BLAST Results

Query Summary

Your job contains 1 sequence.

Parameters
Threshold: 0.001
Maximum number of alignments shown: 100
BLAST filter: on

Query Sequence

>044024
MSCPYGSQCIPHNDVKGFIFEKINNNTMAPEISPSVEPQPFLPLLAPSPSTPISNSSLPK
LSGLCTLNFSAAESFVSTTATDCWASFAPYLANVVCCPQFDATMVILMGQYSKYSGMLSL
NTTNAQHCLSDFEKILETQGANRNLKTICSIHPANLTEASCPVVDANKFESIVDSSKILT
ACGKVDPVKECCQQVCQNAILDAARKIAMDGMVSMPENSTRIDDCKSIVFRWLASKLDPS
SANGVLRALSNCKVNKASKLPARPTAKPSQATAGFQVKELIVPLLLSSSLVLTALI

High Scoring Gene Products

Symbol, full name Information P value
AT1G61900 protein from Arabidopsis thaliana 8.1e-76
AT2G30700 protein from Arabidopsis thaliana 5.6e-45
AT3G19300 protein from Arabidopsis thaliana 0.00026

Back to top

Raw Blast Data

BLASTP 2.0MP-WashU [04-May-2006] [linux26-i686-ILP32F64 2006-05-09T11:47:08]

Copyright (C) 1996-2006 Washington University, Saint Louis, Missouri USA.
All Rights Reserved.

Reference:  Gish, W. (1996-2006) http://blast.wustl.edu

Query=  044024
        (296 letters)

Database:  go_20130330-seqdb.fasta
           368,745 sequences; 169,044,731 total letters.
Searching....10....20....30....40....50....60....70....80....90....100% done

                                                                     Smallest
                                                                       Sum
                                                              High  Probability
Sequences producing High-scoring Segment Pairs:              Score  P(N)      N

TAIR|locus:2036788 - symbol:AT1G61900 "AT1G61900" species...   764  8.1e-76   1
TAIR|locus:2054472 - symbol:AT2G30700 "AT2G30700" species...   473  5.6e-45   1
TAIR|locus:2090634 - symbol:AT3G19300 species:3702 "Arabi...   120  0.00026   1


>TAIR|locus:2036788 [details] [associations]
            symbol:AT1G61900 "AT1G61900" species:3702 "Arabidopsis
            thaliana" [GO:0003674 "molecular_function" evidence=ND] [GO:0005739
            "mitochondrion" evidence=ISM] [GO:0008150 "biological_process"
            evidence=ND] [GO:0031225 "anchored to membrane" evidence=TAS]
            [GO:0046658 "anchored to plasma membrane" evidence=IDA] [GO:0005886
            "plasma membrane" evidence=IDA] [GO:0009506 "plasmodesma"
            evidence=IDA] EMBL:CP002684 GenomeReviews:CT485782_GR GO:GO:0009506
            GO:GO:0046658 EMBL:AC004392 EMBL:BT002490 EMBL:AK230285
            EMBL:BT006577 IPI:IPI00521285 IPI:IPI00525242 PIR:T02135
            RefSeq:NP_176382.2 RefSeq:NP_974068.1 UniGene:At.21877 PaxDb:Q8GUI4
            PRIDE:Q8GUI4 EnsemblPlants:AT1G61900.1 GeneID:842486
            KEGG:ath:AT1G61900 TAIR:At1g61900 eggNOG:NOG258019
            HOGENOM:HOG000084383 InParanoid:Q8GUI4 OMA:VNIPERP PhylomeDB:Q8GUI4
            ProtClustDB:CLSN2679931 Genevestigator:Q8GUI4 GermOnline:AT1G61900
            Uniprot:Q8GUI4
        Length = 433

 Score = 764 (274.0 bits), Expect = 8.1e-76, P = 8.1e-76
 Identities = 134/231 (58%), Positives = 179/231 (77%)

Query:    30 PEISPSVEPQPFLPLLAPSPSTPISNSSLPKLSGLCTLNFSAAESFVSTTATDCWASFAP 89
             PEISP   PQPFLP +APSP  P  NS++PKLSGLC+LNFSA+ES + TT+ +CW  FAP
Sbjct:    34 PEISPDTSPQPFLPFIAPSPMVPYINSTMPKLSGLCSLNFSASESLIQTTSHNCWTVFAP 93

Query:    90 YLANVVCCPQFDATMVILMGQYSKYSGMLSLNTTNAQHCLSDFEKILETQGANRNLKTIC 149
              LANV+CCPQ DAT+ I++G+ SK +G+L+LN T ++HCLSD E+IL  +GA+  L  IC
Sbjct:    94 LLANVMCCPQLDATLTIILGKASKETGLLALNRTQSKHCLSDLEQILVGKGASGQLNKIC 153

Query:   150 SIHPANLTEASCPVVDANKFESIVDSSKILTACGKVDPVKECCQQVCQNAILDAARKIAM 209
             SIH +NLT +SCPV++ ++FES VD++K+L AC K+DPVKECC++ CQNAILDAA  I++
Sbjct:   154 SIHSSNLTSSSCPVINVDEFESTVDTAKLLLACEKIDPVKECCEEACQNAILDAATNISL 213

Query:   210 DGMVSMPENSTRIDDCKSIVFRWLASKLDPSSANGVLRALSNCKVNKASKL 260
                 ++ +NS RI+DCK++V RWLA+KLDPS     LR L+NCK+N+   L
Sbjct:   214 KASETLTDNSDRINDCKNVVNRWLATKLDPSRVKETLRGLANCKINRVCPL 264


>TAIR|locus:2054472 [details] [associations]
            symbol:AT2G30700 "AT2G30700" species:3702 "Arabidopsis
            thaliana" [GO:0003674 "molecular_function" evidence=ND] [GO:0005886
            "plasma membrane" evidence=ISM] [GO:0008150 "biological_process"
            evidence=ND] EMBL:CP002685 HOGENOM:HOG000084383
            ProtClustDB:CLSN2679931 EMBL:AY093146 EMBL:AK118977 IPI:IPI00519560
            RefSeq:NP_850153.1 UniGene:At.19836 PRIDE:Q8RWE3
            EnsemblPlants:AT2G30700.1 GeneID:817621 KEGG:ath:AT2G30700
            TAIR:At2g30700 InParanoid:Q8RWE3 OMA:FDPIEIS PhylomeDB:Q8RWE3
            Genevestigator:Q8RWE3 Uniprot:Q8RWE3
        Length = 480

 Score = 473 (171.6 bits), Expect = 5.6e-45, P = 5.6e-45
 Identities = 105/247 (42%), Positives = 144/247 (58%)

Query:    31 EISPSVEPQ---PFLPLLAPS-PSTPISNSSLPKLSGLCTLNFSAAESFVSTTATDCWAS 86
             ++SPSV P+   P LP   P  P+ P  ++  PKL+G C  +F A  S + T A+DC   
Sbjct:    69 QVSPSVIPKYASPALPWTPPMYPTFP--DTYEPKLTGKCPTDFQAISSVIDTAASDCSQP 126

Query:    87 FAPYLANVVCCPQFDATMVILMGQYSKYSGMLSLNTTNAQHCLSDFEKILETQGANRNLK 146
             FA  + NV+CCPQF + + I  GQ++  S  L L    A  C SD   IL ++ AN  + 
Sbjct:   127 FAALVGNVICCPQFVSLLHIFQGQHNVKSNKLVLPDAVATDCFSDIVSILVSRRANMTIP 186

Query:   147 TICSIHPANLTEASCPVVDANKFESIVDSSKILTACGKVDPVKECCQQVCQNAILDAARK 206
              +CS+  +NLT  SCPV D   FE +V+SSK+L AC  VDP+KECC+ +CQ AI++AA  
Sbjct:   187 ALCSVTSSNLTGGSCPVTDVTTFEKVVNSSKLLDACRTVDPLKECCRPICQPAIMEAALI 246

Query:   207 IAMDGMV---SMP----ENSTRIDDCKSIVFRWLASKLDPSSANGVLRALSNCKVNKASK 259
             I+   M     +P     N   I+DCK++VF +L+ KL    AN   R LS+CKVNKA  
Sbjct:   247 ISGHQMTVGDKIPLAGSNNVNAINDCKNVVFSYLSRKLPADKANAAFRILSSCKVNKACP 306

Query:   260 LPAR-PT 265
             L  + PT
Sbjct:   307 LEFKEPT 313


>TAIR|locus:2090634 [details] [associations]
            symbol:AT3G19300 species:3702 "Arabidopsis thaliana"
            [GO:0004672 "protein kinase activity" evidence=IEA] [GO:0004674
            "protein serine/threonine kinase activity" evidence=IEA]
            [GO:0005524 "ATP binding" evidence=IEA] [GO:0005886 "plasma
            membrane" evidence=ISM;IDA] [GO:0006468 "protein phosphorylation"
            evidence=IEA] [GO:0016301 "kinase activity" evidence=ISS]
            [GO:0016772 "transferase activity, transferring
            phosphorus-containing groups" evidence=IEA] InterPro:IPR000719
            InterPro:IPR008271 InterPro:IPR011009 InterPro:IPR017441
            Pfam:PF00069 PROSITE:PS00107 PROSITE:PS00108 PROSITE:PS50011
            GO:GO:0005886 GO:GO:0005524 EMBL:CP002686 GenomeReviews:BA000014_GR
            eggNOG:COG0515 SUPFAM:SSF56112 GO:GO:0004674 Gene3D:2.60.120.200
            InterPro:IPR013320 EMBL:AB025624 HSSP:Q62838 EMBL:BT015817
            EMBL:BT020204 IPI:IPI00523638 RefSeq:NP_566630.1 UniGene:At.23993
            UniGene:At.50200 ProteinModelPortal:Q9LT87 SMR:Q9LT87 PaxDb:Q9LT87
            PRIDE:Q9LT87 EnsemblPlants:AT3G19300.1 GeneID:821464
            KEGG:ath:AT3G19300 TAIR:At3g19300 HOGENOM:HOG000083709
            InParanoid:Q9LT87 OMA:SICFEPV PhylomeDB:Q9LT87
            ProtClustDB:CLSN2917186 Genevestigator:Q9LT87 Uniprot:Q9LT87
        Length = 663

 Score = 120 (47.3 bits), Expect = 0.00026, P = 0.00026
 Identities = 41/181 (22%), Positives = 78/181 (43%)

Query:    96 CCPQFDATMVILMGQYSKYSGMLSLNTTNAQHCLSDFEKILETQGANRNLKTICSIHPAN 155
             CC   +A + I + +Y+ Y+  L + +   + C++   + +E  G  RN    C +    
Sbjct:    55 CCRYMNAFVAISVARYANYTADLGVTSDLTEICITTISRTMELYGIPRNATIFCGLGTKI 114

Query:   156 LTEASC-------PVVDANKFESIVDSSKILTACGKVDPVKECCQQVCQNAILDAARKIA 208
             L    C       P++ +  F  +  + K+      + P  +C  + C N+ +   R + 
Sbjct:   115 LVNYDCEGLTTVPPMLHSTSFGDVSRNCKL-----PLPPGDQC--RNCLNSSISYLRSLV 167

Query:   209 MDGMVSMPENSTRIDDCKSIVFRWLASKLDPSSANGVLRALSNCKVNKASKLPARPTAKP 268
               G     +NS ++  C+   +  LAS++D SSA      L++C  N   +L   P + P
Sbjct:   168 --GA----DNSIKLSTCRDATYAVLASRVDNSSA----LELASCFFN-VPELSPTPGSSP 216

Query:   269 S 269
             S
Sbjct:   217 S 217


Parameters:
  V=100
  filter=SEG
  E=0.001

  ctxfactor=1.00

  Query                        -----  As Used  -----    -----  Computed  ----
  Frame  MatID Matrix name     Lambda    K       H      Lambda    K       H
   +0      0   BLOSUM62        0.317   0.129   0.391    same    same    same
               Q=9,R=2         0.244   0.0300  0.180     n/a     n/a     n/a

  Query
  Frame  MatID  Length  Eff.Length     E     S W   T  X   E2     S2
   +0      0      296       287   0.00087  115 3  11 22  0.38    34
                                                     33  0.43    37


Statistics:

  Database:  /share/blast/go-seqdb.fasta
   Title:  go_20130330-seqdb.fasta
   Posted:  5:47:42 AM PDT Apr 1, 2013
   Created:  5:47:42 AM PDT Apr 1, 2013
   Format:  XDF-1
   # of letters in database:  169,044,731
   # of sequences in database:  368,745
   # of database sequences satisfying E:  3
  No. of states in DFA:  610 (65 KB)
  Total size of DFA:  203 KB (2113 KB)
  Time to generate neighborhood:  0.00u 0.00s 0.00t   Elapsed:  00:00:00
  No. of threads or processors used:  24
  Search cpu time:  25.57u 0.09s 25.66t   Elapsed:  00:00:01
  Total cpu time:  25.57u 0.09s 25.66t   Elapsed:  00:00:01
  Start:  Sat May 11 05:09:38 2013   End:  Sat May 11 05:09:39 2013

Back to top