Phosphorylated MAP kina 100.0 1.4E-38 4.8E-43  263.4  14.7  153   11-172    66-228 (367)
158 3q5i_A Protein kinase; CDPK, m 100.0 5.7E-39 1.9E-43  276.0  12.4  204   11-241    88-298 (504)
159 3bhy_A Death-associated protei 100.0 7.7E-39 2.6E-43  255.6  12.1  204   12-241    51-262 (283)
160 3lxl_A Tyrosine-protein kinase 100.0   1E-39 3.4E-44  266.2   7.1  215   11-241    66-293 (327)
161 3rgf_A Cyclin-dependent kinase 100.0 7.9E-39 2.7E-43  268.2  12.7  157   13-173    62-239 (405)
162 2vd5_A DMPK protein; serine/th 100.0 4.9E-39 1.7E-43  269.3  11.4  202   12-237   104-317 (412)
163 3n9x_A Phosphotransferase; mal 100.0 2.4E-38   8E-43  267.3  15.5  167    1-171    56-253 (432)
164 3lm5_A Serine/threonine-protei 100.0 1.4E-38 4.7E-43  259.5  13.6  214    2-241    60-284 (327)
165 2h34_A Serine/threonine-protei 100.0 1.3E-38 4.4E-43  257.8  13.1  204   12-240    77-285 (309)
166 3g2f_A Bone morphogenetic prot 100.0 1.3E-38 4.3E-43  260.4  12.7  220   13-241    49-308 (336)
167 3mtl_A Cell division protein k 100.0 1.5E-39 5.3E-44  264.8   7.1  165    2-172    33-203 (324)
168 2v62_A Serine/threonine-protei 100.0   8E-39 2.7E-43  262.8  11.3  212   13-241    92-318 (345)
169 2clq_A Mitogen-activated prote 100.0 1.3E-38 4.5E-43  255.6  12.4  205   11-241    61-275 (295)
170 3gbz_A Kinase, CMGC CDK; ssgci 100.0 3.4E-39 1.2E-43  263.3   9.1  166    1-172    64-240 (329)
171 2h8h_A Proto-oncogene tyrosine 100.0 2.5E-39 8.6E-44  279.9   8.5  201   12-240   305-512 (535)
172 2wqm_A Serine/threonine-protei 100.0 1.4E-38 4.7E-43  257.5  12.2  206   11-241    74-287 (310)
173 1u46_A ACK-1, activated CDC42  100.0 5.8E-39   2E-43  257.3   9.9  205   11-241    63-274 (291)
174 3qa8_A MGC80376 protein; kinas 100.0   4E-38 1.4E-42  275.1  16.0  235    1-241    44-294 (676)
175 1qpc_A LCK kinase; alpha beta  100.0 3.4E-38 1.2E-42  251.5  14.2  201   12-240    51-258 (279)
176 3com_A Serine/threonine-protei 100.0 2.8E-38 9.5E-43  256.1  13.8  204   12-241    67-275 (314)
177 2h6d_A 5'-AMP-activated protei 100.0 1.8E-38 6.3E-43  252.6  12.4  201   11-241    53-258 (276)
178 3llt_A Serine/threonine kinase 100.0 4.1E-38 1.4E-42  259.8  15.0  152   12-172    74-261 (360)
179 2w5a_A Serine/threonine-protei 100.0 2.8E-39 9.4E-44  257.7   7.3  203   11-241    47-264 (279)
180 3i6u_A CDS1, serine/threonine- 100.0   2E-38   7E-43  266.7  12.9  203   13-241   184-396 (419)
181 1ua2_A CAK, cell division prot 100.0 4.6E-38 1.6E-42  258.3  14.7  214   13-241    56-288 (346)
182 3q60_A ROP5B; pseudokinase, tr 100.0 5.4E-39 1.8E-43  266.3   9.1  217    1-241    92-349 (371)
183 3rp9_A Mitogen-activated prote 100.0 2.8E-38 9.6E-43  268.8  13.7  152   11-166    94-280 (458)
184 2qr7_A Ribosomal protein S6 ki 100.0 3.2E-38 1.1E-42  258.8  13.5  204   15-240    61-273 (342)
185 2xrw_A Mitogen-activated prote 100.0 2.9E-38 9.8E-43  261.9  13.3  155   11-172    66-228 (371)
186 3op5_A Serine/threonine-protei 100.0 8.1E-39 2.8E-43  264.5  10.0  208   16-240    95-318 (364)
187 3byv_A Rhoptry kinase; malaria 100.0 1.7E-39   6E-44  269.7   5.9  193   11-241   115-356 (377)
188 3pfq_A PKC-B, PKC-beta, protei 100.0 9.4E-38 3.2E-42  276.2  17.3  200   11-239   383-587 (674)
189 1b6c_B TGF-B superfamily recep 100.0 5.8E-38   2E-42  257.0  14.8  219   11-241    76-326 (342)
190 3gxj_A TGF-beta receptor type- 100.0 5.3E-40 1.8E-44  264.6   2.6  219   11-241    37-287 (303)
191 1byg_A CSK, protein (C-termina 100.0 1.9E-38 6.3E-43  253.0  11.4  199   12-241    57-263 (278)
192 1x8b_A WEE1HU, WEE1-like prote 100.0 1.3E-38 4.4E-43  254.5  10.5  196   11-241    52-276 (289)
193 3g33_A Cell division protein k 100.0 3.4E-38 1.2E-42  255.0  13.0  213   13-241    55-293 (308)
194 2w1i_A JAK2; chromosomal rearr 100.0 1.7E-38 5.7E-43  258.9  11.2  215   11-241    84-312 (326)
195 3nsz_A CK II alpha, casein kin 100.0 5.8E-38   2E-42  255.9  14.3  156   11-172    72-233 (330)
196 2y7j_A Phosphorylase B kinase  100.0 1.8E-38 6.3E-43  262.5  11.3  203   13-241   143-356 (365)
197 2a19_B Interferon-induced, dou 100.0 2.9E-38   1E-42  252.2  11.7  194   14-241    49-264 (284)
198 2j0j_A Focal adhesion kinase 1 100.0 3.4E-38 1.2E-42  278.3  13.3  205    9-241   431-641 (656)
199 3e7e_A HBUB1, BUB1A, mitotic c 100.0 1.8E-37 6.1E-42  256.6  16.6  198   11-239   106-326 (365)
200 3qyz_A Mitogen-activated prote 100.0 4.5E-38 1.6E-42  260.1  13.0  168    1-172    57-234 (364)
201 2pml_X PFPK7, Ser/Thr protein  100.0 5.7E-38   2E-42  257.7  13.4  211   14-241    88-319 (348)
202 1vzo_A Ribosomal protein S6 ki 100.0 2.1E-38 7.1E-43  261.3  10.6  204   11-238   100-310 (355)
203 2fst_X Mitogen-activated prote 100.0 2.5E-38 8.5E-43  261.8  10.7  163    1-172    59-232 (367)
204 2b9h_A MAP kinase FUS3, mitoge 100.0 6.6E-38 2.2E-42  257.8  12.5  168    1-172    41-225 (353)
205 3mi9_A Cell division protein k 100.0   3E-37   1E-41  253.9  16.5  158   11-172    58-231 (351)
206 4hgt_A Casein kinase I isoform 100.0 1.6E-37 5.6E-42  249.3  14.3  209   13-241    48-270 (296)
207 2wtk_C Serine/threonine-protei 100.0 1.6E-37 5.6E-42  250.5  14.1  203   11-241    48-260 (305)
208 2jii_A Serine/threonine-protei 100.0 3.5E-38 1.2E-42  259.6  10.3  211   14-241    87-326 (352)
209 3uzp_A CKI-delta, CKID, casein 100.0 2.4E-37 8.2E-42  248.4  14.9  209   13-241    48-270 (296)
210 1phk_A Phosphorylase kinase; g 100.0 1.4E-37 4.9E-42  250.0  13.5  204   12-241    66-280 (298)
211 2j7t_A Serine/threonine-protei 100.0 3.2E-38 1.1E-42  254.3   9.5  205   11-241    58-272 (302)
212 2r3i_A Cell division protein k 100.0 1.5E-37 5.2E-42  250.0  13.2  156   11-172    44-206 (299)
213 3p23_A Serine/threonine-protei 100.0 2.6E-37   9E-42  260.7  15.0  203   14-241    62-280 (432)
214 4exu_A Mitogen-activated prote 100.0 3.3E-37 1.1E-41  255.6  15.2  163    1-172    72-244 (371)
215 2x7f_A TRAF2 and NCK-interacti 100.0   9E-38 3.1E-42  254.3  11.4  203   12-241    63-283 (326)
216 2ycf_A Serine/threonine-protei 100.0   6E-38 2.1E-42  255.1  10.1  203   13-241    59-271 (322)
217 2wei_A Calmodulin-domain prote 100.0 7.7E-38 2.6E-42  250.5  10.5  214    1-241    52-273 (287)
218 3pg1_A Mitogen-activated prote 100.0 7.4E-38 2.5E-42  258.4  10.6  153   13-172    73-236 (362)
219 2rio_A Serine/threonine-protei 100.0 1.5E-37   5E-42  262.6  12.5  207   12-241    51-292 (434)
220 3fme_A Dual specificity mitoge 100.0 1.6E-37 5.4E-42  248.8  11.6  213    1-241    37-263 (290)
221 2y4i_B KSR2, HKSR2, kinase sup 100.0 6.8E-38 2.3E-42  254.2   9.3  205   11-241    71-292 (319)
222 3kvw_A DYRK2, dual specificity 100.0 1.3E-37 4.4E-42  262.5  10.9  152   12-172   136-301 (429)
223 3an0_A Dual specificity mitoge 100.0 1.2E-37   4E-42  255.2  10.3  213    1-241    81-307 (340)
224 3cek_A Dual specificity protei 100.0 2.9E-37   1E-41  250.1  12.5  214    2-241    58-289 (313)
225 1zy4_A Serine/threonine-protei 100.0 4.4E-37 1.5E-41  247.3  13.3  205   12-241    45-280 (303)
226 3coi_A Mitogen-activated prote 100.0 1.3E-36 4.3E-41  250.3  16.1  163    1-172    54-226 (353)
227 2buj_A Serine/threonine-protei 100.0 6.9E-38 2.4E-42  254.0   8.1  207   11-241    68-296 (317)
228 1wak_A Serine/threonine-protei 100.0 6.8E-38 2.3E-42  261.3   7.9  152   12-172    76-295 (397)
229 2i6l_A Mitogen-activated prote 100.0 5.9E-37   2E-41  248.5  12.4  158   11-172    50-227 (320)
230 3aln_A Dual specificity mitoge 100.0 1.2E-37 4.3E-42  253.7   8.5  216    1-241    52-282 (327)
231 1blx_A Cyclin-dependent kinase 100.0 1.2E-36   4E-41  247.6  13.9  153   13-172    55-221 (326)
232 1z57_A Dual specificity protei 100.0 9.9E-37 3.4E-41  249.0  13.4  152   12-172    54-236 (339)
233 4e7w_A Glycogen synthase kinas 100.0 4.7E-37 1.6E-41  256.5  11.4  213   17-241    80-318 (394)
234 3eb0_A Putative uncharacterize 100.0 1.3E-36 4.5E-41  252.9  13.6  210   16-241    47-318 (383)
235 3ll6_A Cyclin G-associated kin 100.0 1.5E-37 5.2E-42  253.7   6.4  201   11-241    67-298 (337)
236 2eu9_A Dual specificity protei 100.0   9E-36 3.1E-40  244.8  15.2  152   12-172    59-241 (355)
237 3a99_A Proto-oncogene serine/t 100.0 7.3E-37 2.5E-41  248.6   8.5  192   13-241    90-290 (320)
238 3fhr_A MAP kinase-activated pr 100.0 1.6E-36 5.5E-41  248.2  10.5  199   20-241    73-284 (336)
239 1j1b_A Glycogen synthase kinas 100.0 1.3E-35 4.5E-40  249.7  16.1  212   16-241    94-333 (420)
240 1q8y_A SR protein kinase; tran 100.0 1.2E-36 4.2E-41  251.9   9.0  152   12-172    58-237 (373)
241 3e3p_A Protein kinase, putativ 100.0   1E-35 3.4E-40  245.4  14.4  156   12-172    62-234 (360)
242 3sv0_A Casein kinase I-like; t 100.0 6.6E-36 2.2E-40  254.9  13.5  208   13-240    46-267 (483)
243 2vx3_A Dual specificity tyrosi 100.0 1.5E-35   5E-40  246.5  15.2  154   12-172    93-260 (382)
244 2dyl_A Dual specificity mitoge 100.0 3.2E-36 1.1E-40  244.2  10.7  214    1-241    55-280 (318)
245 2pzi_A Probable serine/threoni 100.0 2.9E-36   1E-40  267.6  11.3  199    1-240   111-316 (681)
246 2iwi_A Serine/threonine-protei 100.0 2.9E-36 9.8E-41  244.1   9.9  192   13-241    78-280 (312)
247 3uqc_A Probable conserved tran 100.0 1.2E-34 4.1E-39  232.0  10.5  189    1-241    61-255 (286)
248 3m2w_A MAP kinase-activated pr 100.0 4.2E-34 1.4E-38  230.2  12.5  186   13-241    54-253 (299)
249 3dzo_A Rhoptry kinase domain;  100.0 1.3E-33 4.4E-38  237.1   8.8  192   11-240   120-359 (413)
250 2vuw_A Serine/threonine-protei 100.0 8.6E-34   3E-38  231.9   3.5  195   11-232    65-323 (336)
251 4azs_A Methyltransferase WBDD; 100.0 3.7E-33 1.3E-37  242.3   4.8  154   11-170   283-438 (569)
252 3en9_A Glycoprotease, O-sialog  99.9 2.6E-26 8.8E-31  198.4   4.6  149   13-170   383-538 (540)
253 1zar_A RIO2 kinase; serine kin  99.8 4.3E-20 1.5E-24  147.1   6.1  105   13-143   148-252 (282)
254 1zth_A RIO1 serine protein kin  99.5 1.2E-14   4E-19  114.2   8.1   97   14-118   115-219 (258)
255 4gyi_A RIO2 kinase; protein ki  99.3   4E-13 1.4E-17  110.4   3.6   71   44-119   186-266 (397)
256 3tm0_A Aminoglycoside 3'-phosp  99.1   3E-10   1E-14   89.0   7.9  103   13-116    53-212 (263)
257 1nd4_A Aminoglycoside 3'-phosp  99.0 4.1E-10 1.4E-14   87.9   6.8   99   14-116    58-213 (264)
258 3dxp_A Putative acyl-COA dehyd  98.8 7.8E-09 2.7E-13   84.7   7.3  105   13-117    80-248 (359)
259 3sg8_A APH(2'')-ID; antibiotic  98.6 1.9E-08 6.3E-13   80.6   2.8  157   12-171    53-288 (304)
260 4gkh_A Aminoglycoside 3'-phosp  98.3 2.2E-06 7.4E-11   67.1   9.0  104   13-116    63-222 (272)
261 3r70_A Aminoglycoside phosphot  98.1 7.1E-06 2.4E-10   66.0   7.9  102   13-118    71-238 (320)
262 3tdw_A Gentamicin resistance p  97.9 4.7E-05 1.6E-09   60.8   8.2   47   12-58     52-102 (306)
263 3ovc_A Hygromycin-B 4-O-kinase  97.6  0.0001 3.5E-09   60.3   7.0   43   15-57     77-122 (362)
264 3ats_A Putative uncharacterize  97.6 9.9E-05 3.4E-09   60.0   6.5   45   14-58     72-122 (357)
265 3d1u_A Putative fructosamine-3  97.0  0.0025 8.5E-08   50.3   8.0   41   12-56     54-97  (288)
266 2q83_A YTAA protein; 2635576,   96.9  0.0052 1.8E-07   49.2   9.2   32   86-117   221-252 (346)
267 3csv_A Aminoglycoside phosphot  96.7  0.0034 1.2E-07   50.4   6.8   34   86-119   182-219 (333)
268 2olc_A MTR kinase, methylthior  96.5  0.0049 1.7E-07   50.8   6.3   31   86-117   226-256 (397)
269 3feg_A Choline/ethanolamine ki  96.4  0.0034 1.2E-07   51.5   5.0   31   86-116   219-253 (379)
270 3jr1_A Putative fructosamine-3  96.4  0.0082 2.8E-07   47.9   6.8   44   13-56     72-118 (312)
271 3dxq_A Choline/ethanolamine ki  96.2  0.0031   1E-07   49.9   3.5   32   86-118   172-203 (301)
272 3f2s_A CK, chetk-alpha, cholin  96.0   0.007 2.4E-07   50.0   4.9   31   86-116   243-279 (401)
273 1nw1_A Choline kinase (49.2 KD  95.9   0.011 3.8E-07   49.3   5.6   39   14-56    120-159 (429)
274 2pyw_A Uncharacterized protein  93.7   0.053 1.8E-06   45.0   3.9   32   86-118   231-262 (420)
275 2ppq_A HSK, HK, homoserine kin  91.8   0.052 1.8E-06   43.0   1.3   32   86-117   186-217 (322)
276 4ann_A ESSB; membrane protein,  91.5    0.34 1.1E-05   36.2   5.4  122   19-172    36-159 (215)
277 4ano_A ESSB; membrane protein,  89.7       1 3.5E-05   33.7   6.5  114   27-172    48-164 (219)
278 1zyl_A Hypothetical protein YI  89.2    0.14 4.9E-06   40.6   1.8   30   86-117   194-223 (328)
279 3i1a_A Spectinomycin phosphotr  89.1    0.26 8.9E-06   39.5   3.2   33   86-118   205-237 (339)
280 3c5i_A Choline kinase; choline  87.9    0.24 8.3E-06   40.1   2.3   31   86-117   211-241 (369)
281 3oja_A Leucine-rich immune mol  87.7   0.043 1.5E-06   46.5  -2.3   32   11-42    321-352 (487)
282 2yle_A Protein spire homolog 1  86.8     1.7   6E-05   32.5   6.2   98   54-169    33-135 (229)
283 2qg7_A Ethanolamine kinase PV0  86.6    0.35 1.2E-05   40.7   2.6   36   17-56    152-188 (458)
284 3g15_A CK, chetk-alpha, cholin  82.6    0.67 2.3E-05   38.1   2.6   29   89-117   246-280 (401)
285 3mes_A Choline kinase; malaria  77.7       1 3.4E-05   37.4   2.0   31   86-117   261-291 (424)
286 3f7w_A Putative fructosamine-3  68.2     1.7 5.7E-05   33.7   1.2   25   86-111   187-211 (288)
287 2qg7_A Ethanolamine kinase PV0  39.0      57   0.002   27.1   5.8   32   52-83    175-211 (458)
288 3mes_A Choline kinase; malaria  32.1      41  0.0014   27.7   3.8   59   16-82    120-179 (424)
289 2x6h_A GH13170P, VPS34, phosph  22.7      52  0.0018   29.1   2.9   25   92-116   551-575 (696)
290 3arc_T Photosystem II reaction  20.6      90  0.0031   15.2   2.4   16  154-169    12-27  (32)

No 1  
>4gt4_A Tyrosine-protein kinase transmembrane receptor RO; ATP binding, phosphorylation, transferase; 2.41A {Homo sapiens} PDB: 3zzw_A
Probab=100.00  E-value=1.7e-53  Score=343.32  Aligned_cols=215  Identities=17%  Similarity=0.247  Sum_probs=172.3

Q ss_pred             CcccccccccccHHHHHHHHHHHHhcCCCcccceeeeeeeCCcceEEEEecCCCCHHHhhcCCC----------------
Q 044022            1 MKFYGHEYHRHTYGSCINNITYAAQMSHNHILKRIGCCLQTPIPILVFQSVEYGTLRDCIFGAP----------------   64 (241)
Q Consensus         1 iK~~~~~~~~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~~~~~~~lv~e~~~~~sL~~~l~~~~----------------   64 (241)
                      ||.+.........++|.+|+.++++|+|||||+++|+|..++..++|||||++|+|.+++....                
T Consensus        61 vK~l~~~~~~~~~~~f~~E~~il~~l~HpNIV~l~g~~~~~~~~~lV~Ey~~~G~L~~~L~~~~~~~~~~~~~~~~~~~~  140 (308)
T 4gt4_A           61 IKTLKDKAEGPLREEFRHEAMLRARLQHPNVVCLLGVVTKDQPLSMIFSYCSHGDLHEFLVMRSPHSDVGSTDDDRTVKS  140 (308)
T ss_dssp             EEECCC-CCC-CHHHHHHHHHHHHHCCCTTBCCEEEEECSSSSCEEEEECCSSCBHHHHHHTTCSSCCCC-----CCEEC
T ss_pred             EEEECcccChHHHHHHHHHHHHHHhCCCCCCCCcceEEEECCEEEEEEEcCCCCcHHHHHHhhCcccccccccccccccc
Confidence            4666555555667889999999999999999999999999999999999999999999985421                


Q ss_pred             ----chHHHHHHHHHHHhchhhcCCCCCceeccCCCCCeeecCCCCeEEeeccCceecCCCCcceeecccccCCCccCcc
Q 044022           65 ----LPRLKIASDIVNSLAYLHFGFPRPIVLRNFKTQNILFNEENVAKWFDFLLSISIPEGETHITTDRVIGTRGYSAPE  140 (241)
Q Consensus        65 ----~~~~~~~~~i~~~l~~lh~~~~~~ivh~dl~~~nil~~~~~~~~l~df~~~~~~~~~~~~~~~~~~~~~~~~~aPE  140 (241)
                          ..++.++.||+.||.|||   +++|+||||||+|||++.++.+||+|||+++...........+...||+.|+|||
T Consensus       141 ~l~~~~~~~i~~qia~gl~yLH---~~~iiHRDLK~~NILl~~~~~~Ki~DFGlar~~~~~~~~~~~~~~~gt~~ymAPE  217 (308)
T 4gt4_A          141 ALEPPDFVHLVAQIAAGMEYLS---SHHVVHKDLATRNVLVYDKLNVKISDLGLFREVYAADYYKLLGNSLLPIRWMAPE  217 (308)
T ss_dssp             CCCHHHHHHHHHHHHHHHHHHH---HTTCCCSCCSGGGEEECGGGCEEECCSCCBCGGGGGGCBCSSSSSCBCGGGCCHH
T ss_pred             CCCHHHHHHHHHHHHHHHHHHH---hCCCCCCCccccceEECCCCCEEECCcccceeccCCCceeEecccccCCcccCHH
Confidence                136789999999999999   8999999999999999999999999999998654433333334567899999999


Q ss_pred             cccccCCCcchhhHHHHHHHHHHHh-cCcccccccccCCCcccchHHHHHHHhhhcccCCCCCCccccCCCchhHHHHHH
Q 044022          141 YISICVLNEKSNVFSFGAFLFELLA-GRIHIWDLLKDTHDHGCFFNEYLKNYLEDKRFTGIPAPIIVQDIPCIEKEQQLH  219 (241)
Q Consensus       141 ~~~~~~~~~~~Di~s~G~~~~~~~~-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  219 (241)
                      ++.+..++.++|||||||++|||+| |..||....         ..+..... ..+...+.+     .        .++.
T Consensus       218 ~l~~~~~s~ksDVwSfGvvl~El~t~g~~Pf~~~~---------~~~~~~~i-~~~~~~~~p-----~--------~~~~  274 (308)
T 4gt4_A          218 AIMYGKFSIDSDIWSYGVVLWEVFSYGLQPYCGYS---------NQDVVEMI-RNRQVLPCP-----D--------DCPA  274 (308)
T ss_dssp             HHHHCCCCHHHHHHHHHHHHHHHHTTTCCTTTTCC---------HHHHHHHH-HTTCCCCCC-----T--------TCCH
T ss_pred             HHhCCCCCccchhhhHHHHHHHHHhCCCCCCCCCC---------HHHHHHHH-HcCCCCCCc-----c--------cchH
Confidence            9999999999999999999999998 899996521         12222222 222222211     1        2336


Q ss_pred             HHHHHHHHhccCCCCCCCCCCC
Q 044022          220 ASAQLTLECVNNSPEDRPTMVD  241 (241)
Q Consensus       220 ~~~~l~~~cl~~~p~~Rpt~~e  241 (241)
                      .+.+|+.+||+.||++|||+.|
T Consensus       275 ~~~~li~~C~~~dP~~RPs~~e  296 (308)
T 4gt4_A          275 WVYALMIECWNEFPSRRPRFKD  296 (308)
T ss_dssp             HHHHHHHHHTCSSGGGSCCHHH
T ss_pred             HHHHHHHHHcCCChhHCcCHHH
Confidence            7889999999999999999854


No 2  
>4asz_A BDNF/NT-3 growth factors receptor; transferase, TRKA, TRKB; 1.70A {Homo sapiens} PDB: 4at3_A* 4at4_A* 4at5_A* 3v5q_A*
Probab=100.00  E-value=1.3e-53  Score=342.68  Aligned_cols=214  Identities=22%  Similarity=0.327  Sum_probs=172.0

Q ss_pred             CcccccccccccHHHHHHHHHHHHhcCCCcccceeeeeeeCCcceEEEEecCCCCHHHhhcCCC----------------
Q 044022            1 MKFYGHEYHRHTYGSCINNITYAAQMSHNHILKRIGCCLQTPIPILVFQSVEYGTLRDCIFGAP----------------   64 (241)
Q Consensus         1 iK~~~~~~~~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~~~~~~~lv~e~~~~~sL~~~l~~~~----------------   64 (241)
                      ||.+... .....++|.+|+++|++|+|||||+++|+|.+++..++|||||++|+|.+++....                
T Consensus        48 vK~l~~~-~~~~~~~f~~E~~il~~l~HpnIV~l~g~~~~~~~~~lV~Ey~~~G~L~~~l~~~~~~~~~~~~~~~~~~l~  126 (299)
T 4asz_A           48 VKTLKDA-SDNARKDFHREAELLTNLQHEHIVKFYGVCVEGDPLIMVFEYMKHGDLNKFLRAHGPDAVLMAEGNPPTELT  126 (299)
T ss_dssp             EEEECSC-CHHHHHHHHHHHHHHTTCCCTTBCCEEEEECSSSSEEEEEECCTTCBHHHHHHHTSHHHHHC----CCCCCC
T ss_pred             EEEeCCC-ChHHHHHHHHHHHHHHhCCCCCCccEEEEEeeCCEEEEEEEcCCCCcHHHHHHhcCcccccccccCCCCCCC
Confidence            3555432 33456789999999999999999999999999999999999999999999996431                


Q ss_pred             -chHHHHHHHHHHHhchhhcCCCCCceeccCCCCCeeecCCCCeEEeeccCceecCCCCcceeecccccCCCccCccccc
Q 044022           65 -LPRLKIASDIVNSLAYLHFGFPRPIVLRNFKTQNILFNEENVAKWFDFLLSISIPEGETHITTDRVIGTRGYSAPEYIS  143 (241)
Q Consensus        65 -~~~~~~~~~i~~~l~~lh~~~~~~ivh~dl~~~nil~~~~~~~~l~df~~~~~~~~~~~~~~~~~~~~~~~~~aPE~~~  143 (241)
                       ..++.++.||+.||.|||   +++|+||||||+|||++.++.+||+|||+++...............||+.|+|||++.
T Consensus       127 ~~~~~~i~~qia~gl~yLH---~~~iiHRDlKp~NILl~~~~~~Ki~DFGla~~~~~~~~~~~~~~~~gt~~ymAPE~~~  203 (299)
T 4asz_A          127 QSQMLHIAQQIAAGMVYLA---SQHFVHRDLATRNCLVGENLLVKIGDFGMSRDVYSTDYYRVGGHTMLPIRWMPPESIM  203 (299)
T ss_dssp             HHHHHHHHHHHHHHHHHHH---HTTCCCSCCSGGGEEECGGGCEEECCCSCHHHHTGGGCEEETTTEEECGGGCCHHHHH
T ss_pred             HHHHHHHHHHHHHHHHHHH---hCCcccCccCHhhEEECCCCcEEECCcccceecCCCCceeecCceecChhhcCHHHHc
Confidence             146889999999999999   8999999999999999999999999999998665444333334456899999999999


Q ss_pred             ccCCCcchhhHHHHHHHHHHHh-cCcccccccccCCCcccchHHHHHHHhhhcccCCCCCCccccCCCchhHHHHHHHHH
Q 044022          144 ICVLNEKSNVFSFGAFLFELLA-GRIHIWDLLKDTHDHGCFFNEYLKNYLEDKRFTGIPAPIIVQDIPCIEKEQQLHASA  222 (241)
Q Consensus       144 ~~~~~~~~Di~s~G~~~~~~~~-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  222 (241)
                      +..++.++|||||||++|||+| |+.||....         ..+..... ..+.....+     .        .+++.+.
T Consensus       204 ~~~~~~k~DVwS~Gvvl~Ellt~G~~Pf~~~~---------~~~~~~~i-~~~~~~~~p-----~--------~~~~~~~  260 (299)
T 4asz_A          204 YRKFTTESDVWSLGVVLWEIFTYGKQPWYQLS---------NNEVIECI-TQGRVLQRP-----R--------TCPQEVY  260 (299)
T ss_dssp             HCCCCHHHHHHHHHHHHHHHHTTTCCTTTTSC---------HHHHHHHH-HHTCCCCCC-----T--------TCCHHHH
T ss_pred             CCCCCchhhHHHHHHHHHHHHcCCCCCCCCCC---------HHHHHHHH-HcCCCCCCC-----c--------cchHHHH
Confidence            9999999999999999999998 899996521         12222222 222222211     1        2236789


Q ss_pred             HHHHHhccCCCCCCCCCCC
Q 044022          223 QLTLECVNNSPEDRPTMVD  241 (241)
Q Consensus       223 ~l~~~cl~~~p~~Rpt~~e  241 (241)
                      +|+.+||+.||++|||++|
T Consensus       261 ~li~~cl~~dP~~RPs~~~  279 (299)
T 4asz_A          261 ELMLGCWQREPHMRKNIKG  279 (299)
T ss_dssp             HHHHHHTCSSGGGSCCHHH
T ss_pred             HHHHHHcCCChhHCcCHHH
Confidence            9999999999999999853


No 3  
>3omv_A RAF proto-oncogene serine/threonine-protein kinas; serine/threonine-protein kinase, transferase; HET: SM5; 4.00A {Homo sapiens}
Probab=100.00  E-value=2.9e-52  Score=335.16  Aligned_cols=210  Identities=21%  Similarity=0.296  Sum_probs=159.2

Q ss_pred             cccHHHHHHHHHHHHhcCCCcccceeeeeeeCCcceEEEEecCCCCHHHhhcCCC--c---hHHHHHHHHHHHhchhhcC
Q 044022           10 RHTYGSCINNITYAAQMSHNHILKRIGCCLQTPIPILVFQSVEYGTLRDCIFGAP--L---PRLKIASDIVNSLAYLHFG   84 (241)
Q Consensus        10 ~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~~~~~~~lv~e~~~~~sL~~~l~~~~--~---~~~~~~~~i~~~l~~lh~~   84 (241)
                      ....++|.+|++++++++|||||+++|++.+ +.+++|||||++|+|.+++....  .   .++.++.||+.||.|||  
T Consensus        73 ~~~~~~f~~E~~il~~l~HpNIV~l~g~~~~-~~~~iVmEy~~gGsL~~~l~~~~~~l~~~~~~~i~~qia~gL~yLH--  149 (307)
T 3omv_A           73 PEQFQAFRNEVAVLRKTRHVNILLFMGYMTK-DNLAIVTQWCEGSSLYKHLHVQETKFQMFQLIDIARQTAQGMDYLH--  149 (307)
T ss_dssp             HHHHHHHHHHHHHHTTCCCTTBCCEEEEECS-SSCEEEEECCSSCBHHHHHHTSCCCCCHHHHHHHHHHHHHHHHHHH--
T ss_pred             HHHHHHHHHHHHHHHhCCCCCEeeEEEEEEC-CeEEEEEEcCCCCCHHHHHhhcCCCCCHHHHHHHHHHHHHHHHHHH--
Confidence            3456789999999999999999999998864 56899999999999999996542  2   57889999999999999  


Q ss_pred             CCCCceeccCCCCCeeecCCCCeEEeeccCceecCCCCcceeecccccCCCccCcccccc---cCCCcchhhHHHHHHHH
Q 044022           85 FPRPIVLRNFKTQNILFNEENVAKWFDFLLSISIPEGETHITTDRVIGTRGYSAPEYISI---CVLNEKSNVFSFGAFLF  161 (241)
Q Consensus        85 ~~~~ivh~dl~~~nil~~~~~~~~l~df~~~~~~~~~~~~~~~~~~~~~~~~~aPE~~~~---~~~~~~~Di~s~G~~~~  161 (241)
                       +++|+||||||+|||++.++.+||+|||+++...............||+.|+|||++.+   ..++.++|||||||++|
T Consensus       150 -~~~IiHRDlKp~NILl~~~~~~Ki~DFGla~~~~~~~~~~~~~~~~GT~~ymAPE~l~~~~~~~y~~ksDVwS~Gvvl~  228 (307)
T 3omv_A          150 -AKNIIHRDMKSNNIFLHEGLTVKIGDFGLATVKSRWSGSQQVEQPTGSVLWMAPEVIRMQDNNPFSFQSDVYSYGIVLY  228 (307)
T ss_dssp             -HTTCBCSCCCSSSEEEETTEEEEECCCSSCBC------------CCCCTTSCCHHHHHCCSSCCCCHHHHHHHHHHHHH
T ss_pred             -HCCccCCccCHHHEEECCCCcEEEeeccCceecccCCcceeecccccCCCccCHHHhhccCCCCCCcHHHhHhHHHHHH
Confidence             89999999999999999999999999999986554333333345689999999999964   35889999999999999


Q ss_pred             HHHhcCcccccccccCCCcccchHHHHHHHhhhcccCCCCCCccccCCCchhHHHHHHHHHHHHHHhccCCCCCCCCCCC
Q 044022          162 ELLAGRIHIWDLLKDTHDHGCFFNEYLKNYLEDKRFTGIPAPIIVQDIPCIEKEQQLHASAQLTLECVNNSPEDRPTMVD  241 (241)
Q Consensus       162 ~~~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~cl~~~p~~Rpt~~e  241 (241)
                      ||+||+.||.....         ..........+...+.. +....        .+++.+.+|+.+||+.||++|||+.|
T Consensus       229 Elltg~~Pf~~~~~---------~~~~~~~~~~~~~~p~~-~~~~~--------~~~~~l~~li~~cl~~dP~~RPs~~e  290 (307)
T 3omv_A          229 ELMTGELPYSHINN---------RDQIIFMVGRGYASPDL-SKLYK--------NCPKAMKRLVADCVKKVKEERPLFPQ  290 (307)
T ss_dssp             HHHHSSCTTTTCCC---------HHHHHHHHHTTCCCCCS-TTSCT--------TSCHHHHHHHHHHTCSSSTTSCCHHH
T ss_pred             HHHHCCCCCCCCCh---------HHHHHHHHhcCCCCCCc-ccccc--------cchHHHHHHHHHHcCCCHhHCcCHHH
Confidence            99999999964211         11222222222111100 11112        23367899999999999999999853


No 4  
>4aoj_A High affinity nerve growth factor receptor; transferase, inhibitor; HET: V4Z; 2.75A {Homo sapiens}
Probab=100.00  E-value=1.7e-52  Score=340.50  Aligned_cols=214  Identities=21%  Similarity=0.291  Sum_probs=163.1

Q ss_pred             CcccccccccccHHHHHHHHHHHHhcCCCcccceeeeeeeCCcceEEEEecCCCCHHHhhcCCC----------------
Q 044022            1 MKFYGHEYHRHTYGSCINNITYAAQMSHNHILKRIGCCLQTPIPILVFQSVEYGTLRDCIFGAP----------------   64 (241)
Q Consensus         1 iK~~~~~~~~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~~~~~~~lv~e~~~~~sL~~~l~~~~----------------   64 (241)
                      ||.+.. ......++|.+|+++|++|+|||||+++|+|.+.+..++|||||++|+|.++++...                
T Consensus        76 vK~l~~-~~~~~~~~f~~E~~il~~l~HpnIV~l~g~~~~~~~~~lV~Ey~~~G~L~~~l~~~~~~~~~~~~~~~~~~~~  154 (329)
T 4aoj_A           76 VKALKE-ASESARQDFQREAELLTMLQHQHIVRFFGVCTEGRPLLMVFEYMRHGDLNRFLRSHGPDAKLLAGGEDVAPGP  154 (329)
T ss_dssp             EEEESC-CSHHHHHHHHHHHHHHTTCCCTTBCCEEEEECSSSSEEEEEECCTTCBHHHHHHTSSCC-----------CCS
T ss_pred             EEEECc-CCHHHHHHHHHHHHHHHhCCCCCCCcEEEEEEECCEEEEEEEcCCCCcHHHHHHhcCcccccccccccccCCC
Confidence            455543 233456789999999999999999999999999999999999999999999986531                


Q ss_pred             ---chHHHHHHHHHHHhchhhcCCCCCceeccCCCCCeeecCCCCeEEeeccCceecCCCCcceeecccccCCCccCccc
Q 044022           65 ---LPRLKIASDIVNSLAYLHFGFPRPIVLRNFKTQNILFNEENVAKWFDFLLSISIPEGETHITTDRVIGTRGYSAPEY  141 (241)
Q Consensus        65 ---~~~~~~~~~i~~~l~~lh~~~~~~ivh~dl~~~nil~~~~~~~~l~df~~~~~~~~~~~~~~~~~~~~~~~~~aPE~  141 (241)
                         ..++.++.||+.||.|||   +++|+||||||+|||++.++.+||+|||+++...............||+.|+|||+
T Consensus       155 l~~~~~~~i~~qia~gl~yLH---~~~iiHRDLKp~NILl~~~~~~Ki~DFGla~~~~~~~~~~~~~~~~gt~~ymAPE~  231 (329)
T 4aoj_A          155 LGLGQLLAVASQVAAGMVYLA---GLHFVHRDLATRNCLVGQGLVVKIGDFGMSRDIYSTDYYRVGGRTMLPIRWMPPES  231 (329)
T ss_dssp             CCHHHHHHHHHHHHHHHHHHH---HTTCCCSCCCGGGEEEETTTEEEECCCC----------------CCCCGGGCCHHH
T ss_pred             CCHHHHHHHHHHHHHHHHHHh---cCCeecccccHhhEEECCCCcEEEcccccceeccCCCcceecCcccccccccChhh
Confidence               146789999999999999   89999999999999999999999999999986654433333345679999999999


Q ss_pred             ccccCCCcchhhHHHHHHHHHHHh-cCcccccccccCCCcccchHHHHHHHhhhcccCCCCCCccccCCCchhHHHHHHH
Q 044022          142 ISICVLNEKSNVFSFGAFLFELLA-GRIHIWDLLKDTHDHGCFFNEYLKNYLEDKRFTGIPAPIIVQDIPCIEKEQQLHA  220 (241)
Q Consensus       142 ~~~~~~~~~~Di~s~G~~~~~~~~-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  220 (241)
                      +.+..++.++|||||||++|||+| |+.||....         ..+...... .+.....+     .        .+++.
T Consensus       232 ~~~~~~~~~sDvwS~Gvvl~Ellt~G~~Pf~~~~---------~~~~~~~i~-~g~~~~~p-----~--------~~~~~  288 (329)
T 4aoj_A          232 ILYRKFTTESDVWSFGVVLWEIFTYGKQPWYQLS---------NTEAIDCIT-QGRELERP-----R--------ACPPE  288 (329)
T ss_dssp             HTTCCCCHHHHHHHHHHHHHHHHTTSCCTTCSSC---------HHHHHHHHH-HTCCCCCC-----T--------TCCHH
T ss_pred             hcCCCCCccccccchHHHHHHHHcCCCCCCCCCC---------HHHHHHHHH-cCCCCCCc-----c--------cccHH
Confidence            999999999999999999999999 899996522         122222222 22211111     1        22367


Q ss_pred             HHHHHHHhccCCCCCCCCCCC
Q 044022          221 SAQLTLECVNNSPEDRPTMVD  241 (241)
Q Consensus       221 ~~~l~~~cl~~~p~~Rpt~~e  241 (241)
                      +.+|+.+||+.||++|||++|
T Consensus       289 ~~~li~~cl~~dP~~RPs~~e  309 (329)
T 4aoj_A          289 VYAIMRGCWQREPQQRHSIKD  309 (329)
T ss_dssp             HHHHHHHHCCSSTTTSCCHHH
T ss_pred             HHHHHHHHcCcChhHCcCHHH
Confidence            899999999999999999864


No 5  
>4aw0_A HPDK1, 3-phosphoinositide-dependent protein kinase 1; transferase, allosteric regulation, allosteric site, phosphorylation, AGC protein kinase; HET: SEP ATP MJF; 1.43A {Homo sapiens} PDB: 3hrc_A* 3hrf_A* 4a06_A* 4a07_A* 3rcj_A* 4aw1_A* 3rwq_A* 3sc1_A* 3qd0_A* 2r7b_A* 3ion_A* 3qcq_A* 3qcs_A* 3qcx_A* 3qcy_A* 3iop_A* 3qd3_A* 3qd4_A* 3h9o_A* 1uu3_A* ...
Probab=100.00  E-value=1.1e-51  Score=331.35  Aligned_cols=214  Identities=16%  Similarity=0.207  Sum_probs=173.3

Q ss_pred             Cccccccc--ccccHHHHHHHHHHHHhcCCCcccceeeeeeeCCcceEEEEecCCCCHHHhhcCCC----chHHHHHHHH
Q 044022            1 MKFYGHEY--HRHTYGSCINNITYAAQMSHNHILKRIGCCLQTPIPILVFQSVEYGTLRDCIFGAP----LPRLKIASDI   74 (241)
Q Consensus         1 iK~~~~~~--~~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~~~~~~~lv~e~~~~~sL~~~l~~~~----~~~~~~~~~i   74 (241)
                      ||++.+..  .....+.+.+|+++|++|+|||||++++++.+++.+|+|||||+||+|.+++....    .....++.||
T Consensus        62 iK~i~k~~~~~~~~~~~~~~E~~il~~l~HpnIv~l~~~~~~~~~~yivmEy~~gG~L~~~i~~~~~l~e~~~~~~~~qi  141 (311)
T 4aw0_A           62 IKILEKRHIIKENKVPYVTRERDVMSRLDHPFFVKLYFTFQDDEKLYFGLSYAKNGELLKYIRKIGSFDETCTRFYTAEI  141 (311)
T ss_dssp             EEEEEHHHHHHTTCHHHHHHHHHHHTTCCCTTBCCEEEEEECSSEEEEEECCCTTEEHHHHHHHHSSCCHHHHHHHHHHH
T ss_pred             EEEEEHHHCCCHHHHHHHHHHHHHHHhCCCCCCCeEEEEEEeCCEEEEEEecCCCCCHHHHHHHcCCCCHHHHHHHHHHH
Confidence            35554322  33456789999999999999999999999999999999999999999999986542    2467899999


Q ss_pred             HHHhchhhcCCCCCceeccCCCCCeeecCCCCeEEeeccCceecCCCCcceeecccccCCCccCcccccccCCCcchhhH
Q 044022           75 VNSLAYLHFGFPRPIVLRNFKTQNILFNEENVAKWFDFLLSISIPEGETHITTDRVIGTRGYSAPEYISICVLNEKSNVF  154 (241)
Q Consensus        75 ~~~l~~lh~~~~~~ivh~dl~~~nil~~~~~~~~l~df~~~~~~~~~~~~~~~~~~~~~~~~~aPE~~~~~~~~~~~Di~  154 (241)
                      +.||.|||   +++|+||||||+|||++.++.+||+|||+++............+.+||+.|+|||++.+..++.++|||
T Consensus       142 ~~al~ylH---~~~IiHRDlKPeNILl~~~g~vKl~DFGla~~~~~~~~~~~~~~~~GTp~YmAPEvl~~~~y~~~~DiW  218 (311)
T 4aw0_A          142 VSALEYLH---GKGIIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANSFVGTAQYVSPELLTEKSACKSSDLW  218 (311)
T ss_dssp             HHHHHHHH---HTTEECSCCSGGGEEECTTSCEEECCCTTCEECCTTTTCCCBCCCCSCGGGCCHHHHHHSCBCHHHHHH
T ss_pred             HHHHHHHH---HCCCccCCCCHHHeEEcCCCCEEEEEcCCceecCCCCCcccccCcccCcccCCHHHHcCCCCCcHHHHH
Confidence            99999999   999999999999999999999999999999987654443444567899999999999999999999999


Q ss_pred             HHHHHHHHHHhcCcccccccccCCCcccchHHHHHHHhhhcccCCCCCCccccCCCchhHHHHHHHHHHHHHHhccCCCC
Q 044022          155 SFGAFLFELLAGRIHIWDLLKDTHDHGCFFNEYLKNYLEDKRFTGIPAPIIVQDIPCIEKEQQLHASAQLTLECVNNSPE  234 (241)
Q Consensus       155 s~G~~~~~~~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~cl~~~p~  234 (241)
                      |+||++|+|++|+.||...         ...+......... + ..     ...        .++++.+|+.+||+.||+
T Consensus       219 SlGvilyeml~G~~PF~~~---------~~~~~~~~i~~~~-~-~~-----p~~--------~s~~~~dli~~lL~~dp~  274 (311)
T 4aw0_A          219 ALGCIIYQLVAGLPPFRAG---------NEGLIFAKIIKLE-Y-DF-----PEK--------FFPKARDLVEKLLVLDAT  274 (311)
T ss_dssp             HHHHHHHHHHHSSCSSCCS---------SHHHHHHHHHHTC-C-CC-----CTT--------CCHHHHHHHHHHSCSSGG
T ss_pred             HHHHHHHHHHhCCCCCCCC---------CHHHHHHHHHcCC-C-CC-----Ccc--------cCHHHHHHHHHHccCCHh
Confidence            9999999999999999541         1222222222211 1 11     111        225688999999999999


Q ss_pred             CCCCCCC
Q 044022          235 DRPTMVD  241 (241)
Q Consensus       235 ~Rpt~~e  241 (241)
                      +|||++|
T Consensus       275 ~R~t~~e  281 (311)
T 4aw0_A          275 KRLGCEE  281 (311)
T ss_dssp             GSTTSGG
T ss_pred             HCcChHH
Confidence            9999864


No 6  
>4fih_A Serine/threonine-protein kinase PAK 4; kinase domain, protein ATP binding, phosphorylation, transferase; HET: SEP; 1.97A {Homo sapiens} PDB: 4fig_A* 4fif_A* 4fii_A* 4fij_A*
Probab=100.00  E-value=4.1e-51  Score=332.57  Aligned_cols=214  Identities=16%  Similarity=0.246  Sum_probs=171.2

Q ss_pred             CcccccccccccHHHHHHHHHHHHhcCCCcccceeeeeeeCCcceEEEEecCCCCHHHhhcCCCc---hHHHHHHHHHHH
Q 044022            1 MKFYGHEYHRHTYGSCINNITYAAQMSHNHILKRIGCCLQTPIPILVFQSVEYGTLRDCIFGAPL---PRLKIASDIVNS   77 (241)
Q Consensus         1 iK~~~~~~~~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~~~~~~~lv~e~~~~~sL~~~l~~~~~---~~~~~~~~i~~~   77 (241)
                      ||++... .....+.+.+|+++|++++|||||+++++|..++.+|+|||||+||+|.+++.....   ....++.||+.|
T Consensus       104 iK~i~~~-~~~~~~~~~~Ei~il~~l~HpnIV~l~~~~~~~~~~~ivmEy~~gg~L~~~l~~~~l~e~~~~~~~~qi~~a  182 (346)
T 4fih_A          104 VKKMDLR-KQQRRELLFNEVVIMRDYQHENVVEMYNSYLVGDELWVVMEFLEGGALTDIVTHTRMNEEQIAAVCLAVLQA  182 (346)
T ss_dssp             EEEEEGG-GCSSGGGGHHHHHHHHHCCCTTBCCEEEEEEETTEEEEEECCCTTEEHHHHHHHSCCCHHHHHHHHHHHHHH
T ss_pred             EEEEecC-chhHHHHHHHHHHHHHhCCCCCCCcEEEEEEECCEEEEEEeCCCCCcHHHHHHcCCCCHHHHHHHHHHHHHH
Confidence            4555433 234567789999999999999999999999999999999999999999999876543   467899999999


Q ss_pred             hchhhcCCCCCceeccCCCCCeeecCCCCeEEeeccCceecCCCCcceeecccccCCCccCcccccccCCCcchhhHHHH
Q 044022           78 LAYLHFGFPRPIVLRNFKTQNILFNEENVAKWFDFLLSISIPEGETHITTDRVIGTRGYSAPEYISICVLNEKSNVFSFG  157 (241)
Q Consensus        78 l~~lh~~~~~~ivh~dl~~~nil~~~~~~~~l~df~~~~~~~~~~~~~~~~~~~~~~~~~aPE~~~~~~~~~~~Di~s~G  157 (241)
                      |.|||   +++|+||||||+|||++.++.+||+|||+++........  ....+||+.|+|||++.+..++.++||||||
T Consensus       183 L~ylH---~~~IiHRDlKp~NILl~~~g~vKl~DFGla~~~~~~~~~--~~~~~GTp~YmAPEvl~~~~y~~~~DiWSlG  257 (346)
T 4fih_A          183 LSVLH---AQGVIHRDIKSDSILLTHDGRVKLSDFGFCAQVSKEVPR--RKSLVGTPYWMAPELISRLPYGPEVDIWSLG  257 (346)
T ss_dssp             HHHHH---HTTEECCCCSGGGEEECTTCCEEECCCTTCEECCSSSCC--BCCCCSCGGGCCHHHHTTCCBCTHHHHHHHH
T ss_pred             HHHHH---HCCcccccCCHHHEEECCCCCEEEecCcCceecCCCCCc--ccccccCcCcCCHHHHCCCCCCcHHHHHHHH
Confidence            99999   999999999999999999999999999999876543322  2456899999999999999999999999999


Q ss_pred             HHHHHHHhcCcccccccccCCCcccchHHHHHHHhhhcccCCCCCCccccCCCchhHHHHHHHHHHHHHHhccCCCCCCC
Q 044022          158 AFLFELLAGRIHIWDLLKDTHDHGCFFNEYLKNYLEDKRFTGIPAPIIVQDIPCIEKEQQLHASAQLTLECVNNSPEDRP  237 (241)
Q Consensus       158 ~~~~~~~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~cl~~~p~~Rp  237 (241)
                      |++|||++|+.||...         ...+......... ......   .        ...++++.+|+.+||+.||++||
T Consensus       258 vilyeml~G~~PF~~~---------~~~~~~~~i~~~~-~~~~~~---~--------~~~s~~~~dli~~~L~~dP~~R~  316 (346)
T 4fih_A          258 IMVIEMVDGEPPYFNE---------PPLKAMKMIRDNL-PPRLKN---L--------HKVSPSLKGFLDRLLVRDPAQRA  316 (346)
T ss_dssp             HHHHHHHHSSCTTTTS---------CHHHHHHHHHHSS-CCCCSC---G--------GGSCHHHHHHHHHHSCSSTTTSC
T ss_pred             HHHHHHHHCCCCCCCc---------CHHHHHHHHHcCC-CCCCCc---c--------ccCCHHHHHHHHHHcCCChhHCc
Confidence            9999999999999541         1122222222111 111110   0        12336789999999999999999


Q ss_pred             CCCC
Q 044022          238 TMVD  241 (241)
Q Consensus       238 t~~e  241 (241)
                      |++|
T Consensus       317 ta~e  320 (346)
T 4fih_A          317 TAAE  320 (346)
T ss_dssp             CHHH
T ss_pred             CHHH
Confidence            9864


No 7  
>4b9d_A Serine/threonine-protein kinase NEK1; transferase, inhibitor; HET: CK7; 1.90A {Homo sapiens} PDB: 4apc_A*
Probab=100.00  E-value=2.4e-51  Score=334.43  Aligned_cols=213  Identities=20%  Similarity=0.225  Sum_probs=169.8

Q ss_pred             Cccccccc-ccccHHHHHHHHHHHHhcCCCcccceeeeeeeCCcceEEEEecCCCCHHHhhcCCC------chHHHHHHH
Q 044022            1 MKFYGHEY-HRHTYGSCINNITYAAQMSHNHILKRIGCCLQTPIPILVFQSVEYGTLRDCIFGAP------LPRLKIASD   73 (241)
Q Consensus         1 iK~~~~~~-~~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~~~~~~~lv~e~~~~~sL~~~l~~~~------~~~~~~~~~   73 (241)
                      ||++.... .....++|.+|+++|++|+|||||++++++.+++.+|+|||||+||+|.+++....      .....++.|
T Consensus        54 iK~i~~~~~~~~~~~~~~~E~~il~~l~HpnIV~~~~~~~~~~~~yiVmEy~~gg~L~~~i~~~~~~~~~e~~~~~~~~q  133 (350)
T 4b9d_A           54 IKEINISRMSSKEREESRREVAVLANMKHPNIVQYRESFEENGSLYIVMDYCEGGDLFKRINAQKGVLFQEDQILDWFVQ  133 (350)
T ss_dssp             EEEEECTTSCHHHHHHHHHHHHHHHHCCCTTBCCEEEEEEETTEEEEEEECCTTCBHHHHHHHTTTCCCCHHHHHHHHHH
T ss_pred             EEEEehHHCCHHHHHHHHHHHHHHHHCCCCCCCcEEEEEEECCEEEEEEeCCCCCcHHHHHHHcCCCCCCHHHHHHHHHH
Confidence            45554332 33456789999999999999999999999999999999999999999999985431      146789999


Q ss_pred             HHHHhchhhcCCCCCceeccCCCCCeeecCCCCeEEeeccCceecCCCCcceeecccccCCCccCcccccccCCCcchhh
Q 044022           74 IVNSLAYLHFGFPRPIVLRNFKTQNILFNEENVAKWFDFLLSISIPEGETHITTDRVIGTRGYSAPEYISICVLNEKSNV  153 (241)
Q Consensus        74 i~~~l~~lh~~~~~~ivh~dl~~~nil~~~~~~~~l~df~~~~~~~~~~~~~~~~~~~~~~~~~aPE~~~~~~~~~~~Di  153 (241)
                      |+.||.|||   +++|+||||||+|||++.++.+||+|||+++.......  .....+||+.|+|||++.+..++.++||
T Consensus       134 i~~aL~ylH---~~~IiHRDlKp~NILl~~~g~vKl~DFGla~~~~~~~~--~~~~~~GT~~YmAPE~l~~~~y~~~~Di  208 (350)
T 4b9d_A          134 ICLALKHVH---DRKILHRDIKSQNIFLTKDGTVQLGDFGIARVLNSTVE--LARACIGTPYYLSPEICENKPYNNKSDI  208 (350)
T ss_dssp             HHHHHHHHH---HTTCEETTCCGGGEEECTTCCEEECSTTEESCCCHHHH--HHHHHHSCCTTCCHHHHTTCCCCHHHHH
T ss_pred             HHHHHHHHH---HCCeeeccCCHHHEEECCCCCEEEcccccceeecCCcc--cccccCCCccccCHHHHCCCCCCcHHHH
Confidence            999999999   99999999999999999999999999999976543211  1234579999999999999999999999


Q ss_pred             HHHHHHHHHHHhcCcccccccccCCCcccchHHHHHHHhhhcccCCCCCCccccCCCchhHHHHHHHHHHHHHHhccCCC
Q 044022          154 FSFGAFLFELLAGRIHIWDLLKDTHDHGCFFNEYLKNYLEDKRFTGIPAPIIVQDIPCIEKEQQLHASAQLTLECVNNSP  233 (241)
Q Consensus       154 ~s~G~~~~~~~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~cl~~~p  233 (241)
                      |||||++|+|++|+.||...         ...+....... +.+...     ..        ..+.++.+|+.+||+.||
T Consensus       209 wSlGvilyemltG~~PF~~~---------~~~~~~~~i~~-~~~~~~-----~~--------~~s~~~~~li~~~L~~dP  265 (350)
T 4b9d_A          209 WALGCVLYELCTLKHAFEAG---------SMKNLVLKIIS-GSFPPV-----SL--------HYSYDLRSLVSQLFKRNP  265 (350)
T ss_dssp             HHHHHHHHHHHHSSCSCCCS---------SHHHHHHHHHH-TCCCCC-----CT--------TSCHHHHHHHHHHTCSSG
T ss_pred             HHHHHHHHHHHHCCCCCCCc---------CHHHHHHHHHc-CCCCCC-----Cc--------cCCHHHHHHHHHHccCCh
Confidence            99999999999999999541         22222332222 211111     11        123578999999999999


Q ss_pred             CCCCCCCC
Q 044022          234 EDRPTMVD  241 (241)
Q Consensus       234 ~~Rpt~~e  241 (241)
                      ++|||++|
T Consensus       266 ~~R~s~~e  273 (350)
T 4b9d_A          266 RDRPSVNS  273 (350)
T ss_dssp             GGSCCHHH
T ss_pred             hHCcCHHH
Confidence            99999854


No 8  
>3fpq_A Serine/threonine-protein kinase WNK1; protein serine/threonine kinase, transferase, ATP-BIND kinase, nucleotide-binding, phosphoprotein; 1.80A {Rattus norvegicus}
Probab=100.00  E-value=1e-50  Score=323.99  Aligned_cols=202  Identities=17%  Similarity=0.255  Sum_probs=158.1

Q ss_pred             ccHHHHHHHHHHHHhcCCCcccceeeeeee----CCcceEEEEecCCCCHHHhhcCCCc----hHHHHHHHHHHHhchhh
Q 044022           11 HTYGSCINNITYAAQMSHNHILKRIGCCLQ----TPIPILVFQSVEYGTLRDCIFGAPL----PRLKIASDIVNSLAYLH   82 (241)
Q Consensus        11 ~~~~~~~~e~~~l~~l~h~~iv~~~~~~~~----~~~~~lv~e~~~~~sL~~~l~~~~~----~~~~~~~~i~~~l~~lh   82 (241)
                      ...++|.+|++++++|+|||||+++++|..    ++.+++|||||++|+|.+++.....    ....++.||+.||.|||
T Consensus        67 ~~~~~~~~E~~il~~l~HpnIV~~~~~~~~~~~~~~~~~lvmEy~~gg~L~~~l~~~~~l~~~~~~~~~~qi~~aL~ylH  146 (290)
T 3fpq_A           67 SERQRFKEEAEMLKGLQHPNIVRFYDSWESTVKGKKCIVLVTELMTSGTLKTYLKRFKVMKIKVLRSWCRQILKGLQFLH  146 (290)
T ss_dssp             HHHHHHHHHHHHHHTCCCTTBCCEEEEEEEEETTEEEEEEEEECCCSCBHHHHHHHHSSCCHHHHHHHHHHHHHHHHHHH
T ss_pred             HHHHHHHHHHHHHHhCCCCCCCcEEEEEeeccCCCcEEEEEEeCCCCCCHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHH
Confidence            456779999999999999999999999875    3468999999999999999965422    46789999999999999


Q ss_pred             cCCCCC--ceeccCCCCCeeecC-CCCeEEeeccCceecCCCCcceeecccccCCCccCcccccccCCCcchhhHHHHHH
Q 044022           83 FGFPRP--IVLRNFKTQNILFNE-ENVAKWFDFLLSISIPEGETHITTDRVIGTRGYSAPEYISICVLNEKSNVFSFGAF  159 (241)
Q Consensus        83 ~~~~~~--ivh~dl~~~nil~~~-~~~~~l~df~~~~~~~~~~~~~~~~~~~~~~~~~aPE~~~~~~~~~~~Di~s~G~~  159 (241)
                         +++  |+||||||+|||++. ++.+||+|||+|+......    ....+||+.|+|||++.+ .++.++|||||||+
T Consensus       147 ---~~~~~IiHRDlKp~NILl~~~~g~vKl~DFGla~~~~~~~----~~~~~GTp~YmAPE~~~~-~y~~~~DiwSlGvi  218 (290)
T 3fpq_A          147 ---TRTPPIIHRDLKCDNIFITGPTGSVKIGDLGLATLKRASF----AKAVIGTPEFMAPEMYEE-KYDESVDVYAFGMC  218 (290)
T ss_dssp             ---TSSSCCCCCCCCGGGEEESSTTSCEEECCTTGGGGCCTTS----BEESCSSCCCCCGGGGGT-CCCTHHHHHHHHHH
T ss_pred             ---HCCCCEEecccChhheeEECCCCCEEEEeCcCCEeCCCCc----cCCcccCccccCHHHcCC-CCCcHHHHHHHHHH
Confidence               777  999999999999984 7899999999997543322    234689999999998874 69999999999999


Q ss_pred             HHHHHhcCcccccccccCCCcccchHHHHHHHhhhcccCCCCCCccccCCCchhHHHHHHHHHHHHHHhccCCCCCCCCC
Q 044022          160 LFELLAGRIHIWDLLKDTHDHGCFFNEYLKNYLEDKRFTGIPAPIIVQDIPCIEKEQQLHASAQLTLECVNNSPEDRPTM  239 (241)
Q Consensus       160 ~~~~~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~cl~~~p~~Rpt~  239 (241)
                      +|+|++|+.||.....        ......... .+    .........        .++.+.+|+.+||+.||++|||+
T Consensus       219 lyelltg~~Pf~~~~~--------~~~~~~~i~-~~----~~~~~~~~~--------~~~~~~~li~~~L~~dP~~R~s~  277 (290)
T 3fpq_A          219 MLEMATSEYPYSECQN--------AAQIYRRVT-SG----VKPASFDKV--------AIPEVKEIIEGCIRQNKDERYSI  277 (290)
T ss_dssp             HHHHHHSSCTTTTCSS--------HHHHHHHHT-TT----CCCGGGGGC--------CCHHHHHHHHHHSCSSGGGSCCH
T ss_pred             HHHHHHCCCCCCCCCc--------HHHHHHHHH-cC----CCCCCCCcc--------CCHHHHHHHHHHccCChhHCcCH
Confidence            9999999999954211        111111111 11    111111111        22568899999999999999998


Q ss_pred             CC
Q 044022          240 VD  241 (241)
Q Consensus       240 ~e  241 (241)
                      +|
T Consensus       278 ~e  279 (290)
T 3fpq_A          278 KD  279 (290)
T ss_dssp             HH
T ss_pred             HH
Confidence            54


No 9  
>4fie_A Serine/threonine-protein kinase PAK 4; kinase domain, protein ATP binding, phosphorylation, transferase; HET: SEP ANP; 3.11A {Homo sapiens}
Probab=100.00  E-value=4.4e-50  Score=334.04  Aligned_cols=214  Identities=16%  Similarity=0.246  Sum_probs=171.2

Q ss_pred             CcccccccccccHHHHHHHHHHHHhcCCCcccceeeeeeeCCcceEEEEecCCCCHHHhhcCCCc---hHHHHHHHHHHH
Q 044022            1 MKFYGHEYHRHTYGSCINNITYAAQMSHNHILKRIGCCLQTPIPILVFQSVEYGTLRDCIFGAPL---PRLKIASDIVNS   77 (241)
Q Consensus         1 iK~~~~~~~~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~~~~~~~lv~e~~~~~sL~~~l~~~~~---~~~~~~~~i~~~   77 (241)
                      ||++... .....+.+.+|+++|++|+|||||+++++|..++.+|+|||||+||+|.+++.....   ....++.||+.|
T Consensus       181 iK~i~~~-~~~~~~~~~~Ei~il~~l~HpnIV~l~~~~~~~~~~~iVmEy~~gG~L~~~i~~~~l~e~~~~~~~~qil~a  259 (423)
T 4fie_A          181 VKKMDLR-KQQRRELLFNEVVIMRDYQHENVVEMYNSYLVGDELWVVMEFLEGGALTDIVTHTRMNEEQIAAVCLAVLQA  259 (423)
T ss_dssp             EEEEEST-TCSSGGGHHHHHHHHHHCCCTTBCCEEEEEEETTEEEEEEECCTTEEHHHHHHHSCCCHHHHHHHHHHHHHH
T ss_pred             EEEEecc-chhHHHHHHHHHHHHHhCCCCCCCceEEEEEECCEEEEEEeCCCCCcHHHHHhccCCCHHHHHHHHHHHHHH
Confidence            4555433 234567799999999999999999999999999999999999999999999876543   567899999999


Q ss_pred             hchhhcCCCCCceeccCCCCCeeecCCCCeEEeeccCceecCCCCcceeecccccCCCccCcccccccCCCcchhhHHHH
Q 044022           78 LAYLHFGFPRPIVLRNFKTQNILFNEENVAKWFDFLLSISIPEGETHITTDRVIGTRGYSAPEYISICVLNEKSNVFSFG  157 (241)
Q Consensus        78 l~~lh~~~~~~ivh~dl~~~nil~~~~~~~~l~df~~~~~~~~~~~~~~~~~~~~~~~~~aPE~~~~~~~~~~~Di~s~G  157 (241)
                      |.|||   +++|+||||||+|||++.++.+||+|||+++.......  .....+||+.|+|||++.+..|+.++||||||
T Consensus       260 L~ylH---~~~IiHRDiKp~NILl~~~g~vKl~DFGla~~~~~~~~--~~~~~~GTp~YmAPEvl~~~~y~~~~DiWSlG  334 (423)
T 4fie_A          260 LSVLH---AQGVIHRDIKSDSILLTHDGRVKLSDFGFCAQVSKEVP--RRKSLVGTPYWMAPELISRLPYGPEVDIWSLG  334 (423)
T ss_dssp             HHHHH---HTTEECCCCSTTTEEECTTCCEEECCCTTCEECCSSCC--CBCCCEECTTTCCHHHHTTCCBCTHHHHHHHH
T ss_pred             HHHHH---HCCeecccCCHHHEEEcCCCCEEEecCccceECCCCCc--cccccccCcCcCCHHHHCCCCCCcHHHHHHHH
Confidence            99999   99999999999999999999999999999987654322  22456899999999999999999999999999


Q ss_pred             HHHHHHHhcCcccccccccCCCcccchHHHHHHHhhhcccCCCCCCccccCCCchhHHHHHHHHHHHHHHhccCCCCCCC
Q 044022          158 AFLFELLAGRIHIWDLLKDTHDHGCFFNEYLKNYLEDKRFTGIPAPIIVQDIPCIEKEQQLHASAQLTLECVNNSPEDRP  237 (241)
Q Consensus       158 ~~~~~~~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~cl~~~p~~Rp  237 (241)
                      |++|||++|+.||...         ...+......... ......   ..        ..++.+.+|+.+||..||++||
T Consensus       335 vilyeml~G~~PF~~~---------~~~~~~~~i~~~~-~~~~~~---~~--------~~s~~~~dli~~~L~~dP~~R~  393 (423)
T 4fie_A          335 IMVIEMVDGEPPYFNE---------PPLKAMKMIRDNL-PPRLKN---LH--------KVSPSLKGFLDRLLVRDPAQRA  393 (423)
T ss_dssp             HHHHHHHHSSCTTTTS---------CHHHHHHHHHHSC-CCCCSC---TT--------SSCHHHHHHHHHHSCSSTTTSC
T ss_pred             HHHHHHHHCCCCCCCc---------CHHHHHHHHHcCC-CCCCcc---cc--------cCCHHHHHHHHHHcCCChhHCc
Confidence            9999999999999541         1222222222211 111110   11        1235789999999999999999


Q ss_pred             CCCC
Q 044022          238 TMVD  241 (241)
Q Consensus       238 t~~e  241 (241)
                      |++|
T Consensus       394 ta~e  397 (423)
T 4fie_A          394 TAAE  397 (423)
T ss_dssp             CHHH
T ss_pred             CHHH
Confidence            9864


No 10 
>4ase_A Vascular endothelial growth factor receptor 2; transferase, angiogenesis, signaling protein, phosphorylatio receptor, inhibitor; HET: AV9; 1.83A {Homo sapiens} PDB: 4agd_A* 4asd_A* 4agc_A*
Probab=100.00  E-value=2.2e-51  Score=336.52  Aligned_cols=215  Identities=20%  Similarity=0.318  Sum_probs=170.8

Q ss_pred             cccccccccccHHHHHHHHHHHHhcCC-CcccceeeeeeeC-CcceEEEEecCCCCHHHhhcCCC---------------
Q 044022            2 KFYGHEYHRHTYGSCINNITYAAQMSH-NHILKRIGCCLQT-PIPILVFQSVEYGTLRDCIFGAP---------------   64 (241)
Q Consensus         2 K~~~~~~~~~~~~~~~~e~~~l~~l~h-~~iv~~~~~~~~~-~~~~lv~e~~~~~sL~~~l~~~~---------------   64 (241)
                      |.+.........++|.+|+++|.+++| ||||+++|+|... +.+++|||||++|+|.++++...               
T Consensus       100 K~l~~~~~~~~~~~~~~E~~il~~l~hhpnIV~l~g~~~~~~~~~~iV~Ey~~~G~L~~~L~~~~~~~~~~~~~~~~~~~  179 (353)
T 4ase_A          100 KMLKEGATHSEHRALMSELKILIHIGHHLNVVNLLGACTKPGGPLMVIVEFCKFGNLSTYLRSKRNEFVPYKVAPEDLYK  179 (353)
T ss_dssp             EEECTTCCHHHHHHHHHHHHHHHHHCCCTTBCCEEEEECCTTSCCEEEEECCTTEEHHHHHHHTGGGBCCC-------CT
T ss_pred             EEEccccChHHHHHHHHHHHHHHHcCCCCcEEEEEEEEEecCCEEEEEEEcCCCCCHHHHHHhcccccccccccchhhcc
Confidence            455444444456789999999999966 8999999999765 56899999999999999996421               


Q ss_pred             -----chHHHHHHHHHHHhchhhcCCCCCceeccCCCCCeeecCCCCeEEeeccCceecCCCCcceeecccccCCCccCc
Q 044022           65 -----LPRLKIASDIVNSLAYLHFGFPRPIVLRNFKTQNILFNEENVAKWFDFLLSISIPEGETHITTDRVIGTRGYSAP  139 (241)
Q Consensus        65 -----~~~~~~~~~i~~~l~~lh~~~~~~ivh~dl~~~nil~~~~~~~~l~df~~~~~~~~~~~~~~~~~~~~~~~~~aP  139 (241)
                           ..++.++.||+.||.|||   +++|+||||||+|||++.++.+||+|||+++...........+...||+.|+||
T Consensus       180 ~~l~~~~~~~~~~qia~gl~yLH---~~~iiHRDLK~~NILl~~~~~vKi~DFGlar~~~~~~~~~~~~~~~gt~~ymAP  256 (353)
T 4ase_A          180 DFLTLEHLICYSFQVAKGMEFLA---SRKCIHRDLAARNILLSEKNVVKICDFGLARDIYKDPDYVRKGDARLPLKWMAP  256 (353)
T ss_dssp             TCBCHHHHHHHHHHHHHHHHHHH---HTTCCCSCCSGGGEEECGGGCEEECCCGGGSCTTTCTTSEEETTEEECGGGCCH
T ss_pred             ccCCHHHHHHHHHHHHHHHHhHh---hCCeecCccCccceeeCCCCCEEECcchhhhhcccCCCceeeccccccccccCH
Confidence                 136789999999999999   899999999999999999999999999999877655544455567799999999


Q ss_pred             ccccccCCCcchhhHHHHHHHHHHHh-cCcccccccccCCCcccchHHHHHHHhhhcccCCCCCCccccCCCchhHHHHH
Q 044022          140 EYISICVLNEKSNVFSFGAFLFELLA-GRIHIWDLLKDTHDHGCFFNEYLKNYLEDKRFTGIPAPIIVQDIPCIEKEQQL  218 (241)
Q Consensus       140 E~~~~~~~~~~~Di~s~G~~~~~~~~-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  218 (241)
                      |++.+..++.++|||||||++|||+| |+.||.....         .+........+.....++             .++
T Consensus       257 E~l~~~~y~~ksDVwS~Gv~l~El~t~G~~Pf~~~~~---------~~~~~~~i~~g~~~~~p~-------------~~~  314 (353)
T 4ase_A          257 ETIFDRVYTIQSDVWSFGVLLWEIFSLGASPYPGVKI---------DEEFCRRLKEGTRMRAPD-------------YTT  314 (353)
T ss_dssp             HHHHHCCCCHHHHHHHHHHHHHHHTTTSCCSSTTCCC---------SHHHHHHHHHTCCCCCCT-------------TCC
T ss_pred             HHHhcCCCCCcccEeehHHHHHHHHhCCCCCCCCCCH---------HHHHHHHHHcCCCCCCCc-------------cCC
Confidence            99999999999999999999999998 8999965211         112222222332222221             123


Q ss_pred             HHHHHHHHHhccCCCCCCCCCCC
Q 044022          219 HASAQLTLECVNNSPEDRPTMVD  241 (241)
Q Consensus       219 ~~~~~l~~~cl~~~p~~Rpt~~e  241 (241)
                      +.+.+++.+||+.||++|||++|
T Consensus       315 ~~~~~li~~c~~~dP~~RPt~~e  337 (353)
T 4ase_A          315 PEMYQTMLDCWHGEPSQRPTFSE  337 (353)
T ss_dssp             HHHHHHHHHHTCSSGGGSCCHHH
T ss_pred             HHHHHHHHHHcCcChhHCcCHHH
Confidence            57889999999999999999853


No 11 
>4g3f_A NF-kappa-beta-inducing kinase; non-RD kinase, protein serine/threonine kinase, S based drug design, MAP3K14, transferase; HET: 0WB; 1.64A {Mus musculus} PDB: 4g3g_A* 4g3c_A 4dn5_A*
Probab=100.00  E-value=5e-50  Score=325.28  Aligned_cols=201  Identities=20%  Similarity=0.255  Sum_probs=158.1

Q ss_pred             HHHHHHHHhcCCCcccceeeeeeeCCcceEEEEecCCCCHHHhhcCCC----chHHHHHHHHHHHhchhhcCCCCCceec
Q 044022           17 INNITYAAQMSHNHILKRIGCCLQTPIPILVFQSVEYGTLRDCIFGAP----LPRLKIASDIVNSLAYLHFGFPRPIVLR   92 (241)
Q Consensus        17 ~~e~~~l~~l~h~~iv~~~~~~~~~~~~~lv~e~~~~~sL~~~l~~~~----~~~~~~~~~i~~~l~~lh~~~~~~ivh~   92 (241)
                      .+|++++++|+|||||++++++.+++.+|+|||||+||+|.++++...    .....++.||+.||.|||   +++|+||
T Consensus        98 ~~E~~il~~l~HpnIV~l~~~~~~~~~~~ivmEy~~gg~L~~~l~~~~~l~e~~~~~~~~qi~~aL~ylH---~~~IiHR  174 (336)
T 4g3f_A           98 VEELVACAGLSSPRIVPLYGAVREGPWVNIFMELLEGGSLGQLIKQMGCLPEDRALYYLGQALEGLEYLH---TRRILHG  174 (336)
T ss_dssp             THHHHTTTTCCCTTBCCEEEEEEETTEEEEEECCCTTCBHHHHHHHHSSCCHHHHHHHHHHHHHHHHHHH---TTTEECS
T ss_pred             HHHHHHHHhCCCCCCCcEEEEEEECCEEEEEEeccCCCcHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHH---HCCceec
Confidence            479999999999999999999999999999999999999999996542    256789999999999999   9999999


Q ss_pred             cCCCCCeeecCCC-CeEEeeccCceecCCCCc---ceeecccccCCCccCcccccccCCCcchhhHHHHHHHHHHHhcCc
Q 044022           93 NFKTQNILFNEEN-VAKWFDFLLSISIPEGET---HITTDRVIGTRGYSAPEYISICVLNEKSNVFSFGAFLFELLAGRI  168 (241)
Q Consensus        93 dl~~~nil~~~~~-~~~l~df~~~~~~~~~~~---~~~~~~~~~~~~~~aPE~~~~~~~~~~~Di~s~G~~~~~~~~g~~  168 (241)
                      ||||+|||++.++ .+||+|||+++.......   .......+||+.|+|||++.+..++.++|||||||++|+|++|+.
T Consensus       175 DlKp~NILl~~~g~~vKl~DFGla~~~~~~~~~~~~~~~~~~~GT~~YmAPE~~~~~~y~~~~DiwSlGvilyemltG~~  254 (336)
T 4g3f_A          175 DVKADNVLLSSDGSRAALCDFGHALCLQPDGLGKSLLTGDYIPGTETHMAPEVVMGKPCDAKVDIWSSCCMMLHMLNGCH  254 (336)
T ss_dssp             CCCGGGEEECTTSCCEEECCCTTCEEC------------CCCCCCGGGCCHHHHTTCCCCTHHHHHHHHHHHHHHHHSSC
T ss_pred             ccCHHHEEEeCCCCEEEEeeCCCCeEccCCCcccceecCCccccCccccCHHHHCCCCCCcHHHHHHHHHHHHHHHHCcC
Confidence            9999999999987 699999999987654321   122344679999999999999999999999999999999999999


Q ss_pred             ccccccccCCCcccchHHHHHHHhhhcccCCCCCCccccCCCchhHHHHHHHHHHHHHHhccCCCCCCCCCCC
Q 044022          169 HIWDLLKDTHDHGCFFNEYLKNYLEDKRFTGIPAPIIVQDIPCIEKEQQLHASAQLTLECVNNSPEDRPTMVD  241 (241)
Q Consensus       169 p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~cl~~~p~~Rpt~~e  241 (241)
                      ||......     .....    ......    +...+.+.        .++.+.+++.+||+.||++|||++|
T Consensus       255 Pf~~~~~~-----~~~~~----i~~~~~----~~~~~~~~--------~s~~~~~li~~~L~~dP~~R~sa~e  306 (336)
T 4g3f_A          255 PWTQYFRG-----PLCLK----IASEPP----PIREIPPS--------CAPLTAQAIQEGLRKEPVHRASAME  306 (336)
T ss_dssp             SSTTTCCS-----CCHHH----HHHSCC----GGGGSCTT--------SCHHHHHHHHHHTCSSGGGSCCHHH
T ss_pred             CCCCCCHH-----HHHHH----HHcCCC----CchhcCcc--------CCHHHHHHHHHHccCCHhHCcCHHH
Confidence            99652211     11111    111110    00111122        2367889999999999999999853


No 12 
>3hyh_A Carbon catabolite-derepressing protein kinase; kinase domain, transferase, ATP-binding, carbohydrate metabo kinase, membrane; 2.20A {Saccharomyces cerevisiae} PDB: 3dae_A 2fh9_A 3mn3_A
Probab=100.00  E-value=3.3e-49  Score=312.78  Aligned_cols=210  Identities=23%  Similarity=0.305  Sum_probs=157.0

Q ss_pred             Cccccccc--ccccHHHHHHHHHHHHhcCCCcccceeeeeeeCCcceEEEEecCCCCHHHhhcCCCc----hHHHHHHHH
Q 044022            1 MKFYGHEY--HRHTYGSCINNITYAAQMSHNHILKRIGCCLQTPIPILVFQSVEYGTLRDCIFGAPL----PRLKIASDI   74 (241)
Q Consensus         1 iK~~~~~~--~~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~~~~~~~lv~e~~~~~sL~~~l~~~~~----~~~~~~~~i   74 (241)
                      ||++.+..  ......++.+|++++++++|||||++++++..++..|+||||+ +|+|.+++.....    ....++.||
T Consensus        43 iK~i~~~~~~~~~~~~~~~~Ei~il~~l~HpnIv~~~~~~~~~~~~~ivmEy~-~g~L~~~l~~~~~l~e~~~~~~~~qi  121 (275)
T 3hyh_A           43 LKIINKKVLAKSDMQGRIEREISYLRLLRHPHIIKLYDVIKSKDEIIMVIEYA-GNELFDYIVQRDKMSEQEARRFFQQI  121 (275)
T ss_dssp             EEEEECC------CHHHHHHHHHHHHHCCCTTBCCEEEEEECSSEEEEEEECC-CEEHHHHHHHSCSCCHHHHHHHHHHH
T ss_pred             EEEEeHHHcCCHHHHHHHHHHHHHHHHCCCCCCCeEEEEEEECCEEEEEEeCC-CCCHHHHHHHcCCCCHHHHHHHHHHH
Confidence            45555332  2245678999999999999999999999999999999999999 6899998865422    567899999


Q ss_pred             HHHhchhhcCCCCCceeccCCCCCeeecCCCCeEEeeccCceecCCCCcceeecccccCCCccCcccccccCC-Ccchhh
Q 044022           75 VNSLAYLHFGFPRPIVLRNFKTQNILFNEENVAKWFDFLLSISIPEGETHITTDRVIGTRGYSAPEYISICVL-NEKSNV  153 (241)
Q Consensus        75 ~~~l~~lh~~~~~~ivh~dl~~~nil~~~~~~~~l~df~~~~~~~~~~~~~~~~~~~~~~~~~aPE~~~~~~~-~~~~Di  153 (241)
                      +.||.|||   +++|+||||||+|||++.++.+||+|||+++.......   ..+..||+.|+|||++.+..+ +.++||
T Consensus       122 ~~al~ylH---~~~IiHRDiKP~NILl~~~~~vkl~DFGla~~~~~~~~---~~~~~GT~~Y~APE~~~~~~y~~~~~Di  195 (275)
T 3hyh_A          122 ISAVEYCH---RHKIVHRDLKPENLLLDEHLNVKIADFGLSNIMTDGNF---LKTSCGSPNYAAPEVISGKLYAGPEVDV  195 (275)
T ss_dssp             HHHHHHHH---HTTCCCCCCCTTTEEECTTCCEEECCSSCC------------------CTTSCHHHHSSSSCCCTHHHH
T ss_pred             HHHHHHHH---HCCcccccCChHHeEECCCCCEEEeecCCCeecCCCCc---cCCeeECcccCChhhhcCCCCCCChhhh
Confidence            99999999   99999999999999999999999999999976544322   234579999999999998776 579999


Q ss_pred             HHHHHHHHHHHhcCcccccccccCCCcccchHHHHHHHhhhcccCCCCCCccccCCCchhHHHHHHHHHHHHHHhccCCC
Q 044022          154 FSFGAFLFELLAGRIHIWDLLKDTHDHGCFFNEYLKNYLEDKRFTGIPAPIIVQDIPCIEKEQQLHASAQLTLECVNNSP  233 (241)
Q Consensus       154 ~s~G~~~~~~~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~cl~~~p  233 (241)
                      ||+||++|+|++|+.||...         ...+....... +.. .     +...        .++.+.+|+.+||+.||
T Consensus       196 wSlGvily~lltg~~PF~~~---------~~~~~~~~i~~-~~~-~-----~p~~--------~s~~~~~li~~~L~~dP  251 (275)
T 3hyh_A          196 WSCGVILYVMLCRRLPFDDE---------SIPVLFKNISN-GVY-T-----LPKF--------LSPGAAGLIKRMLIVNP  251 (275)
T ss_dssp             HHHHHHHHHHHHSSCSSCCS---------SHHHHHHHHHH-TCC-C-----CCTT--------SCHHHHHHHHHHSCSSG
T ss_pred             HHHHHHHHHHHHCCCCCCCC---------CHHHHHHHHHc-CCC-C-----CCCC--------CCHHHHHHHHHHccCCh
Confidence            99999999999999999541         12222222222 111 1     1111        22578899999999999


Q ss_pred             CCCCCCCC
Q 044022          234 EDRPTMVD  241 (241)
Q Consensus       234 ~~Rpt~~e  241 (241)
                      ++|||++|
T Consensus       252 ~~R~s~~e  259 (275)
T 3hyh_A          252 LNRISIHE  259 (275)
T ss_dssp             GGSCCHHH
T ss_pred             hHCcCHHH
Confidence            99999864


No 13 
>3ubd_A Ribosomal protein S6 kinase alpha-3; kinase-inhibitor complex, induced FIT, transferase-transfera inhibitor complex; HET: SL0; 1.53A {Mus musculus} PDB: 4el9_A* 3g51_A* 2z7q_A* 2z7r_A* 2z7s_A*
Probab=100.00  E-value=3.8e-50  Score=322.20  Aligned_cols=200  Identities=22%  Similarity=0.225  Sum_probs=156.8

Q ss_pred             cHHHHHHHHHHHHhcCCCcccceeeeeeeCCcceEEEEecCCCCHHHhhcCCCc----hHHHHHHHHHHHhchhhcCCCC
Q 044022           12 TYGSCINNITYAAQMSHNHILKRIGCCLQTPIPILVFQSVEYGTLRDCIFGAPL----PRLKIASDIVNSLAYLHFGFPR   87 (241)
Q Consensus        12 ~~~~~~~e~~~l~~l~h~~iv~~~~~~~~~~~~~lv~e~~~~~sL~~~l~~~~~----~~~~~~~~i~~~l~~lh~~~~~   87 (241)
                      ...++.+|+++|++++|||||++++++..++.+|+|||||+||+|.+++.....    ....++.||+.||.|||   ++
T Consensus        69 ~~~~~~~E~~il~~l~HpnIv~l~~~~~~~~~~~ivmEy~~gg~L~~~l~~~~~l~e~~~~~~~~qi~~aL~ylH---~~  145 (304)
T 3ubd_A           69 DRVRTKMERDILVEVNHPFIVKLHYAFQTEGKLYLILDFLRGGDLFTRLSKEVMFTEEDVKFYLAELALALDHLH---SL  145 (304)
T ss_dssp             ECC------CCCCCCCCTTEECEEEEEEETTEEEEEECCCTTCEEHHHHHHHCCCCHHHHHHHHHHHHHHHHHHH---HT
T ss_pred             HHHHHHHHHHHHHHCCCCCCCeEEEEEEECCEEEEEEEcCCCCCHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHH---HC
Confidence            445788999999999999999999999999999999999999999999865422    46789999999999999   99


Q ss_pred             CceeccCCCCCeeecCCCCeEEeeccCceecCCCCcceeecccccCCCccCcccccccCCCcchhhHHHHHHHHHHHhcC
Q 044022           88 PIVLRNFKTQNILFNEENVAKWFDFLLSISIPEGETHITTDRVIGTRGYSAPEYISICVLNEKSNVFSFGAFLFELLAGR  167 (241)
Q Consensus        88 ~ivh~dl~~~nil~~~~~~~~l~df~~~~~~~~~~~~~~~~~~~~~~~~~aPE~~~~~~~~~~~Di~s~G~~~~~~~~g~  167 (241)
                      +|+||||||+|||++.++.+||+|||+++.......  ...+.+||+.|+|||++.+..++.++||||+||++|+|++|+
T Consensus       146 ~IiHRDlKp~NILl~~~g~vKl~DFGla~~~~~~~~--~~~~~~GT~~YmAPE~~~~~~y~~~~DiwSlGvilyemltG~  223 (304)
T 3ubd_A          146 GIIYRDLKPENILLDEEGHIKLTDFGLSKESIDHEK--KAYSFCGTVEYMAPEVVNRRGHTQSADWWSFGVLMFEMLTGT  223 (304)
T ss_dssp             TCCCSSCCGGGEEECTTSCEEEESSEEEEC-----C--CCCSCCCCGGGCCHHHHHTSCCCTHHHHHHHHHHHHHHHHSS
T ss_pred             CCcCCCCCHHHeEEcCCCCEEecccccceeccCCCc--cccccccCcccCCHHHhccCCCCCCCcccchHHHHHHHHhCC
Confidence            999999999999999999999999999986543322  223467999999999999999999999999999999999999


Q ss_pred             cccccccccCCCcccchHHHHHHHhhhcccCCCCCCccccCCCchhHHHHHHHHHHHHHHhccCCCCCCCCCC
Q 044022          168 IHIWDLLKDTHDHGCFFNEYLKNYLEDKRFTGIPAPIIVQDIPCIEKEQQLHASAQLTLECVNNSPEDRPTMV  240 (241)
Q Consensus       168 ~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~cl~~~p~~Rpt~~  240 (241)
                      .||...         ...+......... . ..     ...        .++++.+|+.+||+.||++|||+.
T Consensus       224 ~PF~~~---------~~~~~~~~i~~~~-~-~~-----p~~--------~s~~~~~li~~~L~~dP~~R~ta~  272 (304)
T 3ubd_A          224 LPFQGK---------DRKETMTMILKAK-L-GM-----PQF--------LSPEAQSLLRMLFKRNPANRLGAG  272 (304)
T ss_dssp             CSSCCS---------SHHHHHHHHHHCC-C-CC-----CTT--------SCHHHHHHHHHHTCSSGGGSTTCS
T ss_pred             CCCCCc---------CHHHHHHHHHcCC-C-CC-----CCc--------CCHHHHHHHHHHcccCHHHCCCCC
Confidence            999541         1222233222211 1 11     111        225788999999999999999973


No 14 
>3hmm_A TGF-beta receptor type-1; ALK5, kinase, inhibitor, quinazoline, aortic aneurysm, ATP-binding, craniosynostosis, disease mutation, disulfide bond; HET: 855; 1.70A {Homo sapiens} PDB: 1vjy_A* 3gxl_A* 3tzm_A* 2wot_A* 2wou_A* 1py5_A* 1rw8_A*
Probab=100.00  E-value=1.3e-48  Score=315.01  Aligned_cols=218  Identities=20%  Similarity=0.204  Sum_probs=154.6

Q ss_pred             HHHHHHHHhcCCCcccceeeeeeeCC----cceEEEEecCCCCHHHhhcCCCc---hHHHHHHHHHHHhchhhcC-----
Q 044022           17 INNITYAAQMSHNHILKRIGCCLQTP----IPILVFQSVEYGTLRDCIFGAPL---PRLKIASDIVNSLAYLHFG-----   84 (241)
Q Consensus        17 ~~e~~~l~~l~h~~iv~~~~~~~~~~----~~~lv~e~~~~~sL~~~l~~~~~---~~~~~~~~i~~~l~~lh~~-----   84 (241)
                      ..|+..+.+++|||||+++++|...+    .+++|||||++|+|.++++....   .+++++.+++.||+|||+.     
T Consensus        45 e~Ei~~~~~l~HpNIv~l~g~~~~~~~~~~~~~lV~Ey~~~gsL~~~l~~~~l~~~~~~~i~~~ia~gl~ylH~~~~~~~  124 (303)
T 3hmm_A           45 EAEIYQTVMLRHENILGFIAADNKDNGTWTQLWLVSDYHEHGSLFDYLNRYTVTVEGMIKLALSTASGLAHLHMEIVGTQ  124 (303)
T ss_dssp             HHHHHTSTTCCCTTBCCEEEEEEEECSSSEEEEEEEECCTTCBHHHHHHHCCBCHHHHHHHHHHHHHHHHHHHCCBCSTT
T ss_pred             HHHHHHHhcCCCCCCCcEEEEEEecCCCceEEEEEecCCCCCcHHHHHHhCCCCHHHHHHHHHHHHHHHHHHHHhhhhcc
Confidence            34566667889999999999998654    57999999999999999987654   5788999999999999931     


Q ss_pred             CCCCceeccCCCCCeeecCCCCeEEeeccCceecCCCCcc--eeecccccCCCccCccccccc------CCCcchhhHHH
Q 044022           85 FPRPIVLRNFKTQNILFNEENVAKWFDFLLSISIPEGETH--ITTDRVIGTRGYSAPEYISIC------VLNEKSNVFSF  156 (241)
Q Consensus        85 ~~~~ivh~dl~~~nil~~~~~~~~l~df~~~~~~~~~~~~--~~~~~~~~~~~~~aPE~~~~~------~~~~~~Di~s~  156 (241)
                      ...+|+||||||+|||++.++++||+|||+++........  .......||+.|+|||++.+.      .++.++|||||
T Consensus       125 ~~~~IiHRDlKp~NILl~~~~~~Ki~DFGla~~~~~~~~~~~~~~~~~~GT~~ymAPE~l~~~~~~~~~~~~~k~DVwS~  204 (303)
T 3hmm_A          125 GKPAIAHRDLKSKNILVKKNGTCCIADLGLAVRHDSATDTIDIAPNHRVGTKRYMAPEVLDDSINMKHFESFKRADIYAM  204 (303)
T ss_dssp             CBCCEECSCCCGGGEEECTTSCEEECCCTTCEEEETTTTEESCC-----CCGGGCCHHHHTTCSCTTCHHHHHHHHHHHH
T ss_pred             CCCCEeeccCCcccEEECCCCCEEEEeCCCCccccCCCCceeeecccccccccccCHHHhcccccccCCccChhHhhhhH
Confidence            1238999999999999999999999999999866443322  122345799999999998754      36789999999


Q ss_pred             HHHHHHHHhcCcccccccccCC-----CcccchHHHHHHHhhhcccCCCCCCccccCCCchhHHHHHHHHHHHHHHhccC
Q 044022          157 GAFLFELLAGRIHIWDLLKDTH-----DHGCFFNEYLKNYLEDKRFTGIPAPIIVQDIPCIEKEQQLHASAQLTLECVNN  231 (241)
Q Consensus       157 G~~~~~~~~g~~p~~~~~~~~~-----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~cl~~  231 (241)
                      ||++|||+||.+||........     .......+...........    .+.++..   .........+.+|+.+||+.
T Consensus       205 Gvvl~El~tg~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~----rp~~p~~---~~~~~~~~~l~~li~~cl~~  277 (303)
T 3hmm_A          205 GLVFWEIARRCSIGGIHEDYQLPYYDLVPSDPSVEEMRKVVCEQKL----RPNIPNR---WQSCEALRVMAKIMRECWYA  277 (303)
T ss_dssp             HHHHHHHHHTBCBTTBCCCCCCTTTTTSCSSCCHHHHHHHHTTSCC----CCCCCGG---GGSSHHHHHHHHHHHTTCCS
T ss_pred             HHHHHHHHHCCCCCCccccccccchhcccccchHHHHHHHHhcccC----CCCCCcc---ccchHHHHHHHHHHHHHccc
Confidence            9999999999888754221110     0011111122222111111    1111111   11124557789999999999


Q ss_pred             CCCCCCCCCC
Q 044022          232 SPEDRPTMVD  241 (241)
Q Consensus       232 ~p~~Rpt~~e  241 (241)
                      ||++|||+.|
T Consensus       278 dP~~RPt~~e  287 (303)
T 3hmm_A          278 NGAARLTALR  287 (303)
T ss_dssp             SGGGSCCHHH
T ss_pred             CHhHCcCHHH
Confidence            9999999853


No 15 
>4g31_A Eukaryotic translation initiation factor 2-alpha; deletion mutant, catalytic domain, synthetic inhibitor, TRAN transferase inhibitor complex; HET: 0WH; 2.28A {Homo sapiens} PDB: 4g34_A*
Probab=100.00  E-value=1.5e-48  Score=313.58  Aligned_cols=213  Identities=22%  Similarity=0.318  Sum_probs=155.6

Q ss_pred             CcccccccccccHHHHHHHHHHHHhcCCCcccceeeeeeeCC------------cceEEEEecCCCCHHHhhcCCCc---
Q 044022            1 MKFYGHEYHRHTYGSCINNITYAAQMSHNHILKRIGCCLQTP------------IPILVFQSVEYGTLRDCIFGAPL---   65 (241)
Q Consensus         1 iK~~~~~~~~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~~~~------------~~~lv~e~~~~~sL~~~l~~~~~---   65 (241)
                      ||...........+++.+|+++|++|+|||||+++++|...+            ..|+|||||++|+|.+++.....   
T Consensus        35 iK~i~~~~~~~~~~~~~~E~~il~~l~HpnIV~~~~~~~~~~~~~~~~~~~~~~~l~ivmE~~~gg~L~~~l~~~~~~~~  114 (299)
T 4g31_A           35 IKRIRLPNRELAREKVMREVKALAKLEHPGIVRYFNAWLEKNTTEKLQPSSPKVYLYIQMQLCRKENLKDWMNGRCTIEE  114 (299)
T ss_dssp             EEEEEECSSHHHHHHHHHHHHHHTTCCCTTBCCEEEEEEEEC----------CEEEEEEEECCCSCCHHHHHHTCCSGGG
T ss_pred             EEEEeccCCHHHHHHHHHHHHHHHhCCCCCCCeEEEEEEecCccccccccCCCcEEEEEEecCCCCcHHHHHHhcCCCCh
Confidence            455544344445678999999999999999999999997644            36899999999999999976532   


Q ss_pred             ----hHHHHHHHHHHHhchhhcCCCCCceeccCCCCCeeecCCCCeEEeeccCceecCCCCcc----------eeecccc
Q 044022           66 ----PRLKIASDIVNSLAYLHFGFPRPIVLRNFKTQNILFNEENVAKWFDFLLSISIPEGETH----------ITTDRVI  131 (241)
Q Consensus        66 ----~~~~~~~~i~~~l~~lh~~~~~~ivh~dl~~~nil~~~~~~~~l~df~~~~~~~~~~~~----------~~~~~~~  131 (241)
                          ....++.||+.||.|||   +++|+||||||+|||++.++.+||+|||+++........          ......+
T Consensus       115 ~~~~~~~~i~~qi~~al~ylH---~~~IiHRDlKp~NILl~~~~~vKl~DFGla~~~~~~~~~~~~~~~~~~~~~~~~~~  191 (299)
T 4g31_A          115 RERSVCLHIFLQIAEAVEFLH---SKGLMHRDLKPSNIFFTMDDVVKVGDFGLVTAMDQDEEEQTVLTPMPAYARHTGQV  191 (299)
T ss_dssp             SCHHHHHHHHHHHHHHHHHHH---HTTCCCCCCCGGGEEECTTCCEEECCCCCC--------------------------
T ss_pred             hHHHHHHHHHHHHHHHHHHHH---HCcCccccCcHHHeEECCCCcEEEccCccceecCCCccccccccccccccccCCcc
Confidence                25679999999999999   899999999999999999999999999999866443211          1123457


Q ss_pred             cCCCccCcccccccCCCcchhhHHHHHHHHHHHhcCcccccccccCCCcccchHHHHHHHhhhcccCCCCCCccccCCCc
Q 044022          132 GTRGYSAPEYISICVLNEKSNVFSFGAFLFELLAGRIHIWDLLKDTHDHGCFFNEYLKNYLEDKRFTGIPAPIIVQDIPC  211 (241)
Q Consensus       132 ~~~~~~aPE~~~~~~~~~~~Di~s~G~~~~~~~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  211 (241)
                      ||+.|+|||++.+..++.++|||||||++|||++   ||....        ......... ....            .+ 
T Consensus       192 GT~~YmAPE~~~~~~y~~~~DiwSlGvilyell~---Pf~~~~--------~~~~~~~~~-~~~~------------~p-  246 (299)
T 4g31_A          192 GTKLYMSPEQIHGNSYSHKVDIFSLGLILFELLY---PFSTQM--------ERVRTLTDV-RNLK------------FP-  246 (299)
T ss_dssp             CCCTTSCHHHHTTCCCCTHHHHHHHHHHHHHHHS---CCSSHH--------HHHHHHHHH-HTTC------------CC-
T ss_pred             cCccccCHHHHcCCCCCCHHHHHHHHHHHHHHcc---CCCCcc--------HHHHHHHHH-hcCC------------CC-
Confidence            9999999999999999999999999999999996   764310        000111111 1110            11 


Q ss_pred             hhHHHHHHHHHHHHHHhccCCCCCCCCCCC
Q 044022          212 IEKEQQLHASAQLTLECVNNSPEDRPTMVD  241 (241)
Q Consensus       212 ~~~~~~~~~~~~l~~~cl~~~p~~Rpt~~e  241 (241)
                      ......++...+|+.+||+.||++|||++|
T Consensus       247 ~~~~~~~~~~~~li~~~L~~dP~~Rps~~e  276 (299)
T 4g31_A          247 PLFTQKYPCEYVMVQDMLSPSPMERPEAIN  276 (299)
T ss_dssp             HHHHHHCHHHHHHHHHHTCSSGGGSCCHHH
T ss_pred             CCCcccCHHHHHHHHHHcCCChhHCcCHHH
Confidence            111233456788999999999999999853


No 16 
>4b99_A Mitogen-activated protein kinase 7; transferase, inhibitor; HET: R4L; 2.80A {Homo sapiens}
Probab=100.00  E-value=4.4e-45  Score=303.88  Aligned_cols=168  Identities=19%  Similarity=0.254  Sum_probs=137.5

Q ss_pred             Ccccccccc-cccHHHHHHHHHHHHhcCCCcccceeeeeeeC------CcceEEEEecCCCCHHHhhcCCCc----hHHH
Q 044022            1 MKFYGHEYH-RHTYGSCINNITYAAQMSHNHILKRIGCCLQT------PIPILVFQSVEYGTLRDCIFGAPL----PRLK   69 (241)
Q Consensus         1 iK~~~~~~~-~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~~~------~~~~lv~e~~~~~sL~~~l~~~~~----~~~~   69 (241)
                      ||++..... ....+++.+|+++|++|+|||||++++++...      +..|+|||||. |+|.+++.....    ....
T Consensus        84 iK~i~~~~~~~~~~~~~~~Ei~il~~l~HpnIv~l~~~~~~~~~~~~~~~~~ivmE~~~-g~L~~~i~~~~~l~~~~~~~  162 (398)
T 4b99_A           84 IKKIPNAFDVVTNAKRTLRELKILKHFKHDNIIAIKDILRPTVPYGEFKSVYVVLDLME-SDLHQIIHSSQPLTLEHVRY  162 (398)
T ss_dssp             EEEETTTTSSHHHHHHHHHHHHHHHHCCCTTBCCEEEECCCSSCTTTCCCEEEEEECCS-EEHHHHHTSSSCCCHHHHHH
T ss_pred             EEEECccccchHHHHHHHHHHHHHHhcCCCCcceEeeeeecccccccCCEEEEEEeCCC-CCHHHHHHhcCCCCHHHHHH
Confidence            455543332 23456789999999999999999999987643      57899999996 689999876532    4678


Q ss_pred             HHHHHHHHhchhhcCCCCCceeccCCCCCeeecCCCCeEEeeccCceecCCCC--cceeecccccCCCccCccccccc-C
Q 044022           70 IASDIVNSLAYLHFGFPRPIVLRNFKTQNILFNEENVAKWFDFLLSISIPEGE--THITTDRVIGTRGYSAPEYISIC-V  146 (241)
Q Consensus        70 ~~~~i~~~l~~lh~~~~~~ivh~dl~~~nil~~~~~~~~l~df~~~~~~~~~~--~~~~~~~~~~~~~~~aPE~~~~~-~  146 (241)
                      ++.||+.||.|||   +++|+||||||+|||++.++.+||+|||+++......  ........+||+.|+|||++.+. .
T Consensus       163 ~~~qil~al~ylH---~~~iiHRDlKP~NIl~~~~~~~Ki~DFGla~~~~~~~~~~~~~~~~~~GT~~Y~APEv~~~~~~  239 (398)
T 4b99_A          163 FLYQLLRGLKYMH---SAQVIHRDLKPSNLLVNENCELKIGDFGMARGLCTSPAEHQYFMTEYVATRWYRAPELMLSLHE  239 (398)
T ss_dssp             HHHHHHHHHHHHH---HTTCBCCCCCGGGEEECTTCCEEECCCTTCBCC-------CCCCCSSCCCCTTCCHHHHTTCSC
T ss_pred             HHHHHHHHHHHHH---HCcCcCCCcCccccccCCCCCEEEeecceeeecccCccccccccccceeChHhcCHHHhcCCCC
Confidence            9999999999999   9999999999999999999999999999998654321  11223456899999999998875 5


Q ss_pred             CCcchhhHHHHHHHHHHHhcCccccc
Q 044022          147 LNEKSNVFSFGAFLFELLAGRIHIWD  172 (241)
Q Consensus       147 ~~~~~Di~s~G~~~~~~~~g~~p~~~  172 (241)
                      ++.++||||+||++|+|++|++||..
T Consensus       240 ~~~~~DiWSlG~il~ell~G~~pF~g  265 (398)
T 4b99_A          240 YTQAIDLWSVGCIFGEMLARRQLFPG  265 (398)
T ss_dssp             CCTHHHHHHHHHHHHHHHHTSCSSCC
T ss_pred             CCChhheehhHHHHHHHHHCCCCCCC
Confidence            68999999999999999999999954


No 17 
>4f9c_A Cell division cycle 7-related protein kinase; Ser/Thr protein kinase, transferase, phosphorylation, cell C cell division, mitosis, S phase; HET: 0SX; 2.08A {Homo sapiens} PDB: 4f99_A* 4f9b_A* 4f9a_A*
Probab=100.00  E-value=3.7e-45  Score=301.18  Aligned_cols=158  Identities=18%  Similarity=0.291  Sum_probs=135.3

Q ss_pred             cHHHHHHHHHHHHhc-CCCcccceeeeeeeCCcceEEEEecCCCCHHHhhcCCCc-hHHHHHHHHHHHhchhhcCCCCCc
Q 044022           12 TYGSCINNITYAAQM-SHNHILKRIGCCLQTPIPILVFQSVEYGTLRDCIFGAPL-PRLKIASDIVNSLAYLHFGFPRPI   89 (241)
Q Consensus        12 ~~~~~~~e~~~l~~l-~h~~iv~~~~~~~~~~~~~lv~e~~~~~sL~~~l~~~~~-~~~~~~~~i~~~l~~lh~~~~~~i   89 (241)
                      ...++.+|+++|+.+ .|||||+++++|...++.|+||||+++|+|.++++..+. ....++.|++.||.|||   +++|
T Consensus        62 ~~~~~~~E~~~l~~~~~h~nIv~l~~~~~~~~~~~lvmE~~~g~~L~~~~~~l~~~~~~~~~~qll~al~ylH---~~gI  138 (361)
T 4f9c_A           62 HPIRIAAELQCLTVAGGQDNVMGVKYCFRKNDHVVIAMPYLEHESFLDILNSLSFQEVREYMLNLFKALKRIH---QFGI  138 (361)
T ss_dssp             CHHHHHHHHHHHHHTCSBTTBCCCSEEEEETTEEEEEEECCCCCCHHHHHTTCCHHHHHHHHHHHHHHHHHHH---HTTE
T ss_pred             CHHHHHHHHHHHHHhcCCCCCceEEEEEEECCEEEEEEeCCCcccHHHHHcCCCHHHHHHHHHHHHHHHHHHH---HCCe
Confidence            456788999999998 699999999999999999999999999999999976544 46789999999999999   9999


Q ss_pred             eeccCCCCCeeecCC-CCeEEeeccCceecCCCCcc--------------------------eeecccccCCCccCcccc
Q 044022           90 VLRNFKTQNILFNEE-NVAKWFDFLLSISIPEGETH--------------------------ITTDRVIGTRGYSAPEYI  142 (241)
Q Consensus        90 vh~dl~~~nil~~~~-~~~~l~df~~~~~~~~~~~~--------------------------~~~~~~~~~~~~~aPE~~  142 (241)
                      +||||||+|||++.+ +.+||+|||+++........                          ......+||+.|+|||++
T Consensus       139 iHRDiKPeNiLl~~~~~~~kl~DFGla~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l  218 (361)
T 4f9c_A          139 VHRDVKPSNFLYNRRLKKYALVDFGLAQGTHDTKIELLKFVQSEAQQERCSQNKCSICLSRRQQVAPRAGTPGFRAPEVL  218 (361)
T ss_dssp             ECSCCSGGGEEEETTTTEEEECCCTTCEECTTCSCGGGGGC--------------------------CCCCGGGCCHHHH
T ss_pred             EeCcCCHHHeEEeCCCCeEEECcCCCCcccCCccccccccccccccccccccccccccccccccccccccCccccCHHHH
Confidence            999999999999877 79999999999765432110                          112345799999999999


Q ss_pred             ccc-CCCcchhhHHHHHHHHHHHhcCccccc
Q 044022          143 SIC-VLNEKSNVFSFGAFLFELLAGRIHIWD  172 (241)
Q Consensus       143 ~~~-~~~~~~Di~s~G~~~~~~~~g~~p~~~  172 (241)
                      .+. .++.++||||+||++|+|++|+.||..
T Consensus       219 ~~~~~y~~~~DiWSlG~il~ell~G~~Pf~~  249 (361)
T 4f9c_A          219 TKCPNQTTAIDMWSAGVIFLSLLSGRYPFYK  249 (361)
T ss_dssp             TTCSCCCTHHHHHHHHHHHHHHHHTCSSSSC
T ss_pred             cCCCCCCCccchhhhHHHHHHHHHCCCCCCC
Confidence            876 488999999999999999999999965


No 18 
>3uto_A Twitchin; kinase, muscle sarcomere, transferase; HET: FLC P33; 2.40A {Caenorhabditis elegans} PDB: 1koa_A
Probab=100.00  E-value=4.5e-44  Score=310.80  Aligned_cols=204  Identities=16%  Similarity=0.206  Sum_probs=164.2

Q ss_pred             cHHHHHHHHHHHHhcCCCcccceeeeeeeCCcceEEEEecCCCCHHHhhcCCC--c---hHHHHHHHHHHHhchhhcCCC
Q 044022           12 TYGSCINNITYAAQMSHNHILKRIGCCLQTPIPILVFQSVEYGTLRDCIFGAP--L---PRLKIASDIVNSLAYLHFGFP   86 (241)
Q Consensus        12 ~~~~~~~e~~~l~~l~h~~iv~~~~~~~~~~~~~lv~e~~~~~sL~~~l~~~~--~---~~~~~~~~i~~~l~~lh~~~~   86 (241)
                      ..+.+.+|+++|++|+|||||+++++|...+.+++|||||+||+|.+++....  .   ....++.||+.||.|||   +
T Consensus       197 ~~~~~~~Ei~il~~l~hpnIv~l~~~~~~~~~~~iv~E~~~gg~L~~~i~~~~~~l~e~~~~~~~~qi~~al~ylH---~  273 (573)
T 3uto_A          197 DKETVRKEIQTMSVLRHPTLVNLHDAFEDDNEMVMIYEFMSGGELFEKVADEHNKMSEDEAVEYMRQVCKGLCHMH---E  273 (573)
T ss_dssp             HHHHHHHHHHHHHHTCCTTBCCEEEEEECSSEEEEEEECCCCCBHHHHHTCTTSCEEHHHHHHHHHHHHHHHHHHH---H
T ss_pred             hHHHHHHHHHHHHhCCCCCCCeEEEEEEECCEEEEEEeecCCCcHHHHHHHhCCCCCHHHHHHHHHHHHHHHHHHH---H
Confidence            45678899999999999999999999999999999999999999999986432  2   46789999999999999   9


Q ss_pred             CCceeccCCCCCeeecCC--CCeEEeeccCceecCCCCcceeecccccCCCccCcccccccCCCcchhhHHHHHHHHHHH
Q 044022           87 RPIVLRNFKTQNILFNEE--NVAKWFDFLLSISIPEGETHITTDRVIGTRGYSAPEYISICVLNEKSNVFSFGAFLFELL  164 (241)
Q Consensus        87 ~~ivh~dl~~~nil~~~~--~~~~l~df~~~~~~~~~~~~~~~~~~~~~~~~~aPE~~~~~~~~~~~Di~s~G~~~~~~~  164 (241)
                      ++|+||||||+|||++.+  +.+||+|||+++........   ...+||+.|+|||++.+..++.++||||+||++|+|+
T Consensus       274 ~~iiHRDlKp~Nill~~~~~~~vKl~DFG~a~~~~~~~~~---~~~~GT~~y~APEv~~~~~y~~~~DiWSlGvilyeml  350 (573)
T 3uto_A          274 NNYVHLDLKPENIMFTTKRSNELKLIDFGLTAHLDPKQSV---KVTTGTAEFAAPEVAEGKPVGYYTDMWSVGVLSYILL  350 (573)
T ss_dssp             TTEECCCCCGGGEEESSSSCCCEEECCCSSCEECCTTSEE---EEECSSGGGCCHHHHTTCCBCHHHHHHHHHHHHHHHH
T ss_pred             CCeeeccCChhhccccCCCCCCEEEeeccceeEccCCCce---eeeEECccccCHHHhCCCCCCcHHHHHHHHHHHHHHH
Confidence            999999999999999854  89999999999887654322   3357999999999999999999999999999999999


Q ss_pred             hcCcccccccccCCCcccchHHHHHHHhhhcccCCCCCCccccCCCchhHHHHHHHHHHHHHHhccCCCCCCCCCCC
Q 044022          165 AGRIHIWDLLKDTHDHGCFFNEYLKNYLEDKRFTGIPAPIIVQDIPCIEKEQQLHASAQLTLECVNNSPEDRPTMVD  241 (241)
Q Consensus       165 ~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~cl~~~p~~Rpt~~e  241 (241)
                      +|..||...         ...+......... . . .......        ..++.+.+|+.+||..||++|||++|
T Consensus       351 ~G~~Pf~~~---------~~~~~~~~i~~~~-~-~-~~~~~~~--------~~s~~~~dli~~~L~~dp~~R~t~~e  407 (573)
T 3uto_A          351 SGLSPFGGE---------NDDETLRNVKSCD-W-N-MDDSAFS--------GISEDGKDFIRKLLLADPNTRMTIHQ  407 (573)
T ss_dssp             HSCCSSCCS---------SHHHHHHHHHTTC-C-C-CCSGGGT--------TSCHHHHHHHHTTSCSSGGGSCCHHH
T ss_pred             HCCCCCCCc---------CHHHHHHHHHhCC-C-C-CCccccc--------CCCHHHHHHHHHHccCChhHCcCHHH
Confidence            999999642         1222222222111 1 0 1111111        22357889999999999999999753


No 19 
>3v5w_A G-protein coupled receptor kinase 2; inhibitor complex, protein kinase, beta propeller, RGS homol domain; HET: 8PR; 2.07A {Homo sapiens} PDB: 3cik_A* 3krw_A* 3krx_A* 1omw_A 1ym7_A 2bcj_A* 3uzs_A 3uzt_A 3pvu_A* 3psc_A* 3pvw_A* 1bak_A
Probab=100.00  E-value=2.8e-43  Score=305.99  Aligned_cols=199  Identities=19%  Similarity=0.208  Sum_probs=156.9

Q ss_pred             HHHHHHH---HHHHHhcCCCcccceeeeeeeCCcceEEEEecCCCCHHHhhcCCCc----hHHHHHHHHHHHhchhhcCC
Q 044022           13 YGSCINN---ITYAAQMSHNHILKRIGCCLQTPIPILVFQSVEYGTLRDCIFGAPL----PRLKIASDIVNSLAYLHFGF   85 (241)
Q Consensus        13 ~~~~~~e---~~~l~~l~h~~iv~~~~~~~~~~~~~lv~e~~~~~sL~~~l~~~~~----~~~~~~~~i~~~l~~lh~~~   85 (241)
                      ...+.+|   +.+++.++|||||+++++|.+.+.+|+|||||+||+|.+++.....    ....++.||+.||.|||   
T Consensus       233 ~~~~~~E~~~l~ll~~~~HP~IV~l~~~f~~~~~lylVmEy~~GGdL~~~l~~~~~l~E~~a~~y~~qIl~aL~yLH---  309 (689)
T 3v5w_A          233 ETLALNERIMLSLVSTGDCPFIVCMSYAFHTPDKLSFILDLMNGGDLHYHLSQHGVFSEADMRFYAAEIILGLEHMH---  309 (689)
T ss_dssp             HHHHHHHHHHHHHHSSSCCTTBCCEEEEEECSSEEEEEECCCCSCBHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHH---
T ss_pred             HHHHHHHHHHHHHHhhCCCCCEeEEEEEEEECCEEEEEEecCCCCcHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHH---
Confidence            3344444   5666778999999999999999999999999999999999865432    46789999999999999   


Q ss_pred             CCCceeccCCCCCeeecCCCCeEEeeccCceecCCCCcceeecccccCCCccCcccccc-cCCCcchhhHHHHHHHHHHH
Q 044022           86 PRPIVLRNFKTQNILFNEENVAKWFDFLLSISIPEGETHITTDRVIGTRGYSAPEYISI-CVLNEKSNVFSFGAFLFELL  164 (241)
Q Consensus        86 ~~~ivh~dl~~~nil~~~~~~~~l~df~~~~~~~~~~~~~~~~~~~~~~~~~aPE~~~~-~~~~~~~Di~s~G~~~~~~~  164 (241)
                      +++|+||||||+|||++.+|.+||+|||+|........    .+.+||+.|+|||++.. ..++.++|+||+||++|+|+
T Consensus       310 ~~gIiHRDLKPeNILld~~G~vKL~DFGlA~~~~~~~~----~t~~GTp~YmAPEvl~~~~~y~~~vDiWSLGvilYEmL  385 (689)
T 3v5w_A          310 NRFVVYRDLKPANILLDEHGHVRISDLGLACDFSKKKP----HASVGTHGYMAPEVLQKGVAYDSSADWFSLGCMLFKLL  385 (689)
T ss_dssp             TTTEECCCCSGGGEEECTTSCEEECCCTTCEECSSCCC----CSCCSCGGGCCHHHHSTTCCCCTHHHHHHHHHHHHHHH
T ss_pred             HCCccccCCchHHeEEeCCCCEEecccceeeecCCCCC----CCccCCcCccCHHHHhCCCCCCcHHHHHHHHHHHHHHH
Confidence            99999999999999999999999999999987655432    34589999999999964 57899999999999999999


Q ss_pred             hcCcccccccccCCCcccchHHHHHHHhhhcccCCCCCCccccCCCchhHHHHHHHHHHHHHHhccCCCCCCCCC
Q 044022          165 AGRIHIWDLLKDTHDHGCFFNEYLKNYLEDKRFTGIPAPIIVQDIPCIEKEQQLHASAQLTLECVNNSPEDRPTM  239 (241)
Q Consensus       165 ~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~cl~~~p~~Rpt~  239 (241)
                      +|++||......      ...+......... . ..     ...        .++.+.+|+.+||..||++|++.
T Consensus       386 tG~~PF~~~~~~------~~~~i~~~i~~~~-~-~~-----p~~--------~S~~a~dLI~~lL~~dP~~Rl~~  439 (689)
T 3v5w_A          386 RGHSPFRQHKTK------DKHEIDRMTLTMA-V-EL-----PDS--------FSPELRSLLEGLLQRDVNRRLGC  439 (689)
T ss_dssp             HSSCTTCGGGCC------CHHHHHHHHHHCC-C-CC-----CTT--------SCHHHHHHHHHHTCSCGGGCTTC
T ss_pred             hCCCCCCCCChH------HHHHHHHhhcCCC-C-CC-----Ccc--------CCHHHHHHHHHHccCCHhHCCCC
Confidence            999999652111      1111111111111 0 11     111        22578899999999999999984


No 20 
>3uim_A Brassinosteroid insensitive 1-associated receptor; kinase, protein kinase, transferase; HET: SEP TPO ANP; 2.20A {Arabidopsis thaliana} PDB: 3ulz_A* 3tl8_A*
Probab=100.00  E-value=1.7e-42  Score=282.38  Aligned_cols=232  Identities=28%  Similarity=0.444  Sum_probs=178.3

Q ss_pred             CcccccccccccHHHHHHHHHHHHhcCCCcccceeeeeeeCCcceEEEEecCCCCHHHhhcCCC-----c---hHHHHHH
Q 044022            1 MKFYGHEYHRHTYGSCINNITYAAQMSHNHILKRIGCCLQTPIPILVFQSVEYGTLRDCIFGAP-----L---PRLKIAS   72 (241)
Q Consensus         1 iK~~~~~~~~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~~~~~~~lv~e~~~~~sL~~~l~~~~-----~---~~~~~~~   72 (241)
                      ||++..........++.+|++++++++||||+++++++...+..++||||+++|+|.+++....     .   .+..++.
T Consensus        59 vK~~~~~~~~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~i~~  138 (326)
T 3uim_A           59 VKRLKEERTQGGELQFQTEVEMISMAVHRNLLRLRGFCMTPTERLLVYPYMANGSVASCLRERPESQPPLDWPKRQRIAL  138 (326)
T ss_dssp             EEECCC-----CCCHHHHHHHGGGTCCCTTBCCCCEEECCSSCCEEEEECCTTCBHHHHHHCCSTTCCCCCHHHHHHHHH
T ss_pred             EEEeccccCchHHHHHHHHHHHHHhccCCCccceEEEEecCCceEEEEEeccCCCHHHHHHhccccCCCCCHHHHHHHHH
Confidence            3555544444455579999999999999999999999999999999999999999999987642     1   4678999


Q ss_pred             HHHHHhchhhcCCCC---CceeccCCCCCeeecCCCCeEEeeccCceecCCCCcceeecccccCCCccCcccccccCCCc
Q 044022           73 DIVNSLAYLHFGFPR---PIVLRNFKTQNILFNEENVAKWFDFLLSISIPEGETHITTDRVIGTRGYSAPEYISICVLNE  149 (241)
Q Consensus        73 ~i~~~l~~lh~~~~~---~ivh~dl~~~nil~~~~~~~~l~df~~~~~~~~~~~~~~~~~~~~~~~~~aPE~~~~~~~~~  149 (241)
                      +++.||.|||   +.   +++||||||+|||++.++.++|+|||.+.......... .....||+.|+|||++.+..++.
T Consensus       139 ~i~~~l~~lH---~~~~~~ivH~Dlkp~Nil~~~~~~~kl~Dfg~~~~~~~~~~~~-~~~~~gt~~y~aPE~~~~~~~~~  214 (326)
T 3uim_A          139 GSARGLAYLH---DHCDPKIIHRDVKAANILLDEEFEAVVGDFGLAKLMDYKDTHV-TTAVRGTIGHIAPEYLSTGKSSE  214 (326)
T ss_dssp             HHHHHHHHHH---HSSSSCEECCCCSGGGEEECTTCCEEECCCSSCEECCSSSSCE-ECCCCSCGGGCCHHHHHHSEECH
T ss_pred             HHHHHHHHHH---hCCCCCeEeCCCchhhEEECCCCCEEeccCccccccCcccccc-cccccCCcCccCHHHhccCCCCc
Confidence            9999999999   66   99999999999999999999999999998765433322 23456899999999998888999


Q ss_pred             chhhHHHHHHHHHHHhcCcccccccccCCCcccchHHHHHHHhhhcccCCCCCCccccCCCchhHHHHHHHHHHHHHHhc
Q 044022          150 KSNVFSFGAFLFELLAGRIHIWDLLKDTHDHGCFFNEYLKNYLEDKRFTGIPAPIIVQDIPCIEKEQQLHASAQLTLECV  229 (241)
Q Consensus       150 ~~Di~s~G~~~~~~~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~cl  229 (241)
                      ++||||||+++|+|++|..||..... .........++..............+.......+    ...+..+.+++.+||
T Consensus       215 ~~Di~slG~il~~l~~g~~pf~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~----~~~~~~l~~li~~cl  289 (326)
T 3uim_A          215 KTDVFGYGVMLLELITGQRAFDLARL-ANDDDVMLLDWVKGLLKEKKLEALVDVDLQGNYK----DEEVEQLIQVALLCT  289 (326)
T ss_dssp             HHHHHHHHHHHHHHHHCCCSBCHHHH-TTTSCSBHHHHHTTTTSSCCSTTSSCTTCTTSCC----HHHHHHHHHHHHHHT
T ss_pred             cccchhHHHHHHHHHhCCCccccccc-ccccchhHHHHHHHHhhchhhhhhcChhhccccC----HHHHHHHHHHHHHHh
Confidence            99999999999999999999964211 1112233444444444444444443433333322    466788999999999


Q ss_pred             cCCCCCCCCCCC
Q 044022          230 NNSPEDRPTMVD  241 (241)
Q Consensus       230 ~~~p~~Rpt~~e  241 (241)
                      +.||++|||++|
T Consensus       290 ~~dP~~Rps~~e  301 (326)
T 3uim_A          290 QSSPMERPKMSE  301 (326)
T ss_dssp             CSCGGGSCCHHH
T ss_pred             CcCCccCCCHHH
Confidence            999999999853


No 21 
>2qkw_B Protein kinase; three-helix bundle motif, AVRPTO-PTO duplex, layered beta- sheets, transferas; HET: SEP TPO; 3.20A {Solanum pimpinellifolium} PDB: 3hgk_A*
Probab=100.00  E-value=5.1e-42  Score=279.07  Aligned_cols=221  Identities=31%  Similarity=0.466  Sum_probs=173.7

Q ss_pred             ccHHHHHHHHHHHHhcCCCcccceeeeeeeCCcceEEEEecCCCCHHHhhcCCC--------chHHHHHHHHHHHhchhh
Q 044022           11 HTYGSCINNITYAAQMSHNHILKRIGCCLQTPIPILVFQSVEYGTLRDCIFGAP--------LPRLKIASDIVNSLAYLH   82 (241)
Q Consensus        11 ~~~~~~~~e~~~l~~l~h~~iv~~~~~~~~~~~~~lv~e~~~~~sL~~~l~~~~--------~~~~~~~~~i~~~l~~lh   82 (241)
                      ...+.+.+|++++++++||||+++++++...+..++||||+++|+|.+++....        ..++.++.+++.||.|||
T Consensus        77 ~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~i~~~i~~~l~~lH  156 (321)
T 2qkw_B           77 QGIEEFETEIETLSFCRHPHLVSLIGFCDERNEMILIYKYMENGNLKRHLYGSDLPTMSMSWEQRLEICIGAARGLHYLH  156 (321)
T ss_dssp             SHHHHHHHHHHGGGSCCCTTBCCEEEECCCTTCCEEEEECCTTCBTGGGSSSSCCCSCCCCHHHHHHHHHHHHHHHHHHH
T ss_pred             HHHHHHHHHHHHHHhCCCCCEeeEEEEEcCCCeEEEEEEcCCCCcHHHHHhccCCCccccCHHHHHHHHHHHHHHHHHhc
Confidence            456789999999999999999999999999999999999999999999986542        146789999999999999


Q ss_pred             cCCCCCceeccCCCCCeeecCCCCeEEeeccCceecCCCCcceeecccccCCCccCcccccccCCCcchhhHHHHHHHHH
Q 044022           83 FGFPRPIVLRNFKTQNILFNEENVAKWFDFLLSISIPEGETHITTDRVIGTRGYSAPEYISICVLNEKSNVFSFGAFLFE  162 (241)
Q Consensus        83 ~~~~~~ivh~dl~~~nil~~~~~~~~l~df~~~~~~~~~~~~~~~~~~~~~~~~~aPE~~~~~~~~~~~Di~s~G~~~~~  162 (241)
                         +.+++||||||+||+++.++.+||+|||.+................|++.|+|||++.+..++.++||||||+++|+
T Consensus       157 ---~~~ivH~dlkp~Nil~~~~~~~kl~Dfg~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Di~slG~il~e  233 (321)
T 2qkw_B          157 ---TRAIIHRDVKSINILLDENFVPKITDFGISKKGTELDQTHLSTVVKGTLGYIDPEYFIKGRLTEKSDVYSFGVVLFE  233 (321)
T ss_dssp             ---HTTEECSCCCSTTEEECTTCCEEECCCTTCEECSSSSCCCCBCCCEEETTTCCHHHHHHCBCCTHHHHHHHHHHHHH
T ss_pred             ---CCCeecCCCCHHHEEECCCCCEEEeecccccccccccccccccccCCCccccCHHHhcCCCCCcccchHhHHHHHHH
Confidence               89999999999999999999999999999986543322222234468899999999988899999999999999999


Q ss_pred             HHhcCcccccccccCCCcccchHHHHHHHhhhcccCCCCCCccccCCCchhHHHHHHHHHHHHHHhccCCCCCCCCCCC
Q 044022          163 LLAGRIHIWDLLKDTHDHGCFFNEYLKNYLEDKRFTGIPAPIIVQDIPCIEKEQQLHASAQLTLECVNNSPEDRPTMVD  241 (241)
Q Consensus       163 ~~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~cl~~~p~~Rpt~~e  241 (241)
                      |++|+.||......   ......++..............++......    ....+..+.+++.+||+.||++|||++|
T Consensus       234 ll~g~~p~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~----~~~~~~~l~~li~~~l~~dP~~Rps~~e  305 (321)
T 2qkw_B          234 VLCARSAIVQSLPR---EMVNLAEWAVESHNNGQLEQIVDPNLADKI----RPESLRKFGDTAVKCLALSSEDRPSMGD  305 (321)
T ss_dssp             HHHCCTTCSCSSSS---SCCCHHHHTHHHHTTTCCCSSSSSSCTTCS----CHHHHHHHHHHHHHHTCSSGGGSCCHHH
T ss_pred             HHhCCCcccccCcH---HHHHHHHHhhhccccccHHHhcChhhcccc----CHHHHHHHHHHHHHHcCCCcccCcCHHH
Confidence            99999999653222   112222222222333333333333322222    2366788999999999999999999853


No 22 
>2psq_A Fibroblast growth factor receptor 2; kinase domain fold consisting of N- and C-lobes, transferase; 2.40A {Homo sapiens} SCOP: d.144.1.7 PDB: 1xr0_A
Probab=100.00  E-value=1.2e-42  Score=287.99  Aligned_cols=215  Identities=20%  Similarity=0.303  Sum_probs=168.8

Q ss_pred             CcccccccccccHHHHHHHHHHHHhc-CCCcccceeeeeeeCCcceEEEEecCCCCHHHhhcCCC---------------
Q 044022            1 MKFYGHEYHRHTYGSCINNITYAAQM-SHNHILKRIGCCLQTPIPILVFQSVEYGTLRDCIFGAP---------------   64 (241)
Q Consensus         1 iK~~~~~~~~~~~~~~~~e~~~l~~l-~h~~iv~~~~~~~~~~~~~lv~e~~~~~sL~~~l~~~~---------------   64 (241)
                      ||++.........+.+.+|+++++++ +||||++++++|...+..++||||+++|+|.+++....               
T Consensus       118 vK~~~~~~~~~~~~~~~~E~~~l~~l~~hpnIv~~~~~~~~~~~~~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~  197 (370)
T 2psq_A          118 VKMLKDDATEKDLSDLVSEMEMMKMIGKHKNIINLLGACTQDGPLYVIVEYASKGNLREYLRARRPPGMEYSYDINRVPE  197 (370)
T ss_dssp             EEECCTTCBHHHHHHHHHHHHHHHHSCCCTTBCCEEEEECSSSSCEEEEECCTTCBHHHHHHHTCCC-----------CC
T ss_pred             EEEecCCcCHHHHHHHHHHHHHHHHhcCCCCEeeEEEEEccCCCEEEEEEcCCCCCHHHHHHhhCCcccccccccccccc
Confidence            35555444445567899999999999 89999999999999999999999999999999986532               


Q ss_pred             -----chHHHHHHHHHHHhchhhcCCCCCceeccCCCCCeeecCCCCeEEeeccCceecCCCCcceeecccccCCCccCc
Q 044022           65 -----LPRLKIASDIVNSLAYLHFGFPRPIVLRNFKTQNILFNEENVAKWFDFLLSISIPEGETHITTDRVIGTRGYSAP  139 (241)
Q Consensus        65 -----~~~~~~~~~i~~~l~~lh~~~~~~ivh~dl~~~nil~~~~~~~~l~df~~~~~~~~~~~~~~~~~~~~~~~~~aP  139 (241)
                           ...+.++.||+.||.|||   +++++||||||+|||++.++.+||+|||++................+++.|+||
T Consensus       198 ~~~~~~~~~~i~~qi~~aL~~LH---~~~ivHrDlkp~NIll~~~~~~kl~DFG~a~~~~~~~~~~~~~~~~~t~~y~aP  274 (370)
T 2psq_A          198 EQMTFKDLVSCTYQLARGMEYLA---SQKCIHRDLAARNVLVTENNVMKIADFGLARDINNIDYYKKTTNGRLPVKWMAP  274 (370)
T ss_dssp             CCCCHHHHHHHHHHHHHHHHHHH---HTTEECSCCCGGGEEECTTCCEEECCCSSCEETTCCCTTCTTTTTTSCGGGCCH
T ss_pred             ccCCHHHHHHHHHHHHHHHHHHH---hCCeeccccchhhEEECCCCCEEEccccCCcccCcccceecccCCCcccceECH
Confidence                 135678999999999999   899999999999999999999999999999876544332222334567889999


Q ss_pred             ccccccCCCcchhhHHHHHHHHHHHh-cCcccccccccCCCcccchHHHHHHHhhhcccCCCCCCccccCCCchhHHHHH
Q 044022          140 EYISICVLNEKSNVFSFGAFLFELLA-GRIHIWDLLKDTHDHGCFFNEYLKNYLEDKRFTGIPAPIIVQDIPCIEKEQQL  218 (241)
Q Consensus       140 E~~~~~~~~~~~Di~s~G~~~~~~~~-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  218 (241)
                      |++.+..++.++||||||+++|+|++ |..||.....         .+.... ...+.....     ..        ..+
T Consensus       275 E~~~~~~~~~~~DvwslG~il~ellt~g~~p~~~~~~---------~~~~~~-~~~~~~~~~-----~~--------~~~  331 (370)
T 2psq_A          275 EALFDRVYTHQSDVWSFGVLMWEIFTLGGSPYPGIPV---------EELFKL-LKEGHRMDK-----PA--------NCT  331 (370)
T ss_dssp             HHHHTCCCCHHHHHHHHHHHHHHHHTTSCCSSTTCCG---------GGHHHH-HHTTCCCCC-----CT--------TSC
T ss_pred             hHhcCCCCCcHHHHHHHHHHHHHHHcCCCCCCCCCCH---------HHHHHH-HhcCCCCCC-----CC--------CCC
Confidence            99998899999999999999999999 9999965211         111111 112211111     11        123


Q ss_pred             HHHHHHHHHhccCCCCCCCCCCC
Q 044022          219 HASAQLTLECVNNSPEDRPTMVD  241 (241)
Q Consensus       219 ~~~~~l~~~cl~~~p~~Rpt~~e  241 (241)
                      ..+.+++.+||+.||++|||+.|
T Consensus       332 ~~l~~li~~~l~~dP~~Rpt~~e  354 (370)
T 2psq_A          332 NELYMMMRDCWHAVPSQRPTFKQ  354 (370)
T ss_dssp             HHHHHHHHHHTCSSGGGSCCHHH
T ss_pred             HHHHHHHHHHcCCChhhCcCHHH
Confidence            57899999999999999999853


No 23 
>3fxz_A Serine/threonine-protein kinase PAK 1; transferase, ATP-binding, phosphorylation, allosteric enzyme, alternative splicing, apoptosis, cell junction; HET: TPO FLL; 1.64A {Homo sapiens} SCOP: d.144.1.7 PDB: 3fy0_A* 4daw_A* 3q52_A* 3q53_A* 1yhw_A 1f3m_C 1yhv_A 2hy8_1* 3q4z_A*
Probab=100.00  E-value=1e-41  Score=274.57  Aligned_cols=205  Identities=17%  Similarity=0.251  Sum_probs=165.3

Q ss_pred             ccHHHHHHHHHHHHhcCCCcccceeeeeeeCCcceEEEEecCCCCHHHhhcCCCc---hHHHHHHHHHHHhchhhcCCCC
Q 044022           11 HTYGSCINNITYAAQMSHNHILKRIGCCLQTPIPILVFQSVEYGTLRDCIFGAPL---PRLKIASDIVNSLAYLHFGFPR   87 (241)
Q Consensus        11 ~~~~~~~~e~~~l~~l~h~~iv~~~~~~~~~~~~~lv~e~~~~~sL~~~l~~~~~---~~~~~~~~i~~~l~~lh~~~~~   87 (241)
                      ...+.+.+|+.++++++||||+++++++...+..++||||+++++|.+++.....   ....++.+++.||.|||   +.
T Consensus        59 ~~~~~~~~E~~~l~~l~hp~iv~~~~~~~~~~~~~lv~e~~~~~~L~~~~~~~~~~~~~~~~~~~qi~~~l~~lH---~~  135 (297)
T 3fxz_A           59 PKKELIINEILVMRENKNPNIVNYLDSYLVGDELWVVMEYLAGGSLTDVVTETCMDEGQIAAVCRECLQALEFLH---SN  135 (297)
T ss_dssp             SCHHHHHHHHHHHHHCCCTTBCCEEEEEEETTEEEEEEECCTTCBHHHHHHHSCCCHHHHHHHHHHHHHHHHHHH---HT
T ss_pred             cHHHHHHHHHHHHhcCCCCCCCeEeEEEEECCEEEEEEECCCCCCHHHHHhhcCCCHHHHHHHHHHHHHHHHHHH---hC
Confidence            3467789999999999999999999999999999999999999999999876533   46789999999999999   89


Q ss_pred             CceeccCCCCCeeecCCCCeEEeeccCceecCCCCcceeecccccCCCccCcccccccCCCcchhhHHHHHHHHHHHhcC
Q 044022           88 PIVLRNFKTQNILFNEENVAKWFDFLLSISIPEGETHITTDRVIGTRGYSAPEYISICVLNEKSNVFSFGAFLFELLAGR  167 (241)
Q Consensus        88 ~ivh~dl~~~nil~~~~~~~~l~df~~~~~~~~~~~~~~~~~~~~~~~~~aPE~~~~~~~~~~~Di~s~G~~~~~~~~g~  167 (241)
                      +++||||||+|||++.++.+||+|||++.........  .....||+.|+|||++.+..++.++||||||+++|+|++|.
T Consensus       136 ~i~H~Dlkp~Nil~~~~~~~kl~Dfg~~~~~~~~~~~--~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~ell~g~  213 (297)
T 3fxz_A          136 QVIHRDIKSDNILLGMDGSVKLTDFGFCAQITPEQSK--RSTMVGTPYWMAPEVVTRKAYGPKVDIWSLGIMAIEMIEGE  213 (297)
T ss_dssp             TEECCCCSGGGEEECTTCCEEECCCTTCEECCSTTCC--BCCCCSCGGGCCHHHHHCSCBCTHHHHHHHHHHHHHHHHSS
T ss_pred             CceeCCCCHHHEEECCCCCEEEeeCCCceecCCcccc--cCCccCCcCccChhhhcCCCCCcHHHHHHHHHHHHHHHhCC
Confidence            9999999999999999999999999998876543322  23457899999999999999999999999999999999999


Q ss_pred             cccccccccCCCcccchHHHHHHHhhhcccCCCCCCccccCCCchhHHHHHHHHHHHHHHhccCCCCCCCCCCC
Q 044022          168 IHIWDLLKDTHDHGCFFNEYLKNYLEDKRFTGIPAPIIVQDIPCIEKEQQLHASAQLTLECVNNSPEDRPTMVD  241 (241)
Q Consensus       168 ~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~cl~~~p~~Rpt~~e  241 (241)
                      .||....         ..+.......... .....   ..        ..+..+.+++.+||+.||++|||++|
T Consensus       214 ~pf~~~~---------~~~~~~~~~~~~~-~~~~~---~~--------~~~~~~~~li~~~l~~dp~~Rps~~e  266 (297)
T 3fxz_A          214 PPYLNEN---------PLRALYLIATNGT-PELQN---PE--------KLSAIFRDFLNRCLEMDVEKRGSAKE  266 (297)
T ss_dssp             CTTTTSC---------HHHHHHHHHHHCS-CCCSC---GG--------GSCHHHHHHHHHHSCSSTTTSCCHHH
T ss_pred             CCCCCCC---------HHHHHHHHHhCCC-CCCCC---cc--------ccCHHHHHHHHHHccCChhHCcCHHH
Confidence            9995421         1111111111111 11111   11        22357889999999999999999753


No 24 
>3zgw_A Maternal embryonic leucine zipper kinase; transferase; HET: ANP; 2.60A {Homo sapiens}
Probab=100.00  E-value=4.2e-42  Score=282.15  Aligned_cols=213  Identities=21%  Similarity=0.275  Sum_probs=159.0

Q ss_pred             CcccccccccccHHHHHHHHHHHHhcCCCcccceeeeeeeCCcceEEEEecCCCCHHHhhcCCC----chHHHHHHHHHH
Q 044022            1 MKFYGHEYHRHTYGSCINNITYAAQMSHNHILKRIGCCLQTPIPILVFQSVEYGTLRDCIFGAP----LPRLKIASDIVN   76 (241)
Q Consensus         1 iK~~~~~~~~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~~~~~~~lv~e~~~~~sL~~~l~~~~----~~~~~~~~~i~~   76 (241)
                      ||++.........+.+.+|++++++++||||+++++++...+..++||||+++|+|.+++....    .....++.|++.
T Consensus        40 iK~~~~~~~~~~~~~~~~Ei~~l~~l~hpnIv~l~~~~~~~~~~~lv~E~~~gg~L~~~l~~~~~l~~~~~~~i~~qi~~  119 (347)
T 3zgw_A           40 IKIMDKNTLGSDLPRIKTEIEALKNLRHQHICQLYHVLETANKIFMVLEYCPGGELFDYIISQDRLSEEETRVVFRQIVS  119 (347)
T ss_dssp             EEEEESSCC---CCHHHHHHHHHHTCCCTTBCCEEEEEECSSEEEEEEECCTTCBHHHHHHHHSSCCHHHHHHHHHHHHH
T ss_pred             EEEEEccccchHHHHHHHHHHHHHhCCCCCEeeEEEEEEeCCEEEEEEeCCCCCCHHHHHHHcCCCCHHHHHHHHHHHHH
Confidence            4555544444456789999999999999999999999999999999999999999999985432    256789999999


Q ss_pred             HhchhhcCCCCCceeccCCCCCeeecCCCCeEEeeccCceecCCCCcceeecccccCCCccCcccccccCC-CcchhhHH
Q 044022           77 SLAYLHFGFPRPIVLRNFKTQNILFNEENVAKWFDFLLSISIPEGETHITTDRVIGTRGYSAPEYISICVL-NEKSNVFS  155 (241)
Q Consensus        77 ~l~~lh~~~~~~ivh~dl~~~nil~~~~~~~~l~df~~~~~~~~~~~~~~~~~~~~~~~~~aPE~~~~~~~-~~~~Di~s  155 (241)
                      ||.|||   +.+++||||||+||+++.++.+||+|||++......... ......||+.|+|||++.+..+ +.++||||
T Consensus       120 aL~~LH---~~givHrDlkp~NIll~~~~~~kL~DFG~a~~~~~~~~~-~~~~~~gt~~y~aPE~~~~~~~~~~~~DiwS  195 (347)
T 3zgw_A          120 AVAYVH---SQGYAHRDLKPENLLFDEYHKLKLIDFGLCAKPKGNKDY-HLQTCCGSLAYAAPELIQGKSYLGSEADVWS  195 (347)
T ss_dssp             HHHHHH---HTTCBCCCCCGGGEEECTTSCEEECCCTTCBC---------------CGGGCCHHHHTTC---CCHHHHHH
T ss_pred             HHHHHH---HCCeEeCCccHHHEEEcCCCCEEEEeccCcccccCCCCc-cccccCCccCccCHHHHcCCCCCCcHhHHHH
Confidence            999999   899999999999999999999999999998755432211 1234568999999999988775 88999999


Q ss_pred             HHHHHHHHHhcCcccccccccCCCcccchHHHHHHHhhhcccCCCCCCccccCCCchhHHHHHHHHHHHHHHhccCCCCC
Q 044022          156 FGAFLFELLAGRIHIWDLLKDTHDHGCFFNEYLKNYLEDKRFTGIPAPIIVQDIPCIEKEQQLHASAQLTLECVNNSPED  235 (241)
Q Consensus       156 ~G~~~~~~~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~cl~~~p~~  235 (241)
                      +|+++|+|++|..||...         ...+....... +.. .     ....        .+..+.+++.+||+.||++
T Consensus       196 lG~il~ell~g~~Pf~~~---------~~~~~~~~i~~-~~~-~-----~p~~--------~s~~~~~li~~~L~~dP~~  251 (347)
T 3zgw_A          196 MGILLYVLMCGFLPFDDD---------NVMALYKKIMR-GKY-D-----VPKW--------LSPSSILLLQQMLQVDPKK  251 (347)
T ss_dssp             HHHHHHHHHHSSCSSCCS---------SHHHHHHHHHH-TCC-C-----CCTT--------CCHHHHHHHHHHTCSSGGG
T ss_pred             HHHHHHHHHHCCCCCCCC---------CHHHHHHHHHc-CCC-C-----CCCC--------CCHHHHHHHHHHcccCHhH
Confidence            999999999999999641         11222222211 111 0     1111        1256789999999999999


Q ss_pred             CCCCCC
Q 044022          236 RPTMVD  241 (241)
Q Consensus       236 Rpt~~e  241 (241)
                      |||++|
T Consensus       252 Rps~~e  257 (347)
T 3zgw_A          252 RISMKN  257 (347)
T ss_dssp             SCCHHH
T ss_pred             CcCHHH
Confidence            999853


No 25 
>3fe3_A MAP/microtubule affinity-regulating kinase 3; serine/threonine protein kinase, MARK;PAR-1, UBA domai TAK1;P78;MARK3, ATP-binding; 1.90A {Homo sapiens} PDB: 2qnj_A 1y8g_A* 1zmw_A 1zmu_A 1zmv_A 2wzj_A 2r0i_A 2hak_A 3iec_A
Probab=100.00  E-value=8.3e-42  Score=278.61  Aligned_cols=211  Identities=19%  Similarity=0.270  Sum_probs=166.1

Q ss_pred             Cccccccc-ccccHHHHHHHHHHHHhcCCCcccceeeeeeeCCcceEEEEecCCCCHHHhhcCCC----chHHHHHHHHH
Q 044022            1 MKFYGHEY-HRHTYGSCINNITYAAQMSHNHILKRIGCCLQTPIPILVFQSVEYGTLRDCIFGAP----LPRLKIASDIV   75 (241)
Q Consensus         1 iK~~~~~~-~~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~~~~~~~lv~e~~~~~sL~~~l~~~~----~~~~~~~~~i~   75 (241)
                      ||++.... .....+++.+|++++++++||||+++++++...+..++||||+++++|.+++....    .....++.|++
T Consensus        45 iK~~~~~~~~~~~~~~~~~E~~~l~~l~hpnIv~l~~~~~~~~~~~lv~e~~~~~~L~~~l~~~~~l~~~~~~~~~~qi~  124 (328)
T 3fe3_A           45 IKIIDKTQLNPTSLQKLFREVRIMKILNHPNIVKLFEVIETEKTLYLIMEYASGGEVFDYLVAHGRMKEKEARSKFRQIV  124 (328)
T ss_dssp             EEEEEGGGSCHHHHHHHHHHHHHHHHCCCTTBCCEEEEEECSSEEEEEECCCTTCBHHHHHHHHCCCCHHHHHHHHHHHH
T ss_pred             EEEEEhhcCCHHHHHHHHHHHHHHHhCCCCCEeeEEEEEEECCEEEEEEECCCCCcHHHHHHHcCCCCHHHHHHHHHHHH
Confidence            35544332 23456778899999999999999999999999999999999999999999985432    24678999999


Q ss_pred             HHhchhhcCCCCCceeccCCCCCeeecCCCCeEEeeccCceecCCCCcceeecccccCCCccCcccccccCCC-cchhhH
Q 044022           76 NSLAYLHFGFPRPIVLRNFKTQNILFNEENVAKWFDFLLSISIPEGETHITTDRVIGTRGYSAPEYISICVLN-EKSNVF  154 (241)
Q Consensus        76 ~~l~~lh~~~~~~ivh~dl~~~nil~~~~~~~~l~df~~~~~~~~~~~~~~~~~~~~~~~~~aPE~~~~~~~~-~~~Di~  154 (241)
                      .||.|||   +.+++||||||+||+++.++.+||+|||++........   .....||+.|+|||++.+..+. .++|||
T Consensus       125 ~al~~lH---~~~ivHrDlkp~NIll~~~~~~kl~DFG~a~~~~~~~~---~~~~~gt~~y~aPE~~~~~~~~~~~~Diw  198 (328)
T 3fe3_A          125 SAVQYCH---QKRIVHRDLKAENLLLDADMNIKIADFGFSNEFTVGGK---LDAFCGAPPYAAPELFQGKKYDGPEVDVW  198 (328)
T ss_dssp             HHHHHHH---HTTCCCSCCCGGGEEECTTSCEEECSTTCCGGGSSSCG---GGTTSSSGGGCCHHHHHTCCCCSHHHHHH
T ss_pred             HHHHHHH---HCCEeccCCCHHHEEEcCCCCEEEeeccCceecCCCCc---cccccCCcceeCcccccCCCcCCchhhhh
Confidence            9999999   89999999999999999999999999999976544322   2345789999999999887765 789999


Q ss_pred             HHHHHHHHHHhcCcccccccccCCCcccchHHHHHHHhhhcccCCCCCCccccCCCchhHHHHHHHHHHHHHHhccCCCC
Q 044022          155 SFGAFLFELLAGRIHIWDLLKDTHDHGCFFNEYLKNYLEDKRFTGIPAPIIVQDIPCIEKEQQLHASAQLTLECVNNSPE  234 (241)
Q Consensus       155 s~G~~~~~~~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~cl~~~p~  234 (241)
                      |+|+++|+|++|+.||...         ...+....... +.. .     +..        ..+..+.+++.+||..||+
T Consensus       199 slG~il~ell~g~~pf~~~---------~~~~~~~~i~~-~~~-~-----~p~--------~~s~~~~~li~~~L~~dP~  254 (328)
T 3fe3_A          199 SLGVILYTLVSGSLPFDGQ---------NLKELRERVLR-GKY-R-----IPF--------YMSTDCENLLKRFLVLNPI  254 (328)
T ss_dssp             HHHHHHHHHHHSSCSSCCS---------SHHHHHHHHHH-CCC-C-----CCT--------TSCHHHHHHHHHHCCSSTT
T ss_pred             hhHHHHHHHHhCCCCCCCC---------CHHHHHHHHHh-CCC-C-----CCC--------CCCHHHHHHHHHHCCCChh
Confidence            9999999999999999542         12222222221 111 0     111        1225688999999999999


Q ss_pred             CCCCCCC
Q 044022          235 DRPTMVD  241 (241)
Q Consensus       235 ~Rpt~~e  241 (241)
                      +|||++|
T Consensus       255 ~R~t~~e  261 (328)
T 3fe3_A          255 KRGTLEQ  261 (328)
T ss_dssp             TSCCHHH
T ss_pred             HCcCHHH
Confidence            9999853


No 26 
>3cbl_A C-FES, proto-oncogene tyrosine-protein kinase FES/FPS; V-FES, fujinami, avian sarcoma, viral, feline virus, SGC; HET: STU; 1.75A {Homo sapiens} PDB: 3bkb_A* 3cd3_A* 4e93_A*
Probab=100.00  E-value=7.8e-43  Score=289.91  Aligned_cols=215  Identities=22%  Similarity=0.307  Sum_probs=166.1

Q ss_pred             CcccccccccccHHHHHHHHHHHHhcCCCcccceeeeeeeCCcceEEEEecCCCCHHHhhcCCC-----chHHHHHHHHH
Q 044022            1 MKFYGHEYHRHTYGSCINNITYAAQMSHNHILKRIGCCLQTPIPILVFQSVEYGTLRDCIFGAP-----LPRLKIASDIV   75 (241)
Q Consensus         1 iK~~~~~~~~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~~~~~~~lv~e~~~~~sL~~~l~~~~-----~~~~~~~~~i~   75 (241)
                      ||.+.........++|.+|++++++++||||+++++++...+..++||||+++|+|.+++....     ...+.++.|++
T Consensus       144 vK~~~~~~~~~~~~~~~~E~~~l~~l~hpniv~~~~~~~~~~~~~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~qi~  223 (377)
T 3cbl_A          144 VKSCRETLPPDLKAKFLQEARILKQYSHPNIVRLIGVCTQKQPIYIVMELVQGGDFLTFLRTEGARLRVKTLLQMVGDAA  223 (377)
T ss_dssp             EEECCTTSCHHHHTTTTHHHHHHTTCCCTTBCCEEEEECSSSSCEEEEECCTTCBHHHHHHHHGGGCCHHHHHHHHHHHH
T ss_pred             EEEccccCCHHHHHHHHHHHHHHHhCCCCCEEEEEEEEecCCCcEEEEEcCCCCCHHHHHHhcCCCCCHHHHHHHHHHHH
Confidence            3555444333455678999999999999999999999999999999999999999999986532     24678999999


Q ss_pred             HHhchhhcCCCCCceeccCCCCCeeecCCCCeEEeeccCceecCCCCcceeecccccCCCccCcccccccCCCcchhhHH
Q 044022           76 NSLAYLHFGFPRPIVLRNFKTQNILFNEENVAKWFDFLLSISIPEGETHITTDRVIGTRGYSAPEYISICVLNEKSNVFS  155 (241)
Q Consensus        76 ~~l~~lh~~~~~~ivh~dl~~~nil~~~~~~~~l~df~~~~~~~~~~~~~~~~~~~~~~~~~aPE~~~~~~~~~~~Di~s  155 (241)
                      .||.|||   +.+++||||||+|||++.++.+||+|||++................++..|+|||.+.+..++.++||||
T Consensus       224 ~~l~~LH---~~~ivHrDlkp~Nil~~~~~~~kl~DfG~s~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Dvws  300 (377)
T 3cbl_A          224 AGMEYLE---SKCCIHRDLAARNCLVTEKNVLKISDFGMSREEADGVYAASGGLRQVPVKWTAPEALNYGRYSSESDVWS  300 (377)
T ss_dssp             HHHHHHH---HTTEECSCCSGGGEEECTTCCEEECCGGGCEECTTSEEECCSSCCEEEGGGSCHHHHHHCEEEHHHHHHH
T ss_pred             HHHHHHH---HCCcCCcccCHHHEEEcCCCcEEECcCCCceecCCCceeecCCCCCCCcCcCCHhHhccCCCCchhhHHH
Confidence            9999999   8999999999999999999999999999998654432211112223567799999999888999999999


Q ss_pred             HHHHHHHHHh-cCcccccccccCCCcccchHHHHHHHhhhcccCCCCCCccccCCCchhHHHHHHHHHHHHHHhccCCCC
Q 044022          156 FGAFLFELLA-GRIHIWDLLKDTHDHGCFFNEYLKNYLEDKRFTGIPAPIIVQDIPCIEKEQQLHASAQLTLECVNNSPE  234 (241)
Q Consensus       156 ~G~~~~~~~~-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~cl~~~p~  234 (241)
                      ||+++|||++ |..||.....         .+ .......+.....+     .        ..+..+.+++.+||+.||+
T Consensus       301 lG~il~el~t~g~~p~~~~~~---------~~-~~~~~~~~~~~~~~-----~--------~~~~~l~~li~~cl~~dP~  357 (377)
T 3cbl_A          301 FGILLWETFSLGASPYPNLSN---------QQ-TREFVEKGGRLPCP-----E--------LCPDAVFRLMEQCWAYEPG  357 (377)
T ss_dssp             HHHHHHHHHTTSCCSSTTSCH---------HH-HHHHHHTTCCCCCC-----T--------TCCHHHHHHHHHHTCSSGG
T ss_pred             HHHHHHHHHhCCCCCCCCCCH---------HH-HHHHHHcCCCCCCC-----C--------CCCHHHHHHHHHHcCCCch
Confidence            9999999998 9999865211         11 11222222111111     1        1225788999999999999


Q ss_pred             CCCCCCC
Q 044022          235 DRPTMVD  241 (241)
Q Consensus       235 ~Rpt~~e  241 (241)
                      +|||++|
T Consensus       358 ~Rps~~~  364 (377)
T 3cbl_A          358 QRPSFST  364 (377)
T ss_dssp             GSCCHHH
T ss_pred             hCcCHHH
Confidence            9999853


No 27 
>3soc_A Activin receptor type-2A; structural genomics consortium, SGC, transferase, protein KI; HET: GVD; 1.95A {Homo sapiens} PDB: 3q4t_A* 4asx_A* 2qlu_A*
Probab=100.00  E-value=9.4e-42  Score=277.71  Aligned_cols=218  Identities=22%  Similarity=0.234  Sum_probs=163.2

Q ss_pred             HHHHHHHHHHHHhcCCCcccceeeeeeeCC----cceEEEEecCCCCHHHhhcCCCc---hHHHHHHHHHHHhchhhcCC
Q 044022           13 YGSCINNITYAAQMSHNHILKRIGCCLQTP----IPILVFQSVEYGTLRDCIFGAPL---PRLKIASDIVNSLAYLHFGF   85 (241)
Q Consensus        13 ~~~~~~e~~~l~~l~h~~iv~~~~~~~~~~----~~~lv~e~~~~~sL~~~l~~~~~---~~~~~~~~i~~~l~~lh~~~   85 (241)
                      ...+.+|+.++++++||||+++++++....    .+++||||+++|+|.+++.....   .+..++.|++.||.|||   
T Consensus        62 ~~~~~~E~~~l~~l~hpniv~~~~~~~~~~~~~~~~~lv~e~~~~g~L~~~l~~~~~~~~~~~~i~~qi~~al~~LH---  138 (322)
T 3soc_A           62 SWQNEYEVYSLPGMKHENILQFIGAEKRGTSVDVDLWLITAFHEKGSLSDFLKANVVSWNELCHIAETMARGLAYLH---  138 (322)
T ss_dssp             HHHHHHHHHTSTTCCCTTBCCEEEEEEEECSSSEEEEEEEECCTTCBHHHHHHHCCBCHHHHHHHHHHHHHHHHHHT---
T ss_pred             HHHHHHHHHHHhcCCCCCchhhcceeccCCCCCceEEEEEecCCCCCHHHHHHhcCCCHHHHHHHHHHHHHHHHHHH---
Confidence            445667999999999999999999998755    36999999999999999976543   46789999999999999   


Q ss_pred             CC----------CceeccCCCCCeeecCCCCeEEeeccCceecCCCCcceeecccccCCCccCcccccc-----cCCCcc
Q 044022           86 PR----------PIVLRNFKTQNILFNEENVAKWFDFLLSISIPEGETHITTDRVIGTRGYSAPEYISI-----CVLNEK  150 (241)
Q Consensus        86 ~~----------~ivh~dl~~~nil~~~~~~~~l~df~~~~~~~~~~~~~~~~~~~~~~~~~aPE~~~~-----~~~~~~  150 (241)
                      +.          +++||||||+|||++.++.+||+|||.+................||+.|+|||++.+     ..++.+
T Consensus       139 ~~~~~l~~~~~~~ivH~Dlkp~Nill~~~~~~kL~DFg~a~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~  218 (322)
T 3soc_A          139 EDIPGLKDGHKPAISHRDIKSKNVLLKNNLTACIADFGLALKFEAGKSAGDTHGQVGTRRYMAPEVLEGAINFQRDAFLR  218 (322)
T ss_dssp             CCEEEETTEEECEEECSCCSGGGEEECTTCCEEECCCTTCEEECTTSCCCCCTTCCCCGGGCCHHHHTTCCCCCHHHHHH
T ss_pred             hhccccccccCCCEEeCCCChHhEEECCCCeEEEccCCcccccccccCccccccCccCccccCHhhcccccccCcCCCcc
Confidence            88          999999999999999999999999999987665443333344578999999999986     355678


Q ss_pred             hhhHHHHHHHHHHHhcCcccccccccCCCcc-------cchHHHHHHHhhhcccCCCCCCccccCCCchhHHHHHHHHHH
Q 044022          151 SNVFSFGAFLFELLAGRIHIWDLLKDTHDHG-------CFFNEYLKNYLEDKRFTGIPAPIIVQDIPCIEKEQQLHASAQ  223 (241)
Q Consensus       151 ~Di~s~G~~~~~~~~g~~p~~~~~~~~~~~~-------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  223 (241)
                      +||||||+++|+|++|+.||...........       ....+..... ....    ..+.+...   ......+..+.+
T Consensus       219 ~DiwslG~il~el~tg~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~----~~~~~~~~---~~~~~~~~~l~~  290 (322)
T 3soc_A          219 IDMYAMGLVLWELASRCTAADGPVDEYMLPFEEEIGQHPSLEDMQEVV-VHKK----KRPVLRDY---WQKHAGMAMLCE  290 (322)
T ss_dssp             HHHHHHHHHHHHHHTTBTTSSSCCCCCCCTTHHHHCSSCCHHHHHHHH-TTSC----CCCCCCGG---GGSSHHHHHHHH
T ss_pred             chhHHHHHHHHHHHhCCCCCCCCcchhccchhhhhccCCchhhhhhhh-hccc----CCCCcccc---ccccchHHHHHH
Confidence            9999999999999999999965322211100       0111111111 1111    11111111   111245577999


Q ss_pred             HHHHhccCCCCCCCCCCC
Q 044022          224 LTLECVNNSPEDRPTMVD  241 (241)
Q Consensus       224 l~~~cl~~~p~~Rpt~~e  241 (241)
                      ++.+||+.||++|||++|
T Consensus       291 li~~cl~~dP~~Rps~~e  308 (322)
T 3soc_A          291 TIEECWDHDAEARLSAGC  308 (322)
T ss_dssp             HHHHHTCSSGGGSCCHHH
T ss_pred             HHHHHccCChhhCcCHHH
Confidence            999999999999999853


No 28 
>3p86_A Serine/threonine-protein kinase CTR1; ETR1, ERS1, ETR2, phosphorylation, transferase; HET: STU; 2.50A {Arabidopsis thaliana} PDB: 3ppz_A*
Probab=100.00  E-value=1.5e-41  Score=275.09  Aligned_cols=214  Identities=25%  Similarity=0.318  Sum_probs=159.1

Q ss_pred             Cccccccc-ccccHHHHHHHHHHHHhcCCCcccceeeeeeeCCcceEEEEecCCCCHHHhhcCCCc-------hHHHHHH
Q 044022            1 MKFYGHEY-HRHTYGSCINNITYAAQMSHNHILKRIGCCLQTPIPILVFQSVEYGTLRDCIFGAPL-------PRLKIAS   72 (241)
Q Consensus         1 iK~~~~~~-~~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~~~~~~~lv~e~~~~~sL~~~l~~~~~-------~~~~~~~   72 (241)
                      ||++.... .....+++.+|++++++++||||+++++++...+..++||||+++|+|.+++.....       .++.++.
T Consensus        65 vK~~~~~~~~~~~~~~~~~E~~~l~~l~hp~iv~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~i~~  144 (309)
T 3p86_A           65 VKILMEQDFHAERVNEFLREVAIMKRLRHPNIVLFMGAVTQPPNLSIVTEYLSRGSLYRLLHKSGAREQLDERRRLSMAY  144 (309)
T ss_dssp             EEEECCCCCSHHHHHHHHHHHHHHHHCCCTTBCCEEEEECSTTCCEEEEECCTTCBHHHHHHSTTHHHHSCHHHHHHHHH
T ss_pred             EEEecCCCCCHHHHHHHHHHHHHHHhCCCCCEeeEEEEEEECCceEEEEecCCCCcHHHHHhhcCCCCCCCHHHHHHHHH
Confidence            35544322 234457799999999999999999999999999999999999999999999976532       3678999


Q ss_pred             HHHHHhchhhcCCCCC--ceeccCCCCCeeecCCCCeEEeeccCceecCCCCcceeecccccCCCccCcccccccCCCcc
Q 044022           73 DIVNSLAYLHFGFPRP--IVLRNFKTQNILFNEENVAKWFDFLLSISIPEGETHITTDRVIGTRGYSAPEYISICVLNEK  150 (241)
Q Consensus        73 ~i~~~l~~lh~~~~~~--ivh~dl~~~nil~~~~~~~~l~df~~~~~~~~~~~~~~~~~~~~~~~~~aPE~~~~~~~~~~  150 (241)
                      |++.||+|||   +.+  ++||||||+||+++.++.+||+|||++........  ......||+.|+|||++.+..++.+
T Consensus       145 qi~~aL~~LH---~~~~~ivH~Dikp~NIll~~~~~~kL~Dfg~a~~~~~~~~--~~~~~~gt~~y~aPE~~~~~~~~~~  219 (309)
T 3p86_A          145 DVAKGMNYLH---NRNPPIVHRNLKSPNLLVDKKYTVKVCDFGLSRLKASTFL--SSKSAAGTPEWMAPEVLRDEPSNEK  219 (309)
T ss_dssp             HHHHHHHHHH---TSSSCCCCTTCCGGGEEECTTCCEEECCCC-------------------CCTTSCHHHHTTCCCCTT
T ss_pred             HHHHHHHHHH---cCCCCEECCCCChhhEEEeCCCcEEECCCCCCcccccccc--ccccCCCCccccChhhhcCCCCCch
Confidence            9999999999   888  99999999999999999999999999875433221  1234568999999999999999999


Q ss_pred             hhhHHHHHHHHHHHhcCcccccccccCCCcccchHHHHHHHhhhcccCCCCCCccccCCCchhHHHHHHHHHHHHHHhcc
Q 044022          151 SNVFSFGAFLFELLAGRIHIWDLLKDTHDHGCFFNEYLKNYLEDKRFTGIPAPIIVQDIPCIEKEQQLHASAQLTLECVN  230 (241)
Q Consensus       151 ~Di~s~G~~~~~~~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~cl~  230 (241)
                      +||||||+++|+|++|+.||....         ..+............     .+...        .+..+.+++.+||+
T Consensus       220 ~DiwslG~il~elltg~~Pf~~~~---------~~~~~~~~~~~~~~~-----~~~~~--------~~~~l~~li~~~l~  277 (309)
T 3p86_A          220 SDVYSFGVILWELATLQQPWGNLN---------PAQVVAAVGFKCKRL-----EIPRN--------LNPQVAAIIEGCWT  277 (309)
T ss_dssp             HHHHHHHHHHHHHHHCCCTTTTSC---------HHHHHHHHHHSCCCC-----CCCTT--------SCHHHHHHHHHHTC
T ss_pred             hhHHHHHHHHHHHHhCCCCCCCCC---------HHHHHHHHHhcCCCC-----CCCcc--------CCHHHHHHHHHHcc
Confidence            999999999999999999996521         111111111111111     11111        22578899999999


Q ss_pred             CCCCCCCCCCC
Q 044022          231 NSPEDRPTMVD  241 (241)
Q Consensus       231 ~~p~~Rpt~~e  241 (241)
                      .||++|||++|
T Consensus       278 ~dP~~Rps~~~  288 (309)
T 3p86_A          278 NEPWKRPSFAT  288 (309)
T ss_dssp             SSGGGSCCHHH
T ss_pred             CChhhCcCHHH
Confidence            99999999753


No 29 
>3tki_A Serine/threonine-protein kinase CHK1; cell checkpoint, transferase-transferase inhib complex; HET: S25; 1.60A {Homo sapiens} PDB: 2qhm_A* 2r0u_A* 3tkh_A* 2qhn_A* 2hy0_A* 2hog_A* 2hxq_A* 2hxl_A* 3f9n_A*
Probab=100.00  E-value=8.8e-42  Score=278.02  Aligned_cols=217  Identities=22%  Similarity=0.251  Sum_probs=164.3

Q ss_pred             CcccccccccccHHHHHHHHHHHHhcCCCcccceeeeeeeCCcceEEEEecCCCCHHHhhcCCCc----hHHHHHHHHHH
Q 044022            1 MKFYGHEYHRHTYGSCINNITYAAQMSHNHILKRIGCCLQTPIPILVFQSVEYGTLRDCIFGAPL----PRLKIASDIVN   76 (241)
Q Consensus         1 iK~~~~~~~~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~~~~~~~lv~e~~~~~sL~~~l~~~~~----~~~~~~~~i~~   76 (241)
                      ||++.........+.+.+|+.++++++||||+++++++...+..++||||+++++|.+++.....    ....++.|++.
T Consensus        37 vK~~~~~~~~~~~~~~~~E~~~l~~l~hpnIv~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~i~~qi~~  116 (323)
T 3tki_A           37 VKIVDMKRAVDCPENIKKEICINKMLNHENVVKFYGHRREGNIQYLFLEYCSGGELFDRIEPDIGMPEPDAQRFFHQLMA  116 (323)
T ss_dssp             EEEEECC-------CHHHHHHHHHHCCCTTBCCEEEEEECSSEEEEEEECCTTEEGGGGSBTTTBCCHHHHHHHHHHHHH
T ss_pred             EEEEEcccccchHHHHHHHHHHHHhCCCCCCCeEEEEEecCCeEEEEEEcCCCCcHHHHHhhcCCCCHHHHHHHHHHHHH
Confidence            35554333334457789999999999999999999999999999999999999999999976532    56789999999


Q ss_pred             HhchhhcCCCCCceeccCCCCCeeecCCCCeEEeeccCceecCCCCcceeecccccCCCccCcccccccCC-CcchhhHH
Q 044022           77 SLAYLHFGFPRPIVLRNFKTQNILFNEENVAKWFDFLLSISIPEGETHITTDRVIGTRGYSAPEYISICVL-NEKSNVFS  155 (241)
Q Consensus        77 ~l~~lh~~~~~~ivh~dl~~~nil~~~~~~~~l~df~~~~~~~~~~~~~~~~~~~~~~~~~aPE~~~~~~~-~~~~Di~s  155 (241)
                      ||.|||   +.+++||||||+|||++.++.+||+|||++................||+.|+|||++.+..+ +.++||||
T Consensus       117 aL~~LH---~~givH~Dlkp~NIll~~~~~~kl~Dfg~a~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~Diws  193 (323)
T 3tki_A          117 GVVYLH---GIGITHRDIKPENLLLDERDNLKISDFGLATVFRYNNRERLLNKMCGTLPYVAPELLKRREFHAEPVDVWS  193 (323)
T ss_dssp             HHHHHH---HTTEECSCCSGGGEEECTTCCEEECCCTTCEECEETTEECCBCSCCSCGGGSCHHHHHCSSBCHHHHHHHH
T ss_pred             HHHHHH---HCCccccccchHHEEEeCCCCEEEEEeeccceeccCCcccccCCCccCcCccCcHHhccCCCCCCcccHHH
Confidence            999999   89999999999999999999999999999976543332222344578999999999987765 67899999


Q ss_pred             HHHHHHHHHhcCcccccccccCCCcccchHHHHHHHhhhcccCCCCCCccccCCCchhHHHHHHHHHHHHHHhccCCCCC
Q 044022          156 FGAFLFELLAGRIHIWDLLKDTHDHGCFFNEYLKNYLEDKRFTGIPAPIIVQDIPCIEKEQQLHASAQLTLECVNNSPED  235 (241)
Q Consensus       156 ~G~~~~~~~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~cl~~~p~~  235 (241)
                      ||+++|+|++|..||.......       .. ..........   .. ..         ...+..+.+|+.+||+.||++
T Consensus       194 lG~il~~ll~g~~pf~~~~~~~-------~~-~~~~~~~~~~---~~-~~---------~~~~~~~~~li~~~L~~dP~~  252 (323)
T 3tki_A          194 CGIVLTAMLAGELPWDQPSDSC-------QE-YSDWKEKKTY---LN-PW---------KKIDSAPLALLHKILVENPSA  252 (323)
T ss_dssp             HHHHHHHHHHSSCSCSSSCTTS-------HH-HHHHHTTCTT---ST-TG---------GGSCHHHHHHHHHHSCSSTTT
T ss_pred             HHHHHHHHHhCCCCCCCCchHH-------HH-HHHHhccccc---CC-cc---------ccCCHHHHHHHHHHccCChhh
Confidence            9999999999999996522111       11 1111111100   00 00         122356789999999999999


Q ss_pred             CCCCCC
Q 044022          236 RPTMVD  241 (241)
Q Consensus       236 Rpt~~e  241 (241)
                      |||++|
T Consensus       253 R~t~~e  258 (323)
T 3tki_A          253 RITIPD  258 (323)
T ss_dssp             SCCHHH
T ss_pred             CcCHHH
Confidence            999853


No 30 
>2ivs_A Proto-oncogene tyrosine-protein kinase receptor RET; nucleotide-binding, hirschsprung disease, phosphorylation, disease mutation; HET: ACK; 2.00A {Homo sapiens} PDB: 2ivt_A* 2ivu_A* 2x2k_A* 2x2l_A* 2x2m_A* 2ivv_A*
Probab=100.00  E-value=9e-42  Score=276.41  Aligned_cols=215  Identities=23%  Similarity=0.345  Sum_probs=169.3

Q ss_pred             CcccccccccccHHHHHHHHHHHHhcCCCcccceeeeeeeCCcceEEEEecCCCCHHHhhcCCC----------------
Q 044022            1 MKFYGHEYHRHTYGSCINNITYAAQMSHNHILKRIGCCLQTPIPILVFQSVEYGTLRDCIFGAP----------------   64 (241)
Q Consensus         1 iK~~~~~~~~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~~~~~~~lv~e~~~~~sL~~~l~~~~----------------   64 (241)
                      ||++.........+.+.+|++++++++||||+++++++...+..++||||+++++|.+++....                
T Consensus        58 vK~~~~~~~~~~~~~~~~E~~~l~~l~hp~iv~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~  137 (314)
T 2ivs_A           58 VKMLKENASPSELRDLLSEFNVLKQVNHPHVIKLYGACSQDGPLLLIVEYAKYGSLRGFLRESRKVGPGYLGSGGSRNSS  137 (314)
T ss_dssp             EEECCTTCCHHHHHHHHHHHHHHTTCCCTTBCCEEEEECSSSSCEEEEECCTTCBHHHHHHHTTTSTTEEC---------
T ss_pred             EEeccCCCCHHHHHHHHHHHHHHhhCCCCceeeEEEEEecCCceEEEEeecCCCCHHHHHHHHhhccCCccccccccccc
Confidence            3555544444556789999999999999999999999999999999999999999999986431                


Q ss_pred             ---------c---hHHHHHHHHHHHhchhhcCCCCCceeccCCCCCeeecCCCCeEEeeccCceecCCCCcceeeccccc
Q 044022           65 ---------L---PRLKIASDIVNSLAYLHFGFPRPIVLRNFKTQNILFNEENVAKWFDFLLSISIPEGETHITTDRVIG  132 (241)
Q Consensus        65 ---------~---~~~~~~~~i~~~l~~lh~~~~~~ivh~dl~~~nil~~~~~~~~l~df~~~~~~~~~~~~~~~~~~~~  132 (241)
                               .   ....++.+++.||.|||   +.+++|+||||+||+++.++.++|+|||.+................+
T Consensus       138 ~~~~~~~~~~~~~~~~~i~~qi~~~l~~lH---~~~ivH~dikp~NIli~~~~~~kl~Dfg~~~~~~~~~~~~~~~~~~~  214 (314)
T 2ivs_A          138 SLDHPDERALTMGDLISFAWQISQGMQYLA---EMKLVHRDLAARNILVAEGRKMKISDFGLSRDVYEEDSYVKRSQGRI  214 (314)
T ss_dssp             -------CEECHHHHHHHHHHHHHHHHHHH---HTTEECCCCSGGGEEEETTTEEEECCCTTCEECTTTSCEECSSCCCS
T ss_pred             ccccccccCcCHHHHHHHHHHHHHHHHHHH---HCCCcccccchheEEEcCCCCEEEccccccccccccccceeccCCCC
Confidence                     1   36789999999999999   89999999999999999999999999999987655443333344457


Q ss_pred             CCCccCcccccccCCCcchhhHHHHHHHHHHHh-cCcccccccccCCCcccchHHHHHHHhhhcccCCCCCCccccCCCc
Q 044022          133 TRGYSAPEYISICVLNEKSNVFSFGAFLFELLA-GRIHIWDLLKDTHDHGCFFNEYLKNYLEDKRFTGIPAPIIVQDIPC  211 (241)
Q Consensus       133 ~~~~~aPE~~~~~~~~~~~Di~s~G~~~~~~~~-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  211 (241)
                      ++.|+|||.+.+..++.++||||||+++|+|++ |..||......         + ............     ...    
T Consensus       215 ~~~y~aPE~~~~~~~~~~~Di~slG~il~el~t~g~~p~~~~~~~---------~-~~~~~~~~~~~~-----~~~----  275 (314)
T 2ivs_A          215 PVKWMAIESLFDHIYTTQSDVWSFGVLLWEIVTLGGNPYPGIPPE---------R-LFNLLKTGHRME-----RPD----  275 (314)
T ss_dssp             CGGGCCHHHHHHCEECHHHHHHHHHHHHHHHHTTSCCSSTTCCGG---------G-HHHHHHTTCCCC-----CCT----
T ss_pred             cccccChhhhcCCCcCchhhHHHHHHHHHHHHhCCCCCCCCCCHH---------H-HHHHhhcCCcCC-----CCc----
Confidence            788999999998889999999999999999999 99999652211         1 111111121111     111    


Q ss_pred             hhHHHHHHHHHHHHHHhccCCCCCCCCCCC
Q 044022          212 IEKEQQLHASAQLTLECVNNSPEDRPTMVD  241 (241)
Q Consensus       212 ~~~~~~~~~~~~l~~~cl~~~p~~Rpt~~e  241 (241)
                          ..++.+.+++.+||+.||++|||++|
T Consensus       276 ----~~~~~~~~li~~~l~~dp~~Rps~~~  301 (314)
T 2ivs_A          276 ----NCSEEMYRLMLQCWKQEPDKRPVFAD  301 (314)
T ss_dssp             ----TCCHHHHHHHHHHTCSSGGGSCCHHH
T ss_pred             ----cCCHHHHHHHHHHccCChhhCcCHHH
Confidence                12257899999999999999999753


No 31 
>3kul_A Ephrin type-A receptor 8; ATP-binding, kinase, nucleotide-binding, transfera phosphorylation, transmembrane, tyrosine-protein kinase; HET: PTR; 2.15A {Homo sapiens}
Probab=100.00  E-value=2.1e-41  Score=275.97  Aligned_cols=215  Identities=22%  Similarity=0.326  Sum_probs=166.1

Q ss_pred             CcccccccccccHHHHHHHHHHHHhcCCCcccceeeeeeeCCcceEEEEecCCCCHHHhhcCCC--c---hHHHHHHHHH
Q 044022            1 MKFYGHEYHRHTYGSCINNITYAAQMSHNHILKRIGCCLQTPIPILVFQSVEYGTLRDCIFGAP--L---PRLKIASDIV   75 (241)
Q Consensus         1 iK~~~~~~~~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~~~~~~~lv~e~~~~~sL~~~l~~~~--~---~~~~~~~~i~   75 (241)
                      ||++.........+.|.+|+.++++++||||+++++++...+..++||||+++++|.+++....  .   ....++.+++
T Consensus        82 vK~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~i~~qi~  161 (325)
T 3kul_A           82 IKALKAGYTERQRRDFLSEASIMGQFDHPNIIRLEGVVTRGRLAMIVTEYMENGSLDTFLRTHDGQFTIMQLVGMLRGVG  161 (325)
T ss_dssp             EEEECTTCCHHHHHHHHHHHHHHTTCCCTTBCCEEEEECGGGCCEEEEECCTTCBHHHHHHTTTTCSCHHHHHHHHHHHH
T ss_pred             EEecCCCCCHHHHHHHHHHHHHHHhCCCCCCCcEEEEEEeCCccEEEeeCCCCCcHHHHHHhcccCCCHHHHHHHHHHHH
Confidence            3555544444566789999999999999999999999999999999999999999999996542  1   4678999999


Q ss_pred             HHhchhhcCCCCCceeccCCCCCeeecCCCCeEEeeccCceecCCCCcc-eeecccccCCCccCcccccccCCCcchhhH
Q 044022           76 NSLAYLHFGFPRPIVLRNFKTQNILFNEENVAKWFDFLLSISIPEGETH-ITTDRVIGTRGYSAPEYISICVLNEKSNVF  154 (241)
Q Consensus        76 ~~l~~lh~~~~~~ivh~dl~~~nil~~~~~~~~l~df~~~~~~~~~~~~-~~~~~~~~~~~~~aPE~~~~~~~~~~~Di~  154 (241)
                      .||.|||   +.+++||||||+|||++.++.++|+|||++......... .......+|+.|+|||++.+..++.++|||
T Consensus       162 ~~L~~LH---~~~ivH~Dlkp~NIll~~~~~~kl~Dfg~a~~~~~~~~~~~~~~~~~~t~~y~aPE~~~~~~~~~~~Di~  238 (325)
T 3kul_A          162 AGMRYLS---DLGYVHRDLAARNVLVDSNLVCKVSDFGLSRVLEDDPDAAYTTTGGKIPIRWTAPEAIAFRTFSSASDVW  238 (325)
T ss_dssp             HHHHHHH---HTTEECSCCSGGGEEECTTCCEEECCCSSCEECC----CCEECC---CCGGGSCHHHHHHCEECHHHHHH
T ss_pred             HHHHHHH---HCCeeCCCCCcceEEECCCCCEEECCCCcccccccCccceeeccCCCCcccccCHhHhcCCCCCcHHHHH
Confidence            9999999   899999999999999999999999999999876543221 122223456789999999988999999999


Q ss_pred             HHHHHHHHHHh-cCcccccccccCCCcccchHHHHHHHhhhcccCCCCCCccccCCCchhHHHHHHHHHHHHHHhccCCC
Q 044022          155 SFGAFLFELLA-GRIHIWDLLKDTHDHGCFFNEYLKNYLEDKRFTGIPAPIIVQDIPCIEKEQQLHASAQLTLECVNNSP  233 (241)
Q Consensus       155 s~G~~~~~~~~-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~cl~~~p  233 (241)
                      |||+++|+|++ |..||....         ..+......... ...     ...        ..+..+.+++.+||+.||
T Consensus       239 slG~il~ell~~g~~p~~~~~---------~~~~~~~~~~~~-~~~-----~~~--------~~~~~l~~li~~~l~~dp  295 (325)
T 3kul_A          239 SFGVVMWEVLAYGERPYWNMT---------NRDVISSVEEGY-RLP-----APM--------GCPHALHQLMLDCWHKDR  295 (325)
T ss_dssp             HHHHHHHHHHTTSCCTTTTSC---------HHHHHHHHHTTC-CCC-----CCT--------TCCHHHHHHHHHHTCSSG
T ss_pred             HHHHHHHHHHcCCCCCcccCC---------HHHHHHHHHcCC-CCC-----CCC--------CcCHHHHHHHHHHccCCh
Confidence            99999999999 999995521         112222221111 111     111        223578999999999999


Q ss_pred             CCCCCCCC
Q 044022          234 EDRPTMVD  241 (241)
Q Consensus       234 ~~Rpt~~e  241 (241)
                      ++|||+.|
T Consensus       296 ~~Rps~~e  303 (325)
T 3kul_A          296 AQRPRFSQ  303 (325)
T ss_dssp             GGSCCHHH
T ss_pred             hhCcCHHH
Confidence            99999753


No 32 
>3s95_A LIMK-1, LIM domain kinase 1; structural genomics, structural genomics consortium, SGC, PR kinase, transferase-antibiotic complex; HET: STU GOL; 1.65A {Homo sapiens}
Probab=100.00  E-value=3.5e-41  Score=272.78  Aligned_cols=208  Identities=27%  Similarity=0.384  Sum_probs=163.2

Q ss_pred             cccHHHHHHHHHHHHhcCCCcccceeeeeeeCCcceEEEEecCCCCHHHhhcCCC-----chHHHHHHHHHHHhchhhcC
Q 044022           10 RHTYGSCINNITYAAQMSHNHILKRIGCCLQTPIPILVFQSVEYGTLRDCIFGAP-----LPRLKIASDIVNSLAYLHFG   84 (241)
Q Consensus        10 ~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~~~~~~~lv~e~~~~~sL~~~l~~~~-----~~~~~~~~~i~~~l~~lh~~   84 (241)
                      ....+.|.+|++++++++||||+++++++...+..++||||+++++|.+++....     ..+..++.|++.||.|||  
T Consensus        48 ~~~~~~~~~E~~~l~~l~hp~iv~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~i~~qi~~al~~lH--  125 (310)
T 3s95_A           48 EETQRTFLKEVKVMRCLEHPNVLKFIGVLYKDKRLNFITEYIKGGTLRGIIKSMDSQYPWSQRVSFAKDIASGMAYLH--  125 (310)
T ss_dssp             HHHHHHHHHHHHHHTTCCCTTBCCEEEEEEETTEEEEEEECCTTCBHHHHHHHCCTTSCHHHHHHHHHHHHHHHHHHH--
T ss_pred             HHHHHHHHHHHHHHHhCCCcCcccEEEEEecCCeeEEEEEecCCCcHHHHHHhccCCCCHHHHHHHHHHHHHHHHHHH--
Confidence            3456789999999999999999999999999999999999999999999987532     146789999999999999  


Q ss_pred             CCCCceeccCCCCCeeecCCCCeEEeeccCceecCCCCccee------------ecccccCCCccCcccccccCCCcchh
Q 044022           85 FPRPIVLRNFKTQNILFNEENVAKWFDFLLSISIPEGETHIT------------TDRVIGTRGYSAPEYISICVLNEKSN  152 (241)
Q Consensus        85 ~~~~ivh~dl~~~nil~~~~~~~~l~df~~~~~~~~~~~~~~------------~~~~~~~~~~~aPE~~~~~~~~~~~D  152 (241)
                       +.+++||||||+||+++.++.+||+|||.+...........            .....||+.|+|||++.+..++.++|
T Consensus       126 -~~~ivH~dlkp~Nil~~~~~~~kl~Dfg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~D  204 (310)
T 3s95_A          126 -SMNIIHRDLNSHNCLVRENKNVVVADFGLARLMVDEKTQPEGLRSLKKPDRKKRYTVVGNPYWMAPEMINGRSYDEKVD  204 (310)
T ss_dssp             -HTTEECSCCSTTSEEECTTSCEEECCCTTCEECC--------------------CCCCSCGGGCCHHHHTTCCCCTHHH
T ss_pred             -hCCccCCCCCcCeEEECCCCCEEEeecccceecccccccccccccccccccccccccCCCcceeCHHHhcCCCCCcHHH
Confidence             89999999999999999999999999999987644322110            11456899999999999999999999


Q ss_pred             hHHHHHHHHHHHhcCcccccccccCCCcccchHHHHHHHhhhcccCCCCCCccccCCCchhHHHHHHHHHHHHHHhccCC
Q 044022          153 VFSFGAFLFELLAGRIHIWDLLKDTHDHGCFFNEYLKNYLEDKRFTGIPAPIIVQDIPCIEKEQQLHASAQLTLECVNNS  232 (241)
Q Consensus       153 i~s~G~~~~~~~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~cl~~~  232 (241)
                      |||||+++|+|++|..|+.....................             ....        .+..+.+++.+||+.|
T Consensus       205 i~slG~~l~el~~g~~~~~~~~~~~~~~~~~~~~~~~~~-------------~~~~--------~~~~l~~li~~~l~~d  263 (310)
T 3s95_A          205 VFSFGIVLCEIIGRVNADPDYLPRTMDFGLNVRGFLDRY-------------CPPN--------CPPSFFPITVRCCDLD  263 (310)
T ss_dssp             HHHHHHHHHHHHHTCCSSTTTSCBCTTSSBCHHHHHHHT-------------CCTT--------CCTTHHHHHHHHTCSS
T ss_pred             HHHHHHHHHHHhcCCCCCcchhhhHHHHhhhhhcccccc-------------CCCC--------CCHHHHHHHHHHccCC
Confidence            999999999999999998653322221221211111111             0011        1145889999999999


Q ss_pred             CCCCCCCCC
Q 044022          233 PEDRPTMVD  241 (241)
Q Consensus       233 p~~Rpt~~e  241 (241)
                      |++|||++|
T Consensus       264 P~~Rps~~~  272 (310)
T 3s95_A          264 PEKRPSFVK  272 (310)
T ss_dssp             GGGSCCHHH
T ss_pred             hhhCcCHHH
Confidence            999999753


No 33 
>2yab_A Death-associated protein kinase 2; apoptosis, transferase; HET: AMP; 1.90A {Mus musculus} PDB: 2yaa_A* 2ya9_A*
Probab=100.00  E-value=6.6e-41  Score=276.49  Aligned_cols=204  Identities=20%  Similarity=0.261  Sum_probs=163.5

Q ss_pred             cHHHHHHHHHHHHhcCCCcccceeeeeeeCCcceEEEEecCCCCHHHhhcCCCc----hHHHHHHHHHHHhchhhcCCCC
Q 044022           12 TYGSCINNITYAAQMSHNHILKRIGCCLQTPIPILVFQSVEYGTLRDCIFGAPL----PRLKIASDIVNSLAYLHFGFPR   87 (241)
Q Consensus        12 ~~~~~~~e~~~l~~l~h~~iv~~~~~~~~~~~~~lv~e~~~~~sL~~~l~~~~~----~~~~~~~~i~~~l~~lh~~~~~   87 (241)
                      ..+.+.+|+.++++++||||+++++++...+..++||||+++|+|.+++.....    ....++.||+.||.|||   +.
T Consensus        58 ~~~~~~~E~~il~~l~hpnIv~l~~~~~~~~~~~lv~e~~~gg~L~~~l~~~~~l~~~~~~~i~~qi~~aL~~LH---~~  134 (361)
T 2yab_A           58 CREEIEREVSILRQVLHPNIITLHDVYENRTDVVLILELVSGGELFDFLAQKESLSEEEATSFIKQILDGVNYLH---TK  134 (361)
T ss_dssp             CHHHHHHHHHHHTTCCCTTBCCEEEEEECSSEEEEEEECCCSCBHHHHHTTCSCCBHHHHHHHHHHHHHHHHHHH---HT
T ss_pred             HHHHHHHHHHHHHhCCCcCCCcEEEEEEeCCEEEEEEEcCCCCcHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHH---HC
Confidence            357899999999999999999999999999999999999999999999976532    46789999999999999   89


Q ss_pred             CceeccCCCCCeeecCCC----CeEEeeccCceecCCCCcceeecccccCCCccCcccccccCCCcchhhHHHHHHHHHH
Q 044022           88 PIVLRNFKTQNILFNEEN----VAKWFDFLLSISIPEGETHITTDRVIGTRGYSAPEYISICVLNEKSNVFSFGAFLFEL  163 (241)
Q Consensus        88 ~ivh~dl~~~nil~~~~~----~~~l~df~~~~~~~~~~~~~~~~~~~~~~~~~aPE~~~~~~~~~~~Di~s~G~~~~~~  163 (241)
                      +++||||||+||+++.++    .+||+|||++........   .....||+.|+|||++.+..++.++||||||+++|+|
T Consensus       135 givHrDlkp~NIll~~~~~~~~~vkl~DFG~a~~~~~~~~---~~~~~gt~~y~aPE~~~~~~~~~~~DiwslGvil~~l  211 (361)
T 2yab_A          135 KIAHFDLKPENIMLLDKNIPIPHIKLIDFGLAHEIEDGVE---FKNIFGTPEFVAPEIVNYEPLGLEADMWSIGVITYIL  211 (361)
T ss_dssp             TEECCCCSGGGEEESCTTSSSCCEEECCCSSCEECCTTCC---CCCCCSCGGGCCHHHHTTCCCCTHHHHHHHHHHHHHH
T ss_pred             CcccCCCCHHHEEEeCCCCCccCEEEEecCCceEcCCCCc---cccCCCCccEECchHHcCCCCCccccHHHHHHHHHHH
Confidence            999999999999998877    799999999987654322   1335689999999999988999999999999999999


Q ss_pred             HhcCcccccccccCCCcccchHHHHHHHhhhcccCCCCCCccccCCCchhHHHHHHHHHHHHHHhccCCCCCCCCCCC
Q 044022          164 LAGRIHIWDLLKDTHDHGCFFNEYLKNYLEDKRFTGIPAPIIVQDIPCIEKEQQLHASAQLTLECVNNSPEDRPTMVD  241 (241)
Q Consensus       164 ~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~cl~~~p~~Rpt~~e  241 (241)
                      ++|..||...         ...+....... ... . ..+..        ....+..+.+|+.+||..||++|||++|
T Consensus       212 l~g~~Pf~~~---------~~~~~~~~i~~-~~~-~-~~~~~--------~~~~s~~~~~li~~~L~~dP~~R~t~~e  269 (361)
T 2yab_A          212 LSGASPFLGD---------TKQETLANITA-VSY-D-FDEEF--------FSQTSELAKDFIRKLLVKETRKRLTIQE  269 (361)
T ss_dssp             HHSCCSSCCS---------SHHHHHHHHHT-TCC-C-CCHHH--------HTTSCHHHHHHHHHHSCSSTTTSCCHHH
T ss_pred             HhCCCCCCCC---------CHHHHHHHHHh-cCC-C-CCchh--------ccCCCHHHHHHHHHHCCCChhHCcCHHH
Confidence            9999999552         11122222211 110 0 00000        1122367889999999999999999853


No 34 
>3tt0_A Basic fibroblast growth factor receptor 1; kinase domain, transferase, transferase-transferase inhibito; HET: 07J; 2.80A {Homo sapiens}
Probab=100.00  E-value=4.7e-41  Score=279.66  Aligned_cols=215  Identities=20%  Similarity=0.318  Sum_probs=169.9

Q ss_pred             CcccccccccccHHHHHHHHHHHHhc-CCCcccceeeeeeeCCcceEEEEecCCCCHHHhhcCCC---------------
Q 044022            1 MKFYGHEYHRHTYGSCINNITYAAQM-SHNHILKRIGCCLQTPIPILVFQSVEYGTLRDCIFGAP---------------   64 (241)
Q Consensus         1 iK~~~~~~~~~~~~~~~~e~~~l~~l-~h~~iv~~~~~~~~~~~~~lv~e~~~~~sL~~~l~~~~---------------   64 (241)
                      ||++..........++.+|+++++++ +||||+++++++...+..++||||+++|+|.+++....               
T Consensus       106 vK~~~~~~~~~~~~~~~~E~~~l~~l~~hpnIv~~~~~~~~~~~~~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~  185 (382)
T 3tt0_A          106 VKMLKSDATEKDLSDLISEMEMMKMIGKHKNIINLLGACTQDGPLYVIVEYASKGNLREYLQARRPPGLEYSYNPSHNPE  185 (382)
T ss_dssp             EEEECTTCCHHHHHHHHHHHHHHHHHCCCTTBCCEEEEECSSSSCEEEEECCTTCBHHHHHHHTCCSSSSSCCCCCSSCC
T ss_pred             EEeeccccCHHHHHHHHHHHHHHHHhcCCchhhhheeeeccCCceEEEEEecCCCcHHHHHHHhcccccccccccccccc
Confidence            35555544445567899999999999 99999999999999999999999999999999986432               


Q ss_pred             --c---hHHHHHHHHHHHhchhhcCCCCCceeccCCCCCeeecCCCCeEEeeccCceecCCCCcceeecccccCCCccCc
Q 044022           65 --L---PRLKIASDIVNSLAYLHFGFPRPIVLRNFKTQNILFNEENVAKWFDFLLSISIPEGETHITTDRVIGTRGYSAP  139 (241)
Q Consensus        65 --~---~~~~~~~~i~~~l~~lh~~~~~~ivh~dl~~~nil~~~~~~~~l~df~~~~~~~~~~~~~~~~~~~~~~~~~aP  139 (241)
                        .   .++.++.+++.||.|||   +.+++||||||+|||++.++.+||+|||++................+++.|+||
T Consensus       186 ~~l~~~~~~~i~~qi~~aL~~LH---~~~ivH~Dlkp~NIll~~~~~~kL~DFG~a~~~~~~~~~~~~~~~~~t~~y~aP  262 (382)
T 3tt0_A          186 EQLSSKDLVSCAYQVARGMEYLA---SKKCIHRDLAARNVLVTEDNVMKIADFGLARDIHHIDYYKKTTNGRLPVKWMAP  262 (382)
T ss_dssp             CCCCHHHHHHHHHHHHHHHHHHH---HTTCCCSCCCGGGEEECTTCCEEECSCSCCCCSSCCCTTCCCTTCCCGGGGSCH
T ss_pred             cccCHHHHHHHHHHHHHHHHHHH---hCCEecCCCCcceEEEcCCCcEEEcccCcccccccccccccccCCCCCcceeCH
Confidence              1   46789999999999999   899999999999999999999999999999866544332333444577889999


Q ss_pred             ccccccCCCcchhhHHHHHHHHHHHh-cCcccccccccCCCcccchHHHHHHHhhhcccCCCCCCccccCCCchhHHHHH
Q 044022          140 EYISICVLNEKSNVFSFGAFLFELLA-GRIHIWDLLKDTHDHGCFFNEYLKNYLEDKRFTGIPAPIIVQDIPCIEKEQQL  218 (241)
Q Consensus       140 E~~~~~~~~~~~Di~s~G~~~~~~~~-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  218 (241)
                      |++.+..++.++||||||+++|+|++ |..||...         ...+..... ..+.....     ...        .+
T Consensus       263 E~~~~~~~~~~~DiwslG~il~ellt~g~~p~~~~---------~~~~~~~~~-~~~~~~~~-----~~~--------~~  319 (382)
T 3tt0_A          263 EALFDRIYTHQSDVWSFGVLLWEIFTLGGSPYPGV---------PVEELFKLL-KEGHRMDK-----PSN--------CT  319 (382)
T ss_dssp             HHHHSCCCCHHHHHHHHHHHHHHHHTTSCCSSTTC---------CHHHHHHHH-HTTCCCCC-----CSS--------CC
T ss_pred             HHhcCCCCCchhHHHHHHHHHHHHHhCCCCCCCCC---------CHHHHHHHH-HcCCCCCC-----Ccc--------CC
Confidence            99999899999999999999999999 99998542         112222222 22211111     111        22


Q ss_pred             HHHHHHHHHhccCCCCCCCCCCC
Q 044022          219 HASAQLTLECVNNSPEDRPTMVD  241 (241)
Q Consensus       219 ~~~~~l~~~cl~~~p~~Rpt~~e  241 (241)
                      ..+.+++.+||+.||++|||++|
T Consensus       320 ~~l~~li~~~l~~dP~~Rps~~e  342 (382)
T 3tt0_A          320 NELYMMMRDCWHAVPSQRPTFKQ  342 (382)
T ss_dssp             HHHHHHHHHHTCSSGGGSCCHHH
T ss_pred             HHHHHHHHHHcCCChhhCcCHHH
Confidence            57899999999999999999853


No 35 
>3vhe_A Vascular endothelial growth factor receptor 2; kinase domain, kinase, transferase-transferase inhibitor COM; HET: 42Q; 1.55A {Homo sapiens} PDB: 1y6a_A* 1y6b_A* 3vhk_A* 3vid_A* 3hng_A*
Probab=100.00  E-value=1e-41  Score=281.06  Aligned_cols=216  Identities=20%  Similarity=0.329  Sum_probs=167.3

Q ss_pred             CcccccccccccHHHHHHHHHHHHhc-CCCcccceeeeeeeCC-cceEEEEecCCCCHHHhhcCCC--------------
Q 044022            1 MKFYGHEYHRHTYGSCINNITYAAQM-SHNHILKRIGCCLQTP-IPILVFQSVEYGTLRDCIFGAP--------------   64 (241)
Q Consensus         1 iK~~~~~~~~~~~~~~~~e~~~l~~l-~h~~iv~~~~~~~~~~-~~~lv~e~~~~~sL~~~l~~~~--------------   64 (241)
                      ||++.........+.+.+|+++++++ +||||+++++++...+ ..++||||+++|+|.+++....              
T Consensus        57 vK~~~~~~~~~~~~~~~~E~~~l~~l~~hpniv~~~~~~~~~~~~~~iv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~  136 (359)
T 3vhe_A           57 VKMLKEGATHSEHRALMSELKILIHIGHHLNVVNLLGACTKPGGPLMVIVEFCKFGNLSTYLRSKRNEFVPYKTKGARFR  136 (359)
T ss_dssp             EEEECTTCCHHHHHHHHHHHHHHHHHCCCTTBCCEEEEECSTTSCCEEEEECCTTEEHHHHHHTTTTSBCSCC-------
T ss_pred             EEEecCcCCHHHHHHHHHHHHHHHhhcCCcceeeeeeeeecCCCceEEEEEecCCCcHHHHHHhccccccccccccchhh
Confidence            35555444444567899999999999 7899999999998755 4899999999999999986532              


Q ss_pred             -----------------------------------------------------c---hHHHHHHHHHHHhchhhcCCCCC
Q 044022           65 -----------------------------------------------------L---PRLKIASDIVNSLAYLHFGFPRP   88 (241)
Q Consensus        65 -----------------------------------------------------~---~~~~~~~~i~~~l~~lh~~~~~~   88 (241)
                                                                           .   ....++.+++.||.|||   +.+
T Consensus       137 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~ql~~aL~~LH---~~~  213 (359)
T 3vhe_A          137 QGKDYVGAIPVDLKRRLDSITSSQSSASSGFVEEKSLSDVEEEEAPEDLYKDFLTLEHLICYSFQVAKGMEFLA---SRK  213 (359)
T ss_dssp             -----------------------------------------------CTTTTCBCHHHHHHHHHHHHHHHHHHH---HTT
T ss_pred             cccccccccchhhhccccccCccccccccccccccccchhhhcccccchhccccCHHHHHHHHHHHHHHHHHHH---HCC
Confidence                                                                 1   25678999999999999   899


Q ss_pred             ceeccCCCCCeeecCCCCeEEeeccCceecCCCCcceeecccccCCCccCcccccccCCCcchhhHHHHHHHHHHHh-cC
Q 044022           89 IVLRNFKTQNILFNEENVAKWFDFLLSISIPEGETHITTDRVIGTRGYSAPEYISICVLNEKSNVFSFGAFLFELLA-GR  167 (241)
Q Consensus        89 ivh~dl~~~nil~~~~~~~~l~df~~~~~~~~~~~~~~~~~~~~~~~~~aPE~~~~~~~~~~~Di~s~G~~~~~~~~-g~  167 (241)
                      ++||||||+|||++.++.++|+|||++................+|+.|+|||++.+..++.++||||||+++|+|++ |.
T Consensus       214 ivH~Dikp~NIll~~~~~~kl~Dfg~a~~~~~~~~~~~~~~~~~t~~y~aPE~~~~~~~~~~~Di~slG~il~ellt~g~  293 (359)
T 3vhe_A          214 CIHRDLAARNILLSEKNVVKICDFGLARDIYKDPDYVRKGDARLPLKWMAPETIFDRVYTIQSDVWSFGVLLWEIFSLGA  293 (359)
T ss_dssp             CCCSCCSGGGEEECGGGCEEECCCGGGSCTTSCTTCEEC--CEECGGGCCHHHHHHCCCCHHHHHHHHHHHHHHHTTTSC
T ss_pred             cccCCCChhhEEEcCCCcEEEEeccceeeecccccchhccccCCCceeEChhhhcCCCCCchhhhhhHHHHHHHHHhcCC
Confidence            99999999999999999999999999987655444344445668889999999998899999999999999999998 99


Q ss_pred             cccccccccCCCcccchHHHHHHHhhhcccCCCCCCccccCCCchhHHHHHHHHHHHHHHhccCCCCCCCCCCC
Q 044022          168 IHIWDLLKDTHDHGCFFNEYLKNYLEDKRFTGIPAPIIVQDIPCIEKEQQLHASAQLTLECVNNSPEDRPTMVD  241 (241)
Q Consensus       168 ~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~cl~~~p~~Rpt~~e  241 (241)
                      .||.....         .+........+.....+     ..        .++.+.+++.+||+.||++|||++|
T Consensus       294 ~p~~~~~~---------~~~~~~~~~~~~~~~~~-----~~--------~~~~l~~li~~~l~~dP~~Rps~~e  345 (359)
T 3vhe_A          294 SPYPGVKI---------DEEFCRRLKEGTRMRAP-----DY--------TTPEMYQTMLDCWHGEPSQRPTFSE  345 (359)
T ss_dssp             CSSTTCCC---------SHHHHHHHHHTCCCCCC-----TT--------CCHHHHHHHHHHTCSSGGGSCCHHH
T ss_pred             CCCCccch---------hHHHHHHHHcCCCCCCC-----CC--------CCHHHHHHHHHHccCChhhCCCHHH
Confidence            99954211         11112222222111111     11        2257889999999999999999853


No 36 
>1rjb_A FL cytokine receptor; kinase, structure, autoinhibition, juxtamembrane domain, transferase; 2.10A {Homo sapiens} SCOP: d.144.1.7
Probab=100.00  E-value=1.1e-41  Score=279.39  Aligned_cols=216  Identities=19%  Similarity=0.273  Sum_probs=167.0

Q ss_pred             CcccccccccccHHHHHHHHHHHHhc-CCCcccceeeeeeeCCcceEEEEecCCCCHHHhhcCCC---------------
Q 044022            1 MKFYGHEYHRHTYGSCINNITYAAQM-SHNHILKRIGCCLQTPIPILVFQSVEYGTLRDCIFGAP---------------   64 (241)
Q Consensus         1 iK~~~~~~~~~~~~~~~~e~~~l~~l-~h~~iv~~~~~~~~~~~~~lv~e~~~~~sL~~~l~~~~---------------   64 (241)
                      ||++.........+.+.+|+.+++++ +||||+++++++...+..++||||+++|+|.+++....               
T Consensus        80 vK~~~~~~~~~~~~~~~~E~~~l~~l~~hp~iv~~~~~~~~~~~~~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~  159 (344)
T 1rjb_A           80 VKMLKEKADSSEREALMSELKMMTQLGSHENIVNLLGACTLSGPIYLIFEYCCYGDLLNYLRSKREKFSEDEIEYENQKR  159 (344)
T ss_dssp             EEEECC------CHHHHHHHHHHHHHCCCTTBCCEEEEECSSSSCEEEEECCTTCBHHHHHHTTTTCC------------
T ss_pred             EEecccccCHHHHHHHHHHHHHHHhhcCCCCeeeEEEEEeeCCccEEEEecCCCCcHHHHHhhccccccccccchhhhcc
Confidence            35555444445667899999999999 99999999999999999999999999999999986542               


Q ss_pred             ------------chHHHHHHHHHHHhchhhcCCCCCceeccCCCCCeeecCCCCeEEeeccCceecCCCCcceeeccccc
Q 044022           65 ------------LPRLKIASDIVNSLAYLHFGFPRPIVLRNFKTQNILFNEENVAKWFDFLLSISIPEGETHITTDRVIG  132 (241)
Q Consensus        65 ------------~~~~~~~~~i~~~l~~lh~~~~~~ivh~dl~~~nil~~~~~~~~l~df~~~~~~~~~~~~~~~~~~~~  132 (241)
                                  ...+.++.+++.||.|||   +.+++||||||+||+++.++.++|+|||.+................+
T Consensus       160 ~~~~~~~~~l~~~~~~~i~~qi~~aL~~LH---~~~ivH~Dikp~NIll~~~~~~kL~Dfg~~~~~~~~~~~~~~~~~~~  236 (344)
T 1rjb_A          160 LEEEEDLNVLTFEDLLCFAYQVAKGMEFLE---FKSCVHRDLAARNVLVTHGKVVKICDFGLARDIMSDSNYVVRGNARL  236 (344)
T ss_dssp             ---------CCHHHHHHHHHHHHHHHHHHH---HTTEEETTCSGGGEEEETTTEEEECCCGGGSCGGGCTTSEEETTEEE
T ss_pred             cccccccccCCHHHHHHHHHHHHHHHHHHH---hCCcccCCCChhhEEEcCCCcEEeCCCccCcccccCccceeccCccC
Confidence                        135679999999999999   89999999999999999999999999999976654443333445567


Q ss_pred             CCCccCcccccccCCCcchhhHHHHHHHHHHHh-cCcccccccccCCCcccchHHHHHHHhhhcccCCCCCCccccCCCc
Q 044022          133 TRGYSAPEYISICVLNEKSNVFSFGAFLFELLA-GRIHIWDLLKDTHDHGCFFNEYLKNYLEDKRFTGIPAPIIVQDIPC  211 (241)
Q Consensus       133 ~~~~~aPE~~~~~~~~~~~Di~s~G~~~~~~~~-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  211 (241)
                      |+.|+|||.+.+..++.++||||||+++|+|++ |..||......         .........+....     ....   
T Consensus       237 t~~y~aPE~~~~~~~~~~~Di~slG~il~el~t~g~~p~~~~~~~---------~~~~~~~~~~~~~~-----~~~~---  299 (344)
T 1rjb_A          237 PVKWMAPESLFEGIYTIKSDVWSYGILLWEIFSLGVNPYPGIPVD---------ANFYKLIQNGFKMD-----QPFY---  299 (344)
T ss_dssp             CGGGCCHHHHHHCCCCHHHHHHHHHHHHHHHTTTSCCSSTTCCCS---------HHHHHHHHTTCCCC-----CCTT---
T ss_pred             ccCccCHHHhccCCCChhHhHHHHHHHHHHHHcCCCCCcccCCcH---------HHHHHHHhcCCCCC-----CCCC---
Confidence            888999999998899999999999999999998 99999652211         11111111111111     1111   


Q ss_pred             hhHHHHHHHHHHHHHHhccCCCCCCCCCCC
Q 044022          212 IEKEQQLHASAQLTLECVNNSPEDRPTMVD  241 (241)
Q Consensus       212 ~~~~~~~~~~~~l~~~cl~~~p~~Rpt~~e  241 (241)
                           .++.+.+++.+||+.||++|||++|
T Consensus       300 -----~~~~l~~li~~~l~~dp~~Rps~~~  324 (344)
T 1rjb_A          300 -----ATEEIYIIMQSCWAFDSRKRPSFPN  324 (344)
T ss_dssp             -----CCHHHHHHHHHHTCSSGGGSCCHHH
T ss_pred             -----CCHHHHHHHHHHcCCCchhCcCHHH
Confidence                 2257899999999999999999753


No 37 
>1luf_A Muscle-specific tyrosine kinase receptor MUSK; phosphorylation, signal transduction, MASS spectrometry, transferase; 2.05A {Rattus norvegicus} SCOP: d.144.1.7
Probab=100.00  E-value=1.1e-41  Score=279.09  Aligned_cols=215  Identities=23%  Similarity=0.337  Sum_probs=167.4

Q ss_pred             CcccccccccccHHHHHHHHHHHHhcCCCcccceeeeeeeCCcceEEEEecCCCCHHHhhcCCC----------------
Q 044022            1 MKFYGHEYHRHTYGSCINNITYAAQMSHNHILKRIGCCLQTPIPILVFQSVEYGTLRDCIFGAP----------------   64 (241)
Q Consensus         1 iK~~~~~~~~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~~~~~~~lv~e~~~~~sL~~~l~~~~----------------   64 (241)
                      ||++..+......+.+.+|++++++++||||+++++++...+..++||||+++++|.+++....                
T Consensus        82 vK~~~~~~~~~~~~~~~~E~~~l~~l~hp~iv~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~  161 (343)
T 1luf_A           82 VKMLKEEASADMQADFQREAALMAEFDNPNIVKLLGVCAVGKPMCLLFEYMAYGDLNEFLRSMSPHTVCSLSHSDLSTRA  161 (343)
T ss_dssp             EEECCTTCCHHHHHHHHHHHHHHHTCCCTTBCCEEEEECSSSSCEEEEECCTTCBHHHHHHHTCC---------------
T ss_pred             EEEeccccCHHHHHHHHHHHHHHHhCCCCCEEEEEEEEccCCceEEEEecCCCCcHHHHHHHhCcccccccccccccccc
Confidence            3555554444556789999999999999999999999999999999999999999999986521                


Q ss_pred             ---------c---hHHHHHHHHHHHhchhhcCCCCCceeccCCCCCeeecCCCCeEEeeccCceecCCCCcceeeccccc
Q 044022           65 ---------L---PRLKIASDIVNSLAYLHFGFPRPIVLRNFKTQNILFNEENVAKWFDFLLSISIPEGETHITTDRVIG  132 (241)
Q Consensus        65 ---------~---~~~~~~~~i~~~l~~lh~~~~~~ivh~dl~~~nil~~~~~~~~l~df~~~~~~~~~~~~~~~~~~~~  132 (241)
                               .   .++.++.+++.||.|||   +++++||||||+||+++.++.+||+|||.+................+
T Consensus       162 ~~~~~~~~~l~~~~~~~i~~qi~~~l~~LH---~~~ivH~Dlkp~NIl~~~~~~~kl~Dfg~~~~~~~~~~~~~~~~~~~  238 (343)
T 1luf_A          162 RVSSPGPPPLSCAEQLCIARQVAAGMAYLS---ERKFVHRDLATRNCLVGENMVVKIADFGLSRNIYSADYYKADGNDAI  238 (343)
T ss_dssp             -------CCCCHHHHHHHHHHHHHHHHHHH---HTTCCCSCCSGGGEEECGGGCEEECCCSCHHHHTGGGCBC----CCB
T ss_pred             cccccCCCCCCHHHHHHHHHHHHHHHHHHH---hCCeecCCCCcceEEECCCCeEEEeecCCCcccccCccccccCCCcc
Confidence                     1   35779999999999999   89999999999999999999999999999876543322222234467


Q ss_pred             CCCccCcccccccCCCcchhhHHHHHHHHHHHh-cCcccccccccCCCcccchHHHHHHHhhhcccCCCCCCccccCCCc
Q 044022          133 TRGYSAPEYISICVLNEKSNVFSFGAFLFELLA-GRIHIWDLLKDTHDHGCFFNEYLKNYLEDKRFTGIPAPIIVQDIPC  211 (241)
Q Consensus       133 ~~~~~aPE~~~~~~~~~~~Di~s~G~~~~~~~~-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  211 (241)
                      ++.|+|||.+.+..++.++||||||+++|+|++ |..||....         ..+..... ..+.....     ...   
T Consensus       239 t~~y~aPE~~~~~~~~~~~Di~slG~il~el~t~g~~p~~~~~---------~~~~~~~~-~~~~~~~~-----~~~---  300 (343)
T 1luf_A          239 PIRWMPPESIFYNRYTTESDVWAYGVVLWEIFSYGLQPYYGMA---------HEEVIYYV-RDGNILAC-----PEN---  300 (343)
T ss_dssp             CGGGCCHHHHHHCCCCHHHHHHHHHHHHHHHHTTTCCTTTTSC---------HHHHHHHH-HTTCCCCC-----CTT---
T ss_pred             cceecChhhhccCCcCcccccHHHHHHHHHHHhcCCCcCCCCC---------hHHHHHHH-hCCCcCCC-----CCC---
Confidence            889999999998899999999999999999999 999996521         11222222 12211111     111   


Q ss_pred             hhHHHHHHHHHHHHHHhccCCCCCCCCCCC
Q 044022          212 IEKEQQLHASAQLTLECVNNSPEDRPTMVD  241 (241)
Q Consensus       212 ~~~~~~~~~~~~l~~~cl~~~p~~Rpt~~e  241 (241)
                           .+..+.+++.+||+.||++|||+.|
T Consensus       301 -----~~~~l~~li~~~l~~~p~~Rps~~~  325 (343)
T 1luf_A          301 -----CPLELYNLMRLCWSKLPADRPSFCS  325 (343)
T ss_dssp             -----CCHHHHHHHHHHTCSSGGGSCCHHH
T ss_pred             -----CCHHHHHHHHHHcccCcccCCCHHH
Confidence                 2257899999999999999999753


No 38 
>2c30_A Serine/threonine-protein kinase PAK 6; CRIB domain, ATP-binding, transferase, nucleotide-binding; HET: SEP; 1.6A {Homo sapiens} PDB: 2f57_A* 2j0i_A* 2cdz_A* 2q0n_A* 2x4z_A* 2bva_A*
Probab=100.00  E-value=1.3e-40  Score=270.90  Aligned_cols=214  Identities=17%  Similarity=0.268  Sum_probs=168.5

Q ss_pred             CcccccccccccHHHHHHHHHHHHhcCCCcccceeeeeeeCCcceEEEEecCCCCHHHhhcCCCc---hHHHHHHHHHHH
Q 044022            1 MKFYGHEYHRHTYGSCINNITYAAQMSHNHILKRIGCCLQTPIPILVFQSVEYGTLRDCIFGAPL---PRLKIASDIVNS   77 (241)
Q Consensus         1 iK~~~~~~~~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~~~~~~~lv~e~~~~~sL~~~l~~~~~---~~~~~~~~i~~~   77 (241)
                      ||++.... ....+.+.+|+.++++++||||+++++++...+..++||||+++++|.+++.....   ....++.+++.|
T Consensus        75 vK~~~~~~-~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~~l~~~~~~~i~~qi~~~  153 (321)
T 2c30_A           75 VKMMDLRK-QQRRELLFNEVVIMRDYQHFNVVEMYKSYLVGEELWVLMEFLQGGALTDIVSQVRLNEEQIATVCEAVLQA  153 (321)
T ss_dssp             EEEEETTT-CCSHHHHHHHHHHHTTCCCTTBCCEEEEEEETTEEEEEECCCCSCBHHHHHTTCCCCHHHHHHHHHHHHHH
T ss_pred             EEEEeccc-hhHHHHHHHHHHHHHhCCCCCcceEEEEEEECCEEEEEEecCCCCCHHHHHHhcCCCHHHHHHHHHHHHHH
Confidence            35554322 34567799999999999999999999999999999999999999999999876543   467899999999


Q ss_pred             hchhhcCCCCCceeccCCCCCeeecCCCCeEEeeccCceecCCCCcceeecccccCCCccCcccccccCCCcchhhHHHH
Q 044022           78 LAYLHFGFPRPIVLRNFKTQNILFNEENVAKWFDFLLSISIPEGETHITTDRVIGTRGYSAPEYISICVLNEKSNVFSFG  157 (241)
Q Consensus        78 l~~lh~~~~~~ivh~dl~~~nil~~~~~~~~l~df~~~~~~~~~~~~~~~~~~~~~~~~~aPE~~~~~~~~~~~Di~s~G  157 (241)
                      |.|||   +.+++||||||+||+++.++.+||+|||++.........  .....||+.|+|||++.+..++.++||||||
T Consensus       154 L~~LH---~~~ivH~Dlkp~NIll~~~~~~kl~Dfg~~~~~~~~~~~--~~~~~gt~~y~aPE~~~~~~~~~~~Dv~slG  228 (321)
T 2c30_A          154 LAYLH---AQGVIHRDIKSDSILLTLDGRVKLSDFGFCAQISKDVPK--RKSLVGTPYWMAPEVISRSLYATEVDIWSLG  228 (321)
T ss_dssp             HHHHH---HTTEECCCCSGGGEEECTTCCEEECCCTTCEECCSSSCC--BCCCCSCGGGCCHHHHTTCCBCTHHHHHHHH
T ss_pred             HHHHH---HCCeecCCCCHHHEEECCCCcEEEeeeeeeeecccCccc--cccccCCccccCHhhhcCCCCCchhhHHHHH
Confidence            99999   899999999999999999999999999998876543221  2345789999999999988999999999999


Q ss_pred             HHHHHHHhcCcccccccccCCCcccchHHHHHHHhhhcccCCCCCCccccCCCchhHHHHHHHHHHHHHHhccCCCCCCC
Q 044022          158 AFLFELLAGRIHIWDLLKDTHDHGCFFNEYLKNYLEDKRFTGIPAPIIVQDIPCIEKEQQLHASAQLTLECVNNSPEDRP  237 (241)
Q Consensus       158 ~~~~~~~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~cl~~~p~~Rp  237 (241)
                      +++|+|++|+.||....         ..+....... ........   ..        ..+..+.+++.+||+.||++||
T Consensus       229 ~il~el~~g~~pf~~~~---------~~~~~~~~~~-~~~~~~~~---~~--------~~~~~l~~li~~~l~~dp~~Rp  287 (321)
T 2c30_A          229 IMVIEMVDGEPPYFSDS---------PVQAMKRLRD-SPPPKLKN---SH--------KVSPVLRDFLERMLVRDPQERA  287 (321)
T ss_dssp             HHHHHHHHSSCTTTTSC---------HHHHHHHHHH-SSCCCCTT---GG--------GSCHHHHHHHHHHSCSSTTTSC
T ss_pred             HHHHHHHhCCCCCCCCC---------HHHHHHHHhc-CCCCCcCc---cc--------cCCHHHHHHHHHHccCChhhCc
Confidence            99999999999996421         1111222111 11111100   01        2235788999999999999999


Q ss_pred             CCCC
Q 044022          238 TMVD  241 (241)
Q Consensus       238 t~~e  241 (241)
                      |++|
T Consensus       288 s~~e  291 (321)
T 2c30_A          288 TAQE  291 (321)
T ss_dssp             CHHH
T ss_pred             CHHH
Confidence            9853


No 39 
>3soa_A Calcium/calmodulin-dependent protein kinase type alpha with A beta 7 linker; phosphorylation, cytosolic, transferase-transferase inhibitor complex; HET: DB8; 3.55A {Homo sapiens}
Probab=100.00  E-value=8.3e-41  Score=282.65  Aligned_cols=206  Identities=19%  Similarity=0.270  Sum_probs=163.4

Q ss_pred             ccHHHHHHHHHHHHhcCCCcccceeeeeeeCCcceEEEEecCCCCHHHhhcCCCc----hHHHHHHHHHHHhchhhcCCC
Q 044022           11 HTYGSCINNITYAAQMSHNHILKRIGCCLQTPIPILVFQSVEYGTLRDCIFGAPL----PRLKIASDIVNSLAYLHFGFP   86 (241)
Q Consensus        11 ~~~~~~~~e~~~l~~l~h~~iv~~~~~~~~~~~~~lv~e~~~~~sL~~~l~~~~~----~~~~~~~~i~~~l~~lh~~~~   86 (241)
                      ...+.+.+|++++++++||||+++++++...+..++||||+++|+|.+.+.....    ....++.||+.||.|||   +
T Consensus        52 ~~~~~~~~E~~il~~l~hpnIv~l~~~~~~~~~~~lv~E~~~gg~L~~~i~~~~~~~e~~~~~i~~qil~aL~~lH---~  128 (444)
T 3soa_A           52 RDHQKLEREARICRLLKHPNIVRLHDSISEEGHHYLIFDLVTGGELFEDIVAREYYSEADASHCIQQILEAVLHCH---Q  128 (444)
T ss_dssp             HHHHHHHHHHHHHHHCCBTTBCCEEEEEECSSEEEEEECCCBCCBHHHHHHHCSCCCHHHHHHHHHHHHHHHHHHH---H
T ss_pred             HHHHHHHHHHHHHHhCCCcCCCeEEEEEEECCEEEEEEEeCCCCCHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHH---H
Confidence            3456789999999999999999999999999999999999999999998865432    46789999999999999   8


Q ss_pred             CCceeccCCCCCeeec---CCCCeEEeeccCceecCCCCcceeecccccCCCccCcccccccCCCcchhhHHHHHHHHHH
Q 044022           87 RPIVLRNFKTQNILFN---EENVAKWFDFLLSISIPEGETHITTDRVIGTRGYSAPEYISICVLNEKSNVFSFGAFLFEL  163 (241)
Q Consensus        87 ~~ivh~dl~~~nil~~---~~~~~~l~df~~~~~~~~~~~~~~~~~~~~~~~~~aPE~~~~~~~~~~~Di~s~G~~~~~~  163 (241)
                      .+|+||||||+|||++   .++.+||+|||++.........  .....||+.|+|||++.+..++.++||||+|+++|+|
T Consensus       129 ~givHrDlKp~NIll~~~~~~~~vkL~DFG~a~~~~~~~~~--~~~~~gt~~Y~APE~l~~~~~~~~~DIwSlGvilyel  206 (444)
T 3soa_A          129 MGVVHRNLKPENLLLASKLKGAAVKLADFGLAIEVEGEQQA--WFGFAGTPGYLSPEVLRKDPYGKPVDLWACGVILYIL  206 (444)
T ss_dssp             TTCBCCCCSSTTEEESBSSTTCCEEECCCSSCBCCCTTCCB--CCCSCSCGGGCCHHHHTTCCBCTHHHHHHHHHHHHHH
T ss_pred             CCccccCCCHHHEEEeccCCCCcEEEccCceeEEecCCCce--eecccCCcccCCHHHhcCCCCCCccccHHHHHHHHHH
Confidence            9999999999999998   4678999999999766543321  1335789999999999988999999999999999999


Q ss_pred             HhcCcccccccccCCCcccchHHHHHHHhhhcccCCCCCCccccCCCchhHHHHHHHHHHHHHHhccCCCCCCCCCCC
Q 044022          164 LAGRIHIWDLLKDTHDHGCFFNEYLKNYLEDKRFTGIPAPIIVQDIPCIEKEQQLHASAQLTLECVNNSPEDRPTMVD  241 (241)
Q Consensus       164 ~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~cl~~~p~~Rpt~~e  241 (241)
                      ++|..||...         ...+....... +.. ..+.+.+ .        ..++.+.+|+.+||+.||++|||+.|
T Consensus       207 l~G~~Pf~~~---------~~~~~~~~i~~-~~~-~~~~~~~-~--------~~s~~~~~li~~~L~~dP~~Rpta~e  264 (444)
T 3soa_A          207 LVGYPPFWDE---------DQHRLYQQIKA-GAY-DFPSPEW-D--------TVTPEAKDLINKMLTINPSKRITAAE  264 (444)
T ss_dssp             HHSSCSCCCS---------SHHHHHHHHHH-TCC-CCCTTTT-T--------TSCHHHHHHHHHHSCSSTTTSCCHHH
T ss_pred             HhCCCCCCCc---------cHHHHHHHHHh-CCC-CCCcccc-c--------cCCHHHHHHHHHHcCCChhHCCCHHH
Confidence            9999999552         11222222221 111 1111111 1        12357889999999999999999853


No 40 
>3l9p_A Anaplastic lymphoma kinase; kinase domain, ATP-binding, glycoprotein, membrane, nucleotide-binding, phosphoprotein, proto-oncogene; 1.80A {Homo sapiens}
Probab=100.00  E-value=1.2e-41  Score=281.79  Aligned_cols=215  Identities=20%  Similarity=0.267  Sum_probs=165.8

Q ss_pred             CcccccccccccHHHHHHHHHHHHhcCCCcccceeeeeeeCCcceEEEEecCCCCHHHhhcCCC--------c---hHHH
Q 044022            1 MKFYGHEYHRHTYGSCINNITYAAQMSHNHILKRIGCCLQTPIPILVFQSVEYGTLRDCIFGAP--------L---PRLK   69 (241)
Q Consensus         1 iK~~~~~~~~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~~~~~~~lv~e~~~~~sL~~~l~~~~--------~---~~~~   69 (241)
                      ||++..........++.+|+.++++++||||+++++++...+..++||||+++|+|.+++....        .   ..+.
T Consensus       106 vK~~~~~~~~~~~~~~~~E~~~l~~l~hpnIv~~~~~~~~~~~~~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~  185 (367)
T 3l9p_A          106 VKTLPEVCSEQDELDFLMEALIISKFNHQNIVRCIGVSLQSLPRFILLELMAGGDLKSFLRETRPRPSQPSSLAMLDLLH  185 (367)
T ss_dssp             EEECCSSCCHHHHHHHHHHHHHHHHCCCTTBCCEEEEECSSSSCEEEEECCTTEEHHHHHHHHSCCSSSCCCCCHHHHHH
T ss_pred             EEecccccChhhHHHHHHHHHHHHhCCCCCCCeEEEEEecCCCCEEEEEeCCCCCHHHHHHhhccccCccccccHHHHHH
Confidence            3555544445566789999999999999999999999999999999999999999999986431        1   4678


Q ss_pred             HHHHHHHHhchhhcCCCCCceeccCCCCCeeecCCC---CeEEeeccCceecCCCCcceeecccccCCCccCcccccccC
Q 044022           70 IASDIVNSLAYLHFGFPRPIVLRNFKTQNILFNEEN---VAKWFDFLLSISIPEGETHITTDRVIGTRGYSAPEYISICV  146 (241)
Q Consensus        70 ~~~~i~~~l~~lh~~~~~~ivh~dl~~~nil~~~~~---~~~l~df~~~~~~~~~~~~~~~~~~~~~~~~~aPE~~~~~~  146 (241)
                      ++.+++.||.|||   +++|+||||||+|||++.++   .+||+|||++................+|+.|+|||++.+..
T Consensus       186 i~~qi~~aL~~LH---~~~ivHrDlkp~NIll~~~~~~~~~kL~DFG~a~~~~~~~~~~~~~~~~~t~~y~aPE~~~~~~  262 (367)
T 3l9p_A          186 VARDIACGCQYLE---ENHFIHRDIAARNCLLTCPGPGRVAKIGDFGMARDIYRAGYYRKGGCAMLPVKWMPPEAFMEGI  262 (367)
T ss_dssp             HHHHHHHHHHHHH---HTTCCCSCCCGGGEEESCSSTTCCEEECCCHHHHHHHHHSSCTTCCGGGSCGGGCCHHHHHHCC
T ss_pred             HHHHHHHHHHHHH---hCCeeCCCCChhhEEEecCCCCceEEECCCccccccccccccccCCCcCCcccEECHHHhcCCC
Confidence            9999999999999   89999999999999999554   59999999987542222112223346788999999999889


Q ss_pred             CCcchhhHHHHHHHHHHHh-cCcccccccccCCCcccchHHHHHHHhhhcccCCCCCCccccCCCchhHHHHHHHHHHHH
Q 044022          147 LNEKSNVFSFGAFLFELLA-GRIHIWDLLKDTHDHGCFFNEYLKNYLEDKRFTGIPAPIIVQDIPCIEKEQQLHASAQLT  225 (241)
Q Consensus       147 ~~~~~Di~s~G~~~~~~~~-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~  225 (241)
                      ++.++||||||+++|+|++ |..||...         ...+.......... ...     ..        ..+..+.+++
T Consensus       263 ~~~~~DvwslG~il~ellt~g~~pf~~~---------~~~~~~~~i~~~~~-~~~-----~~--------~~~~~l~~li  319 (367)
T 3l9p_A          263 FTSKTDTWSFGVLLWEIFSLGYMPYPSK---------SNQEVLEFVTSGGR-MDP-----PK--------NCPGPVYRIM  319 (367)
T ss_dssp             CCHHHHHHHHHHHHHHHHTTSCCSSTTC---------CHHHHHHHHHTTCC-CCC-----CT--------TCCHHHHHHH
T ss_pred             CCcHHHHHHHHHHHHHHHhCCCCCCCCC---------CHHHHHHHHHcCCC-CCC-----Cc--------cCCHHHHHHH
Confidence            9999999999999999998 99999542         11222222222211 111     11        1225688999


Q ss_pred             HHhccCCCCCCCCCCC
Q 044022          226 LECVNNSPEDRPTMVD  241 (241)
Q Consensus       226 ~~cl~~~p~~Rpt~~e  241 (241)
                      .+||+.||++|||++|
T Consensus       320 ~~~l~~dP~~Rps~~e  335 (367)
T 3l9p_A          320 TQCWQHQPEDRPNFAI  335 (367)
T ss_dssp             HHHTCSSGGGSCCHHH
T ss_pred             HHHcCCCHhHCcCHHH
Confidence            9999999999999753


No 41 
>4dc2_A Protein kinase C IOTA type; kinase, substrate, cell polarity, atypical PKC, trans transferase substrate complex; HET: TPO ADE; 2.40A {Mus musculus}
Probab=100.00  E-value=1.9e-40  Score=276.41  Aligned_cols=209  Identities=21%  Similarity=0.243  Sum_probs=160.6

Q ss_pred             ccHHHHHHHHHHHHhc-CCCcccceeeeeeeCCcceEEEEecCCCCHHHhhcCCC----chHHHHHHHHHHHhchhhcCC
Q 044022           11 HTYGSCINNITYAAQM-SHNHILKRIGCCLQTPIPILVFQSVEYGTLRDCIFGAP----LPRLKIASDIVNSLAYLHFGF   85 (241)
Q Consensus        11 ~~~~~~~~e~~~l~~l-~h~~iv~~~~~~~~~~~~~lv~e~~~~~sL~~~l~~~~----~~~~~~~~~i~~~l~~lh~~~   85 (241)
                      ...+.+.+|..++.++ +||||+++++++...+..++||||+++|+|..++....    .....++.+|+.||.|||   
T Consensus        94 ~~~~~~~~E~~il~~~~~hp~Iv~l~~~~~~~~~~~lV~E~~~gg~L~~~l~~~~~l~~~~~~~~~~qi~~aL~~LH---  170 (396)
T 4dc2_A           94 EDIDWVQTEKHVFEQASNHPFLVGLHSCFQTESRLFFVIEYVNGGDLMFHMQRQRKLPEEHARFYSAEISLALNYLH---  170 (396)
T ss_dssp             --CCHHHHHHHHHHHHTTCTTBCCEEEEEECSSEEEEEEECCTTCBHHHHHHHHSSCCHHHHHHHHHHHHHHHHHHH---
T ss_pred             HHHHHHHHHHHHHHhcCCCCCcCeeEEEEEECCEEEEEEEcCCCCcHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHH---
Confidence            3456688999999987 89999999999999999999999999999999886532    246788999999999999   


Q ss_pred             CCCceeccCCCCCeeecCCCCeEEeeccCceecCCCCcceeecccccCCCccCcccccccCCCcchhhHHHHHHHHHHHh
Q 044022           86 PRPIVLRNFKTQNILFNEENVAKWFDFLLSISIPEGETHITTDRVIGTRGYSAPEYISICVLNEKSNVFSFGAFLFELLA  165 (241)
Q Consensus        86 ~~~ivh~dl~~~nil~~~~~~~~l~df~~~~~~~~~~~~~~~~~~~~~~~~~aPE~~~~~~~~~~~Di~s~G~~~~~~~~  165 (241)
                      +++|+||||||+|||++.++.+||+|||+++.......  ......||+.|+|||++.+..++.++|+||||+++|+|++
T Consensus       171 ~~givHrDLKp~NILl~~~g~ikL~DFGla~~~~~~~~--~~~~~~gt~~Y~aPE~l~~~~~~~~~DiwslGvllyell~  248 (396)
T 4dc2_A          171 ERGIIYRDLKLDNVLLDSEGHIKLTDYGMCKEGLRPGD--TTSTFCGTPNYIAPEILRGEDYGFSVDWWALGVLMFEMMA  248 (396)
T ss_dssp             HTTCBCCCCCGGGEEECTTSCEEECCCTTCBCCCCTTC--CBCCCCBCGGGCCHHHHTTCCBCTHHHHHHHHHHHHHHHH
T ss_pred             HCCEEeccCCHHHEEECCCCCEEEeecceeeecccCCC--ccccccCCcccCCchhhcCCCCChHHHHHHHHHHHHHHHh
Confidence            89999999999999999999999999999975332221  2244679999999999999999999999999999999999


Q ss_pred             cCcccccccccCCCcccchHHHHHHHhhhcccCCCCCCccccCCCchhHHHHHHHHHHHHHHhccCCCCCCCCC
Q 044022          166 GRIHIWDLLKDTHDHGCFFNEYLKNYLEDKRFTGIPAPIIVQDIPCIEKEQQLHASAQLTLECVNNSPEDRPTM  239 (241)
Q Consensus       166 g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~cl~~~p~~Rpt~  239 (241)
                      |+.||............ ..+........... ..     ...        .+..+.+|+.+||+.||++||++
T Consensus       249 G~~Pf~~~~~~~~~~~~-~~~~~~~~i~~~~~-~~-----p~~--------~s~~~~~li~~lL~~dP~~R~~~  307 (396)
T 4dc2_A          249 GRSPFDIVGSSDNPDQN-TEDYLFQVILEKQI-RI-----PRS--------LSVKAASVLKSFLNKDPKERLGC  307 (396)
T ss_dssp             SSCSSTTTTC------C-CHHHHHHHHHHCCC-CC-----CTT--------SCHHHHHHHHHHTCSCTTTSTTC
T ss_pred             CCCCCcccccccccchh-hHHHHHHHHhcccc-CC-----CCc--------CCHHHHHHHHHHhcCCHhHcCCC
Confidence            99999642221111111 11112121111111 11     111        22578899999999999999997


No 42 
>4euu_A Serine/threonine-protein kinase TBK1; ATP binding, phosphorylation, transferase-transferas inhibitor complex; HET: SEP BX7; 1.80A {Homo sapiens}
Probab=100.00  E-value=1.9e-40  Score=269.51  Aligned_cols=230  Identities=16%  Similarity=0.192  Sum_probs=171.4

Q ss_pred             CcccccccccccHHHHHHHHHHHHhcCCCcccceeeeeeeCC--cceEEEEecCCCCHHHhhcCCC-------chHHHHH
Q 044022            1 MKFYGHEYHRHTYGSCINNITYAAQMSHNHILKRIGCCLQTP--IPILVFQSVEYGTLRDCIFGAP-------LPRLKIA   71 (241)
Q Consensus         1 iK~~~~~~~~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~~~~--~~~lv~e~~~~~sL~~~l~~~~-------~~~~~~~   71 (241)
                      ||++.........+.+.+|++++++++||||+++++++....  ..++||||+++++|.+++....       .....++
T Consensus        39 vK~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~i~  118 (319)
T 4euu_A           39 IKVFNNISFLRPVDVQMREFEVLKKLNHKNIVKLFAIEEETTTRHKVLIMEFCPCGSLYTVLEEPSNAYGLPESEFLIVL  118 (319)
T ss_dssp             EEEECGGGGGSCHHHHHHHHHHHHHCCCTTBCCEEEEEECTTTCCEEEEEECCTTCBHHHHHHSGGGTTCCCHHHHHHHH
T ss_pred             EEEeccccccchHHHHHHHHHHHHhcCCCCcceEEEEeecCCCceEEEEEeCCCCCCHHHHHHHhccccCCCHHHHHHHH
Confidence            466665555566788899999999999999999999998655  7799999999999999987642       1467899


Q ss_pred             HHHHHHhchhhcCCCCCceeccCCCCCeee----cCCCCeEEeeccCceecCCCCcceeecccccCCCccCccccc----
Q 044022           72 SDIVNSLAYLHFGFPRPIVLRNFKTQNILF----NEENVAKWFDFLLSISIPEGETHITTDRVIGTRGYSAPEYIS----  143 (241)
Q Consensus        72 ~~i~~~l~~lh~~~~~~ivh~dl~~~nil~----~~~~~~~l~df~~~~~~~~~~~~~~~~~~~~~~~~~aPE~~~----  143 (241)
                      .|++.||.|||   +.+++||||||+||++    +..+.+||+|||.+.........   ....|++.|+|||++.    
T Consensus       119 ~qi~~~L~~LH---~~~ivH~Dlkp~NIll~~~~~~~~~~kL~Dfg~a~~~~~~~~~---~~~~gt~~y~aPE~~~~~~~  192 (319)
T 4euu_A          119 RDVVGGMNHLR---ENGIVHRNIKPGNIMRVIGEDGQSVYKLTDFGAARELEDDEQF---VSLYGTEEYLHPDMYERAVL  192 (319)
T ss_dssp             HHHHHHHHHHH---HTTEECSCCSGGGEEEEECTTSCEEEEECCCTTCEECCTTCCB---CCCCSCGGGCCHHHHHHHTS
T ss_pred             HHHHHHHHHHH---HCCEecCCCCHHHEEEeccCCCCceEEEccCCCceecCCCCce---eecccCCCccCHHHhhhccc
Confidence            99999999999   8999999999999999    77888999999999876554322   2346899999999986    


Q ss_pred             ----ccCCCcchhhHHHHHHHHHHHhcCcccccccccCCCcccchHHHHHHHhhhcccC------CCCCCc--cccCCC-
Q 044022          144 ----ICVLNEKSNVFSFGAFLFELLAGRIHIWDLLKDTHDHGCFFNEYLKNYLEDKRFT------GIPAPI--IVQDIP-  210 (241)
Q Consensus       144 ----~~~~~~~~Di~s~G~~~~~~~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~------~~~~~~--~~~~~~-  210 (241)
                          +..++.++||||||+++|+|++|+.||......     ....+.+..........      ......  +....+ 
T Consensus       193 ~~~~~~~~~~~~DiwslG~il~el~~g~~pf~~~~~~-----~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~  267 (319)
T 4euu_A          193 RKDHQKKYGATVDLWSIGVTFYHAATGSLPFRPFEGP-----RRNKEVMYKIITGKPSGAISGVQKAENGPIDWSGDMPV  267 (319)
T ss_dssp             CCCCCCCBCTTHHHHHHHHHHHHHHHSSCSEECTTCG-----GGCHHHHHHHHHHCCTTCCEEEECSTTCCEEEESSCCT
T ss_pred             cccccCCCCcHHHHHHHHHHHHHHHhCCCCCCCCCcc-----chhHHHHHHHhcCCCcccchhhhcccCCccccCccCCc
Confidence                467889999999999999999999999642211     11222222222211100      000000  000111 


Q ss_pred             -chhHHHHHHHHHHHHHHhccCCCCCCCCCCC
Q 044022          211 -CIEKEQQLHASAQLTLECVNNSPEDRPTMVD  241 (241)
Q Consensus       211 -~~~~~~~~~~~~~l~~~cl~~~p~~Rpt~~e  241 (241)
                       .......+..+.+++.+||+.||++|||++|
T Consensus       268 ~~~~~~~~~~~l~~ll~~~L~~dP~~R~s~~e  299 (319)
T 4euu_A          268 SCSLSRGLQVLLTPVLANILEADQEKCWGFDQ  299 (319)
T ss_dssp             TCSSCHHHHHHHHHHHHHHSCCCTTTSCCHHH
T ss_pred             ccccchhHHHHhHHHHHHhccCChhhhccHHH
Confidence             1122466778999999999999999999864


No 43 
>2bdw_A Hypothetical protein K11E8.1D; kinase, calmodulin activated, transferase; 1.80A {Caenorhabditis elegans} PDB: 2wel_A* 2v7o_A* 2vz6_A* 1cdm_B 1cm1_B 1cm4_B
Probab=100.00  E-value=9.1e-41  Score=275.97  Aligned_cols=205  Identities=22%  Similarity=0.345  Sum_probs=162.4

Q ss_pred             ccHHHHHHHHHHHHhcCCCcccceeeeeeeCCcceEEEEecCCCCHHHhhcCCCc----hHHHHHHHHHHHhchhhcCCC
Q 044022           11 HTYGSCINNITYAAQMSHNHILKRIGCCLQTPIPILVFQSVEYGTLRDCIFGAPL----PRLKIASDIVNSLAYLHFGFP   86 (241)
Q Consensus        11 ~~~~~~~~e~~~l~~l~h~~iv~~~~~~~~~~~~~lv~e~~~~~sL~~~l~~~~~----~~~~~~~~i~~~l~~lh~~~~   86 (241)
                      ...+.+.+|++++++++||||+++++++...+..++||||+++|+|.+++.....    ....++.||+.||.|||   +
T Consensus        70 ~~~~~~~~E~~il~~l~hpnIv~~~~~~~~~~~~~lv~e~~~gg~L~~~l~~~~~~~~~~~~~~~~qi~~al~~lH---~  146 (362)
T 2bdw_A           70 RDFQKLEREARICRKLQHPNIVRLHDSIQEESFHYLVFDLVTGGELFEDIVAREFYSEADASHCIQQILESIAYCH---S  146 (362)
T ss_dssp             HHHHHHHHHHHHHHHCCCTTBCCEEEEEECSSEEEEEECCCCSCBHHHHHTTCSCCCHHHHHHHHHHHHHHHHHHH---H
T ss_pred             HHHHHHHHHHHHHHhCCCCCCCeEEEEEEeCCEEEEEEecCCCCCHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHH---H
Confidence            3457789999999999999999999999999999999999999999998866532    46789999999999999   8


Q ss_pred             CCceeccCCCCCeeecCCC---CeEEeeccCceecCCCCcceeecccccCCCccCcccccccCCCcchhhHHHHHHHHHH
Q 044022           87 RPIVLRNFKTQNILFNEEN---VAKWFDFLLSISIPEGETHITTDRVIGTRGYSAPEYISICVLNEKSNVFSFGAFLFEL  163 (241)
Q Consensus        87 ~~ivh~dl~~~nil~~~~~---~~~l~df~~~~~~~~~~~~~~~~~~~~~~~~~aPE~~~~~~~~~~~Di~s~G~~~~~~  163 (241)
                      .+++||||||+|||++.++   .+||+|||++........   .....||+.|+|||++.+..++.++||||||+++|+|
T Consensus       147 ~~ivH~Dlkp~NIll~~~~~~~~~kl~DfG~a~~~~~~~~---~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~~l  223 (362)
T 2bdw_A          147 NGIVHRNLKPENLLLASKAKGAAVKLADFGLAIEVNDSEA---WHGFAGTPGYLSPEVLKKDPYSKPVDIWACGVILYIL  223 (362)
T ss_dssp             TTCBCCCCSGGGEEESCSSTTCCEEECCCTTCBCCTTCCS---CCCSCSCTTTCCHHHHTTCCCCTHHHHHHHHHHHHHH
T ss_pred             CCeEeccCchHHEEEecCCCCCCEEEeecCcceEecCCcc---cccCCCCccccCHHHHccCCCCchhhHHHHHHHHHHH
Confidence            9999999999999998654   599999999976654322   1235789999999999988999999999999999999


Q ss_pred             HhcCcccccccccCCCcccchHHHHHHHhhhcccCCCCCCccccCCCchhHHHHHHHHHHHHHHhccCCCCCCCCCCC
Q 044022          164 LAGRIHIWDLLKDTHDHGCFFNEYLKNYLEDKRFTGIPAPIIVQDIPCIEKEQQLHASAQLTLECVNNSPEDRPTMVD  241 (241)
Q Consensus       164 ~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~cl~~~p~~Rpt~~e  241 (241)
                      ++|..||....         ..+...... .+.. ..+.+.+         ...+..+.+|+.+||+.||++|||++|
T Consensus       224 l~g~~Pf~~~~---------~~~~~~~i~-~~~~-~~~~~~~---------~~~~~~~~~li~~~L~~dP~~R~t~~e  281 (362)
T 2bdw_A          224 LVGYPPFWDED---------QHRLYAQIK-AGAY-DYPSPEW---------DTVTPEAKSLIDSMLTVNPKKRITADQ  281 (362)
T ss_dssp             HHSSCSSCCSS---------HHHHHHHHH-HTCC-CCCTTGG---------GGSCHHHHHHHHHHSCSSGGGSCCHHH
T ss_pred             HHCCCCCCCCC---------HHHHHHHHH-hCCC-CCCcccc---------cCCCHHHHHHHHHHcCCChhhCcCHHH
Confidence            99999996521         112222211 1111 1111111         122357889999999999999999753


No 44 
>2qol_A Ephrin receptor; receptor tyrosine kinase, juxtamembrane segment, structural genomics, mutant, structural genomics consortium, SGC, ATP- binding; 1.07A {Homo sapiens} PDB: 2qok_A 2qoi_A 2qoo_A 2qof_A 2qod_A 2qo9_A* 2gsf_A 2qo7_A* 2qo2_A* 2qoq_A* 2qon_A* 3fxx_A* 3fy2_A 2qoc_A* 2qob_A* 3dzq_A* 2r2p_A 2hel_A 2rei_A 3dko_A* ...
Probab=100.00  E-value=6.4e-41  Score=277.92  Aligned_cols=214  Identities=22%  Similarity=0.324  Sum_probs=156.2

Q ss_pred             cccccccccccHHHHHHHHHHHHhcCCCcccceeeeeeeCCcceEEEEecCCCCHHHhhcCCCc-----hHHHHHHHHHH
Q 044022            2 KFYGHEYHRHTYGSCINNITYAAQMSHNHILKRIGCCLQTPIPILVFQSVEYGTLRDCIFGAPL-----PRLKIASDIVN   76 (241)
Q Consensus         2 K~~~~~~~~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~~~~~~~lv~e~~~~~sL~~~l~~~~~-----~~~~~~~~i~~   76 (241)
                      |.+.........++|.+|++++++++||||+++++++...+..++||||+++|+|.+++.....     .++.++.+++.
T Consensus        79 K~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~lv~e~~~~~sL~~~l~~~~~~~~~~~~~~i~~qi~~  158 (373)
T 2qol_A           79 KTLKVGYTEKQRRDFLGEASIMGQFDHPNIIRLEGVVTKSKPVMIVTEYMENGSLDSFLRKHDAQFTVIQLVGMLRGIAS  158 (373)
T ss_dssp             EECCTTCCHHHHHHHHHHHHHHTTCCCTTBCCEEEEECSSSSCEEEEECCTTCBHHHHHHTTTTCSCHHHHHHHHHHHHH
T ss_pred             EEecCccCHHHHHHHHHHHHHHHhCCCCCCCeEEEEEeeCCceEEEEeCCCCCcHHHHHHhCCCCCCHHHHHHHHHHHHH
Confidence            4444433444567899999999999999999999999999999999999999999999976432     46789999999


Q ss_pred             HhchhhcCCCCCceeccCCCCCeeecCCCCeEEeeccCceecCCCCcc-eeecccccCCCccCcccccccCCCcchhhHH
Q 044022           77 SLAYLHFGFPRPIVLRNFKTQNILFNEENVAKWFDFLLSISIPEGETH-ITTDRVIGTRGYSAPEYISICVLNEKSNVFS  155 (241)
Q Consensus        77 ~l~~lh~~~~~~ivh~dl~~~nil~~~~~~~~l~df~~~~~~~~~~~~-~~~~~~~~~~~~~aPE~~~~~~~~~~~Di~s  155 (241)
                      ||.|||   +.+++||||||+|||++.++.+||+|||++......... .......++..|+|||++.+..++.++||||
T Consensus       159 aL~~LH---~~~ivH~Dlkp~NIll~~~~~~kl~Dfg~a~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Dv~S  235 (373)
T 2qol_A          159 GMKYLS---DMGYVHRDLAARNILINSNLVCKVSDFGLGRVLEDDPEAAYTTRGGKIPIRWTSPEAIAYRKFTSASDVWS  235 (373)
T ss_dssp             HHHHHH---HTTCCCSCCCGGGEEECTTCCEEECCC----------------------CTTSCHHHHHHCCCCHHHHHHH
T ss_pred             HHHHHH---HCCeeCCCCCcceEEEcCCCCEEECcCccccccccCCccceeccCCCcCCCccChhhhccCCcCchhcHHH
Confidence            999999   899999999999999999999999999999765443211 1111223567899999999889999999999


Q ss_pred             HHHHHHHHHh-cCcccccccccCCCcccchHHHHHHHhhhcccCCCCCCccccCCCchhHHHHHHHHHHHHHHhccCCCC
Q 044022          156 FGAFLFELLA-GRIHIWDLLKDTHDHGCFFNEYLKNYLEDKRFTGIPAPIIVQDIPCIEKEQQLHASAQLTLECVNNSPE  234 (241)
Q Consensus       156 ~G~~~~~~~~-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~cl~~~p~  234 (241)
                      ||+++|++++ |+.||....         ..+.......... ....     .        ..+..+.+++.+||+.||+
T Consensus       236 lG~il~ellt~g~~P~~~~~---------~~~~~~~i~~~~~-~~~~-----~--------~~~~~l~~li~~cl~~dp~  292 (373)
T 2qol_A          236 YGIVLWEVMSYGERPYWEMS---------NQDVIKAVDEGYR-LPPP-----M--------DCPAALYQLMLDCWQKDRN  292 (373)
T ss_dssp             HHHHHHHHHTTC-CTTTTCC---------HHHHHHHHHTTEE-CCCC-----T--------TCBHHHHHHHHHHTCSSGG
T ss_pred             HHHHHHHHHhCCCCCCCCCC---------HHHHHHHHHcCCC-CCCC-----c--------cccHHHHHHHHHHhCcChh
Confidence            9999999998 999996521         1222222221111 1100     1        1225789999999999999


Q ss_pred             CCCCCCC
Q 044022          235 DRPTMVD  241 (241)
Q Consensus       235 ~Rpt~~e  241 (241)
                      +|||++|
T Consensus       293 ~RPs~~~  299 (373)
T 2qol_A          293 NRPKFEQ  299 (373)
T ss_dssp             GSCCHHH
T ss_pred             hCcCHHH
Confidence            9999753


No 45 
>3lb7_A RAF proto-oncogene serine/threonine-protein kinas; kinase domain, alternative splicing, ATP-binding, disease MU kinase, metal-binding; 4.00A {Homo sapiens} PDB: 3omv_A*
Probab=100.00  E-value=1.7e-40  Score=268.54  Aligned_cols=209  Identities=21%  Similarity=0.287  Sum_probs=156.2

Q ss_pred             ccHHHHHHHHHHHHhcCCCcccceeeeeeeCCcceEEEEecCCCCHHHhhcCCCc-----hHHHHHHHHHHHhchhhcCC
Q 044022           11 HTYGSCINNITYAAQMSHNHILKRIGCCLQTPIPILVFQSVEYGTLRDCIFGAPL-----PRLKIASDIVNSLAYLHFGF   85 (241)
Q Consensus        11 ~~~~~~~~e~~~l~~l~h~~iv~~~~~~~~~~~~~lv~e~~~~~sL~~~l~~~~~-----~~~~~~~~i~~~l~~lh~~~   85 (241)
                      ...+.|.+|++++++++||||+++++++. .+..++||||+++++|.+++.....     ....++.+++.||.|||   
T Consensus        74 ~~~~~~~~E~~~l~~l~h~~iv~~~~~~~-~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~i~~qi~~~L~~LH---  149 (307)
T 3lb7_A           74 EQFQAFRNEVAVLRKTRHVNILLFMGYMT-KDNLAIVTQWCEGSSLYKHLHVQETKFQMFQLIDIARQTAQGMDYLH---  149 (307)
T ss_dssp             HHHHHHHHHHHHHTTCCCTTBCCEEEEEC-SSSCEEEEECCSSCBHHHHHHTSCCCCCHHHHHHHHHHHHHHHHHHH---
T ss_pred             HHHHHHHHHHHHHHhCCCCCEEEEEEEEc-cCcEEEEEecCCCCcHHHHHHhcccCCCHHHHHHHHHHHHHHHHHHH---
Confidence            34678999999999999999999999875 4568999999999999999864321     46789999999999999   


Q ss_pred             CCCceeccCCCCCeeecCCCCeEEeeccCceecCCCCcceeecccccCCCccCccccc---ccCCCcchhhHHHHHHHHH
Q 044022           86 PRPIVLRNFKTQNILFNEENVAKWFDFLLSISIPEGETHITTDRVIGTRGYSAPEYIS---ICVLNEKSNVFSFGAFLFE  162 (241)
Q Consensus        86 ~~~ivh~dl~~~nil~~~~~~~~l~df~~~~~~~~~~~~~~~~~~~~~~~~~aPE~~~---~~~~~~~~Di~s~G~~~~~  162 (241)
                      +.+++||||||+|||++.++.+||+|||++................|++.|+|||++.   +..++.++||||||+++|+
T Consensus       150 ~~~ivH~Dlkp~NIll~~~~~~kl~DFg~a~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~Di~slG~il~e  229 (307)
T 3lb7_A          150 AKNIIHRDMKSNNIFLHEGLTVKIGDFGLATVKSRWSGSQQVEQPTGSVLWMAPEVIRMQDNNPFSFQSDVYSYGIVLYE  229 (307)
T ss_dssp             HTTCCCSCCCSSSEEECTTSCEEECCCCSSCC------------CCCCTTSCCHHHHHCCSSCCCCHHHHHHHHHHHHHH
T ss_pred             hCCEeeCCCChhhEEEcCCCCEEEccCCCceecccccccccccCCCCCcceECcceeeccCCCCCCchhhHHHHHHHHHH
Confidence            8999999999999999999999999999987554322222233457899999999986   5568889999999999999


Q ss_pred             HHhcCcccccccccCCCcccchHHHHHHHhhhcccCCCCCCccccCCCchhHHHHHHHHHHHHHHhccCCCCCCCCCCC
Q 044022          163 LLAGRIHIWDLLKDTHDHGCFFNEYLKNYLEDKRFTGIPAPIIVQDIPCIEKEQQLHASAQLTLECVNNSPEDRPTMVD  241 (241)
Q Consensus       163 ~~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~cl~~~p~~Rpt~~e  241 (241)
                      |++|+.||.....         .+........+..... ...+...        +++.+.+++.+||+.||++|||+.|
T Consensus       230 lltg~~Pf~~~~~---------~~~~~~~~~~~~~~~~-~~~~~~~--------~~~~l~~li~~~l~~~p~~RPs~~~  290 (307)
T 3lb7_A          230 LMTGELPYSHINN---------RDQIIFMVGRGYASPD-LSKLYKN--------CPKAMKRLVADCVKKVKEERPLFPQ  290 (307)
T ss_dssp             HHHSSCTTTTCCC---------HHHHHHHHHHTCCCCC-STTSCSS--------SCHHHHHHHHHHSCSSSTTSCCHHH
T ss_pred             HHhCCCCCccCCc---------HHHHHHHHhcCCCCcc-hhhhhcC--------CcHHHHHHHHHHhhCChhhCcCHHH
Confidence            9999999964211         1111111111111111 1111122        2267899999999999999999753


No 46 
>1o6l_A RAC-beta serine/threonine protein kinase; protein kinase, transferase, serine/threonine-protein kinase; HET: TPO ANP; 1.6A {Homo sapiens} SCOP: d.144.1.7 PDB: 2jdo_A* 2jdr_A* 2uw9_A* 2x37_A* 2x39_A* 2xh5_A* 3d0e_A* 3e87_A* 3e88_A* 3e8d_A* 1o6k_A* 1mrv_A 1mry_A 1gzn_A 1gzk_A 1gzo_A 3qkl_A* 3ocb_A* 3ow4_A* 3qkk_A* ...
Probab=100.00  E-value=1.9e-40  Score=271.38  Aligned_cols=199  Identities=17%  Similarity=0.238  Sum_probs=160.5

Q ss_pred             cccHHHHHHHHHHHHhcCCCcccceeeeeeeCCcceEEEEecCCCCHHHhhcCCC----chHHHHHHHHHHHhchhhcCC
Q 044022           10 RHTYGSCINNITYAAQMSHNHILKRIGCCLQTPIPILVFQSVEYGTLRDCIFGAP----LPRLKIASDIVNSLAYLHFGF   85 (241)
Q Consensus        10 ~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~~~~~~~lv~e~~~~~sL~~~l~~~~----~~~~~~~~~i~~~l~~lh~~~   85 (241)
                      ......+.+|++++++++||||+++++++...+..++||||+++|+|.+++....    .....++.+|+.||.|||   
T Consensus        46 ~~~~~~~~~E~~~l~~l~hp~iv~l~~~~~~~~~~~lv~E~~~gg~L~~~l~~~~~~~~~~~~~~~~qi~~aL~~LH---  122 (337)
T 1o6l_A           46 KDEVAHTVTESRVLQNTRHPFLTALKYAFQTHDRLCFVMEYANGGELFFHLSRERVFTEERARFYGAEIVSALEYLH---  122 (337)
T ss_dssp             TTCHHHHHHHHHHHHSCCCTTBCCEEEEEECSSEEEEEEECCTTCBHHHHHHHHSCCCHHHHHHHHHHHHHHHHHHH---
T ss_pred             hhHHHHHHHHHHHHHhCCCCcCcceEEEEEeCCEEEEEEeCCCCCcHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHH---
Confidence            3456788999999999999999999999999999999999999999999886532    246778999999999999   


Q ss_pred             CCCceeccCCCCCeeecCCCCeEEeeccCceecCCCCcceeecccccCCCccCcccccccCCCcchhhHHHHHHHHHHHh
Q 044022           86 PRPIVLRNFKTQNILFNEENVAKWFDFLLSISIPEGETHITTDRVIGTRGYSAPEYISICVLNEKSNVFSFGAFLFELLA  165 (241)
Q Consensus        86 ~~~ivh~dl~~~nil~~~~~~~~l~df~~~~~~~~~~~~~~~~~~~~~~~~~aPE~~~~~~~~~~~Di~s~G~~~~~~~~  165 (241)
                      +++|+||||||+|||++.++.+||+|||++........  ......||+.|+|||++.+..++.++|+||||+++|+|++
T Consensus       123 ~~~ivHrDlkp~NIll~~~g~vkL~DFG~a~~~~~~~~--~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~ell~  200 (337)
T 1o6l_A          123 SRDVVYRDIKLENLMLDKDGHIKITDFGLCKEGISDGA--TMKTFCGTPEYLAPEVLEDNDYGRAVDWWGLGVVMYEMMC  200 (337)
T ss_dssp             HTTCBCCCCCGGGEEECTTSCEEECCCTTCBCSCCTTC--CBCCCEECGGGCCGGGGSSSCBCTTHHHHHHHHHHHHHHH
T ss_pred             HCCeecCcCCHHHEEECCCCCEEEeeccchhhcccCCC--cccccccChhhCChhhhcCCCCCchhhcccchhHHHHHhc
Confidence            89999999999999999999999999999875432221  1234578999999999998899999999999999999999


Q ss_pred             cCcccccccccCCCcccchHHHHHHHhhhcccCCCCCCccccCCCchhHHHHHHHHHHHHHHhccCCCCCCC
Q 044022          166 GRIHIWDLLKDTHDHGCFFNEYLKNYLEDKRFTGIPAPIIVQDIPCIEKEQQLHASAQLTLECVNNSPEDRP  237 (241)
Q Consensus       166 g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~cl~~~p~~Rp  237 (241)
                      |..||....         ..+......... .      .+...        .+..+.+++.+||+.||++||
T Consensus       201 g~~Pf~~~~---------~~~~~~~i~~~~-~------~~p~~--------~s~~~~~li~~lL~~dP~~R~  248 (337)
T 1o6l_A          201 GRLPFYNQD---------HERLFELILMEE-I------RFPRT--------LSPEAKSLLAGLLKKDPKQRL  248 (337)
T ss_dssp             SSCSSCCSS---------HHHHHHHHHHCC-C------CCCTT--------SCHHHHHHHHHHTCSSTTTST
T ss_pred             CCCCCCCCC---------HHHHHHHHHcCC-C------CCCCC--------CCHHHHHHHHHHhhcCHHHhc
Confidence            999996521         112222221111 0      11111        225788999999999999999


No 47 
>2y0a_A Death-associated protein kinase 1; transferase, calmodulin, esprit; HET: MES; 2.60A {Homo sapiens}
Probab=100.00  E-value=1.3e-40  Score=271.45  Aligned_cols=204  Identities=20%  Similarity=0.263  Sum_probs=163.0

Q ss_pred             cHHHHHHHHHHHHhcCCCcccceeeeeeeCCcceEEEEecCCCCHHHhhcCCCc----hHHHHHHHHHHHhchhhcCCCC
Q 044022           12 TYGSCINNITYAAQMSHNHILKRIGCCLQTPIPILVFQSVEYGTLRDCIFGAPL----PRLKIASDIVNSLAYLHFGFPR   87 (241)
Q Consensus        12 ~~~~~~~e~~~l~~l~h~~iv~~~~~~~~~~~~~lv~e~~~~~sL~~~l~~~~~----~~~~~~~~i~~~l~~lh~~~~~   87 (241)
                      ..+.+.+|+.++++++||||+++++++...+..++||||+++++|.+++.....    ....++.+++.||.|||   +.
T Consensus        57 ~~~~~~~E~~~l~~l~hp~iv~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~i~~qi~~al~~lH---~~  133 (326)
T 2y0a_A           57 SREDIEREVSILKEIQHPNVITLHEVYENKTDVILILELVAGGELFDFLAEKESLTEEEATEFLKQILNGVYYLH---SL  133 (326)
T ss_dssp             CHHHHHHHHHHHHHCCCTTBCCEEEEEECSSEEEEEEECCCSCBHHHHHTTSSCCBHHHHHHHHHHHHHHHHHHH---HT
T ss_pred             hHHHHHHHHHHHHhCCCCCCCcEEEEEEeCCEEEEEEEcCCCCCHHHHHHhcCCcCHHHHHHHHHHHHHHHHHHH---HC
Confidence            467899999999999999999999999999999999999999999999876432    56789999999999999   89


Q ss_pred             CceeccCCCCCeeecCCC----CeEEeeccCceecCCCCcceeecccccCCCccCcccccccCCCcchhhHHHHHHHHHH
Q 044022           88 PIVLRNFKTQNILFNEEN----VAKWFDFLLSISIPEGETHITTDRVIGTRGYSAPEYISICVLNEKSNVFSFGAFLFEL  163 (241)
Q Consensus        88 ~ivh~dl~~~nil~~~~~----~~~l~df~~~~~~~~~~~~~~~~~~~~~~~~~aPE~~~~~~~~~~~Di~s~G~~~~~~  163 (241)
                      +++||||||+||+++.++    .+||+|||++........   .....||+.|+|||++.+..++.++||||||+++|+|
T Consensus       134 ~ivH~Dlkp~NIll~~~~~~~~~~kl~Dfg~a~~~~~~~~---~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~~l  210 (326)
T 2y0a_A          134 QIAHFDLKPENIMLLDRNVPKPRIKIIDFGLAHKIDFGNE---FKNIFGTPEFVAPEIVNYEPLGLEADMWSIGVITYIL  210 (326)
T ss_dssp             TEECCCCCGGGEEESCSSSSSCCEEECCCTTCEECCTTSC---CCCCCSCTTTCCHHHHTTCCCCTHHHHHHHHHHHHHH
T ss_pred             CeEcCCCCHHHEEEecCCCCCCCEEEEECCCCeECCCCCc---cccccCCcCcCCceeecCCCCCcHHHHHHHHHHHHHH
Confidence            999999999999998887    899999999987654322   1334689999999999988999999999999999999


Q ss_pred             HhcCcccccccccCCCcccchHHHHHHHhhhcccCCCCCCccccCCCchhHHHHHHHHHHHHHHhccCCCCCCCCCCC
Q 044022          164 LAGRIHIWDLLKDTHDHGCFFNEYLKNYLEDKRFTGIPAPIIVQDIPCIEKEQQLHASAQLTLECVNNSPEDRPTMVD  241 (241)
Q Consensus       164 ~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~cl~~~p~~Rpt~~e  241 (241)
                      ++|..||....         ..+......... . . ......        ...+..+.+++.+||+.||++|||++|
T Consensus       211 l~g~~pf~~~~---------~~~~~~~~~~~~-~-~-~~~~~~--------~~~~~~~~~li~~~L~~dP~~Rpt~~e  268 (326)
T 2y0a_A          211 LSGASPFLGDT---------KQETLANVSAVN-Y-E-FEDEYF--------SNTSALAKDFIRRLLVKDPKKRMTIQD  268 (326)
T ss_dssp             HHSCCSSCCSS---------HHHHHHHHHHTC-C-C-CCHHHH--------TTSCHHHHHHHHHHSCSSGGGSCCHHH
T ss_pred             HHCcCCCCCCC---------HHHHHHHHHhcC-C-C-cCcccc--------ccCCHHHHHHHHHHccCChhhCCCHHH
Confidence            99999995421         112222211111 0 0 000000        122357889999999999999999753


No 48 
>3poz_A Epidermal growth factor receptor; kinase domain, anti-oncogene, ATP-binding, cell cycle, disea mutation, glycoprotein, membrane, nucleotide-binding; HET: 03P; 1.50A {Homo sapiens} SCOP: d.144.1.7 PDB: 2itx_A* 2ity_A* 2j5f_A* 2j6m_A* 2itw_A* 1m14_A 1m17_A* 3vjo_A* 2gs6_A* 2gs2_A* 2rf9_A 4g5j_A* 1xkk_A* 2eb2_A 3gop_A 2eb3_A* 2itn_A* 2ito_A* 2itp_A* 2itq_A* ...
Probab=100.00  E-value=4.2e-41  Score=274.43  Aligned_cols=213  Identities=19%  Similarity=0.235  Sum_probs=160.3

Q ss_pred             cccccccccccHHHHHHHHHHHHhcCCCcccceeeeeeeCCcceEEEEecCCCCHHHhhcCCC-----chHHHHHHHHHH
Q 044022            2 KFYGHEYHRHTYGSCINNITYAAQMSHNHILKRIGCCLQTPIPILVFQSVEYGTLRDCIFGAP-----LPRLKIASDIVN   76 (241)
Q Consensus         2 K~~~~~~~~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~~~~~~~lv~e~~~~~sL~~~l~~~~-----~~~~~~~~~i~~   76 (241)
                      |.+.........++|.+|++++++++||||+++++++..+. .++|++++.+|+|.+++....     ...+.++.+++.
T Consensus        50 K~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~-~~~v~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~qi~~  128 (327)
T 3poz_A           50 KELREATSPKANKEILDEAYVMASVDNPHVCRLLGICLTST-VQLITQLMPFGCLLDYVREHKDNIGSQYLLNWCVQIAK  128 (327)
T ss_dssp             EEC-------CHHHHHHHHHHHHHCCBTTBCCEEEEEESSS-EEEEEECCTTCBHHHHHHHSTTSCCHHHHHHHHHHHHH
T ss_pred             eecccccCHHHHHHHHHHHHHHHhCCCCCEeEEEEEEecCC-eEEEEEecCCCcHHHHHHhcCCCCCHHHHHHHHHHHHH
Confidence            33433344456788999999999999999999999998765 788999999999999986532     146789999999


Q ss_pred             HhchhhcCCCCCceeccCCCCCeeecCCCCeEEeeccCceecCCCCcceeecccccCCCccCcccccccCCCcchhhHHH
Q 044022           77 SLAYLHFGFPRPIVLRNFKTQNILFNEENVAKWFDFLLSISIPEGETHITTDRVIGTRGYSAPEYISICVLNEKSNVFSF  156 (241)
Q Consensus        77 ~l~~lh~~~~~~ivh~dl~~~nil~~~~~~~~l~df~~~~~~~~~~~~~~~~~~~~~~~~~aPE~~~~~~~~~~~Di~s~  156 (241)
                      ||.|||   +.+++||||||+|||++.++.+||+|||++................+|..|+|||++.+..++.++|||||
T Consensus       129 ~l~~LH---~~~ivH~Dikp~NIll~~~~~~kl~Dfg~a~~~~~~~~~~~~~~~~~t~~y~aPE~~~~~~~~~~~Di~sl  205 (327)
T 3poz_A          129 GMNYLE---DRRLVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEYHAEGGKVPIKWMALESILHRIYTHQSDVWSY  205 (327)
T ss_dssp             HHHHHH---HTTCCCSCCCGGGEEEEETTEEEECCTTHHHHHTTTCC-------CCCGGGSCHHHHHHCCCCHHHHHHHH
T ss_pred             HHHHHh---hCCeeCCCCChheEEECCCCCEEEccCcceeEccCCcccccccCCCccccccChHHhccCCCCchhhhhhh
Confidence            999999   89999999999999999999999999999987655443333334456788999999999999999999999


Q ss_pred             HHHHHHHHh-cCcccccccccCCCcccchHHHHHHHhhhcccCCCCCCccccCCCchhHHHHHHHHHHHHHHhccCCCCC
Q 044022          157 GAFLFELLA-GRIHIWDLLKDTHDHGCFFNEYLKNYLEDKRFTGIPAPIIVQDIPCIEKEQQLHASAQLTLECVNNSPED  235 (241)
Q Consensus       157 G~~~~~~~~-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~cl~~~p~~  235 (241)
                      |+++|+|++ |+.||......         +..... ..+.....     ..        ..+..+.+++.+||+.||++
T Consensus       206 G~il~ellt~g~~p~~~~~~~---------~~~~~~-~~~~~~~~-----~~--------~~~~~~~~li~~~l~~~p~~  262 (327)
T 3poz_A          206 GVTVWELMTFGSKPYDGIPAS---------EISSIL-EKGERLPQ-----PP--------ICTIDVYMIMVKCWMIDADS  262 (327)
T ss_dssp             HHHHHHHHTTSCCTTTTCCGG---------GHHHHH-HTTCCCCC-----CT--------TBCHHHHHHHHHHTCSCGGG
T ss_pred             HHHHHHHHhcCCCCccCCCHH---------HHHHHH-HcCCCCCC-----Cc--------cCCHHHHHHHHHHcCCChhh
Confidence            999999999 99999652211         111111 11111111     11        12257889999999999999


Q ss_pred             CCCCCC
Q 044022          236 RPTMVD  241 (241)
Q Consensus       236 Rpt~~e  241 (241)
                      |||+.|
T Consensus       263 Rps~~e  268 (327)
T 3poz_A          263 RPKFRE  268 (327)
T ss_dssp             SCCHHH
T ss_pred             CCCHHH
Confidence            999753


No 49 
>1t46_A HOMO sapiens V-KIT hardy-zuckerman 4 feline sarcoma viral oncogene homolog; kinase, structure, inhibitor, STI-571, gleevec, transferase activator; HET: STI; 1.60A {Homo sapiens} SCOP: d.144.1.7 PDB: 1pkg_A* 1t45_A 3g0e_A* 3g0f_A*
Probab=100.00  E-value=3.6e-41  Score=272.78  Aligned_cols=216  Identities=20%  Similarity=0.323  Sum_probs=169.2

Q ss_pred             CcccccccccccHHHHHHHHHHHHhc-CCCcccceeeeeeeCCcceEEEEecCCCCHHHhhcCCC---------------
Q 044022            1 MKFYGHEYHRHTYGSCINNITYAAQM-SHNHILKRIGCCLQTPIPILVFQSVEYGTLRDCIFGAP---------------   64 (241)
Q Consensus         1 iK~~~~~~~~~~~~~~~~e~~~l~~l-~h~~iv~~~~~~~~~~~~~lv~e~~~~~sL~~~l~~~~---------------   64 (241)
                      ||++.........+.+.+|+++++++ +||||+++++++...+..++||||+++|+|.+++....               
T Consensus        58 vK~~~~~~~~~~~~~~~~E~~~l~~l~~h~~i~~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~  137 (313)
T 1t46_A           58 VKMLKPSAHLTEREALMSELKVLSYLGNHMNIVNLLGACTIGGPTLVITEYCCYGDLLNFLRRKRDSFICSKTSPAIMED  137 (313)
T ss_dssp             EEEECTTCCHHHHHHHHHHHHHHHHHCCCTTBCCEEEEECSSSSCEEEEECCTTEEHHHHHHHTTTTC------------
T ss_pred             HHhcCcchhHHHHHHHHHHHHHHhhcccCCCeeeEEEEEecCCCcEEEEecCCCCCHHHHHHhccccccccccccccccc
Confidence            35554444444567899999999999 99999999999999999999999999999999986432               


Q ss_pred             ----c---hHHHHHHHHHHHhchhhcCCCCCceeccCCCCCeeecCCCCeEEeeccCceecCCCCcceeecccccCCCcc
Q 044022           65 ----L---PRLKIASDIVNSLAYLHFGFPRPIVLRNFKTQNILFNEENVAKWFDFLLSISIPEGETHITTDRVIGTRGYS  137 (241)
Q Consensus        65 ----~---~~~~~~~~i~~~l~~lh~~~~~~ivh~dl~~~nil~~~~~~~~l~df~~~~~~~~~~~~~~~~~~~~~~~~~  137 (241)
                          .   ..+.++.+++.||.|||   +.+++|+||||+||+++.++.++|+|||.+................+++.|+
T Consensus       138 ~~~~~~~~~~~~~~~qi~~~l~~lH---~~~i~H~dlkp~Nil~~~~~~~kl~Dfg~~~~~~~~~~~~~~~~~~~~~~y~  214 (313)
T 1t46_A          138 DELALDLEDLLSFSYQVAKGMAFLA---SKNCIHRDLAARNILLTHGRITKICDFGLARDIKNDSNYVVKGNARLPVKWM  214 (313)
T ss_dssp             --CCCCHHHHHHHHHHHHHHHHHHH---HTTCCCSCCSGGGEEEETTTEEEECCCGGGSCTTSCTTSEECSSSEECGGGC
T ss_pred             ccccCCHHHHHHHHHHHHHHHHHHH---HCCeecCCCccceEEEcCCCCEEEccccccccccccccceeccCCCCcceee
Confidence                1   46789999999999999   8999999999999999999999999999998766554433334455778899


Q ss_pred             CcccccccCCCcchhhHHHHHHHHHHHh-cCcccccccccCCCcccchHHHHHHHhhhcccCCCCCCccccCCCchhHHH
Q 044022          138 APEYISICVLNEKSNVFSFGAFLFELLA-GRIHIWDLLKDTHDHGCFFNEYLKNYLEDKRFTGIPAPIIVQDIPCIEKEQ  216 (241)
Q Consensus       138 aPE~~~~~~~~~~~Di~s~G~~~~~~~~-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  216 (241)
                      |||.+.+..++.++||||||+++|+|++ |..||......         ..............     ...        .
T Consensus       215 aPE~~~~~~~~~~~Di~slG~il~ellt~g~~p~~~~~~~---------~~~~~~~~~~~~~~-----~~~--------~  272 (313)
T 1t46_A          215 APESIFNCVYTFESDVWSYGIFLWELFSLGSSPYPGMPVD---------SKFYKMIKEGFRML-----SPE--------H  272 (313)
T ss_dssp             CHHHHHHCCCCHHHHHHHHHHHHHHHHTTTCCSSTTCCSS---------HHHHHHHHHTCCCC-----CCT--------T
T ss_pred             ChHHhcCCCCChHHHHHHHHHHHHHHHhCCCCCCCcccch---------hHHHHHhccCCCCC-----Ccc--------c
Confidence            9999998899999999999999999999 99998652211         11111111111110     011        1


Q ss_pred             HHHHHHHHHHHhccCCCCCCCCCCC
Q 044022          217 QLHASAQLTLECVNNSPEDRPTMVD  241 (241)
Q Consensus       217 ~~~~~~~l~~~cl~~~p~~Rpt~~e  241 (241)
                      .+..+.+++.+||+.||++|||++|
T Consensus       273 ~~~~l~~li~~~l~~dp~~Rps~~e  297 (313)
T 1t46_A          273 APAEMYDIMKTCWDADPLKRPTFKQ  297 (313)
T ss_dssp             SCHHHHHHHHHHTCSSGGGSCCHHH
T ss_pred             CCHHHHHHHHHHcCCCchhCcCHHH
Confidence            2257899999999999999999853


No 50 
>1tki_A Titin; serine kinase, muscle, autoinhibition; 2.00A {Homo sapiens} SCOP: d.144.1.7
Probab=100.00  E-value=5.7e-41  Score=272.98  Aligned_cols=204  Identities=15%  Similarity=0.206  Sum_probs=163.2

Q ss_pred             cHHHHHHHHHHHHhcCCCcccceeeeeeeCCcceEEEEecCCCCHHHhhcCCC--c---hHHHHHHHHHHHhchhhcCCC
Q 044022           12 TYGSCINNITYAAQMSHNHILKRIGCCLQTPIPILVFQSVEYGTLRDCIFGAP--L---PRLKIASDIVNSLAYLHFGFP   86 (241)
Q Consensus        12 ~~~~~~~e~~~l~~l~h~~iv~~~~~~~~~~~~~lv~e~~~~~sL~~~l~~~~--~---~~~~~~~~i~~~l~~lh~~~~   86 (241)
                      ....+.+|++++++++||||+++++++...+..++||||+++++|.+++....  .   ....++.|++.||.|||   +
T Consensus        44 ~~~~~~~E~~~l~~l~hpnIv~~~~~~~~~~~~~lv~e~~~g~~L~~~l~~~~~~~~~~~~~~i~~qi~~al~~lH---~  120 (321)
T 1tki_A           44 DQVLVKKEISILNIARHRNILHLHESFESMEELVMIFEFISGLDIFERINTSAFELNEREIVSYVHQVCEALQFLH---S  120 (321)
T ss_dssp             HHHHHHHHHHHHHHSCCTTBCCEEEEEEETTEEEEEECCCCCCBHHHHHTSSSCCCCHHHHHHHHHHHHHHHHHHH---H
T ss_pred             cHHHHHHHHHHHHhCCCCCCCeEeEEEecCCEEEEEEEeCCCCCHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHH---H
Confidence            35568899999999999999999999999999999999999999999997642  1   46789999999999999   8


Q ss_pred             CCceeccCCCCCeeecC--CCCeEEeeccCceecCCCCcceeecccccCCCccCcccccccCCCcchhhHHHHHHHHHHH
Q 044022           87 RPIVLRNFKTQNILFNE--ENVAKWFDFLLSISIPEGETHITTDRVIGTRGYSAPEYISICVLNEKSNVFSFGAFLFELL  164 (241)
Q Consensus        87 ~~ivh~dl~~~nil~~~--~~~~~l~df~~~~~~~~~~~~~~~~~~~~~~~~~aPE~~~~~~~~~~~Di~s~G~~~~~~~  164 (241)
                      .+++||||||+|||++.  ++.+||+|||.+.........   ....+++.|+|||++.+..++.++||||||+++|+|+
T Consensus       121 ~givH~Dlkp~NIl~~~~~~~~~kl~Dfg~a~~~~~~~~~---~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~~ll  197 (321)
T 1tki_A          121 HNIGHFDIRPENIIYQTRRSSTIKIIEFGQARQLKPGDNF---RLLFTAPEYYAPEVHQHDVVSTATDMWSLGTLVYVLL  197 (321)
T ss_dssp             TTEECCCCCGGGEEESSSSCCCEEECCCTTCEECCTTCEE---EEEESCGGGSCHHHHTTCEECHHHHHHHHHHHHHHHH
T ss_pred             CCCCcCCCCHHHEEEccCCCCCEEEEECCCCeECCCCCcc---ccccCChhhcCcHHhcCCCCCchhhHHHHHHHHHHHH
Confidence            99999999999999987  789999999999876544322   2346899999999999888899999999999999999


Q ss_pred             hcCcccccccccCCCcccchHHHHHHHhhhcccCCCCCCccccCCCchhHHHHHHHHHHHHHHhccCCCCCCCCCCC
Q 044022          165 AGRIHIWDLLKDTHDHGCFFNEYLKNYLEDKRFTGIPAPIIVQDIPCIEKEQQLHASAQLTLECVNNSPEDRPTMVD  241 (241)
Q Consensus       165 ~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~cl~~~p~~Rpt~~e  241 (241)
                      +|..||....         ..+......... ..  .....        ....+..+.+++.+||..||++|||++|
T Consensus       198 ~g~~pf~~~~---------~~~~~~~i~~~~-~~--~~~~~--------~~~~s~~~~~li~~~L~~dp~~Rpt~~e  254 (321)
T 1tki_A          198 SGINPFLAET---------NQQIIENIMNAE-YT--FDEEA--------FKEISIEAMDFVDRLLVKERKSRMTASE  254 (321)
T ss_dssp             HSSCTTCCSS---------HHHHHHHHHHTC-CC--CCHHH--------HTTSCHHHHHHHHTTSCSSGGGSCCHHH
T ss_pred             hCCCCCcCCC---------HHHHHHHHHcCC-CC--CChhh--------hccCCHHHHHHHHHHcCCChhHCcCHHH
Confidence            9999996521         112222222111 10  00000        0122367899999999999999999853


No 51 
>3a8x_A Protein kinase C IOTA type; transferase; HET: TPO; 2.00A {Homo sapiens} PDB: 3a8w_A* 1zrz_A*
Probab=100.00  E-value=5e-40  Score=269.86  Aligned_cols=209  Identities=21%  Similarity=0.235  Sum_probs=161.2

Q ss_pred             ccHHHHHHHHHHHHhc-CCCcccceeeeeeeCCcceEEEEecCCCCHHHhhcCCC----chHHHHHHHHHHHhchhhcCC
Q 044022           11 HTYGSCINNITYAAQM-SHNHILKRIGCCLQTPIPILVFQSVEYGTLRDCIFGAP----LPRLKIASDIVNSLAYLHFGF   85 (241)
Q Consensus        11 ~~~~~~~~e~~~l~~l-~h~~iv~~~~~~~~~~~~~lv~e~~~~~sL~~~l~~~~----~~~~~~~~~i~~~l~~lh~~~   85 (241)
                      ...+.+.+|+.+++++ +||||+++++++...+..++||||+++|+|.+++....    .....++.+|+.||.|||   
T Consensus        51 ~~~~~~~~E~~~l~~~~~hp~iv~l~~~~~~~~~~~lv~e~~~gg~L~~~l~~~~~l~~~~~~~~~~qi~~aL~~LH---  127 (345)
T 3a8x_A           51 EDIDWVQTEKHVFEQASNHPFLVGLHSCFQTESRLFFVIEYVNGGDLMFHMQRQRKLPEEHARFYSAEISLALNYLH---  127 (345)
T ss_dssp             HHHHHHHHHHHHHHHTTTCTTBCCEEEEEECSSEEEEEECCCCSCBHHHHHHHHSSCCHHHHHHHHHHHHHHHHHHH---
T ss_pred             HHHHHHHHHHHHHHhcCCCCccCeEEEEEEeCCEEEEEEeCCCCCcHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHH---
Confidence            3456688999999998 89999999999999999999999999999999886532    246788999999999999   


Q ss_pred             CCCceeccCCCCCeeecCCCCeEEeeccCceecCCCCcceeecccccCCCccCcccccccCCCcchhhHHHHHHHHHHHh
Q 044022           86 PRPIVLRNFKTQNILFNEENVAKWFDFLLSISIPEGETHITTDRVIGTRGYSAPEYISICVLNEKSNVFSFGAFLFELLA  165 (241)
Q Consensus        86 ~~~ivh~dl~~~nil~~~~~~~~l~df~~~~~~~~~~~~~~~~~~~~~~~~~aPE~~~~~~~~~~~Di~s~G~~~~~~~~  165 (241)
                      +++|+||||||+|||++.++.+||+|||++........  ......||+.|+|||++.+..++.++|+||||+++|+|++
T Consensus       128 ~~~ivHrDlkp~NIll~~~g~~kL~DFG~a~~~~~~~~--~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~ell~  205 (345)
T 3a8x_A          128 ERGIIYRDLKLDNVLLDSEGHIKLTDYGMCKEGLRPGD--TTSTFCGTPNYIAPEILRGEDYGFSVDWWALGVLMFEMMA  205 (345)
T ss_dssp             HTTCBCCCCCGGGEEECTTSCEEECCGGGCBCSCCTTC--CBCCCCSCGGGCCHHHHTTCCBCTHHHHHHHHHHHHHHHH
T ss_pred             HCCceecCCCHHHEEECCCCCEEEEeccccccccCCCC--cccccCCCccccCccccCCCCCChHHhHHHHHHHHHHHHh
Confidence            89999999999999999999999999999975432221  1234578999999999998899999999999999999999


Q ss_pred             cCcccccccccCCCcccchHHHHHHHhhhcccCCCCCCccccCCCchhHHHHHHHHHHHHHHhccCCCCCCCCC
Q 044022          166 GRIHIWDLLKDTHDHGCFFNEYLKNYLEDKRFTGIPAPIIVQDIPCIEKEQQLHASAQLTLECVNNSPEDRPTM  239 (241)
Q Consensus       166 g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~cl~~~p~~Rpt~  239 (241)
                      |+.||.............. ............ .     +...        .+..+.+++.+||+.||++|||+
T Consensus       206 g~~pf~~~~~~~~~~~~~~-~~~~~~i~~~~~-~-----~p~~--------~s~~~~~li~~lL~~dP~~R~~~  264 (345)
T 3a8x_A          206 GRSPFDIVGSSDNPDQNTE-DYLFQVILEKQI-R-----IPRS--------LSVKAASVLKSFLNKDPKERLGC  264 (345)
T ss_dssp             SSCTTTTTTC-------CH-HHHHHHHHHCCC-C-----CCTT--------SCHHHHHHHHHHTCSSTTTSTTC
T ss_pred             CCCCcCCcccccccccccH-HHHHHHHHcCCC-C-----CCCC--------CCHHHHHHHHHHhcCCHhHCCCC
Confidence            9999965222111111111 111111111111 1     1111        22578899999999999999997


No 52 
>1p4o_A Insulin-like growth factor I receptor protein; IGF-1R, kinase domain, hormone-growth factor complex; 1.50A {Homo sapiens} SCOP: d.144.1.7 PDB: 1m7n_A 3lvp_A* 3lw0_A* 1jqh_A* 2zm3_A* 3f5p_A* 3i81_A* 2oj9_A* 3nw5_A* 3nw6_A* 3nw7_A* 3o23_A* 3qqu_A* 3d94_A* 1k3a_A* 2z8c_A* 1ir3_A* 1gag_A* 1irk_A 3bu3_A* ...
Probab=100.00  E-value=3.9e-41  Score=273.72  Aligned_cols=215  Identities=18%  Similarity=0.263  Sum_probs=167.1

Q ss_pred             CcccccccccccHHHHHHHHHHHHhcCCCcccceeeeeeeCCcceEEEEecCCCCHHHhhcCC--------------Cch
Q 044022            1 MKFYGHEYHRHTYGSCINNITYAAQMSHNHILKRIGCCLQTPIPILVFQSVEYGTLRDCIFGA--------------PLP   66 (241)
Q Consensus         1 iK~~~~~~~~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~~~~~~~lv~e~~~~~sL~~~l~~~--------------~~~   66 (241)
                      ||.+..........++.+|++++++++||||+++++++...+..++||||+++++|.+++...              ...
T Consensus        60 iK~~~~~~~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~  139 (322)
T 1p4o_A           60 IKTVNEAASMRERIEFLNEASVMKEFNCHHVVRLLGVVSQGQPTLVIMELMTRGDLKSYLRSLRPAMANNPVLAPPSLSK  139 (322)
T ss_dssp             EEECCTTSCHHHHHHHHHHHHHGGGCCCTTBCCEEEEECSSSSCEEEEECCTTCBHHHHHHHHHHHHHHCTTCCCCCHHH
T ss_pred             EEecccccCHHHHHHHHHHHHHHHhcCCCCEeeeEEEEccCCccEEEEEeCCCCcHHHHHHHhchhhccCCCCCCcCHHH
Confidence            355544444445667999999999999999999999999999999999999999999998642              124


Q ss_pred             HHHHHHHHHHHhchhhcCCCCCceeccCCCCCeeecCCCCeEEeeccCceecCCCCcceeecccccCCCccCcccccccC
Q 044022           67 RLKIASDIVNSLAYLHFGFPRPIVLRNFKTQNILFNEENVAKWFDFLLSISIPEGETHITTDRVIGTRGYSAPEYISICV  146 (241)
Q Consensus        67 ~~~~~~~i~~~l~~lh~~~~~~ivh~dl~~~nil~~~~~~~~l~df~~~~~~~~~~~~~~~~~~~~~~~~~aPE~~~~~~  146 (241)
                      .+.++.+++.||.|||   +++++||||||+||+++.++.++|+|||.+................+++.|+|||.+.+..
T Consensus       140 ~~~i~~qi~~~l~~lH---~~~i~H~dikp~NIli~~~~~~kl~Dfg~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~  216 (322)
T 1p4o_A          140 MIQMAGEIADGMAYLN---ANKFVHRDLAARNCMVAEDFTVKIGDFGMTRDIYETDYYRKGGKGLLPVRWMSPESLKDGV  216 (322)
T ss_dssp             HHHHHHHHHHHHHHHH---HTTCBCSCCSGGGEEECTTCCEEECCTTCCCGGGGGGCEEGGGSSEECGGGCCHHHHHHCC
T ss_pred             HHHHHHHHHHHHHHHH---HCCCccCCCccceEEEcCCCeEEECcCccccccccccccccccCCCCCCCccChhhhccCC
Confidence            6788999999999999   8999999999999999999999999999987654333222233445678899999999888


Q ss_pred             CCcchhhHHHHHHHHHHHh-cCcccccccccCCCcccchHHHHHHHhhhcccCCCCCCccccCCCchhHHHHHHHHHHHH
Q 044022          147 LNEKSNVFSFGAFLFELLA-GRIHIWDLLKDTHDHGCFFNEYLKNYLEDKRFTGIPAPIIVQDIPCIEKEQQLHASAQLT  225 (241)
Q Consensus       147 ~~~~~Di~s~G~~~~~~~~-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~  225 (241)
                      ++.++||||||+++|+|++ |..||....         ..+..... ..+.....     ..        ..+..+.+++
T Consensus       217 ~~~~~Di~slG~il~el~~~g~~p~~~~~---------~~~~~~~~-~~~~~~~~-----~~--------~~~~~l~~li  273 (322)
T 1p4o_A          217 FTTYSDVWSFGVVLWEIATLAEQPYQGLS---------NEQVLRFV-MEGGLLDK-----PD--------NCPDMLFELM  273 (322)
T ss_dssp             CCHHHHHHHHHHHHHHHHHTSCCTTTTSC---------HHHHHHHH-HTTCCCCC-----CT--------TCCHHHHHHH
T ss_pred             CCchhhHHHHHHHHHHHHhcCCCccccCC---------HHHHHHHH-HcCCcCCC-----CC--------CCCHHHHHHH
Confidence            9999999999999999999 889985421         11222221 11211111     11        1225788999


Q ss_pred             HHhccCCCCCCCCCCC
Q 044022          226 LECVNNSPEDRPTMVD  241 (241)
Q Consensus       226 ~~cl~~~p~~Rpt~~e  241 (241)
                      .+||+.||++|||+.|
T Consensus       274 ~~~l~~dp~~Rps~~e  289 (322)
T 1p4o_A          274 RMCWQYNPKMRPSFLE  289 (322)
T ss_dssp             HHHTCSSGGGSCCHHH
T ss_pred             HHHcCCCcccCcCHHH
Confidence            9999999999999853


No 53 
>2i1m_A Macrophage colony-stimulating factor 1 receptor; kinase domain, kinase inhibitor complex, transferase; HET: 5CN; 1.80A {Homo sapiens} PDB: 3bea_A* 3lcd_A* 2i0y_A* 2i0v_A* 3dpk_A* 3krj_A* 3krl_A* 2ogv_A 3lco_A*
Probab=100.00  E-value=1.6e-41  Score=277.30  Aligned_cols=215  Identities=20%  Similarity=0.320  Sum_probs=166.8

Q ss_pred             cccccccccccHHHHHHHHHHHHhc-CCCcccceeeeeeeCCcceEEEEecCCCCHHHhhcCC-----------------
Q 044022            2 KFYGHEYHRHTYGSCINNITYAAQM-SHNHILKRIGCCLQTPIPILVFQSVEYGTLRDCIFGA-----------------   63 (241)
Q Consensus         2 K~~~~~~~~~~~~~~~~e~~~l~~l-~h~~iv~~~~~~~~~~~~~lv~e~~~~~sL~~~l~~~-----------------   63 (241)
                      |.+.........+.+.+|+++++++ +||||+++++++...+..++||||+++|+|.+++...                 
T Consensus        82 K~~~~~~~~~~~~~~~~E~~~l~~l~~h~~iv~~~~~~~~~~~~~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~  161 (333)
T 2i1m_A           82 KMLKSTAHADEKEALMSELKIMSHLGQHENIVNLLGACTHGGPVLVITEYCCYGDLLNFLRRKSRVLETDPAFAIANSTA  161 (333)
T ss_dssp             EEECTTCCHHHHHHHHHHHHHHHHHCCCTTBCCEEEEECSSSSCEEEEECCTTEEHHHHHHHHHHHHSCC-------CCC
T ss_pred             HhcccccChHHHHHHHHHHHHHHhhcCCCCeeeEEEEEecCCceEEEEecCCCCcHHHHHHHhccccccccccccccccc
Confidence            4444333334567799999999999 8999999999999999999999999999999998642                 


Q ss_pred             -CchHHHHHHHHHHHhchhhcCCCCCceeccCCCCCeeecCCCCeEEeeccCceecCCCCcceeecccccCCCccCcccc
Q 044022           64 -PLPRLKIASDIVNSLAYLHFGFPRPIVLRNFKTQNILFNEENVAKWFDFLLSISIPEGETHITTDRVIGTRGYSAPEYI  142 (241)
Q Consensus        64 -~~~~~~~~~~i~~~l~~lh~~~~~~ivh~dl~~~nil~~~~~~~~l~df~~~~~~~~~~~~~~~~~~~~~~~~~aPE~~  142 (241)
                       ....+.++.+++.||.|||   +.+++||||||+||+++.++.++|+|||++................+++.|+|||.+
T Consensus       162 ~~~~~~~~~~qi~~~l~~lH---~~~ivH~Dlkp~NIl~~~~~~~kl~Dfg~~~~~~~~~~~~~~~~~~~~~~y~aPE~~  238 (333)
T 2i1m_A          162 STRDLLHFSSQVAQGMAFLA---SKNCIHRDVAARNVLLTNGHVAKIGDFGLARDIMNDSNYIVKGNARLPVKWMAPESI  238 (333)
T ss_dssp             CHHHHHHHHHHHHHHHHHHH---HTTEECSCCSGGGCEEEGGGEEEBCCCGGGCCGGGCTTSEECSSCEECGGGSCHHHH
T ss_pred             CHHHHHHHHHHHHHHHHHHh---cCCcccCCcccceEEECCCCeEEECccccccccccccceeecCCCCCCccccCHHHh
Confidence             1146789999999999999   899999999999999999999999999999765444333333445577889999999


Q ss_pred             cccCCCcchhhHHHHHHHHHHHh-cCcccccccccCCCcccchHHHHHHHhhhcccCCCCCCccccCCCchhHHHHHHHH
Q 044022          143 SICVLNEKSNVFSFGAFLFELLA-GRIHIWDLLKDTHDHGCFFNEYLKNYLEDKRFTGIPAPIIVQDIPCIEKEQQLHAS  221 (241)
Q Consensus       143 ~~~~~~~~~Di~s~G~~~~~~~~-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  221 (241)
                      .+..++.++||||||+++|+|++ |..||......         ...............     ...        .+..+
T Consensus       239 ~~~~~~~~~Di~slG~il~el~t~g~~p~~~~~~~---------~~~~~~~~~~~~~~~-----~~~--------~~~~l  296 (333)
T 2i1m_A          239 FDCVYTVQSDVWSYGILLWEIFSLGLNPYPGILVN---------SKFYKLVKDGYQMAQ-----PAF--------APKNI  296 (333)
T ss_dssp             HHCCCCHHHHHHHHHHHHHHHTTTSCCSSTTCCSS---------HHHHHHHHHTCCCCC-----CTT--------CCHHH
T ss_pred             ccCCCChHHHHHHHHHHHHHHHcCCCCCCcccchh---------HHHHHHHhcCCCCCC-----CCC--------CCHHH
Confidence            98899999999999999999998 99998652111         111122222211111     111        12578


Q ss_pred             HHHHHHhccCCCCCCCCCCC
Q 044022          222 AQLTLECVNNSPEDRPTMVD  241 (241)
Q Consensus       222 ~~l~~~cl~~~p~~Rpt~~e  241 (241)
                      .+++.+||+.||++|||++|
T Consensus       297 ~~li~~~l~~~p~~Rps~~~  316 (333)
T 2i1m_A          297 YSIMQACWALEPTHRPTFQQ  316 (333)
T ss_dssp             HHHHHHHTCSSGGGSCCHHH
T ss_pred             HHHHHHHhccChhhCcCHHH
Confidence            89999999999999999853


No 54 
>1fot_A TPK1 delta, CAMP-dependent protein kinase type 1; open conformation, transferase; HET: TPO; 2.80A {Saccharomyces cerevisiae} SCOP: d.144.1.7
Probab=100.00  E-value=7.2e-40  Score=266.05  Aligned_cols=196  Identities=20%  Similarity=0.288  Sum_probs=160.3

Q ss_pred             ccHHHHHHHHHHHHhcCCCcccceeeeeeeCCcceEEEEecCCCCHHHhhcCCCc----hHHHHHHHHHHHhchhhcCCC
Q 044022           11 HTYGSCINNITYAAQMSHNHILKRIGCCLQTPIPILVFQSVEYGTLRDCIFGAPL----PRLKIASDIVNSLAYLHFGFP   86 (241)
Q Consensus        11 ~~~~~~~~e~~~l~~l~h~~iv~~~~~~~~~~~~~lv~e~~~~~sL~~~l~~~~~----~~~~~~~~i~~~l~~lh~~~~   86 (241)
                      ...+.+.+|+.+++.++||||+++++++...+..++||||+++|+|.+++.....    ....++.+++.||.|||   +
T Consensus        48 ~~~~~~~~E~~~l~~l~hp~Iv~~~~~~~~~~~~~lv~e~~~gg~L~~~l~~~~~~~~~~~~~~~~qi~~aL~~LH---~  124 (318)
T 1fot_A           48 KQVEHTNDERLMLSIVTHPFIIRMWGTFQDAQQIFMIMDYIEGGELFSLLRKSQRFPNPVAKFYAAEVCLALEYLH---S  124 (318)
T ss_dssp             TCHHHHHHHHHHHHSCCBTTBCCEEEEEECSSEEEEEECCCCSCBHHHHHHHTSSCCHHHHHHHHHHHHHHHHHHH---T
T ss_pred             hHHHHHHHHHHHHhhCCCCCCceEeEEEEeCCEEEEEEeCCCCCCHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHH---H
Confidence            3567788999999999999999999999999999999999999999999865422    46778999999999999   9


Q ss_pred             CCceeccCCCCCeeecCCCCeEEeeccCceecCCCCcceeecccccCCCccCcccccccCCCcchhhHHHHHHHHHHHhc
Q 044022           87 RPIVLRNFKTQNILFNEENVAKWFDFLLSISIPEGETHITTDRVIGTRGYSAPEYISICVLNEKSNVFSFGAFLFELLAG  166 (241)
Q Consensus        87 ~~ivh~dl~~~nil~~~~~~~~l~df~~~~~~~~~~~~~~~~~~~~~~~~~aPE~~~~~~~~~~~Di~s~G~~~~~~~~g  166 (241)
                      ++++||||||+|||++.++.+||+|||++.......     ....||+.|+|||++.+..++.++|+||||+++|+|++|
T Consensus       125 ~~ivHrDlkp~NIll~~~g~~kL~Dfg~a~~~~~~~-----~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~ell~g  199 (318)
T 1fot_A          125 KDIIYRDLKPENILLDKNGHIKITDFGFAKYVPDVT-----YTLCGTPDYIAPEVVSTKPYNKSIDWWSFGILIYEMLAG  199 (318)
T ss_dssp             TTEECCCCCGGGEEECTTSCEEECCCSSCEECSSCB-----CCCCSCTTTCCHHHHTTCCBCTTHHHHHHHHHHHHHHHS
T ss_pred             CCccccCCChheEEEcCCCCEEEeecCcceecCCcc-----ccccCCccccCHhHhcCCCCCcccchhhhHHHHHHHHhC
Confidence            999999999999999999999999999998754322     335789999999999988999999999999999999999


Q ss_pred             CcccccccccCCCcccchHHHHHHHhhhcccCCCCCCccccCCCchhHHHHHHHHHHHHHHhccCCCCCCCC
Q 044022          167 RIHIWDLLKDTHDHGCFFNEYLKNYLEDKRFTGIPAPIIVQDIPCIEKEQQLHASAQLTLECVNNSPEDRPT  238 (241)
Q Consensus       167 ~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~cl~~~p~~Rpt  238 (241)
                      ..||....         ..+......... . .     ....        .+..+.+++.+||..||++||+
T Consensus       200 ~~pf~~~~---------~~~~~~~i~~~~-~-~-----~p~~--------~~~~~~~li~~lL~~dp~~R~~  247 (318)
T 1fot_A          200 YTPFYDSN---------TMKTYEKILNAE-L-R-----FPPF--------FNEDVKDLLSRLITRDLSQRLG  247 (318)
T ss_dssp             SCTTCCSS---------HHHHHHHHHHCC-C-C-----CCTT--------SCHHHHHHHHHHTCSCTTTCTT
T ss_pred             CCCCCCCC---------HHHHHHHHHhCC-C-C-----CCCC--------CCHHHHHHHHHHhccCHHHcCC
Confidence            99996521         112222221111 0 1     1111        2257889999999999999993


No 55 
>3kex_A Receptor tyrosine-protein kinase ERBB-3; kinase domain, inactive kinase, HER3, ATP-binding, cell membrane, membrane, nucleotide-binding; HET: ANP; 2.80A {Homo sapiens} PDB: 3lmg_A*
Probab=100.00  E-value=7.3e-41  Score=272.76  Aligned_cols=213  Identities=20%  Similarity=0.270  Sum_probs=163.0

Q ss_pred             cccccccccccHHHHHHHHHHHHhcCCCcccceeeeeeeCCcceEEEEecCCCCHHHhhcCCC-----chHHHHHHHHHH
Q 044022            2 KFYGHEYHRHTYGSCINNITYAAQMSHNHILKRIGCCLQTPIPILVFQSVEYGTLRDCIFGAP-----LPRLKIASDIVN   76 (241)
Q Consensus         2 K~~~~~~~~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~~~~~~~lv~e~~~~~sL~~~l~~~~-----~~~~~~~~~i~~   76 (241)
                      |.+...........+.+|+.++++++||||+++++++. .+..++|+||+.+|+|.+++....     .....++.+++.
T Consensus        48 K~~~~~~~~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~-~~~~~~v~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~qi~~  126 (325)
T 3kex_A           48 KVIEDKSGRQSFQAVTDHMLAIGSLDHAHIVRLLGLCP-GSSLQLVTQYLPLGSLLDHVRQHRGALGPQLLLNWGVQIAK  126 (325)
T ss_dssp             EEECCTTSCSCBCSCCHHHHHHHTCCCTTBCCEEEEEC-BSSEEEEEECCTTCBSHHHHHSSGGGSCTTHHHHHHHHHHH
T ss_pred             EeccccccHHHHHHHHHHHHHHhcCCCCCcCeEEEEEc-CCccEEEEEeCCCCCHHHHHHHccccCCHHHHHHHHHHHHH
Confidence            34434444455677889999999999999999999986 456889999999999999986642     257889999999


Q ss_pred             HhchhhcCCCCCceeccCCCCCeeecCCCCeEEeeccCceecCCCCcceeecccccCCCccCcccccccCCCcchhhHHH
Q 044022           77 SLAYLHFGFPRPIVLRNFKTQNILFNEENVAKWFDFLLSISIPEGETHITTDRVIGTRGYSAPEYISICVLNEKSNVFSF  156 (241)
Q Consensus        77 ~l~~lh~~~~~~ivh~dl~~~nil~~~~~~~~l~df~~~~~~~~~~~~~~~~~~~~~~~~~aPE~~~~~~~~~~~Di~s~  156 (241)
                      ||.|||   +.+++||||||+|||++.++.+||+|||++................++..|+|||++.+..++.++|||||
T Consensus       127 ~l~~lH---~~~ivH~Dikp~Nil~~~~~~~kl~Dfg~a~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~sl  203 (325)
T 3kex_A          127 GMYYLE---EHGMVHRNLAARNVLLKSPSQVQVADFGVADLLPPDDKQLLYSEAKTPIKWMALESIHFGKYTHQSDVWSY  203 (325)
T ss_dssp             HHHHHH---HTTCCCSCCSSTTEEESSSSCEEECSCSGGGGSCCCTTCCC-----CCTTTSCHHHHHHCCCCHHHHHHHH
T ss_pred             HHHHHH---hCCCCCCccchheEEECCCCeEEECCCCcccccCcccccccccCCCCcccccChHHhccCCCChhhHhHHh
Confidence            999999   89999999999999999999999999999987655443333344567889999999998899999999999


Q ss_pred             HHHHHHHHh-cCcccccccccCCCcccchHHHHHHHhhhcccCCCCCCccccCCCchhHHHHHHHHHHHHHHhccCCCCC
Q 044022          157 GAFLFELLA-GRIHIWDLLKDTHDHGCFFNEYLKNYLEDKRFTGIPAPIIVQDIPCIEKEQQLHASAQLTLECVNNSPED  235 (241)
Q Consensus       157 G~~~~~~~~-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~cl~~~p~~  235 (241)
                      |+++|++++ |..||.....         .+..... ........+.     .        .+..+.+++.+||+.||++
T Consensus       204 G~~l~el~~~g~~p~~~~~~---------~~~~~~~-~~~~~~~~~~-----~--------~~~~~~~li~~~l~~dp~~  260 (325)
T 3kex_A          204 GVTVWELMTFGAEPYAGLRL---------AEVPDLL-EKGERLAQPQ-----I--------CTIDVYMVMVKCWMIDENI  260 (325)
T ss_dssp             HHHHHHHHTTSCCTTTTSCT---------THHHHHH-HTTCBCCCCT-----T--------BCTTTTHHHHHHTCSCTTT
T ss_pred             HHHHHHHHhCCCCCccccCH---------HHHHHHH-HcCCCCCCCC-----c--------CcHHHHHHHHHHcCCChhh
Confidence            999999999 9999965211         1111111 1111111111     1        1135778999999999999


Q ss_pred             CCCCCC
Q 044022          236 RPTMVD  241 (241)
Q Consensus       236 Rpt~~e  241 (241)
                      |||+.|
T Consensus       261 Rps~~e  266 (325)
T 3kex_A          261 RPTFKE  266 (325)
T ss_dssp             SCCHHH
T ss_pred             CcCHHH
Confidence            999753


No 56 
>1k9a_A Carboxyl-terminal SRC kinase; COOH-terminal SRC kinase, CSK, SFK, signal transduction, SH2, SH3, SRC homology, tyrosine kinase; 2.50A {Rattus norvegicus} SCOP: b.34.2.1 d.93.1.1 d.144.1.7 PDB: 1jeg_A
Probab=100.00  E-value=1.2e-40  Score=282.61  Aligned_cols=199  Identities=23%  Similarity=0.315  Sum_probs=158.3

Q ss_pred             cHHHHHHHHHHHHhcCCCcccceeeeeeeCC-cceEEEEecCCCCHHHhhcCCC------chHHHHHHHHHHHhchhhcC
Q 044022           12 TYGSCINNITYAAQMSHNHILKRIGCCLQTP-IPILVFQSVEYGTLRDCIFGAP------LPRLKIASDIVNSLAYLHFG   84 (241)
Q Consensus        12 ~~~~~~~e~~~l~~l~h~~iv~~~~~~~~~~-~~~lv~e~~~~~sL~~~l~~~~------~~~~~~~~~i~~~l~~lh~~   84 (241)
                      ..+.|.+|++++++++||||+++++++...+ ..++||||+++|+|.+++....      ...+.++.|++.||.|||  
T Consensus       229 ~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~~iv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~qi~~~l~~LH--  306 (450)
T 1k9a_A          229 TAQAFLAEASVMTQLRHSNLVQLLGVIVEEKGGLYIVTEYMAKGSLVDYLRSRGRSVLGGDCLLKFSLDVCEAMEYLE--  306 (450)
T ss_dssp             TSHHHHHHHHHHHTCCCTTBCCEEEEEECTTSCEEEEEECCTTCBHHHHHHHHCTTTCCHHHHHHHHHHHHHHHHHHH--
T ss_pred             HHHHHHHHHHHHHhccCCCEEEEEEEEEcCCCceEEEEEecCCCcHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHHH--
Confidence            4678999999999999999999999987765 7899999999999999986532      146789999999999999  


Q ss_pred             CCCCceeccCCCCCeeecCCCCeEEeeccCceecCCCCcceeecccccCCCccCcccccccCCCcchhhHHHHHHHHHHH
Q 044022           85 FPRPIVLRNFKTQNILFNEENVAKWFDFLLSISIPEGETHITTDRVIGTRGYSAPEYISICVLNEKSNVFSFGAFLFELL  164 (241)
Q Consensus        85 ~~~~ivh~dl~~~nil~~~~~~~~l~df~~~~~~~~~~~~~~~~~~~~~~~~~aPE~~~~~~~~~~~Di~s~G~~~~~~~  164 (241)
                       +++++||||||+|||++.++.+||+|||++.......     ....++..|+|||++.+..++.++||||||+++|+|+
T Consensus       307 -~~~ivHrDlkp~Nill~~~~~~kl~DfG~a~~~~~~~-----~~~~~~~~y~aPE~~~~~~~~~~sDvwslG~~l~el~  380 (450)
T 1k9a_A          307 -GNNFVHRDLAARNVLVSEDNVAKVSDFGLTKEASSTQ-----DTGKLPVKWTAPEALREKKFSTKSDVWSFGILLWEIY  380 (450)
T ss_dssp             -HTTEECSCCCGGGEEECTTSCEEECCCTTCEECC-----------CCCTTTSCHHHHHSSCCCHHHHHHHHHHHHHHHH
T ss_pred             -hCCeeCCCCCHhhEEECCCCCEEEeeCCCcccccccc-----cCCCCCcceeCHHHhcCCCCCcHHHHHHHHHHHHHHH
Confidence             8999999999999999999999999999998544321     2235678899999999999999999999999999999


Q ss_pred             h-cCcccccccccCCCcccchHHHHHHHhhhcccCCCCCCccccCCCchhHHHHHHHHHHHHHHhccCCCCCCCCCCC
Q 044022          165 A-GRIHIWDLLKDTHDHGCFFNEYLKNYLEDKRFTGIPAPIIVQDIPCIEKEQQLHASAQLTLECVNNSPEDRPTMVD  241 (241)
Q Consensus       165 ~-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~cl~~~p~~Rpt~~e  241 (241)
                      + |..||......         +..... ..+.....     ..        .++..+.++|.+||+.||++|||+.|
T Consensus       381 t~g~~P~~~~~~~---------~~~~~i-~~~~~~~~-----p~--------~~~~~l~~li~~cl~~dp~~Rpt~~~  435 (450)
T 1k9a_A          381 SFGRVPYPRIPLK---------DVVPRV-EKGYKMDA-----PD--------GCPPAVYDVMKNCWHLDAATRPTFLQ  435 (450)
T ss_dssp             TTTCCSSTTSCTT---------THHHHH-HTTCCCCC-----CT--------TCCHHHHHHHHHHTCSSGGGSCCHHH
T ss_pred             hCCCCCCCCCCHH---------HHHHHH-HcCCCCCC-----CC--------cCCHHHHHHHHHHcCCChhHCcCHHH
Confidence            8 99999653211         111111 11211111     11        22367899999999999999999753


No 57 
>3qd2_B Eukaryotic translation initiation factor 2-alpha; EIF2A kinase, phosphoryalation, gene regulation; HET: TPO; 2.81A {Mus musculus}
Probab=100.00  E-value=9.4e-41  Score=272.20  Aligned_cols=213  Identities=23%  Similarity=0.313  Sum_probs=164.1

Q ss_pred             CcccccccccccHHHHHHHHHHHHhcCCCcccceeeeeeeCC--------------------------------------
Q 044022            1 MKFYGHEYHRHTYGSCINNITYAAQMSHNHILKRIGCCLQTP--------------------------------------   42 (241)
Q Consensus         1 iK~~~~~~~~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~~~~--------------------------------------   42 (241)
                      ||++.........+.+.+|++++++++||||++++++|...+                                      
T Consensus        36 vK~~~~~~~~~~~~~~~~E~~~l~~l~hpniv~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  115 (332)
T 3qd2_B           36 IKRIRLPNRELAREKVMREVKALAKLEHPGIVRYFNAWLETPPEKWQEEMDEIWLKDESTDWPLSSPSPMDAPSVKIRRM  115 (332)
T ss_dssp             EEEEECCSTTTHHHHHHHHHHHHTSCCCTTBCCEEEEEEECCSCHHHHHHHC----------------------------
T ss_pred             EEEeecCCchhHHHHHHHHHHHHHhCCCCCEeeEEEEEEEeccchhhhhhhhhhhccccccccccCCCcccccccceeec
Confidence            455554444456778999999999999999999999986543                                      


Q ss_pred             -------------------cceEEEEecCCCCHHHhhcCCCc-------hHHHHHHHHHHHhchhhcCCCCCceeccCCC
Q 044022           43 -------------------IPILVFQSVEYGTLRDCIFGAPL-------PRLKIASDIVNSLAYLHFGFPRPIVLRNFKT   96 (241)
Q Consensus        43 -------------------~~~lv~e~~~~~sL~~~l~~~~~-------~~~~~~~~i~~~l~~lh~~~~~~ivh~dl~~   96 (241)
                                         ..++||||+++++|.+++.....       ....++.|++.||.|||   +.+++||||||
T Consensus       116 ~~~~~~~~~~~~~~~~~~~~~~lv~e~~~~~~L~~~~~~~~~~~~~~~~~~~~i~~qi~~aL~~LH---~~~ivH~Dlkp  192 (332)
T 3qd2_B          116 DPFSTKNTVGQLQPSSPKVYLYIQMQLCRKENLKDWMNRRCSLEDREHGVCLHIFIQIAEAVEFLH---SKGLMHRDLKP  192 (332)
T ss_dssp             ----------------CCCEEEEEEECCCSSCHHHHHHTCCSGGGSCHHHHHHHHHHHHHHHHHHH---HTTEECCCCCG
T ss_pred             cccCcccccccccCCCCCceEEEEEEecCCCCHHHHHhcccCccchhhHHHHHHHHHHHHHHHHHH---hCCeeecCCCc
Confidence                               27999999999999999976532       25789999999999999   89999999999


Q ss_pred             CCeeecCCCCeEEeeccCceecCCCCcc----------eeecccccCCCccCcccccccCCCcchhhHHHHHHHHHHHhc
Q 044022           97 QNILFNEENVAKWFDFLLSISIPEGETH----------ITTDRVIGTRGYSAPEYISICVLNEKSNVFSFGAFLFELLAG  166 (241)
Q Consensus        97 ~nil~~~~~~~~l~df~~~~~~~~~~~~----------~~~~~~~~~~~~~aPE~~~~~~~~~~~Di~s~G~~~~~~~~g  166 (241)
                      +||+++.++.+||+|||.+.........          .......||+.|+|||.+.+..++.++||||||+++|+|++|
T Consensus       193 ~NIll~~~~~~kL~DfG~a~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Di~slG~il~el~~~  272 (332)
T 3qd2_B          193 SNIFFTMDDVVKVGDFGLVTAMDQDEEEQTVLTPMPAYATHTGQVGTKLYMSPEQIHGNNYSHKVDIFSLGLILFELLYS  272 (332)
T ss_dssp             GGEEECTTCCEEECCCTTCEECSCC--------------CCCSCC-CGGGSCHHHHHCCCCCTHHHHHHHHHHHHHHHSC
T ss_pred             ccEEEeCCCCEEEeecCcccccccchhhccccccccccccccccCCCcCccChHHhcCCCCcchhhHHHHHHHHHHHHHc
Confidence            9999999999999999999876543211          112334689999999999988999999999999999999999


Q ss_pred             CcccccccccCCCcccchHHHHHHHhhhcccCCCCCCccccCCCchhHHHHHHHHHHHHHHhccCCCCCCCCCCC
Q 044022          167 RIHIWDLLKDTHDHGCFFNEYLKNYLEDKRFTGIPAPIIVQDIPCIEKEQQLHASAQLTLECVNNSPEDRPTMVD  241 (241)
Q Consensus       167 ~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~cl~~~p~~Rpt~~e  241 (241)
                      ..|+...           ....... ...     ..        .......++.+.+++.+||+.||++|||++|
T Consensus       273 ~~~~~~~-----------~~~~~~~-~~~-----~~--------~~~~~~~~~~~~~li~~~l~~~p~~Rps~~~  322 (332)
T 3qd2_B          273 FSTQMER-----------VRIITDV-RNL-----KF--------PLLFTQKYPQEHMMVQDMLSPSPTERPEATD  322 (332)
T ss_dssp             CCCHHHH-----------HHHHHHH-HTT-----CC--------CHHHHHHCHHHHHHHHHHHCSSGGGSCCHHH
T ss_pred             CCChhHH-----------HHHHHHh-hcc-----CC--------CcccccCChhHHHHHHHHccCCCCcCCCHHH
Confidence            8776331           0111111 011     00        0112244467789999999999999999853


No 58 
>4fr4_A YANK1, serine/threonine-protein kinase 32A; structural genomics, structural genomics consortium, SGC, TR; HET: STU; 2.29A {Homo sapiens}
Probab=100.00  E-value=1.3e-39  Score=270.42  Aligned_cols=203  Identities=19%  Similarity=0.235  Sum_probs=162.4

Q ss_pred             cccHHHHHHHHHHHHhcCCCcccceeeeeeeCCcceEEEEecCCCCHHHhhcCCCc----hHHHHHHHHHHHhchhhcCC
Q 044022           10 RHTYGSCINNITYAAQMSHNHILKRIGCCLQTPIPILVFQSVEYGTLRDCIFGAPL----PRLKIASDIVNSLAYLHFGF   85 (241)
Q Consensus        10 ~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~~~~~~~lv~e~~~~~sL~~~l~~~~~----~~~~~~~~i~~~l~~lh~~~   85 (241)
                      ....+.+.+|++++++++|||||+++++|...+..++||||+.+|+|.+++.....    ....++.+++.||.|||   
T Consensus        56 ~~~~~~~~~E~~il~~l~hp~Iv~l~~~~~~~~~~~lv~e~~~gg~L~~~l~~~~~l~~~~~~~~~~qi~~aL~~LH---  132 (384)
T 4fr4_A           56 RNEVRNVFKELQIMQGLEHPFLVNLWYSFQDEEDMFMVVDLLLGGDLRYHLQQNVHFKEETVKLFICELVMALDYLQ---  132 (384)
T ss_dssp             TTCHHHHHHHHHHHHTCCCTTBCCEEEEEECSSEEEEEECCCTTEEHHHHHHTTCCCCHHHHHHHHHHHHHHHHHHH---
T ss_pred             HHHHHHHHHHHHHHHhCCCCCCCcEEEEEEeCCEEEEEEecCCCCcHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHH---
Confidence            34567889999999999999999999999999999999999999999999876532    46788999999999999   


Q ss_pred             CCCceeccCCCCCeeecCCCCeEEeeccCceecCCCCcceeecccccCCCccCcccccc---cCCCcchhhHHHHHHHHH
Q 044022           86 PRPIVLRNFKTQNILFNEENVAKWFDFLLSISIPEGETHITTDRVIGTRGYSAPEYISI---CVLNEKSNVFSFGAFLFE  162 (241)
Q Consensus        86 ~~~ivh~dl~~~nil~~~~~~~~l~df~~~~~~~~~~~~~~~~~~~~~~~~~aPE~~~~---~~~~~~~Di~s~G~~~~~  162 (241)
                      +.+|+||||||+|||++.++.++|+|||++........   .....||+.|+|||++..   ..++.++||||||+++|+
T Consensus       133 ~~givHrDlkp~NIll~~~g~vkL~DFG~a~~~~~~~~---~~~~~gt~~Y~aPE~~~~~~~~~~~~~~DiwSlG~il~e  209 (384)
T 4fr4_A          133 NQRIIHRDMKPDNILLDEHGHVHITDFNIAAMLPRETQ---ITTMAGTKPYMAPEMFSSRKGAGYSFAVDWWSLGVTAYE  209 (384)
T ss_dssp             HTTEECCCCSGGGEEECTTSCEEECCCTTCEECCTTCC---BCCCCSCGGGCCGGGTCCCSSCCBCTTHHHHHHHHHHHH
T ss_pred             HCCceeccCcHHHeEECCCCCEEEeccceeeeccCCCc---eeccCCCccccCCeeeccCCCCCCCccceeechHHHHHH
Confidence            89999999999999999999999999999987654322   234579999999999974   358899999999999999


Q ss_pred             HHhcCcccccccccCCCcccchHHHHHHHhhhcccCCCCCCccccCCCchhHHHHHHHHHHHHHHhccCCCCCCCCC
Q 044022          163 LLAGRIHIWDLLKDTHDHGCFFNEYLKNYLEDKRFTGIPAPIIVQDIPCIEKEQQLHASAQLTLECVNNSPEDRPTM  239 (241)
Q Consensus       163 ~~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~cl~~~p~~Rpt~  239 (241)
                      |++|+.||......      ...+.........  ...     ..        ..+..+.+|+.+||+.||++||++
T Consensus       210 lltG~~Pf~~~~~~------~~~~~~~~~~~~~--~~~-----p~--------~~s~~~~~li~~lL~~dP~~R~s~  265 (384)
T 4fr4_A          210 LLRGRRPYHIRSST------SSKEIVHTFETTV--VTY-----PS--------AWSQEMVSLLKKLLEPNPDQRFSQ  265 (384)
T ss_dssp             HHHSSCSSCCCTTS------CHHHHHHHHHHCC--CCC-----CT--------TSCHHHHHHHHHHSCSSGGGSCCS
T ss_pred             HHhCCCCCCCCCCc------cHHHHHHHHhhcc--cCC-----CC--------cCCHHHHHHHHHHhcCCHhHhccc
Confidence            99999999642111      1122222211111  011     11        122578999999999999999983


No 59 
>2zv2_A Calcium/calmodulin-dependent protein kinase kinas; beta, camkk2, E.C.2.7.11.17, phosphorylation, AMPKK, metabolism, binding, calmodulin-binding; HET: 609; 2.40A {Homo sapiens}
Probab=100.00  E-value=3.6e-40  Score=265.41  Aligned_cols=202  Identities=20%  Similarity=0.293  Sum_probs=158.2

Q ss_pred             HHHHHHHHHHHHhcCCCcccceeeeeee--CCcceEEEEecCCCCHHHhhcCCCc---hHHHHHHHHHHHhchhhcCCCC
Q 044022           13 YGSCINNITYAAQMSHNHILKRIGCCLQ--TPIPILVFQSVEYGTLRDCIFGAPL---PRLKIASDIVNSLAYLHFGFPR   87 (241)
Q Consensus        13 ~~~~~~e~~~l~~l~h~~iv~~~~~~~~--~~~~~lv~e~~~~~sL~~~l~~~~~---~~~~~~~~i~~~l~~lh~~~~~   87 (241)
                      .+.+.+|++++++++||||+++++++..  .+..++||||+++++|.+++.....   ....++.|++.||.|||   +.
T Consensus        80 ~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~~~lv~e~~~~~~l~~~~~~~~~~~~~~~~~~~qi~~~l~~lH---~~  156 (298)
T 2zv2_A           80 IEQVYQEIAILKKLDHPNVVKLVEVLDDPNEDHLYMVFELVNQGPVMEVPTLKPLSEDQARFYFQDLIKGIEYLH---YQ  156 (298)
T ss_dssp             -CHHHHHHHHHHTCCCTTBCCEEEEEECSSSSEEEEEEECCTTCBSCCSSCSSCCCHHHHHHHHHHHHHHHHHHH---HT
T ss_pred             HHHHHHHHHHHHhCCCCCCCeEEEEEEcCCCCEEEEEEecCCCCcHHHHhhcCCCCHHHHHHHHHHHHHHHHHHH---HC
Confidence            4678999999999999999999999986  5678999999999999987765433   46789999999999999   89


Q ss_pred             CceeccCCCCCeeecCCCCeEEeeccCceecCCCCcceeecccccCCCccCcccccccC---CCcchhhHHHHHHHHHHH
Q 044022           88 PIVLRNFKTQNILFNEENVAKWFDFLLSISIPEGETHITTDRVIGTRGYSAPEYISICV---LNEKSNVFSFGAFLFELL  164 (241)
Q Consensus        88 ~ivh~dl~~~nil~~~~~~~~l~df~~~~~~~~~~~~~~~~~~~~~~~~~aPE~~~~~~---~~~~~Di~s~G~~~~~~~  164 (241)
                      +++||||||+||+++.++.+||+|||++.........  .....||+.|+|||.+.+..   .+.++||||||+++|+|+
T Consensus       157 ~ivH~Dlkp~Nil~~~~~~~kl~Dfg~~~~~~~~~~~--~~~~~gt~~y~aPE~~~~~~~~~~~~~~Di~slG~~l~~l~  234 (298)
T 2zv2_A          157 KIIHRDIKPSNLLVGEDGHIKIADFGVSNEFKGSDAL--LSNTVGTPAFMAPESLSETRKIFSGKALDVWAMGVTLYCFV  234 (298)
T ss_dssp             TEECCCCCGGGEEECTTSCEEECCCTTCEECSSSSCE--ECCCCSCGGGCCGGGCCTTCCCEESHHHHHHHHHHHHHHHH
T ss_pred             CeeccCCCHHHEEECCCCCEEEecCCCcccccccccc--ccCCcCCccccChhhhccCCCCCCCchhhhHhHHHHHHHHH
Confidence            9999999999999999999999999999876543322  23457899999999997654   367899999999999999


Q ss_pred             hcCcccccccccCCCcccchHHHHHHHhhhcccCCCCCCccccCCCchhHHHHHHHHHHHHHHhccCCCCCCCCCCC
Q 044022          165 AGRIHIWDLLKDTHDHGCFFNEYLKNYLEDKRFTGIPAPIIVQDIPCIEKEQQLHASAQLTLECVNNSPEDRPTMVD  241 (241)
Q Consensus       165 ~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~cl~~~p~~Rpt~~e  241 (241)
                      +|+.||...         .......... .... ..+.   ...        .++.+.+++.+||+.||++|||++|
T Consensus       235 ~g~~pf~~~---------~~~~~~~~~~-~~~~-~~~~---~~~--------~~~~l~~li~~~l~~dp~~R~s~~e  289 (298)
T 2zv2_A          235 FGQCPFMDE---------RIMCLHSKIK-SQAL-EFPD---QPD--------IAEDLKDLITRMLDKNPESRIVVPE  289 (298)
T ss_dssp             HSSCSSCCS---------SHHHHHHHHH-HCCC-CCCS---SSC--------CCHHHHHHHHHHTCSCTTTSCCHHH
T ss_pred             HCCCCCCCc---------cHHHHHHHHh-cccC-CCCC---ccc--------cCHHHHHHHHHHhhcChhhCCCHHH
Confidence            999999541         1111111111 1111 1111   111        2257899999999999999999753


No 60 
>3gni_B Strad alpha; kinase fold, pseudokinase, alpha helical repeat protein, ADA protein, ATP-binding, cell cycle, kinase, nucleotide-bindin nucleus; HET: ATP CIT; 2.35A {Homo sapiens} PDB: 2wtk_B*
Probab=100.00  E-value=9.8e-41  Score=278.31  Aligned_cols=169  Identities=18%  Similarity=0.208  Sum_probs=140.0

Q ss_pred             Ccccccccc-cccHHHHHHHHHHHHhcCCCcccceeeeeeeCCcceEEEEecCCCCHHHhhcCC---C---chHHHHHHH
Q 044022            1 MKFYGHEYH-RHTYGSCINNITYAAQMSHNHILKRIGCCLQTPIPILVFQSVEYGTLRDCIFGA---P---LPRLKIASD   73 (241)
Q Consensus         1 iK~~~~~~~-~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~~~~~~~lv~e~~~~~sL~~~l~~~---~---~~~~~~~~~   73 (241)
                      ||++..+.. ....+.+.+|++++++++|||||++++++...+..++||||+++|+|.+++...   .   .....++.|
T Consensus        57 vK~~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~q  136 (389)
T 3gni_B           57 VRRINLEACSNEMVTFLQGELHVSKLFNHPNIVPYRATFIADNELWVVTSFMAYGSAKDLICTHFMDGMNELAIAYILQG  136 (389)
T ss_dssp             EEEEEGGGSCHHHHHHHHHHHHHHHHCCCTTBCCEEEEEEETTEEEEEEECCTTCBHHHHHHHTCTTCCCHHHHHHHHHH
T ss_pred             EEEecccccChHHHHHHHHHHHHHHhCCCCCCCcEeEEEEECCEEEEEEEccCCCCHHHHHhhhcccCCCHHHHHHHHHH
Confidence            355543332 234567888999999999999999999999999999999999999999998653   1   146789999


Q ss_pred             HHHHhchhhcCCCCCceeccCCCCCeeecCCCCeEEeeccCceecCCCCc-----ceeecccccCCCccCcccccc--cC
Q 044022           74 IVNSLAYLHFGFPRPIVLRNFKTQNILFNEENVAKWFDFLLSISIPEGET-----HITTDRVIGTRGYSAPEYISI--CV  146 (241)
Q Consensus        74 i~~~l~~lh~~~~~~ivh~dl~~~nil~~~~~~~~l~df~~~~~~~~~~~-----~~~~~~~~~~~~~~aPE~~~~--~~  146 (241)
                      |+.||.|||   +.+|+||||||+|||++.++.+||+|||.+........     ........|++.|+|||++.+  ..
T Consensus       137 i~~~l~~LH---~~~ivHrDlkp~NIll~~~~~~kl~dfg~~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~  213 (389)
T 3gni_B          137 VLKALDYIH---HMGYVHRSVKASHILISVDGKVYLSGLRSNLSMISHGQRQRVVHDFPKYSVKVLPWLSPEVLQQNLQG  213 (389)
T ss_dssp             HHHHHHHHH---HTTEECCCCSGGGEEECTTCCEEECCGGGCEECEETTEECSCBCCCCTTCTTTGGGSCHHHHSTTSSC
T ss_pred             HHHHHHHHH---hCCeecCCCCHHHEEEcCCCCEEEcccccceeeccccccccccccccccccccccccCHHHHhccCCC
Confidence            999999999   89999999999999999999999999998765432211     111123468889999999987  57


Q ss_pred             CCcchhhHHHHHHHHHHHhcCccccc
Q 044022          147 LNEKSNVFSFGAFLFELLAGRIHIWD  172 (241)
Q Consensus       147 ~~~~~Di~s~G~~~~~~~~g~~p~~~  172 (241)
                      ++.++||||||+++|+|++|+.||..
T Consensus       214 ~~~~~DiwslG~il~el~~g~~pf~~  239 (389)
T 3gni_B          214 YDAKSDIYSVGITACELANGHVPFKD  239 (389)
T ss_dssp             BCTHHHHHHHHHHHHHHHHSSCTTTT
T ss_pred             CCcHhHHHHHHHHHHHHHHCCCCCCC
Confidence            89999999999999999999999965


No 61 
>2pvf_A Fibroblast growth factor receptor 2; kinase domain fold consisting of N- and C-lobes, transferase; HET: PTR ACP; 1.80A {Homo sapiens} PDB: 3cly_A* 2pzr_A* 2pzp_A* 2pvy_A* 2pz5_A* 2q0b_A* 2pwl_A* 2py3_A* 3ri1_A* 1gjo_A 1oec_A* 3b2t_A* 3gql_A* 3gqi_A* 1fgk_A 1fgi_A* 1agw_A 2fgi_A* 3js2_A* 3ky2_A ...
Probab=100.00  E-value=4.4e-40  Score=269.10  Aligned_cols=215  Identities=19%  Similarity=0.305  Sum_probs=169.4

Q ss_pred             CcccccccccccHHHHHHHHHHHHhc-CCCcccceeeeeeeCCcceEEEEecCCCCHHHhhcCCC---------------
Q 044022            1 MKFYGHEYHRHTYGSCINNITYAAQM-SHNHILKRIGCCLQTPIPILVFQSVEYGTLRDCIFGAP---------------   64 (241)
Q Consensus         1 iK~~~~~~~~~~~~~~~~e~~~l~~l-~h~~iv~~~~~~~~~~~~~lv~e~~~~~sL~~~l~~~~---------------   64 (241)
                      ||++..+......+++.+|+++++++ +||||+++++++...+..++||||+++++|.+++....               
T Consensus        72 vK~~~~~~~~~~~~~~~~E~~~l~~l~~hp~iv~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~  151 (334)
T 2pvf_A           72 VKMLKDDATEKDLSDLVSEMEMMKMIGKHKNIINLLGACTQDGPLYVIVEYASKGNLREYLRARRPPGMEYSYDINRVPE  151 (334)
T ss_dssp             EEECCTTCCHHHHHHHHHHHHHHHHHCCCTTBCCEEEEECSSSCCEEEEECCTTCBHHHHHHTTSCTTCCSCC-------
T ss_pred             EeeeccCCcHHHHHHHHHHHHHHHHhhcCCCEeeEEEEEccCCceEEEEECCCCCcHHHHHHHhcccccccccccccccc
Confidence            35555444445567899999999999 99999999999999999999999999999999987542               


Q ss_pred             --c---hHHHHHHHHHHHhchhhcCCCCCceeccCCCCCeeecCCCCeEEeeccCceecCCCCcceeecccccCCCccCc
Q 044022           65 --L---PRLKIASDIVNSLAYLHFGFPRPIVLRNFKTQNILFNEENVAKWFDFLLSISIPEGETHITTDRVIGTRGYSAP  139 (241)
Q Consensus        65 --~---~~~~~~~~i~~~l~~lh~~~~~~ivh~dl~~~nil~~~~~~~~l~df~~~~~~~~~~~~~~~~~~~~~~~~~aP  139 (241)
                        .   .++.++.+++.||.|||   +.+++|+||||+||+++.++.+||+|||.+................+++.|+||
T Consensus       152 ~~~~~~~~~~i~~qi~~aL~~LH---~~~ivH~Dlkp~NIll~~~~~~kL~Dfg~~~~~~~~~~~~~~~~~~~~~~y~aP  228 (334)
T 2pvf_A          152 EQMTFKDLVSCTYQLARGMEYLA---SQKCIHRDLAARNVLVTENNVMKIADFGLARDINNIDYYKKTTNGRLPVKWMAP  228 (334)
T ss_dssp             -CCCHHHHHHHHHHHHHHHHHHH---HTTEECSCCSGGGEEECTTCCEEECCCTTCEECTTTSSEECCSCCCCCGGGCCH
T ss_pred             ccCCHHHHHHHHHHHHHHHHHHH---hCCeeCCCCccceEEEcCCCCEEEccccccccccccccccccCCCCcccceeCh
Confidence              1   35788999999999999   899999999999999999999999999999876654433333344567889999


Q ss_pred             ccccccCCCcchhhHHHHHHHHHHHh-cCcccccccccCCCcccchHHHHHHHhhhcccCCCCCCccccCCCchhHHHHH
Q 044022          140 EYISICVLNEKSNVFSFGAFLFELLA-GRIHIWDLLKDTHDHGCFFNEYLKNYLEDKRFTGIPAPIIVQDIPCIEKEQQL  218 (241)
Q Consensus       140 E~~~~~~~~~~~Di~s~G~~~~~~~~-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  218 (241)
                      |++.+..++.++||||||+++|+|++ |..||...         ...+..... ..+.....     ..        ..+
T Consensus       229 E~~~~~~~~~~~Di~slG~il~ellt~g~~p~~~~---------~~~~~~~~~-~~~~~~~~-----~~--------~~~  285 (334)
T 2pvf_A          229 EALFDRVYTHQSDVWSFGVLMWEIFTLGGSPYPGI---------PVEELFKLL-KEGHRMDK-----PA--------NCT  285 (334)
T ss_dssp             HHHHHCEECHHHHHHHHHHHHHHHHTTSCCSSTTC---------CHHHHHHHH-HHTCCCCC-----CT--------TCC
T ss_pred             HHhcCCCcChHHHHHHHHHHHHHHHhCCCCCcCcC---------CHHHHHHHH-hcCCCCCC-----Cc--------cCC
Confidence            99988889999999999999999999 99998542         112222222 11211111     11        122


Q ss_pred             HHHHHHHHHhccCCCCCCCCCCC
Q 044022          219 HASAQLTLECVNNSPEDRPTMVD  241 (241)
Q Consensus       219 ~~~~~l~~~cl~~~p~~Rpt~~e  241 (241)
                      ..+.+++.+||+.||++|||++|
T Consensus       286 ~~l~~li~~~l~~dp~~Rps~~e  308 (334)
T 2pvf_A          286 NELYMMMRDCWHAVPSQRPTFKQ  308 (334)
T ss_dssp             HHHHHHHHHHTCSSGGGSCCHHH
T ss_pred             HHHHHHHHHHccCChhhCcCHHH
Confidence            57889999999999999999753


No 62 
>2yex_A Serine/threonine-protein kinase CHK1; transferase, cell cycle; HET: YEX; 1.30A {Homo sapiens} PDB: 2x8e_A* 2ydk_A* 2ydj_A* 2yer_A* 2ydi_A* 1nvq_A* 1nvr_A* 1nvs_A* 2wmq_A* 2wmr_A* 2wms_A* 2wmt_A* 2wmu_A* 2wmv_A* 2wmw_A* 2wmx_A* 2x8d_A* 2x8i_A* 2xey_A* 2xez_A* ...
Probab=100.00  E-value=6.3e-40  Score=260.94  Aligned_cols=217  Identities=22%  Similarity=0.250  Sum_probs=166.7

Q ss_pred             CcccccccccccHHHHHHHHHHHHhcCCCcccceeeeeeeCCcceEEEEecCCCCHHHhhcCCCc----hHHHHHHHHHH
Q 044022            1 MKFYGHEYHRHTYGSCINNITYAAQMSHNHILKRIGCCLQTPIPILVFQSVEYGTLRDCIFGAPL----PRLKIASDIVN   76 (241)
Q Consensus         1 iK~~~~~~~~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~~~~~~~lv~e~~~~~sL~~~l~~~~~----~~~~~~~~i~~   76 (241)
                      ||++.........+.+.+|+.++++++||||+++++++...+..++|+||+++++|.+++.....    ....++.+++.
T Consensus        37 vK~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~i~~  116 (276)
T 2yex_A           37 VKIVDMKRAVDCPENIKKEICINKMLNHENVVKFYGHRREGNIQYLFLEYCSGGELFDRIEPDIGMPEPDAQRFFHQLMA  116 (276)
T ss_dssp             EEEEEGGGCTTHHHHHHHHHHHHHTCCCTTBCCEEEEEEETTEEEEEEECCTTEEGGGGSBTTTBCCHHHHHHHHHHHHH
T ss_pred             EEEeeeccchhhhHHHHHHHHHHHhcCCCCceeeeeEEEcCCEEEEEEEecCCCcHHHHHhhccCCCHHHHHHHHHHHHH
Confidence            35554433344567899999999999999999999999999999999999999999999876532    46789999999


Q ss_pred             HhchhhcCCCCCceeccCCCCCeeecCCCCeEEeeccCceecCCCCcceeecccccCCCccCcccccccCC-CcchhhHH
Q 044022           77 SLAYLHFGFPRPIVLRNFKTQNILFNEENVAKWFDFLLSISIPEGETHITTDRVIGTRGYSAPEYISICVL-NEKSNVFS  155 (241)
Q Consensus        77 ~l~~lh~~~~~~ivh~dl~~~nil~~~~~~~~l~df~~~~~~~~~~~~~~~~~~~~~~~~~aPE~~~~~~~-~~~~Di~s  155 (241)
                      ||.|||   +.+++|+||+|+||+++.++.++|+|||.+................+++.|+|||.+.+..+ +.++||||
T Consensus       117 ~l~~lH---~~~i~H~dl~p~Nil~~~~~~~kl~dfg~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~Di~s  193 (276)
T 2yex_A          117 GVVYLH---GIGITHRDIKPENLLLDERDNLKISDFGLATVFRYNNRERLLNKMCGTLPYVAPELLKRREFHAEPVDVWS  193 (276)
T ss_dssp             HHHHHH---HTTEECSCCSGGGEEECTTCCEEECCCTTCEECEETTEECCBCCCCSCGGGCCGGGGTCSSBCHHHHHHHH
T ss_pred             HHHHHH---hCCeeccCCChHHEEEccCCCEEEeeCCCccccCCCcchhcccCCccccCccChHHHhcCCCCCCcchHHH
Confidence            999999   89999999999999999999999999999876543322222234568899999999987665 67899999


Q ss_pred             HHHHHHHHHhcCcccccccccCCCcccchHHHHHHHhhhcccCCCCCCccccCCCchhHHHHHHHHHHHHHHhccCCCCC
Q 044022          156 FGAFLFELLAGRIHIWDLLKDTHDHGCFFNEYLKNYLEDKRFTGIPAPIIVQDIPCIEKEQQLHASAQLTLECVNNSPED  235 (241)
Q Consensus       156 ~G~~~~~~~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~cl~~~p~~  235 (241)
                      ||+++|+|++|..||.......       .. ..........   .. . ..        ..+..+.+++.+||+.||++
T Consensus       194 lG~il~~l~~g~~p~~~~~~~~-------~~-~~~~~~~~~~---~~-~-~~--------~~~~~~~~li~~~l~~~p~~  252 (276)
T 2yex_A          194 CGIVLTAMLAGELPWDQPSDSC-------QE-YSDWKEKKTY---LN-P-WK--------KIDSAPLALLHKILVENPSA  252 (276)
T ss_dssp             HHHHHHHHHHSSCCCSCSCTTS-------HH-HHHHHTTCTT---ST-T-GG--------GSCHHHHHHHHHHSCSSTTT
T ss_pred             HHHHHHHHHhCCCCCCCCchHH-------HH-HHHhhhcccc---cC-c-hh--------hcCHHHHHHHHHHCCCCchh
Confidence            9999999999999996522111       01 1111111100   00 0 01        22357889999999999999


Q ss_pred             CCCCCC
Q 044022          236 RPTMVD  241 (241)
Q Consensus       236 Rpt~~e  241 (241)
                      |||++|
T Consensus       253 Rps~~~  258 (276)
T 2yex_A          253 RITIPD  258 (276)
T ss_dssp             SCCHHH
T ss_pred             CCCHHH
Confidence            999753


No 63 
>3txo_A PKC-L, NPKC-ETA, protein kinase C ETA type; phosphotransferase, transferase-transferase inhibito; HET: TPO 07U; 2.05A {Homo sapiens}
Probab=100.00  E-value=3.1e-40  Score=271.80  Aligned_cols=200  Identities=19%  Similarity=0.243  Sum_probs=158.3

Q ss_pred             ccHHHHHHHHHHHHhc-CCCcccceeeeeeeCCcceEEEEecCCCCHHHhhcCCC----chHHHHHHHHHHHhchhhcCC
Q 044022           11 HTYGSCINNITYAAQM-SHNHILKRIGCCLQTPIPILVFQSVEYGTLRDCIFGAP----LPRLKIASDIVNSLAYLHFGF   85 (241)
Q Consensus        11 ~~~~~~~~e~~~l~~l-~h~~iv~~~~~~~~~~~~~lv~e~~~~~sL~~~l~~~~----~~~~~~~~~i~~~l~~lh~~~   85 (241)
                      .....+.+|.++++.+ +||||+++++++...+..++||||+++|+|.+++....    .....++.+|+.||.|||   
T Consensus        65 ~~~~~~~~E~~il~~~~~hp~Iv~l~~~~~~~~~~~lv~E~~~gg~L~~~l~~~~~~~~~~~~~~~~qi~~aL~~LH---  141 (353)
T 3txo_A           65 DDVECTMTEKRILSLARNHPFLTQLFCCFQTPDRLFFVMEFVNGGDLMFHIQKSRRFDEARARFYAAEIISALMFLH---  141 (353)
T ss_dssp             TTHHHHHHHHHHHHHTTTCTTBCCEEEEEECSSEEEEEEECCCSCBHHHHHHHHSSCCHHHHHHHHHHHHHHHHHHH---
T ss_pred             hHHHHHHHHHHHHHhccCCCceeeEEEEEEeCCEEEEEEeCCCCCcHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHH---
Confidence            4566788999999998 79999999999999999999999999999999986532    246789999999999999   


Q ss_pred             CCCceeccCCCCCeeecCCCCeEEeeccCceecCCCCcceeecccccCCCccCcccccccCCCcchhhHHHHHHHHHHHh
Q 044022           86 PRPIVLRNFKTQNILFNEENVAKWFDFLLSISIPEGETHITTDRVIGTRGYSAPEYISICVLNEKSNVFSFGAFLFELLA  165 (241)
Q Consensus        86 ~~~ivh~dl~~~nil~~~~~~~~l~df~~~~~~~~~~~~~~~~~~~~~~~~~aPE~~~~~~~~~~~Di~s~G~~~~~~~~  165 (241)
                      +++|+||||||+|||++.++.+||+|||++........  ......||+.|+|||++.+..++.++||||||+++|+|++
T Consensus       142 ~~givHrDlkp~NILl~~~g~ikL~DFG~a~~~~~~~~--~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~ell~  219 (353)
T 3txo_A          142 DKGIIYRDLKLDNVLLDHEGHCKLADFGMCKEGICNGV--TTATFCGTPDYIAPEILQEMLYGPAVDWWAMGVLLYEMLC  219 (353)
T ss_dssp             HTTCBCCCCCGGGEEECTTSCEEECCCTTCBCSCC-----------CCGGGCCHHHHHHHHCTTHHHHHHHHHHHHHHHH
T ss_pred             HCCCcccCCCHHHEEECCCCCEEEccccceeecccCCc--cccccCCCcCeEChhhcCCCCcCCccCCCcchHHHHHHHh
Confidence            89999999999999999999999999999875332221  2234579999999999998899999999999999999999


Q ss_pred             cCcccccccccCCCcccchHHHHHHHhhhcccCCCCCCccccCCCchhHHHHHHHHHHHHHHhccCCCCCCCCC
Q 044022          166 GRIHIWDLLKDTHDHGCFFNEYLKNYLEDKRFTGIPAPIIVQDIPCIEKEQQLHASAQLTLECVNNSPEDRPTM  239 (241)
Q Consensus       166 g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~cl~~~p~~Rpt~  239 (241)
                      |+.||...         ...+..........    .   ....        .+..+.+++.+||+.||++||++
T Consensus       220 G~~Pf~~~---------~~~~~~~~i~~~~~----~---~p~~--------~~~~~~~li~~lL~~dP~~R~~~  269 (353)
T 3txo_A          220 GHAPFEAE---------NEDDLFEAILNDEV----V---YPTW--------LHEDATGILKSFMTKNPTMRLGS  269 (353)
T ss_dssp             SSCSSCCS---------SHHHHHHHHHHCCC----C---CCTT--------SCHHHHHHHHHHTCSSGGGSTTS
T ss_pred             CCCCCCCC---------CHHHHHHHHHcCCC----C---CCCC--------CCHHHHHHHHHHhhhCHHHccCC
Confidence            99999652         11222222222111    0   0111        22568899999999999999997


No 64 
>3lxp_A Non-receptor tyrosine-protein kinase TYK2; JAK3, inflammation, cancer, PAN inhibitor, ATP-binding nucleotide-binding, phosphoprotein, SH2 domain; HET: PTR IZA; 1.65A {Homo sapiens} PDB: 3lxn_A* 3nz0_A* 3nyx_A* 4e20_A* 4e1z_A*
Probab=100.00  E-value=1e-40  Score=271.13  Aligned_cols=225  Identities=24%  Similarity=0.310  Sum_probs=169.0

Q ss_pred             CcccccccccccHHHHHHHHHHHHhcCCCcccceeeeeeeC--CcceEEEEecCCCCHHHhhcCCCc---hHHHHHHHHH
Q 044022            1 MKFYGHEYHRHTYGSCINNITYAAQMSHNHILKRIGCCLQT--PIPILVFQSVEYGTLRDCIFGAPL---PRLKIASDIV   75 (241)
Q Consensus         1 iK~~~~~~~~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~~~--~~~~lv~e~~~~~sL~~~l~~~~~---~~~~~~~~i~   75 (241)
                      ||++..+......+.+.+|++++++++||||+++++++...  ...++||||+++++|.+++.....   ....++.+++
T Consensus        65 vK~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~i~~~l~  144 (318)
T 3lxp_A           65 VKALKADAGPQHRSGWKQEIDILRTLYHEHIIKYKGCCEDAGAASLQLVMEYVPLGSLRDYLPRHSIGLAQLLLFAQQIC  144 (318)
T ss_dssp             EEEECTTCCHHHHHHHHHHHHHHHHCCCTTBCCEEEEEEETTTTEEEEEECCCTTCBHHHHGGGSCCCHHHHHHHHHHHH
T ss_pred             EEEeccccChHHHHHHHHHHHHHHhCCCcchhhEEEEEecCCCceEEEEEecccCCcHHHHHhhCCCCHHHHHHHHHHHH
Confidence            45665554445577899999999999999999999999874  578999999999999999977643   5678999999


Q ss_pred             HHhchhhcCCCCCceeccCCCCCeeecCCCCeEEeeccCceecCCCCcc-eeecccccCCCccCcccccccCCCcchhhH
Q 044022           76 NSLAYLHFGFPRPIVLRNFKTQNILFNEENVAKWFDFLLSISIPEGETH-ITTDRVIGTRGYSAPEYISICVLNEKSNVF  154 (241)
Q Consensus        76 ~~l~~lh~~~~~~ivh~dl~~~nil~~~~~~~~l~df~~~~~~~~~~~~-~~~~~~~~~~~~~aPE~~~~~~~~~~~Di~  154 (241)
                      .||.|||   +.+++|+||||+||+++.++.++|+|||.+......... .......++..|+|||++.+..++.++|||
T Consensus       145 ~~l~~LH---~~~ivH~Dikp~Nil~~~~~~~kl~Dfg~a~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~  221 (318)
T 3lxp_A          145 EGMAYLH---AQHYIHRDLAARNVLLDNDRLVKIGDFGLAKAVPEGHEYYRVREDGDSPVFWYAPECLKEYKFYYASDVW  221 (318)
T ss_dssp             HHHHHHH---HTTEECSCCSGGGEEECTTCCEEECCGGGCEECCTTCSEEEC---CCCCGGGCCHHHHHHCEEEHHHHHH
T ss_pred             HHHHHHH---hCCccCCCCchheEEEcCCCCEEECCccccccccccccccccccCCCCCceeeChHHhcCCCCCcHHHHH
Confidence            9999999   899999999999999999999999999999876554322 122334577889999999988899999999


Q ss_pred             HHHHHHHHHHhcCcccccccccC-----CCcccchHHHHHHHhhhcccCCCCCCccccCCCchhHHHHHHHHHHHHHHhc
Q 044022          155 SFGAFLFELLAGRIHIWDLLKDT-----HDHGCFFNEYLKNYLEDKRFTGIPAPIIVQDIPCIEKEQQLHASAQLTLECV  229 (241)
Q Consensus       155 s~G~~~~~~~~g~~p~~~~~~~~-----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~cl  229 (241)
                      |||+++|+|++|..||.......     ......................     ...        ..+..+.+++.+||
T Consensus       222 slG~il~~ll~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-----~~~--------~~~~~l~~li~~~l  288 (318)
T 3lxp_A          222 SFGVTLYELLTHCDSSQSPPTKFLELIGIAQGQMTVLRLTELLERGERLP-----RPD--------KCPAEVYHLMKNCW  288 (318)
T ss_dssp             HHHHHHHHHHTTTCGGGSHHHHHHHHHCSCCHHHHHHHHHHHHHTTCCCC-----CCT--------TCCHHHHHHHHHHT
T ss_pred             HHHHHHHHHHhCCCcccccchhhhhhhcccccchhHHHHHHHHhcccCCC-----CCc--------cccHHHHHHHHHHc
Confidence            99999999999999986521110     0000000001111111111111     111        22367899999999


Q ss_pred             cCCCCCCCCCCC
Q 044022          230 NNSPEDRPTMVD  241 (241)
Q Consensus       230 ~~~p~~Rpt~~e  241 (241)
                      +.||++|||++|
T Consensus       289 ~~dP~~Rps~~e  300 (318)
T 3lxp_A          289 ETEASFRPTFEN  300 (318)
T ss_dssp             CSSGGGSCCHHH
T ss_pred             CCCcccCcCHHH
Confidence            999999999853


No 65 
>1mp8_A Focal adhesion kinase 1; tyrosine protein kinase, transferase; HET: ADP; 1.60A {Homo sapiens} SCOP: d.144.1.7 PDB: 2ijm_A* 2etm_A* 3pxk_A* 2jkq_A* 2j0m_B* 2jkm_A* 2j0l_A* 3bz3_A* 2jko_A* 2jkk_A*
Probab=100.00  E-value=8.4e-41  Score=266.97  Aligned_cols=212  Identities=20%  Similarity=0.268  Sum_probs=152.7

Q ss_pred             cccccccccccHHHHHHHHHHHHhcCCCcccceeeeeeeCCcceEEEEecCCCCHHHhhcCCC--c---hHHHHHHHHHH
Q 044022            2 KFYGHEYHRHTYGSCINNITYAAQMSHNHILKRIGCCLQTPIPILVFQSVEYGTLRDCIFGAP--L---PRLKIASDIVN   76 (241)
Q Consensus         2 K~~~~~~~~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~~~~~~~lv~e~~~~~sL~~~l~~~~--~---~~~~~~~~i~~   76 (241)
                      |...........+.+.+|+.++++++||||+++++++. .+..++||||+++++|.+++....  .   ....++.+++.
T Consensus        49 K~~~~~~~~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~-~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~qi~~  127 (281)
T 1mp8_A           49 KTCKNCTSDSVREKFLQEALTMRQFDHPHIVKLIGVIT-ENPVWIIMELCTLGELRSFLQVRKYSLDLASLILYAYQLST  127 (281)
T ss_dssp             EECTTTTSHHHHHHHHHHHHHHHTCCCTTBCCEEEEEC-SSSCEEEEECCTTEEHHHHHHHTTTTSCHHHHHHHHHHHHH
T ss_pred             EeccccCCHHHHHHHHHHHHHHHhCCCCccceEEEEEc-cCccEEEEecCCCCCHHHHHHhcCCCCCHHHHHHHHHHHHH
Confidence            33333333345677999999999999999999999984 567899999999999999986432  1   46788999999


Q ss_pred             HhchhhcCCCCCceeccCCCCCeeecCCCCeEEeeccCceecCCCCcceeecccccCCCccCcccccccCCCcchhhHHH
Q 044022           77 SLAYLHFGFPRPIVLRNFKTQNILFNEENVAKWFDFLLSISIPEGETHITTDRVIGTRGYSAPEYISICVLNEKSNVFSF  156 (241)
Q Consensus        77 ~l~~lh~~~~~~ivh~dl~~~nil~~~~~~~~l~df~~~~~~~~~~~~~~~~~~~~~~~~~aPE~~~~~~~~~~~Di~s~  156 (241)
                      ||.|||   +.+++||||||+||+++.++.++|+|||.+......... ......+++.|+|||.+.+..++.++|||||
T Consensus       128 ~l~~lH---~~~i~H~dlkp~Nil~~~~~~~kl~Dfg~~~~~~~~~~~-~~~~~~~~~~y~aPE~~~~~~~~~~~Di~sl  203 (281)
T 1mp8_A          128 ALAYLE---SKRFVHRDIAARNVLVSSNDCVKLGDFGLSRYMEDSTYY-KASKGKLPIKWMAPESINFRRFTSASDVWMF  203 (281)
T ss_dssp             HHHHHH---HTTCCCSCCSGGGEEEEETTEEEECC--------------------CCGGGCCHHHHHHCCCSHHHHHHHH
T ss_pred             HHHHHH---hCCeecccccHHHEEECCCCCEEECccccccccCccccc-ccccCCCcccccChhhcccCCCCCccCchHH
Confidence            999999   899999999999999999999999999998765443221 1123346778999999998899999999999


Q ss_pred             HHHHHHHHh-cCcccccccccCCCcccchHHHHHHHhhhcccCCCCCCccccCCCchhHHHHHHHHHHHHHHhccCCCCC
Q 044022          157 GAFLFELLA-GRIHIWDLLKDTHDHGCFFNEYLKNYLEDKRFTGIPAPIIVQDIPCIEKEQQLHASAQLTLECVNNSPED  235 (241)
Q Consensus       157 G~~~~~~~~-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~cl~~~p~~  235 (241)
                      |+++|+|++ |..||......         +...... ......     ....        .+..+.+++.+||+.||++
T Consensus       204 G~~l~ell~~g~~pf~~~~~~---------~~~~~i~-~~~~~~-----~~~~--------~~~~l~~li~~~l~~~p~~  260 (281)
T 1mp8_A          204 GVCMWEILMHGVKPFQGVKNN---------DVIGRIE-NGERLP-----MPPN--------CPPTLYSLMTKCWAYDPSR  260 (281)
T ss_dssp             HHHHHHHHTTSCCTTTTCCGG---------GHHHHHH-TTCCCC-----CCTT--------CCHHHHHHHHHHTCSSGGG
T ss_pred             HHHHHHHHhcCCCCCCcCCHH---------HHHHHHH-cCCCCC-----CCCC--------CCHHHHHHHHHHccCChhh
Confidence            999999996 99999652211         1111111 111111     1111        2267889999999999999


Q ss_pred             CCCCCC
Q 044022          236 RPTMVD  241 (241)
Q Consensus       236 Rpt~~e  241 (241)
                      |||+.|
T Consensus       261 Rps~~~  266 (281)
T 1mp8_A          261 RPRFTE  266 (281)
T ss_dssp             SCCHHH
T ss_pred             CcCHHH
Confidence            999753


No 66 
>2nru_A Interleukin-1 receptor-associated kinase 4; inhibitor, IRAK, transferase; HET: TPO SEP T12; 2.00A {Homo sapiens} PDB: 2nry_A* 2oib_A* 2oic_A* 2oid_A* 2o8y_A*
Probab=100.00  E-value=8.4e-40  Score=264.22  Aligned_cols=217  Identities=23%  Similarity=0.343  Sum_probs=166.5

Q ss_pred             ccHHHHHHHHHHHHhcCCCcccceeeeeeeCCcceEEEEecCCCCHHHhhcCC----C---chHHHHHHHHHHHhchhhc
Q 044022           11 HTYGSCINNITYAAQMSHNHILKRIGCCLQTPIPILVFQSVEYGTLRDCIFGA----P---LPRLKIASDIVNSLAYLHF   83 (241)
Q Consensus        11 ~~~~~~~~e~~~l~~l~h~~iv~~~~~~~~~~~~~lv~e~~~~~sL~~~l~~~----~---~~~~~~~~~i~~~l~~lh~   83 (241)
                      ...+.+.+|++++++++||||+++++++...+..++||||+++++|.+++...    .   ..+..++.+++.||.||| 
T Consensus        72 ~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~i~~~i~~~l~~lH-  150 (307)
T 2nru_A           72 ELKQQFDQEIKVMAKCQHENLVELLGFSSDGDDLCLVYVYMPNGSLLDRLSCLDGTPPLSWHMRCKIAQGAANGINFLH-  150 (307)
T ss_dssp             THHHHHHHHHHHHHHCCCTTBCCEEEEECSSSSCEEEEECCTTCBHHHHHHTGGGCCCCCHHHHHHHHHHHHHHHHHHH-
T ss_pred             HHHHHHHHHHHHHHhcCCCCeEEEEEEEecCCceEEEEEecCCCcHHHHHHhccCCCCCCHHHHHHHHHHHHHHHHHHh-
Confidence            34677999999999999999999999999999999999999999999998632    1   146789999999999999 


Q ss_pred             CCCCCceeccCCCCCeeecCCCCeEEeeccCceecCCCCcceeecccccCCCccCcccccccCCCcchhhHHHHHHHHHH
Q 044022           84 GFPRPIVLRNFKTQNILFNEENVAKWFDFLLSISIPEGETHITTDRVIGTRGYSAPEYISICVLNEKSNVFSFGAFLFEL  163 (241)
Q Consensus        84 ~~~~~ivh~dl~~~nil~~~~~~~~l~df~~~~~~~~~~~~~~~~~~~~~~~~~aPE~~~~~~~~~~~Di~s~G~~~~~~  163 (241)
                        +.+++|+||||+||+++.++.++|+|||.+................|++.|+|||.+.+ .++.++||||||+++|+|
T Consensus       151 --~~~i~H~dlkp~Nili~~~~~~kl~Dfg~~~~~~~~~~~~~~~~~~g~~~y~aPE~~~~-~~~~~~Dv~slG~il~~l  227 (307)
T 2nru_A          151 --ENHHIHRDIKSANILLDEAFTAKISDFGLARASEKFAQTVMTSRIVGTTAYMAPEALRG-EITPKSDIYSFGVVLLEI  227 (307)
T ss_dssp             --HTTEECSCCCGGGEEECTTCCEEECCCTTCEECCSCSSCEECSSCCSCGGGCCHHHHTT-EECTHHHHHHHHHHHHHH
T ss_pred             --cCCeecCCCCHHHEEEcCCCcEEEeecccccccccccccccccccCCCcCcCChHHhcC-CCCccchhHHHHHHHHHH
Confidence              89999999999999999999999999999987655433333344578999999998874 578999999999999999


Q ss_pred             HhcCcccccccccCCCcccchHHHHHHHhhh-cccCCCCCCccccCCCchhHHHHHHHHHHHHHHhccCCCCCCCCCCC
Q 044022          164 LAGRIHIWDLLKDTHDHGCFFNEYLKNYLED-KRFTGIPAPIIVQDIPCIEKEQQLHASAQLTLECVNNSPEDRPTMVD  241 (241)
Q Consensus       164 ~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~cl~~~p~~Rpt~~e  241 (241)
                      ++|..||.......     ............ .......+..+..     .....+..+.+++.+||+.||++|||++|
T Consensus       228 ~~g~~p~~~~~~~~-----~~~~~~~~~~~~~~~~~~~~~~~~~~-----~~~~~~~~l~~li~~cl~~~p~~Rps~~~  296 (307)
T 2nru_A          228 ITGLPAVDEHREPQ-----LLLDIKEEIEDEEKTIEDYIDKKMND-----ADSTSVEAMYSVASQCLHEKKNKRPDIKK  296 (307)
T ss_dssp             HHCCCSBCTTBSSS-----BTTHHHHHHHTTSCCHHHHSCSSCSC-----CCHHHHHHHHHHHHHHTCSSTTTSCCHHH
T ss_pred             HHCCCCcccCcchH-----HHHHHHHHhhhhhhhhhhhccccccc-----cchHHHHHHHHHHHHHcCCCcccCcCHHH
Confidence            99999996532211     111111111111 1111111111111     11356678999999999999999999753


No 67 
>3h4j_B AMPK kdaid, SNF1-like protein kinase SSP2; ATP-binding, nucleotide-binding, phosphoprotei serine/threonine-protein kinase, transferase; 2.80A {Schizosaccharomyces pombe}
Probab=100.00  E-value=1.3e-40  Score=272.12  Aligned_cols=197  Identities=23%  Similarity=0.317  Sum_probs=158.2

Q ss_pred             cHHHHHHHHHHHHhcCCCcccceeeeeeeCCcceEEEEecCCCCHHHhhcCCC----chHHHHHHHHHHHhchhhcCCCC
Q 044022           12 TYGSCINNITYAAQMSHNHILKRIGCCLQTPIPILVFQSVEYGTLRDCIFGAP----LPRLKIASDIVNSLAYLHFGFPR   87 (241)
Q Consensus        12 ~~~~~~~e~~~l~~l~h~~iv~~~~~~~~~~~~~lv~e~~~~~sL~~~l~~~~----~~~~~~~~~i~~~l~~lh~~~~~   87 (241)
                      ....+.+|+++++.++||||+++++++...+..++||||+ +|+|.+++....    .....++.|++.||.|||   +.
T Consensus        52 ~~~~~~~E~~~l~~l~hpnIv~l~~~~~~~~~~~lv~E~~-~g~l~~~l~~~~~l~~~~~~~i~~qi~~aL~~LH---~~  127 (336)
T 3h4j_B           52 MHMRVEREISYLKLLRHPHIIKLYDVITTPTDIVMVIEYA-GGELFDYIVEKKRMTEDEGRRFFQQIICAIEYCH---RH  127 (336)
T ss_dssp             CSHHHHHHHHHHTTCCCTTBCCEEEEEECSSEEEEEECCC-CEEHHHHHHHHCSCCHHHHHHHHHHHHHHHHHHH---HH
T ss_pred             HHHHHHHHHHHHHhCCCCCCCeEEEEEEeCCEEEEEEECC-CCcHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHH---HC
Confidence            4567899999999999999999999999999999999999 689988875432    256789999999999999   89


Q ss_pred             CceeccCCCCCeeecCCCCeEEeeccCceecCCCCcceeecccccCCCccCcccccccCC-CcchhhHHHHHHHHHHHhc
Q 044022           88 PIVLRNFKTQNILFNEENVAKWFDFLLSISIPEGETHITTDRVIGTRGYSAPEYISICVL-NEKSNVFSFGAFLFELLAG  166 (241)
Q Consensus        88 ~ivh~dl~~~nil~~~~~~~~l~df~~~~~~~~~~~~~~~~~~~~~~~~~aPE~~~~~~~-~~~~Di~s~G~~~~~~~~g  166 (241)
                      +++||||||+|||++.++.+||+|||++.........   ....||+.|+|||++.+..+ ++++||||||+++|+|++|
T Consensus       128 givH~Dlkp~NIll~~~~~~kl~DFG~s~~~~~~~~~---~~~~gt~~y~aPE~~~~~~~~~~~~DiwslG~il~~ll~g  204 (336)
T 3h4j_B          128 KIVHRDLKPENLLLDDNLNVKIADFGLSNIMTDGNFL---KTSCGSPNYAAPEVINGKLYAGPEVDVWSCGIVLYVMLVG  204 (336)
T ss_dssp             TCCCCCCSTTTEEECTTCCEEECCSSCTBTTTTSBTT---CCCTTSTTTSCGGGSCCSGGGCHHHHHHHHHHHHHHHHHS
T ss_pred             CeEecCCchhhEEEcCCCCEEEEEeccceeccCCccc---ccccCCcCcCCHHHHcCCCCCCCccchhHHHHHHHHHHhC
Confidence            9999999999999999999999999999765543321   33468999999999987765 6899999999999999999


Q ss_pred             CcccccccccCCCcccchHHHHHHHhhhcccCCCCC--CccccCCCchhHHHHHHHHHHHHHHhccCCCCCCCCCCC
Q 044022          167 RIHIWDLLKDTHDHGCFFNEYLKNYLEDKRFTGIPA--PIIVQDIPCIEKEQQLHASAQLTLECVNNSPEDRPTMVD  241 (241)
Q Consensus       167 ~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~l~~~cl~~~p~~Rpt~~e  241 (241)
                      +.||........                  ...+..  .....        ..+..+.+++.+||+.||.+|||++|
T Consensus       205 ~~Pf~~~~~~~~------------------~~~i~~~~~~~p~--------~~s~~~~~li~~~L~~dP~~Rpt~~e  255 (336)
T 3h4j_B          205 RLPFDDEFIPNL------------------FKKVNSCVYVMPD--------FLSPGAQSLIRRMIVADPMQRITIQE  255 (336)
T ss_dssp             SCSSBCSSSTTC------------------BCCCCSSCCCCCT--------TSCHHHHHHHHTTSCSSGGGSCCHHH
T ss_pred             CCCCCCccHHHH------------------HHHHHcCCCCCcc--------cCCHHHHHHHHHHcCCChhHCcCHHH
Confidence            999965211110                  000000  01111        12357889999999999999999853


No 68 
>3c0i_A Peripheral plasma membrane protein CASK; neurexin, Ca2+/calmodulin dependent protein kinase, Mg synaptic plasticity, pseudokinase, maguk; HET: 3AM; 1.85A {Homo sapiens} PDB: 3c0h_A* 3c0g_A* 3mfr_A* 3mfs_A* 3mft_A 3mfu_A* 3tac_A
Probab=100.00  E-value=6.6e-40  Score=269.85  Aligned_cols=204  Identities=18%  Similarity=0.263  Sum_probs=160.8

Q ss_pred             cHHHHHHHHHHHHhcCCCcccceeeeeeeCCcceEEEEecCCCCHHHhhcCC--------CchHHHHHHHHHHHhchhhc
Q 044022           12 TYGSCINNITYAAQMSHNHILKRIGCCLQTPIPILVFQSVEYGTLRDCIFGA--------PLPRLKIASDIVNSLAYLHF   83 (241)
Q Consensus        12 ~~~~~~~e~~~l~~l~h~~iv~~~~~~~~~~~~~lv~e~~~~~sL~~~l~~~--------~~~~~~~~~~i~~~l~~lh~   83 (241)
                      ..+.+.+|++++++++||||+++++++...+..++||||+++++|.+.+...        ......++.||+.||.||| 
T Consensus        69 ~~~~~~~E~~~l~~l~hpnIv~~~~~~~~~~~~~lv~e~~~g~~L~~~l~~~~~~~~~~~~~~~~~i~~qi~~al~~lH-  147 (351)
T 3c0i_A           69 STEDLKREASICHMLKHPHIVELLETYSSDGMLYMVFEFMDGADLCFEIVKRADAGFVYSEAVASHYMRQILEALRYCH-  147 (351)
T ss_dssp             CHHHHHHHHHHHHHCCCTTBCCEEEEEEETTEEEEEEECCSSCBHHHHHHHHHHTTCCCCHHHHHHHHHHHHHHHHHHH-
T ss_pred             hHHHHHHHHHHHHhCCCCCCCcEEEEEEeCCEEEEEEeCCCCCCHHHHHHHhcccCCCCCHHHHHHHHHHHHHHHHHHH-
Confidence            4678999999999999999999999999999999999999999998877432        1246789999999999999 


Q ss_pred             CCCCCceeccCCCCCeeecCCCC---eEEeeccCceecCCCCcceeecccccCCCccCcccccccCCCcchhhHHHHHHH
Q 044022           84 GFPRPIVLRNFKTQNILFNEENV---AKWFDFLLSISIPEGETHITTDRVIGTRGYSAPEYISICVLNEKSNVFSFGAFL  160 (241)
Q Consensus        84 ~~~~~ivh~dl~~~nil~~~~~~---~~l~df~~~~~~~~~~~~~~~~~~~~~~~~~aPE~~~~~~~~~~~Di~s~G~~~  160 (241)
                        +++++||||||+|||++.++.   +||+|||++.........  .....||+.|+|||++.+..++.++||||||+++
T Consensus       148 --~~~ivHrDlkp~NIl~~~~~~~~~vkl~Dfg~a~~~~~~~~~--~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il  223 (351)
T 3c0i_A          148 --DNNIIHRDVKPHCVLLASKENSAPVKLGGFGVAIQLGESGLV--AGGRVGTPHFMAPEVVKREPYGKPVDVWGCGVIL  223 (351)
T ss_dssp             --HTTEECSCCSGGGEEECSSSTTCCEEECCCTTCEECCTTSCB--CCCCCSCGGGCCHHHHTTCCBCTHHHHHHHHHHH
T ss_pred             --HCCceeccCChHHeEEecCCCCCcEEEecCcceeEecCCCee--ecCCcCCcCccCHHHHcCCCCCchHhhHHHHHHH
Confidence              899999999999999987654   999999999876553321  2345789999999999988899999999999999


Q ss_pred             HHHHhcCcccccccccCCCcccchHHHHHHHhhhcccCCCCCCccccCCCchhHHHHHHHHHHHHHHhccCCCCCCCCCC
Q 044022          161 FELLAGRIHIWDLLKDTHDHGCFFNEYLKNYLEDKRFTGIPAPIIVQDIPCIEKEQQLHASAQLTLECVNNSPEDRPTMV  240 (241)
Q Consensus       161 ~~~~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~cl~~~p~~Rpt~~  240 (241)
                      |+|++|..||....          .+....... +...  ..+..        ....+..+.+++.+||+.||++|||+.
T Consensus       224 ~~ll~g~~pf~~~~----------~~~~~~i~~-~~~~--~~~~~--------~~~~s~~~~~li~~~L~~dP~~R~s~~  282 (351)
T 3c0i_A          224 FILLSGCLPFYGTK----------ERLFEGIIK-GKYK--MNPRQ--------WSHISESAKDLVRRMLMLDPAERITVY  282 (351)
T ss_dssp             HHHHHSSCSSCSSH----------HHHHHHHHH-TCCC--CCHHH--------HTTSCHHHHHHHHHHTCSSTTTSCCHH
T ss_pred             HHHHHCCCCCCCcH----------HHHHHHHHc-CCCC--CCccc--------cccCCHHHHHHHHHHCCCChhHCcCHH
Confidence            99999999996511          111111111 1110  00000        012236789999999999999999975


Q ss_pred             C
Q 044022          241 D  241 (241)
Q Consensus       241 e  241 (241)
                      |
T Consensus       283 e  283 (351)
T 3c0i_A          283 E  283 (351)
T ss_dssp             H
T ss_pred             H
Confidence            3


No 69 
>1xjd_A Protein kinase C, theta type; PKC-theta, ATP, AMP,, transferase; HET: TPO SEP STU; 2.00A {Homo sapiens} SCOP: d.144.1.7 PDB: 2jed_A*
Probab=100.00  E-value=8.3e-40  Score=268.35  Aligned_cols=201  Identities=21%  Similarity=0.261  Sum_probs=162.0

Q ss_pred             ccHHHHHHHHHHHHhc-CCCcccceeeeeeeCCcceEEEEecCCCCHHHhhcCCC----chHHHHHHHHHHHhchhhcCC
Q 044022           11 HTYGSCINNITYAAQM-SHNHILKRIGCCLQTPIPILVFQSVEYGTLRDCIFGAP----LPRLKIASDIVNSLAYLHFGF   85 (241)
Q Consensus        11 ~~~~~~~~e~~~l~~l-~h~~iv~~~~~~~~~~~~~lv~e~~~~~sL~~~l~~~~----~~~~~~~~~i~~~l~~lh~~~   85 (241)
                      .....+.+|..++.++ +||||+++++++...+..++||||+++|+|.+++....    .....++.|++.||.|||   
T Consensus        59 ~~~~~~~~E~~il~~~~~hp~iv~l~~~~~~~~~~~lv~E~~~gg~L~~~l~~~~~~~~~~~~~~~~qi~~aL~~LH---  135 (345)
T 1xjd_A           59 DDVECTMVEKRVLSLAWEHPFLTHMFCTFQTKENLFFVMEYLNGGDLMYHIQSCHKFDLSRATFYAAEIILGLQFLH---  135 (345)
T ss_dssp             TCHHHHHHHHHHHHHHTTCTTBCCEEEEEECSSEEEEEEECCTTCBHHHHHHHHSSCCHHHHHHHHHHHHHHHHHHH---
T ss_pred             hhHHHHHHHHHHHHhcCCCCCCCcEEEEEEeCCEEEEEEeCCCCCcHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHH---
Confidence            4566788999999987 99999999999999999999999999999999986532    246788999999999999   


Q ss_pred             CCCceeccCCCCCeeecCCCCeEEeeccCceecCCCCcceeecccccCCCccCcccccccCCCcchhhHHHHHHHHHHHh
Q 044022           86 PRPIVLRNFKTQNILFNEENVAKWFDFLLSISIPEGETHITTDRVIGTRGYSAPEYISICVLNEKSNVFSFGAFLFELLA  165 (241)
Q Consensus        86 ~~~ivh~dl~~~nil~~~~~~~~l~df~~~~~~~~~~~~~~~~~~~~~~~~~aPE~~~~~~~~~~~Di~s~G~~~~~~~~  165 (241)
                      +++++||||||+|||++.++.+||+|||++........  ......||+.|+|||++.+..++.++|+||||+++|+|++
T Consensus       136 ~~~ivHrDlkp~NIll~~~g~vkL~DFG~a~~~~~~~~--~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~ell~  213 (345)
T 1xjd_A          136 SKGIVYRDLKLDNILLDKDGHIKIADFGMCKENMLGDA--KTNTFCGTPDYIAPEILLGQKYNHSVDWWSFGVLLYEMLI  213 (345)
T ss_dssp             HTTCBCCCCCGGGEEECTTSCEEECCCTTCBCCCCTTC--CBCCCCSCGGGCCHHHHTTCCBCTHHHHHHHHHHHHHHHH
T ss_pred             HCCeEeCCCChhhEEECCCCCEEEeEChhhhhcccCCC--cccCCCCCcccCChhhhcCCCCCChhhhHHHHHHHHHHhc
Confidence            89999999999999999999999999999975432221  1234578999999999999899999999999999999999


Q ss_pred             cCcccccccccCCCcccchHHHHHHHhhhcccCCCCCCccccCCCchhHHHHHHHHHHHHHHhccCCCCCCCCCC
Q 044022          166 GRIHIWDLLKDTHDHGCFFNEYLKNYLEDKRFTGIPAPIIVQDIPCIEKEQQLHASAQLTLECVNNSPEDRPTMV  240 (241)
Q Consensus       166 g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~cl~~~p~~Rpt~~  240 (241)
                      |..||....         ..+.........       ......        .+..+.+++.+||..||++|||+.
T Consensus       214 g~~Pf~~~~---------~~~~~~~i~~~~-------~~~p~~--------~s~~~~~li~~lL~~dp~~R~~~~  264 (345)
T 1xjd_A          214 GQSPFHGQD---------EEELFHSIRMDN-------PFYPRW--------LEKEAKDLLVKLFVREPEKRLGVR  264 (345)
T ss_dssp             SSCSSCCSS---------HHHHHHHHHHCC-------CCCCTT--------SCHHHHHHHHHHSCSSGGGSBTTB
T ss_pred             CCCCCCCCC---------HHHHHHHHHhCC-------CCCCcc--------cCHHHHHHHHHHhcCCHhHcCCCh
Confidence            999996421         112222221111       011111        225788999999999999999985


No 70 
>3qup_A Tyrosine-protein kinase receptor TYRO3; protein kinase inhibitor, receptor tyrosine kinase, spirocyc kinase domain, phosphotransfer, GAS6 ligand; HET: LUN; 1.90A {Mus musculus}
Probab=100.00  E-value=2.6e-40  Score=269.07  Aligned_cols=213  Identities=18%  Similarity=0.314  Sum_probs=152.9

Q ss_pred             ccccccc-ccccHHHHHHHHHHHHhcCCCcccceeeeeeeCCcc------eEEEEecCCCCHHHhhcCC---------C-
Q 044022            2 KFYGHEY-HRHTYGSCINNITYAAQMSHNHILKRIGCCLQTPIP------ILVFQSVEYGTLRDCIFGA---------P-   64 (241)
Q Consensus         2 K~~~~~~-~~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~~~~~~------~lv~e~~~~~sL~~~l~~~---------~-   64 (241)
                      |++..+. .....+++.+|++++++++||||+++++++......      ++|+||+++|+|.+++...         . 
T Consensus        57 K~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~~~~~~~~v~e~~~~~~L~~~l~~~~~~~~~~~~~~  136 (323)
T 3qup_A           57 KMLKADIIASSDIEEFLREAACMKEFDHPHVAKLVGVSLRSRAKGRLPIPMVILPFMKHGDLHAFLLASRIGENPFNLPL  136 (323)
T ss_dssp             EEC------CHHHHHHHHHHHHHTTCCCTTBCCCCEEEECC-------CEEEEEECCTTCBHHHHHHHHHC---CCCCCH
T ss_pred             EEecccccCHHHHHHHHHHHHHHHHCCCCceehhhceeeccccccCCCccEEEEEeccCCcHHHHHHhhhccccccccCH
Confidence            4444332 334567899999999999999999999999876654      9999999999999988432         1 


Q ss_pred             chHHHHHHHHHHHhchhhcCCCCCceeccCCCCCeeecCCCCeEEeeccCceecCCCCcceeecccccCCCccCcccccc
Q 044022           65 LPRLKIASDIVNSLAYLHFGFPRPIVLRNFKTQNILFNEENVAKWFDFLLSISIPEGETHITTDRVIGTRGYSAPEYISI  144 (241)
Q Consensus        65 ~~~~~~~~~i~~~l~~lh~~~~~~ivh~dl~~~nil~~~~~~~~l~df~~~~~~~~~~~~~~~~~~~~~~~~~aPE~~~~  144 (241)
                      ..+..++.|++.||.|||   +.+++||||||+||+++.++.+||+|||.+................+++.|+|||.+.+
T Consensus       137 ~~~~~i~~qi~~al~~LH---~~~ivH~Dikp~NIli~~~~~~kl~Dfg~a~~~~~~~~~~~~~~~~~~~~y~aPE~~~~  213 (323)
T 3qup_A          137 QTLVRFMVDIACGMEYLS---SRNFIHRDLAARNCMLAEDMTVCVADFGLSRKIYSGDYYRQGCASKLPVKWLALESLAD  213 (323)
T ss_dssp             HHHHHHHHHHHHHHHHHH---HTTCCCSCCSGGGEEECTTSCEEECCCCC-----------------CCGGGCCHHHHHH
T ss_pred             HHHHHHHHHHHHHHHHHH---cCCcccCCCCcceEEEcCCCCEEEeeccccccccccccccccccccCcccccCchhhcC
Confidence            246789999999999999   89999999999999999999999999999976654433222233456778999999998


Q ss_pred             cCCCcchhhHHHHHHHHHHHh-cCcccccccccCCCcccchHHHHHHHhhhcccCCCCCCccccCCCchhHHHHHHHHHH
Q 044022          145 CVLNEKSNVFSFGAFLFELLA-GRIHIWDLLKDTHDHGCFFNEYLKNYLEDKRFTGIPAPIIVQDIPCIEKEQQLHASAQ  223 (241)
Q Consensus       145 ~~~~~~~Di~s~G~~~~~~~~-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  223 (241)
                      ..++.++||||||+++|+|++ |..||......         +.......... ..     ...        ..+..+.+
T Consensus       214 ~~~~~~~Di~slG~il~ell~~g~~p~~~~~~~---------~~~~~~~~~~~-~~-----~~~--------~~~~~l~~  270 (323)
T 3qup_A          214 NLYTVHSDVWAFGVTMWEIMTRGQTPYAGIENA---------EIYNYLIGGNR-LK-----QPP--------ECMEEVYD  270 (323)
T ss_dssp             CCCCHHHHHHHHHHHHHHHHTTSCCTTTTCCGG---------GHHHHHHTTCC-CC-----CCT--------TCCHHHHH
T ss_pred             CCCCCccchhhHHHHHHHHHhCCCCCccccChH---------HHHHHHhcCCC-CC-----CCC--------ccCHHHHH
Confidence            899999999999999999999 89999652211         11111111111 11     111        12257899


Q ss_pred             HHHHhccCCCCCCCCCC
Q 044022          224 LTLECVNNSPEDRPTMV  240 (241)
Q Consensus       224 l~~~cl~~~p~~Rpt~~  240 (241)
                      ++.+||+.||++|||+.
T Consensus       271 li~~~l~~dp~~Rps~~  287 (323)
T 3qup_A          271 LMYQCWSADPKQRPSFT  287 (323)
T ss_dssp             HHHHTTCSSGGGSCCHH
T ss_pred             HHHHHccCChhhCcCHH
Confidence            99999999999999964


No 71 
>4hcu_A Tyrosine-protein kinase ITK/TSK; transferase-transferase inhibitor complex; HET: 13L; 1.43A {Homo sapiens} PDB: 4hct_A* 4hcv_A* 3t9t_A* 1sm2_A* 1snu_A* 1snx_A 3v5l_A* 3v5j_A* 3v8t_A* 3v8w_A* 3qgw_A* 3qgy_A* 3miy_A* 3mj1_A* 3mj2_A*
Probab=100.00  E-value=3.8e-40  Score=261.55  Aligned_cols=203  Identities=23%  Similarity=0.359  Sum_probs=161.3

Q ss_pred             cHHHHHHHHHHHHhcCCCcccceeeeeeeCCcceEEEEecCCCCHHHhhcCCCc-----hHHHHHHHHHHHhchhhcCCC
Q 044022           12 TYGSCINNITYAAQMSHNHILKRIGCCLQTPIPILVFQSVEYGTLRDCIFGAPL-----PRLKIASDIVNSLAYLHFGFP   86 (241)
Q Consensus        12 ~~~~~~~e~~~l~~l~h~~iv~~~~~~~~~~~~~lv~e~~~~~sL~~~l~~~~~-----~~~~~~~~i~~~l~~lh~~~~   86 (241)
                      ..+++.+|++++++++||||+++++++...+..++||||+++++|.+++.....     ....++.+++.||.|||   +
T Consensus        48 ~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~i~~~i~~~l~~lH---~  124 (269)
T 4hcu_A           48 SEEDFIEEAEVMMKLSHPKLVQLYGVCLEQAPICLVFEFMEHGCLSDYLRTQRGLFAAETLLGMCLDVCEGMAYLE---E  124 (269)
T ss_dssp             CHHHHHHHHHHHHTCCCTTBCCEEEEECSSSSEEEEEECCTTCBHHHHHHTTTTCCCHHHHHHHHHHHHHHHHHHH---H
T ss_pred             CHHHHHHHHHHHHhCCCCCEeeEEEEEecCCceEEEEEeCCCCcHHHHHHhcCcccCHHHHHHHHHHHHHHHHHHH---h
Confidence            457799999999999999999999999999999999999999999999965421     46789999999999999   8


Q ss_pred             CCceeccCCCCCeeecCCCCeEEeeccCceecCCCCcceeecccccCCCccCcccccccCCCcchhhHHHHHHHHHHHh-
Q 044022           87 RPIVLRNFKTQNILFNEENVAKWFDFLLSISIPEGETHITTDRVIGTRGYSAPEYISICVLNEKSNVFSFGAFLFELLA-  165 (241)
Q Consensus        87 ~~ivh~dl~~~nil~~~~~~~~l~df~~~~~~~~~~~~~~~~~~~~~~~~~aPE~~~~~~~~~~~Di~s~G~~~~~~~~-  165 (241)
                      .+++|+||||+||+++.++.++|+|||.+........ .......+++.|+|||.+.+..++.++||||||+++|+|++ 
T Consensus       125 ~~i~H~dikp~Nil~~~~~~~kl~Dfg~~~~~~~~~~-~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~~l~~ll~~  203 (269)
T 4hcu_A          125 ACVIHRDLAARNCLVGENQVIKVSDFGMTRFVLDDQY-TSSTGTKFPVKWASPEVFSFSRYSSKSDVWSFGVLMWEVFSE  203 (269)
T ss_dssp             TTCCCSCCCGGGEEECGGGCEEECCTTGGGGBCCHHH-HSTTSTTCCGGGCCHHHHHHCCCCHHHHHHHHHHHHHHHHTT
T ss_pred             CCeecCCcchheEEEcCCCCEEecccccccccccccc-ccccCcccccccCCHHHhcCCCCCchhhhHHHHHHHHHHhcC
Confidence            9999999999999999999999999999876543221 11123346678999999998899999999999999999999 


Q ss_pred             cCcccccccccCCCcccchHHHHHHHhhhcccCCCCCCccccCCCchhHHHHHHHHHHHHHHhccCCCCCCCCCCC
Q 044022          166 GRIHIWDLLKDTHDHGCFFNEYLKNYLEDKRFTGIPAPIIVQDIPCIEKEQQLHASAQLTLECVNNSPEDRPTMVD  241 (241)
Q Consensus       166 g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~cl~~~p~~Rpt~~e  241 (241)
                      |..||....         ..+..........   ...   ..        ..+..+.+++.+||+.||++|||+.|
T Consensus       204 g~~p~~~~~---------~~~~~~~~~~~~~---~~~---~~--------~~~~~~~~li~~~l~~~p~~Rps~~~  256 (269)
T 4hcu_A          204 GKIPYENRS---------NSEVVEDISTGFR---LYK---PR--------LASTHVYQIMNHCWRERPEDRPAFSR  256 (269)
T ss_dssp             SCCTTTTCC---------HHHHHHHHHTTCC---CCC---CT--------TSCHHHHHHHHHHTCSSGGGSCCHHH
T ss_pred             CCCCCCCCC---------HHHHHHHHhcCcc---CCC---CC--------cCCHHHHHHHHHHccCCcccCcCHHH
Confidence            999995421         1222222221111   011   11        12257889999999999999999753


No 72 
>3sxs_A Cytoplasmic tyrosine-protein kinase BMX; transferase-transferase inhibitor complex; HET: PP2; 1.89A {Homo sapiens} SCOP: d.144.1.7 PDB: 3sxr_A*
Probab=100.00  E-value=6.5e-40  Score=259.97  Aligned_cols=203  Identities=19%  Similarity=0.288  Sum_probs=161.7

Q ss_pred             cHHHHHHHHHHHHhcCCCcccceeeeeeeCCcceEEEEecCCCCHHHhhcCCC-----chHHHHHHHHHHHhchhhcCCC
Q 044022           12 TYGSCINNITYAAQMSHNHILKRIGCCLQTPIPILVFQSVEYGTLRDCIFGAP-----LPRLKIASDIVNSLAYLHFGFP   86 (241)
Q Consensus        12 ~~~~~~~e~~~l~~l~h~~iv~~~~~~~~~~~~~lv~e~~~~~sL~~~l~~~~-----~~~~~~~~~i~~~l~~lh~~~~   86 (241)
                      ..+++.+|++++++++||||+++++++...+..++||||+++++|.+++....     ..+..++.+++.||.|||   +
T Consensus        46 ~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~i~~qi~~~l~~lH---~  122 (268)
T 3sxs_A           46 SEDEFFQEAQTMMKLSHPKLVKFYGVCSKEYPIYIVTEYISNGCLLNYLRSHGKGLEPSQLLEMCYDVCEGMAFLE---S  122 (268)
T ss_dssp             CHHHHHHHHHHHHHCCCTTBCCEEEEECSSSSEEEEEECCTTCBHHHHHHHHGGGCCHHHHHHHHHHHHHHHHHHH---H
T ss_pred             cHHHHHHHHHHHHhCCCCCEeeEEEEEccCCceEEEEEccCCCcHHHHHHHcCCCCCHHHHHHHHHHHHHHHHHHH---H
Confidence            45779999999999999999999999999999999999999999999986532     256789999999999999   8


Q ss_pred             CCceeccCCCCCeeecCCCCeEEeeccCceecCCCCcceeecccccCCCccCcccccccCCCcchhhHHHHHHHHHHHh-
Q 044022           87 RPIVLRNFKTQNILFNEENVAKWFDFLLSISIPEGETHITTDRVIGTRGYSAPEYISICVLNEKSNVFSFGAFLFELLA-  165 (241)
Q Consensus        87 ~~ivh~dl~~~nil~~~~~~~~l~df~~~~~~~~~~~~~~~~~~~~~~~~~aPE~~~~~~~~~~~Di~s~G~~~~~~~~-  165 (241)
                      .+++|+||||+||+++.++.++|+|||.+.......... .....+++.|+|||.+.+..++.++||||||+++|+|++ 
T Consensus       123 ~~i~H~dikp~Nil~~~~~~~~l~Dfg~~~~~~~~~~~~-~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~~  201 (268)
T 3sxs_A          123 HQFIHRDLAARNCLVDRDLCVKVSDFGMTRYVLDDQYVS-SVGTKFPVKWSAPEVFHYFKYSSKSDVWAFGILMWEVFSL  201 (268)
T ss_dssp             TTEEESSCSGGGEEECTTCCEEECCTTCEEECCTTCEEE-CCSCCCCGGGCCHHHHHHSEEETTHHHHHHHHHHHHHHTT
T ss_pred             CCeecCCcCcceEEECCCCCEEEccCccceecchhhhhc-ccCCCcCcccCCHHHHhccCCchhhhhHHHHHHHHHHHcC
Confidence            999999999999999999999999999998765543222 223345677999999998889999999999999999999 


Q ss_pred             cCcccccccccCCCcccchHHHHHHHhhhcccCCCCCCccccCCCchhHHHHHHHHHHHHHHhccCCCCCCCCCCC
Q 044022          166 GRIHIWDLLKDTHDHGCFFNEYLKNYLEDKRFTGIPAPIIVQDIPCIEKEQQLHASAQLTLECVNNSPEDRPTMVD  241 (241)
Q Consensus       166 g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~cl~~~p~~Rpt~~e  241 (241)
                      |..||....         ..+...... .+..  ...+   .        ..+..+.+++.+||+.||++|||++|
T Consensus       202 g~~p~~~~~---------~~~~~~~~~-~~~~--~~~~---~--------~~~~~l~~li~~~l~~~p~~Rps~~~  254 (268)
T 3sxs_A          202 GKMPYDLYT---------NSEVVLKVS-QGHR--LYRP---H--------LASDTIYQIMYSCWHELPEKRPTFQQ  254 (268)
T ss_dssp             TCCTTTTSC---------HHHHHHHHH-TTCC--CCCC---T--------TSCHHHHHHHHHTTCSSGGGSCCHHH
T ss_pred             CCCCccccC---------hHHHHHHHH-cCCC--CCCC---C--------cChHHHHHHHHHHcCCChhhCcCHHH
Confidence            999985421         111111111 1111  1111   1        11256889999999999999999853


No 73 
>3kn6_A Ribosomal protein S6 kinase alpha-5; AMP-PNP, MSK1, MSK, ATP-binding, metal-binding, NUCL binding, serine/threonine-protein kinase, transferase; 2.00A {Homo sapiens} PDB: 3kn5_A
Probab=100.00  E-value=9.3e-40  Score=266.27  Aligned_cols=213  Identities=20%  Similarity=0.241  Sum_probs=146.5

Q ss_pred             ccHHHHHHHHHHHHhcC-CCcccceeeeeeeCCcceEEEEecCCCCHHHhhcCCCc----hHHHHHHHHHHHhchhhcCC
Q 044022           11 HTYGSCINNITYAAQMS-HNHILKRIGCCLQTPIPILVFQSVEYGTLRDCIFGAPL----PRLKIASDIVNSLAYLHFGF   85 (241)
Q Consensus        11 ~~~~~~~~e~~~l~~l~-h~~iv~~~~~~~~~~~~~lv~e~~~~~sL~~~l~~~~~----~~~~~~~~i~~~l~~lh~~~   85 (241)
                      .....+.+|+.+++.+. ||||+++++++...+..++||||+++|+|.+++.....    ....++.+++.||.|||   
T Consensus        47 ~~~~~~~~e~~~l~~l~~h~niv~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~i~~qi~~~l~~LH---  123 (325)
T 3kn6_A           47 RMEANTQKEITALKLCEGHPNIVKLHEVFHDQLHTFLVMELLNGGELFERIKKKKHFSETEASYIMRKLVSAVSHMH---  123 (325)
T ss_dssp             GGHHHHHHHHHHHHHTTTCTTBCCEEEEEECSSEEEEEECCCCSCBHHHHHHHCSCCCHHHHHHHHHHHHHHHHHHH---
T ss_pred             hhhhhHHHHHHHHHHhcCCCCeeEEEEEEEcCCEEEEEEEccCCCcHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHH---
Confidence            34567889999999997 99999999999999999999999999999999876532    56789999999999999   


Q ss_pred             CCCceeccCCCCCeeecCCC---CeEEeeccCceecCCCCcceeecccccCCCccCcccccccCCCcchhhHHHHHHHHH
Q 044022           86 PRPIVLRNFKTQNILFNEEN---VAKWFDFLLSISIPEGETHITTDRVIGTRGYSAPEYISICVLNEKSNVFSFGAFLFE  162 (241)
Q Consensus        86 ~~~ivh~dl~~~nil~~~~~---~~~l~df~~~~~~~~~~~~~~~~~~~~~~~~~aPE~~~~~~~~~~~Di~s~G~~~~~  162 (241)
                      +.+++||||||+|||++.++   .+||+|||++.........  .....+|+.|+|||++.+..++.++||||||+++|+
T Consensus       124 ~~~ivH~Dlkp~NIll~~~~~~~~~kl~Dfg~a~~~~~~~~~--~~~~~~t~~y~aPE~~~~~~~~~~~DiwslG~il~~  201 (325)
T 3kn6_A          124 DVGVVHRDLKPENLLFTDENDNLEIKIIDFGFARLKPPDNQP--LKTPCFTLHYAAPELLNQNGYDESCDLWSLGVILYT  201 (325)
T ss_dssp             HTTEECCCCCGGGEEEEC----CEEEECCCTTCEECCC------------------------CCCCHHHHHHHHHHHHHH
T ss_pred             HCCCeecCCCHHHEEEecCCCcccEEEeccccceecCCCCCc--ccccCCCcCccCHHHhcCCCCCCccchHHHHHHHHH
Confidence            89999999999999998765   8999999999865443221  233467999999999998899999999999999999


Q ss_pred             HHhcCcccccccccCCCcccchHHHHHHHhhhcccCCCCCCccccCCCchhHHHHHHHHHHHHHHhccCCCCCCCCCCC
Q 044022          163 LLAGRIHIWDLLKDTHDHGCFFNEYLKNYLEDKRFTGIPAPIIVQDIPCIEKEQQLHASAQLTLECVNNSPEDRPTMVD  241 (241)
Q Consensus       163 ~~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~cl~~~p~~Rpt~~e  241 (241)
                      |++|..||.......  ......+...... .+...          .+.......++.+.+|+.+||+.||++|||++|
T Consensus       202 ll~g~~pf~~~~~~~--~~~~~~~~~~~i~-~~~~~----------~~~~~~~~~s~~~~~li~~~L~~dP~~Rpt~~e  267 (325)
T 3kn6_A          202 MLSGQVPFQSHDRSL--TCTSAVEIMKKIK-KGDFS----------FEGEAWKNVSQEAKDLIQGLLTVDPNKRLKMSG  267 (325)
T ss_dssp             HHHSSCTTC---------CCCHHHHHHHHT-TTCCC----------CCSHHHHTSCHHHHHHHHHHHCCCTTTCCCTTT
T ss_pred             HHhCCCCCCCCcccc--ccccHHHHHHHHH-cCCCC----------CCcccccCCCHHHHHHHHHHCCCChhHCCCHHH
Confidence            999999996532211  0111112222211 11110          011111223467899999999999999999975


No 74 
>1rdq_E PKA C-alpha, CAMP-dependent protein kinase, alpha-catalytic SU; CAMP-dependent protein kinase,catalytic mechanism, ATP hydro two nucleotide states; HET: TPO SEP ADP ATP; 1.26A {Mus musculus} SCOP: d.144.1.7 PDB: 2erz_E* 3fjq_E* 1bkx_A* 1atp_E* 1fmo_E* 1j3h_A* 1jlu_E* 1bx6_A* 1re8_A* 1rej_A* 1rek_A* 2cpk_E* 2qcs_A* 2qvs_E* 1l3r_E* 3idb_A* 3idc_A* 3o7l_D* 3ow3_A* 3tnp_C* ...
Probab=100.00  E-value=8.6e-40  Score=268.91  Aligned_cols=196  Identities=15%  Similarity=0.154  Sum_probs=161.4

Q ss_pred             ccHHHHHHHHHHHHhcCCCcccceeeeeeeCCcceEEEEecCCCCHHHhhcCCC----chHHHHHHHHHHHhchhhcCCC
Q 044022           11 HTYGSCINNITYAAQMSHNHILKRIGCCLQTPIPILVFQSVEYGTLRDCIFGAP----LPRLKIASDIVNSLAYLHFGFP   86 (241)
Q Consensus        11 ~~~~~~~~e~~~l~~l~h~~iv~~~~~~~~~~~~~lv~e~~~~~sL~~~l~~~~----~~~~~~~~~i~~~l~~lh~~~~   86 (241)
                      ...+.+.+|++++++++||||+++++++...+..++||||+++|+|.+++....    .....++.+|+.||.|||   +
T Consensus        83 ~~~~~~~~E~~~l~~l~hp~iv~~~~~~~~~~~~~lv~e~~~gg~L~~~l~~~~~~~~~~~~~~~~qi~~aL~~LH---~  159 (350)
T 1rdq_E           83 KQIEHTLNEKRILQAVNFPFLVKLEFSFKDNSNLYMVMEYVAGGEMFSHLRRIGRFSEPHARFYAAQIVLTFEYLH---S  159 (350)
T ss_dssp             TCHHHHHHHHHHHTTCCCTTBCCEEEEEECSSEEEEEEECCTTCBHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHH---H
T ss_pred             HHHHHHHHHHHHHHhCCCCCCCeEEEEEEcCCEEEEEEcCCCCCcHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHH---H
Confidence            456788999999999999999999999999999999999999999999986532    256789999999999999   8


Q ss_pred             CCceeccCCCCCeeecCCCCeEEeeccCceecCCCCcceeecccccCCCccCcccccccCCCcchhhHHHHHHHHHHHhc
Q 044022           87 RPIVLRNFKTQNILFNEENVAKWFDFLLSISIPEGETHITTDRVIGTRGYSAPEYISICVLNEKSNVFSFGAFLFELLAG  166 (241)
Q Consensus        87 ~~ivh~dl~~~nil~~~~~~~~l~df~~~~~~~~~~~~~~~~~~~~~~~~~aPE~~~~~~~~~~~Di~s~G~~~~~~~~g  166 (241)
                      ++|+||||||+|||++.++.+||+|||++.......     ....||+.|+|||++.+..++.++||||||+++|+|++|
T Consensus       160 ~~ivHrDlkp~NIll~~~g~~kL~DFg~a~~~~~~~-----~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~ell~g  234 (350)
T 1rdq_E          160 LDLIYRDLKPENLLIDQQGYIQVTDFGFAKRVKGRT-----WTLCGTPEALAPEIILSKGYNKAVDWWALGVLIYEMAAG  234 (350)
T ss_dssp             TTEECCCCSGGGEEECTTSCEEECCCTTCEECSSCB-----CCCEECGGGCCHHHHTTCCBCTHHHHHHHHHHHHHHHHS
T ss_pred             CCcccccCccceEEECCCCCEEEcccccceeccCCc-----ccccCCccccCHHHhcCCCCCCcCCEecccHhHhHHhhC
Confidence            999999999999999999999999999998764432     334689999999999988999999999999999999999


Q ss_pred             CcccccccccCCCcccchHHHHHHHhhhcccCCCCCCccccCCCchhHHHHHHHHHHHHHHhccCCCCCCCC
Q 044022          167 RIHIWDLLKDTHDHGCFFNEYLKNYLEDKRFTGIPAPIIVQDIPCIEKEQQLHASAQLTLECVNNSPEDRPT  238 (241)
Q Consensus       167 ~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~cl~~~p~~Rpt  238 (241)
                      ..||....         ..+....... +.. .     +...        .+..+.+++.+||+.||++||+
T Consensus       235 ~~Pf~~~~---------~~~~~~~i~~-~~~-~-----~p~~--------~~~~~~~li~~lL~~dp~~R~~  282 (350)
T 1rdq_E          235 YPPFFADQ---------PIQIYEKIVS-GKV-R-----FPSH--------FSSDLKDLLRNLLQVDLTKRFG  282 (350)
T ss_dssp             SCSSCCSS---------HHHHHHHHHH-CCC-C-----CCTT--------CCHHHHHHHHHHSCSCTTTCTT
T ss_pred             CCCCCCCC---------HHHHHHHHHc-CCC-C-----CCCC--------CCHHHHHHHHHHhhcCHHhccC
Confidence            99996521         1122222221 111 1     1111        2257889999999999999998


No 75 
>1kob_A Twitchin; kinase, intrasteric regulation; 2.30A {Aplysia californica} SCOP: d.144.1.7
Probab=100.00  E-value=5.7e-40  Score=273.18  Aligned_cols=204  Identities=18%  Similarity=0.203  Sum_probs=161.9

Q ss_pred             cHHHHHHHHHHHHhcCCCcccceeeeeeeCCcceEEEEecCCCCHHHhhcCCC--c---hHHHHHHHHHHHhchhhcCCC
Q 044022           12 TYGSCINNITYAAQMSHNHILKRIGCCLQTPIPILVFQSVEYGTLRDCIFGAP--L---PRLKIASDIVNSLAYLHFGFP   86 (241)
Q Consensus        12 ~~~~~~~e~~~l~~l~h~~iv~~~~~~~~~~~~~lv~e~~~~~sL~~~l~~~~--~---~~~~~~~~i~~~l~~lh~~~~   86 (241)
                      ....+.+|++++++++||||+++++++...+..++||||+++|+|.+++....  .   ....++.|++.||.|||   +
T Consensus        91 ~~~~~~~E~~il~~l~hpnIv~~~~~~~~~~~~~lv~E~~~gg~L~~~l~~~~~~l~~~~~~~i~~qi~~aL~~LH---~  167 (387)
T 1kob_A           91 DKYTVKNEISIMNQLHHPKLINLHDAFEDKYEMVLILEFLSGGELFDRIAAEDYKMSEAEVINYMRQACEGLKHMH---E  167 (387)
T ss_dssp             HHHHHHHHHHHHTTCCSTTBCCEEEEEECSSEEEEEEECCCCCBHHHHTTCTTCCBCHHHHHHHHHHHHHHHHHHH---H
T ss_pred             hHHHHHHHHHHHHhCCCcCCCeEEEEEEeCCEEEEEEEcCCCCcHHHHHHhhcCCCCHHHHHHHHHHHHHHHHHHH---h
Confidence            34578899999999999999999999999999999999999999999987542  2   46789999999999999   8


Q ss_pred             CCceeccCCCCCeeecC--CCCeEEeeccCceecCCCCcceeecccccCCCccCcccccccCCCcchhhHHHHHHHHHHH
Q 044022           87 RPIVLRNFKTQNILFNE--ENVAKWFDFLLSISIPEGETHITTDRVIGTRGYSAPEYISICVLNEKSNVFSFGAFLFELL  164 (241)
Q Consensus        87 ~~ivh~dl~~~nil~~~--~~~~~l~df~~~~~~~~~~~~~~~~~~~~~~~~~aPE~~~~~~~~~~~Di~s~G~~~~~~~  164 (241)
                      .+++||||||+|||++.  .+.+||+|||++.........   ....||+.|+|||++.+..++.++||||||+++|+|+
T Consensus       168 ~givHrDlkp~NIll~~~~~~~vkL~DFG~a~~~~~~~~~---~~~~gt~~y~aPE~~~~~~~~~~~DiwSlG~il~ell  244 (387)
T 1kob_A          168 HSIVHLDIKPENIMCETKKASSVKIIDFGLATKLNPDEIV---KVTTATAEFAAPEIVDREPVGFYTDMWAIGVLGYVLL  244 (387)
T ss_dssp             TTEECCCCCGGGEEESSTTCCCEEECCCTTCEECCTTSCE---EEECSSGGGCCHHHHTTCCBCHHHHHHHHHHHHHHHH
T ss_pred             CCeeecccchHHeEEecCCCCceEEEecccceecCCCcce---eeeccCCCccCchhccCCCCCCcccEeeHhHHHHHHH
Confidence            99999999999999974  478999999999876544322   2346899999999999888999999999999999999


Q ss_pred             hcCcccccccccCCCcccchHHHHHHHhhhcccCCCCCCccccCCCchhHHHHHHHHHHHHHHhccCCCCCCCCCCC
Q 044022          165 AGRIHIWDLLKDTHDHGCFFNEYLKNYLEDKRFTGIPAPIIVQDIPCIEKEQQLHASAQLTLECVNNSPEDRPTMVD  241 (241)
Q Consensus       165 ~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~cl~~~p~~Rpt~~e  241 (241)
                      +|..||....         ..+......... . .. ......        ..+..+.+++.+||+.||++|||++|
T Consensus       245 tg~~Pf~~~~---------~~~~~~~i~~~~-~-~~-~~~~~~--------~~s~~~~~li~~~L~~dP~~Rpt~~e  301 (387)
T 1kob_A          245 SGLSPFAGED---------DLETLQNVKRCD-W-EF-DEDAFS--------SVSPEAKDFIKNLLQKEPRKRLTVHD  301 (387)
T ss_dssp             HSCCSSCCSS---------HHHHHHHHHHCC-C-CC-CSSTTT--------TSCHHHHHHHHTTSCSSGGGSCCHHH
T ss_pred             hCCCCCCCCC---------HHHHHHHHHhCC-C-CC-Cccccc--------cCCHHHHHHHHHHcCCChhHCcCHHH
Confidence            9999996521         112222221111 1 11 111111        12357889999999999999999853


No 76 
>3hko_A Calcium/calmodulin-dependent protein kinase with domain and 2 calmodulin-like EF...; structural genomics, protist parasite; HET: ANP; 1.80A {Cryptosporidium parvum iowa II}
Probab=100.00  E-value=2.4e-40  Score=271.56  Aligned_cols=208  Identities=20%  Similarity=0.211  Sum_probs=158.0

Q ss_pred             ccHHHHHHHHHHHHhcCCCcccceeeeeeeCCcceEEEEecCCCCHHHhhcCC---------------------------
Q 044022           11 HTYGSCINNITYAAQMSHNHILKRIGCCLQTPIPILVFQSVEYGTLRDCIFGA---------------------------   63 (241)
Q Consensus        11 ~~~~~~~~e~~~l~~l~h~~iv~~~~~~~~~~~~~lv~e~~~~~sL~~~l~~~---------------------------   63 (241)
                      ...+.+.+|++++++++||||+++++++...+..++||||+++|+|.+++...                           
T Consensus        70 ~~~~~~~~E~~~l~~l~hpniv~~~~~~~~~~~~~lv~e~~~gg~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  149 (345)
T 3hko_A           70 KDVERIKTEVRLMKKLHHPNIARLYEVYEDEQYICLVMELCHGGHLLDKLNVFIDDSTGKCAMDVVKTQICPCPECNEEA  149 (345)
T ss_dssp             CHHHHHHHHHHHHHHCCCTTBCCEEEEEECSSEEEEEEECCCSCBHHHHEEEEEETTTTEEEEEEECCCCCCSHHHHHHH
T ss_pred             HHHHHHHHHHHHHHhCCCCCcceeehhhccCCeEEEEEeCCCCCcHHHHHHHhhcccccccccccccccccccccccccc
Confidence            45678999999999999999999999999999999999999999999998520                           


Q ss_pred             -----------------CchHHHHHHHHHHHhchhhcCCCCCceeccCCCCCeeecCCC--CeEEeeccCceecCCCC--
Q 044022           64 -----------------PLPRLKIASDIVNSLAYLHFGFPRPIVLRNFKTQNILFNEEN--VAKWFDFLLSISIPEGE--  122 (241)
Q Consensus        64 -----------------~~~~~~~~~~i~~~l~~lh~~~~~~ivh~dl~~~nil~~~~~--~~~l~df~~~~~~~~~~--  122 (241)
                                       ......++.+++.||.|||   +.+++||||||+||+++.++  .+||+|||.+.......  
T Consensus       150 ~~~~~~~~~~~~~~~~~~~~~~~i~~qi~~~l~~LH---~~~ivH~Dlkp~NIll~~~~~~~~kl~Dfg~a~~~~~~~~~  226 (345)
T 3hko_A          150 INGSIHGFRESLDFVQREKLISNIMRQIFSALHYLH---NQGICHRDIKPENFLFSTNKSFEIKLVDFGLSKEFYKLNNG  226 (345)
T ss_dssp             HHSCC--CEEECCHHHHHHHHHHHHHHHHHHHHHHH---HTTEECCCCCGGGEEESCSSSCCEEECCCTTCEEGGGTTCC
T ss_pred             cccccccccccccccccHHHHHHHHHHHHHHHHHHH---HCCccccCCChhhEEEecCCCceEEEeeccccccccccCcc
Confidence                             0124568999999999999   89999999999999998776  89999999998653321  


Q ss_pred             cceeecccccCCCccCcccccc--cCCCcchhhHHHHHHHHHHHhcCcccccccccCCCcccchHHHHHHHhhhcccCCC
Q 044022          123 THITTDRVIGTRGYSAPEYISI--CVLNEKSNVFSFGAFLFELLAGRIHIWDLLKDTHDHGCFFNEYLKNYLEDKRFTGI  200 (241)
Q Consensus       123 ~~~~~~~~~~~~~~~aPE~~~~--~~~~~~~Di~s~G~~~~~~~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  200 (241)
                      .........|++.|+|||.+.+  ..++.++||||||+++|+|++|+.||....         ..+...........  .
T Consensus       227 ~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~DiwslG~il~el~~g~~pf~~~~---------~~~~~~~~~~~~~~--~  295 (345)
T 3hko_A          227 EYYGMTTKAGTPYFVAPEVLNTTNESYGPKCDAWSAGVLLHLLLMGAVPFPGVN---------DADTISQVLNKKLC--F  295 (345)
T ss_dssp             --------CCCGGGCCHHHHTCSSSCCCTHHHHHHHHHHHHHHHHSSCSSCCSS---------HHHHHHHHHHCCCC--T
T ss_pred             ccccccccCCCccccCchhhccCCCCCCcHHHHHHHHHHHHHHHHCCCCCCCCC---------hHHHHHHHHhcccc--c
Confidence            1112234568999999999875  578899999999999999999999995421         12222222221111  1


Q ss_pred             CCCccccCCCchhHHHHHHHHHHHHHHhccCCCCCCCCCCC
Q 044022          201 PAPIIVQDIPCIEKEQQLHASAQLTLECVNNSPEDRPTMVD  241 (241)
Q Consensus       201 ~~~~~~~~~~~~~~~~~~~~~~~l~~~cl~~~p~~Rpt~~e  241 (241)
                      ..+. .        ...++.+.+++.+||+.||.+|||+.|
T Consensus       296 ~~~~-~--------~~~~~~~~~li~~~l~~~p~~Rps~~~  327 (345)
T 3hko_A          296 ENPN-Y--------NVLSPLARDLLSNLLNRNVDERFDAMR  327 (345)
T ss_dssp             TSGG-G--------GGSCHHHHHHHHHHSCSCTTTSCCHHH
T ss_pred             CCcc-c--------ccCCHHHHHHHHHHcCCChhHCCCHHH
Confidence            1111 0        122367899999999999999999753


No 77 
>2ozo_A Tyrosine-protein kinase ZAP-70; inactive ZAP-70, tandem SH2, autoinhibition, ITAM, hydrogen bonding network, TCR signaling, transferase; HET: ANP; 2.60A {Homo sapiens}
Probab=100.00  E-value=2.1e-40  Score=290.51  Aligned_cols=214  Identities=21%  Similarity=0.294  Sum_probs=163.6

Q ss_pred             CcccccccccccHHHHHHHHHHHHhcCCCcccceeeeeeeCCcceEEEEecCCCCHHHhhcCCCc-----hHHHHHHHHH
Q 044022            1 MKFYGHEYHRHTYGSCINNITYAAQMSHNHILKRIGCCLQTPIPILVFQSVEYGTLRDCIFGAPL-----PRLKIASDIV   75 (241)
Q Consensus         1 iK~~~~~~~~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~~~~~~~lv~e~~~~~sL~~~l~~~~~-----~~~~~~~~i~   75 (241)
                      ||++.........++|.+|++++++++|||||++++++.. +..++||||+++|+|.+++.....     ....++.+++
T Consensus       368 vK~~~~~~~~~~~~~~~~E~~il~~l~hpniv~l~~~~~~-~~~~lv~E~~~~g~L~~~l~~~~~~l~~~~~~~i~~qi~  446 (613)
T 2ozo_A          368 IKVLKQGTEKADTEEMMREAQIMHQLDNPYIVRLIGVCQA-EALMLVMEMAGGGPLHKFLVGKREEIPVSNVAELLHQVS  446 (613)
T ss_dssp             EEECCCCCSSTTHHHHHHHHHHHTTCCCTTBCCEEEEEES-SSEEEEEECCTTCBHHHHHTTCTTTSCHHHHHHHHHHHH
T ss_pred             EEEcCCCCChHHHHHHHHHHHHHHhCCCCCEeeEEEEecc-CCeEEEEEeCCCCcHHHHHhhccCCCCHHHHHHHHHHHH
Confidence            4566555455567889999999999999999999999976 568999999999999999865421     4678999999


Q ss_pred             HHhchhhcCCCCCceeccCCCCCeeecCCCCeEEeeccCceecCCCCc-ceeecccccCCCccCcccccccCCCcchhhH
Q 044022           76 NSLAYLHFGFPRPIVLRNFKTQNILFNEENVAKWFDFLLSISIPEGET-HITTDRVIGTRGYSAPEYISICVLNEKSNVF  154 (241)
Q Consensus        76 ~~l~~lh~~~~~~ivh~dl~~~nil~~~~~~~~l~df~~~~~~~~~~~-~~~~~~~~~~~~~~aPE~~~~~~~~~~~Di~  154 (241)
                      .||.|||   +++|+||||||+|||++.++.+||+|||+++....... ........+++.|+|||++.+..++.++|||
T Consensus       447 ~~L~~LH---~~~iiHrDlkp~NILl~~~~~vkL~DFGla~~~~~~~~~~~~~~~~~~~~~y~APE~~~~~~~~~~sDvw  523 (613)
T 2ozo_A          447 MGMKYLE---EKNFVHRNLAARNVLLVNRHYAKISDFGLSKALGADDSYYTARSAGKWPLKWYAPECINFRKFSSRSDVW  523 (613)
T ss_dssp             HHHHHHH---HTTCCCSCCSGGGEEEEETTEEEECCCSTTTTCC--------------CCTTSCHHHHHHCCCCHHHHHH
T ss_pred             HHHHHHH---HCCEEcCcCCHHHEEEcCCCcEEEeeccCcccccCCCceeeeccCCCCccceeCHhhhcCCCCCcHHHHH
Confidence            9999999   89999999999999999999999999999976543221 1111223456789999999988999999999


Q ss_pred             HHHHHHHHHHh-cCcccccccccCCCcccchHHHHHHHhhhcccCCCCCCccccCCCchhHHHHHHHHHHHHHHhccCCC
Q 044022          155 SFGAFLFELLA-GRIHIWDLLKDTHDHGCFFNEYLKNYLEDKRFTGIPAPIIVQDIPCIEKEQQLHASAQLTLECVNNSP  233 (241)
Q Consensus       155 s~G~~~~~~~~-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~cl~~~p  233 (241)
                      |||+++|||++ |+.||.....         .+..... ..+.....+     .        .++..+.++|.+||+.||
T Consensus       524 SlGv~l~ellt~G~~Pf~~~~~---------~~~~~~i-~~~~~~~~p-----~--------~~~~~l~~li~~cl~~dP  580 (613)
T 2ozo_A          524 SYGVTMWEALSYGQKPYKKMKG---------PEVMAFI-EQGKRMECP-----P--------ECPPELYALMSDCWIYKW  580 (613)
T ss_dssp             HHHHHHHHHHTTSCCTTTTCCS---------HHHHHHH-HTTCCCCCC-----T--------TCCHHHHHHHHHTTCSST
T ss_pred             HHHHHHHHHHHCCCCCCCCCCH---------HHHHHHH-HcCCCCCCC-----C--------cCCHHHHHHHHHHcCCCh
Confidence            99999999998 9999965221         1222222 222111111     1        223678999999999999


Q ss_pred             CCCCCCCC
Q 044022          234 EDRPTMVD  241 (241)
Q Consensus       234 ~~Rpt~~e  241 (241)
                      ++|||++|
T Consensus       581 ~~RPs~~~  588 (613)
T 2ozo_A          581 EDRPDFLT  588 (613)
T ss_dssp             TTSCCHHH
T ss_pred             hHCcCHHH
Confidence            99999753


No 78 
>1opk_A P150, C-ABL, proto-oncogene tyrosine-protein kinase ABL1; transferase; HET: MYR P16; 1.80A {Mus musculus} SCOP: b.34.2.1 d.93.1.1 d.144.1.7 PDB: 1opl_A* 2fo0_A* 2abl_A
Probab=100.00  E-value=1.9e-40  Score=284.52  Aligned_cols=203  Identities=20%  Similarity=0.318  Sum_probs=161.9

Q ss_pred             cHHHHHHHHHHHHhcCCCcccceeeeeeeCCcceEEEEecCCCCHHHhhcCCC---c---hHHHHHHHHHHHhchhhcCC
Q 044022           12 TYGSCINNITYAAQMSHNHILKRIGCCLQTPIPILVFQSVEYGTLRDCIFGAP---L---PRLKIASDIVNSLAYLHFGF   85 (241)
Q Consensus        12 ~~~~~~~e~~~l~~l~h~~iv~~~~~~~~~~~~~lv~e~~~~~sL~~~l~~~~---~---~~~~~~~~i~~~l~~lh~~~   85 (241)
                      ..+.|.+|++++++++||||++++++|...+..++||||+++|+|.+++....   .   ..+.++.|++.||.|||   
T Consensus       259 ~~~~~~~E~~~l~~l~hpniv~l~~~~~~~~~~~lv~E~~~~g~L~~~l~~~~~~~~~~~~~~~i~~qi~~~L~~LH---  335 (495)
T 1opk_A          259 EVEEFLKEAAVMKEIKHPNLVQLLGVCTREPPFYIITEFMTYGNLLDYLRECNRQEVSAVVLLYMATQISSAMEYLE---  335 (495)
T ss_dssp             CHHHHHHHHHHHHHCCCTTBCCEEEEECSSSSCEEEEECCTTCBHHHHHHHSCTTTSCHHHHHHHHHHHHHHHHHHH---
T ss_pred             chHHHHHHHHHHHhcCCCCEeeEEEEEecCCcEEEEEEccCCCCHHHHHHhcCcCCCCHHHHHHHHHHHHHHHHHHH---
Confidence            56789999999999999999999999999999999999999999999986432   1   46788999999999999   


Q ss_pred             CCCceeccCCCCCeeecCCCCeEEeeccCceecCCCCcceeecccccCCCccCcccccccCCCcchhhHHHHHHHHHHHh
Q 044022           86 PRPIVLRNFKTQNILFNEENVAKWFDFLLSISIPEGETHITTDRVIGTRGYSAPEYISICVLNEKSNVFSFGAFLFELLA  165 (241)
Q Consensus        86 ~~~ivh~dl~~~nil~~~~~~~~l~df~~~~~~~~~~~~~~~~~~~~~~~~~aPE~~~~~~~~~~~Di~s~G~~~~~~~~  165 (241)
                      +++++||||||+|||++.++.+||+|||++........ .......++..|+|||++....++.++||||||+++|+|++
T Consensus       336 ~~~ivHrDlkp~NIll~~~~~~kl~DFG~a~~~~~~~~-~~~~~~~~~~~y~aPE~~~~~~~~~~sDvwSlG~~l~el~t  414 (495)
T 1opk_A          336 KKNFIHRNLAARNCLVGENHLVKVADFGLSRLMTGDTY-TAHAGAKFPIKWTAPESLAYNKFSIKSDVWAFGVLLWEIAT  414 (495)
T ss_dssp             HTTEECSCCSGGGEEECGGGCEEECCTTCEECCTTCCE-ECCTTCCCCGGGCCHHHHHHCEECHHHHHHHHHHHHHHHHT
T ss_pred             hCCcccCCCChhhEEECCCCcEEEeecccceeccCCce-eecCCCcCCcceeCHhHHhcCCCCcHHhHHhHHHHHHHHHh
Confidence            89999999999999999999999999999986644321 12223345678999999998899999999999999999999


Q ss_pred             -cCcccccccccCCCcccchHHHHHHHhhhcccCCCCCCccccCCCchhHHHHHHHHHHHHHHhccCCCCCCCCCCC
Q 044022          166 -GRIHIWDLLKDTHDHGCFFNEYLKNYLEDKRFTGIPAPIIVQDIPCIEKEQQLHASAQLTLECVNNSPEDRPTMVD  241 (241)
Q Consensus       166 -g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~cl~~~p~~Rpt~~e  241 (241)
                       |..||......         +..... ..+....     ...        ..+..+.+|+.+||+.||++|||++|
T Consensus       415 ~g~~p~~~~~~~---------~~~~~~-~~~~~~~-----~~~--------~~~~~l~~li~~cl~~dP~~RPs~~e  468 (495)
T 1opk_A          415 YGMSPYPGIDLS---------QVYELL-EKDYRME-----RPE--------GCPEKVYELMRACWQWNPSDRPSFAE  468 (495)
T ss_dssp             TSCCSSTTCCGG---------GHHHHH-HTTCCCC-----CCT--------TCCHHHHHHHHHHTCSSGGGSCCHHH
T ss_pred             CCCCCCCCCCHH---------HHHHHH-HcCCCCC-----CCC--------CCCHHHHHHHHHHcCcChhHCcCHHH
Confidence             99998652211         111111 1111111     111        22367899999999999999999853


No 79 
>2pmi_A Negative RE, cyclin-dependent protein kinase PHO85; cyclin-dependent kinase, signaling protein,transfera cycle complex; HET: MES AGS; 2.90A {Saccharomyces cerevisiae} PDB: 2pk9_A*
Probab=100.00  E-value=2.3e-40  Score=269.01  Aligned_cols=166  Identities=20%  Similarity=0.259  Sum_probs=139.1

Q ss_pred             CcccccccccccHHHHHHHHHHHHhcCCCcccceeeeeeeCCcceEEEEecCCCCHHHhhcCC-------Cc---hHHHH
Q 044022            1 MKFYGHEYHRHTYGSCINNITYAAQMSHNHILKRIGCCLQTPIPILVFQSVEYGTLRDCIFGA-------PL---PRLKI   70 (241)
Q Consensus         1 iK~~~~~~~~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~~~~~~~lv~e~~~~~sL~~~l~~~-------~~---~~~~~   70 (241)
                      ||.+.........+.+.+|++++++++||||+++++++..++..++||||++ ++|.+++...       ..   ....+
T Consensus        35 iK~~~~~~~~~~~~~~~~E~~~l~~l~hp~iv~~~~~~~~~~~~~lv~e~~~-~~L~~~l~~~~~~~~~~~~~~~~~~~~  113 (317)
T 2pmi_A           35 LKEVKLDSEEGTPSTAIREISLMKELKHENIVRLYDVIHTENKLTLVFEFMD-NDLKKYMDSRTVGNTPRGLELNLVKYF  113 (317)
T ss_dssp             EEEEECCSTTCSCHHHHHHHHHHTTCCBTTBCCEEEEECCTTEEEEEEECCC-CBHHHHHHHHHSSSCCCCCCHHHHHHH
T ss_pred             EEEeecccccccHHHHHHHHHHHHhcCCCCcceEEEEEEECCeEEEEEEecC-CCHHHHHHhccccccccCCCHHHHHHH
Confidence            3555444444556788999999999999999999999999999999999998 6999887532       11   35678


Q ss_pred             HHHHHHHhchhhcCCCCCceeccCCCCCeeecCCCCeEEeeccCceecCCCCcceeecccccCCCccCccccccc-CCCc
Q 044022           71 ASDIVNSLAYLHFGFPRPIVLRNFKTQNILFNEENVAKWFDFLLSISIPEGETHITTDRVIGTRGYSAPEYISIC-VLNE  149 (241)
Q Consensus        71 ~~~i~~~l~~lh~~~~~~ivh~dl~~~nil~~~~~~~~l~df~~~~~~~~~~~~~~~~~~~~~~~~~aPE~~~~~-~~~~  149 (241)
                      +.|++.||.|||   +.+++||||||+||+++.++.+||+|||.+.........  .....+|+.|+|||++.+. .++.
T Consensus       114 ~~qi~~aL~~lH---~~~ivH~Dlkp~NIl~~~~~~~kl~Dfg~~~~~~~~~~~--~~~~~~t~~y~aPE~~~~~~~~~~  188 (317)
T 2pmi_A          114 QWQLLQGLAFCH---ENKILHRDLKPQNLLINKRGQLKLGDFGLARAFGIPVNT--FSSEVVTLWYRAPDVLMGSRTYST  188 (317)
T ss_dssp             HHHHHHHHHHHH---HTTEECCCCCGGGEEECTTCCEEECCCSSCEETTSCCCC--CCCCCSCCTTCCHHHHTTCCCCCT
T ss_pred             HHHHHHHHHHHH---HCCeeeCCCChHHeEEcCCCCEEECcCccceecCCCccc--CCCCcccccccCchHhhCCCCCCc
Confidence            899999999999   899999999999999999999999999999876433211  1234689999999999764 6899


Q ss_pred             chhhHHHHHHHHHHHhcCccccc
Q 044022          150 KSNVFSFGAFLFELLAGRIHIWD  172 (241)
Q Consensus       150 ~~Di~s~G~~~~~~~~g~~p~~~  172 (241)
                      ++||||||+++|+|++|+.||..
T Consensus       189 ~~DiwslG~il~el~~g~~pf~~  211 (317)
T 2pmi_A          189 SIDIWSCGCILAEMITGKPLFPG  211 (317)
T ss_dssp             HHHHHHHHHHHHHHHHSSCSCCC
T ss_pred             HHHHHHHHHHHHHHHhCCCCCCC
Confidence            99999999999999999999964


No 80 
>4eqm_A Protein kinase; transferase; HET: ANP; 3.00A {Staphylococcus aureus subsp}
Probab=100.00  E-value=4.5e-40  Score=264.56  Aligned_cols=206  Identities=22%  Similarity=0.292  Sum_probs=156.7

Q ss_pred             ccHHHHHHHHHHHHhcCCCcccceeeeeeeCCcceEEEEecCCCCHHHhhcCCC----chHHHHHHHHHHHhchhhcCCC
Q 044022           11 HTYGSCINNITYAAQMSHNHILKRIGCCLQTPIPILVFQSVEYGTLRDCIFGAP----LPRLKIASDIVNSLAYLHFGFP   86 (241)
Q Consensus        11 ~~~~~~~~e~~~l~~l~h~~iv~~~~~~~~~~~~~lv~e~~~~~sL~~~l~~~~----~~~~~~~~~i~~~l~~lh~~~~   86 (241)
                      ...+++.+|+.++++++||||+++++++...+..++||||+++++|.+++....    .....++.+++.||.|||   +
T Consensus        53 ~~~~~~~~e~~~l~~l~hp~iv~~~~~~~~~~~~~lv~e~~~g~~L~~~l~~~~~~~~~~~~~~~~qi~~~l~~lH---~  129 (294)
T 4eqm_A           53 ETLKRFEREVHNSSQLSHQNIVSMIDVDEEDDCYYLVMEYIEGPTLSEYIESHGPLSVDTAINFTNQILDGIKHAH---D  129 (294)
T ss_dssp             HHHHHHHHHHHHHTTCCBTTBCCEEEEEECSSEEEEEEECCCSCBHHHHHHHHCSCCHHHHHHHHHHHHHHHHHHH---H
T ss_pred             HHHHHHHHHHHHHhcCCCCCCceEEEeeeeCCeEEEEEeCCCCCCHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHH---H
Confidence            445789999999999999999999999999999999999999999999986542    256789999999999999   8


Q ss_pred             CCceeccCCCCCeeecCCCCeEEeeccCceecCCCCcceeecccccCCCccCcccccccCCCcchhhHHHHHHHHHHHhc
Q 044022           87 RPIVLRNFKTQNILFNEENVAKWFDFLLSISIPEGETHITTDRVIGTRGYSAPEYISICVLNEKSNVFSFGAFLFELLAG  166 (241)
Q Consensus        87 ~~ivh~dl~~~nil~~~~~~~~l~df~~~~~~~~~~~~~~~~~~~~~~~~~aPE~~~~~~~~~~~Di~s~G~~~~~~~~g  166 (241)
                      .+++||||||+||+++.++.++|+|||.+......... ......||+.|+|||.+.+..++.++||||||+++|+|++|
T Consensus       130 ~~i~H~Dlkp~Nil~~~~~~~kl~Dfg~~~~~~~~~~~-~~~~~~gt~~y~aPE~~~~~~~~~~~Di~slG~~l~~ll~g  208 (294)
T 4eqm_A          130 MRIVHRDIKPQNILIDSNKTLKIFDFGIAKALSETSLT-QTNHVLGTVQYFSPEQAKGEATDECTDIYSIGIVLYEMLVG  208 (294)
T ss_dssp             TTCCCCCCCGGGEEECTTSCEEECCCSSSTTC--------------CCSSCCHHHHHTCCCCTTHHHHHHHHHHHHHHHS
T ss_pred             CCcccCCCCHHHEEECCCCCEEEEeCCCcccccccccc-ccCccccCccccCHhHhcCCCCCchHhHHHHHHHHHHHHhC
Confidence            99999999999999999999999999998765433211 12335689999999999998999999999999999999999


Q ss_pred             CcccccccccCCCcccchHHHHHHHhhhcccCCCCCCccccCCCchhHHHHHHHHHHHHHHhccCCCCCCCCC
Q 044022          167 RIHIWDLLKDTHDHGCFFNEYLKNYLEDKRFTGIPAPIIVQDIPCIEKEQQLHASAQLTLECVNNSPEDRPTM  239 (241)
Q Consensus       167 ~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~cl~~~p~~Rpt~  239 (241)
                      +.||....         ..+......... ... ........        .+..+.+++.+||+.||++||+.
T Consensus       209 ~~pf~~~~---------~~~~~~~~~~~~-~~~-~~~~~~~~--------~~~~l~~li~~~l~~dp~~R~~~  262 (294)
T 4eqm_A          209 EPPFNGET---------AVSIAIKHIQDS-VPN-VTTDVRKD--------IPQSLSNVILRATEKDKANRYKT  262 (294)
T ss_dssp             SCSSCSSC---------HHHHHHHHHSSC-CCC-HHHHSCTT--------SCHHHHHHHHHHSCSSGGGSCSS
T ss_pred             CCCCCCCC---------hHHHHHHHhhcc-CCC-cchhcccC--------CCHHHHHHHHHHhcCCHhHcccc
Confidence            99995521         111111111111 000 00011111        22678899999999999999953


No 81 
>4e5w_A Tyrosine-protein kinase JAK1; kinase domain, transferase-transferase inhibit complex; HET: PTR 0NT; 1.86A {Homo sapiens} PDB: 4e4l_A* 4e4n_A* 4ehz_A* 4ei4_A* 4fk6_A* 3eyg_A* 3eyh_A*
Probab=100.00  E-value=2.5e-40  Score=266.61  Aligned_cols=225  Identities=23%  Similarity=0.247  Sum_probs=166.0

Q ss_pred             CcccccccccccHHHHHHHHHHHHhcCCCcccceeeeeeeC--CcceEEEEecCCCCHHHhhcCCC-----chHHHHHHH
Q 044022            1 MKFYGHEYHRHTYGSCINNITYAAQMSHNHILKRIGCCLQT--PIPILVFQSVEYGTLRDCIFGAP-----LPRLKIASD   73 (241)
Q Consensus         1 iK~~~~~~~~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~~~--~~~~lv~e~~~~~sL~~~l~~~~-----~~~~~~~~~   73 (241)
                      ||++..+......+.+.+|++++++++||||+++++++...  ...++||||+++++|.+++....     ..+..++.+
T Consensus        55 vK~~~~~~~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~  134 (302)
T 4e5w_A           55 VKSLKPESGGNHIADLKKEIEILRNLYHENIVKYKGICTEDGGNGIKLIMEFLPSGSLKEYLPKNKNKINLKQQLKYAVQ  134 (302)
T ss_dssp             EEEEC-----CCHHHHHHHHHHHHTCCCTTBCCEEEEEEC---CCEEEEEECCTTCBHHHHHHHHTTTCCHHHHHHHHHH
T ss_pred             EEEecccccchhHHHHHHHHHHHHhCCCCCeeeeeeEEecCCCceEEEEEEeCCCCcHHHHHHhccccCCHHHHHHHHHH
Confidence            46665555556678899999999999999999999999876  56899999999999999984321     146789999


Q ss_pred             HHHHhchhhcCCCCCceeccCCCCCeeecCCCCeEEeeccCceecCCCCcc-eeecccccCCCccCcccccccCCCcchh
Q 044022           74 IVNSLAYLHFGFPRPIVLRNFKTQNILFNEENVAKWFDFLLSISIPEGETH-ITTDRVIGTRGYSAPEYISICVLNEKSN  152 (241)
Q Consensus        74 i~~~l~~lh~~~~~~ivh~dl~~~nil~~~~~~~~l~df~~~~~~~~~~~~-~~~~~~~~~~~~~aPE~~~~~~~~~~~D  152 (241)
                      ++.||.|||   +.+++|+||||+||+++.++.++|+|||.+......... .......+|..|+|||.+.+..++.++|
T Consensus       135 i~~~l~~lH---~~~i~H~dikp~Nil~~~~~~~kl~Dfg~~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~D  211 (302)
T 4e5w_A          135 ICKGMDYLG---SRQYVHRDLAARNVLVESEHQVKIGDFGLTKAIETDKEYYTVKDDRDSPVFWYAPECLMQSKFYIASD  211 (302)
T ss_dssp             HHHHHHHHH---HTTEECSCCSGGGEEEEETTEEEECCCTTCEECCTTCCEEECCCCTTCCGGGCCHHHHHHCEEEHHHH
T ss_pred             HHHHHHHhh---cCCcccCCCchheEEEcCCCCEEECcccccccccCCCcceeccCCCCCCccccCCeeecCCCCCcchh
Confidence            999999999   899999999999999999999999999999876554322 2223455778899999999888999999


Q ss_pred             hHHHHHHHHHHHhcCccccccccc-----CCCcccchHHHHHHHhhhcccCCCCCCccccCCCchhHHHHHHHHHHHHHH
Q 044022          153 VFSFGAFLFELLAGRIHIWDLLKD-----THDHGCFFNEYLKNYLEDKRFTGIPAPIIVQDIPCIEKEQQLHASAQLTLE  227 (241)
Q Consensus       153 i~s~G~~~~~~~~g~~p~~~~~~~-----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~  227 (241)
                      |||||+++|+|++|..|+......     .......................     ...        ..++.+.+++.+
T Consensus       212 i~slG~il~~l~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-----~~~--------~~~~~l~~li~~  278 (302)
T 4e5w_A          212 VWSFGVTLHELLTYCDSDSSPMALFLKMIGPTHGQMTVTRLVNTLKEGKRLP-----CPP--------NCPDEVYQLMRK  278 (302)
T ss_dssp             HHHHHHHHHHHHTTTCGGGSHHHHHHHHHCSCCGGGHHHHHHHHHHTTCCCC-----CCT--------TCCHHHHHHHHH
T ss_pred             HHHHHHHHHHHHHccCCCcchhhHHhhccCCcccccCHHHHHHHHhccCCCC-----CCC--------CCCHHHHHHHHH
Confidence            999999999999999987442110     00011111111111111111111     111        122678999999


Q ss_pred             hccCCCCCCCCCCC
Q 044022          228 CVNNSPEDRPTMVD  241 (241)
Q Consensus       228 cl~~~p~~Rpt~~e  241 (241)
                      ||+.||++|||++|
T Consensus       279 ~l~~dp~~Rps~~~  292 (302)
T 4e5w_A          279 CWEFQPSNRTSFQN  292 (302)
T ss_dssp             TTCSSGGGSCCHHH
T ss_pred             HcCCCCCCCCCHHH
Confidence            99999999999853


No 82 
>2xir_A Vascular endothelial growth factor receptor 2; angiogenesis, nucleotide-binding, inhibitor, phosphorylation receptor, transferase, transmembrane; HET: 00J; 1.50A {Homo sapiens} PDB: 1vr2_A* 1ywn_A* 3vnt_A* 3c7q_A* 2oh4_A* 3u6j_A* 3efl_A* 2p2i_A* 3cjf_A* 3cjg_A* 3ewh_A* 2qu5_A* 2qu6_A* 2rl5_A* 3b8q_A* 3b8r_A* 2p2h_A* 3cp9_A* 3cpb_A* 3cpc_A* ...
Probab=100.00  E-value=2e-40  Score=268.71  Aligned_cols=216  Identities=21%  Similarity=0.352  Sum_probs=168.0

Q ss_pred             CcccccccccccHHHHHHHHHHHHhc-CCCcccceeeeeeeCC-cceEEEEecCCCCHHHhhcCCC--------------
Q 044022            1 MKFYGHEYHRHTYGSCINNITYAAQM-SHNHILKRIGCCLQTP-IPILVFQSVEYGTLRDCIFGAP--------------   64 (241)
Q Consensus         1 iK~~~~~~~~~~~~~~~~e~~~l~~l-~h~~iv~~~~~~~~~~-~~~lv~e~~~~~sL~~~l~~~~--------------   64 (241)
                      ||++.........+.+.+|+++++++ +||||+++++++...+ ..++||||+++++|.+++....              
T Consensus        62 vK~~~~~~~~~~~~~~~~E~~~l~~l~~hp~iv~~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~  141 (316)
T 2xir_A           62 VKMLKEGATHSEHRALMSELKILIHIGHHLNVVNLLGACTKPGGPLMVIVEFCKFGNLSTYLRSKRNEFVPYKVAPEDLY  141 (316)
T ss_dssp             EEEECTTCCHHHHHHHHHHHHHHHHHCCCTTBCCEEEEECCTTSCCEEEEECCTTEEHHHHHHTCTTSEECC-------C
T ss_pred             EEecccCCCcHHHHHHHHHHHHHHhcccCCCeeeEEEEEecCCCceEEEEEcCCCCcHHHHHHhcccccccccccchhhh
Confidence            35555444444567899999999999 7899999999988755 5899999999999999987642              


Q ss_pred             ---c---hHHHHHHHHHHHhchhhcCCCCCceeccCCCCCeeecCCCCeEEeeccCceecCCCCcceeecccccCCCccC
Q 044022           65 ---L---PRLKIASDIVNSLAYLHFGFPRPIVLRNFKTQNILFNEENVAKWFDFLLSISIPEGETHITTDRVIGTRGYSA  138 (241)
Q Consensus        65 ---~---~~~~~~~~i~~~l~~lh~~~~~~ivh~dl~~~nil~~~~~~~~l~df~~~~~~~~~~~~~~~~~~~~~~~~~a  138 (241)
                         .   ....++.+++.||.|||   +.+++||||||+||+++.++.++|+|||.+................+++.|+|
T Consensus       142 ~~~~~~~~~~~~~~qi~~al~~lH---~~~i~H~dikp~Nil~~~~~~~kl~Dfg~~~~~~~~~~~~~~~~~~~t~~y~a  218 (316)
T 2xir_A          142 KDFLTLEHLICYSFQVAKGMEFLA---SRKCIHRDLAARNILLSEKNVVKICDFGLARDIYKDPDYVRKGDARLPLKWMA  218 (316)
T ss_dssp             TTCEEHHHHHHHHHHHHHHHHHHH---HTTCCCSCCSGGGEEECGGGCEEECCCGGGSCTTTCTTSEEETTEEECGGGCC
T ss_pred             ccccCHHHHHHHHHHHHHHHHHHH---hCCcccccCccceEEECCCCCEEECCCccccccccCccceeccCCCcceeecC
Confidence               1   35778999999999999   89999999999999999999999999999987655444344445567889999


Q ss_pred             cccccccCCCcchhhHHHHHHHHHHHh-cCcccccccccCCCcccchHHHHHHHhhhcccCCCCCCccccCCCchhHHHH
Q 044022          139 PEYISICVLNEKSNVFSFGAFLFELLA-GRIHIWDLLKDTHDHGCFFNEYLKNYLEDKRFTGIPAPIIVQDIPCIEKEQQ  217 (241)
Q Consensus       139 PE~~~~~~~~~~~Di~s~G~~~~~~~~-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  217 (241)
                      ||.+.+..++.++||||||+++|+|++ |..||......        ...... ...+.....+     ..        .
T Consensus       219 PE~~~~~~~~~~~Di~slG~il~~l~t~g~~p~~~~~~~--------~~~~~~-~~~~~~~~~~-----~~--------~  276 (316)
T 2xir_A          219 PETIFDRVYTIQSDVWSFGVLLWEIFSLGASPYPGVKID--------EEFCRR-LKEGTRMRAP-----DY--------T  276 (316)
T ss_dssp             HHHHHHCCCCHHHHHHHHHHHHHHHHTTSCCSSTTCCCS--------HHHHHH-HHHTCCCCCC-----TT--------C
T ss_pred             chhhccccccchhHHHHHHHHHHHHHhCCCCCCcccchh--------HHHHHH-hccCccCCCC-----CC--------C
Confidence            999998899999999999999999998 99999542111        111111 1122111111     11        1


Q ss_pred             HHHHHHHHHHhccCCCCCCCCCCC
Q 044022          218 LHASAQLTLECVNNSPEDRPTMVD  241 (241)
Q Consensus       218 ~~~~~~l~~~cl~~~p~~Rpt~~e  241 (241)
                      +..+.+++.+||+.||++|||++|
T Consensus       277 ~~~l~~li~~~l~~dp~~Rps~~e  300 (316)
T 2xir_A          277 TPEMYQTMLDCWHGEPSQRPTFSE  300 (316)
T ss_dssp             CHHHHHHHHHHTCSSGGGSCCHHH
T ss_pred             CHHHHHHHHHHcCCChhhCcCHHH
Confidence            257889999999999999999853


No 83 
>3niz_A Rhodanese family protein; structural genomics, structural genomics consortium, SGC, phosphotransferase, cyclin dependent kinase; HET: ADP; 2.40A {Cryptosporidium parvum} SCOP: d.144.1.7 PDB: 2qkr_A*
Probab=100.00  E-value=1.2e-39  Score=264.13  Aligned_cols=155  Identities=20%  Similarity=0.250  Sum_probs=133.7

Q ss_pred             cHHHHHHHHHHHHhcCCCcccceeeeeeeCCcceEEEEecCCCCHHHhhcCCCc-----hHHHHHHHHHHHhchhhcCCC
Q 044022           12 TYGSCINNITYAAQMSHNHILKRIGCCLQTPIPILVFQSVEYGTLRDCIFGAPL-----PRLKIASDIVNSLAYLHFGFP   86 (241)
Q Consensus        12 ~~~~~~~e~~~l~~l~h~~iv~~~~~~~~~~~~~lv~e~~~~~sL~~~l~~~~~-----~~~~~~~~i~~~l~~lh~~~~   86 (241)
                      ....+.+|++++++++||||+++++++..++..++||||++ ++|.+.+.....     ....++.|++.||.|||   +
T Consensus        62 ~~~~~~~E~~~l~~l~hp~iv~~~~~~~~~~~~~lv~e~~~-~~l~~~~~~~~~~~~~~~~~~~~~qi~~~l~~LH---~  137 (311)
T 3niz_A           62 IPSTAIREISLLKELHHPNIVSLIDVIHSERCLTLVFEFME-KDLKKVLDENKTGLQDSQIKIYLYQLLRGVAHCH---Q  137 (311)
T ss_dssp             HHHHHHHHHHHHHHCCCTTBCCEEEEECCSSCEEEEEECCS-EEHHHHHHTCTTCCCHHHHHHHHHHHHHHHHHHH---H
T ss_pred             hhHHHHHHHHHHHHcCCCCEeeeeeEEccCCEEEEEEcCCC-CCHHHHHHhccCCCCHHHHHHHHHHHHHHHHHHH---H
Confidence            45678899999999999999999999999999999999997 588887765421     46788999999999999   8


Q ss_pred             CCceeccCCCCCeeecCCCCeEEeeccCceecCCCCcceeecccccCCCccCcccccc-cCCCcchhhHHHHHHHHHHHh
Q 044022           87 RPIVLRNFKTQNILFNEENVAKWFDFLLSISIPEGETHITTDRVIGTRGYSAPEYISI-CVLNEKSNVFSFGAFLFELLA  165 (241)
Q Consensus        87 ~~ivh~dl~~~nil~~~~~~~~l~df~~~~~~~~~~~~~~~~~~~~~~~~~aPE~~~~-~~~~~~~Di~s~G~~~~~~~~  165 (241)
                      .+++||||||+|||++.++.+||+|||.+.........  .....+|+.|+|||++.+ ..++.++||||||+++|+|++
T Consensus       138 ~~ivH~Dikp~NIl~~~~~~~kl~Dfg~a~~~~~~~~~--~~~~~~t~~y~aPE~~~~~~~~~~~~DiwslG~il~~ll~  215 (311)
T 3niz_A          138 HRILHRDLKPQNLLINSDGALKLADFGLARAFGIPVRS--YTHEVVTLWYRAPDVLMGSKKYSTSVDIWSIGCIFAEMIT  215 (311)
T ss_dssp             TTEECCCCCGGGEEECTTCCEEECCCTTCEETTSCCC-----CCCCCCTTCCHHHHTTCCSCCTHHHHHHHHHHHHHHHH
T ss_pred             CCcccCCCchHhEEECCCCCEEEccCcCceecCCCccc--ccCCcccCCcCCHHHhcCCCCCCchHHhHHHHHHHHHHHh
Confidence            99999999999999999999999999999876533221  133468999999999876 468999999999999999999


Q ss_pred             cCccccc
Q 044022          166 GRIHIWD  172 (241)
Q Consensus       166 g~~p~~~  172 (241)
                      |+.||..
T Consensus       216 g~~pf~~  222 (311)
T 3niz_A          216 GKPLFPG  222 (311)
T ss_dssp             SSCSCCC
T ss_pred             CCCCCCC
Confidence            9999965


No 84 
>3v8s_A RHO-associated protein kinase 1; dimerization, myosin, transferase, inhibitor, transf transferase inhibitor complex; HET: 0HD; 2.29A {Homo sapiens} PDB: 3twj_A* 3tv7_A* 2etr_A* 2esm_A* 2eto_A* 2etk_A* 3d9v_A* 3ncz_A* 3ndm_A* 2v55_A* 2f2u_A* 2h9v_A*
Probab=100.00  E-value=1.7e-40  Score=278.00  Aligned_cols=207  Identities=15%  Similarity=0.207  Sum_probs=163.5

Q ss_pred             ccHHHHHHHHHHHHhcCCCcccceeeeeeeCCcceEEEEecCCCCHHHhhcCCCc---hHHHHHHHHHHHhchhhcCCCC
Q 044022           11 HTYGSCINNITYAAQMSHNHILKRIGCCLQTPIPILVFQSVEYGTLRDCIFGAPL---PRLKIASDIVNSLAYLHFGFPR   87 (241)
Q Consensus        11 ~~~~~~~~e~~~l~~l~h~~iv~~~~~~~~~~~~~lv~e~~~~~sL~~~l~~~~~---~~~~~~~~i~~~l~~lh~~~~~   87 (241)
                      .....+.+|+.+++.++||||++++++|...+..++||||+++|+|.+++.....   ....++.+|+.||.|||   ++
T Consensus       111 ~~~~~~~~E~~il~~l~hp~Iv~l~~~~~~~~~~~lV~E~~~gg~L~~~l~~~~~~e~~~~~~~~qi~~aL~~LH---~~  187 (410)
T 3v8s_A          111 SDSAFFWEERDIMAFANSPWVVQLFYAFQDDRYLYMVMEYMPGGDLVNLMSNYDVPEKWARFYTAEVVLALDAIH---SM  187 (410)
T ss_dssp             CCCSTHHHHHHHHHHCCCTTBCCEEEEEECSSEEEEEECCCTTEEHHHHHHHCCCCHHHHHHHHHHHHHHHHHHH---HT
T ss_pred             HHHHHHHHHHHHHHhCCCCCCCeEEEEEEECCEEEEEEeCCCCCcHHHHHHcCCCCHHHHHHHHHHHHHHHHHHH---HC
Confidence            3455688999999999999999999999999999999999999999999876543   46778999999999999   89


Q ss_pred             CceeccCCCCCeeecCCCCeEEeeccCceecCCCCcceeecccccCCCccCcccccccC----CCcchhhHHHHHHHHHH
Q 044022           88 PIVLRNFKTQNILFNEENVAKWFDFLLSISIPEGETHITTDRVIGTRGYSAPEYISICV----LNEKSNVFSFGAFLFEL  163 (241)
Q Consensus        88 ~ivh~dl~~~nil~~~~~~~~l~df~~~~~~~~~~~~~~~~~~~~~~~~~aPE~~~~~~----~~~~~Di~s~G~~~~~~  163 (241)
                      +|+||||||+|||++.++.+||+|||++........ .......||+.|+|||++.+..    ++.++||||||+++|+|
T Consensus       188 givHrDLKp~NILl~~~g~ikL~DFG~a~~~~~~~~-~~~~~~~gt~~Y~APE~l~~~~~~~~~~~~~DiwSlGvilyel  266 (410)
T 3v8s_A          188 GFIHRDVKPDNMLLDKSGHLKLADFGTCMKMNKEGM-VRCDTAVGTPDYISPEVLKSQGGDGYYGRECDWWSVGVFLYEM  266 (410)
T ss_dssp             TEECCCCSGGGEEECTTSCEEECCCTTCEECCTTSE-EECCSCCSCGGGCCHHHHHTTTTTCEEETHHHHHHHHHHHHHH
T ss_pred             CeEeccCCHHHeeECCCCCEEEeccceeEeeccCCc-ccccCCcCCccccCHHHhhccCCCcCCCCcceEecchHHHHHH
Confidence            999999999999999999999999999987654432 2224567999999999998655    78899999999999999


Q ss_pred             HhcCcccccccccCCCcccchHHHHHHHhhhcccCCCCCCccccCCCchhHHHHHHHHHHHHHHhccCCCCC--CCCCCC
Q 044022          164 LAGRIHIWDLLKDTHDHGCFFNEYLKNYLEDKRFTGIPAPIIVQDIPCIEKEQQLHASAQLTLECVNNSPED--RPTMVD  241 (241)
Q Consensus       164 ~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~cl~~~p~~--Rpt~~e  241 (241)
                      ++|+.||...         ...+..............+..   .        ..+..+.+|+.+||..+|.+  |||++|
T Consensus       267 l~G~~Pf~~~---------~~~~~~~~i~~~~~~~~~p~~---~--------~~s~~~~~li~~lL~~~~~rlgR~~~~e  326 (410)
T 3v8s_A          267 LVGDTPFYAD---------SLVGTYSKIMNHKNSLTFPDD---N--------DISKEAKNLICAFLTDREVRLGRNGVEE  326 (410)
T ss_dssp             HHSSCTTCCS---------SHHHHHHHHHTHHHHCCCCTT---C--------CCCHHHHHHHHHHSSCGGGCTTSSCHHH
T ss_pred             HhCCCCCCCC---------ChhhHHHHHHhccccccCCCc---c--------cccHHHHHHHHHHccChhhhCCCCCHHH
Confidence            9999999642         112222222221111111111   0        11257889999999999988  998753


No 85 
>3ugc_A Tyrosine-protein kinase JAK2; small molecule inhibitor, ATP binding, transferase-transfera inhibitor complex; HET: 046; 1.34A {} PDB: 3krr_A* 3lpb_A* 4aqc_A* 4e4m_A* 4f08_A* 4f09_A* 3q32_A* 3rvg_A* 4hge_A* 3tjc_A* 3tjd_A* 4bbe_A* 4bbf_A* 2b7a_A* 3fup_A* 3e64_A* 3e62_A* 3e63_A* 2xa4_A* 3iok_A* ...
Probab=100.00  E-value=1.7e-40  Score=266.93  Aligned_cols=215  Identities=23%  Similarity=0.313  Sum_probs=156.9

Q ss_pred             ccHHHHHHHHHHHHhcCCCcccceeeeeee--CCcceEEEEecCCCCHHHhhcCCCc-----hHHHHHHHHHHHhchhhc
Q 044022           11 HTYGSCINNITYAAQMSHNHILKRIGCCLQ--TPIPILVFQSVEYGTLRDCIFGAPL-----PRLKIASDIVNSLAYLHF   83 (241)
Q Consensus        11 ~~~~~~~~e~~~l~~l~h~~iv~~~~~~~~--~~~~~lv~e~~~~~sL~~~l~~~~~-----~~~~~~~~i~~~l~~lh~   83 (241)
                      ...+.+.+|++++++++||||+++++++..  ....++||||+++++|.+++.....     ....++.+++.||.||| 
T Consensus        53 ~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~qi~~~l~~lH-  131 (295)
T 3ugc_A           53 EHLRDFEREIEILKSLQHDNIVKYKGVCYSAGRRNLKLIMEYLPYGSLRDYLQKHKERIDHIKLLQYTSQICKGMEYLG-  131 (295)
T ss_dssp             HHHHHHHHHHHHHHTCCCTTBCCEEEEECHHHHTSCEEEEECCTTCBHHHHHHHCGGGCCHHHHHHHHHHHHHHHHHHH-
T ss_pred             HHHHHHHHHHHHHHhCCCCCEeeEEEEEecCCCCceEEEEEeCCCCCHHHHHHhcccccCHHHHHHHHHHHHHHHHHHh-
Confidence            345779999999999999999999999864  3568999999999999999865421     46789999999999999 


Q ss_pred             CCCCCceeccCCCCCeeecCCCCeEEeeccCceecCCCCcc-eeecccccCCCccCcccccccCCCcchhhHHHHHHHHH
Q 044022           84 GFPRPIVLRNFKTQNILFNEENVAKWFDFLLSISIPEGETH-ITTDRVIGTRGYSAPEYISICVLNEKSNVFSFGAFLFE  162 (241)
Q Consensus        84 ~~~~~ivh~dl~~~nil~~~~~~~~l~df~~~~~~~~~~~~-~~~~~~~~~~~~~aPE~~~~~~~~~~~Di~s~G~~~~~  162 (241)
                        +.+++||||||+||+++.++.+||+|||.+......... .......++..|+|||.+.+..++.++||||||+++|+
T Consensus       132 --~~~ivH~Dikp~Nil~~~~~~~kl~Dfg~~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~~l~~  209 (295)
T 3ugc_A          132 --TKRYIHRDLATRNILVENENRVKIGDFGLTKVLPQDKEFFKVKEPGESPIFWYAPESLTESKFSVASDVWSFGVVLYE  209 (295)
T ss_dssp             --HTTCCCSCCSGGGEEEEETTEEEECCCCSCC-------------CTTCGGGGCCHHHHHHCCCCHHHHHHHHHHHHHH
T ss_pred             --cCCcccCCCCHhhEEEcCCCeEEEccCcccccccCCcceeeeccCCCCccceeCcHHhcCCCCChHHHHHHHHHHHHH
Confidence              899999999999999999999999999999765443221 11223346677999999998999999999999999999


Q ss_pred             HHhcCccccccccc------CCCcccchHHHHHHHhhhcccCCCCCCccccCCCchhHHHHHHHHHHHHHHhccCCCCCC
Q 044022          163 LLAGRIHIWDLLKD------THDHGCFFNEYLKNYLEDKRFTGIPAPIIVQDIPCIEKEQQLHASAQLTLECVNNSPEDR  236 (241)
Q Consensus       163 ~~~g~~p~~~~~~~------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~cl~~~p~~R  236 (241)
                      |++|..|+......      ........................     ..        ..+..+.+++.+||+.||++|
T Consensus       210 l~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-----~~--------~~~~~l~~li~~~l~~dp~~R  276 (295)
T 3ugc_A          210 LFTYIEKSKSPPAEFMRMIGNDKQGQMIVFHLIELLKNNGRLPR-----PD--------GCPDEIYMIMTECWNNNVNQR  276 (295)
T ss_dssp             HHHTTCTTCSHHHHHHHHHCTTCCTHHHHHHHHHHHHTTCCCCC-----CT--------TCCHHHHHHHHHHSCSSGGGS
T ss_pred             HHhcccccCCChHHHHhhhcCccccchhHHHHHHHHhccCcCCC-----Cc--------CcCHHHHHHHHHHcCCChhhC
Confidence            99999988542111      000000001111111111111111     11        223678999999999999999


Q ss_pred             CCCCC
Q 044022          237 PTMVD  241 (241)
Q Consensus       237 pt~~e  241 (241)
                      ||++|
T Consensus       277 ps~~e  281 (295)
T 3ugc_A          277 PSFRD  281 (295)
T ss_dssp             CCHHH
T ss_pred             CCHHH
Confidence            99853


No 86 
>2y94_A 5'-AMP-activated protein kinase catalytic subunit; transferase, nucleotide-binding, staurosporine-binding, serine/threonine-protein kinase; HET: TPO STU AMP; 3.24A {Rattus norvegicus}
Probab=100.00  E-value=1.9e-39  Score=276.26  Aligned_cols=201  Identities=25%  Similarity=0.308  Sum_probs=162.6

Q ss_pred             ccHHHHHHHHHHHHhcCCCcccceeeeeeeCCcceEEEEecCCCCHHHhhcCCCc----hHHHHHHHHHHHhchhhcCCC
Q 044022           11 HTYGSCINNITYAAQMSHNHILKRIGCCLQTPIPILVFQSVEYGTLRDCIFGAPL----PRLKIASDIVNSLAYLHFGFP   86 (241)
Q Consensus        11 ~~~~~~~~e~~~l~~l~h~~iv~~~~~~~~~~~~~lv~e~~~~~sL~~~l~~~~~----~~~~~~~~i~~~l~~lh~~~~   86 (241)
                      .....+.+|+++++.++||||+++++++...+..++||||+++|+|.+++.....    ....++.||+.||.|||   +
T Consensus        58 ~~~~~~~~Ei~~l~~l~HpnIv~l~~~~~~~~~~~lv~E~~~gg~L~~~l~~~~~l~~~~~~~i~~qi~~aL~~LH---~  134 (476)
T 2y94_A           58 DVVGKIRREIQNLKLFRHPHIIKLYQVISTPSDIFMVMEYVSGGELFDYICKNGRLDEKESRRLFQQILSGVDYCH---R  134 (476)
T ss_dssp             TTHHHHHHHHHHHTTCCCTTBCCEEEEEECSSEEEEEEECCSSEEHHHHTTSSSSCCHHHHHHHHHHHHHHHHHHH---T
T ss_pred             HHHHHHHHHHHHHHhCCCCCCCcEEEEEEECCEEEEEEeCCCCCcHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHH---H
Confidence            3456789999999999999999999999999999999999999999999976532    46789999999999999   9


Q ss_pred             CCceeccCCCCCeeecCCCCeEEeeccCceecCCCCcceeecccccCCCccCcccccccCC-CcchhhHHHHHHHHHHHh
Q 044022           87 RPIVLRNFKTQNILFNEENVAKWFDFLLSISIPEGETHITTDRVIGTRGYSAPEYISICVL-NEKSNVFSFGAFLFELLA  165 (241)
Q Consensus        87 ~~ivh~dl~~~nil~~~~~~~~l~df~~~~~~~~~~~~~~~~~~~~~~~~~aPE~~~~~~~-~~~~Di~s~G~~~~~~~~  165 (241)
                      .+++||||||+|||++.++.+||+|||++........   .....||+.|+|||++.+..+ +.++||||||+++|+|++
T Consensus       135 ~givHrDLkp~NIll~~~~~vkL~DFG~a~~~~~~~~---~~~~~gt~~y~aPE~~~~~~~~~~~~DiwSlGvil~ellt  211 (476)
T 2y94_A          135 HMVVHRDLKPENVLLDAHMNAKIADFGLSNMMSDGEF---LRTSCGSPNYAAPEVISGRLYAGPEVDIWSSGVILYALLC  211 (476)
T ss_dssp             TTEECSCCSGGGEEECTTCCEEECCCSSCEECCTTCC---BCCCCSCSTTCCHHHHTTCCBCSHHHHHHHHHHHHHHHHH
T ss_pred             CCCCcccccHHHEEEecCCCeEEEeccchhhcccccc---ccccCCCcCeEChhhccCCCCCCCcceehhhHHHHHHHhh
Confidence            9999999999999999999999999999987654332   133478999999999987765 689999999999999999


Q ss_pred             cCcccccccccCCCcccchHHHHHHHhhhcccCCCCCCccccCCCchhHHHHHHHHHHHHHHhccCCCCCCCCCCC
Q 044022          166 GRIHIWDLLKDTHDHGCFFNEYLKNYLEDKRFTGIPAPIIVQDIPCIEKEQQLHASAQLTLECVNNSPEDRPTMVD  241 (241)
Q Consensus       166 g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~cl~~~p~~Rpt~~e  241 (241)
                      |..||....         ......... .+.. ..     ...        .+..+.+++.+||..||++|||++|
T Consensus       212 G~~Pf~~~~---------~~~~~~~i~-~~~~-~~-----p~~--------~s~~~~~Li~~~L~~dP~~Rpt~~e  263 (476)
T 2y94_A          212 GTLPFDDDH---------VPTLFKKIC-DGIF-YT-----PQY--------LNPSVISLLKHMLQVDPMKRATIKD  263 (476)
T ss_dssp             SSCSSCCSS---------SHHHHHHHH-TTCC-CC-----CTT--------CCHHHHHHHHHHTCSSTTTSCCHHH
T ss_pred             CCCCCCCCC---------HHHHHHHHh-cCCc-CC-----Ccc--------CCHHHHHHHHHHcCCCchhCcCHHH
Confidence            999996521         112222221 1111 00     111        1256889999999999999999853


No 87 
>3lzb_A Epidermal growth factor receptor; epidermal growth factor kinase domain, multitargeted small M kinase inhibitor; HET: ITI; 2.70A {Homo sapiens}
Probab=100.00  E-value=4.2e-40  Score=268.56  Aligned_cols=211  Identities=18%  Similarity=0.232  Sum_probs=157.0

Q ss_pred             cccccccccHHHHHHHHHHHHhcCCCcccceeeeeeeCCcceEEEEecCCCCHHHhhcCCC-----chHHHHHHHHHHHh
Q 044022            4 YGHEYHRHTYGSCINNITYAAQMSHNHILKRIGCCLQTPIPILVFQSVEYGTLRDCIFGAP-----LPRLKIASDIVNSL   78 (241)
Q Consensus         4 ~~~~~~~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~~~~~~~lv~e~~~~~sL~~~l~~~~-----~~~~~~~~~i~~~l   78 (241)
                      +.........+.+.+|+.++++++||||+++++++.... .++|++++.+|+|.+++....     ...+.++.|++.||
T Consensus        52 ~~~~~~~~~~~~~~~E~~~l~~l~hp~iv~~~~~~~~~~-~~~v~~~~~~g~L~~~l~~~~~~~~~~~~~~i~~qi~~aL  130 (327)
T 3lzb_A           52 LREATSPKANKEILDEAYVMASVDNPHVCRLLGICLTST-VQLITQLMPFGCLLDYVREHKDNIGSQYLLNWCVQIAKGM  130 (327)
T ss_dssp             ECCCSSCCCHHHHHHHHHHHTTCCBTTBCCCCEEEESSS-EEEEECCCSSCBHHHHHHHTTTCCCHHHHHHHHHHHHHHH
T ss_pred             eccccCHHHHHHHHHHHHHHHhCCCCCeeEEEEEEecCC-ceEEEEecCCCcHHHHHHhcCCCCCHHHHHHHHHHHHHHH
Confidence            333334456788999999999999999999999998765 789999999999999986532     14678999999999


Q ss_pred             chhhcCCCCCceeccCCCCCeeecCCCCeEEeeccCceecCCCCcceeecccccCCCccCcccccccCCCcchhhHHHHH
Q 044022           79 AYLHFGFPRPIVLRNFKTQNILFNEENVAKWFDFLLSISIPEGETHITTDRVIGTRGYSAPEYISICVLNEKSNVFSFGA  158 (241)
Q Consensus        79 ~~lh~~~~~~ivh~dl~~~nil~~~~~~~~l~df~~~~~~~~~~~~~~~~~~~~~~~~~aPE~~~~~~~~~~~Di~s~G~  158 (241)
                      .|||   +.+++||||||+|||++.++.+||+|||++................+++.|+|||.+.+..++.++||||||+
T Consensus       131 ~~LH---~~~ivH~Dikp~NIl~~~~~~~kL~DfG~a~~~~~~~~~~~~~~~~~t~~y~aPE~~~~~~~~~~~Di~slG~  207 (327)
T 3lzb_A          131 NYLE---DRRLVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEYHAEGGKVPIKWMALESILHRIYTHQSDVWSYGV  207 (327)
T ss_dssp             HHHH---HTTCCCSCCCGGGEEEEETTEEEECCTTC----------------CCCGGGSCHHHHHHCCCCHHHHHHHHHH
T ss_pred             HHHh---hCCCcCCCCCHHHEEEcCCCCEEEccCcceeEccCccccccccCCCccccccCHHHHcCCCCChHHHHHHHHH
Confidence            9999   8999999999999999999999999999998765443333333345677899999999999999999999999


Q ss_pred             HHHHHHh-cCcccccccccCCCcccchHHHHHHHhhhcccCCCCCCccccCCCchhHHHHHHHHHHHHHHhccCCCCCCC
Q 044022          159 FLFELLA-GRIHIWDLLKDTHDHGCFFNEYLKNYLEDKRFTGIPAPIIVQDIPCIEKEQQLHASAQLTLECVNNSPEDRP  237 (241)
Q Consensus       159 ~~~~~~~-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~cl~~~p~~Rp  237 (241)
                      ++|+|++ |..||......         +..... ........     ..        ..+..+.+++.+||+.||.+||
T Consensus       208 il~ell~~g~~p~~~~~~~---------~~~~~~-~~~~~~~~-----~~--------~~~~~l~~li~~~l~~dp~~Rp  264 (327)
T 3lzb_A          208 TVWELMTFGSKPYDGIPAS---------EISSIL-EKGERLPQ-----PP--------ICTIDVYMIMRKCWMIDADSRP  264 (327)
T ss_dssp             HHHHHHTTSCCTTTTCCGG---------GHHHHH-HTTCCCCC-----CT--------TBCHHHHHHHHHHTCSSGGGSC
T ss_pred             HHHHHHHCCCCCCCCCCHH---------HHHHHH-HcCCCCCC-----Cc--------cCCHHHHHHHHHHcCCChhHCc
Confidence            9999999 99999652211         111111 11111111     11        1225688999999999999999


Q ss_pred             CCCC
Q 044022          238 TMVD  241 (241)
Q Consensus       238 t~~e  241 (241)
                      |++|
T Consensus       265 s~~e  268 (327)
T 3lzb_A          265 KFRE  268 (327)
T ss_dssp             CHHH
T ss_pred             CHHH
Confidence            9753


No 88 
>2x4f_A Myosin light chain kinase family member 4; LUNG, breast cancer, transferase, serine/threonine-protein kinase, nucleotide-binding; HET: 16X 1PE; 2.67A {Homo sapiens}
Probab=100.00  E-value=3.1e-40  Score=273.77  Aligned_cols=204  Identities=20%  Similarity=0.232  Sum_probs=161.7

Q ss_pred             cHHHHHHHHHHHHhcCCCcccceeeeeeeCCcceEEEEecCCCCHHHhhcCCC-----chHHHHHHHHHHHhchhhcCCC
Q 044022           12 TYGSCINNITYAAQMSHNHILKRIGCCLQTPIPILVFQSVEYGTLRDCIFGAP-----LPRLKIASDIVNSLAYLHFGFP   86 (241)
Q Consensus        12 ~~~~~~~e~~~l~~l~h~~iv~~~~~~~~~~~~~lv~e~~~~~sL~~~l~~~~-----~~~~~~~~~i~~~l~~lh~~~~   86 (241)
                      ..+.+.+|++++++++||||+++++++...+..++||||+++++|.+++....     .....++.|++.||.|||   +
T Consensus       129 ~~~~~~~E~~~l~~l~hpnIv~~~~~~~~~~~~~lv~E~~~~~~L~~~l~~~~~~l~~~~~~~i~~qi~~aL~~LH---~  205 (373)
T 2x4f_A          129 DKEEVKNEISVMNQLDHANLIQLYDAFESKNDIVLVMEYVDGGELFDRIIDESYNLTELDTILFMKQICEGIRHMH---Q  205 (373)
T ss_dssp             HHHHHHHHHHHHTTCCCTTBCCEEEEEECSSEEEEEEECCTTCEEHHHHHHTGGGCCHHHHHHHHHHHHHHHHHHH---H
T ss_pred             cHHHHHHHHHHHHhCCCCCCCeEEEEEEECCEEEEEEeCCCCCcHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHH---H
Confidence            46779999999999999999999999999999999999999999998875432     246788999999999999   8


Q ss_pred             CCceeccCCCCCeee--cCCCCeEEeeccCceecCCCCcceeecccccCCCccCcccccccCCCcchhhHHHHHHHHHHH
Q 044022           87 RPIVLRNFKTQNILF--NEENVAKWFDFLLSISIPEGETHITTDRVIGTRGYSAPEYISICVLNEKSNVFSFGAFLFELL  164 (241)
Q Consensus        87 ~~ivh~dl~~~nil~--~~~~~~~l~df~~~~~~~~~~~~~~~~~~~~~~~~~aPE~~~~~~~~~~~Di~s~G~~~~~~~  164 (241)
                      .+++||||||+|||+  +.++.+||+|||++.........   ....||+.|+|||++.+..++.++||||||+++|+|+
T Consensus       206 ~~ivH~Dlkp~NIll~~~~~~~~kl~DFG~a~~~~~~~~~---~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~ell  282 (373)
T 2x4f_A          206 MYILHLDLKPENILCVNRDAKQIKIIDFGLARRYKPREKL---KVNFGTPEFLAPEVVNYDFVSFPTDMWSVGVIAYMLL  282 (373)
T ss_dssp             TTEECCCCCGGGEEEEETTTTEEEECCCSSCEECCTTCBC---CCCCSSCTTCCHHHHTTCBCCHHHHHHHHHHHHHHHH
T ss_pred             CCcccccCCHHHEEEecCCCCcEEEEeCCCceecCCcccc---ccccCCCcEeChhhccCCCCCcHHhHHHHHHHHHHHH
Confidence            999999999999999  56788999999999876543321   2346899999999999888999999999999999999


Q ss_pred             hcCcccccccccCCCcccchHHHHHHHhhhcccCCCCCCccccCCCchhHHHHHHHHHHHHHHhccCCCCCCCCCCC
Q 044022          165 AGRIHIWDLLKDTHDHGCFFNEYLKNYLEDKRFTGIPAPIIVQDIPCIEKEQQLHASAQLTLECVNNSPEDRPTMVD  241 (241)
Q Consensus       165 ~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~cl~~~p~~Rpt~~e  241 (241)
                      +|..||....         ..+......... . .... ....        ..++.+.+|+.+||+.||++|||++|
T Consensus       283 tg~~pf~~~~---------~~~~~~~i~~~~-~-~~~~-~~~~--------~~~~~~~~li~~~L~~dp~~Rps~~e  339 (373)
T 2x4f_A          283 SGLSPFLGDN---------DAETLNNILACR-W-DLED-EEFQ--------DISEEAKEFISKLLIKEKSWRISASE  339 (373)
T ss_dssp             HSSCTTCCSS---------HHHHHHHHHHTC-C-CSCS-GGGT--------TSCHHHHHHHHTTSCSSGGGSCCHHH
T ss_pred             hCCCCCCCCC---------HHHHHHHHHhcc-C-CCCh-hhhc--------cCCHHHHHHHHHHcCCChhhCCCHHH
Confidence            9999995421         112222222111 0 1111 1111        12367899999999999999999853


No 89 
>3a62_A Ribosomal protein S6 kinase beta-1; kinase domain, inactive, active, ribosomal S6 kinase, activation, alternative initiation, ATP-binding; HET: TPO STU; 2.35A {Homo sapiens} PDB: 3a61_A* 3a60_A*
Probab=100.00  E-value=1.9e-39  Score=264.61  Aligned_cols=199  Identities=19%  Similarity=0.201  Sum_probs=151.7

Q ss_pred             cHHHHHHHHHHHHhcCCCcccceeeeeeeCCcceEEEEecCCCCHHHhhcCCC----chHHHHHHHHHHHhchhhcCCCC
Q 044022           12 TYGSCINNITYAAQMSHNHILKRIGCCLQTPIPILVFQSVEYGTLRDCIFGAP----LPRLKIASDIVNSLAYLHFGFPR   87 (241)
Q Consensus        12 ~~~~~~~e~~~l~~l~h~~iv~~~~~~~~~~~~~lv~e~~~~~sL~~~l~~~~----~~~~~~~~~i~~~l~~lh~~~~~   87 (241)
                      ....+.+|++++++++||||+++++++...+..++||||+++++|.+++....    .....++.+++.||.|||   +.
T Consensus        64 ~~~~~~~E~~~l~~l~hp~iv~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~qi~~al~~lH---~~  140 (327)
T 3a62_A           64 DTAHTKAERNILEEVKHPFIVDLIYAFQTGGKLYLILEYLSGGELFMQLEREGIFMEDTACFYLAEISMALGHLH---QK  140 (327)
T ss_dssp             -------HHHHHHHCCCTTBCCEEEEEECSSCEEEEEECCTTEEHHHHHHHHSSCCHHHHHHHHHHHHHHHHHHH---HT
T ss_pred             HHHHHHHHHHHHHhCCCCCccceeEEEEcCCEEEEEEeCCCCCcHHHHHHhCCCCCHHHHHHHHHHHHHHHHHHH---hC
Confidence            45668899999999999999999999999999999999999999999986532    246778999999999999   89


Q ss_pred             CceeccCCCCCeeecCCCCeEEeeccCceecCCCCcceeecccccCCCccCcccccccCCCcchhhHHHHHHHHHHHhcC
Q 044022           88 PIVLRNFKTQNILFNEENVAKWFDFLLSISIPEGETHITTDRVIGTRGYSAPEYISICVLNEKSNVFSFGAFLFELLAGR  167 (241)
Q Consensus        88 ~ivh~dl~~~nil~~~~~~~~l~df~~~~~~~~~~~~~~~~~~~~~~~~~aPE~~~~~~~~~~~Di~s~G~~~~~~~~g~  167 (241)
                      +++||||||+|||++.++.+||+|||++........  ......|++.|+|||.+.+..++.++||||||+++|+|++|+
T Consensus       141 ~ivH~Dlkp~Nill~~~~~~kl~Dfg~~~~~~~~~~--~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~el~~g~  218 (327)
T 3a62_A          141 GIIYRDLKPENIMLNHQGHVKLTDFGLCKESIHDGT--VTHTFCGTIEYMAPEILMRSGHNRAVDWWSLGALMYDMLTGA  218 (327)
T ss_dssp             TCCCCCCCTTTEEECTTSCEEECCCSCC------------CTTSSCCTTSCHHHHTTSCCCTHHHHHHHHHHHHHHHHSS
T ss_pred             CEEcccCCHHHeEECCCCcEEEEeCCcccccccCCc--cccccCCCcCccCHhhCcCCCCCCcccchhHHHHHHHHHHCC
Confidence            999999999999999999999999999875433221  123456899999999999888999999999999999999999


Q ss_pred             cccccccccCCCcccchHHHHHHHhhhcccCCCCCCccccCCCchhHHHHHHHHHHHHHHhccCCCCCCCCC
Q 044022          168 IHIWDLLKDTHDHGCFFNEYLKNYLEDKRFTGIPAPIIVQDIPCIEKEQQLHASAQLTLECVNNSPEDRPTM  239 (241)
Q Consensus       168 ~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~cl~~~p~~Rpt~  239 (241)
                      .||....         ..+......... . .     +...        .+..+.+++.+||+.||++||++
T Consensus       219 ~pf~~~~---------~~~~~~~i~~~~-~-~-----~p~~--------~~~~~~~li~~~L~~dp~~R~~~  266 (327)
T 3a62_A          219 PPFTGEN---------RKKTIDKILKCK-L-N-----LPPY--------LTQEARDLLKKLLKRNAASRLGA  266 (327)
T ss_dssp             CSCCCSS---------HHHHHHHHHHTC-C-C-----CCTT--------SCHHHHHHHHHHSCSCGGGSTTS
T ss_pred             CCCCCCC---------HHHHHHHHHhCC-C-C-----CCCC--------CCHHHHHHHHHHHhcCHhhccCC
Confidence            9996521         112222222111 0 1     1111        12578899999999999999965


No 90 
>2a2a_A Death-associated protein kinase 2; autoinhibition, transferase; 1.47A {Homo sapiens} PDB: 2cke_A* 1wmk_A 1z9x_A 2a27_A 2x0g_A 2xuu_A* 2w4k_A* 2xzs_A
Probab=100.00  E-value=1.4e-39  Score=264.72  Aligned_cols=204  Identities=19%  Similarity=0.264  Sum_probs=163.4

Q ss_pred             cHHHHHHHHHHHHhcCCCcccceeeeeeeCCcceEEEEecCCCCHHHhhcCCCc----hHHHHHHHHHHHhchhhcCCCC
Q 044022           12 TYGSCINNITYAAQMSHNHILKRIGCCLQTPIPILVFQSVEYGTLRDCIFGAPL----PRLKIASDIVNSLAYLHFGFPR   87 (241)
Q Consensus        12 ~~~~~~~e~~~l~~l~h~~iv~~~~~~~~~~~~~lv~e~~~~~sL~~~l~~~~~----~~~~~~~~i~~~l~~lh~~~~~   87 (241)
                      ..+.+.+|+.++++++||||+++++++...+..++||||+++++|.+++.....    ....++.+++.||.|||   +.
T Consensus        58 ~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~i~~qi~~aL~~lH---~~  134 (321)
T 2a2a_A           58 SREEIEREVSILRQVLHHNVITLHDVYENRTDVVLILELVSGGELFDFLAQKESLSEEEATSFIKQILDGVNYLH---TK  134 (321)
T ss_dssp             CHHHHHHHHHHHHHCCCTTBCCEEEEEECSSEEEEEECCCCSCBHHHHHHTCSCEEHHHHHHHHHHHHHHHHHHH---HT
T ss_pred             hHHHHHHHHHHHHhCCCCCcceEEEEEecCCEEEEEEEcCCCCcHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHH---hC
Confidence            467799999999999999999999999999999999999999999999976532    46789999999999999   89


Q ss_pred             CceeccCCCCCeeecCCC----CeEEeeccCceecCCCCcceeecccccCCCccCcccccccCCCcchhhHHHHHHHHHH
Q 044022           88 PIVLRNFKTQNILFNEEN----VAKWFDFLLSISIPEGETHITTDRVIGTRGYSAPEYISICVLNEKSNVFSFGAFLFEL  163 (241)
Q Consensus        88 ~ivh~dl~~~nil~~~~~----~~~l~df~~~~~~~~~~~~~~~~~~~~~~~~~aPE~~~~~~~~~~~Di~s~G~~~~~~  163 (241)
                      +++|+||||+||+++.++    .++|+|||.+........   .....|++.|+|||.+.+..++.++||||||+++|+|
T Consensus       135 ~ivH~dikp~NIl~~~~~~~~~~~kl~Dfg~~~~~~~~~~---~~~~~gt~~y~aPE~~~~~~~~~~~Di~slG~il~~l  211 (321)
T 2a2a_A          135 KIAHFDLKPENIMLLDKNIPIPHIKLIDFGLAHEIEDGVE---FKNIFGTPEFVAPEIVNYEPLGLEADMWSIGVITYIL  211 (321)
T ss_dssp             TEECCCCSGGGEEESCTTSSSCCEEECCCTTCEECCTTCC---CCCCCSCGGGCCHHHHTTCCCCTHHHHHHHHHHHHHH
T ss_pred             CeecCCCChHHEEEecCCCCcCCEEEccCccceecCcccc---ccccCCCCCccCcccccCCCCCCccccHHHHHHHHHH
Confidence            999999999999999888    799999999987654322   1234689999999999988999999999999999999


Q ss_pred             HhcCcccccccccCCCcccchHHHHHHHhhhcccCCCCCCccccCCCchhHHHHHHHHHHHHHHhccCCCCCCCCCCC
Q 044022          164 LAGRIHIWDLLKDTHDHGCFFNEYLKNYLEDKRFTGIPAPIIVQDIPCIEKEQQLHASAQLTLECVNNSPEDRPTMVD  241 (241)
Q Consensus       164 ~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~cl~~~p~~Rpt~~e  241 (241)
                      ++|..||....         ..+......... .  ...+....        ..+..+.+++.+||+.||++|||++|
T Consensus       212 ~~g~~pf~~~~---------~~~~~~~i~~~~-~--~~~~~~~~--------~~~~~~~~li~~~l~~dp~~Rps~~e  269 (321)
T 2a2a_A          212 LSGASPFLGDT---------KQETLANITSVS-Y--DFDEEFFS--------HTSELAKDFIRKLLVKETRKRLTIQE  269 (321)
T ss_dssp             HHSCCSSCCSS---------HHHHHHHHHTTC-C--CCCHHHHT--------TCCHHHHHHHHTTSCSSTTTSCCHHH
T ss_pred             HHCCCCCCCCC---------HHHHHHHHHhcc-c--ccChhhhc--------ccCHHHHHHHHHHcCCChhhCcCHHH
Confidence            99999995421         112222211111 0  00111111        22357899999999999999999753


No 91 
>3a7i_A MST3 kinase, serine/threonine kinase 24 (STE20 homolog, yeast); two-LOBE protein kinase fold, ATP-binding, nucleotid binding, transferase; HET: TPO ADE; 1.45A {Homo sapiens} PDB: 3a7g_A* 3a7h_A* 3a7f_A* 3a7j_A* 3ckw_A 3ckx_A* 3ggf_A* 2xik_A*
Probab=100.00  E-value=1.2e-39  Score=262.85  Aligned_cols=213  Identities=22%  Similarity=0.304  Sum_probs=170.4

Q ss_pred             CcccccccccccHHHHHHHHHHHHhcCCCcccceeeeeeeCCcceEEEEecCCCCHHHhhcCCCc---hHHHHHHHHHHH
Q 044022            1 MKFYGHEYHRHTYGSCINNITYAAQMSHNHILKRIGCCLQTPIPILVFQSVEYGTLRDCIFGAPL---PRLKIASDIVNS   77 (241)
Q Consensus         1 iK~~~~~~~~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~~~~~~~lv~e~~~~~sL~~~l~~~~~---~~~~~~~~i~~~   77 (241)
                      ||++.........+.+.+|+.++++++||||+++++++...+..++||||+++++|.+++.....   ....++.+++.|
T Consensus        52 iK~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~~~~~~L~~~~~~~~~~~~~~~~~~~qi~~~  131 (303)
T 3a7i_A           52 IKIIDLEEAEDEIEDIQQEITVLSQCDSPYVTKYYGSYLKDTKLWIIMEYLGGGSALDLLEPGPLDETQIATILREILKG  131 (303)
T ss_dssp             EEEEETTTCSTTHHHHHHHHHHHHHCCCTTBCCEEEEEEETTEEEEEEECCTTEEHHHHHTTSCCCHHHHHHHHHHHHHH
T ss_pred             EEEecccccHHHHHHHHHHHHHHHhCCCCCEeEEEEEEecCCeEEEEEEeCCCCcHHHHHhcCCCCHHHHHHHHHHHHHH
Confidence            46665555455678899999999999999999999999999999999999999999999976543   467899999999


Q ss_pred             hchhhcCCCCCceeccCCCCCeeecCCCCeEEeeccCceecCCCCcceeecccccCCCccCcccccccCCCcchhhHHHH
Q 044022           78 LAYLHFGFPRPIVLRNFKTQNILFNEENVAKWFDFLLSISIPEGETHITTDRVIGTRGYSAPEYISICVLNEKSNVFSFG  157 (241)
Q Consensus        78 l~~lh~~~~~~ivh~dl~~~nil~~~~~~~~l~df~~~~~~~~~~~~~~~~~~~~~~~~~aPE~~~~~~~~~~~Di~s~G  157 (241)
                      |.|||   +.+++|+||+|+||+++.++.++|+|||.+........  ......+++.|+|||.+.+..++.++||||||
T Consensus       132 l~~lH---~~~i~H~dl~p~Nil~~~~~~~kl~Dfg~~~~~~~~~~--~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG  206 (303)
T 3a7i_A          132 LDYLH---SEKKIHRDIKAANVLLSEHGEVKLADFGVAGQLTDTQI--KRNTFVGTPFWMAPEVIKQSAYDSKADIWSLG  206 (303)
T ss_dssp             HHHHH---HTTEECCCCSGGGEEECTTSCEEECCCTTCEECBTTBC--CBCCCCSCGGGCCHHHHTTCCBCTHHHHHHHH
T ss_pred             HHHHH---HCCCccCCCChheEEECCCCCEEEeecccceecCcccc--ccCccCCCcCccCHHHHhcCCCCchhhhHHHH
Confidence            99999   89999999999999999999999999999977654322  12345688999999999988999999999999


Q ss_pred             HHHHHHHhcCcccccccccCCCcccchHHHHHHHhhhcccCCCCCCccccCCCchhHHHHHHHHHHHHHHhccCCCCCCC
Q 044022          158 AFLFELLAGRIHIWDLLKDTHDHGCFFNEYLKNYLEDKRFTGIPAPIIVQDIPCIEKEQQLHASAQLTLECVNNSPEDRP  237 (241)
Q Consensus       158 ~~~~~~~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~cl~~~p~~Rp  237 (241)
                      +++|+|++|..||....         ..+..... .....     +.+....        +..+.+++.+||+.||++||
T Consensus       207 ~il~~l~~g~~p~~~~~---------~~~~~~~~-~~~~~-----~~~~~~~--------~~~l~~li~~~l~~dp~~Rp  263 (303)
T 3a7i_A          207 ITAIELARGEPPHSELH---------PMKVLFLI-PKNNP-----PTLEGNY--------SKPLKEFVEACLNKEPSFRP  263 (303)
T ss_dssp             HHHHHHHHSSCTTTTSC---------HHHHHHHH-HHSCC-----CCCCSSC--------CHHHHHHHHHHCCSSGGGSC
T ss_pred             HHHHHHccCCCCCCCcC---------HHHHHHHh-hcCCC-----CCCcccc--------CHHHHHHHHHHcCCChhhCc
Confidence            99999999999995421         11111111 11111     1111222        25688999999999999999


Q ss_pred             CCCC
Q 044022          238 TMVD  241 (241)
Q Consensus       238 t~~e  241 (241)
                      |++|
T Consensus       264 s~~~  267 (303)
T 3a7i_A          264 TAKE  267 (303)
T ss_dssp             CHHH
T ss_pred             CHHH
Confidence            9853


No 92 
>3c1x_A Hepatocyte growth factor receptor; receptor tyrosine kinase, signal transduction, GRB2, SHC, ATP-binding, glycoprotein, membrane; HET: CKK; 2.17A {Homo sapiens} SCOP: d.144.1.7
Probab=100.00  E-value=2e-40  Score=274.83  Aligned_cols=214  Identities=20%  Similarity=0.259  Sum_probs=154.4

Q ss_pred             cccccccccccHHHHHHHHHHHHhcCCCcccceeeeeee-CCcceEEEEecCCCCHHHhhcCCCc-----hHHHHHHHHH
Q 044022            2 KFYGHEYHRHTYGSCINNITYAAQMSHNHILKRIGCCLQ-TPIPILVFQSVEYGTLRDCIFGAPL-----PRLKIASDIV   75 (241)
Q Consensus         2 K~~~~~~~~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~~-~~~~~lv~e~~~~~sL~~~l~~~~~-----~~~~~~~~i~   75 (241)
                      |.+.........++|.+|+.++++++||||+++++++.. .+..++||||+++|+|.+++.....     ....++.|++
T Consensus       123 K~~~~~~~~~~~~~~~~E~~il~~l~hpnIv~~~~~~~~~~~~~~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~i~~qi~  202 (373)
T 3c1x_A          123 KSLNRITDIGEVSQFLTEGIIMKDFSHPNVLSLLGICLRSEGSPLVVLPYMKHGDLRNFIRNETHNPTVKDLIGFGLQVA  202 (373)
T ss_dssp             EECCSCSCSHHHHHHHHHHTTSTTCCCTTBCCCCEEECCCSSCCEEEEECCTTCBHHHHHHCTTCCCBHHHHHHHHHHHH
T ss_pred             EEcCCCCCHHHHHHHHHHHHHHHhCCCCCcceEEEEEEcCCCCeEEEEECCCCCCHHHHHhhcccCCCHHHHHHHHHHHH
Confidence            444443444557789999999999999999999998754 5578999999999999999976432     4678899999


Q ss_pred             HHhchhhcCCCCCceeccCCCCCeeecCCCCeEEeeccCceecCCCCcc--eeecccccCCCccCcccccccCCCcchhh
Q 044022           76 NSLAYLHFGFPRPIVLRNFKTQNILFNEENVAKWFDFLLSISIPEGETH--ITTDRVIGTRGYSAPEYISICVLNEKSNV  153 (241)
Q Consensus        76 ~~l~~lh~~~~~~ivh~dl~~~nil~~~~~~~~l~df~~~~~~~~~~~~--~~~~~~~~~~~~~aPE~~~~~~~~~~~Di  153 (241)
                      .||.|||   +.+++||||||+|||++.++.+||+|||++.........  .......+++.|+|||++.+..++.++||
T Consensus       203 ~aL~~LH---~~~ivHrDlkp~NIll~~~~~~kL~DFG~a~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Dv  279 (373)
T 3c1x_A          203 KGMKFLA---SKKFVHRDLAARNCMLDEKFTVKVADFGLARDMYDKEFDSVHNKTGAKLPVKWMALESLQTQKFTTKSDV  279 (373)
T ss_dssp             HHHHHHH---HTTCCCSCCCGGGEEECTTCCEEECCC---------------------CCGGGSCHHHHHHCCCCHHHHH
T ss_pred             HHHHHHH---HCCEecCccchheEEECCCCCEEEeeccccccccccccccccccCCCCCcccccChHHhcCCCCCcHHHH
Confidence            9999999   899999999999999999999999999999765432211  11123356778999999998899999999


Q ss_pred             HHHHHHHHHHHh-cCcccccccccCCCcccchHHHHHHHhhhcccCCCCCCccccCCCchhHHHHHHHHHHHHHHhccCC
Q 044022          154 FSFGAFLFELLA-GRIHIWDLLKDTHDHGCFFNEYLKNYLEDKRFTGIPAPIIVQDIPCIEKEQQLHASAQLTLECVNNS  232 (241)
Q Consensus       154 ~s~G~~~~~~~~-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~cl~~~  232 (241)
                      ||||+++|+|++ |.+||.......      .   .... ..+....     ...        ..+..+.+++.+||+.|
T Consensus       280 wSlG~il~ellt~~~~p~~~~~~~~------~---~~~~-~~~~~~~-----~p~--------~~~~~l~~li~~cl~~d  336 (373)
T 3c1x_A          280 WSFGVLLWELMTRGAPPYPDVNTFD------I---TVYL-LQGRRLL-----QPE--------YCPDPLYEVMLKCWHPK  336 (373)
T ss_dssp             HHHHHHHHHHHTTSCCSCTTSCSSC------H---HHHH-HTTCCCC-----CCT--------TCCHHHHHHHHHHTCSS
T ss_pred             HHHHHHHHHHHhCcCCCCCCCCHHH------H---HHHH-HcCCCCC-----CCC--------CCCHHHHHHHHHHcCCC
Confidence            999999999999 677775422111      1   1111 1111111     111        12257889999999999


Q ss_pred             CCCCCCCCC
Q 044022          233 PEDRPTMVD  241 (241)
Q Consensus       233 p~~Rpt~~e  241 (241)
                      |++|||++|
T Consensus       337 p~~RPs~~e  345 (373)
T 3c1x_A          337 AEMRPSFSE  345 (373)
T ss_dssp             GGGSCCHHH
T ss_pred             hhhCcCHHH
Confidence            999999753


No 93 
>1mqb_A Ephrin type-A receptor 2; tyrosine protein kinase, transferase; HET: ANP; 2.30A {Homo sapiens} SCOP: d.144.1.7
Probab=100.00  E-value=1.1e-39  Score=266.59  Aligned_cols=213  Identities=23%  Similarity=0.300  Sum_probs=159.7

Q ss_pred             cccccccccccHHHHHHHHHHHHhcCCCcccceeeeeeeCCcceEEEEecCCCCHHHhhcCCC-----chHHHHHHHHHH
Q 044022            2 KFYGHEYHRHTYGSCINNITYAAQMSHNHILKRIGCCLQTPIPILVFQSVEYGTLRDCIFGAP-----LPRLKIASDIVN   76 (241)
Q Consensus         2 K~~~~~~~~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~~~~~~~lv~e~~~~~sL~~~l~~~~-----~~~~~~~~~i~~   76 (241)
                      |.+...........+.+|++++++++||||+++++++...+..++||||+++++|.+++....     ..++.++.+++.
T Consensus        79 K~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~i~~qi~~  158 (333)
T 1mqb_A           79 KTLKAGYTEKQRVDFLGEAGIMGQFSHHNIIRLEGVISKYKPMMIITEYMENGALDKFLREKDGEFSVLQLVGMLRGIAA  158 (333)
T ss_dssp             EEECTTCCHHHHHHHHHHHHHHHTCCCTTBCCEEEEECSSSSEEEEEECCTTEEHHHHHHHTTTCSCHHHHHHHHHHHHH
T ss_pred             EEcCCCCCHHHHHHHHHHHHHHHhCCCCCCCcEEEEEecCCCcEEEEeCCCCCcHHHHHHhCCCCCCHHHHHHHHHHHHH
Confidence            455444444456679999999999999999999999999999999999999999999986532     146789999999


Q ss_pred             HhchhhcCCCCCceeccCCCCCeeecCCCCeEEeeccCceecCCCCcc-eeecccccCCCccCcccccccCCCcchhhHH
Q 044022           77 SLAYLHFGFPRPIVLRNFKTQNILFNEENVAKWFDFLLSISIPEGETH-ITTDRVIGTRGYSAPEYISICVLNEKSNVFS  155 (241)
Q Consensus        77 ~l~~lh~~~~~~ivh~dl~~~nil~~~~~~~~l~df~~~~~~~~~~~~-~~~~~~~~~~~~~aPE~~~~~~~~~~~Di~s  155 (241)
                      ||.|||   +.+++||||||+||+++.++.+||+|||.+......... .......++..|+|||.+.+..++.++||||
T Consensus       159 aL~~LH---~~~ivH~Dikp~NIl~~~~~~~kl~Dfg~~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~s  235 (333)
T 1mqb_A          159 GMKYLA---NMNYVHRDLAARNILVNSNLVCKVSDFGLSRVLEDDPEATYTTSGGKIPIRWTAPEAISYRKFTSASDVWS  235 (333)
T ss_dssp             HHHHHH---HTTCCCSCCCGGGEEECTTCCEEECCCCC-----------------CCCGGGSCHHHHHSCCCCHHHHHHH
T ss_pred             HHHHHH---hCCeeCCCCChheEEECCCCcEEECCCCcchhhccccccccccCCCCccccccCchhcccCCCCchhhhHH
Confidence            999999   899999999999999999999999999998765433211 1112234577899999999889999999999


Q ss_pred             HHHHHHHHHh-cCcccccccccCCCcccchHHHHHHHhhhcccCCCCCCccccCCCchhHHHHHHHHHHHHHHhccCCCC
Q 044022          156 FGAFLFELLA-GRIHIWDLLKDTHDHGCFFNEYLKNYLEDKRFTGIPAPIIVQDIPCIEKEQQLHASAQLTLECVNNSPE  234 (241)
Q Consensus       156 ~G~~~~~~~~-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~cl~~~p~  234 (241)
                      ||+++|++++ |..||....         ..+....... +.....     ..        ..+..+.+++.+||+.||+
T Consensus       236 lG~il~ellt~g~~pf~~~~---------~~~~~~~~~~-~~~~~~-----~~--------~~~~~l~~li~~~l~~~p~  292 (333)
T 1mqb_A          236 FGIVMWEVMTYGERPYWELS---------NHEVMKAIND-GFRLPT-----PM--------DCPSAIYQLMMQCWQQERA  292 (333)
T ss_dssp             HHHHHHHHHTTSCCTTTTCC---------HHHHHHHHHT-TCCCCC-----CT--------TCBHHHHHHHHHHTCSSTT
T ss_pred             HHHHHHHHHcCCCCCcccCC---------HHHHHHHHHC-CCcCCC-----cc--------cCCHHHHHHHHHHcCCChh
Confidence            9999999998 999995421         1122222211 111110     11        1225789999999999999


Q ss_pred             CCCCCC
Q 044022          235 DRPTMV  240 (241)
Q Consensus       235 ~Rpt~~  240 (241)
                      +|||+.
T Consensus       293 ~Rps~~  298 (333)
T 1mqb_A          293 RRPKFA  298 (333)
T ss_dssp             TSCCHH
T ss_pred             hCcCHH
Confidence            999975


No 94 
>3dtc_A Mitogen-activated protein kinase kinase kinase 9; mixed-lineage kinase, MLK family, MLK1 and MLK3 subtype selective inhibitors; HET: VIN; 2.60A {Homo sapiens} SCOP: d.144.1.0
Probab=100.00  E-value=8.2e-40  Score=259.72  Aligned_cols=202  Identities=25%  Similarity=0.371  Sum_probs=153.1

Q ss_pred             ccHHHHHHHHHHHHhcCCCcccceeeeeeeCCcceEEEEecCCCCHHHhhcCCCc---hHHHHHHHHHHHhchhhcCCCC
Q 044022           11 HTYGSCINNITYAAQMSHNHILKRIGCCLQTPIPILVFQSVEYGTLRDCIFGAPL---PRLKIASDIVNSLAYLHFGFPR   87 (241)
Q Consensus        11 ~~~~~~~~e~~~l~~l~h~~iv~~~~~~~~~~~~~lv~e~~~~~sL~~~l~~~~~---~~~~~~~~i~~~l~~lh~~~~~   87 (241)
                      ...+.+.+|++++++++||||+++++++...+..++||||+++++|.+++.....   ....++.+++.||.|||   +.
T Consensus        48 ~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~~~~~~L~~~~~~~~~~~~~~~~i~~~l~~~l~~lH---~~  124 (271)
T 3dtc_A           48 QTIENVRQEAKLFAMLKHPNIIALRGVCLKEPNLCLVMEFARGGPLNRVLSGKRIPPDILVNWAVQIARGMNYLH---DE  124 (271)
T ss_dssp             -CHHHHHHHHHHHHHCCCTTBCCEEEEECCC--CEEEEECCTTEEHHHHHTSSCCCHHHHHHHHHHHHHHHHHHH---HS
T ss_pred             HHHHHHHHHHHHHHhcCCCCEeeEEEEEecCCceEEEEEcCCCCCHHHHhhcCCCCHHHHHHHHHHHHHHHHHHH---hC
Confidence            4467899999999999999999999999999999999999999999999876543   46789999999999999   77


Q ss_pred             C---ceeccCCCCCeeecC--------CCCeEEeeccCceecCCCCcceeecccccCCCccCcccccccCCCcchhhHHH
Q 044022           88 P---IVLRNFKTQNILFNE--------ENVAKWFDFLLSISIPEGETHITTDRVIGTRGYSAPEYISICVLNEKSNVFSF  156 (241)
Q Consensus        88 ~---ivh~dl~~~nil~~~--------~~~~~l~df~~~~~~~~~~~~~~~~~~~~~~~~~aPE~~~~~~~~~~~Di~s~  156 (241)
                      +   ++||||||+||+++.        ++.++|+|||.+........    ....+++.|+|||.+.+..++.++|||||
T Consensus       125 ~~~~i~H~dikp~Nil~~~~~~~~~~~~~~~kl~Dfg~~~~~~~~~~----~~~~~~~~y~aPE~~~~~~~~~~~Di~sl  200 (271)
T 3dtc_A          125 AIVPIIHRDLKSSNILILQKVENGDLSNKILKITDFGLAREWHRTTK----MSAAGAYAWMAPEVIRASMFSKGSDVWSY  200 (271)
T ss_dssp             SSSCCCCSCCSGGGEEESSCCSSSCCSSCCEEECCCCC-----------------CCGGGSCHHHHHHCCCSHHHHHHHH
T ss_pred             CCCceeecCCchHHEEEecccccccccCcceEEccCCcccccccccc----cCCCCccceeCHHHhccCCCCchhhHHHH
Confidence            7   899999999999986        67899999999976544322    23468899999999998889999999999


Q ss_pred             HHHHHHHHhcCcccccccccCCCcccchHHHHHHHhhhcccCCCCCCccccCCCchhHHHHHHHHHHHHHHhccCCCCCC
Q 044022          157 GAFLFELLAGRIHIWDLLKDTHDHGCFFNEYLKNYLEDKRFTGIPAPIIVQDIPCIEKEQQLHASAQLTLECVNNSPEDR  236 (241)
Q Consensus       157 G~~~~~~~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~cl~~~p~~R  236 (241)
                      |+++|+|++|+.||....         ...............     ....        ..++.+.+++.+||+.||++|
T Consensus       201 G~~l~~l~~g~~p~~~~~---------~~~~~~~~~~~~~~~-----~~~~--------~~~~~~~~li~~~l~~~p~~R  258 (271)
T 3dtc_A          201 GVLLWELLTGEVPFRGID---------GLAVAYGVAMNKLAL-----PIPS--------TCPEPFAKLMEDCWNPDPHSR  258 (271)
T ss_dssp             HHHHHHHHHCCCTTTTSC---------HHHHHHHHHTSCCCC-----CCCT--------TCCHHHHHHHHHHTCSSGGGS
T ss_pred             HHHHHHHHhCCCCCCCCC---------HHHHHHhhhcCCCCC-----CCCc--------ccCHHHHHHHHHHhcCCcccC
Confidence            999999999999996521         111111111111111     1111        122578999999999999999


Q ss_pred             CCCCC
Q 044022          237 PTMVD  241 (241)
Q Consensus       237 pt~~e  241 (241)
                      ||++|
T Consensus       259 ps~~e  263 (271)
T 3dtc_A          259 PSFTN  263 (271)
T ss_dssp             CCHHH
T ss_pred             cCHHH
Confidence            99853


No 95 
>1u59_A Tyrosine-protein kinase ZAP-70; transferase; HET: STU; 2.30A {Homo sapiens} SCOP: d.144.1.7
Probab=100.00  E-value=5e-40  Score=263.28  Aligned_cols=214  Identities=20%  Similarity=0.278  Sum_probs=166.3

Q ss_pred             CcccccccccccHHHHHHHHHHHHhcCCCcccceeeeeeeCCcceEEEEecCCCCHHHhhcCCC-----chHHHHHHHHH
Q 044022            1 MKFYGHEYHRHTYGSCINNITYAAQMSHNHILKRIGCCLQTPIPILVFQSVEYGTLRDCIFGAP-----LPRLKIASDIV   75 (241)
Q Consensus         1 iK~~~~~~~~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~~~~~~~lv~e~~~~~sL~~~l~~~~-----~~~~~~~~~i~   75 (241)
                      ||++.........+++.+|++++++++||||+++++++ ..+..++||||+++++|.+++....     .....++.+++
T Consensus        42 vK~~~~~~~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~-~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~qi~  120 (287)
T 1u59_A           42 IKVLKQGTEKADTEEMMREAQIMHQLDNPYIVRLIGVC-QAEALMLVMEMAGGGPLHKFLVGKREEIPVSNVAELLHQVS  120 (287)
T ss_dssp             EEEECSSCCHHHHHHHHHHHHHHHHCCCTTBCCEEEEE-ESSSEEEEEECCTTEEHHHHHTTCTTTSCHHHHHHHHHHHH
T ss_pred             EEecCCccchhHHHHHHHHHHHHHhCCCCCEeEEEEEe-cCCCcEEEEEeCCCCCHHHHHHhCCccCCHHHHHHHHHHHH
Confidence            35555444445677899999999999999999999999 5667899999999999999986432     14678999999


Q ss_pred             HHhchhhcCCCCCceeccCCCCCeeecCCCCeEEeeccCceecCCCCcc-eeecccccCCCccCcccccccCCCcchhhH
Q 044022           76 NSLAYLHFGFPRPIVLRNFKTQNILFNEENVAKWFDFLLSISIPEGETH-ITTDRVIGTRGYSAPEYISICVLNEKSNVF  154 (241)
Q Consensus        76 ~~l~~lh~~~~~~ivh~dl~~~nil~~~~~~~~l~df~~~~~~~~~~~~-~~~~~~~~~~~~~aPE~~~~~~~~~~~Di~  154 (241)
                      .||.|||   +.+++|+||||+||+++.++.++|+|||.+......... .......+++.|+|||.+.+..++.++|||
T Consensus       121 ~~l~~lH---~~~i~H~dlkp~Nili~~~~~~kl~Dfg~~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~  197 (287)
T 1u59_A          121 MGMKYLE---EKNFVHRDLAARNVLLVNRHYAKISDFGLSKALGADDSYYTARSAGKWPLKWYAPECINFRKFSSRSDVW  197 (287)
T ss_dssp             HHHHHHH---HTTEECCCCSGGGEEEEETTEEEECCCTTCEECTTCSCEECCCCSSCCCGGGCCHHHHHHCEECHHHHHH
T ss_pred             HHHHHHH---HCCEeeCCCchheEEEcCCCCEEECcccceeeeccCcceeeccccccccccccCHHHhccCCCCchhhHH
Confidence            9999999   899999999999999999999999999999876543322 112233467889999999888899999999


Q ss_pred             HHHHHHHHHHh-cCcccccccccCCCcccchHHHHHHHhhhcccCCCCCCccccCCCchhHHHHHHHHHHHHHHhccCCC
Q 044022          155 SFGAFLFELLA-GRIHIWDLLKDTHDHGCFFNEYLKNYLEDKRFTGIPAPIIVQDIPCIEKEQQLHASAQLTLECVNNSP  233 (241)
Q Consensus       155 s~G~~~~~~~~-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~cl~~~p  233 (241)
                      |||+++|+|++ |+.||.....         .+...... .+....     ....        .+..+.+++.+||+.||
T Consensus       198 slG~il~ellt~g~~p~~~~~~---------~~~~~~i~-~~~~~~-----~~~~--------~~~~l~~li~~~l~~~p  254 (287)
T 1u59_A          198 SYGVTMWEALSYGQKPYKKMKG---------PEVMAFIE-QGKRME-----CPPE--------CPPELYALMSDCWIYKW  254 (287)
T ss_dssp             HHHHHHHHHHTTSCCTTTTCCT---------HHHHHHHH-TTCCCC-----CCTT--------CCHHHHHHHHHTTCSSG
T ss_pred             HHHHHHHHHHcCCCCCcccCCH---------HHHHHHHh-cCCcCC-----CCCC--------cCHHHHHHHHHHcCCCh
Confidence            99999999998 9999965211         12222221 111111     1112        22678999999999999


Q ss_pred             CCCCCCCC
Q 044022          234 EDRPTMVD  241 (241)
Q Consensus       234 ~~Rpt~~e  241 (241)
                      ++|||+.|
T Consensus       255 ~~Rps~~~  262 (287)
T 1u59_A          255 EDRPDFLT  262 (287)
T ss_dssp             GGSCCHHH
T ss_pred             hhCcCHHH
Confidence            99999753


No 96 
>3kk8_A Calcium/calmodulin dependent protein kinase II; ATP-binding, nucleotide-binding, serine/threonine-protein kinase, transferase; HET: TPO; 1.72A {Caenorhabditis elegans} PDB: 3kk9_A* 3kl8_A 2vn9_A* 3bhh_A*
Probab=100.00  E-value=1.6e-39  Score=259.73  Aligned_cols=205  Identities=22%  Similarity=0.338  Sum_probs=161.3

Q ss_pred             ccHHHHHHHHHHHHhcCCCcccceeeeeeeCCcceEEEEecCCCCHHHhhcCCC----chHHHHHHHHHHHhchhhcCCC
Q 044022           11 HTYGSCINNITYAAQMSHNHILKRIGCCLQTPIPILVFQSVEYGTLRDCIFGAP----LPRLKIASDIVNSLAYLHFGFP   86 (241)
Q Consensus        11 ~~~~~~~~e~~~l~~l~h~~iv~~~~~~~~~~~~~lv~e~~~~~sL~~~l~~~~----~~~~~~~~~i~~~l~~lh~~~~   86 (241)
                      ...+.+.+|++++++++||||+++++++...+..++||||+++++|.+.+....    .....++.+++.||.|||   +
T Consensus        47 ~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~~v~e~~~~~~l~~~~~~~~~~~~~~~~~~~~~i~~~l~~lH---~  123 (284)
T 3kk8_A           47 RDFQKLEREARICRKLQHPNIVRLHDSIQEESFHYLVFDLVTGGELFEDIVAREFYSEADASHCIQQILESIAYCH---S  123 (284)
T ss_dssp             HHHHHHHHHHHHHHHCCCTTBCCEEEEEECSSEEEEEECCCCSCBHHHHHHHHSSCCHHHHHHHHHHHHHHHHHHH---H
T ss_pred             HHHHHHHHHHHHHHHcCCCCcCeEEEEEEcCCEEEEEEecCCCCCHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHH---H
Confidence            445778899999999999999999999999999999999999999988875432    246789999999999999   8


Q ss_pred             CCceeccCCCCCeeecCCCC---eEEeeccCceecCCCCcceeecccccCCCccCcccccccCCCcchhhHHHHHHHHHH
Q 044022           87 RPIVLRNFKTQNILFNEENV---AKWFDFLLSISIPEGETHITTDRVIGTRGYSAPEYISICVLNEKSNVFSFGAFLFEL  163 (241)
Q Consensus        87 ~~ivh~dl~~~nil~~~~~~---~~l~df~~~~~~~~~~~~~~~~~~~~~~~~~aPE~~~~~~~~~~~Di~s~G~~~~~~  163 (241)
                      .+++||||||+||+++.++.   ++|+|||.+.........   ....+++.|+|||.+.+..++.++||||||+++|+|
T Consensus       124 ~~i~H~dikp~Nil~~~~~~~~~~kl~Dfg~~~~~~~~~~~---~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~~l~~l  200 (284)
T 3kk8_A          124 NGIVHRNLKPENLLLASKAKGAAVKLADFGLAIEVNDSEAW---HGFAGTPGYLSPEVLKKDPYSKPVDIWACGVILYIL  200 (284)
T ss_dssp             TTEECSCCCGGGEEESSSSTTCCEEECCCTTCEECCSSCBC---CCSCSCGGGCCHHHHTTCCBCTHHHHHHHHHHHHHH
T ss_pred             CCcCcCCCCHHHEEEecCCCCCcEEEeeceeeEEcccCccc---cCCCCCcCCcCchhhcCCCCCcccchHHHHHHHHHH
Confidence            99999999999999976655   999999999776543321   234689999999999998999999999999999999


Q ss_pred             HhcCcccccccccCCCcccchHHHHHHHhhhcccCCCCCCccccCCCchhHHHHHHHHHHHHHHhccCCCCCCCCCCC
Q 044022          164 LAGRIHIWDLLKDTHDHGCFFNEYLKNYLEDKRFTGIPAPIIVQDIPCIEKEQQLHASAQLTLECVNNSPEDRPTMVD  241 (241)
Q Consensus       164 ~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~cl~~~p~~Rpt~~e  241 (241)
                      ++|..||....         ..+...... .+.. ..+.+.. .        ..++.+.+++.+||+.||++|||++|
T Consensus       201 ~~g~~pf~~~~---------~~~~~~~~~-~~~~-~~~~~~~-~--------~~~~~~~~li~~~l~~dp~~Rps~~~  258 (284)
T 3kk8_A          201 LVGYPPFWDED---------QHRLYAQIK-AGAY-DYPSPEW-D--------TVTPEAKSLIDSMLTVNPKKRITADQ  258 (284)
T ss_dssp             HHSSCSSCCSS---------HHHHHHHHH-HTCC-CCCTTTT-T--------TSCHHHHHHHHHHSCSSTTTSCCHHH
T ss_pred             HHCCCCCCCCc---------hhHHHHHHH-hccc-cCCchhh-c--------ccCHHHHHHHHHHcccChhhCCCHHH
Confidence            99999995521         111122211 1111 1111110 1        12257889999999999999999853


No 97 
>3uc3_A Serine/threonine-protein kinase SRK2I; SNRK2, ABA signaling, transferase; 1.90A {Arabidopsis thaliana} PDB: 3zut_A 3zuu_A 3uc4_A 3ujg_A 3udb_A
Probab=100.00  E-value=7.1e-40  Score=270.57  Aligned_cols=206  Identities=20%  Similarity=0.234  Sum_probs=151.4

Q ss_pred             cHHHHHHHHHHHHhcCCCcccceeeeeeeCCcceEEEEecCCCCHHHhhcCCC----chHHHHHHHHHHHhchhhcCCCC
Q 044022           12 TYGSCINNITYAAQMSHNHILKRIGCCLQTPIPILVFQSVEYGTLRDCIFGAP----LPRLKIASDIVNSLAYLHFGFPR   87 (241)
Q Consensus        12 ~~~~~~~e~~~l~~l~h~~iv~~~~~~~~~~~~~lv~e~~~~~sL~~~l~~~~----~~~~~~~~~i~~~l~~lh~~~~~   87 (241)
                      ..+.+.+|+.++++++||||+++++++...+..++||||+++|+|.+++....    .....++.|++.||.|||   ++
T Consensus        59 ~~~~~~~E~~~l~~l~hpniv~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~i~~ql~~~L~~LH---~~  135 (361)
T 3uc3_A           59 IDENVQREIINHRSLRHPNIVRFKEVILTPTHLAIIMEYASGGELYERICNAGRFSEDEARFFFQQLLSGVSYCH---SM  135 (361)
T ss_dssp             SCHHHHHHHHHHHHCCCTTBCCEEEEEECSSEEEEEEECCCSCBHHHHHHHHSSCCHHHHHHHHHHHHHHHHHHH---HT
T ss_pred             ccHHHHHHHHHHHhCCCCCCCcEEEEEeeCCEEEEEEEeCCCCCHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHH---HC
Confidence            34678899999999999999999999999999999999999999999885432    256789999999999999   89


Q ss_pred             CceeccCCCCCeeecCCCC--eEEeeccCceecCCCCcceeecccccCCCccCcccccccCCCcc-hhhHHHHHHHHHHH
Q 044022           88 PIVLRNFKTQNILFNEENV--AKWFDFLLSISIPEGETHITTDRVIGTRGYSAPEYISICVLNEK-SNVFSFGAFLFELL  164 (241)
Q Consensus        88 ~ivh~dl~~~nil~~~~~~--~~l~df~~~~~~~~~~~~~~~~~~~~~~~~~aPE~~~~~~~~~~-~Di~s~G~~~~~~~  164 (241)
                      +++||||||+||+++.++.  +||+|||++........   .....||+.|+|||++.+..++.+ +||||||+++|+|+
T Consensus       136 ~ivH~Dlkp~Nill~~~~~~~~kl~Dfg~a~~~~~~~~---~~~~~gt~~y~aPE~~~~~~~~~~~~DiwslG~il~ell  212 (361)
T 3uc3_A          136 QICHRDLKLENTLLDGSPAPRLKICDFGYSKSSVLHSQ---PKSTVGTPAYIAPEVLLRQEYDGKIADVWSCGVTLYVML  212 (361)
T ss_dssp             TCCSCCCCGGGEEECSSSSCCEEECCCCCC------------------CTTSCHHHHHCSSCCHHHHHHHHHHHHHHHHH
T ss_pred             CcccCCCCHHHEEEcCCCCceEEEeecCccccccccCC---CCCCcCCCCcCChhhhcCCCCCCCeeeeehhHHHHHHHH
Confidence            9999999999999987765  99999999874332221   233468999999999988777655 89999999999999


Q ss_pred             hcCcccccccccCCCcccchHHHHHHHhhhcccCCCCCCccccCCCchhHHHHHHHHHHHHHHhccCCCCCCCCCCC
Q 044022          165 AGRIHIWDLLKDTHDHGCFFNEYLKNYLEDKRFTGIPAPIIVQDIPCIEKEQQLHASAQLTLECVNNSPEDRPTMVD  241 (241)
Q Consensus       165 ~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~cl~~~p~~Rpt~~e  241 (241)
                      +|+.||......     ...............  ..+..   .        ..+..+.+|+.+||+.||++|||++|
T Consensus       213 ~g~~Pf~~~~~~-----~~~~~~~~~~~~~~~--~~~~~---~--------~~s~~~~~li~~~L~~dP~~Rps~~e  271 (361)
T 3uc3_A          213 VGAYPFEDPEEP-----RDYRKTIQRILSVKY--SIPDD---I--------RISPECCHLISRIFVADPATRISIPE  271 (361)
T ss_dssp             HSSCSCC----C-----CCHHHHHHHHHTTCC--CCCTT---S--------CCCHHHHHHHHHHSCSCTTTSCCHHH
T ss_pred             hCCCCCCCCccH-----HHHHHHHHHHhcCCC--CCCCc---C--------CCCHHHHHHHHHHccCChhHCcCHHH
Confidence            999999652211     112222222211110  11110   0        11257889999999999999999853


No 98 
>3o0g_A Cell division protein kinase 5; kinase activator complex, kinase inhibitor complex, transferase-transferase activator complex; HET: 3O0; 1.95A {Homo sapiens} SCOP: d.144.1.7 PDB: 1unh_A* 1ung_A* 1unl_A* 1h4l_A
Probab=100.00  E-value=3.1e-39  Score=259.25  Aligned_cols=166  Identities=17%  Similarity=0.200  Sum_probs=136.0

Q ss_pred             Cccccccc-ccccHHHHHHHHHHHHhcCCCcccceeeeeeeCCcceEEEEecCCCCHHHhhcC-CC----chHHHHHHHH
Q 044022            1 MKFYGHEY-HRHTYGSCINNITYAAQMSHNHILKRIGCCLQTPIPILVFQSVEYGTLRDCIFG-AP----LPRLKIASDI   74 (241)
Q Consensus         1 iK~~~~~~-~~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~~~~~~~lv~e~~~~~sL~~~l~~-~~----~~~~~~~~~i   74 (241)
                      ||++.... .......+.+|++++++++||||+++++++..++..++||||+.+ +|.+.+.. ..    .....++.|+
T Consensus        32 vK~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~lv~e~~~~-~l~~~~~~~~~~l~~~~~~~~~~ql  110 (292)
T 3o0g_A           32 LKRVRLDDDDEGVPSSALREICLLKELKHKNIVRLHDVLHSDKKLTLVFEFCDQ-DLKKYFDSCNGDLDPEIVKSFLFQL  110 (292)
T ss_dssp             EEEEESSCSSTTHHHHHHHHHHHHTTCCCTTBCCEEEEEEETTEEEEEEECCSE-EHHHHHHHTTTCCCHHHHHHHHHHH
T ss_pred             EEeeeccCCcCCcchHHHHHHHHHhcCCCCCEeeEEeEEEeCCEEEEEEecCCC-CHHHHHHhCCCCCCHHHHHHHHHHH
Confidence            35554333 223457789999999999999999999999999999999999975 66555433 21    2467899999


Q ss_pred             HHHhchhhcCCCCCceeccCCCCCeeecCCCCeEEeeccCceecCCCCcceeecccccCCCccCcccccccC-CCcchhh
Q 044022           75 VNSLAYLHFGFPRPIVLRNFKTQNILFNEENVAKWFDFLLSISIPEGETHITTDRVIGTRGYSAPEYISICV-LNEKSNV  153 (241)
Q Consensus        75 ~~~l~~lh~~~~~~ivh~dl~~~nil~~~~~~~~l~df~~~~~~~~~~~~~~~~~~~~~~~~~aPE~~~~~~-~~~~~Di  153 (241)
                      +.||.|||   +.+++||||||+||+++.++.+||+|||.+.........  .....+|+.|+|||++.+.. ++.++||
T Consensus       111 ~~~l~~lH---~~~ivH~dikp~Nil~~~~~~~kl~Dfg~~~~~~~~~~~--~~~~~~t~~y~aPE~~~~~~~~~~~~Di  185 (292)
T 3o0g_A          111 LKGLGFCH---SRNVLHRDLKPQNLLINRNGELKLANFGLARAFGIPVRC--YSAEVVTLWYRPPDVLFGAKLYSTSIDM  185 (292)
T ss_dssp             HHHHHHHH---HTTEECCCCSGGGEEECTTSCEEECCCTTCEECCSCCSC--CCSCCSCGGGCCHHHHTTCSCCCTHHHH
T ss_pred             HHHHHHHH---hCCeecCCCCHHHEEEcCCCCEEEeecccceecCCcccc--ccCCccccCCcChHHHcCCCCcCchHHH
Confidence            99999999   899999999999999999999999999999876533221  13346789999999998765 7999999


Q ss_pred             HHHHHHHHHHHhcCccccc
Q 044022          154 FSFGAFLFELLAGRIHIWD  172 (241)
Q Consensus       154 ~s~G~~~~~~~~g~~p~~~  172 (241)
                      ||||+++|+|++|..||..
T Consensus       186 wslG~il~~l~~~~~p~~~  204 (292)
T 3o0g_A          186 WSAGCIFAELANAGRPLFP  204 (292)
T ss_dssp             HHHHHHHHHHTTTSCCSCC
T ss_pred             HHHHHHHHHHHHcCCCCcC
Confidence            9999999999999888644


No 99 
>3q4u_A Activin receptor type-1; structural genomics consortium, SGC, protein kinase, transfe; HET: LDN FLC; 1.82A {Homo sapiens} PDB: 3mtf_A* 3oom_A* 4dym_A* 3h9r_A* 3my0_A*
Probab=100.00  E-value=2.3e-39  Score=260.74  Aligned_cols=218  Identities=23%  Similarity=0.330  Sum_probs=160.4

Q ss_pred             cHHHHHHHHHHHHh--cCCCcccceeeeeeeC----CcceEEEEecCCCCHHHhhcCCCc---hHHHHHHHHHHHhchhh
Q 044022           12 TYGSCINNITYAAQ--MSHNHILKRIGCCLQT----PIPILVFQSVEYGTLRDCIFGAPL---PRLKIASDIVNSLAYLH   82 (241)
Q Consensus        12 ~~~~~~~e~~~l~~--l~h~~iv~~~~~~~~~----~~~~lv~e~~~~~sL~~~l~~~~~---~~~~~~~~i~~~l~~lh   82 (241)
                      ....+.+|.+++..  ++||||+++++++...    ...++||||+++|+|.++++....   ....++.+++.||.|||
T Consensus        43 ~~~~~~~e~~~~~~~~l~h~niv~~~~~~~~~~~~~~~~~lv~e~~~~g~L~~~l~~~~~~~~~~~~i~~~i~~~l~~lH  122 (301)
T 3q4u_A           43 DEKSWFRETELYNTVMLRHENILGFIASDMTSRHSSTQLWLITHYHEMGSLYDYLQLTTLDTVSCLRIVLSIASGLAHLH  122 (301)
T ss_dssp             GHHHHHHHHHHHHHTCCCCTTBCCEEEEEEEEETTEEEEEEEECCCTTCBHHHHHTTCCBCHHHHHHHHHHHHHHHHHHH
T ss_pred             cchhhHHHHHHHHHhhccCcCeeeEEEeeccccCCCceeEEehhhccCCCHHHHHhhcccCHHHHHHHHHHHHHHHHHHH
Confidence            45667778887777  7999999999987653    458999999999999999976644   46789999999999999


Q ss_pred             cCC-----CCCceeccCCCCCeeecCCCCeEEeeccCceecCCCCcce--eecccccCCCccCccccccc------CCCc
Q 044022           83 FGF-----PRPIVLRNFKTQNILFNEENVAKWFDFLLSISIPEGETHI--TTDRVIGTRGYSAPEYISIC------VLNE  149 (241)
Q Consensus        83 ~~~-----~~~ivh~dl~~~nil~~~~~~~~l~df~~~~~~~~~~~~~--~~~~~~~~~~~~aPE~~~~~------~~~~  149 (241)
                      ...     +.+++||||||+|||++.++.+||+|||++..........  ......||+.|+|||++.+.      .++.
T Consensus       123 ~~~~~~~~~~~ivH~Dlkp~Nill~~~~~~kl~Dfg~a~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~  202 (301)
T 3q4u_A          123 IEIFGTQGKPAIAHRDLKSKNILVKKNGQCCIADLGLAVMHSQSTNQLDVGNNPRVGTKRYMAPEVLDETIQVDCFDSYK  202 (301)
T ss_dssp             SCBCSTTCBCEEECSCCCGGGEEECTTSCEEECCCTTCEEEETTTTEEECCCCCCCCCGGGCCHHHHTTCCCTTCHHHHH
T ss_pred             HhhhhccCCCCeecCCCChHhEEEcCCCCEEEeeCCCeeecccccccccccccccccccceeChhhhcCcCCCCcccCCc
Confidence            322     5689999999999999999999999999997654433221  12334789999999999876      4557


Q ss_pred             chhhHHHHHHHHHHHhc----------CcccccccccCCCcccchHHHHHHHhhhcccCCCCCCccccCCCchhHHHHHH
Q 044022          150 KSNVFSFGAFLFELLAG----------RIHIWDLLKDTHDHGCFFNEYLKNYLEDKRFTGIPAPIIVQDIPCIEKEQQLH  219 (241)
Q Consensus       150 ~~Di~s~G~~~~~~~~g----------~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  219 (241)
                      ++||||||+++|+|++|          ..||.......    ...................+.        .......+.
T Consensus       203 ~~DvwslG~il~el~tg~~~~~~~~~~~~pf~~~~~~~----~~~~~~~~~~~~~~~~~~~~~--------~~~~~~~~~  270 (301)
T 3q4u_A          203 RVDIWAFGLVLWEVARRMVSNGIVEDYKPPFYDVVPND----PSFEDMRKVVCVDQQRPNIPN--------RWFSDPTLT  270 (301)
T ss_dssp             HHHHHHHHHHHHHHHTTBCBTTBCCCCCCTTTTTSCSS----CCHHHHHHHHTTSCCCCCCCG--------GGGGSHHHH
T ss_pred             hhhHHHHHHHHHHHHhhhcCccccccccccccccCCCC----cchhhhhHHHhccCCCCCCCh--------hhccCccHH
Confidence            99999999999999999          77775432211    111222222111111111111        111235667


Q ss_pred             HHHHHHHHhccCCCCCCCCCCC
Q 044022          220 ASAQLTLECVNNSPEDRPTMVD  241 (241)
Q Consensus       220 ~~~~l~~~cl~~~p~~Rpt~~e  241 (241)
                      .+.+++.+||+.||++|||++|
T Consensus       271 ~l~~li~~cl~~dP~~Rps~~~  292 (301)
T 3q4u_A          271 SLAKLMKECWYQNPSARLTALR  292 (301)
T ss_dssp             HHHHHHHHHCCSSGGGSCCHHH
T ss_pred             HHHHHHHHHhhcChhhCCCHHH
Confidence            8999999999999999999853


No 100
>2i0e_A Protein kinase C-beta II; serine/threonine protein kinase, transferase; HET: TPO SEP PDS; 2.60A {Homo sapiens} PDB: 3iw4_A*
Probab=100.00  E-value=3.9e-39  Score=265.14  Aligned_cols=200  Identities=20%  Similarity=0.235  Sum_probs=161.6

Q ss_pred             ccHHHHHHHHHHHHhc-CCCcccceeeeeeeCCcceEEEEecCCCCHHHhhcCCC----chHHHHHHHHHHHhchhhcCC
Q 044022           11 HTYGSCINNITYAAQM-SHNHILKRIGCCLQTPIPILVFQSVEYGTLRDCIFGAP----LPRLKIASDIVNSLAYLHFGF   85 (241)
Q Consensus        11 ~~~~~~~~e~~~l~~l-~h~~iv~~~~~~~~~~~~~lv~e~~~~~sL~~~l~~~~----~~~~~~~~~i~~~l~~lh~~~   85 (241)
                      ...+.+.+|.+++..+ +||||+++++++...+..++||||+++|+|.+++....    .....++.+|+.||.|||   
T Consensus        62 ~~~~~~~~E~~~l~~~~~hp~iv~l~~~~~~~~~~~lv~E~~~gg~L~~~l~~~~~~~~~~~~~~~~qi~~aL~~LH---  138 (353)
T 2i0e_A           62 DDVECTMVEKRVLALPGKPPFLTQLHSCFQTMDRLYFVMEYVNGGDLMYHIQQVGRFKEPHAVFYAAEIAIGLFFLQ---  138 (353)
T ss_dssp             TCHHHHHHHHHHHTCTTCCTTBCCEEEEEECSSEEEEEEECCCSCBHHHHHHHHSSCCHHHHHHHHHHHHHHHHHHH---
T ss_pred             hHHHHHHHHHHHHHhcCCCCEEeeEEEEEEcCCEEEEEEeCCCCCcHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHH---
Confidence            4567788999999988 89999999999999999999999999999999986532    256789999999999999   


Q ss_pred             CCCceeccCCCCCeeecCCCCeEEeeccCceecCCCCcceeecccccCCCccCcccccccCCCcchhhHHHHHHHHHHHh
Q 044022           86 PRPIVLRNFKTQNILFNEENVAKWFDFLLSISIPEGETHITTDRVIGTRGYSAPEYISICVLNEKSNVFSFGAFLFELLA  165 (241)
Q Consensus        86 ~~~ivh~dl~~~nil~~~~~~~~l~df~~~~~~~~~~~~~~~~~~~~~~~~~aPE~~~~~~~~~~~Di~s~G~~~~~~~~  165 (241)
                      +.+|+||||||+|||++.++.+||+|||++........  ......||+.|+|||++.+..++.++|+||||+++|+|++
T Consensus       139 ~~givHrDlkp~NIll~~~g~vkL~DFG~a~~~~~~~~--~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~ell~  216 (353)
T 2i0e_A          139 SKGIIYRDLKLDNVMLDSEGHIKIADFGMCKENIWDGV--TTKTFCGTPDYIAPEIIAYQPYGKSVDWWAFGVLLYEMLA  216 (353)
T ss_dssp             HTTCBCCCCCGGGEEECTTSCEEECCCTTCBCCCCTTC--CBCCCCSCGGGCCHHHHTTCCBSTHHHHHHHHHHHHHHHH
T ss_pred             HCCEEeccCCHHHEEEcCCCcEEEEeCCcccccccCCc--ccccccCCccccChhhhcCCCcCCcccccchHHHHHHHHc
Confidence            89999999999999999999999999999975432221  1234578999999999998899999999999999999999


Q ss_pred             cCcccccccccCCCcccchHHHHHHHhhhcccCCCCCCccccCCCchhHHHHHHHHHHHHHHhccCCCCCCCCC
Q 044022          166 GRIHIWDLLKDTHDHGCFFNEYLKNYLEDKRFTGIPAPIIVQDIPCIEKEQQLHASAQLTLECVNNSPEDRPTM  239 (241)
Q Consensus       166 g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~cl~~~p~~Rpt~  239 (241)
                      |+.||...         ...+......... . .     ....        .+..+.+++.+||..||++||++
T Consensus       217 G~~Pf~~~---------~~~~~~~~i~~~~-~-~-----~p~~--------~s~~~~~li~~lL~~dP~~R~~~  266 (353)
T 2i0e_A          217 GQAPFEGE---------DEDELFQSIMEHN-V-A-----YPKS--------MSKEAVAICKGLMTKHPGKRLGC  266 (353)
T ss_dssp             SSCSSCCS---------SHHHHHHHHHHCC-C-C-----CCTT--------SCHHHHHHHHHHTCSCTTSCTTC
T ss_pred             CCCCCCCC---------CHHHHHHHHHhCC-C-C-----CCCC--------CCHHHHHHHHHHhhcCHHHcCCC
Confidence            99999642         1122222222211 1 1     1111        22578899999999999999976


No 101
>1qcf_A Haematopoetic cell kinase (HCK); tyrosine kinase-inhibitor complex, DOWN-regulated kinase, ordered activation loop; HET: PTR PP1; 2.00A {Homo sapiens} SCOP: b.34.2.1 d.93.1.1 d.144.1.7 PDB: 2c0i_A* 2c0o_A* 2c0t_A* 1ad5_A* 2hck_A* 3nhn_A 3hck_A 1bu1_A 3rea_B 3rbb_B
Probab=100.00  E-value=4.8e-40  Score=279.33  Aligned_cols=202  Identities=21%  Similarity=0.324  Sum_probs=159.9

Q ss_pred             ccHHHHHHHHHHHHhcCCCcccceeeeeeeCCcceEEEEecCCCCHHHhhcCCC------chHHHHHHHHHHHhchhhcC
Q 044022           11 HTYGSCINNITYAAQMSHNHILKRIGCCLQTPIPILVFQSVEYGTLRDCIFGAP------LPRLKIASDIVNSLAYLHFG   84 (241)
Q Consensus        11 ~~~~~~~~e~~~l~~l~h~~iv~~~~~~~~~~~~~lv~e~~~~~sL~~~l~~~~------~~~~~~~~~i~~~l~~lh~~   84 (241)
                      ...+.|.+|++++++++||||+++++++. .+..++||||+++|+|.+++....      ...+.++.|++.||.|||  
T Consensus       225 ~~~~~~~~E~~~l~~l~h~~iv~l~~~~~-~~~~~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~qi~~~l~~LH--  301 (454)
T 1qcf_A          225 MSVEAFLAEANVMKTLQHDKLVKLHAVVT-KEPIYIITEFMAKGSLLDFLKSDEGSKQPLPKLIDFSAQIAEGMAFIE--  301 (454)
T ss_dssp             BCHHHHHHHHHHHTTCCCTTBCCEEEEEC-SSSCEEEECCCTTCBHHHHHHSHHHHTCCHHHHHHHHHHHHHHHHHHH--
T ss_pred             ccHHHHHHHHHHHhhCCCCCEeeEEEEEe-CCccEEEEeecCCCcHHHHHHhccCCCCCHHHHHHHHHHHHHHHHHHH--
Confidence            35788999999999999999999999986 567899999999999999997531      146789999999999999  


Q ss_pred             CCCCceeccCCCCCeeecCCCCeEEeeccCceecCCCCcceeecccccCCCccCcccccccCCCcchhhHHHHHHHHHHH
Q 044022           85 FPRPIVLRNFKTQNILFNEENVAKWFDFLLSISIPEGETHITTDRVIGTRGYSAPEYISICVLNEKSNVFSFGAFLFELL  164 (241)
Q Consensus        85 ~~~~ivh~dl~~~nil~~~~~~~~l~df~~~~~~~~~~~~~~~~~~~~~~~~~aPE~~~~~~~~~~~Di~s~G~~~~~~~  164 (241)
                       +++++||||||+|||++.++.+||+|||++........ .......++..|+|||++....++.++||||||+++|+|+
T Consensus       302 -~~~ivHrDlkp~Nill~~~~~~kl~DFG~a~~~~~~~~-~~~~~~~~~~~y~aPE~~~~~~~~~~~DvwslG~~l~el~  379 (454)
T 1qcf_A          302 -QRNYIHRDLRAANILVSASLVCKIADFGLARVIEDNEY-TAREGAKFPIKWTAPEAINFGSFTIKSDVWSFGILLMEIV  379 (454)
T ss_dssp             -HTTCCCSSCSGGGEEECTTCCEEECSTTGGGGBCCHHH-HTTCSSSSCGGGSCHHHHHHCCCCHHHHHHHHHHHHHHHH
T ss_pred             -hCCccCCCCCHHHEEECCCCcEEEeeCCCceEcCCCce-eccCCCcccccccCHHHhccCCCCcHHHHHhHHHHHHHHH
Confidence             89999999999999999999999999999976543211 1112234577899999999889999999999999999999


Q ss_pred             h-cCcccccccccCCCcccchHHHHHHHhhhcccCCCCCCccccCCCchhHHHHHHHHHHHHHHhccCCCCCCCCCC
Q 044022          165 A-GRIHIWDLLKDTHDHGCFFNEYLKNYLEDKRFTGIPAPIIVQDIPCIEKEQQLHASAQLTLECVNNSPEDRPTMV  240 (241)
Q Consensus       165 ~-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~cl~~~p~~Rpt~~  240 (241)
                      + |+.||....         ..+...... .+.....+     .        ..++.+.+++.+||+.||++|||++
T Consensus       380 t~g~~P~~~~~---------~~~~~~~i~-~~~~~~~~-----~--------~~~~~l~~li~~cl~~dp~~RPt~~  433 (454)
T 1qcf_A          380 TYGRIPYPGMS---------NPEVIRALE-RGYRMPRP-----E--------NCPEELYNIMMRCWKNRPEERPTFE  433 (454)
T ss_dssp             TTSCCSSTTCC---------HHHHHHHHH-HTCCCCCC-----T--------TSCHHHHHHHHHHTCSSGGGSCCHH
T ss_pred             hCCCCCCCCCC---------HHHHHHHHH-cCCCCCCC-----C--------CCCHHHHHHHHHHccCChhHCcCHH
Confidence            9 999995421         122222222 12111111     1        2236789999999999999999975


No 102
>3is5_A Calcium-dependent protein kinase; CDPK, structural genomics, parasitology, structural genomics consortium, SGC, ATP-binding, nucleotide-binding; HET: ANP; 2.55A {Toxoplasma gondii}
Probab=100.00  E-value=3.2e-39  Score=258.44  Aligned_cols=213  Identities=21%  Similarity=0.289  Sum_probs=159.6

Q ss_pred             CcccccccccccHHHHHHHHHHHHhcCCCcccceeeeeeeCCcceEEEEecCCCCHHHhhcCC-----C---chHHHHHH
Q 044022            1 MKFYGHEYHRHTYGSCINNITYAAQMSHNHILKRIGCCLQTPIPILVFQSVEYGTLRDCIFGA-----P---LPRLKIAS   72 (241)
Q Consensus         1 iK~~~~~~~~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~~~~~~~lv~e~~~~~sL~~~l~~~-----~---~~~~~~~~   72 (241)
                      ||.+..+......+.+.+|++++++++||||+++++++...+..++||||+++++|.+++...     .   .....++.
T Consensus        52 iK~~~~~~~~~~~~~~~~E~~~l~~l~hp~iv~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~i~~  131 (285)
T 3is5_A           52 IKTINKDRSQVPMEQIEAEIEVLKSLDHPNIIKIFEVFEDYHNMYIVMETCEGGELLERIVSAQARGKALSEGYVAELMK  131 (285)
T ss_dssp             EEEEEGGGCCSCHHHHHHHHHHHHTCCCTTBCCEEEEEECSSEEEEEECCCSCCBHHHHHHHHHHHTCCCCHHHHHHHHH
T ss_pred             EEEeeccccchhHHHHHHHHHHHHhCCCchHHhHHHheecCCeEEEEEEeCCCCcHHHHHHhhhhcccCCCHHHHHHHHH
Confidence            355555555556788999999999999999999999999999999999999999999987432     1   14678999


Q ss_pred             HHHHHhchhhcCCCCCceeccCCCCCeee---cCCCCeEEeeccCceecCCCCcceeecccccCCCccCcccccccCCCc
Q 044022           73 DIVNSLAYLHFGFPRPIVLRNFKTQNILF---NEENVAKWFDFLLSISIPEGETHITTDRVIGTRGYSAPEYISICVLNE  149 (241)
Q Consensus        73 ~i~~~l~~lh~~~~~~ivh~dl~~~nil~---~~~~~~~l~df~~~~~~~~~~~~~~~~~~~~~~~~~aPE~~~~~~~~~  149 (241)
                      +++.||.|||   +.+++||||||+||++   +.++.++|+|||.+........   .....+++.|+|||.+. ..++.
T Consensus       132 qi~~~L~~LH---~~~ivH~dikp~NIl~~~~~~~~~~kl~Dfg~a~~~~~~~~---~~~~~~t~~y~aPE~~~-~~~~~  204 (285)
T 3is5_A          132 QMMNALAYFH---SQHVVHKDLKPENILFQDTSPHSPIKIIDFGLAELFKSDEH---STNAAGTALYMAPEVFK-RDVTF  204 (285)
T ss_dssp             HHHHHHHHHH---HTTCCCCCCSGGGEEESSSSTTCCEEECCCCCCCC-------------CTTGGGCCHHHHT-TCCCH
T ss_pred             HHHHHHHHHH---hCCEEECCCCHHHEEEecCCCCCCEEEEeeecceecCCccc---CcCcccccCcCChHHhc-cCCCc
Confidence            9999999999   8999999999999999   4567899999999976543322   23346899999999886 56789


Q ss_pred             chhhHHHHHHHHHHHhcCcccccccccCCCcccchHHHHHHHhhhcccCCCCCCccccCCCchhHHHHHHHHHHHHHHhc
Q 044022          150 KSNVFSFGAFLFELLAGRIHIWDLLKDTHDHGCFFNEYLKNYLEDKRFTGIPAPIIVQDIPCIEKEQQLHASAQLTLECV  229 (241)
Q Consensus       150 ~~Di~s~G~~~~~~~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~cl  229 (241)
                      ++||||||+++|+|++|+.||....         ..+.............    .....        .++.+.+++.+||
T Consensus       205 ~~Di~slG~il~~ll~g~~pf~~~~---------~~~~~~~~~~~~~~~~----~~~~~--------~~~~~~~li~~~L  263 (285)
T 3is5_A          205 KCDIWSAGVVMYFLLTGCLPFTGTS---------LEEVQQKATYKEPNYA----VECRP--------LTPQAVDLLKQML  263 (285)
T ss_dssp             HHHHHHHHHHHHHHHHSSCSSCCSS---------HHHHHHHHHHCCCCCC----C--CC--------CCHHHHHHHHHHT
T ss_pred             ccCeehHHHHHHHHHhCCCCCCCCC---------HHHHHhhhccCCcccc----cccCc--------CCHHHHHHHHHHc
Confidence            9999999999999999999995421         1111111111110000    00001        1256889999999


Q ss_pred             cCCCCCCCCCCC
Q 044022          230 NNSPEDRPTMVD  241 (241)
Q Consensus       230 ~~~p~~Rpt~~e  241 (241)
                      +.||++|||++|
T Consensus       264 ~~dP~~Rps~~e  275 (285)
T 3is5_A          264 TKDPERRPSAAQ  275 (285)
T ss_dssp             CSCTTTSCCHHH
T ss_pred             cCChhhCcCHHH
Confidence            999999999854


No 103
>4f0f_A Serine/threonine-protein kinase ROCO4; LRRK2, ATP-binding, nucleotide serine/threonine-protein kinase, transferase, signaling Pro; HET: ACP; 1.80A {Dictyostelium discoideum} PDB: 4f0g_A 4f1t_A* 4f1m_A* 4f1o_A*
Probab=100.00  E-value=2.7e-39  Score=258.86  Aligned_cols=198  Identities=22%  Similarity=0.333  Sum_probs=153.6

Q ss_pred             HHHHHHHHHHHhcCCCcccceeeeeeeCCcceEEEEecCCCCHHHhhcCCCc-----hHHHHHHHHHHHhchhhcCCCCC
Q 044022           14 GSCINNITYAAQMSHNHILKRIGCCLQTPIPILVFQSVEYGTLRDCIFGAPL-----PRLKIASDIVNSLAYLHFGFPRP   88 (241)
Q Consensus        14 ~~~~~e~~~l~~l~h~~iv~~~~~~~~~~~~~lv~e~~~~~sL~~~l~~~~~-----~~~~~~~~i~~~l~~lh~~~~~~   88 (241)
                      +.+.+|++++++++||||+++++++....  ++||||+++++|.+++.....     ....++.+++.||.|||   +.+
T Consensus        68 ~~~~~E~~~l~~l~h~~i~~~~~~~~~~~--~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~l~~~l~~lH---~~~  142 (287)
T 4f0f_A           68 QEFQREVFIMSNLNHPNIVKLYGLMHNPP--RMVMEFVPCGDLYHRLLDKAHPIKWSVKLRLMLDIALGIEYMQ---NQN  142 (287)
T ss_dssp             HHHHHHHHHHTTCCCTTBCCEEEEETTTT--EEEEECCTTCBHHHHHHCTTSCCCHHHHHHHHHHHHHHHHHHH---TSS
T ss_pred             HHHHHHHHHHHhCCCCCchhhheeecCCC--eEEEEecCCCCHHHHHhcccCCccHHHHHHHHHHHHHHHHHHH---hCC
Confidence            78999999999999999999999986554  799999999999988854421     46789999999999999   888


Q ss_pred             --ceeccCCCCCeeecCCCC-----eEEeeccCceecCCCCcceeecccccCCCccCccccc--ccCCCcchhhHHHHHH
Q 044022           89 --IVLRNFKTQNILFNEENV-----AKWFDFLLSISIPEGETHITTDRVIGTRGYSAPEYIS--ICVLNEKSNVFSFGAF  159 (241)
Q Consensus        89 --ivh~dl~~~nil~~~~~~-----~~l~df~~~~~~~~~~~~~~~~~~~~~~~~~aPE~~~--~~~~~~~~Di~s~G~~  159 (241)
                        ++|+||||+||+++.++.     ++|+|||.+......     .....+++.|+|||++.  ...++.++||||||++
T Consensus       143 ~~ivH~dikp~Nil~~~~~~~~~~~~kl~Dfg~~~~~~~~-----~~~~~g~~~y~aPE~~~~~~~~~~~~~Di~slG~~  217 (287)
T 4f0f_A          143 PPIVHRDLRSPNIFLQSLDENAPVCAKVADFGLSQQSVHS-----VSGLLGNFQWMAPETIGAEEESYTEKADTYSFAMI  217 (287)
T ss_dssp             SCCBCSCCSGGGEEESCCCTTCSCCEEECCCTTCBCCSSC-----EECCCCCCTTSCGGGSSCSSCEECHHHHHHHHHHH
T ss_pred             CCeecCCCCcceEEEeccCCCCceeEEeCCCCcccccccc-----ccccCCCccccCchhhccCCCCcCchhhHHHHHHH
Confidence              999999999999988776     999999998754332     23356899999999984  4567889999999999


Q ss_pred             HHHHHhcCcccccccccCCCcccchHHHHHHHhhhcccCCCCCCccccCCCchhHHHHHHHHHHHHHHhccCCCCCCCCC
Q 044022          160 LFELLAGRIHIWDLLKDTHDHGCFFNEYLKNYLEDKRFTGIPAPIIVQDIPCIEKEQQLHASAQLTLECVNNSPEDRPTM  239 (241)
Q Consensus       160 ~~~~~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~cl~~~p~~Rpt~  239 (241)
                      +|+|++|+.||......       ..............     +.....        .++.+.+++.+||+.||++|||+
T Consensus       218 l~~l~~g~~pf~~~~~~-------~~~~~~~~~~~~~~-----~~~~~~--------~~~~l~~li~~~l~~dp~~Rps~  277 (287)
T 4f0f_A          218 LYTILTGEGPFDEYSYG-------KIKFINMIREEGLR-----PTIPED--------CPPRLRNVIELCWSGDPKKRPHF  277 (287)
T ss_dssp             HHHHHHSSCTTTTCCCC-------HHHHHHHHHHSCCC-----CCCCTT--------SCHHHHHHHHHHTCSSGGGSCCH
T ss_pred             HHHHHcCCCCCcccccc-------HHHHHHHHhccCCC-----CCCCcc--------cCHHHHHHHHHHhcCChhhCcCH
Confidence            99999999999652111       11111111111111     111122        22578999999999999999998


Q ss_pred             CC
Q 044022          240 VD  241 (241)
Q Consensus       240 ~e  241 (241)
                      +|
T Consensus       278 ~~  279 (287)
T 4f0f_A          278 SY  279 (287)
T ss_dssp             HH
T ss_pred             HH
Confidence            53


No 104
>3og7_A AKAP9-BRAF fusion protein; proto-oncogene, V600E, kinase, transferase; HET: 032; 2.45A {Homo sapiens} SCOP: d.144.1.7 PDB: 4fk3_A* 3c4c_A* 3c4d_A* 3idp_A* 4g9r_A* 3ii5_A* 4e26_A* 3ppj_A* 3ppk_A* 3prf_A* 3pri_A* 3psb_A* 3psd_A* 3q4c_A* 3skc_A* 3tv4_A* 3tv6_A* 3d4q_A* 4e4x_A* 4g9c_A* ...
Probab=100.00  E-value=1.3e-39  Score=261.08  Aligned_cols=209  Identities=21%  Similarity=0.333  Sum_probs=151.5

Q ss_pred             ccHHHHHHHHHHHHhcCCCcccceeeeeeeCCcceEEEEecCCCCHHHhhcCCCc-----hHHHHHHHHHHHhchhhcCC
Q 044022           11 HTYGSCINNITYAAQMSHNHILKRIGCCLQTPIPILVFQSVEYGTLRDCIFGAPL-----PRLKIASDIVNSLAYLHFGF   85 (241)
Q Consensus        11 ~~~~~~~~e~~~l~~l~h~~iv~~~~~~~~~~~~~lv~e~~~~~sL~~~l~~~~~-----~~~~~~~~i~~~l~~lh~~~   85 (241)
                      ...+.|.+|++++++++||||+++++++ ..+..++||||+++++|.+++.....     ....++.+++.||.|||   
T Consensus        62 ~~~~~~~~E~~~l~~l~h~~iv~~~~~~-~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~i~~qi~~~L~~lH---  137 (289)
T 3og7_A           62 QQLQAFKNEVGVLRKTRHVNILLFMGYS-TAPQLAIVTQWCEGSSLYHHLHASETKFEMKKLIDIARQTARGMDYLH---  137 (289)
T ss_dssp             HHHHHHHHHHHHHTTCCCTTBCCEEEEE-CSSSCEEEEECCCEEEHHHHHTTC---CCHHHHHHHHHHHHHHHHHHH---
T ss_pred             HHHHHHHHHHHHHHhCCCCcEEEEEeec-cCCccEEEEEecCCCcHHHHHhhccCCCCHHHHHHHHHHHHHHHHHHH---
Confidence            4567799999999999999999999965 55668999999999999999865422     46789999999999999   


Q ss_pred             CCCceeccCCCCCeeecCCCCeEEeeccCceecCCCCcceeecccccCCCccCccccc---ccCCCcchhhHHHHHHHHH
Q 044022           86 PRPIVLRNFKTQNILFNEENVAKWFDFLLSISIPEGETHITTDRVIGTRGYSAPEYIS---ICVLNEKSNVFSFGAFLFE  162 (241)
Q Consensus        86 ~~~ivh~dl~~~nil~~~~~~~~l~df~~~~~~~~~~~~~~~~~~~~~~~~~aPE~~~---~~~~~~~~Di~s~G~~~~~  162 (241)
                      +.+++||||||+||+++.++.++|+|||.+................|++.|+|||.+.   +..++.++||||||+++|+
T Consensus       138 ~~~i~H~Dlkp~Nil~~~~~~~kl~Dfg~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~Di~slG~il~e  217 (289)
T 3og7_A          138 AKSIIHRDLKSNNIFLHEDNTVKIGDFGLATEKSRWSGSHQFEQLSGSILWMAPEVIRMQDSNPYSFQSDVYAFGIVLYE  217 (289)
T ss_dssp             HTTCCCSCCCGGGEEEETTTEEEECCCC------------------CCCTTCCHHHHC----CCSCHHHHHHHHHHHHHH
T ss_pred             hCCcccccCccceEEECCCCCEEEccceeccccccccccccccccCCCccccCchhhcccCCCCCCcccchHHHHHHHHH
Confidence            8999999999999999999999999999987654332222223456899999999986   5677889999999999999


Q ss_pred             HHhcCcccccccccCCCcccchHHHHHHHhhhcccCCCCCCccccCCCchhHHHHHHHHHHHHHHhccCCCCCCCCCCC
Q 044022          163 LLAGRIHIWDLLKDTHDHGCFFNEYLKNYLEDKRFTGIPAPIIVQDIPCIEKEQQLHASAQLTLECVNNSPEDRPTMVD  241 (241)
Q Consensus       163 ~~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~cl~~~p~~Rpt~~e  241 (241)
                      |++|+.||.....         .+........+...... .....        ..+..+.+++.+||+.||++|||++|
T Consensus       218 l~~g~~p~~~~~~---------~~~~~~~~~~~~~~~~~-~~~~~--------~~~~~l~~li~~~l~~~p~~Rps~~e  278 (289)
T 3og7_A          218 LMTGQLPYSNINN---------RDQIIEMVGRGSLSPDL-SKVRS--------NCPKRMKRLMAECLKKKRDERPSFPR  278 (289)
T ss_dssp             HHHSSCTTSSCCC---------HHHHHHHHHHTSCCCCT-TSSCT--------TSCHHHHHHHHHHTCSSGGGSCCHHH
T ss_pred             HHHCCCCccccch---------HHHHHHHhcccccCcch-hhccc--------cCCHHHHHHHHHHccCChhhCCCHHH
Confidence            9999999965211         11122222222211111 11111        22367899999999999999999753


No 105
>3cc6_A Protein tyrosine kinase 2 beta; focal adhesion kinase, structural genomics, structural genom consortium, SGC, ATP-binding, membrane; 1.60A {Homo sapiens} PDB: 3fzs_A* 3et7_A 3fzo_A* 3fzr_A* 3fzp_A* 3fzt_A* 3h3c_A*
Probab=100.00  E-value=4e-40  Score=262.99  Aligned_cols=212  Identities=20%  Similarity=0.274  Sum_probs=160.5

Q ss_pred             cccccccccccHHHHHHHHHHHHhcCCCcccceeeeeeeCCcceEEEEecCCCCHHHhhcCCC--c---hHHHHHHHHHH
Q 044022            2 KFYGHEYHRHTYGSCINNITYAAQMSHNHILKRIGCCLQTPIPILVFQSVEYGTLRDCIFGAP--L---PRLKIASDIVN   76 (241)
Q Consensus         2 K~~~~~~~~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~~~~~~~lv~e~~~~~sL~~~l~~~~--~---~~~~~~~~i~~   76 (241)
                      |.+.........+++.+|+.++++++||||+++++++.. +..++||||+++++|.+++....  .   ....++.+++.
T Consensus        46 K~~~~~~~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~-~~~~~v~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~i~~  124 (281)
T 3cc6_A           46 KTCKKDCTLDNKEKFMSEAVIMKNLDHPHIVKLIGIIEE-EPTWIIMELYPYGELGHYLERNKNSLKVLTLVLYSLQICK  124 (281)
T ss_dssp             EECCTTSCHHHHHHHHHHHHHHHHHCCTTBCCEEEEECS-SSCEEEEECCTTCBHHHHHHHHTTTCCHHHHHHHHHHHHH
T ss_pred             EecccccCchHHHHHHHHHHHHHhCCCCCcceEEEEEcC-CCCEEEEecCCCCCHHHHHHhccccCCHHHHHHHHHHHHH
Confidence            455444444567789999999999999999999999865 45789999999999999986432  1   46788999999


Q ss_pred             HhchhhcCCCCCceeccCCCCCeeecCCCCeEEeeccCceecCCCCcceeecccccCCCccCcccccccCCCcchhhHHH
Q 044022           77 SLAYLHFGFPRPIVLRNFKTQNILFNEENVAKWFDFLLSISIPEGETHITTDRVIGTRGYSAPEYISICVLNEKSNVFSF  156 (241)
Q Consensus        77 ~l~~lh~~~~~~ivh~dl~~~nil~~~~~~~~l~df~~~~~~~~~~~~~~~~~~~~~~~~~aPE~~~~~~~~~~~Di~s~  156 (241)
                      ||.|||   +.+++|+||||+||+++.++.++|+|||.+......... ......+++.|+|||.+.+..++.++|||||
T Consensus       125 ~l~~lH---~~~i~H~dlkp~Nil~~~~~~~kl~Dfg~~~~~~~~~~~-~~~~~~~~~~y~aPE~~~~~~~~~~~Di~sl  200 (281)
T 3cc6_A          125 AMAYLE---SINCVHRDIAVRNILVASPECVKLGDFGLSRYIEDEDYY-KASVTRLPIKWMSPESINFRRFTTASDVWMF  200 (281)
T ss_dssp             HHHHHH---HTTCCCCCCSGGGEEEEETTEEEECCCCGGGCC----------CCCCCGGGCCHHHHHHCCCCHHHHHHHH
T ss_pred             HHHHHH---HCCcccCCCccceEEECCCCcEEeCccCCCccccccccc-ccccCCCCcceeCchhhccCCCCchhccHHH
Confidence            999999   899999999999999999999999999998765443221 1123456778999999998899999999999


Q ss_pred             HHHHHHHHh-cCcccccccccCCCcccchHHHHHHHhhhcccCCCCCCccccCCCchhHHHHHHHHHHHHHHhccCCCCC
Q 044022          157 GAFLFELLA-GRIHIWDLLKDTHDHGCFFNEYLKNYLEDKRFTGIPAPIIVQDIPCIEKEQQLHASAQLTLECVNNSPED  235 (241)
Q Consensus       157 G~~~~~~~~-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~cl~~~p~~  235 (241)
                      |+++|+|++ |+.||......         +....... ......+     .        ..++.+.+++.+||+.||++
T Consensus       201 G~il~~llt~g~~p~~~~~~~---------~~~~~~~~-~~~~~~~-----~--------~~~~~l~~li~~~l~~~p~~  257 (281)
T 3cc6_A          201 AVCMWEILSFGKQPFFWLENK---------DVIGVLEK-GDRLPKP-----D--------LCPPVLYTLMTRCWDYDPSD  257 (281)
T ss_dssp             HHHHHHHHTTTCCTTTTSCGG---------GHHHHHHH-TCCCCCC-----T--------TCCHHHHHHHHHHTCSSGGG
T ss_pred             HHHHHHHHhCCCCCcccCChH---------HHHHHHhc-CCCCCCC-----C--------CCCHHHHHHHHHHccCCchh
Confidence            999999998 99999642211         11111111 1111111     1        12257889999999999999


Q ss_pred             CCCCCC
Q 044022          236 RPTMVD  241 (241)
Q Consensus       236 Rpt~~e  241 (241)
                      |||++|
T Consensus       258 Rps~~e  263 (281)
T 3cc6_A          258 RPRFTE  263 (281)
T ss_dssp             SCCHHH
T ss_pred             CcCHHH
Confidence            999753


No 106
>1ob3_A PFPK5, cell division control protein 2 homolog; transferase, serine/threonine-protein kinase, ATP-binding, phosphorylation, CDK; 1.9A {Plasmodium falciparum} SCOP: d.144.1.7 PDB: 1v0p_A* 1v0o_A* 1v0b_A
Probab=100.00  E-value=2.5e-39  Score=259.34  Aligned_cols=156  Identities=22%  Similarity=0.293  Sum_probs=131.6

Q ss_pred             ccHHHHHHHHHHHHhcCCCcccceeeeeeeCCcceEEEEecCCCCHHHhhcCCC-----chHHHHHHHHHHHhchhhcCC
Q 044022           11 HTYGSCINNITYAAQMSHNHILKRIGCCLQTPIPILVFQSVEYGTLRDCIFGAP-----LPRLKIASDIVNSLAYLHFGF   85 (241)
Q Consensus        11 ~~~~~~~~e~~~l~~l~h~~iv~~~~~~~~~~~~~lv~e~~~~~sL~~~l~~~~-----~~~~~~~~~i~~~l~~lh~~~   85 (241)
                      ...+.+.+|++++++++||||+++++++...+..++||||+. ++|.+++....     .....++.|++.||.|||   
T Consensus        42 ~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~lv~e~~~-~~l~~~~~~~~~~~~~~~~~~~~~qi~~~l~~lH---  117 (288)
T 1ob3_A           42 GIPSTTIREISILKELKHSNIVKLYDVIHTKKRLVLVFEHLD-QDLKKLLDVCEGGLESVTAKSFLLQLLNGIAYCH---  117 (288)
T ss_dssp             CCCHHHHHHHHGGGGCCCTTBCCEEEEEECSSCEEEEEECCS-EEHHHHHHTSTTCCCHHHHHHHHHHHHHHHHHHH---
T ss_pred             ccchhHHHHHHHHHhcCCCCEeeeeeEEccCCeEEEEEEecC-CCHHHHHHhcccCCCHHHHHHHHHHHHHHHHHHH---
Confidence            345778899999999999999999999999999999999997 59998886532     146789999999999999   


Q ss_pred             CCCceeccCCCCCeeecCCCCeEEeeccCceecCCCCcceeecccccCCCccCccccccc-CCCcchhhHHHHHHHHHHH
Q 044022           86 PRPIVLRNFKTQNILFNEENVAKWFDFLLSISIPEGETHITTDRVIGTRGYSAPEYISIC-VLNEKSNVFSFGAFLFELL  164 (241)
Q Consensus        86 ~~~ivh~dl~~~nil~~~~~~~~l~df~~~~~~~~~~~~~~~~~~~~~~~~~aPE~~~~~-~~~~~~Di~s~G~~~~~~~  164 (241)
                      +.+++||||||+||+++.++.+||+|||.+.........  .....+|+.|+|||++.+. .++.++||||||+++|+|+
T Consensus       118 ~~~i~H~dlkp~Nil~~~~~~~kl~Dfg~~~~~~~~~~~--~~~~~~t~~y~aPE~~~~~~~~~~~~DiwslG~il~~l~  195 (288)
T 1ob3_A          118 DRRVLHRDLKPQNLLINREGELKIADFGLARAFGIPVRK--YTHEIVTLWYRAPDVLMGSKKYSTTIDIWSVGCIFAEMV  195 (288)
T ss_dssp             HTTCCCSCCCGGGEEECTTSCEEECCTTHHHHHCC-----------CCCTTCCHHHHTTCCSCCTHHHHHHHHHHHHHHH
T ss_pred             HCCeecCCCCHHHEEEcCCCCEEEeECccccccCccccc--cccccccccccCchheeCCCCCCcHHHHHHHHHHHHHHH
Confidence            899999999999999999999999999998765432211  1234679999999998764 5899999999999999999


Q ss_pred             hcCccccc
Q 044022          165 AGRIHIWD  172 (241)
Q Consensus       165 ~g~~p~~~  172 (241)
                      +|+.||..
T Consensus       196 ~g~~pf~~  203 (288)
T 1ob3_A          196 NGTPLFPG  203 (288)
T ss_dssp             HSSCSCCC
T ss_pred             hCCCCCCC
Confidence            99999965


No 107
>2eva_A TAK1 kinase - TAB1 chimera fusion protein; transferase/transferase activator complex; HET: ADN; 2.00A {Homo sapiens}
Probab=100.00  E-value=3.9e-39  Score=260.62  Aligned_cols=202  Identities=23%  Similarity=0.361  Sum_probs=151.7

Q ss_pred             cHHHHHHHHHHHHhcCCCcccceeeeeeeCCcceEEEEecCCCCHHHhhcCCCc-------hHHHHHHHHHHHhchhhcC
Q 044022           12 TYGSCINNITYAAQMSHNHILKRIGCCLQTPIPILVFQSVEYGTLRDCIFGAPL-------PRLKIASDIVNSLAYLHFG   84 (241)
Q Consensus        12 ~~~~~~~e~~~l~~l~h~~iv~~~~~~~~~~~~~lv~e~~~~~sL~~~l~~~~~-------~~~~~~~~i~~~l~~lh~~   84 (241)
                      ..+.|.+|++++++++||||+++++++.  +..++||||+++++|.+++.....       ..+.++.+++.||.|||+.
T Consensus        44 ~~~~~~~E~~~l~~l~hp~iv~~~~~~~--~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~qi~~~l~~LH~~  121 (307)
T 2eva_A           44 ERKAFIVELRQLSRVNHPNIVKLYGACL--NPVCLVMEYAEGGSLYNVLHGAEPLPYYTAAHAMSWCLQCSQGVAYLHSM  121 (307)
T ss_dssp             HHHHHHHHHHHHHHCCCTTBCCEEEBCT--TTTEEEEECCTTCBHHHHHHCSSSEECCCHHHHHHHHHHHHHHHHHHHTC
T ss_pred             HHHHHHHHHHHHhcCCCCCcCeEEEEEc--CCcEEEEEcCCCCCHHHHHhccCCCCccCHHHHHHHHHHHHHHHHHHHhC
Confidence            4577999999999999999999999986  458999999999999999976531       4578899999999999932


Q ss_pred             CCCCceeccCCCCCeeecCCCC-eEEeeccCceecCCCCcceeecccccCCCccCcccccccCCCcchhhHHHHHHHHHH
Q 044022           85 FPRPIVLRNFKTQNILFNEENV-AKWFDFLLSISIPEGETHITTDRVIGTRGYSAPEYISICVLNEKSNVFSFGAFLFEL  163 (241)
Q Consensus        85 ~~~~ivh~dl~~~nil~~~~~~-~~l~df~~~~~~~~~~~~~~~~~~~~~~~~~aPE~~~~~~~~~~~Di~s~G~~~~~~  163 (241)
                      ..++++||||||+||+++.++. +||+|||.+.......     ....|++.|+|||++.+..++.++||||||+++|+|
T Consensus       122 ~~~~ivH~dlkp~NIll~~~~~~~kl~Dfg~~~~~~~~~-----~~~~gt~~y~aPE~~~~~~~~~~~Di~slG~il~el  196 (307)
T 2eva_A          122 QPKALIHRDLKPPNLLLVAGGTVLKICDFGTACDIQTHM-----TNNKGSAAWMAPEVFEGSNYSEKCDVFSWGIILWEV  196 (307)
T ss_dssp             SSSCCCCCCCSGGGEEEETTTTEEEECCCCC-----------------CCTTSSCHHHHTCCCCCTHHHHHHHHHHHHHH
T ss_pred             CCCCeecCCCChhHEEEeCCCCEEEEccccccccccccc-----ccCCCCCceEChhhhCCCCCCcHHHHHHHHHHHHHH
Confidence            2289999999999999998886 7999999987544321     233589999999999988999999999999999999


Q ss_pred             HhcCcccccccccCCCcccchHHHHHHHhhhcccCCCCCCccccCCCchhHHHHHHHHHHHHHHhccCCCCCCCCCCC
Q 044022          164 LAGRIHIWDLLKDTHDHGCFFNEYLKNYLEDKRFTGIPAPIIVQDIPCIEKEQQLHASAQLTLECVNNSPEDRPTMVD  241 (241)
Q Consensus       164 ~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~cl~~~p~~Rpt~~e  241 (241)
                      ++|+.||......       .......... +..     +......        +..+.+++.+||+.||++|||++|
T Consensus       197 ~~g~~p~~~~~~~-------~~~~~~~~~~-~~~-----~~~~~~~--------~~~l~~li~~~l~~dp~~Rps~~e  253 (307)
T 2eva_A          197 ITRRKPFDEIGGP-------AFRIMWAVHN-GTR-----PPLIKNL--------PKPIESLMTRCWSKDPSQRPSMEE  253 (307)
T ss_dssp             HHTCCTTTTTCSS-------HHHHHHHHHT-TCC-----CCCBTTC--------CHHHHHHHHHHTCSSGGGSCCHHH
T ss_pred             HHCCCCchhhCcc-------HHHHHHHHhc-CCC-----CCccccc--------CHHHHHHHHHHhcCChhhCcCHHH
Confidence            9999999642111       1111111111 111     1111222        256889999999999999999753


No 108
>4aw2_A Serine/threonine-protein kinase MRCK alpha; transferase, CDC42BPA; HET: 22E; 1.70A {Rattus norvegicus} PDB: 3tku_A* 3qfv_A*
Probab=100.00  E-value=1.9e-39  Score=273.61  Aligned_cols=207  Identities=17%  Similarity=0.173  Sum_probs=162.0

Q ss_pred             cHHHHHHHHHHHHhcCCCcccceeeeeeeCCcceEEEEecCCCCHHHhhcCC--Cc---hHHHHHHHHHHHhchhhcCCC
Q 044022           12 TYGSCINNITYAAQMSHNHILKRIGCCLQTPIPILVFQSVEYGTLRDCIFGA--PL---PRLKIASDIVNSLAYLHFGFP   86 (241)
Q Consensus        12 ~~~~~~~e~~~l~~l~h~~iv~~~~~~~~~~~~~lv~e~~~~~sL~~~l~~~--~~---~~~~~~~~i~~~l~~lh~~~~   86 (241)
                      ....+.+|+.++..++||||++++++|...+..++||||+++|+|.+++...  ..   ....++.+++.||.|||   +
T Consensus       117 ~~~~~~~E~~il~~~~hp~Iv~l~~~~~~~~~~~lV~Ey~~gg~L~~~l~~~~~~l~e~~~~~~~~qi~~aL~~LH---~  193 (437)
T 4aw2_A          117 ETACFREERDVLVNGDSKWITTLHYAFQDDNNLYLVMDYYVGGDLLTLLSKFEDRLPEEMARFYLAEMVIAIDSVH---Q  193 (437)
T ss_dssp             TTCCHHHHHHHHHHSCTTTBCCEEEEEECSSEEEEEECCCTTCBHHHHHHTTTTCCCHHHHHHHHHHHHHHHHHHH---H
T ss_pred             HHHHHHHHHHHHHhCCCCCEEEEEEEEeeCCEEEEEEecCCCCcHHHHHHHccCCCCHHHHHHHHHHHHHHHHHHH---h
Confidence            3445889999999999999999999999999999999999999999999763  22   46778999999999999   8


Q ss_pred             CCceeccCCCCCeeecCCCCeEEeeccCceecCCCCcceeecccccCCCccCccccc-----ccCCCcchhhHHHHHHHH
Q 044022           87 RPIVLRNFKTQNILFNEENVAKWFDFLLSISIPEGETHITTDRVIGTRGYSAPEYIS-----ICVLNEKSNVFSFGAFLF  161 (241)
Q Consensus        87 ~~ivh~dl~~~nil~~~~~~~~l~df~~~~~~~~~~~~~~~~~~~~~~~~~aPE~~~-----~~~~~~~~Di~s~G~~~~  161 (241)
                      .+|+||||||+|||++.++.+||+|||++......... ......||+.|+|||++.     ...++.++||||||+++|
T Consensus       194 ~giiHrDLKp~NILl~~~g~vkL~DFGla~~~~~~~~~-~~~~~~GT~~Y~APE~l~~~~~~~~~~~~~~DvwSlGvil~  272 (437)
T 4aw2_A          194 LHYVHRDIKPDNILMDMNGHIRLADFGSCLKLMEDGTV-QSSVAVGTPDYISPEILQAMEGGKGRYGPECDWWSLGVCMY  272 (437)
T ss_dssp             TTEECCCCSGGGEEECTTSCEEECCCTTCEECCTTSCE-ECCSCCSCGGGCCHHHHHHHHTSCCEECTHHHHHHHHHHHH
T ss_pred             CCeEecccCHHHeeEcCCCCEEEcchhhhhhcccCCCc-ccccccCCcCeeChHHHhhcccCCCCCCCcCeeHHHHHHHH
Confidence            99999999999999999999999999999776544332 223457999999999997     456899999999999999


Q ss_pred             HHHhcCcccccccccCCCcccchHHHHHHHhhhcccCCCCCCccccCCCchhHHHHHHHHHHHHHHhccCCCCC--CCCC
Q 044022          162 ELLAGRIHIWDLLKDTHDHGCFFNEYLKNYLEDKRFTGIPAPIIVQDIPCIEKEQQLHASAQLTLECVNNSPED--RPTM  239 (241)
Q Consensus       162 ~~~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~cl~~~p~~--Rpt~  239 (241)
                      +|++|+.||...         ...+..............+.  ....        .++.+.+|+.+||..+|++  ||++
T Consensus       273 elltG~~Pf~~~---------~~~~~~~~i~~~~~~~~~p~--~~~~--------~s~~~~dLi~~lL~~~~~r~~r~~~  333 (437)
T 4aw2_A          273 EMLYGETPFYAE---------SLVETYGKIMNHKERFQFPT--QVTD--------VSENAKDLIRRLICSREHRLGQNGI  333 (437)
T ss_dssp             HHHHSSCTTCCS---------SHHHHHHHHHTHHHHCCCCS--SCCC--------SCHHHHHHHHTTSSCGGGCTTTTTT
T ss_pred             HHHhCCCCCCCC---------ChhHHHHhhhhccccccCCc--cccc--------CCHHHHHHHHHHhcccccccCCCCH
Confidence            999999999652         11222222221111111111  1111        2257889999999998888  9987


Q ss_pred             CC
Q 044022          240 VD  241 (241)
Q Consensus       240 ~e  241 (241)
                      +|
T Consensus       334 ~e  335 (437)
T 4aw2_A          334 ED  335 (437)
T ss_dssp             HH
T ss_pred             HH
Confidence            53


No 109
>3f66_A Hepatocyte growth factor receptor; C-Met, protein kinase, quinoxaline, alternative splicing, ATP-binding, chromosomal rearrangement; HET: IHX; 1.40A {Homo sapiens} PDB: 3i5n_A* 3u6h_A* 3u6i_A* 4deg_A* 4deh_A* 4dei_A* 3ccn_A* 2rfn_A* 2rfs_A* 3cd8_A* 3efj_A* 3efk_A* 3lq8_A* 3zxz_A* 2wkm_A* 2wgj_A* 3zze_A* 4aoi_A* 4ap7_A* 3q6w_A* ...
Probab=100.00  E-value=1e-39  Score=262.65  Aligned_cols=214  Identities=21%  Similarity=0.279  Sum_probs=159.9

Q ss_pred             cccccccccccHHHHHHHHHHHHhcCCCcccceeeeee-eCCcceEEEEecCCCCHHHhhcCCCc-----hHHHHHHHHH
Q 044022            2 KFYGHEYHRHTYGSCINNITYAAQMSHNHILKRIGCCL-QTPIPILVFQSVEYGTLRDCIFGAPL-----PRLKIASDIV   75 (241)
Q Consensus         2 K~~~~~~~~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~-~~~~~~lv~e~~~~~sL~~~l~~~~~-----~~~~~~~~i~   75 (241)
                      |.+.........+++.+|+.++++++||||+++++++. .++..++||||+++++|.+++.....     ....++.+++
T Consensus        59 k~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~~~v~e~~~~~~L~~~l~~~~~~~~~~~~~~i~~ql~  138 (298)
T 3f66_A           59 KSLNRITDIGEVSQFLTEGIIMKDFSHPNVLSLLGICLRSEGSPLVVLPYMKHGDLRNFIRNETHNPTVKDLIGFGLQVA  138 (298)
T ss_dssp             EEETTCCSHHHHHHHHHHHHHHHTCCCTTBCCCCEEECCSSSCCEEEEECCTTCBHHHHHHCTTCCCCHHHHHHHHHHHH
T ss_pred             EecccCCCHHHHHHHHHHHHHHHhCCCCCEeeeeeEEEcCCCceEEEEeCCCCCCHHHHHHhcccCCCHHHHHHHHHHHH
Confidence            44444334445678999999999999999999999865 45678999999999999999965421     4678899999


Q ss_pred             HHhchhhcCCCCCceeccCCCCCeeecCCCCeEEeeccCceecCCCCc--ceeecccccCCCccCcccccccCCCcchhh
Q 044022           76 NSLAYLHFGFPRPIVLRNFKTQNILFNEENVAKWFDFLLSISIPEGET--HITTDRVIGTRGYSAPEYISICVLNEKSNV  153 (241)
Q Consensus        76 ~~l~~lh~~~~~~ivh~dl~~~nil~~~~~~~~l~df~~~~~~~~~~~--~~~~~~~~~~~~~~aPE~~~~~~~~~~~Di  153 (241)
                      .||.|||   +.+++||||||+||+++.++.++|+|||.+........  ........+|+.|+|||.+.+..++.++||
T Consensus       139 ~~l~~lH---~~~i~H~dikp~Nil~~~~~~~kl~Dfg~a~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di  215 (298)
T 3f66_A          139 KGMKYLA---SKKFVHRDLAARNCMLDEKFTVKVADFGLARDMYDKEYYSVHNKTGAKLPVKWMALESLQTQKFTTKSDV  215 (298)
T ss_dssp             HHHHHHH---HTTCCCSCCSGGGEEECTTCCEEECSCGGGCCCSCGGGCBC-----CCBCGGGSCHHHHHHCCCCHHHHH
T ss_pred             HHHHHHH---hCCccCCCCchheEEECCCCCEEECcccccccccccchhccccccCCCCCccccChHHhcCCCCChHHHH
Confidence            9999999   89999999999999999999999999999976543321  112233456788999999998899999999


Q ss_pred             HHHHHHHHHHHh-cCcccccccccCCCcccchHHHHHHHhhhcccCCCCCCccccCCCchhHHHHHHHHHHHHHHhccCC
Q 044022          154 FSFGAFLFELLA-GRIHIWDLLKDTHDHGCFFNEYLKNYLEDKRFTGIPAPIIVQDIPCIEKEQQLHASAQLTLECVNNS  232 (241)
Q Consensus       154 ~s~G~~~~~~~~-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~cl~~~  232 (241)
                      ||||+++|++++ |.+||......         +...... .....     .....        .+..+.+++.+||+.|
T Consensus       216 ~slG~il~~l~~~~~~~~~~~~~~---------~~~~~~~-~~~~~-----~~~~~--------~~~~l~~li~~~l~~~  272 (298)
T 3f66_A          216 WSFGVLLWELMTRGAPPYPDVNTF---------DITVYLL-QGRRL-----LQPEY--------CPDPLYEVMLKCWHPK  272 (298)
T ss_dssp             HHHHHHHHHHHTTSCCSSTTSCTT---------THHHHHH-TTCCC-----CCCTT--------CCHHHHHHHHHHTCSS
T ss_pred             HHHHHHHHHHHhCCCCCCccCCHH---------HHHHHHh-cCCCC-----CCCcc--------CCHHHHHHHHHHcCCC
Confidence            999999999999 55565432111         1111111 11110     01111        1256889999999999


Q ss_pred             CCCCCCCCC
Q 044022          233 PEDRPTMVD  241 (241)
Q Consensus       233 p~~Rpt~~e  241 (241)
                      |++|||++|
T Consensus       273 p~~Rps~~e  281 (298)
T 3f66_A          273 AEMRPSFSE  281 (298)
T ss_dssp             GGGSCCHHH
T ss_pred             hhhCcCHHH
Confidence            999999753


No 110
>3kmu_A ILK, integrin-linked kinase; cell adhesion, ANK repeat, ATP-binding, cell junction, cell membrane, integrin-binding protein, membrane, nucleotide- binding; 1.80A {Homo sapiens} SCOP: d.144.1.0 PDB: 3kmw_A* 3rep_A*
Probab=100.00  E-value=8.4e-40  Score=259.36  Aligned_cols=208  Identities=19%  Similarity=0.273  Sum_probs=161.1

Q ss_pred             ccccccc-ccccHHHHHHHHHHHHhcCCCcccceeeeeeeC--CcceEEEEecCCCCHHHhhcCCCc------hHHHHHH
Q 044022            2 KFYGHEY-HRHTYGSCINNITYAAQMSHNHILKRIGCCLQT--PIPILVFQSVEYGTLRDCIFGAPL------PRLKIAS   72 (241)
Q Consensus         2 K~~~~~~-~~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~~~--~~~~lv~e~~~~~sL~~~l~~~~~------~~~~~~~   72 (241)
                      |++.... .....+.|.+|+.++++++||||+++++++...  +..++||||+++|+|.+++.....      .+..++.
T Consensus        39 K~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~i~~  118 (271)
T 3kmu_A           39 KVLKVRDWSTRKSRDFNEECPRLRIFSHPNVLPVLGACQSPPAPHPTLITHWMPYGSLYNVLHEGTNFVVDQSQAVKFAL  118 (271)
T ss_dssp             EEECCTTCCHHHHHHHHHHGGGGCCCSCTTEECEEEEECTTTSSSCEEEEECCTTCBHHHHHHSCSSCCCCHHHHHHHHH
T ss_pred             EEecccccCHHHHHHHHHHHHHHHhcCCCchhheEEEEccCCCCCeEeeecccCCCcHHHHHhhcccCCCCHHHHHHHHH
Confidence            4554332 234567799999999999999999999999876  788999999999999999976531      4678999


Q ss_pred             HHHHHhchhhcCCCCC--ceeccCCCCCeeecCCCCeEEeeccCceecCCCCcceeecccccCCCccCcccccccCCCc-
Q 044022           73 DIVNSLAYLHFGFPRP--IVLRNFKTQNILFNEENVAKWFDFLLSISIPEGETHITTDRVIGTRGYSAPEYISICVLNE-  149 (241)
Q Consensus        73 ~i~~~l~~lh~~~~~~--ivh~dl~~~nil~~~~~~~~l~df~~~~~~~~~~~~~~~~~~~~~~~~~aPE~~~~~~~~~-  149 (241)
                      +++.||.|||   +.+  ++|+||||+||+++.++.++++|||++.....       ....+|+.|+|||.+.+...+. 
T Consensus       119 qi~~~l~~lH---~~~~~i~H~dikp~Nil~~~~~~~~l~~~~~~~~~~~-------~~~~~t~~y~aPE~~~~~~~~~~  188 (271)
T 3kmu_A          119 DMARGMAFLH---TLEPLIPRHALNSRSVMIDEDMTARISMADVKFSFQS-------PGRMYAPAWVAPEALQKKPEDTN  188 (271)
T ss_dssp             HHHHHHHHHT---TSSSCCTTCCCSGGGEEECTTSCEEEEGGGSCCTTSC-------TTCBSCGGGSCHHHHHSCGGGSC
T ss_pred             HHHHHHHHHh---cCCCceecCCCccceEEEcCCcceeEEeccceeeecc-------cCccCCccccChhhhccCCCCCC
Confidence            9999999999   888  99999999999999999999999888754322       2246789999999998765444 


Q ss_pred             --chhhHHHHHHHHHHHhcCcccccccccCCCcccchHHHHHHHhhhcccCCCCCCccccCCCchhHHHHHHHHHHHHHH
Q 044022          150 --KSNVFSFGAFLFELLAGRIHIWDLLKDTHDHGCFFNEYLKNYLEDKRFTGIPAPIIVQDIPCIEKEQQLHASAQLTLE  227 (241)
Q Consensus       150 --~~Di~s~G~~~~~~~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~  227 (241)
                        ++||||||+++|+|++|+.||....         ..+............     .....        .+..+.+++.+
T Consensus       189 ~~~~Di~slG~il~el~~g~~p~~~~~---------~~~~~~~~~~~~~~~-----~~~~~--------~~~~~~~li~~  246 (271)
T 3kmu_A          189 RRSADMWSFAVLLWELVTREVPFADLS---------NMEIGMKVALEGLRP-----TIPPG--------ISPHVSKLMKI  246 (271)
T ss_dssp             HHHHHHHHHHHHHHHHHHCSCTTTTSC---------HHHHHHHHHHSCCCC-----CCCTT--------CCHHHHHHHHH
T ss_pred             CchhhHHHHHHHHHHHHhCCCCccccC---------hHHHHHHHHhcCCCC-----CCCCC--------CCHHHHHHHHH
Confidence              7999999999999999999996421         112222222222111     11112        22578999999


Q ss_pred             hccCCCCCCCCCCC
Q 044022          228 CVNNSPEDRPTMVD  241 (241)
Q Consensus       228 cl~~~p~~Rpt~~e  241 (241)
                      ||+.||++|||++|
T Consensus       247 ~l~~~p~~Rps~~~  260 (271)
T 3kmu_A          247 CMNEDPAKRPKFDM  260 (271)
T ss_dssp             HTCSSGGGSCCHHH
T ss_pred             HcCCChhhCcCHHH
Confidence            99999999999853


No 111
>2w4o_A Calcium/calmodulin-dependent protein kinase type IV; calmodulin-binding, nucleotide-binding, serine/threonine-protein kinase, ATP-binding; HET: DKI; 2.17A {Homo sapiens}
Probab=100.00  E-value=1.5e-39  Score=267.44  Aligned_cols=204  Identities=24%  Similarity=0.297  Sum_probs=147.6

Q ss_pred             HHHHHHHHHHHHhcCCCcccceeeeeeeCCcceEEEEecCCCCHHHhhcCCCc----hHHHHHHHHHHHhchhhcCCCCC
Q 044022           13 YGSCINNITYAAQMSHNHILKRIGCCLQTPIPILVFQSVEYGTLRDCIFGAPL----PRLKIASDIVNSLAYLHFGFPRP   88 (241)
Q Consensus        13 ~~~~~~e~~~l~~l~h~~iv~~~~~~~~~~~~~lv~e~~~~~sL~~~l~~~~~----~~~~~~~~i~~~l~~lh~~~~~~   88 (241)
                      .+.+.+|++++++++||||+++++++...+..++||||+++++|.+++.....    ....++.|++.||.|||   +.+
T Consensus        92 ~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~i~~qi~~~L~~LH---~~~  168 (349)
T 2w4o_A           92 KKIVRTEIGVLLRLSHPNIIKLKEIFETPTEISLVLELVTGGELFDRIVEKGYYSERDAADAVKQILEAVAYLH---ENG  168 (349)
T ss_dssp             -------CHHHHHCCCTTBCCEEEEEECSSEEEEEECCCCSCBHHHHHTTCSSCCHHHHHHHHHHHHHHHHHHH---HTT
T ss_pred             HHHHHHHHHHHHhCCCCCCcceeeeEecCCeEEEEEEeCCCCCHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHH---HCC
Confidence            45688999999999999999999999999999999999999999999876532    46789999999999999   899


Q ss_pred             ceeccCCCCCeeecC---CCCeEEeeccCceecCCCCcceeecccccCCCccCcccccccCCCcchhhHHHHHHHHHHHh
Q 044022           89 IVLRNFKTQNILFNE---ENVAKWFDFLLSISIPEGETHITTDRVIGTRGYSAPEYISICVLNEKSNVFSFGAFLFELLA  165 (241)
Q Consensus        89 ivh~dl~~~nil~~~---~~~~~l~df~~~~~~~~~~~~~~~~~~~~~~~~~aPE~~~~~~~~~~~Di~s~G~~~~~~~~  165 (241)
                      ++||||||+||+++.   ++.+||+|||++........   .....||+.|+|||++.+..++.++||||||+++|+|++
T Consensus       169 ivH~Dikp~NIll~~~~~~~~~kl~Dfg~a~~~~~~~~---~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~ell~  245 (349)
T 2w4o_A          169 IVHRDLKPENLLYATPAPDAPLKIADFGLSKIVEHQVL---MKTVCGTPGYCAPEILRGCAYGPEVDMWSVGIITYILLC  245 (349)
T ss_dssp             CCCCCCCGGGEEESSSSTTCCEEECCCC-------------------CGGGSCHHHHTTCCCCTHHHHHHHHHHHHHHHH
T ss_pred             eEecCCCcccEEEecCCCCCCEEEccCccccccCcccc---cccccCCCCccCHHHhcCCCCCcccchHHHHHHHHHHHh
Confidence            999999999999975   88999999999876543221   133468999999999998899999999999999999999


Q ss_pred             cCcccccccccCCCcccchHHHHHHHhhhcccCCCCCCccccCCCchhHHHHHHHHHHHHHHhccCCCCCCCCCCC
Q 044022          166 GRIHIWDLLKDTHDHGCFFNEYLKNYLEDKRFTGIPAPIIVQDIPCIEKEQQLHASAQLTLECVNNSPEDRPTMVD  241 (241)
Q Consensus       166 g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~cl~~~p~~Rpt~~e  241 (241)
                      |..||......        ........... .. ... ....        ..+..+.+|+.+||+.||++|||++|
T Consensus       246 g~~pf~~~~~~--------~~~~~~i~~~~-~~-~~~-~~~~--------~~~~~~~~li~~~L~~dP~~Rpt~~e  302 (349)
T 2w4o_A          246 GFEPFYDERGD--------QFMFRRILNCE-YY-FIS-PWWD--------EVSLNAKDLVRKLIVLDPKKRLTTFQ  302 (349)
T ss_dssp             SSCTTCCTTCH--------HHHHHHHHTTC-CC-CCT-TTTT--------TSCHHHHHHHHTTSCSSGGGSCCHHH
T ss_pred             CCCCCCCCccc--------HHHHHHHHhCC-Cc-cCC-chhh--------hCCHHHHHHHHHHccCChhhCcCHHH
Confidence            99999652111        11111111111 10 011 1111        22357889999999999999999753


No 112
>1xbb_A Tyrosine-protein kinase SYK; gleevec, STI-571, imatinib, spleen typrosine kinase, active conformation, structural genomics, structural genomix; HET: STI; 1.57A {Homo sapiens} SCOP: d.144.1.7 PDB: 1xba_A* 1xbc_A* 3fqe_A* 3fqh_A* 3fqs_A* 3emg_A* 3srv_A* 4dfl_A* 4dfn_A* 3vf8_A* 3vf9_A*
Probab=100.00  E-value=1.1e-39  Score=261.77  Aligned_cols=213  Identities=22%  Similarity=0.296  Sum_probs=162.2

Q ss_pred             cccccccc-cccHHHHHHHHHHHHhcCCCcccceeeeeeeCCcceEEEEecCCCCHHHhhcCCCc----hHHHHHHHHHH
Q 044022            2 KFYGHEYH-RHTYGSCINNITYAAQMSHNHILKRIGCCLQTPIPILVFQSVEYGTLRDCIFGAPL----PRLKIASDIVN   76 (241)
Q Consensus         2 K~~~~~~~-~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~~~~~~~lv~e~~~~~sL~~~l~~~~~----~~~~~~~~i~~   76 (241)
                      |++..... ....+++.+|++++++++||||+++++++ ..+..++||||+++++|.+++.....    ....++.+++.
T Consensus        50 K~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~-~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~i~~qi~~  128 (291)
T 1xbb_A           50 KILKNEANDPALKDELLAEANVMQQLDNPYIVRMIGIC-EAESWMLVMEMAELGPLNKYLQQNRHVKDKNIIELVHQVSM  128 (291)
T ss_dssp             EEEC-----CHHHHHHHHHHHHHHTCCCTTBCCEEEEE-ESSSEEEEEECCTTEEHHHHHHHCTTCCHHHHHHHHHHHHH
T ss_pred             EeecccccCHHHHHHHHHHHHHHHhCCCCCEEEEEEEE-CCCCcEEEEEeCCCCCHHHHHHhCcCCCHHHHHHHHHHHHH
Confidence            44443322 23367899999999999999999999999 66778999999999999999875432    46789999999


Q ss_pred             HhchhhcCCCCCceeccCCCCCeeecCCCCeEEeeccCceecCCCCcce-eecccccCCCccCcccccccCCCcchhhHH
Q 044022           77 SLAYLHFGFPRPIVLRNFKTQNILFNEENVAKWFDFLLSISIPEGETHI-TTDRVIGTRGYSAPEYISICVLNEKSNVFS  155 (241)
Q Consensus        77 ~l~~lh~~~~~~ivh~dl~~~nil~~~~~~~~l~df~~~~~~~~~~~~~-~~~~~~~~~~~~aPE~~~~~~~~~~~Di~s  155 (241)
                      ||.|||   +.+++|+||||+||+++.++.++|+|||.+.......... ......+++.|+|||.+.+..++.++||||
T Consensus       129 ~l~~LH---~~~i~H~dikp~Nil~~~~~~~kl~Dfg~~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~s  205 (291)
T 1xbb_A          129 GMKYLE---ESNFVHRDLAARNVLLVTQHYAKISDFGLSKALRADENYYKAQTHGKWPVKWYAPECINYYKFSSKSDVWS  205 (291)
T ss_dssp             HHHHHH---HTTEECSCCSGGGEEEEETTEEEECCCTTCEECCTTCSEEEC----CCCGGGCCHHHHHHCEEEHHHHHHH
T ss_pred             HHHHHH---hCCeEcCCCCcceEEEeCCCcEEEccCCcceeeccCCCcccccccCCCCceeeChHHhccCCCChhhhHHH
Confidence            999999   8999999999999999999999999999998765443221 122234568899999998888899999999


Q ss_pred             HHHHHHHHHh-cCcccccccccCCCcccchHHHHHHHhhhcccCCCCCCccccCCCchhHHHHHHHHHHHHHHhccCCCC
Q 044022          156 FGAFLFELLA-GRIHIWDLLKDTHDHGCFFNEYLKNYLEDKRFTGIPAPIIVQDIPCIEKEQQLHASAQLTLECVNNSPE  234 (241)
Q Consensus       156 ~G~~~~~~~~-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~cl~~~p~  234 (241)
                      ||+++|+|++ |..||.....         .+.... ...+....     ...        ..+..+.+++.+||+.||+
T Consensus       206 lG~il~~l~~~g~~p~~~~~~---------~~~~~~-~~~~~~~~-----~~~--------~~~~~l~~li~~~l~~dp~  262 (291)
T 1xbb_A          206 FGVLMWEAFSYGQKPYRGMKG---------SEVTAM-LEKGERMG-----CPA--------GCPREMYDLMNLCWTYDVE  262 (291)
T ss_dssp             HHHHHHHHHTTTCCSSTTCCH---------HHHHHH-HHTTCCCC-----CCT--------TCCHHHHHHHHHHTCSSTT
T ss_pred             HHHHHHHHHhcCCCCCCCCCH---------HHHHHH-HHcCCCCC-----CCC--------CCCHHHHHHHHHHcCCChh
Confidence            9999999999 9999965211         111111 11121111     111        1226789999999999999


Q ss_pred             CCCCCCC
Q 044022          235 DRPTMVD  241 (241)
Q Consensus       235 ~Rpt~~e  241 (241)
                      +|||+.|
T Consensus       263 ~Rps~~~  269 (291)
T 1xbb_A          263 NRPGFAA  269 (291)
T ss_dssp             TSCCHHH
T ss_pred             hCcCHHH
Confidence            9999753


No 113
>3dls_A PAS domain-containing serine/threonine-protein KI; PAS kinase, PASK, protein kinase, drug discovery, ATP-bindin kinase, nucleotide-binding; HET: ADP; 2.30A {Homo sapiens}
Probab=100.00  E-value=1.5e-39  Score=266.12  Aligned_cols=194  Identities=22%  Similarity=0.271  Sum_probs=159.1

Q ss_pred             cHHHHHHHHHHHHhcCCCcccceeeeeeeCCcceEEEEecCCC-CHHHhhcCCCc----hHHHHHHHHHHHhchhhcCCC
Q 044022           12 TYGSCINNITYAAQMSHNHILKRIGCCLQTPIPILVFQSVEYG-TLRDCIFGAPL----PRLKIASDIVNSLAYLHFGFP   86 (241)
Q Consensus        12 ~~~~~~~e~~~l~~l~h~~iv~~~~~~~~~~~~~lv~e~~~~~-sL~~~l~~~~~----~~~~~~~~i~~~l~~lh~~~~   86 (241)
                      ..+.+.+|++++++++||||+++++++...+..++||||+.+| +|.+++.....    .+..++.+++.||.|||   +
T Consensus        72 ~~~~~~~E~~~l~~l~h~~Iv~~~~~~~~~~~~~lv~e~~~~g~~l~~~~~~~~~l~~~~~~~i~~qi~~~L~~LH---~  148 (335)
T 3dls_A           72 KLGKVTLEIAILSRVEHANIIKVLDIFENQGFFQLVMEKHGSGLDLFAFIDRHPRLDEPLASYIFRQLVSAVGYLR---L  148 (335)
T ss_dssp             TTEEEEHHHHHHTTCCCTTBCCEEEEEECSSEEEEEEECCTTSCBHHHHHHTCCCCCHHHHHHHHHHHHHHHHHHH---H
T ss_pred             HHHHHHHHHHHHHhCCCCCEeeEEEEEeeCCEEEEEEEeCCCCccHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHH---h
Confidence            4456788999999999999999999999999999999998766 99999876532    46789999999999999   8


Q ss_pred             CCceeccCCCCCeeecCCCCeEEeeccCceecCCCCcceeecccccCCCccCcccccccCC-CcchhhHHHHHHHHHHHh
Q 044022           87 RPIVLRNFKTQNILFNEENVAKWFDFLLSISIPEGETHITTDRVIGTRGYSAPEYISICVL-NEKSNVFSFGAFLFELLA  165 (241)
Q Consensus        87 ~~ivh~dl~~~nil~~~~~~~~l~df~~~~~~~~~~~~~~~~~~~~~~~~~aPE~~~~~~~-~~~~Di~s~G~~~~~~~~  165 (241)
                      .+++||||||+|||++.++.+||+|||.+.........   ....||+.|+|||++.+..+ +.++||||||+++|+|++
T Consensus       149 ~~ivH~Dlkp~NIll~~~~~~kL~Dfg~a~~~~~~~~~---~~~~gt~~y~aPE~~~~~~~~~~~~DiwslG~il~el~~  225 (335)
T 3dls_A          149 KDIIHRDIKDENIVIAEDFTIKLIDFGSAAYLERGKLF---YTFCGTIEYCAPEVLMGNPYRGPELEMWSLGVTLYTLVF  225 (335)
T ss_dssp             TTEECSCCSGGGEEECTTSCEEECCCTTCEECCTTCCB---CEECSCGGGCCHHHHTTCCBCSHHHHHHHHHHHHHHHHH
T ss_pred             CCeEEeccCHHHEEEcCCCcEEEeecccceECCCCCce---eccCCCccccChhhhcCCCCCCCcccchhHHHHHHHHHh
Confidence            99999999999999999999999999999876554322   23468999999999988776 789999999999999999


Q ss_pred             cCcccccccccCCCcccchHHHHHHHhhhcccCCCCCCccccCCCchhHHHHHHHHHHHHHHhccCCCCCCCCCCC
Q 044022          166 GRIHIWDLLKDTHDHGCFFNEYLKNYLEDKRFTGIPAPIIVQDIPCIEKEQQLHASAQLTLECVNNSPEDRPTMVD  241 (241)
Q Consensus       166 g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~cl~~~p~~Rpt~~e  241 (241)
                      |..||.......                ..   ....   ..        ..+..+.+++.+||+.||++|||++|
T Consensus       226 g~~pf~~~~~~~----------------~~---~~~~---~~--------~~~~~l~~li~~~L~~dP~~Rps~~e  271 (335)
T 3dls_A          226 EENPFCELEETV----------------EA---AIHP---PY--------LVSKELMSLVSGLLQPVPERRTTLEK  271 (335)
T ss_dssp             SSCSCSSGGGGT----------------TT---CCCC---SS--------CCCHHHHHHHHHHTCSSGGGSCCHHH
T ss_pred             CCCchhhHHHHH----------------hh---ccCC---Cc--------ccCHHHHHHHHHHccCChhhCcCHHH
Confidence            999996521110                00   0000   00        11257899999999999999999853


No 114
>3dbq_A Dual specificity protein kinase TTK; MPS1 structure, kinase activation, phosphorylation, ATP- binding, nucleotide-binding, phosphoprotein; 2.70A {Homo sapiens}
Probab=100.00  E-value=1.9e-39  Score=266.33  Aligned_cols=205  Identities=18%  Similarity=0.295  Sum_probs=152.6

Q ss_pred             ccHHHHHHHHHHHHhcCC--CcccceeeeeeeCCcceEEEEecCCCCHHHhhcCCCc----hHHHHHHHHHHHhchhhcC
Q 044022           11 HTYGSCINNITYAAQMSH--NHILKRIGCCLQTPIPILVFQSVEYGTLRDCIFGAPL----PRLKIASDIVNSLAYLHFG   84 (241)
Q Consensus        11 ~~~~~~~~e~~~l~~l~h--~~iv~~~~~~~~~~~~~lv~e~~~~~sL~~~l~~~~~----~~~~~~~~i~~~l~~lh~~   84 (241)
                      ...+.+.+|+.++++++|  +||+++++++...+..++|||+ .+++|.+++.....    .+..++.+++.||.|||  
T Consensus        49 ~~~~~~~~E~~~l~~l~~~~~~iv~~~~~~~~~~~~~lv~e~-~~~~L~~~l~~~~~~~~~~~~~i~~qi~~al~~lH--  125 (343)
T 3dbq_A           49 QTLDSYRNEIAYLNKLQQHSDKIIRLYDYEITDQYIYMVMEC-GNIDLNSWLKKKKSIDPWERKSYWKNMLEAVHTIH--  125 (343)
T ss_dssp             HHHHHHHHHHHHHHHHTTTCTTBCCEEEEEECSSEEEEEECC-CSEEHHHHHHHSCCCCHHHHHHHHHHHHHHHHHHH--
T ss_pred             HHHHHHHHHHHHHHhhhhcCCceEEEeeeEeeCCEEEEEEeC-CCCCHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHH--
Confidence            455788999999999976  9999999999999999999995 57899999865432    56789999999999999  


Q ss_pred             CCCCceeccCCCCCeeecCCCCeEEeeccCceecCCCCcceeecccccCCCccCcccccc-----------cCCCcchhh
Q 044022           85 FPRPIVLRNFKTQNILFNEENVAKWFDFLLSISIPEGETHITTDRVIGTRGYSAPEYISI-----------CVLNEKSNV  153 (241)
Q Consensus        85 ~~~~ivh~dl~~~nil~~~~~~~~l~df~~~~~~~~~~~~~~~~~~~~~~~~~aPE~~~~-----------~~~~~~~Di  153 (241)
                       +.+++||||||+|||++ ++.+||+|||++................||+.|+|||++.+           ..++.++||
T Consensus       126 -~~~iiHrDikp~NIll~-~~~~kl~DFG~a~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~~~~~~~Di  203 (343)
T 3dbq_A          126 -QHGIVHSDLKPANFLIV-DGMLKLIDFGIANQMQPDTTSVVKDSQVGTVNYMPPEAIKDMSSSRENGKSKSKISPKSDV  203 (343)
T ss_dssp             -HTTCCCCCCCGGGEEEE-TTEEEECCCSSSCCC------------CCCCSSCCHHHHHHCC-----------CCHHHHH
T ss_pred             -hCCeecCCCCcceEEEE-CCcEEEeecccccccCcccccccCCCCcCCcCcCCHHHHhhccccccccccccCCCchhhH
Confidence             89999999999999997 67899999999987654433333345579999999999865           568889999


Q ss_pred             HHHHHHHHHHHhcCcccccccccCCCcccchHHHHHHHhhhcccCCCCCCccccCCCchhHHHHHHHHHHHHHHhccCCC
Q 044022          154 FSFGAFLFELLAGRIHIWDLLKDTHDHGCFFNEYLKNYLEDKRFTGIPAPIIVQDIPCIEKEQQLHASAQLTLECVNNSP  233 (241)
Q Consensus       154 ~s~G~~~~~~~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~cl~~~p  233 (241)
                      ||||+++|+|++|+.||.....       .. .............     ......        +..+.+++.+||+.||
T Consensus       204 wslG~il~ell~g~~pf~~~~~-------~~-~~~~~~~~~~~~~-----~~~~~~--------~~~l~~li~~~L~~dp  262 (343)
T 3dbq_A          204 WSLGCILYYMTYGKTPFQQIIN-------QI-SKLHAIIDPNHEI-----EFPDIP--------EKDLQDVLKCCLKRDP  262 (343)
T ss_dssp             HHHHHHHHHHHHSSCTTTTCCS-------HH-HHHHHHHCTTSCC-----CCCCCS--------CHHHHHHHHHHTCSST
T ss_pred             HHHHHHHHHHHhCCCcchhhhh-------HH-HHHHHHhcCCccc-----CCcccC--------CHHHHHHHHHHcCCCh
Confidence            9999999999999999964211       11 1111111111111     111111        1468899999999999


Q ss_pred             CCCCCCCC
Q 044022          234 EDRPTMVD  241 (241)
Q Consensus       234 ~~Rpt~~e  241 (241)
                      ++|||++|
T Consensus       263 ~~Rpt~~e  270 (343)
T 3dbq_A          263 KQRISIPE  270 (343)
T ss_dssp             TTSCCHHH
T ss_pred             hHCCCHHH
Confidence            99999853


No 115
>1fmk_A C-SRC, P60-SRC, tyrosine-protein kinase SRC; tyrosine kinase, phosphorylation, SH2, SH3, phosphotyrosine, proto-oncogene, phosphotransferase; HET: PTR; 1.50A {Homo sapiens} SCOP: b.34.2.1 d.93.1.1 d.144.1.7 PDB: 1y57_A* 2src_A* 1ksw_A* 2ptk_A* 1yol_A* 2oiq_A* 3d7t_B* 3dqx_A* 3el7_A* 3el8_A* 3en4_A* 3en5_A* 3en6_A* 3en7_A* 3f6x_A* 3g6g_A* 3uqf_A* 3uqg_A* 4agw_A* 3oez_A* ...
Probab=100.00  E-value=7.4e-40  Score=277.97  Aligned_cols=201  Identities=23%  Similarity=0.293  Sum_probs=154.9

Q ss_pred             cHHHHHHHHHHHHhcCCCcccceeeeeeeCCcceEEEEecCCCCHHHhhcCC-----C-chHHHHHHHHHHHhchhhcCC
Q 044022           12 TYGSCINNITYAAQMSHNHILKRIGCCLQTPIPILVFQSVEYGTLRDCIFGA-----P-LPRLKIASDIVNSLAYLHFGF   85 (241)
Q Consensus        12 ~~~~~~~e~~~l~~l~h~~iv~~~~~~~~~~~~~lv~e~~~~~sL~~~l~~~-----~-~~~~~~~~~i~~~l~~lh~~~   85 (241)
                      ..+.|.+|++++++++||||+++++++.. +..++||||+++|+|.+++...     . ...+.++.|++.||.|||   
T Consensus       222 ~~~~~~~E~~~l~~l~hp~iv~~~~~~~~-~~~~iv~e~~~~gsL~~~l~~~~~~~~~~~~~~~i~~qi~~~l~~LH---  297 (452)
T 1fmk_A          222 SPEAFLQEAQVMKKLRHEKLVQLYAVVSE-EPIYIVTEYMSKGSLLDFLKGETGKYLRLPQLVDMAAQIASGMAYVE---  297 (452)
T ss_dssp             CHHHHHHHHHHHHHCCCTTBCCEEEEECS-SSCEEEECCCTTCBHHHHHSHHHHTTCCHHHHHHHHHHHHHHHHHHH---
T ss_pred             CHHHHHHHHHHHHhCCCCCEeeEEEEEcC-CceEEEehhhcCCCHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHHH---
Confidence            46789999999999999999999999876 6789999999999999999742     1 246789999999999999   


Q ss_pred             CCCceeccCCCCCeeecCCCCeEEeeccCceecCCCCcceeecccccCCCccCcccccccCCCcchhhHHHHHHHHHHHh
Q 044022           86 PRPIVLRNFKTQNILFNEENVAKWFDFLLSISIPEGETHITTDRVIGTRGYSAPEYISICVLNEKSNVFSFGAFLFELLA  165 (241)
Q Consensus        86 ~~~ivh~dl~~~nil~~~~~~~~l~df~~~~~~~~~~~~~~~~~~~~~~~~~aPE~~~~~~~~~~~Di~s~G~~~~~~~~  165 (241)
                      +++++||||||+|||++.++.+||+|||++........ .......++..|+|||.+....++.++||||||+++|+|++
T Consensus       298 ~~~ivHrDlkp~Nill~~~~~~kl~DfG~a~~~~~~~~-~~~~~~~~~~~y~aPE~~~~~~~~~~sDvwslG~~l~el~t  376 (452)
T 1fmk_A          298 RMNYVHRDLRAANILVGENLVCKVADFGLARLIEDNEY-TARQGAKFPIKWTAPEAALYGRFTIKSDVWSFGILLTELTT  376 (452)
T ss_dssp             HTTCCCSCCSGGGEEECGGGCEEECCCCTTC---------------CCGGGSCHHHHHHCCCCHHHHHHHHHHHHHHHHT
T ss_pred             hCCeeCCCCChhhEEECCCCCEEECCCccceecCCCce-ecccCCcccccccCHhHHhcCCCCccccHHhHHHHHHHHHh
Confidence            89999999999999999999999999999976543221 11122346778999999998899999999999999999999


Q ss_pred             -cCcccccccccCCCcccchHHHHHHHhhhcccCCCCCCccccCCCchhHHHHHHHHHHHHHHhccCCCCCCCCCC
Q 044022          166 -GRIHIWDLLKDTHDHGCFFNEYLKNYLEDKRFTGIPAPIIVQDIPCIEKEQQLHASAQLTLECVNNSPEDRPTMV  240 (241)
Q Consensus       166 -g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~cl~~~p~~Rpt~~  240 (241)
                       |+.||....         ..+...... .+.....     ..        ..++.+.+++.+||+.||++|||++
T Consensus       377 ~g~~P~~~~~---------~~~~~~~i~-~~~~~~~-----~~--------~~~~~l~~li~~cl~~dP~~Rpt~~  429 (452)
T 1fmk_A          377 KGRVPYPGMV---------NREVLDQVE-RGYRMPC-----PP--------ECPESLHDLMCQCWRKEPEERPTFE  429 (452)
T ss_dssp             TTCCSSTTCC---------HHHHHHHHH-TTCCCCC-----CT--------TSCHHHHHHHHHHTCSSGGGSCCHH
T ss_pred             CCCCCCCCCC---------HHHHHHHHH-cCCCCCC-----CC--------CCCHHHHHHHHHHccCChhhCcCHH
Confidence             999995421         122222221 2211111     11        2236788999999999999999985


No 116
>3ork_A Serine/threonine protein kinase; structural genomics, TB structural genomics consortium, TBSG domain, signal transduction; HET: AGS; 1.60A {Mycobacterium tuberculosis} PDB: 3ori_A* 3orl_A* 3oro_A* 3orp_A* 3ort_A* 3f61_A* 1mru_A* 3f69_A* 3orm_A* 1o6y_A* 2fum_A*
Probab=100.00  E-value=1.3e-40  Score=269.71  Aligned_cols=217  Identities=22%  Similarity=0.288  Sum_probs=157.7

Q ss_pred             Ccccccccc--cccHHHHHHHHHHHHhcCCCcccceeeeeeeCCcc----eEEEEecCCCCHHHhhcCCC----chHHHH
Q 044022            1 MKFYGHEYH--RHTYGSCINNITYAAQMSHNHILKRIGCCLQTPIP----ILVFQSVEYGTLRDCIFGAP----LPRLKI   70 (241)
Q Consensus         1 iK~~~~~~~--~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~~~~~~----~lv~e~~~~~sL~~~l~~~~----~~~~~~   70 (241)
                      ||++..+..  ......+.+|++++++++||||+++++++......    ++||||+++++|.+++....    .....+
T Consensus        42 vK~~~~~~~~~~~~~~~~~~E~~~l~~l~hp~iv~~~~~~~~~~~~~~~~~lv~e~~~g~~L~~~l~~~~~~~~~~~~~~  121 (311)
T 3ork_A           42 VKVLRADLARDPSFYLRFRREAQNAAALNHPAIVAVYDTGEAETPAGPLPYIVMEYVDGVTLRDIVHTEGPMTPKRAIEV  121 (311)
T ss_dssp             EEEECTTTTTSHHHHHHHHHHHTTCCCCCCTTBCCEEEEEEEEETTEEEEEEEEECCCEEEHHHHHHHHCSCCHHHHHHH
T ss_pred             EEEeCccccCCHHHHHHHHHHHHHHHcCCCCCcceEEEeeeccCCCCcccEEEEecCCCCCHHHHHHhcCCCCHHHHHHH
Confidence            355544332  23456789999999999999999999999876544    99999999999999986432    246789


Q ss_pred             HHHHHHHhchhhcCCCCCceeccCCCCCeeecCCCCeEEeeccCceecCCCCcc-eeecccccCCCccCcccccccCCCc
Q 044022           71 ASDIVNSLAYLHFGFPRPIVLRNFKTQNILFNEENVAKWFDFLLSISIPEGETH-ITTDRVIGTRGYSAPEYISICVLNE  149 (241)
Q Consensus        71 ~~~i~~~l~~lh~~~~~~ivh~dl~~~nil~~~~~~~~l~df~~~~~~~~~~~~-~~~~~~~~~~~~~aPE~~~~~~~~~  149 (241)
                      +.|++.||.|||   +.+++||||||+||+++.++.+||+|||.+......... .......|++.|+|||++.+..++.
T Consensus       122 ~~qi~~~l~~lH---~~~ivH~dlkp~Nil~~~~~~~kl~Dfg~a~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~  198 (311)
T 3ork_A          122 IADACQALNFSH---QNGIIHRDVKPANIMISATNAVKVMDFGIARAIADSGNSVTQTAAVIGTAQYLSPEQARGDSVDA  198 (311)
T ss_dssp             HHHHHHHHHHHH---HTTCCCCCCCGGGEEEETTSCEEECCCSCC------------------CCTTCCHHHHHTCCCCH
T ss_pred             HHHHHHHHHHHH---HCCCCcCCCCHHHEEEcCCCCEEEeeccCcccccccccccccccccCcCcccCCHHHhcCCCCCc
Confidence            999999999999   899999999999999999999999999999765443211 1223356899999999999889999


Q ss_pred             chhhHHHHHHHHHHHhcCcccccccccCCCcccchHHHHHHHhhhcccCCCCCCccccCCCchhHHHHHHHHHHHHHHhc
Q 044022          150 KSNVFSFGAFLFELLAGRIHIWDLLKDTHDHGCFFNEYLKNYLEDKRFTGIPAPIIVQDIPCIEKEQQLHASAQLTLECV  229 (241)
Q Consensus       150 ~~Di~s~G~~~~~~~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~cl  229 (241)
                      ++||||||+++|+|++|+.||....         ..+..........   ........        ..+..+.+++.+||
T Consensus       199 ~~Di~slG~~l~~ll~g~~pf~~~~---------~~~~~~~~~~~~~---~~~~~~~~--------~~~~~l~~li~~~l  258 (311)
T 3ork_A          199 RSDVYSLGCVLYEVLTGEPPFTGDS---------PVSVAYQHVREDP---IPPSARHE--------GLSADLDAVVLKAL  258 (311)
T ss_dssp             HHHHHHHHHHHHHHHHSSCSCCCSS---------HHHHHHHHHHCCC---CCHHHHST--------TCCHHHHHHHHHHT
T ss_pred             hHhHHHHHHHHHHHHhCCCCCCCCC---------hHHHHHHHhcCCC---CCcccccC--------CCCHHHHHHHHHHH
Confidence            9999999999999999999995421         1111122111111   01000011        12367889999999


Q ss_pred             cCCCCCCCCCC
Q 044022          230 NNSPEDRPTMV  240 (241)
Q Consensus       230 ~~~p~~Rpt~~  240 (241)
                      +.||++||++.
T Consensus       259 ~~dP~~R~~~~  269 (311)
T 3ork_A          259 AKNPENRYQTA  269 (311)
T ss_dssp             CSSGGGSCSSH
T ss_pred             hcCHhhChhhH
Confidence            99999999874


No 117
>2eue_A Carbon catabolite derepressing protein kinase; kinase domain; 2.20A {Saccharomyces cerevisiae} PDB: 3fam_A 3hyh_A 3dae_A 2fh9_A 3mn3_A
Probab=100.00  E-value=3.4e-39  Score=256.80  Aligned_cols=200  Identities=24%  Similarity=0.310  Sum_probs=148.7

Q ss_pred             ccHHHHHHHHHHHHhcCCCcccceeeeeeeCCcceEEEEecCCCCHHHhhcCCCc----hHHHHHHHHHHHhchhhcCCC
Q 044022           11 HTYGSCINNITYAAQMSHNHILKRIGCCLQTPIPILVFQSVEYGTLRDCIFGAPL----PRLKIASDIVNSLAYLHFGFP   86 (241)
Q Consensus        11 ~~~~~~~~e~~~l~~l~h~~iv~~~~~~~~~~~~~lv~e~~~~~sL~~~l~~~~~----~~~~~~~~i~~~l~~lh~~~~   86 (241)
                      ...+.+.+|++++++++||||+++++++...+..++||||+ +++|.+++.....    ....++.+++.||.|||   +
T Consensus        55 ~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~~-~~~l~~~~~~~~~~~~~~~~~~~~~i~~~l~~LH---~  130 (275)
T 2eue_A           55 DMQGRIEREISYLRLLRHPHIIKLYDVIKSKDEIIMVIEYA-GNELFDYIVQRDKMSEQEARRFFQQIISAVEYCH---R  130 (275)
T ss_dssp             -CHHHHHHHHHHHHHCCCTTBCCEEEEEECSSCEEEEEECC-CEEHHHHHHTSSSCCHHHHHHHHHHHHHHHHHHH---H
T ss_pred             HHHHHHHHHHHHHHhCCCCCeEEEEEEEecCCeEEEEehhc-CCcHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHH---H
Confidence            45678899999999999999999999999999999999999 5788887755422    46789999999999999   8


Q ss_pred             CCceeccCCCCCeeecCCCCeEEeeccCceecCCCCcceeecccccCCCccCcccccccCC-CcchhhHHHHHHHHHHHh
Q 044022           87 RPIVLRNFKTQNILFNEENVAKWFDFLLSISIPEGETHITTDRVIGTRGYSAPEYISICVL-NEKSNVFSFGAFLFELLA  165 (241)
Q Consensus        87 ~~ivh~dl~~~nil~~~~~~~~l~df~~~~~~~~~~~~~~~~~~~~~~~~~aPE~~~~~~~-~~~~Di~s~G~~~~~~~~  165 (241)
                      .+++|+||||+||+++.++.++|+|||.+.........   ....+++.|+|||.+.+..+ +.++||||||+++|+|++
T Consensus       131 ~~i~H~dikp~Nil~~~~~~~kl~Dfg~~~~~~~~~~~---~~~~~t~~y~aPE~~~~~~~~~~~~Di~slG~il~~l~~  207 (275)
T 2eue_A          131 HKIVHRDLKPENLLLDEHLNVKIADFGLSNIMTDGNFL---KTSCGSPNYAAPEVISGKLYAGPEVDVWSCGVILYVMLC  207 (275)
T ss_dssp             TTCCCCCCSGGGEEECTTSCEEECCSSCC------------------CTTCCHHHHCC-----THHHHHHHHHHHHHHHH
T ss_pred             CCCeeccCChHhEEECCCCCEEEeecccceeccCcccc---cCCCCCcCcCCceeeeCCCCCCcccchHHHHHHHHHHHh
Confidence            99999999999999999999999999998765443221   23468899999999987765 689999999999999999


Q ss_pred             cCcccccccccCCCcccchHHHHHHHhhhcccCCCCCCccccCCCchhHHHHHHHHHHHHHHhccCCCCCCCCCCC
Q 044022          166 GRIHIWDLLKDTHDHGCFFNEYLKNYLEDKRFTGIPAPIIVQDIPCIEKEQQLHASAQLTLECVNNSPEDRPTMVD  241 (241)
Q Consensus       166 g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~cl~~~p~~Rpt~~e  241 (241)
                      |+.||...         ........... +.. ..     ..        ..+..+.+++.+||+.||++|||++|
T Consensus       208 g~~pf~~~---------~~~~~~~~~~~-~~~-~~-----~~--------~~~~~~~~li~~~l~~dP~~Rps~~e  259 (275)
T 2eue_A          208 RRLPFDDE---------SIPVLFKNISN-GVY-TL-----PK--------FLSPGAAGLIKRMLIVNPLNRISIHE  259 (275)
T ss_dssp             SSCSSCCS---------SHHHHHHHHHH-TCC-CC-----CT--------TSCHHHHHHHHHHSCSSGGGSCCHHH
T ss_pred             CCCCCCCC---------CHHHHHHHHHh-CCC-CC-----Cc--------cCCHHHHHHHHHHhhcCHhHCCCHHH
Confidence            99999542         11222222211 111 11     11        12256889999999999999999854


No 118
>3gen_A Tyrosine-protein kinase BTK; bruton'S tyrosine kinase, 4-amino-5-(4-phenoxyphenyl)-5H- pyrrolo[3, 2-D]pyrimidin-7-YL-cyclopentane, TEC-family; HET: B43; 1.60A {Homo sapiens} PDB: 3k54_A* 3pj2_A* 3piy_A* 3piz_A* 3pj1_A* 3pix_A* 3pj3_A* 3p08_A 3ocs_A* 3oct_A* 1k2p_A
Probab=100.00  E-value=1.9e-39  Score=259.25  Aligned_cols=203  Identities=18%  Similarity=0.305  Sum_probs=160.7

Q ss_pred             cHHHHHHHHHHHHhcCCCcccceeeeeeeCCcceEEEEecCCCCHHHhhcCC--C---chHHHHHHHHHHHhchhhcCCC
Q 044022           12 TYGSCINNITYAAQMSHNHILKRIGCCLQTPIPILVFQSVEYGTLRDCIFGA--P---LPRLKIASDIVNSLAYLHFGFP   86 (241)
Q Consensus        12 ~~~~~~~e~~~l~~l~h~~iv~~~~~~~~~~~~~lv~e~~~~~sL~~~l~~~--~---~~~~~~~~~i~~~l~~lh~~~~   86 (241)
                      ..+++.+|++++++++||||+++++++...+..++||||+++++|.+++...  .   .....++.+++.||.|||   +
T Consensus        62 ~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~i~~qi~~~l~~lH---~  138 (283)
T 3gen_A           62 SEDEFIEEAKVMMNLSHEKLVQLYGVCTKQRPIFIITEYMANGCLLNYLREMRHRFQTQQLLEMCKDVCEAMEYLE---S  138 (283)
T ss_dssp             CHHHHHHHHHHHHTCCCTTBCCEEEEECSSSSEEEEECCCTTCBHHHHHHCGGGCCCHHHHHHHHHHHHHHHHHHH---H
T ss_pred             CHHHHHHHHHHHhcCCCCCEeeEEEEEecCCCeEEEEeccCCCcHHHHHHHhccCCCHHHHHHHHHHHHHHHHHHH---H
Confidence            4577999999999999999999999999999999999999999999998662  1   256789999999999999   8


Q ss_pred             CCceeccCCCCCeeecCCCCeEEeeccCceecCCCCcceeecccccCCCccCcccccccCCCcchhhHHHHHHHHHHHh-
Q 044022           87 RPIVLRNFKTQNILFNEENVAKWFDFLLSISIPEGETHITTDRVIGTRGYSAPEYISICVLNEKSNVFSFGAFLFELLA-  165 (241)
Q Consensus        87 ~~ivh~dl~~~nil~~~~~~~~l~df~~~~~~~~~~~~~~~~~~~~~~~~~aPE~~~~~~~~~~~Di~s~G~~~~~~~~-  165 (241)
                      .+++|+||||+||+++.++.++|+|||.+......... ......+++.|+|||.+.+..++.++||||||+++|+|++ 
T Consensus       139 ~~i~H~dikp~Nili~~~~~~kl~Dfg~~~~~~~~~~~-~~~~~~~~~~y~aPE~~~~~~~~~~~Dv~slG~~l~~l~t~  217 (283)
T 3gen_A          139 KQFLHRDLAARNCLVNDQGVVKVSDFGLSRYVLDDEYT-SSVGSKFPVRWSPPEVLMYSKFSSKSDIWAFGVLMWEIYSL  217 (283)
T ss_dssp             TTCCCSSCSGGGEEECTTSCEEECSTTGGGGBCCHHHH-STTSTTSCGGGCCHHHHHHCCCSHHHHHHHHHHHHHHHHTT
T ss_pred             CCccCCCCccceEEEcCCCCEEEccccccccccccccc-cccCCccCcccCCHHHhccCCCCchhhHHHHHHHHHHHHhC
Confidence            99999999999999999999999999998765432111 1122345678999999998899999999999999999998 


Q ss_pred             cCcccccccccCCCcccchHHHHHHHhhhcccCCCCCCccccCCCchhHHHHHHHHHHHHHHhccCCCCCCCCCCC
Q 044022          166 GRIHIWDLLKDTHDHGCFFNEYLKNYLEDKRFTGIPAPIIVQDIPCIEKEQQLHASAQLTLECVNNSPEDRPTMVD  241 (241)
Q Consensus       166 g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~cl~~~p~~Rpt~~e  241 (241)
                      |+.||....         ..+....... ....  ..   ..        ..++.+.+++.+||+.||++|||++|
T Consensus       218 g~~p~~~~~---------~~~~~~~~~~-~~~~--~~---~~--------~~~~~l~~li~~~l~~~p~~Rps~~~  270 (283)
T 3gen_A          218 GKMPYERFT---------NSETAEHIAQ-GLRL--YR---PH--------LASEKVYTIMYSCWHEKADERPTFKI  270 (283)
T ss_dssp             TCCTTTTSC---------HHHHHHHHHT-TCCC--CC---CT--------TCCHHHHHHHHHTTCSSGGGSCCHHH
T ss_pred             CCCCccccC---------hhHHHHHHhc-ccCC--CC---CC--------cCCHHHHHHHHHHccCChhHCcCHHH
Confidence            999996521         1112222111 1100  01   11        11257889999999999999999753


No 119
>2yfx_A Tyrosine-protein kinase receptor; nucleotide-binding, transferase; HET: VGH; 1.70A {Homo sapiens} PDB: 2xp2_A* 3aox_A* 2yhv_A 3lcs_A* 3lct_A* 4dce_A* 2xba_A* 2xb7_A*
Probab=100.00  E-value=1.1e-39  Score=266.04  Aligned_cols=215  Identities=20%  Similarity=0.256  Sum_probs=164.2

Q ss_pred             CcccccccccccHHHHHHHHHHHHhcCCCcccceeeeeeeCCcceEEEEecCCCCHHHhhcCCC--------c---hHHH
Q 044022            1 MKFYGHEYHRHTYGSCINNITYAAQMSHNHILKRIGCCLQTPIPILVFQSVEYGTLRDCIFGAP--------L---PRLK   69 (241)
Q Consensus         1 iK~~~~~~~~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~~~~~~~lv~e~~~~~sL~~~l~~~~--------~---~~~~   69 (241)
                      ||.+..........++.+|+.++++++||||+++++++...+..++||||+++++|.+++....        .   ..+.
T Consensus        65 vK~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~  144 (327)
T 2yfx_A           65 VKTLPEVCSEQDELDFLMEALIISKFNHQNIVRCIGVSLQSLPRFILMELMAGGDLKSFLRETRPRPSQPSSLAMLDLLH  144 (327)
T ss_dssp             EEECCSSCCHHHHHHHHHHHHHHHHCCCTTBCCEEEEECSSSSCEEEEECCTTEEHHHHHHHTSCCSSSTTSCCHHHHHH
T ss_pred             EEEeccccchhhHHHHHHHHHHHhhCCCCCCCeEEEEEcCCCCcEEEEecCCCCcHHHHHHhhcccccccccccHHHHHH
Confidence            3555444444566789999999999999999999999999999999999999999999986542        1   3678


Q ss_pred             HHHHHHHHhchhhcCCCCCceeccCCCCCeeecC---CCCeEEeeccCceecCCCCcceeecccccCCCccCcccccccC
Q 044022           70 IASDIVNSLAYLHFGFPRPIVLRNFKTQNILFNE---ENVAKWFDFLLSISIPEGETHITTDRVIGTRGYSAPEYISICV  146 (241)
Q Consensus        70 ~~~~i~~~l~~lh~~~~~~ivh~dl~~~nil~~~---~~~~~l~df~~~~~~~~~~~~~~~~~~~~~~~~~aPE~~~~~~  146 (241)
                      ++.+++.||.|||   +.+++||||||+||+++.   ...++|+|||.+................+++.|+|||.+.+..
T Consensus       145 i~~qi~~al~~LH---~~~i~H~dlkp~NIli~~~~~~~~~kl~Dfg~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~  221 (327)
T 2yfx_A          145 VARDIACGCQYLE---ENHFIHRDIAARNCLLTCPGPGRVAKIGDFGMARDIYRASYYRKGGCAMLPVKWMPPEAFMEGI  221 (327)
T ss_dssp             HHHHHHHHHHHHH---HTTCCCSCCCGGGEEESCSSTTCCEEECCCHHHHHHHC------CCGGGSCGGGCCHHHHHHCC
T ss_pred             HHHHHHHHHHHHh---hCCeecCcCCHhHEEEecCCCcceEEECccccccccccccccccCCCcCCCcceeCHhHhcCCC
Confidence            9999999999999   899999999999999984   4569999999987543332222223456788999999998889


Q ss_pred             CCcchhhHHHHHHHHHHHh-cCcccccccccCCCcccchHHHHHHHhhhcccCCCCCCccccCCCchhHHHHHHHHHHHH
Q 044022          147 LNEKSNVFSFGAFLFELLA-GRIHIWDLLKDTHDHGCFFNEYLKNYLEDKRFTGIPAPIIVQDIPCIEKEQQLHASAQLT  225 (241)
Q Consensus       147 ~~~~~Di~s~G~~~~~~~~-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~  225 (241)
                      ++.++||||||+++|+|++ |..||....         ..+......... ...     ...        ..+..+.+++
T Consensus       222 ~~~~~Di~slG~il~ellt~g~~p~~~~~---------~~~~~~~~~~~~-~~~-----~~~--------~~~~~l~~li  278 (327)
T 2yfx_A          222 FTSKTDTWSFGVLLWEIFSLGYMPYPSKS---------NQEVLEFVTSGG-RMD-----PPK--------NCPGPVYRIM  278 (327)
T ss_dssp             CCHHHHHHHHHHHHHHHHTTSCCSSTTCC---------HHHHHHHHHTTC-CCC-----CCT--------TCCHHHHHHH
T ss_pred             CCchhhHHHHHHHHHHHHcCCCCCCCCcC---------HHHHHHHHhcCC-CCC-----CCC--------CCCHHHHHHH
Confidence            9999999999999999998 999985421         112222221111 111     111        1225788999


Q ss_pred             HHhccCCCCCCCCCCC
Q 044022          226 LECVNNSPEDRPTMVD  241 (241)
Q Consensus       226 ~~cl~~~p~~Rpt~~e  241 (241)
                      .+||+.||++|||++|
T Consensus       279 ~~~l~~dp~~Rps~~~  294 (327)
T 2yfx_A          279 TQCWQHQPEDRPNFAI  294 (327)
T ss_dssp             HHHTCSSGGGSCCHHH
T ss_pred             HHHhcCChhhCcCHHH
Confidence            9999999999999753


No 120
>3f3z_A Calcium/calmodulin-dependent protein kinase with domain and 4 calmodulin like EF...; calcium dependent protein kinase; HET: SEP DRK; 1.84A {Cryptosporidium parvum iowa II} PDB: 2qg5_A*
Probab=100.00  E-value=2.3e-39  Score=257.96  Aligned_cols=203  Identities=20%  Similarity=0.276  Sum_probs=160.7

Q ss_pred             ccHHHHHHHHHHHHhcCCCcccceeeeeeeCCcceEEEEecCCCCHHHhhcCCC----chHHHHHHHHHHHhchhhcCCC
Q 044022           11 HTYGSCINNITYAAQMSHNHILKRIGCCLQTPIPILVFQSVEYGTLRDCIFGAP----LPRLKIASDIVNSLAYLHFGFP   86 (241)
Q Consensus        11 ~~~~~~~~e~~~l~~l~h~~iv~~~~~~~~~~~~~lv~e~~~~~sL~~~l~~~~----~~~~~~~~~i~~~l~~lh~~~~   86 (241)
                      ...+.+.+|++++++++||||+++++++...+..++||||+++++|.+++....    .....++.+++.||.|||   +
T Consensus        48 ~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~~~~~~L~~~~~~~~~~~~~~~~~i~~~i~~~l~~lH---~  124 (277)
T 3f3z_A           48 EDVDRFKQEIEIMKSLDHPNIIRLYETFEDNTDIYLVMELCTGGELFERVVHKRVFRESDAARIMKDVLSAVAYCH---K  124 (277)
T ss_dssp             SCHHHHHHHHHHHHTCCCTTBCCEEEEEECSSEEEEEEECCCSCBHHHHHHHHCSCCHHHHHHHHHHHHHHHHHHH---H
T ss_pred             chHHHHHHHHHHHHhCCCCCEeeEEEEEecCCeEEEEEeccCCCcHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHH---H
Confidence            456789999999999999999999999999999999999999999999875432    256789999999999999   8


Q ss_pred             CCceeccCCCCCeee---cCCCCeEEeeccCceecCCCCcceeecccccCCCccCcccccccCCCcchhhHHHHHHHHHH
Q 044022           87 RPIVLRNFKTQNILF---NEENVAKWFDFLLSISIPEGETHITTDRVIGTRGYSAPEYISICVLNEKSNVFSFGAFLFEL  163 (241)
Q Consensus        87 ~~ivh~dl~~~nil~---~~~~~~~l~df~~~~~~~~~~~~~~~~~~~~~~~~~aPE~~~~~~~~~~~Di~s~G~~~~~~  163 (241)
                      .+++|+||||+||++   +.++.++|+|||.+.........   ....+++.|+|||.+.+ .++.++||||||+++|+|
T Consensus       125 ~~i~H~dlkp~Nil~~~~~~~~~~~l~Dfg~~~~~~~~~~~---~~~~~t~~y~aPE~~~~-~~~~~~Di~slG~~l~~l  200 (277)
T 3f3z_A          125 LNVAHRDLKPENFLFLTDSPDSPLKLIDFGLAARFKPGKMM---RTKVGTPYYVSPQVLEG-LYGPECDEWSAGVMMYVL  200 (277)
T ss_dssp             TTEECCCCSGGGEEESSSSTTCCEEECCCTTCEECCTTSCB---CCCCSCTTTCCHHHHTT-CBCTTHHHHHHHHHHHHH
T ss_pred             CCccCCCCCHHHEEEecCCCCCcEEEEecccceeccCccch---hccCCCCCccChHHhcc-cCCchhhehhHHHHHHHH
Confidence            999999999999999   78899999999999876543322   33468999999999875 489999999999999999


Q ss_pred             HhcCcccccccccCCCcccchHHHHHHHhhhcccCCCCCCccccCCCchhHHHHHHHHHHHHHHhccCCCCCCCCCC
Q 044022          164 LAGRIHIWDLLKDTHDHGCFFNEYLKNYLEDKRFTGIPAPIIVQDIPCIEKEQQLHASAQLTLECVNNSPEDRPTMV  240 (241)
Q Consensus       164 ~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~cl~~~p~~Rpt~~  240 (241)
                      ++|+.||....         ..+....... +.. ..+.         ......++.+.+++.+||+.||++|||+.
T Consensus       201 ~~g~~p~~~~~---------~~~~~~~~~~-~~~-~~~~---------~~~~~~~~~~~~li~~~l~~dp~~R~s~~  257 (277)
T 3f3z_A          201 LCGYPPFSAPT---------DSEVMLKIRE-GTF-TFPE---------KDWLNVSPQAESLIRRLLTKSPKQRITSL  257 (277)
T ss_dssp             HHSSCSSCCSS---------HHHHHHHHHH-CCC-CCCH---------HHHTTSCHHHHHHHHHHTCSSTTTSCCHH
T ss_pred             HHCCCCCCCCC---------HHHHHHHHHh-CCC-CCCc---------hhhhcCCHHHHHHHHHHccCChhhCcCHH
Confidence            99999995521         1111222111 111 0000         00012236789999999999999999975


No 121
>3pls_A Macrophage-stimulating protein receptor; protein kinase, CIS autophosphorylation conformation, recept tyrosine kinase, AMP-PNP, unphosphorylated; HET: ANP; 2.24A {Homo sapiens} SCOP: d.144.1.7
Probab=100.00  E-value=1.7e-39  Score=261.13  Aligned_cols=215  Identities=19%  Similarity=0.212  Sum_probs=162.0

Q ss_pred             cccccccccccHHHHHHHHHHHHhcCCCcccceeeeeeeCCcc-eEEEEecCCCCHHHhhcCCCc-----hHHHHHHHHH
Q 044022            2 KFYGHEYHRHTYGSCINNITYAAQMSHNHILKRIGCCLQTPIP-ILVFQSVEYGTLRDCIFGAPL-----PRLKIASDIV   75 (241)
Q Consensus         2 K~~~~~~~~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~~~~~~-~lv~e~~~~~sL~~~l~~~~~-----~~~~~~~~i~   75 (241)
                      |.+.........+.+.+|++++++++||||+++++++...+.. ++|+||+.+++|.+++.....     ....++.+++
T Consensus        55 K~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~~~v~e~~~~~~L~~~~~~~~~~~~~~~~~~i~~qi~  134 (298)
T 3pls_A           55 KSLSRITEMQQVEAFLREGLLMRGLNHPNVLALIGIMLPPEGLPHVLLPYMCHGDLLQFIRSPQRNPTVKDLISFGLQVA  134 (298)
T ss_dssp             EEETTCCSHHHHHHHHHHHHHHHTCCCTTBCCCCEEECCSSSCCEEEECCCTTCBHHHHHHCTTCCCBHHHHHHHHHHHH
T ss_pred             eeccccccHHHHHHHHHHHHHHHhCCCCCeeeEEEEEecCCCCcEEEEecccCCCHHHHHhccccCCCHHHHHHHHHHHH
Confidence            4444433444567899999999999999999999999866654 999999999999999976321     4678999999


Q ss_pred             HHhchhhcCCCCCceeccCCCCCeeecCCCCeEEeeccCceecCCCCc--ceeecccccCCCccCcccccccCCCcchhh
Q 044022           76 NSLAYLHFGFPRPIVLRNFKTQNILFNEENVAKWFDFLLSISIPEGET--HITTDRVIGTRGYSAPEYISICVLNEKSNV  153 (241)
Q Consensus        76 ~~l~~lh~~~~~~ivh~dl~~~nil~~~~~~~~l~df~~~~~~~~~~~--~~~~~~~~~~~~~~aPE~~~~~~~~~~~Di  153 (241)
                      .||.|||   +.+++||||||+||+++.++.++|+|||.+........  ........+++.|+|||.+.+..++.++||
T Consensus       135 ~~l~~LH---~~~i~H~dikp~Nili~~~~~~kl~Dfg~~~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di  211 (298)
T 3pls_A          135 RGMEYLA---EQKFVHRDLAARNCMLDESFTVKVADFGLARDILDREYYSVQQHRHARLPVKWTALESLQTYRFTTKSDV  211 (298)
T ss_dssp             HHHHHHH---HTTCCCSCCSGGGEEECTTCCEEECCTTSSCTTTTGGGGCSCCSSCTTCGGGGSCHHHHTTCCCCHHHHH
T ss_pred             HHHHHHH---hCCcccCCCCcceEEEcCCCcEEeCcCCCcccccCCcccccccCcCCCCCccccChhhhccCCCChhhch
Confidence            9999999   89999999999999999999999999999975543221  112233457788999999999899999999


Q ss_pred             HHHHHHHHHHHhcCcccccccccCCCcccchHHHHHHHhhhcccCCCCCCccccCCCchhHHHHHHHHHHHHHHhccCCC
Q 044022          154 FSFGAFLFELLAGRIHIWDLLKDTHDHGCFFNEYLKNYLEDKRFTGIPAPIIVQDIPCIEKEQQLHASAQLTLECVNNSP  233 (241)
Q Consensus       154 ~s~G~~~~~~~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~cl~~~p  233 (241)
                      ||||+++|+|++|..|+......        .+.... .........     ..        ..+..+.+++.+||+.||
T Consensus       212 ~slG~il~~l~~g~~~~~~~~~~--------~~~~~~-~~~~~~~~~-----~~--------~~~~~l~~li~~~l~~~p  269 (298)
T 3pls_A          212 WSFGVLLWELLTRGAPPYRHIDP--------FDLTHF-LAQGRRLPQ-----PE--------YCPDSLYQVMQQCWEADP  269 (298)
T ss_dssp             HHHHHHHHHHHHTSCCTTTTSCG--------GGHHHH-HHTTCCCCC-----CT--------TCCHHHHHHHHHHTCSSG
T ss_pred             hhHHHHHHHHhhCCCCCCccCCH--------HHHHHH-hhcCCCCCC-----Cc--------cchHHHHHHHHHHccCCh
Confidence            99999999999966554331111        111111 111111111     11        122578899999999999


Q ss_pred             CCCCCCCC
Q 044022          234 EDRPTMVD  241 (241)
Q Consensus       234 ~~Rpt~~e  241 (241)
                      ++|||++|
T Consensus       270 ~~Rps~~~  277 (298)
T 3pls_A          270 AVRPTFRV  277 (298)
T ss_dssp             GGSCCHHH
T ss_pred             hhCcCHHH
Confidence            99999753


No 122
>2zmd_A Dual specificity protein kinase TTK; MPS1, T686A, ATP-binding, nucleotide-bindi phosphoprotein, serine/threonine-protein kinase; HET: 537 7PE; 2.88A {Homo sapiens} PDB: 2zmc_A*
Probab=100.00  E-value=4.1e-39  Score=268.55  Aligned_cols=215  Identities=18%  Similarity=0.292  Sum_probs=157.9

Q ss_pred             Cccccccc-ccccHHHHHHHHHHHHhcC--CCcccceeeeeeeCCcceEEEEecCCCCHHHhhcCCCc----hHHHHHHH
Q 044022            1 MKFYGHEY-HRHTYGSCINNITYAAQMS--HNHILKRIGCCLQTPIPILVFQSVEYGTLRDCIFGAPL----PRLKIASD   73 (241)
Q Consensus         1 iK~~~~~~-~~~~~~~~~~e~~~l~~l~--h~~iv~~~~~~~~~~~~~lv~e~~~~~sL~~~l~~~~~----~~~~~~~~   73 (241)
                      ||++..+. .....+.+.+|++++++++  ||||+++++++...+..++||| +.+++|.+++.....    .+..++.|
T Consensus        85 iK~~~~~~~~~~~~~~~~~Ei~~l~~l~~~~~~iv~~~~~~~~~~~~~lv~E-~~~~~L~~~l~~~~~~~~~~~~~i~~q  163 (390)
T 2zmd_A           85 IKYVNLEEADNQTLDSYRNEIAYLNKLQQHSDKIIRLYDYEITDQYIYMVME-CGNIDLNSWLKKKKSIDPWERKSYWKN  163 (390)
T ss_dssp             EEEEECTTCCHHHHHHHHHHHHHHHHHTTTCTTBCCEEEEEECSSEEEEEEE-CCSEEHHHHHHHCSSCCHHHHHHHHHH
T ss_pred             EEEEecccccHHHHHHHHHHHHHHHHcccCCCeEEEEEEEEecCCEEEEEEe-cCCCCHHHHHHhcCCCCHHHHHHHHHH
Confidence            35544322 3345678999999999996  5999999999999999999999 557899999865432    46789999


Q ss_pred             HHHHhchhhcCCCCCceeccCCCCCeeecCCCCeEEeeccCceecCCCCcceeecccccCCCccCcccccc---------
Q 044022           74 IVNSLAYLHFGFPRPIVLRNFKTQNILFNEENVAKWFDFLLSISIPEGETHITTDRVIGTRGYSAPEYISI---------  144 (241)
Q Consensus        74 i~~~l~~lh~~~~~~ivh~dl~~~nil~~~~~~~~l~df~~~~~~~~~~~~~~~~~~~~~~~~~aPE~~~~---------  144 (241)
                      |+.||.|||   +.+|+||||||+|||++ ++.+||+|||++................||+.|+|||++.+         
T Consensus       164 i~~aL~~lH---~~~ivHrDlkp~NIll~-~~~~kl~DFG~a~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~  239 (390)
T 2zmd_A          164 MLEAVHTIH---QHGIVHSDLKPANFLIV-DGMLKLIDFGIANQMQPDTTSVVKDSQVGAVNYMPPEAIKDMSSSRENGK  239 (390)
T ss_dssp             HHHHHHHHH---TTTCCCCCCCGGGEEES-SSCEEECCCSSSCCC---------CCSCCCGGGCCHHHHHCC--------
T ss_pred             HHHHHHHHH---HCCeeecCCCHHHEEEE-CCeEEEEecCccccccCCCccccCCCCCcCCCccChHHhhhccccccccc
Confidence            999999999   99999999999999995 58999999999986654433222345579999999999865         


Q ss_pred             --cCCCcchhhHHHHHHHHHHHhcCcccccccccCCCcccchHHHHHHHhhhcccCCCCCCccccCCCchhHHHHHHHHH
Q 044022          145 --CVLNEKSNVFSFGAFLFELLAGRIHIWDLLKDTHDHGCFFNEYLKNYLEDKRFTGIPAPIIVQDIPCIEKEQQLHASA  222 (241)
Q Consensus       145 --~~~~~~~Di~s~G~~~~~~~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  222 (241)
                        ..++.++||||||+++|+|++|+.||.....        .................     ...        .+..+.
T Consensus       240 ~~~~~~~~~DiwSlGvil~ell~G~~Pf~~~~~--------~~~~~~~~~~~~~~~~~-----~~~--------~~~~~~  298 (390)
T 2zmd_A          240 SKSKISPKSDVWSLGCILYYMTYGKTPFQQIIN--------QISKLHAIIDPNHEIEF-----PDI--------PEKDLQ  298 (390)
T ss_dssp             ----CCHHHHHHHHHHHHHHHHHSSCTTTTCCC--------HHHHHHHHHCTTSCCCC-----CCC--------SCHHHH
T ss_pred             cccCCCChhhHHHHHHHHHHHHHCCCcchhhhH--------HHHHHHHHhCccccCCC-----Ccc--------chHHHH
Confidence              3688899999999999999999999964211        11111111111111111     111        125688


Q ss_pred             HHHHHhccCCCCCCCCCCC
Q 044022          223 QLTLECVNNSPEDRPTMVD  241 (241)
Q Consensus       223 ~l~~~cl~~~p~~Rpt~~e  241 (241)
                      +|+.+||+.||++|||++|
T Consensus       299 ~li~~~L~~dP~~Rps~~e  317 (390)
T 2zmd_A          299 DVLKCCLKRDPKQRISIPE  317 (390)
T ss_dssp             HHHHHHTCSSTTTSCCHHH
T ss_pred             HHHHHHcccChhhCCCHHH
Confidence            9999999999999999753


No 123
>3ttj_A Mitogen-activated protein kinase 10; JNK3, protein kinase in transferase-transferase inhibitor complex; HET: JBI; 2.10A {Homo sapiens} PDB: 3tti_A* 1jnk_A*
Probab=100.00  E-value=3.7e-39  Score=274.26  Aligned_cols=165  Identities=18%  Similarity=0.214  Sum_probs=132.0

Q ss_pred             Cccccccc-ccccHHHHHHHHHHHHhcCCCcccceeeeeeeCC------cceEEEEecCCCCHHHhhcCCCc--hHHHHH
Q 044022            1 MKFYGHEY-HRHTYGSCINNITYAAQMSHNHILKRIGCCLQTP------IPILVFQSVEYGTLRDCIFGAPL--PRLKIA   71 (241)
Q Consensus         1 iK~~~~~~-~~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~~~~------~~~lv~e~~~~~sL~~~l~~~~~--~~~~~~   71 (241)
                      ||++.... .....+++.+|+.+++.++||||+++++++...+      ..++||||+.+ +|.+.+.....  ....++
T Consensus        92 iK~~~~~~~~~~~~~~~~~E~~~l~~l~hpnIv~l~~~~~~~~~~~~~~~~~lv~E~~~~-~l~~~~~~~l~~~~~~~~~  170 (464)
T 3ttj_A           92 IKKLSRPFQNQTHAKRAYRELVLMKCVNHKNIISLLNVFTPQKTLEEFQDVYLVMELMDA-NLCQVIQMELDHERMSYLL  170 (464)
T ss_dssp             EEEEESGGGSHHHHHHHHHHHHHHHHCCCTTBCCCSEEECSCCSTTTCCEEEEEEECCSE-EHHHHHTSCCCHHHHHHHH
T ss_pred             EEEECccccChHHHHHHHHHHHHHHhCCCCCCCcEEEEEccCCccccCCeEEEEEeCCCC-CHHHHHhhcCCHHHHHHHH
Confidence            35444332 2345677899999999999999999999997554      46999999975 57666654322  467799


Q ss_pred             HHHHHHhchhhcCCCCCceeccCCCCCeeecCCCCeEEeeccCceecCCCCcceeecccccCCCccCcccccccCCCcch
Q 044022           72 SDIVNSLAYLHFGFPRPIVLRNFKTQNILFNEENVAKWFDFLLSISIPEGETHITTDRVIGTRGYSAPEYISICVLNEKS  151 (241)
Q Consensus        72 ~~i~~~l~~lh~~~~~~ivh~dl~~~nil~~~~~~~~l~df~~~~~~~~~~~~~~~~~~~~~~~~~aPE~~~~~~~~~~~  151 (241)
                      .|++.||.|||   +.+|+||||||+|||++.++.+||+|||++........   .....||+.|+|||++.+..++.++
T Consensus       171 ~qil~aL~~lH---~~~iiHrDlkp~NIll~~~~~~kl~DFG~a~~~~~~~~---~~~~~gt~~y~aPE~~~~~~~~~~~  244 (464)
T 3ttj_A          171 YQMLCGIKHLH---SAGIIHRDLKPSNIVVKSDCTLKILDFGLARTAGTSFM---MTPYVVTRYYRAPEVILGMGYKENV  244 (464)
T ss_dssp             HHHHHHHHHHH---HTTCCCCCCCGGGEEECTTSCEEECCCCCC-----CCC---C----CCCTTCCHHHHTTCCCCTTH
T ss_pred             HHHHHHHHHHH---HCCcccCCCChHhEEEeCCCCEEEEEEEeeeecCCCcc---cCCCcccccccCHHHHcCCCCCHHH
Confidence            99999999999   89999999999999999999999999999976544321   2335789999999999999999999


Q ss_pred             hhHHHHHHHHHHHhcCccccc
Q 044022          152 NVFSFGAFLFELLAGRIHIWD  172 (241)
Q Consensus       152 Di~s~G~~~~~~~~g~~p~~~  172 (241)
                      |||||||++|+|++|+.||..
T Consensus       245 DiwSlG~il~ell~g~~pF~g  265 (464)
T 3ttj_A          245 DIWSVGCIMGEMVRHKILFPG  265 (464)
T ss_dssp             HHHHHHHHHHHHHHSSCSSCC
T ss_pred             HHHHHHHHHHHHHhCCCCCCC
Confidence            999999999999999999954


No 124
>3c4z_A Rhodopsin kinase; Ser/Thr kinase, RGS homology domain, G protein coupled recep kinase, GRK, GRK1, P-loop, autophosphoryl ADP, ATP-binding; HET: ADP; 1.84A {Bos taurus} PDB: 3c4x_A* 3c4y_A 3c4w_A* 3c50_A* 3c51_A* 3qc9_A* 2i94_B
Probab=100.00  E-value=1.2e-38  Score=274.48  Aligned_cols=205  Identities=21%  Similarity=0.292  Sum_probs=163.9

Q ss_pred             ccHHHHHHHHHHHHhcCCCcccceeeeeeeCCcceEEEEecCCCCHHHhhcCCC-----c---hHHHHHHHHHHHhchhh
Q 044022           11 HTYGSCINNITYAAQMSHNHILKRIGCCLQTPIPILVFQSVEYGTLRDCIFGAP-----L---PRLKIASDIVNSLAYLH   82 (241)
Q Consensus        11 ~~~~~~~~e~~~l~~l~h~~iv~~~~~~~~~~~~~lv~e~~~~~sL~~~l~~~~-----~---~~~~~~~~i~~~l~~lh   82 (241)
                      .....+.+|++++++++||||+++++++......|+||||++||+|.+++....     .   ....++.||+.||.|||
T Consensus       227 ~~~~~~~~E~~iL~~l~hp~Iv~l~~~~~~~~~l~lVmE~~~gg~L~~~l~~~~~~~~~l~e~~~~~~~~qi~~aL~~LH  306 (543)
T 3c4z_A          227 KGYQGAMVEKKILAKVHSRFIVSLAYAFETKTDLCLVMTIMNGGDIRYHIYNVDEDNPGFQEPRAIFYTAQIVSGLEHLH  306 (543)
T ss_dssp             TCHHHHHHHHHHHHHCCCTTBCCEEEEEECSSEEEEEECCCTTCBHHHHHHTSSTTSCSCCHHHHHHHHHHHHHHHHHHH
T ss_pred             HHHHHHHHHHHHHHhcCCCCEeeEEEEEeeCCEEEEEEEeccCCCHHHHHHHhhcccccccHHHHHHHHHHHHHHHHHHH
Confidence            456788999999999999999999999999999999999999999999886532     1   45678999999999999


Q ss_pred             cCCCCCceeccCCCCCeeecCCCCeEEeeccCceecCCCCcceeecccccCCCccCcccccccCCCcchhhHHHHHHHHH
Q 044022           83 FGFPRPIVLRNFKTQNILFNEENVAKWFDFLLSISIPEGETHITTDRVIGTRGYSAPEYISICVLNEKSNVFSFGAFLFE  162 (241)
Q Consensus        83 ~~~~~~ivh~dl~~~nil~~~~~~~~l~df~~~~~~~~~~~~~~~~~~~~~~~~~aPE~~~~~~~~~~~Di~s~G~~~~~  162 (241)
                         +++|+||||||+|||++.++.+||+|||++.........  .....||+.|+|||++.+..++.++|+||||+++|+
T Consensus       307 ---~~gIvHrDLKP~NILl~~~g~vkL~DFGla~~~~~~~~~--~~~~~GT~~Y~APE~l~~~~~~~~~DiwSlGvilye  381 (543)
T 3c4z_A          307 ---QRNIIYRDLKPENVLLDDDGNVRISDLGLAVELKAGQTK--TKGYAGTPGFMAPELLLGEEYDFSVDYFALGVTLYE  381 (543)
T ss_dssp             ---HTTEECCCCCGGGEEECTTSCEEECCCTTCEECCTTCCC--BCCCCSCTTTSCHHHHTTCCBCTHHHHHHHHHHHHH
T ss_pred             ---HcCCcccCCChHHEEEeCCCCEEEeecceeeeccCCCcc--cccccCCccccChhhhcCCCCChHHhcCcchHHHHH
Confidence               899999999999999999999999999999876544321  133479999999999999899999999999999999


Q ss_pred             HHhcCcccccccccCCCcccchHHHHHHHhhhcccCCCCCCccccCCCchhHHHHHHHHHHHHHHhccCCCCCCCCCC
Q 044022          163 LLAGRIHIWDLLKDTHDHGCFFNEYLKNYLEDKRFTGIPAPIIVQDIPCIEKEQQLHASAQLTLECVNNSPEDRPTMV  240 (241)
Q Consensus       163 ~~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~cl~~~p~~Rpt~~  240 (241)
                      |++|+.||......     ....+......... . .     ...        ..+..+.+++.+||+.||++||++.
T Consensus       382 lltG~~PF~~~~~~-----~~~~~~~~~i~~~~-~-~-----~p~--------~~s~~~~~li~~lL~~dP~~R~~~~  439 (543)
T 3c4z_A          382 MIAARGPFRARGEK-----VENKELKQRVLEQA-V-T-----YPD--------KFSPASKDFCEALLQKDPEKRLGFR  439 (543)
T ss_dssp             HHHSSCSSCCTTCC-----CCHHHHHHHHHHCC-C-C-----CCT--------TSCHHHHHHHHHHSCSSGGGSCCCB
T ss_pred             HHhCCCCCCCCccc-----hhHHHHHHHHhhcc-c-C-----CCc--------ccCHHHHHHHHHhccCCHhHCCCCc
Confidence            99999999652111     11122222221111 0 1     111        1225788999999999999999864


No 125
>1u5q_A Serine/threonine protein kinase TAO2; transferase; HET: SEP; 2.10A {Rattus norvegicus} SCOP: d.144.1.7 PDB: 1u5r_A* 2gcd_A*
Probab=100.00  E-value=1.3e-39  Score=267.80  Aligned_cols=198  Identities=22%  Similarity=0.346  Sum_probs=156.6

Q ss_pred             cHHHHHHHHHHHHhcCCCcccceeeeeeeCCcceEEEEecCCCCHHHhhcCC--C---chHHHHHHHHHHHhchhhcCCC
Q 044022           12 TYGSCINNITYAAQMSHNHILKRIGCCLQTPIPILVFQSVEYGTLRDCIFGA--P---LPRLKIASDIVNSLAYLHFGFP   86 (241)
Q Consensus        12 ~~~~~~~e~~~l~~l~h~~iv~~~~~~~~~~~~~lv~e~~~~~sL~~~l~~~--~---~~~~~~~~~i~~~l~~lh~~~~   86 (241)
                      ..+++.+|++++++++||||+++++++...+..++||||+. |+|.+++...  .   ..+..++.+++.||.|||   +
T Consensus        97 ~~~~~~~E~~~l~~l~hpniv~~~~~~~~~~~~~lv~e~~~-g~l~~~l~~~~~~l~~~~~~~i~~qi~~aL~~LH---~  172 (348)
T 1u5q_A           97 KWQDIIKEVRFLQKLRHPNTIQYRGCYLREHTAWLVMEYCL-GSASDLLEVHKKPLQEVEIAAVTHGALQGLAYLH---S  172 (348)
T ss_dssp             HHHHHHHHHHHHHHCCCTTBCCEEEEEEETTEEEEEEECCS-EEHHHHHHHHTSCCCHHHHHHHHHHHHHHHHHHH---H
T ss_pred             HHHHHHHHHHHHHhCCCCCEeeEEEEEEECCeEEEEEecCC-CCHHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHH---h
Confidence            45678999999999999999999999999999999999997 6888877422  2   246789999999999999   8


Q ss_pred             CCceeccCCCCCeeecCCCCeEEeeccCceecCCCCcceeecccccCCCccCccccc---ccCCCcchhhHHHHHHHHHH
Q 044022           87 RPIVLRNFKTQNILFNEENVAKWFDFLLSISIPEGETHITTDRVIGTRGYSAPEYIS---ICVLNEKSNVFSFGAFLFEL  163 (241)
Q Consensus        87 ~~ivh~dl~~~nil~~~~~~~~l~df~~~~~~~~~~~~~~~~~~~~~~~~~aPE~~~---~~~~~~~~Di~s~G~~~~~~  163 (241)
                      .+++||||||+|||++.++.+||+|||++......      ....||+.|+|||++.   ...++.++||||||+++|+|
T Consensus       173 ~~ivH~Dlkp~NIll~~~~~~kL~DfG~a~~~~~~------~~~~gt~~y~aPE~~~~~~~~~~~~~~DiwslG~il~el  246 (348)
T 1u5q_A          173 HNMIHRDVKAGNILLSEPGLVKLGDFGSASIMAPA------NSFVGTPYWMAPEVILAMDEGQYDGKVDVWSLGITCIEL  246 (348)
T ss_dssp             TTCBCCCCSGGGEEEETTTEEEECCCTTCBSSSSB------CCCCSCGGGCCHHHHHTTSSCCBCTHHHHHHHHHHHHHH
T ss_pred             CCeeeCCCCHHHEEECCCCCEEEeeccCceecCCC------CcccCCcceeCHhhhccccCCCCCcHHHHHHHHHHHHHH
Confidence            99999999999999999999999999998765432      2346899999999985   45788999999999999999


Q ss_pred             HhcCcccccccccCCCcccchHHHHHHHhhhcccCCCCCCccccCCCchhHHHHHHHHHHHHHHhccCCCCCCCCCCC
Q 044022          164 LAGRIHIWDLLKDTHDHGCFFNEYLKNYLEDKRFTGIPAPIIVQDIPCIEKEQQLHASAQLTLECVNNSPEDRPTMVD  241 (241)
Q Consensus       164 ~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~cl~~~p~~Rpt~~e  241 (241)
                      ++|+.||....         ..+.......... ...    ...        ..++.+.+++.+||+.||++|||++|
T Consensus       247 l~g~~p~~~~~---------~~~~~~~~~~~~~-~~~----~~~--------~~~~~l~~li~~~l~~dP~~Rps~~~  302 (348)
T 1u5q_A          247 AERKPPLFNMN---------AMSALYHIAQNES-PAL----QSG--------HWSEYFRNFVDSCLQKIPQDRPTSEV  302 (348)
T ss_dssp             HHSSCTTTTSC---------HHHHHHHHHHSCC-CCC----CCT--------TSCHHHHHHHHHHTCSSGGGSCCHHH
T ss_pred             HhCCCCCCCCC---------hHHHHHHHHhcCC-CCC----CCC--------CCCHHHHHHHHHHcccChhhCcCHHH
Confidence            99999995421         1111222211111 010    011        12256889999999999999999853


No 126
>4ejn_A RAC-alpha serine/threonine-protein kinase; AKT1, autoinhibition, allosteric inhibitor, kinase inhibitor hydrophobic collapase, ATPase; HET: 0R4; 2.19A {Homo sapiens} PDB: 3o96_A*
Probab=100.00  E-value=8.3e-40  Score=277.32  Aligned_cols=198  Identities=17%  Similarity=0.226  Sum_probs=150.0

Q ss_pred             ccHHHHHHHHHHHHhcCCCcccceeeeeeeCCcceEEEEecCCCCHHHhhcCCC----chHHHHHHHHHHHhchhhcCCC
Q 044022           11 HTYGSCINNITYAAQMSHNHILKRIGCCLQTPIPILVFQSVEYGTLRDCIFGAP----LPRLKIASDIVNSLAYLHFGFP   86 (241)
Q Consensus        11 ~~~~~~~~e~~~l~~l~h~~iv~~~~~~~~~~~~~lv~e~~~~~sL~~~l~~~~----~~~~~~~~~i~~~l~~lh~~~~   86 (241)
                      .....+.+|++++++++||||+++++++...+..++||||+++|+|.+++....    .....++.|++.||.|||   +
T Consensus       190 ~~~~~~~~e~~~l~~l~h~~iv~l~~~~~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~qi~~aL~~LH---~  266 (446)
T 4ejn_A          190 DEVAHTLTENRVLQNSRHPFLTALKYSFQTHDRLCFVMEYANGGELFFHLSRERVFSEDRARFYGAEIVSALDYLH---S  266 (446)
T ss_dssp             -----------CCCCCSCTTSCCEEEEEEETTEEEEEECCCSSCBHHHHHHHHSCCCHHHHHHHHHHHHHHHHHHH---H
T ss_pred             HHHHHHHHHHHHHHhCCCCeEeeEEEEEeeCCEEEEEEeeCCCCcHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHh---h
Confidence            445678899999999999999999999999999999999999999999886532    246778999999999999   7


Q ss_pred             -CCceeccCCCCCeeecCCCCeEEeeccCceecCCCCcceeecccccCCCccCcccccccCCCcchhhHHHHHHHHHHHh
Q 044022           87 -RPIVLRNFKTQNILFNEENVAKWFDFLLSISIPEGETHITTDRVIGTRGYSAPEYISICVLNEKSNVFSFGAFLFELLA  165 (241)
Q Consensus        87 -~~ivh~dl~~~nil~~~~~~~~l~df~~~~~~~~~~~~~~~~~~~~~~~~~aPE~~~~~~~~~~~Di~s~G~~~~~~~~  165 (241)
                       .+|+||||||+|||++.++.+||+|||++........  ......||+.|+|||++.+..++.++||||||+++|+|++
T Consensus       267 ~~giiHrDlkp~NIll~~~~~~kl~DFG~a~~~~~~~~--~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~ell~  344 (446)
T 4ejn_A          267 EKNVVYRDLKLENLMLDKDGHIKITDFGLCKEGIKDGA--TMKTFCGTPEYLAPEVLEDNDYGRAVDWWGLGVVMYEMMC  344 (446)
T ss_dssp             HTCCCCCCCCGGGEEECSSSCEEECCCCCCCTTCC-------CCSSSCGGGCCHHHHHTSCCCTHHHHHHHHHHHHHHHH
T ss_pred             cCCEEECCCCHHHEEECCCCCEEEccCCCceeccCCCc--ccccccCCccccCHhhcCCCCCCCccchhhhHHHHHHHhh
Confidence             8999999999999999999999999999875433221  2234578999999999999999999999999999999999


Q ss_pred             cCcccccccccCCCcccchHHHHHHHhhhcccCCCCCCccccCCCchhHHHHHHHHHHHHHHhccCCCCCCC
Q 044022          166 GRIHIWDLLKDTHDHGCFFNEYLKNYLEDKRFTGIPAPIIVQDIPCIEKEQQLHASAQLTLECVNNSPEDRP  237 (241)
Q Consensus       166 g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~cl~~~p~~Rp  237 (241)
                      |+.||....         ..+......... . .     ....        .+..+.+|+.+||+.||++||
T Consensus       345 g~~Pf~~~~---------~~~~~~~i~~~~-~-~-----~p~~--------~~~~~~~li~~~L~~dP~~R~  392 (446)
T 4ejn_A          345 GRLPFYNQD---------HEKLFELILMEE-I-R-----FPRT--------LGPEAKSLLSGLLKKDPKQRL  392 (446)
T ss_dssp             SSCSSCCSS---------HHHHHHHHHHCC-C-C-----CCTT--------SCHHHHHHHHHHTCSSTTTST
T ss_pred             CCCCCCCCC---------HHHHHHHHHhCC-C-C-----CCcc--------CCHHHHHHHHHHcccCHHHhC
Confidence            999996521         112222221111 0 0     1111        125788999999999999999


No 127
>3eqc_A Dual specificity mitogen-activated protein kinase; MEK1 kinase, ATP-binding, disease mutation, nucleoti binding, phosphoprotein; HET: 3BM AGS; 1.80A {Homo sapiens} PDB: 3eqd_A* 3eqf_A* 3eqg_A* 3eqh_A* 3eqi_A* 2y4i_C* 3eqb_A* 2p55_A* 1s9j_A* 3dy7_A* 3e8n_A* 3v01_A* 3v04_A* 3dv3_A* 3mbl_A* 3pp1_A* 3orn_A* 3os3_A* 3sls_A* 1s9i_A* ...
Probab=100.00  E-value=4.1e-40  Score=271.79  Aligned_cols=165  Identities=22%  Similarity=0.295  Sum_probs=140.3

Q ss_pred             CcccccccccccHHHHHHHHHHHHhcCCCcccceeeeeeeCCcceEEEEecCCCCHHHhhcCCC----chHHHHHHHHHH
Q 044022            1 MKFYGHEYHRHTYGSCINNITYAAQMSHNHILKRIGCCLQTPIPILVFQSVEYGTLRDCIFGAP----LPRLKIASDIVN   76 (241)
Q Consensus         1 iK~~~~~~~~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~~~~~~~lv~e~~~~~sL~~~l~~~~----~~~~~~~~~i~~   76 (241)
                      ||++..+......+.+.+|++++++++||||+++++++...+..++||||+++++|.+++....    .....++.+++.
T Consensus        63 ~K~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~i~~~i~~  142 (360)
T 3eqc_A           63 RKLIHLEIKPAIRNQIIRELQVLHECNSPYIVGFYGAFYSDGEISICMEHMDGGSLDQVLKKAGRIPEQILGKVSIAVIK  142 (360)
T ss_dssp             EEEEECCCCHHHHHHHHHHHGGGGGCCCTTBCCEEEEEEETTEEEEEECCCTTCBHHHHHHHHSSCCHHHHHHHHHHHHH
T ss_pred             EEEeccccCHHHHHHHHHHHHHHHHCCCCCEEEEeEEEEECCEEEEEEECCCCCCHHHHHHHcCCCCHHHHHHHHHHHHH
Confidence            3555544444556789999999999999999999999999999999999999999999986532    146789999999


Q ss_pred             HhchhhcCCCC-CceeccCCCCCeeecCCCCeEEeeccCceecCCCCcceeecccccCCCccCcccccccCCCcchhhHH
Q 044022           77 SLAYLHFGFPR-PIVLRNFKTQNILFNEENVAKWFDFLLSISIPEGETHITTDRVIGTRGYSAPEYISICVLNEKSNVFS  155 (241)
Q Consensus        77 ~l~~lh~~~~~-~ivh~dl~~~nil~~~~~~~~l~df~~~~~~~~~~~~~~~~~~~~~~~~~aPE~~~~~~~~~~~Di~s  155 (241)
                      ||.|||   +. +++|+||||+||+++.++.++|+|||.+.......    .....|++.|+|||++.+..++.++||||
T Consensus       143 ~l~~lh---~~~~i~H~dlkp~Nil~~~~~~~kl~Dfg~~~~~~~~~----~~~~~gt~~y~aPE~~~~~~~~~~~Di~s  215 (360)
T 3eqc_A          143 GLTYLR---EKHKIMHRDVKPSNILVNSRGEIKLCDFGVSGQLIDSM----ANSFVGTRSYMSPERLQGTHYSVQSDIWS  215 (360)
T ss_dssp             HHHHHH---HHHCCCCSCCSGGGEEECTTCCEEECCCCCCHHHHHHC--------CCCCTTCCHHHHTTCCCSHHHHHHH
T ss_pred             HHHHHH---HhCCEEcCCccHHHEEECCCCCEEEEECCCCccccccc----ccCCCCCCCeECHHHHcCCCCCchhhHHH
Confidence            999999   75 89999999999999999999999999986442211    13346899999999999989999999999


Q ss_pred             HHHHHHHHHhcCccccc
Q 044022          156 FGAFLFELLAGRIHIWD  172 (241)
Q Consensus       156 ~G~~~~~~~~g~~p~~~  172 (241)
                      ||+++|+|++|+.||..
T Consensus       216 lG~il~~l~~g~~pf~~  232 (360)
T 3eqc_A          216 MGLSLVEMAVGRYPIPP  232 (360)
T ss_dssp             HHHHHHHHHHTSCCSSC
T ss_pred             HHHHHHHHHhCCCCCCC
Confidence            99999999999999964


No 128
>1fvr_A Tyrosine-protein kinase TIE-2; tyrosine kinase, transferase; 2.20A {Homo sapiens} SCOP: d.144.1.7 PDB: 2oo8_X* 2osc_A* 2p4i_A* 3l8p_A* 2wqb_A*
Probab=100.00  E-value=2e-39  Score=264.43  Aligned_cols=211  Identities=20%  Similarity=0.276  Sum_probs=160.0

Q ss_pred             cccccccccccHHHHHHHHHHHHhc-CCCcccceeeeeeeCCcceEEEEecCCCCHHHhhcCCC----------------
Q 044022            2 KFYGHEYHRHTYGSCINNITYAAQM-SHNHILKRIGCCLQTPIPILVFQSVEYGTLRDCIFGAP----------------   64 (241)
Q Consensus         2 K~~~~~~~~~~~~~~~~e~~~l~~l-~h~~iv~~~~~~~~~~~~~lv~e~~~~~sL~~~l~~~~----------------   64 (241)
                      |.+.........+++.+|+++++++ +||||+++++++...+..++||||+++++|.+++....                
T Consensus        58 K~~~~~~~~~~~~~~~~E~~~l~~l~~hp~iv~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~  137 (327)
T 1fvr_A           58 KRMKEYASKDDHRDFAGELEVLCKLGHHPNIINLLGACEHRGYLYLAIEYAPHGNLLDFLRKSRVLETDPAFAIANSTAS  137 (327)
T ss_dssp             EEEECC------CHHHHHHHHHTTCCCCTTBCCEEEEEEETTEEEEEECCCTTCBHHHHHHTTCHHHHCHHHHHHTTBSC
T ss_pred             eeeccccchHHHHHHHHHHHHHHhccCCCchhhhceeeeeCCceEEEEecCCCCCHHHHHHhcccccccccccccccccc
Confidence            4443333445667899999999999 99999999999999999999999999999999987543                


Q ss_pred             -c---hHHHHHHHHHHHhchhhcCCCCCceeccCCCCCeeecCCCCeEEeeccCceecCCCCcceeecccccCCCccCcc
Q 044022           65 -L---PRLKIASDIVNSLAYLHFGFPRPIVLRNFKTQNILFNEENVAKWFDFLLSISIPEGETHITTDRVIGTRGYSAPE  140 (241)
Q Consensus        65 -~---~~~~~~~~i~~~l~~lh~~~~~~ivh~dl~~~nil~~~~~~~~l~df~~~~~~~~~~~~~~~~~~~~~~~~~aPE  140 (241)
                       .   ....++.+++.||.|||   +.+++||||||+||+++.++.++|+|||++.......   ......+++.|+|||
T Consensus       138 ~~~~~~~~~i~~qi~~aL~~LH---~~~ivH~dlkp~NIl~~~~~~~kL~Dfg~~~~~~~~~---~~~~~~~~~~y~aPE  211 (327)
T 1fvr_A          138 TLSSQQLLHFAADVARGMDYLS---QKQFIHRDLAARNILVGENYVAKIADFGLSRGQEVYV---KKTMGRLPVRWMAIE  211 (327)
T ss_dssp             SSCHHHHHHHHHHHHHHHHHHH---HTTEECSCCSGGGEEECGGGCEEECCTTCEESSCEEC---CC----CCTTTCCHH
T ss_pred             cCCHHHHHHHHHHHHHHHHHHH---hCCccCCCCccceEEEcCCCeEEEcccCcCccccccc---cccCCCCCccccChh
Confidence             1   46789999999999999   8999999999999999999999999999986432211   112234678899999


Q ss_pred             cccccCCCcchhhHHHHHHHHHHHh-cCcccccccccCCCcccchHHHHHHHhhhcccCCCCCCccccCCCchhHHHHHH
Q 044022          141 YISICVLNEKSNVFSFGAFLFELLA-GRIHIWDLLKDTHDHGCFFNEYLKNYLEDKRFTGIPAPIIVQDIPCIEKEQQLH  219 (241)
Q Consensus       141 ~~~~~~~~~~~Di~s~G~~~~~~~~-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  219 (241)
                      .+.+..++.++||||||+++|+|++ |..||....         ..+...... .+....     ...        ..+.
T Consensus       212 ~~~~~~~~~~~Di~slG~il~ellt~g~~pf~~~~---------~~~~~~~~~-~~~~~~-----~~~--------~~~~  268 (327)
T 1fvr_A          212 SLNYSVYTTNSDVWSYGVLLWEIVSLGGTPYCGMT---------CAELYEKLP-QGYRLE-----KPL--------NCDD  268 (327)
T ss_dssp             HHHHCEECHHHHHHHHHHHHHHHHTTSCCTTTTCC---------HHHHHHHGG-GTCCCC-----CCT--------TBCH
T ss_pred             hhccccCCchhcchHHHHHHHHHHcCCCCCCCCCc---------HHHHHHHhh-cCCCCC-----CCC--------CCCH
Confidence            9988889999999999999999998 999995521         112222211 111111     111        1225


Q ss_pred             HHHHHHHHhccCCCCCCCCCCC
Q 044022          220 ASAQLTLECVNNSPEDRPTMVD  241 (241)
Q Consensus       220 ~~~~l~~~cl~~~p~~Rpt~~e  241 (241)
                      .+.+++.+||+.||++|||++|
T Consensus       269 ~l~~li~~~l~~dp~~Rps~~e  290 (327)
T 1fvr_A          269 EVYDLMRQCWREKPYERPSFAQ  290 (327)
T ss_dssp             HHHHHHHHHTCSSGGGSCCHHH
T ss_pred             HHHHHHHHHccCChhhCcCHHH
Confidence            7899999999999999999753


No 129
>4fl3_A Tyrosine-protein kinase SYK; transferase; HET: ANP; 1.90A {Homo sapiens} PDB: 4fl2_A* 1a81_A* 1csy_A* 1csz_A*
Probab=100.00  E-value=1.1e-39  Score=286.77  Aligned_cols=214  Identities=22%  Similarity=0.297  Sum_probs=161.8

Q ss_pred             Ccccccccc-cccHHHHHHHHHHHHhcCCCcccceeeeeeeCCcceEEEEecCCCCHHHhhcCCCc----hHHHHHHHHH
Q 044022            1 MKFYGHEYH-RHTYGSCINNITYAAQMSHNHILKRIGCCLQTPIPILVFQSVEYGTLRDCIFGAPL----PRLKIASDIV   75 (241)
Q Consensus         1 iK~~~~~~~-~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~~~~~~~lv~e~~~~~sL~~~l~~~~~----~~~~~~~~i~   75 (241)
                      ||++..+.. ....+++.+|++++++++|||||++++++. .+..++||||+++|+|.+++.....    .+..++.+|+
T Consensus       401 vK~~~~~~~~~~~~~~~~~E~~il~~l~hpnIv~l~~~~~-~~~~~lv~E~~~~g~L~~~l~~~~~l~~~~~~~i~~qi~  479 (635)
T 4fl3_A          401 VKILKNEANDPALKDELLAEANVMQQLDNPYIVRMIGICE-AESWMLVMEMAELGPLNKYLQQNRHVKDKNIIELVHQVS  479 (635)
T ss_dssp             EEEECGGGGCGGGHHHHHHHHHHHHHCCCTTBCCEEEEEE-SSSEEEEEECCTTEEHHHHHHHCTTCCHHHHHHHHHHHH
T ss_pred             EEEeccccCCHHHHHHHHHHHHHHHhCCCCCEeeEEEEEe-cCCEEEEEEccCCCCHHHHHhhCCCCCHHHHHHHHHHHH
Confidence            355544332 234678999999999999999999999996 4568899999999999999865432    4678999999


Q ss_pred             HHhchhhcCCCCCceeccCCCCCeeecCCCCeEEeeccCceecCCCCcc-eeecccccCCCccCcccccccCCCcchhhH
Q 044022           76 NSLAYLHFGFPRPIVLRNFKTQNILFNEENVAKWFDFLLSISIPEGETH-ITTDRVIGTRGYSAPEYISICVLNEKSNVF  154 (241)
Q Consensus        76 ~~l~~lh~~~~~~ivh~dl~~~nil~~~~~~~~l~df~~~~~~~~~~~~-~~~~~~~~~~~~~aPE~~~~~~~~~~~Di~  154 (241)
                      .||.|||   +++|+||||||+|||++.++.+||+|||++......... .......+|+.|+|||++.+..++.++|||
T Consensus       480 ~~L~yLH---~~~iiHrDLkp~NILl~~~~~~kL~DFGla~~~~~~~~~~~~~~~~~~t~~y~APE~~~~~~~~~~sDvw  556 (635)
T 4fl3_A          480 MGMKYLE---ESNFVHRDLAARNVLLVTQHYAKISDFGLSKALRADENYYKAQTHGKWPVKWYAPECINYYKFSSKSDVW  556 (635)
T ss_dssp             HHHHHHH---HTTCCCSCCSGGGEEEEETTEEEECCTTHHHHTTC-------------CGGGSCHHHHHHCCCCHHHHHH
T ss_pred             HHHHHHH---HCCEeCCCCChHhEEEeCCCCEEEEEcCCccccccCccccccccCCCCceeeeChhhhcCCCCCcHHHHH
Confidence            9999999   899999999999999999999999999999766443211 122233467889999999988999999999


Q ss_pred             HHHHHHHHHHh-cCcccccccccCCCcccchHHHHHHHhhhcccCCCCCCccccCCCchhHHHHHHHHHHHHHHhccCCC
Q 044022          155 SFGAFLFELLA-GRIHIWDLLKDTHDHGCFFNEYLKNYLEDKRFTGIPAPIIVQDIPCIEKEQQLHASAQLTLECVNNSP  233 (241)
Q Consensus       155 s~G~~~~~~~~-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~cl~~~p  233 (241)
                      |||+++|+|++ |+.||....         ..+.... ...+.....+     .        ..+..+.+++.+||+.||
T Consensus       557 SlGv~l~ellt~G~~Pf~~~~---------~~~~~~~-i~~~~~~~~p-----~--------~~~~~l~~li~~cl~~dP  613 (635)
T 4fl3_A          557 SFGVLMWEAFSYGQKPYRGMK---------GSEVTAM-LEKGERMGCP-----A--------GCPREMYDLMNLCWTYDV  613 (635)
T ss_dssp             HHHHHHHHHHTTTCCSSTTCC---------HHHHHHH-HHTTCCCCCC-----T--------TCCHHHHHHHHHHTCSST
T ss_pred             HHHHHHHHHHhCCCCCCCCCC---------HHHHHHH-HHcCCCCCCC-----C--------CCCHHHHHHHHHHcCCCH
Confidence            99999999998 999995521         1122222 2222211111     1        223678999999999999


Q ss_pred             CCCCCCCC
Q 044022          234 EDRPTMVD  241 (241)
Q Consensus       234 ~~Rpt~~e  241 (241)
                      ++|||+++
T Consensus       614 ~~RPs~~~  621 (635)
T 4fl3_A          614 ENRPGFAA  621 (635)
T ss_dssp             TTSCCHHH
T ss_pred             hHCcCHHH
Confidence            99999753


No 130
>4fvq_A Tyrosine-protein kinase JAK2; janus protein kinase, pseudokinase, ATP binding, phosphoryla transferase; HET: ATP; 1.75A {Homo sapiens} PDB: 4fvp_A* 4fvr_A*
Probab=100.00  E-value=1.2e-39  Score=261.02  Aligned_cols=198  Identities=23%  Similarity=0.352  Sum_probs=155.3

Q ss_pred             ccHHHHHHHHHHHHhcCCCcccceeeeeeeCCcceEEEEecCCCCHHHhhcCCCc-----hHHHHHHHHHHHhchhhcCC
Q 044022           11 HTYGSCINNITYAAQMSHNHILKRIGCCLQTPIPILVFQSVEYGTLRDCIFGAPL-----PRLKIASDIVNSLAYLHFGF   85 (241)
Q Consensus        11 ~~~~~~~~e~~~l~~l~h~~iv~~~~~~~~~~~~~lv~e~~~~~sL~~~l~~~~~-----~~~~~~~~i~~~l~~lh~~~   85 (241)
                      ...+.+.+|++++++++||||+++++++...+..++||||+++++|.+++.....     .+..++.|++.||.|||   
T Consensus        54 ~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~i~~qi~~~L~~LH---  130 (289)
T 4fvq_A           54 NYSESFFEAASMMSKLSHKHLVLNYGVCVCGDENILVQEFVKFGSLDTYLKKNKNCINILWKLEVAKQLAAAMHFLE---  130 (289)
T ss_dssp             GGHHHHHHHHHHHHTSCCTTBCCEEEEECCTTCCEEEEECCTTCBHHHHHHHTGGGCCHHHHHHHHHHHHHHHHHHH---
T ss_pred             HHHHHHHHHHHHHHhCCCCCEeEEEEEEEeCCCCEEEEECCCCCCHHHHHHhCCCCCCHHHHHHHHHHHHHHHHHHh---
Confidence            4567899999999999999999999999999999999999999999999876432     46789999999999999   


Q ss_pred             CCCceeccCCCCCeeecCCCC--------eEEeeccCceecCCCCcceeecccccCCCccCcccccc-cCCCcchhhHHH
Q 044022           86 PRPIVLRNFKTQNILFNEENV--------AKWFDFLLSISIPEGETHITTDRVIGTRGYSAPEYISI-CVLNEKSNVFSF  156 (241)
Q Consensus        86 ~~~ivh~dl~~~nil~~~~~~--------~~l~df~~~~~~~~~~~~~~~~~~~~~~~~~aPE~~~~-~~~~~~~Di~s~  156 (241)
                      +++++||||||+|||++.++.        ++|+|||.+......      ....+++.|+|||.+.+ ..++.++|||||
T Consensus       131 ~~~ivH~Dlkp~NIll~~~~~~~~~~~~~~kl~Dfg~~~~~~~~------~~~~~~~~y~aPE~~~~~~~~~~~~Diwsl  204 (289)
T 4fvq_A          131 ENTLIHGNVCAKNILLIREEDRKTGNPPFIKLSDPGISITVLPK------DILQERIPWVPPECIENPKNLNLATDKWSF  204 (289)
T ss_dssp             HTTCCCCCCCGGGEEEEECCBGGGTBCCEEEECCCCSCTTTSCH------HHHHHTTTTSCHHHHHCGGGCCHHHHHHHH
T ss_pred             hCCeECCCcCcceEEEecCCcccccccceeeeccCcccccccCc------cccCCcCcccCHHHhCCCCCCCchhHHHHH
Confidence            899999999999999998887        999999998644322      23357889999999987 678999999999


Q ss_pred             HHHHHHHHhcCcccccccccCCCcccchHHHHHHHhhhcccCCCCCCccccCCCchhHHHHHHHHHHHHHHhccCCCCCC
Q 044022          157 GAFLFELLAGRIHIWDLLKDTHDHGCFFNEYLKNYLEDKRFTGIPAPIIVQDIPCIEKEQQLHASAQLTLECVNNSPEDR  236 (241)
Q Consensus       157 G~~~~~~~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~cl~~~p~~R  236 (241)
                      |+++|+|++|..|+.....        .............   .+     ...        +..+.+++.+||+.||++|
T Consensus       205 G~il~el~~g~~~~~~~~~--------~~~~~~~~~~~~~---~~-----~~~--------~~~l~~li~~~l~~dp~~R  260 (289)
T 4fvq_A          205 GTTLWEICSGGDKPLSALD--------SQRKLQFYEDRHQ---LP-----APK--------AAELANLINNCMDYEPDHR  260 (289)
T ss_dssp             HHHHHHHHTTTCCTTTTSC--------HHHHHHHHHTTCC---CC-----CCS--------SCTTHHHHHHHSCSSGGGS
T ss_pred             HHHHHHHHcCCCCCccccc--------hHHHHHHhhccCC---CC-----CCC--------CHHHHHHHHHHcCCChhHC
Confidence            9999999996554433111        1111111111111   11     111        1357899999999999999


Q ss_pred             CCCCC
Q 044022          237 PTMVD  241 (241)
Q Consensus       237 pt~~e  241 (241)
                      ||++|
T Consensus       261 ps~~~  265 (289)
T 4fvq_A          261 PSFRA  265 (289)
T ss_dssp             CCHHH
T ss_pred             cCHHH
Confidence            99753


No 131
>3brb_A Proto-oncogene tyrosine-protein kinase MER; ATP-binding, disease mutation, glycoprotein, nucleot binding, phosphorylation, receptor; HET: ADP; 1.90A {Homo sapiens} PDB: 3bpr_A* 2p0c_A*
Probab=100.00  E-value=2.8e-39  Score=261.93  Aligned_cols=205  Identities=21%  Similarity=0.331  Sum_probs=151.8

Q ss_pred             ccHHHHHHHHHHHHhcCCCcccceeeeeeeCC-----cceEEEEecCCCCHHHhhcCC-------C---chHHHHHHHHH
Q 044022           11 HTYGSCINNITYAAQMSHNHILKRIGCCLQTP-----IPILVFQSVEYGTLRDCIFGA-------P---LPRLKIASDIV   75 (241)
Q Consensus        11 ~~~~~~~~e~~~l~~l~h~~iv~~~~~~~~~~-----~~~lv~e~~~~~sL~~~l~~~-------~---~~~~~~~~~i~   75 (241)
                      ...+.+.+|++++++++||||+++++++....     ..++|+||+++++|.+++...       .   ...+.++.+++
T Consensus        78 ~~~~~~~~e~~~l~~l~h~~iv~~~~~~~~~~~~~~~~~~~v~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~i~~qi~  157 (313)
T 3brb_A           78 REIEEFLSEAACMKDFSHPNVIRLLGVCIEMSSQGIPKPMVILPFMKYGDLHTYLLYSRLETGPKHIPLQTLLKFMVDIA  157 (313)
T ss_dssp             HHHHHHHHHHHHHHTCCCTTBCCCCEEEEC-------CEEEEEECCTTCBHHHHHHHTTBTTSCCCCCHHHHHHHHHHHH
T ss_pred             hHHHHHHHHHHHHhcCCCCCeeeeeEEEeeccccCCcccEEEEecccCCCHHHHHHHhhhhcCCccCCHHHHHHHHHHHH
Confidence            34577999999999999999999999998654     359999999999999998321       1   14678999999


Q ss_pred             HHhchhhcCCCCCceeccCCCCCeeecCCCCeEEeeccCceecCCCCcceeecccccCCCccCcccccccCCCcchhhHH
Q 044022           76 NSLAYLHFGFPRPIVLRNFKTQNILFNEENVAKWFDFLLSISIPEGETHITTDRVIGTRGYSAPEYISICVLNEKSNVFS  155 (241)
Q Consensus        76 ~~l~~lh~~~~~~ivh~dl~~~nil~~~~~~~~l~df~~~~~~~~~~~~~~~~~~~~~~~~~aPE~~~~~~~~~~~Di~s  155 (241)
                      .||.|||   +.+++||||||+||+++.++.+||+|||.+................+++.|+|||.+.+..++.++||||
T Consensus       158 ~aL~~LH---~~~ivH~dikp~NIli~~~~~~kl~Dfg~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~s  234 (313)
T 3brb_A          158 LGMEYLS---NRNFLHRDLAARNCMLRDDMTVCVADFGLSKKIYSGDYYRQGRIAKMPVKWIAIESLADRVYTSKSDVWA  234 (313)
T ss_dssp             HHHHHHH---TTTCCCCCCSGGGEEECTTSCEEECSCSCC----------------CCGGGSCHHHHHSSCCCHHHHHHH
T ss_pred             HHHHHHH---hCCcccCCCCcceEEEcCCCcEEEeecCcceecccccccCcccccCCCccccCchhhcCCCccchhhhHH
Confidence            9999999   9999999999999999999999999999987664433222223345678899999999889999999999


Q ss_pred             HHHHHHHHHh-cCcccccccccCCCcccchHHHHHHHhhhcccCCCCCCccccCCCchhHHHHHHHHHHHHHHhccCCCC
Q 044022          156 FGAFLFELLA-GRIHIWDLLKDTHDHGCFFNEYLKNYLEDKRFTGIPAPIIVQDIPCIEKEQQLHASAQLTLECVNNSPE  234 (241)
Q Consensus       156 ~G~~~~~~~~-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~cl~~~p~  234 (241)
                      ||+++|+|++ |..||......         +...... .+...     .....        .+..+.+++.+||+.||+
T Consensus       235 lG~il~el~~~g~~p~~~~~~~---------~~~~~~~-~~~~~-----~~~~~--------~~~~l~~li~~~l~~dp~  291 (313)
T 3brb_A          235 FGVTMWEIATRGMTPYPGVQNH---------EMYDYLL-HGHRL-----KQPED--------CLDELYEIMYSCWRTDPL  291 (313)
T ss_dssp             HHHHHHHHHTTSCCSSTTCCGG---------GHHHHHH-TTCCC-----CCBTT--------CCHHHHHHHHHTTCSSGG
T ss_pred             HHHHHHHHHhcCCCCCccCCHH---------HHHHHHH-cCCCC-----CCCcc--------ccHHHHHHHHHHcCCChh
Confidence            9999999999 88898552211         1111111 11111     11111        225789999999999999


Q ss_pred             CCCCCCC
Q 044022          235 DRPTMVD  241 (241)
Q Consensus       235 ~Rpt~~e  241 (241)
                      +|||++|
T Consensus       292 ~Rps~~~  298 (313)
T 3brb_A          292 DRPTFSV  298 (313)
T ss_dssp             GSCCHHH
T ss_pred             hCcCHHH
Confidence            9999753


No 132
>1nxk_A MAP kinase-activated protein kinase 2; MK2, phosphorylation, staurosporine, transfe; HET: STU; 2.70A {Homo sapiens} SCOP: d.144.1.7 PDB: 1kwp_A* 1ny3_A* 2onl_C
Probab=100.00  E-value=3.7e-39  Score=269.63  Aligned_cols=207  Identities=17%  Similarity=0.267  Sum_probs=152.9

Q ss_pred             HHHHHHHHHHHHh-cCCCcccceeeeeee----CCcceEEEEecCCCCHHHhhcCCC---c---hHHHHHHHHHHHhchh
Q 044022           13 YGSCINNITYAAQ-MSHNHILKRIGCCLQ----TPIPILVFQSVEYGTLRDCIFGAP---L---PRLKIASDIVNSLAYL   81 (241)
Q Consensus        13 ~~~~~~e~~~l~~-l~h~~iv~~~~~~~~----~~~~~lv~e~~~~~sL~~~l~~~~---~---~~~~~~~~i~~~l~~l   81 (241)
                      ...+.+|+.++.+ .+||||+++++++..    .+..++||||+++|+|.+++....   .   ....++.+|+.||.||
T Consensus        98 ~~~~~~E~~~~~~~~~hp~iv~l~~~~~~~~~~~~~~~lv~E~~~gg~L~~~l~~~~~~~l~~~~~~~i~~qi~~aL~~L  177 (400)
T 1nxk_A           98 CPKARREVELHWRASQCPHIVRIVDVYENLYAGRKCLLIVMECLDGGELFSRIQDRGDQAFTEREASEIMKSIGEAIQYL  177 (400)
T ss_dssp             SHHHHHHHHHHHHHTTSTTBCCEEEEEEEEETTEEEEEEEEECCCSEEHHHHHHCC---CCBHHHHHHHHHHHHHHHHHH
T ss_pred             chhHHHHHHHHHHhcCCCCcceEeEEEeecccCCcEEEEEEEeCCCCcHHHHHHHhCCCCCCHHHHHHHHHHHHHHHHHH
Confidence            3567789998755 489999999999875    557899999999999999997642   1   4678999999999999


Q ss_pred             hcCCCCCceeccCCCCCeeecC---CCCeEEeeccCceecCCCCcceeecccccCCCccCcccccccCCCcchhhHHHHH
Q 044022           82 HFGFPRPIVLRNFKTQNILFNE---ENVAKWFDFLLSISIPEGETHITTDRVIGTRGYSAPEYISICVLNEKSNVFSFGA  158 (241)
Q Consensus        82 h~~~~~~ivh~dl~~~nil~~~---~~~~~l~df~~~~~~~~~~~~~~~~~~~~~~~~~aPE~~~~~~~~~~~Di~s~G~  158 (241)
                      |   +.+|+||||||+|||++.   ++.+||+|||++........   .....||+.|+|||++.+..++.++||||||+
T Consensus       178 H---~~~ivHrDlkp~Nill~~~~~~~~~kl~DFG~a~~~~~~~~---~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~  251 (400)
T 1nxk_A          178 H---SINIAHRDVKPENLLYTSKRPNAILKLTDFGFAKETTSHNS---LTTPCYTPYYVAPEVLGPEKYDKSCDMWSLGV  251 (400)
T ss_dssp             H---HTTEECCCCCGGGEEESSSSTTCCEEECCCTTCEECC--------------CTTCCGGGSCCCCSSSHHHHHHHHH
T ss_pred             H---HCCccccCcCcceEEEecCCCCccEEEEecccccccCCCCc---cccCCCCCCccCHhhcCCCCCCCcccHHHHHH
Confidence            9   899999999999999998   78999999999986543321   23456899999999999889999999999999


Q ss_pred             HHHHHHhcCcccccccccCCCcccchHHHHHHHhhhcccCCCCCCccccCCCchhHHHHHHHHHHHHHHhccCCCCCCCC
Q 044022          159 FLFELLAGRIHIWDLLKDTHDHGCFFNEYLKNYLEDKRFTGIPAPIIVQDIPCIEKEQQLHASAQLTLECVNNSPEDRPT  238 (241)
Q Consensus       159 ~~~~~~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~cl~~~p~~Rpt  238 (241)
                      ++|+|++|..||...........  ...    ....+.+ ..+.+.+         ...+..+.+|+.+||+.||++|||
T Consensus       252 il~ell~g~~pf~~~~~~~~~~~--~~~----~i~~~~~-~~~~~~~---------~~~s~~~~~li~~~L~~dP~~Rpt  315 (400)
T 1nxk_A          252 IMYILLCGYPPFYSNHGLAISPG--MKT----RIRMGQY-EFPNPEW---------SEVSEEVKMLIRNLLKTEPTQRMT  315 (400)
T ss_dssp             HHHHHHHSSCSCCCCTTCSSCCS--HHH----HHHHTCC-CCCTTTT---------TTSCHHHHHHHHTTSCSSGGGSCC
T ss_pred             HHHHHHhCCCCCCCCccccccHH--HHH----HHHcCcc-cCCCccc---------ccCCHHHHHHHHHHCCCChhHCcC
Confidence            99999999999965322211110  111    1111111 1111110         122357899999999999999999


Q ss_pred             CCC
Q 044022          239 MVD  241 (241)
Q Consensus       239 ~~e  241 (241)
                      ++|
T Consensus       316 ~~e  318 (400)
T 1nxk_A          316 ITE  318 (400)
T ss_dssp             HHH
T ss_pred             HHH
Confidence            753


No 133
>2r5t_A Serine/threonine-protein kinase SGK1; AGC protein kinase, apoptosis, ATP-binding, cytoplasm, endoplasmic reticulum, nucleotide-binding, nucleus; HET: ANP; 1.90A {Homo sapiens} PDB: 3hdm_A* 3hdn_A*
Probab=100.00  E-value=3.2e-39  Score=267.43  Aligned_cols=201  Identities=20%  Similarity=0.233  Sum_probs=152.2

Q ss_pred             ccHHHHHHHHHH-HHhcCCCcccceeeeeeeCCcceEEEEecCCCCHHHhhcCCC----chHHHHHHHHHHHhchhhcCC
Q 044022           11 HTYGSCINNITY-AAQMSHNHILKRIGCCLQTPIPILVFQSVEYGTLRDCIFGAP----LPRLKIASDIVNSLAYLHFGF   85 (241)
Q Consensus        11 ~~~~~~~~e~~~-l~~l~h~~iv~~~~~~~~~~~~~lv~e~~~~~sL~~~l~~~~----~~~~~~~~~i~~~l~~lh~~~   85 (241)
                      .....+.+|..+ ++.++||||+++++++...+..|+||||+++|+|.+++....    .....++.+|+.||.|||   
T Consensus        80 ~~~~~~~~e~~~ll~~~~hp~Iv~l~~~~~~~~~~~lv~E~~~gg~L~~~l~~~~~~~~~~~~~~~~qi~~aL~~LH---  156 (373)
T 2r5t_A           80 KEEKHIMSERNVLLKNVKHPFLVGLHFSFQTADKLYFVLDYINGGELFYHLQRERCFLEPRARFYAAEIASALGYLH---  156 (373)
T ss_dssp             -----------CCBCCCCCTTBCCEEEEEECSSEEEEEEECCCSCBHHHHHHHHSSCCHHHHHHHHHHHHHHHHHHH---
T ss_pred             HHHHHHHHHHHHHHHhCCCCCCCCEEEEEEeCCEEEEEEeCCCCCcHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHH---
Confidence            345567777776 467899999999999999999999999999999999886532    245678999999999999   


Q ss_pred             CCCceeccCCCCCeeecCCCCeEEeeccCceecCCCCcceeecccccCCCccCcccccccCCCcchhhHHHHHHHHHHHh
Q 044022           86 PRPIVLRNFKTQNILFNEENVAKWFDFLLSISIPEGETHITTDRVIGTRGYSAPEYISICVLNEKSNVFSFGAFLFELLA  165 (241)
Q Consensus        86 ~~~ivh~dl~~~nil~~~~~~~~l~df~~~~~~~~~~~~~~~~~~~~~~~~~aPE~~~~~~~~~~~Di~s~G~~~~~~~~  165 (241)
                      +++|+||||||+|||++.++.+||+|||++........  ......||+.|+|||++.+..++.++|+||||+++|+|++
T Consensus       157 ~~givHrDlkp~NIll~~~g~ikL~DFG~a~~~~~~~~--~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~ell~  234 (373)
T 2r5t_A          157 SLNIVYRDLKPENILLDSQGHIVLTDFGLCKENIEHNS--TTSTFCGTPEYLAPEVLHKQPYDRTVDWWCLGAVLYEMLY  234 (373)
T ss_dssp             HTTCCCCCCCGGGEEECTTSCEEECCCCBCGGGBCCCC--CCCSBSCCCCCCCHHHHTTCCCCTHHHHHHHHHHHHHHHH
T ss_pred             HCCceecCCCHHHEEECCCCCEEEeeCccccccccCCC--ccccccCCccccCHHHhCCCCCCchhhhHHHHHHHHHHHc
Confidence            89999999999999999999999999999875332211  1234578999999999999899999999999999999999


Q ss_pred             cCcccccccccCCCcccchHHHHHHHhhhcccCCCCCCccccCCCchhHHHHHHHHHHHHHHhccCCCCCCCCCC
Q 044022          166 GRIHIWDLLKDTHDHGCFFNEYLKNYLEDKRFTGIPAPIIVQDIPCIEKEQQLHASAQLTLECVNNSPEDRPTMV  240 (241)
Q Consensus       166 g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~cl~~~p~~Rpt~~  240 (241)
                      |..||....         ..+......... .      .+....        +..+.+++.+||+.||++||++.
T Consensus       235 G~~Pf~~~~---------~~~~~~~i~~~~-~------~~~~~~--------~~~~~~li~~lL~~dp~~R~~~~  285 (373)
T 2r5t_A          235 GLPPFYSRN---------TAEMYDNILNKP-L------QLKPNI--------TNSARHLLEGLLQKDRTKRLGAK  285 (373)
T ss_dssp             SSCTTCCSB---------HHHHHHHHHHSC-C------CCCSSS--------CHHHHHHHHHHTCSSGGGSTTTT
T ss_pred             CCCCCCCCC---------HHHHHHHHHhcc-c------CCCCCC--------CHHHHHHHHHHcccCHHhCCCCC
Confidence            999996521         122222222111 1      111112        25688999999999999999984


No 134
>3nyv_A Calmodulin-domain protein kinase 1; serine/threonine protein kinase, transferase, calcium-bindin binding, EF hand, bumped kinase inhibitor; HET: MSE DTQ; 1.88A {Toxoplasma gondii} PDB: 3i79_A* 3i7b_A* 3n51_A* 3i7c_A* 3sx9_A* 3sxf_A* 3t3u_A* 3t3v_A* 3upx_A* 3upz_A* 3v51_A* 3v5p_A* 3v5t_A* 3ku2_A* 3hx4_A*
Probab=100.00  E-value=1.5e-39  Score=278.43  Aligned_cols=204  Identities=24%  Similarity=0.289  Sum_probs=162.5

Q ss_pred             ccHHHHHHHHHHHHhcCCCcccceeeeeeeCCcceEEEEecCCCCHHHhhcCCCc----hHHHHHHHHHHHhchhhcCCC
Q 044022           11 HTYGSCINNITYAAQMSHNHILKRIGCCLQTPIPILVFQSVEYGTLRDCIFGAPL----PRLKIASDIVNSLAYLHFGFP   86 (241)
Q Consensus        11 ~~~~~~~~e~~~l~~l~h~~iv~~~~~~~~~~~~~lv~e~~~~~sL~~~l~~~~~----~~~~~~~~i~~~l~~lh~~~~   86 (241)
                      ...+.+.+|++++++++||||+++++++...+..++|+||+.+++|.+++.....    ....++.|++.||.|||   +
T Consensus        68 ~~~~~~~~E~~~l~~l~hpniv~~~~~~~~~~~~~lv~e~~~~~~L~~~~~~~~~~~~~~~~~i~~qi~~~l~~lH---~  144 (484)
T 3nyv_A           68 TDKESLLREVQLLKQLDHPNIMKLYEFFEDKGYFYLVGEVYTGGELFDEIISRKRFSEVDAARIIRQVLSGITYMH---K  144 (484)
T ss_dssp             SCHHHHHHHHHHHTTCCCTTBCCEEEEEECSSEEEEEECCCCSCBHHHHHHTCSCCBHHHHHHHHHHHHHHHHHHH---H
T ss_pred             hHHHHHHHHHHHHHhCCCCCCCcEEEEEEeCCEEEEEEecCCCCCHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHH---H
Confidence            4577899999999999999999999999999999999999999999998865432    46789999999999999   8


Q ss_pred             CCceeccCCCCCeee---cCCCCeEEeeccCceecCCCCcceeecccccCCCccCcccccccCCCcchhhHHHHHHHHHH
Q 044022           87 RPIVLRNFKTQNILF---NEENVAKWFDFLLSISIPEGETHITTDRVIGTRGYSAPEYISICVLNEKSNVFSFGAFLFEL  163 (241)
Q Consensus        87 ~~ivh~dl~~~nil~---~~~~~~~l~df~~~~~~~~~~~~~~~~~~~~~~~~~aPE~~~~~~~~~~~Di~s~G~~~~~~  163 (241)
                      ++++||||||+|||+   +.++.+||+|||++.........   ....||+.|+|||++.+ .++.++||||+|+++|+|
T Consensus       145 ~~ivH~Dlkp~Nil~~~~~~~~~~kl~Dfg~a~~~~~~~~~---~~~~gt~~y~aPE~~~~-~~~~~~DiwslG~il~~l  220 (484)
T 3nyv_A          145 NKIVHRDLKPENLLLESKSKDANIRIIDFGLSTHFEASKKM---KDKIGTAYYIAPEVLHG-TYDEKCDVWSTGVILYIL  220 (484)
T ss_dssp             TTCCCSCCCGGGEEESSSSTTCCEEECCTTHHHHBCCCCSH---HHHTTGGGTCCHHHHHT-CCCTHHHHHHHHHHHHHH
T ss_pred             CCeeeCCCCHHHEEEecCCCCCcEEEEeeeeeEEccccccc---ccCCCCccccCceeecC-CCCCcceeHHHHHHHHHH
Confidence            999999999999999   56789999999998766544321   33468999999999875 689999999999999999


Q ss_pred             HhcCcccccccccCCCcccchHHHHHHHhhhcccCCCCCCccccCCCchhHHHHHHHHHHHHHHhccCCCCCCCCCCC
Q 044022          164 LAGRIHIWDLLKDTHDHGCFFNEYLKNYLEDKRFTGIPAPIIVQDIPCIEKEQQLHASAQLTLECVNNSPEDRPTMVD  241 (241)
Q Consensus       164 ~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~cl~~~p~~Rpt~~e  241 (241)
                      ++|..||...         ...+...........  ...+.+         ...++.+.+|+.+||+.||++|||++|
T Consensus       221 l~g~~pf~~~---------~~~~~~~~i~~~~~~--~~~~~~---------~~~s~~~~~li~~~L~~dp~~R~s~~e  278 (484)
T 3nyv_A          221 LSGCPPFNGA---------NEYDILKKVEKGKYT--FELPQW---------KKVSESAKDLIRKMLTYVPSMRISARD  278 (484)
T ss_dssp             HHSSCSSCCS---------SHHHHHHHHHHCCCC--CCSGGG---------GGSCHHHHHHHHHHTCSSGGGSCCHHH
T ss_pred             HHCCCCCCCC---------CHHHHHHHHHcCCCC--CCCccc---------ccCCHHHHHHHHHHCCCChhHCcCHHH
Confidence            9999999652         112222222221111  111111         123367899999999999999999853


No 135
>3fdn_A Serine/threonine-protein kinase 6; aurora kinase inhibitors, virtual screening, X-RAY CO- crystal analysis, structure-based drug design (SBDD); HET: MMH; 1.90A {Homo sapiens} SCOP: d.144.1.7 PDB: 3k5u_A* 3m11_A* 2c6e_A* 1muo_A* 2bmc_A* 2j4z_A* 1ol6_A* 3up2_A* 3unz_A* 3uo5_A* 3uo6_A* 3uod_A* 3uoh_A* 3uoj_A* 3uok_A* 3uo4_A* 3uol_A* 3up7_A* 4dea_A* 4deb_A* ...
Probab=100.00  E-value=3.7e-39  Score=257.17  Aligned_cols=200  Identities=20%  Similarity=0.330  Sum_probs=158.4

Q ss_pred             ccHHHHHHHHHHHHhcCCCcccceeeeeeeCCcceEEEEecCCCCHHHhhcCCC----chHHHHHHHHHHHhchhhcCCC
Q 044022           11 HTYGSCINNITYAAQMSHNHILKRIGCCLQTPIPILVFQSVEYGTLRDCIFGAP----LPRLKIASDIVNSLAYLHFGFP   86 (241)
Q Consensus        11 ~~~~~~~~e~~~l~~l~h~~iv~~~~~~~~~~~~~lv~e~~~~~sL~~~l~~~~----~~~~~~~~~i~~~l~~lh~~~~   86 (241)
                      .....+.+|+.++++++||||+++++++...+..++||||+++++|.+++....    .....++.+++.||.|||   +
T Consensus        51 ~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~~~~~~l~~~l~~~~~~~~~~~~~~~~qi~~~l~~LH---~  127 (279)
T 3fdn_A           51 GVEHQLRREVEIQSHLRHPNILRLYGYFHDATRVYLILEYAPLGTVYRELQKLSKFDEQRTATYITELANALSYCH---S  127 (279)
T ss_dssp             TCHHHHHHHHHHHTTCCCTTBCCEEEEEECSSEEEEEECCCTTEEHHHHHHHHSSCCHHHHHHHHHHHHHHHHHHH---T
T ss_pred             hHHHHHHHHHHHHHcCCCCCCcchhheEecCCEEEEEEecCCCCcHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHH---h
Confidence            346678999999999999999999999999999999999999999999886532    246789999999999999   9


Q ss_pred             CCceeccCCCCCeeecCCCCeEEeeccCceecCCCCcceeecccccCCCccCcccccccCCCcchhhHHHHHHHHHHHhc
Q 044022           87 RPIVLRNFKTQNILFNEENVAKWFDFLLSISIPEGETHITTDRVIGTRGYSAPEYISICVLNEKSNVFSFGAFLFELLAG  166 (241)
Q Consensus        87 ~~ivh~dl~~~nil~~~~~~~~l~df~~~~~~~~~~~~~~~~~~~~~~~~~aPE~~~~~~~~~~~Di~s~G~~~~~~~~g  166 (241)
                      .+++|+||||+||+++.++.++|+|||.+........    ....+++.|+|||.+.+..++.++||||||+++|+|++|
T Consensus       128 ~~i~H~dlkp~Nili~~~~~~~l~Dfg~~~~~~~~~~----~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~g  203 (279)
T 3fdn_A          128 KRVIHRDIKPENLLLGSAGELKIADFGWSVHAPSSRR----TDLCGTLDYLPPEMIEGRMHDEKVDLWSLGVLCYEFLVG  203 (279)
T ss_dssp             TTCEECCCCGGGEEECTTSCEEECSCCEESCC------------CCCCTTCCHHHHTTCCCCTTHHHHHHHHHHHHHHHS
T ss_pred             CCEecccCChHhEEEcCCCCEEEEeccccccCCcccc----cccCCCCCccCHhHhccCCCCccchhHhHHHHHHHHHHC
Confidence            9999999999999999999999999998855433221    334689999999999988899999999999999999999


Q ss_pred             CcccccccccCCCcccchHHHHHHHhhhcccCCCCCCccccCCCchhHHHHHHHHHHHHHHhccCCCCCCCCCCC
Q 044022          167 RIHIWDLLKDTHDHGCFFNEYLKNYLEDKRFTGIPAPIIVQDIPCIEKEQQLHASAQLTLECVNNSPEDRPTMVD  241 (241)
Q Consensus       167 ~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~cl~~~p~~Rpt~~e  241 (241)
                      ..||...         ...+......... . .     ...        ..+..+.+++.+||+.||++|||++|
T Consensus       204 ~~p~~~~---------~~~~~~~~~~~~~-~-~-----~~~--------~~~~~~~~li~~~l~~~p~~Rps~~e  254 (279)
T 3fdn_A          204 KPPFEAN---------TYQETYKRISRVE-F-T-----FPD--------FVTEGARDLISRLLKHNPSQRPMLRE  254 (279)
T ss_dssp             SCTTCCS---------SHHHHHHHHHHTC-C-C-----CCT--------TSCHHHHHHHHHHCCSSGGGSCCHHH
T ss_pred             CCCCCCC---------cHHHHHHHHHhCC-C-C-----CCC--------cCCHHHHHHHHHHhccChhhCCCHHH
Confidence            9999541         1112222211111 0 0     111        12256889999999999999999853


No 136
>4eut_A Serine/threonine-protein kinase TBK1; ATP binding, phosphorylation, transferase-transferas inhibitor complex; HET: BX7; 2.60A {Homo sapiens}
Probab=100.00  E-value=2.5e-39  Score=270.50  Aligned_cols=230  Identities=17%  Similarity=0.211  Sum_probs=170.7

Q ss_pred             CcccccccccccHHHHHHHHHHHHhcCCCcccceeeeeeeCC--cceEEEEecCCCCHHHhhcCCC----c---hHHHHH
Q 044022            1 MKFYGHEYHRHTYGSCINNITYAAQMSHNHILKRIGCCLQTP--IPILVFQSVEYGTLRDCIFGAP----L---PRLKIA   71 (241)
Q Consensus         1 iK~~~~~~~~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~~~~--~~~lv~e~~~~~sL~~~l~~~~----~---~~~~~~   71 (241)
                      ||++.........+.+.+|++++++++||||+++++++...+  ..++||||+++|+|.+++....    .   ....++
T Consensus        39 iK~~~~~~~~~~~~~~~~E~~~l~~l~hpnIv~~~~~~~~~~~~~~~lv~e~~~~g~L~~~l~~~~~~~~l~~~~~~~i~  118 (396)
T 4eut_A           39 IKVFNNISFLRPVDVQMREFEVLKKLNHKNIVKLFAIEEETTTRHKVLIMEFCPCGSLYTVLEEPSNAYGLPESEFLIVL  118 (396)
T ss_dssp             EEEECGGGGGSCHHHHHHHHHHHHHCCCTTBCCEEEEEECTTTCCEEEEECCCTTEEHHHHTTSGGGTTCCCHHHHHHHH
T ss_pred             EEEeccccccchHHHHHHHHHHHHhcCCCCCCeEEEeeccCCCCeeEEEEecCCCCCHHHHHHhhhcccCCCHHHHHHHH
Confidence            466665555566788899999999999999999999998655  6799999999999999997642    1   467899


Q ss_pred             HHHHHHhchhhcCCCCCceeccCCCCCeee----cCCCCeEEeeccCceecCCCCcceeecccccCCCccCcccccc---
Q 044022           72 SDIVNSLAYLHFGFPRPIVLRNFKTQNILF----NEENVAKWFDFLLSISIPEGETHITTDRVIGTRGYSAPEYISI---  144 (241)
Q Consensus        72 ~~i~~~l~~lh~~~~~~ivh~dl~~~nil~----~~~~~~~l~df~~~~~~~~~~~~~~~~~~~~~~~~~aPE~~~~---  144 (241)
                      .+++.||.|||   +.+++||||||+|||+    +.++.+||+|||.+.........   ....|++.|+|||++..   
T Consensus       119 ~qi~~aL~~LH---~~~ivH~Dlkp~NIll~~~~~~~~~~kL~DFG~a~~~~~~~~~---~~~~gt~~y~aPE~~~~~~~  192 (396)
T 4eut_A          119 RDVVGGMNHLR---ENGIVHRNIKPGNIMRVIGEDGQSVYKLTDFGAARELEDDEQF---VSLYGTEEYLHPDMYERAVL  192 (396)
T ss_dssp             HHHHHHHHHHH---HTTEECCCCCGGGEEEEECTTSCEEEEECCGGGCEECCCGGGS---SCSSSCCTTCCHHHHHHHCC
T ss_pred             HHHHHHHHHHH---HCCEEECCcCHHHEEEeecCCCceeEEEecCCCceEccCCCcc---ccccCCccccCHHHhhcccc
Confidence            99999999999   8999999999999999    77788999999999876543321   23468999999999865   


Q ss_pred             -----cCCCcchhhHHHHHHHHHHHhcCcccccccccCCCcccchHHHHHHHhhhcccCCC------CCC--ccccCCC-
Q 044022          145 -----CVLNEKSNVFSFGAFLFELLAGRIHIWDLLKDTHDHGCFFNEYLKNYLEDKRFTGI------PAP--IIVQDIP-  210 (241)
Q Consensus       145 -----~~~~~~~Di~s~G~~~~~~~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~------~~~--~~~~~~~-  210 (241)
                           ..++.++||||||+++|+|++|+.||.......     ...+.+............      ...  .+....+ 
T Consensus       193 ~~~~~~~~~~~~DiwSlG~il~el~tg~~Pf~~~~~~~-----~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~  267 (396)
T 4eut_A          193 RKDHQKKYGATVDLWSIGVTFYHAATGSLPFRPFEGPR-----RNKEVMYKIITGKPSGAISGVQKAENGPIDWSGDMPV  267 (396)
T ss_dssp             --CHHHHHHHHHHHHHHHHHHHHHHHSSCSEECTTCTT-----TCHHHHHHHHHSCCTTCCEEEECSTTCCEEEESSCCT
T ss_pred             ccccccCCCcHHHHHHHHHHHHHHHHCCCCCCCCCccc-----chHHHHHHHhcCCCcccchhheeccCCCcccCccCCc
Confidence                 467789999999999999999999996522211     112222222221110000      000  0001111 


Q ss_pred             -chhHHHHHHHHHHHHHHhccCCCCCCCCCCC
Q 044022          211 -CIEKEQQLHASAQLTLECVNNSPEDRPTMVD  241 (241)
Q Consensus       211 -~~~~~~~~~~~~~l~~~cl~~~p~~Rpt~~e  241 (241)
                       ..........+.+++.+||+.||++|||++|
T Consensus       268 ~~~l~~~~~~~l~~ll~~~L~~dP~~R~s~~e  299 (396)
T 4eut_A          268 SCSLSRGLQVLLTPVLANILEADQEKCWGFDQ  299 (396)
T ss_dssp             TCSSCHHHHHHHHHHHHHHSCCCTTTSCCHHH
T ss_pred             ccccchHHHhhchHHHHHhhccChhhhccHHH
Confidence             1112466778999999999999999999853


No 137
>3cok_A Serine/threonine-protein kinase PLK4; POLO-like kinase 4, SAK, STK18, PSI, structural genomics, protein structure initiative; HET: ANP; 2.25A {Homo sapiens}
Probab=100.00  E-value=2.7e-39  Score=257.72  Aligned_cols=201  Identities=19%  Similarity=0.253  Sum_probs=141.0

Q ss_pred             cHHHHHHHHHHHHhcCCCcccceeeeeeeCCcceEEEEecCCCCHHHhhcCCC-----chHHHHHHHHHHHhchhhcCCC
Q 044022           12 TYGSCINNITYAAQMSHNHILKRIGCCLQTPIPILVFQSVEYGTLRDCIFGAP-----LPRLKIASDIVNSLAYLHFGFP   86 (241)
Q Consensus        12 ~~~~~~~e~~~l~~l~h~~iv~~~~~~~~~~~~~lv~e~~~~~sL~~~l~~~~-----~~~~~~~~~i~~~l~~lh~~~~   86 (241)
                      ..+.+.+|++++++++||||+++++++...+..++|+||+++++|.+++....     .....++.+++.||.|||   +
T Consensus        54 ~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~qi~~~l~~lH---~  130 (278)
T 3cok_A           54 MVQRVQNEVKIHCQLKHPSILELYNYFEDSNYVYLVLEMCHNGEMNRYLKNRVKPFSENEARHFMHQIITGMLYLH---S  130 (278)
T ss_dssp             CHHHHHHHHHHHTTBCCTTBCCEEEEEECSSEEEEEEECCTTEEHHHHHHTCSSCCCHHHHHHHHHHHHHHHHHHH---H
T ss_pred             HHHHHHHHHHHHHhCCCCCeEeEEEEEccCCeEEEEEecCCCCcHHHHHhhccCCCCHHHHHHHHHHHHHHHHHHH---H
Confidence            45789999999999999999999999999999999999999999999987642     146789999999999999   8


Q ss_pred             CCceeccCCCCCeeecCCCCeEEeeccCceecCCCCcceeecccccCCCccCcccccccCCCcchhhHHHHHHHHHHHhc
Q 044022           87 RPIVLRNFKTQNILFNEENVAKWFDFLLSISIPEGETHITTDRVIGTRGYSAPEYISICVLNEKSNVFSFGAFLFELLAG  166 (241)
Q Consensus        87 ~~ivh~dl~~~nil~~~~~~~~l~df~~~~~~~~~~~~~~~~~~~~~~~~~aPE~~~~~~~~~~~Di~s~G~~~~~~~~g  166 (241)
                      .+++|+||||+||+++.++.++|+|||.+.........  .....+++.|+|||.+.+..++.++||||||+++|+|++|
T Consensus       131 ~~i~H~dl~p~Nili~~~~~~kl~dfg~~~~~~~~~~~--~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~g  208 (278)
T 3cok_A          131 HGILHRDLTLSNLLLTRNMNIKIADFGLATQLKMPHEK--HYTLCGTPNYISPEIATRSAHGLESDVWSLGCMFYTLLIG  208 (278)
T ss_dssp             TTEECSSCCGGGEEECTTCCEEECCCTTCEECC------------------------------CTHHHHHHHHHHHHHHS
T ss_pred             CCeecCCCCHHHEEEcCCCCEEEEeecceeeccCCCCc--ceeccCCCCcCCcchhcCCCCCchhhHHHHHHHHHHHHhC
Confidence            99999999999999999999999999999866433221  1234688999999999988899999999999999999999


Q ss_pred             CcccccccccCCCcccchHHHHHHHhhhcccCCCCCCccccCCCchhHHHHHHHHHHHHHHhccCCCCCCCCCCC
Q 044022          167 RIHIWDLLKDTHDHGCFFNEYLKNYLEDKRFTGIPAPIIVQDIPCIEKEQQLHASAQLTLECVNNSPEDRPTMVD  241 (241)
Q Consensus       167 ~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~cl~~~p~~Rpt~~e  241 (241)
                      +.||.......         ....    .....   .....        ..+..+.+++.+||+.||++|||++|
T Consensus       209 ~~p~~~~~~~~---------~~~~----~~~~~---~~~~~--------~~~~~~~~li~~~l~~dp~~Rps~~~  259 (278)
T 3cok_A          209 RPPFDTDTVKN---------TLNK----VVLAD---YEMPS--------FLSIEAKDLIHQLLRRNPADRLSLSS  259 (278)
T ss_dssp             SCSSCCCSCC------------------CCSSC---CCCCT--------TSCHHHHHHHHHHSCSSGGGSCCHHH
T ss_pred             CCCCCChhHHH---------HHHH----Hhhcc---cCCcc--------ccCHHHHHHHHHHcccCHhhCCCHHH
Confidence            99996521110         0000    00000   01111        12257889999999999999999753


No 138
>3mwu_A Calmodulin-domain protein kinase 1; serine/threonine protein kinase, transferase, calcium-bindin binding, bumped kinase inhibitor, BKI; HET: BK3; 1.98A {Cryptosporidium parvum} PDB: 3igo_A* 3ncg_A*
Probab=100.00  E-value=2.7e-39  Score=276.94  Aligned_cols=204  Identities=23%  Similarity=0.283  Sum_probs=159.4

Q ss_pred             ccHHHHHHHHHHHHhcCCCcccceeeeeeeCCcceEEEEecCCCCHHHhhcCCC----chHHHHHHHHHHHhchhhcCCC
Q 044022           11 HTYGSCINNITYAAQMSHNHILKRIGCCLQTPIPILVFQSVEYGTLRDCIFGAP----LPRLKIASDIVNSLAYLHFGFP   86 (241)
Q Consensus        11 ~~~~~~~~e~~~l~~l~h~~iv~~~~~~~~~~~~~lv~e~~~~~sL~~~l~~~~----~~~~~~~~~i~~~l~~lh~~~~   86 (241)
                      .....+.+|++++++++||||+++++++...+..++|+||+++++|.+.+....    .....++.+++.||.|||   +
T Consensus        63 ~~~~~~~~E~~~l~~l~hpniv~~~~~~~~~~~~~lv~e~~~~~~L~~~~~~~~~~~~~~~~~i~~qi~~al~~lH---~  139 (486)
T 3mwu_A           63 KDTSTILREVELLKKLDHPNIMKLFEILEDSSSFYIVGELYTGGELFDEIIKRKRFSEHDAARIIKQVFSGITYMH---K  139 (486)
T ss_dssp             SCHHHHHHHHHHHHHCCCTTBCCEEEEEECSSEEEEEECCCCSCBHHHHHHHHSSCCHHHHHHHHHHHHHHHHHHH---H
T ss_pred             hHHHHHHHHHHHHHhCCCCCcCeEEEEEEcCCEEEEEEEcCCCCcHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHH---H
Confidence            456789999999999999999999999999999999999999999998875432    256789999999999999   8


Q ss_pred             CCceeccCCCCCeeec---CCCCeEEeeccCceecCCCCcceeecccccCCCccCcccccccCCCcchhhHHHHHHHHHH
Q 044022           87 RPIVLRNFKTQNILFN---EENVAKWFDFLLSISIPEGETHITTDRVIGTRGYSAPEYISICVLNEKSNVFSFGAFLFEL  163 (241)
Q Consensus        87 ~~ivh~dl~~~nil~~---~~~~~~l~df~~~~~~~~~~~~~~~~~~~~~~~~~aPE~~~~~~~~~~~Di~s~G~~~~~~  163 (241)
                      .+|+||||||+|||++   .++.+||+|||++........   .....||+.|+|||++.+ .++.++||||+|+++|+|
T Consensus       140 ~~ivH~Dlkp~Nil~~~~~~~~~~kl~Dfg~a~~~~~~~~---~~~~~gt~~y~aPE~~~~-~~~~~~DiwslG~il~~l  215 (486)
T 3mwu_A          140 HNIVHRDLKPENILLESKEKDCDIKIIDFGLSTCFQQNTK---MKDRIGTAYYIAPEVLRG-TYDEKCDVWSAGVILYIL  215 (486)
T ss_dssp             TTCCCSCCSGGGEEESSSSTTCCEEECSCSCTTTBCCC-------CCTTGGGGCCGGGGGS-CCCHHHHHHHHHHHHHHH
T ss_pred             CCeEeccCchHHEEEecCCCCCCEEEEECCcCeECCCCCc---cCCCcCCCCCCCHHHhCC-CCCchhhHHHHHHHHHHH
Confidence            9999999999999995   456799999999876544322   233578999999999875 589999999999999999


Q ss_pred             HhcCcccccccccCCCcccchHHHHHHHhhhcccCCCCCCccccCCCchhHHHHHHHHHHHHHHhccCCCCCCCCCCC
Q 044022          164 LAGRIHIWDLLKDTHDHGCFFNEYLKNYLEDKRFTGIPAPIIVQDIPCIEKEQQLHASAQLTLECVNNSPEDRPTMVD  241 (241)
Q Consensus       164 ~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~cl~~~p~~Rpt~~e  241 (241)
                      ++|..||...         ...+............  ..+.+         ...+..+.+++.+||+.||++|||+.|
T Consensus       216 l~g~~pf~~~---------~~~~~~~~i~~~~~~~--~~~~~---------~~~s~~~~~li~~~L~~dp~~R~t~~~  273 (486)
T 3mwu_A          216 LSGTPPFYGK---------NEYDILKRVETGKYAF--DLPQW---------RTISDDAKDLIRKMLTFHPSLRITATQ  273 (486)
T ss_dssp             HHSSCSSCCS---------SHHHHHHHHHHTCCCS--CSGGG---------GGSCHHHHHHHHHHTCSSTTTSCCHHH
T ss_pred             HhCCCCCCCC---------CHHHHHHHHHhCCCCC--CCccc---------CCCCHHHHHHHHHHcCCChhhCcCHHH
Confidence            9999999652         1122222222211110  11111         122357889999999999999999853


No 139
>4agu_A Cyclin-dependent kinase-like 1; transferase, phospho-mimetic; HET: D15; 2.40A {Homo sapiens}
Probab=100.00  E-value=2.9e-39  Score=261.51  Aligned_cols=225  Identities=18%  Similarity=0.203  Sum_probs=157.0

Q ss_pred             cHHHHHHHHHHHHhcCCCcccceeeeeeeCCcceEEEEecCCCCHHHhhcCCCc----hHHHHHHHHHHHhchhhcCCCC
Q 044022           12 TYGSCINNITYAAQMSHNHILKRIGCCLQTPIPILVFQSVEYGTLRDCIFGAPL----PRLKIASDIVNSLAYLHFGFPR   87 (241)
Q Consensus        12 ~~~~~~~e~~~l~~l~h~~iv~~~~~~~~~~~~~lv~e~~~~~sL~~~l~~~~~----~~~~~~~~i~~~l~~lh~~~~~   87 (241)
                      ..+.+.+|++++++++||||+++++++...+..++||||+++++|.+++.....    ....++.+++.||.|||   +.
T Consensus        45 ~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~~~~~~l~~~~~~~~~~~~~~~~~i~~~l~~~l~~lH---~~  121 (311)
T 4agu_A           45 IKKIALREIRMLKQLKHPNLVNLLEVFRRKRRLHLVFEYCDHTVLHELDRYQRGVPEHLVKSITWQTLQAVNFCH---KH  121 (311)
T ss_dssp             HHHHHHHHHHHHHHCCCTTBCCEEEEEEETTEEEEEEECCSEEHHHHHHHTSSCCCHHHHHHHHHHHHHHHHHHH---HT
T ss_pred             HHHHHHHHHHHHHhCCCCCccchhheeecCCeEEEEEEeCCCchHHHHHhhhcCCCHHHHHHHHHHHHHHHHHHH---HC
Confidence            456788999999999999999999999999999999999999999988765422    46789999999999999   89


Q ss_pred             CceeccCCCCCeeecCCCCeEEeeccCceecCCCCcceeecccccCCCccCcccccc-cCCCcchhhHHHHHHHHHHHhc
Q 044022           88 PIVLRNFKTQNILFNEENVAKWFDFLLSISIPEGETHITTDRVIGTRGYSAPEYISI-CVLNEKSNVFSFGAFLFELLAG  166 (241)
Q Consensus        88 ~ivh~dl~~~nil~~~~~~~~l~df~~~~~~~~~~~~~~~~~~~~~~~~~aPE~~~~-~~~~~~~Di~s~G~~~~~~~~g  166 (241)
                      +++|+||||+||+++.++.++|+|||.+..........  ....+++.|+|||.+.+ ..++.++||||||+++|+|++|
T Consensus       122 ~ivH~dlkp~Nil~~~~~~~kl~Dfg~~~~~~~~~~~~--~~~~~~~~y~aPE~~~~~~~~~~~~Di~slG~il~~l~~g  199 (311)
T 4agu_A          122 NCIHRDVKPENILITKHSVIKLCDFGFARLLTGPSDYY--DDEVATRWYRSPELLVGDTQYGPPVDVWAIGCVFAELLSG  199 (311)
T ss_dssp             TEECCCCSGGGEEECTTSCEEECCCTTCEECC--------------GGGCCHHHHHTCSCCCTHHHHHHHHHHHHHHHHS
T ss_pred             CCcCCCCChhhEEEcCCCCEEEeeCCCchhccCccccc--CCCcCCccccChHHHhcCCCCCcchhhHHHHHHHHHHHhC
Confidence            99999999999999999999999999998765432221  23468899999999976 5679999999999999999999


Q ss_pred             CcccccccccCCC------cccchHHHHHHHhhhcccCCCCCCccccCCCc-hhHHHHHHHHHHHHHHhccCCCCCCCCC
Q 044022          167 RIHIWDLLKDTHD------HGCFFNEYLKNYLEDKRFTGIPAPIIVQDIPC-IEKEQQLHASAQLTLECVNNSPEDRPTM  239 (241)
Q Consensus       167 ~~p~~~~~~~~~~------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~l~~~cl~~~p~~Rpt~  239 (241)
                      ..||.........      .+.....................+......+. ......+..+.+++.+||+.||++|||+
T Consensus       200 ~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rpt~  279 (311)
T 4agu_A          200 VPLWPGKSDVDQLYLIRKTLGDLIPRHQQVFSTNQYFSGVKIPDPEDMEPLELKFPNISYPALGLLKGCLHMDPTERLTC  279 (311)
T ss_dssp             SCSCCCSSHHHHHHHHHHHHCSCCHHHHHHHHTCGGGTTCCCCCCSSCCCHHHHCTTCCHHHHHHHHHHCCSSTTTSCCH
T ss_pred             CCCCCCCCHHHHHHHHHHHhcccccccccccccccccccCcCCCccccchhhhhcccccHHHHHHHHHHccCChhhcCCH
Confidence            9999652111000      00000000001111111111111100000000 0001233568899999999999999998


Q ss_pred             CC
Q 044022          240 VD  241 (241)
Q Consensus       240 ~e  241 (241)
                      +|
T Consensus       280 ~e  281 (311)
T 4agu_A          280 EQ  281 (311)
T ss_dssp             HH
T ss_pred             HH
Confidence            53


No 140
>3t9t_A Tyrosine-protein kinase ITK/TSK; kinase domain, alpha/beta, ATP binding, phosphorylation, intracellular, transferase-transferase inhibitor complex; HET: IAQ; 1.65A {Homo sapiens} PDB: 3v5l_A* 3v5j_A* 3v8t_A* 3v8w_A* 1sm2_A* 1snu_A* 1snx_A 3qgw_A* 3qgy_A* 3miy_A* 3mj1_A* 3mj2_A*
Probab=100.00  E-value=3e-39  Score=255.88  Aligned_cols=203  Identities=22%  Similarity=0.321  Sum_probs=160.5

Q ss_pred             cHHHHHHHHHHHHhcCCCcccceeeeeeeCCcceEEEEecCCCCHHHhhcCCC-----chHHHHHHHHHHHhchhhcCCC
Q 044022           12 TYGSCINNITYAAQMSHNHILKRIGCCLQTPIPILVFQSVEYGTLRDCIFGAP-----LPRLKIASDIVNSLAYLHFGFP   86 (241)
Q Consensus        12 ~~~~~~~e~~~l~~l~h~~iv~~~~~~~~~~~~~lv~e~~~~~sL~~~l~~~~-----~~~~~~~~~i~~~l~~lh~~~~   86 (241)
                      ..+.+.+|++++++++||||+++++++...+..++||||+++++|.+++....     .....++.+++.||.|||   +
T Consensus        46 ~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~~~~~~L~~~~~~~~~~~~~~~~~~~~~~i~~~l~~lH---~  122 (267)
T 3t9t_A           46 SEEDFIEEAEVMMKLSHPKLVQLYGVCLEQAPICLVTEFMEHGCLSDYLRTQRGLFAAETLLGMCLDVCEGMAYLE---E  122 (267)
T ss_dssp             CHHHHHHHHHHHHTCCCTTBCCEEEEECSSSSCEEEECCCTTCBHHHHHHHTTTCCCHHHHHHHHHHHHHHHHHHH---H
T ss_pred             CHHHHHHHHHHHHhCCCCCEeeEEEEEccCCCeEEEEeCCCCCcHHHHHhhCcccCCHHHHHHHHHHHHHHHHHHH---h
Confidence            45789999999999999999999999999999999999999999999986542     146789999999999999   8


Q ss_pred             CCceeccCCCCCeeecCCCCeEEeeccCceecCCCCcceeecccccCCCccCcccccccCCCcchhhHHHHHHHHHHHh-
Q 044022           87 RPIVLRNFKTQNILFNEENVAKWFDFLLSISIPEGETHITTDRVIGTRGYSAPEYISICVLNEKSNVFSFGAFLFELLA-  165 (241)
Q Consensus        87 ~~ivh~dl~~~nil~~~~~~~~l~df~~~~~~~~~~~~~~~~~~~~~~~~~aPE~~~~~~~~~~~Di~s~G~~~~~~~~-  165 (241)
                      .+++|+||||+||+++.++.++|+|||.+........ .......++..|+|||.+.+..++.++||||||+++|+|++ 
T Consensus       123 ~~i~H~dl~p~Nili~~~~~~kl~dfg~~~~~~~~~~-~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~~  201 (267)
T 3t9t_A          123 ACVIHRDLAARNCLVGENQVIKVSDFGMTRFVLDDQY-TSSTGTKFPVKWASPEVFSFSRYSSKSDVWSFGVLMWEVFSE  201 (267)
T ss_dssp             TTCCCSSCCGGGEEECGGGCEEECCTTGGGGBCCHHH-HSTTSTTCCGGGCCHHHHHHCCCCHHHHHHHHHHHHHHHHTT
T ss_pred             CCcccCCCchheEEECCCCCEEEcccccccccccccc-cccccccccccccChhhhcCCCccchhchhhhHHHHHHHhcc
Confidence            9999999999999999999999999999876543211 11122346778999999998889999999999999999999 


Q ss_pred             cCcccccccccCCCcccchHHHHHHHhhhcccCCCCCCccccCCCchhHHHHHHHHHHHHHHhccCCCCCCCCCCC
Q 044022          166 GRIHIWDLLKDTHDHGCFFNEYLKNYLEDKRFTGIPAPIIVQDIPCIEKEQQLHASAQLTLECVNNSPEDRPTMVD  241 (241)
Q Consensus       166 g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~cl~~~p~~Rpt~~e  241 (241)
                      |..||....         ..+....... +....     ...        ..+..+.+++.+||+.||++|||+.|
T Consensus       202 g~~p~~~~~---------~~~~~~~i~~-~~~~~-----~~~--------~~~~~l~~li~~~l~~~p~~Rps~~~  254 (267)
T 3t9t_A          202 GKIPYENRS---------NSEVVEDIST-GFRLY-----KPR--------LASTHVYQIMNHCWRERPEDRPAFSR  254 (267)
T ss_dssp             SCCTTTTCC---------HHHHHHHHHT-TCCCC-----CCT--------TSCHHHHHHHHHHTCSSGGGSCCHHH
T ss_pred             CCCCCCCCC---------HHHHHHHHhc-CCcCC-----CCc--------cCcHHHHHHHHHHccCChhhCcCHHH
Confidence            899985421         1222222211 11100     011        12257889999999999999999753


No 141
>3mdy_A Bone morphogenetic protein receptor type-1B; complex (isomerase-protein kinase), receptor serine/threonin structural genomics consortium, SGC; HET: LDN; 2.05A {Homo sapiens} SCOP: d.144.1.7
Probab=100.00  E-value=2.4e-38  Score=258.69  Aligned_cols=215  Identities=21%  Similarity=0.336  Sum_probs=156.5

Q ss_pred             cHHHHHHHHHHHHhc--CCCcccceeeeeeeC----CcceEEEEecCCCCHHHhhcCCCc---hHHHHHHHHHHHhchhh
Q 044022           12 TYGSCINNITYAAQM--SHNHILKRIGCCLQT----PIPILVFQSVEYGTLRDCIFGAPL---PRLKIASDIVNSLAYLH   82 (241)
Q Consensus        12 ~~~~~~~e~~~l~~l--~h~~iv~~~~~~~~~----~~~~lv~e~~~~~sL~~~l~~~~~---~~~~~~~~i~~~l~~lh   82 (241)
                      ....+.+|.+++..+  +||||+++++++...    ...++||||+++|+|.+++.....   ....++.+++.||.|||
T Consensus        72 ~~~~~~~e~~~~~~~~~~h~~i~~~~~~~~~~~~~~~~~~lv~e~~~~g~L~~~l~~~~~~~~~~~~i~~~i~~~l~~lH  151 (337)
T 3mdy_A           72 EEASWFRETEIYQTVLMRHENILGFIAADIKGTGSWTQLYLITDYHENGSLYDYLKSTTLDAKSMLKLAYSSVSGLCHLH  151 (337)
T ss_dssp             GHHHHHHHHHHHTSTTCCCTTBCCEEEEEEESCGGGCEEEEEECCCTTCBHHHHHHHCCBCHHHHHHHHHHHHHHHHHHH
T ss_pred             ccchhhhHHHHHHHHhhcCCCeeeEEEEEccCCCCCCceEEEEeccCCCcHHHHhhccCCCHHHHHHHHHHHHHHHHHHH
Confidence            345566677777665  999999999999887    678999999999999999976543   46789999999999999


Q ss_pred             cCCCC--------CceeccCCCCCeeecCCCCeEEeeccCceecCCCCcce--eecccccCCCccCcccccccCCCcc--
Q 044022           83 FGFPR--------PIVLRNFKTQNILFNEENVAKWFDFLLSISIPEGETHI--TTDRVIGTRGYSAPEYISICVLNEK--  150 (241)
Q Consensus        83 ~~~~~--------~ivh~dl~~~nil~~~~~~~~l~df~~~~~~~~~~~~~--~~~~~~~~~~~~aPE~~~~~~~~~~--  150 (241)
                         +.        +++||||||+|||++.++.+||+|||.+..........  ......||+.|+|||++.+......  
T Consensus       152 ---~~~~~~~~~~~ivH~Dikp~Nill~~~~~~kl~Dfg~a~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~  228 (337)
T 3mdy_A          152 ---TEIFSTQGKPAIAHRDLKSKNILVKKNGTCCIADLGLAVKFISDTNEVDIPPNTRVGTKRYMPPEVLDESLNRNHFQ  228 (337)
T ss_dssp             ---SCBCSTTCBCCEECSCCCGGGEEECTTSCEEECCCTTCEECC---------CCSSCSCGGGCCHHHHTTCCCTTCTH
T ss_pred             ---HhhhhhccCCCEEecccchHHEEECCCCCEEEEeCCCceeeccccccccCCCCCCccCcceeChhhcccccCCcccc
Confidence               77        99999999999999999999999999997664432211  1224578999999999987766654  


Q ss_pred             ----hhhHHHHHHHHHHHhc----------CcccccccccCCCcccchHHHHHHHhhhcccCCCCCCccccCCCchhHHH
Q 044022          151 ----SNVFSFGAFLFELLAG----------RIHIWDLLKDTHDHGCFFNEYLKNYLEDKRFTGIPAPIIVQDIPCIEKEQ  216 (241)
Q Consensus       151 ----~Di~s~G~~~~~~~~g----------~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  216 (241)
                          +||||||+++|+|++|          ..||.......    ..... .................       .....
T Consensus       229 ~~~~~DiwslG~il~el~tg~~~~~~~~~~~~p~~~~~~~~----~~~~~-~~~~~~~~~~~~~~~~~-------~~~~~  296 (337)
T 3mdy_A          229 SYIMADMYSFGLILWEVARRCVSGGIVEEYQLPYHDLVPSD----PSYED-MREIVCIKKLRPSFPNR-------WSSDE  296 (337)
T ss_dssp             HHHHHHHHHHHHHHHHHHTTBCBTTBCCCCCCTTTTTSCSS----CCHHH-HHHHHTTSCCCCCCCGG-------GGGSH
T ss_pred             CccccchHHHHHHHHHHHhccCcccccccccccHhhhcCCC----Cchhh-hHHHHhhhccCcccccc-------chhhH
Confidence                9999999999999999          55554321111    11111 11111111111111111       11236


Q ss_pred             HHHHHHHHHHHhccCCCCCCCCCCC
Q 044022          217 QLHASAQLTLECVNNSPEDRPTMVD  241 (241)
Q Consensus       217 ~~~~~~~l~~~cl~~~p~~Rpt~~e  241 (241)
                      ++..+.+++.+||+.||++|||++|
T Consensus       297 ~~~~l~~li~~~l~~dP~~Rps~~e  321 (337)
T 3mdy_A          297 CLRQMGKLMTECWAHNPASRLTALR  321 (337)
T ss_dssp             HHHHHHHHHHHHSCSSGGGSCCHHH
T ss_pred             HHHHHHHHHHHhhhhChhhCCCHHH
Confidence            6788999999999999999999853


No 142
>3oz6_A Mitogen-activated protein kinase 1, serine/threon protein kinase; structural genomics consortium, SGC, transferase; 2.37A {Cryptosporidium parvum iowa II}
Probab=100.00  E-value=5.4e-39  Score=267.75  Aligned_cols=158  Identities=25%  Similarity=0.306  Sum_probs=132.4

Q ss_pred             ccHHHHHHHHHHHHhcC-CCcccceeeeeeeCC--cceEEEEecCCCCHHHhhcCCCc---hHHHHHHHHHHHhchhhcC
Q 044022           11 HTYGSCINNITYAAQMS-HNHILKRIGCCLQTP--IPILVFQSVEYGTLRDCIFGAPL---PRLKIASDIVNSLAYLHFG   84 (241)
Q Consensus        11 ~~~~~~~~e~~~l~~l~-h~~iv~~~~~~~~~~--~~~lv~e~~~~~sL~~~l~~~~~---~~~~~~~~i~~~l~~lh~~   84 (241)
                      ....++.+|+.+++++. ||||+++++++...+  ..|+||||+. ++|.+++.....   ....++.|++.||.|||  
T Consensus        50 ~~~~~~~~E~~~l~~l~~h~niv~l~~~~~~~~~~~~~lv~e~~~-~~L~~~~~~~~~~~~~~~~i~~qi~~~L~~LH--  126 (388)
T 3oz6_A           50 TDAQRTFREIMILTELSGHENIVNLLNVLRADNDRDVYLVFDYME-TDLHAVIRANILEPVHKQYVVYQLIKVIKYLH--  126 (388)
T ss_dssp             HHHHHHHHHHHHHHHTTTCTTBCCEEEEEECTTSSCEEEEEECCS-EEHHHHHHHTCCCHHHHHHHHHHHHHHHHHHH--
T ss_pred             HHHHHHHHHHHHHHhccCCCCCCeeeeEEecCCCCEEEEEecccC-cCHHHHHHcCCCCHHHHHHHHHHHHHHHHHHH--
Confidence            45677889999999997 999999999997544  6899999997 699998876533   46678999999999999  


Q ss_pred             CCCCceeccCCCCCeeecCCCCeEEeeccCceecCCCCc-------------------ceeecccccCCCccCcccccc-
Q 044022           85 FPRPIVLRNFKTQNILFNEENVAKWFDFLLSISIPEGET-------------------HITTDRVIGTRGYSAPEYISI-  144 (241)
Q Consensus        85 ~~~~ivh~dl~~~nil~~~~~~~~l~df~~~~~~~~~~~-------------------~~~~~~~~~~~~~~aPE~~~~-  144 (241)
                       +.+|+||||||+|||++.++.+||+|||+++.......                   ........||+.|+|||++.+ 
T Consensus       127 -~~~ivHrDlkp~NIll~~~~~~kl~DFG~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~  205 (388)
T 3oz6_A          127 -SGGLLHRDMKPSNILLNAECHVKVADFGLSRSFVNIRRVTNNIPLSINENTENFDDDQPILTDYVATRWYRAPEILLGS  205 (388)
T ss_dssp             -HTTEECCCCCGGGEEECTTCCEEECCCTTCEESSSCCCCCCCGGGCCC---------------CCCGGGGCCHHHHTTC
T ss_pred             -hCCEEeCCCCHHHeEEcCCCCEEecCCcccccccccccccccccccccccccccccccccccCCcccCCcCCHHHhcCC
Confidence             89999999999999999999999999999986533110                   111233578999999999986 


Q ss_pred             cCCCcchhhHHHHHHHHHHHhcCccccc
Q 044022          145 CVLNEKSNVFSFGAFLFELLAGRIHIWD  172 (241)
Q Consensus       145 ~~~~~~~Di~s~G~~~~~~~~g~~p~~~  172 (241)
                      ..++.++|||||||++|+|++|++||..
T Consensus       206 ~~~~~~~DiwSlG~il~ell~g~~pf~~  233 (388)
T 3oz6_A          206 TKYTKGIDMWSLGCILGEILCGKPIFPG  233 (388)
T ss_dssp             CCCCTHHHHHHHHHHHHHHHHSSCSCCC
T ss_pred             CCCCChhhHHHHHHHHHHHHhCCCCCCC
Confidence            5789999999999999999999999954


No 143
>3lij_A Calcium/calmodulin dependent protein kinase with A kinase domain and 4 calmodulin...; transferase, calcium dependent protein kinase; HET: ANP; 1.90A {Cryptosporidium parvum} PDB: 3hzt_A* 3dxn_A 3l19_A*
Probab=100.00  E-value=4.3e-39  Score=276.13  Aligned_cols=204  Identities=23%  Similarity=0.312  Sum_probs=160.2

Q ss_pred             ccHHHHHHHHHHHHhcCCCcccceeeeeeeCCcceEEEEecCCCCHHHhhcCCC----chHHHHHHHHHHHhchhhcCCC
Q 044022           11 HTYGSCINNITYAAQMSHNHILKRIGCCLQTPIPILVFQSVEYGTLRDCIFGAP----LPRLKIASDIVNSLAYLHFGFP   86 (241)
Q Consensus        11 ~~~~~~~~e~~~l~~l~h~~iv~~~~~~~~~~~~~lv~e~~~~~sL~~~l~~~~----~~~~~~~~~i~~~l~~lh~~~~   86 (241)
                      .....+.+|+.++++++||||+++++++...+..++||||+++|+|.+.+....    .....++.+++.||.|||   +
T Consensus        78 ~~~~~~~~E~~~l~~l~hpniv~~~~~~~~~~~~~lv~e~~~~g~L~~~~~~~~~~~~~~~~~i~~qi~~~l~~lH---~  154 (494)
T 3lij_A           78 SSNSKLLEEVAVLKLLDHPNIMKLYDFFEDKRNYYLVMECYKGGELFDEIIHRMKFNEVDAAVIIKQVLSGVTYLH---K  154 (494)
T ss_dssp             CTTHHHHHHHHHHTTCCCTTBCCEEEEEECSSEEEEEEECCCSCBHHHHHHHHSSCCHHHHHHHHHHHHHHHHHHH---H
T ss_pred             hHHHHHHHHHHHHHhCCCCCCCeEEEEEEeCCEEEEEEecCCCCcHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHH---H
Confidence            446778999999999999999999999999999999999999999998875432    256789999999999999   8


Q ss_pred             CCceeccCCCCCeeecCC---CCeEEeeccCceecCCCCcceeecccccCCCccCcccccccCCCcchhhHHHHHHHHHH
Q 044022           87 RPIVLRNFKTQNILFNEE---NVAKWFDFLLSISIPEGETHITTDRVIGTRGYSAPEYISICVLNEKSNVFSFGAFLFEL  163 (241)
Q Consensus        87 ~~ivh~dl~~~nil~~~~---~~~~l~df~~~~~~~~~~~~~~~~~~~~~~~~~aPE~~~~~~~~~~~Di~s~G~~~~~~  163 (241)
                      .+++||||||+|||++..   +.+||+|||++........   .....||+.|+|||++. ..++.++||||+|+++|+|
T Consensus       155 ~~ivH~Dlkp~Nil~~~~~~~~~~kl~DfG~a~~~~~~~~---~~~~~gt~~y~aPE~l~-~~~~~~~DiwslG~il~~l  230 (494)
T 3lij_A          155 HNIVHRDLKPENLLLESKEKDALIKIVDFGLSAVFENQKK---MKERLGTAYYIAPEVLR-KKYDEKCDVWSIGVILFIL  230 (494)
T ss_dssp             TTEECSCCSGGGEEESCSSTTCCEEECCCTTCEECBTTBC---BCCCCSCTTTCCHHHHT-TCBCTHHHHHHHHHHHHHH
T ss_pred             CCceeccCChhhEEEeCCCCCCcEEEEECCCCeECCCCcc---ccccCCCcCeeCHHHHc-ccCCCchhHHHHHHHHHHH
Confidence            999999999999999764   5599999999987654322   23357899999999886 5689999999999999999


Q ss_pred             HhcCcccccccccCCCcccchHHHHHHHhhhcccCCCCCCccccCCCchhHHHHHHHHHHHHHHhccCCCCCCCCCCC
Q 044022          164 LAGRIHIWDLLKDTHDHGCFFNEYLKNYLEDKRFTGIPAPIIVQDIPCIEKEQQLHASAQLTLECVNNSPEDRPTMVD  241 (241)
Q Consensus       164 ~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~cl~~~p~~Rpt~~e  241 (241)
                      ++|..||...         ...+......... . ....+.+ .        ..++.+.+++.+||+.||++|||++|
T Consensus       231 l~g~~pf~~~---------~~~~~~~~i~~~~-~-~~~~~~~-~--------~~s~~~~~li~~~L~~dp~~R~s~~e  288 (494)
T 3lij_A          231 LAGYPPFGGQ---------TDQEILRKVEKGK-Y-TFDSPEW-K--------NVSEGAKDLIKQMLQFDSQRRISAQQ  288 (494)
T ss_dssp             HHSSCSSCCS---------SHHHHHHHHHHTC-C-CCCSGGG-T--------TSCHHHHHHHHHHTCSSTTTSCCHHH
T ss_pred             HhCCCCCCCC---------CHHHHHHHHHhCC-C-CCCchhc-c--------cCCHHHHHHHHHHCCCChhhCccHHH
Confidence            9999999652         1122222222211 1 1111111 1        12357889999999999999999853


No 144
>2rku_A Serine/threonine-protein kinase PLK1; structure of PLK1, selectivity residues, POLO-like K structure based drug design, ATP-binding; HET: R78 TLA SRT TAR; 1.95A {Homo sapiens} PDB: 2v5q_A 2yac_A* 4a4l_A* 4a4o_A* 3kb7_A* 3d5w_A* 3d5u_A* 3d5v_A 3db8_A* 3dbc_A* 3dbd_A* 3d5x_A* 3db6_A* 3dbe_A* 3dbf_A*
Probab=100.00  E-value=1.8e-38  Score=255.01  Aligned_cols=202  Identities=21%  Similarity=0.277  Sum_probs=162.5

Q ss_pred             ccHHHHHHHHHHHHhcCCCcccceeeeeeeCCcceEEEEecCCCCHHHhhcCCC----chHHHHHHHHHHHhchhhcCCC
Q 044022           11 HTYGSCINNITYAAQMSHNHILKRIGCCLQTPIPILVFQSVEYGTLRDCIFGAP----LPRLKIASDIVNSLAYLHFGFP   86 (241)
Q Consensus        11 ~~~~~~~~e~~~l~~l~h~~iv~~~~~~~~~~~~~lv~e~~~~~sL~~~l~~~~----~~~~~~~~~i~~~l~~lh~~~~   86 (241)
                      ...+.+.+|+.++++++||||+++++++...+..++||||+++++|.+++....    .....++.+++.||.|||   +
T Consensus        57 ~~~~~~~~e~~~l~~l~h~~iv~~~~~~~~~~~~~lv~e~~~~~~L~~~~~~~~~~~~~~~~~i~~qi~~~l~~lH---~  133 (294)
T 2rku_A           57 HQREKMSMEISIHRSLAHQHVVGFHGFFEDNDFVFVVLELCRRRSLLELHKRRKALTEPEARYYLRQIVLGCQYLH---R  133 (294)
T ss_dssp             HHHHHHHHHHHHHHTCCCTTBCCEEEEEECSSEEEEEEECCTTCBHHHHHHHHCSCCHHHHHHHHHHHHHHHHHHH---H
T ss_pred             HHHHHHHHHHHHHHhCCCCCEeeeeeeeccCCEEEEEEecCCCCCHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHH---H
Confidence            346678899999999999999999999999999999999999999999876432    256789999999999999   8


Q ss_pred             CCceeccCCCCCeeecCCCCeEEeeccCceecCCCCcceeecccccCCCccCcccccccCCCcchhhHHHHHHHHHHHhc
Q 044022           87 RPIVLRNFKTQNILFNEENVAKWFDFLLSISIPEGETHITTDRVIGTRGYSAPEYISICVLNEKSNVFSFGAFLFELLAG  166 (241)
Q Consensus        87 ~~ivh~dl~~~nil~~~~~~~~l~df~~~~~~~~~~~~~~~~~~~~~~~~~aPE~~~~~~~~~~~Di~s~G~~~~~~~~g  166 (241)
                      .+++|+||||+||+++.++.++|+|||.+.........  .....+++.|+|||.+.+..++.++||||||+++|+|++|
T Consensus       134 ~~i~H~dl~p~Nil~~~~~~~kl~dfg~~~~~~~~~~~--~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~~l~~l~~g  211 (294)
T 2rku_A          134 NRVIHRDLKLGNLFLNEDLEVKIGDFGLATKVEYDGER--KKVLCGTPNYIAPEVLSKKGHSFEVDVWSIGCIMYTLLVG  211 (294)
T ss_dssp             TTEECCCCCGGGEEECTTCCEEECCCTTCEECCSTTCC--BCCCCSCCSSCCHHHHTTSCBCTHHHHHHHHHHHHHHHHS
T ss_pred             CCccccCCChHhEEEcCCCCEEEEeccCceecccCccc--cccccCCCCcCCcchhccCCCCchhhHHHHHHHHHHHHhC
Confidence            99999999999999999999999999999876533221  2334688999999999988899999999999999999999


Q ss_pred             CcccccccccCCCcccchHHHHHHHhhhcccCCCCCCccccCCCchhHHHHHHHHHHHHHHhccCCCCCCCCCCC
Q 044022          167 RIHIWDLLKDTHDHGCFFNEYLKNYLEDKRFTGIPAPIIVQDIPCIEKEQQLHASAQLTLECVNNSPEDRPTMVD  241 (241)
Q Consensus       167 ~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~cl~~~p~~Rpt~~e  241 (241)
                      +.||....         ..+......... . .     ....        .+..+.+++.+||+.||++|||++|
T Consensus       212 ~~p~~~~~---------~~~~~~~~~~~~-~-~-----~~~~--------~~~~~~~li~~~l~~~p~~Rps~~~  262 (294)
T 2rku_A          212 KPPFETSC---------LKETYLRIKKNE-Y-S-----IPKH--------INPVAASLIQKMLQTDPTARPTINE  262 (294)
T ss_dssp             SCTTCCSS---------HHHHHHHHHTTC-C-C-----CCTT--------SCHHHHHHHHHHTCSSGGGSCCGGG
T ss_pred             CCCCCCCC---------HHHHHHHHhhcc-C-C-----Cccc--------cCHHHHHHHHHHcccChhhCcCHHH
Confidence            99995421         111111111111 0 0     1111        1256889999999999999999875


No 145
>1t4h_A Serine/threonine-protein kinase WNK1; protein serine/threonine kinase, transferase; 1.80A {Rattus norvegicus} PDB: 3fpq_A
Probab=100.00  E-value=9.6e-39  Score=256.10  Aligned_cols=202  Identities=17%  Similarity=0.249  Sum_probs=156.8

Q ss_pred             ccHHHHHHHHHHHHhcCCCcccceeeeeee----CCcceEEEEecCCCCHHHhhcCCC----chHHHHHHHHHHHhchhh
Q 044022           11 HTYGSCINNITYAAQMSHNHILKRIGCCLQ----TPIPILVFQSVEYGTLRDCIFGAP----LPRLKIASDIVNSLAYLH   82 (241)
Q Consensus        11 ~~~~~~~~e~~~l~~l~h~~iv~~~~~~~~----~~~~~lv~e~~~~~sL~~~l~~~~----~~~~~~~~~i~~~l~~lh   82 (241)
                      ...+.+.+|+.++++++||||+++++++..    ....++||||+++++|.+++....    .....++.+++.||.|||
T Consensus        67 ~~~~~~~~e~~~l~~l~h~~iv~~~~~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~qi~~~l~~lH  146 (290)
T 1t4h_A           67 SERQRFKEEAEMLKGLQHPNIVRFYDSWESTVKGKKCIVLVTELMTSGTLKTYLKRFKVMKIKVLRSWCRQILKGLQFLH  146 (290)
T ss_dssp             HHHHHHHHHHHHHTTCCCTTBCCEEEEEEEESSSCEEEEEEEECCCSCBHHHHHHHHSSCCHHHHHHHHHHHHHHHHHHH
T ss_pred             HHHHHHHHHHHHHHhCCCCCeeeeeeeeccccCCCceEEEEEEecCCCCHHHHHHHccCCCHHHHHHHHHHHHHHHHHHH
Confidence            456778999999999999999999999875    346899999999999999987532    246789999999999999


Q ss_pred             cCCCCC--ceeccCCCCCeeec-CCCCeEEeeccCceecCCCCcceeecccccCCCccCcccccccCCCcchhhHHHHHH
Q 044022           83 FGFPRP--IVLRNFKTQNILFN-EENVAKWFDFLLSISIPEGETHITTDRVIGTRGYSAPEYISICVLNEKSNVFSFGAF  159 (241)
Q Consensus        83 ~~~~~~--ivh~dl~~~nil~~-~~~~~~l~df~~~~~~~~~~~~~~~~~~~~~~~~~aPE~~~~~~~~~~~Di~s~G~~  159 (241)
                         +.+  ++|+||||+||+++ .++.++|+|||.+........    ....+++.|+|||.+. ..++.++||||||++
T Consensus       147 ---~~~~~i~H~dikp~Nil~~~~~~~~kl~Dfg~~~~~~~~~~----~~~~~t~~y~aPE~~~-~~~~~~~Di~slG~~  218 (290)
T 1t4h_A          147 ---TRTPPIIHRDLKCDNIFITGPTGSVKIGDLGLATLKRASFA----KAVIGTPEFMAPEMYE-EKYDESVDVYAFGMC  218 (290)
T ss_dssp             ---TSSSCCCCSCCCGGGEEESSTTSCEEECCTTGGGGCCTTSB----EESCSSCCCCCGGGGG-TCCCTHHHHHHHHHH
T ss_pred             ---cCCCCEEECCCCHHHEEEECCCCCEEEeeCCCccccccccc----ccccCCcCcCCHHHHh-ccCCCcchHHHHHHH
Confidence               888  99999999999997 789999999999865443322    2346899999999887 458999999999999


Q ss_pred             HHHHHhcCcccccccccCCCcccchHHHHHHHhhhcccCCCCCCccccCCCchhHHHHHHHHHHHHHHhccCCCCCCCCC
Q 044022          160 LFELLAGRIHIWDLLKDTHDHGCFFNEYLKNYLEDKRFTGIPAPIIVQDIPCIEKEQQLHASAQLTLECVNNSPEDRPTM  239 (241)
Q Consensus       160 ~~~~~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~cl~~~p~~Rpt~  239 (241)
                      +|+|++|+.||.....        ......... .+    .........        .++.+.+++.+||+.||++|||+
T Consensus       219 l~~l~~g~~pf~~~~~--------~~~~~~~~~-~~----~~~~~~~~~--------~~~~l~~li~~~l~~dp~~Rps~  277 (290)
T 1t4h_A          219 MLEMATSEYPYSECQN--------AAQIYRRVT-SG----VKPASFDKV--------AIPEVKEIIEGCIRQNKDERYSI  277 (290)
T ss_dssp             HHHHHHSSCTTTTCSS--------HHHHHHHHT-TT----CCCGGGGGC--------CCHHHHHHHHHHSCSSGGGSCCH
T ss_pred             HHHHHhCCCCCCCcCc--------HHHHHHHHh-cc----CCccccCCC--------CCHHHHHHHHHHccCChhhCCCH
Confidence            9999999999954211        111111111 11    111111111        12568999999999999999998


Q ss_pred             CC
Q 044022          240 VD  241 (241)
Q Consensus       240 ~e  241 (241)
                      +|
T Consensus       278 ~e  279 (290)
T 1t4h_A          278 KD  279 (290)
T ss_dssp             HH
T ss_pred             HH
Confidence            53


No 146
>4aaa_A Cyclin-dependent kinase-like 2; transferase, phospho-mimetic; HET: DKI; 1.53A {Homo sapiens} PDB: 4bbm_A*
Probab=100.00  E-value=3.8e-39  Score=263.20  Aligned_cols=226  Identities=20%  Similarity=0.292  Sum_probs=159.5

Q ss_pred             ccHHHHHHHHHHHHhcCCCcccceeeeeeeCCcceEEEEecCCCCHHHhhcCCC----chHHHHHHHHHHHhchhhcCCC
Q 044022           11 HTYGSCINNITYAAQMSHNHILKRIGCCLQTPIPILVFQSVEYGTLRDCIFGAP----LPRLKIASDIVNSLAYLHFGFP   86 (241)
Q Consensus        11 ~~~~~~~~e~~~l~~l~h~~iv~~~~~~~~~~~~~lv~e~~~~~sL~~~l~~~~----~~~~~~~~~i~~~l~~lh~~~~   86 (241)
                      ...+.+.+|++++++++||||+++++++...+..++||||+++++|.+++....    .....++.+++.||.|||   +
T Consensus        66 ~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~lv~e~~~~~~l~~~~~~~~~~~~~~~~~~~~qi~~~l~~LH---~  142 (331)
T 4aaa_A           66 MVKKIAMREIKLLKQLRHENLVNLLEVCKKKKRWYLVFEFVDHTILDDLELFPNGLDYQVVQKYLFQIINGIGFCH---S  142 (331)
T ss_dssp             HHHHHHHHHHHHHHHCCCTTBCCEEEEEEETTEEEEEEECCSEEHHHHHHHSTTCCCHHHHHHHHHHHHHHHHHHH---H
T ss_pred             HHHHHHHHHHHHHhhCCCCCEeeEEEEeecCCEEEEEEecCCcchHHHHHhhccCCCHHHHHHHHHHHHHHHHHHH---H
Confidence            345668899999999999999999999999999999999999999988765432    246789999999999999   8


Q ss_pred             CCceeccCCCCCeeecCCCCeEEeeccCceecCCCCcceeecccccCCCccCccccccc-CCCcchhhHHHHHHHHHHHh
Q 044022           87 RPIVLRNFKTQNILFNEENVAKWFDFLLSISIPEGETHITTDRVIGTRGYSAPEYISIC-VLNEKSNVFSFGAFLFELLA  165 (241)
Q Consensus        87 ~~ivh~dl~~~nil~~~~~~~~l~df~~~~~~~~~~~~~~~~~~~~~~~~~aPE~~~~~-~~~~~~Di~s~G~~~~~~~~  165 (241)
                      .+++|+||||+||+++.++.++|+|||.+.........  .....+++.|+|||.+.+. .++.++||||||+++|+|++
T Consensus       143 ~~ivH~dlkp~Nil~~~~~~~kl~Dfg~~~~~~~~~~~--~~~~~~t~~y~aPE~~~~~~~~~~~~Di~slG~il~~l~~  220 (331)
T 4aaa_A          143 HNIIHRDIKPENILVSQSGVVKLCDFGFARTLAAPGEV--YDDEVATRWYRAPELLVGDVKYGKAVDVWAIGCLVTEMFM  220 (331)
T ss_dssp             TTCCCCCCCGGGEEECTTSCEEECCCTTC--------------CCCCCTTCCHHHHTTCTTCCTHHHHHHHHHHHHHHHH
T ss_pred             CCEEccCcChheEEEcCCCcEEEEeCCCceeecCCccc--cCCCcCCccccCcccccCCCCcchHHHHHHHHHHHHHHHh
Confidence            99999999999999999999999999999765433221  1234688999999999865 68899999999999999999


Q ss_pred             cCcccccccccCCC------cccchHHHHHHHhhhcccCCCCCCccccCCCch-hHHHHHHHHHHHHHHhccCCCCCCCC
Q 044022          166 GRIHIWDLLKDTHD------HGCFFNEYLKNYLEDKRFTGIPAPIIVQDIPCI-EKEQQLHASAQLTLECVNNSPEDRPT  238 (241)
Q Consensus       166 g~~p~~~~~~~~~~------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~l~~~cl~~~p~~Rpt  238 (241)
                      |+.||.........      .+.....................+......+.. .....++.+.+|+.+||+.||++|||
T Consensus       221 g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~~L~~dP~~Rpt  300 (331)
T 4aaa_A          221 GEPLFPGDSDIDQLYHIMMCLGNLIPRHQELFNKNPVFAGVRLPEIKEREPLERRYPKLSEVVIDLAKKCLHIDPDKRPF  300 (331)
T ss_dssp             SSCSCCCSSHHHHHHHHHHHHCSCCHHHHHHHHHCGGGTTCCCCCCSSCCCHHHHSTTSCHHHHHHHHHHTCSSGGGSCC
T ss_pred             CCCCCCCCCcHHHHHHHHHHhCCCChhhhhHhhhccccccccCccccccchhhhcccchhHHHHHHHHHHhccCcccCCC
Confidence            99999652111000      000000001111111112222222221111100 00123467899999999999999999


Q ss_pred             CCC
Q 044022          239 MVD  241 (241)
Q Consensus       239 ~~e  241 (241)
                      ++|
T Consensus       301 ~~e  303 (331)
T 4aaa_A          301 CAE  303 (331)
T ss_dssp             GGG
T ss_pred             HHH
Confidence            875


No 147
>2owb_A Serine/threonine-protein kinase PLK1; catalytic domain, POLO-like kinase1, transfera; HET: 626; 2.10A {Homo sapiens} PDB: 2ou7_A* 3fc2_A* 3thb_A*
Probab=100.00  E-value=1.4e-38  Score=260.29  Aligned_cols=202  Identities=21%  Similarity=0.277  Sum_probs=162.6

Q ss_pred             ccHHHHHHHHHHHHhcCCCcccceeeeeeeCCcceEEEEecCCCCHHHhhcCCC----chHHHHHHHHHHHhchhhcCCC
Q 044022           11 HTYGSCINNITYAAQMSHNHILKRIGCCLQTPIPILVFQSVEYGTLRDCIFGAP----LPRLKIASDIVNSLAYLHFGFP   86 (241)
Q Consensus        11 ~~~~~~~~e~~~l~~l~h~~iv~~~~~~~~~~~~~lv~e~~~~~sL~~~l~~~~----~~~~~~~~~i~~~l~~lh~~~~   86 (241)
                      ...+.+.+|+.++++++||||+++++++...+..++||||+.+++|.+++....    .....++.+++.||.|||   +
T Consensus        83 ~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~lv~e~~~~~~L~~~~~~~~~l~~~~~~~i~~qi~~aL~~LH---~  159 (335)
T 2owb_A           83 HQREKMSMEISIHRSLAHQHVVGFHGFFEDNDFVFVVLELCRRRSLLELHKRRKALTEPEARYYLRQIVLGCQYLH---R  159 (335)
T ss_dssp             HHHHHHHHHHHHHHTCCCTTBCCEEEEEECSSEEEEEECCCTTCBHHHHHHHHCSCCHHHHHHHHHHHHHHHHHHH---H
T ss_pred             HHHHHHHHHHHHHHhCCCCCCCeEEEEEecCCeEEEEEecCCCCCHHHHHhccCCCCHHHHHHHHHHHHHHHHHHH---H
Confidence            346678899999999999999999999999999999999999999999876432    257789999999999999   8


Q ss_pred             CCceeccCCCCCeeecCCCCeEEeeccCceecCCCCcceeecccccCCCccCcccccccCCCcchhhHHHHHHHHHHHhc
Q 044022           87 RPIVLRNFKTQNILFNEENVAKWFDFLLSISIPEGETHITTDRVIGTRGYSAPEYISICVLNEKSNVFSFGAFLFELLAG  166 (241)
Q Consensus        87 ~~ivh~dl~~~nil~~~~~~~~l~df~~~~~~~~~~~~~~~~~~~~~~~~~aPE~~~~~~~~~~~Di~s~G~~~~~~~~g  166 (241)
                      .+++|+||||+||+++.++.++|+|||.+.........  .....++..|+|||.+.+..++.++||||||+++|+|++|
T Consensus       160 ~~ivH~dlkp~NIl~~~~~~~kl~Dfg~~~~~~~~~~~--~~~~~gt~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~g  237 (335)
T 2owb_A          160 NRVIHRDLKLGNLFLNEDLEVKIGDFGLATKVEYDGER--KKVLCGTPNYIAPEVLSKKGHSFEVDVWSIGCIMYTLLVG  237 (335)
T ss_dssp             TTEECSCCCGGGEEECTTCCEEECCCTTCEECCSTTCC--BCCCCSCCSSCCHHHHHTSCBCTHHHHHHHHHHHHHHHHS
T ss_pred             CCCEecCCCchhEEEcCCCCEEEeeccCceecccCccc--ccccCCCccccCHHHhccCCCCchhhHHHHHHHHHHHHHC
Confidence            99999999999999999999999999999876533221  2334689999999999988899999999999999999999


Q ss_pred             CcccccccccCCCcccchHHHHHHHhhhcccCCCCCCccccCCCchhHHHHHHHHHHHHHHhccCCCCCCCCCCC
Q 044022          167 RIHIWDLLKDTHDHGCFFNEYLKNYLEDKRFTGIPAPIIVQDIPCIEKEQQLHASAQLTLECVNNSPEDRPTMVD  241 (241)
Q Consensus       167 ~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~cl~~~p~~Rpt~~e  241 (241)
                      +.||....         ..+......... . .     +...        .+..+.+++.+||+.||++|||++|
T Consensus       238 ~~pf~~~~---------~~~~~~~~~~~~-~-~-----~~~~--------~~~~~~~li~~~l~~dp~~Rps~~e  288 (335)
T 2owb_A          238 KPPFETSC---------LKETYLRIKKNE-Y-S-----IPKH--------INPVAASLIQKMLQTDPTARPTINE  288 (335)
T ss_dssp             SCTTCCSS---------HHHHHHHHHHTC-C-C-----CCTT--------SCHHHHHHHHHHTCSSGGGSCCGGG
T ss_pred             cCCCCCCC---------HHHHHHHHhcCC-C-C-----CCcc--------CCHHHHHHHHHHccCChhHCcCHHH
Confidence            99995421         111111111111 1 1     1111        1256889999999999999999865


No 148
>1csn_A Casein kinase-1; phosphotransferase; HET: ATP; 2.00A {Schizosaccharomyces pombe} SCOP: d.144.1.7 PDB: 1eh4_A* 2csn_A*
Probab=100.00  E-value=1.1e-38  Score=256.54  Aligned_cols=210  Identities=14%  Similarity=0.077  Sum_probs=161.1

Q ss_pred             cHHHHHHHHHHHHhc-CCCcccceeeeeeeCCcceEEEEecCCCCHHHhhcCCC--c---hHHHHHHHHHHHhchhhcCC
Q 044022           12 TYGSCINNITYAAQM-SHNHILKRIGCCLQTPIPILVFQSVEYGTLRDCIFGAP--L---PRLKIASDIVNSLAYLHFGF   85 (241)
Q Consensus        12 ~~~~~~~e~~~l~~l-~h~~iv~~~~~~~~~~~~~lv~e~~~~~sL~~~l~~~~--~---~~~~~~~~i~~~l~~lh~~~   85 (241)
                      ..+.+.+|+++++++ +|+|++++++++......++||||+ +++|.+++....  .   .+..++.|++.||.|||   
T Consensus        48 ~~~~~~~e~~~~~~l~~~~~i~~~~~~~~~~~~~~lv~e~~-~~~L~~~l~~~~~~~~~~~~~~i~~qi~~~l~~lH---  123 (298)
T 1csn_A           48 DAPQLRDEYRTYKLLAGCTGIPNVYYFGQEGLHNVLVIDLL-GPSLEDLLDLCGRKFSVKTVAMAAKQMLARVQSIH---  123 (298)
T ss_dssp             TSCCHHHHHHHHHHTTTCTTCCCEEEEEEETTEEEEEEECC-CCBHHHHHHHTTTCCCHHHHHHHHHHHHHHHHHHH---
T ss_pred             ccHHHHHHHHHHHHHhcCCCCCeEEeecCCCceeEEEEEec-CCCHHHHHHHhccCCCHHHHHHHHHHHHHHHHHHH---
Confidence            345688999999999 8999999999999999999999999 899999987432  1   57889999999999999   


Q ss_pred             CCCceeccCCCCCeeecCCCC-----eEEeeccCceecCCCCcc-----eeecccccCCCccCcccccccCCCcchhhHH
Q 044022           86 PRPIVLRNFKTQNILFNEENV-----AKWFDFLLSISIPEGETH-----ITTDRVIGTRGYSAPEYISICVLNEKSNVFS  155 (241)
Q Consensus        86 ~~~ivh~dl~~~nil~~~~~~-----~~l~df~~~~~~~~~~~~-----~~~~~~~~~~~~~aPE~~~~~~~~~~~Di~s  155 (241)
                      +.+++||||||+||+++.++.     ++|+|||.+.........     .......||+.|+|||++.+..++.++||||
T Consensus       124 ~~~ivH~Dlkp~NIl~~~~~~~~~~~~kl~Dfg~~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Di~s  203 (298)
T 1csn_A          124 EKSLVYRDIKPDNFLIGRPNSKNANMIYVVDFGMVKFYRDPVTKQHIPYREKKNLSGTARYMSINTHLGREQSRRDDLEA  203 (298)
T ss_dssp             TTTEECCCCCGGGEEECCSSSTTTTCEEECCCTTCEESBCTTTCCBCCCCCCCCCCSCTTTCCHHHHTTCCCCHHHHHHH
T ss_pred             hCCEecCCCCHHHEEeccCCCCCCCeEEEEECccccccccccccccccccCccCCCCCcccCCchhhcCCCCChHHHHHH
Confidence            999999999999999987766     999999999876543221     1123456899999999999889999999999


Q ss_pred             HHHHHHHHHhcCcccccccccCCCcccchHHHHHHHhhhcccCCCCCCccccCCCchhHHHHHHHHHHHHHHhccCCCCC
Q 044022          156 FGAFLFELLAGRIHIWDLLKDTHDHGCFFNEYLKNYLEDKRFTGIPAPIIVQDIPCIEKEQQLHASAQLTLECVNNSPED  235 (241)
Q Consensus       156 ~G~~~~~~~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~cl~~~p~~  235 (241)
                      ||+++|+|++|+.||.......      ..+............  ..+....        ..++.+.+++.+||+.||++
T Consensus       204 lG~il~el~~g~~pf~~~~~~~------~~~~~~~~~~~~~~~--~~~~~~~--------~~~~~l~~li~~~l~~dp~~  267 (298)
T 1csn_A          204 LGHVFMYFLRGSLPWQGLKAAT------NKQKYERIGEKKQST--PLRELCA--------GFPEEFYKYMHYARNLAFDA  267 (298)
T ss_dssp             HHHHHHHHHHSSCTTSSCCSCC------HHHHHHHHHHHHHHS--CHHHHTT--------TSCHHHHHHHHHHHHCCTTC
T ss_pred             HHHHHHHHHcCCCCcchhhccc------cHHHHHHHHhhccCc--cHHHHHh--------hCcHHHHHHHHHHhcCCccc
Confidence            9999999999999996522111      111111111111000  0001111        12367899999999999999


Q ss_pred             CCCCCC
Q 044022          236 RPTMVD  241 (241)
Q Consensus       236 Rpt~~e  241 (241)
                      |||+++
T Consensus       268 RP~~~~  273 (298)
T 1csn_A          268 TPDYDY  273 (298)
T ss_dssp             CCCHHH
T ss_pred             CCCHHH
Confidence            999753


No 149
>2vgo_A Serine/threonine-protein kinase 12-A; nucleotide-binding, serine/threonine-protein kinase, ATP-binding, transferase, coiled coil, cell division, kinase; HET: TPO AD5; 1.7A {Xenopus laevis} PDB: 2bfx_A* 2vgp_A* 3ztx_A* 2vrx_A* 2bfy_A* 4af3_A* 3dj6_A* 3d15_A* 3d2i_A* 3d2k_A* 3d14_A* 3dj5_A* 3dj7_A* 3daj_A* 1ol5_A* 1ol7_A* 2x6d_A* 2x6e_A* 2xng_A* 2dwb_A* ...
Probab=100.00  E-value=1e-38  Score=255.20  Aligned_cols=199  Identities=19%  Similarity=0.231  Sum_probs=161.4

Q ss_pred             cHHHHHHHHHHHHhcCCCcccceeeeeeeCCcceEEEEecCCCCHHHhhcCCC----chHHHHHHHHHHHhchhhcCCCC
Q 044022           12 TYGSCINNITYAAQMSHNHILKRIGCCLQTPIPILVFQSVEYGTLRDCIFGAP----LPRLKIASDIVNSLAYLHFGFPR   87 (241)
Q Consensus        12 ~~~~~~~e~~~l~~l~h~~iv~~~~~~~~~~~~~lv~e~~~~~sL~~~l~~~~----~~~~~~~~~i~~~l~~lh~~~~~   87 (241)
                      ..+.+.+|++++++++||||+++++++...+..++||||+++++|.+++....    .....++.+++.||.|||   +.
T Consensus        57 ~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~qi~~~l~~lH---~~  133 (284)
T 2vgo_A           57 VEHQLRREIEIQSHLRHPNILRMYNYFHDRKRIYLMLEFAPRGELYKELQKHGRFDEQRSATFMEELADALHYCH---ER  133 (284)
T ss_dssp             CHHHHHHHHHHHHTCCCTTBCCEEEEEECSSEEEEEECCCTTEEHHHHHHHHSSCCHHHHHHHHHHHHHHHHHHH---TT
T ss_pred             HHHHHHHHHHHHhcCCCCCEeeEEEEEEcCCEEEEEEEeCCCCcHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHH---HC
Confidence            45778999999999999999999999999999999999999999999886532    246789999999999999   99


Q ss_pred             CceeccCCCCCeeecCCCCeEEeeccCceecCCCCcceeecccccCCCccCcccccccCCCcchhhHHHHHHHHHHHhcC
Q 044022           88 PIVLRNFKTQNILFNEENVAKWFDFLLSISIPEGETHITTDRVIGTRGYSAPEYISICVLNEKSNVFSFGAFLFELLAGR  167 (241)
Q Consensus        88 ~ivh~dl~~~nil~~~~~~~~l~df~~~~~~~~~~~~~~~~~~~~~~~~~aPE~~~~~~~~~~~Di~s~G~~~~~~~~g~  167 (241)
                      +++|+||||+||+++.++.++|+|||.+........    ....+++.|+|||.+.+..++.++||||||+++|+|++|.
T Consensus       134 ~i~H~dl~p~Nil~~~~~~~kl~Dfg~~~~~~~~~~----~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~g~  209 (284)
T 2vgo_A          134 KVIHRDIKPENLLMGYKGELKIADFGWSVHAPSLRR----RTMCGTLDYLPPEMIEGKTHDEKVDLWCAGVLCYEFLVGM  209 (284)
T ss_dssp             TEECCCCSGGGEEECTTCCEEECCCTTCEECSSSCB----CCCCSCGGGCCHHHHTTCCBCTTHHHHHHHHHHHHHHHSS
T ss_pred             CceecCCCHHHEEEcCCCCEEEecccccccCccccc----ccccCCCCcCCHHHhccCCCCcccchhhHHHHHHHHHHCC
Confidence            999999999999999999999999999876544321    3346889999999999888999999999999999999999


Q ss_pred             cccccccccCCCcccchHHHHHHHhhhcccCCCCCCccccCCCchhHHHHHHHHHHHHHHhccCCCCCCCCCCC
Q 044022          168 IHIWDLLKDTHDHGCFFNEYLKNYLEDKRFTGIPAPIIVQDIPCIEKEQQLHASAQLTLECVNNSPEDRPTMVD  241 (241)
Q Consensus       168 ~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~cl~~~p~~Rpt~~e  241 (241)
                      .||....         ..+....... ...      .....        .+..+.+++.+||+.||++|||++|
T Consensus       210 ~pf~~~~---------~~~~~~~~~~-~~~------~~~~~--------~~~~~~~li~~~l~~~p~~Rps~~~  259 (284)
T 2vgo_A          210 PPFDSPS---------HTETHRRIVN-VDL------KFPPF--------LSDGSKDLISKLLRYHPPQRLPLKG  259 (284)
T ss_dssp             CTTCCSS---------HHHHHHHHHT-TCC------CCCTT--------SCHHHHHHHHHHSCSSGGGSCCHHH
T ss_pred             CCCCCCC---------HhHHHHHHhc-ccc------CCCCc--------CCHHHHHHHHHHhhcCHhhCCCHHH
Confidence            9995421         1111111111 110      11111        2256889999999999999999753


No 150
>2vwi_A Serine/threonine-protein kinase OSR1; STE kinase, hypertension, transferase; HET: ANP; 2.15A {Homo sapiens} PDB: 3dak_A*
Probab=100.00  E-value=9.9e-40  Score=263.03  Aligned_cols=222  Identities=21%  Similarity=0.288  Sum_probs=150.7

Q ss_pred             CcccccccccccHHHHHHHHHHHHhcCCCcccceeeeeeeCCcceEEEEecCCCCHHHhhcC--------C----CchHH
Q 044022            1 MKFYGHEYHRHTYGSCINNITYAAQMSHNHILKRIGCCLQTPIPILVFQSVEYGTLRDCIFG--------A----PLPRL   68 (241)
Q Consensus         1 iK~~~~~~~~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~~~~~~~lv~e~~~~~sL~~~l~~--------~----~~~~~   68 (241)
                      ||.+..+......+++.+|++++++++||||+++++++...+..++||||+++++|.+++..        .    .....
T Consensus        45 iK~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~  124 (303)
T 2vwi_A           45 IKRINLEKCQTSMDELLKEIQAMSQCHHPNIVSYYTSFVVKDELWLVMKLLSGGSVLDIIKHIVAKGEHKSGVLDESTIA  124 (303)
T ss_dssp             EECCC----------------CCCCCCCTTBCCEEEEEESSSCEEEEEECCTTCBHHHHHHHHHHTTTTTTCSSCHHHHH
T ss_pred             EEEEEhhhcchhHHHHHHHHHHHhhcCCCCEeeEEEEEeecCCcEEEehhccCCchHHHHHHHhhccccccCCCCHHHHH
Confidence            35555444445567889999999999999999999999999999999999999999998863        1    12467


Q ss_pred             HHHHHHHHHhchhhcCCCCCceeccCCCCCeeecCCCCeEEeeccCceecCCCCcc---eeecccccCCCccCcccccc-
Q 044022           69 KIASDIVNSLAYLHFGFPRPIVLRNFKTQNILFNEENVAKWFDFLLSISIPEGETH---ITTDRVIGTRGYSAPEYISI-  144 (241)
Q Consensus        69 ~~~~~i~~~l~~lh~~~~~~ivh~dl~~~nil~~~~~~~~l~df~~~~~~~~~~~~---~~~~~~~~~~~~~aPE~~~~-  144 (241)
                      .++.+++.||.|||   +.+++|+||||+||+++.++.++|+|||.+.........   .......+++.|+|||.+.+ 
T Consensus       125 ~i~~qi~~~l~~lH---~~~i~H~dl~p~Nil~~~~~~~kl~dfg~~~~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~  201 (303)
T 2vwi_A          125 TILREVLEGLEYLH---KNGQIHRDVKAGNILLGEDGSVQIADFGVSAFLATGGDITRNKVRKTFVGTPCWMAPEVMEQV  201 (303)
T ss_dssp             HHHHHHHHHHHHHH---HTTCCCCCCSGGGEEECTTCCEEECCCHHHHHCC---------------CCCTTCCHHHHHHH
T ss_pred             HHHHHHHHHHHHHH---hCCCCCCCCChhhEEEcCCCCEEEEeccchheeccCCCccchhhhcccCCCccccCHHHhccc
Confidence            89999999999999   899999999999999999999999999998655432111   11223468899999999876 


Q ss_pred             cCCCcchhhHHHHHHHHHHHhcCcccccccccCCCcccchHHHHHHHhhhccc--CCCCCCccccCCCchhHHHHHHHHH
Q 044022          145 CVLNEKSNVFSFGAFLFELLAGRIHIWDLLKDTHDHGCFFNEYLKNYLEDKRF--TGIPAPIIVQDIPCIEKEQQLHASA  222 (241)
Q Consensus       145 ~~~~~~~Di~s~G~~~~~~~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~  222 (241)
                      ..++.++||||||+++|+|++|+.||......        .............  ...........        .+..+.
T Consensus       202 ~~~~~~~Di~slG~il~~l~~g~~pf~~~~~~--------~~~~~~~~~~~~~~~~~~~~~~~~~~--------~~~~~~  265 (303)
T 2vwi_A          202 RGYDFKADIWSFGITAIELATGAAPYHKYPPM--------KVLMLTLQNDPPSLETGVQDKEMLKK--------YGKSFR  265 (303)
T ss_dssp             HCCCTHHHHHHHHHHHHHHHHSSCTTTTSCGG--------GHHHHHHTSSCCCTTC-----CCCCC--------CCHHHH
T ss_pred             cCCCchhhHHHHHHHHHHHHhCCCCCccCchh--------hHHHHHhccCCCccccccccchhhhh--------hhHHHH
Confidence            46889999999999999999999999652211        1111111111000  00111111112        225788


Q ss_pred             HHHHHhccCCCCCCCCCCC
Q 044022          223 QLTLECVNNSPEDRPTMVD  241 (241)
Q Consensus       223 ~l~~~cl~~~p~~Rpt~~e  241 (241)
                      +++.+||+.||++|||++|
T Consensus       266 ~li~~~l~~dp~~Rps~~~  284 (303)
T 2vwi_A          266 KMISLCLQKDPEKRPTAAE  284 (303)
T ss_dssp             HHHHHHCCSSGGGSCCHHH
T ss_pred             HHHHHHccCChhhCcCHHH
Confidence            9999999999999999753


No 151
>2ac3_A MAP kinase-interacting serine/threonine kinase 2; DFD motif, transferase; 2.10A {Homo sapiens} PDB: 2hw7_A* 2ac5_A* 2hw6_A
Probab=100.00  E-value=6.6e-39  Score=259.96  Aligned_cols=227  Identities=19%  Similarity=0.282  Sum_probs=160.3

Q ss_pred             CcccccccccccHHHHHHHHHHHHhc-CCCcccceeeeeeeCCcceEEEEecCCCCHHHhhcCCC----chHHHHHHHHH
Q 044022            1 MKFYGHEYHRHTYGSCINNITYAAQM-SHNHILKRIGCCLQTPIPILVFQSVEYGTLRDCIFGAP----LPRLKIASDIV   75 (241)
Q Consensus         1 iK~~~~~~~~~~~~~~~~e~~~l~~l-~h~~iv~~~~~~~~~~~~~lv~e~~~~~sL~~~l~~~~----~~~~~~~~~i~   75 (241)
                      ||++... .......+.+|++++.++ +||||+++++++...+..++||||+++++|.+++....    .....++.|++
T Consensus        43 vK~~~~~-~~~~~~~~~~E~~~l~~~~~h~~i~~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~i~~qi~  121 (316)
T 2ac3_A           43 VKIIEKQ-PGHIRSRVFREVEMLYQCQGHRNVLELIEFFEEEDRFYLVFEKMRGGSILSHIHKRRHFNELEASVVVQDVA  121 (316)
T ss_dssp             EEEEECC-SSCCHHHHHHHHHHHHHTCCCTTBCCEEEEEEETTEEEEEEECCTTCBHHHHHHHHSSCCHHHHHHHHHHHH
T ss_pred             EEEEeeC-cchhHHHHHHHHHHHHHhcCCCCeeeEEEEEeeCCEEEEEEEcCCCCcHHHHHhccCCCCHHHHHHHHHHHH
Confidence            3555433 234577899999999995 79999999999999999999999999999999986532    24678999999


Q ss_pred             HHhchhhcCCCCCceeccCCCCCeeecCCCC---eEEeeccCceecCCCCc-----ceeecccccCCCccCcccccc---
Q 044022           76 NSLAYLHFGFPRPIVLRNFKTQNILFNEENV---AKWFDFLLSISIPEGET-----HITTDRVIGTRGYSAPEYISI---  144 (241)
Q Consensus        76 ~~l~~lh~~~~~~ivh~dl~~~nil~~~~~~---~~l~df~~~~~~~~~~~-----~~~~~~~~~~~~~~aPE~~~~---  144 (241)
                      .||.|||   +.+++||||||+||+++.++.   +||+|||++........     ........|++.|+|||++..   
T Consensus       122 ~~l~~lH---~~~ivH~dlkp~Nil~~~~~~~~~~kl~Dfg~~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~  198 (316)
T 2ac3_A          122 SALDFLH---NKGIAHRDLKPENILCEHPNQVSPVKICDFDLGSGIKLNGDCSPISTPELLTPCGSAEYMAPEVVEAFSE  198 (316)
T ss_dssp             HHHHHHH---HTTCCCCCCCGGGEEESCSSSSCSEEECCTTCCC-------------------CCSGGGCCHHHHHHTSH
T ss_pred             HHHHHHH---hCCceeCCCCHHHEEEccCCCcCceEEEEccCccccccCCccccccccccccccCCcCccChHHhhcccc
Confidence            9999999   899999999999999988776   99999999875432211     111123458999999999875   


Q ss_pred             --cCCCcchhhHHHHHHHHHHHhcCcccccccccCCCcc--cch---HHHHHHHhhhcccCCCCCCccccCCCchhHHHH
Q 044022          145 --CVLNEKSNVFSFGAFLFELLAGRIHIWDLLKDTHDHG--CFF---NEYLKNYLEDKRFTGIPAPIIVQDIPCIEKEQQ  217 (241)
Q Consensus       145 --~~~~~~~Di~s~G~~~~~~~~g~~p~~~~~~~~~~~~--~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  217 (241)
                        ..++.++||||||+++|+|++|+.||...........  ...   ..........+.. ..+.         ......
T Consensus       199 ~~~~~~~~~DiwslG~il~~l~~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~-~~~~---------~~~~~~  268 (316)
T 2ac3_A          199 EASIYDKRCDLWSLGVILYILLSGYPPFVGRCGSDCGWDRGEACPACQNMLFESIQEGKY-EFPD---------KDWAHI  268 (316)
T ss_dssp             HHHHHTTTHHHHHHHHHHHHHHHSSCSCCCCCCSCSCC----CCHHHHHHHHHHHHHCCC-CCCH---------HHHTTS
T ss_pred             cccCCCcccccHhHHHHHHHHHHCCCCCcccccccccccccccchhHHHHHHHHHhccCc-ccCc---------hhcccC
Confidence              4578999999999999999999999965322110000  000   0111111111111 1110         000122


Q ss_pred             HHHHHHHHHHhccCCCCCCCCCCC
Q 044022          218 LHASAQLTLECVNNSPEDRPTMVD  241 (241)
Q Consensus       218 ~~~~~~l~~~cl~~~p~~Rpt~~e  241 (241)
                      +..+.+|+.+||+.||++|||++|
T Consensus       269 ~~~~~~li~~~L~~dP~~Rps~~e  292 (316)
T 2ac3_A          269 SCAAKDLISKLLVRDAKQRLSAAQ  292 (316)
T ss_dssp             CHHHHHHHHHHSCSSTTTSCCHHH
T ss_pred             CHHHHHHHHHHhhCChhhCCCHHH
Confidence            367899999999999999999853


No 152
>2izr_A Casein kinase I isoform gamma-3; serine/threonine-protein kinase, transferase, ATP- binding, phosphorylation, nucleotide-binding; HET: BRK; 1.3A {Homo sapiens} PDB: 2izs_A* 2izt_A* 2izu_A* 2chl_A* 2c47_A* 2cmw_A*
Probab=100.00  E-value=5e-39  Score=262.42  Aligned_cols=207  Identities=17%  Similarity=0.178  Sum_probs=160.4

Q ss_pred             HHHHHHHHHHHHhc-CCCcccceeeeeeeCCcceEEEEecCCCCHHHhhcCC--Cc---hHHHHHHHHHHHhchhhcCCC
Q 044022           13 YGSCINNITYAAQM-SHNHILKRIGCCLQTPIPILVFQSVEYGTLRDCIFGA--PL---PRLKIASDIVNSLAYLHFGFP   86 (241)
Q Consensus        13 ~~~~~~e~~~l~~l-~h~~iv~~~~~~~~~~~~~lv~e~~~~~sL~~~l~~~--~~---~~~~~~~~i~~~l~~lh~~~~   86 (241)
                      .+.+.+|+++++++ +||||+++++++...+..++||||+ +++|.+++...  ..   .+..++.+++.||.|||   +
T Consensus        48 ~~~~~~E~~~l~~l~~h~~i~~~~~~~~~~~~~~lv~e~~-~~~L~~~~~~~~~~~~~~~~~~i~~qi~~~l~~LH---~  123 (330)
T 2izr_A           48 APQLHLEYRFYKQLGSGDGIPQVYYFGPCGKYNAMVLELL-GPSLEDLFDLCDRTFSLKTVLMIAIQLISRMEYVH---S  123 (330)
T ss_dssp             SCCHHHHHHHHHHHCSCTTSCCEEEEEEETTEEEEEEECC-CCBHHHHHHHTTTCCCHHHHHHHHHHHHHHHHHHH---H
T ss_pred             hHHHHHHHHHHHHhhCCCCCCEEEEEEecCCccEEEEEeC-CCCHHHHHHHcCCCCCHHHHHHHHHHHHHHHHHHH---h
Confidence            45688999999999 9999999999999999999999999 89999998743  22   56789999999999999   8


Q ss_pred             CCceeccCCCCCeeecCCCC-----eEEeeccCceecCCCCcce-----eecccccCCCccCcccccccCCCcchhhHHH
Q 044022           87 RPIVLRNFKTQNILFNEENV-----AKWFDFLLSISIPEGETHI-----TTDRVIGTRGYSAPEYISICVLNEKSNVFSF  156 (241)
Q Consensus        87 ~~ivh~dl~~~nil~~~~~~-----~~l~df~~~~~~~~~~~~~-----~~~~~~~~~~~~aPE~~~~~~~~~~~Di~s~  156 (241)
                      .+++||||||+|||++.++.     ++|+|||++..........     ......||+.|+|||++.+..++.++|||||
T Consensus       124 ~~iiHrDlkp~Nill~~~~~~~~~~~kl~DFg~a~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Di~sl  203 (330)
T 2izr_A          124 KNLIYRDVKPENFLIGRPGNKTQQVIHIIDFALAKEYIDPETKKHIPYREHKSLTGTARYMSINTHLGKEQSRRDDLEAL  203 (330)
T ss_dssp             TTEECCCCCGGGEEECCGGGTCTTSEEECCCTTCEESBCTTTCCBCCCCCCCCCCSCTTTCCHHHHTTCCCCHHHHHHHH
T ss_pred             CCeeccCCCHHHeeeccCCCCCCceEEEEEcccceeeecCCCCccccccccCCcCCCccccChHHHcCCCCCchhHHHHH
Confidence            99999999999999998887     9999999998754432211     1234578999999999999999999999999


Q ss_pred             HHHHHHHHhcCcccccccccCCCcccchHHHHHHHhhhcccCCCCCCccccCCCchhHHHHHHHHHHHHHHhccCCCCCC
Q 044022          157 GAFLFELLAGRIHIWDLLKDTHDHGCFFNEYLKNYLEDKRFTGIPAPIIVQDIPCIEKEQQLHASAQLTLECVNNSPEDR  236 (241)
Q Consensus       157 G~~~~~~~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~cl~~~p~~R  236 (241)
                      |+++|+|++|..||......      ...+............  +......        .. +.+.+++..||+.||.+|
T Consensus       204 G~il~ell~g~~Pf~~~~~~------~~~~~~~~i~~~~~~~--~~~~~~~--------~~-p~~~~li~~~l~~~p~~R  266 (330)
T 2izr_A          204 GHMFMYFLRGSLPWQGLKAD------TLKERYQKIGDTKRAT--PIEVLCE--------NF-PEMATYLRYVRRLDFFEK  266 (330)
T ss_dssp             HHHHHHHHHSSCTTTTCCCS------SHHHHHHHHHHHHHHS--CHHHHTT--------TC-HHHHHHHHHHHHCCTTCC
T ss_pred             HHHHHHHhcCCCCccccccc------cHHHHHHHHHhhhccC--CHHHHhc--------cC-hHHHHHHHHHHhCCCCCC
Confidence            99999999999999653211      1111111111111000  0000000        12 278999999999999999


Q ss_pred             CCCC
Q 044022          237 PTMV  240 (241)
Q Consensus       237 pt~~  240 (241)
                      ||++
T Consensus       267 P~~~  270 (330)
T 2izr_A          267 PDYD  270 (330)
T ss_dssp             CCHH
T ss_pred             CCHH
Confidence            9975


No 153
>2jam_A Calcium/calmodulin-dependent protein kinase type 1G; transferase, kinase, membrane, ATP-binding, prenylation, serine/threonine-protein kinase, alternative splicing; HET: J60; 1.7A {Homo sapiens} PDB: 2jc6_A* 1a06_A
Probab=100.00  E-value=7e-39  Score=258.58  Aligned_cols=203  Identities=22%  Similarity=0.287  Sum_probs=158.8

Q ss_pred             cHHHHHHHHHHHHhcCCCcccceeeeeeeCCcceEEEEecCCCCHHHhhcCCC----chHHHHHHHHHHHhchhhcCCCC
Q 044022           12 TYGSCINNITYAAQMSHNHILKRIGCCLQTPIPILVFQSVEYGTLRDCIFGAP----LPRLKIASDIVNSLAYLHFGFPR   87 (241)
Q Consensus        12 ~~~~~~~e~~~l~~l~h~~iv~~~~~~~~~~~~~lv~e~~~~~sL~~~l~~~~----~~~~~~~~~i~~~l~~lh~~~~~   87 (241)
                      ..+.+.+|+.++++++||||+++++++...+..++||||+++++|.+++....    .....++.+++.||.|||   +.
T Consensus        49 ~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~qi~~~l~~lH---~~  125 (304)
T 2jam_A           49 RDSSLENEIAVLKKIKHENIVTLEDIYESTTHYYLVMQLVSGGELFDRILERGVYTEKDASLVIQQVLSAVKYLH---EN  125 (304)
T ss_dssp             ---HHHHHHHHHHHCCCTTBCCEEEEEECSSEEEEEECCCCSCBHHHHHHHHSCCCHHHHHHHHHHHHHHHHHHH---HT
T ss_pred             chHHHHHHHHHHHhCCCCCeeehhhhcccCCEEEEEEEcCCCccHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHH---HC
Confidence            34678899999999999999999999999999999999999999999875432    246789999999999999   89


Q ss_pred             CceeccCCCCCeee---cCCCCeEEeeccCceecCCCCcceeecccccCCCccCcccccccCCCcchhhHHHHHHHHHHH
Q 044022           88 PIVLRNFKTQNILF---NEENVAKWFDFLLSISIPEGETHITTDRVIGTRGYSAPEYISICVLNEKSNVFSFGAFLFELL  164 (241)
Q Consensus        88 ~ivh~dl~~~nil~---~~~~~~~l~df~~~~~~~~~~~~~~~~~~~~~~~~~aPE~~~~~~~~~~~Di~s~G~~~~~~~  164 (241)
                      +++|+||||+||++   +.++.++|+|||.+........    ....+++.|+|||.+.+..++.++||||||+++|+|+
T Consensus       126 ~i~H~dikp~NIl~~~~~~~~~~kl~Dfg~~~~~~~~~~----~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~  201 (304)
T 2jam_A          126 GIVHRDLKPENLLYLTPEENSKIMITDFGLSKMEQNGIM----STACGTPGYVAPEVLAQKPYSKAVDCWSIGVITYILL  201 (304)
T ss_dssp             TCCCCSCCGGGCEESSSSTTCCEEBCSCSTTCCCCCBTT----HHHHSCCCBCCTTTBSSCSCCHHHHHHHHHHHHHHHH
T ss_pred             CccccCCCHHHEEEecCCCCCCEEEccCCcceecCCCcc----ccccCCCCccChHHhccCCCCchhhHHHHHHHHHHHH
Confidence            99999999999999   7889999999999865433221    2345899999999999889999999999999999999


Q ss_pred             hcCcccccccccCCCcccchHHHHHHHhhhcccCCCCCCccccCCCchhHHHHHHHHHHHHHHhccCCCCCCCCCCC
Q 044022          165 AGRIHIWDLLKDTHDHGCFFNEYLKNYLEDKRFTGIPAPIIVQDIPCIEKEQQLHASAQLTLECVNNSPEDRPTMVD  241 (241)
Q Consensus       165 ~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~cl~~~p~~Rpt~~e  241 (241)
                      +|..||....         ..+...... .+.. ... .....        ..+..+.+++.+||+.||++|||++|
T Consensus       202 ~g~~pf~~~~---------~~~~~~~i~-~~~~-~~~-~~~~~--------~~~~~~~~li~~~l~~dp~~Rps~~~  258 (304)
T 2jam_A          202 CGYPPFYEET---------ESKLFEKIK-EGYY-EFE-SPFWD--------DISESAKDFICHLLEKDPNERYTCEK  258 (304)
T ss_dssp             HSSCTTTTSC---------HHHHHHHHH-HCCC-CCC-TTTTT--------TSCHHHHHHHHHHHCSSTTTSCCHHH
T ss_pred             HCCCCCCCCC---------HHHHHHHHH-cCCC-CCC-ccccc--------cCCHHHHHHHHHHcCCChhHCcCHHH
Confidence            9999996521         111122211 1111 111 11111        12257899999999999999999753


No 154
>2acx_A G protein-coupled receptor kinase 6; GRK, G transferase; HET: ANP; 2.60A {Homo sapiens} PDB: 3nyn_A* 3nyo_A*
Probab=100.00  E-value=4e-39  Score=278.35  Aligned_cols=203  Identities=20%  Similarity=0.272  Sum_probs=162.6

Q ss_pred             ccHHHHHHHHHHHHhcCCCcccceeeeeeeCCcceEEEEecCCCCHHHhhcCCC---c---hHHHHHHHHHHHhchhhcC
Q 044022           11 HTYGSCINNITYAAQMSHNHILKRIGCCLQTPIPILVFQSVEYGTLRDCIFGAP---L---PRLKIASDIVNSLAYLHFG   84 (241)
Q Consensus        11 ~~~~~~~~e~~~l~~l~h~~iv~~~~~~~~~~~~~lv~e~~~~~sL~~~l~~~~---~---~~~~~~~~i~~~l~~lh~~   84 (241)
                      .....+.+|++++++++||||+++++++...+..++||||++||+|.+++....   .   ....++.+|+.||.|||  
T Consensus       226 ~~~~~~~~E~~iL~~l~hp~Iv~l~~~~~~~~~l~lVmEy~~gg~L~~~l~~~~~~~l~e~~~~~i~~qIl~aL~yLH--  303 (576)
T 2acx_A          226 KGEAMALNEKQILEKVNSRFVVSLAYAYETKDALCLVLTLMNGGDLKFHIYHMGQAGFPEARAVFYAAEICCGLEDLH--  303 (576)
T ss_dssp             TCHHHHHHHHHHHHHCCCTTBCCEEEEEECSSEEEEEECCCCSCBHHHHHHSSSSCCCCHHHHHHHHHHHHHHHHHHH--
T ss_pred             HHHHHHHHHHHHHHHcCCCCEeeEEEEEeeCCEEEEEEEcCCCCcHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHHH--
Confidence            456778999999999999999999999999999999999999999999886542   1   46788999999999999  


Q ss_pred             CCCCceeccCCCCCeeecCCCCeEEeeccCceecCCCCcceeecccccCCCccCcccccccCCCcchhhHHHHHHHHHHH
Q 044022           85 FPRPIVLRNFKTQNILFNEENVAKWFDFLLSISIPEGETHITTDRVIGTRGYSAPEYISICVLNEKSNVFSFGAFLFELL  164 (241)
Q Consensus        85 ~~~~ivh~dl~~~nil~~~~~~~~l~df~~~~~~~~~~~~~~~~~~~~~~~~~aPE~~~~~~~~~~~Di~s~G~~~~~~~  164 (241)
                       +++|+||||||+|||++.++.+||+|||++.........   ....||+.|+|||++.+..++.++||||||+++|+|+
T Consensus       304 -~~gIvHrDLKPeNILld~~g~vKL~DFGla~~~~~~~~~---~~~~GT~~Y~APEvl~~~~~~~~~DiwSLGvilyeLl  379 (576)
T 2acx_A          304 -RERIVYRDLKPENILLDDHGHIRISDLGLAVHVPEGQTI---KGRVGTVGYMAPEVVKNERYTFSPDWWALGCLLYEMI  379 (576)
T ss_dssp             -HTTEECCCCCGGGEEECTTSCEEECCCTTCEECCTTCCE---ECCCSCGGGCCHHHHTTCEESSHHHHHHHHHHHHHHH
T ss_pred             -HCCEeccCCchheEEEeCCCCeEEEecccceecccCccc---cccCCCccccCHHHHcCCCCCccchHHHHHHHHHHHH
Confidence             899999999999999999999999999999876544321   2347999999999999888999999999999999999


Q ss_pred             hcCcccccccccCCCcccchHHHHHHHhhhcccCCCCCCccccCCCchhHHHHHHHHHHHHHHhccCCCCCCCCC
Q 044022          165 AGRIHIWDLLKDTHDHGCFFNEYLKNYLEDKRFTGIPAPIIVQDIPCIEKEQQLHASAQLTLECVNNSPEDRPTM  239 (241)
Q Consensus       165 ~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~cl~~~p~~Rpt~  239 (241)
                      +|..||......     ....+.. ........      ....        ..+..+.+|+.+||+.||++||++
T Consensus       380 tG~~PF~~~~~~-----~~~~~i~-~~i~~~~~------~~p~--------~~s~~~~dLI~~lL~~dP~~R~g~  434 (576)
T 2acx_A          380 AGQSPFQQRKKK-----IKREEVE-RLVKEVPE------EYSE--------RFSPQARSLCSQLLCKDPAERLGC  434 (576)
T ss_dssp             HSSCSSSCSSSC-----CCHHHHH-HHHHHCCC------CCCT--------TSCHHHHHHHHHHTCSSGGGSTTC
T ss_pred             hCCCCCcccccc-----hhHHHHH-HHhhcccc------cCCc--------cCCHHHHHHHHHhccCCHHHcCCC
Confidence            999999652211     0111111 11111110      1111        122578999999999999999953


No 155
>3kfa_A Tyrosine-protein kinase ABL1; CML, drug resistance, inhibitor, ATP-binding, nucleotide-binding, oncogene, TRAN; HET: B91; 1.22A {Mus musculus} SCOP: d.144.1.7 PDB: 2qoh_A* 3kf4_A* 3k5v_A* 1fpu_A* 1m52_A* 1iep_A* 2hzn_A* 1opj_A* 3ms9_A* 3mss_A* 3ik3_A* 2z60_A* 2e2b_A* 3pyy_A* 3oxz_A* 2g1t_A* 3ue4_A* 3oy3_A* 2hiw_A* 2v7a_A* ...
Probab=100.00  E-value=4.8e-39  Score=257.45  Aligned_cols=203  Identities=20%  Similarity=0.310  Sum_probs=161.7

Q ss_pred             cHHHHHHHHHHHHhcCCCcccceeeeeeeCCcceEEEEecCCCCHHHhhcCCC---c---hHHHHHHHHHHHhchhhcCC
Q 044022           12 TYGSCINNITYAAQMSHNHILKRIGCCLQTPIPILVFQSVEYGTLRDCIFGAP---L---PRLKIASDIVNSLAYLHFGF   85 (241)
Q Consensus        12 ~~~~~~~e~~~l~~l~h~~iv~~~~~~~~~~~~~lv~e~~~~~sL~~~l~~~~---~---~~~~~~~~i~~~l~~lh~~~   85 (241)
                      ..+.+.+|++++++++||||+++++++...+..++||||+++++|.+++....   .   ....++.+++.||.|||   
T Consensus        52 ~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~~~~~v~e~~~~~~L~~~~~~~~~~~~~~~~~~~i~~~i~~~l~~lH---  128 (288)
T 3kfa_A           52 EVEEFLKEAAVMKEIKHPNLVQLLGVCTREPPFYIITEFMTYGNLLDYLRECNRQEVSAVVLLYMATQISSAMEYLE---  128 (288)
T ss_dssp             HHHHHHHHHHHHHHCCCTTBCCEEEEECSSSSEEEEEECCTTEEHHHHHHHCCTTTSCHHHHHHHHHHHHHHHHHHH---
T ss_pred             HHHHHHHHHHHHHhCCCCCEeeEEEEEccCCCEEEEEEcCCCCcHHHHHHhcccCCccHhHHHHHHHHHHHHHHHHH---
Confidence            46789999999999999999999999999999999999999999999986532   1   46788999999999999   


Q ss_pred             CCCceeccCCCCCeeecCCCCeEEeeccCceecCCCCcceeecccccCCCccCcccccccCCCcchhhHHHHHHHHHHHh
Q 044022           86 PRPIVLRNFKTQNILFNEENVAKWFDFLLSISIPEGETHITTDRVIGTRGYSAPEYISICVLNEKSNVFSFGAFLFELLA  165 (241)
Q Consensus        86 ~~~ivh~dl~~~nil~~~~~~~~l~df~~~~~~~~~~~~~~~~~~~~~~~~~aPE~~~~~~~~~~~Di~s~G~~~~~~~~  165 (241)
                      +.+++|+||||+||+++.++.++|+|||.+........ .......+++.|+|||.+.+..++.++||||||+++|+|++
T Consensus       129 ~~~i~H~dikp~Nil~~~~~~~~l~Dfg~~~~~~~~~~-~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~ll~  207 (288)
T 3kfa_A          129 KKNFIHRDLAARNCLVGENHLVKVADFGLSRLMTGDTY-TAHAGAKFPIKWTAPESLAYNKFSIKSDVWAFGVLLWEIAT  207 (288)
T ss_dssp             HHTCCCSCCSGGGEEECGGGCEEECCCCGGGTSCSSSS-EEETTEEECGGGCCHHHHHHCCCCHHHHHHHHHHHHHHHHT
T ss_pred             HCCccCCCCCcceEEEcCCCCEEEccCccceeccCCcc-ccccCCccccCcCChhhhccCCCCchhhHHHHHHHHHHHHh
Confidence            89999999999999999999999999999976654332 22233456788999999998899999999999999999999


Q ss_pred             -cCcccccccccCCCcccchHHHHHHHhhhcccCCCCCCccccCCCchhHHHHHHHHHHHHHHhccCCCCCCCCCCC
Q 044022          166 -GRIHIWDLLKDTHDHGCFFNEYLKNYLEDKRFTGIPAPIIVQDIPCIEKEQQLHASAQLTLECVNNSPEDRPTMVD  241 (241)
Q Consensus       166 -g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~cl~~~p~~Rpt~~e  241 (241)
                       |..||......         .......... ..     ....        ..++.+.+++.+||+.||++|||++|
T Consensus       208 ~g~~p~~~~~~~---------~~~~~~~~~~-~~-----~~~~--------~~~~~l~~li~~~l~~dp~~Rps~~~  261 (288)
T 3kfa_A          208 YGMSPYPGIDLS---------QVYELLEKDY-RM-----ERPE--------GCPEKVYELMRACWQWNPSDRPSFAE  261 (288)
T ss_dssp             TSCCSSTTCCGG---------GHHHHHHTTC-CC-----CCCT--------TCCHHHHHHHHHHTCSSGGGSCCHHH
T ss_pred             CCCCCCCCCCHH---------HHHHHHhccC-CC-----CCCC--------CCCHHHHHHHHHHhCCChhhCcCHHH
Confidence             99998552111         1111111111 10     1111        12257899999999999999999853


No 156
>3p1a_A MYT1 kinase, membrane-associated tyrosine- and threonine-speci inhibitory kinase; structural genomics, structural genomics consortium, SGC; 1.70A {Homo sapiens}
Probab=100.00  E-value=9.2e-39  Score=258.85  Aligned_cols=197  Identities=16%  Similarity=0.117  Sum_probs=150.7

Q ss_pred             cHHHHHHHHHHHHhc-CCCcccceeeeeeeCCcceEEEEecCCCCHHHhhcCCC-----chHHHHHHHHHHHhchhhcCC
Q 044022           12 TYGSCINNITYAAQM-SHNHILKRIGCCLQTPIPILVFQSVEYGTLRDCIFGAP-----LPRLKIASDIVNSLAYLHFGF   85 (241)
Q Consensus        12 ~~~~~~~e~~~l~~l-~h~~iv~~~~~~~~~~~~~lv~e~~~~~sL~~~l~~~~-----~~~~~~~~~i~~~l~~lh~~~   85 (241)
                      ....+.+|+..+.++ +||||++++++|...+..++||||+ +++|.+++....     ..+..++.+++.||.|||   
T Consensus        99 ~~~~~~~e~~~~~~~~~h~~iv~l~~~~~~~~~~~lv~e~~-~~~L~~~~~~~~~~l~~~~~~~i~~qi~~aL~~LH---  174 (311)
T 3p1a_A           99 DRARKLAEVGSHEKVGQHPCCVRLEQAWEEGGILYLQTELC-GPSLQQHCEAWGASLPEAQVWGYLRDTLLALAHLH---  174 (311)
T ss_dssp             HHHHHHHHHHHHHHHCCCTTBCCEEEEEEETTEEEEEEECC-CCBHHHHHHHHCSCCCHHHHHHHHHHHHHHHHHHH---
T ss_pred             HHHHHHHHHHHHHHhcCCCcEEEEEEEEEeCCEEEEEEecc-CCCHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHH---
Confidence            344566677666666 9999999999999999999999999 579988875432     146789999999999999   


Q ss_pred             CCCceeccCCCCCeeecCCCCeEEeeccCceecCCCCcceeecccccCCCccCcccccccCCCcchhhHHHHHHHHHHHh
Q 044022           86 PRPIVLRNFKTQNILFNEENVAKWFDFLLSISIPEGETHITTDRVIGTRGYSAPEYISICVLNEKSNVFSFGAFLFELLA  165 (241)
Q Consensus        86 ~~~ivh~dl~~~nil~~~~~~~~l~df~~~~~~~~~~~~~~~~~~~~~~~~~aPE~~~~~~~~~~~Di~s~G~~~~~~~~  165 (241)
                      +.+++||||||+|||++.++.+||+|||++........   .....||+.|+|||++.+ .++.++||||||+++|+|++
T Consensus       175 ~~~ivH~Dikp~NIll~~~~~~kl~DFG~a~~~~~~~~---~~~~~gt~~y~aPE~~~~-~~~~~~DiwslG~il~el~~  250 (311)
T 3p1a_A          175 SQGLVHLDVKPANIFLGPRGRCKLGDFGLLVELGTAGA---GEVQEGDPRYMAPELLQG-SYGTAADVFSLGLTILEVAC  250 (311)
T ss_dssp             HTTEECCCCSGGGEEECGGGCEEECCCTTCEECC---------CCCCCGGGCCGGGGGT-CCSTHHHHHHHHHHHHHHHH
T ss_pred             HCCEecCCCCHHHEEECCCCCEEEccceeeeecccCCC---CcccCCCccccCHhHhcC-CCCchhhHHHHHHHHHHHHh
Confidence            89999999999999999999999999999876644322   233468999999999875 78999999999999999999


Q ss_pred             cCcccccccccCCCcccchHHHHHHHhhhcccCCCCCCccccCCCchhHHHHHHHHHHHHHHhccCCCCCCCCCCC
Q 044022          166 GRIHIWDLLKDTHDHGCFFNEYLKNYLEDKRFTGIPAPIIVQDIPCIEKEQQLHASAQLTLECVNNSPEDRPTMVD  241 (241)
Q Consensus       166 g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~cl~~~p~~Rpt~~e  241 (241)
                      |..|+....            ..... ..+    ...+....        ..++.+.+++.+||+.||++|||++|
T Consensus       251 g~~~~~~~~------------~~~~~-~~~----~~~~~~~~--------~~~~~l~~li~~~L~~dP~~Rpt~~e  301 (311)
T 3p1a_A          251 NMELPHGGE------------GWQQL-RQG----YLPPEFTA--------GLSSELRSVLVMMLEPDPKLRATAEA  301 (311)
T ss_dssp             TCCCCSSHH------------HHHHH-TTT----CCCHHHHT--------TSCHHHHHHHHHHSCSSTTTSCCHHH
T ss_pred             CCCCCCCcc------------HHHHH-hcc----CCCccccc--------CCCHHHHHHHHHHcCCChhhCcCHHH
Confidence            976654310            00111 111    11111111        22367899999999999999999853


No 157
>1cm8_A Phosphorylated MAP kinase P38-gamma; phosphorylation, transferase; HET: TPO PTR ANP; 2.40A {Homo sapiens} SCOP: d.144.1.7
Probab=100.00  E-value=1.4e-38  Score=263.35  Aligned_cols=153  Identities=20%  Similarity=0.251  Sum_probs=133.6

Q ss_pred             ccHHHHHHHHHHHHhcCCCcccceeeeeeeCC------cceEEEEecCCCCHHHhhcCCCc---hHHHHHHHHHHHhchh
Q 044022           11 HTYGSCINNITYAAQMSHNHILKRIGCCLQTP------IPILVFQSVEYGTLRDCIFGAPL---PRLKIASDIVNSLAYL   81 (241)
Q Consensus        11 ~~~~~~~~e~~~l~~l~h~~iv~~~~~~~~~~------~~~lv~e~~~~~sL~~~l~~~~~---~~~~~~~~i~~~l~~l   81 (241)
                      ...+++.+|++++++++||||+++++++...+      ..++||||+ +++|.+++.....   ....++.|++.||.||
T Consensus        66 ~~~~~~~~E~~~l~~l~hpnIv~l~~~~~~~~~~~~~~~~~lv~e~~-~~~L~~~~~~~~l~~~~~~~~~~qi~~~L~~L  144 (367)
T 1cm8_A           66 LFAKRAYRELRLLKHMRHENVIGLLDVFTPDETLDDFTDFYLVMPFM-GTDLGKLMKHEKLGEDRIQFLVYQMLKGLRYI  144 (367)
T ss_dssp             HHHHHHHHHHHHHHHCCBTTBCCCSEEECSCSSTTTCCCCEEEEECC-SEEHHHHHHHCCCCHHHHHHHHHHHHHHHHHH
T ss_pred             HHHHHHHHHHHHHHhCCCcCCCCceeeEecCCccccCceEEEEEecC-CCCHHHHHhcCCCCHHHHHHHHHHHHHHHHHH
Confidence            34567899999999999999999999998653      469999999 7899999876433   4677899999999999


Q ss_pred             hcCCCCCceeccCCCCCeeecCCCCeEEeeccCceecCCCCcceeecccccCCCccCcccccc-cCCCcchhhHHHHHHH
Q 044022           82 HFGFPRPIVLRNFKTQNILFNEENVAKWFDFLLSISIPEGETHITTDRVIGTRGYSAPEYISI-CVLNEKSNVFSFGAFL  160 (241)
Q Consensus        82 h~~~~~~ivh~dl~~~nil~~~~~~~~l~df~~~~~~~~~~~~~~~~~~~~~~~~~aPE~~~~-~~~~~~~Di~s~G~~~  160 (241)
                      |   +.+++||||||+||+++.++.+||+|||++.......     ....+|+.|+|||++.+ ..++.++||||+||++
T Consensus       145 H---~~~ivH~Dlkp~NIll~~~~~~kl~Dfg~a~~~~~~~-----~~~~~t~~y~aPE~~~~~~~~~~~~DiwslG~il  216 (367)
T 1cm8_A          145 H---AAGIIHRDLKPGNLAVNEDCELKILDFGLARQADSEM-----TGYVVTRWYRAPEVILNWMRYTQTVDIWSVGCIM  216 (367)
T ss_dssp             H---HTTEECCCCCGGGEEECTTCCEEECCCTTCEECCSSC-----CSSCSCGGGCCTHHHHTTTCCCTTHHHHHHHHHH
T ss_pred             H---HCCccccCcCHHHEEEcCCCCEEEEeeeccccccccc-----CcCcCCCCcCCHHHHhCCCCCChhhhHHHHHHHH
Confidence            9   8999999999999999999999999999998754322     33468999999999887 6789999999999999


Q ss_pred             HHHHhcCccccc
Q 044022          161 FELLAGRIHIWD  172 (241)
Q Consensus       161 ~~~~~g~~p~~~  172 (241)
                      |+|++|+.||..
T Consensus       217 ~ell~g~~pf~~  228 (367)
T 1cm8_A          217 AEMITGKTLFKG  228 (367)
T ss_dssp             HHHHHSSCSSCC
T ss_pred             HHHHhCCCCCCC
Confidence            999999999964


No 158
>3q5i_A Protein kinase; CDPK, malaria, phosphotransferase, structural genomics, structural genomic consortium, SGC, transferase; HET: ANP; 2.10A {Plasmodium berghei}
Probab=100.00  E-value=5.7e-39  Score=276.05  Aligned_cols=204  Identities=24%  Similarity=0.264  Sum_probs=161.1

Q ss_pred             ccHHHHHHHHHHHHhcCCCcccceeeeeeeCCcceEEEEecCCCCHHHhhcCCC----chHHHHHHHHHHHhchhhcCCC
Q 044022           11 HTYGSCINNITYAAQMSHNHILKRIGCCLQTPIPILVFQSVEYGTLRDCIFGAP----LPRLKIASDIVNSLAYLHFGFP   86 (241)
Q Consensus        11 ~~~~~~~~e~~~l~~l~h~~iv~~~~~~~~~~~~~lv~e~~~~~sL~~~l~~~~----~~~~~~~~~i~~~l~~lh~~~~   86 (241)
                      ...+.+.+|+.++++++||||+++++++...+..++||||+++|+|.+++....    ..+..++.+++.||.|||   +
T Consensus        88 ~~~~~~~~E~~~l~~l~hpniv~~~~~~~~~~~~~lv~e~~~gg~L~~~l~~~~~~~~~~~~~i~~qi~~~l~~lH---~  164 (504)
T 3q5i_A           88 KFHEEIYNEISLLKSLDHPNIIKLFDVFEDKKYFYLVTEFYEGGELFEQIINRHKFDECDAANIMKQILSGICYLH---K  164 (504)
T ss_dssp             CTHHHHHHHHHHHHTCCCTTBCCEEEEEECSSEEEEEEECCTTCBHHHHHHHHSCCCHHHHHHHHHHHHHHHHHHH---H
T ss_pred             HHHHHHHHHHHHHHhCCCCCCCeEEEEEEcCCEEEEEEecCCCCcHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHH---H
Confidence            346779999999999999999999999999999999999999999999875432    256789999999999999   8


Q ss_pred             CCceeccCCCCCeeecCCC---CeEEeeccCceecCCCCcceeecccccCCCccCcccccccCCCcchhhHHHHHHHHHH
Q 044022           87 RPIVLRNFKTQNILFNEEN---VAKWFDFLLSISIPEGETHITTDRVIGTRGYSAPEYISICVLNEKSNVFSFGAFLFEL  163 (241)
Q Consensus        87 ~~ivh~dl~~~nil~~~~~---~~~l~df~~~~~~~~~~~~~~~~~~~~~~~~~aPE~~~~~~~~~~~Di~s~G~~~~~~  163 (241)
                      .+++||||||+|||++.++   .+||+|||++........   .....||+.|+|||++. ..++.++||||+|+++|+|
T Consensus       165 ~~ivH~Dlkp~Nil~~~~~~~~~~kl~Dfg~a~~~~~~~~---~~~~~gt~~y~aPE~~~-~~~~~~~DiwslG~il~~l  240 (504)
T 3q5i_A          165 HNIVHRDIKPENILLENKNSLLNIKIVDFGLSSFFSKDYK---LRDRLGTAYYIAPEVLK-KKYNEKCDVWSCGVIMYIL  240 (504)
T ss_dssp             TTEECSCCSGGGEEESSTTCCSSEEECCCTTCEECCTTSC---BCCCCSCTTTCCHHHHT-TCBCTHHHHHHHHHHHHHH
T ss_pred             CCeEeCCCcHHHEEEecCCCCccEEEEECCCCEEcCCCCc---cccccCCcCCCCHHHhc-cCCCchHHHHHHHHHHHHH
Confidence            9999999999999998776   699999999987654432   13346899999999987 5689999999999999999


Q ss_pred             HhcCcccccccccCCCcccchHHHHHHHhhhcccCCCCCCccccCCCchhHHHHHHHHHHHHHHhccCCCCCCCCCCC
Q 044022          164 LAGRIHIWDLLKDTHDHGCFFNEYLKNYLEDKRFTGIPAPIIVQDIPCIEKEQQLHASAQLTLECVNNSPEDRPTMVD  241 (241)
Q Consensus       164 ~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~cl~~~p~~Rpt~~e  241 (241)
                      ++|..||...         ...+......... ..  ..        .......+..+.+|+.+||+.||++|||++|
T Consensus       241 l~g~~pf~~~---------~~~~~~~~i~~~~-~~--~~--------~~~~~~~s~~~~~li~~~L~~dp~~R~t~~e  298 (504)
T 3q5i_A          241 LCGYPPFGGQ---------NDQDIIKKVEKGK-YY--FD--------FNDWKNISDEAKELIKLMLTYDYNKRCTAEE  298 (504)
T ss_dssp             HHSSCSSCCS---------SHHHHHHHHHHCC-CC--CC--------HHHHTTSCHHHHHHHHHHTCSSTTTSCCHHH
T ss_pred             HhCCCCCCCC---------CHHHHHHHHHcCC-CC--CC--------ccccCCCCHHHHHHHHHHcCCChhHCCCHHH
Confidence            9999999652         1122222222111 10  00        0000122367899999999999999999853


No 159
>3bhy_A Death-associated protein kinase 3; death associated kinase, DAPK3, ZIP kinase, ZIPK, DAP kinase like kinase, DLK, structural genomics consortium; HET: 7CP; 1.24A {Homo sapiens} PDB: 3bqr_A* 2j90_A* 1yrp_A* 2yak_A* 2y4p_A* 3f5u_A* 1jks_A 1jkk_A* 1ig1_A* 1jkl_A 1jkt_A 3eh9_A* 3eha_A* 3f5g_A* 1p4f_A* 1wvw_A 1wvx_A* 1wvy_A* 2w4j_A* 3dgk_A ...
Probab=100.00  E-value=7.7e-39  Score=255.63  Aligned_cols=204  Identities=19%  Similarity=0.271  Sum_probs=159.2

Q ss_pred             cHHHHHHHHHHHHhcCCCcccceeeeeeeCCcceEEEEecCCCCHHHhhcCCC----chHHHHHHHHHHHhchhhcCCCC
Q 044022           12 TYGSCINNITYAAQMSHNHILKRIGCCLQTPIPILVFQSVEYGTLRDCIFGAP----LPRLKIASDIVNSLAYLHFGFPR   87 (241)
Q Consensus        12 ~~~~~~~e~~~l~~l~h~~iv~~~~~~~~~~~~~lv~e~~~~~sL~~~l~~~~----~~~~~~~~~i~~~l~~lh~~~~~   87 (241)
                      ..+.+.+|+.++++++||||+++++++...+..++||||+++++|.+++....    .....++.+++.||.|||   +.
T Consensus        51 ~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~i~~~l~~lH---~~  127 (283)
T 3bhy_A           51 SREEIEREVNILREIRHPNIITLHDIFENKTDVVLILELVSGGELFDFLAEKESLTEDEATQFLKQILDGVHYLH---SK  127 (283)
T ss_dssp             CHHHHHHHHHHHHHCCCTTBCCEEEEEECSSEEEEEEECCCSCBHHHHHHHHSSCCHHHHHHHHHHHHHHHHHHH---HT
T ss_pred             HHHHHHHHHHHHHhCCCCCeeehhheecCCCeEEEEEeecCCCcHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHH---hC
Confidence            46789999999999999999999999999999999999999999999986432    257789999999999999   89


Q ss_pred             CceeccCCCCCeeecCCC----CeEEeeccCceecCCCCcceeecccccCCCccCcccccccCCCcchhhHHHHHHHHHH
Q 044022           88 PIVLRNFKTQNILFNEEN----VAKWFDFLLSISIPEGETHITTDRVIGTRGYSAPEYISICVLNEKSNVFSFGAFLFEL  163 (241)
Q Consensus        88 ~ivh~dl~~~nil~~~~~----~~~l~df~~~~~~~~~~~~~~~~~~~~~~~~~aPE~~~~~~~~~~~Di~s~G~~~~~~  163 (241)
                      +++|+||||+||+++.++    .++|+|||.+.........   ....+++.|+|||.+.+..++.++||||||+++|+|
T Consensus       128 ~i~H~dl~p~Nil~~~~~~~~~~~kl~dfg~~~~~~~~~~~---~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l  204 (283)
T 3bhy_A          128 RIAHFDLKPENIMLLDKNVPNPRIKLIDFGIAHKIEAGNEF---KNIFGTPEFVAPEIVNYEPLGLEADMWSIGVITYIL  204 (283)
T ss_dssp             TEECSCCSGGGEEESCSSSSSCCEEECCCTTCEECC-----------CCCGGGCCHHHHTTCCCCTHHHHHHHHHHHHHH
T ss_pred             CccCCCCChHHEEEecCCCCCCceEEEecccceeccCCCcc---cccCCCcCccCcceecCCCCCcchhhhhHHHHHHHH
Confidence            999999999999998877    8999999999876543221   234688999999999988899999999999999999


Q ss_pred             HhcCcccccccccCCCcccchHHHHHHHhhhcccCCCCCCccccCCCchhHHHHHHHHHHHHHHhccCCCCCCCCCCC
Q 044022          164 LAGRIHIWDLLKDTHDHGCFFNEYLKNYLEDKRFTGIPAPIIVQDIPCIEKEQQLHASAQLTLECVNNSPEDRPTMVD  241 (241)
Q Consensus       164 ~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~cl~~~p~~Rpt~~e  241 (241)
                      ++|..||....         ..+....... ...  ........        ..+..+.+++.+||+.||++|||++|
T Consensus       205 ~~g~~p~~~~~---------~~~~~~~~~~-~~~--~~~~~~~~--------~~~~~~~~li~~~l~~dp~~Rps~~~  262 (283)
T 3bhy_A          205 LSGASPFLGET---------KQETLTNISA-VNY--DFDEEYFS--------NTSELAKDFIRRLLVKDPKRRMTIAQ  262 (283)
T ss_dssp             HHSSCTTCCSS---------HHHHHHHHHT-TCC--CCCHHHHT--------TCCHHHHHHHHTTSCSSGGGSCCHHH
T ss_pred             HHCCCCCCCcc---------hHHHHHHhHh-ccc--CCcchhcc--------cCCHHHHHHHHHHccCCHhHCcCHHH
Confidence            99999995421         1111111111 100  00101111        22357889999999999999999753


No 160
>3lxl_A Tyrosine-protein kinase JAK3; TYK2, inflammation, cancer, PAN inhibitor, ATP-binding mutation, membrane, nucleotide-binding, phosphoprot SCID; HET: IZA; 1.74A {Homo sapiens} PDB: 3lxk_A* 4hvd_A* 4hvg_A* 4hvh_A* 4hvi_A* 3pjc_A* 1yvj_A*
Probab=100.00  E-value=1e-39  Score=266.15  Aligned_cols=215  Identities=23%  Similarity=0.256  Sum_probs=161.9

Q ss_pred             ccHHHHHHHHHHHHhcCCCcccceeeeee--eCCcceEEEEecCCCCHHHhhcCCC-----chHHHHHHHHHHHhchhhc
Q 044022           11 HTYGSCINNITYAAQMSHNHILKRIGCCL--QTPIPILVFQSVEYGTLRDCIFGAP-----LPRLKIASDIVNSLAYLHF   83 (241)
Q Consensus        11 ~~~~~~~~e~~~l~~l~h~~iv~~~~~~~--~~~~~~lv~e~~~~~sL~~~l~~~~-----~~~~~~~~~i~~~l~~lh~   83 (241)
                      ...+.+.+|++++++++||||+++++++.  ..+..++||||+++++|.+++....     ..+..++.+++.||.||| 
T Consensus        66 ~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~i~~qi~~al~~lH-  144 (327)
T 3lxl_A           66 DQQRDFQREIQILKALHSDFIVKYRGVSYGPGRQSLRLVMEYLPSGCLRDFLQRHRARLDASRLLLYSSQICKGMEYLG-  144 (327)
T ss_dssp             HHHHHHHHHHHHHHTCCCTTBCCEEEEEECSSSCEEEEEEECCTTCBHHHHHHHHGGGCCHHHHHHHHHHHHHHHHHHH-
T ss_pred             HHHHHHHHHHHHHHhcCCCceeEEEEEEecCCCceEEEEEeecCCCCHHHHHHhcccCCCHHHHHHHHHHHHHHHHHHH-
Confidence            34567899999999999999999999987  4456899999999999999986521     256789999999999999 


Q ss_pred             CCCCCceeccCCCCCeeecCCCCeEEeeccCceecCCCCcc-eeecccccCCCccCcccccccCCCcchhhHHHHHHHHH
Q 044022           84 GFPRPIVLRNFKTQNILFNEENVAKWFDFLLSISIPEGETH-ITTDRVIGTRGYSAPEYISICVLNEKSNVFSFGAFLFE  162 (241)
Q Consensus        84 ~~~~~ivh~dl~~~nil~~~~~~~~l~df~~~~~~~~~~~~-~~~~~~~~~~~~~aPE~~~~~~~~~~~Di~s~G~~~~~  162 (241)
                        +.+++|+||||+||+++.++.++|+|||.+......... .......++..|+|||.+.+..++.++||||||+++|+
T Consensus       145 --~~~ivH~Dikp~NIl~~~~~~~kl~Dfg~~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~  222 (327)
T 3lxl_A          145 --SRRCVHRDLAARNILVESEAHVKIADFGLAKLLPLDKDYYVVREPGQSPIFWYAPESLSDNIFSRQSDVWSFGVVLYE  222 (327)
T ss_dssp             --HTTEECSCCSGGGEEEEETTEEEECCGGGCEECCTTCSEEECSSCCCSCGGGSCHHHHHHCEEEHHHHHHHHHHHHHH
T ss_pred             --hCCccCCCCChhhEEECCCCCEEEcccccceecccCCccceeeccCCccccccCHHHhccCCCChHHhHHHHHHHHHH
Confidence              899999999999999999999999999999876544322 22233457788999999998889999999999999999


Q ss_pred             HHhcCcccccccccC-----CCcccchHHHHHHHhhhcccCCCCCCccccCCCchhHHHHHHHHHHHHHHhccCCCCCCC
Q 044022          163 LLAGRIHIWDLLKDT-----HDHGCFFNEYLKNYLEDKRFTGIPAPIIVQDIPCIEKEQQLHASAQLTLECVNNSPEDRP  237 (241)
Q Consensus       163 ~~~g~~p~~~~~~~~-----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~cl~~~p~~Rp  237 (241)
                      |++|..||.......     .................+.....     ..        ..++.+.+++.+||+.||++||
T Consensus       223 ll~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-----~~--------~~~~~l~~li~~~l~~dP~~Rp  289 (327)
T 3lxl_A          223 LFTYCDKSCSPSAEFLRMMGCERDVPALSRLLELLEEGQRLPA-----PP--------ACPAEVHELMKLCWAPSPQDRP  289 (327)
T ss_dssp             HHTTTCGGGSHHHHHHHHCC----CCHHHHHHHHHHTTCCCCC-----CT--------TCCHHHHHHHHHHTCSSGGGSC
T ss_pred             HHhCCCCCccccchhhhhcccccccccHHHHHHHhhcccCCCC-----CC--------cccHHHHHHHHHHcCCChhhCc
Confidence            999999986522110     00000000111111111111111     11        2236789999999999999999


Q ss_pred             CCCC
Q 044022          238 TMVD  241 (241)
Q Consensus       238 t~~e  241 (241)
                      |++|
T Consensus       290 s~~e  293 (327)
T 3lxl_A          290 SFSA  293 (327)
T ss_dssp             CHHH
T ss_pred             CHHH
Confidence            9853


No 161
>3rgf_A Cyclin-dependent kinase 8; protein kinase complex, transferase,transcription; HET: BAX; 2.20A {Homo sapiens}
Probab=100.00  E-value=7.9e-39  Score=268.15  Aligned_cols=157  Identities=20%  Similarity=0.196  Sum_probs=125.6

Q ss_pred             HHHHHHHHHHHHhcCCCcccceeeeeee--CCcceEEEEecCCCCHHHhhcCC-------------CchHHHHHHHHHHH
Q 044022           13 YGSCINNITYAAQMSHNHILKRIGCCLQ--TPIPILVFQSVEYGTLRDCIFGA-------------PLPRLKIASDIVNS   77 (241)
Q Consensus        13 ~~~~~~e~~~l~~l~h~~iv~~~~~~~~--~~~~~lv~e~~~~~sL~~~l~~~-------------~~~~~~~~~~i~~~   77 (241)
                      ...+.+|++++++++||||+++++++..  ....++||||+. ++|.+++...             ...+..++.||+.|
T Consensus        62 ~~~~~~E~~~l~~l~hpniv~~~~~~~~~~~~~~~lv~e~~~-~~l~~~~~~~~~~~~~~~~~~l~~~~~~~i~~qi~~a  140 (405)
T 3rgf_A           62 SMSACREIALLRELKHPNVISLQKVFLSHADRKVWLLFDYAE-HDLWHIIKFHRASKANKKPVQLPRGMVKSLLYQILDG  140 (405)
T ss_dssp             CHHHHHHHHHHHHCCCTTBCCCCEEEEETTTTEEEEEEECCS-EEHHHHHHHHHHHC-------CCHHHHHHHHHHHHHH
T ss_pred             CHHHHHHHHHHHhcCCCCeeeEeeEEecCCCCeEEEEEeCCC-CCHHHHHHHhccccccccccCCCHHHHHHHHHHHHHH
Confidence            4578899999999999999999999964  568899999996 6888877521             11467899999999


Q ss_pred             hchhhcCCCCCceeccCCCCCeee----cCCCCeEEeeccCceecCCCCc-ceeecccccCCCccCccccccc-CCCcch
Q 044022           78 LAYLHFGFPRPIVLRNFKTQNILF----NEENVAKWFDFLLSISIPEGET-HITTDRVIGTRGYSAPEYISIC-VLNEKS  151 (241)
Q Consensus        78 l~~lh~~~~~~ivh~dl~~~nil~----~~~~~~~l~df~~~~~~~~~~~-~~~~~~~~~~~~~~aPE~~~~~-~~~~~~  151 (241)
                      |.|||   +.+|+||||||+|||+    +.++.+||+|||++........ ........||+.|+|||++.+. .++.++
T Consensus       141 l~~LH---~~~ivH~Dlkp~NIll~~~~~~~~~~kl~Dfg~a~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~  217 (405)
T 3rgf_A          141 IHYLH---ANWVLHRDLKPANILVMGEGPERGRVKIADMGFARLFNSPLKPLADLDPVVVTFWYRAPELLLGARHYTKAI  217 (405)
T ss_dssp             HHHHH---HTTCCCCCCCGGGEEECCSSTTTTCEEECCTTCCC----------------CCCTTCCHHHHTTCCSCCHHH
T ss_pred             HHHHH---hCCEeCCCcCHHHeEEecCCCCCCcEEEEECCCceecCCCCcccccCCCceecCcccCchhhcCCCcccchh
Confidence            99999   8999999999999999    6778999999999976543211 1222345789999999999874 589999


Q ss_pred             hhHHHHHHHHHHHhcCcccccc
Q 044022          152 NVFSFGAFLFELLAGRIHIWDL  173 (241)
Q Consensus       152 Di~s~G~~~~~~~~g~~p~~~~  173 (241)
                      |||||||++|+|++|+.||...
T Consensus       218 DiwSlG~il~ell~g~~pf~~~  239 (405)
T 3rgf_A          218 DIWAIGCIFAELLTSEPIFHCR  239 (405)
T ss_dssp             HHHHHHHHHHHHHHSSCTTCCC
T ss_pred             hhHHHHHHHHHHHhCCCCCCCc
Confidence            9999999999999999999653


No 162
>2vd5_A DMPK protein; serine/threonine-protein kinase, kinase, transferase, ATP-BI nucleotide-binding, cardiac contractility, muscle different; HET: BI8; 2.80A {Homo sapiens}
Probab=100.00  E-value=4.9e-39  Score=269.29  Aligned_cols=202  Identities=16%  Similarity=0.182  Sum_probs=157.5

Q ss_pred             cHHHHHHHHHHHHhcCCCcccceeeeeeeCCcceEEEEecCCCCHHHhhcCC--Cc---hHHHHHHHHHHHhchhhcCCC
Q 044022           12 TYGSCINNITYAAQMSHNHILKRIGCCLQTPIPILVFQSVEYGTLRDCIFGA--PL---PRLKIASDIVNSLAYLHFGFP   86 (241)
Q Consensus        12 ~~~~~~~e~~~l~~l~h~~iv~~~~~~~~~~~~~lv~e~~~~~sL~~~l~~~--~~---~~~~~~~~i~~~l~~lh~~~~   86 (241)
                      ....+.+|..++.+++||||+++++++...+..|+||||+++|+|.+++...  ..   ....++.+|+.||.|||   +
T Consensus       104 ~~~~~~~E~~il~~~~hp~Iv~l~~~~~~~~~~~lVmE~~~gg~L~~~l~~~~~~l~~~~~~~~~~qi~~aL~~LH---~  180 (412)
T 2vd5_A          104 EVSCFREERDVLVNGDRRWITQLHFAFQDENYLYLVMEYYVGGDLLTLLSKFGERIPAEMARFYLAEIVMAIDSVH---R  180 (412)
T ss_dssp             GGCCHHHHHHHHHHSCTTTBCCEEEEEECSSEEEEEECCCCSCBHHHHHHHHSSCCCHHHHHHHHHHHHHHHHHHH---H
T ss_pred             HHHHHHHHHHHHHhcCCCCeeeEEEEEeeCCEEEEEEcCCCCCcHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHH---H
Confidence            4556889999999999999999999999999999999999999999998652  12   45678999999999999   8


Q ss_pred             CCceeccCCCCCeeecCCCCeEEeeccCceecCCCCcceeecccccCCCccCccccc-------ccCCCcchhhHHHHHH
Q 044022           87 RPIVLRNFKTQNILFNEENVAKWFDFLLSISIPEGETHITTDRVIGTRGYSAPEYIS-------ICVLNEKSNVFSFGAF  159 (241)
Q Consensus        87 ~~ivh~dl~~~nil~~~~~~~~l~df~~~~~~~~~~~~~~~~~~~~~~~~~aPE~~~-------~~~~~~~~Di~s~G~~  159 (241)
                      .+|+||||||+|||++.++.+||+|||++......... ......||+.|+|||++.       ...++.++|+||||++
T Consensus       181 ~giiHrDLKp~NILld~~g~vkL~DFGla~~~~~~~~~-~~~~~~Gt~~Y~APE~l~~~~~~~~~~~~~~~~DiwSlGvi  259 (412)
T 2vd5_A          181 LGYVHRDIKPDNILLDRCGHIRLADFGSCLKLRADGTV-RSLVAVGTPDYLSPEILQAVGGGPGTGSYGPECDWWALGVF  259 (412)
T ss_dssp             TTEECCCCSGGGEEECTTSCEEECCCTTCEECCTTSCE-ECSSCCSCGGGCCHHHHHHHHTCTTCSEECTHHHHHHHHHH
T ss_pred             CCeeecccCHHHeeecCCCCEEEeechhheeccCCCcc-ccceeccccCcCCHHHHhhcccCcCCCCCChHHhhhHHhHH
Confidence            99999999999999999999999999999876544322 223457999999999997       3568899999999999


Q ss_pred             HHHHHhcCcccccccccCCCcccchHHHHHHHhhhcccCCCCCCccccCCCchhHHHHHHHHHHHHHHhccCCCCCCC
Q 044022          160 LFELLAGRIHIWDLLKDTHDHGCFFNEYLKNYLEDKRFTGIPAPIIVQDIPCIEKEQQLHASAQLTLECVNNSPEDRP  237 (241)
Q Consensus       160 ~~~~~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~cl~~~p~~Rp  237 (241)
                      +|+|++|+.||....         ..+..............  +....        ..+..+.+|+.+||. +|.+|+
T Consensus       260 lyelltG~~Pf~~~~---------~~~~~~~i~~~~~~~~~--p~~~~--------~~s~~~~dli~~lL~-~p~~Rl  317 (412)
T 2vd5_A          260 AYEMFYGQTPFYADS---------TAETYGKIVHYKEHLSL--PLVDE--------GVPEEARDFIQRLLC-PPETRL  317 (412)
T ss_dssp             HHHHHHSSCTTCCSS---------HHHHHHHHHTHHHHCCC--C------------CCCHHHHHHHHTTSS-CGGGCT
T ss_pred             HHHHHhCCCCCCCCC---------HHHHHHHHHhcccCcCC--Ccccc--------CCCHHHHHHHHHHcC-ChhhcC
Confidence            999999999996521         11222222211110111  11111        122578999999999 999985


No 163
>3n9x_A Phosphotransferase; malaria kinase, structural genomics, structural genomics CON SGC; 2.05A {Plasmodium berghei} PDB: 3nie_A*
Probab=100.00  E-value=2.4e-38  Score=267.33  Aligned_cols=167  Identities=19%  Similarity=0.218  Sum_probs=133.1

Q ss_pred             Ccccccccc-cccHHHHHHHHHHHHhcCCCcccceeeeeeeC-----CcceEEEEecCCCCHHHhhcCCCc----hHHHH
Q 044022            1 MKFYGHEYH-RHTYGSCINNITYAAQMSHNHILKRIGCCLQT-----PIPILVFQSVEYGTLRDCIFGAPL----PRLKI   70 (241)
Q Consensus         1 iK~~~~~~~-~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~~~-----~~~~lv~e~~~~~sL~~~l~~~~~----~~~~~   70 (241)
                      ||.+..... ....+++.+|++++++++||||+++++++...     +..|+||||+. ++|.+++.....    ....+
T Consensus        56 iK~~~~~~~~~~~~~~~~~E~~~l~~l~h~nIv~l~~~~~~~~~~~~~~~~lv~e~~~-~~L~~~~~~~~~l~~~~~~~i  134 (432)
T 3n9x_A           56 IKKVNRMFEDLIDCKRILREITILNRLKSDYIIRLYDLIIPDDLLKFDELYIVLEIAD-SDLKKLFKTPIFLTEEHIKTI  134 (432)
T ss_dssp             EEEECSTTTSHHHHHHHHHHHHHHHHCCCTTBCCEEEECCCSCTTTCCCEEEEEECCS-EEHHHHHHSSCCCCHHHHHHH
T ss_pred             EEEeCchhcChHHHHHHHHHHHHHHHcCCCCcceEEEEEecCCCCcCCeEEEEEecCC-cCHHHHHhccCCCCHHHHHHH
Confidence            354443322 23467899999999999999999999999866     56899999996 699999876532    46789


Q ss_pred             HHHHHHHhchhhcCCCCCceeccCCCCCeeecCCCCeEEeeccCceecCCCCcc--------------------eeeccc
Q 044022           71 ASDIVNSLAYLHFGFPRPIVLRNFKTQNILFNEENVAKWFDFLLSISIPEGETH--------------------ITTDRV  130 (241)
Q Consensus        71 ~~~i~~~l~~lh~~~~~~ivh~dl~~~nil~~~~~~~~l~df~~~~~~~~~~~~--------------------~~~~~~  130 (241)
                      +.||+.||.|||   +.+++||||||+|||++.++.+||+|||+++........                    ......
T Consensus       135 ~~qil~aL~~LH---~~givHrDlkp~NILl~~~~~~kL~DFGla~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  211 (432)
T 3n9x_A          135 LYNLLLGENFIH---ESGIIHRDLKPANCLLNQDCSVKVCDFGLARTINSEKDTNIVNDLEENEEPGPHNKNLKKQLTSH  211 (432)
T ss_dssp             HHHHHHHHHHHH---HTTEECCCCCGGGEEECTTCCEEECCCTTCEEC-------------------------------C
T ss_pred             HHHHHHHHHHHH---HCCCCCCCCCHHHeEECCCCCEEEccCCCcccccccccccccccccccccccccccchhccccCC
Confidence            999999999999   899999999999999999999999999999876443211                    112456


Q ss_pred             ccCCCccCcccc-cccCCCcchhhHHHHHHHHHHHhcCcccc
Q 044022          131 IGTRGYSAPEYI-SICVLNEKSNVFSFGAFLFELLAGRIHIW  171 (241)
Q Consensus       131 ~~~~~~~aPE~~-~~~~~~~~~Di~s~G~~~~~~~~g~~p~~  171 (241)
                      +||+.|+|||++ ....++.++|||||||++|+|++|..||.
T Consensus       212 ~gt~~Y~APE~~~~~~~~~~~~DiwSlG~il~ell~g~~p~~  253 (432)
T 3n9x_A          212 VVTRWYRAPELILLQENYTKSIDIWSTGCIFAELLNMLQSHI  253 (432)
T ss_dssp             CCCCTTCCHHHHTTCSCCCTHHHHHHHHHHHHHHHTTCTTTC
T ss_pred             CCCccccCHHHHhcCCCCCcccccchHHHHHHHHHhcccccc
Confidence            789999999986 45568999999999999999998665553


No 164
>3lm5_A Serine/threonine-protein kinase 17B; STK17B, serine/threonine kinase 17B, DRAK2, DAP kinase relat apoptosis-inducing protein kinase 2; HET: QUE; 2.29A {Homo sapiens} PDB: 3lm0_A*
Probab=100.00  E-value=1.4e-38  Score=259.54  Aligned_cols=214  Identities=19%  Similarity=0.220  Sum_probs=162.2

Q ss_pred             ccccccc-ccccHHHHHHHHHHHHhc-CCCcccceeeeeeeCCcceEEEEecCCCCHHHhhcCCC------chHHHHHHH
Q 044022            2 KFYGHEY-HRHTYGSCINNITYAAQM-SHNHILKRIGCCLQTPIPILVFQSVEYGTLRDCIFGAP------LPRLKIASD   73 (241)
Q Consensus         2 K~~~~~~-~~~~~~~~~~e~~~l~~l-~h~~iv~~~~~~~~~~~~~lv~e~~~~~sL~~~l~~~~------~~~~~~~~~   73 (241)
                      |++.... .......+.+|+.+++++ .||||+++++++...+..++||||+++|+|.+++....      ..+..++.+
T Consensus        60 K~~~~~~~~~~~~~~~~~e~~~l~~l~~~~~iv~~~~~~~~~~~~~lv~e~~~~~~L~~~~~~~~~~~~~~~~~~~i~~q  139 (327)
T 3lm5_A           60 KFLKKRRRGQDCRAEILHEIAVLELAKSCPRVINLHEVYENTSEIILILEYAAGGEIFSLCLPELAEMVSENDVIRLIKQ  139 (327)
T ss_dssp             EEEESEETTEECHHHHHHHHHHHHHTTTCTTBCCEEEEEECSSEEEEEEECCTTEEGGGGGSSCC-CCCCHHHHHHHHHH
T ss_pred             EEEehhhcchHHHHHHHHHHHHHHhccCCCCEEEEEEEEEeCCeEEEEEEecCCCcHHHHHHHhcccCCCHHHHHHHHHH
Confidence            4444322 234567899999999999 56999999999999999999999999999999986531      146789999


Q ss_pred             HHHHhchhhcCCCCCceeccCCCCCeeecC---CCCeEEeeccCceecCCCCcceeecccccCCCccCcccccccCCCcc
Q 044022           74 IVNSLAYLHFGFPRPIVLRNFKTQNILFNE---ENVAKWFDFLLSISIPEGETHITTDRVIGTRGYSAPEYISICVLNEK  150 (241)
Q Consensus        74 i~~~l~~lh~~~~~~ivh~dl~~~nil~~~---~~~~~l~df~~~~~~~~~~~~~~~~~~~~~~~~~aPE~~~~~~~~~~  150 (241)
                      ++.||.|||   +.+++||||||+||+++.   ++.++|+|||.+........   .....|++.|+|||++.+..++.+
T Consensus       140 l~~~L~~LH---~~givH~Dikp~NIl~~~~~~~~~~kL~Dfg~a~~~~~~~~---~~~~~gt~~y~aPE~~~~~~~~~~  213 (327)
T 3lm5_A          140 ILEGVYYLH---QNNIVHLDLKPQNILLSSIYPLGDIKIVDFGMSRKIGHACE---LREIMGTPEYLAPEILNYDPITTA  213 (327)
T ss_dssp             HHHHHHHHH---HTTEECSCCCGGGEEESCBTTBCCEEECCGGGCEEC------------CCCGGGCCHHHHTTCCCCTH
T ss_pred             HHHHHHHHH---HCCeecCcCChHHEEEecCCCCCcEEEeeCccccccCCccc---cccccCCcCccCCeeecCCCCCch
Confidence            999999999   899999999999999988   78999999999987654322   123468999999999998899999


Q ss_pred             hhhHHHHHHHHHHHhcCcccccccccCCCcccchHHHHHHHhhhcccCCCCCCccccCCCchhHHHHHHHHHHHHHHhcc
Q 044022          151 SNVFSFGAFLFELLAGRIHIWDLLKDTHDHGCFFNEYLKNYLEDKRFTGIPAPIIVQDIPCIEKEQQLHASAQLTLECVN  230 (241)
Q Consensus       151 ~Di~s~G~~~~~~~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~cl~  230 (241)
                      +||||||+++|+|++|+.||....         ..+......... . .... ....        ..+..+.+++.+||+
T Consensus       214 ~DiwslG~il~~ll~g~~pf~~~~---------~~~~~~~i~~~~-~-~~~~-~~~~--------~~~~~~~~li~~~L~  273 (327)
T 3lm5_A          214 TDMWNIGIIAYMLLTHTSPFVGED---------NQETYLNISQVN-V-DYSE-ETFS--------SVSQLATDFIQSLLV  273 (327)
T ss_dssp             HHHHHHHHHHHHHHHSSCSSCCSS---------HHHHHHHHHHTC-C-CCCT-TTTT--------TSCHHHHHHHHHHSC
T ss_pred             hhHHHHHHHHHHHHhCCCCCCCCC---------chHHHHHHHhcc-c-ccCc-hhhc--------ccCHHHHHHHHHHcC
Confidence            999999999999999999995421         111111111111 0 0111 1111        123578899999999


Q ss_pred             CCCCCCCCCCC
Q 044022          231 NSPEDRPTMVD  241 (241)
Q Consensus       231 ~~p~~Rpt~~e  241 (241)
                      .||++|||++|
T Consensus       274 ~dP~~Rpt~~~  284 (327)
T 3lm5_A          274 KNPEKRPTAEI  284 (327)
T ss_dssp             SSGGGSCCHHH
T ss_pred             CChhhCcCHHH
Confidence            99999999853


No 165
>2h34_A Serine/threonine-protein kinase PKNE; apoenzyme, transferase; 2.80A {Mycobacterium tuberculosis}
Probab=100.00  E-value=1.3e-38  Score=257.77  Aligned_cols=204  Identities=16%  Similarity=0.152  Sum_probs=150.6

Q ss_pred             cHHHHHHHHHHHHhcCCCcccceeeeeeeCCcceEEEEecCCCCHHHhhcCCC----chHHHHHHHHHHHhchhhcCCCC
Q 044022           12 TYGSCINNITYAAQMSHNHILKRIGCCLQTPIPILVFQSVEYGTLRDCIFGAP----LPRLKIASDIVNSLAYLHFGFPR   87 (241)
Q Consensus        12 ~~~~~~~e~~~l~~l~h~~iv~~~~~~~~~~~~~lv~e~~~~~sL~~~l~~~~----~~~~~~~~~i~~~l~~lh~~~~~   87 (241)
                      ..+.+.+|+.++++++||||+++++++...+..++|+||+++++|.+++....    .....++.+++.||.|||   +.
T Consensus        77 ~~~~~~~e~~~l~~l~hp~iv~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~i~~qi~~~l~~lH---~~  153 (309)
T 2h34_A           77 FRTRMQREARTAGRLQEPHVVPIHDFGEIDGQLYVDMRLINGVDLAAMLRRQGPLAPPRAVAIVRQIGSALDAAH---AA  153 (309)
T ss_dssp             HHHHHHHHHHHHTTCCCTTBCCEEEEEEETTEEEEEEECCCCEEHHHHHHHHCSCCHHHHHHHHHHHHHHHHHHH---HT
T ss_pred             HHHHHHHHHHHHhhcCCCCeeEEEEEEeeCCeEEEEEEecCCCCHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHH---HC
Confidence            35778999999999999999999999999999999999999999999986532    256789999999999999   89


Q ss_pred             CceeccCCCCCeeecCCCCeEEeeccCceecCCCCcceeecccccCCCccCcccccccCCCcchhhHHHHHHHHHHHhcC
Q 044022           88 PIVLRNFKTQNILFNEENVAKWFDFLLSISIPEGETHITTDRVIGTRGYSAPEYISICVLNEKSNVFSFGAFLFELLAGR  167 (241)
Q Consensus        88 ~ivh~dl~~~nil~~~~~~~~l~df~~~~~~~~~~~~~~~~~~~~~~~~~aPE~~~~~~~~~~~Di~s~G~~~~~~~~g~  167 (241)
                      +++|+||||+||+++.++.++|+|||.+......... ......+++.|+|||.+.+..++.++||||||+++|+|++|+
T Consensus       154 ~i~H~dlkp~NIl~~~~~~~kl~Dfg~~~~~~~~~~~-~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~g~  232 (309)
T 2h34_A          154 GATHRDVKPENILVSADDFAYLVDFGIASATTDEKLT-QLGNTVGTLYYMAPERFSESHATYRADIYALTCVLYECLTGS  232 (309)
T ss_dssp             TCCCSCCCGGGEEECTTSCEEECSCCC-----------------CCGGGCCGGGTCC----CCCHHHHHHHHHHHHHHSS
T ss_pred             cCCcCCCChHHEEEcCCCCEEEecCccCccccccccc-cccccCCCcCccCHHHHcCCCCCchHhHHHHHHHHHHHHHCC
Confidence            9999999999999999999999999998765443211 123346889999999999888999999999999999999999


Q ss_pred             cccccccccCCCcccchHHHHHHHhhhcccCCCCCCccccCCCchhHHHHHHHHHHHHHHhccCCCCCCC-CCC
Q 044022          168 IHIWDLLKDTHDHGCFFNEYLKNYLEDKRFTGIPAPIIVQDIPCIEKEQQLHASAQLTLECVNNSPEDRP-TMV  240 (241)
Q Consensus       168 ~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~cl~~~p~~Rp-t~~  240 (241)
                      .||....         . ............   .........        +..+.+++.+||+.||++|| |++
T Consensus       233 ~pf~~~~---------~-~~~~~~~~~~~~---~~~~~~~~~--------~~~l~~li~~~l~~dP~~Rp~s~~  285 (309)
T 2h34_A          233 PPYQGDQ---------L-SVMGAHINQAIP---RPSTVRPGI--------PVAFDAVIARGMAKNPEDRYVTCG  285 (309)
T ss_dssp             CSSCSCH---------H-HHHHHHHHSCCC---CGGGTSTTC--------CTHHHHHHHHHTCSSGGGSCSSHH
T ss_pred             CCCCCch---------H-HHHHHHhccCCC---CccccCCCC--------CHHHHHHHHHhccCCHHHHHHhHH
Confidence            9995411         1 111111111100   011111222        24688999999999999999 553


No 166
>3g2f_A Bone morphogenetic protein receptor type-2; kinase, structural genomics, structural genomics consortium, ATP-binding, disease mutation; HET: ADP; 2.35A {Homo sapiens}
Probab=100.00  E-value=1.3e-38  Score=260.39  Aligned_cols=220  Identities=18%  Similarity=0.229  Sum_probs=154.3

Q ss_pred             HHHHHHHHHHH--HhcCCCcccceeeeeee-----CCcceEEEEecCCCCHHHhhcCCCc---hHHHHHHHHHHHhchhh
Q 044022           13 YGSCINNITYA--AQMSHNHILKRIGCCLQ-----TPIPILVFQSVEYGTLRDCIFGAPL---PRLKIASDIVNSLAYLH   82 (241)
Q Consensus        13 ~~~~~~e~~~l--~~l~h~~iv~~~~~~~~-----~~~~~lv~e~~~~~sL~~~l~~~~~---~~~~~~~~i~~~l~~lh   82 (241)
                      ...+..|.+++  ..++||||+++++.+..     ...+++||||+++|+|.+++.....   ....++.+++.||.|||
T Consensus        49 ~~~~~~e~~~~~~~~~~h~~i~~~~~~~~~~~~~~~~~~~lv~e~~~~g~L~~~l~~~~~~~~~~~~i~~qi~~~L~~LH  128 (336)
T 3g2f_A           49 RQNFINEKNIYRVPLMEHDNIARFIVGDERVTADGRMEYLLVMEYYPNGSLXKYLSLHTSDWVSSCRLAHSVTRGLAYLH  128 (336)
T ss_dssp             HHHHHHHHHHHTSTTCCCTTBCCEEEEEEEECTTSCEEEEEEECCCTTCBHHHHHHHCCBCHHHHHHHHHHHHHHHHHHH
T ss_pred             hhhHHHHHHHHHHHhccCcchhhheecccccccCCCceEEEEEecCCCCcHHHHHhhcccchhHHHHHHHHHHHHHHHHH
Confidence            44555555554  45899999999986543     2357899999999999999976543   46789999999999999


Q ss_pred             cCCCC---------CceeccCCCCCeeecCCCCeEEeeccCceecCCCCc------ceeecccccCCCccCcccccc---
Q 044022           83 FGFPR---------PIVLRNFKTQNILFNEENVAKWFDFLLSISIPEGET------HITTDRVIGTRGYSAPEYISI---  144 (241)
Q Consensus        83 ~~~~~---------~ivh~dl~~~nil~~~~~~~~l~df~~~~~~~~~~~------~~~~~~~~~~~~~~aPE~~~~---  144 (241)
                         +.         +++||||||+|||++.++.+||+|||++........      ........||+.|+|||++.+   
T Consensus       129 ---~~~~~~~~~~~~ivH~Dikp~Nill~~~~~~kL~DFG~a~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~  205 (336)
T 3g2f_A          129 ---TELPRGDHYKPAISHRDLNSRNVLVKNDGTCVISDFGLSMRLTGNRLVRPGEEDNAAISEVGTIRYMAPEVLEGAVN  205 (336)
T ss_dssp             ---CCBCCGGGCBCCEECSSCSGGGEEECTTSCEEECCCTTCEECSSSSCC---------CCTTSCGGGCCHHHHTTCCC
T ss_pred             ---hhhccccccccceeecccccceEEEcCCCcEEEeeccceeecccccccCccccccccccCCCccceeCchhhcCCcc
Confidence               77         999999999999999999999999999987653221      111224568999999999986   


Q ss_pred             ----cCCCcchhhHHHHHHHHHHHhcCcccccccccCCCcccc--------hHHHHHHHhhhcccCCCCCCccccCCCch
Q 044022          145 ----CVLNEKSNVFSFGAFLFELLAGRIHIWDLLKDTHDHGCF--------FNEYLKNYLEDKRFTGIPAPIIVQDIPCI  212 (241)
Q Consensus       145 ----~~~~~~~Di~s~G~~~~~~~~g~~p~~~~~~~~~~~~~~--------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  212 (241)
                          ..++.++||||||+++|+|++|..||.............        ..+............    +.+....+. 
T Consensus       206 ~~~~~~~~~~~DiwslG~il~ell~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~----~~~~~~~~~-  280 (336)
T 3g2f_A          206 LRDXESALKQVDMYALGLIYWEIFMRCTDLFPGESVPEYQMAFQTEVGNHPTFEDMQVLVSREKQR----PKFPEAWKE-  280 (336)
T ss_dssp             GGGHHHHHHHHHHHHHHHHHHHHHTTBGGGSTTSCCCCCCCTTHHHHCSSCCHHHHHHHHTTSCCC----CCCCTTCCC-
T ss_pred             cccccccccccchHHHHHHHHHHHhcCCcCCCccchhHHHHhhhcccCCCchHHHHHhhhcccccC----CCCCccccc-
Confidence                456678999999999999999988875532221111110        011111111111111    111111111 


Q ss_pred             hHHHHHHHHHHHHHHhccCCCCCCCCCCC
Q 044022          213 EKEQQLHASAQLTLECVNNSPEDRPTMVD  241 (241)
Q Consensus       213 ~~~~~~~~~~~l~~~cl~~~p~~Rpt~~e  241 (241)
                       ....+..+.+++.+||+.||++|||++|
T Consensus       281 -~~~~~~~l~~li~~cl~~dP~~Rps~~e  308 (336)
T 3g2f_A          281 -NSLAVRSLKETIEDCWDQDAEARLTAQX  308 (336)
T ss_dssp             -CSHHHHHHHHHHHHHSCSSGGGSCCHHH
T ss_pred             -ccchHHHHHHHHHHHhcCChhhCcchHH
Confidence             1245678999999999999999999853


No 167
>3mtl_A Cell division protein kinase 16; pctaire1, indirubin, structural genomics, structural consortium, SGC, transferase; HET: FEF; 2.40A {Homo sapiens}
Probab=100.00  E-value=1.5e-39  Score=264.84  Aligned_cols=165  Identities=19%  Similarity=0.243  Sum_probs=129.9

Q ss_pred             cccccccccccHHHHHHHHHHHHhcCCCcccceeeeeeeCCcceEEEEecCCCCHHHhhcCCC-----chHHHHHHHHHH
Q 044022            2 KFYGHEYHRHTYGSCINNITYAAQMSHNHILKRIGCCLQTPIPILVFQSVEYGTLRDCIFGAP-----LPRLKIASDIVN   76 (241)
Q Consensus         2 K~~~~~~~~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~~~~~~~lv~e~~~~~sL~~~l~~~~-----~~~~~~~~~i~~   76 (241)
                      |++...........+.+|++++++++||||+++++++...+..++||||+. ++|.+++....     .....++.+++.
T Consensus        33 K~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~lv~e~~~-~~l~~~~~~~~~~~~~~~~~~~~~qi~~  111 (324)
T 3mtl_A           33 KEIRLEHEEGAPCTAIREVSLLKDLKHANIVTLHDIIHTEKSLTLVFEYLD-KDLKQYLDDCGNIINMHNVKLFLFQLLR  111 (324)
T ss_dssp             EEECC------CCCCCCCHHHHSCCCCTTBCCEEEEEECSSCEEEEEECCS-EEHHHHHHHTTTCCCHHHHHHHHHHHHH
T ss_pred             EEEecccccccchhHHHHHHHHHhcCCCCCCeeeeEEeeCCEEEEEecccc-cCHHHHHHhcCCCCCHHHHHHHHHHHHH
Confidence            444433333333456689999999999999999999999999999999997 69988876532     146778999999


Q ss_pred             HhchhhcCCCCCceeccCCCCCeeecCCCCeEEeeccCceecCCCCcceeecccccCCCccCcccccc-cCCCcchhhHH
Q 044022           77 SLAYLHFGFPRPIVLRNFKTQNILFNEENVAKWFDFLLSISIPEGETHITTDRVIGTRGYSAPEYISI-CVLNEKSNVFS  155 (241)
Q Consensus        77 ~l~~lh~~~~~~ivh~dl~~~nil~~~~~~~~l~df~~~~~~~~~~~~~~~~~~~~~~~~~aPE~~~~-~~~~~~~Di~s  155 (241)
                      ||.|||   +.+++||||||+||+++.++.+||+|||.+.........  .....+|+.|+|||++.+ ..++.++||||
T Consensus       112 aL~~LH---~~~ivH~Dikp~NIl~~~~~~~kl~Dfg~a~~~~~~~~~--~~~~~~t~~y~aPE~~~~~~~~~~~~Diws  186 (324)
T 3mtl_A          112 GLAYCH---RQKVLHRDLKPQNLLINERGELKLADFGLARAKSIPTKT--YDNEVVTLWYRPPDILLGSTDYSTQIDMWG  186 (324)
T ss_dssp             HHHHHH---HTTEEESSCCGGGEEECTTCCEEECSSSEEECC--------------CGGGCCHHHHTTCCCCCTHHHHHH
T ss_pred             HHHHHH---HCCccCCCcCHHHEEECCCCCEEEccCcccccccCCccc--cccccCcccccChhhhcCCCCCCcHHHHHH
Confidence            999999   899999999999999999999999999998755433221  123467899999999876 56899999999


Q ss_pred             HHHHHHHHHhcCccccc
Q 044022          156 FGAFLFELLAGRIHIWD  172 (241)
Q Consensus       156 ~G~~~~~~~~g~~p~~~  172 (241)
                      ||+++|+|++|+.||..
T Consensus       187 lG~il~~l~~g~~pf~~  203 (324)
T 3mtl_A          187 VGCIFYEMATGRPLFPG  203 (324)
T ss_dssp             HHHHHHHHHHSSCSCCC
T ss_pred             HHHHHHHHHhCCCCCCC
Confidence            99999999999999965


No 168
>2v62_A Serine/threonine-protein kinase VRK2; transferase, ATP-binding, membrane, nucleotide-binding, TRAN; 1.7A {Homo sapiens}
Probab=100.00  E-value=8e-39  Score=262.77  Aligned_cols=212  Identities=18%  Similarity=0.203  Sum_probs=158.1

Q ss_pred             HHHHHHHHHHHHhcCCCcccceeeeeee----CCcceEEEEecCCCCHHHhhcCCC----chHHHHHHHHHHHhchhhcC
Q 044022           13 YGSCINNITYAAQMSHNHILKRIGCCLQ----TPIPILVFQSVEYGTLRDCIFGAP----LPRLKIASDIVNSLAYLHFG   84 (241)
Q Consensus        13 ~~~~~~e~~~l~~l~h~~iv~~~~~~~~----~~~~~lv~e~~~~~sL~~~l~~~~----~~~~~~~~~i~~~l~~lh~~   84 (241)
                      ...+.+|+..++.++||||+++++++..    ....++||||+ +++|.+++....    ..+..++.|++.||.|||  
T Consensus        92 ~~~~~~e~~~~~~l~h~ni~~~~~~~~~~~~~~~~~~lv~e~~-~~~L~~~l~~~~~~~~~~~~~i~~qi~~aL~~LH--  168 (345)
T 2v62_A           92 KKDCIKKWIERKQLDYLGIPLFYGSGLTEFKGRSYRFMVMERL-GIDLQKISGQNGTFKKSTVLQLGIRMLDVLEYIH--  168 (345)
T ss_dssp             CHHHHHHHHHHHTCSCCCCCCEEEEEEEESSSCEEEEEEEECE-EEEHHHHCBGGGBCCHHHHHHHHHHHHHHHHHHH--
T ss_pred             hhHHHHHHHhhccccccCcceeecccccccCCCcEEEEEEecc-CCCHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHH--
Confidence            3457788999999999999999999987    67899999999 899999987642    257889999999999999  


Q ss_pred             CCCCceeccCCCCCeeecCCC--CeEEeeccCceecCCCCcc-----eeecccccCCCccCcccccccCCCcchhhHHHH
Q 044022           85 FPRPIVLRNFKTQNILFNEEN--VAKWFDFLLSISIPEGETH-----ITTDRVIGTRGYSAPEYISICVLNEKSNVFSFG  157 (241)
Q Consensus        85 ~~~~ivh~dl~~~nil~~~~~--~~~l~df~~~~~~~~~~~~-----~~~~~~~~~~~~~aPE~~~~~~~~~~~Di~s~G  157 (241)
                       +.+++||||||+|||++.++  .+||+|||++.........     .......|+..|+|||++.+..++.++||||||
T Consensus       169 -~~~ivH~Dlkp~NIll~~~~~~~~kL~Dfg~a~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Di~slG  247 (345)
T 2v62_A          169 -ENEYVHGDIKAANLLLGYKNPDQVYLADYGLSYRYCPNGNHKQYQENPRKGHNGTIEFTSLDAHKGVALSRRSDVEILG  247 (345)
T ss_dssp             -HTTEECSCCSGGGEEEESSSTTSEEECCCTTCEESSGGGCCCCCCCCGGGCSCSCTTTCCHHHHHTCCCCHHHHHHHHH
T ss_pred             -hCCeeCCCcCHHHEEEccCCCCcEEEEeCCCceecccccccccchhccccccCCCccccCHHHhcCCCCCchhhHHHHH
Confidence             89999999999999999887  9999999999765432111     111345689999999999988899999999999


Q ss_pred             HHHHHHHhcCcccccccccCCCcccchHHHHHHHhhhcccCCCCCCccccCCCchhHHHHHHHHHHHHHHhccCCCCCCC
Q 044022          158 AFLFELLAGRIHIWDLLKDTHDHGCFFNEYLKNYLEDKRFTGIPAPIIVQDIPCIEKEQQLHASAQLTLECVNNSPEDRP  237 (241)
Q Consensus       158 ~~~~~~~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~cl~~~p~~Rp  237 (241)
                      +++|+|++|+.||.......    ...........     ...+. .+....+   ....+..+.+++.+||+.||++||
T Consensus       248 ~il~ell~g~~pf~~~~~~~----~~~~~~~~~~~-----~~~~~-~~~~~~~---~~~~~~~l~~li~~~l~~dp~~Rp  314 (345)
T 2v62_A          248 YCMLRWLCGKLPWEQNLKDP----VAVQTAKTNLL-----DELPQ-SVLKWAP---SGSSCCEIAQFLVCAHSLAYDEKP  314 (345)
T ss_dssp             HHHHHHHHSSCTTGGGTTCH----HHHHHHHHHHH-----HTTTH-HHHHHSC---TTSCCHHHHHHHHHHHTCCTTCCC
T ss_pred             HHHHHHHhCCCCcccccccc----HHHHHHHHhhc-----ccccH-HHHhhcc---ccccHHHHHHHHHHHhhcCcccCC
Confidence            99999999999995421110    00000001100     00000 0000000   001225789999999999999999


Q ss_pred             CCCC
Q 044022          238 TMVD  241 (241)
Q Consensus       238 t~~e  241 (241)
                      |++|
T Consensus       315 s~~~  318 (345)
T 2v62_A          315 NYQA  318 (345)
T ss_dssp             CHHH
T ss_pred             CHHH
Confidence            9753


No 169
>2clq_A Mitogen-activated protein kinase kinase kinase 5; transferase, metal-binding, apoptosis; HET: STU; 2.3A {Homo sapiens}
Probab=100.00  E-value=1.3e-38  Score=255.64  Aligned_cols=205  Identities=22%  Similarity=0.303  Sum_probs=157.0

Q ss_pred             ccHHHHHHHHHHHHhcCCCcccceeeeeeeCCcceEEEEecCCCCHHHhhcCCC-------chHHHHHHHHHHHhchhhc
Q 044022           11 HTYGSCINNITYAAQMSHNHILKRIGCCLQTPIPILVFQSVEYGTLRDCIFGAP-------LPRLKIASDIVNSLAYLHF   83 (241)
Q Consensus        11 ~~~~~~~~e~~~l~~l~h~~iv~~~~~~~~~~~~~lv~e~~~~~sL~~~l~~~~-------~~~~~~~~~i~~~l~~lh~   83 (241)
                      ...+.+.+|+.++++++||||+++++++...+..++||||+++++|.+++....       .....++.+++.||.||| 
T Consensus        61 ~~~~~~~~e~~~l~~l~h~~iv~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~qi~~~l~~lH-  139 (295)
T 2clq_A           61 RYSQPLHEEIALHKHLKHKNIVQYLGSFSENGFIKIFMEQVPGGSLSALLRSKWGPLKDNEQTIGFYTKQILEGLKYLH-  139 (295)
T ss_dssp             ---HHHHHHHHHHHTCCCTTBCCEEEEEEETTEEEEEEECCSEEEHHHHHHHTTCCCTTCHHHHHHHHHHHHHHHHHHH-
T ss_pred             HHHHHHHHHHHHHHhCCCCCEeeEeeEEEeCCcEEEEEEeCCCCCHHHHHHhhccCCCccHHHHHHHHHHHHHHHHHHH-
Confidence            456779999999999999999999999999999999999999999999986541       135668899999999999 


Q ss_pred             CCCCCceeccCCCCCeeecC-CCCeEEeeccCceecCCCCcceeecccccCCCccCcccccccC--CCcchhhHHHHHHH
Q 044022           84 GFPRPIVLRNFKTQNILFNE-ENVAKWFDFLLSISIPEGETHITTDRVIGTRGYSAPEYISICV--LNEKSNVFSFGAFL  160 (241)
Q Consensus        84 ~~~~~ivh~dl~~~nil~~~-~~~~~l~df~~~~~~~~~~~~~~~~~~~~~~~~~aPE~~~~~~--~~~~~Di~s~G~~~  160 (241)
                        +.+++|+||||+||+++. ++.++|+|||.+.........  .....+++.|+|||.+.+..  ++.++||||||+++
T Consensus       140 --~~~i~H~dl~p~Nil~~~~~~~~kl~Dfg~~~~~~~~~~~--~~~~~~~~~y~aPE~~~~~~~~~~~~~Di~slG~il  215 (295)
T 2clq_A          140 --DNQIVHRDIKGDNVLINTYSGVLKISDFGTSKRLAGINPC--TETFTGTLQYMAPEIIDKGPRGYGKAADIWSLGCTI  215 (295)
T ss_dssp             --HTTEECCCCSGGGEEEETTTCCEEECCTTTCEESCC-------CCCCCCGGGCCHHHHHHGGGGCSHHHHHHHHHHHH
T ss_pred             --hCCEEccCCChhhEEEECCCCCEEEeecccccccCCCCCc--ccccCCCccccChhhhcCCCCCCCcHHHHHHHHHHH
Confidence              899999999999999987 899999999999866543211  13346889999999997653  78999999999999


Q ss_pred             HHHHhcCcccccccccCCCcccchHHHHHHHhhhcccCCCCCCccccCCCchhHHHHHHHHHHHHHHhccCCCCCCCCCC
Q 044022          161 FELLAGRIHIWDLLKDTHDHGCFFNEYLKNYLEDKRFTGIPAPIIVQDIPCIEKEQQLHASAQLTLECVNNSPEDRPTMV  240 (241)
Q Consensus       161 ~~~~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~cl~~~p~~Rpt~~  240 (241)
                      |+|++|+.||......       ....... .....     .+.+...        .+..+.+++.+||+.||++|||++
T Consensus       216 ~~l~~g~~pf~~~~~~-------~~~~~~~-~~~~~-----~~~~~~~--------~~~~~~~li~~~l~~dp~~Rps~~  274 (295)
T 2clq_A          216 IEMATGKPPFYELGEP-------QAAMFKV-GMFKV-----HPEIPES--------MSAEAKAFILKCFEPDPDKRACAN  274 (295)
T ss_dssp             HHHHHTSCTTGGGSSH-------HHHHHHH-HHHCC-----CCCCCTT--------SCHHHHHHHHHTTCSSTTTSCCHH
T ss_pred             HHHHHCCCCccCCCch-------hHHHHhh-ccccc-----ccccccc--------CCHHHHHHHHHHccCChhhCCCHH
Confidence            9999999999652111       0111111 01111     1111111        225788999999999999999975


Q ss_pred             C
Q 044022          241 D  241 (241)
Q Consensus       241 e  241 (241)
                      |
T Consensus       275 ~  275 (295)
T 2clq_A          275 D  275 (295)
T ss_dssp             H
T ss_pred             H
Confidence            3


No 170
>3gbz_A Kinase, CMGC CDK; ssgcid, ATP-binding, nucleotide-binding, serine/threonine-protein kinase, transferase; 1.85A {Giardia lamblia} PDB: 3gc0_A*
Probab=100.00  E-value=3.4e-39  Score=263.32  Aligned_cols=166  Identities=20%  Similarity=0.227  Sum_probs=129.2

Q ss_pred             Ccccccccc-cccHHHHHHHHHHHHhcCCCcccceeeeeeeCCcceEEEEecCCCCHHHhhcCCCc----hHHHHHHHHH
Q 044022            1 MKFYGHEYH-RHTYGSCINNITYAAQMSHNHILKRIGCCLQTPIPILVFQSVEYGTLRDCIFGAPL----PRLKIASDIV   75 (241)
Q Consensus         1 iK~~~~~~~-~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~~~~~~~lv~e~~~~~sL~~~l~~~~~----~~~~~~~~i~   75 (241)
                      ||++..+.. ....+.+.+|++++++++||||+++++++...+..++||||++ ++|.+++.....    ....++.|++
T Consensus        64 iK~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~lv~e~~~-~~L~~~~~~~~~~~~~~~~~i~~ql~  142 (329)
T 3gbz_A           64 IKRIRLEHEEEGVPGTAIREVSLLKELQHRNIIELKSVIHHNHRLHLIFEYAE-NDLKKYMDKNPDVSMRVIKSFLYQLI  142 (329)
T ss_dssp             EEECCCCC--------CHHHHHHGGGCCCTTBCCEEEEEEETTEEEEEEECCS-EEHHHHHHHCTTCCHHHHHHHHHHHH
T ss_pred             EEEEcccccccccchhHHHHHHHHHHcCCCCcceEEEEEecCCEEEEEEecCC-CCHHHHHhhcCCCCHHHHHHHHHHHH
Confidence            355543332 2345678899999999999999999999999999999999997 699999876532    4678999999


Q ss_pred             HHhchhhcCCCCCceeccCCCCCeeec-----CCCCeEEeeccCceecCCCCcceeecccccCCCccCccccccc-CCCc
Q 044022           76 NSLAYLHFGFPRPIVLRNFKTQNILFN-----EENVAKWFDFLLSISIPEGETHITTDRVIGTRGYSAPEYISIC-VLNE  149 (241)
Q Consensus        76 ~~l~~lh~~~~~~ivh~dl~~~nil~~-----~~~~~~l~df~~~~~~~~~~~~~~~~~~~~~~~~~aPE~~~~~-~~~~  149 (241)
                      .||.|||   +.+++||||||+|||++     ..+.+||+|||.+.........  .....+|+.|+|||++.+. .++.
T Consensus       143 ~~l~~LH---~~~ivH~Dlkp~NIll~~~~~~~~~~~kl~Dfg~a~~~~~~~~~--~~~~~~t~~y~aPE~~~~~~~~~~  217 (329)
T 3gbz_A          143 NGVNFCH---SRRCLHRDLKPQNLLLSVSDASETPVLKIGDFGLARAFGIPIRQ--FTHEIITLWYRPPEILLGSRHYST  217 (329)
T ss_dssp             HHHHHHH---HTTCCCSCCCGGGEEEEC-----CCEEEECCTTHHHHHC-------------CCTTCCHHHHTTCCCCCT
T ss_pred             HHHHHHH---hCCEECCCCCHHHEEEecCCCCccceEEECcCCCccccCCcccc--cCCCcCCccccCHHHhcCCCCCCc
Confidence            9999999   89999999999999994     4556999999999765433221  1234679999999999875 4799


Q ss_pred             chhhHHHHHHHHHHHhcCccccc
Q 044022          150 KSNVFSFGAFLFELLAGRIHIWD  172 (241)
Q Consensus       150 ~~Di~s~G~~~~~~~~g~~p~~~  172 (241)
                      ++||||||+++|+|++|..||..
T Consensus       218 ~~DiwslG~il~ell~g~~pf~~  240 (329)
T 3gbz_A          218 SVDIWSIACIWAEMLMKTPLFPG  240 (329)
T ss_dssp             HHHHHHHHHHHHHHHHSSCSSCC
T ss_pred             HHHHHHHHHHHHHHHHCCCCcCC
Confidence            99999999999999999999954


No 171
>2h8h_A Proto-oncogene tyrosine-protein kinase SRC; SRC kinase, transferase; HET: PTR H8H; 2.20A {Homo sapiens} SCOP: b.34.2.1 d.93.1.1 d.144.1.7
Probab=100.00  E-value=2.5e-39  Score=279.87  Aligned_cols=201  Identities=23%  Similarity=0.304  Sum_probs=158.8

Q ss_pred             cHHHHHHHHHHHHhcCCCcccceeeeeeeCCcceEEEEecCCCCHHHhhcCC-----C-chHHHHHHHHHHHhchhhcCC
Q 044022           12 TYGSCINNITYAAQMSHNHILKRIGCCLQTPIPILVFQSVEYGTLRDCIFGA-----P-LPRLKIASDIVNSLAYLHFGF   85 (241)
Q Consensus        12 ~~~~~~~e~~~l~~l~h~~iv~~~~~~~~~~~~~lv~e~~~~~sL~~~l~~~-----~-~~~~~~~~~i~~~l~~lh~~~   85 (241)
                      ..+.|.+|+++|++++||||+++++++.. +..++||||+++|+|.+++...     . ...+.++.+|+.||.|||   
T Consensus       305 ~~~~~~~E~~~l~~l~hpniv~~~~~~~~-~~~~lv~e~~~~gsL~~~l~~~~~~~l~~~~~~~i~~qi~~~L~~LH---  380 (535)
T 2h8h_A          305 SPEAFLQEAQVMKKLRHEKLVQLYAVVSE-EPIYIVTEYMSKGSLLDFLKGETGKYLRLPQLVDMAAQIASGMAYVE---  380 (535)
T ss_dssp             CHHHHHHHHHHHHHCCCTTBCCEEEEECS-SSCEEEECCCTTEEHHHHHSHHHHTTCCHHHHHHHHHHHHHHHHHHH---
T ss_pred             CHHHHHHHHHHHHhCCCCCEeeEEEEEee-ccceEeeehhcCCcHHHHHhhcCCCCCCHHHHHHHHHHHHHHHHHHH---
Confidence            45789999999999999999999999876 6789999999999999999742     1 256789999999999999   


Q ss_pred             CCCceeccCCCCCeeecCCCCeEEeeccCceecCCCCcceeecccccCCCccCcccccccCCCcchhhHHHHHHHHHHHh
Q 044022           86 PRPIVLRNFKTQNILFNEENVAKWFDFLLSISIPEGETHITTDRVIGTRGYSAPEYISICVLNEKSNVFSFGAFLFELLA  165 (241)
Q Consensus        86 ~~~ivh~dl~~~nil~~~~~~~~l~df~~~~~~~~~~~~~~~~~~~~~~~~~aPE~~~~~~~~~~~Di~s~G~~~~~~~~  165 (241)
                      +++++||||||+|||++.++.+||+|||++........ .......++..|+|||++....++.++||||||+++|+|++
T Consensus       381 ~~~ivHrDlkp~NIll~~~~~~kl~DFG~a~~~~~~~~-~~~~~~~~~~~y~aPE~~~~~~~~~~sDvwSlGv~l~el~t  459 (535)
T 2h8h_A          381 RMNYVHRDLRAANILVGENLVCKVADFGLARLIEDNEY-TARQGAKFPIKWTAPEAALYGRFTIKSDVWSFGILLTELTT  459 (535)
T ss_dssp             HTTCCCSCCSGGGEEECGGGCEEECCTTSTTTCCCHHH-HTTCSTTSCGGGSCHHHHHHCCCCHHHHHHHHHHHHHHHTT
T ss_pred             hCCeeCCCCCHhhEEEcCCCcEEEcccccceecCCCce-ecccCCcCcccccCHHHhccCCCCchhhHHHHHHHHHHHHh
Confidence            89999999999999999999999999999976543211 11122346778999999998899999999999999999999


Q ss_pred             -cCcccccccccCCCcccchHHHHHHHhhhcccCCCCCCccccCCCchhHHHHHHHHHHHHHHhccCCCCCCCCCC
Q 044022          166 -GRIHIWDLLKDTHDHGCFFNEYLKNYLEDKRFTGIPAPIIVQDIPCIEKEQQLHASAQLTLECVNNSPEDRPTMV  240 (241)
Q Consensus       166 -g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~cl~~~p~~Rpt~~  240 (241)
                       |+.||....         ..+..... ..+.....     ..        .++..+.+||.+||+.||++|||++
T Consensus       460 ~g~~P~~~~~---------~~~~~~~i-~~~~~~~~-----~~--------~~~~~l~~li~~cl~~dP~~RPt~~  512 (535)
T 2h8h_A          460 KGRVPYPGMV---------NREVLDQV-ERGYRMPC-----PP--------ECPESLHDLMCQCWRKEPEERPTFE  512 (535)
T ss_dssp             TTCCSSTTCC---------HHHHHHHH-HTTCCCCC-----CT--------TCCHHHHHHHHHHTCSSGGGSCCHH
T ss_pred             CCCCCCCCCC---------HHHHHHHH-HcCCCCCC-----CC--------CCCHHHHHHHHHHcCCChhHCcCHH
Confidence             999995421         12222222 12211111     11        2235788999999999999999985


No 172
>2wqm_A Serine/threonine-protein kinase NEK7; ATP-binding, polymorphism, metal-binding, cell cycle kinase, mitosis, cytoplasm, magnesium, transferase; 2.10A {Homo sapiens} PDB: 2wqn_A*
Probab=100.00  E-value=1.4e-38  Score=257.50  Aligned_cols=206  Identities=23%  Similarity=0.332  Sum_probs=152.5

Q ss_pred             ccHHHHHHHHHHHHhcCCCcccceeeeeeeCCcceEEEEecCCCCHHHhhcC-----CC---chHHHHHHHHHHHhchhh
Q 044022           11 HTYGSCINNITYAAQMSHNHILKRIGCCLQTPIPILVFQSVEYGTLRDCIFG-----AP---LPRLKIASDIVNSLAYLH   82 (241)
Q Consensus        11 ~~~~~~~~e~~~l~~l~h~~iv~~~~~~~~~~~~~lv~e~~~~~sL~~~l~~-----~~---~~~~~~~~~i~~~l~~lh   82 (241)
                      ....++.+|+.++++++||||+++++++...+..++||||+++++|.+++..     ..   .....++.+++.||.|||
T Consensus        74 ~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~i~~qi~~~l~~LH  153 (310)
T 2wqm_A           74 KARADCIKEIDLLKQLNHPNVIKYYASFIEDNELNIVLELADAGDLSRMIKHFKKQKRLIPERTVWKYFVQLCSALEHMH  153 (310)
T ss_dssp             HHHHHHHHHHHHHHTCCCTTBCCEEEEEEETTEEEEEEECCCSCBHHHHHHHHHHTTCCCCHHHHHHHHHHHHHHHHHHH
T ss_pred             HHHHHHHHHHHHHHhCCCCCEeeEEEEEEcCCcEEEEEecCCCCCHHHHHHHhcccccCCCHHHHHHHHHHHHHHHHHHh
Confidence            4567789999999999999999999999999999999999999999998853     11   246789999999999999


Q ss_pred             cCCCCCceeccCCCCCeeecCCCCeEEeeccCceecCCCCcceeecccccCCCccCcccccccCCCcchhhHHHHHHHHH
Q 044022           83 FGFPRPIVLRNFKTQNILFNEENVAKWFDFLLSISIPEGETHITTDRVIGTRGYSAPEYISICVLNEKSNVFSFGAFLFE  162 (241)
Q Consensus        83 ~~~~~~ivh~dl~~~nil~~~~~~~~l~df~~~~~~~~~~~~~~~~~~~~~~~~~aPE~~~~~~~~~~~Di~s~G~~~~~  162 (241)
                         +.+++|+||||+||+++.++.++|+|||.+.........  .....+++.|+|||.+.+..++.++||||||+++|+
T Consensus       154 ---~~~i~H~dl~p~NIl~~~~~~~kl~Dfg~~~~~~~~~~~--~~~~~~~~~y~aPE~~~~~~~~~~~Dv~slG~il~~  228 (310)
T 2wqm_A          154 ---SRRVMHRDIKPANVFITATGVVKLGDLGLGRFFSSKTTA--AHSLVGTPYYMSPERIHENGYNFKSDIWSLGCLLYE  228 (310)
T ss_dssp             ---HTTCCCCCCCGGGEEECTTSCEEECCC--------------------CCSSCCHHHHTTCCCCHHHHHHHHHHHHHH
T ss_pred             ---hCCeeCCCCcHHHEEEcCCCCEEEEeccceeeecCCCcc--ccccCCCeeEeChHHhCCCCCCchhhHHHHHHHHHH
Confidence               899999999999999999999999999998765433211  123468899999999998899999999999999999


Q ss_pred             HHhcCcccccccccCCCcccchHHHHHHHhhhcccCCCCCCccccCCCchhHHHHHHHHHHHHHHhccCCCCCCCCCCC
Q 044022          163 LLAGRIHIWDLLKDTHDHGCFFNEYLKNYLEDKRFTGIPAPIIVQDIPCIEKEQQLHASAQLTLECVNNSPEDRPTMVD  241 (241)
Q Consensus       163 ~~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~cl~~~p~~Rpt~~e  241 (241)
                      |++|..||....       .......... .........    ..        ..+..+.+++.+||+.||++|||++|
T Consensus       229 l~~g~~p~~~~~-------~~~~~~~~~~-~~~~~~~~~----~~--------~~~~~l~~li~~~l~~dp~~Rps~~~  287 (310)
T 2wqm_A          229 MAALQSPFYGDK-------MNLYSLCKKI-EQCDYPPLP----SD--------HYSEELRQLVNMCINPDPEKRPDVTY  287 (310)
T ss_dssp             HHHSSCTTC----------CCHHHHHHHH-HTTCSCCCC----TT--------TSCHHHHHHHHHHTCSSGGGSCCHHH
T ss_pred             HHhCCCCCcccc-------hhHHHHHHHh-hcccCCCCc----cc--------ccCHHHHHHHHHHcCCChhhCCCHHH
Confidence            999999995421       1111111111 111111111    01        12257899999999999999999753


No 173
>1u46_A ACK-1, activated CDC42 kinase 1; tyrosine kinase, transferase; 2.00A {Homo sapiens} SCOP: d.144.1.7 PDB: 1u4d_A* 1u54_A* 3eqr_A* 3eqp_B*
Probab=100.00  E-value=5.8e-39  Score=257.25  Aligned_cols=205  Identities=20%  Similarity=0.342  Sum_probs=159.0

Q ss_pred             ccHHHHHHHHHHHHhcCCCcccceeeeeeeCCcceEEEEecCCCCHHHhhcCCC-----chHHHHHHHHHHHhchhhcCC
Q 044022           11 HTYGSCINNITYAAQMSHNHILKRIGCCLQTPIPILVFQSVEYGTLRDCIFGAP-----LPRLKIASDIVNSLAYLHFGF   85 (241)
Q Consensus        11 ~~~~~~~~e~~~l~~l~h~~iv~~~~~~~~~~~~~lv~e~~~~~sL~~~l~~~~-----~~~~~~~~~i~~~l~~lh~~~   85 (241)
                      ...+.+.+|++++++++||||+++++++.... .++|+||+++++|.+++....     .....++.+++.||.|||   
T Consensus        63 ~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~-~~~v~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~i~~~l~~lH---  138 (291)
T 1u46_A           63 EAMDDFIREVNAMHSLDHRNLIRLYGVVLTPP-MKMVTELAPLGSLLDRLRKHQGHFLLGTLSRYAVQVAEGMGYLE---  138 (291)
T ss_dssp             HHHHHHHHHHHHHHHCCCTTBCCEEEEECSSS-CEEEEECCTTCBHHHHHHHHGGGSCHHHHHHHHHHHHHHHHHHH---
T ss_pred             HHHHHHHHHHHHHHhCCCCCcccEEEEEccCC-ceeeEecccCCCHHHHHHhccCCcCHHHHHHHHHHHHHHHHHHH---
Confidence            45678999999999999999999999997665 889999999999999986531     246789999999999999   


Q ss_pred             CCCceeccCCCCCeeecCCCCeEEeeccCceecCCCCcc-eeecccccCCCccCcccccccCCCcchhhHHHHHHHHHHH
Q 044022           86 PRPIVLRNFKTQNILFNEENVAKWFDFLLSISIPEGETH-ITTDRVIGTRGYSAPEYISICVLNEKSNVFSFGAFLFELL  164 (241)
Q Consensus        86 ~~~ivh~dl~~~nil~~~~~~~~l~df~~~~~~~~~~~~-~~~~~~~~~~~~~aPE~~~~~~~~~~~Di~s~G~~~~~~~  164 (241)
                      +.+++|+||||+||+++.++.++|+|||.+......... .......++..|+|||.+.+..++.++||||||+++|+|+
T Consensus       139 ~~~i~H~dikp~Nili~~~~~~kl~Dfg~~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~  218 (291)
T 1u46_A          139 SKRFIHRDLAARNLLLATRDLVKIGDFGLMRALPQNDDHYVMQEHRKVPFAWCAPESLKTRTFSHASDTWMFGVTLWEMF  218 (291)
T ss_dssp             HTTEECSCCCGGGEEEEETTEEEECCCTTCEECCC-CCEEEC-----CCGGGCCHHHHHHCEEEHHHHHHHHHHHHHHHH
T ss_pred             hCCcccCCCchheEEEcCCCCEEEccccccccccccccchhhhccCCCCceeeCchhhcCCCCCchhhHHHHHHHHHHHH
Confidence            899999999999999999999999999999876544322 1222345677899999998888899999999999999999


Q ss_pred             h-cCcccccccccCCCcccchHHHHHHHhhhcccCCCCCCccccCCCchhHHHHHHHHHHHHHHhccCCCCCCCCCCC
Q 044022          165 A-GRIHIWDLLKDTHDHGCFFNEYLKNYLEDKRFTGIPAPIIVQDIPCIEKEQQLHASAQLTLECVNNSPEDRPTMVD  241 (241)
Q Consensus       165 ~-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~cl~~~p~~Rpt~~e  241 (241)
                      + |..||....         ..+.............     ...        ..+..+.+++.+||+.||++|||+.|
T Consensus       219 ~~g~~p~~~~~---------~~~~~~~~~~~~~~~~-----~~~--------~~~~~l~~li~~~l~~~p~~Rps~~~  274 (291)
T 1u46_A          219 TYGQEPWIGLN---------GSQILHKIDKEGERLP-----RPE--------DCPQDIYNVMVQCWAHKPEDRPTFVA  274 (291)
T ss_dssp             TTSCCTTTTCC---------HHHHHHHHHTSCCCCC-----CCT--------TCCHHHHHHHHHHTCSSGGGSCCHHH
T ss_pred             hCCCCCcccCC---------HHHHHHHHHccCCCCC-----CCc--------CcCHHHHHHHHHHccCCcccCcCHHH
Confidence            9 999995421         1222222222111111     111        12367899999999999999999753


No 174
>3qa8_A MGC80376 protein; kinase ubiquitin-like domain, phosphorylation, kinase domain ubiquitin-like domain, kinase, substrate binding; 3.60A {Xenopus laevis} PDB: 3qad_A* 3rzf_A*
Probab=100.00  E-value=4e-38  Score=275.07  Aligned_cols=235  Identities=20%  Similarity=0.212  Sum_probs=165.0

Q ss_pred             CcccccccccccHHHHHHHHHHHHhcCCCcccceeeeeee------CCcceEEEEecCCCCHHHhhcCCC-------chH
Q 044022            1 MKFYGHEYHRHTYGSCINNITYAAQMSHNHILKRIGCCLQ------TPIPILVFQSVEYGTLRDCIFGAP-------LPR   67 (241)
Q Consensus         1 iK~~~~~~~~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~~------~~~~~lv~e~~~~~sL~~~l~~~~-------~~~   67 (241)
                      ||++..+......+++.+|++++++++||||+++++++..      .+..++||||+++|+|.+++....       ...
T Consensus        44 VKvi~~~~~~~~~~~~~~Ei~iL~~L~HpnIV~l~~v~~~~~~~~~~~~~~LVmEy~~ggsL~~~L~~~~~~~~lse~~i  123 (676)
T 3qa8_A           44 IKQCRQELSPKNRERWCLEIQIMKKLNHPNVVSAREVPDGLQKLAPNDLPLLAMEYCEGGDLRKYLNQFENCCGLKEGPI  123 (676)
T ss_dssp             ECCCCSCCCHHHHHHHHHHHHHHHHCCBTTBCCEEECCTTTCCCCTTSSCCCEEECCSSCBHHHHHHSSSCTTCCCSSHH
T ss_pred             EEEecccCCHHHHHHHHHHHHHHHhCCCCCCCceeeeecccccccCCCeEEEEEEeCCCCCHHHHHHhcccCCCCCHHHH
Confidence            4666555555567789999999999999999999998765      667899999999999999987632       257


Q ss_pred             HHHHHHHHHHhchhhcCCCCCceeccCCCCCeeecCCCC---eEEeeccCceecCCCCcceeecccccCCCccCcccccc
Q 044022           68 LKIASDIVNSLAYLHFGFPRPIVLRNFKTQNILFNEENV---AKWFDFLLSISIPEGETHITTDRVIGTRGYSAPEYISI  144 (241)
Q Consensus        68 ~~~~~~i~~~l~~lh~~~~~~ivh~dl~~~nil~~~~~~---~~l~df~~~~~~~~~~~~~~~~~~~~~~~~~aPE~~~~  144 (241)
                      ..++.+++.||.|||   +.+++||||||+||+++.++.   ++|+|||.+.........   ....|++.|+|||.+.+
T Consensus       124 ~~I~~QLl~aL~yLH---s~gIVHrDLKP~NILl~~~g~~~~vKL~DFG~a~~~~~~~~~---~~~~gt~~Y~APE~l~~  197 (676)
T 3qa8_A          124 RTLLSDISSALRYLH---ENRIIHRDLKPENIVLQPGPQRLIHKIIDLGYAKELDQGELC---TEFVGTLQYLAPELLEQ  197 (676)
T ss_dssp             HHHHHHHHHHHHHHH---HTTBCCCCCCSTTEEEECCSSSCEEEECSCCCCCBTTSCCCC---CCCCSCCTTCSSCSSCC
T ss_pred             HHHHHHHHHHHHHHH---HCCCccCCCCHHHeEeecCCCceeEEEccccccccccccccc---ccccCCcccCChHHhcc
Confidence            889999999999999   899999999999999997664   899999999876544322   33578999999999999


Q ss_pred             cCCCcchhhHHHHHHHHHHHhcCcccccccccCCCcccchHHHHHHHhhhcccCCCCCCccccCCCchhHHHHHHHHHHH
Q 044022          145 CVLNEKSNVFSFGAFLFELLAGRIHIWDLLKDTHDHGCFFNEYLKNYLEDKRFTGIPAPIIVQDIPCIEKEQQLHASAQL  224 (241)
Q Consensus       145 ~~~~~~~Di~s~G~~~~~~~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l  224 (241)
                      ..++.++||||||+++|++++|..||............................+...-......+.......+..+.++
T Consensus       198 ~~~s~ksDIwSLGviLyeLltG~~Pf~~~~~~~~~~~~i~~~~~~~~~~~~~l~g~~~~~~~lp~p~~l~~~ls~~L~dL  277 (676)
T 3qa8_A          198 KKYTVTVDYWSFGTLAFECITGFRPFLPNWQPVQWHGKVREKSNEHIVVYDDLTGAVKFSSVLPTPNHLSGILAGKLERW  277 (676)
T ss_dssp             SCCSTTHHHHHHHHHHHHHHSSCSSCCSSCHHHHSSTTCC------CCSCCCCSSSCCCCSSSCCSCCCCGGGHHHHHHH
T ss_pred             CCCCchhHHHHHHHHHHHHHHCCCCCCcccchhhhhhhhhcccchhhhhhhhhccccccccccCCchhhchhhhHHHHHH
Confidence            99999999999999999999999999542110000000000000000000000000000000000111112355789999


Q ss_pred             HHHhccCCCCCCCCCCC
Q 044022          225 TLECVNNSPEDRPTMVD  241 (241)
Q Consensus       225 ~~~cl~~~p~~Rpt~~e  241 (241)
                      +..||..||++|||++|
T Consensus       278 I~~mL~~DP~kRPTa~e  294 (676)
T 3qa8_A          278 LQCMLMWHQRQRGTDPQ  294 (676)
T ss_dssp             HHHHSCSSCC---CCTT
T ss_pred             HHHHccCCHhhCcCHHH
Confidence            99999999999999975


No 175
>1qpc_A LCK kinase; alpha beta fold, transferase; HET: PTR ANP; 1.60A {Homo sapiens} SCOP: d.144.1.7 PDB: 1qpe_A* 1qpj_A* 2pl0_A* 3kxz_A* 3ac1_A* 2zm4_A* 2zyb_A* 2zm1_A* 3ac2_A* 3ac3_A* 3ac4_A* 3ac5_A* 3ac8_A* 3acj_A* 3ack_A* 3ad4_A* 3ad5_A* 3ad6_A* 3kmm_A* 1qpd_A* ...
Probab=100.00  E-value=3.4e-38  Score=251.50  Aligned_cols=201  Identities=23%  Similarity=0.319  Sum_probs=159.0

Q ss_pred             cHHHHHHHHHHHHhcCCCcccceeeeeeeCCcceEEEEecCCCCHHHhhcCCC------chHHHHHHHHHHHhchhhcCC
Q 044022           12 TYGSCINNITYAAQMSHNHILKRIGCCLQTPIPILVFQSVEYGTLRDCIFGAP------LPRLKIASDIVNSLAYLHFGF   85 (241)
Q Consensus        12 ~~~~~~~e~~~l~~l~h~~iv~~~~~~~~~~~~~lv~e~~~~~sL~~~l~~~~------~~~~~~~~~i~~~l~~lh~~~   85 (241)
                      ..+.+.+|++++++++||||+++++++. .+..++||||+++++|.+++....      .....++.+++.||.|||   
T Consensus        51 ~~~~~~~E~~~l~~l~h~~i~~~~~~~~-~~~~~~v~e~~~~~~L~~~l~~~~~~~~~~~~~~~i~~qi~~~l~~lH---  126 (279)
T 1qpc_A           51 SPDAFLAEANLMKQLQHQRLVRLYAVVT-QEPIYIITEYMENGSLVDFLKTPSGIKLTINKLLDMAAQIAEGMAFIE---  126 (279)
T ss_dssp             CHHHHHHHHHHHHHCCCTTBCCEEEEEC-SSSCEEEEECCTTCBHHHHTTSHHHHTCCHHHHHHHHHHHHHHHHHHH---
T ss_pred             cHHHHHHHHHHHHhCCCcCcceEEEEEc-CCCcEEEEecCCCCCHHHHHhcCCCCCCCHHHHHHHHHHHHHHHHHHH---
Confidence            4678999999999999999999999986 456899999999999999997531      246789999999999999   


Q ss_pred             CCCceeccCCCCCeeecCCCCeEEeeccCceecCCCCcceeecccccCCCccCcccccccCCCcchhhHHHHHHHHHHHh
Q 044022           86 PRPIVLRNFKTQNILFNEENVAKWFDFLLSISIPEGETHITTDRVIGTRGYSAPEYISICVLNEKSNVFSFGAFLFELLA  165 (241)
Q Consensus        86 ~~~ivh~dl~~~nil~~~~~~~~l~df~~~~~~~~~~~~~~~~~~~~~~~~~aPE~~~~~~~~~~~Di~s~G~~~~~~~~  165 (241)
                      +.+++|+||||+||+++.++.++|+|||.+........ .......++..|+|||.+.+..++.++||||||+++|+|++
T Consensus       127 ~~~i~H~dikp~Nil~~~~~~~kl~Dfg~~~~~~~~~~-~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~el~~  205 (279)
T 1qpc_A          127 ERNYIHRDLRAANILVSDTLSCKIADFGLARLIEDNEY-TAREGAKFPIKWTAPEAINYGTFTIKSDVWSFGILLTEIVT  205 (279)
T ss_dssp             HTTEECSCCSGGGEEECTTSCEEECCCTTCEECSSSCE-ECCTTCCCCTTTSCHHHHHHCEECHHHHHHHHHHHHHHHHT
T ss_pred             HCCeeccCCCHhhEEEcCCCCEEECCCcccccccCccc-ccccCCCCccCccChhhhccCCCCchhhhHHHHHHHHHHHh
Confidence            89999999999999999999999999999987654322 11223346778999999988889999999999999999999


Q ss_pred             -cCcccccccccCCCcccchHHHHHHHhhhcccCCCCCCccccCCCchhHHHHHHHHHHHHHHhccCCCCCCCCCC
Q 044022          166 -GRIHIWDLLKDTHDHGCFFNEYLKNYLEDKRFTGIPAPIIVQDIPCIEKEQQLHASAQLTLECVNNSPEDRPTMV  240 (241)
Q Consensus       166 -g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~cl~~~p~~Rpt~~  240 (241)
                       |..||....         ..+....... +...     ....        ..+..+.+++.+||+.||++|||++
T Consensus       206 ~g~~p~~~~~---------~~~~~~~~~~-~~~~-----~~~~--------~~~~~l~~li~~~l~~~p~~Rps~~  258 (279)
T 1qpc_A          206 HGRIPYPGMT---------NPEVIQNLER-GYRM-----VRPD--------NCPEELYQLMRLCWKERPEDRPTFD  258 (279)
T ss_dssp             TTCCSSTTCC---------HHHHHHHHHT-TCCC-----CCCT--------TCCHHHHHHHHHHTCSSGGGSCCHH
T ss_pred             CCCCCCcccC---------HHHHHHHHhc-ccCC-----CCcc--------cccHHHHHHHHHHhccChhhCCCHH
Confidence             899985421         1122222211 1110     1111        1225789999999999999999975


No 176
>3com_A Serine/threonine-protein kinase 4; MST1, STE20-like kinase, PSI, structural genomics, protein structure initiative; HET: TPO; 2.20A {Homo sapiens}
Probab=100.00  E-value=2.8e-38  Score=256.08  Aligned_cols=204  Identities=23%  Similarity=0.271  Sum_probs=161.7

Q ss_pred             cHHHHHHHHHHHHhcCCCcccceeeeeeeCCcceEEEEecCCCCHHHhhcC--CCc---hHHHHHHHHHHHhchhhcCCC
Q 044022           12 TYGSCINNITYAAQMSHNHILKRIGCCLQTPIPILVFQSVEYGTLRDCIFG--APL---PRLKIASDIVNSLAYLHFGFP   86 (241)
Q Consensus        12 ~~~~~~~e~~~l~~l~h~~iv~~~~~~~~~~~~~lv~e~~~~~sL~~~l~~--~~~---~~~~~~~~i~~~l~~lh~~~~   86 (241)
                      ..+.+.+|+.++++++||||+++++++...+..++||||+++++|.+++..  ...   ....++.+++.||.|||   +
T Consensus        67 ~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~~~~~~L~~~~~~~~~~~~~~~~~~i~~~i~~~l~~lH---~  143 (314)
T 3com_A           67 DLQEIIKEISIMQQCDSPHVVKYYGSYFKNTDLWIVMEYCGAGSVSDIIRLRNKTLTEDEIATILQSTLKGLEYLH---F  143 (314)
T ss_dssp             CCHHHHHHHHHHHTCCCTTBCCEEEEEEETTEEEEEEECCTTEEHHHHHHHHTCCCCHHHHHHHHHHHHHHHHHHH---H
T ss_pred             HHHHHHHHHHHHHhCCCCCCccEEEEEEeCCEEEEEeecCCCCCHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHH---h
Confidence            457789999999999999999999999999999999999999999999852  222   46789999999999999   8


Q ss_pred             CCceeccCCCCCeeecCCCCeEEeeccCceecCCCCcceeecccccCCCccCcccccccCCCcchhhHHHHHHHHHHHhc
Q 044022           87 RPIVLRNFKTQNILFNEENVAKWFDFLLSISIPEGETHITTDRVIGTRGYSAPEYISICVLNEKSNVFSFGAFLFELLAG  166 (241)
Q Consensus        87 ~~ivh~dl~~~nil~~~~~~~~l~df~~~~~~~~~~~~~~~~~~~~~~~~~aPE~~~~~~~~~~~Di~s~G~~~~~~~~g  166 (241)
                      .+++|+||+|+||+++.++.++|+|||.+........  ......+++.|+|||.+.+..++.++||||||+++|+|++|
T Consensus       144 ~~i~H~dl~p~Nil~~~~~~~kl~dfg~~~~~~~~~~--~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~g  221 (314)
T 3com_A          144 MRKIHRDIKAGNILLNTEGHAKLADFGVAGQLTDTMA--KRNTVIGTPFWMAPEVIQEIGYNCVADIWSLGITAIEMAEG  221 (314)
T ss_dssp             TTEECCCCSGGGEEECTTCCEEECCCTTCEECBTTBS--CBCCCCSCGGGCCHHHHSSSCBCTTHHHHHHHHHHHHHHHS
T ss_pred             CCCcCCCcCHHHEEECCCCCEEEeecccchhhhhhcc--ccCccCCCCCccChhhcCCCCCCccccHHHHHHHHHHHHhC
Confidence            9999999999999999999999999999976544322  12334688999999999988899999999999999999999


Q ss_pred             CcccccccccCCCcccchHHHHHHHhhhcccCCCCCCccccCCCchhHHHHHHHHHHHHHHhccCCCCCCCCCCC
Q 044022          167 RIHIWDLLKDTHDHGCFFNEYLKNYLEDKRFTGIPAPIIVQDIPCIEKEQQLHASAQLTLECVNNSPEDRPTMVD  241 (241)
Q Consensus       167 ~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~cl~~~p~~Rpt~~e  241 (241)
                      ..||.....         ........ .........   ..        ..+..+.+++.+||+.||++|||++|
T Consensus       222 ~~p~~~~~~---------~~~~~~~~-~~~~~~~~~---~~--------~~~~~l~~li~~~l~~dp~~Rpt~~~  275 (314)
T 3com_A          222 KPPYADIHP---------MRAIFMIP-TNPPPTFRK---PE--------LWSDNFTDFVKQCLVKSPEQRATATQ  275 (314)
T ss_dssp             SCTTTTSCH---------HHHHHHHH-HSCCCCCSS---GG--------GSCHHHHHHHHHHTCSCTTTSCCHHH
T ss_pred             CCCCCCCCh---------HHHHHHHh-cCCCcccCC---cc--------cCCHHHHHHHHHHccCChhhCcCHHH
Confidence            999964211         11111111 111111110   11        12357889999999999999999753


No 177
>2h6d_A 5'-AMP-activated protein kinase catalytic subunit alpha-2; ATP-binding, cholesterol biosynthesis, fatty acid biosynthesis;kinase, lipid synthesis; 1.85A {Homo sapiens} PDB: 3aqv_A* 2yza_A*
Probab=100.00  E-value=1.8e-38  Score=252.56  Aligned_cols=201  Identities=25%  Similarity=0.337  Sum_probs=153.3

Q ss_pred             ccHHHHHHHHHHHHhcCCCcccceeeeeeeCCcceEEEEecCCCCHHHhhcCCC----chHHHHHHHHHHHhchhhcCCC
Q 044022           11 HTYGSCINNITYAAQMSHNHILKRIGCCLQTPIPILVFQSVEYGTLRDCIFGAP----LPRLKIASDIVNSLAYLHFGFP   86 (241)
Q Consensus        11 ~~~~~~~~e~~~l~~l~h~~iv~~~~~~~~~~~~~lv~e~~~~~sL~~~l~~~~----~~~~~~~~~i~~~l~~lh~~~~   86 (241)
                      ...+.+.+|++++++++||||+++++++...+..++||||+++++|.+++....    .....++.+++.||.|||   +
T Consensus        53 ~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~qi~~~l~~lH---~  129 (276)
T 2h6d_A           53 DVVGKIKREIQNLKLFRHPHIIKLYQVISTPTDFFMVMEYVSGGELFDYICKHGRVEEMEARRLFQQILSAVDYCH---R  129 (276)
T ss_dssp             TCHHHHHHHHHHHHTCCCTTBCCEEEEEECSSEEEEEEECCCSCBHHHHHHHHCSCCHHHHHHHHHHHHHHHHHHH---H
T ss_pred             hHHHHHHHHHHHHhcCCCCCEeEEEEEEecCCeEEEEEeccCCCcHHHHHhccCCCCHHHHHHHHHHHHHHHHHHH---H
Confidence            456788999999999999999999999999999999999999999999986432    256789999999999999   8


Q ss_pred             CCceeccCCCCCeeecCCCCeEEeeccCceecCCCCcceeecccccCCCccCcccccccCC-CcchhhHHHHHHHHHHHh
Q 044022           87 RPIVLRNFKTQNILFNEENVAKWFDFLLSISIPEGETHITTDRVIGTRGYSAPEYISICVL-NEKSNVFSFGAFLFELLA  165 (241)
Q Consensus        87 ~~ivh~dl~~~nil~~~~~~~~l~df~~~~~~~~~~~~~~~~~~~~~~~~~aPE~~~~~~~-~~~~Di~s~G~~~~~~~~  165 (241)
                      .+++|+||+|+||+++.++.++|+|||.+........   .....+++.|+|||.+.+..+ +.++||||||+++|+|++
T Consensus       130 ~~i~H~dl~p~Nil~~~~~~~~l~dfg~~~~~~~~~~---~~~~~~~~~y~aPE~~~~~~~~~~~~Di~slG~~l~~l~~  206 (276)
T 2h6d_A          130 HMVVHRDLKPENVLLDAHMNAKIADFGLSNMMSDGEF---LRTSCGSPNYAAPEVISGRLYAGPEVDIWSCGVILYALLC  206 (276)
T ss_dssp             HCSSCCCCCGGGEEECTTSCEEECCCCGGGCCCC----------------CCTGGGTTSCCCHHHHHHHHHHHHHHHHHH
T ss_pred             CCCccCCCChhhEEECCCCCEEEeecccccccCCCcc---eecccCCccccCHHHHcCCCCCCccchHHHHHHHHHHHHh
Confidence            9999999999999999999999999999876544322   123467899999999987765 589999999999999999


Q ss_pred             cCcccccccccCCCcccchHHHHHHHhhhcccCCCCCCccccCCCchhHHHHHHHHHHHHHHhccCCCCCCCCCCC
Q 044022          166 GRIHIWDLLKDTHDHGCFFNEYLKNYLEDKRFTGIPAPIIVQDIPCIEKEQQLHASAQLTLECVNNSPEDRPTMVD  241 (241)
Q Consensus       166 g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~cl~~~p~~Rpt~~e  241 (241)
                      |..||...         ...+...... .... ..     ..        ..+..+.+++.+||+.||++|||++|
T Consensus       207 g~~p~~~~---------~~~~~~~~~~-~~~~-~~-----~~--------~~~~~l~~li~~~l~~~p~~Rps~~~  258 (276)
T 2h6d_A          207 GTLPFDDE---------HVPTLFKKIR-GGVF-YI-----PE--------YLNRSVATLLMHMLQVDPLKRATIKD  258 (276)
T ss_dssp             SSCSSCCS---------SHHHHHHHHH-HCCC-CC-----CT--------TSCHHHHHHHHHHTCSSGGGSCCHHH
T ss_pred             CCCCCCCC---------cHHHHHHHhh-cCcc-cC-----ch--------hcCHHHHHHHHHHccCChhhCCCHHH
Confidence            99999541         1112222211 1111 01     11        11256889999999999999999853


No 178
>3llt_A Serine/threonine kinase-1, pflammer; lammer kinase, malaria, structural GE structural genomics consortium, SGC, transferase; HET: ANP; 2.50A {Plasmodium falciparum 3D7}
Probab=100.00  E-value=4.1e-38  Score=259.78  Aligned_cols=152  Identities=24%  Similarity=0.301  Sum_probs=134.5

Q ss_pred             cHHHHHHHHHHHHhcC-----CCcccceeeeeeeCCcceEEEEecCCCCHHHhhcCCC---c---hHHHHHHHHHHHhch
Q 044022           12 TYGSCINNITYAAQMS-----HNHILKRIGCCLQTPIPILVFQSVEYGTLRDCIFGAP---L---PRLKIASDIVNSLAY   80 (241)
Q Consensus        12 ~~~~~~~e~~~l~~l~-----h~~iv~~~~~~~~~~~~~lv~e~~~~~sL~~~l~~~~---~---~~~~~~~~i~~~l~~   80 (241)
                      ..+.+.+|+.+++.++     ||||+++++++...+..++||||+ +++|.+++....   .   ....++.||+.||.|
T Consensus        74 ~~~~~~~e~~~l~~l~~~~~~h~~iv~~~~~~~~~~~~~lv~e~~-~~~L~~~~~~~~~~~~~~~~~~~i~~qi~~aL~~  152 (360)
T 3llt_A           74 YTRSAKIEADILKKIQNDDINNNNIVKYHGKFMYYDHMCLIFEPL-GPSLYEIITRNNYNGFHIEDIKLYCIEILKALNY  152 (360)
T ss_dssp             HHHHHHHHHHHHHHTCCCSTTGGGBCCEEEEEEETTEEEEEECCC-CCBHHHHHHHTTTCCCCHHHHHHHHHHHHHHHHH
T ss_pred             hhhhhHHHHHHHHHhcccCCCCCCeecccceeeECCeeEEEEcCC-CCCHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHH
Confidence            4566788999999996     999999999999999999999999 899999986543   1   467889999999999


Q ss_pred             hhcCCCCCceeccCCCCCeeecC-------------------------CCCeEEeeccCceecCCCCcceeecccccCCC
Q 044022           81 LHFGFPRPIVLRNFKTQNILFNE-------------------------ENVAKWFDFLLSISIPEGETHITTDRVIGTRG  135 (241)
Q Consensus        81 lh~~~~~~ivh~dl~~~nil~~~-------------------------~~~~~l~df~~~~~~~~~~~~~~~~~~~~~~~  135 (241)
                      ||   +.+++||||||+|||++.                         ++.+||+|||++.......     ....||+.
T Consensus       153 LH---~~~ivHrDlkp~NIll~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~kl~DFG~a~~~~~~~-----~~~~gt~~  224 (360)
T 3llt_A          153 LR---KMSLTHTDLKPENILLDDPYFEKSLITVRRVTDGKKIQIYRTKSTGIKLIDFGCATFKSDYH-----GSIINTRQ  224 (360)
T ss_dssp             HH---HTTEECSCCSGGGEEESCTTCCEEEEEEECTTTCCEEEEEEESCCCEEECCCTTCEETTSCC-----CSCCSCGG
T ss_pred             HH---HCCeeeCCCCcccEEEccccccccccchhcccccccccccccCCCCEEEEeccCceecCCCC-----cCccCccc
Confidence            99   899999999999999975                         7899999999998654432     33568999


Q ss_pred             ccCcccccccCCCcchhhHHHHHHHHHHHhcCccccc
Q 044022          136 YSAPEYISICVLNEKSNVFSFGAFLFELLAGRIHIWD  172 (241)
Q Consensus       136 ~~aPE~~~~~~~~~~~Di~s~G~~~~~~~~g~~p~~~  172 (241)
                      |+|||++.+..++.++||||||+++|+|++|+.||..
T Consensus       225 y~aPE~~~~~~~~~~~DiwslG~il~ell~g~~pf~~  261 (360)
T 3llt_A          225 YRAPEVILNLGWDVSSDMWSFGCVLAELYTGSLLFRT  261 (360)
T ss_dssp             GCCHHHHTTCCCCTTHHHHHHHHHHHHHHHSSCSCCC
T ss_pred             ccCcHHHcCCCCCCccchHHHHHHHHHHHHCCCCCCC
Confidence            9999999999999999999999999999999999965


No 179
>2w5a_A Serine/threonine-protein kinase NEK2; Ser/Thr protein kinase, nucleus, meiosis, mitosis, cytoplasm, metal-binding, phosphoprotein; HET: ADP; 1.55A {Homo sapiens} PDB: 2wqo_A* 2xk3_A* 2xk4_A* 2xk6_A* 2xk7_A* 2xk8_A* 2xkc_A* 2xkd_A* 2xke_A* 2xkf_A* 2xnm_A* 2xnn_A* 2xno_A* 2xnp_A* 4afe_A* 2jav_A* 2w5b_A* 2w5h_A 4a4x_A*
Probab=100.00  E-value=2.8e-39  Score=257.72  Aligned_cols=203  Identities=19%  Similarity=0.285  Sum_probs=157.0

Q ss_pred             ccHHHHHHHHHHHHhcCCCcccceeeeeee--CCcceEEEEecCCCCHHHhhcCC--------CchHHHHHHHHHHHhch
Q 044022           11 HTYGSCINNITYAAQMSHNHILKRIGCCLQ--TPIPILVFQSVEYGTLRDCIFGA--------PLPRLKIASDIVNSLAY   80 (241)
Q Consensus        11 ~~~~~~~~e~~~l~~l~h~~iv~~~~~~~~--~~~~~lv~e~~~~~sL~~~l~~~--------~~~~~~~~~~i~~~l~~   80 (241)
                      ...+.+.+|++++++++||||+++++++..  .+..++||||+++++|.+++...        ......++.+++.||.|
T Consensus        47 ~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~i~~~i~~~l~~  126 (279)
T 2w5a_A           47 AEKQMLVSEVNLLRELKHPNIVRYYDRIIDRTNTTLYIVMEYCEGGDLASVITKGTKERQYLDEEFVLRVMTQLTLALKE  126 (279)
T ss_dssp             HHHHHHHHHHHHHHHCCCTTBCCEEEEEEEGGGTEEEEEEECCTTEEHHHHHHHHHHTTCCCCHHHHHHHHHHHHHHHHH
T ss_pred             HHHHHHHHHHHHHHhcCCCCCCeEEEEEecCCCceEEEEEeCCCCCCHHHHHHhhcccCCCCCHHHHHHHHHHHHHHHHH
Confidence            446678999999999999999999998854  56789999999999999998642        12467899999999999


Q ss_pred             hhcCCCCC-----ceeccCCCCCeeecCCCCeEEeeccCceecCCCCcceeecccccCCCccCcccccccCCCcchhhHH
Q 044022           81 LHFGFPRP-----IVLRNFKTQNILFNEENVAKWFDFLLSISIPEGETHITTDRVIGTRGYSAPEYISICVLNEKSNVFS  155 (241)
Q Consensus        81 lh~~~~~~-----ivh~dl~~~nil~~~~~~~~l~df~~~~~~~~~~~~~~~~~~~~~~~~~aPE~~~~~~~~~~~Di~s  155 (241)
                      ||   +.+     ++|+||||+||+++.++.++|+|||.+.........  .....+++.|+|||.+.+..++.++||||
T Consensus       127 lH---~~~~~~~~ivH~dl~p~NIl~~~~~~~kl~dfg~~~~~~~~~~~--~~~~~~~~~y~aPE~~~~~~~~~~~Di~s  201 (279)
T 2w5a_A          127 CH---RRSDGGHTVLHRDLKPANVFLDGKQNVKLGDFGLARILNHDTSF--AKTFVGTPYYMSPEQMNRMSYNEKSDIWS  201 (279)
T ss_dssp             HH---HHC------CCCCCSGGGEEECSSSCEEECCCCHHHHC---CHH--HHHHHSCCTTCCHHHHHCC-CCHHHHHHH
T ss_pred             Hh---cccCCCCeeEEeccchhhEEEcCCCCEEEecCchheeecccccc--ccccCCCccccChHHhccCCCCchhhHHH
Confidence            99   777     999999999999999999999999998765433211  12346889999999999888999999999


Q ss_pred             HHHHHHHHHhcCcccccccccCCCcccchHHHHHHHhhhcccCCCCCCccccCCCchhHHHHHHHHHHHHHHhccCCCCC
Q 044022          156 FGAFLFELLAGRIHIWDLLKDTHDHGCFFNEYLKNYLEDKRFTGIPAPIIVQDIPCIEKEQQLHASAQLTLECVNNSPED  235 (241)
Q Consensus       156 ~G~~~~~~~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~cl~~~p~~  235 (241)
                      ||+++|+|++|..||....         ..+.... ...+.....     ...        .+..+.+++.+||+.||++
T Consensus       202 lG~il~~l~~g~~p~~~~~---------~~~~~~~-i~~~~~~~~-----~~~--------~~~~l~~li~~~l~~~p~~  258 (279)
T 2w5a_A          202 LGCLLYELCALMPPFTAFS---------QKELAGK-IREGKFRRI-----PYR--------YSDELNEIITRMLNLKDYH  258 (279)
T ss_dssp             HHHHHHHHHHSSCSSCCSS---------HHHHHHH-HHHTCCCCC-----CTT--------SCHHHHHHHHHHTCSSGGG
T ss_pred             HHHHHHHHHHCCCCCcccC---------HHHHHHH-HhhcccccC-----Ccc--------cCHHHHHHHHHHcCCCccc
Confidence            9999999999999996521         1111111 122222111     111        2257899999999999999


Q ss_pred             CCCCCC
Q 044022          236 RPTMVD  241 (241)
Q Consensus       236 Rpt~~e  241 (241)
                      |||++|
T Consensus       259 Rps~~~  264 (279)
T 2w5a_A          259 RPSVEE  264 (279)
T ss_dssp             SCCHHH
T ss_pred             CCCHHH
Confidence            999853


No 180
>3i6u_A CDS1, serine/threonine-protein kinase CHK2; Ser/Thr protein kinase, FHA domain, ATP-binding, cell cycle, mutation, LI-fraumeni syndrome, magnesium; 3.00A {Homo sapiens} PDB: 3i6w_A
Probab=100.00  E-value=2e-38  Score=266.70  Aligned_cols=203  Identities=20%  Similarity=0.242  Sum_probs=148.9

Q ss_pred             HHHHHHHHHHHHhcCCCcccceeeeeeeCCcceEEEEecCCCCHHHhhcCCCc----hHHHHHHHHHHHhchhhcCCCCC
Q 044022           13 YGSCINNITYAAQMSHNHILKRIGCCLQTPIPILVFQSVEYGTLRDCIFGAPL----PRLKIASDIVNSLAYLHFGFPRP   88 (241)
Q Consensus        13 ~~~~~~e~~~l~~l~h~~iv~~~~~~~~~~~~~lv~e~~~~~sL~~~l~~~~~----~~~~~~~~i~~~l~~lh~~~~~~   88 (241)
                      ...+.+|++++++++||||+++++++. .+..++||||+++|+|.+++.....    ....++.|++.||.|||   +++
T Consensus       184 ~~~~~~E~~~l~~l~hpniv~l~~~~~-~~~~~lv~e~~~~g~L~~~l~~~~~~~~~~~~~i~~qi~~~l~~LH---~~~  259 (419)
T 3i6u_A          184 ALNVETEIEILKKLNHPCIIKIKNFFD-AEDYYIVLELMEGGELFDKVVGNKRLKEATCKLYFYQMLLAVQYLH---ENG  259 (419)
T ss_dssp             -CCHHHHHHHHHHCCCTTBCCCCEEEE-SSEEEEEEECCTTCBGGGGTSSSCCCCHHHHHHHHHHHHHHHHHHH---HTT
T ss_pred             HHHHHHHHHHHHhCCCCCEeeEEEEEe-cCceEEEEEcCCCCcHHHHHhccCCCCHHHHHHHHHHHHHHHHHHH---HCC
Confidence            346889999999999999999999985 4557999999999999998876532    46789999999999999   899


Q ss_pred             ceeccCCCCCeeecCCC---CeEEeeccCceecCCCCcceeecccccCCCccCcccccc---cCCCcchhhHHHHHHHHH
Q 044022           89 IVLRNFKTQNILFNEEN---VAKWFDFLLSISIPEGETHITTDRVIGTRGYSAPEYISI---CVLNEKSNVFSFGAFLFE  162 (241)
Q Consensus        89 ivh~dl~~~nil~~~~~---~~~l~df~~~~~~~~~~~~~~~~~~~~~~~~~aPE~~~~---~~~~~~~Di~s~G~~~~~  162 (241)
                      ++||||||+|||++..+   .+||+|||++........   .....||+.|+|||++.+   ..++.++||||||+++|+
T Consensus       260 ivHrDlkp~NIll~~~~~~~~~kl~DFG~a~~~~~~~~---~~~~~gt~~y~aPE~~~~~~~~~~~~~~DiwslG~il~~  336 (419)
T 3i6u_A          260 IIHRDLKPENVLLSSQEEDCLIKITDFGHSKILGETSL---MRTLCGTPTYLAPEVLVSVGTAGYNRAVDCWSLGVILFI  336 (419)
T ss_dssp             CCCSCCCGGGEEESSSSSSCCEEECCSSTTTSCC--------------CTTCCTTTTC----CTTHHHHHHHHHHHHHHH
T ss_pred             ccccCCChHhEEEecCCCcceEEEeecccceecCCCcc---ccccCCCCCccCceeeecCCCCCCCchhhhHhHHHHHHH
Confidence            99999999999997544   599999999976544321   133568999999999864   567889999999999999


Q ss_pred             HHhcCcccccccccCCCcccchHHHHHHHhhhcccCCCCCCccccCCCchhHHHHHHHHHHHHHHhccCCCCCCCCCCC
Q 044022          163 LLAGRIHIWDLLKDTHDHGCFFNEYLKNYLEDKRFTGIPAPIIVQDIPCIEKEQQLHASAQLTLECVNNSPEDRPTMVD  241 (241)
Q Consensus       163 ~~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~cl~~~p~~Rpt~~e  241 (241)
                      |++|..||......     ....+    ....+....  .+..        ....+..+.+++.+||+.||++|||++|
T Consensus       337 lltg~~pf~~~~~~-----~~~~~----~i~~~~~~~--~~~~--------~~~~~~~~~~li~~~L~~dP~~Rps~~e  396 (419)
T 3i6u_A          337 CLSGYPPFSEHRTQ-----VSLKD----QITSGKYNF--IPEV--------WAEVSEKALDLVKKLLVVDPKARFTTEE  396 (419)
T ss_dssp             HHHSSCSSCCCSSS-----CCHHH----HHHTTCCCC--CHHH--------HTTSCHHHHHHHHHHSCSSTTTSCCHHH
T ss_pred             HHHCCCCCCCCcch-----HHHHH----HHhcCCCCC--Cchh--------hcccCHHHHHHHHHHccCChhHCcCHHH
Confidence            99999999652111     11111    111111100  0000        0122367899999999999999999853


No 181
>1ua2_A CAK, cell division protein kinase 7; cell cycle, phosphorylation, protein-protein interaction, PR kinase, cell cycle, transferase; HET: TPO ATP; 3.02A {Homo sapiens} SCOP: d.144.1.7
Probab=100.00  E-value=4.6e-38  Score=258.33  Aligned_cols=214  Identities=21%  Similarity=0.193  Sum_probs=159.3

Q ss_pred             HHHHHHHHHHHHhcCCCcccceeeeeeeCCcceEEEEecCCCCHHHhhcCCC-----chHHHHHHHHHHHhchhhcCCCC
Q 044022           13 YGSCINNITYAAQMSHNHILKRIGCCLQTPIPILVFQSVEYGTLRDCIFGAP-----LPRLKIASDIVNSLAYLHFGFPR   87 (241)
Q Consensus        13 ~~~~~~e~~~l~~l~h~~iv~~~~~~~~~~~~~lv~e~~~~~sL~~~l~~~~-----~~~~~~~~~i~~~l~~lh~~~~~   87 (241)
                      .+.+.+|++++++++||||+++++++...+..++||||++ ++|.+++....     .....++.+++.||.|||   +.
T Consensus        56 ~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~lv~e~~~-~~l~~~~~~~~~~~~~~~~~~~~~qi~~~l~~lH---~~  131 (346)
T 1ua2_A           56 NRTALREIKLLQELSHPNIIGLLDAFGHKSNISLVFDFME-TDLEVIIKDNSLVLTPSHIKAYMLMTLQGLEYLH---QH  131 (346)
T ss_dssp             CTHHHHHHHHHHHCCCTTBCCEEEEECCTTCCEEEEECCS-EEHHHHHTTCCSSCCSSHHHHHHHHHHHHHHHHH---HT
T ss_pred             hHHHHHHHHHHhhCCCCCCCeEEEEEeeCCceEEEEEcCC-CCHHHHHHhcCcCCCHHHHHHHHHHHHHHHHHHH---HC
Confidence            4578899999999999999999999999999999999997 48988886542     257889999999999999   89


Q ss_pred             CceeccCCCCCeeecCCCCeEEeeccCceecCCCCcceeecccccCCCccCccccccc-CCCcchhhHHHHHHHHHHHhc
Q 044022           88 PIVLRNFKTQNILFNEENVAKWFDFLLSISIPEGETHITTDRVIGTRGYSAPEYISIC-VLNEKSNVFSFGAFLFELLAG  166 (241)
Q Consensus        88 ~ivh~dl~~~nil~~~~~~~~l~df~~~~~~~~~~~~~~~~~~~~~~~~~aPE~~~~~-~~~~~~Di~s~G~~~~~~~~g  166 (241)
                      +++||||||+||+++.++.+||+|||++.........  .....+|+.|+|||++.+. .++.++||||||+++|+|++|
T Consensus       132 ~ivH~Dlkp~Nil~~~~~~~kl~Dfg~a~~~~~~~~~--~~~~~~t~~y~aPE~~~~~~~~~~~~DiwslG~il~ell~g  209 (346)
T 1ua2_A          132 WILHRDLKPNNLLLDENGVLKLADFGLAKSFGSPNRA--YTHQVVTRWYRAPELLFGARMYGVGVDMWAVGCILAELLLR  209 (346)
T ss_dssp             TCCCCCCCGGGEEECTTCCEEECCCGGGSTTTSCCCC--CCCSCCCCTTCCHHHHTTCSCCCHHHHHHHHHHHHHHHHHS
T ss_pred             CEECCCCCHHHEEEcCCCCEEEEecccceeccCCccc--CCcccccccccCchHhhCCCCCCchhhhHhHHHHHHHHHHC
Confidence            9999999999999999999999999999765433221  2335689999999998754 578999999999999999999


Q ss_pred             CcccccccccCCCcccchHHHHHHHhhh-cc--cCCCC------CCccccCCCch----hHHHHHHHHHHHHHHhccCCC
Q 044022          167 RIHIWDLLKDTHDHGCFFNEYLKNYLED-KR--FTGIP------APIIVQDIPCI----EKEQQLHASAQLTLECVNNSP  233 (241)
Q Consensus       167 ~~p~~~~~~~~~~~~~~~~~~~~~~~~~-~~--~~~~~------~~~~~~~~~~~----~~~~~~~~~~~l~~~cl~~~p  233 (241)
                      .+||....         ..+........ +.  ....+      +.......+..    .....+..+.+|+.+||+.||
T Consensus       210 ~~~~~~~~---------~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP  280 (346)
T 1ua2_A          210 VPFLPGDS---------DLDQLTRIFETLGTPTEEQWPDMCSLPDYVTFKSFPGIPLHHIFSAAGDDLLDLIQGLFLFNP  280 (346)
T ss_dssp             SCSSCCSS---------HHHHHHHHHHHHCCCCTTTSSSTTSSTTCCCCCCCCCCCHHHHCTTCCHHHHHHHHHHHCSST
T ss_pred             CCCCCCCC---------HHHHHHHHHHHcCCCChhhhhhhccCcccccccccCCCChHHhhccCCHHHHHHHHHHhccCh
Confidence            99985421         11111111111 00  00000      00000000000    001233678999999999999


Q ss_pred             CCCCCCCC
Q 044022          234 EDRPTMVD  241 (241)
Q Consensus       234 ~~Rpt~~e  241 (241)
                      ++|||++|
T Consensus       281 ~~Rpt~~e  288 (346)
T 1ua2_A          281 CARITATQ  288 (346)
T ss_dssp             TTSCCHHH
T ss_pred             hhCCCHHH
Confidence            99999854


No 182
>3q60_A ROP5B; pseudokinase, transferase; HET: ATP; 1.72A {Toxoplasma gondii} PDB: 3q5z_A*
Probab=100.00  E-value=5.4e-39  Score=266.26  Aligned_cols=217  Identities=9%  Similarity=0.046  Sum_probs=144.9

Q ss_pred             Cccccccc--ccccHHHHHHHHHHHHhc--CCCccccee-------eeeeeC-----------------CcceEEEEecC
Q 044022            1 MKFYGHEY--HRHTYGSCINNITYAAQM--SHNHILKRI-------GCCLQT-----------------PIPILVFQSVE   52 (241)
Q Consensus         1 iK~~~~~~--~~~~~~~~~~e~~~l~~l--~h~~iv~~~-------~~~~~~-----------------~~~~lv~e~~~   52 (241)
                      ||++....  .....+.+.+|+++++.|  +||||++++       +++...                 ...++||||++
T Consensus        92 vK~~~~~~~~~~~~~~~~~~E~~~~~~l~~~hp~iv~~~~~~~~p~d~~~~~~~~~~~~~~~~~~~~~~~~~~lv~e~~~  171 (371)
T 3q60_A           92 LKVFTMGAENSRSELERLHEATFAAARLLGESPEEARDRRRLLLPSDAVAVQSQPPFAQLSPGQDDYAVANYLLLMPAAS  171 (371)
T ss_dssp             EEEEECCSTTHHHHHHHHHHHHHHHHHHHC----------CBCCCCEEEEETTSCSSSBCSCC---CCEEEEEEEECCCS
T ss_pred             EEEEEecccccccHHHHHHHHHHHHHHhcccChhhhhhceeEEeeehheecCCCCCeeeccCCcccceeeeEEEEecCCC
Confidence            35554433  223456677886555555  699988755       444332                 23799999998


Q ss_pred             CCCHHHhhcCC----Cc-hH------HHHHHHHHHHhchhhcCCCCCceeccCCCCCeeecCCCCeEEeeccCceecCCC
Q 044022           53 YGTLRDCIFGA----PL-PR------LKIASDIVNSLAYLHFGFPRPIVLRNFKTQNILFNEENVAKWFDFLLSISIPEG  121 (241)
Q Consensus        53 ~~sL~~~l~~~----~~-~~------~~~~~~i~~~l~~lh~~~~~~ivh~dl~~~nil~~~~~~~~l~df~~~~~~~~~  121 (241)
                       |+|.+++...    .. .+      +.++.|++.||+|||   +++|+||||||+|||++.++.+||+|||++......
T Consensus       172 -~~L~~~l~~~~~~~~~~~~~~~~vk~~i~~qi~~aL~~LH---~~~ivHrDikp~NIll~~~~~~kL~DFG~a~~~~~~  247 (371)
T 3q60_A          172 -VDLELLFSTLDFVYVFRGDEGILALHILTAQLIRLAANLQ---SKGLVHGHFTPDNLFIMPDGRLMLGDVSALWKVGTR  247 (371)
T ss_dssp             -EEHHHHHHHHHHSCCCCHHHHHHHHHHHHHHHHHHHHHHH---HTTEEETTCSGGGEEECTTSCEEECCGGGEEETTCE
T ss_pred             -CCHHHHHHHhccccchhhhhhhhhHHHHHHHHHHHHHHHH---HCCCccCcCCHHHEEECCCCCEEEEecceeeecCCC
Confidence             8999998753    22 34      567799999999999   899999999999999999999999999999865432


Q ss_pred             CcceeecccccCCCccCcccccc--cCCCcchhhHHHHHHHHHHHhcCcccccccccCCCcccchHHHHHHHhhhcccCC
Q 044022          122 ETHITTDRVIGTRGYSAPEYISI--CVLNEKSNVFSFGAFLFELLAGRIHIWDLLKDTHDHGCFFNEYLKNYLEDKRFTG  199 (241)
Q Consensus       122 ~~~~~~~~~~~~~~~~aPE~~~~--~~~~~~~Di~s~G~~~~~~~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  199 (241)
                      .     ....+++.|+|||++.+  ..++.++||||||+++|+|++|+.||..........           ........
T Consensus       248 ~-----~~~~~t~~y~aPE~~~~~~~~~~~~~DiwSlG~il~elltg~~Pf~~~~~~~~~~-----------~~~~~~~~  311 (371)
T 3q60_A          248 G-----PASSVPVTYAPREFLNASTATFTHALNAWQLGLSIYRVWCLFLPFGLVTPGIKGS-----------WKRPSLRV  311 (371)
T ss_dssp             E-----EGGGSCGGGCCHHHHTCSEEECCHHHHHHHHHHHHHHHHHSSCSTTBCCTTCTTC-----------CCBCCTTS
T ss_pred             c-----cCccCCcCCcChhhccCCCCCcCccccHHHHHHHHHHHHhCCCCCCCcCcccccc-----------hhhhhhhh
Confidence            1     13456799999999987  678999999999999999999999997632211000           00000000


Q ss_pred             CCCCccccCCCchhHHHHHHHHHHHHHHhccCCCCCCCCCCC
Q 044022          200 IPAPIIVQDIPCIEKEQQLHASAQLTLECVNNSPEDRPTMVD  241 (241)
Q Consensus       200 ~~~~~~~~~~~~~~~~~~~~~~~~l~~~cl~~~p~~Rpt~~e  241 (241)
                      .......  .+  .....++.+.+|+.+||+.||++|||++|
T Consensus       312 ~~~~~~~--~~--~~~~~~~~~~~li~~~L~~dP~~Rpt~~e  349 (371)
T 3q60_A          312 PGTDSLA--FG--SCTPLPDFVKTLIGRFLNFDRRRRLLPLE  349 (371)
T ss_dssp             CCCCSCC--CT--TSSCCCHHHHHHHHHHTCSSTTTCCCHHH
T ss_pred             ccccccc--hh--hccCCCHHHHHHHHHHcCCChhhCCCHHH
Confidence            0000000  00  00122367899999999999999999853


No 183
>3rp9_A Mitogen-activated protein kinase; structural genomics, structural genomics consortium, SGC, TR; 2.40A {Toxoplasma gondii}
Probab=100.00  E-value=2.8e-38  Score=268.75  Aligned_cols=152  Identities=21%  Similarity=0.289  Sum_probs=124.8

Q ss_pred             ccHHHHHHHHHHHHhcCCCcccceeeeeeeC-----CcceEEEEecCCCCHHHhhcCCCc----hHHHHHHHHHHHhchh
Q 044022           11 HTYGSCINNITYAAQMSHNHILKRIGCCLQT-----PIPILVFQSVEYGTLRDCIFGAPL----PRLKIASDIVNSLAYL   81 (241)
Q Consensus        11 ~~~~~~~~e~~~l~~l~h~~iv~~~~~~~~~-----~~~~lv~e~~~~~sL~~~l~~~~~----~~~~~~~~i~~~l~~l   81 (241)
                      ...+++.+|+++|++++||||+++++++...     ...|+||||+. ++|.+++.....    ....++.||+.||.||
T Consensus        94 ~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~~~~~~lv~e~~~-~~L~~~~~~~~~l~~~~~~~~~~qi~~aL~~L  172 (458)
T 3rp9_A           94 IDCKRILREIAILNRLNHDHVVKVLDIVIPKDVEKFDELYVVLEIAD-SDFKKLFRTPVYLTELHIKTLLYNLLVGVKYV  172 (458)
T ss_dssp             HHHHHHHHHHHHHHHCCCTTBCCEEEECCCSCTTTCCCEEEEECCCS-EEHHHHHHSSCCCCHHHHHHHHHHHHHHHHHH
T ss_pred             HHHHHHHHHHHHHHhCCCCCCCceEEEEecCCcccCceEEEEEeccc-cchhhhcccCCCCCHHHHHHHHHHHHHHHHHH
Confidence            3467799999999999999999999999543     46899999985 799998876532    4678999999999999


Q ss_pred             hcCCCCCceeccCCCCCeeecCCCCeEEeeccCceecCCCCcc-------------------------eeecccccCCCc
Q 044022           82 HFGFPRPIVLRNFKTQNILFNEENVAKWFDFLLSISIPEGETH-------------------------ITTDRVIGTRGY  136 (241)
Q Consensus        82 h~~~~~~ivh~dl~~~nil~~~~~~~~l~df~~~~~~~~~~~~-------------------------~~~~~~~~~~~~  136 (241)
                      |   +.+|+||||||+|||++.++.+||+|||+++........                         ......+||+.|
T Consensus       173 H---~~~iiHrDlKp~NILl~~~~~~kl~DFGla~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~Y  249 (458)
T 3rp9_A          173 H---SAGILHRDLKPANCLVNQDCSVKVCDFGLARTVDYPENGNSQLPISPREDDMNLVTFPHTKNLKRQLTGHVVTRWY  249 (458)
T ss_dssp             H---HTTCBCCCCCGGGEEECTTCCEEECCCTTCBCTTSCTTCCCCCC---------------------------CCCTT
T ss_pred             H---hCCcCCCCCChhhEEECCCCCEeecccccchhccCccccccccccCccccccccccccccccccccccCCcccccc
Confidence            9   899999999999999999999999999999865422110                         112345689999


Q ss_pred             cCcccc-cccCCCcchhhHHHHHHHHHHHhc
Q 044022          137 SAPEYI-SICVLNEKSNVFSFGAFLFELLAG  166 (241)
Q Consensus       137 ~aPE~~-~~~~~~~~~Di~s~G~~~~~~~~g  166 (241)
                      +|||++ ....++.++|||||||++|||++|
T Consensus       250 ~aPE~~~~~~~~~~~~DiwSlG~il~elltg  280 (458)
T 3rp9_A          250 RAPELILLQENYTEAIDVWSIGCIFAELLNM  280 (458)
T ss_dssp             CCHHHHTTCCCCCTHHHHHHHHHHHHHHHTT
T ss_pred             cChHHhhCCCCCCcHhHHHHHHHHHHHHHHh
Confidence            999986 456789999999999999999994


No 184
>2qr7_A Ribosomal protein S6 kinase alpha-3; kinase domain, RSK2, autoinhibitory, ATP-binding, nucleotide phosphorylation, serine/threonine-protein kinase; 2.00A {Mus musculus} PDB: 2qr8_A 4d9t_A* 4d9u_A* 3rny_A 2wnt_A
Probab=100.00  E-value=3.2e-38  Score=258.84  Aligned_cols=204  Identities=18%  Similarity=0.238  Sum_probs=157.0

Q ss_pred             HHHHHHHHHHhc-CCCcccceeeeeeeCCcceEEEEecCCCCHHHhhcCCCc----hHHHHHHHHHHHhchhhcCCCCCc
Q 044022           15 SCINNITYAAQM-SHNHILKRIGCCLQTPIPILVFQSVEYGTLRDCIFGAPL----PRLKIASDIVNSLAYLHFGFPRPI   89 (241)
Q Consensus        15 ~~~~e~~~l~~l-~h~~iv~~~~~~~~~~~~~lv~e~~~~~sL~~~l~~~~~----~~~~~~~~i~~~l~~lh~~~~~~i   89 (241)
                      .+.+|++++.++ +||||+++++++...+..++||||+++|+|.+++.....    ....++.+|+.||.|||   +.++
T Consensus        61 ~~~~E~~~l~~~~~hp~iv~~~~~~~~~~~~~lv~E~~~gg~L~~~i~~~~~~~~~~~~~~~~qi~~al~~lH---~~gi  137 (342)
T 2qr7_A           61 DPTEEIEILLRYGQHPNIITLKDVYDDGKYVYVVTELMKGGELLDKILRQKFFSEREASAVLFTITKTVEYLH---AQGV  137 (342)
T ss_dssp             CCHHHHHHHHHHTTSTTBCCEEEEEECSSEEEEEECCCCSCBHHHHHHTCTTCCHHHHHHHHHHHHHHHHHHH---HTTE
T ss_pred             ChHHHHHHHHHhcCCCCcCeEEEEEEcCCEEEEEEeCCCCCcHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHH---HCCc
Confidence            346789999888 799999999999999999999999999999999866532    46789999999999999   8999


Q ss_pred             eeccCCCCCeeecCC----CCeEEeeccCceecCCCCcceeecccccCCCccCcccccccCCCcchhhHHHHHHHHHHHh
Q 044022           90 VLRNFKTQNILFNEE----NVAKWFDFLLSISIPEGETHITTDRVIGTRGYSAPEYISICVLNEKSNVFSFGAFLFELLA  165 (241)
Q Consensus        90 vh~dl~~~nil~~~~----~~~~l~df~~~~~~~~~~~~~~~~~~~~~~~~~aPE~~~~~~~~~~~Di~s~G~~~~~~~~  165 (241)
                      +||||||+|||+...    +.+||+|||++.........  .....+|+.|+|||++.+..++.++||||||+++|+|++
T Consensus       138 vHrDlkp~NIl~~~~~~~~~~~kl~Dfg~a~~~~~~~~~--~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~ell~  215 (342)
T 2qr7_A          138 VHRDLKPSNILYVDESGNPESIRICDFGFAKQLRAENGL--LMTPCYTANFVAPEVLERQGYDAACDIWSLGVLLYTMLT  215 (342)
T ss_dssp             ECSCCCGGGEEESSSSCSGGGEEECCCTTCEECBCTTCC--BCCSSCCSSCCCHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred             EeccCCHHHEEEecCCCCcCeEEEEECCCcccCcCCCCc--eeccCCCccccCHHHhcCCCCCCccCeeeHhHHHHHHhc
Confidence            999999999998543    35999999999865443221  133568999999999988888999999999999999999


Q ss_pred             cCcccccccccCCCcccchHHHHHHHhhhcccCCCCCCccccCCCchhHHHHHHHHHHHHHHhccCCCCCCCCCC
Q 044022          166 GRIHIWDLLKDTHDHGCFFNEYLKNYLEDKRFTGIPAPIIVQDIPCIEKEQQLHASAQLTLECVNNSPEDRPTMV  240 (241)
Q Consensus       166 g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~cl~~~p~~Rpt~~  240 (241)
                      |..||.....      ....+..... ..+.+. ... ....        ..+..+.+|+.+||..||++|||++
T Consensus       216 g~~Pf~~~~~------~~~~~~~~~i-~~~~~~-~~~-~~~~--------~~s~~~~~li~~~L~~dP~~R~t~~  273 (342)
T 2qr7_A          216 GYTPFANGPD------DTPEEILARI-GSGKFS-LSG-GYWN--------SVSDTAKDLVSKMLHVDPHQRLTAA  273 (342)
T ss_dssp             SSCSSCSSTT------SCHHHHHHHH-HHCCCC-CCS-TTTT--------TSCHHHHHHHHHHTCSSTTTSCCHH
T ss_pred             CCCCCCCCCc------CCHHHHHHHH-ccCCcc-cCc-cccc--------cCCHHHHHHHHHHCCCChhHCcCHH
Confidence            9999964211      1122222222 222111 010 0001        1235788999999999999999975


No 185
>2xrw_A Mitogen-activated protein kinase 8; transcription, MAPK signaling pathways, linear binding motif; HET: ANP; 1.33A {Homo sapiens} PDB: 1ukh_A 1uki_A* 2xs0_A* 3elj_A* 2h96_A* 2gmx_A* 2g01_A* 2no3_A* 3o2m_A* 3o17_A* 3pze_A* 3g9l_X* 2p33_A* 3cgf_A* 3cgo_A* 3g90_X* 2ok1_A* 3g9n_A* 1pmn_A* 1pmq_A* ...
Probab=100.00  E-value=2.9e-38  Score=261.90  Aligned_cols=155  Identities=18%  Similarity=0.215  Sum_probs=125.8

Q ss_pred             ccHHHHHHHHHHHHhcCCCcccceeeeeeeCC------cceEEEEecCCCCHHHhhcCCCc--hHHHHHHHHHHHhchhh
Q 044022           11 HTYGSCINNITYAAQMSHNHILKRIGCCLQTP------IPILVFQSVEYGTLRDCIFGAPL--PRLKIASDIVNSLAYLH   82 (241)
Q Consensus        11 ~~~~~~~~e~~~l~~l~h~~iv~~~~~~~~~~------~~~lv~e~~~~~sL~~~l~~~~~--~~~~~~~~i~~~l~~lh   82 (241)
                      ...+.+.+|+.++++++||||+++++++...+      ..++||||+. ++|.+.+.....  ....++.|++.||.|||
T Consensus        66 ~~~~~~~~E~~~l~~l~hpniv~~~~~~~~~~~~~~~~~~~lv~e~~~-~~l~~~~~~~~~~~~~~~i~~qi~~al~~lH  144 (371)
T 2xrw_A           66 THAKRAYRELVLMKCVNHKNIIGLLNVFTPQKSLEEFQDVYIVMELMD-ANLCQVIQMELDHERMSYLLYQMLCGIKHLH  144 (371)
T ss_dssp             HHHHHHHHHHHHHHHCCCTTBCCEEEEECSCCSTTTCCEEEEEEECCS-EEHHHHHHSCCCHHHHHHHHHHHHHHHHHHH
T ss_pred             HHHHHHHHHHHHHHhcCCCCccceEEeeccccccccccceEEEEEcCC-CCHHHHHhhccCHHHHHHHHHHHHHHHHHHH
Confidence            44567889999999999999999999997654      6799999997 588888764422  46789999999999999


Q ss_pred             cCCCCCceeccCCCCCeeecCCCCeEEeeccCceecCCCCcceeecccccCCCccCcccccccCCCcchhhHHHHHHHHH
Q 044022           83 FGFPRPIVLRNFKTQNILFNEENVAKWFDFLLSISIPEGETHITTDRVIGTRGYSAPEYISICVLNEKSNVFSFGAFLFE  162 (241)
Q Consensus        83 ~~~~~~ivh~dl~~~nil~~~~~~~~l~df~~~~~~~~~~~~~~~~~~~~~~~~~aPE~~~~~~~~~~~Di~s~G~~~~~  162 (241)
                         +.+++||||||+|||++.++.+||+|||++........   .....||+.|+|||++.+..++.++||||||+++|+
T Consensus       145 ---~~~ivH~Dlkp~NIl~~~~~~~kl~Dfg~a~~~~~~~~---~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~e  218 (371)
T 2xrw_A          145 ---SAGIIHRDLKPSNIVVKSDCTLKILDFGLARTAGTSFM---MTPYVVTRYYRAPEVILGMGYKENVDIWSVGCIMGE  218 (371)
T ss_dssp             ---HTTCCCSCCCGGGEEECTTSCEEECCCCC-------------------CTTCCHHHHTTCCCCTTHHHHHHHHHHHH
T ss_pred             ---HCCeecccCCHHHEEEcCCCCEEEEEeecccccccccc---cCCceecCCccCHHHhcCCCCCchHhHHHHHHHHHH
Confidence               89999999999999999999999999999976543221   123468999999999999899999999999999999


Q ss_pred             HHhcCccccc
Q 044022          163 LLAGRIHIWD  172 (241)
Q Consensus       163 ~~~g~~p~~~  172 (241)
                      |++|+.||..
T Consensus       219 l~~g~~pf~~  228 (371)
T 2xrw_A          219 MIKGGVLFPG  228 (371)
T ss_dssp             HHHSSCSSCC
T ss_pred             HHhCCCCCCC
Confidence            9999999965


No 186
>3op5_A Serine/threonine-protein kinase VRK1; adenosine triphosphate, amino acid sequence, binding sites, domain, models, molecular; HET: REB; 2.40A {Homo sapiens} PDB: 2lav_A 2kty_A 2kul_A
Probab=100.00  E-value=8.1e-39  Score=264.54  Aligned_cols=208  Identities=14%  Similarity=0.144  Sum_probs=152.9

Q ss_pred             HHHHHHHHHhcCCCcccceeeeeeeC----CcceEEEEecCCCCHHHhhcCCC-----chHHHHHHHHHHHhchhhcCCC
Q 044022           16 CINNITYAAQMSHNHILKRIGCCLQT----PIPILVFQSVEYGTLRDCIFGAP-----LPRLKIASDIVNSLAYLHFGFP   86 (241)
Q Consensus        16 ~~~e~~~l~~l~h~~iv~~~~~~~~~----~~~~lv~e~~~~~sL~~~l~~~~-----~~~~~~~~~i~~~l~~lh~~~~   86 (241)
                      +.+|+..+..++||||+++++++...    ...++||||+ +++|.+++....     ..++.++.|++.||.|||   +
T Consensus        95 ~~~e~~~~~~l~h~~iv~~~~~~~~~~~~~~~~~lv~e~~-g~~L~~~~~~~~~~l~~~~~~~i~~qi~~~l~~lH---~  170 (364)
T 3op5_A           95 QIQKWIRTRKLKYLGVPKYWGSGLHDKNGKSYRFMIMDRF-GSDLQKIYEANAKRFSRKTVLQLSLRILDILEYIH---E  170 (364)
T ss_dssp             HHHHHHHHTTCSCCCSCCEEEEEEEEETTEEEEEEEEECE-EEEHHHHHHHTTSCCCHHHHHHHHHHHHHHHHHHH---H
T ss_pred             HHHHHHHHhhccCCCCCeEEeeeeeccCCcceEEEEEeCC-CCCHHHHHHhccCCCCHHHHHHHHHHHHHHHHHHH---H
Confidence            44566667777899999999999865    4589999999 899999986542     157889999999999999   8


Q ss_pred             CCceeccCCCCCeeec--CCCCeEEeeccCceecCCCCcce-----eecccccCCCccCcccccccCCCcchhhHHHHHH
Q 044022           87 RPIVLRNFKTQNILFN--EENVAKWFDFLLSISIPEGETHI-----TTDRVIGTRGYSAPEYISICVLNEKSNVFSFGAF  159 (241)
Q Consensus        87 ~~ivh~dl~~~nil~~--~~~~~~l~df~~~~~~~~~~~~~-----~~~~~~~~~~~~aPE~~~~~~~~~~~Di~s~G~~  159 (241)
                      .+++||||||+|||++  .++.+||+|||++..........     ......||+.|+|||++.+..++.++||||||++
T Consensus       171 ~~iiHrDlkp~Nill~~~~~~~~kl~DFG~a~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Di~slG~~  250 (364)
T 3op5_A          171 HEYVHGDIKASNLLLNYKNPDQVYLVDYGLAYRYCPEGVHKAYAADPKRCHDGTIEFTSIDAHNGVAPSRRGDLEILGYC  250 (364)
T ss_dssp             TTEECCCCCGGGEEEESSCTTCEEECCCTTCEESSGGGCCCCSSCCSSCCCCCCTTTCCHHHHTTCCCCHHHHHHHHHHH
T ss_pred             CCeEEecCCHHHEEEecCCCCeEEEEECCcceecccCCcccccccCcccccCCCCCccCHHHhCCCCCCchhhHHHHHHH
Confidence            9999999999999999  88999999999997654322111     1123458999999999999899999999999999


Q ss_pred             HHHHHhcCcccccccccCCCcccchHHHHHHHhhhcccCCCCCCccccCCCchhHHHHHHHHHHHHHHhccCCCCCCCCC
Q 044022          160 LFELLAGRIHIWDLLKDTHDHGCFFNEYLKNYLEDKRFTGIPAPIIVQDIPCIEKEQQLHASAQLTLECVNNSPEDRPTM  239 (241)
Q Consensus       160 ~~~~~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~cl~~~p~~Rpt~  239 (241)
                      +|+|++|+.||......     ............. ......++.+..       ...+..+.+++..||+.||++|||+
T Consensus       251 l~el~~g~~Pf~~~~~~-----~~~~~~~~~~~~~-~~~~~~~~~~~~-------~~~~~~~~~li~~cl~~~p~~RP~~  317 (364)
T 3op5_A          251 MIQWLTGHLPWEDNLKD-----PKYVRDSKIRYRE-NIASLMDKCFPA-------ANAPGEIAKYMETVKLLDYTEKPLY  317 (364)
T ss_dssp             HHHHHHSCCTTGGGTTC-----HHHHHHHHHHHHH-CHHHHHHHHSCT-------TCCCHHHHHHHHHHHTCCTTCCCCH
T ss_pred             HHHHHhCCCCccccccC-----HHHHHHHHHHhhh-hHHHHHHHhccc-------ccCHHHHHHHHHHHhcCCCCCCCCH
Confidence            99999999999652111     1111111111000 000000000000       0123678999999999999999997


Q ss_pred             C
Q 044022          240 V  240 (241)
Q Consensus       240 ~  240 (241)
                      +
T Consensus       318 ~  318 (364)
T 3op5_A          318 E  318 (364)
T ss_dssp             H
T ss_pred             H
Confidence            5


No 187
>3byv_A Rhoptry kinase; malaria, transferase, structural genomics, structural genomics consortium, SGC; 1.80A {Toxoplasma gondii} PDB: 2w1z_A
Probab=100.00  E-value=1.7e-39  Score=269.74  Aligned_cols=193  Identities=11%  Similarity=0.131  Sum_probs=147.5

Q ss_pred             ccHHHHHHHH---HHHHhcCCCccccee-------eeeeeCC-----------------cceEEEEecCCCCHHHhhcCC
Q 044022           11 HTYGSCINNI---TYAAQMSHNHILKRI-------GCCLQTP-----------------IPILVFQSVEYGTLRDCIFGA   63 (241)
Q Consensus        11 ~~~~~~~~e~---~~l~~l~h~~iv~~~-------~~~~~~~-----------------~~~lv~e~~~~~sL~~~l~~~   63 (241)
                      ...+.+.+|+   +++++++|||||+++       +++...+                 ..++||||+ +|+|.+++...
T Consensus       115 ~~~~~~~~E~~~l~~l~~l~hpniv~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~lv~E~~-~g~L~~~l~~~  193 (377)
T 3byv_A          115 NAIKQMKEEVLRLRLLRGIKNQKQAKVHLRFIFPFDLVKDPQKKKMIRVRLDERDMWVLSRFFLYPRM-QSNLQTFGEVL  193 (377)
T ss_dssp             THHHHHHHHHHGGGGSTTCCSHHHHHHHHCBCCCSEEEECTTSCSEEEC------CEEESEEEEEECC-SEEHHHHHHHH
T ss_pred             HHHHHHHHHHHHHHhccccCCHHHHHHHhhhhhhhhhhhccCCccccccccCCCceEEEEEEEEEecc-CCCHHHHHHhc
Confidence            4567899999   555556899999998       5554443                 378999999 58999998642


Q ss_pred             ----C-------chHHHHHHHHHHHhchhhcCCCCCceeccCCCCCeeecCCCCeEEeeccCceecCCCCcceeeccccc
Q 044022           64 ----P-------LPRLKIASDIVNSLAYLHFGFPRPIVLRNFKTQNILFNEENVAKWFDFLLSISIPEGETHITTDRVIG  132 (241)
Q Consensus        64 ----~-------~~~~~~~~~i~~~l~~lh~~~~~~ivh~dl~~~nil~~~~~~~~l~df~~~~~~~~~~~~~~~~~~~~  132 (241)
                          .       ..++.++.|++.||.|||   +.+|+||||||+|||++.++.+||+|||++.....     ......|
T Consensus       194 ~~~~~~~~~l~~~~~~~i~~qi~~aL~~LH---~~~ivHrDikp~NIll~~~~~~kL~DFG~a~~~~~-----~~~~~~g  265 (377)
T 3byv_A          194 LSHSSTHKSLVHHARLQLTLQVIRLLASLH---HYGLVHTYLRPVDIVLDQRGGVFLTGFEHLVRDGA-----RVVSSVS  265 (377)
T ss_dssp             HHTTTTTHHHHHHHHHHHHHHHHHHHHHHH---HTTEECSCCCGGGEEECTTCCEEECCGGGCEETTC-----EEECCCC
T ss_pred             cccccccccccHHHHHHHHHHHHHHHHHHH---hCCeecCCCCHHHEEEcCCCCEEEEechhheecCC-----cccCCCC
Confidence                1       235678999999999999   89999999999999999999999999999986433     1234467


Q ss_pred             CCCccCccccccc-----------CCCcchhhHHHHHHHHHHHhcCcccccccccCCCcccchHHHHHHHhhhcccCCCC
Q 044022          133 TRGYSAPEYISIC-----------VLNEKSNVFSFGAFLFELLAGRIHIWDLLKDTHDHGCFFNEYLKNYLEDKRFTGIP  201 (241)
Q Consensus       133 ~~~~~aPE~~~~~-----------~~~~~~Di~s~G~~~~~~~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  201 (241)
                       +.|+|||++.+.           .++.++||||||+++|+|++|+.||.........              ......  
T Consensus       266 -~~y~aPE~~~~~~~~~~~~~~~~~~~~~~DvwSlG~il~elltg~~Pf~~~~~~~~~--------------~~~~~~--  328 (377)
T 3byv_A          266 -RGFEPPELEARRATISYHRDRRTLMTFSFDAWALGLVIYWIWCADLPITKDAALGGS--------------EWIFRS--  328 (377)
T ss_dssp             -TTCCCHHHHHHHTSTHHHHCCEEECCHHHHHHHHHHHHHHHHHSSCCC------CCS--------------GGGGSS--
T ss_pred             -cCccChhhhcccccccccccccccCChhhhHHHHHHHHHHHHHCCCCCcccccccch--------------hhhhhh--
Confidence             899999999887           8999999999999999999999999652211100              000000  


Q ss_pred             CCccccCCCchhHHHHHHHHHHHHHHhccCCCCCCCCCCC
Q 044022          202 APIIVQDIPCIEKEQQLHASAQLTLECVNNSPEDRPTMVD  241 (241)
Q Consensus       202 ~~~~~~~~~~~~~~~~~~~~~~l~~~cl~~~p~~Rpt~~e  241 (241)
                          ...        .++.+.+++.+||+.||++|||+.|
T Consensus       329 ----~~~--------~~~~~~~li~~~L~~dp~~Rpt~~e  356 (377)
T 3byv_A          329 ----CKN--------IPQPVRALLEGFLRYPKEDRLLPLQ  356 (377)
T ss_dssp             ----CCC--------CCHHHHHHHHHHTCSSGGGCCCHHH
T ss_pred             ----ccC--------CCHHHHHHHHHHcCCCchhCCCHHH
Confidence                011        1257889999999999999999853


No 188
>3pfq_A PKC-B, PKC-beta, protein kinase C beta type; phosphorylation, transferase; HET: TPO SEP ANP; 4.00A {Rattus norvegicus} PDB: 1tbn_A 1tbo_A 2e73_A
Probab=100.00  E-value=9.4e-38  Score=276.19  Aligned_cols=200  Identities=20%  Similarity=0.231  Sum_probs=162.9

Q ss_pred             ccHHHHHHHHHHHHhc-CCCcccceeeeeeeCCcceEEEEecCCCCHHHhhcCCC----chHHHHHHHHHHHhchhhcCC
Q 044022           11 HTYGSCINNITYAAQM-SHNHILKRIGCCLQTPIPILVFQSVEYGTLRDCIFGAP----LPRLKIASDIVNSLAYLHFGF   85 (241)
Q Consensus        11 ~~~~~~~~e~~~l~~l-~h~~iv~~~~~~~~~~~~~lv~e~~~~~sL~~~l~~~~----~~~~~~~~~i~~~l~~lh~~~   85 (241)
                      ...+.+.+|.+++..+ +||||+++++++...+.+++||||+++|+|.+++....    .....++.||+.||.|||   
T Consensus       383 ~~~~~~~~E~~~l~~~~~~~~i~~l~~~~~~~~~~~lV~E~~~gg~L~~~l~~~~~~~~~~~~~~~~qi~~aL~~LH---  459 (674)
T 3pfq_A          383 DDVECTMVEKRVLALPGKPPFLTQLHSCFQTMDRLYFVMEYVNGGDLMYHIQQVGRFKEPHAVFYAAEIAIGLFFLQ---  459 (674)
T ss_dssp             TTTHHHHHHHHHHTCTTCCTTBCCEEEECBCSSEEEEEEECCCSCBHHHHHHHHSSCCHHHHHHHHHHHHHHHHHHH---
T ss_pred             HHHHHHHHHHHHHHhccCCCeEEEEEEEEEeCCEEEEEEeCcCCCcHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHH---
Confidence            4567788999999988 79999999999999999999999999999999986532    256789999999999999   


Q ss_pred             CCCceeccCCCCCeeecCCCCeEEeeccCceecCCCCcceeecccccCCCccCcccccccCCCcchhhHHHHHHHHHHHh
Q 044022           86 PRPIVLRNFKTQNILFNEENVAKWFDFLLSISIPEGETHITTDRVIGTRGYSAPEYISICVLNEKSNVFSFGAFLFELLA  165 (241)
Q Consensus        86 ~~~ivh~dl~~~nil~~~~~~~~l~df~~~~~~~~~~~~~~~~~~~~~~~~~aPE~~~~~~~~~~~Di~s~G~~~~~~~~  165 (241)
                      +.+|+||||||+|||++.++.+||+|||++........  ......||+.|+|||++.+..++.++||||||+++|||++
T Consensus       460 ~~gIiHrDLKp~NILl~~~g~ikL~DFGla~~~~~~~~--~~~~~~GT~~Y~APE~l~~~~~~~~~DvwSlGvilyellt  537 (674)
T 3pfq_A          460 SKGIIYRDLKLDNVMLDSEGHIKIADFGMCKENIWDGV--TTKTFCGTPDYIAPEIIAYQPYGKSVDWWAFGVLLYEMLA  537 (674)
T ss_dssp             HTSEECCCCCSTTEEECSSSCEEECCCTTCEECCCTTC--CBCCCCSCSSSCCHHHHTCCCBSTHHHHHHHHHHHHHHHH
T ss_pred             hCCeEeccCChhhEEEcCCCcEEEeecceeeccccCCc--ccccccCCCcccCHhhhcCCCCCccceEechHHHHHHHHc
Confidence            89999999999999999999999999999986433222  2244679999999999999999999999999999999999


Q ss_pred             cCcccccccccCCCcccchHHHHHHHhhhcccCCCCCCccccCCCchhHHHHHHHHHHHHHHhccCCCCCCCCC
Q 044022          166 GRIHIWDLLKDTHDHGCFFNEYLKNYLEDKRFTGIPAPIIVQDIPCIEKEQQLHASAQLTLECVNNSPEDRPTM  239 (241)
Q Consensus       166 g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~cl~~~p~~Rpt~  239 (241)
                      |+.||...         ...+..........  .     ...        ..+..+.+|+.+||+.||++||++
T Consensus       538 G~~Pf~~~---------~~~~~~~~i~~~~~--~-----~p~--------~~s~~~~~li~~lL~~dP~~R~~~  587 (674)
T 3pfq_A          538 GQAPFEGE---------DEDELFQSIMEHNV--A-----YPK--------SMSKEAVAICKGLMTKHPGKRLGC  587 (674)
T ss_dssp             SSCSSCCS---------SHHHHHHHHHSSCC--C-----CCT--------TSCHHHHHHHHHHSCSSSTTCTTC
T ss_pred             CCCCCCCC---------CHHHHHHHHHhCCC--C-----CCc--------cCCHHHHHHHHHHccCCHHHCCCC
Confidence            99999652         11222222222110  1     111        122578999999999999999997


No 189
>1b6c_B TGF-B superfamily receptor type I; complex (isomerase/protein kinase), receptor serine/threonine kinase; 2.60A {Homo sapiens} SCOP: d.144.1.7 PDB: 1ias_A 2x7o_A* 3faa_A* 3kcf_A*
Probab=100.00  E-value=5.8e-38  Score=256.97  Aligned_cols=219  Identities=21%  Similarity=0.286  Sum_probs=162.2

Q ss_pred             ccHHHHHHHHHHHHh--cCCCcccceeeeeeeCC----cceEEEEecCCCCHHHhhcCCCc---hHHHHHHHHHHHhchh
Q 044022           11 HTYGSCINNITYAAQ--MSHNHILKRIGCCLQTP----IPILVFQSVEYGTLRDCIFGAPL---PRLKIASDIVNSLAYL   81 (241)
Q Consensus        11 ~~~~~~~~e~~~l~~--l~h~~iv~~~~~~~~~~----~~~lv~e~~~~~sL~~~l~~~~~---~~~~~~~~i~~~l~~l   81 (241)
                      .....+.+|++++..  ++||||+++++++....    ..++||||+++|+|.+++.....   ..+.++.+++.||.||
T Consensus        76 ~~~~~~~~e~~~~~~~~l~h~ni~~~~~~~~~~~~~~~~~~lv~e~~~~g~L~~~l~~~~~~~~~~~~i~~~i~~~l~~l  155 (342)
T 1b6c_B           76 REERSWFREAEIYQTVMLRHENILGFIAADNKDNGTWTQLWLVSDYHEHGSLFDYLNRYTVTVEGMIKLALSTASGLAHL  155 (342)
T ss_dssp             GGHHHHHHHHHHHHHSCCCCTTBCCEEEEEECCCSSCCCEEEEECCCTTCBHHHHHHHCCBCHHHHHHHHHHHHHHHHHH
T ss_pred             hhHHHHHHHHHHHHHhhcCCCcEEEEEeeecccCCccceeEEEEeecCCCcHHHHHhccCccHHHHHHHHHHHHHHHHHH
Confidence            345678899999988  79999999999998775    78999999999999999976543   4678999999999999


Q ss_pred             hcCC-----CCCceeccCCCCCeeecCCCCeEEeeccCceecCCCCcce--eecccccCCCccCccccccc------CCC
Q 044022           82 HFGF-----PRPIVLRNFKTQNILFNEENVAKWFDFLLSISIPEGETHI--TTDRVIGTRGYSAPEYISIC------VLN  148 (241)
Q Consensus        82 h~~~-----~~~ivh~dl~~~nil~~~~~~~~l~df~~~~~~~~~~~~~--~~~~~~~~~~~~aPE~~~~~------~~~  148 (241)
                      |...     +.+++||||||+||+++.++.+||+|||.+..........  ......|++.|+|||.+.+.      .++
T Consensus       156 H~~~~~~~~~~~ivH~Dlkp~NIll~~~~~~kL~Dfg~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~  235 (342)
T 1b6c_B          156 HMEIVGTQGKPAIAHRDLKSKNILVKKNGTCCIADLGLAVRHDSATDTIDIAPNHRVGTKRYMAPEVLDDSINMKHFESF  235 (342)
T ss_dssp             HCCBCSTTCBCEEECSCCSGGGEEECTTSCEEECCCTTCEEEETTTTEEEECCCSCCCCGGGCCHHHHTSCCCTTCHHHH
T ss_pred             HHHHhhhcccCCeeeCCCCHHHEEECCCCCEEEEECCCceeccccccccccccccCCcCcccCCHhhhcccccccccccC
Confidence            9321     4689999999999999999999999999997665433221  22345689999999998765      233


Q ss_pred             cchhhHHHHHHHHHHHhc----------CcccccccccCCCcccchHHHHHHHhhhcccCCCCCCccccCCCchhHHHHH
Q 044022          149 EKSNVFSFGAFLFELLAG----------RIHIWDLLKDTHDHGCFFNEYLKNYLEDKRFTGIPAPIIVQDIPCIEKEQQL  218 (241)
Q Consensus       149 ~~~Di~s~G~~~~~~~~g----------~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  218 (241)
                      .++||||||+++|+|++|          ..||.......    ........... .....    +.+...   .......
T Consensus       236 ~~~Di~slG~il~el~tg~~~~~~~~~~~~p~~~~~~~~----~~~~~~~~~~~-~~~~~----~~~~~~---~~~~~~~  303 (342)
T 1b6c_B          236 KRADIYAMGLVFWEIARRCSIGGIHEDYQLPYYDLVPSD----PSVEEMRKVVC-EQKLR----PNIPNR---WQSCEAL  303 (342)
T ss_dssp             HHHHHHHHHHHHHHHHTTBCBTTBCCCCCCTTTTTSCSS----CCHHHHHHHHT-TSCCC----CCCCGG---GGTSHHH
T ss_pred             CcccHHHHHHHHHHHHhccCcCCcccccccCccccCcCc----ccHHHHHHHHH-HHHhC----CCCccc---ccchhHH
Confidence            689999999999999999          67775422111    11122222221 11111    111111   1112566


Q ss_pred             HHHHHHHHHhccCCCCCCCCCCC
Q 044022          219 HASAQLTLECVNNSPEDRPTMVD  241 (241)
Q Consensus       219 ~~~~~l~~~cl~~~p~~Rpt~~e  241 (241)
                      ..+.+++.+||+.||++|||++|
T Consensus       304 ~~l~~li~~cl~~dp~~Rps~~~  326 (342)
T 1b6c_B          304 RVMAKIMRECWYANGAARLTALR  326 (342)
T ss_dssp             HHHHHHHHHHCCSSGGGSCCHHH
T ss_pred             HHHHHHHHHHhccChhhCCCHHH
Confidence            78999999999999999999853


No 190
>3gxj_A TGF-beta receptor type-1; ALK5, kinase, inhibitor, quinazoline, aortic aneurysm, ATP-binding, craniosynostosis, disease mutation, disulfide bond; HET: 855; 1.70A {Homo sapiens} PDB: 1vjy_A* 3gxl_A* 3hmm_A* 3tzm_A* 2wot_A* 2wou_A* 1py5_A* 1rw8_A*
Probab=100.00  E-value=5.3e-40  Score=264.62  Aligned_cols=219  Identities=21%  Similarity=0.288  Sum_probs=149.2

Q ss_pred             ccHHHHHHHHHHHHh--cCCCcccceeeeeeeCC----cceEEEEecCCCCHHHhhcCCCc---hHHHHHHHHHHHhchh
Q 044022           11 HTYGSCINNITYAAQ--MSHNHILKRIGCCLQTP----IPILVFQSVEYGTLRDCIFGAPL---PRLKIASDIVNSLAYL   81 (241)
Q Consensus        11 ~~~~~~~~e~~~l~~--l~h~~iv~~~~~~~~~~----~~~lv~e~~~~~sL~~~l~~~~~---~~~~~~~~i~~~l~~l   81 (241)
                      .....+.+|.+++..  ++||||+++++++....    ..++||||+++|+|.+++.....   ....++.+++.||.||
T Consensus        37 ~~~~~~~~e~~~~~~~~~~h~~i~~~~~~~~~~~~~~~~~~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~i~~~l~~l  116 (303)
T 3gxj_A           37 REERSWFREAEIYQTVMLRHENILGFIAADNKDNGTWTQLWLVSDYHEHGSLFDYLNRYTVTVEGMIKLALSTASGLAHL  116 (303)
T ss_dssp             TTHHHHHHHHHHHTSTTCCC-CBCCEEEEEEEECSSSEEEEEEEECCTTCCHHHHHHHCCBCC-CHHHHC-CHHHHHC-C
T ss_pred             cchhhHHHHHHHHHHHhccCcceeeeeeecccCCCccceeEEEEeccCCCCHHHHHhccCcchHHHHHHHHHHHHHHHHH
Confidence            355678889999988  79999999999998776    78999999999999999976533   5788999999999999


Q ss_pred             hcCC-----CCCceeccCCCCCeeecCCCCeEEeeccCceecCCCCcce--eecccccCCCccCccccccc------CCC
Q 044022           82 HFGF-----PRPIVLRNFKTQNILFNEENVAKWFDFLLSISIPEGETHI--TTDRVIGTRGYSAPEYISIC------VLN  148 (241)
Q Consensus        82 h~~~-----~~~ivh~dl~~~nil~~~~~~~~l~df~~~~~~~~~~~~~--~~~~~~~~~~~~aPE~~~~~------~~~  148 (241)
                      |...     +.+++||||||+|||++.++.+||+|||++..........  ......||+.|+|||++.+.      .++
T Consensus       117 H~~~~~~~~~~~ivH~Dlkp~Nil~~~~~~~kl~DFg~a~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~  196 (303)
T 3gxj_A          117 HMEIVGTQGKPAIAHRDLKSKNILVKKNGTCCIADLGLAVRHDSATDTIDIAPNHRVGTKRYMAPEVLDDSINMKHFESF  196 (303)
T ss_dssp             CCCBCSTTCBC-CCCSCCCGGGC-CCTTCCC-BCCCCC-CCEETTTTEESCC-----CCGGGCCHHHHTTCSCTTCHHHH
T ss_pred             HHHHhhhccCCCEeeCcCCHHHeEECCCCCEEEeecCcceeccCCCcccccccCCCCcCccccCHhhhcCcccccccccC
Confidence            9322     5789999999999999999999999999986554432221  12334689999999998765      344


Q ss_pred             cchhhHHHHHHHHHHHhc----------CcccccccccCCCcccchHHHHHHHhhhcccCCCCCCccccCCCchhHHHHH
Q 044022          149 EKSNVFSFGAFLFELLAG----------RIHIWDLLKDTHDHGCFFNEYLKNYLEDKRFTGIPAPIIVQDIPCIEKEQQL  218 (241)
Q Consensus       149 ~~~Di~s~G~~~~~~~~g----------~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  218 (241)
                      .++||||||+++|+|++|          ..||...........    +...... .....    +.....   ......+
T Consensus       197 ~~~DiwslG~il~el~~g~~~~~~~~~~~~p~~~~~~~~~~~~----~~~~~~~-~~~~~----~~~~~~---~~~~~~~  264 (303)
T 3gxj_A          197 KRADIYAMGLVFWEIARRCSIGGIHEDYQLPYYDLVPSDPSVE----EMRKVVC-EQKLR----PNIPNR---WQSCEAL  264 (303)
T ss_dssp             HHHHHHC-CCCC-CTGGGBCBTTBC-CCCCTTTTTCC-CCCCC-----CHHHHT-TSCCC----CCCCGG---GGSSHHH
T ss_pred             cchhHHHHHHHHHHHHhcCCCccccceeeccccccCCCCccHH----HHHHHHH-HhhcC----CCcccc---ccchhhH
Confidence            689999999999999999          556544222111111    1111111 11111    111111   1112566


Q ss_pred             HHHHHHHHHhccCCCCCCCCCCC
Q 044022          219 HASAQLTLECVNNSPEDRPTMVD  241 (241)
Q Consensus       219 ~~~~~l~~~cl~~~p~~Rpt~~e  241 (241)
                      ..+.+++.+||+.||++|||++|
T Consensus       265 ~~l~~li~~cl~~dP~~Rps~~~  287 (303)
T 3gxj_A          265 RVMAKIMRECWYANGAARLTALR  287 (303)
T ss_dssp             HHHHHHHHTTCCSSGGGSCCHHH
T ss_pred             HHHHHHHHHHhccCcccCCCHHH
Confidence            78999999999999999999853


No 191
>1byg_A CSK, protein (C-terminal SRC kinase); protein kinase, phosphorylation, staurosporine, transferase; HET: STU; 2.40A {Homo sapiens} SCOP: d.144.1.7 PDB: 3d7u_A 3d7t_A*
Probab=100.00  E-value=1.9e-38  Score=252.96  Aligned_cols=199  Identities=22%  Similarity=0.288  Sum_probs=151.0

Q ss_pred             cHHHHHHHHHHHHhcCCCcccceeeeeeeC-CcceEEEEecCCCCHHHhhcCCC------chHHHHHHHHHHHhchhhcC
Q 044022           12 TYGSCINNITYAAQMSHNHILKRIGCCLQT-PIPILVFQSVEYGTLRDCIFGAP------LPRLKIASDIVNSLAYLHFG   84 (241)
Q Consensus        12 ~~~~~~~e~~~l~~l~h~~iv~~~~~~~~~-~~~~lv~e~~~~~sL~~~l~~~~------~~~~~~~~~i~~~l~~lh~~   84 (241)
                      ..+.+.+|++++++++||||+++++++... +..++||||+++++|.+++....      .....++.+++.||.|||  
T Consensus        57 ~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~i~~~l~~lH--  134 (278)
T 1byg_A           57 TAQAFLAEASVMTQLRHSNLVQLLGVIVEEKGGLYIVTEYMAKGSLVDYLRSRGRSVLGGDCLLKFSLDVCEAMEYLE--  134 (278)
T ss_dssp             --HHHHHTHHHHTTCCCTTBCCEEEEECCC--CCEEEECCCTTEEHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHH--
T ss_pred             HHHHHHHHHHHHHhCCCCCEeeEEEEEEcCCCceEEEEecCCCCCHHHHHHhcccccCCHHHHHHHHHHHHHHHHHHH--
Confidence            467799999999999999999999987654 47899999999999999986532      246789999999999999  


Q ss_pred             CCCCceeccCCCCCeeecCCCCeEEeeccCceecCCCCcceeecccccCCCccCcccccccCCCcchhhHHHHHHHHHHH
Q 044022           85 FPRPIVLRNFKTQNILFNEENVAKWFDFLLSISIPEGETHITTDRVIGTRGYSAPEYISICVLNEKSNVFSFGAFLFELL  164 (241)
Q Consensus        85 ~~~~ivh~dl~~~nil~~~~~~~~l~df~~~~~~~~~~~~~~~~~~~~~~~~~aPE~~~~~~~~~~~Di~s~G~~~~~~~  164 (241)
                       +.+++|+||||+||+++.++.++|+|||.+.......     ....+++.|+|||.+.+..++.++||||||+++|+|+
T Consensus       135 -~~~i~H~dlkp~Nil~~~~~~~~l~Dfg~~~~~~~~~-----~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~  208 (278)
T 1byg_A          135 -GNNFVHRDLAARNVLVSEDNVAKVSDFGLTKEASSTQ-----DTGKLPVKWTAPEALREKKFSTKSDVWSFGILLWEIY  208 (278)
T ss_dssp             -HTTCCCSCCSGGGEEECTTSCEEECCCCC-----------------CCTTTSCHHHHHHCCCCHHHHHHHHHHHHHHHH
T ss_pred             -hCCccccCCCcceEEEeCCCcEEEeeccccccccccc-----cCCCccccccCHHHhCCCCCCchhcHHHHHHHHHHHH
Confidence             8999999999999999999999999999987544322     2235678899999999888999999999999999999


Q ss_pred             h-cCcccccccccCCCcccchHHHHHHHhhhcccCCCCCCccccCCCchhHHHHHHHHHHHHHHhccCCCCCCCCCCC
Q 044022          165 A-GRIHIWDLLKDTHDHGCFFNEYLKNYLEDKRFTGIPAPIIVQDIPCIEKEQQLHASAQLTLECVNNSPEDRPTMVD  241 (241)
Q Consensus       165 ~-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~cl~~~p~~Rpt~~e  241 (241)
                      + |..||.....         .+...... .+..     .....        ..++.+.+++.+||+.||++|||+.|
T Consensus       209 t~g~~p~~~~~~---------~~~~~~~~-~~~~-----~~~~~--------~~~~~l~~li~~~l~~~p~~Rps~~~  263 (278)
T 1byg_A          209 SFGRVPYPRIPL---------KDVVPRVE-KGYK-----MDAPD--------GCPPAVYEVMKNCWHLDAAMRPSFLQ  263 (278)
T ss_dssp             TTSCCSCTTSCG---------GGHHHHHT-TTCC-----CCCCT--------TCCHHHHHHHHHHTCSSGGGSCCHHH
T ss_pred             hCCCCCCCCCCH---------HHHHHHHh-cCCC-----CCCcc--------cCCHHHHHHHHHHhcCChhhCCCHHH
Confidence            8 9999965211         11111111 1110     11111        12367899999999999999999753


No 192
>1x8b_A WEE1HU, WEE1-like protein kinase; cell cycle, transferase; HET: 824; 1.81A {Homo sapiens} PDB: 3bi6_A* 3biz_A* 3cqe_A* 3cr0_A* 2in6_A* 2io6_A* 2z2w_A*
Probab=100.00  E-value=1.3e-38  Score=254.52  Aligned_cols=196  Identities=15%  Similarity=0.170  Sum_probs=155.4

Q ss_pred             ccHHHHHHHHHHHHhc-CCCcccceeeeeeeCCcceEEEEecCCCCHHHhhcCC--------CchHHHHHHHHHHHhchh
Q 044022           11 HTYGSCINNITYAAQM-SHNHILKRIGCCLQTPIPILVFQSVEYGTLRDCIFGA--------PLPRLKIASDIVNSLAYL   81 (241)
Q Consensus        11 ~~~~~~~~e~~~l~~l-~h~~iv~~~~~~~~~~~~~lv~e~~~~~sL~~~l~~~--------~~~~~~~~~~i~~~l~~l   81 (241)
                      ....++.+|+..+.++ +||||+++++++...+..++||||+++++|.+++...        ......++.|++.||.||
T Consensus        52 ~~~~~~~~e~~~~~~l~~h~~iv~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~i~~qi~~al~~l  131 (289)
T 1x8b_A           52 VDEQNALREVYAHAVLGQHSHVVRYFSAWAEDDHMLIQNEYCNGGSLADAISENYRIMSYFKEAELKDLLLQVGRGLRYI  131 (289)
T ss_dssp             HHHHHHHHHHHHHHHSCSCTTBCCEEEEEEETTEEEEEEECCTTCBHHHHHHHHHHHTCCCCHHHHHHHHHHHHHHHHHH
T ss_pred             HHHHHHHHHHHHHHHhCCCCCeeeeeeeeecCCeEEEEEEecCCCcHHHHHHhhcccccCCCHHHHHHHHHHHHHHHHHH
Confidence            4567788999999999 9999999999999999999999999999999998652        124678999999999999


Q ss_pred             hcCCCCCceeccCCCCCeeecCC-------------------CCeEEeeccCceecCCCCcceeecccccCCCccCcccc
Q 044022           82 HFGFPRPIVLRNFKTQNILFNEE-------------------NVAKWFDFLLSISIPEGETHITTDRVIGTRGYSAPEYI  142 (241)
Q Consensus        82 h~~~~~~ivh~dl~~~nil~~~~-------------------~~~~l~df~~~~~~~~~~~~~~~~~~~~~~~~~aPE~~  142 (241)
                      |   +.+++||||||+||+++.+                   ..++|+|||.+.......      ...+++.|+|||.+
T Consensus       132 H---~~~ivH~Dikp~NIl~~~~~~~~~~~~~~~~~~~~~~~~~~kl~Dfg~~~~~~~~~------~~~gt~~y~aPE~~  202 (289)
T 1x8b_A          132 H---SMSLVHMDIKPSNIFISRTSIPNAASEEGDEDDWASNKVMFKIGDLGHVTRISSPQ------VEEGDSRFLANEVL  202 (289)
T ss_dssp             H---HTTEECSCCSGGGEEEC--------------------CCCEEECCCTTCEETTCSC------CCCCCGGGCCHHHH
T ss_pred             H---hCCEeecCCCHHHEEEcCCCCCcccccccccccccCCceEEEEcccccccccCCcc------ccCCCccccChhHh
Confidence            9   8999999999999999844                   479999999998765432      23588999999999


Q ss_pred             ccc-CCCcchhhHHHHHHHHHHHhcCcccccccccCCCcccchHHHHHHHhhhcccCCCCCCccccCCCchhHHHHHHHH
Q 044022          143 SIC-VLNEKSNVFSFGAFLFELLAGRIHIWDLLKDTHDHGCFFNEYLKNYLEDKRFTGIPAPIIVQDIPCIEKEQQLHAS  221 (241)
Q Consensus       143 ~~~-~~~~~~Di~s~G~~~~~~~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  221 (241)
                      .+. .++.++||||||+++|+|++|.+|+....            .... ...+...     .+....        +..+
T Consensus       203 ~~~~~~~~~~Di~slG~il~~l~~~~~~~~~~~------------~~~~-~~~~~~~-----~~~~~~--------~~~~  256 (289)
T 1x8b_A          203 QENYTHLPKADIFALALTVVCAAGAEPLPRNGD------------QWHE-IRQGRLP-----RIPQVL--------SQEF  256 (289)
T ss_dssp             TTCCTTHHHHHHHHHHHHHHHHTTCCCCCSSSH------------HHHH-HHTTCCC-----CCSSCC--------CHHH
T ss_pred             cCCCCCCchhhHHHHHHHHHHHhcCCCCCcchh------------HHHH-HHcCCCC-----CCCccc--------CHHH
Confidence            866 56689999999999999999988764310            0111 1111111     111222        2578


Q ss_pred             HHHHHHhccCCCCCCCCCCC
Q 044022          222 AQLTLECVNNSPEDRPTMVD  241 (241)
Q Consensus       222 ~~l~~~cl~~~p~~Rpt~~e  241 (241)
                      .+++.+||+.||++|||+.|
T Consensus       257 ~~li~~~l~~dp~~Rps~~~  276 (289)
T 1x8b_A          257 TELLKVMIHPDPERRPSAMA  276 (289)
T ss_dssp             HHHHHHHTCSSGGGSCCHHH
T ss_pred             HHHHHHHhCCCcccCCCHHH
Confidence            99999999999999999853


No 193
>3g33_A Cell division protein kinase 4; Ser/Thr protein kinase, cell cycle, phosphorylation, ATP-BIN cell division, disease mutation, kinase; 3.00A {Homo sapiens}
Probab=100.00  E-value=3.4e-38  Score=255.03  Aligned_cols=213  Identities=21%  Similarity=0.254  Sum_probs=157.2

Q ss_pred             HHHHHHHHHHHHhcC---CCcccceeeeeeeCC-----cceEEEEecCCCCHHHhhcCCCc------hHHHHHHHHHHHh
Q 044022           13 YGSCINNITYAAQMS---HNHILKRIGCCLQTP-----IPILVFQSVEYGTLRDCIFGAPL------PRLKIASDIVNSL   78 (241)
Q Consensus        13 ~~~~~~e~~~l~~l~---h~~iv~~~~~~~~~~-----~~~lv~e~~~~~sL~~~l~~~~~------~~~~~~~~i~~~l   78 (241)
                      ...+.+|+.++++++   ||||+++++++....     ..++|+||+. ++|.+++.....      .+..++.|++.||
T Consensus        55 ~~~~~~e~~~l~~l~~~~h~niv~~~~~~~~~~~~~~~~~~lv~e~~~-~~L~~~~~~~~~~~~~~~~~~~i~~qi~~al  133 (308)
T 3g33_A           55 PISTVREVALLRRLEAFEHPNVVRLMDVCATSRTDREIKVTLVFEHVD-QDLRTYLDKAPPPGLPAETIKDLMRQFLRGL  133 (308)
T ss_dssp             CHHHHHHHHHHHHHHHHCCTTBCCEEEEEEECCSSSEEEEEEEEECCC-CBHHHHHHTCCTTCSCHHHHHHHHHHHHHHH
T ss_pred             chhHHHHHHHHHHHhhcCCCCeEEeeeeeeccCCCCceeEEEEehhhh-cCHHHHHhhccCCCCCHHHHHHHHHHHHHHH
Confidence            456778888888774   999999999998765     5799999997 699999876532      4678999999999


Q ss_pred             chhhcCCCCCceeccCCCCCeeecCCCCeEEeeccCceecCCCCcceeecccccCCCccCcccccccCCCcchhhHHHHH
Q 044022           79 AYLHFGFPRPIVLRNFKTQNILFNEENVAKWFDFLLSISIPEGETHITTDRVIGTRGYSAPEYISICVLNEKSNVFSFGA  158 (241)
Q Consensus        79 ~~lh~~~~~~ivh~dl~~~nil~~~~~~~~l~df~~~~~~~~~~~~~~~~~~~~~~~~~aPE~~~~~~~~~~~Di~s~G~  158 (241)
                      .|||   +.+++||||||+||+++.++.+||+|||.+........   .....+|+.|+|||++.+..++.++||||||+
T Consensus       134 ~~lH---~~~ivH~Dlkp~Nil~~~~~~~kl~Dfg~a~~~~~~~~---~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~  207 (308)
T 3g33_A          134 DFLH---ANCIVHRDLKPENILVTSGGTVKLADFGLARIYSYQMA---LTPVVVTLWYRAPEVLLQSTYATPVDMWSVGC  207 (308)
T ss_dssp             HHHH---HTTCCCSCCCTTTEEECTTSCEEECSCSCTTTSTTCCC---SGGGGCCCSSCCHHHHHTSCCCSTHHHHHHHH
T ss_pred             HHHH---HCCcccCCCCHHHEEEcCCCCEEEeeCccccccCCCcc---cCCccccccccCchHHcCCCCCchHHHHHHHH
Confidence            9999   89999999999999999999999999999976543322   23457899999999999899999999999999


Q ss_pred             HHHHHHhcCcccccccccCCCcccchHHHHHHHhhh---cccCCCCC------CccccCCCch---hHHHHHHHHHHHHH
Q 044022          159 FLFELLAGRIHIWDLLKDTHDHGCFFNEYLKNYLED---KRFTGIPA------PIIVQDIPCI---EKEQQLHASAQLTL  226 (241)
Q Consensus       159 ~~~~~~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~------~~~~~~~~~~---~~~~~~~~~~~l~~  226 (241)
                      ++|+|++|+.||....         ..+........   ......+.      .......+..   .....++.+.+|+.
T Consensus       208 il~~l~~g~~pf~~~~---------~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~  278 (308)
T 3g33_A          208 IFAEMFRRKPLFCGNS---------EADQLGKIFDLIGLPPEDDWPRDVSLPRGAFPPRGPRPVQSVVPEMEESGAQLLL  278 (308)
T ss_dssp             HHHHTTTSSCSCCCSS---------HHHHHHHHHHHHCCCCTTTSCSSCSSCGGGSCCCCCCCHHHHSCSCCHHHHHHHH
T ss_pred             HHHHHHhCCCCCCCCC---------HHHHHHHHHHHhCCCChhhccchhhccccccCCCCCCcHHHhCccccHHHHHHHH
Confidence            9999999999995521         11111111110   00000000      0000000000   00123367889999


Q ss_pred             HhccCCCCCCCCCCC
Q 044022          227 ECVNNSPEDRPTMVD  241 (241)
Q Consensus       227 ~cl~~~p~~Rpt~~e  241 (241)
                      +||+.||++|||+.|
T Consensus       279 ~~L~~dP~~R~t~~e  293 (308)
T 3g33_A          279 EMLTFNPHKRISAFR  293 (308)
T ss_dssp             HHTCSSTTTSCCHHH
T ss_pred             HHhcCCCccCCCHHH
Confidence            999999999999853


No 194
>2w1i_A JAK2; chromosomal rearrangement, nucleotide-binding, tyrosine-protein kinase, proto-oncogene, phosphoprotein, disease mutation, SH2 domain; HET: PTR L0I; 2.60A {Homo sapiens}
Probab=100.00  E-value=1.7e-38  Score=258.87  Aligned_cols=215  Identities=23%  Similarity=0.317  Sum_probs=160.3

Q ss_pred             ccHHHHHHHHHHHHhcCCCcccceeeeeeeCC--cceEEEEecCCCCHHHhhcCCC--c---hHHHHHHHHHHHhchhhc
Q 044022           11 HTYGSCINNITYAAQMSHNHILKRIGCCLQTP--IPILVFQSVEYGTLRDCIFGAP--L---PRLKIASDIVNSLAYLHF   83 (241)
Q Consensus        11 ~~~~~~~~e~~~l~~l~h~~iv~~~~~~~~~~--~~~lv~e~~~~~sL~~~l~~~~--~---~~~~~~~~i~~~l~~lh~   83 (241)
                      ...+.+.+|++++++++||||+++++++...+  ..++||||+++++|.+++....  .   ..+.++.+++.||.||| 
T Consensus        84 ~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~i~~qi~~aL~~LH-  162 (326)
T 2w1i_A           84 EHLRDFEREIEILKSLQHDNIVKYKGVCYSAGRRNLKLIMEYLPYGSLRDYLQKHKERIDHIKLLQYTSQICKGMEYLG-  162 (326)
T ss_dssp             HHHHHHHHHHHHHHTCCCTTBCCEEEEECC----CCEEEECCCTTCBHHHHHHHSTTSSCHHHHHHHHHHHHHHHHHHH-
T ss_pred             HHHHHHHHHHHHHHhCCCCCeeeEEEEEEecCCCceEEEEECCCCCCHHHHHHhcccCCCHHHHHHHHHHHHHHHHHHH-
Confidence            45678999999999999999999999987644  7899999999999999986542  1   46789999999999999 


Q ss_pred             CCCCCceeccCCCCCeeecCCCCeEEeeccCceecCCCCccee-ecccccCCCccCcccccccCCCcchhhHHHHHHHHH
Q 044022           84 GFPRPIVLRNFKTQNILFNEENVAKWFDFLLSISIPEGETHIT-TDRVIGTRGYSAPEYISICVLNEKSNVFSFGAFLFE  162 (241)
Q Consensus        84 ~~~~~ivh~dl~~~nil~~~~~~~~l~df~~~~~~~~~~~~~~-~~~~~~~~~~~aPE~~~~~~~~~~~Di~s~G~~~~~  162 (241)
                        +.+++|+||||+||+++.++.++|+|||.+........... .....++..|+|||.+.+..++.++||||||+++|+
T Consensus       163 --~~~ivH~dikp~NIli~~~~~~kL~Dfg~~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~e  240 (326)
T 2w1i_A          163 --TKRYIHRDLATRNILVENENRVKIGDFGLTKVLPQDKEYYKVKEPGESPIFWYAPESLTESKFSVASDVWSFGVVLYE  240 (326)
T ss_dssp             --HTTEECSCCCGGGEEEEETTEEEECCCTTCEECCSSCSEEECSSCCSCCGGGCCHHHHHHCEEEHHHHHHHHHHHHHH
T ss_pred             --hCCEeccCCCcceEEEcCCCcEEEecCcchhhccccccccccccCCCCceeEECchhhcCCCCCchhhHHHHHHHHHH
Confidence              89999999999999999999999999999987655432211 223346777999999998889999999999999999


Q ss_pred             HHhcCcccccccccC------CCcccchHHHHHHHhhhcccCCCCCCccccCCCchhHHHHHHHHHHHHHHhccCCCCCC
Q 044022          163 LLAGRIHIWDLLKDT------HDHGCFFNEYLKNYLEDKRFTGIPAPIIVQDIPCIEKEQQLHASAQLTLECVNNSPEDR  236 (241)
Q Consensus       163 ~~~g~~p~~~~~~~~------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~cl~~~p~~R  236 (241)
                      |++|..|+.......      .......................     ..        ..+..+.+++.+||+.||++|
T Consensus       241 l~tg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-----~~--------~~~~~l~~li~~cl~~dP~~R  307 (326)
T 2w1i_A          241 LFTYIEKSKSPPAEFMRMIGNDKQGQMIVFHLIELLKNNGRLPR-----PD--------GCPDEIYMIMTECWNNNVNQR  307 (326)
T ss_dssp             HHHTTCGGGSHHHHHHHHHCTTCCTHHHHHHHHHHHHTTCCCCC-----CT--------TCCHHHHHHHHHHSCSSGGGS
T ss_pred             HHhcCCCCCCCHHHHHHhhccccchhhhHHHHHHHhhcCCCCCC-----CC--------cccHHHHHHHHHHcCCChhhC
Confidence            999999986421100      00000001111111111111111     11        223678999999999999999


Q ss_pred             CCCCC
Q 044022          237 PTMVD  241 (241)
Q Consensus       237 pt~~e  241 (241)
                      ||+.|
T Consensus       308 ps~~e  312 (326)
T 2w1i_A          308 PSFRD  312 (326)
T ss_dssp             CCHHH
T ss_pred             cCHHH
Confidence            99753


No 195
>3nsz_A CK II alpha, casein kinase II subunit alpha; inhibitor, transferase-transferase inhibitor CO; HET: ANP; 1.30A {Homo sapiens} SCOP: d.144.1.7 PDB: 2r7i_A 3pe1_A* 1jwh_A* 3pe2_A* 3r0t_A* 3h30_A* 3q9w_A* 3q9x_A* 3q9y_A* 3q9z_A* 3qa0_A 3bqc_A* 2rkp_A* 3c13_A* 3fwq_A 3rps_A* 3u9c_A* 4fbx_A* 3mb7_A* 3mb6_A* ...
Probab=100.00  E-value=5.8e-38  Score=255.86  Aligned_cols=156  Identities=16%  Similarity=0.247  Sum_probs=135.8

Q ss_pred             ccHHHHHHHHHHHHhcC-CCcccceeeeeee--CCcceEEEEecCCCCHHHhhcCCCc-hHHHHHHHHHHHhchhhcCCC
Q 044022           11 HTYGSCINNITYAAQMS-HNHILKRIGCCLQ--TPIPILVFQSVEYGTLRDCIFGAPL-PRLKIASDIVNSLAYLHFGFP   86 (241)
Q Consensus        11 ~~~~~~~~e~~~l~~l~-h~~iv~~~~~~~~--~~~~~lv~e~~~~~sL~~~l~~~~~-~~~~~~~~i~~~l~~lh~~~~   86 (241)
                      ...+.+.+|++++++++ ||||+++++++..  ....++||||+.+++|.+++..... ....++.+++.||.|||   +
T Consensus        72 ~~~~~~~~E~~~l~~l~~~~~i~~~~~~~~~~~~~~~~lv~e~~~~~~l~~~~~~~~~~~~~~~~~qi~~~l~~lH---~  148 (330)
T 3nsz_A           72 VKKKKIKREIKILENLRGGPNIITLADIVKDPVSRTPALVFEHVNNTDFKQLYQTLTDYDIRFYMYEILKALDYCH---S  148 (330)
T ss_dssp             CCHHHHHHHHHHHHHHTTSTTBCCEEEEEECTTTCCEEEEEECCCCCCHHHHGGGCCHHHHHHHHHHHHHHHHHHH---H
T ss_pred             cchHHHHHHHHHHHHcCCCCCEEEeeeeeccCCCCceEEEEeccCchhHHHHHHhCCHHHHHHHHHHHHHHHHHHH---h
Confidence            34678999999999997 9999999999987  5678999999999999999876544 56789999999999999   8


Q ss_pred             CCceeccCCCCCeeecCCC-CeEEeeccCceecCCCCcceeecccccCCCccCcccccc-cCCCcchhhHHHHHHHHHHH
Q 044022           87 RPIVLRNFKTQNILFNEEN-VAKWFDFLLSISIPEGETHITTDRVIGTRGYSAPEYISI-CVLNEKSNVFSFGAFLFELL  164 (241)
Q Consensus        87 ~~ivh~dl~~~nil~~~~~-~~~l~df~~~~~~~~~~~~~~~~~~~~~~~~~aPE~~~~-~~~~~~~Di~s~G~~~~~~~  164 (241)
                      .+++||||||+|||++.++ .++|+|||.+........   .....++..|+|||.+.+ ..++.++||||||+++|+|+
T Consensus       149 ~~ivH~Dikp~Nil~~~~~~~~kl~Dfg~a~~~~~~~~---~~~~~~~~~y~aPE~~~~~~~~~~~~DiwslG~il~~ll  225 (330)
T 3nsz_A          149 MGIMHRDVKPHNVMIDHEHRKLRLIDWGLAEFYHPGQE---YNVRVASRYFKGPELLVDYQMYDYSLDMWSLGCMLASMI  225 (330)
T ss_dssp             TTEECCCCSGGGEEEETTTTEEEECCCTTCEECCTTCC---CCSCCSCGGGCCHHHHTTCCCCCTHHHHHHHHHHHHHHH
T ss_pred             CCeeeCCCCHHHEEEcCCCCEEEEEeCCCceEcCCCCc---cccccccccccChhhhcCCCcCCchhhHHHHHHHHHHHH
Confidence            9999999999999999777 899999999986654332   133468889999999877 56899999999999999999


Q ss_pred             hcCccccc
Q 044022          165 AGRIHIWD  172 (241)
Q Consensus       165 ~g~~p~~~  172 (241)
                      +|+.||..
T Consensus       226 ~g~~p~~~  233 (330)
T 3nsz_A          226 FRKEPFFH  233 (330)
T ss_dssp             HTCSSSSC
T ss_pred             hCCCCccc
Confidence            99999954


No 196
>2y7j_A Phosphorylase B kinase gamma catalytic chain, testis/liver isoform; transferase; HET: B49; 2.50A {Homo sapiens} PDB: 1h0t_A 1lp1_B 1q2n_A 2spz_A 3mzw_B* 1ss1_A 2jwd_A 1bdc_A 1bdd_A 1fc2_C* 2b87_A 2b88_A 1h0t_B 1lp1_A 2b87_B 2b89_A 3s1k_A
Probab=100.00  E-value=1.8e-38  Score=262.51  Aligned_cols=203  Identities=24%  Similarity=0.383  Sum_probs=159.4

Q ss_pred             HHHHHHHHHHHHhc-CCCcccceeeeeeeCCcceEEEEecCCCCHHHhhcCCC----chHHHHHHHHHHHhchhhcCCCC
Q 044022           13 YGSCINNITYAAQM-SHNHILKRIGCCLQTPIPILVFQSVEYGTLRDCIFGAP----LPRLKIASDIVNSLAYLHFGFPR   87 (241)
Q Consensus        13 ~~~~~~e~~~l~~l-~h~~iv~~~~~~~~~~~~~lv~e~~~~~sL~~~l~~~~----~~~~~~~~~i~~~l~~lh~~~~~   87 (241)
                      .+.+.+|+.+++++ +||||+++++++...+..++||||+++++|.+++....    .....++.+++.||.|||   +.
T Consensus       143 ~~~~~~E~~~l~~l~~hp~iv~~~~~~~~~~~~~lv~e~~~g~~L~~~l~~~~~l~~~~~~~i~~qi~~~L~~LH---~~  219 (365)
T 2y7j_A          143 REATRRETHILRQVAGHPHIITLIDSYESSSFMFLVFDLMRKGELFDYLTEKVALSEKETRSIMRSLLEAVSFLH---AN  219 (365)
T ss_dssp             HHHHHHHHHHHHHHTTCTTBCCEEEEEEBSSEEEEEECCCTTCBHHHHHHHHSSCCHHHHHHHHHHHHHHHHHHH---HT
T ss_pred             HHHHHHHHHHHHHhcCCCCEeEEEEEEeeCCEEEEEEEeCCCCcHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHH---hC
Confidence            56688999999999 89999999999999999999999999999999986432    246789999999999999   89


Q ss_pred             CceeccCCCCCeeecCCCCeEEeeccCceecCCCCcceeecccccCCCccCcccccc------cCCCcchhhHHHHHHHH
Q 044022           88 PIVLRNFKTQNILFNEENVAKWFDFLLSISIPEGETHITTDRVIGTRGYSAPEYISI------CVLNEKSNVFSFGAFLF  161 (241)
Q Consensus        88 ~ivh~dl~~~nil~~~~~~~~l~df~~~~~~~~~~~~~~~~~~~~~~~~~aPE~~~~------~~~~~~~Di~s~G~~~~  161 (241)
                      +++|+||||+||+++.++.++|+|||++.........   ....||+.|+|||++.+      ..++.++||||||+++|
T Consensus       220 gi~H~Dlkp~NIl~~~~~~ikl~DfG~~~~~~~~~~~---~~~~gt~~y~aPE~~~~~~~~~~~~~~~~~Di~slG~il~  296 (365)
T 2y7j_A          220 NIVHRDLKPENILLDDNMQIRLSDFGFSCHLEPGEKL---RELCGTPGYLAPEILKCSMDETHPGYGKEVDLWACGVILF  296 (365)
T ss_dssp             TEECSCCSGGGEEECTTCCEEECCCTTCEECCTTCCB---CCCCSCGGGCCHHHHHHTTCTTSCCBCTTHHHHHHHHHHH
T ss_pred             CeecCCCCHHHEEECCCCCEEEEecCcccccCCCccc---ccCCCCCCccChhhccccccccCcCCCchhhHHhHHHHHH
Confidence            9999999999999999999999999998876543321   33578999999999863      35788999999999999


Q ss_pred             HHHhcCcccccccccCCCcccchHHHHHHHhhhcccCCCCCCccccCCCchhHHHHHHHHHHHHHHhccCCCCCCCCCCC
Q 044022          162 ELLAGRIHIWDLLKDTHDHGCFFNEYLKNYLEDKRFTGIPAPIIVQDIPCIEKEQQLHASAQLTLECVNNSPEDRPTMVD  241 (241)
Q Consensus       162 ~~~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~cl~~~p~~Rpt~~e  241 (241)
                      +|++|..||....         ......... .+... ...+         .....+..+.+++.+||+.||++|||++|
T Consensus       297 ell~g~~pf~~~~---------~~~~~~~i~-~~~~~-~~~~---------~~~~~~~~~~~li~~~L~~dP~~Rps~~e  356 (365)
T 2y7j_A          297 TLLAGSPPFWHRR---------QILMLRMIM-EGQYQ-FSSP---------EWDDRSSTVKDLISRLLQVDPEARLTAEQ  356 (365)
T ss_dssp             HHHHSSCSSCCSS---------HHHHHHHHH-HTCCC-CCHH---------HHSSSCHHHHHHHHHHSCSSTTTSCCHHH
T ss_pred             HHHHCCCCCCCCC---------HHHHHHHHH-hCCCC-CCCc---------ccccCCHHHHHHHHHHcCCChhHCcCHHH
Confidence            9999999996521         111111111 11110 0000         00122356889999999999999999853


No 197
>2a19_B Interferon-induced, double-stranded RNA-activated kinase; transferase, protein biosynthesis, protein synthesis transferase complex; HET: TPO ANP; 2.50A {Homo sapiens} PDB: 2a1a_B*
Probab=100.00  E-value=2.9e-38  Score=252.19  Aligned_cols=194  Identities=23%  Similarity=0.342  Sum_probs=155.6

Q ss_pred             HHHHHHHHHHHhcCCCcccceeeeeee----------------CCcceEEEEecCCCCHHHhhcCC---Cc---hHHHHH
Q 044022           14 GSCINNITYAAQMSHNHILKRIGCCLQ----------------TPIPILVFQSVEYGTLRDCIFGA---PL---PRLKIA   71 (241)
Q Consensus        14 ~~~~~e~~~l~~l~h~~iv~~~~~~~~----------------~~~~~lv~e~~~~~sL~~~l~~~---~~---~~~~~~   71 (241)
                      +.+.+|++++++++||||+++++++..                ....++||||+++++|.+++...   ..   ....++
T Consensus        49 ~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~i~  128 (284)
T 2a19_B           49 EKAEREVKALAKLDHVNIVHYNGCWDGFDYDPETSSKNSSRSKTKCLFIQMEFCDKGTLEQWIEKRRGEKLDKVLALELF  128 (284)
T ss_dssp             GGGHHHHHHHHHCCCTTBCCEEEEEEEEEEC---------CCEEEEEEEEECCCCSCBHHHHHHHGGGSCCCHHHHHHHH
T ss_pred             HHHHHHHHHHHhCCCCCEEEEeeeEeccccCcccccccccccCcceEEEEEeccCCCCHHHHHhhccCCCCCHHHHHHHH
Confidence            567899999999999999999998864                34579999999999999998543   11   467899


Q ss_pred             HHHHHHhchhhcCCCCCceeccCCCCCeeecCCCCeEEeeccCceecCCCCcceeecccccCCCccCcccccccCCCcch
Q 044022           72 SDIVNSLAYLHFGFPRPIVLRNFKTQNILFNEENVAKWFDFLLSISIPEGETHITTDRVIGTRGYSAPEYISICVLNEKS  151 (241)
Q Consensus        72 ~~i~~~l~~lh~~~~~~ivh~dl~~~nil~~~~~~~~l~df~~~~~~~~~~~~~~~~~~~~~~~~~aPE~~~~~~~~~~~  151 (241)
                      .+++.||.|||   +.+++|+||||+||+++.++.++|+|||.+.........   ....+++.|+|||.+.+..++.++
T Consensus       129 ~qi~~~l~~lH---~~~i~H~dlkp~Nil~~~~~~~kl~Dfg~~~~~~~~~~~---~~~~~~~~y~aPE~~~~~~~~~~~  202 (284)
T 2a19_B          129 EQITKGVDYIH---SKKLINRDLKPSNIFLVDTKQVKIGDFGLVTSLKNDGKR---TRSKGTLRYMSPEQISSQDYGKEV  202 (284)
T ss_dssp             HHHHHHHHHHH---HTTEECSCCSGGGEEEEETTEEEECCCTTCEESSCCSCC---CCCCSCCTTSCHHHHHCSCCCTHH
T ss_pred             HHHHHHHHHHH---hCCeeeccCCHHHEEEcCCCCEEECcchhheeccccccc---cccCCcccccChhhhccCCCcchh
Confidence            99999999999   899999999999999999999999999999876554321   234689999999999988899999


Q ss_pred             hhHHHHHHHHHHHhcCcccccccccCCCcccchHHHHHHHhhhcccCCCCCCccccCCCchhHHHHHHHHHHHHHHhccC
Q 044022          152 NVFSFGAFLFELLAGRIHIWDLLKDTHDHGCFFNEYLKNYLEDKRFTGIPAPIIVQDIPCIEKEQQLHASAQLTLECVNN  231 (241)
Q Consensus       152 Di~s~G~~~~~~~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~cl~~  231 (241)
                      ||||||+++|+|++|..|+...           ....... .....        ...        .+..+.+++.+||+.
T Consensus       203 Di~slG~il~~l~~~~~~~~~~-----------~~~~~~~-~~~~~--------~~~--------~~~~~~~li~~~l~~  254 (284)
T 2a19_B          203 DLYALGLILAELLHVCDTAFET-----------SKFFTDL-RDGII--------SDI--------FDKKEKTLLQKLLSK  254 (284)
T ss_dssp             HHHHHHHHHHHHHSCCSSHHHH-----------HHHHHHH-HTTCC--------CTT--------SCHHHHHHHHHHTCS
T ss_pred             hhHHHHHHHHHHHhcCCcchhH-----------HHHHHHh-hcccc--------ccc--------CCHHHHHHHHHHccC
Confidence            9999999999999999887431           0111111 11111        111        125688999999999


Q ss_pred             CCCCCCCCCC
Q 044022          232 SPEDRPTMVD  241 (241)
Q Consensus       232 ~p~~Rpt~~e  241 (241)
                      ||++|||+.|
T Consensus       255 dp~~Rps~~e  264 (284)
T 2a19_B          255 KPEDRPNTSE  264 (284)
T ss_dssp             SGGGSCCHHH
T ss_pred             ChhhCcCHHH
Confidence            9999999753


No 198
>2j0j_A Focal adhesion kinase 1; cell migration, FERM, transferase, integrin signaling; HET: 4ST; 2.80A {Gallus gallus} PDB: 2j0k_A*
Probab=100.00  E-value=3.4e-38  Score=278.27  Aligned_cols=205  Identities=20%  Similarity=0.278  Sum_probs=157.6

Q ss_pred             ccccHHHHHHHHHHHHhcCCCcccceeeeeeeCCcceEEEEecCCCCHHHhhcCCC--c---hHHHHHHHHHHHhchhhc
Q 044022            9 HRHTYGSCINNITYAAQMSHNHILKRIGCCLQTPIPILVFQSVEYGTLRDCIFGAP--L---PRLKIASDIVNSLAYLHF   83 (241)
Q Consensus         9 ~~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~~~~~~~lv~e~~~~~sL~~~l~~~~--~---~~~~~~~~i~~~l~~lh~   83 (241)
                      .....+.|.+|+.++++++||||+++++++. .+..++||||+++|+|.+++....  .   ..+.++.+++.||.||| 
T Consensus       431 ~~~~~~~~~~E~~~l~~l~HpnIv~l~~~~~-~~~~~lv~E~~~~g~L~~~l~~~~~~l~~~~~~~i~~qi~~aL~~LH-  508 (656)
T 2j0j_A          431 SDSVREKFLQEALTMRQFDHPHIVKLIGVIT-ENPVWIIMELCTLGELRSFLQVRKFSLDLASLILYAYQLSTALAYLE-  508 (656)
T ss_dssp             CHHHHHHHHHHHHHHHHCCCTTBCCEEEEEC-SSSCEEEEECCTTCBHHHHHHHTTTTCCHHHHHHHHHHHHHHHHHHH-
T ss_pred             CHHHHHHHHHHHHHHHhCCCCCCCeEEEEEe-cCceEEEEEcCCCCcHHHHHHhccCCCCHHHHHHHHHHHHHHHHHHH-
Confidence            3344578999999999999999999999985 456899999999999999986442  1   46788999999999999 


Q ss_pred             CCCCCceeccCCCCCeeecCCCCeEEeeccCceecCCCCcceeecccccCCCccCcccccccCCCcchhhHHHHHHHHHH
Q 044022           84 GFPRPIVLRNFKTQNILFNEENVAKWFDFLLSISIPEGETHITTDRVIGTRGYSAPEYISICVLNEKSNVFSFGAFLFEL  163 (241)
Q Consensus        84 ~~~~~ivh~dl~~~nil~~~~~~~~l~df~~~~~~~~~~~~~~~~~~~~~~~~~aPE~~~~~~~~~~~Di~s~G~~~~~~  163 (241)
                        +.+++||||||+|||++.++.+||+|||++......... ......+++.|+|||++.+..++.++||||||+++|+|
T Consensus       509 --~~givHrDikp~NILl~~~~~vkL~DFG~a~~~~~~~~~-~~~~~~~t~~y~aPE~~~~~~~~~~~DiwSlG~il~el  585 (656)
T 2j0j_A          509 --SKRFVHRDIAARNVLVSSNDCVKLGDFGLSRYMEDSTYY-KASKGKLPIKWMAPESINFRRFTSASDVWMFGVCMWEI  585 (656)
T ss_dssp             --HTTCCCSCCSGGGEEEEETTEEEECCCCCCCSCCC-----------CCGGGCCHHHHHHCCCCHHHHHHHHHHHHHHH
T ss_pred             --hCCccccccchHhEEEeCCCCEEEEecCCCeecCCCcce-eccCCCCCcceeCHHHhcCCCCCchhhHHHHHHHHHHH
Confidence              899999999999999999999999999999766443221 12234567889999999988999999999999999999


Q ss_pred             Hh-cCcccccccccCCCcccchHHHHHHHhhhcccCCCCCCccccCCCchhHHHHHHHHHHHHHHhccCCCCCCCCCCC
Q 044022          164 LA-GRIHIWDLLKDTHDHGCFFNEYLKNYLEDKRFTGIPAPIIVQDIPCIEKEQQLHASAQLTLECVNNSPEDRPTMVD  241 (241)
Q Consensus       164 ~~-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~cl~~~p~~Rpt~~e  241 (241)
                      ++ |..||....         ..+....... +....     ....        .+..+.+++.+||+.||++|||+.|
T Consensus       586 lt~g~~Pf~~~~---------~~~~~~~i~~-~~~~~-----~~~~--------~~~~l~~li~~~l~~dP~~RPs~~e  641 (656)
T 2j0j_A          586 LMHGVKPFQGVK---------NNDVIGRIEN-GERLP-----MPPN--------CPPTLYSLMTKCWAYDPSRRPRFTE  641 (656)
T ss_dssp             HTTSCCTTTTCC---------HHHHHHHHHH-TCCCC-----CCTT--------CCHHHHHHHHHHTCSSGGGSCCHHH
T ss_pred             HHcCCCCCCCCC---------HHHHHHHHHc-CCCCC-----CCcc--------ccHHHHHHHHHHcCCChhHCcCHHH
Confidence            97 999996421         1122222211 11111     1111        2257889999999999999999753


No 199
>3e7e_A HBUB1, BUB1A, mitotic checkpoint serine/threonine-protein kinas; spindle assembly checkpoint, mitosis, kinase, activation, KE CDC20, ATP-binding; HET: ATP; 2.31A {Homo sapiens}
Probab=100.00  E-value=1.8e-37  Score=256.56  Aligned_cols=198  Identities=15%  Similarity=0.118  Sum_probs=159.3

Q ss_pred             ccHHHHHHHHHHHHhcC---CCcccceeeeeeeCCcceEEEEecCCCCHHHhhcC------CCc---hHHHHHHHHHHHh
Q 044022           11 HTYGSCINNITYAAQMS---HNHILKRIGCCLQTPIPILVFQSVEYGTLRDCIFG------APL---PRLKIASDIVNSL   78 (241)
Q Consensus        11 ~~~~~~~~e~~~l~~l~---h~~iv~~~~~~~~~~~~~lv~e~~~~~sL~~~l~~------~~~---~~~~~~~~i~~~l   78 (241)
                      ....++.+|+++++.++   |+||+++++++...+..++||||+++|+|.+++..      ...   .+..++.|++.||
T Consensus       106 ~~~~~~~~e~~~~~~l~~~~~~~iv~~~~~~~~~~~~~lv~e~~~~g~L~~~l~~~~~~~~~~l~~~~~~~i~~qi~~~L  185 (365)
T 3e7e_A          106 ANPWEFYIGTQLMERLKPSMQHMFMKFYSAHLFQNGSVLVGELYSYGTLLNAINLYKNTPEKVMPQGLVISFAMRMLYMI  185 (365)
T ss_dssp             CCHHHHHHHHHHHHHSCGGGGGGBCCEEEEEECSSCEEEEECCCCSCBHHHHHHHHHTSTTCSCCHHHHHHHHHHHHHHH
T ss_pred             CChhHHHHHHHHHHHhhhhhhhhhhhhheeeecCCCcEEEEeccCCCcHHHHHHHhhcccccCCCHHHHHHHHHHHHHHH
Confidence            35667889999999997   89999999999999999999999999999999863      111   4788999999999


Q ss_pred             chhhcCCCCCceeccCCCCCeeecC-----------CCCeEEeeccCceecCCCCcceeecccccCCCccCcccccccCC
Q 044022           79 AYLHFGFPRPIVLRNFKTQNILFNE-----------ENVAKWFDFLLSISIPEGETHITTDRVIGTRGYSAPEYISICVL  147 (241)
Q Consensus        79 ~~lh~~~~~~ivh~dl~~~nil~~~-----------~~~~~l~df~~~~~~~~~~~~~~~~~~~~~~~~~aPE~~~~~~~  147 (241)
                      .|||   +++|+||||||+|||++.           ++.+||+|||++................||+.|+|||++.+..+
T Consensus       186 ~~lH---~~~ivHrDiKp~NIll~~~~~~~~~~~~~~~~~kl~DFG~a~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~  262 (365)
T 3e7e_A          186 EQVH---DCEIIHGDIKPDNFILGNGFLEQDDEDDLSAGLALIDLGQSIDMKLFPKGTIFTAKCETSGFQCVEMLSNKPW  262 (365)
T ss_dssp             HHHH---TTTEECCCCSGGGEEECGGGTCC------CTTEEECCCTTCEEGGGSCTTEEECCSSCTTSCCCHHHHTTCCB
T ss_pred             HHHh---hCCeecCCCCHHHEEecccccCccccccccCCEEEeeCchhhhhhccCCCceeeeecCCCCCCChHHhcCCCC
Confidence            9999   899999999999999998           89999999999976543333333455679999999999999999


Q ss_pred             CcchhhHHHHHHHHHHHhcCcccccccccCCCcccchHHHHHHHhhhcccCCCCCCccccCCCchhHHHHHHHHHHHHHH
Q 044022          148 NEKSNVFSFGAFLFELLAGRIHIWDLLKDTHDHGCFFNEYLKNYLEDKRFTGIPAPIIVQDIPCIEKEQQLHASAQLTLE  227 (241)
Q Consensus       148 ~~~~Di~s~G~~~~~~~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~  227 (241)
                      +.++||||||+++|+|++|+.||.......                 ......     ....+      ..+.+.+++..
T Consensus       263 ~~~~DiwslG~il~elltg~~pf~~~~~~~-----------------~~~~~~-----~~~~~------~~~~~~~~~~~  314 (365)
T 3e7e_A          263 NYQIDYFGVAATVYCMLFGTYMKVKNEGGE-----------------CKPEGL-----FRRLP------HLDMWNEFFHV  314 (365)
T ss_dssp             STHHHHHHHHHHHHHHHHSSCCCEEEETTE-----------------EEECSC-----CTTCS------SHHHHHHHHHH
T ss_pred             CccccHHHHHHHHHHHHhCCCccccCCCCc-----------------eeechh-----ccccC------cHHHHHHHHHH
Confidence            999999999999999999999985421110                 000000     00011      12467789999


Q ss_pred             hccCCCCCCCCC
Q 044022          228 CVNNSPEDRPTM  239 (241)
Q Consensus       228 cl~~~p~~Rpt~  239 (241)
                      |++.+|.+|++.
T Consensus       315 ~l~~~p~~r~~~  326 (365)
T 3e7e_A          315 MLNIPDCHHLPS  326 (365)
T ss_dssp             HHCCCCTTCCCC
T ss_pred             HcCCCCCCcchH
Confidence            999999999764


No 200
>3qyz_A Mitogen-activated protein kinase 1; transferase, serine/threonine-protein kinase, ATP-binding CE phosphorylation; HET: CME Z8B SO4; 1.46A {Rattus norvegicus} PDB: 2fys_B 1erk_A* 3qyi_A* 3erk_A* 3qyw_A* 4erk_A* 4gsb_A* 4gt3_A* 4gva_A* 2z7l_A* 2erk_A* 1gol_A* 2gph_A 3zu7_A 3zuv_A* 3o71_A 3r63_A 3c9w_A* 2y9q_A* 4fmq_A* ...
Probab=100.00  E-value=4.5e-38  Score=260.06  Aligned_cols=168  Identities=21%  Similarity=0.229  Sum_probs=138.3

Q ss_pred             CcccccccccccHHHHHHHHHHHHhcCCCcccceeeeeeeC-----CcceEEEEecCCCCHHHhhcCCCc---hHHHHHH
Q 044022            1 MKFYGHEYHRHTYGSCINNITYAAQMSHNHILKRIGCCLQT-----PIPILVFQSVEYGTLRDCIFGAPL---PRLKIAS   72 (241)
Q Consensus         1 iK~~~~~~~~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~~~-----~~~~lv~e~~~~~sL~~~l~~~~~---~~~~~~~   72 (241)
                      ||.+.........+.+.+|++++++++||||+++++++...     ...++|+||+. ++|.+++.....   .+..++.
T Consensus        57 iK~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~~~~~~iv~e~~~-~~L~~~l~~~~~~~~~~~~i~~  135 (364)
T 3qyz_A           57 IKKISPFEHQTYCQRTLREIKILLRFRHENIIGINDIIRAPTIEQMKDVYIVQDLME-TDLYKLLKTQHLSNDHICYFLY  135 (364)
T ss_dssp             EEEECCTTCHHHHHHHHHHHHHHHHCCCTTBCCCCEEECCSSTTTCCCEEEEEECCS-EEHHHHHHHCCCCHHHHHHHHH
T ss_pred             EEEeccccCcHHHHHHHHHHHHHHhcCCCCCccceeEEecCCccccceEEEEEcccC-cCHHHHHHhCCCCHHHHHHHHH
Confidence            35554433444567899999999999999999999999754     36899999997 699998876543   4678999


Q ss_pred             HHHHHhchhhcCCCCCceeccCCCCCeeecCCCCeEEeeccCceecCCCCcce-eecccccCCCccCccccccc-CCCcc
Q 044022           73 DIVNSLAYLHFGFPRPIVLRNFKTQNILFNEENVAKWFDFLLSISIPEGETHI-TTDRVIGTRGYSAPEYISIC-VLNEK  150 (241)
Q Consensus        73 ~i~~~l~~lh~~~~~~ivh~dl~~~nil~~~~~~~~l~df~~~~~~~~~~~~~-~~~~~~~~~~~~aPE~~~~~-~~~~~  150 (241)
                      |++.||.|||   +.+++||||||+||+++.++.++|+|||.+.......... ......||+.|+|||++.+. .++.+
T Consensus       136 qi~~aL~~LH---~~~ivH~Dikp~NIl~~~~~~~kl~Dfg~a~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~  212 (364)
T 3qyz_A          136 QILRGLKYIH---SANVLHRDLKPSNLLLNTTCDLKICDFGLARVADPDHDHTGFLTEYVATRWYRAPEIMLNSKGYTKS  212 (364)
T ss_dssp             HHHHHHHHHH---HTTEECCCCCGGGEEECTTCCEEECCCTTCEECCGGGCBCCTTCCCCSCGGGCCHHHHHTBCSCSTH
T ss_pred             HHHHHHHHHH---HCCeecCCCChHhEEECCCCCEEEEeCcceEecCCCCCccccccccccccCCCCCHHhcCCCCCCcc
Confidence            9999999999   8999999999999999999999999999998665332111 12334789999999987654 58999


Q ss_pred             hhhHHHHHHHHHHHhcCccccc
Q 044022          151 SNVFSFGAFLFELLAGRIHIWD  172 (241)
Q Consensus       151 ~Di~s~G~~~~~~~~g~~p~~~  172 (241)
                      +||||||+++|+|++|+.||..
T Consensus       213 ~DiwslG~il~ell~g~~pf~~  234 (364)
T 3qyz_A          213 IDIWSVGCILAEMLSNRPIFPG  234 (364)
T ss_dssp             HHHHHHHHHHHHHHHSSCSSCC
T ss_pred             hhHHHHHHHHHHHHHCCCCCCC
Confidence            9999999999999999999965


No 201
>2pml_X PFPK7, Ser/Thr protein kinase; phosphorylati transferase, transferase; HET: ANP; 2.60A {Plasmodium falciparum} PDB: 2pmn_X* 2pmo_X*
Probab=100.00  E-value=5.7e-38  Score=257.66  Aligned_cols=211  Identities=18%  Similarity=0.222  Sum_probs=159.9

Q ss_pred             HHHHHHHHHHHhcCCCcccceeeeeeeCCcceEEEEecCCCCHHHh------hcCC--C-c---hHHHHHHHHHHHhchh
Q 044022           14 GSCINNITYAAQMSHNHILKRIGCCLQTPIPILVFQSVEYGTLRDC------IFGA--P-L---PRLKIASDIVNSLAYL   81 (241)
Q Consensus        14 ~~~~~e~~~l~~l~h~~iv~~~~~~~~~~~~~lv~e~~~~~sL~~~------l~~~--~-~---~~~~~~~~i~~~l~~l   81 (241)
                      +.+.+|++++++++||||+++++++...+..++||||+++++|.++      +...  . .   .+..++.+++.||.||
T Consensus        88 ~~~~~E~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~~~~~~L~~~~~~~~~l~~~~~~~~~~~~~~~i~~qi~~~l~~l  167 (348)
T 2pml_X           88 DDFKNELQIITDIKNEYCLTCEGIITNYDEVYIIYEYMENDSILKFDEYFFVLDKNYTCFIPIQVIKCIIKSVLNSFSYI  167 (348)
T ss_dssp             HHHHHHHHHHTTCCCTTBCCCSEEEESSSEEEEEEECCTTCBSSEESSSEESSCSSSCCCCCHHHHHHHHHHHHHHHHHH
T ss_pred             HHHHHHHHHHHhCCCCCcceEEEEEeeCCeEEEEEeccCCCcHHHHHHHhhhhhhccccCCCHHHHHHHHHHHHHHHHHH
Confidence            8899999999999999999999999999999999999999999998      6542  1 1   4678999999999999


Q ss_pred             hcCCC-CCceeccCCCCCeeecCCCCeEEeeccCceecCCCCcceeecccccCCCccCccccccc-CCCc-chhhHHHHH
Q 044022           82 HFGFP-RPIVLRNFKTQNILFNEENVAKWFDFLLSISIPEGETHITTDRVIGTRGYSAPEYISIC-VLNE-KSNVFSFGA  158 (241)
Q Consensus        82 h~~~~-~~ivh~dl~~~nil~~~~~~~~l~df~~~~~~~~~~~~~~~~~~~~~~~~~aPE~~~~~-~~~~-~~Di~s~G~  158 (241)
                      |   + .+++|+||+|+||+++.++.++|+|||.+......    ......++..|+|||.+.+. .++. ++||||||+
T Consensus       168 H---~~~~i~H~dl~p~Nil~~~~~~~kl~dfg~~~~~~~~----~~~~~~~~~~y~aPE~~~~~~~~~~~~~Di~slG~  240 (348)
T 2pml_X          168 H---NEKNICHRDVKPSNILMDKNGRVKLSDFGESEYMVDK----KIKGSRGTYEFMPPEFFSNESSYNGAKVDIWSLGI  240 (348)
T ss_dssp             H---HTSCEECCCCCGGGEEECTTSCEEECCCTTCEECBTT----EECSSCSCGGGCCGGGGSSCCCEEHHHHHHHHHHH
T ss_pred             h---ccCCEeecCCChHhEEEcCCCcEEEeccccccccccc----cccCCCCCcCccCchhhcCCCCCCcchhhHHHHHH
Confidence            9   7 99999999999999999999999999999865443    22345689999999999877 5665 999999999


Q ss_pred             HHHHHHhcCcccccccccCCCcccchHHHHHHHhhhcccCCCCCCc--c----ccCCCchhHHHHHHHHHHHHHHhccCC
Q 044022          159 FLFELLAGRIHIWDLLKDTHDHGCFFNEYLKNYLEDKRFTGIPAPI--I----VQDIPCIEKEQQLHASAQLTLECVNNS  232 (241)
Q Consensus       159 ~~~~~~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~----~~~~~~~~~~~~~~~~~~l~~~cl~~~  232 (241)
                      ++|+|++|..||......        .+....... +.. ..+...  .    ............+..+.+++.+||+.|
T Consensus       241 il~~l~~g~~pf~~~~~~--------~~~~~~i~~-~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~~L~~d  310 (348)
T 2pml_X          241 CLYVMFYNVVPFSLKISL--------VELFNNIRT-KNI-EYPLDRNHFLYPLTNKKSTCSNNFLSNEDIDFLKLFLRKN  310 (348)
T ss_dssp             HHHHHHHSSCSSCCSSCS--------HHHHHHHTS-CCC-CCCCSSSSSTTTTCC--------CCCHHHHHHHHHHCCSS
T ss_pred             HHHHHHhCCCCCCCCCcH--------HHHHHHHhc-cCc-CCccchhhhhccccccccccchhhcCHHHHHHHHHHccCC
Confidence            999999999999652110        111222111 111 111000  0    000000000123367899999999999


Q ss_pred             CCCCCCCCC
Q 044022          233 PEDRPTMVD  241 (241)
Q Consensus       233 p~~Rpt~~e  241 (241)
                      |++|||++|
T Consensus       311 P~~Rps~~e  319 (348)
T 2pml_X          311 PAERITSED  319 (348)
T ss_dssp             GGGSCCHHH
T ss_pred             hhhCCCHHH
Confidence            999999853


No 202
>1vzo_A Ribosomal protein S6 kinase alpha 5; protein kinase, transferase, phosphorylation, serine/threonine protein kinase; 1.8A {Homo sapiens} SCOP: d.144.1.7
Probab=100.00  E-value=2.1e-38  Score=261.29  Aligned_cols=204  Identities=19%  Similarity=0.181  Sum_probs=156.8

Q ss_pred             ccHHHHHHHHHHHHhc-CCCcccceeeeeeeCCcceEEEEecCCCCHHHhhcCCC----chHHHHHHHHHHHhchhhcCC
Q 044022           11 HTYGSCINNITYAAQM-SHNHILKRIGCCLQTPIPILVFQSVEYGTLRDCIFGAP----LPRLKIASDIVNSLAYLHFGF   85 (241)
Q Consensus        11 ~~~~~~~~e~~~l~~l-~h~~iv~~~~~~~~~~~~~lv~e~~~~~sL~~~l~~~~----~~~~~~~~~i~~~l~~lh~~~   85 (241)
                      ...+.+.+|+++++++ .||||+++++++...+..++||||+++++|.+++....    .....++.|++.||.|||   
T Consensus       100 ~~~~~~~~E~~~l~~l~~h~~iv~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~qi~~aL~~LH---  176 (355)
T 1vzo_A          100 KTTEHTRTERQVLEHIRQSPFLVTLHYAFQTETKLHLILDYINGGELFTHLSQRERFTEHEVQIYVGEIVLALEHLH---  176 (355)
T ss_dssp             SSGGGCCCHHHHHHHHHTCTTBCCEEEEEEETTEEEEEECCCCSCBHHHHHHHHSCCCHHHHHHHHHHHHHHHHHHH---
T ss_pred             hHHHHHHHHHHHHHHccCCCceeEEEEEEeeCceEEEEeecCCCCCHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHH---
Confidence            3456778899999999 69999999999999999999999999999999986432    246778999999999999   


Q ss_pred             CCCceeccCCCCCeeecCCCCeEEeeccCceecCCCCcceeecccccCCCccCcccccc--cCCCcchhhHHHHHHHHHH
Q 044022           86 PRPIVLRNFKTQNILFNEENVAKWFDFLLSISIPEGETHITTDRVIGTRGYSAPEYISI--CVLNEKSNVFSFGAFLFEL  163 (241)
Q Consensus        86 ~~~ivh~dl~~~nil~~~~~~~~l~df~~~~~~~~~~~~~~~~~~~~~~~~~aPE~~~~--~~~~~~~Di~s~G~~~~~~  163 (241)
                      +.+++||||||+|||++.++.+||+|||++.......... .....||+.|+|||++.+  ..++.++||||||+++|+|
T Consensus       177 ~~~ivH~Dlkp~NIll~~~~~~kl~DfG~a~~~~~~~~~~-~~~~~gt~~y~aPE~~~~~~~~~~~~~DvwslG~il~el  255 (355)
T 1vzo_A          177 KLGIIYRDIKLENILLDSNGHVVLTDFGLSKEFVADETER-AYDFCGTIEYMAPDIVRGGDSGHDKAVDWWSLGVLMYEL  255 (355)
T ss_dssp             HTTCCCCCCCGGGEEECTTSCEEESCSSEEEECCGGGGGG-GCGGGSCCTTCCHHHHTTCC---CTHHHHHHHHHHHHHH
T ss_pred             HCCcccCCCCHHHEEECCCCcEEEeeCCCCeecccCCCCc-ccCcccCcCccChhhhcCCCCCCCchhhHHHHHHHHHHH
Confidence            8999999999999999999999999999997654332211 233568999999999985  3478899999999999999


Q ss_pred             HhcCcccccccccCCCcccchHHHHHHHhhhcccCCCCCCccccCCCchhHHHHHHHHHHHHHHhccCCCCCCCC
Q 044022          164 LAGRIHIWDLLKDTHDHGCFFNEYLKNYLEDKRFTGIPAPIIVQDIPCIEKEQQLHASAQLTLECVNNSPEDRPT  238 (241)
Q Consensus       164 ~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~cl~~~p~~Rpt  238 (241)
                      ++|+.||......     ..............       +....        ..+..+.+|+.+||..||++||+
T Consensus       256 l~g~~pf~~~~~~-----~~~~~~~~~~~~~~-------~~~~~--------~~~~~~~~li~~~L~~dP~~R~~  310 (355)
T 1vzo_A          256 LTGASPFTVDGEK-----NSQAEISRRILKSE-------PPYPQ--------EMSALAKDLIQRLLMKDPKKRLG  310 (355)
T ss_dssp             HHSSCTTSCTTSC-----CCHHHHHHHHHHCC-------CCCCT--------TSCHHHHHHHHHHTCSSGGGSTT
T ss_pred             HHCCCCCccCCcc-----chHHHHHHHHhccC-------CCCCc--------ccCHHHHHHHHHHhhhCHHHhcC
Confidence            9999999642111     11122222221111       01111        12256889999999999999993


No 203
>2fst_X Mitogen-activated protein kinase 14; active mutants, lipids, MAP kinase insertion, autophosphorylation, transferase; HET: BOG; 1.45A {Homo sapiens} PDB: 2fso_X* 2fsl_X* 2fsm_X* 2npq_A* 2bal_A* 2baj_A* 2bak_A* 2baq_A* 2qd9_A* 1ian_A* 2rg5_A* 2rg6_A* 3bv2_A* 3bv3_A* 3bx5_A* 3c5u_A* 3cg2_A* 3l8x_A* 3mvl_A* 3mvm_A* ...
Probab=100.00  E-value=2.5e-38  Score=261.83  Aligned_cols=163  Identities=21%  Similarity=0.290  Sum_probs=124.0

Q ss_pred             Cccccccc-ccccHHHHHHHHHHHHhcCCCcccceeeeeeeC------CcceEEEEecCCCCHHHhhcCCCc---hHHHH
Q 044022            1 MKFYGHEY-HRHTYGSCINNITYAAQMSHNHILKRIGCCLQT------PIPILVFQSVEYGTLRDCIFGAPL---PRLKI   70 (241)
Q Consensus         1 iK~~~~~~-~~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~~~------~~~~lv~e~~~~~sL~~~l~~~~~---~~~~~   70 (241)
                      ||.+.... ......++.+|++++++++||||+++++++...      ...++|+|++ +++|.+++.....   ....+
T Consensus        59 iK~~~~~~~~~~~~~~~~~E~~~l~~l~hpnIv~~~~~~~~~~~~~~~~~~~lv~e~~-~~~L~~~~~~~~l~~~~~~~i  137 (367)
T 2fst_X           59 VKKLSRPFQSIIHAKRTYRELRLLKHMKHENVIGLLDVFTPARSLEEFNDVYLVTHLM-GADLNNIVKCQKLTDDHVQFL  137 (367)
T ss_dssp             EEECSSTTSSHHHHHHHHHHHHHHHHCCCTTBCCCSEEECSCSSGGGCCCCEEEEECC-CEECC-----CCCCHHHHHHH
T ss_pred             EEEeCccccCHHHHHHHHHHHHHHHhCCCCCCCcEEEEEecCCccccCCeEEEEeccc-CCCHHHHHhcCCCCHHHHHHH
Confidence            35444332 223467788999999999999999999998754      5679999999 6899998876533   46789


Q ss_pred             HHHHHHHhchhhcCCCCCceeccCCCCCeeecCCCCeEEeeccCceecCCCCcceeecccccCCCccCcccccc-cCCCc
Q 044022           71 ASDIVNSLAYLHFGFPRPIVLRNFKTQNILFNEENVAKWFDFLLSISIPEGETHITTDRVIGTRGYSAPEYISI-CVLNE  149 (241)
Q Consensus        71 ~~~i~~~l~~lh~~~~~~ivh~dl~~~nil~~~~~~~~l~df~~~~~~~~~~~~~~~~~~~~~~~~~aPE~~~~-~~~~~  149 (241)
                      +.||+.||.|||   +.+++||||||+|||++.++.+||+|||++......     .....+|+.|+|||++.+ ..++.
T Consensus       138 ~~qi~~aL~~LH---~~givH~Dlkp~NIll~~~~~~kL~DFG~a~~~~~~-----~~~~~~t~~y~aPE~~~~~~~~~~  209 (367)
T 2fst_X          138 IYQILRGLKYIH---SADIIHRDLKPSNLAVNEDCELKILDFGLARHTADE-----MTGYVATRWYRAPEIMLNWMHYNQ  209 (367)
T ss_dssp             HHHHHHHHHHHH---HTTCCCCCCCGGGEEECTTCCEEECC--------------------CCCTTCCHHHHTTCCSCCT
T ss_pred             HHHHHHHHHHHH---HCCeeeCCCCHhhEEECCCCCEEEeecccccccccc-----CCCcCcCcCccChHHHcCCcCCCc
Confidence            999999999999   899999999999999999999999999999765432     133468999999999887 57899


Q ss_pred             chhhHHHHHHHHHHHhcCccccc
Q 044022          150 KSNVFSFGAFLFELLAGRIHIWD  172 (241)
Q Consensus       150 ~~Di~s~G~~~~~~~~g~~p~~~  172 (241)
                      ++|||||||++|+|++|+.||..
T Consensus       210 ~~DiwslG~il~ell~g~~pf~~  232 (367)
T 2fst_X          210 TVDIWSVGCIMAELLTGRTLFPG  232 (367)
T ss_dssp             THHHHHHHHHHHHHHHSSCSCCC
T ss_pred             hhhHHHHHHHHHHHHhCCCCCCC
Confidence            99999999999999999999954


No 204
>2b9h_A MAP kinase FUS3, mitogen-activated protein kinase FUS3; transferase; HET: ADP; 1.55A {Saccharomyces cerevisiae} PDB: 2b9i_A* 2b9j_A* 2f49_A 2fa2_A 2b9f_A* 2f9g_A*
Probab=100.00  E-value=6.6e-38  Score=257.79  Aligned_cols=168  Identities=20%  Similarity=0.182  Sum_probs=136.1

Q ss_pred             CcccccccccccHHHHHHHHHHHHhcCCCcccceeeeeeeC-----CcceEEEEecCCCCHHHhhcCCCc---hHHHHHH
Q 044022            1 MKFYGHEYHRHTYGSCINNITYAAQMSHNHILKRIGCCLQT-----PIPILVFQSVEYGTLRDCIFGAPL---PRLKIAS   72 (241)
Q Consensus         1 iK~~~~~~~~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~~~-----~~~~lv~e~~~~~sL~~~l~~~~~---~~~~~~~   72 (241)
                      ||.+..........++.+|++++++++||||+++++++...     ...++|+||+. ++|.+++.....   ....++.
T Consensus        41 iK~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~~~~~~lv~e~~~-~~L~~~~~~~~~~~~~~~~~~~  119 (353)
T 2b9h_A           41 IKKIEPFDKPLFALRTLREIKILKHFKHENIITIFNIQRPDSFENFNEVYIIQELMQ-TDLHRVISTQMLSDDHIQYFIY  119 (353)
T ss_dssp             EEEECCCSSHHHHHHHHHHHHHHHHCCCTTBCCEEEECCCSCSTTCCCEEEEECCCS-EEHHHHHHHCCCCHHHHHHHHH
T ss_pred             EEeecccccchHHHHHHHHHHHHHhCcCCCcCCeeeeecccccCccceEEEEEeccC-ccHHHHHhhcCCCHHHHHHHHH
Confidence            35554333334566788999999999999999999988754     57899999997 699998876433   4678999


Q ss_pred             HHHHHhchhhcCCCCCceeccCCCCCeeecCCCCeEEeeccCceecCCCCcce--------eecccccCCCccCcccccc
Q 044022           73 DIVNSLAYLHFGFPRPIVLRNFKTQNILFNEENVAKWFDFLLSISIPEGETHI--------TTDRVIGTRGYSAPEYISI  144 (241)
Q Consensus        73 ~i~~~l~~lh~~~~~~ivh~dl~~~nil~~~~~~~~l~df~~~~~~~~~~~~~--------~~~~~~~~~~~~aPE~~~~  144 (241)
                      +++.||.|||   +.+++||||||+||+++.++.++|+|||.+..........        ......||+.|+|||++..
T Consensus       120 qi~~~L~~LH---~~~ivH~Dlkp~Nil~~~~~~~kl~Dfg~a~~~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~  196 (353)
T 2b9h_A          120 QTLRAVKVLH---GSNVIHRDLKPSNLLINSNCDLKVCDFGLARIIDESAADNSEPTGQQSGMVEFVATRWYRAPEVMLT  196 (353)
T ss_dssp             HHHHHHHHHH---HTTEECSCCCGGGEEECTTCCEEECCCTTCEECC----------------CCCCCCGGGCCHHHHHS
T ss_pred             HHHHHHHHHH---HCCeecCCCCHHHeEEcCCCcEEEEecccccccccccccccCccccccchhhccccccccCCeeecc
Confidence            9999999999   8999999999999999999999999999998765322111        1123467899999998764


Q ss_pred             -cCCCcchhhHHHHHHHHHHHhcCccccc
Q 044022          145 -CVLNEKSNVFSFGAFLFELLAGRIHIWD  172 (241)
Q Consensus       145 -~~~~~~~Di~s~G~~~~~~~~g~~p~~~  172 (241)
                       ..++.++||||||+++|+|++|+.||..
T Consensus       197 ~~~~~~~~Di~slG~il~~l~~g~~pf~~  225 (353)
T 2b9h_A          197 SAKYSRAMDVWSCGCILAELFLRRPIFPG  225 (353)
T ss_dssp             CCCCCHHHHHHHHHHHHHHHHHSSCSCCC
T ss_pred             CCCccchhhHHHHHHHHHHHHhCCCCCCC
Confidence             6788999999999999999999999965


No 205
>3mi9_A Cell division protein kinase 9; P-TEFB, HIV-1, protein binding; HET: TPO; 2.10A {Homo sapiens} PDB: 3mia_A* 4ec9_A* 4ec8_A* 3blh_A* 3blq_A* 3blr_A* 3lq5_A* 3my1_A* 3tn8_A* 3tnh_A* 3tni_A* 4bch_A* 4bci_A* 4bcj_A* 4bcf_A*
Probab=100.00  E-value=3e-37  Score=253.87  Aligned_cols=158  Identities=18%  Similarity=0.228  Sum_probs=131.9

Q ss_pred             ccHHHHHHHHHHHHhcCCCcccceeeeeee--------CCcceEEEEecCCCCHHHhhcCCC-----chHHHHHHHHHHH
Q 044022           11 HTYGSCINNITYAAQMSHNHILKRIGCCLQ--------TPIPILVFQSVEYGTLRDCIFGAP-----LPRLKIASDIVNS   77 (241)
Q Consensus        11 ~~~~~~~~e~~~l~~l~h~~iv~~~~~~~~--------~~~~~lv~e~~~~~sL~~~l~~~~-----~~~~~~~~~i~~~   77 (241)
                      .....+.+|++++++++||||+++++++..        .+..++||||+. ++|.+.+....     ..+..++.|++.|
T Consensus        58 ~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~~~~~~~~~lv~e~~~-~~l~~~l~~~~~~~~~~~~~~i~~qi~~~  136 (351)
T 3mi9_A           58 GFPITALREIKILQLLKHENVVNLIEICRTKASPYNRCKGSIYLVFDFCE-HDLAGLLSNVLVKFTLSEIKRVMQMLLNG  136 (351)
T ss_dssp             SSCHHHHHHHHHHHHCCCTTBCCEEEEEEEC--------CEEEEEEECCS-EEHHHHHHCTTSCCCHHHHHHHHHHHHHH
T ss_pred             cchHHHHHHHHHHHhccCCCcccHhheeeccccccccCCceEEEEEeccC-CCHHHHHhhccCCCCHHHHHHHHHHHHHH
Confidence            345678899999999999999999999987        346899999997 57777765432     1467899999999


Q ss_pred             hchhhcCCCCCceeccCCCCCeeecCCCCeEEeeccCceecCCCCc--ceeecccccCCCccCcccccc-cCCCcchhhH
Q 044022           78 LAYLHFGFPRPIVLRNFKTQNILFNEENVAKWFDFLLSISIPEGET--HITTDRVIGTRGYSAPEYISI-CVLNEKSNVF  154 (241)
Q Consensus        78 l~~lh~~~~~~ivh~dl~~~nil~~~~~~~~l~df~~~~~~~~~~~--~~~~~~~~~~~~~~aPE~~~~-~~~~~~~Di~  154 (241)
                      |.|||   +.+++||||||+|||++.++.+||+|||.+........  ........+|+.|+|||++.+ ..++.++|||
T Consensus       137 l~~LH---~~~ivH~Dlkp~NIl~~~~~~~kl~Dfg~a~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~Diw  213 (351)
T 3mi9_A          137 LYYIH---RNKILHRDMKAANVLITRDGVLKLADFGLARAFSLAKNSQPNRYTNRVVTLWYRPPELLLGERDYGPPIDLW  213 (351)
T ss_dssp             HHHHH---HTTEECCCCSGGGEEECTTSCEEECCCTTCEECCCCSSSSCCCCCSSCSCGGGCCHHHHTTCCSCCTHHHHH
T ss_pred             HHHHH---HCCeeCCCCCHHHEEEcCCCCEEEccchhcccccccccccccccCCcccccCccCchhhcCCCCCCcHhHHH
Confidence            99999   89999999999999999999999999999986643211  112234568999999999876 4579999999


Q ss_pred             HHHHHHHHHHhcCccccc
Q 044022          155 SFGAFLFELLAGRIHIWD  172 (241)
Q Consensus       155 s~G~~~~~~~~g~~p~~~  172 (241)
                      |||+++|+|++|..||..
T Consensus       214 slG~il~ell~g~~pf~~  231 (351)
T 3mi9_A          214 GAGCIMAEMWTRSPIMQG  231 (351)
T ss_dssp             HHHHHHHHHHHSSCSCCC
T ss_pred             HHHHHHHHHHhCCCCCCC
Confidence            999999999999999965


No 206
>4hgt_A Casein kinase I isoform delta; CK1D, inhibitor, transferase-transferase inhibitor C; HET: 15G; 1.80A {Homo sapiens} PDB: 3uys_A* 3uyt_A* 3uzp_A* 4hnf_A* 1cki_A 1ckj_A 4hni_A* 4hok_A
Probab=100.00  E-value=1.6e-37  Score=249.29  Aligned_cols=209  Identities=16%  Similarity=0.205  Sum_probs=157.1

Q ss_pred             HHHHHHHHHHHHhcCCCcccceeeee-eeCCcceEEEEecCCCCHHHhhcCC--Cc---hHHHHHHHHHHHhchhhcCCC
Q 044022           13 YGSCINNITYAAQMSHNHILKRIGCC-LQTPIPILVFQSVEYGTLRDCIFGA--PL---PRLKIASDIVNSLAYLHFGFP   86 (241)
Q Consensus        13 ~~~~~~e~~~l~~l~h~~iv~~~~~~-~~~~~~~lv~e~~~~~sL~~~l~~~--~~---~~~~~~~~i~~~l~~lh~~~~   86 (241)
                      .+++.+|++++++++|++++..+..+ ...+..++||||+ +++|.+++...  ..   ....++.+++.||.|||   +
T Consensus        48 ~~~~~~e~~~l~~l~~~~~i~~~~~~~~~~~~~~lv~e~~-~~~L~~~~~~~~~~~~~~~~~~i~~qi~~~l~~LH---~  123 (296)
T 4hgt_A           48 HPQLHIESKIYKMMQGGVGIPTIRWCGAEGDYNVMVMELL-GPSLEDLFNFCSRKFSLKTVLLLADQMISRIEYIH---S  123 (296)
T ss_dssp             CCCHHHHHHHHHHHTTSTTCCCEEEEEEETTEEEEEEECC-CCBHHHHHHHTTSCCCHHHHHHHHHHHHHHHHHHH---H
T ss_pred             chHHHHHHHHHHHhcCCCCCCeeeeecCCCCceEEEEEcc-CCCHHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHH---H
Confidence            34688999999999998877766655 5667789999999 89999998632  22   56789999999999999   8


Q ss_pred             CCceeccCCCCCeee---cCCCCeEEeeccCceecCCCCcc-----eeecccccCCCccCcccccccCCCcchhhHHHHH
Q 044022           87 RPIVLRNFKTQNILF---NEENVAKWFDFLLSISIPEGETH-----ITTDRVIGTRGYSAPEYISICVLNEKSNVFSFGA  158 (241)
Q Consensus        87 ~~ivh~dl~~~nil~---~~~~~~~l~df~~~~~~~~~~~~-----~~~~~~~~~~~~~aPE~~~~~~~~~~~Di~s~G~  158 (241)
                      .+++||||||+||++   +.++.+||+|||.+.........     .......+++.|+|||.+.+..++.++||||||+
T Consensus       124 ~~ivH~Dlkp~NIl~~~~~~~~~~kL~Dfg~a~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Di~slG~  203 (296)
T 4hgt_A          124 KNFIHRDVKPDNFLMGLGKKGNLVYIIDFGLAKKYRDARTHQHIPYRENKNLTGTARYASINTHLGIEQSRRDDLESLGY  203 (296)
T ss_dssp             TTEECSCCSGGGEEECCGGGTTCEEECCCTTCEECBCTTTCCBCCCCCSCCCCSCGGGCCHHHHTTCCCCHHHHHHHHHH
T ss_pred             CCeecCCCCHHHeeeeccCCCCeEEEecCccceeccCcccCccCCCCcccccCCCccccchHHhcCCCCCchhHHHHHHH
Confidence            999999999999999   78899999999999876543221     1223457899999999999989999999999999


Q ss_pred             HHHHHHhcCcccccccccCCCcccchHHHHHHHhhhcccCCCCCCccccCCCchhHHHHHHHHHHHHHHhccCCCCCCCC
Q 044022          159 FLFELLAGRIHIWDLLKDTHDHGCFFNEYLKNYLEDKRFTGIPAPIIVQDIPCIEKEQQLHASAQLTLECVNNSPEDRPT  238 (241)
Q Consensus       159 ~~~~~~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~cl~~~p~~Rpt  238 (241)
                      ++|+|++|+.||........  ............. .     +.+....        ..+..+.+++.+||+.||++|||
T Consensus       204 il~~l~~g~~pf~~~~~~~~--~~~~~~~~~~~~~-~-----~~~~~~~--------~~~~~l~~li~~~l~~~p~~Rpt  267 (296)
T 4hgt_A          204 VLMYFNLGSLPWQGLKAATK--RQKYERISEKKMS-T-----PIEVLCK--------GYPSEFATYLNFCRSLRFDDKPD  267 (296)
T ss_dssp             HHHHHHHSSCTTSSCCCSSS--SSHHHHHHHHHHH-S-----CHHHHTT--------TSCHHHHHHHHHHHTSCTTCCCC
T ss_pred             HHHHHhcCCCCCcccchhhh--hhhhhhhhccccc-c-----hhhhhhc--------cCCHHHHHHHHHHHhcCCCCCCC
Confidence            99999999999965322211  1111111111100 0     0000001        11257899999999999999999


Q ss_pred             CCC
Q 044022          239 MVD  241 (241)
Q Consensus       239 ~~e  241 (241)
                      ++|
T Consensus       268 ~~~  270 (296)
T 4hgt_A          268 YSY  270 (296)
T ss_dssp             HHH
T ss_pred             HHH
Confidence            753


No 207
>2wtk_C Serine/threonine-protein kinase 11; transferase-metal-binding protein complex, transferase metal protein complex, nucleus; HET: ANP; 2.65A {Homo sapiens}
Probab=100.00  E-value=1.6e-37  Score=250.46  Aligned_cols=203  Identities=14%  Similarity=0.197  Sum_probs=155.1

Q ss_pred             ccHHHHHHHHHHHHhcCCCcccceeeeee--eCCcceEEEEecCCCCHHHhhcCC---Cc---hHHHHHHHHHHHhchhh
Q 044022           11 HTYGSCINNITYAAQMSHNHILKRIGCCL--QTPIPILVFQSVEYGTLRDCIFGA---PL---PRLKIASDIVNSLAYLH   82 (241)
Q Consensus        11 ~~~~~~~~e~~~l~~l~h~~iv~~~~~~~--~~~~~~lv~e~~~~~sL~~~l~~~---~~---~~~~~~~~i~~~l~~lh   82 (241)
                      .....+.+|++++++++||||+++++++.  ..+..++||||+.++ |.+++...   ..   ....++.+++.||.|||
T Consensus        48 ~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~~~~~~lv~e~~~~~-l~~~~~~~~~~~~~~~~~~~~~~qi~~al~~LH  126 (305)
T 2wtk_C           48 NGEANVKKEIQLLRRLRHKNVIQLVDVLYNEEKQKMYMVMEYCVCG-MQEMLDSVPEKRFPVCQAHGYFCQLIDGLEYLH  126 (305)
T ss_dssp             THHHHHHHHHHHHTTCCCTTBCCEEEEEECC---CEEEEEECCSEE-HHHHHHHSTTCSCCHHHHHHHHHHHHHHHHHHH
T ss_pred             hhHHHHHHHHHHHHhcCCCCeeEEEEEEEcCCCCeEEEEehhccCC-HHHHHHhCcccccCHHHHHHHHHHHHHHHHHHH
Confidence            34677999999999999999999999984  455789999999865 76665432   11   46789999999999999


Q ss_pred             cCCCCCceeccCCCCCeeecCCCCeEEeeccCceecCCCCcceeecccccCCCccCcccccccC--CCcchhhHHHHHHH
Q 044022           83 FGFPRPIVLRNFKTQNILFNEENVAKWFDFLLSISIPEGETHITTDRVIGTRGYSAPEYISICV--LNEKSNVFSFGAFL  160 (241)
Q Consensus        83 ~~~~~~ivh~dl~~~nil~~~~~~~~l~df~~~~~~~~~~~~~~~~~~~~~~~~~aPE~~~~~~--~~~~~Di~s~G~~~  160 (241)
                         +.+++|+||||+||+++.++.++|+|||.+................+++.|+|||++.+..  .+.++||||||+++
T Consensus       127 ---~~~i~H~dlkp~NIl~~~~~~~kl~dfg~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~~Di~slG~il  203 (305)
T 2wtk_C          127 ---SQGIVHKDIKPGNLLLTTGGTLKISALGVAEALHPFAADDTCRTSQGSPAFQPPEIANGLDTFSGFKVDIWSAGVTL  203 (305)
T ss_dssp             ---HTTEECSCCSGGGEEECTTCCEEECCCTTCEECCTTCSSCEECCCCSCGGGCCHHHHTCCSCEESHHHHHHHHHHHH
T ss_pred             ---HCCeeecCCCcccEEEcCCCcEEeeccccccccCccccccccccCCCCCCCcChhhccCcccCCcchhhHHHHHHHH
Confidence               8999999999999999999999999999998765433333334556899999999987643  37799999999999


Q ss_pred             HHHHhcCcccccccccCCCcccchHHHHHHHhhhcccCCCCCCccccCCCchhHHHHHHHHHHHHHHhccCCCCCCCCCC
Q 044022          161 FELLAGRIHIWDLLKDTHDHGCFFNEYLKNYLEDKRFTGIPAPIIVQDIPCIEKEQQLHASAQLTLECVNNSPEDRPTMV  240 (241)
Q Consensus       161 ~~~~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~cl~~~p~~Rpt~~  240 (241)
                      |+|++|..||...         ...+...... ....      .+...        .+..+.+++.+||+.||++|||++
T Consensus       204 ~~l~~g~~p~~~~---------~~~~~~~~i~-~~~~------~~~~~--------~~~~l~~li~~~l~~dp~~Rps~~  259 (305)
T 2wtk_C          204 YNITTGLYPFEGD---------NIYKLFENIG-KGSY------AIPGD--------CGPPLSDLLKGMLEYEPAKRFSIR  259 (305)
T ss_dssp             HHHHHSSCSCCCS---------SHHHHHHHHH-HCCC------CCCSS--------SCHHHHHHHHHHTCSSTTTSCCHH
T ss_pred             HHHHhCCCCCCCc---------hHHHHHHHHh-cCCC------CCCCc--------cCHHHHHHHHHHccCChhhCCCHH
Confidence            9999999999641         1122222221 1111      11111        225788999999999999999975


Q ss_pred             C
Q 044022          241 D  241 (241)
Q Consensus       241 e  241 (241)
                      |
T Consensus       260 ~  260 (305)
T 2wtk_C          260 Q  260 (305)
T ss_dssp             H
T ss_pred             H
Confidence            3


No 208
>2jii_A Serine/threonine-protein kinase VRK3 molecule: VA related kinase 3; transferase, pseudo kinase domain, vaccinia related kinase, ATP-binding; 2.00A {Homo sapiens}
Probab=100.00  E-value=3.5e-38  Score=259.59  Aligned_cols=211  Identities=14%  Similarity=0.177  Sum_probs=157.1

Q ss_pred             HHHHHHHHHHHhcCCCcccc---------------eeeeeee-CCcceEEEEecCCCCHHHhhcCC---C---chHHHHH
Q 044022           14 GSCINNITYAAQMSHNHILK---------------RIGCCLQ-TPIPILVFQSVEYGTLRDCIFGA---P---LPRLKIA   71 (241)
Q Consensus        14 ~~~~~e~~~l~~l~h~~iv~---------------~~~~~~~-~~~~~lv~e~~~~~sL~~~l~~~---~---~~~~~~~   71 (241)
                      +.+.+|++++++++||||++               +++++.. .+..++||||+ +++|.+++...   .   ..+..++
T Consensus        87 ~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~i~~~~~~~~~~~~~~~lv~e~~-~~~L~~~l~~~~~~~l~~~~~~~i~  165 (352)
T 2jii_A           87 GRLFNEQNFFQRAAKPLQVNKWKKLYSTPLLAIPTCMGFGVHQDKYRFLVLPSL-GRSLQSALDVSPKHVLSERSVLQVA  165 (352)
T ss_dssp             STHHHHHHHHHHHCCHHHHHHHHHHTTCTTCSCCCCCEEEEETTTEEEEEEECC-CEEHHHHHHHSGGGCCCHHHHHHHH
T ss_pred             chHHHHHHHHHHhcccchhhhhhhhccCCccCccchhhccccCCcEEEEEecCC-CcCHHHHHHhCCcCCCCHHHHHHHH
Confidence            56889999999999999998               5666665 67889999999 89999998754   1   1468899


Q ss_pred             HHHHHHhchhhcCCCCCceeccCCCCCeeecCCC--CeEEeeccCceecCCCCcc-----eeecccccCCCccCcccccc
Q 044022           72 SDIVNSLAYLHFGFPRPIVLRNFKTQNILFNEEN--VAKWFDFLLSISIPEGETH-----ITTDRVIGTRGYSAPEYISI  144 (241)
Q Consensus        72 ~~i~~~l~~lh~~~~~~ivh~dl~~~nil~~~~~--~~~l~df~~~~~~~~~~~~-----~~~~~~~~~~~~~aPE~~~~  144 (241)
                      .|++.||.|||   +.+++||||||+||+++.++  .++|+|||++.........     .......|++.|+|||++.+
T Consensus       166 ~qi~~~L~~LH---~~~ivH~Dikp~NIl~~~~~~~~~kl~Dfg~a~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~  242 (352)
T 2jii_A          166 CRLLDALEFLH---ENEYVHGNVTAENIFVDPEDQSQVTLAGYGFAFRYCPSGKHVAYVEGSRSPHEGDLEFISMDLHKG  242 (352)
T ss_dssp             HHHHHHHHHHH---HTTCBCSCCCGGGEEEETTEEEEEEECCGGGCBCSSGGGCCCCCCTTSSCTTCSCTTTCCHHHHTT
T ss_pred             HHHHHHHHHHH---hCCccCCCCCHHHEEEcCCCCceEEEecCcceeeccCCCccccccccccccccCCccccCHHHHcc
Confidence            99999999999   89999999999999999998  9999999999765432211     11123468999999999998


Q ss_pred             cCCCcchhhHHHHHHHHHHHhcCcccccccccCCCcccchHHHHHHHhhhcccCCCCCCccccCCCchhHHHHHHHHHHH
Q 044022          145 CVLNEKSNVFSFGAFLFELLAGRIHIWDLLKDTHDHGCFFNEYLKNYLEDKRFTGIPAPIIVQDIPCIEKEQQLHASAQL  224 (241)
Q Consensus       145 ~~~~~~~Di~s~G~~~~~~~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l  224 (241)
                      ..++.++||||||+++|+|++|+.||.......    .............  ...........       ...+..+.++
T Consensus       243 ~~~~~~~Di~slG~il~el~~g~~pf~~~~~~~----~~~~~~~~~~~~~--~~~~~~~~~~~-------~~~~~~l~~l  309 (352)
T 2jii_A          243 CGPSRRSDLQSLGYCMLKWLYGFLPWTNCLPNT----EDIMKQKQKFVDK--PGPFVGPCGHW-------IRPSETLQKY  309 (352)
T ss_dssp             CCCCHHHHHHHHHHHHHHHHHSCCTTGGGTTCH----HHHHHHHHHHHHS--CCCEECTTSCE-------ECCCHHHHHH
T ss_pred             CCCCchhhHHHHHHHHHHHHhCCCCcccCCcCH----HHHHHHHHhccCC--hhhhhhhcccc-------CCCcHHHHHH
Confidence            899999999999999999999999996532110    0111111111111  11111100000       0112678999


Q ss_pred             HHHhccCCCCCCCCCCC
Q 044022          225 TLECVNNSPEDRPTMVD  241 (241)
Q Consensus       225 ~~~cl~~~p~~Rpt~~e  241 (241)
                      +.+||+.||++|||++|
T Consensus       310 i~~~l~~dp~~Rps~~~  326 (352)
T 2jii_A          310 LKVVMALTYEEKPPYAM  326 (352)
T ss_dssp             HHHHHTCCTTCCCCHHH
T ss_pred             HHHHHhCChhhCCCHHH
Confidence            99999999999999753


No 209
>3uzp_A CKI-delta, CKID, casein kinase I isoform delta; CK1D, inhibitor, PF670462, transferase-transferase I complex; HET: 0CK; 1.94A {Homo sapiens} PDB: 3uys_A* 3uyt_A* 1cki_A 1ckj_A
Probab=100.00  E-value=2.4e-37  Score=248.41  Aligned_cols=209  Identities=16%  Similarity=0.193  Sum_probs=156.7

Q ss_pred             HHHHHHHHHHHHhcCCCcccceeeee-eeCCcceEEEEecCCCCHHHhhcCC--Cc---hHHHHHHHHHHHhchhhcCCC
Q 044022           13 YGSCINNITYAAQMSHNHILKRIGCC-LQTPIPILVFQSVEYGTLRDCIFGA--PL---PRLKIASDIVNSLAYLHFGFP   86 (241)
Q Consensus        13 ~~~~~~e~~~l~~l~h~~iv~~~~~~-~~~~~~~lv~e~~~~~sL~~~l~~~--~~---~~~~~~~~i~~~l~~lh~~~~   86 (241)
                      .+++.+|+.++++++|++++..+..+ ...+..++||||+ +++|.+++...  ..   ....++.|++.||.|||   +
T Consensus        48 ~~~~~~e~~~l~~l~~~~~i~~~~~~~~~~~~~~lv~e~~-~~~L~~~~~~~~~~~~~~~~~~i~~qi~~~l~~lH---~  123 (296)
T 3uzp_A           48 HPQLHIESKIYKMMQGGVGIPTIRWCGAEGDYNVMVMELL-GPSLEDLFNFCSRKFSLKTVLLLADQMISRIEYIH---S  123 (296)
T ss_dssp             CCHHHHHHHHHHHHTTSTTCCCEEEEEEETTEEEEEEECC-CCBHHHHHHHTTTCCCHHHHHHHHHHHHHHHHHHH---H
T ss_pred             hhHHHHHHHHHHHhhcCCCCCccccccCCCCceEEEEEec-CCCHHHHHHhhccCCCHHHHHHHHHHHHHHHHHHH---h
Confidence            45689999999999998877666655 5566789999999 89999998632  22   46789999999999999   8


Q ss_pred             CCceeccCCCCCeee---cCCCCeEEeeccCceecCCCCcce-----eecccccCCCccCcccccccCCCcchhhHHHHH
Q 044022           87 RPIVLRNFKTQNILF---NEENVAKWFDFLLSISIPEGETHI-----TTDRVIGTRGYSAPEYISICVLNEKSNVFSFGA  158 (241)
Q Consensus        87 ~~ivh~dl~~~nil~---~~~~~~~l~df~~~~~~~~~~~~~-----~~~~~~~~~~~~aPE~~~~~~~~~~~Di~s~G~  158 (241)
                      ++++||||||+||++   +.++.+||+|||.+..........     ......|++.|+|||.+.+..++.++||||||+
T Consensus       124 ~~ivH~dlkp~NIl~~~~~~~~~~kl~Dfg~~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Di~slG~  203 (296)
T 3uzp_A          124 KNFIHRDVKPDNFLMGLGKKGNLVYIIDFGLAKKYRDARTHQHIPYRENKNLTGTARYASINTHLGIEQSRRDDLESLGY  203 (296)
T ss_dssp             TTEECSCCCGGGEEECCGGGTTCEEECCCTTCEECBCTTTCCBCCCCCSCCCCSCTTTCCHHHHTTCCCCHHHHHHHHHH
T ss_pred             CCeeeCCCCHHHeEEecCCCCCeEEEeeCCCcccccccccccccccccccccccccccCChhhhcCCCCCcchhhHHHHH
Confidence            999999999999999   488999999999998765433211     123456899999999999989999999999999


Q ss_pred             HHHHHHhcCcccccccccCCCcccchHHHHHHHhhhcccCCCCCCccccCCCchhHHHHHHHHHHHHHHhccCCCCCCCC
Q 044022          159 FLFELLAGRIHIWDLLKDTHDHGCFFNEYLKNYLEDKRFTGIPAPIIVQDIPCIEKEQQLHASAQLTLECVNNSPEDRPT  238 (241)
Q Consensus       159 ~~~~~~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~cl~~~p~~Rpt  238 (241)
                      ++|+|++|+.||.......  ................      .+....        ..++.+.+++.+||+.||++|||
T Consensus       204 il~~l~~g~~pf~~~~~~~--~~~~~~~~~~~~~~~~------~~~~~~--------~~~~~l~~li~~~l~~dp~~Rps  267 (296)
T 3uzp_A          204 VLMYFNLGSLPWQGLKAAT--KRQKYERISEKKMSTP------IEVLCK--------GYPSEFATYLNFCRSLRFDDKPD  267 (296)
T ss_dssp             HHHHHHHSSCTTSSCCCSS--SSSHHHHHHHHHHHSC------HHHHTT--------TSCHHHHHHHHHHHTSCTTCCCC
T ss_pred             HHHHHHhCCCCCCCcCchh--hhhhhhhhcccccCCc------hHHHHh--------hCCHHHHHHHHHHHhcCcCcCCC
Confidence            9999999999996532211  1111111111111000      000111        12257899999999999999999


Q ss_pred             CCC
Q 044022          239 MVD  241 (241)
Q Consensus       239 ~~e  241 (241)
                      ++|
T Consensus       268 ~~~  270 (296)
T 3uzp_A          268 YSY  270 (296)
T ss_dssp             HHH
T ss_pred             HHH
Confidence            753


No 210
>1phk_A Phosphorylase kinase; glycogen metabolism, transferase, serine/threonine-protein, ATP-binding, calmodulin-binding; HET: ATP; 2.20A {Oryctolagus cuniculus} SCOP: d.144.1.7 PDB: 1ql6_A* 2phk_A*
Probab=100.00  E-value=1.4e-37  Score=250.05  Aligned_cols=204  Identities=23%  Similarity=0.330  Sum_probs=160.3

Q ss_pred             cHHHHHHHHHHHHhcC-CCcccceeeeeeeCCcceEEEEecCCCCHHHhhcCCC----chHHHHHHHHHHHhchhhcCCC
Q 044022           12 TYGSCINNITYAAQMS-HNHILKRIGCCLQTPIPILVFQSVEYGTLRDCIFGAP----LPRLKIASDIVNSLAYLHFGFP   86 (241)
Q Consensus        12 ~~~~~~~e~~~l~~l~-h~~iv~~~~~~~~~~~~~lv~e~~~~~sL~~~l~~~~----~~~~~~~~~i~~~l~~lh~~~~   86 (241)
                      ..+.+.+|++++++++ ||||+++++++...+..++||||+++++|.+++....    .....++.+++.||.|||   +
T Consensus        66 ~~~~~~~e~~~l~~l~~h~~i~~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~qi~~~l~~lH---~  142 (298)
T 1phk_A           66 LREATLKEVDILRKVSGHPNIIQLKDTYETNTFFFLVFDLMKKGELFDYLTEKVTLSEKETRKIMRALLEVICALH---K  142 (298)
T ss_dssp             HHHHHHHHHHHHHHHTTCTTBCCEEEEEECSSEEEEEEECCTTCBHHHHHHHHSSCCHHHHHHHHHHHHHHHHHHH---H
T ss_pred             HHHHHHHHHHHHHHhcCCCCEeeeeeeeccCCeEEEEEeccCCCcHHHHHhccCCCCHHHHHHHHHHHHHHHHHHH---H
Confidence            3567889999999995 9999999999999999999999999999999986532    256789999999999999   8


Q ss_pred             CCceeccCCCCCeeecCCCCeEEeeccCceecCCCCcceeecccccCCCccCccccc------ccCCCcchhhHHHHHHH
Q 044022           87 RPIVLRNFKTQNILFNEENVAKWFDFLLSISIPEGETHITTDRVIGTRGYSAPEYIS------ICVLNEKSNVFSFGAFL  160 (241)
Q Consensus        87 ~~ivh~dl~~~nil~~~~~~~~l~df~~~~~~~~~~~~~~~~~~~~~~~~~aPE~~~------~~~~~~~~Di~s~G~~~  160 (241)
                      .+++|+||+|+||+++.++.++|+|||.+.........   ....+++.|+|||++.      ...++.++||||||+++
T Consensus       143 ~~i~H~dl~p~Nil~~~~~~~kl~dfg~~~~~~~~~~~---~~~~~~~~y~aPE~~~~~~~~~~~~~~~~~Di~slG~~l  219 (298)
T 1phk_A          143 LNIVHRDLKPENILLDDDMNIKLTDFGFSCQLDPGEKL---REVCGTPSYLAPEIIECSMNDNHPGYGKEVDMWSTGVIM  219 (298)
T ss_dssp             TTEECSCCSGGGEEECTTCCEEECCCTTCEECCTTCCB---CCCCSCGGGCCHHHHHHHHCTTSCCBCTHHHHHHHHHHH
T ss_pred             CCcccCCCCcceEEEcCCCcEEEecccchhhcCCCccc---ccccCCccccCHHHhccccccccccCCcccccHhHHHHH
Confidence            99999999999999999999999999999876543321   2346889999999885      34678899999999999


Q ss_pred             HHHHhcCcccccccccCCCcccchHHHHHHHhhhcccCCCCCCccccCCCchhHHHHHHHHHHHHHHhccCCCCCCCCCC
Q 044022          161 FELLAGRIHIWDLLKDTHDHGCFFNEYLKNYLEDKRFTGIPAPIIVQDIPCIEKEQQLHASAQLTLECVNNSPEDRPTMV  240 (241)
Q Consensus       161 ~~~~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~cl~~~p~~Rpt~~  240 (241)
                      |+|++|..||....         ..+......... .. ...+..         ...+..+.+++.+||+.||++|||++
T Consensus       220 ~~l~~g~~p~~~~~---------~~~~~~~~~~~~-~~-~~~~~~---------~~~~~~l~~li~~~l~~dp~~Rps~~  279 (298)
T 1phk_A          220 YTLLAGSPPFWHRK---------QMLMLRMIMSGN-YQ-FGSPEW---------DDYSDTVKDLVSRFLVVQPQKRYTAE  279 (298)
T ss_dssp             HHHHHSSCSSCCSS---------HHHHHHHHHHTC-CC-CCTTTG---------GGSCHHHHHHHHHHCCSSGGGSCCHH
T ss_pred             HHHHHCCCCCcCcc---------HHHHHHHHhcCC-cc-cCcccc---------cccCHHHHHHHHHHccCCcccCCCHH
Confidence            99999999995421         111222221111 11 111110         12336789999999999999999975


Q ss_pred             C
Q 044022          241 D  241 (241)
Q Consensus       241 e  241 (241)
                      |
T Consensus       280 ~  280 (298)
T 1phk_A          280 E  280 (298)
T ss_dssp             H
T ss_pred             H
Confidence            3


No 211
>2j7t_A Serine/threonine-protein kinase 10; transferase, ATP-binding, cell cycle progression, phosphorylation, disease mutation, nucleotide- binding; HET: 274; 2.0A {Homo sapiens} PDB: 4aot_A* 3zz2_A* 2j51_A* 2jfl_A* 2jfm_A* 2uv2_A*
Probab=100.00  E-value=3.2e-38  Score=254.29  Aligned_cols=205  Identities=19%  Similarity=0.220  Sum_probs=155.7

Q ss_pred             ccHHHHHHHHHHHHhcCCCcccceeeeeeeCCcceEEEEecCCCCHHHhhcCC--C---chHHHHHHHHHHHhchhhcCC
Q 044022           11 HTYGSCINNITYAAQMSHNHILKRIGCCLQTPIPILVFQSVEYGTLRDCIFGA--P---LPRLKIASDIVNSLAYLHFGF   85 (241)
Q Consensus        11 ~~~~~~~~e~~~l~~l~h~~iv~~~~~~~~~~~~~lv~e~~~~~sL~~~l~~~--~---~~~~~~~~~i~~~l~~lh~~~   85 (241)
                      ...+++.+|++++++++||||+++++++...+..++||||+++++|.+++...  .   .....++.+++.||.|||   
T Consensus        58 ~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~~~~~~l~~~~~~~~~~~~~~~~~~~~~~i~~~l~~lH---  134 (302)
T 2j7t_A           58 EELEDYIVEIEILATCDHPYIVKLLGAYYHDGKLWIMIEFCPGGAVDAIMLELDRGLTEPQIQVVCRQMLEALNFLH---  134 (302)
T ss_dssp             CCHHHHHHHHHHHHHCCCTTBCCEEEEEECC-CEEEEEECCTTEEHHHHHHHHTSCCCHHHHHHHHHHHHHHHHHHH---
T ss_pred             HHHHHHHHHHHHHhcCCCCCEeeeeeeeeeCCeEEEEEEeCCCCcHHHHHHhhccCCCHHHHHHHHHHHHHHHHHHh---
Confidence            45778999999999999999999999999999999999999999999987542  1   246789999999999999   


Q ss_pred             CCCceeccCCCCCeeecCCCCeEEeeccCceecCCCCcceeecccccCCCccCccccc-----ccCCCcchhhHHHHHHH
Q 044022           86 PRPIVLRNFKTQNILFNEENVAKWFDFLLSISIPEGETHITTDRVIGTRGYSAPEYIS-----ICVLNEKSNVFSFGAFL  160 (241)
Q Consensus        86 ~~~ivh~dl~~~nil~~~~~~~~l~df~~~~~~~~~~~~~~~~~~~~~~~~~aPE~~~-----~~~~~~~~Di~s~G~~~  160 (241)
                      +.+++|+||||+||+++.++.++|+|||.+.......  .......+++.|+|||.+.     ...++.++||||||+++
T Consensus       135 ~~~i~H~dlkp~Nil~~~~~~~kl~Dfg~~~~~~~~~--~~~~~~~~~~~y~aPE~~~~~~~~~~~~~~~~Di~slG~il  212 (302)
T 2j7t_A          135 SKRIIHRDLKAGNVLMTLEGDIRLADFGVSAKNLKTL--QKRDSFIGTPYWMAPEVVMCETMKDTPYDYKADIWSLGITL  212 (302)
T ss_dssp             HTTCCCCCCSGGGEEECTTSCEEECCCHHHHHHHHHH--HC-----CCGGGCCHHHHHHHHTTSTTTTTHHHHHHHHHHH
T ss_pred             cCCcccCCCCHHHEEECCCCCEEEEECCCCccccccc--cccccccCChhhcCCeeeccccCCCCCCchhhhHHHHHHHH
Confidence            8999999999999999999999999999864321110  0112346889999999983     56788999999999999


Q ss_pred             HHHHhcCcccccccccCCCcccchHHHHHHHhhhcccCCCCCCccccCCCchhHHHHHHHHHHHHHHhccCCCCCCCCCC
Q 044022          161 FELLAGRIHIWDLLKDTHDHGCFFNEYLKNYLEDKRFTGIPAPIIVQDIPCIEKEQQLHASAQLTLECVNNSPEDRPTMV  240 (241)
Q Consensus       161 ~~~~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~cl~~~p~~Rpt~~  240 (241)
                      |+|++|..||....         ..+......... .....   ...        ..+..+.+++.+||+.||++|||++
T Consensus       213 ~~l~~g~~p~~~~~---------~~~~~~~~~~~~-~~~~~---~~~--------~~~~~l~~li~~~l~~dp~~Rps~~  271 (302)
T 2j7t_A          213 IEMAQIEPPHHELN---------PMRVLLKIAKSD-PPTLL---TPS--------KWSVEFRDFLKIALDKNPETRPSAA  271 (302)
T ss_dssp             HHHHHSSCTTTTSC---------HHHHHHHHHHSC-CCCCS---SGG--------GSCHHHHHHHHHHSCSCTTTSCCHH
T ss_pred             HHHhcCCCCCccCC---------HHHHHHHHhccC-CcccC---Ccc--------ccCHHHHHHHHHHcccChhhCCCHH
Confidence            99999999996521         111111111111 10000   011        2235788999999999999999975


Q ss_pred             C
Q 044022          241 D  241 (241)
Q Consensus       241 e  241 (241)
                      |
T Consensus       272 ~  272 (302)
T 2j7t_A          272 Q  272 (302)
T ss_dssp             H
T ss_pred             H
Confidence            3


No 212
>2r3i_A Cell division protein kinase 2; serine/threonine-protein kinase, cell cycle, inhibition, cyclin-dependent kinase, cancer, ATP-binding; HET: SCF; 1.28A {Homo sapiens} PDB: 2r3j_A* 2r3k_A* 2r3l_A* 2r3m_A* 2r3n_A* 2r3o_A* 2r3p_A* 2r3q_A* 1jvp_P* 1buh_A 1ckp_A* 1di8_A* 1dm2_A* 1f5q_A 1fin_A* 1fq1_B* 1fvt_A* 1fvv_A* 1g5s_A* 1gih_A* ...
Probab=100.00  E-value=1.5e-37  Score=249.99  Aligned_cols=156  Identities=21%  Similarity=0.269  Sum_probs=134.1

Q ss_pred             ccHHHHHHHHHHHHhcCCCcccceeeeeeeCCcceEEEEecCCCCHHHhhcCCC------chHHHHHHHHHHHhchhhcC
Q 044022           11 HTYGSCINNITYAAQMSHNHILKRIGCCLQTPIPILVFQSVEYGTLRDCIFGAP------LPRLKIASDIVNSLAYLHFG   84 (241)
Q Consensus        11 ~~~~~~~~e~~~l~~l~h~~iv~~~~~~~~~~~~~lv~e~~~~~sL~~~l~~~~------~~~~~~~~~i~~~l~~lh~~   84 (241)
                      ...+.+.+|++++++++||||+++++++...+..++||||+. ++|.+++....      .....++.+++.||.|||  
T Consensus        44 ~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~~~-~~L~~~~~~~~~~~~~~~~~~~~~~~i~~~l~~lH--  120 (299)
T 2r3i_A           44 GVPSTAIREISLLKELNHPNIVKLLDVIHTENKLYLVFEFLH-QDLKKFMDASALTGIPLPLIKSYLFQLLQGLAFCH--  120 (299)
T ss_dssp             -CCHHHHHHHHHHTTCCCTTBCCEEEEEEETTEEEEEEECCS-EEHHHHHHHTTTTCCCHHHHHHHHHHHHHHHHHHH--
T ss_pred             hhHHHHHHHHHHHHHcCCCCeeeEEEEEecCCceEEEEEccc-CCHHHHHHhhhccCCCHHHHHHHHHHHHHHHHHHH--
Confidence            345778899999999999999999999999999999999997 69999886542      146788999999999999  


Q ss_pred             CCCCceeccCCCCCeeecCCCCeEEeeccCceecCCCCcceeecccccCCCccCcccccccC-CCcchhhHHHHHHHHHH
Q 044022           85 FPRPIVLRNFKTQNILFNEENVAKWFDFLLSISIPEGETHITTDRVIGTRGYSAPEYISICV-LNEKSNVFSFGAFLFEL  163 (241)
Q Consensus        85 ~~~~ivh~dl~~~nil~~~~~~~~l~df~~~~~~~~~~~~~~~~~~~~~~~~~aPE~~~~~~-~~~~~Di~s~G~~~~~~  163 (241)
                       +.+++|+||||+||+++.++.++|+|||.+.........  .....+++.|+|||.+.+.. ++.++||||||+++|+|
T Consensus       121 -~~~i~H~dlkp~Nili~~~~~~kl~dfg~~~~~~~~~~~--~~~~~~~~~y~aPE~~~~~~~~~~~~Di~slG~~l~~l  197 (299)
T 2r3i_A          121 -SHRVLHRDLKPQNLLINTEGAIKLADFGLARAFGVPVRT--YTHEVVTLWYRAPEILLGAKYYSTAVDIWSLGCIFAEM  197 (299)
T ss_dssp             -HTTCCCCCCCGGGEEECTTSCEEECSTTHHHHHCCCSBC--TTSCBCCCTTCCHHHHTTCSSCCTHHHHHHHHHHHHHH
T ss_pred             -HCCccCCCCCHHHeEEcCCCCEEECcchhhhhccCCccc--cCcccccccccCcHHhhccccCChHHHHHHHHHHHHHH
Confidence             899999999999999999999999999998765433211  12346789999999998765 78999999999999999


Q ss_pred             HhcCccccc
Q 044022          164 LAGRIHIWD  172 (241)
Q Consensus       164 ~~g~~p~~~  172 (241)
                      ++|+.||..
T Consensus       198 ~~g~~pf~~  206 (299)
T 2r3i_A          198 VTRRALFPG  206 (299)
T ss_dssp             HHSSCSCCC
T ss_pred             HhCCCCCCC
Confidence            999999965


No 213
>3p23_A Serine/threonine-protein kinase/endoribonuclease; kinase domain, kinase and RNAse function, ATP binding ssRNA dephosphorylated, hydrolase; HET: ADP; 2.70A {Homo sapiens}
Probab=100.00  E-value=2.6e-37  Score=260.67  Aligned_cols=203  Identities=19%  Similarity=0.254  Sum_probs=149.8

Q ss_pred             HHHHHHHHHHHhc-CCCcccceeeeeeeCCcceEEEEecCCCCHHHhhcCCC-----chHHHHHHHHHHHhchhhcCCCC
Q 044022           14 GSCINNITYAAQM-SHNHILKRIGCCLQTPIPILVFQSVEYGTLRDCIFGAP-----LPRLKIASDIVNSLAYLHFGFPR   87 (241)
Q Consensus        14 ~~~~~e~~~l~~l-~h~~iv~~~~~~~~~~~~~lv~e~~~~~sL~~~l~~~~-----~~~~~~~~~i~~~l~~lh~~~~~   87 (241)
                      ..+.+|+++++++ +|||||++++++......++||||+. |+|.+++....     .....++.||+.||.|||   +.
T Consensus        62 ~~~~~E~~~l~~l~~HpnIv~l~~~~~~~~~~~lv~E~~~-g~L~~~l~~~~~~~~~~~~~~i~~qi~~aL~~LH---~~  137 (432)
T 3p23_A           62 SFADREVQLLRESDEHPNVIRYFCTEKDRQFQYIAIELCA-ATLQEYVEQKDFAHLGLEPITLLQQTTSGLAHLH---SL  137 (432)
T ss_dssp             EECHHHHHHHHHSCCCTTBCCEEEEEEETTEEEEEEECCS-EEHHHHHHSSSCCCCSSCHHHHHHHHHHHHHHHH---HT
T ss_pred             HHHHHHHHHHHhccCCCCcCeEEEEEecCCEEEEEEECCC-CCHHHHHHhcCCCccchhHHHHHHHHHHHHHHHH---HC
Confidence            3467899999999 89999999999999999999999996 69999986553     256789999999999999   89


Q ss_pred             CceeccCCCCCeeecC-----CCCeEEeeccCceecCCCCc-ceeecccccCCCccCccccc---ccCCCcchhhHHHHH
Q 044022           88 PIVLRNFKTQNILFNE-----ENVAKWFDFLLSISIPEGET-HITTDRVIGTRGYSAPEYIS---ICVLNEKSNVFSFGA  158 (241)
Q Consensus        88 ~ivh~dl~~~nil~~~-----~~~~~l~df~~~~~~~~~~~-~~~~~~~~~~~~~~aPE~~~---~~~~~~~~Di~s~G~  158 (241)
                      +|+||||||+|||++.     ...++|+|||++........ ........||+.|+|||++.   ...++.++|||||||
T Consensus       138 ~ivHrDlKp~NIll~~~~~~~~~~~kL~DFG~a~~~~~~~~~~~~~~~~~gt~~y~APE~l~~~~~~~~t~~~DiwSlG~  217 (432)
T 3p23_A          138 NIVHRDLKPHNILISMPNAHGKIKAMISDFGLCKKLAVGRHSFSRRSGVPGTEGWIAPEMLSEDCKENPTYTVDIFSAGC  217 (432)
T ss_dssp             TCCCCCCSTTSEEECCCBTTTBCCEEECCTTEEECC------------CCSCTTSCCGGGTSCC---CCCTHHHHHHHHH
T ss_pred             cCEeCCCCHHHEEEecCCCCCceeEEEecccceeeccCCCcceeeccccCCCcCccChhhhhcccccCCCcHHHHHHHHH
Confidence            9999999999999953     33678999999986654321 11223457899999999997   356778999999999


Q ss_pred             HHHHHHh-cCcccccccccCCCcccchHHHHHHHhhhcccCCCCCCccccCCCchhHHHHHHHHHHHHHHhccCCCCCCC
Q 044022          159 FLFELLA-GRIHIWDLLKDTHDHGCFFNEYLKNYLEDKRFTGIPAPIIVQDIPCIEKEQQLHASAQLTLECVNNSPEDRP  237 (241)
Q Consensus       159 ~~~~~~~-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~cl~~~p~~Rp  237 (241)
                      ++|+|++ |..||.....          .............     ....      ....+..+.+|+.+||+.||++||
T Consensus       218 il~ellt~g~~pf~~~~~----------~~~~~~~~~~~~~-----~~~~------~~~~~~~~~~li~~~L~~dP~~Rp  276 (432)
T 3p23_A          218 VFYYVISEGSHPFGKSLQ----------RQANILLGACSLD-----CLHP------EKHEDVIARELIEKMIAMDPQKRP  276 (432)
T ss_dssp             HHHHHHTTSCBTTBSTTT----------HHHHHHTTCCCCT-----TSCT------TCHHHHHHHHHHHHHSCSSGGGSC
T ss_pred             HHHHHHcCCCCCcchhhH----------HHHHHHhccCCcc-----ccCc------cccccHHHHHHHHHHHhCCHhhCC
Confidence            9999999 9999854111          1111111111110     0000      013445688999999999999999


Q ss_pred             CCCC
Q 044022          238 TMVD  241 (241)
Q Consensus       238 t~~e  241 (241)
                      |++|
T Consensus       277 s~~e  280 (432)
T 3p23_A          277 SAKH  280 (432)
T ss_dssp             CHHH
T ss_pred             CHHH
Confidence            9753


No 214
>4exu_A Mitogen-activated protein kinase 13; P38 kinase, transferase; 1.70A {Homo sapiens} PDB: 4eyj_A* 4eym_A* 3coi_A
Probab=100.00  E-value=3.3e-37  Score=255.56  Aligned_cols=163  Identities=20%  Similarity=0.266  Sum_probs=133.6

Q ss_pred             Ccccccccc-cccHHHHHHHHHHHHhcCCCcccceeeeeeeCCcc------eEEEEecCCCCHHHhhcCCCc--hHHHHH
Q 044022            1 MKFYGHEYH-RHTYGSCINNITYAAQMSHNHILKRIGCCLQTPIP------ILVFQSVEYGTLRDCIFGAPL--PRLKIA   71 (241)
Q Consensus         1 iK~~~~~~~-~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~~~~~~------~lv~e~~~~~sL~~~l~~~~~--~~~~~~   71 (241)
                      ||++..... .....++.+|+.+++.++||||+++++++...+..      ++||||+. ++|.+.+...-.  .+..++
T Consensus        72 iK~~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~~~~~~~lv~e~~~-~~l~~~~~~~~~~~~~~~i~  150 (371)
T 4exu_A           72 IKKLSRPFQSEIFAKRAYRELLLLKHMQHENVIGLLDVFTPASSLRNFYDFYLVMPFMQ-TDLQKIMGMEFSEEKIQYLV  150 (371)
T ss_dssp             EEEECSTTSSHHHHHHHHHHHHHHHHCCCTTBCCCSEEECSCSSSTTCCCCEEEEECCC-EEHHHHTTSCCCHHHHHHHH
T ss_pred             EEEecccccchhHHHHHHHHHHHHHhcCCCCchhhhhheeccCCcccceeEEEEEcccc-ccHHHHhhcCCCHHHHHHHH
Confidence            355543322 23467788999999999999999999999876654      99999997 799888865422  567899


Q ss_pred             HHHHHHhchhhcCCCCCceeccCCCCCeeecCCCCeEEeeccCceecCCCCcceeecccccCCCccCcccccc-cCCCcc
Q 044022           72 SDIVNSLAYLHFGFPRPIVLRNFKTQNILFNEENVAKWFDFLLSISIPEGETHITTDRVIGTRGYSAPEYISI-CVLNEK  150 (241)
Q Consensus        72 ~~i~~~l~~lh~~~~~~ivh~dl~~~nil~~~~~~~~l~df~~~~~~~~~~~~~~~~~~~~~~~~~aPE~~~~-~~~~~~  150 (241)
                      .+++.||.|||   +.+++||||||+||+++.++.++|+|||.+.......     ....+|+.|+|||++.+ ..++.+
T Consensus       151 ~qi~~aL~~LH---~~~ivH~Dikp~NIll~~~~~~kL~Dfg~a~~~~~~~-----~~~~~t~~y~aPE~~~~~~~~~~~  222 (371)
T 4exu_A          151 YQMLKGLKYIH---SAGVVHRDLKPGNLAVNEDCELKILDFGLARHADAEM-----TGYVVTRWYRAPEVILSWMHYNQT  222 (371)
T ss_dssp             HHHHHHHHHHH---HTTCCCSCCCGGGEEECTTCCEEECSTTCC-------------CTTCCCTTSCHHHHSCCSCCCTT
T ss_pred             HHHHHHHHHHH---HCCCcCCCcCHHHeEECCCCCEEEEecCcccccccCc-----CCcccCccccCHHHhcCCCCCCcH
Confidence            99999999999   8999999999999999999999999999997554321     33568999999999987 678999


Q ss_pred             hhhHHHHHHHHHHHhcCccccc
Q 044022          151 SNVFSFGAFLFELLAGRIHIWD  172 (241)
Q Consensus       151 ~Di~s~G~~~~~~~~g~~p~~~  172 (241)
                      +||||||+++|+|++|+.||..
T Consensus       223 ~DiwslG~il~el~~g~~pf~~  244 (371)
T 4exu_A          223 VDIWSVGCIMAEMLTGKTLFKG  244 (371)
T ss_dssp             HHHHHHHHHHHHHHHSSCSCCC
T ss_pred             HhHHHHHHHHHHHHhCCCCCCC
Confidence            9999999999999999999964


No 215
>2x7f_A TRAF2 and NCK-interacting protein kinase; serine/threonine-protein kinase, phosphoprotein; HET: 824; 2.80A {Homo sapiens}
Probab=100.00  E-value=9e-38  Score=254.31  Aligned_cols=203  Identities=21%  Similarity=0.262  Sum_probs=151.5

Q ss_pred             cHHHHHHHHHHHHhc-CCCcccceeeeeee------CCcceEEEEecCCCCHHHhhcCCC---c---hHHHHHHHHHHHh
Q 044022           12 TYGSCINNITYAAQM-SHNHILKRIGCCLQ------TPIPILVFQSVEYGTLRDCIFGAP---L---PRLKIASDIVNSL   78 (241)
Q Consensus        12 ~~~~~~~e~~~l~~l-~h~~iv~~~~~~~~------~~~~~lv~e~~~~~sL~~~l~~~~---~---~~~~~~~~i~~~l   78 (241)
                      ....+.+|+.+++++ +||||+++++++..      .+..++||||+++++|.+++....   .   ....++.+++.||
T Consensus        63 ~~~~~~~e~~~l~~l~~h~~i~~~~~~~~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~i~~qi~~~l  142 (326)
T 2x7f_A           63 EEEEIKQEINMLKKYSHHRNIATYYGAFIKKNPPGMDDQLWLVMEFCGAGSVTDLIKNTKGNTLKEEWIAYICREILRGL  142 (326)
T ss_dssp             TTHHHHHHHHHHHHHCCSTTBCCEEEEEEECC--CCCCEEEEEEECCTTEEHHHHHHHSGGGCCCHHHHHHHHHHHHHHH
T ss_pred             cHHHHHHHHHHHHhccCCCCeeeeeeEEeeccCccccceEEEEEEcCCCCcHHHHHHhcccCCCCHHHHHHHHHHHHHHH
Confidence            467889999999999 89999999999987      457899999999999999986531   1   3678899999999


Q ss_pred             chhhcCCCCCceeccCCCCCeeecCCCCeEEeeccCceecCCCCcceeecccccCCCccCccccc-----ccCCCcchhh
Q 044022           79 AYLHFGFPRPIVLRNFKTQNILFNEENVAKWFDFLLSISIPEGETHITTDRVIGTRGYSAPEYIS-----ICVLNEKSNV  153 (241)
Q Consensus        79 ~~lh~~~~~~ivh~dl~~~nil~~~~~~~~l~df~~~~~~~~~~~~~~~~~~~~~~~~~aPE~~~-----~~~~~~~~Di  153 (241)
                      .|||   +.+++|+||||+||+++.++.++|+|||.+........  ......+++.|+|||.+.     ...++.++||
T Consensus       143 ~~lH---~~~ivH~dlkp~NIl~~~~~~~kl~Dfg~~~~~~~~~~--~~~~~~~~~~y~aPE~~~~~~~~~~~~~~~~Di  217 (326)
T 2x7f_A          143 SHLH---QHKVIHRDIKGQNVLLTENAEVKLVDFGVSAQLDRTVG--RRNTFIGTPYWMAPEVIACDENPDATYDFKSDL  217 (326)
T ss_dssp             HHHH---HTTCCCCCCSGGGEEECTTCCEEECCCTTTC---------------CCGGGCCHHHHC--------CCTTHHH
T ss_pred             HHHH---HCCccccCCcHHHEEEcCCCCEEEeeCcCceecCcCcc--ccccccCCccccChhhhccccccCcCCCccchH
Confidence            9999   89999999999999999999999999999876543211  123346899999999987     4568899999


Q ss_pred             HHHHHHHHHHHhcCcccccccccCCCcccchHHHHHHHhhhcccCCCCCCccccCCCchhHHHHHHHHHHHHHHhccCCC
Q 044022          154 FSFGAFLFELLAGRIHIWDLLKDTHDHGCFFNEYLKNYLEDKRFTGIPAPIIVQDIPCIEKEQQLHASAQLTLECVNNSP  233 (241)
Q Consensus       154 ~s~G~~~~~~~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~cl~~~p  233 (241)
                      ||||+++|+|++|..||....         ............ .....    ...        .+..+.+++.+||..||
T Consensus       218 ~slG~il~~l~~g~~p~~~~~---------~~~~~~~~~~~~-~~~~~----~~~--------~~~~l~~li~~~l~~dp  275 (326)
T 2x7f_A          218 WSLGITAIEMAEGAPPLCDMH---------PMRALFLIPRNP-APRLK----SKK--------WSKKFQSFIESCLVKNH  275 (326)
T ss_dssp             HHHHHHHHHHHHSSCTTTTSC---------HHHHHHHHHHSC-CCCCS----CSC--------SCHHHHHHHHHHCCSSG
T ss_pred             HHHHHHHHHHHhCCCCCCCCc---------HHHHHHHhhcCc-cccCC----ccc--------cCHHHHHHHHHHhccCh
Confidence            999999999999999995421         111111111111 11110    111        22578999999999999


Q ss_pred             CCCCCCCC
Q 044022          234 EDRPTMVD  241 (241)
Q Consensus       234 ~~Rpt~~e  241 (241)
                      ++|||++|
T Consensus       276 ~~Rps~~~  283 (326)
T 2x7f_A          276 SQRPATEQ  283 (326)
T ss_dssp             GGSCCHHH
T ss_pred             hhCCCHHH
Confidence            99999753


No 216
>2ycf_A Serine/threonine-protein kinase CHK2; transferase, anticancer, anticancer drug design; HET: YCF; 1.77A {Homo sapiens} PDB: 2yiq_A* 2w7x_A* 2ycq_A* 2ycs_A* 2w0j_A* 2yir_A* 2yit_A* 2wtj_A* 2cn8_A* 2wtc_A* 2wtd_A* 2wti_A* 2cn5_A* 2xbj_A* 2xm8_A* 2xm9_A* 2xk9_A* 2ycr_A*
Probab=100.00  E-value=6e-38  Score=255.13  Aligned_cols=203  Identities=20%  Similarity=0.244  Sum_probs=154.4

Q ss_pred             HHHHHHHHHHHHhcCCCcccceeeeeeeCCcceEEEEecCCCCHHHhhcCCCc----hHHHHHHHHHHHhchhhcCCCCC
Q 044022           13 YGSCINNITYAAQMSHNHILKRIGCCLQTPIPILVFQSVEYGTLRDCIFGAPL----PRLKIASDIVNSLAYLHFGFPRP   88 (241)
Q Consensus        13 ~~~~~~e~~~l~~l~h~~iv~~~~~~~~~~~~~lv~e~~~~~sL~~~l~~~~~----~~~~~~~~i~~~l~~lh~~~~~~   88 (241)
                      ...+.+|++++++++||||+++++++..+. .++||||+++++|.+++.....    ....++.+++.||.|||   +.+
T Consensus        59 ~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~-~~lv~e~~~~~~L~~~~~~~~~~~~~~~~~~~~qi~~~l~~lH---~~~  134 (322)
T 2ycf_A           59 ALNVETEIEILKKLNHPCIIKIKNFFDAED-YYIVLELMEGGELFDKVVGNKRLKEATCKLYFYQMLLAVQYLH---ENG  134 (322)
T ss_dssp             --CHHHHHHHHHHCCCTTBCCEEEEEESSS-EEEEEECCTTEETHHHHSTTCCCCHHHHHHHHHHHHHHHHHHH---HTT
T ss_pred             hhhHHHHHHHHHhCCCCCCceEeeEEcCCc-eEEEEecCCCCcHHHHHhccCCCCHHHHHHHHHHHHHHHHHHH---HCC
Confidence            456889999999999999999999986654 8999999999999998876532    46778999999999999   899


Q ss_pred             ceeccCCCCCeeecCCCC---eEEeeccCceecCCCCcceeecccccCCCccCccccc---ccCCCcchhhHHHHHHHHH
Q 044022           89 IVLRNFKTQNILFNEENV---AKWFDFLLSISIPEGETHITTDRVIGTRGYSAPEYIS---ICVLNEKSNVFSFGAFLFE  162 (241)
Q Consensus        89 ivh~dl~~~nil~~~~~~---~~l~df~~~~~~~~~~~~~~~~~~~~~~~~~aPE~~~---~~~~~~~~Di~s~G~~~~~  162 (241)
                      ++||||||+||+++.++.   +||+|||.+........   .....|++.|+|||++.   ...++.++||||||+++|+
T Consensus       135 ivH~dlkp~NIl~~~~~~~~~~kl~Dfg~~~~~~~~~~---~~~~~gt~~y~aPE~~~~~~~~~~~~~~Di~slG~il~~  211 (322)
T 2ycf_A          135 IIHRDLKPENVLLSSQEEDCLIKITDFGHSKILGETSL---MRTLCGTPTYLAPEVLVSVGTAGYNRAVDCWSLGVILFI  211 (322)
T ss_dssp             EECCCCSGGGEEESSSSSSCCEEECCCTTCEECCCCHH---HHHHHSCCTTCCHHHHHHTTTTTCTTHHHHHHHHHHHHH
T ss_pred             eeccCCCHHHEEEecCCCCCeEEEccCccceecccccc---cccccCCcCccCchhhccCCCCCCCchhhHHHHHHHHHH
Confidence            999999999999987664   99999999987654321   12346899999999974   4568899999999999999


Q ss_pred             HHhcCcccccccccCCCcccchHHHHHHHhhhcccCCCCCCccccCCCchhHHHHHHHHHHHHHHhccCCCCCCCCCCC
Q 044022          163 LLAGRIHIWDLLKDTHDHGCFFNEYLKNYLEDKRFTGIPAPIIVQDIPCIEKEQQLHASAQLTLECVNNSPEDRPTMVD  241 (241)
Q Consensus       163 ~~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~cl~~~p~~Rpt~~e  241 (241)
                      |++|..||......     .......    ..+....  .+...        ...+..+.+++.+||+.||++|||++|
T Consensus       212 l~~g~~pf~~~~~~-----~~~~~~~----~~~~~~~--~~~~~--------~~~~~~~~~li~~~l~~dP~~Rps~~~  271 (322)
T 2ycf_A          212 CLSGYPPFSEHRTQ-----VSLKDQI----TSGKYNF--IPEVW--------AEVSEKALDLVKKLLVVDPKARFTTEE  271 (322)
T ss_dssp             HHHSSCSSCSTTCS-----SCHHHHH----HHTCCCC--CHHHH--------TTSCHHHHHHHHHHSCSSTTTSCCHHH
T ss_pred             HHhCCCCCcccchH-----HHHHHHH----HhCcccc--Cchhh--------hhcCHHHHHHHHHHcccCHhhCCCHHH
Confidence            99999999652211     1111111    1111100  00000        122367899999999999999999753


No 217
>2wei_A Calmodulin-domain protein kinase 1, putative; nucleotide-binding, serine/threonine-protein kinase, CGD3_920, transferase; HET: VGG; 1.65A {Cryptosporidium parvum iowa II} PDB: 3dfa_A 3ma6_A*
Probab=100.00  E-value=7.7e-38  Score=250.53  Aligned_cols=214  Identities=22%  Similarity=0.290  Sum_probs=162.1

Q ss_pred             Cccccccc-ccccHHHHHHHHHHHHhcCCCcccceeeeeeeCCcceEEEEecCCCCHHHhhcCCC----chHHHHHHHHH
Q 044022            1 MKFYGHEY-HRHTYGSCINNITYAAQMSHNHILKRIGCCLQTPIPILVFQSVEYGTLRDCIFGAP----LPRLKIASDIV   75 (241)
Q Consensus         1 iK~~~~~~-~~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~~~~~~~lv~e~~~~~sL~~~l~~~~----~~~~~~~~~i~   75 (241)
                      ||++.... .....+.+.+|++++++++||||+++++++...+..++|+||+++++|.+++....    .....++.+++
T Consensus        52 lK~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~i~~qi~  131 (287)
T 2wei_A           52 VKVINKASAKNKDTSTILREVELLKKLDHPNIMKLFEILEDSSSFYIVGELYTGGELFDEIIKRKRFSEHDAARIIKQVF  131 (287)
T ss_dssp             EEEEEGGGBSSSCHHHHHHHHHHHHTCCCTTBCCEEEEEECSSEEEEEECCCCSCBHHHHHHHHSSCCHHHHHHHHHHHH
T ss_pred             EEEecccccchHHHHHHHHHHHHHHhccCCCccEEEEEEeCCCeEEEEEEccCCCCHHHHHHhcCCCCHHHHHHHHHHHH
Confidence            35554333 23457789999999999999999999999999999999999999999988875431    25678999999


Q ss_pred             HHhchhhcCCCCCceeccCCCCCeeecCC---CCeEEeeccCceecCCCCcceeecccccCCCccCcccccccCCCcchh
Q 044022           76 NSLAYLHFGFPRPIVLRNFKTQNILFNEE---NVAKWFDFLLSISIPEGETHITTDRVIGTRGYSAPEYISICVLNEKSN  152 (241)
Q Consensus        76 ~~l~~lh~~~~~~ivh~dl~~~nil~~~~---~~~~l~df~~~~~~~~~~~~~~~~~~~~~~~~~aPE~~~~~~~~~~~D  152 (241)
                      .||.|||   +.+++|+||||+||+++.+   +.++|+|||.+.........   ....+++.|+|||.+.+ .++.++|
T Consensus       132 ~~l~~LH---~~~i~H~dl~p~NIlv~~~~~~~~~kL~Dfg~~~~~~~~~~~---~~~~~~~~y~aPE~~~~-~~~~~~D  204 (287)
T 2wei_A          132 SGITYMH---KHNIVHRDLKPENILLESKEKDCDIKIIDFGLSTCFQQNTKM---KDRIGTAYYIAPEVLRG-TYDEKCD  204 (287)
T ss_dssp             HHHHHHH---HTTCCCSCCCGGGEEESCSSTTCCEEECSTTGGGTBCCCSSC---SCHHHHHTTCCHHHHTT-CCCTHHH
T ss_pred             HHHHHHH---HCCeeccCCChhhEEEecCCCcccEEEeccCcceeecCCCcc---ccccCcccccChHHhcC-CCCCchh
Confidence            9999999   8999999999999999754   47999999998765443221   22357889999998875 4889999


Q ss_pred             hHHHHHHHHHHHhcCcccccccccCCCcccchHHHHHHHhhhcccCCCCCCccccCCCchhHHHHHHHHHHHHHHhccCC
Q 044022          153 VFSFGAFLFELLAGRIHIWDLLKDTHDHGCFFNEYLKNYLEDKRFTGIPAPIIVQDIPCIEKEQQLHASAQLTLECVNNS  232 (241)
Q Consensus       153 i~s~G~~~~~~~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~cl~~~  232 (241)
                      |||||+++|+|++|..||....         ..+....... +... ...+. ..        ..+..+.+++.+||+.|
T Consensus       205 i~slG~~l~~l~~g~~p~~~~~---------~~~~~~~~~~-~~~~-~~~~~-~~--------~~~~~~~~li~~~l~~d  264 (287)
T 2wei_A          205 VWSAGVILYILLSGTPPFYGKN---------EYDILKRVET-GKYA-FDLPQ-WR--------TISDDAKDLIRKMLTFH  264 (287)
T ss_dssp             HHHHHHHHHHHHHSSCSSCCSS---------HHHHHHHHHH-CCCC-CCSGG-GT--------TSCHHHHHHHHHHTCSS
T ss_pred             hHhHHHHHHHHHhCCCCCCCCC---------HHHHHHHHHc-CCCC-CCchh-hh--------hcCHHHHHHHHHHcccC
Confidence            9999999999999999996521         1122222211 1110 00000 01        22357889999999999


Q ss_pred             CCCCCCCCC
Q 044022          233 PEDRPTMVD  241 (241)
Q Consensus       233 p~~Rpt~~e  241 (241)
                      |++|||++|
T Consensus       265 p~~Rps~~e  273 (287)
T 2wei_A          265 PSLRITATQ  273 (287)
T ss_dssp             GGGSCCHHH
T ss_pred             hhhCcCHHH
Confidence            999999853


No 218
>3pg1_A Mitogen-activated protein kinase, putative (MAP K protein); EPK Ser/Thr protein kinase fold, Ser/Thr protein kinase, TRA; 1.95A {Leishmania major} PDB: 3uib_A*
Probab=100.00  E-value=7.4e-38  Score=258.43  Aligned_cols=153  Identities=19%  Similarity=0.219  Sum_probs=123.8

Q ss_pred             HHHHHHHHHHHHhcCCCcccceeeeeeeC-----CcceEEEEecCCCCHHHhhcCCC-----chHHHHHHHHHHHhchhh
Q 044022           13 YGSCINNITYAAQMSHNHILKRIGCCLQT-----PIPILVFQSVEYGTLRDCIFGAP-----LPRLKIASDIVNSLAYLH   82 (241)
Q Consensus        13 ~~~~~~e~~~l~~l~h~~iv~~~~~~~~~-----~~~~lv~e~~~~~sL~~~l~~~~-----~~~~~~~~~i~~~l~~lh   82 (241)
                      .+.+.+|++++++++||||+++++++...     ...++||||+. |+|.+.+....     .....++.+++.||.|||
T Consensus        73 ~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~~~~~~lv~e~~~-~~l~~~~~~~~~~~~~~~~~~~~~qi~~~l~~lH  151 (362)
T 3pg1_A           73 CKRVLREIRLLNHFHHPNILGLRDIFVHFEEPAMHKLYLVTELMR-TDLAQVIHDQRIVISPQHIQYFMYHILLGLHVLH  151 (362)
T ss_dssp             HHHHHHHHHHHHHCCCTTBCCCSEEEEECCTTTCCEEEEEEECCS-EEHHHHHHCTTSCCCHHHHHHHHHHHHHHHHHHH
T ss_pred             HHHHHHHHHHHHhCCCcCccceeeeEEeccCCCcceEEEEEccCC-CCHHHHHHhcccCCCHHHHHHHHHHHHHHHHHHH
Confidence            37899999999999999999999998643     35799999997 68888876542     146789999999999999


Q ss_pred             cCCCCCceeccCCCCCeeecCCCCeEEeeccCceecCCCCcceeecccccCCCccCcccccc-cCCCcchhhHHHHHHHH
Q 044022           83 FGFPRPIVLRNFKTQNILFNEENVAKWFDFLLSISIPEGETHITTDRVIGTRGYSAPEYISI-CVLNEKSNVFSFGAFLF  161 (241)
Q Consensus        83 ~~~~~~ivh~dl~~~nil~~~~~~~~l~df~~~~~~~~~~~~~~~~~~~~~~~~~aPE~~~~-~~~~~~~Di~s~G~~~~  161 (241)
                         +.+++|+||||+||+++.++.++|+|||.+........   .....+++.|+|||++.+ ..++.++||||||+++|
T Consensus       152 ---~~~ivH~Dlkp~NIl~~~~~~~kl~Dfg~~~~~~~~~~---~~~~~~t~~y~aPE~~~~~~~~~~~~DiwslG~il~  225 (362)
T 3pg1_A          152 ---EAGVVHRDLHPGNILLADNNDITICDFNLAREDTADAN---KTHYVTHRWYRAPELVMQFKGFTKLVDMWSAGCVMA  225 (362)
T ss_dssp             ---HTTCCCCCCCGGGEEECTTCCEEECCTTC------------------CGGGCCHHHHTTCTTCCTHHHHHHHHHHHH
T ss_pred             ---HCcCEecCCChHHEEEcCCCCEEEEecCcccccccccc---cceecccceecCcHHhcCCCCCCcHhHHHhHHHHHH
Confidence               89999999999999999999999999999975443322   133468889999999876 67899999999999999


Q ss_pred             HHHhcCccccc
Q 044022          162 ELLAGRIHIWD  172 (241)
Q Consensus       162 ~~~~g~~p~~~  172 (241)
                      +|++|+.||..
T Consensus       226 ~l~~g~~pf~~  236 (362)
T 3pg1_A          226 EMFNRKALFRG  236 (362)
T ss_dssp             HHHHSSCSCCC
T ss_pred             HHHhCCCCCCC
Confidence            99999999965


No 219
>2rio_A Serine/threonine-protein kinase/endoribonuclease IRE1; protein-nucleotide complex, ATP-binding, endoplasmic reticulum, glycoprotein; HET: ADP; 2.40A {Saccharomyces cerevisiae} PDB: 3lj0_A* 3lj1_A* 3lj2_A* 3fbv_A* 3sdm_A* 3sdj_A*
Probab=100.00  E-value=1.5e-37  Score=262.59  Aligned_cols=207  Identities=20%  Similarity=0.347  Sum_probs=152.8

Q ss_pred             cHHHHHHHHHHHHhc-CCCcccceeeeeeeCCcceEEEEecCCCCHHHhhcCCCc-----------hHHHHHHHHHHHhc
Q 044022           12 TYGSCINNITYAAQM-SHNHILKRIGCCLQTPIPILVFQSVEYGTLRDCIFGAPL-----------PRLKIASDIVNSLA   79 (241)
Q Consensus        12 ~~~~~~~e~~~l~~l-~h~~iv~~~~~~~~~~~~~lv~e~~~~~sL~~~l~~~~~-----------~~~~~~~~i~~~l~   79 (241)
                      ..+.+.+|+++++++ +||||+++++++...+..++||||+. |+|.+++.....           ..+.++.||+.||.
T Consensus        51 ~~~~~~~E~~~l~~l~~HpnIv~~~~~~~~~~~~~lv~E~~~-gsL~~~l~~~~~~~~~~~~~~~~~~~~i~~qi~~aL~  129 (434)
T 2rio_A           51 FCDIALMEIKLLTESDDHPNVIRYYCSETTDRFLYIALELCN-LNLQDLVESKNVSDENLKLQKEYNPISLLRQIASGVA  129 (434)
T ss_dssp             GHHHHHHHHHHHHHHTTSTTBCCEEEEEECSSEEEEEECCCS-EEHHHHHHTC------------CCHHHHHHHHHHHHH
T ss_pred             HHHHHHHHHHHHHhccCCCCcCeEEEEEecCCeEEEEEecCC-CCHHHHHhccCCCchhhhhccchhHHHHHHHHHHHHH
Confidence            345678999999987 89999999999999999999999996 699999976532           23579999999999


Q ss_pred             hhhcCCCCCceeccCCCCCeeecCC-------------CCeEEeeccCceecCCCCcce--eecccccCCCccCcccccc
Q 044022           80 YLHFGFPRPIVLRNFKTQNILFNEE-------------NVAKWFDFLLSISIPEGETHI--TTDRVIGTRGYSAPEYISI  144 (241)
Q Consensus        80 ~lh~~~~~~ivh~dl~~~nil~~~~-------------~~~~l~df~~~~~~~~~~~~~--~~~~~~~~~~~~aPE~~~~  144 (241)
                      |||   +.+|+||||||+|||++.+             +.+||+|||++..........  ......||+.|+|||++.+
T Consensus       130 ~LH---~~~ivHrDLkp~NILl~~~~~~~~~~~~~~~~~~~kL~DFG~a~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~  206 (434)
T 2rio_A          130 HLH---SLKIIHRDLKPQNILVSTSSRFTADQQTGAENLRILISDFGLCKKLDSGQSSFRTNLNNPSGTSGWRAPELLEE  206 (434)
T ss_dssp             HHH---HTTEECCCCSGGGEEEECCHHHHSCCTTCCCSCEEEECCCTTCEECCC--------------CCTTSCHHHHSC
T ss_pred             HHH---HCCccccCCChHhEEEecCcccccccccCCCceEEEEcccccceecCCCCccceeeecCCCCCCCccCHHHhcc
Confidence            999   8999999999999999754             489999999998765432211  1234578999999999975


Q ss_pred             -------cCCCcchhhHHHHHHHHHHHh-cCcccccccccCCCcccchHHHHHHHhhhcccCCCCCCccccCCCchhHHH
Q 044022          145 -------CVLNEKSNVFSFGAFLFELLA-GRIHIWDLLKDTHDHGCFFNEYLKNYLEDKRFTGIPAPIIVQDIPCIEKEQ  216 (241)
Q Consensus       145 -------~~~~~~~Di~s~G~~~~~~~~-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  216 (241)
                             ..++.++||||||+++|+|++ |..||.....         .+  ....... . ...  ..    .......
T Consensus       207 ~~~~~~~~~~~~~~DiwSlG~il~ellt~g~~Pf~~~~~---------~~--~~i~~~~-~-~~~--~~----~~~~~~~  267 (434)
T 2rio_A          207 SNNLQTKRRLTRSIDIFSMGCVFYYILSKGKHPFGDKYS---------RE--SNIIRGI-F-SLD--EM----KCLHDRS  267 (434)
T ss_dssp             CCTTSCCCCCCTHHHHHHHHHHHHHHHTTSCCTTCSTTT---------HH--HHHHHTC-C-CCC--CC----TTCCCHH
T ss_pred             ccccccccCcchhhhhHhHHHHHHHHHhCCCCCCCCchh---------hH--HHHhcCC-C-Ccc--cc----ccccccc
Confidence                   568899999999999999999 9999954211         00  1111111 0 000  00    0111134


Q ss_pred             HHHHHHHHHHHhccCCCCCCCCCCC
Q 044022          217 QLHASAQLTLECVNNSPEDRPTMVD  241 (241)
Q Consensus       217 ~~~~~~~l~~~cl~~~p~~Rpt~~e  241 (241)
                      .+..+.+++.+||+.||++|||+.|
T Consensus       268 ~~~~~~~li~~~L~~dP~~Rps~~e  292 (434)
T 2rio_A          268 LIAEATDLISQMIDHDPLKRPTAMK  292 (434)
T ss_dssp             HHHHHHHHHHHHTCSSGGGSCCHHH
T ss_pred             chHHHHHHHHHHhhCChhhCCCHHH
Confidence            5678999999999999999999853


No 220
>3fme_A Dual specificity mitogen-activated protein kinase; active mutant, structural genomics consortium, SCG, binding, nucleotide-binding, phosphoprotein; HET: STU; 2.26A {Homo sapiens} PDB: 3enm_A
Probab=100.00  E-value=1.6e-37  Score=248.77  Aligned_cols=213  Identities=21%  Similarity=0.257  Sum_probs=146.1

Q ss_pred             CcccccccccccHHH-HHHHHHHHHhcCCCcccceeeeeeeCCcceEEEEecCCCCHHHhhcC----C-Cc---hHHHHH
Q 044022            1 MKFYGHEYHRHTYGS-CINNITYAAQMSHNHILKRIGCCLQTPIPILVFQSVEYGTLRDCIFG----A-PL---PRLKIA   71 (241)
Q Consensus         1 iK~~~~~~~~~~~~~-~~~e~~~l~~l~h~~iv~~~~~~~~~~~~~lv~e~~~~~sL~~~l~~----~-~~---~~~~~~   71 (241)
                      ||++..........+ +.++...++.++||||+++++++..++..++||||++ |+|.+++..    . ..   ....++
T Consensus        37 vK~~~~~~~~~~~~~~~~~~~~~~~~~~h~~iv~~~~~~~~~~~~~lv~e~~~-~~l~~~l~~~~~~~~~~~~~~~~~i~  115 (290)
T 3fme_A           37 VKRIRATVNSQEQKRLLMDLDISMRTVDCPFTVTFYGALFREGDVWICMELMD-TSLDKFYKQVIDKGQTIPEDILGKIA  115 (290)
T ss_dssp             EEEEC---CHHHHHHHHHHHHHHHTTCCCTTBCCEEEEEECSSSEEEEEECCS-EEHHHHHHHHHHTTCCCCHHHHHHHH
T ss_pred             EEEeecccCcHHHHHHHHHHHHHHHhCCCCeEEEEeeeeeccCCEEEEEehhc-cchHHHHHHHHhcCCCCCHHHHHHHH
Confidence            355544333333333 4445555788899999999999999999999999997 588777643    1 11   467899


Q ss_pred             HHHHHHhchhhcCCCC-CceeccCCCCCeeecCCCCeEEeeccCceecCCCCcceeecccccCCCccCcccc----cccC
Q 044022           72 SDIVNSLAYLHFGFPR-PIVLRNFKTQNILFNEENVAKWFDFLLSISIPEGETHITTDRVIGTRGYSAPEYI----SICV  146 (241)
Q Consensus        72 ~~i~~~l~~lh~~~~~-~ivh~dl~~~nil~~~~~~~~l~df~~~~~~~~~~~~~~~~~~~~~~~~~aPE~~----~~~~  146 (241)
                      .|++.||.|||   +. +++||||||+||+++.++.++|+|||.+........   .....+++.|+|||.+    ....
T Consensus       116 ~qi~~~l~~lH---~~~~i~H~dlkp~Nil~~~~~~~kl~Dfg~~~~~~~~~~---~~~~~~t~~y~aPE~~~~~~~~~~  189 (290)
T 3fme_A          116 VSIVKALEHLH---SKLSVIHRDVKPSNVLINALGQVKMCDFGISGYLVDDVA---KDIDAGCKPYMAPERINPELNQKG  189 (290)
T ss_dssp             HHHHHHHHHHH---HHSCCCCCCCSGGGCEECTTCCEEBCCC------------------CCCCCCSCHHHHSCCTTC--
T ss_pred             HHHHHHHHHHh---hcCCeecCCCCHHHEEECCCCCEEEeecCCccccccccc---ccccCCCccccChhhcChhhcCcC
Confidence            99999999999   77 999999999999999999999999999876544322   1234689999999996    4567


Q ss_pred             CCcchhhHHHHHHHHHHHhcCcccccccccCCCcccchHHHHHHHhhhcccCCCCCCccccCCCchhHHHHHHHHHHHHH
Q 044022          147 LNEKSNVFSFGAFLFELLAGRIHIWDLLKDTHDHGCFFNEYLKNYLEDKRFTGIPAPIIVQDIPCIEKEQQLHASAQLTL  226 (241)
Q Consensus       147 ~~~~~Di~s~G~~~~~~~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~  226 (241)
                      ++.++||||||+++|+|++|+.||....       ... ........... .....    .        ..+..+.+++.
T Consensus       190 ~~~~~Di~slG~il~~l~~g~~p~~~~~-------~~~-~~~~~~~~~~~-~~~~~----~--------~~~~~~~~li~  248 (290)
T 3fme_A          190 YSVKSDIWSLGITMIELAILRFPYDSWG-------TPF-QQLKQVVEEPS-PQLPA----D--------KFSAEFVDFTS  248 (290)
T ss_dssp             CCHHHHHHHHHHHHHHHHHTSCSSCCCS-------CHH-HHHHHHHHSCC-CCCCT----T--------TSCHHHHHHHH
T ss_pred             CCcHHHHHHHHHHHHHHHHCCCCccccC-------chH-HHHHHHhccCC-CCccc----c--------cCCHHHHHHHH
Confidence            8899999999999999999999995411       111 11111111111 11110    1        12257899999


Q ss_pred             HhccCCCCCCCCCCC
Q 044022          227 ECVNNSPEDRPTMVD  241 (241)
Q Consensus       227 ~cl~~~p~~Rpt~~e  241 (241)
                      +||+.||++|||++|
T Consensus       249 ~~l~~~p~~Rpt~~e  263 (290)
T 3fme_A          249 QCLKKNSKERPTYPE  263 (290)
T ss_dssp             HHTCSSGGGSCCHHH
T ss_pred             HHhhcChhhCcCHHH
Confidence            999999999999853


No 221
>2y4i_B KSR2, HKSR2, kinase suppressor of RAS 2; transferase, KSR1; HET: ATP; 3.46A {Homo sapiens}
Probab=100.00  E-value=6.8e-38  Score=254.23  Aligned_cols=205  Identities=19%  Similarity=0.239  Sum_probs=154.3

Q ss_pred             ccHHHHHHHHHHHHhcCCCcccceeeeeeeCCcceEEEEecCCCCHHHhhcCCC-----chHHHHHHHHHHHhchhhcCC
Q 044022           11 HTYGSCINNITYAAQMSHNHILKRIGCCLQTPIPILVFQSVEYGTLRDCIFGAP-----LPRLKIASDIVNSLAYLHFGF   85 (241)
Q Consensus        11 ~~~~~~~~e~~~l~~l~h~~iv~~~~~~~~~~~~~lv~e~~~~~sL~~~l~~~~-----~~~~~~~~~i~~~l~~lh~~~   85 (241)
                      ...+.+.+|+.++++++||||+++++++...+..++|+||+++++|.+++....     .....++.+++.||.|||   
T Consensus        71 ~~~~~~~~e~~~l~~l~h~~iv~~~~~~~~~~~~~iv~e~~~~~~L~~~l~~~~~~~~~~~~~~i~~qi~~al~~lH---  147 (319)
T 2y4i_B           71 DQLKAFKREVMAYRQTRHENVVLFMGACMSPPHLAIITSLCKGRTLYSVVRDAKIVLDVNKTRQIAQEIVKGMGYLH---  147 (319)
T ss_dssp             CCCCCCCTTGGGGTTCCCTTBCCCCEEEECSSCEEEECBCCCSEEHHHHTTSSCCCCCSHHHHHHHHHHHHHHHHHH---
T ss_pred             HHHHHHHHHHHHHhcCCCCCEeEEEEEEecCCceEEEeecccCCcHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHH---
Confidence            345668899999999999999999999999999999999999999999997653     257889999999999999   


Q ss_pred             CCCceeccCCCCCeeecCCCCeEEeeccCceecCCCC---cceeecccccCCCccCcccccc---------cCCCcchhh
Q 044022           86 PRPIVLRNFKTQNILFNEENVAKWFDFLLSISIPEGE---THITTDRVIGTRGYSAPEYISI---------CVLNEKSNV  153 (241)
Q Consensus        86 ~~~ivh~dl~~~nil~~~~~~~~l~df~~~~~~~~~~---~~~~~~~~~~~~~~~aPE~~~~---------~~~~~~~Di  153 (241)
                      +.+++|+||||+||+++ ++.++|+|||++.......   .........|++.|+|||.+..         ..++.++||
T Consensus       148 ~~~i~H~dlkp~NIl~~-~~~~~l~Dfg~~~~~~~~~~~~~~~~~~~~~g~~~y~aPE~~~~~~~~~~~~~~~~~~~~Di  226 (319)
T 2y4i_B          148 AKGILHKDLKSKNVFYD-NGKVVITDFGLFSISGVLQAGRREDKLRIQNGWLCHLAPEIIRQLSPDTEEDKLPFSKHSDV  226 (319)
T ss_dssp             HTTCCCCCCCSTTEEEC---CCEECCCSCCC----------CCSCBCCSGGGGTSCHHHHSCBSCC--CCCSCCCHHHHH
T ss_pred             hCCccccCCChhhEEEe-CCCEEEeecCCccccccccccccccccccCCCcccccChHHhhhccccccccccCCCchhhH
Confidence            89999999999999998 6899999999876543211   1111223458889999999874         347889999


Q ss_pred             HHHHHHHHHHHhcCcccccccccCCCcccchHHHHHHHhhhcccCCCCCCccccCCCchhHHHHHHHHHHHHHHhccCCC
Q 044022          154 FSFGAFLFELLAGRIHIWDLLKDTHDHGCFFNEYLKNYLEDKRFTGIPAPIIVQDIPCIEKEQQLHASAQLTLECVNNSP  233 (241)
Q Consensus       154 ~s~G~~~~~~~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~cl~~~p  233 (241)
                      ||||+++|+|++|..||....         ......... .+.......    ...+        ..+.+++.+||+.||
T Consensus       227 ~slG~il~el~~g~~p~~~~~---------~~~~~~~~~-~~~~~~~~~----~~~~--------~~l~~li~~~l~~~p  284 (319)
T 2y4i_B          227 FALGTIWYELHAREWPFKTQP---------AEAIIWQMG-TGMKPNLSQ----IGMG--------KEISDILLFCWAFEQ  284 (319)
T ss_dssp             HHHHHHHHHHHHSSCSSSSCC---------HHHHHHHHH-TTCCCCCCC----SSCC--------TTHHHHHHHHHCSST
T ss_pred             HHHHHHHHHHHhCCCCCCCCC---------HHHHHHHhc-cCCCCCCCc----CCCC--------HHHHHHHHHHhcCCh
Confidence            999999999999999996421         111222211 111111111    1111        458899999999999


Q ss_pred             CCCCCCCC
Q 044022          234 EDRPTMVD  241 (241)
Q Consensus       234 ~~Rpt~~e  241 (241)
                      ++|||++|
T Consensus       285 ~~Rpt~~~  292 (319)
T 2y4i_B          285 EERPTFTK  292 (319)
T ss_dssp             TTSCCHHH
T ss_pred             hhCcCHHH
Confidence            99999753


No 222
>3kvw_A DYRK2, dual specificity tyrosine-phosphorylation-regulat 2; KI-(Y)-phosphorylation REG kinase 2, PSK-H2, kinase, structural genomics consortium; HET: SEP PTR IRB; 2.28A {Homo sapiens} PDB: 3k2l_A* 4azf_A*
Probab=100.00  E-value=1.3e-37  Score=262.54  Aligned_cols=152  Identities=22%  Similarity=0.215  Sum_probs=132.5

Q ss_pred             cHHHHHHHHHHHHhc------CCCcccceeeeeeeCCcceEEEEecCCCCHHHhhcCCC---c---hHHHHHHHHHHHhc
Q 044022           12 TYGSCINNITYAAQM------SHNHILKRIGCCLQTPIPILVFQSVEYGTLRDCIFGAP---L---PRLKIASDIVNSLA   79 (241)
Q Consensus        12 ~~~~~~~e~~~l~~l------~h~~iv~~~~~~~~~~~~~lv~e~~~~~sL~~~l~~~~---~---~~~~~~~~i~~~l~   79 (241)
                      ...++.+|+++++.+      .|+||+++++++...+..++||||+. ++|.+++....   .   .+..++.||+.||.
T Consensus       136 ~~~~~~~E~~~l~~l~~~~~~~~~~iv~~~~~~~~~~~~~lv~e~~~-~~L~~~l~~~~~~~~~~~~~~~i~~qi~~aL~  214 (429)
T 3kvw_A          136 FHRQAAEEIRILEHLRKQDKDNTMNVIHMLENFTFRNHICMTFELLS-MNLYELIKKNKFQGFSLPLVRKFAHSILQCLD  214 (429)
T ss_dssp             HHHHHHHHHHHHHHHHTTCTTSCSCBCCEEEEEEETTEEEEEECCCC-CBHHHHHHHTTTCCCCHHHHHHHHHHHHHHHH
T ss_pred             hHHHHHHHHHHHHHHhhccccCCcCEEEEEeecccCCeEEEEEeccC-CCHHHHHHhccCCCCCHHHHHHHHHHHHHHHH
Confidence            356778899999888      56799999999999999999999996 69999886542   1   46789999999999


Q ss_pred             hhhcCCCCCceeccCCCCCeeecCCCC--eEEeeccCceecCCCCcceeecccccCCCccCcccccccCCCcchhhHHHH
Q 044022           80 YLHFGFPRPIVLRNFKTQNILFNEENV--AKWFDFLLSISIPEGETHITTDRVIGTRGYSAPEYISICVLNEKSNVFSFG  157 (241)
Q Consensus        80 ~lh~~~~~~ivh~dl~~~nil~~~~~~--~~l~df~~~~~~~~~~~~~~~~~~~~~~~~~aPE~~~~~~~~~~~Di~s~G  157 (241)
                      |||   +.+|+||||||+|||++.++.  +||+|||++.......     ....+|+.|+|||++.+..++.++||||||
T Consensus       215 ~LH---~~~ivHrDlKp~NILl~~~~~~~vkL~DFG~a~~~~~~~-----~~~~gt~~y~aPE~~~~~~~~~~~DiwSlG  286 (429)
T 3kvw_A          215 ALH---KNRIIHCDLKPENILLKQQGRSGIKVIDFGSSCYEHQRV-----YTYIQSRFYRAPEVILGARYGMPIDMWSLG  286 (429)
T ss_dssp             HHH---HHTEECSCCSGGGEEESSTTSCCEEECCCTTCEETTCCC-----CSSCSCGGGCCHHHHHTBCCCTHHHHHHHH
T ss_pred             HHH---HCCeecCCCCHHHeEEccCCCcceEEeecccceecCCcc-----cccCCCCCccChHHHhCCCCCchHHHHhHH
Confidence            999   899999999999999999887  9999999997654332     334689999999999999999999999999


Q ss_pred             HHHHHHHhcCccccc
Q 044022          158 AFLFELLAGRIHIWD  172 (241)
Q Consensus       158 ~~~~~~~~g~~p~~~  172 (241)
                      |++|+|++|..||..
T Consensus       287 ~il~elltG~~pf~~  301 (429)
T 3kvw_A          287 CILAELLTGYPLLPG  301 (429)
T ss_dssp             HHHHHHHHSSCSSCC
T ss_pred             HHHHHHHhCCCCCCC
Confidence            999999999999954


No 223
>3an0_A Dual specificity mitogen-activated protein kinase; auto inhibition state, activation helix, serine/threonine-PR kinase; HET: ANK; 2.60A {Homo sapiens} PDB: 3vn9_A*
Probab=100.00  E-value=1.2e-37  Score=255.21  Aligned_cols=213  Identities=20%  Similarity=0.246  Sum_probs=158.9

Q ss_pred             CcccccccccccHHHHHHHHHH-HHhcCCCcccceeeeeeeCCcceEEEEecCCCCHHHhhcC----C-Cc---hHHHHH
Q 044022            1 MKFYGHEYHRHTYGSCINNITY-AAQMSHNHILKRIGCCLQTPIPILVFQSVEYGTLRDCIFG----A-PL---PRLKIA   71 (241)
Q Consensus         1 iK~~~~~~~~~~~~~~~~e~~~-l~~l~h~~iv~~~~~~~~~~~~~lv~e~~~~~sL~~~l~~----~-~~---~~~~~~   71 (241)
                      ||++..........++..|+.+ ++.++||||+++++++...+..++||||+. ++|.+++..    . ..   ....++
T Consensus        81 vK~~~~~~~~~~~~~~~~e~~~~~~~~~h~~iv~~~~~~~~~~~~~lv~e~~~-~~L~~~l~~~~~~~~~l~~~~~~~i~  159 (340)
T 3an0_A           81 VKRIRATVNSQEQKRLLMDLDISMRTVDCPFTVTFYGALFREGDVWICMELMD-TSLDKFYKQVIDKGQTIPEDILGKIA  159 (340)
T ss_dssp             EEEECSCCCCHHHHHHHHHHHHHHTTCCCTTTCCEEEEEECSSCEEEEECCCS-EEHHHHHHHHHHTSCCCCHHHHHHHH
T ss_pred             EEEeccccCcHHHHHHHHHHHHHHhhcCCCcEEEEeeEEEeCCcEEEEHHHhh-CcHHHHHHHHHhcCCCCCHHHHHHHH
Confidence            4555544444455666777666 677899999999999999999999999997 599888752    1 22   467899


Q ss_pred             HHHHHHhchhhcCCCC-CceeccCCCCCeeecCCCCeEEeeccCceecCCCCcceeecccccCCCccCccccc----ccC
Q 044022           72 SDIVNSLAYLHFGFPR-PIVLRNFKTQNILFNEENVAKWFDFLLSISIPEGETHITTDRVIGTRGYSAPEYIS----ICV  146 (241)
Q Consensus        72 ~~i~~~l~~lh~~~~~-~ivh~dl~~~nil~~~~~~~~l~df~~~~~~~~~~~~~~~~~~~~~~~~~aPE~~~----~~~  146 (241)
                      .||+.||.|||   +. +++||||||+||+++.++.+||+|||++........   .....|++.|+|||++.    ...
T Consensus       160 ~qi~~~l~~lH---~~~~ivH~Dlkp~NIl~~~~~~~kl~Dfg~~~~~~~~~~---~~~~~gt~~y~aPE~~~~~~~~~~  233 (340)
T 3an0_A          160 VSIVKALEHLH---SKLSVIHRDVKPSNVLINALGQVKMCDFGISGYLVDSVA---KTIDAGCKPYMAPERINPELNQKG  233 (340)
T ss_dssp             HHHHHHHHHHH---HHTCCCCCSCCSTTEEECSTTCEEECCCSHHHHHSCHHH---HHHSSCCCCCCCHHHHSCCTTCCS
T ss_pred             HHHHHHHHHHh---hcCCeecCCCCHHHEEECCCCCEEEeeCCCceecccccc---cccCCCCccccCccccccccccCC
Confidence            99999999999   76 999999999999999999999999999876543211   12246899999999964    346


Q ss_pred             CCcchhhHHHHHHHHHHHhcCcccccccccCCCcccchHHHHHHHhhhcccCCCCCCccccCCCchhHHHHHHHHHHHHH
Q 044022          147 LNEKSNVFSFGAFLFELLAGRIHIWDLLKDTHDHGCFFNEYLKNYLEDKRFTGIPAPIIVQDIPCIEKEQQLHASAQLTL  226 (241)
Q Consensus       147 ~~~~~Di~s~G~~~~~~~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~  226 (241)
                      ++.++||||||+++|+|++|+.||.....       . ............ ....    ..        ..+..+.+++.
T Consensus       234 ~~~~~Di~slG~il~el~tg~~p~~~~~~-------~-~~~~~~~~~~~~-~~~~----~~--------~~~~~~~~li~  292 (340)
T 3an0_A          234 YSVKSDIWSLGITMIELAILRFPYDSWGT-------P-FQQLKQVVEEPS-PQLP----AD--------KFSAEFVDFTS  292 (340)
T ss_dssp             CCHHHHHHHHHHHHHHHHHTSCSSCCCSC-------H-HHHHHHHHHSCC-CCCC----GG--------GSCHHHHHHHH
T ss_pred             CCchhhHHHHHHHHHHHHHCCCCCccccc-------h-HHHHHHHhcCCC-CCCC----cc--------cCCHHHHHHHH
Confidence            88999999999999999999999964111       1 111111111111 0000    01        12367899999


Q ss_pred             HhccCCCCCCCCCCC
Q 044022          227 ECVNNSPEDRPTMVD  241 (241)
Q Consensus       227 ~cl~~~p~~Rpt~~e  241 (241)
                      +||+.||++|||+.|
T Consensus       293 ~~l~~dp~~Rps~~e  307 (340)
T 3an0_A          293 QCLKKNSKERPTYPE  307 (340)
T ss_dssp             HHTCSSGGGSCCHHH
T ss_pred             HHccCCcccCcCHHH
Confidence            999999999999753


No 224
>3cek_A Dual specificity protein kinase TTK; HMPS1, PYT, ESK, phosphotyros picked threonine kinase, SGC, structural genomics consortiu binding; HET: 7PE; 2.30A {Homo sapiens} PDB: 3gfw_A* 3h9f_A* 2x9e_A* 3hmp_A* 3hmn_A* 3hmo_A*
Probab=100.00  E-value=2.9e-37  Score=250.09  Aligned_cols=214  Identities=18%  Similarity=0.295  Sum_probs=154.9

Q ss_pred             cccccc-cccccHHHHHHHHHHHHhcC--CCcccceeeeeeeCCcceEEEEecCCCCHHHhhcCCCc----hHHHHHHHH
Q 044022            2 KFYGHE-YHRHTYGSCINNITYAAQMS--HNHILKRIGCCLQTPIPILVFQSVEYGTLRDCIFGAPL----PRLKIASDI   74 (241)
Q Consensus         2 K~~~~~-~~~~~~~~~~~e~~~l~~l~--h~~iv~~~~~~~~~~~~~lv~e~~~~~sL~~~l~~~~~----~~~~~~~~i   74 (241)
                      |++..+ ......+.+.+|++++++++  |+||+++++++...+..++||| +.+++|.+++.....    .+..++.++
T Consensus        58 K~~~~~~~~~~~~~~~~~E~~~l~~l~~~~~~iv~~~~~~~~~~~~~lv~e-~~~~~L~~~l~~~~~~~~~~~~~i~~qi  136 (313)
T 3cek_A           58 KYVNLEEADNQTLDSYRNEIAYLNKLQQHSDKIIRLYDYEITDQYIYMVME-CGNIDLNSWLKKKKSIDPWERKSYWKNM  136 (313)
T ss_dssp             EEEECSSCCHHHHHHHHHHHHHHHHHGGGCTTBCCEEEEEECSSEEEEEEC-CCSEEHHHHHHHCSSCCHHHHHHHHHHH
T ss_pred             EEeccccccccchHHHHHHHHHHHhccccCCceEEEEEEeecCCEEEEEEe-cCCCcHHHHHHhcCCCCHHHHHHHHHHH
Confidence            444432 23345678999999999997  5999999999999999999999 557899999865432    567899999


Q ss_pred             HHHhchhhcCCCCCceeccCCCCCeeecCCCCeEEeeccCceecCCCCcceeecccccCCCccCcccccc----------
Q 044022           75 VNSLAYLHFGFPRPIVLRNFKTQNILFNEENVAKWFDFLLSISIPEGETHITTDRVIGTRGYSAPEYISI----------  144 (241)
Q Consensus        75 ~~~l~~lh~~~~~~ivh~dl~~~nil~~~~~~~~l~df~~~~~~~~~~~~~~~~~~~~~~~~~aPE~~~~----------  144 (241)
                      +.||.|||   +.+++|+||||+||+++. +.+||+|||.+................|++.|+|||.+.+          
T Consensus       137 ~~aL~~LH---~~~ivH~dlkp~NIl~~~-~~~kL~Dfg~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~  212 (313)
T 3cek_A          137 LEAVHTIH---QHGIVHSDLKPANFLIVD-GMLKLIDFGIANQMQPDTTSVVKDSQVGTVNYMPPEAIKDMSSSRENGKS  212 (313)
T ss_dssp             HHHHHHHH---HTTCCCCCCCGGGEEEET-TEEEECCCSSSCC--------------CCGGGCCHHHHTTCC--------
T ss_pred             HHHHHHHH---HCCceecCCCcccEEEEC-CeEEEeeccccccccCccccccccCCCCCCCcCCHHHHhhcccccccccc
Confidence            99999999   899999999999999964 8999999999976654333222234568999999999875          


Q ss_pred             -cCCCcchhhHHHHHHHHHHHhcCcccccccccCCCcccchHHHHHHHhhhcccCCCCCCccccCCCchhHHHHHHHHHH
Q 044022          145 -CVLNEKSNVFSFGAFLFELLAGRIHIWDLLKDTHDHGCFFNEYLKNYLEDKRFTGIPAPIIVQDIPCIEKEQQLHASAQ  223 (241)
Q Consensus       145 -~~~~~~~Di~s~G~~~~~~~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  223 (241)
                       ..++.++||||||+++|+|++|..||......        ...............     .....        +..+.+
T Consensus       213 ~~~~~~~~Di~slG~il~el~~g~~pf~~~~~~--------~~~~~~~~~~~~~~~-----~~~~~--------~~~l~~  271 (313)
T 3cek_A          213 KSKISPKSDVWSLGCILYYMTYGKTPFQQIINQ--------ISKLHAIIDPNHEIE-----FPDIP--------EKDLQD  271 (313)
T ss_dssp             --CCCHHHHHHHHHHHHHHHHHSSCTTTTCCSH--------HHHHHHHHCTTSCCC-----CCCCS--------CHHHHH
T ss_pred             cccCCchHHHHHHHHHHHHHHhCCCchhhHHHH--------HHHHHHHHhcccccC-----Ccccc--------hHHHHH
Confidence             46788999999999999999999999642111        111111111111111     11111        256889


Q ss_pred             HHHHhccCCCCCCCCCCC
Q 044022          224 LTLECVNNSPEDRPTMVD  241 (241)
Q Consensus       224 l~~~cl~~~p~~Rpt~~e  241 (241)
                      ++.+||+.||++|||++|
T Consensus       272 li~~~l~~dp~~Rps~~e  289 (313)
T 3cek_A          272 VLKCCLKRDPKQRISIPE  289 (313)
T ss_dssp             HHHHHTCSSTTTSCCHHH
T ss_pred             HHHHHccCCcccCcCHHH
Confidence            999999999999999853


No 225
>1zy4_A Serine/threonine-protein kinase GCN2; translation regulator, signal transduction, acid starvation, starvation stress response; 1.95A {Saccharomyces cerevisiae} PDB: 1zy5_A* 1zyd_A* 1zyc_A* 1zxe_A
Probab=100.00  E-value=4.4e-37  Score=247.30  Aligned_cols=205  Identities=21%  Similarity=0.310  Sum_probs=148.7

Q ss_pred             cHHHHHHHHHHHHhcCCCcccceeeeeee-------------CCcceEEEEecCCCCHHHhhcCCCc-----hHHHHHHH
Q 044022           12 TYGSCINNITYAAQMSHNHILKRIGCCLQ-------------TPIPILVFQSVEYGTLRDCIFGAPL-----PRLKIASD   73 (241)
Q Consensus        12 ~~~~~~~e~~~l~~l~h~~iv~~~~~~~~-------------~~~~~lv~e~~~~~sL~~~l~~~~~-----~~~~~~~~   73 (241)
                      ..+.+.+|++++++++||||+++++++..             .+..++||||+++++|.+++.....     ....++.+
T Consensus        45 ~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~i~~q  124 (303)
T 1zy4_A           45 KLSTILSEVMLLASLNHQYVVRYYAAWLERRNFVKPMTAVKKKSTLFIQMEYCENGTLYDLIHSENLNQQRDEYWRLFRQ  124 (303)
T ss_dssp             HHHHHHHHHHHHTTCCCTTBCCEEEEEEECCCCCC------CEEEEEEEEECCCSCBHHHHHHHSCGGGCHHHHHHHHHH
T ss_pred             HHHHHHHHHHHHHhcCchHHHHHHHHHHhhcchhhhhcccccCCceEEEEecCCCCCHHHhhhccccccchHHHHHHHHH
Confidence            45778999999999999999999998865             3467999999999999999975432     45688999


Q ss_pred             HHHHhchhhcCCCCCceeccCCCCCeeecCCCCeEEeeccCceecCCCCc------------ceeecccccCCCccCccc
Q 044022           74 IVNSLAYLHFGFPRPIVLRNFKTQNILFNEENVAKWFDFLLSISIPEGET------------HITTDRVIGTRGYSAPEY  141 (241)
Q Consensus        74 i~~~l~~lh~~~~~~ivh~dl~~~nil~~~~~~~~l~df~~~~~~~~~~~------------~~~~~~~~~~~~~~aPE~  141 (241)
                      ++.||.|||   +.+++|+||||+||+++.++.++|+|||.+........            ........+++.|+|||.
T Consensus       125 i~~~l~~LH---~~~i~H~dlkp~Nil~~~~~~~kl~dfg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~y~aPE~  201 (303)
T 1zy4_A          125 ILEALSYIH---SQGIIHRDLKPMNIFIDESRNVKIGDFGLAKNVHRSLDILKLDSQNLPGSSDNLTSAIGTAMYVATEV  201 (303)
T ss_dssp             HHHHHHHHH---HTTCCCSCCCGGGEEECTTSCEEECCCCCCSCTTC-------------------------CTTSCHHH
T ss_pred             HHHHHHHHH---hCCeecccCCHHhEEEcCCCCEEEeeCcchhhcccccchhccccccccccccccccCCCcccccCccc
Confidence            999999999   89999999999999999999999999999876542210            111233468899999999


Q ss_pred             cccc-CCCcchhhHHHHHHHHHHHhcCcccccccccCCCcccchHHHHHHHhhhcccCCCCCCccccCCCchhHHHHHHH
Q 044022          142 ISIC-VLNEKSNVFSFGAFLFELLAGRIHIWDLLKDTHDHGCFFNEYLKNYLEDKRFTGIPAPIIVQDIPCIEKEQQLHA  220 (241)
Q Consensus       142 ~~~~-~~~~~~Di~s~G~~~~~~~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  220 (241)
                      +.+. .++.++||||||+++|+|++   ||....        ...+...... ...  ....+....        ..+..
T Consensus       202 ~~~~~~~~~~~Di~slG~il~~l~~---p~~~~~--------~~~~~~~~~~-~~~--~~~~~~~~~--------~~~~~  259 (303)
T 1zy4_A          202 LDGTGHYNEKIDMYSLGIIFFEMIY---PFSTGM--------ERVNILKKLR-SVS--IEFPPDFDD--------NKMKV  259 (303)
T ss_dssp             HTSCSCCCTHHHHHHHHHHHHHHHS---CCSSHH--------HHHHHHHHHH-STT--CCCCTTCCT--------TTSHH
T ss_pred             ccCCCCCcchhhHHHHHHHHHHHHh---ccCCch--------hHHHHHHhcc-ccc--cccCccccc--------cchHH
Confidence            9764 68899999999999999998   443210        0111111111 110  011111111        22356


Q ss_pred             HHHHHHHhccCCCCCCCCCCC
Q 044022          221 SAQLTLECVNNSPEDRPTMVD  241 (241)
Q Consensus       221 ~~~l~~~cl~~~p~~Rpt~~e  241 (241)
                      +.+++.+||+.||++|||++|
T Consensus       260 ~~~li~~~l~~dp~~Rps~~~  280 (303)
T 1zy4_A          260 EKKIIRLLIDHDPNKRPGART  280 (303)
T ss_dssp             HHHHHHHHTCSSGGGSCCHHH
T ss_pred             HHHHHHHHHhcCcccCcCHHH
Confidence            889999999999999999753


No 226
>3coi_A Mitogen-activated protein kinase 13; P38D, P38delta, ERK, MAP kinase, PMK, STK26, stress-activated protein kinase, structural genomics, PSI; 2.09A {Homo sapiens}
Probab=100.00  E-value=1.3e-36  Score=250.34  Aligned_cols=163  Identities=20%  Similarity=0.259  Sum_probs=132.9

Q ss_pred             Ccccccccc-cccHHHHHHHHHHHHhcCCCcccceeeeeeeCCc------ceEEEEecCCCCHHHhhcCCC--chHHHHH
Q 044022            1 MKFYGHEYH-RHTYGSCINNITYAAQMSHNHILKRIGCCLQTPI------PILVFQSVEYGTLRDCIFGAP--LPRLKIA   71 (241)
Q Consensus         1 iK~~~~~~~-~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~~~~~------~~lv~e~~~~~sL~~~l~~~~--~~~~~~~   71 (241)
                      ||.+..... ....+++.+|+.++++++||||+++++++...+.      .++||||+. ++|.+++...-  .....++
T Consensus        54 iK~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~~~~~~~lv~e~~~-~~l~~~~~~~~~~~~~~~i~  132 (353)
T 3coi_A           54 IKKLSRPFQSEIFAKRAYRELLLLKHMQHENVIGLLDVFTPASSLRNFYDFYLVMPFMQ-TDLQKIMGLKFSEEKIQYLV  132 (353)
T ss_dssp             EEEESSTTSSHHHHHHHHHHHHHHHHCCCTTBCCCSEEECSCSSGGGCCCCEEEEECCS-EEGGGTTTSCCCHHHHHHHH
T ss_pred             EEEecccccchHHHHHHHHHHHHHHhcCCCCcccHhheEecccccccceeEEEEecccc-CCHHHHhcCCCCHHHHHHHH
Confidence            355443322 2345678999999999999999999999987653      499999997 69988876542  2567899


Q ss_pred             HHHHHHhchhhcCCCCCceeccCCCCCeeecCCCCeEEeeccCceecCCCCcceeecccccCCCccCcccccc-cCCCcc
Q 044022           72 SDIVNSLAYLHFGFPRPIVLRNFKTQNILFNEENVAKWFDFLLSISIPEGETHITTDRVIGTRGYSAPEYISI-CVLNEK  150 (241)
Q Consensus        72 ~~i~~~l~~lh~~~~~~ivh~dl~~~nil~~~~~~~~l~df~~~~~~~~~~~~~~~~~~~~~~~~~aPE~~~~-~~~~~~  150 (241)
                      .+++.||.|||   +.+++||||||+||+++.++.++|+|||.+.......     ....+++.|+|||++.+ ..++.+
T Consensus       133 ~qi~~al~~LH---~~~ivH~dlkp~NIl~~~~~~~kl~Dfg~~~~~~~~~-----~~~~~t~~y~aPE~~~~~~~~~~~  204 (353)
T 3coi_A          133 YQMLKGLKYIH---SAGVVHRDLKPGNLAVNEDCELKILDFGLARHADAEM-----TGYVVTRWYRAPEVILSWMHYNQT  204 (353)
T ss_dssp             HHHHHHHHHHH---HTTCCCSSCCGGGEEECTTCCEEECSTTCTTC-------------CCSBCCSCHHHHSCCSCCCTT
T ss_pred             HHHHHHHHHHH---HCCcccCCCCHHHEeECCCCcEEEeecccccCCCCCc-----cccccCcCcCCHHHHhCcCCCCch
Confidence            99999999999   8999999999999999999999999999987543321     23467899999999877 678899


Q ss_pred             hhhHHHHHHHHHHHhcCccccc
Q 044022          151 SNVFSFGAFLFELLAGRIHIWD  172 (241)
Q Consensus       151 ~Di~s~G~~~~~~~~g~~p~~~  172 (241)
                      +||||||+++|+|++|..||..
T Consensus       205 ~Di~slG~il~el~~g~~pf~~  226 (353)
T 3coi_A          205 VDIWSVGCIMAEMLTGKTLFKG  226 (353)
T ss_dssp             HHHHHHHHHHHHHHHSSCSSBS
T ss_pred             hhHHHHHHHHHHHHhCCCCCCC
Confidence            9999999999999999999965


No 227
>2buj_A Serine/threonine-protein kinase 16; transferase, ATP-binding, lipoprotein, myristate, PA phosphorylation; HET: STU; 2.6A {Homo sapiens}
Probab=100.00  E-value=6.9e-38  Score=254.05  Aligned_cols=207  Identities=20%  Similarity=0.218  Sum_probs=155.1

Q ss_pred             ccHHHHHHHHHHHHhcCCCcccceeeeeee----CCcceEEEEecCCCCHHHhhcC-----CC---chHHHHHHHHHHHh
Q 044022           11 HTYGSCINNITYAAQMSHNHILKRIGCCLQ----TPIPILVFQSVEYGTLRDCIFG-----AP---LPRLKIASDIVNSL   78 (241)
Q Consensus        11 ~~~~~~~~e~~~l~~l~h~~iv~~~~~~~~----~~~~~lv~e~~~~~sL~~~l~~-----~~---~~~~~~~~~i~~~l   78 (241)
                      ...+.+.+|++++++++||||+++++++..    ....++|+||+++++|.+++..     ..   ..+..++.|++.||
T Consensus        68 ~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~i~~qi~~~L  147 (317)
T 2buj_A           68 QDREEAQREADMHRLFNHPNILRLVAYCLRERGAKHEAWLLLPFFKRGTLWNEIERLKDKGNFLTEDQILWLLLGICRGL  147 (317)
T ss_dssp             HHHHHHHHHHHHHHTCCCTTBCCCCEEEEEEETTEEEEEEEEECCTTCBHHHHHHHHHTTTCCCCHHHHHHHHHHHHHHH
T ss_pred             HHHHHHHHHHHHHhhcCCCCeeeEEEEEEeccCCCceeEEEEEeCCCCcHHHHHHHHHhcCCCCCHHHHHHHHHHHHHHH
Confidence            456778999999999999999999999973    3478999999999999998864     11   14678999999999


Q ss_pred             chhhcCCCCCceeccCCCCCeeecCCCCeEEeeccCceecCCCCcc-------eeecccccCCCccCcccccccC---CC
Q 044022           79 AYLHFGFPRPIVLRNFKTQNILFNEENVAKWFDFLLSISIPEGETH-------ITTDRVIGTRGYSAPEYISICV---LN  148 (241)
Q Consensus        79 ~~lh~~~~~~ivh~dl~~~nil~~~~~~~~l~df~~~~~~~~~~~~-------~~~~~~~~~~~~~aPE~~~~~~---~~  148 (241)
                      .|||   +.+++|+||||+||+++.++.++|+|||.+.........       .......|++.|+|||.+.+..   ++
T Consensus       148 ~~LH---~~~ivH~dlkp~NIl~~~~~~~kl~dfg~~~~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~  224 (317)
T 2buj_A          148 EAIH---AKGYAHRDLKPTNILLGDEGQPVLMDLGSMNQACIHVEGSRQALTLQDWAAQRCTISYRAPELFSVQSHCVID  224 (317)
T ss_dssp             HHHH---HTTEECCCCCGGGEEECTTSCEEECCCSSCEESCEEEESHHHHHHHHHHHHHHSCGGGCCGGGSSCCSEEEEC
T ss_pred             HHHH---hCCcccCCCCHHHEEEcCCCCEEEEecCcchhcccccccccccccccccccccCCcccCCHhHhccCCCcCCC
Confidence            9999   899999999999999999999999999988754321110       0011234688999999987543   68


Q ss_pred             cchhhHHHHHHHHHHHhcCcccccccccCCCcccchHHHHHHHhhhcccCCCCCCccccCCCchhHHHHHHHHHHHHHHh
Q 044022          149 EKSNVFSFGAFLFELLAGRIHIWDLLKDTHDHGCFFNEYLKNYLEDKRFTGIPAPIIVQDIPCIEKEQQLHASAQLTLEC  228 (241)
Q Consensus       149 ~~~Di~s~G~~~~~~~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~c  228 (241)
                      .++||||||+++|+|++|+.||.......    ....   .... ..  ...+.   ..        ..+..+.+++.+|
T Consensus       225 ~~~Di~slG~il~el~~g~~p~~~~~~~~----~~~~---~~~~-~~--~~~~~---~~--------~~~~~l~~li~~~  283 (317)
T 2buj_A          225 ERTDVWSLGCVLYAMMFGEGPYDMVFQKG----DSVA---LAVQ-NQ--LSIPQ---SP--------RHSSALWQLLNSM  283 (317)
T ss_dssp             THHHHHHHHHHHHHHHHSSCTTHHHHHTT----SCHH---HHHH-CC----CCC---CT--------TSCHHHHHHHHHH
T ss_pred             chhhHHHHHHHHHHHHhCCCChhhhhccc----chhh---HHhh-cc--CCCCc---cc--------cCCHHHHHHHHHH
Confidence            89999999999999999999995421110    0000   1111 10  00111   01        1225789999999


Q ss_pred             ccCCCCCCCCCCC
Q 044022          229 VNNSPEDRPTMVD  241 (241)
Q Consensus       229 l~~~p~~Rpt~~e  241 (241)
                      |+.||++|||++|
T Consensus       284 l~~dp~~Rps~~~  296 (317)
T 2buj_A          284 MTVDPHQRPHIPL  296 (317)
T ss_dssp             TCSSGGGSCCHHH
T ss_pred             hhcChhhCCCHHH
Confidence            9999999999753


No 228
>1wak_A Serine/threonine-protein kinase SPRK1; SRPK, transferase, alternative splicing, ATP-binding, chromosome partition, differentiation, mRNA processing; 1.73A {Homo sapiens} PDB: 1wbp_A* 3beg_A* 2x7g_A*
Probab=100.00  E-value=6.8e-38  Score=261.27  Aligned_cols=152  Identities=20%  Similarity=0.244  Sum_probs=128.8

Q ss_pred             cHHHHHHHHHHHHhcC--------CCcccceeeeee----eCCcceEEEEecCCCCHHHhhcCCC---c---hHHHHHHH
Q 044022           12 TYGSCINNITYAAQMS--------HNHILKRIGCCL----QTPIPILVFQSVEYGTLRDCIFGAP---L---PRLKIASD   73 (241)
Q Consensus        12 ~~~~~~~e~~~l~~l~--------h~~iv~~~~~~~----~~~~~~lv~e~~~~~sL~~~l~~~~---~---~~~~~~~~   73 (241)
                      ..+.+.+|++++++++        |+||+++++++.    .....++||||+. ++|.+.+....   .   ....++.|
T Consensus        76 ~~~~~~~E~~~l~~l~~~~~~~~~~~~iv~~~~~~~~~~~~~~~~~lv~e~~~-~~l~~~~~~~~~~~~~~~~~~~i~~q  154 (397)
T 1wak_A           76 YTETALDEIRLLKSVRNSDPNDPNREMVVQLLDDFKISGVNGTHICMVFEVLG-HHLLKWIIKSNYQGLPLPCVKKIIQQ  154 (397)
T ss_dssp             HHHHHHHHHHHHHHHHHSCTTCGGGGGBCCEEEEEEEEETTEEEEEEEECCCC-CBHHHHHHHTTTSCCCHHHHHHHHHH
T ss_pred             chHHHHHHHHHHHHHhhcCCCCCCcceeeeeecceeecCCCCceEEEEEeccC-ccHHHHHHhcccCCCCHHHHHHHHHH
Confidence            4567889999999995        788999999998    4557899999995 66666553321   1   46789999


Q ss_pred             HHHHhchhhcCCCC-CceeccCCCCCeeecCCC-----------------------------------------------
Q 044022           74 IVNSLAYLHFGFPR-PIVLRNFKTQNILFNEEN-----------------------------------------------  105 (241)
Q Consensus        74 i~~~l~~lh~~~~~-~ivh~dl~~~nil~~~~~-----------------------------------------------  105 (241)
                      |+.||.|||   ++ +|+||||||+|||++.++                                               
T Consensus       155 i~~aL~~lH---~~~givHrDikp~NIll~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  231 (397)
T 1wak_A          155 VLQGLDYLH---TKCRIIHTDIKPENILLSVNEQYIRRLAAEATEWQRSGAPPPSGSAVSTAPATAGNFLVNPLEPKNAE  231 (397)
T ss_dssp             HHHHHHHHH---HTTCEECCCCSGGGEEECCCHHHHHHHHHHHC---------------------CCTTSCCTTSGGGGG
T ss_pred             HHHHHHHHH---HhCCEecCCCCHHHeeEeccchhhhhhhhhhHHHhhcCCCCCCCCccccCCccccccccccccccccc
Confidence            999999999   77 999999999999998775                                               


Q ss_pred             --CeEEeeccCceecCCCCcceeecccccCCCccCcccccccCCCcchhhHHHHHHHHHHHhcCccccc
Q 044022          106 --VAKWFDFLLSISIPEGETHITTDRVIGTRGYSAPEYISICVLNEKSNVFSFGAFLFELLAGRIHIWD  172 (241)
Q Consensus       106 --~~~l~df~~~~~~~~~~~~~~~~~~~~~~~~~aPE~~~~~~~~~~~Di~s~G~~~~~~~~g~~p~~~  172 (241)
                        .++|+|||.+.......     ....||+.|+|||++.+..++.++||||||+++|+|++|+.||..
T Consensus       232 ~~~~kl~DfG~a~~~~~~~-----~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~elltg~~pf~~  295 (397)
T 1wak_A          232 KLKVKIADLGNACWVHKHF-----TEDIQTRQYRSLEVLIGSGYNTPADIWSTACMAFELATGDYLFEP  295 (397)
T ss_dssp             GCCEEECCGGGCEETTBCS-----CSCCSCGGGCCHHHHHTSCCCTHHHHHHHHHHHHHHHHSSCSCCC
T ss_pred             ccceEeccccccccccccC-----ccCCCCCcccCChhhcCCCCCcHHHHHHHHHHHHHHhhCCCCCCC
Confidence              79999999998664332     334689999999999998999999999999999999999999965


No 229
>2i6l_A Mitogen-activated protein kinase 6; MAPK6, ERK3, extracellular signal regulated kinase 3, serine phosphorylation, threonine phosphorylation; 2.25A {Homo sapiens}
Probab=100.00  E-value=5.9e-37  Score=248.50  Aligned_cols=158  Identities=18%  Similarity=0.270  Sum_probs=130.0

Q ss_pred             ccHHHHHHHHHHHHhcCCCcccceeeeee--------------eCCcceEEEEecCCCCHHHhhcCCCc---hHHHHHHH
Q 044022           11 HTYGSCINNITYAAQMSHNHILKRIGCCL--------------QTPIPILVFQSVEYGTLRDCIFGAPL---PRLKIASD   73 (241)
Q Consensus        11 ~~~~~~~~e~~~l~~l~h~~iv~~~~~~~--------------~~~~~~lv~e~~~~~sL~~~l~~~~~---~~~~~~~~   73 (241)
                      ...+++.+|++++++++||||+++++++.              ..+..++||||+. |+|.+++.....   ....++.+
T Consensus        50 ~~~~~~~~e~~~l~~l~h~~iv~~~~~~~~~~~~~~~~~~~~~~~~~~~lv~e~~~-~~L~~~~~~~~~~~~~~~~~~~q  128 (320)
T 2i6l_A           50 QSVKHALREIKIIRRLDHDNIVKVFEILGPSGSQLTDDVGSLTELNSVYIVQEYME-TDLANVLEQGPLLEEHARLFMYQ  128 (320)
T ss_dssp             HHHHHHHHHHHHHHTCCCTTBCCEEEEECTTSCBCCC----CCSCSEEEEEEECCS-EEHHHHHTTCCCCHHHHHHHHHH
T ss_pred             HHHHHHHHHHHHHHhcCCCCeeEEEEeccccccccccccccccccCceeEEeeccC-CCHHHHhhcCCccHHHHHHHHHH
Confidence            45677899999999999999999999874              3457899999997 699999976543   46788999


Q ss_pred             HHHHhchhhcCCCCCceeccCCCCCeeec-CCCCeEEeeccCceecCCCCc-ceeecccccCCCccCcccccc-cCCCcc
Q 044022           74 IVNSLAYLHFGFPRPIVLRNFKTQNILFN-EENVAKWFDFLLSISIPEGET-HITTDRVIGTRGYSAPEYISI-CVLNEK  150 (241)
Q Consensus        74 i~~~l~~lh~~~~~~ivh~dl~~~nil~~-~~~~~~l~df~~~~~~~~~~~-~~~~~~~~~~~~~~aPE~~~~-~~~~~~  150 (241)
                      ++.||.|||   +.+++|+||||+||+++ .++.+||+|||.+........ ........++..|+|||.+.+ ..++.+
T Consensus       129 i~~~l~~lH---~~~i~H~dlkp~Nil~~~~~~~~kl~Dfg~~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~  205 (320)
T 2i6l_A          129 LLRGLKYIH---SANVLHRDLKPANLFINTEDLVLKIGDFGLARIMDPHYSHKGHLSEGLVTKWYRSPRLLLSPNNYTKA  205 (320)
T ss_dssp             HHHHHHHHH---HTTCBCCCCSGGGEEEETTTTEEEECCCTTCBCC--------CCCGGGSCCTTCCHHHHHCTTCCCHH
T ss_pred             HHHHHHHHH---hCCEecCCCCHHHEEEcCCCCeEEEccCccccccCCCcccccccccccccccccCcHHhcCcccCCch
Confidence            999999999   89999999999999997 567999999999876543211 111233457888999998865 678899


Q ss_pred             hhhHHHHHHHHHHHhcCccccc
Q 044022          151 SNVFSFGAFLFELLAGRIHIWD  172 (241)
Q Consensus       151 ~Di~s~G~~~~~~~~g~~p~~~  172 (241)
                      +||||||+++|+|++|+.||..
T Consensus       206 ~Di~slG~il~el~~g~~pf~~  227 (320)
T 2i6l_A          206 IDMWAAGCIFAEMLTGKTLFAG  227 (320)
T ss_dssp             HHHHHHHHHHHHHHHSSCSSCC
T ss_pred             hhhHhHHHHHHHHHhCCCCCCC
Confidence            9999999999999999999965


No 230
>3aln_A Dual specificity mitogen-activated protein kinase; protein AMP-PNP complex, transferase; HET: ANP; 2.30A {Homo sapiens} PDB: 3alo_A*
Probab=100.00  E-value=1.2e-37  Score=253.73  Aligned_cols=216  Identities=19%  Similarity=0.217  Sum_probs=140.3

Q ss_pred             CcccccccccccHHHHHHHHH-HHHhcCCCcccceeeeeeeCCcceEEEEecCCCCHHHhhcC------CCc---hHHHH
Q 044022            1 MKFYGHEYHRHTYGSCINNIT-YAAQMSHNHILKRIGCCLQTPIPILVFQSVEYGTLRDCIFG------APL---PRLKI   70 (241)
Q Consensus         1 iK~~~~~~~~~~~~~~~~e~~-~l~~l~h~~iv~~~~~~~~~~~~~lv~e~~~~~sL~~~l~~------~~~---~~~~~   70 (241)
                      ||.+..........++.+|+. +++.++||||+++++++...+..++||||+. ++|.+++..      ...   ....+
T Consensus        52 iK~~~~~~~~~~~~~~~~e~~~~~~~~~h~niv~~~~~~~~~~~~~lv~e~~~-~~l~~~~~~~~~~~~~~~~~~~~~~i  130 (327)
T 3aln_A           52 VKRIRSTVDEKEQKQLLMDLDVVMRSSDCPYIVQFYGALFREGDCWICMELMS-TSFDKFYKYVYSVLDDVIPEEILGKI  130 (327)
T ss_dssp             EEEEECCCCHHHHHHHHHHHHHHHSSCCCTTBCCEEEEEECSSEEEEEECCCS-EEHHHHHHHHHHTTCCCCCHHHHHHH
T ss_pred             EEEeecccCchHHHHHHHHHHHHHHcCCCCcEeeeeeEEEeCCceEEEEeecC-CChHHHHHHHHhhhcccCcHHHHHHH
Confidence            355544433344556667766 6777899999999999999999999999997 588877652      222   46789


Q ss_pred             HHHHHHHhchhhcCCCC-CceeccCCCCCeeecCCCCeEEeeccCceecCCCCcceeecccccCCCccCcccc----ccc
Q 044022           71 ASDIVNSLAYLHFGFPR-PIVLRNFKTQNILFNEENVAKWFDFLLSISIPEGETHITTDRVIGTRGYSAPEYI----SIC  145 (241)
Q Consensus        71 ~~~i~~~l~~lh~~~~~-~ivh~dl~~~nil~~~~~~~~l~df~~~~~~~~~~~~~~~~~~~~~~~~~aPE~~----~~~  145 (241)
                      +.+++.||.|||   +. +++||||||+||+++.++.+||+|||.+........   .....|++.|+|||++    .+.
T Consensus       131 ~~~i~~~l~~lH---~~~~ivH~dlkp~NIll~~~~~~kl~Dfg~~~~~~~~~~---~~~~~gt~~y~aPE~~~~~~~~~  204 (327)
T 3aln_A          131 TLATVKALNHLK---ENLKIIHRDIKPSNILLDRSGNIKLCDFGISGQLVDSIA---KTRDAGCRPYMAPERIDPSASRQ  204 (327)
T ss_dssp             HHHHHHHHHHHH---HHHSCCCSCCCGGGEEEETTTEEEECCCSSSCC--------------------------------
T ss_pred             HHHHHHHHHHHh---ccCCEeECCCCHHHEEEcCCCCEEEccCCCceecccccc---cccCCCCccccCceeeccccCcC
Confidence            999999999999   77 999999999999999999999999999876543321   1233688999999998    455


Q ss_pred             CCCcchhhHHHHHHHHHHHhcCcccccccccCCCcccchHHHHHHHhhhcccCCCCCCccccCCCchhHHHHHHHHHHHH
Q 044022          146 VLNEKSNVFSFGAFLFELLAGRIHIWDLLKDTHDHGCFFNEYLKNYLEDKRFTGIPAPIIVQDIPCIEKEQQLHASAQLT  225 (241)
Q Consensus       146 ~~~~~~Di~s~G~~~~~~~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~  225 (241)
                      .++.++||||||+++|+|++|..||.......        +   ...  ..... ..+.+.....    ...+..+.+++
T Consensus       205 ~~~~~~Di~slG~il~~l~~g~~pf~~~~~~~--------~---~~~--~~~~~-~~~~~~~~~~----~~~~~~l~~li  266 (327)
T 3aln_A          205 GYDVRSDVWSLGITLYELATGRFPYPKWNSVF--------D---QLT--QVVKG-DPPQLSNSEE----REFSPSFINFV  266 (327)
T ss_dssp             -CCSHHHHHHHHHHHHHHHHSCCCSSCC------------------C--CCCCS-CCCCCCCCSS----CCCCHHHHHHH
T ss_pred             CCCchhhHHHHHHHHHHHHHCCCCCCCcchHH--------H---HHH--HHhcC-CCCCCCCccc----ccCCHHHHHHH
Confidence            68899999999999999999999996421110        0   000  00000 0011110000    01235789999


Q ss_pred             HHhccCCCCCCCCCCC
Q 044022          226 LECVNNSPEDRPTMVD  241 (241)
Q Consensus       226 ~~cl~~~p~~Rpt~~e  241 (241)
                      .+||+.||++|||++|
T Consensus       267 ~~~l~~dp~~Rps~~e  282 (327)
T 3aln_A          267 NLCLTKDESKRPKYKE  282 (327)
T ss_dssp             HHHTCSSGGGSCCHHH
T ss_pred             HHHhhCChhhCcCHHH
Confidence            9999999999999753


No 231
>1blx_A Cyclin-dependent kinase 6; inhibitor protein, cyclin-dependent kinase, cell cycle control, alpha/beta, complex (inhibitor protein/kinase); 1.90A {Homo sapiens} SCOP: d.144.1.7 PDB: 1bi7_A 1bi8_A 1g3n_A 2f2c_B* 1jow_B* 2euf_B* 1xo2_B* 3nup_A* 3nux_A* 2w9z_B 2w99_B 2w96_B 2w9f_B
Probab=100.00  E-value=1.2e-36  Score=247.65  Aligned_cols=153  Identities=22%  Similarity=0.314  Sum_probs=130.7

Q ss_pred             HHHHHHHHHHHHhc---CCCcccceeeeee-----eCCcceEEEEecCCCCHHHhhcCCC---c---hHHHHHHHHHHHh
Q 044022           13 YGSCINNITYAAQM---SHNHILKRIGCCL-----QTPIPILVFQSVEYGTLRDCIFGAP---L---PRLKIASDIVNSL   78 (241)
Q Consensus        13 ~~~~~~e~~~l~~l---~h~~iv~~~~~~~-----~~~~~~lv~e~~~~~sL~~~l~~~~---~---~~~~~~~~i~~~l   78 (241)
                      ...+.+|+.+++.+   +||||+++++++.     .....++|+||+. |+|.+++....   .   ....++.+++.||
T Consensus        55 ~~~~~~e~~~l~~l~~~~h~~i~~~~~~~~~~~~~~~~~~~lv~e~~~-~~L~~~l~~~~~~~~~~~~~~~~~~qi~~~l  133 (326)
T 1blx_A           55 PLSTIREVAVLRHLETFEHPNVVRLFDVCTVSRTDRETKLTLVFEHVD-QDLTTYLDKVPEPGVPTETIKDMMFQLLRGL  133 (326)
T ss_dssp             BCTHHHHHHHHHHHHHTCCTTBCCEEEEEEEEECSSEEEEEEEEECCS-CBHHHHHHHSCTTCSCHHHHHHHHHHHHHHH
T ss_pred             CchhhHHHHHHHhhhccCCCCeEeeeeeeeecccCCCceEEEEEecCC-CCHHHHHHhcccCCCCHHHHHHHHHHHHHHH
Confidence            44677888888777   8999999999987     4557899999997 69999886532   1   4678999999999


Q ss_pred             chhhcCCCCCceeccCCCCCeeecCCCCeEEeeccCceecCCCCcceeecccccCCCccCcccccccCCCcchhhHHHHH
Q 044022           79 AYLHFGFPRPIVLRNFKTQNILFNEENVAKWFDFLLSISIPEGETHITTDRVIGTRGYSAPEYISICVLNEKSNVFSFGA  158 (241)
Q Consensus        79 ~~lh~~~~~~ivh~dl~~~nil~~~~~~~~l~df~~~~~~~~~~~~~~~~~~~~~~~~~aPE~~~~~~~~~~~Di~s~G~  158 (241)
                      .|||   +.+++|+||||+||+++.++.++|+|||.+.......   ......++..|+|||++.+..++.++||||||+
T Consensus       134 ~~lH---~~gi~H~dlkp~Nili~~~~~~kl~Dfg~~~~~~~~~---~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~  207 (326)
T 1blx_A          134 DFLH---SHRVVHRDLKPQNILVTSSGQIKLADFGLARIYSFQM---ALTSVVVTLWYRAPEVLLQSSYATPVDLWSVGC  207 (326)
T ss_dssp             HHHH---HTTCCCCCCCGGGEEECTTCCEEECSCCSCCCCCGGG---GGCCCCCCCTTCCHHHHTTCCCCTHHHHHHHHH
T ss_pred             HHHH---HCCceeccCCHHHeEEcCCCCEEEecCcccccccCCC---CccccccccceeCHHHHhcCCCCcchhHHHHHH
Confidence            9999   8999999999999999999999999999987554322   123346889999999999889999999999999


Q ss_pred             HHHHHHhcCccccc
Q 044022          159 FLFELLAGRIHIWD  172 (241)
Q Consensus       159 ~~~~~~~g~~p~~~  172 (241)
                      ++|+|++|+.||..
T Consensus       208 il~~l~~g~~pf~~  221 (326)
T 1blx_A          208 IFAEMFRRKPLFRG  221 (326)
T ss_dssp             HHHHHHHSSCSCCC
T ss_pred             HHHHHHcCCCCCCC
Confidence            99999999999965


No 232
>1z57_A Dual specificity protein kinase CLK1; protein tyrosine kinase, splicing, human, 10Z-hymendialdisine, structural genomics; HET: DBQ; 1.70A {Homo sapiens} PDB: 2vag_A*
Probab=100.00  E-value=9.9e-37  Score=248.96  Aligned_cols=152  Identities=22%  Similarity=0.232  Sum_probs=132.6

Q ss_pred             cHHHHHHHHHHHHhcCCCc------ccceeeeeeeCCcceEEEEecCCCCHHHhhcCCC------chHHHHHHHHHHHhc
Q 044022           12 TYGSCINNITYAAQMSHNH------ILKRIGCCLQTPIPILVFQSVEYGTLRDCIFGAP------LPRLKIASDIVNSLA   79 (241)
Q Consensus        12 ~~~~~~~e~~~l~~l~h~~------iv~~~~~~~~~~~~~lv~e~~~~~sL~~~l~~~~------~~~~~~~~~i~~~l~   79 (241)
                      ..+.+.+|+++++.++|++      ++++++++...+..++||||+ +++|.+++....      .....++.|++.||.
T Consensus        54 ~~~~~~~e~~~l~~l~~~~~~~~~~i~~~~~~~~~~~~~~lv~e~~-~~~l~~~l~~~~~~~~~~~~~~~~~~qi~~~l~  132 (339)
T 1z57_A           54 YCEAARSEIQVLEHLNTTDPNSTFRCVQMLEWFEHHGHICIVFELL-GLSTYDFIKENGFLPFRLDHIRKMAYQICKSVN  132 (339)
T ss_dssp             HHHHHHHHHHHHHHHHHHCTTCTTCBCCEEEEEEETTEEEEEEECC-CCBHHHHHHHTTTCCCCHHHHHHHHHHHHHHHH
T ss_pred             hhHHHHHHHHHHHHhhhcCCCCceeeEeeecccccCCcEEEEEcCC-CCCHHHHHHhcCCCCCcHHHHHHHHHHHHHHHH
Confidence            3567889999999997654      999999999999999999999 789999986543      146789999999999


Q ss_pred             hhhcCCCCCceeccCCCCCeeecC-------------------CCCeEEeeccCceecCCCCcceeecccccCCCccCcc
Q 044022           80 YLHFGFPRPIVLRNFKTQNILFNE-------------------ENVAKWFDFLLSISIPEGETHITTDRVIGTRGYSAPE  140 (241)
Q Consensus        80 ~lh~~~~~~ivh~dl~~~nil~~~-------------------~~~~~l~df~~~~~~~~~~~~~~~~~~~~~~~~~aPE  140 (241)
                      |||   +++++||||||+||+++.                   ++.++|+|||.+.......     ....||+.|+|||
T Consensus       133 ~lH---~~~ivH~Dlkp~Nil~~~~~~~~~~~~~~~~~~~~~~~~~~kl~Dfg~~~~~~~~~-----~~~~gt~~y~aPE  204 (339)
T 1z57_A          133 FLH---SNKLTHTDLKPENILFVQSDYTEAYNPKIKRDERTLINPDIKVVDFGSATYDDEHH-----STLVSTRHYRAPE  204 (339)
T ss_dssp             HHH---HTTEECCCCCGGGEEESCCCEEEEEC----CEEEEESCCCEEECCCSSCEETTSCC-----CSSCSCGGGCCHH
T ss_pred             HHH---HCCCcCCCCCHHHEEEeccccccccCCccccccccccCCCceEeeCcccccCcccc-----ccccCCccccChH
Confidence            999   899999999999999987                   6689999999997654332     3346899999999


Q ss_pred             cccccCCCcchhhHHHHHHHHHHHhcCccccc
Q 044022          141 YISICVLNEKSNVFSFGAFLFELLAGRIHIWD  172 (241)
Q Consensus       141 ~~~~~~~~~~~Di~s~G~~~~~~~~g~~p~~~  172 (241)
                      ++.+..++.++||||||+++|+|++|..||..
T Consensus       205 ~~~~~~~~~~~Di~slG~il~el~~g~~pf~~  236 (339)
T 1z57_A          205 VILALGWSQPCDVWSIGCILIEYYLGFTVFPT  236 (339)
T ss_dssp             HHTTSCCCTHHHHHHHHHHHHHHHHSSCSCCC
T ss_pred             HhhCCCCCcchhhHHHHHHHHHHHhCCCCCCC
Confidence            99988999999999999999999999999954


No 233
>4e7w_A Glycogen synthase kinase 3; GSK3, PTyr195, transferase; HET: PTR; 3.30A {Ustilago maydis}
Probab=100.00  E-value=4.7e-37  Score=256.48  Aligned_cols=213  Identities=20%  Similarity=0.202  Sum_probs=148.7

Q ss_pred             HHHHHHHHhcCCCcccceeeeeeeCCc------ceEEEEecCCCCHHHhhc-----CCCc---hHHHHHHHHHHHhchhh
Q 044022           17 INNITYAAQMSHNHILKRIGCCLQTPI------PILVFQSVEYGTLRDCIF-----GAPL---PRLKIASDIVNSLAYLH   82 (241)
Q Consensus        17 ~~e~~~l~~l~h~~iv~~~~~~~~~~~------~~lv~e~~~~~sL~~~l~-----~~~~---~~~~~~~~i~~~l~~lh   82 (241)
                      .+|+++++.++||||+++++++...+.      .++||||+++ ++...+.     ....   ....++.|++.||.|||
T Consensus        80 ~~E~~il~~l~h~niv~l~~~~~~~~~~~~~~~~~lv~e~~~~-~l~~~~~~~~~~~~~~~~~~~~~~~~qi~~aL~~LH  158 (394)
T 4e7w_A           80 NRELQIMRIVKHPNVVDLKAFFYSNGDKKDEVFLNLVLEYVPE-TVYRASRHYAKLKQTMPMLLIKLYMYQLLRSLAYIH  158 (394)
T ss_dssp             CHHHHHHHTCCCTTBCCEEEEEEEESSSSSCEEEEEEEECCSE-EHHHHHHHHHHTTSCCCHHHHHHHHHHHHHHHHHHH
T ss_pred             HHHHHHHHhCCCCCcceEEEEEEecCCCCCceEEEEEeeccCc-cHHHHHHHHHhhcCCCCHHHHHHHHHHHHHHHHHHH
Confidence            379999999999999999999975443      7899999985 4443322     1111   46778999999999999


Q ss_pred             cCCCCCceeccCCCCCeeec-CCCCeEEeeccCceecCCCCcceeecccccCCCccCccccccc-CCCcchhhHHHHHHH
Q 044022           83 FGFPRPIVLRNFKTQNILFN-EENVAKWFDFLLSISIPEGETHITTDRVIGTRGYSAPEYISIC-VLNEKSNVFSFGAFL  160 (241)
Q Consensus        83 ~~~~~~ivh~dl~~~nil~~-~~~~~~l~df~~~~~~~~~~~~~~~~~~~~~~~~~aPE~~~~~-~~~~~~Di~s~G~~~  160 (241)
                         +.+++||||||+|||++ .++.+||+|||++.........   ....+|+.|+|||++.+. .++.++||||||+++
T Consensus       159 ---~~~ivHrDlkp~Nill~~~~~~~kL~DFG~a~~~~~~~~~---~~~~~t~~y~aPE~~~~~~~~~~~~DiwSlG~il  232 (394)
T 4e7w_A          159 ---SIGICHRDIKPQNLLLDPPSGVLKLIDFGSAKILIAGEPN---VSYICSRYYRAPELIFGATNYTTNIDIWSTGCVM  232 (394)
T ss_dssp             ---HTTEECSCCSGGGEEEETTTTEEEECCCTTCEECCTTCCC---CSSCSCGGGCCHHHHTTCSSCCTHHHHHHHHHHH
T ss_pred             ---HCCccCCCCCHHHEEEcCCCCcEEEeeCCCcccccCCCCC---cccccCcCccCHHHHcCCCCCCcHHHHHHHHHHH
Confidence               89999999999999999 7899999999999876443221   234689999999998765 589999999999999


Q ss_pred             HHHHhcCcccccccccCCCcccchHHHHHHH---------hhhcccCCCCCCccccC-CCchhHHHHHHHHHHHHHHhcc
Q 044022          161 FELLAGRIHIWDLLKDTHDHGCFFNEYLKNY---------LEDKRFTGIPAPIIVQD-IPCIEKEQQLHASAQLTLECVN  230 (241)
Q Consensus       161 ~~~~~g~~p~~~~~~~~~~~~~~~~~~~~~~---------~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~l~~~cl~  230 (241)
                      |+|++|+.||......     ....+.....         .....+....-+..... .........++.+.+|+.+||+
T Consensus       233 ~ell~g~~pf~~~~~~-----~~l~~i~~~~g~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~  307 (394)
T 4e7w_A          233 AELMQGQPLFPGESGI-----DQLVEIIKVLGTPSREQIKTMNPNYMEHKFPQIRPHPFSKVFRPRTPPDAIDLISRLLE  307 (394)
T ss_dssp             HHHHHSSCSSCCSSHH-----HHHHHHHHHHCCCCHHHHHHHCGGGSSSCCCCCCCCCHHHHSCTTCCHHHHHHHHHHCC
T ss_pred             HHHHhCCCCCCCCCHH-----HHHHHHHHHhCCCCHHHHHhhChhhhhhccccccCCcHHHhccccCCHHHHHHHHHHhC
Confidence            9999999999652110     0111111100         00001111110110000 0000001133678999999999


Q ss_pred             CCCCCCCCCCC
Q 044022          231 NSPEDRPTMVD  241 (241)
Q Consensus       231 ~~p~~Rpt~~e  241 (241)
                      .||++|||+.|
T Consensus       308 ~dP~~R~t~~e  318 (394)
T 4e7w_A          308 YTPSARLTAIE  318 (394)
T ss_dssp             SSGGGSCCHHH
T ss_pred             CChhhCCCHHH
Confidence            99999999753


No 234
>3eb0_A Putative uncharacterized protein; kinase cryptosporidium parvum, ATP-binding, kinase, nucleoti binding; HET: PTR DRK; 2.65A {Cryptosporidium parvum iowa II}
Probab=100.00  E-value=1.3e-36  Score=252.94  Aligned_cols=210  Identities=18%  Similarity=0.201  Sum_probs=150.7

Q ss_pred             HHHHHHHHHhcCCCcccceeeeeeeC--------------------------------------CcceEEEEecCCCCHH
Q 044022           16 CINNITYAAQMSHNHILKRIGCCLQT--------------------------------------PIPILVFQSVEYGTLR   57 (241)
Q Consensus        16 ~~~e~~~l~~l~h~~iv~~~~~~~~~--------------------------------------~~~~lv~e~~~~~sL~   57 (241)
                      ..+|+++++.++||||+++++++...                                      ...++||||++ ++|.
T Consensus        47 ~~~E~~il~~l~hpnIv~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lv~e~~~-~~L~  125 (383)
T 3eb0_A           47 KNRELDIMKVLDHVNIIKLVDYFYTTGDEEPKPPQPPDDHNKLGGKNNGVNNHHKSVIVNPSQNKYLNVIMEYVP-DTLH  125 (383)
T ss_dssp             CCHHHHHHTTCCCTTBCCEEEEEEEC-------------------------------------CCEEEEEECCCS-EEHH
T ss_pred             HHHHHHHHHHcCCCCccchhheeeecCcccccccccccccccccccccccccccccccccCCCceEEEEEEecCC-ccHH
Confidence            34799999999999999999998543                                      34789999997 5877


Q ss_pred             HhhcC----C-Cc---hHHHHHHHHHHHhchhhcCCCCCceeccCCCCCeeec-CCCCeEEeeccCceecCCCCcceeec
Q 044022           58 DCIFG----A-PL---PRLKIASDIVNSLAYLHFGFPRPIVLRNFKTQNILFN-EENVAKWFDFLLSISIPEGETHITTD  128 (241)
Q Consensus        58 ~~l~~----~-~~---~~~~~~~~i~~~l~~lh~~~~~~ivh~dl~~~nil~~-~~~~~~l~df~~~~~~~~~~~~~~~~  128 (241)
                      +.+..    . ..   ....++.|++.||.|||   +.+++||||||+||+++ .++.+||+|||.+.........   .
T Consensus       126 ~~l~~~~~~~~~l~~~~~~~i~~qi~~aL~~LH---~~gi~H~Dikp~Nil~~~~~~~~kl~Dfg~a~~~~~~~~~---~  199 (383)
T 3eb0_A          126 KVLKSFIRSGRSIPMNLISIYIYQLFRAVGFIH---SLGICHRDIKPQNLLVNSKDNTLKLCDFGSAKKLIPSEPS---V  199 (383)
T ss_dssp             HHHHHHHHTTCCCCHHHHHHHHHHHHHHHHHHH---TTTEECSCCCGGGEEEETTTTEEEECCCTTCEECCTTSCC---C
T ss_pred             HHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHH---HCcCccCccCHHHEEEcCCCCcEEEEECCCCcccCCCCCC---c
Confidence            76642    2 11   46778999999999999   99999999999999998 6889999999999876443321   2


Q ss_pred             ccccCCCccCccccccc-CCCcchhhHHHHHHHHHHHhcCcccccccccCCCcccchHHHHHHHh---------hhcccC
Q 044022          129 RVIGTRGYSAPEYISIC-VLNEKSNVFSFGAFLFELLAGRIHIWDLLKDTHDHGCFFNEYLKNYL---------EDKRFT  198 (241)
Q Consensus       129 ~~~~~~~~~aPE~~~~~-~~~~~~Di~s~G~~~~~~~~g~~p~~~~~~~~~~~~~~~~~~~~~~~---------~~~~~~  198 (241)
                      ...+++.|+|||.+.+. .++.++||||+|+++|+|++|+.||......     ...........         ....+.
T Consensus       200 ~~~~t~~y~aPE~~~~~~~~~~~~DiwslG~il~ell~g~~pf~~~~~~-----~~~~~i~~~~g~p~~~~~~~~~~~~~  274 (383)
T 3eb0_A          200 AYICSRFYRAPELMLGATEYTPSIDLWSIGCVFGELILGKPLFSGETSI-----DQLVRIIQIMGTPTKEQMIRMNPHYT  274 (383)
T ss_dssp             CCCCCSSCCCHHHHTTCSSCCTHHHHHHHHHHHHHHHHSSCSSCCSSHH-----HHHHHHHHHHCCCCHHHHHHHCTTC-
T ss_pred             CcccCCCccCHHHhcCCCCCCcchhhhhHHHHHHHHHhCCCCCCCCChH-----HHHHHHHHHhCCCCHHHHHHhCcccc
Confidence            34678999999998865 4899999999999999999999999652111     01111111000         000111


Q ss_pred             CC-----CCCccccCCCchhHHHHHHHHHHHHHHhccCCCCCCCCCCC
Q 044022          199 GI-----PAPIIVQDIPCIEKEQQLHASAQLTLECVNNSPEDRPTMVD  241 (241)
Q Consensus       199 ~~-----~~~~~~~~~~~~~~~~~~~~~~~l~~~cl~~~p~~Rpt~~e  241 (241)
                      ..     ....+....+    ...+..+.+|+.+||+.||++|||+.|
T Consensus       275 ~~~~~~~~~~~~~~~~~----~~~~~~~~~li~~~L~~dP~~R~t~~e  318 (383)
T 3eb0_A          275 EVRFPTLKAKDWRKILP----EGTPSLAIDLLEQILRYEPDLRINPYE  318 (383)
T ss_dssp             -CCCCCCCCCCHHHHSC----TTCCHHHHHHHHHHCCSSGGGSCCHHH
T ss_pred             cccCCccCcccHHhhCC----CCCCHHHHHHHHHHccCChhhCCCHHH
Confidence            11     1111111011    123367899999999999999999853


No 235
>3ll6_A Cyclin G-associated kinase; transferase, protein kinase, serine/threonine kinase, cyclin clathrine, membrane trafficking, structural genomics; 2.10A {Homo sapiens}
Probab=100.00  E-value=1.5e-37  Score=253.69  Aligned_cols=201  Identities=21%  Similarity=0.302  Sum_probs=137.7

Q ss_pred             ccHHHHHHHHHHHHhcC-CCcccceeeeeee--------CCcceEEEEecCCCCHHHhhcC----CCc---hHHHHHHHH
Q 044022           11 HTYGSCINNITYAAQMS-HNHILKRIGCCLQ--------TPIPILVFQSVEYGTLRDCIFG----APL---PRLKIASDI   74 (241)
Q Consensus        11 ~~~~~~~~e~~~l~~l~-h~~iv~~~~~~~~--------~~~~~lv~e~~~~~sL~~~l~~----~~~---~~~~~~~~i   74 (241)
                      ...+.+.+|+.+++++. ||||+++++++..        ...+++|+||+. |+|.+++..    ...   .+..++.++
T Consensus        67 ~~~~~~~~e~~~l~~l~~h~~iv~~~~~~~~~~~~~~~~~~~~~lv~e~~~-g~L~~~l~~~~~~~~~~~~~~~~i~~qi  145 (337)
T 3ll6_A           67 EKNRAIIQEVCFMKKLSGHPNIVQFCSAASIGKEESDTGQAEFLLLTELCK-GQLVEFLKKMESRGPLSCDTVLKIFYQT  145 (337)
T ss_dssp             HHHHHHHHHHHHHHHHTTSTTBCCEEEEEEECTTTSTTSSEEEEEEEECCS-EEHHHHHHHHHTTCSCCHHHHHHHHHHH
T ss_pred             HHHHHHHHHHHHHHHhccCCChhhccccccccccccccCCceEEEEEEecC-CCHHHHHHHhhccCCCCHHHHHHHHHHH
Confidence            34667899999999996 9999999999953        335799999996 799888753    112   467899999


Q ss_pred             HHHhchhhcCCCCC--ceeccCCCCCeeecCCCCeEEeeccCceecCCCCcce----------eecccccCCCccCcccc
Q 044022           75 VNSLAYLHFGFPRP--IVLRNFKTQNILFNEENVAKWFDFLLSISIPEGETHI----------TTDRVIGTRGYSAPEYI  142 (241)
Q Consensus        75 ~~~l~~lh~~~~~~--ivh~dl~~~nil~~~~~~~~l~df~~~~~~~~~~~~~----------~~~~~~~~~~~~aPE~~  142 (241)
                      +.||.|||   +.+  ++|+||||+|||++.++.+||+|||.+..........          ......+++.|+|||++
T Consensus       146 ~~~l~~LH---~~~~~ivH~Dikp~NIl~~~~~~~kl~Dfg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~t~~y~aPE~~  222 (337)
T 3ll6_A          146 CRAVQHMH---RQKPPIIHRDLKVENLLLSNQGTIKLCDFGSATTISHYPDYSWSAQRRALVEEEITRNTTPMYRTPEII  222 (337)
T ss_dssp             HHHHHHHH---TSSSCCBCCCCCGGGCEECTTSCEEBCCCTTCBCCSSCC------------------------------
T ss_pred             HHHHHHHH---hCCCCEEEccCCcccEEECCCCCEEEecCccceeccccCcccccccccccchhhccccCCCCcCChhhh
Confidence            99999999   888  9999999999999999999999999997654432111          11134588999999998


Q ss_pred             ---cccCCCcchhhHHHHHHHHHHHhcCcccccccccCCCcccchHHHHHHHhhhcccCCCCCCccccCCCchhHHHHHH
Q 044022          143 ---SICVLNEKSNVFSFGAFLFELLAGRIHIWDLLKDTHDHGCFFNEYLKNYLEDKRFTGIPAPIIVQDIPCIEKEQQLH  219 (241)
Q Consensus       143 ---~~~~~~~~~Di~s~G~~~~~~~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  219 (241)
                         .+..++.++||||||+++|+|++|+.||.......             ... .... ...   ..        ..+.
T Consensus       223 ~~~~~~~~~~~~Dv~slG~il~el~~g~~p~~~~~~~~-------------~~~-~~~~-~~~---~~--------~~~~  276 (337)
T 3ll6_A          223 DLYSNFPIGEKQDIWALGCILYLLCFRQHPFEDGAKLR-------------IVN-GKYS-IPP---HD--------TQYT  276 (337)
T ss_dssp             -CCTTSCSSHHHHHHHHHHHHHHHHHSSCCC--------------------------CC-CCT---TC--------CSSG
T ss_pred             hccccCCCChHHhHHHHHHHHHHHHhCCCCCcchhHHH-------------hhc-Cccc-CCc---cc--------ccch
Confidence               55678899999999999999999999995421110             000 0000 000   01        1113


Q ss_pred             HHHHHHHHhccCCCCCCCCCCC
Q 044022          220 ASAQLTLECVNNSPEDRPTMVD  241 (241)
Q Consensus       220 ~~~~l~~~cl~~~p~~Rpt~~e  241 (241)
                      .+.+++.+||+.||++|||++|
T Consensus       277 ~~~~li~~~l~~~p~~Rps~~e  298 (337)
T 3ll6_A          277 VFHSLIRAMLQVNPEERLSIAE  298 (337)
T ss_dssp             GGHHHHHHHSCSSGGGSCCHHH
T ss_pred             HHHHHHHHHccCChhhCcCHHH
Confidence            4789999999999999999753


No 236
>2eu9_A Dual specificity protein kinase CLK3; kinase domain, transferase; 1.53A {Homo sapiens} PDB: 2wu6_A* 2wu7_A* 3raw_A* 2exe_A 3nr9_A*
Probab=100.00  E-value=9e-36  Score=244.85  Aligned_cols=152  Identities=18%  Similarity=0.196  Sum_probs=130.7

Q ss_pred             cHHHHHHHHHHHHhcCCCc------ccceeeeeeeCCcceEEEEecCCCCHHHhhcCCC---c---hHHHHHHHHHHHhc
Q 044022           12 TYGSCINNITYAAQMSHNH------ILKRIGCCLQTPIPILVFQSVEYGTLRDCIFGAP---L---PRLKIASDIVNSLA   79 (241)
Q Consensus        12 ~~~~~~~e~~~l~~l~h~~------iv~~~~~~~~~~~~~lv~e~~~~~sL~~~l~~~~---~---~~~~~~~~i~~~l~   79 (241)
                      ..+.+.+|++++++++|++      ++.+.+++...+..++||||+ +++|.+++....   .   ....++.||+.||.
T Consensus        59 ~~~~~~~E~~~l~~l~~~~~~~~~~~~~~~~~~~~~~~~~lv~e~~-~~~l~~~l~~~~~~~~~~~~~~~i~~qi~~~L~  137 (355)
T 2eu9_A           59 YREAARLEINVLKKIKEKDKENKFLCVLMSDWFNFHGHMCIAFELL-GKNTFEFLKENNFQPYPLPHVRHMAYQLCHALR  137 (355)
T ss_dssp             HHHHHHHHHHHHHHHHHHCTTSCSCBCCEEEEEEETTEEEEEEECC-CCBHHHHHHHTTTCCCCHHHHHHHHHHHHHHHH
T ss_pred             chhHHHHHHHHHHHHhhcCCCCceeEEEeeeeeeeCCeEEEEEecc-CCChHHHHHhccCCCCCHHHHHHHHHHHHHHHH
Confidence            4567889999999997765      889999999999999999999 567777664332   1   46789999999999


Q ss_pred             hhhcCCCCCceeccCCCCCeee-------------------cCCCCeEEeeccCceecCCCCcceeecccccCCCccCcc
Q 044022           80 YLHFGFPRPIVLRNFKTQNILF-------------------NEENVAKWFDFLLSISIPEGETHITTDRVIGTRGYSAPE  140 (241)
Q Consensus        80 ~lh~~~~~~ivh~dl~~~nil~-------------------~~~~~~~l~df~~~~~~~~~~~~~~~~~~~~~~~~~aPE  140 (241)
                      |||   +.+++||||||+|||+                   +.++.+||+|||.+.......     ....||+.|+|||
T Consensus       138 ~lH---~~~ivH~Dlkp~NIll~~~~~~~~~~~~~~~~~~~~~~~~~kl~Dfg~~~~~~~~~-----~~~~gt~~y~aPE  209 (355)
T 2eu9_A          138 FLH---ENQLTHTDLKPENILFVNSEFETLYNEHKSCEEKSVKNTSIRVADFGSATFDHEHH-----TTIVATRHYRPPE  209 (355)
T ss_dssp             HHH---TTTEECCCCCGGGEEESCCCEEEEECCC-CCCEEEESCCCEEECCCTTCEETTSCC-----CSSCSCGGGCCHH
T ss_pred             HHH---HCCcccCCCCHHHEEEecccccccccccccccccccCCCcEEEeecCccccccccc-----cCCcCCCcccCCe
Confidence            999   9999999999999999                   678899999999997654332     3346899999999


Q ss_pred             cccccCCCcchhhHHHHHHHHHHHhcCccccc
Q 044022          141 YISICVLNEKSNVFSFGAFLFELLAGRIHIWD  172 (241)
Q Consensus       141 ~~~~~~~~~~~Di~s~G~~~~~~~~g~~p~~~  172 (241)
                      ++.+..++.++||||||+++|+|++|..||..
T Consensus       210 ~~~~~~~~~~~Di~slG~il~el~~g~~pf~~  241 (355)
T 2eu9_A          210 VILELGWAQPCDVWSIGCILFEYYRGFTLFQT  241 (355)
T ss_dssp             HHTTCCCCTHHHHHHHHHHHHHHHHSSCSCCC
T ss_pred             eeecCCCCCccchHHHHHHHHHHHhCCCCCCC
Confidence            99988999999999999999999999999965


No 237
>3a99_A Proto-oncogene serine/threonine-protein kinase PI; PIM-1, P27KIP1, peptide drug, prostate cancer, transferase; HET: ANP; 1.60A {Homo sapiens} PDB: 3bgq_A* 3bgp_A* 2obj_A* 3bgz_A* 3t9i_A* 3dcv_A* 1xws_A* 2xj1_A* 2xix_A* 2xiz_A* 2xj0_A* 2xiy_A* 2xj2_A* 3f2a_A* 1xr1_A* 1xqz_A* 3cy2_A* 3cxw_A* 3cy3_A* 2bik_B* ...
Probab=100.00  E-value=7.3e-37  Score=248.63  Aligned_cols=192  Identities=19%  Similarity=0.273  Sum_probs=154.6

Q ss_pred             HHHHHHHHHHHHhcC--CCcccceeeeeeeCCcceEEEEecCC-CCHHHhhcCCC----chHHHHHHHHHHHhchhhcCC
Q 044022           13 YGSCINNITYAAQMS--HNHILKRIGCCLQTPIPILVFQSVEY-GTLRDCIFGAP----LPRLKIASDIVNSLAYLHFGF   85 (241)
Q Consensus        13 ~~~~~~e~~~l~~l~--h~~iv~~~~~~~~~~~~~lv~e~~~~-~sL~~~l~~~~----~~~~~~~~~i~~~l~~lh~~~   85 (241)
                      ...+.+|+.++++++  |+||+++++++...+..++|+|++.+ ++|.+++....    .....++.|++.||.|||   
T Consensus        90 ~~~~~~E~~~l~~l~~~~~~i~~~~~~~~~~~~~~lv~e~~~~~~~L~~~l~~~~~l~~~~~~~i~~qi~~~L~~LH---  166 (320)
T 3a99_A           90 GTRVPMEVVLLKKVSSGFSGVIRLLDWFERPDSFVLILERPEPVQDLFDFITERGALQEELARSFFWQVLEAVRHCH---  166 (320)
T ss_dssp             CCEEEHHHHHHHHHCSSSCSBCCEEEEEECSSEEEEEEECCSSEEEHHHHHHHHCSCCHHHHHHHHHHHHHHHHHHH---
T ss_pred             hhHHHHHHHHHHhhccCCCCceEEEEEEecCCcEEEEEEcCCCCccHHHHHhccCCCCHHHHHHHHHHHHHHHHHHH---
Confidence            356778999999996  59999999999999999999999975 89999886432    246789999999999999   


Q ss_pred             CCCceeccCCCCCeeec-CCCCeEEeeccCceecCCCCcceeecccccCCCccCcccccccCC-CcchhhHHHHHHHHHH
Q 044022           86 PRPIVLRNFKTQNILFN-EENVAKWFDFLLSISIPEGETHITTDRVIGTRGYSAPEYISICVL-NEKSNVFSFGAFLFEL  163 (241)
Q Consensus        86 ~~~ivh~dl~~~nil~~-~~~~~~l~df~~~~~~~~~~~~~~~~~~~~~~~~~aPE~~~~~~~-~~~~Di~s~G~~~~~~  163 (241)
                      +.+++||||||+||+++ .++.+||+|||.+........    ....|++.|+|||++.+..+ +.++||||||+++|+|
T Consensus       167 ~~~ivH~Dlkp~NIll~~~~~~~kL~Dfg~~~~~~~~~~----~~~~gt~~y~aPE~~~~~~~~~~~~Di~slG~il~el  242 (320)
T 3a99_A          167 NCGVLHRDIKDENILIDLNRGELKLIDFGSGALLKDTVY----TDFDGTRVYSPPEWIRYHRYHGRSAAVWSLGILLYDM  242 (320)
T ss_dssp             HTTEECCCCSGGGEEEETTTTEEEECCCTTCEECCSSCB----CCCCSCGGGSCHHHHHHSCBCHHHHHHHHHHHHHHHH
T ss_pred             HCCcEeCCCCHHHEEEeCCCCCEEEeeCccccccccccc----cCCCCCccCCChHHhccCCCCCccchHHhHHHHHHHH
Confidence            89999999999999999 778999999999987654322    23468999999999987665 6789999999999999


Q ss_pred             HhcCcccccccccCCCcccchHHHHHHHhhhcccCCCCCCccccCCCchhHHHHHHHHHHHHHHhccCCCCCCCCCCC
Q 044022          164 LAGRIHIWDLLKDTHDHGCFFNEYLKNYLEDKRFTGIPAPIIVQDIPCIEKEQQLHASAQLTLECVNNSPEDRPTMVD  241 (241)
Q Consensus       164 ~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~cl~~~p~~Rpt~~e  241 (241)
                      ++|+.||....               ...... .      ......        +..+.+++.+||+.||++|||++|
T Consensus       243 ~~g~~pf~~~~---------------~~~~~~-~------~~~~~~--------~~~~~~li~~~l~~dp~~Rps~~~  290 (320)
T 3a99_A          243 VCGDIPFEHDE---------------EIIRGQ-V------FFRQRV--------SSECQHLIRWCLALRPSDRPTFEE  290 (320)
T ss_dssp             HHSSCSCCSHH---------------HHHHCC-C------CCSSCC--------CHHHHHHHHHHTCSSGGGSCCHHH
T ss_pred             HHCCCCCCChh---------------hhhccc-c------cccccC--------CHHHHHHHHHHccCChhhCcCHHH
Confidence            99999995411               011110 0      011111        257889999999999999999853


No 238
>3fhr_A MAP kinase-activated protein kinase 3; kinase-inhibitor complex, ATP-binding, cytoplasm, nucleotide-binding, nucleus, phosphoprotein, polymorphism; HET: P4O; 1.90A {Homo sapiens} PDB: 3fxw_A* 3r1n_A* 3she_A* 2oza_A 3fyk_X* 3fyj_X* 2p3g_X* 3ka0_A* 3fpm_A* 2pzy_A* 3a2c_A* 3kc3_A* 3gok_A* 2jbo_A* 2jbp_A* 3r2y_A* 3r30_A* 3r2b_A*
Probab=100.00  E-value=1.6e-36  Score=248.23  Aligned_cols=199  Identities=20%  Similarity=0.272  Sum_probs=129.7

Q ss_pred             HHHHHhcCCCcccceeeeeee----CCcceEEEEecCCCCHHHhhcCCC---c---hHHHHHHHHHHHhchhhcCCCCCc
Q 044022           20 ITYAAQMSHNHILKRIGCCLQ----TPIPILVFQSVEYGTLRDCIFGAP---L---PRLKIASDIVNSLAYLHFGFPRPI   89 (241)
Q Consensus        20 ~~~l~~l~h~~iv~~~~~~~~----~~~~~lv~e~~~~~sL~~~l~~~~---~---~~~~~~~~i~~~l~~lh~~~~~~i   89 (241)
                      ...++.++||||+++++++..    ....++||||+++|+|.+++....   .   ....++.+++.||.|||   +.++
T Consensus        73 ~~~~~~~~h~~i~~~~~~~~~~~~~~~~~~lv~e~~~gg~L~~~l~~~~~~~l~~~~~~~i~~ql~~~l~~LH---~~~i  149 (336)
T 3fhr_A           73 DHHWQASGGPHIVCILDVYENMHHGKRCLLIIMECMEGGELFSRIQERGDQAFTEREAAEIMRDIGTAIQFLH---SHNI  149 (336)
T ss_dssp             HHHHHHTTSTTBCCEEEEEEEEETTEEEEEEEEECCTTEEHHHHHHTC-CCCCBHHHHHHHHHHHHHHHHHHH---HTTE
T ss_pred             HHHHHhcCCCChHHHHHHHhhccCCCceEEEEEeccCCCCHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHHH---hCCe
Confidence            344566799999999999976    445899999999999999997652   2   46789999999999999   8999


Q ss_pred             eeccCCCCCeeecC---CCCeEEeeccCceecCCCCcceeecccccCCCccCcccccccCCCcchhhHHHHHHHHHHHhc
Q 044022           90 VLRNFKTQNILFNE---ENVAKWFDFLLSISIPEGETHITTDRVIGTRGYSAPEYISICVLNEKSNVFSFGAFLFELLAG  166 (241)
Q Consensus        90 vh~dl~~~nil~~~---~~~~~l~df~~~~~~~~~~~~~~~~~~~~~~~~~aPE~~~~~~~~~~~Di~s~G~~~~~~~~g  166 (241)
                      +||||||+||+++.   ++.++|+|||.+........    ....+++.|+|||++.+..++.++||||||+++|+|++|
T Consensus       150 vH~dlkp~NIll~~~~~~~~~kl~Dfg~~~~~~~~~~----~~~~~t~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~g  225 (336)
T 3fhr_A          150 AHRDVKPENLLYTSKEKDAVLKLTDFGFAKETTQNAL----QTPCYTPYYVAPEVLGPEKYDKSCDMWSLGVIMYILLCG  225 (336)
T ss_dssp             ECSCCSGGGEEESCSSTTCCEEECCCTTCEEC--------------------------CHHHHHHHHHHHHHHHHHHHHS
T ss_pred             ecCCCCHHHEEEEecCCCceEEEeccccceecccccc----ccCCCCcCccChhhhCCCCCCchhhHHHHHHHHHHHHHC
Confidence            99999999999976   45699999999976543322    234678999999999888899999999999999999999


Q ss_pred             CcccccccccCCCcccchHHHHHHHhhhcccCCCCCCccccCCCchhHHHHHHHHHHHHHHhccCCCCCCCCCCC
Q 044022          167 RIHIWDLLKDTHDHGCFFNEYLKNYLEDKRFTGIPAPIIVQDIPCIEKEQQLHASAQLTLECVNNSPEDRPTMVD  241 (241)
Q Consensus       167 ~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~cl~~~p~~Rpt~~e  241 (241)
                      ..||..........     . ......... ...+.+..         ...+..+.+++.+||+.||++|||++|
T Consensus       226 ~~pf~~~~~~~~~~-----~-~~~~~~~~~-~~~~~~~~---------~~~~~~~~~li~~~L~~dP~~Rpt~~e  284 (336)
T 3fhr_A          226 FPPFYSNTGQAISP-----G-MKRRIRLGQ-YGFPNPEW---------SEVSEDAKQLIRLLLKTDPTERLTITQ  284 (336)
T ss_dssp             SCCC----------------------------CCCTTTS---------TTCCHHHHHHHHHHSCSSGGGSCCHHH
T ss_pred             CCCCCCccchhhhh-----h-HHHhhhccc-cccCchhh---------ccCCHHHHHHHHHHCCCChhHCcCHHH
Confidence            99996532211000     0 000000000 00011000         122367899999999999999999853


No 239
>1j1b_A Glycogen synthase kinase-3 beta; complex, TAU, AMPPNP, transferase; HET: ANP; 1.80A {Homo sapiens} SCOP: d.144.1.7 PDB: 1i09_A* 1j1c_A* 2jld_A* 3m1s_A* 3pup_A* 3du8_A* 1pyx_A* 1q41_A* 1q3w_A* 1q3d_A* 1q4l_A* 3q3b_A* 1q5k_A* 3i4b_A* 3l1s_A* 1r0e_A* 3zrk_A* 3zrl_A* 3zrm_A* 4dit_A* ...
Probab=100.00  E-value=1.3e-35  Score=249.67  Aligned_cols=212  Identities=23%  Similarity=0.206  Sum_probs=149.2

Q ss_pred             HHHHHHHHHhcCCCcccceeeeeeeCC------cceEEEEecCCCCHHHhhcC-----CCc---hHHHHHHHHHHHhchh
Q 044022           16 CINNITYAAQMSHNHILKRIGCCLQTP------IPILVFQSVEYGTLRDCIFG-----APL---PRLKIASDIVNSLAYL   81 (241)
Q Consensus        16 ~~~e~~~l~~l~h~~iv~~~~~~~~~~------~~~lv~e~~~~~sL~~~l~~-----~~~---~~~~~~~~i~~~l~~l   81 (241)
                      +.+|++++++++||||++++++|...+      ..++||||++ ++|.+.+..     ...   ....++.||+.||.||
T Consensus        94 ~~~E~~il~~l~hpniv~l~~~~~~~~~~~~~~~~~lv~e~~~-~~l~~~~~~~~~~~~~l~~~~~~~~~~qi~~aL~~L  172 (420)
T 1j1b_A           94 KNRELQIMRKLDHCNIVRLRYFFYSSGEKKDEVYLNLVLDYVP-ETVYRVARHYSRAKQTLPVIYVKLYMYQLFRSLAYI  172 (420)
T ss_dssp             CCHHHHHHHTCCCTTBCCEEEEEEEEETTTTEEEEEEEEECCC-EEHHHHHHHHHHTTCCCCHHHHHHHHHHHHHHHHHH
T ss_pred             HHHHHHHHHHcCCCCccceeeEEeccCCCCcceeEEeehhccc-ccHHHHHHHHhhccCCCCHHHHHHHHHHHHHHHHHH
Confidence            347999999999999999999986422      3679999997 466665432     111   4678899999999999


Q ss_pred             hcCCCCCceeccCCCCCeeecCC-CCeEEeeccCceecCCCCcceeecccccCCCccCccccccc-CCCcchhhHHHHHH
Q 044022           82 HFGFPRPIVLRNFKTQNILFNEE-NVAKWFDFLLSISIPEGETHITTDRVIGTRGYSAPEYISIC-VLNEKSNVFSFGAF  159 (241)
Q Consensus        82 h~~~~~~ivh~dl~~~nil~~~~-~~~~l~df~~~~~~~~~~~~~~~~~~~~~~~~~aPE~~~~~-~~~~~~Di~s~G~~  159 (241)
                      |   +.+|+||||||+|||++.+ +.+||+|||+++.......   .....+|+.|+|||++.+. .++.++|||||||+
T Consensus       173 H---~~~ivHrDlkp~NILl~~~~~~~kl~DFG~a~~~~~~~~---~~~~~~t~~y~aPE~~~~~~~~~~~~DiwSlG~i  246 (420)
T 1j1b_A          173 H---SFGICHRDIKPQNLLLDPDTAVLKLCDFGSAKQLVRGEP---NVSYICSRYYRAPELIFGATDYTSSIDVWSAGCV  246 (420)
T ss_dssp             H---TTTEECSCCSGGGEEEETTTTEEEECCCTTCEECCTTCC---CCSCCSCTTSCCHHHHTTCSSCCTHHHHHHHHHH
T ss_pred             H---HCCccccCCChhhEEEeCCCCeEEeccchhhhhcccCCC---ceeeeeCCCcCCHHHHcCCCCCCchhhhHHHHHH
Confidence            9   9999999999999999965 5689999999987644322   1235689999999999765 78999999999999


Q ss_pred             HHHHHhcCcccccccccCCCcccchHHHHHHHh---------hhcccCCCCCCccccCCCchh---HHHHHHHHHHHHHH
Q 044022          160 LFELLAGRIHIWDLLKDTHDHGCFFNEYLKNYL---------EDKRFTGIPAPIIVQDIPCIE---KEQQLHASAQLTLE  227 (241)
Q Consensus       160 ~~~~~~g~~p~~~~~~~~~~~~~~~~~~~~~~~---------~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~l~~~  227 (241)
                      +|+|++|+.||.....     .....+..+...         ....+.....+.+...  .+.   ....+..+.+|+.+
T Consensus       247 l~ell~G~~pf~~~~~-----~~~l~~i~~~lg~p~~~~~~~~~~~~~~~~~p~~~~~--~~~~~~~~~~~~~~~~Li~~  319 (420)
T 1j1b_A          247 LAELLLGQPIFPGDSG-----VDQLVEIIKVLGTPTREQIREMNPNYTEFKFPQIKAH--PWTKVFRPRTPPEAIALCSR  319 (420)
T ss_dssp             HHHHHHSSCSSCCSSH-----HHHHHHHHHHHCSCCHHHHHHHCSCCCCCCCCCCCCC--CHHHHSCTTSCHHHHHHHHH
T ss_pred             HHHHHhCCCCCCCCCH-----HHHHHHHHHHhCCCCHHHHHhhChhhhhhccCccCCC--CHHHhcCCCCCHHHHHHHHH
Confidence            9999999999965211     011111111100         0111111111111000  000   01123678999999


Q ss_pred             hccCCCCCCCCCCC
Q 044022          228 CVNNSPEDRPTMVD  241 (241)
Q Consensus       228 cl~~~p~~Rpt~~e  241 (241)
                      ||..||++|||+.|
T Consensus       320 ~L~~dP~~R~t~~e  333 (420)
T 1j1b_A          320 LLEYTPTARLTPLE  333 (420)
T ss_dssp             HSCSSGGGSCCHHH
T ss_pred             hccCChhHCCCHHH
Confidence            99999999999753


No 240
>1q8y_A SR protein kinase; transferase; HET: ADP ADE; 2.05A {Saccharomyces cerevisiae} SCOP: d.144.1.7 PDB: 1q8z_A 1q97_A* 1q99_A* 1how_A 2jd5_A
Probab=100.00  E-value=1.2e-36  Score=251.91  Aligned_cols=152  Identities=22%  Similarity=0.266  Sum_probs=128.9

Q ss_pred             cHHHHHHHHHHHHhcC-----------CCcccceeeeeeeCC----cceEEEEecCCCCHHHhhcCCC---c---hHHHH
Q 044022           12 TYGSCINNITYAAQMS-----------HNHILKRIGCCLQTP----IPILVFQSVEYGTLRDCIFGAP---L---PRLKI   70 (241)
Q Consensus        12 ~~~~~~~e~~~l~~l~-----------h~~iv~~~~~~~~~~----~~~lv~e~~~~~sL~~~l~~~~---~---~~~~~   70 (241)
                      ..+.+.+|++++++++           |+||+++++++...+    ..++|||++ +++|.+++....   .   ....+
T Consensus        58 ~~~~~~~e~~~l~~l~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~lv~e~~-~~~L~~~~~~~~~~~~~~~~~~~i  136 (373)
T 1q8y_A           58 YTEAAEDEIKLLQRVNDADNTKEDSMGANHILKLLDHFNHKGPNGVHVVMVFEVL-GENLLALIKKYEHRGIPLIYVKQI  136 (373)
T ss_dssp             HHHHHHHHHHHHHHHHHTCCSHHHHHHHTTBCCCCEEEEEEETTEEEEEEEECCC-CEEHHHHHHHTTTSCCCHHHHHHH
T ss_pred             chhhhhHHHHHHHHhhcccccchhccccchHHHHHHHhhccCCCCceEEEEEecC-CCCHHHHHHHhhccCCcHHHHHHH
Confidence            3567889999999986           889999999998654    789999999 799999986531   1   46789


Q ss_pred             HHHHHHHhchhhcCCCC-CceeccCCCCCeeec------CCCCeEEeeccCceecCCCCcceeecccccCCCccCccccc
Q 044022           71 ASDIVNSLAYLHFGFPR-PIVLRNFKTQNILFN------EENVAKWFDFLLSISIPEGETHITTDRVIGTRGYSAPEYIS  143 (241)
Q Consensus        71 ~~~i~~~l~~lh~~~~~-~ivh~dl~~~nil~~------~~~~~~l~df~~~~~~~~~~~~~~~~~~~~~~~~~aPE~~~  143 (241)
                      +.||+.||.|||   ++ +++||||||+|||++      ..+.+||+|||++.......     ....+|+.|+|||++.
T Consensus       137 ~~qi~~aL~~lH---~~~~ivH~Dikp~NIll~~~~~~~~~~~~kl~Dfg~a~~~~~~~-----~~~~~t~~y~aPE~~~  208 (373)
T 1q8y_A          137 SKQLLLGLDYMH---RRCGIIHTDIKPENVLMEIVDSPENLIQIKIADLGNACWYDEHY-----TNSIQTREYRSPEVLL  208 (373)
T ss_dssp             HHHHHHHHHHHH---HTTCEECSCCSGGGEEEEEEETTTTEEEEEECCCTTCEETTBCC-----CSCCSCGGGCCHHHHH
T ss_pred             HHHHHHHHHHHH---hcCCEEecCCChHHeEEeccCCCcCcceEEEcccccccccCCCC-----CCCCCCccccCcHHHh
Confidence            999999999999   77 999999999999995      34479999999997664432     2346899999999999


Q ss_pred             ccCCCcchhhHHHHHHHHHHHhcCccccc
Q 044022          144 ICVLNEKSNVFSFGAFLFELLAGRIHIWD  172 (241)
Q Consensus       144 ~~~~~~~~Di~s~G~~~~~~~~g~~p~~~  172 (241)
                      +..++.++||||||+++|+|++|..||..
T Consensus       209 ~~~~~~~~Di~slG~il~el~~g~~pf~~  237 (373)
T 1q8y_A          209 GAPWGCGADIWSTACLIFELITGDFLFEP  237 (373)
T ss_dssp             TCCCCTHHHHHHHHHHHHHHHHSSCCC--
T ss_pred             CCCCCchHhHHHHHHHHHHHHhCCCCCCC
Confidence            98999999999999999999999999965


No 241
>3e3p_A Protein kinase, putative glycogen synthase kinase; leishmaniasis, transferase; 2.00A {Leishmania major}
Probab=100.00  E-value=1e-35  Score=245.36  Aligned_cols=156  Identities=21%  Similarity=0.233  Sum_probs=126.4

Q ss_pred             cHHHHHHHHHHHHhcCCCcccceeeeeeeCCc-------ceEEEEecCCCCHHHhhc----CCCc----hHHHHHHHHHH
Q 044022           12 TYGSCINNITYAAQMSHNHILKRIGCCLQTPI-------PILVFQSVEYGTLRDCIF----GAPL----PRLKIASDIVN   76 (241)
Q Consensus        12 ~~~~~~~e~~~l~~l~h~~iv~~~~~~~~~~~-------~~lv~e~~~~~sL~~~l~----~~~~----~~~~~~~~i~~   76 (241)
                      ...++.++++.+..++||||+++++++...+.       .++||||+.+ +|...+.    ....    ....++.+++.
T Consensus        62 ~~~~~~~~~~~l~~l~h~niv~~~~~~~~~~~~~~~~~~~~lv~e~~~~-~l~~~~~~~~~~~~~~~~~~~~~~~~qi~~  140 (360)
T 3e3p_A           62 FRNRELQIMQDLAVLHHPNIVQLQSYFYTLGERDRRDIYLNVVMEYVPD-TLHRCCRNYYRRQVAPPPILIKVFLFQLIR  140 (360)
T ss_dssp             CCCHHHHHHHHHHHHCCTTBCCEEEEEEEECSSCTTCEEEEEEEECCSC-BHHHHHHHHHTTTCCCCHHHHHHHHHHHHH
T ss_pred             ccHHHHHHHHHHHhcCCCCcccHHHhhhccccccccceeEEEEeecccc-cHHHHHHHHhhcccCCCHHHHHHHHHHHHH
Confidence            34567788999999999999999999976443       7899999985 5544332    2211    45678999999


Q ss_pred             HhchhhcCCCCCceeccCCCCCeeecC-CCCeEEeeccCceecCCCCcceeecccccCCCccCccccccc-CCCcchhhH
Q 044022           77 SLAYLHFGFPRPIVLRNFKTQNILFNE-ENVAKWFDFLLSISIPEGETHITTDRVIGTRGYSAPEYISIC-VLNEKSNVF  154 (241)
Q Consensus        77 ~l~~lh~~~~~~ivh~dl~~~nil~~~-~~~~~l~df~~~~~~~~~~~~~~~~~~~~~~~~~aPE~~~~~-~~~~~~Di~  154 (241)
                      ||.|||.. +.+++||||||+|||++. ++.+||+|||++.........   ....||+.|+|||++.+. .++.++|||
T Consensus       141 al~~lH~~-~~~ivH~Dlkp~NIll~~~~~~~kl~Dfg~a~~~~~~~~~---~~~~gt~~y~aPE~~~~~~~~~~~~Di~  216 (360)
T 3e3p_A          141 SIGCLHLP-SVNVCHRDIKPHNVLVNEADGTLKLCDFGSAKKLSPSEPN---VAYICSRYYRAPELIFGNQHYTTAVDIW  216 (360)
T ss_dssp             HHHHHTST-TTCCBCSCCCGGGEEEETTTTEEEECCCTTCBCCCTTSCC---CSTTSCGGGCCHHHHTTCSSCCTHHHHH
T ss_pred             HHHHHhCC-CCCeecCcCCHHHEEEeCCCCcEEEeeCCCceecCCCCCc---ccccCCcceeCHHHHcCCCCCCcHHHHH
Confidence            99999932 678999999999999997 899999999999866543321   234689999999998765 489999999


Q ss_pred             HHHHHHHHHHhcCccccc
Q 044022          155 SFGAFLFELLAGRIHIWD  172 (241)
Q Consensus       155 s~G~~~~~~~~g~~p~~~  172 (241)
                      |||+++|+|++|+.||..
T Consensus       217 slG~il~ell~g~~pf~~  234 (360)
T 3e3p_A          217 SVGCIFAEMMLGEPIFRG  234 (360)
T ss_dssp             HHHHHHHHHHHSSCSSCC
T ss_pred             HHHHHHHHHHhCCCCcCC
Confidence            999999999999999965


No 242
>3sv0_A Casein kinase I-like; typical kinase domain fold, cytosol, transferase; 2.00A {Oryza sativa japonica group}
Probab=100.00  E-value=6.6e-36  Score=254.86  Aligned_cols=208  Identities=17%  Similarity=0.185  Sum_probs=156.0

Q ss_pred             HHHHHHHHHHHHhcCC-CcccceeeeeeeCCcceEEEEecCCCCHHHhhcCC--Cc---hHHHHHHHHHHHhchhhcCCC
Q 044022           13 YGSCINNITYAAQMSH-NHILKRIGCCLQTPIPILVFQSVEYGTLRDCIFGA--PL---PRLKIASDIVNSLAYLHFGFP   86 (241)
Q Consensus        13 ~~~~~~e~~~l~~l~h-~~iv~~~~~~~~~~~~~lv~e~~~~~sL~~~l~~~--~~---~~~~~~~~i~~~l~~lh~~~~   86 (241)
                      ..++.+|+++++.|+| +++..+..++...+..++||||+ +++|.+++...  ..   .++.++.||+.||.|||   +
T Consensus        46 ~~~~~~E~~il~~L~~~~~i~~i~~~~~~~~~~~lvme~~-g~sL~~ll~~~~~~l~~~~~~~i~~qi~~aL~yLH---~  121 (483)
T 3sv0_A           46 HPQLLYESKIYRILQGGTGIPNVRWFGVEGDYNVLVMDLL-GPSLEDLFNFCSRKLSLKTVLMLADQMINRVEFVH---S  121 (483)
T ss_dssp             SCCHHHHHHHHHHTTTSTTCCCEEEEEEETTEEEEEEECC-CCBHHHHHHHTTTCCCHHHHHHHHHHHHHHHHHHH---H
T ss_pred             cHHHHHHHHHHHHhcCCCCCCeEEEEEeeCCEEEEEEECC-CCCHHHHHHhhcCCCCHHHHHHHHHHHHHHHHHHH---H
Confidence            4468899999999987 55556666667788889999999 89999998632  22   57889999999999999   8


Q ss_pred             CCceeccCCCCCeee---cCCCCeEEeeccCceecCCCCcc-----eeecccccCCCccCcccccccCCCcchhhHHHHH
Q 044022           87 RPIVLRNFKTQNILF---NEENVAKWFDFLLSISIPEGETH-----ITTDRVIGTRGYSAPEYISICVLNEKSNVFSFGA  158 (241)
Q Consensus        87 ~~ivh~dl~~~nil~---~~~~~~~l~df~~~~~~~~~~~~-----~~~~~~~~~~~~~aPE~~~~~~~~~~~Di~s~G~  158 (241)
                      ++|+||||||+|||+   +.++.+||+|||++.........     .......||..|+|||++.+..++.++||||||+
T Consensus       122 ~gIvHrDIKP~NILl~~~~~~~~vkL~DFGla~~~~~~~~~~~~~~~~~~~~~gt~~Y~aPE~~~~~~~s~~sDvwSlGv  201 (483)
T 3sv0_A          122 KSFLHRDIKPDNFLMGLGRRANQVYIIDFGLAKKYRDTSTHQHIPYRENKNLTGTARYASVNTHLGIEQSRRDDLESLGY  201 (483)
T ss_dssp             TTEECCCCCGGGEEECCGGGTTCEEECCCTTCEECBCTTTCCBCCCCCCCCCCSCTTTCCHHHHTTCCCCHHHHHHHHHH
T ss_pred             CCEeecccCcceEEEecCCCCCeEEEEeCCcceeccCCccccccccccccccCCCccccCHHHhcCCCCChHHHHHHHHH
Confidence            999999999999999   68899999999999876543321     1122457899999999999999999999999999


Q ss_pred             HHHHHHhcCcccccccccCCCcccchHHHHHHHhhhcccCCCCCCccccCCCchhHHHHHHHHHHHHHHhccCCCCCCCC
Q 044022          159 FLFELLAGRIHIWDLLKDTHDHGCFFNEYLKNYLEDKRFTGIPAPIIVQDIPCIEKEQQLHASAQLTLECVNNSPEDRPT  238 (241)
Q Consensus       159 ~~~~~~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~cl~~~p~~Rpt  238 (241)
                      ++|+|++|+.||.......      ..+......... .... ...+..        ..+..+.+++..||+.||++||+
T Consensus       202 il~elltG~~Pf~~~~~~~------~~~~~~~i~~~~-~~~~-~~~l~~--------~~p~~l~~li~~cl~~dP~~RPs  265 (483)
T 3sv0_A          202 VLMYFLRGSLPWQGLKAGT------KKQKYEKISEKK-VATS-IEALCR--------GYPTEFASYFHYCRSLRFDDKPD  265 (483)
T ss_dssp             HHHHHHHSSCTTSSCCCSS------HHHHHHHHHHHH-HHSC-HHHHHT--------TSCHHHHHHHHHHHTCCTTCCCC
T ss_pred             HHHHHHhCCCCCccccchh------HHHHHHHHhhcc-cccc-HHHHhc--------CCcHHHHHHHHHHhcCChhhCcC
Confidence            9999999999996532211      111111111100 0000 000011        12357899999999999999999


Q ss_pred             CC
Q 044022          239 MV  240 (241)
Q Consensus       239 ~~  240 (241)
                      ++
T Consensus       266 ~~  267 (483)
T 3sv0_A          266 YS  267 (483)
T ss_dssp             HH
T ss_pred             HH
Confidence            75


No 243
>2vx3_A Dual specificity tyrosine-phosphorylation- regula kinase 1A; serine/threonine-protein kinase, minibrain homolog, nucleotide-binding, transferase; HET: PTR D15 P6G; 2.40A {Homo sapiens} PDB: 2wo6_A* 3anq_A* 3anr_A*
Probab=100.00  E-value=1.5e-35  Score=246.53  Aligned_cols=154  Identities=20%  Similarity=0.218  Sum_probs=130.7

Q ss_pred             cHHHHHHHHHHHHhcC-CC-----cccceeeeeeeCCcceEEEEecCCCCHHHhhcCCC------chHHHHHHHHHHHhc
Q 044022           12 TYGSCINNITYAAQMS-HN-----HILKRIGCCLQTPIPILVFQSVEYGTLRDCIFGAP------LPRLKIASDIVNSLA   79 (241)
Q Consensus        12 ~~~~~~~e~~~l~~l~-h~-----~iv~~~~~~~~~~~~~lv~e~~~~~sL~~~l~~~~------~~~~~~~~~i~~~l~   79 (241)
                      ...++.+|+++++.++ |+     +|+++++++...+..++||||+. ++|.+++....      .....++.|++.||.
T Consensus        93 ~~~~~~~e~~~l~~l~~~~~~~~~~iv~~~~~~~~~~~~~lv~e~~~-~~L~~~l~~~~~~~~~~~~~~~i~~qi~~al~  171 (382)
T 2vx3_A           93 FLNQAQIEVRLLELMNKHDTEMKYYIVHLKRHFMFRNHLCLVFEMLS-YNLYDLLRNTNFRGVSLNLTRKFAQQMCTALL  171 (382)
T ss_dssp             HHHHHHHHHHHHHHHHHCSSGGGGGBCCEEEEEEETTEEEEEEECCC-CBHHHHHHHTTTSCCCHHHHHHHHHHHHHHHH
T ss_pred             HHHHHHHHHHHHHHHHhcccccceeEEEeeeeeccCCceEEEEecCC-CCHHHHHhhcCcCCCCHHHHHHHHHHHHHHHH
Confidence            3566788999999885 55     48999999999999999999996 69999886542      146789999999999


Q ss_pred             hhhcCCCCCceeccCCCCCeeec--CCCCeEEeeccCceecCCCCcceeecccccCCCccCcccccccCCCcchhhHHHH
Q 044022           80 YLHFGFPRPIVLRNFKTQNILFN--EENVAKWFDFLLSISIPEGETHITTDRVIGTRGYSAPEYISICVLNEKSNVFSFG  157 (241)
Q Consensus        80 ~lh~~~~~~ivh~dl~~~nil~~--~~~~~~l~df~~~~~~~~~~~~~~~~~~~~~~~~~aPE~~~~~~~~~~~Di~s~G  157 (241)
                      |||.. +.+|+||||||+|||++  .++.+||+|||++.......     ....+|+.|+|||++.+..++.++||||||
T Consensus       172 ~lH~~-~~~ivHrDlkp~NIll~~~~~~~~kL~DFG~a~~~~~~~-----~~~~~t~~y~aPE~~~~~~~~~~~DiwSlG  245 (382)
T 2vx3_A          172 FLATP-ELSIIHCDLKPENILLCNPKRSAIKIVDFGSSCQLGQRI-----YQYIQSRFYRSPEVLLGMPYDLAIDMWSLG  245 (382)
T ss_dssp             HHTST-TTCEECCCCSGGGEEESSTTSCCEEECCCTTCEETTCCC-----CSSCSCGGGCCHHHHTTCCCCTHHHHHHHH
T ss_pred             HhccC-CCCEEcCCCCcccEEEecCCCCcEEEEeccCceeccccc-----ccccCCccccChHHHcCCCCCcHHHHHHHH
Confidence            99931 36899999999999994  47889999999998764432     335689999999999998999999999999


Q ss_pred             HHHHHHHhcCccccc
Q 044022          158 AFLFELLAGRIHIWD  172 (241)
Q Consensus       158 ~~~~~~~~g~~p~~~  172 (241)
                      +++|+|++|+.||..
T Consensus       246 ~il~elltg~~pf~~  260 (382)
T 2vx3_A          246 CILVEMHTGEPLFSG  260 (382)
T ss_dssp             HHHHHHHHSSCSSCC
T ss_pred             HHHHHHHhCCCCCCC
Confidence            999999999999965


No 244
>2dyl_A Dual specificity mitogen-activated protein kinase kinase 7; MKK7, activated mutant, ATP-binding, structural genomics, NPPSFA; 2.45A {Homo sapiens}
Probab=100.00  E-value=3.2e-36  Score=244.18  Aligned_cols=214  Identities=20%  Similarity=0.237  Sum_probs=146.7

Q ss_pred             CcccccccccccHHH-HHHHHHHHHhcCCCcccceeeeeeeCCcceEEEEecCCCCHHHhhcC--CC---chHHHHHHHH
Q 044022            1 MKFYGHEYHRHTYGS-CINNITYAAQMSHNHILKRIGCCLQTPIPILVFQSVEYGTLRDCIFG--AP---LPRLKIASDI   74 (241)
Q Consensus         1 iK~~~~~~~~~~~~~-~~~e~~~l~~l~h~~iv~~~~~~~~~~~~~lv~e~~~~~sL~~~l~~--~~---~~~~~~~~~i   74 (241)
                      ||++..........+ +.++..+++.++||||+++++++...+..++||||+ ++.+..+...  ..   .....++.++
T Consensus        55 vK~~~~~~~~~~~~~~~~~~~~~~~~~~h~~i~~~~~~~~~~~~~~lv~e~~-~~~~~~l~~~~~~~~~~~~~~~~~~~i  133 (318)
T 2dyl_A           55 VKQMRRSGNKEENKRILMDLDVVLKSHDCPYIVQCFGTFITNTDVFIAMELM-GTCAEKLKKRMQGPIPERILGKMTVAI  133 (318)
T ss_dssp             EEEEETTSCHHHHHHHHHHHHHHHHTTTCTTBCCEEEEEECSSEEEEEECCC-SEEHHHHHHHHTSCCCHHHHHHHHHHH
T ss_pred             EEEecccccchHHHHHHHHHHHHHHhcCCCceeeEEEEEecCCcEEEEEecc-CCcHHHHHHHhccCCCHHHHHHHHHHH
Confidence            355544333223333 444556788889999999999999999999999999 5666665542  11   2467899999


Q ss_pred             HHHhchhhcCCCC-CceeccCCCCCeeecCCCCeEEeeccCceecCCCCcceeecccccCCCccCccccc-----ccCCC
Q 044022           75 VNSLAYLHFGFPR-PIVLRNFKTQNILFNEENVAKWFDFLLSISIPEGETHITTDRVIGTRGYSAPEYIS-----ICVLN  148 (241)
Q Consensus        75 ~~~l~~lh~~~~~-~ivh~dl~~~nil~~~~~~~~l~df~~~~~~~~~~~~~~~~~~~~~~~~~aPE~~~-----~~~~~  148 (241)
                      +.||.|||   +. +++|+||||+||+++.++.++|+|||.+........   .....+++.|+|||.+.     ...++
T Consensus       134 ~~~l~~lH---~~~~i~H~dlkp~Nil~~~~~~~kl~dfg~~~~~~~~~~---~~~~~~~~~y~aPE~~~~~~~~~~~~~  207 (318)
T 2dyl_A          134 VKALYYLK---EKHGVIHRDVKPSNILLDERGQIKLCDFGISGRLVDDKA---KDRSAGCAAYMAPERIDPPDPTKPDYD  207 (318)
T ss_dssp             HHHHHHHH---HHHCCCCCCCCGGGEEECTTSCEEECCCTTC-----------------CCTTCCHHHHC--------CC
T ss_pred             HHHHHHHH---hhCCEEeCCCCHHHEEECCCCCEEEEECCCchhccCCcc---ccccCCCccccChhhcccccccccCCc
Confidence            99999999   75 999999999999999999999999999876543321   12346889999999984     45678


Q ss_pred             cchhhHHHHHHHHHHHhcCcccccccccCCCcccchHHHHHHHhhhcccCCCCCCccccCCCchhHHHHHHHHHHHHHHh
Q 044022          149 EKSNVFSFGAFLFELLAGRIHIWDLLKDTHDHGCFFNEYLKNYLEDKRFTGIPAPIIVQDIPCIEKEQQLHASAQLTLEC  228 (241)
Q Consensus       149 ~~~Di~s~G~~~~~~~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~c  228 (241)
                      .++||||||+++|+|++|+.||.....        ..+......... ....+.   ..        ..+..+.+++.+|
T Consensus       208 ~~~Di~slG~il~~l~~g~~pf~~~~~--------~~~~~~~~~~~~-~~~~~~---~~--------~~~~~l~~li~~~  267 (318)
T 2dyl_A          208 IRADVWSLGISLVELATGQFPYKNCKT--------DFEVLTKVLQEE-PPLLPG---HM--------GFSGDFQSFVKDC  267 (318)
T ss_dssp             THHHHHHHHHHHHHHHHSSCTTTTCCS--------HHHHHHHHHHSC-CCCCCS---SS--------CCCHHHHHHHHHH
T ss_pred             cccchhhHHHHHHHHHhCCCCCCCCCc--------cHHHHHHHhccC-CCCCCc---cC--------CCCHHHHHHHHHH
Confidence            899999999999999999999954111        111222221111 111111   01        1125788999999


Q ss_pred             ccCCCCCCCCCCC
Q 044022          229 VNNSPEDRPTMVD  241 (241)
Q Consensus       229 l~~~p~~Rpt~~e  241 (241)
                      |+.||.+|||++|
T Consensus       268 l~~dp~~Rps~~~  280 (318)
T 2dyl_A          268 LTKDHRKRPKYNK  280 (318)
T ss_dssp             TCSCTTTSCCHHH
T ss_pred             ccCChhHCcCHHH
Confidence            9999999999753


No 245
>2pzi_A Probable serine/threonine-protein kinase PKNG; ATP-recognition, kinase-INH complex, rubredoxin fold, TPR domain, transferase; HET: AXX; 2.40A {Mycobacterium tuberculosis}
Probab=100.00  E-value=2.9e-36  Score=267.58  Aligned_cols=199  Identities=20%  Similarity=0.245  Sum_probs=155.5

Q ss_pred             CcccccccccccHHHHHHHHHHHHhcCCCcccceeeeeeeCCc-----ceEEEEecCCCCHHHhhcCCCc--hHHHHHHH
Q 044022            1 MKFYGHEYHRHTYGSCINNITYAAQMSHNHILKRIGCCLQTPI-----PILVFQSVEYGTLRDCIFGAPL--PRLKIASD   73 (241)
Q Consensus         1 iK~~~~~~~~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~~~~~-----~~lv~e~~~~~sL~~~l~~~~~--~~~~~~~~   73 (241)
                      ||++...........+.+|++++++++||||+++++++...+.     .|+||||+++++|.+++...-.  .++.++.+
T Consensus       111 iK~~~~~~~~~~~~~~~~E~~~l~~l~hp~iv~~~~~~~~~~~~~~~~~~lv~E~~~g~~L~~~~~~~l~~~~~~~~~~q  190 (681)
T 2pzi_A          111 LKGLVHSGDAEAQAMAMAERQFLAEVVHPSIVQIFNFVEHTDRHGDPVGYIVMEYVGGQSLKRSKGQKLPVAEAIAYLLE  190 (681)
T ss_dssp             EEESCSSCCHHHHHHHHHHHGGGGGCCCTTBCCEEEEEEEECTTSCEEEEEEEECCCCEECC----CCCCHHHHHHHHHH
T ss_pred             EEEeCccCCHHHHHHHHHHHHHHHhcCCCCcCeEeeeEeecCCCCCceeEEEEEeCCCCcHHHHHhCCCCHHHHHHHHHH
Confidence            3555443334456678999999999999999999999987665     6999999999999988765322  57789999


Q ss_pred             HHHHhchhhcCCCCCceeccCCCCCeeecCCCCeEEeeccCceecCCCCcceeecccccCCCccCcccccccCCCcchhh
Q 044022           74 IVNSLAYLHFGFPRPIVLRNFKTQNILFNEENVAKWFDFLLSISIPEGETHITTDRVIGTRGYSAPEYISICVLNEKSNV  153 (241)
Q Consensus        74 i~~~l~~lh~~~~~~ivh~dl~~~nil~~~~~~~~l~df~~~~~~~~~~~~~~~~~~~~~~~~~aPE~~~~~~~~~~~Di  153 (241)
                      |+.||.|||   +++|+||||||+|||++.+ .+||+|||++......      ....||+.|+|||++.+.. +.++||
T Consensus       191 i~~aL~~lH---~~giiHrDlkp~NIll~~~-~~kl~DFG~a~~~~~~------~~~~gt~~y~aPE~~~~~~-~~~sDi  259 (681)
T 2pzi_A          191 ILPALSYLH---SIGLVYNDLKPENIMLTEE-QLKLIDLGAVSRINSF------GYLYGTPGFQAPEIVRTGP-TVATDI  259 (681)
T ss_dssp             HHHHHHHHH---HTTEECCCCSGGGEEECSS-CEEECCCTTCEETTCC------SCCCCCTTTSCTTHHHHCS-CHHHHH
T ss_pred             HHHHHHHHH---HCCCeecccChHHeEEeCC-cEEEEecccchhcccC------CccCCCccccCHHHHcCCC-CCceeh
Confidence            999999999   8999999999999999985 8999999999876543      3346899999999987654 889999


Q ss_pred             HHHHHHHHHHHhcCcccccccccCCCcccchHHHHHHHhhhcccCCCCCCccccCCCchhHHHHHHHHHHHHHHhccCCC
Q 044022          154 FSFGAFLFELLAGRIHIWDLLKDTHDHGCFFNEYLKNYLEDKRFTGIPAPIIVQDIPCIEKEQQLHASAQLTLECVNNSP  233 (241)
Q Consensus       154 ~s~G~~~~~~~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~cl~~~p  233 (241)
                      ||||+++|+|++|..||......                      ....     .   ......+..+.+++.+||+.||
T Consensus       260 ~slG~~l~~l~~g~~~~~~~~~~----------------------~~~~-----~---~~~~~~~~~l~~li~~~l~~dP  309 (681)
T 2pzi_A          260 YTVGRTLAALTLDLPTRNGRYVD----------------------GLPE-----D---DPVLKTYDSYGRLLRRAIDPDP  309 (681)
T ss_dssp             HHHHHHHHHHHSCCCEETTEECS----------------------SCCT-----T---CHHHHHCHHHHHHHHHHTCSSG
T ss_pred             hhhHHHHHHHHhCCCCCcccccc----------------------cccc-----c---ccccccCHHHHHHHhhhccCCh
Confidence            99999999999999888541110                      0000     0   0111234678899999999999


Q ss_pred             CCCCCCC
Q 044022          234 EDRPTMV  240 (241)
Q Consensus       234 ~~Rpt~~  240 (241)
                      ++|||..
T Consensus       310 ~~R~~~~  316 (681)
T 2pzi_A          310 RQRFTTA  316 (681)
T ss_dssp             GGSCSSH
T ss_pred             hhCCCHH
Confidence            9999863


No 246
>2iwi_A Serine/threonine-protein kinase PIM-2; nucleotide-binding, cancer, leukemia, transferase, ATP-binding, proto- oncogene, phosphorylation; HET: HB1; 2.80A {Homo sapiens}
Probab=100.00  E-value=2.9e-36  Score=244.09  Aligned_cols=192  Identities=22%  Similarity=0.331  Sum_probs=150.0

Q ss_pred             HHHHHHHHHHHHhc----CCCcccceeeeeeeCCcceEEEEe-cCCCCHHHhhcCCC----chHHHHHHHHHHHhchhhc
Q 044022           13 YGSCINNITYAAQM----SHNHILKRIGCCLQTPIPILVFQS-VEYGTLRDCIFGAP----LPRLKIASDIVNSLAYLHF   83 (241)
Q Consensus        13 ~~~~~~e~~~l~~l----~h~~iv~~~~~~~~~~~~~lv~e~-~~~~sL~~~l~~~~----~~~~~~~~~i~~~l~~lh~   83 (241)
                      ...+.+|+.++.++    +||||+++++++...+..++|+|+ +.+++|.+++....    .....++.+++.||.||| 
T Consensus        78 ~~~~~~e~~~l~~l~~~~~h~~i~~~~~~~~~~~~~~~v~e~~~~~~~L~~~l~~~~~~~~~~~~~~~~qi~~~l~~lH-  156 (312)
T 2iwi_A           78 SVTCPLEVALLWKVGAGGGHPGVIRLLDWFETQEGFMLVLERPLPAQDLFDYITEKGPLGEGPSRCFFGQVVAAIQHCH-  156 (312)
T ss_dssp             -CCCCHHHHHHHHHHSSCCCSSBCCEEEEC-----CEEEEECCSSEEEHHHHHHHHCSCCHHHHHHHHHHHHHHHHHHH-
T ss_pred             hHHHHHHHHHHHhhcccCCCCCeeeEEEEEecCCeEEEEEEecCCCCCHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHH-
Confidence            44567899999999    899999999999999999999999 78899999986532    256789999999999999 


Q ss_pred             CCCCCceeccCCCCCeeec-CCCCeEEeeccCceecCCCCcceeecccccCCCccCcccccccCCC-cchhhHHHHHHHH
Q 044022           84 GFPRPIVLRNFKTQNILFN-EENVAKWFDFLLSISIPEGETHITTDRVIGTRGYSAPEYISICVLN-EKSNVFSFGAFLF  161 (241)
Q Consensus        84 ~~~~~ivh~dl~~~nil~~-~~~~~~l~df~~~~~~~~~~~~~~~~~~~~~~~~~aPE~~~~~~~~-~~~Di~s~G~~~~  161 (241)
                        +.+++|+||||+||+++ .++.++|+|||.+........    ....++..|+|||++.+..+. .++||||||+++|
T Consensus       157 --~~~i~H~dlkp~Nil~~~~~~~~kl~dfg~~~~~~~~~~----~~~~~~~~y~aPE~~~~~~~~~~~~Di~slG~il~  230 (312)
T 2iwi_A          157 --SRGVVHRDIKDENILIDLRRGCAKLIDFGSGALLHDEPY----TDFDGTRVYSPPEWISRHQYHALPATVWSLGILLY  230 (312)
T ss_dssp             --HHTEECCCCSGGGEEEETTTTEEEECCCSSCEECCSSCB----CCCCSCTTTSCHHHHHHSCBCHHHHHHHHHHHHHH
T ss_pred             --HCCeeecCCChhhEEEeCCCCeEEEEEcchhhhcccCcc----cccCCcccccCceeeecCCCCCccchHHHHHHHHH
Confidence              89999999999999999 889999999999987654322    334688999999998876664 5899999999999


Q ss_pred             HHHhcCcccccccccCCCcccchHHHHHHHhhhcccCCCCCCccccCCCchhHHHHHHHHHHHHHHhccCCCCCCCCCCC
Q 044022          162 ELLAGRIHIWDLLKDTHDHGCFFNEYLKNYLEDKRFTGIPAPIIVQDIPCIEKEQQLHASAQLTLECVNNSPEDRPTMVD  241 (241)
Q Consensus       162 ~~~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~cl~~~p~~Rpt~~e  241 (241)
                      +|++|+.||....               .... ... .     +..        ..+..+.+++.+||+.||++|||++|
T Consensus       231 ~l~~g~~pf~~~~---------------~~~~-~~~-~-----~~~--------~~~~~~~~li~~~l~~~p~~Rps~~e  280 (312)
T 2iwi_A          231 DMVCGDIPFERDQ---------------EILE-AEL-H-----FPA--------HVSPDCCALIRRCLAPKPSSRPSLEE  280 (312)
T ss_dssp             HHHHSSCSCCSHH---------------HHHH-TCC-C-----CCT--------TSCHHHHHHHHHHTCSSTTTSCCHHH
T ss_pred             HHHHCCCCCCChH---------------HHhh-hcc-C-----Ccc--------cCCHHHHHHHHHHccCChhhCcCHHH
Confidence            9999999995411               0000 100 0     111        12256889999999999999999853


No 247
>3uqc_A Probable conserved transmembrane protein; structural genomics, TB structural genomics consortium, TBSG fold, FHAA, transferase; 2.26A {Mycobacterium tuberculosis} PDB: 3oun_B* 3otv_A 3ouk_A
Probab=100.00  E-value=1.2e-34  Score=232.04  Aligned_cols=189  Identities=10%  Similarity=0.079  Sum_probs=143.1

Q ss_pred             Ccccccccc--cccHHHHHHHHHHHHhcCCCcccceeeeeeeCCcceEEEEecCCCCHHHhhcCCCc--hHHHHHHHHHH
Q 044022            1 MKFYGHEYH--RHTYGSCINNITYAAQMSHNHILKRIGCCLQTPIPILVFQSVEYGTLRDCIFGAPL--PRLKIASDIVN   76 (241)
Q Consensus         1 iK~~~~~~~--~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~~~~~~~lv~e~~~~~sL~~~l~~~~~--~~~~~~~~i~~   76 (241)
                      ||++.....  ....+.+.+|++++.+++||||+++++++...+..|+||||+++++|.+++.....  ....++.|++.
T Consensus        61 vK~~~~~~~~~~~~~~~~~~e~~~l~~l~hp~iv~~~~~~~~~~~~~lv~e~~~g~~L~~~l~~~~~~~~~~~i~~ql~~  140 (286)
T 3uqc_A           61 LTFVDPQGVLPDDVLQETLSRTLRLSRIDKPGVARVLDVVHTRAGGLVVAEWIRGGSLQEVADTSPSPVGAIRAMQSLAA  140 (286)
T ss_dssp             EEESCTTCCSCHHHHHHHHHHHHHHHTCCCTTBCCEEEEEEETTEEEEEEECCCEEEHHHHHTTCCCHHHHHHHHHHHHH
T ss_pred             EEEECcccccCHHHHHHHHHHHHHHhcCCCCCcceeeEEEEECCcEEEEEEecCCCCHHHHHhcCCChHHHHHHHHHHHH
Confidence            456654433  23457899999999999999999999999999999999999999999999976543  46789999999


Q ss_pred             HhchhhcCCCCCceeccCCCCCeeecCCCCeEEeeccCceecCCCCcceeecccccCCCccCcccccccCCCcchhhHHH
Q 044022           77 SLAYLHFGFPRPIVLRNFKTQNILFNEENVAKWFDFLLSISIPEGETHITTDRVIGTRGYSAPEYISICVLNEKSNVFSF  156 (241)
Q Consensus        77 ~l~~lh~~~~~~ivh~dl~~~nil~~~~~~~~l~df~~~~~~~~~~~~~~~~~~~~~~~~~aPE~~~~~~~~~~~Di~s~  156 (241)
                      ||.|||   +++++||||||+|||++.++.++|++++                      |++       .++.++|||||
T Consensus       141 aL~~lH---~~givH~Dikp~NIll~~~g~~kl~~~~----------------------~~~-------~~~~~~Di~sl  188 (286)
T 3uqc_A          141 AADAAH---RAGVALSIDHPSRVRVSIDGDVVLAYPA----------------------TMP-------DANPQDDIRGI  188 (286)
T ss_dssp             HHHHHH---HTTCCCCCCSGGGEEEETTSCEEECSCC----------------------CCT-------TCCHHHHHHHH
T ss_pred             HHHHHH---HCCCccCCCCcccEEEcCCCCEEEEecc----------------------ccC-------CCCchhHHHHH
Confidence            999999   8999999999999999999999988543                      222       26789999999


Q ss_pred             HHHHHHHHhcCcccccccccCCCcccchHHHHHHHhhhcccCCCCC--CccccCCCchhHHHHHHHHHHHHHHhccCCCC
Q 044022          157 GAFLFELLAGRIHIWDLLKDTHDHGCFFNEYLKNYLEDKRFTGIPA--PIIVQDIPCIEKEQQLHASAQLTLECVNNSPE  234 (241)
Q Consensus       157 G~~~~~~~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~l~~~cl~~~p~  234 (241)
                      |+++|+|++|+.||...........           ..........  .....        ..+..+.+++.+||+.||+
T Consensus       189 G~il~elltg~~Pf~~~~~~~~~~~-----------~~~~~~~~~~~~~~~~~--------~~~~~l~~li~~~l~~dP~  249 (286)
T 3uqc_A          189 GASLYALLVNRWPLPEAGVRSGLAP-----------AERDTAGQPIEPADIDR--------DIPFQISAVAARSVQGDGG  249 (286)
T ss_dssp             HHHHHHHHHSEECSCCCSBCCCSEE-----------CCBCTTSCBCCHHHHCT--------TSCHHHHHHHHHHHCTTSS
T ss_pred             HHHHHHHHHCCCCCCcCCcchhhHH-----------HHHHhccCCCChhhccc--------CCCHHHHHHHHHHcccCCc
Confidence            9999999999999965322110000           0000000000  00111        2236789999999999999


Q ss_pred             CCCCCCC
Q 044022          235 DRPTMVD  241 (241)
Q Consensus       235 ~Rpt~~e  241 (241)
                      +| |++|
T Consensus       250 ~R-s~~e  255 (286)
T 3uqc_A          250 IR-SAST  255 (286)
T ss_dssp             CC-CHHH
T ss_pred             cC-CHHH
Confidence            99 8753


No 248
>3m2w_A MAP kinase-activated protein kinase 2; small molecule inhibitor, spiroazetidine-tetracycle, ATP-SIT inhibitor, novartis compound NVP-BXS169; HET: L8I; 2.41A {Homo sapiens} PDB: 3kga_A* 3m42_A*
Probab=100.00  E-value=4.2e-34  Score=230.19  Aligned_cols=186  Identities=17%  Similarity=0.237  Sum_probs=139.2

Q ss_pred             HHHHHHHHHHH-HhcCCCcccceeeeeee----CCcceEEEEecCCCCHHHhhcCCC---c---hHHHHHHHHHHHhchh
Q 044022           13 YGSCINNITYA-AQMSHNHILKRIGCCLQ----TPIPILVFQSVEYGTLRDCIFGAP---L---PRLKIASDIVNSLAYL   81 (241)
Q Consensus        13 ~~~~~~e~~~l-~~l~h~~iv~~~~~~~~----~~~~~lv~e~~~~~sL~~~l~~~~---~---~~~~~~~~i~~~l~~l   81 (241)
                      ...+.+|+.++ +.++||||+++++++..    .+..++||||+++++|.+++....   .   ....++.+++.||.||
T Consensus        54 ~~~~~~e~~~~~~~~~h~~i~~~~~~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~i~~qi~~~l~~l  133 (299)
T 3m2w_A           54 CPKARREVELHWRASQCPHIVRIVDVYENLYAGRKCLLIVMECLDGGELFSRIQDRGDQAFTEREASEIMKSIGEAIQYL  133 (299)
T ss_dssp             SHHHHHHHHHHHHHTTSTTBCCEEEEEEEEETTEEEEEEEECCCCSCBHHHHHHHCTTCCCBHHHHHHHHHHHHHHHHHH
T ss_pred             cHHHHHHHHHHHHhccCCCchhHHhhhhhhcCCCceEEEEEeecCCCcHHHHHHhccCCCCCHHHHHHHHHHHHHHHHHH
Confidence            45678899998 55599999999999987    667899999999999999986542   2   4678999999999999


Q ss_pred             hcCCCCCceeccCCCCCeeecC---CCCeEEeeccCceecCCCCcceeecccccCCCccCcccccccCCCcchhhHHHHH
Q 044022           82 HFGFPRPIVLRNFKTQNILFNE---ENVAKWFDFLLSISIPEGETHITTDRVIGTRGYSAPEYISICVLNEKSNVFSFGA  158 (241)
Q Consensus        82 h~~~~~~ivh~dl~~~nil~~~---~~~~~l~df~~~~~~~~~~~~~~~~~~~~~~~~~aPE~~~~~~~~~~~Di~s~G~  158 (241)
                      |   +.+++||||||+||+++.   ++.++|+|||++.....                        ..++.++||||||+
T Consensus       134 H---~~~i~H~dlkp~Nil~~~~~~~~~~kl~Dfg~a~~~~~------------------------~~~~~~~DiwslG~  186 (299)
T 3m2w_A          134 H---SINIAHRDVKPENLLYTSKRPNAILKLTDFGFAKETTG------------------------EKYDKSCDMWSLGV  186 (299)
T ss_dssp             H---HTTEECCCCSGGGEEESSSSTTCCEEECCCTTCEECTT------------------------CGGGGHHHHHHHHH
T ss_pred             H---hCCcccCCCCHHHEEEecCCCCCcEEEecccccccccc------------------------ccCCchhhHHHHHH
Confidence            9   899999999999999998   78999999998864321                        34678999999999


Q ss_pred             HHHHHHhcCcccccccccCCCcccchHHHHHHHhhhcccCCCCCCccccCCCchhHHHHHHHHHHHHHHhccCCCCCCCC
Q 044022          159 FLFELLAGRIHIWDLLKDTHDHGCFFNEYLKNYLEDKRFTGIPAPIIVQDIPCIEKEQQLHASAQLTLECVNNSPEDRPT  238 (241)
Q Consensus       159 ~~~~~~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~cl~~~p~~Rpt  238 (241)
                      ++|+|++|..||........              ...........  ....+.......+..+.+++.+||+.||++|||
T Consensus       187 il~el~tg~~pf~~~~~~~~--------------~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~li~~~l~~dP~~Rps  250 (299)
T 3m2w_A          187 IMYILLCGYPPFYSNHGLAI--------------SPGMKTRIRMG--QYEFPNPEWSEVSEEVKMLIRNLLKTEPTQRMT  250 (299)
T ss_dssp             HHHHHHHSSCSCCC---------------------CCSCCSSCTT--CCSSCHHHHTTSCHHHHHHHHHHTCSSTTTSCC
T ss_pred             HHHHHHHCCCCCCCCcchhh--------------hHHHHHHHhhc--cccCCchhcccCCHHHHHHHHHHcccChhhCCC
Confidence            99999999999965211100              00000000000  001111111233467999999999999999999


Q ss_pred             CCC
Q 044022          239 MVD  241 (241)
Q Consensus       239 ~~e  241 (241)
                      ++|
T Consensus       251 ~~e  253 (299)
T 3m2w_A          251 ITE  253 (299)
T ss_dssp             HHH
T ss_pred             HHH
Confidence            853


No 249
>3dzo_A Rhoptry kinase domain; parasitic disease, transferase, structural genomics, structural genomics consortium, SGC; 1.80A {Toxoplasma gondii}
Probab=100.00  E-value=1.3e-33  Score=237.08  Aligned_cols=192  Identities=13%  Similarity=0.138  Sum_probs=139.5

Q ss_pred             ccHHHHHHHHHHHHhcCC-Ccccceeee---------------------eee-----CCcceEEEEecCCCCHHHhhc--
Q 044022           11 HTYGSCINNITYAAQMSH-NHILKRIGC---------------------CLQ-----TPIPILVFQSVEYGTLRDCIF--   61 (241)
Q Consensus        11 ~~~~~~~~e~~~l~~l~h-~~iv~~~~~---------------------~~~-----~~~~~lv~e~~~~~sL~~~l~--   61 (241)
                      ...+.+.+|+.+++.++| +|...+..+                     +..     ....+++|+.+ +++|.+++.  
T Consensus       120 ~~~~~~~~E~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~L~~ll~~l  198 (413)
T 3dzo_A          120 NAIKQMKEEVLRLRLLRGIKNQKQAKVHLRFIFPFDLVKDPQKKKMIRVRLDERDMWVLSRFFLYPRM-QSNLQTFGEVL  198 (413)
T ss_dssp             -CCHHHHHHHHGGGGSTTCCSHHHHHHHTCBCCCCEEEECCC---------------CCSEEEEEECC-SEEHHHHHHHH
T ss_pred             HHHHHHHHHHHHHHhhccCCCHHHHHHhcccccchhhcccCCCCccccccCCCccccccceEEEeehh-cCCHHHHHHHh
Confidence            457789999999999987 332211111                     111     12456777766 589999884  


Q ss_pred             ----CCCc-----hHHHHHHHHHHHhchhhcCCCCCceeccCCCCCeeecCCCCeEEeeccCceecCCCCcceeeccccc
Q 044022           62 ----GAPL-----PRLKIASDIVNSLAYLHFGFPRPIVLRNFKTQNILFNEENVAKWFDFLLSISIPEGETHITTDRVIG  132 (241)
Q Consensus        62 ----~~~~-----~~~~~~~~i~~~l~~lh~~~~~~ivh~dl~~~nil~~~~~~~~l~df~~~~~~~~~~~~~~~~~~~~  132 (241)
                          ....     .++.++.|++.||.|||   +++|+||||||+|||++.++.+||+|||++......     .....|
T Consensus       199 ~~~~~~~~~l~~~~~~~i~~qi~~aL~~LH---~~~iiHrDiKp~NILl~~~~~~kL~DFG~a~~~~~~-----~~~~~g  270 (413)
T 3dzo_A          199 LSHSSTHKSLVHHARLQLTLQVIRLLASLH---HYGLVHTYLRPVDIVLDQRGGVFLTGFEHLVRDGAS-----AVSPIG  270 (413)
T ss_dssp             HHHTTTSHHHHHHHHHHHHHHHHHHHHHHH---HTTEECSCCCGGGEEECTTCCEEECCGGGCEETTEE-----ECCCCC
T ss_pred             hcccccCCCCCHHHHHHHHHHHHHHHHHHH---hCCcccCCcccceEEEecCCeEEEEeccceeecCCc-----cccCCC
Confidence                1111     45678899999999999   899999999999999999999999999998764432     234467


Q ss_pred             CCCccCcccc----------cccCCCcchhhHHHHHHHHHHHhcCcccccccccCCCcccchHHHHHHHhhhcccCCCCC
Q 044022          133 TRGYSAPEYI----------SICVLNEKSNVFSFGAFLFELLAGRIHIWDLLKDTHDHGCFFNEYLKNYLEDKRFTGIPA  202 (241)
Q Consensus       133 ~~~~~aPE~~----------~~~~~~~~~Di~s~G~~~~~~~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  202 (241)
                       +.|+|||++          ....++.++||||||+++|+|++|+.||.........              ...+...  
T Consensus       271 -~~y~aPE~~~~~~~~~~~~~~~~~~~~~DvwSlGvil~elltg~~Pf~~~~~~~~~--------------~~~~~~~--  333 (413)
T 3dzo_A          271 -RGFAPPETTAERMLPFGQHHPTLMTFAFDTWTLGLAIYWIWCADLPNTDDAALGGS--------------EWIFRSC--  333 (413)
T ss_dssp             -TTTCCHHHHHHHTSTTGGGCCEEECHHHHHHHHHHHHHHHHHSSCCCCTTGGGSCS--------------GGGGSSC--
T ss_pred             -CceeCchhhhccccccccccCcCCCchhhHHHHHHHHHHHHHCCCCCCCcchhhhH--------------HHHHhhc--
Confidence             899999999          5556788999999999999999999999653211100              0000000  


Q ss_pred             CccccCCCchhHHHHHHHHHHHHHHhccCCCCCCCCCC
Q 044022          203 PIIVQDIPCIEKEQQLHASAQLTLECVNNSPEDRPTMV  240 (241)
Q Consensus       203 ~~~~~~~~~~~~~~~~~~~~~l~~~cl~~~p~~Rpt~~  240 (241)
                          ...        ++.+.+|+.+||+.||++|||+.
T Consensus       334 ----~~~--------~~~~~~li~~~l~~dP~~Rpt~~  359 (413)
T 3dzo_A          334 ----KNI--------PQPVRALLEGFLRYPKEDRLLPL  359 (413)
T ss_dssp             ----CCC--------CHHHHHHHHHHTCSSGGGSCCHH
T ss_pred             ----ccC--------CHHHHHHHHHHccCChhhCcCHH
Confidence                011        25789999999999999999964


No 250
>2vuw_A Serine/threonine-protein kinase haspin; cell cycle, transferase, CAsp8, nucleotide binding; HET: MSE 5ID MPD; 1.80A {Homo sapiens} PDB: 3f2n_A* 3e7v_A* 3dlz_A* 3fmd_A* 3iq7_A* 2wb8_A
Probab=99.98  E-value=8.6e-34  Score=231.93  Aligned_cols=195  Identities=12%  Similarity=0.049  Sum_probs=142.1

Q ss_pred             ccHHHHHHHHHHHHhcC--------------------------CCcccceeeeeee-------------CCcceEEEEec
Q 044022           11 HTYGSCINNITYAAQMS--------------------------HNHILKRIGCCLQ-------------TPIPILVFQSV   51 (241)
Q Consensus        11 ~~~~~~~~e~~~l~~l~--------------------------h~~iv~~~~~~~~-------------~~~~~lv~e~~   51 (241)
                      ...+.+.+|+.+++.++                          ||||+++++++..             .+..++||||+
T Consensus        65 ~~~~~~~~E~~~l~~l~~l~~~~~~~h~niv~l~~~~~~~~~~hp~iv~~~~~~~~~~~~~~~~~~~~~~~~~~lv~E~~  144 (336)
T 2vuw_A           65 KTFEEILPEIIISKELSLLSGEVCNRTEGFIGLNSVHCVQGSYPPLLLKAWDHYNSTKGSANDRPDFFKDDQLFIVLEFE  144 (336)
T ss_dssp             BCHHHHHHHHHHHHHHHHGGGCSSSBCCCBCCEEEEEEEESSCCHHHHHHHHHHHHHTCCSSCCSCCCCTTCEEEEEEEE
T ss_pred             hhHHHHHHHHHHHHHHHHhhccccccCCchhhhcceeEecCCCcHHHHHHHHHHhhhccccccCccccccCeEEEEEEec
Confidence            44588999999999996                          4555555555543             67899999999


Q ss_pred             CCCCHHHhhcCCCc---hHHHHHHHHHHHhchhhcCCCCCceeccCCCCCeeecCCC--------------------CeE
Q 044022           52 EYGTLRDCIFGAPL---PRLKIASDIVNSLAYLHFGFPRPIVLRNFKTQNILFNEEN--------------------VAK  108 (241)
Q Consensus        52 ~~~sL~~~l~~~~~---~~~~~~~~i~~~l~~lh~~~~~~ivh~dl~~~nil~~~~~--------------------~~~  108 (241)
                      ++|++.+.+.....   ....++.||+.||.|||.  +.+|+||||||+|||++.++                    .+|
T Consensus       145 ~~g~ll~~~~~~~~~~~~~~~i~~qi~~aL~~lH~--~~~ivHrDlKp~NILl~~~~~~~~~~~~~~~~~~~~~~~~~vk  222 (336)
T 2vuw_A          145 FGGIDLEQMRTKLSSLATAKSILHQLTASLAVAEA--SLRFEHRDLHWGNVLLKKTSLKKLHYTLNGKSSTIPSCGLQVS  222 (336)
T ss_dssp             CCCEETGGGTTTCCCHHHHHHHHHHHHHHHHHHHH--HHCCBCSCCCGGGEEEEECSCSEEEEEETTEEEEEECTTEEEE
T ss_pred             CCCccHHHHHhcCCCHHHHHHHHHHHHHHHHHHHH--hCCEeECCCCHHHEEEeccCCcceeeeccCccccccCCCceEE
Confidence            99976666644322   567899999999999993  37899999999999999887                    899


Q ss_pred             EeeccCceecCCCCcceeecccccCCCccCcccccccCCCcchhhHHHHHH-HHHHHhcCcccccccccCCCcccchHH-
Q 044022          109 WFDFLLSISIPEGETHITTDRVIGTRGYSAPEYISICVLNEKSNVFSFGAF-LFELLAGRIHIWDLLKDTHDHGCFFNE-  186 (241)
Q Consensus       109 l~df~~~~~~~~~~~~~~~~~~~~~~~~~aPE~~~~~~~~~~~Di~s~G~~-~~~~~~g~~p~~~~~~~~~~~~~~~~~-  186 (241)
                      |+|||+++.....       ...||+.|+|||++.+.. +.++||||++.+ .+++++|..||...         .+.. 
T Consensus       223 L~DFG~a~~~~~~-------~~~gt~~y~aPE~~~g~~-~~~~Diwsl~~~~~~~~~~g~~p~~~~---------~~~~~  285 (336)
T 2vuw_A          223 IIDYTLSRLERDG-------IVVFCDVSMDEDLFTGDG-DYQFDIYRLMKKENNNRWGEYHPYSNV---------LWLHY  285 (336)
T ss_dssp             ECCCTTCBEEETT-------EEECCCCTTCSGGGCCCS-SHHHHHHHHHHHHHTTCTTSCCTHHHH---------HHHHH
T ss_pred             EeeccccEecCCC-------cEEEeecccChhhhcCCC-ccceehhhhhCCCCcccccccCCCcch---------hhhhH
Confidence            9999999865432       236899999999998766 899999998766 77888999998431         0101 


Q ss_pred             HHHHHhhhcccCCCCCCccccCCCchhHHHHHHHHHHHHHHhccCC
Q 044022          187 YLKNYLEDKRFTGIPAPIIVQDIPCIEKEQQLHASAQLTLECVNNS  232 (241)
Q Consensus       187 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~cl~~~  232 (241)
                      .............        ..........++.+.+|+.+||+.|
T Consensus       286 ~~~~~~~~~~~~~--------~~~~~~~~~~s~~~~dli~~~L~~d  323 (336)
T 2vuw_A          286 LTDKMLKQMTFKT--------KCNTPAMKQIKRKIQEFHRTMLNFS  323 (336)
T ss_dssp             HHHHHHHTCCCSS--------CCCSHHHHHHHHHHHHHHHHGGGSS
T ss_pred             HHHhhhhhhccCc--------ccchhhhhhcCHHHHHHHHHHhccC
Confidence            1111111111111        1111223467788999999999987


No 251
>4azs_A Methyltransferase WBDD; kinase; HET: AMP SAM; 2.15A {Escherichia coli} PDB: 4azt_A* 4azv_A* 4azw_A*
Probab=99.97  E-value=3.7e-33  Score=242.26  Aligned_cols=154  Identities=15%  Similarity=0.082  Sum_probs=117.6

Q ss_pred             ccHHHHHHHHHHHHhc-CCCcccceeeeeeeCCcceEEEEecCCCCHHHhhcCCC-chHHHHHHHHHHHhchhhcCCCCC
Q 044022           11 HTYGSCINNITYAAQM-SHNHILKRIGCCLQTPIPILVFQSVEYGTLRDCIFGAP-LPRLKIASDIVNSLAYLHFGFPRP   88 (241)
Q Consensus        11 ~~~~~~~~e~~~l~~l-~h~~iv~~~~~~~~~~~~~lv~e~~~~~sL~~~l~~~~-~~~~~~~~~i~~~l~~lh~~~~~~   88 (241)
                      ...++|.+|+++|+++ .|+||+++++++++++..||||||++|++|.+++.... .....++.||+.||.|+|   ++|
T Consensus       283 ~~~~~~~~E~~~l~~~~~~~~i~~~~~~~ed~~~~yLVMEyv~G~~L~d~i~~~~~l~~~~I~~QIl~AL~ylH---~~G  359 (569)
T 4azs_A          283 RNKYELHNEIKFLTQPPAGFDAPAVLAHGENAQSGWLVMEKLPGRLLSDMLAAGEEIDREKILGSLLRSLAALE---KQG  359 (569)
T ss_dssp             HHHHHHHHHHHHHHSCCTTCCCCCEEEEEECSSEEEEEEECCCSEEHHHHHHTTCCCCHHHHHHHHHHHHHHHH---HTT
T ss_pred             HHHHHHHHHHHHHHhcCCCCCeeEEEEEEEECCEEEEEEecCCCCcHHHHHHhCCCCCHHHHHHHHHHHHHHHH---HCC
Confidence            3456799999999999 79999999999999999999999999999999997764 456679999999999999   999


Q ss_pred             ceeccCCCCCeeecCCCCeEEeeccCceecCCCCcceeecccccCCCccCcccccccCCCcchhhHHHHHHHHHHHhcCc
Q 044022           89 IVLRNFKTQNILFNEENVAKWFDFLLSISIPEGETHITTDRVIGTRGYSAPEYISICVLNEKSNVFSFGAFLFELLAGRI  168 (241)
Q Consensus        89 ivh~dl~~~nil~~~~~~~~l~df~~~~~~~~~~~~~~~~~~~~~~~~~aPE~~~~~~~~~~~Di~s~G~~~~~~~~g~~  168 (241)
                      ||||||||+|||++.++.+||+|||+++.......  .....+||+.|+|||++.+ ....++|+||+|++.+++.++..
T Consensus       360 IIHRDIKPeNILL~~dg~vKL~DFGlAr~~~~~~~--~~~t~vGTp~YmAPE~l~g-~~~~~~d~~s~g~~~~~l~~~~~  436 (569)
T 4azs_A          360 FWHDDVRPWNVMVDARQHARLIDFGSIVTTPQDCS--WPTNLVQSFFVFVNELFAE-NKSWNGFWRSAPVHPFNLPQPWS  436 (569)
T ss_dssp             CEESCCCGGGEEECTTSCEEECCCTTEESCC---C--CSHHHHHHHHHHHHHHC------------------CCCCTTHH
T ss_pred             ceeccCchHhEEECCCCCEEEeecccCeeCCCCCc--cccCceechhhccHHHhCC-CCCCcccccccccchhhhccccc
Confidence            99999999999999999999999999986654332  2244679999999999975 45678999999999888776655


Q ss_pred             cc
Q 044022          169 HI  170 (241)
Q Consensus       169 p~  170 (241)
                      ++
T Consensus       437 ~~  438 (569)
T 4azs_A          437 NW  438 (569)
T ss_dssp             HH
T ss_pred             hh
Confidence            44


No 252
>3en9_A Glycoprotease, O-sialoglycoprotein endopeptidase/protein kinase; endopeptidase activity, protein kinase activity; HET: TBR; 2.67A {Methanocaldococcus jannaschii} PDB: 3enh_A* 2vwb_A*
Probab=99.92  E-value=2.6e-26  Score=198.35  Aligned_cols=149  Identities=15%  Similarity=0.085  Sum_probs=127.3

Q ss_pred             HHHHHHHHHHHHhcCCCcccceeeeeeeCCcceEEEEecCCCCHHHhhcCCCchHHHHHHHHHHHhchhhcCCCCCceec
Q 044022           13 YGSCINNITYAAQMSHNHILKRIGCCLQTPIPILVFQSVEYGTLRDCIFGAPLPRLKIASDIVNSLAYLHFGFPRPIVLR   92 (241)
Q Consensus        13 ~~~~~~e~~~l~~l~h~~iv~~~~~~~~~~~~~lv~e~~~~~sL~~~l~~~~~~~~~~~~~i~~~l~~lh~~~~~~ivh~   92 (241)
                      .+++.+|++++++++||||+++..++...+..++||||+++++|.+++..    ...++.|++.||.|||   +++|+||
T Consensus       383 ~~~~~~E~~il~~l~h~nIv~~~~~~~~~~~~~lVmE~~~ggsL~~~l~~----~~~i~~qi~~aL~~LH---~~gIiHr  455 (540)
T 3en9_A          383 KSRTAREARYLALVKDFGIPAPYIFDVDLDNKRIMMSYINGKLAKDVIED----NLDIAYKIGEIVGKLH---KNDVIHN  455 (540)
T ss_dssp             HHHHHHHHHHHHHGGGGTCCCCCEEEEETTTTEEEEECCCSEEHHHHSTT----CTHHHHHHHHHHHHHH---HTTEECT
T ss_pred             HHHHHHHHHHHHhcCCCCcCceEEEEEeCCccEEEEECCCCCCHHHHHHH----HHHHHHHHHHHHHHHH---HCcCccC
Confidence            45689999999999999999777777788888999999999999999987    6789999999999999   8999999


Q ss_pred             cCCCCCeeecCCCCeEEeeccCceecCCCCcce-----eecccccCCCccCcccccc--cCCCcchhhHHHHHHHHHHHh
Q 044022           93 NFKTQNILFNEENVAKWFDFLLSISIPEGETHI-----TTDRVIGTRGYSAPEYISI--CVLNEKSNVFSFGAFLFELLA  165 (241)
Q Consensus        93 dl~~~nil~~~~~~~~l~df~~~~~~~~~~~~~-----~~~~~~~~~~~~aPE~~~~--~~~~~~~Di~s~G~~~~~~~~  165 (241)
                      ||||+|||++.  .+||+|||+++.........     ......||+.|+|||++..  ..|+..+|+||..+-..+-+.
T Consensus       456 DiKp~NILl~~--~~kL~DFGla~~~~~~~~~~~~~~~~~~~~~GT~~y~APEv~~~~~~~Y~~~~d~ws~vl~~l~~v~  533 (540)
T 3en9_A          456 DLTTSNFIFDK--DLYIIDFGLGKISNLDEDKAVDLIVFKKAVLSTHHEKFDEIWERFLEGYKSVYDRWEIILELMKDVE  533 (540)
T ss_dssp             TCCTTSEEESS--SEEECCCTTCEECCCHHHHHHHHHHHHHHHHHHCGGGHHHHHHHHHHHHHHHCTTHHHHHHHHHHHH
T ss_pred             CCCHHHEEECC--eEEEEECccCEECCCccccccchhhhhhhhcCCCCcCCHHHHHHHHHHHHHHHhHHHHHHHHHHHHH
Confidence            99999999998  99999999998775532211     1134578999999999986  567788899999988888877


Q ss_pred             cCccc
Q 044022          166 GRIHI  170 (241)
Q Consensus       166 g~~p~  170 (241)
                      ++.+|
T Consensus       534 ~r~rY  538 (540)
T 3en9_A          534 RRARY  538 (540)
T ss_dssp             TCSCC
T ss_pred             hcccc
Confidence            76655


No 253
>1zar_A RIO2 kinase; serine kinase, winged-helix, RIO domain, ADP-Mn complex, rRNA processing, transferase; HET: ADP; 1.75A {Archaeoglobus fulgidus} SCOP: a.4.5.56 d.144.1.9 PDB: 1tqi_A* 1tqp_A* 1tqm_A* 1zao_A*
Probab=99.80  E-value=4.3e-20  Score=147.13  Aligned_cols=105  Identities=15%  Similarity=0.090  Sum_probs=88.1

Q ss_pred             HHHHHHHHHHHHhcCCCcccceeeeeeeCCcceEEEEecCCCCHHHhhcCCCchHHHHHHHHHHHhchhhcCCCCCceec
Q 044022           13 YGSCINNITYAAQMSHNHILKRIGCCLQTPIPILVFQSVEYGTLRDCIFGAPLPRLKIASDIVNSLAYLHFGFPRPIVLR   92 (241)
Q Consensus        13 ~~~~~~e~~~l~~l~h~~iv~~~~~~~~~~~~~lv~e~~~~~sL~~~l~~~~~~~~~~~~~i~~~l~~lh~~~~~~ivh~   92 (241)
                      ..++.+|++++++++  | +++.+++.. +..++||||+++++|.+ +..  .....++.+++.||.|||   +.+++||
T Consensus       148 ~~~~~~E~~~l~~l~--~-~~v~~~~~~-~~~~lvmE~~~g~~L~~-l~~--~~~~~i~~qi~~~l~~lH---~~giiHr  217 (282)
T 1zar_A          148 IRSARNEFRALQKLQ--G-LAVPKVYAW-EGNAVLMELIDAKELYR-VRV--ENPDEVLDMILEEVAKFY---HRGIVHG  217 (282)
T ss_dssp             HHHHHHHHHHHHHTT--T-SSSCCEEEE-ETTEEEEECCCCEEGGG-CCC--SCHHHHHHHHHHHHHHHH---HTTEECS
T ss_pred             HHHHHHHHHHHHhcc--C-CCcCeEEec-cceEEEEEecCCCcHHH-cch--hhHHHHHHHHHHHHHHHH---HCCCEeC
Confidence            567899999999999  5 777776544 56799999999999999 532  335579999999999999   9999999


Q ss_pred             cCCCCCeeecCCCCeEEeeccCceecCCCCcceeecccccCCCccCccccc
Q 044022           93 NFKTQNILFNEENVAKWFDFLLSISIPEGETHITTDRVIGTRGYSAPEYIS  143 (241)
Q Consensus        93 dl~~~nil~~~~~~~~l~df~~~~~~~~~~~~~~~~~~~~~~~~~aPE~~~  143 (241)
                      ||||+|||++ ++.++|+|||+++..               ..+.|||++.
T Consensus       218 Dlkp~NILl~-~~~vkl~DFG~a~~~---------------~~~~a~e~l~  252 (282)
T 1zar_A          218 DLSQYNVLVS-EEGIWIIDFPQSVEV---------------GEEGWREILE  252 (282)
T ss_dssp             CCSTTSEEEE-TTEEEECCCTTCEET---------------TSTTHHHHHH
T ss_pred             CCCHHHEEEE-CCcEEEEECCCCeEC---------------CCCCHHHHHH
Confidence            9999999999 999999999998642               3357888774


No 254
>1zth_A RIO1 serine protein kinase; ribosome biogenesis, rRNA, ADP, manganese, transferase; HET: ADP; 1.89A {Archaeoglobus fulgidus} PDB: 1zp9_A* 1ztf_A*
Probab=99.54  E-value=1.2e-14  Score=114.22  Aligned_cols=97  Identities=12%  Similarity=0.097  Sum_probs=76.7

Q ss_pred             HHHHHHHHHHHhcCCCcc--cceeeeeeeCCcceEEEEecCC-C----CHHHhhcCC-CchHHHHHHHHHHHhchhhcCC
Q 044022           14 GSCINNITYAAQMSHNHI--LKRIGCCLQTPIPILVFQSVEY-G----TLRDCIFGA-PLPRLKIASDIVNSLAYLHFGF   85 (241)
Q Consensus        14 ~~~~~e~~~l~~l~h~~i--v~~~~~~~~~~~~~lv~e~~~~-~----sL~~~l~~~-~~~~~~~~~~i~~~l~~lh~~~   85 (241)
                      ..+.+|++++.++.|+++  +..+++    +..++||||+.+ |    +|.+..... ......++.+++.|+.+||.  
T Consensus       115 ~~~~~E~~~l~~l~~~~i~~p~~~~~----~~~~lVmE~~g~~g~~~~~L~~~~~~~~~~~~~~i~~qi~~~l~~lH~--  188 (258)
T 1zth_A          115 IWTEKEFRNLERAKEAGVSVPQPYTY----MKNVLLMEFIGEDELPAPTLVELGRELKELDVEGIFNDVVENVKRLYQ--  188 (258)
T ss_dssp             HHHHHHHHHHHHHHHTTCCCCCEEEE----ETTEEEEECCEETTEECCBHHHHGGGGGGSCHHHHHHHHHHHHHHHHH--
T ss_pred             HHHHHHHHHHHHHHhCCCCCCeEEEc----CCCEEEEEecCCCCCccccHHHHhhccChHHHHHHHHHHHHHHHHHHH--
Confidence            368899999999988765  333332    357999999942 3    777765432 23567899999999999994  


Q ss_pred             CCCceeccCCCCCeeecCCCCeEEeeccCceec
Q 044022           86 PRPIVLRNFKTQNILFNEENVAKWFDFLLSISI  118 (241)
Q Consensus        86 ~~~ivh~dl~~~nil~~~~~~~~l~df~~~~~~  118 (241)
                      +.+++||||||.|||++.  .++|+|||++...
T Consensus       189 ~~givHrDlkp~NILl~~--~~~liDFG~a~~~  219 (258)
T 1zth_A          189 EAELVHADLSEYNIMYID--KVYFIDMGQAVTL  219 (258)
T ss_dssp             TSCEECSSCSTTSEEESS--SEEECCCTTCEET
T ss_pred             HCCEEeCCCCHHHEEEcC--cEEEEECcccccC
Confidence            468999999999999998  8999999999754


No 255
>4gyi_A RIO2 kinase; protein kinase, ADP complex, phosphoaspartate, acyl-phosphat ribosome biogenesis, Ser/Thr protein kinase; HET: PHD ADP; 2.20A {Chaetomium thermophilum} PDB: 4gyg_A
Probab=99.34  E-value=4e-13  Score=110.45  Aligned_cols=71  Identities=18%  Similarity=0.230  Sum_probs=59.3

Q ss_pred             ceEEEEecCCCCHHHhhcCCCchHHHHHHHHHHHhchhhcCCCCCceeccCCCCCeeecCCC----------CeEEeecc
Q 044022           44 PILVFQSVEYGTLRDCIFGAPLPRLKIASDIVNSLAYLHFGFPRPIVLRNFKTQNILFNEEN----------VAKWFDFL  113 (241)
Q Consensus        44 ~~lv~e~~~~~sL~~~l~~~~~~~~~~~~~i~~~l~~lh~~~~~~ivh~dl~~~nil~~~~~----------~~~l~df~  113 (241)
                      .++||||+.|++|..+...  .....++.|++.++.+||   ..++|||||||.|||++.++          .+.|+||+
T Consensus       186 ~~LVME~i~G~~L~~l~~~--~~~~~l~~qll~~l~~lH---~~gIVHrDLKp~NILl~~dgd~~d~~~~~~~~~iID~~  260 (397)
T 4gyi_A          186 HTIVMSLVDALPMRQVSSV--PDPASLYADLIALILRLA---KHGLIHGDFNEFNILIREEKDAEDPSSITLTPIIIXFP  260 (397)
T ss_dssp             TEEEEECCSCEEGGGCCCC--SCHHHHHHHHHHHHHHHH---HTTEECSCCSTTSEEEEEEECSSCTTSEEEEEEECCCT
T ss_pred             ceEEEEecCCccHhhhccc--HHHHHHHHHHHHHHHHHH---HCCCcCCCCCHHHEEEeCCCCcccccccccceEEEEeC
Confidence            4799999999888775443  234567899999999999   89999999999999998776          38999999


Q ss_pred             CceecC
Q 044022          114 LSISIP  119 (241)
Q Consensus       114 ~~~~~~  119 (241)
                      .+....
T Consensus       261 Q~V~~~  266 (397)
T 4gyi_A          261 QMVSMD  266 (397)
T ss_dssp             TCEETT
T ss_pred             CcccCC
Confidence            887643


No 256
>3tm0_A Aminoglycoside 3'-phosphotransferase; protein kinase, phosphorylation, transferase-antibiotic COMP; HET: ANP B31; 2.10A {Enterococcus faecalis} SCOP: d.144.1.6 PDB: 2b0q_A* 1l8t_A* 3q2j_A* 1j7i_A* 1j7u_A* 3h8p_A* 1j7l_A* 2bkk_A*
Probab=99.07  E-value=3e-10  Score=89.02  Aligned_cols=103  Identities=10%  Similarity=-0.044  Sum_probs=81.5

Q ss_pred             HHHHHHHHHHHHhcC-CCcccceeeeeeeCCcceEEEEecCCCCHHHhhcCCCchHHHHHHHHHHHhchhhcC-------
Q 044022           13 YGSCINNITYAAQMS-HNHILKRIGCCLQTPIPILVFQSVEYGTLRDCIFGAPLPRLKIASDIVNSLAYLHFG-------   84 (241)
Q Consensus        13 ~~~~~~e~~~l~~l~-h~~iv~~~~~~~~~~~~~lv~e~~~~~sL~~~l~~~~~~~~~~~~~i~~~l~~lh~~-------   84 (241)
                      ...+.+|+.+++.+. +..+.++++++...+..++|||+++|.+|.+.+.. ......++.+++.+++.||..       
T Consensus        53 ~~~~~~E~~~l~~l~~~~~vP~v~~~~~~~~~~~lv~e~i~G~~l~~~~~~-~~~~~~~~~~l~~~l~~LH~~~~~~~~~  131 (263)
T 3tm0_A           53 TYDVEREKDMMLWLEGKLPVPKVLHFERHDGWSNLLMSEADGVLCSEEYED-EQSPEKIIELYAECIRLFHSIDISDCPY  131 (263)
T ss_dssp             TTCHHHHHHHHHHHTTTSCCCCEEEEEEETTEEEEEEECCSSEEHHHHCCT-TTCHHHHHHHHHHHHHHHHHSCCTTCSC
T ss_pred             HHHHHHHHHHHHHHhcCCCCCeEEEEEecCCceEEEEEecCCeehhhccCC-cccHHHHHHHHHHHHHHHhCCCcccCCC
Confidence            346889999999994 56778899999888889999999999999886432 223457788888899999941       


Q ss_pred             -------------------------------------------------CCCCceeccCCCCCeeecCCCCeEEeeccCc
Q 044022           85 -------------------------------------------------FPRPIVLRNFKTQNILFNEENVAKWFDFLLS  115 (241)
Q Consensus        85 -------------------------------------------------~~~~ivh~dl~~~nil~~~~~~~~l~df~~~  115 (241)
                                                                       ....++|+|+++.||+++....+.|+||+.+
T Consensus       132 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~~~~~~~~l~HgDl~~~Nil~~~~~~~~lIDwe~a  211 (263)
T 3tm0_A          132 TNSLDSRLAELDYLLNNDLADVDCENWEEDTPFKDPRELYDFLKTEKPEEELVFSHGDLGDSNIFVKDGKVSGFIDLGRS  211 (263)
T ss_dssp             BCCHHHHHHHHHHHHHTTCSCCSGGGGSTTCSSSSHHHHHHHHHHCCCCCCEEEECSSCCTTSEEEETTEEEEECCCTTC
T ss_pred             cchHHHHHHHHHHHHhccccccccccccccccCCCHHHHHHHHHhcCCCCCceEECCCCCcCcEEEECCcEEEEEEchhc
Confidence                                                             0144899999999999987666679999876


Q ss_pred             e
Q 044022          116 I  116 (241)
Q Consensus       116 ~  116 (241)
                      .
T Consensus       212 ~  212 (263)
T 3tm0_A          212 G  212 (263)
T ss_dssp             E
T ss_pred             c
Confidence            3


No 257
>1nd4_A Aminoglycoside 3'-phosphotransferase; protein kinase, ATPase, kanamycin; HET: KAN; 2.10A {Klebsiella pneumoniae} SCOP: d.144.1.6
Probab=99.02  E-value=4.1e-10  Score=87.86  Aligned_cols=99  Identities=10%  Similarity=-0.014  Sum_probs=74.4

Q ss_pred             HHHHHHHHHHHhcCCCc--ccceeeeeeeCCcceEEEEecCCCCHHHhhcCCCchHHHHHHHHHHHhchhhcCC------
Q 044022           14 GSCINNITYAAQMSHNH--ILKRIGCCLQTPIPILVFQSVEYGTLRDCIFGAPLPRLKIASDIVNSLAYLHFGF------   85 (241)
Q Consensus        14 ~~~~~e~~~l~~l~h~~--iv~~~~~~~~~~~~~lv~e~~~~~sL~~~l~~~~~~~~~~~~~i~~~l~~lh~~~------   85 (241)
                      ..+.+|+.+++.+.+.+  +.+++++...++..++||||++|.+|.  ...  .....++.+++..++.||...      
T Consensus        58 ~~~~~E~~~l~~l~~~~~~vP~~~~~~~~~~~~~~v~e~i~G~~l~--~~~--~~~~~~~~~l~~~l~~lh~~~~~~~~~  133 (264)
T 1nd4_A           58 NELQDEAARLSWLATTGVPCAAVLDVVTEAGRDWLLLGEVPGQDLL--SSH--LAPAEKVSIMADAMRRLHTLDPATCPF  133 (264)
T ss_dssp             SCHHHHHHHHHHHHTTTCCBCCEEEEEECSSCEEEEEECCSSEETT--TSC--CCHHHHHHHHHHHHHHHTTSCGGGCCC
T ss_pred             hhhhHHHHHHHHHHhCCCCCCeEEEeccCCCCCEEEEEecCCcccC--cCc--CCHhHHHHHHHHHHHHHhCCCCCCCCC
Confidence            56789999999995544  456888887777889999999998884  221  223456777777788887321      


Q ss_pred             -------------------------------------------------CCCceeccCCCCCeeecCCCCeEEeeccCce
Q 044022           86 -------------------------------------------------PRPIVLRNFKTQNILFNEENVAKWFDFLLSI  116 (241)
Q Consensus        86 -------------------------------------------------~~~ivh~dl~~~nil~~~~~~~~l~df~~~~  116 (241)
                                                                       ...++|+|++|.||+++.++.+.|+||+.+.
T Consensus       134 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~l~HgDl~~~Nil~~~~~~~~liD~~~a~  213 (264)
T 1nd4_A          134 DHQAKHRIERARTRMEAGLVDQDDLDEEHQGLAPAELFARLKARMPDGEDLVVTHGDACLPNIMVENGRFSGFIDCGRLG  213 (264)
T ss_dssp             BCCHHHHHHHHHHHHHTTCCCTTSCCGGGTTCCHHHHHHHHHHTCCSSCCEEEECSSCCGGGEEEETTEEEEECCCTTCE
T ss_pred             chHHHHHHHHHHHHHhcCCccchhhhhhccCccHHHHHHHHHHhcCCCCCeEEECCCCCCCcEEEECCcEEEEEcchhcc
Confidence                                                             1129999999999999877667799998774


No 258
>3dxp_A Putative acyl-COA dehydrogenase; protein kinase-like fold, structural genomics, joint center structural genomics, JCSG; 2.32A {Ralstonia eutropha JMP134}
Probab=98.81  E-value=7.8e-09  Score=84.69  Aligned_cols=105  Identities=16%  Similarity=0.174  Sum_probs=78.1

Q ss_pred             HHHHHHHHHHHHhcCC--CcccceeeeeeeC---CcceEEEEecCCCCHHHh-hcCCC-chHHHHHHHHHHHhchhhcCC
Q 044022           13 YGSCINNITYAAQMSH--NHILKRIGCCLQT---PIPILVFQSVEYGTLRDC-IFGAP-LPRLKIASDIVNSLAYLHFGF   85 (241)
Q Consensus        13 ~~~~~~e~~~l~~l~h--~~iv~~~~~~~~~---~~~~lv~e~~~~~sL~~~-l~~~~-~~~~~~~~~i~~~l~~lh~~~   85 (241)
                      ...+.+|+.+++.|..  ..+++++.++...   +..++|||+++|.++.+. +.... ..+..++.+++..|+.||...
T Consensus        80 ~~~~~~E~~~l~~L~~~~vpvP~~~~~~~~~~~~g~~~~vme~v~G~~l~~~~~~~l~~~~~~~~~~~l~~~La~LH~~~  159 (359)
T 3dxp_A           80 AHAIEREYRVMDALAGTDVPVAKMYALCEDESVIGRAFYIMEFVSGRVLWDQSLPGMSPAERTAIYDEMNRVIAAMHTVD  159 (359)
T ss_dssp             --CHHHHHHHHHHHTTSSSCCCCEEEEECCTTTTSSCEEEEECCCCBCCCCTTCTTCCHHHHHHHHHHHHHHHHHHHHSC
T ss_pred             HHHHHHHHHHHHHhhcCCCCCCcEEEECCCCCccCCeEEEEEecCCeecCCCccccCCHHHHHHHHHHHHHHHHHHhCCC
Confidence            4578889999999964  4577888888766   458999999998887542 22211 245667888888888888410


Q ss_pred             -------------------------------------------------------CCCceeccCCCCCeeecCCCC--eE
Q 044022           86 -------------------------------------------------------PRPIVLRNFKTQNILFNEENV--AK  108 (241)
Q Consensus        86 -------------------------------------------------------~~~ivh~dl~~~nil~~~~~~--~~  108 (241)
                                                                             ...++|+|+++.||+++.++.  +.
T Consensus       160 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~lvHgD~~~~Nil~~~~~~~v~~  239 (359)
T 3dxp_A          160 YQAIGLGDYGKPGNYFQRQIERWTKQYKLSETESIPAMDSLMDWLPQHIPQEDADLTSIVHGDYRLDNLMFHPTEPRVLA  239 (359)
T ss_dssp             TTTTTCTTSSCCSCHHHHHHHHHHHHHHHHCCSCCHHHHHHHHHGGGCCCSTTSSCCEEECSSCSGGGEEECSSSSCEEE
T ss_pred             chhccccccCCCCCchHHHHHHHHHHHHhcCCcCChHHHHHHHHHHhcCCCccCCCceEEeCCCCCCcEEEeCCCCcEEE
Confidence                                                                   246899999999999987753  68


Q ss_pred             EeeccCcee
Q 044022          109 WFDFLLSIS  117 (241)
Q Consensus       109 l~df~~~~~  117 (241)
                      |+||+.+..
T Consensus       240 viDwe~a~~  248 (359)
T 3dxp_A          240 VLDWELSTL  248 (359)
T ss_dssp             ECCCTTCEE
T ss_pred             EECcccccc
Confidence            999998864


No 259
>3sg8_A APH(2'')-ID; antibiotic resistance enzyme, transferase, aminoglycoside, phosphorylation, transferase-antibiotic complex; HET: TOY; 1.80A {Enterococcus casseliflavus} PDB: 3sg9_A* 3n4v_A 3n4t_A 3n4u_A 3r81_A* 3r80_A* 3r7z_A* 3r82_A* 3vcq_A* 4dbx_A 4de4_A* 4dfb_A* 4dfu_A* 4dt9_A* 4dt8_A* 4dtb_A* 3sgc_A 4dta_A* 3lzh_A
Probab=98.58  E-value=1.9e-08  Score=80.55  Aligned_cols=157  Identities=15%  Similarity=0.213  Sum_probs=91.0

Q ss_pred             cHHHHHHHHHHHHhcC-CCc--ccceeeeeeeCC---cceEEEEecCCCCHHHhhc-CCC-chHHHHHHHHHHHhchhhc
Q 044022           12 TYGSCINNITYAAQMS-HNH--ILKRIGCCLQTP---IPILVFQSVEYGTLRDCIF-GAP-LPRLKIASDIVNSLAYLHF   83 (241)
Q Consensus        12 ~~~~~~~e~~~l~~l~-h~~--iv~~~~~~~~~~---~~~lv~e~~~~~sL~~~l~-~~~-~~~~~~~~~i~~~l~~lh~   83 (241)
                      ....+.+|+++++.+. +..  +.+++......+   ..++||++++|.+|.+... ... ..+..++.+++..++.||.
T Consensus        53 ~~~~~~~E~~~l~~l~~~~~v~vP~~~~~~~~~~~~~~~~~vm~~i~G~~l~~~~~~~l~~~~~~~~~~~l~~~la~LH~  132 (304)
T 3sg8_A           53 GSTNLFNEVNILKRIHNKLPLPIPEVVFTGMPSETYQMSFAGFTKIKGVPLTPLLLNNLPKQSQNQAAKDLARFLSELHS  132 (304)
T ss_dssp             HHHHHHHHHHHHHHHTTSSSSCCCCEEEECCCCSSCSCSCEEEECCCCEECCHHHHHTSCHHHHHHHHHHHHHHHHHHHH
T ss_pred             hHHHHHHHHHHHHHHHhcCCCCCCceEeecCCCCCCCcceEEEcccCCeECCccccccCCHHHHHHHHHHHHHHHHHHHc
Confidence            3567889999999984 333  234444433322   4589999999988865322 111 1233445555555555542


Q ss_pred             -------------------------------------------------------CCCCCceeccCCCCCeeecC--CCC
Q 044022           84 -------------------------------------------------------GFPRPIVLRNFKTQNILFNE--ENV  106 (241)
Q Consensus        84 -------------------------------------------------------~~~~~ivh~dl~~~nil~~~--~~~  106 (241)
                                                                             .....++|+|+++.||+++.  ...
T Consensus       133 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~l~~~~~~~~~~~~~HgD~~~~N~l~~~~~~~~  212 (304)
T 3sg8_A          133 INISGFKSNLVLDFREKINEDNKKIKKLLSRELKGPQMKKVDDFYRDILENEIYFKYYPCLIHNDFSSDHILFDTEKNTI  212 (304)
T ss_dssp             SCCTTSCGGGBCCHHHHHHHHHHHHHHHHTTTSCHHHHHHHHHHHHHHHTCGGGTCCCCEEECSCCCGGGEEEETTTTEE
T ss_pred             CCCCCCCccchhhHHHHHHHHHHHHHHHhcccCCcccHHHHHHHHHHHHhccccccCCceeEeCCCCcccEEEeCCCCCE
Confidence                                                                   11235799999999999998  456


Q ss_pred             eEEeeccCceecCCCCcceeecccccCCCccCcccccc---c-----------CCCcchhhHHHHHHHHHHHhcCcccc
Q 044022          107 AKWFDFLLSISIPEGETHITTDRVIGTRGYSAPEYISI---C-----------VLNEKSNVFSFGAFLFELLAGRIHIW  171 (241)
Q Consensus       107 ~~l~df~~~~~~~~~~~~~~~~~~~~~~~~~aPE~~~~---~-----------~~~~~~Di~s~G~~~~~~~~g~~p~~  171 (241)
                      +.++||+.+............   .....-..|+....   .           ......+.|+++.++|.+.+|..+|.
T Consensus       213 ~~~iD~~~~~~~~~~~Dl~~~---~~~~~~~~~~~~~~~l~~Y~~~~~~~~~~r~~~~~~~~~l~~~~~~~~~g~~~~~  288 (304)
T 3sg8_A          213 CGIIDFGDAAISDPDNDFISL---MEDDEEYGMEFVSKILNHYKHKDIPTVLEKYRMKEKYWSFEKIIYGKEYGYMDWY  288 (304)
T ss_dssp             EEECCCTTCEEECTTHHHHTT---CCTTTSCCHHHHHHHHHHHTCSCHHHHHHHHHHHHHHHHHHHHHHHHHTTCHHHH
T ss_pred             EEEEeCCCCccCChHHHHHHH---HhhccccCHHHHHHHHHHcCCCCcHHHHHHHHHHHHHHHHHHHHHHHHcCCHHHH
Confidence            789999987654321100000   00000011211110   0           01122688999999999999998874


No 260
>4gkh_A Aminoglycoside 3'-phosphotransferase APHA1-IAB; pyrazolopyrimidine, 1-Na-PP1, bumped kinase inhibitor, BKI, kinase inhibitor; HET: KAN 0J9; 1.86A {Acinetobacter baumannii} PDB: 4feu_A* 4few_A* 4fex_A* 4fev_A* 4gki_A* 4ej7_A* 3r78_A*
Probab=98.34  E-value=2.2e-06  Score=67.13  Aligned_cols=104  Identities=12%  Similarity=0.033  Sum_probs=71.5

Q ss_pred             HHHHHHHHHHHHhcCC-CcccceeeeeeeCCcceEEEEecCCCCHHHhhcCCCchHHHHHHHHHHHhchhhc--------
Q 044022           13 YGSCINNITYAAQMSH-NHILKRIGCCLQTPIPILVFQSVEYGTLRDCIFGAPLPRLKIASDIVNSLAYLHF--------   83 (241)
Q Consensus        13 ~~~~~~e~~~l~~l~h-~~iv~~~~~~~~~~~~~lv~e~~~~~sL~~~l~~~~~~~~~~~~~i~~~l~~lh~--------   83 (241)
                      ...+.+|..+|+.|.. --+.++++++...+..++|||+++|.++.+...........+..++...++-||.        
T Consensus        63 ~~~~~~E~~~l~~l~~~vPVP~v~~~~~~~~~~~lvme~l~G~~~~~~~~~~~~~~~~~~~~l~~~L~~Lh~~~~~~~~~  142 (272)
T 4gkh_A           63 ANDVTDEMVRLNWLTAFMPLPTIKHFIRTPDDAWLLTTAIPGKTAFQVLEEYPDSGENIVDALAVFLRRLHSIPVCNCPF  142 (272)
T ss_dssp             HHHHHHHHHHHHHHTTTSCCCCEEEEEEETTEEEEEEECCCSEEHHHHHHHCGGGHHHHHHHHHHHHHHHHTSCGGGCCB
T ss_pred             HhHHHHHHHHHHHhccCCCcCeEEEEEEECCeEEEEEEeeCCccccccccCCHHHHHHHHHHHHHHHHHhcCCCcccCCc
Confidence            4567889999998843 2356788888888899999999998887765433322222333333333333331        


Q ss_pred             -----------------------------------------------CCCCCceeccCCCCCeeecCCCCeEEeeccCce
Q 044022           84 -----------------------------------------------GFPRPIVLRNFKTQNILFNEENVAKWFDFLLSI  116 (241)
Q Consensus        84 -----------------------------------------------~~~~~ivh~dl~~~nil~~~~~~~~l~df~~~~  116 (241)
                                                                     .....++|+|+.+.||+++..+.+-|+||+.+.
T Consensus       143 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~l~HGDl~~~Nil~~~~~~~~viDwe~a~  222 (272)
T 4gkh_A          143 NSDRVFRLAQAQSRMNNGLVDASDFDDERNGWPVEQVWKEMHKLLPFSPDSVVTHGDFSLDNLIFDEGKLIGCIDVGRVG  222 (272)
T ss_dssp             BCCHHHHHHHHHHHHHTTCCCGGGCCGGGTTCCHHHHHHHHHTTCCCCCCEEEECSCCCTTSEEEETTEEEEECCCTTCE
T ss_pred             CcccccchhhHHHHHHHhhhhhhhccccccchHHHHHHHHHHhcccccCCcEEEcCCCCCCeEEEECCeEEEEEECcccc
Confidence                                                           001237899999999999987777899998774


No 261
>3r70_A Aminoglycoside phosphotransferase; structural genomics, center for structural genomics of infec diseases, csgid; HET: MSE ADP PE3; 1.80A {Escherichia coli} PDB: 3r6z_A* 3uzr_A* 4dca_A* 3hav_A* 3ham_A*
Probab=98.12  E-value=7.1e-06  Score=65.97  Aligned_cols=102  Identities=13%  Similarity=0.002  Sum_probs=67.4

Q ss_pred             HHHHHHHHHHHHhcCC---C-cccceeeeeeeCCcceEEEEecCCCCHHHhh-cCCC-chHHHHHHHHHHHhchhhcCC-
Q 044022           13 YGSCINNITYAAQMSH---N-HILKRIGCCLQTPIPILVFQSVEYGTLRDCI-FGAP-LPRLKIASDIVNSLAYLHFGF-   85 (241)
Q Consensus        13 ~~~~~~e~~~l~~l~h---~-~iv~~~~~~~~~~~~~lv~e~~~~~sL~~~l-~~~~-~~~~~~~~~i~~~l~~lh~~~-   85 (241)
                      ...+.+|..+++.+.+   + .+.+++++    +..++||||++|.++.... .... .....++.+++..++.||... 
T Consensus        71 ~~~~~~E~~~L~~L~~~~~~~~vP~v~~~----~~~~lvme~i~G~~l~~~~~~~l~~~~~~~~~~~l~~~La~LH~~~~  146 (320)
T 3r70_A           71 RISQKRELELYRFLENCKLSYQIPAVVYQ----SDRFNIMKYIKGERITYEQYHKLSEKEKDALAYDEATFLKELHSIEI  146 (320)
T ss_dssp             HHHHHHHHHHHHHHTTSCCSSBCCCEEEE----CSSCEEEECCCCBCCCHHHHTTSCHHHHHHHHHHHHHHHHHHHHSCC
T ss_pred             HHHHHHHHHHHHHHHhcCCCCCcceEEec----CCcEEEEeecCCccccccccccCCHHHHHHHHHHHHHHHHHHhCCCc
Confidence            4568899999999966   2 23344544    5678999999998886332 1111 123344445555554444211 


Q ss_pred             -----------------------------------------------------------CCCceeccCCCCCeeecCCCC
Q 044022           86 -----------------------------------------------------------PRPIVLRNFKTQNILFNEENV  106 (241)
Q Consensus        86 -----------------------------------------------------------~~~ivh~dl~~~nil~~~~~~  106 (241)
                                                                                 ...++|+|++|.||+++....
T Consensus       147 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~H~D~~~~N~l~~~~~~  226 (320)
T 3r70_A          147 DCSVSLFSDALVNKKDKFLQDKKLLISILEKEQLLTDEMLEHIETIYENILSNAVLFKYTPCLVHNDFSANNMIFRNNRL  226 (320)
T ss_dssp             CTTSHHHHTTBCCHHHHHHHHHHHHHHHHHHTTCCCHHHHHHHHHHHHHHHTCGGGTCCCCEEECSCCSGGGEEEETTEE
T ss_pred             ccCCCccccccccchHHHHHHHHHHHHHHhhcccccccchHHHHHHHHHHHhccccccCCceeeECCCCCCcEEEECCce
Confidence                                                                       224599999999999998666


Q ss_pred             eEEeeccCceec
Q 044022          107 AKWFDFLLSISI  118 (241)
Q Consensus       107 ~~l~df~~~~~~  118 (241)
                      +.|+||+.+...
T Consensus       227 ~~~iD~~~~~~~  238 (320)
T 3r70_A          227 FGVIDFGDFNVG  238 (320)
T ss_dssp             EEECCCTTCEEE
T ss_pred             EEEECCcccccC
Confidence            799999988643


No 262
>3tdw_A Gentamicin resistance protein; kinase, phosphoryl transfer, antibiotic resistance, transfer; HET: GDP; 1.70A {Enterococcus gallinarum} PDB: 3tdv_A*
Probab=97.87  E-value=4.7e-05  Score=60.80  Aligned_cols=47  Identities=11%  Similarity=0.044  Sum_probs=34.4

Q ss_pred             cHHHHHHHHHHHHhcCCC---cccceeeeee-eCCcceEEEEecCCCCHHH
Q 044022           12 TYGSCINNITYAAQMSHN---HILKRIGCCL-QTPIPILVFQSVEYGTLRD   58 (241)
Q Consensus        12 ~~~~~~~e~~~l~~l~h~---~iv~~~~~~~-~~~~~~lv~e~~~~~sL~~   58 (241)
                      ....+.+|+++|+.|.+.   .+.+.+.+.. ..+..++||++++|.++..
T Consensus        52 ~~~~~~~E~~~L~~L~~~~~v~VP~~~~~~~~~~g~~~~v~e~i~G~~l~~  102 (306)
T 3tdw_A           52 GADELNKEIQLLPLLVGCVKVNIPQYVYIGKRSDGNPFVGYRKVQGQILGE  102 (306)
T ss_dssp             HHHHHHHHHHHHHHHTTTCSSBCCCEEEEEECTTSCEEEEEECCCSEECHH
T ss_pred             HHHHHHHHHHHHHHHHhcCCCCCCCeEeecccCCCceEEEEeccCCeECch
Confidence            356788999999999653   2445566553 3456789999999988866


No 263
>3ovc_A Hygromycin-B 4-O-kinase; aminoglycoside phosphotransferase, structural genomics, PSI- protein structure initiative; HET: HY0 PE4; 1.95A {Escherichia coli} PDB: 3tyk_A*
Probab=97.64  E-value=0.0001  Score=60.29  Aligned_cols=43  Identities=7%  Similarity=-0.011  Sum_probs=32.1

Q ss_pred             HHHHHHHHHHhcCCCc--ccceeeeeeeC-CcceEEEEecCCCCHH
Q 044022           15 SCINNITYAAQMSHNH--ILKRIGCCLQT-PIPILVFQSVEYGTLR   57 (241)
Q Consensus        15 ~~~~e~~~l~~l~h~~--iv~~~~~~~~~-~~~~lv~e~~~~~sL~   57 (241)
                      .+.+|+.+++.|....  +.+++.++... +..++|||+++|.++.
T Consensus        77 ~~~~E~~~l~~L~~~gvpvP~vl~~~~~~~g~~~lv~e~l~G~~l~  122 (362)
T 3ovc_A           77 GFYKDRYVYRHFASAALPIPEVLDIGEFSESLTYCISRRAQGVTLQ  122 (362)
T ss_dssp             HHHHHHHHHHHHCCSSSCCCCEEEEEESSSSCEEEEEECCCSEETT
T ss_pred             hHHHHHHHHHHHHhcCCCCceEEEeccCCCCCeEEEEEecCCCCcc
Confidence            5889999999996543  45667766544 5689999999976654


No 264
>3ats_A Putative uncharacterized protein; hypothetical protein, putative aminoglycoside phosphortransf transferase; 1.67A {Mycobacterium tuberculosis} PDB: 3att_A*
Probab=97.61  E-value=9.9e-05  Score=60.04  Aligned_cols=45  Identities=9%  Similarity=-0.079  Sum_probs=32.8

Q ss_pred             HHHHHHHHHHHhcCC---CcccceeeeeeeC---CcceEEEEecCCCCHHH
Q 044022           14 GSCINNITYAAQMSH---NHILKRIGCCLQT---PIPILVFQSVEYGTLRD   58 (241)
Q Consensus        14 ~~~~~e~~~l~~l~h---~~iv~~~~~~~~~---~~~~lv~e~~~~~sL~~   58 (241)
                      ..+.+|+.+++.|..   -.+.+++.++...   +..++|||+++|.++.+
T Consensus        72 ~~~~~E~~~l~~L~~~~~vpvP~v~~~~~~~~~~g~~~~v~e~l~G~~l~~  122 (357)
T 3ats_A           72 YRLDHQFEVIRLVGELTDVPVPRVRWIETTGDVLGTPFFLMDYVEGVVPPD  122 (357)
T ss_dssp             CCHHHHHHHHHHHHHHCCSCCCCEEEEECSSTTTSSCEEEEECCCCBCCCB
T ss_pred             hHHHHHHHHHHHHhhcCCCCCCcEEEEccCCCccCCceEEEEecCCCChhh
Confidence            467889999998842   3466778777654   35689999999877653


No 265
>3d1u_A Putative fructosamine-3-kinase; YP_290396.1, structural genomics, joint center for structural genomics, JCSG, protein structure initiative; 1.85A {Thermobifida fusca} PDB: 3f7w_A
Probab=97.01  E-value=0.0025  Score=50.31  Aligned_cols=41  Identities=10%  Similarity=-0.062  Sum_probs=31.9

Q ss_pred             cHHHHHHHHHHHHhcCCC---cccceeeeeeeCCcceEEEEecCCCCH
Q 044022           12 TYGSCINNITYAAQMSHN---HILKRIGCCLQTPIPILVFQSVEYGTL   56 (241)
Q Consensus        12 ~~~~~~~e~~~l~~l~h~---~iv~~~~~~~~~~~~~lv~e~~~~~sL   56 (241)
                      ....|.+|++.|+.|++.   .+++++++.    ..++||||++++++
T Consensus        54 ~~~~~~~E~~~L~~L~~~~~v~vP~v~~~~----~~~lvme~l~g~~~   97 (288)
T 3d1u_A           54 LDGLFRAEALGLDWLGRSFGSPVPQVAGWD----DRTLAMEWVDERPP   97 (288)
T ss_dssp             CTTHHHHHHHHHHHHTCSTTCCSCCEEEEE----TTEEEEECCCCCCC
T ss_pred             hhHHHHHHHHHHHHHHhcCCCCcCeEEEec----CcEEEEEecccCCC
Confidence            346789999999999775   466677653    46899999998764


No 266
>2q83_A YTAA protein; 2635576, structural genomics, joint center for structu genomics, JCSG, protein structure initiative, PSI-2, transf; HET: ADN CIT UNL; 2.50A {Bacillus subtilis}
Probab=96.90  E-value=0.0052  Score=49.21  Aligned_cols=32  Identities=16%  Similarity=0.128  Sum_probs=28.4

Q ss_pred             CCCceeccCCCCCeeecCCCCeEEeeccCcee
Q 044022           86 PRPIVLRNFKTQNILFNEENVAKWFDFLLSIS  117 (241)
Q Consensus        86 ~~~ivh~dl~~~nil~~~~~~~~l~df~~~~~  117 (241)
                      ...++|+|+.+.||+++.++.+.|+||+.+..
T Consensus       221 ~~~l~HgD~~~~Nil~~~~~~~~lIDfe~a~~  252 (346)
T 2q83_A          221 SPNLCHQDYGTGNTLLGENEQIWVIDLDTVSF  252 (346)
T ss_dssp             SCCEECSSCSTTSEEECGGGCEEECCCTTCEE
T ss_pred             cCceecCCCCcccEEEeCCCcEEEEehhhccc
Confidence            57899999999999998888899999987753


No 267
>3csv_A Aminoglycoside phosphotransferase; YP_614837.1, phosphotransferase enzyme family, structural genomics, JOIN for structural genomics, JCSG; HET: MSE; 2.15A {Silicibacter SP}
Probab=96.72  E-value=0.0034  Score=50.40  Aligned_cols=34  Identities=26%  Similarity=0.226  Sum_probs=28.5

Q ss_pred             CCCceeccCCCCCeeecCC----CCeEEeeccCceecC
Q 044022           86 PRPIVLRNFKTQNILFNEE----NVAKWFDFLLSISIP  119 (241)
Q Consensus        86 ~~~ivh~dl~~~nil~~~~----~~~~l~df~~~~~~~  119 (241)
                      ...++|+|+.+.||+++.+    +.+.|+||+.+....
T Consensus       182 ~~~lvHgD~~~~Nil~~~~~~~~~~~~lIDf~~a~~G~  219 (333)
T 3csv_A          182 DMVFVHRDFHAQNLLWLPEREGLARVGVIDFQDAKLGH  219 (333)
T ss_dssp             CCEEECSCCSGGGEEECTTSCGGGGEEECCCTTCEEEC
T ss_pred             CCeeEeCCcCcccEEeccCcCCCCCeEEEeCCCcCcCC
Confidence            5579999999999999874    678999999886543


No 268
>2olc_A MTR kinase, methylthioribose kinase; kinase ADP-2HO complex, transferase; HET: CPS ADP; 2.00A {Bacillus subtilis} SCOP: d.144.1.6 PDB: 2pu8_A* 2pui_A* 2pul_A* 2pun_A* 2pup_A*
Probab=96.47  E-value=0.0049  Score=50.77  Aligned_cols=31  Identities=16%  Similarity=0.219  Sum_probs=26.0

Q ss_pred             CCCceeccCCCCCeeecCCCCeEEeeccCcee
Q 044022           86 PRPIVLRNFKTQNILFNEENVAKWFDFLLSIS  117 (241)
Q Consensus        86 ~~~ivh~dl~~~nil~~~~~~~~l~df~~~~~  117 (241)
                      ...++|+|+.+.||+++.+ .+.++||..+..
T Consensus       226 ~~~L~HGDl~~~Nil~~~~-~~~lID~e~a~~  256 (397)
T 2olc_A          226 AETLIHGDLHTGSIFASEH-ETKVIDPEFAFY  256 (397)
T ss_dssp             CCEEECSCCSGGGEEECSS-CEEECCCTTCEE
T ss_pred             CCceeeCCCCcCcEEEeCC-CeEEEeCccccc
Confidence            4578999999999999865 488999987754


No 269
>3feg_A Choline/ethanolamine kinase; non-protein kinase, choline kinase, structural genomics CONS SGC, hemicholinium-3, phosphorylation; HET: HC7 ADP AMP; 1.30A {Homo sapiens} PDB: 3lq3_A* 2ig7_A*
Probab=96.43  E-value=0.0034  Score=51.52  Aligned_cols=31  Identities=26%  Similarity=0.310  Sum_probs=26.5

Q ss_pred             CCCceeccCCCCCeeecCC----CCeEEeeccCce
Q 044022           86 PRPIVLRNFKTQNILFNEE----NVAKWFDFLLSI  116 (241)
Q Consensus        86 ~~~ivh~dl~~~nil~~~~----~~~~l~df~~~~  116 (241)
                      ...++|+|+.+.||+++.+    +.+.++||..+.
T Consensus       219 ~~~~~H~D~~~~Nil~~~~~~~~~~~~~IDwE~a~  253 (379)
T 3feg_A          219 PVVFCHNDIQEGNILLLSEPENADSLMLVDFEYSS  253 (379)
T ss_dssp             CEEEECSCCCGGGEEEESCC---CCEEECCCTTCE
T ss_pred             CcEEEcCCCCCCeEEEcCCCCccCcEEEEecccCC
Confidence            3468999999999999876    688999998774


No 270
>3jr1_A Putative fructosamine-3-kinase; YP_719053.1, structural genomics, joint center for structural genomics, JCSG; HET: MSE UNL; 2.32A {Haemophilus somnus 129PT}
Probab=96.37  E-value=0.0082  Score=47.90  Aligned_cols=44  Identities=7%  Similarity=-0.022  Sum_probs=35.3

Q ss_pred             HHHHHHHHHHHHhcC---CCcccceeeeeeeCCcceEEEEecCCCCH
Q 044022           13 YGSCINNITYAAQMS---HNHILKRIGCCLQTPIPILVFQSVEYGTL   56 (241)
Q Consensus        13 ~~~~~~e~~~l~~l~---h~~iv~~~~~~~~~~~~~lv~e~~~~~sL   56 (241)
                      ...+..|+..|+.|.   ...+++++.+....+..++|||++++.++
T Consensus        72 ~~~~~~E~~~L~~L~~~~~v~VP~vl~~~~~~g~~~lvme~l~G~~~  118 (312)
T 3jr1_A           72 RSMFRAEADQLALLAKTNSINVPLVYGIGNSQGHSFLLLEALNKSKN  118 (312)
T ss_dssp             HHHHHHHHHHHHHHHHTTSSBCCCEEEEEECSSEEEEEEECCCCCCC
T ss_pred             HHHHHHHHHHHHHHHhhCCCCcceEEEEeecCCceEEEEEeccCCCC
Confidence            566889999999983   25677888888777889999999987654


No 271
>3dxq_A Choline/ethanolamine kinase family protein; NP_106042.1, STR genomics, joint center for structural genomics, JCSG, prote structure initiative; HET: MSE; 2.55A {Mesorhizobium loti}
Probab=96.21  E-value=0.0031  Score=49.94  Aligned_cols=32  Identities=16%  Similarity=0.007  Sum_probs=26.0

Q ss_pred             CCCceeccCCCCCeeecCCCCeEEeeccCceec
Q 044022           86 PRPIVLRNFKTQNILFNEENVAKWFDFLLSISI  118 (241)
Q Consensus        86 ~~~ivh~dl~~~nil~~~~~~~~l~df~~~~~~  118 (241)
                      ...++|+|+.+.||+ ..++.+.++||..+...
T Consensus       172 ~~~l~HgDl~~~Nil-~~~~~~~lID~e~a~~g  203 (301)
T 3dxq_A          172 PLAACHCDPLCENFL-DTGERMWIVDWEYSGMN  203 (301)
T ss_dssp             CCEEECSCCCGGGEE-ECSSCEEECCCTTCEEE
T ss_pred             CceeeccCCCcCCEE-ECCCCEEEEecccccCC
Confidence            345899999999999 56677899999887643


No 272
>3f2s_A CK, chetk-alpha, choline kinase alpha; non-protein kinase, structural genomics consortium, SGC, hemicholinium-3, alternative splicing, cytoplasm; HET: ADP HC6; 1.70A {Homo sapiens} PDB: 3f2r_A* 3g15_A* 2i7q_A 2cko_A 2ckp_A* 2ckq_A*
Probab=96.04  E-value=0.007  Score=50.02  Aligned_cols=31  Identities=26%  Similarity=0.266  Sum_probs=26.5

Q ss_pred             CCCceeccCCCCCeeecCC------CCeEEeeccCce
Q 044022           86 PRPIVLRNFKTQNILFNEE------NVAKWFDFLLSI  116 (241)
Q Consensus        86 ~~~ivh~dl~~~nil~~~~------~~~~l~df~~~~  116 (241)
                      ...++|+|+.+.||+++.+      +.+.++||..+.
T Consensus       243 ~~v~~H~Dl~~~Nil~~~~~~~~~~~~~~lID~E~a~  279 (401)
T 3f2s_A          243 PVVFCHNDCQEGNILLLEGRENSEKQKLMLIDFEYSS  279 (401)
T ss_dssp             CEEEECSCCCGGGEEEETTGGGCSSSCEEECCCTTCE
T ss_pred             CeeEEeccCCcccEEEcCCcccCcccceEEEeeccCC
Confidence            4468899999999999876      789999998774


No 273
>1nw1_A Choline kinase (49.2 KD); phospholipid synthesis, protein kinase fold, transferase; 2.02A {Caenorhabditis elegans} SCOP: d.144.1.8
Probab=95.89  E-value=0.011  Score=49.30  Aligned_cols=39  Identities=13%  Similarity=0.049  Sum_probs=26.8

Q ss_pred             HHHHHHHHHHHhcCCCcc-cceeeeeeeCCcceEEEEecCCCCH
Q 044022           14 GSCINNITYAAQMSHNHI-LKRIGCCLQTPIPILVFQSVEYGTL   56 (241)
Q Consensus        14 ~~~~~e~~~l~~l~h~~i-v~~~~~~~~~~~~~lv~e~~~~~sL   56 (241)
                      ..+.+|..+++.|...++ .++++.+.+    .+|+||++|.+|
T Consensus       120 ~~li~E~~~l~~L~~~g~~P~l~~~~~~----g~v~e~l~G~~l  159 (429)
T 1nw1_A          120 SHLVAESVIFTLLSERHLGPKLYGIFSG----GRLEEYIPSRPL  159 (429)
T ss_dssp             HHHHHHHHHHHHHHHTTSSSCEEEEETT----EEEECCCCEEEC
T ss_pred             HHHHHHHHHHHHHHhCCCCCcEEEEeCC----CEEEEEeCCccc
Confidence            567789999998843334 567766532    389999986444


No 274
>2pyw_A Uncharacterized protein; 5-methylthioribose kinase, plant methionine recycling, refol transferase; HET: SR1 ADP; 1.90A {Arabidopsis thaliana}
Probab=93.67  E-value=0.053  Score=44.95  Aligned_cols=32  Identities=9%  Similarity=0.226  Sum_probs=28.2

Q ss_pred             CCCceeccCCCCCeeecCCCCeEEeeccCceec
Q 044022           86 PRPIVLRNFKTQNILFNEENVAKWFDFLLSISI  118 (241)
Q Consensus        86 ~~~ivh~dl~~~nil~~~~~~~~l~df~~~~~~  118 (241)
                      ...++|+|+.+.|||++.++ +.++||+.+...
T Consensus       231 ~~~liHGDl~~~Nil~~~~~-~~lID~e~a~~G  262 (420)
T 2pyw_A          231 AQALIHGDLHTGSVMVTQDS-TQVIDPEFSFYG  262 (420)
T ss_dssp             CCEEECSCCSGGGEEECSSC-EEECCCTTCEEE
T ss_pred             CCeEEecCCCCCcEEEeCCC-CEEEeCcccccC
Confidence            67899999999999998776 999999888654


No 275
>2ppq_A HSK, HK, homoserine kinase; structural genomics, MCSG, PSI-2, protein structure initiative; 2.00A {Agrobacterium tumefaciens str} SCOP: d.144.1.6
Probab=91.79  E-value=0.052  Score=43.05  Aligned_cols=32  Identities=16%  Similarity=0.452  Sum_probs=26.8

Q ss_pred             CCCceeccCCCCCeeecCCCCeEEeeccCcee
Q 044022           86 PRPIVLRNFKTQNILFNEENVAKWFDFLLSIS  117 (241)
Q Consensus        86 ~~~ivh~dl~~~nil~~~~~~~~l~df~~~~~  117 (241)
                      ..+++|+|+.+.||+++.+..+.++||+.+..
T Consensus       186 ~~~liHgDl~~~Nil~~~~~~~~lIDf~~a~~  217 (322)
T 2ppq_A          186 PAGVIHADLFQDNVFFLGDELSGLIDFYFACN  217 (322)
T ss_dssp             CEEEECSCCCGGGEEEETTEEEEECCCTTCEE
T ss_pred             CcccCCCCCCccCEEEeCCceEEEecchhccC
Confidence            45689999999999998876668999987753


No 276
>4ann_A ESSB; membrane protein, membrane secretion, ESS type VII secretion virulence; 1.05A {Staphylococcus aureus subsp}
Probab=91.54  E-value=0.34  Score=36.18  Aligned_cols=122  Identities=7%  Similarity=-0.018  Sum_probs=77.5

Q ss_pred             HHHHHHhcCCCcccceeeeeeeCCcceEEEEecC-CCCHHHhhcCCCchHHHHHHHHHHHhchhhcCCCCCceeccCCCC
Q 044022           19 NITYAAQMSHNHILKRIGCCLQTPIPILVFQSVE-YGTLRDCIFGAPLPRLKIASDIVNSLAYLHFGFPRPIVLRNFKTQ   97 (241)
Q Consensus        19 e~~~l~~l~h~~iv~~~~~~~~~~~~~lv~e~~~-~~sL~~~l~~~~~~~~~~~~~i~~~l~~lh~~~~~~ivh~dl~~~   97 (241)
                      |+.+|.. .||++++. .+-...+.+.+.++.-+ +-++...-+.....+++++.+|+....+++     .-+|--+.|+
T Consensus        36 el~LL~~-~~~~Fl~~-~I~e~eD~v~~~y~~~~~~~~f~~ik~~~~~eKlr~l~ni~~l~~~~~-----~r~tf~L~P~  108 (215)
T 4ann_A           36 LMYLLEQ-HSPYFIDA-ELTELRDSFQIHYDINDNHTPFDNIKSFTKNEKLRYLLNIKNLEEVNR-----TRYTFVLAPD  108 (215)
T ss_dssp             GGGGGGS-CCTTBCCE-EEEECSSEEEEEECCCTTSEEGGGGGGSCHHHHHHHHHHGGGGGGGGG-----SSEECCCSGG
T ss_pred             HHHHHhc-cCCcccce-EEEEcccEEEEEEEcCcccCCHHHHHhcCHHHHHHHHHHHHHHHHHhc-----CceEEEEecc
Confidence            3333333 67888877 45555665555555433 234444333333468888989888776665     3478899999


Q ss_pred             CeeecCCCCeEEeeccCceecCCCCcceeecccccCCCccCcccccccCCCcchhhH-HHHHHHHHHHhcCccccc
Q 044022           98 NILFNEENVAKWFDFLLSISIPEGETHITTDRVIGTRGYSAPEYISICVLNEKSNVF-SFGAFLFELLAGRIHIWD  172 (241)
Q Consensus        98 nil~~~~~~~~l~df~~~~~~~~~~~~~~~~~~~~~~~~~aPE~~~~~~~~~~~Di~-s~G~~~~~~~~g~~p~~~  172 (241)
                      |++++.++.+++.--|+...+                   +|.     .+ ...|.| ..=+++..+++++..|.+
T Consensus       109 NL~f~~~~~p~i~~RGik~~l-------------------~P~-----~~-~ee~fL~qyKAliiall~~K~~Fe~  159 (215)
T 4ann_A          109 ELFFTRDGLPIAKTRGLQNVV-------------------DPL-----PV-SEAEFLTRYKALVICAFNEKQSFDA  159 (215)
T ss_dssp             GEEECTTSCEEESCCEETTTB-------------------SCC-----CC-CHHHHHHHHHHHHHHHHCTTCCHHH
T ss_pred             eEEEcCCCCEEEEEccCccCC-------------------CCC-----CC-CHHHHHHHHHHHHHHHHcCCCCHHH
Confidence            999999999999887654221                   221     11 222333 567778888889888854


No 277
>4ano_A ESSB; membrane protein, membrane secretion, ESS type V secretion S; HET: MSE; 1.70A {Geobacillus thermodenitrificans ng80-2organism_taxid}
Probab=89.67  E-value=1  Score=33.71  Aligned_cols=114  Identities=13%  Similarity=0.113  Sum_probs=73.1

Q ss_pred             CCCcccceeeeeeeCCcceEEEEecC-CCCHHHhhcCCCchHHHHHHHHHHHhc-hhhcCCCCCceeccCCCCCeeecCC
Q 044022           27 SHNHILKRIGCCLQTPIPILVFQSVE-YGTLRDCIFGAPLPRLKIASDIVNSLA-YLHFGFPRPIVLRNFKTQNILFNEE  104 (241)
Q Consensus        27 ~h~~iv~~~~~~~~~~~~~lv~e~~~-~~sL~~~l~~~~~~~~~~~~~i~~~l~-~lh~~~~~~ivh~dl~~~nil~~~~  104 (241)
                      .||++  -..+-..++.+.+.++.-+ +-++...-......+++++.+++.... +++     .-+|--+.|+|++++.+
T Consensus        48 ~~~~f--~~~I~~~eD~~~i~y~~~~~~~~f~~i~~~~~~eKlrll~nl~~L~~~~~~-----~r~tf~l~P~NL~f~~~  120 (219)
T 4ano_A           48 VDPCI--VRDIDVSEDEVKVVIKPPSSFLTFAAIRKTTLLSRIRAAIHLVSKVKHHSA-----RRLIFIVCPENLMFNRA  120 (219)
T ss_dssp             SCSSS--EEEEEECSSEEEEEEECCTTCEEHHHHHTSCHHHHHHHHHHHHHHHSSCCS-----SSEECCCCGGGEEECTT
T ss_pred             cCCCC--CeEEEEeCCEEEEEEEcCcccCcHHHHHhcCHHHHHHHHHHHHHHHHHhhh-----CceeEEEeCceEEEeCC
Confidence            67777  3333345666666666543 234444433333468888888887776 555     45788899999999999


Q ss_pred             CCeEEeeccCceecCCCCcceeecccccCCCccCcccccccCCCcchhhH-HHHHHHHHHHhcCccccc
Q 044022          105 NVAKWFDFLLSISIPEGETHITTDRVIGTRGYSAPEYISICVLNEKSNVF-SFGAFLFELLAGRIHIWD  172 (241)
Q Consensus       105 ~~~~l~df~~~~~~~~~~~~~~~~~~~~~~~~~aPE~~~~~~~~~~~Di~-s~G~~~~~~~~g~~p~~~  172 (241)
                      +.+++...|+-..                   ++|..      ....|.| ..=+++..++.++..|.+
T Consensus       121 ~~p~i~hRGi~~~-------------------lpP~e------~~ee~fl~qyKali~all~~K~~Fe~  164 (219)
T 4ano_A          121 LEPFFLHVGVKES-------------------LPPDE------WDDERLLREVKATVLALTEGEYRFDE  164 (219)
T ss_dssp             CCEEESCCEETTT-------------------BSSCS------CCHHHHHHHHHHHHHHHTTCSSCHHH
T ss_pred             CcEEEEEcCCccc-------------------CCCCC------CCHHHHHHHHHHHHHHHHcCCCCHHH
Confidence            9999998775422                   22211      1223443 566777888888877754


No 278
>1zyl_A Hypothetical protein YIHE; putative protein kinase, structural genomics, PSI, protein structure initiative; 2.80A {Escherichia coli} SCOP: d.144.1.6
Probab=89.25  E-value=0.14  Score=40.55  Aligned_cols=30  Identities=13%  Similarity=0.112  Sum_probs=25.6

Q ss_pred             CCCceeccCCCCCeeecCCCCeEEeeccCcee
Q 044022           86 PRPIVLRNFKTQNILFNEENVAKWFDFLLSIS  117 (241)
Q Consensus        86 ~~~ivh~dl~~~nil~~~~~~~~l~df~~~~~  117 (241)
                      ...++|+|+++.||+++ + .+.++||+.+..
T Consensus       194 ~~~l~HgD~~~~Nil~~-~-~~~lIDfe~a~~  223 (328)
T 1zyl_A          194 TVLRLHGDCHAGNILWR-D-GPMFVDLDDARN  223 (328)
T ss_dssp             CCEECCSSCSGGGEEES-S-SEEECCCTTCCE
T ss_pred             CeeeeeCCCCcccEeEc-C-CCEEEECCCCCc
Confidence            45689999999999998 4 889999987754


No 279
>3i1a_A Spectinomycin phosphotransferase; protein kinase, aminoglycoside phosphotransferase, antibiotic resistance; HET: MES PG4; 1.70A {Legionella pneumophila} PDB: 3i0q_A* 3i0o_A* 3q2m_A*
Probab=89.09  E-value=0.26  Score=39.53  Aligned_cols=33  Identities=12%  Similarity=0.138  Sum_probs=28.3

Q ss_pred             CCCceeccCCCCCeeecCCCCeEEeeccCceec
Q 044022           86 PRPIVLRNFKTQNILFNEENVAKWFDFLLSISI  118 (241)
Q Consensus        86 ~~~ivh~dl~~~nil~~~~~~~~l~df~~~~~~  118 (241)
                      ...++|+|+.+.|++++.++.+.++||+.+...
T Consensus       205 ~~~~~HgD~~~~N~l~~~~~~~~~iD~e~~~~~  237 (339)
T 3i1a_A          205 KYVLCHSDIHAGNVLVGNEESIYIIDWDEPMLA  237 (339)
T ss_dssp             GCEEECSCCCGGGEEECGGGCEEECCCSSCEEE
T ss_pred             CceeEeCCCCcCCEEEeCCCeEEEEECCCCeeC
Confidence            456899999999999998888999999877543


No 280
>3c5i_A Choline kinase; choline, kinase, malaria, transferase, structural genomics, structural genomics consortium; 2.20A {Plasmodium knowlesi} PDB: 3fi8_A*
Probab=87.92  E-value=0.24  Score=40.08  Aligned_cols=31  Identities=16%  Similarity=0.169  Sum_probs=24.8

Q ss_pred             CCCceeccCCCCCeeecCCCCeEEeeccCcee
Q 044022           86 PRPIVLRNFKTQNILFNEENVAKWFDFLLSIS  117 (241)
Q Consensus        86 ~~~ivh~dl~~~nil~~~~~~~~l~df~~~~~  117 (241)
                      ...++|+|+.+.||+++.+. +.++||+.+..
T Consensus       211 ~~~l~HgDl~~~Nil~~~~~-~~lID~e~a~~  241 (369)
T 3c5i_A          211 TIVFCHNDLQENNIINTNKC-LRLIDFEYSGF  241 (369)
T ss_dssp             CEEEECSCCCGGGEEECC-C-EEECCCTTCEE
T ss_pred             CeEEEeCCCCcccEEecCCc-EEEEEecCCCC
Confidence            34689999999999997654 89999987753


No 281
>3oja_A Leucine-rich immune molecule 1; coiled-coil, helix-loop-helix, leucine-rich repeat, protein; HET: NAG MAN; 2.70A {Anopheles gambiae}
Probab=87.74  E-value=0.043  Score=46.48  Aligned_cols=32  Identities=6%  Similarity=-0.220  Sum_probs=25.8

Q ss_pred             ccHHHHHHHHHHHHhcCCCcccceeeeeeeCC
Q 044022           11 HTYGSCINNITYAAQMSHNHILKRIGCCLQTP   42 (241)
Q Consensus        11 ~~~~~~~~e~~~l~~l~h~~iv~~~~~~~~~~   42 (241)
                      .+.++|..|++.+.+++|+|+|++.|||....
T Consensus       321 ~g~~eF~~Eve~L~~i~HrNLV~L~gyC~s~~  352 (487)
T 3oja_A          321 QGSETERLECERENQARQREIDALKEQYRTVI  352 (487)
T ss_dssp             ----CHHHHHHHHHHHHHHHHHHHHHHTCCCC
T ss_pred             ccHHHHHHHHHHHhcccccchhhHHHHhcChH
Confidence            45778999999999999999999999997643


No 282
>2yle_A Protein spire homolog 1; actin-binding protein, actin polymerization; 1.80A {Homo sapiens} PDB: 2ylf_A 3r7g_A 3rbw_A
Probab=86.80  E-value=1.7  Score=32.53  Aligned_cols=98  Identities=12%  Similarity=-0.004  Sum_probs=57.3

Q ss_pred             CCHHHhhcCCC--c---hHHHHHHHHHHHhchhhcCCCCCceeccCCCCCeeecCCCCeEEeeccCceecCCCCcceeec
Q 044022           54 GTLRDCIFGAP--L---PRLKIASDIVNSLAYLHFGFPRPIVLRNFKTQNILFNEENVAKWFDFLLSISIPEGETHITTD  128 (241)
Q Consensus        54 ~sL~~~l~~~~--~---~~~~~~~~i~~~l~~lh~~~~~~ivh~dl~~~nil~~~~~~~~l~df~~~~~~~~~~~~~~~~  128 (241)
                      .||.+.|+...  .   +.+.++.|.+.+|.-+-.  ...-..+=+.|..|++..+|.+.+.+ ..+.            
T Consensus        33 vSL~eIL~~~~~PlsEEqaWALc~Qc~~~L~~~~~--~~~~~~~i~~~~~i~l~~dG~V~f~~-~~s~------------   97 (229)
T 2yle_A           33 LSLEEILRLYNQPINEEQAWAVCYQCCGSLRAAAR--RRQPRHRVRSAAQIRVWRDGAVTLAP-AADD------------   97 (229)
T ss_dssp             EEHHHHHHHHTSCCCHHHHHHHHHHHHHHHHHHHH--TTCCCCCCCSGGGEEEETTSCEEECC-C---------------
T ss_pred             ccHHHHHHHcCCCcCHHHHHHHHHHHHHHHHhhhh--cccCCceecCCcceEEecCCceeccc-cccc------------
Confidence            47888876542  2   678888888888776521  11111233456888899998887653 1110            


Q ss_pred             ccccCCCccCcccccccCCCcchhhHHHHHHHHHHHhcCcc
Q 044022          129 RVIGTRGYSAPEYISICVLNEKSNVFSFGAFLFELLAGRIH  169 (241)
Q Consensus       129 ~~~~~~~~~aPE~~~~~~~~~~~Di~s~G~~~~~~~~g~~p  169 (241)
                        .....+.|||... ...+.+.-|||+|+++|.-+--..|
T Consensus        98 --~~~~~~~~pe~~~-~~~te~~~IysLG~tLY~ALDygL~  135 (229)
T 2yle_A           98 --AGEPPPVAGKLGY-SQCMETEVIESLGIIIYKALDYGLK  135 (229)
T ss_dssp             -----------CCSS-SSSCHHHHHHHHHHHHHHHHTTTCC
T ss_pred             --ccccCCCChhhcc-ccchHHHHHHHHHHHHHHHhhcCCC
Confidence              0122356777764 3445777899999999998875544


No 283
>2qg7_A Ethanolamine kinase PV091845; malaria, SGC, structural genomics consortium, transferase; 2.41A {Plasmodium vivax}
Probab=86.62  E-value=0.35  Score=40.66  Aligned_cols=36  Identities=8%  Similarity=-0.119  Sum_probs=25.5

Q ss_pred             HHHHHHHHhcCCCcc-cceeeeeeeCCcceEEEEecCCCCH
Q 044022           17 INNITYAAQMSHNHI-LKRIGCCLQTPIPILVFQSVEYGTL   56 (241)
Q Consensus        17 ~~e~~~l~~l~h~~i-v~~~~~~~~~~~~~lv~e~~~~~sL   56 (241)
                      .+|..+++.|...++ .++++.+.  +  .+|+||++|.+|
T Consensus       152 ~~E~~vl~~L~~~gl~P~ll~~~~--~--G~v~e~I~G~~l  188 (458)
T 2qg7_A          152 EREKKISCILYNKNIAKKIYVFFT--N--GRIEEFMDGYAL  188 (458)
T ss_dssp             HHHHHHHHHHTTSSSBCCEEEEET--T--EEEEECCCSEEC
T ss_pred             HHHHHHHHHHHhcCCCCCEEEEeC--C--eEEEEeeCCccC
Confidence            589999999965455 46777762  2  359999987544


No 284
>3g15_A CK, chetk-alpha, choline kinase alpha; non-protein kinase, structural genomics CONS SGC, hemicholinium-3, transferase; HET: ADP HC6; 1.70A {Homo sapiens} PDB: 3f2r_A* 2i7q_A 2cko_A 2ckp_A* 2ckq_A*
Probab=82.60  E-value=0.67  Score=38.07  Aligned_cols=29  Identities=24%  Similarity=0.287  Sum_probs=24.3

Q ss_pred             ceeccCCCCCeee------cCCCCeEEeeccCcee
Q 044022           89 IVLRNFKTQNILF------NEENVAKWFDFLLSIS  117 (241)
Q Consensus        89 ivh~dl~~~nil~------~~~~~~~l~df~~~~~  117 (241)
                      ++|+|+.+.||++      +....+.++||..+..
T Consensus       246 fcHnDl~~gNil~~~~~~~~~~~~l~vIDwEya~~  280 (401)
T 3g15_A          246 FCHNDCQEGNILLLEGRENSEKQKLMLIDFEYSSY  280 (401)
T ss_dssp             EECSCCCGGGEEEETTGGGCSSCCEEECCCTTCEE
T ss_pred             eEEecCCCCeEEEecCcccCcCCeEEEechHhccC
Confidence            5799999999999      4467799999988753


No 285
>3mes_A Choline kinase; malaria, structural genomics, structural genomics consortium, SGC, transferase; HET: ADP DME PT3; 2.35A {Cryptosporidium parvum}
Probab=77.70  E-value=1  Score=37.45  Aligned_cols=31  Identities=16%  Similarity=0.273  Sum_probs=26.4

Q ss_pred             CCCceeccCCCCCeeecCCCCeEEeeccCcee
Q 044022           86 PRPIVLRNFKTQNILFNEENVAKWFDFLLSIS  117 (241)
Q Consensus        86 ~~~ivh~dl~~~nil~~~~~~~~l~df~~~~~  117 (241)
                      ...++|+|+.+.|++ +.++.+.++||..+..
T Consensus       261 ~~~~~H~D~~~~N~l-~~~~~~~~IDwe~a~~  291 (424)
T 3mes_A          261 SLVFAHNDLQENNLL-QTQNNIRMIDYEYSAI  291 (424)
T ss_dssp             CEEEECSCCCGGGEE-ECSSCEEECCCTTCEE
T ss_pred             CceEECCCCCcccee-cCCCcEEEEecccCCc
Confidence            345899999999999 7788999999988753


No 286
>3f7w_A Putative fructosamine-3-kinase; YP_290396.1, structural GENO joint center for structural genomics, JCSG, protein structu initiative, PSI-2; 1.85A {Thermobifida fusca YX}
Probab=68.17  E-value=1.7  Score=33.67  Aligned_cols=25  Identities=16%  Similarity=0.368  Sum_probs=20.0

Q ss_pred             CCCceeccCCCCCeeecCCCCeEEee
Q 044022           86 PRPIVLRNFKTQNILFNEENVAKWFD  111 (241)
Q Consensus        86 ~~~ivh~dl~~~nil~~~~~~~~l~d  111 (241)
                      ...++|+|+.+.|++++.++. .+.|
T Consensus       187 ~p~LvHGDlw~gNvl~~~~g~-~~iD  211 (288)
T 3f7w_A          187 PPARIHGDLWNGNVLWQDDGA-VVID  211 (288)
T ss_dssp             CCEEECSCCSGGGEEEETTEE-EECS
T ss_pred             CCeeeecCCCCCcEEEcCCCe-EEEe
Confidence            346999999999999998873 4555


No 287
>2qg7_A Ethanolamine kinase PV091845; malaria, SGC, structural genomics consortium, transferase; 2.41A {Plasmodium vivax}
Probab=38.97  E-value=57  Score=27.13  Aligned_cols=32  Identities=25%  Similarity=0.305  Sum_probs=19.5

Q ss_pred             CCCCHHHhhcCCCc-----hHHHHHHHHHHHhchhhc
Q 044022           52 EYGTLRDCIFGAPL-----PRLKIASDIVNSLAYLHF   83 (241)
Q Consensus        52 ~~~sL~~~l~~~~~-----~~~~~~~~i~~~l~~lh~   83 (241)
                      ++|-+..++.....     ....++..++..|+-||.
T Consensus       175 ~~G~v~e~I~G~~l~~~~l~~~~~~~~ia~~La~LH~  211 (458)
T 2qg7_A          175 TNGRIEEFMDGYALSREDIKNPKFQKLIAKNLKLLHD  211 (458)
T ss_dssp             TTEEEEECCCSEECCTTTTTSHHHHHHHHHHHHHHHT
T ss_pred             CCeEEEEeeCCccCChhhcCCHHHHHHHHHHHHHHhc
Confidence            45556666543211     123567788899999994


No 288
>3mes_A Choline kinase; malaria, structural genomics, structural genomics consortium, SGC, transferase; HET: ADP DME PT3; 2.35A {Cryptosporidium parvum}
Probab=32.15  E-value=41  Score=27.73  Aligned_cols=59  Identities=14%  Similarity=0.060  Sum_probs=38.7

Q ss_pred             HHHHHHHHHhcC-CCcccceeeeeeeCCcceEEEEecCCCCHHHhhcCCCchHHHHHHHHHHHhchhh
Q 044022           16 CINNITYAAQMS-HNHILKRIGCCLQTPIPILVFQSVEYGTLRDCIFGAPLPRLKIASDIVNSLAYLH   82 (241)
Q Consensus        16 ~~~e~~~l~~l~-h~~iv~~~~~~~~~~~~~lv~e~~~~~sL~~~l~~~~~~~~~~~~~i~~~l~~lh   82 (241)
                      ..+|.++++.|. +.-..++++.+  .  .++|+||++|.+|..-    ......++.+++..|+-||
T Consensus       120 R~~E~~~l~~L~~~gi~P~l~~~~--~--~~~I~efI~G~~l~~~----~l~~~~~~~~ia~~La~LH  179 (424)
T 3mes_A          120 SKVELDVFRYLSNINIAPNIIADF--P--EGRIEEFIDGEPLTTK----QLQLTHICVEVAKNMGSLH  179 (424)
T ss_dssp             HHHHHHHHHHHHHTTSSCCEEEEE--T--TEEEEECCCSEECCTG----GGGSHHHHHHHHHHHHHHH
T ss_pred             HHHHHHHHHHHHhcCCCCCEEEEc--C--CCEEEEEeCCccCChh----hcCCHHHHHHHHHHHHHHh
Confidence            357899998884 33334566543  2  3789999997654321    1122356788999999999


No 289
>2x6h_A GH13170P, VPS34, phosphotidylinositol 3 kinase 59F; transferase; 2.90A {Drosophila melanogaster} PDB: 2x6f_A 2x6i_A* 2x6j_A* 2x6k_A*
Probab=22.69  E-value=52  Score=29.13  Aligned_cols=25  Identities=16%  Similarity=0.199  Sum_probs=22.2

Q ss_pred             ccCCCCCeeecCCCCeEEeeccCce
Q 044022           92 RNFKTQNILFNEENVAKWFDFLLSI  116 (241)
Q Consensus        92 ~dl~~~nil~~~~~~~~l~df~~~~  116 (241)
                      +|=.+.|||++..|.+.=+|||.+-
T Consensus       551 GDRH~~NILid~tG~v~HIDFG~~f  575 (696)
T 2x6h_A          551 GDRHLDNLLLTTNGKLFHIDFGYIL  575 (696)
T ss_dssp             CCCCTTTEEECTTSCEEECCCCSCT
T ss_pred             CCCCCcceEEeCCCCEEEEeehhhh
Confidence            4777899999999999999999874


No 290
>3arc_T Photosystem II reaction center protein T; PSII, membrane-protein complex, transmembrane alpha-helix, E transport, photosynthesis; HET: OEX CLA PHO BCR PL9 SQD LMG UNL LMT HTG DGD LHG HEM; 1.90A {Thermosynechococcus vulcanus} PDB: 1s5l_T* 2axt_T* 3bz1_T* 3bz2_T* 3kzi_T* 3prq_T* 3prr_T* 3a0b_T* 3a0h_T*
Probab=20.62  E-value=90  Score=15.25  Aligned_cols=16  Identities=13%  Similarity=0.249  Sum_probs=12.7

Q ss_pred             HHHHHHHHHHHhcCcc
Q 044022          154 FSFGAFLFELLAGRIH  169 (241)
Q Consensus       154 ~s~G~~~~~~~~g~~p  169 (241)
                      -.+|++++.+..+.+|
T Consensus        12 ~tlgiiFFAI~FRePP   27 (32)
T 3arc_T           12 CIIALFFFAIFFREPP   27 (32)
T ss_dssp             HHHHHHHHHHHTSCCC
T ss_pred             HHHHHHHHhhhhcCCC
Confidence            3578888888888777


Done!