BLASTP 2.2.26 [Sep-21-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.


Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= 044024
         (296 letters)

Database: swissprot 
           539,616 sequences; 191,569,459 total letters

Searching..................................................done



>sp|Q8GUI4|UGPI6_ARATH Uncharacterized GPI-anchored protein At1g61900 OS=Arabidopsis
           thaliana GN=At1g61900 PE=1 SV=1
          Length = 433

 Score =  298 bits (762), Expect = 4e-80,   Method: Compositional matrix adjust.
 Identities = 134/231 (58%), Positives = 179/231 (77%)

Query: 30  PEISPSVEPQPFLPLLAPSPSTPISNSSLPKLSGLCTLNFSAAESFVSTTATDCWASFAP 89
           PEISP   PQPFLP +APSP  P  NS++PKLSGLC+LNFSA+ES + TT+ +CW  FAP
Sbjct: 34  PEISPDTSPQPFLPFIAPSPMVPYINSTMPKLSGLCSLNFSASESLIQTTSHNCWTVFAP 93

Query: 90  YLANVVCCPQFDATMVILMGQYSKYSGMLSLNTTNAQHCLSDFEKILETQGANRNLKTIC 149
            LANV+CCPQ DAT+ I++G+ SK +G+L+LN T ++HCLSD E+IL  +GA+  L  IC
Sbjct: 94  LLANVMCCPQLDATLTIILGKASKETGLLALNRTQSKHCLSDLEQILVGKGASGQLNKIC 153

Query: 150 SIHPANLTEASCPVVDANKFESIVDSSKILTACGKVDPVKECCQQVCQNAILDAARKIAM 209
           SIH +NLT +SCPV++ ++FES VD++K+L AC K+DPVKECC++ CQNAILDAA  I++
Sbjct: 154 SIHSSNLTSSSCPVINVDEFESTVDTAKLLLACEKIDPVKECCEEACQNAILDAATNISL 213

Query: 210 DGMVSMPENSTRIDDCKSIVFRWLASKLDPSSANGVLRALSNCKVNKASKL 260
               ++ +NS RI+DCK++V RWLA+KLDPS     LR L+NCK+N+   L
Sbjct: 214 KASETLTDNSDRINDCKNVVNRWLATKLDPSRVKETLRGLANCKINRVCPL 264


>sp|Q9FX99|Y1497_ARATH Probable receptor-like protein kinase At1g49730 OS=Arabidopsis
           thaliana GN=At1g49730 PE=1 SV=1
          Length = 663

 Score = 34.7 bits (78), Expect = 0.82,   Method: Compositional matrix adjust.
 Identities = 29/152 (19%), Positives = 63/152 (41%), Gaps = 15/152 (9%)

Query: 96  CCPQFDATMVILMGQYSKYSGMLSLNTTNAQHCLSDFEKILETQGANRNLKTICSIHPAN 155
           CC   +A + + + +Y+  S  L + +  ++ C++   + +E  G +RN  + C +    
Sbjct: 53  CCRYMNAFVAVSVARYANLSTNLGVTSDLSETCIASISRAMEGYGVSRNATSFCGLGTKI 112

Query: 156 LTEASCPVVDANKFESIVDSSKILTACGK-----VDPVKECCQQVCQNAILDAARKIAMD 210
           L +  C   D     + +  S       +       P  +C  + C N+ +   R     
Sbjct: 113 LVKYDC---DGRTTVTQMHQSPGFGHVSRNCRLPFSPGHQC--RKCLNSGITYLRN---- 163

Query: 211 GMVSMPENSTRIDDCKSIVFRWLASKLDPSSA 242
            ++    N+  +  C+   +  LAS++D +SA
Sbjct: 164 -LIGAETNNITLCTCRDATYATLASRIDDTSA 194


>sp|A1JKS1|RODZ_YERE8 Cytoskeleton protein RodZ OS=Yersinia enterocolitica serotype O:8 /
           biotype 1B (strain 8081) GN=rodZ PE=3 SV=2
          Length = 338

 Score = 32.7 bits (73), Expect = 3.2,   Method: Compositional matrix adjust.
 Identities = 21/59 (35%), Positives = 26/59 (44%)

Query: 26  NTMAPEISPSVEPQPFLPLLAPSPSTPISNSSLPKLSGLCTLNFSAAESFVSTTATDCW 84
           NT AP+ + S E     P  AP PS   +   LP      T   S+A+S V     DCW
Sbjct: 212 NTTAPQGTTSAESAVVSPSQAPLPSVSTAQPPLPTADAGVTGTASSADSLVMNFTADCW 270


>sp|A1L4H1|SRCRL_HUMAN Soluble scavenger receptor cysteine-rich domain-containing protein
            SSC5D OS=Homo sapiens GN=SSC5D PE=2 SV=3
          Length = 1573

 Score = 31.6 bits (70), Expect = 7.8,   Method: Composition-based stats.
 Identities = 20/58 (34%), Positives = 32/58 (55%), Gaps = 4/58 (6%)

Query: 22   KINNNTMAPEISPSVEPQPFLPLLAPSPSTPISNSSLPKLSGLCTLNFSAAESFVSTT 79
            ++++ T+AP + PS+ PQ  L   AP+P T  S S +P L     L  S + S  +T+
Sbjct: 1348 ELSSPTLAPTVKPSLHPQ--LTFTAPAPHT--STSQIPTLEPSPALESSPSRSSTATS 1401


  Database: swissprot
    Posted date:  Mar 23, 2013  2:32 AM
  Number of letters in database: 191,569,459
  Number of sequences in database:  539,616
  
Lambda     K      H
   0.318    0.130    0.388 

Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 101,727,663
Number of Sequences: 539616
Number of extensions: 3913280
Number of successful extensions: 11238
Number of sequences better than 100.0: 18
Number of HSP's better than 100.0 without gapping: 7
Number of HSP's successfully gapped in prelim test: 11
Number of HSP's that attempted gapping in prelim test: 11226
Number of HSP's gapped (non-prelim): 22
length of query: 296
length of database: 191,569,459
effective HSP length: 117
effective length of query: 179
effective length of database: 128,434,387
effective search space: 22989755273
effective search space used: 22989755273
T: 11
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
S2: 61 (28.1 bits)