Query         044025
Match_columns 129
No_of_seqs    117 out of 1029
Neff          7.8 
Searched_HMMs 13730
Date          Mon Mar 25 18:40:18 2013
Command       hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/044025.a3m -d /work/01045/syshi/HHdatabase/scop70.hhm -o /work/01045/syshi/hhsearch_scop/044025hhsearch_scop -cpu 12 -v 0 

 No Hit                             Prob E-value P-value  Score    SS Cols Query HMM  Template HMM
  1 d1wa5b_ a.118.1.1 (B:) Karyoph  99.7 3.2E-18 2.4E-22  133.9  11.1  118   12-129   345-478 (503)
  2 d1q1sc_ a.118.1.1 (C:) Importi  99.7 1.6E-17 1.1E-21  126.4  11.0  117   13-129   288-413 (434)
  3 d1q1sc_ a.118.1.1 (C:) Importi  99.5 2.3E-14 1.7E-18  108.6  11.6  122    3-127    19-147 (434)
  4 d1wa5b_ a.118.1.1 (B:) Karyoph  99.4   2E-13 1.4E-17  106.3  10.3  117    9-128    88-211 (503)
  5 d1xqra1 a.118.1.21 (A:87-350)   99.4 1.1E-12 8.2E-17   95.4   8.5  102    4-106   108-215 (264)
  6 d1xqra1 a.118.1.21 (A:87-350)   99.3 2.9E-12 2.1E-16   93.1  10.1  120    5-127    67-192 (264)
  7 d1jdha_ a.118.1.1 (A:) beta-Ca  99.3 1.4E-12 9.9E-17  101.9   8.6  119    6-127    68-191 (529)
  8 d1xm9a1 a.118.1.24 (A:244-700)  99.3   3E-12 2.2E-16   94.8   9.2   90   35-127     2-92  (457)
  9 d1xm9a1 a.118.1.24 (A:244-700)  99.3 4.5E-12 3.3E-16   93.9   9.9  103    3-106     8-116 (457)
 10 d1jdha_ a.118.1.1 (A:) beta-Ca  99.2 1.4E-10   1E-14   90.3  11.2  122    3-128   107-234 (529)
 11 d1te4a_ a.118.1.16 (A:) MTH187  98.0 3.8E-06 2.7E-10   52.6   5.6   71   13-102    38-109 (111)
 12 d1te4a_ a.118.1.16 (A:) MTH187  97.9 1.1E-05 7.9E-10   50.4   5.4   60   34-105    21-81  (111)
 13 d1qbkb_ a.118.1.1 (B:) Karyoph  97.0 0.00041   3E-08   56.3   5.7   99    4-104   443-546 (888)
 14 d2vglb_ a.118.1.10 (B:) Adapti  96.9  0.0008 5.9E-08   52.9   6.5   81   19-106   105-186 (579)
 15 d1ibrb_ a.118.1.1 (B:) Importi  96.7  0.0009 6.5E-08   48.7   4.7   71   34-105   364-435 (458)
 16 d1b3ua_ a.118.1.2 (A:) Constan  96.6   0.015 1.1E-06   44.3  11.7   68   33-104   517-585 (588)
 17 d1qbkb_ a.118.1.1 (B:) Karyoph  96.6  0.0029 2.1E-07   51.1   7.8   90   13-104   409-505 (888)
 18 d1oyza_ a.118.1.16 (A:) Hypoth  96.3  0.0078 5.7E-07   41.1   7.6   87    4-104    26-114 (276)
 19 d1b3ua_ a.118.1.2 (A:) Constan  96.3  0.0078 5.7E-07   45.9   8.2   86   19-104   264-351 (588)
 20 d1oyza_ a.118.1.16 (A:) Hypoth  96.0   0.012 8.5E-07   40.1   7.3   60   34-105    18-78  (276)
 21 d2vglb_ a.118.1.10 (B:) Adapti  95.9  0.0018 1.3E-07   50.8   2.8   98    6-104   127-226 (579)
 22 d2vgla_ a.118.1.10 (A:) Adapti  94.5   0.023 1.7E-06   44.2   5.3   79   19-105   125-207 (584)
 23 d1u6gc_ a.118.1.2 (C:) Cullin-  93.2   0.072 5.3E-06   43.5   6.1   70   34-105   961-1031(1207)
 24 d1ibrb_ a.118.1.1 (B:) Importi  93.0    0.23 1.7E-05   35.2   8.1   71   34-104   170-243 (458)
 25 d2bpta1 a.118.1.1 (A:1-861) Im  92.4    0.86 6.3E-05   34.8  11.2   68   36-104   370-438 (861)
 26 d2bpta1 a.118.1.1 (A:1-861) Im  92.2    0.27   2E-05   37.7   7.9   86   16-104   616-709 (861)
 27 d1qgra_ a.118.1.1 (A:) Importi  91.3    0.86 6.3E-05   35.0  10.0   69   35-104   366-435 (876)
 28 d2vgla_ a.118.1.10 (A:) Adapti  90.5    0.67 4.9E-05   35.5   8.7   78   19-105   343-424 (584)
 29 d1qgra_ a.118.1.1 (A:) Importi  90.0    0.84 6.1E-05   35.0   8.9   97    8-104   140-244 (876)
 30 d1u6gc_ a.118.1.2 (C:) Cullin-  89.0    0.52 3.8E-05   38.2   7.2   65   34-103    44-109 (1207)
 31 d1ho8a_ a.118.1.9 (A:) Regulat  88.4     0.3 2.2E-05   37.6   4.9   69   35-104   392-471 (477)
 32 d1wa5c_ a.118.1.1 (C:) Exporti  85.6    0.77 5.6E-05   36.1   6.1   52   11-64    472-526 (959)
 33 d1ho8a_ a.118.1.9 (A:) Regulat  84.0       3 0.00022   31.7   8.7  106   20-127   188-322 (477)
 34 d1upka_ a.118.1.15 (A:) Mo25 p  77.5     6.7 0.00049   28.3   8.2   63   28-90     62-129 (330)
 35 d2b6ca1 a.118.1.17 (A:3-215) H  76.4     2.3 0.00017   28.4   5.2   46   36-82    155-201 (213)
 36 d1wa5c_ a.118.1.1 (C:) Exporti  71.8     4.5 0.00033   31.4   6.6   54   47-105   470-524 (959)
 37 d2bnxa1 a.118.1.23 (A:133-475)  68.1      17  0.0012   25.7   8.6   88   14-104    23-125 (343)
 38 d1lrva_ a.118.1.5 (A:) Leucine  67.9     2.4 0.00017   29.0   3.6   65   37-101    68-138 (233)
 39 d1ujka_ a.118.9.2 (A:) ADP-rib  60.4      12 0.00089   23.2   5.9   85   19-103    26-120 (145)
 40 d1lrva_ a.118.1.5 (A:) Leucine  56.6     6.7 0.00049   26.5   4.3   64   38-101   117-186 (233)
 41 d1mhqa_ a.118.9.2 (A:) ADP-rib  55.8      19  0.0014   22.2   6.3   86   19-104    19-114 (143)
 42 d1lsha1 a.118.4.1 (A:285-620)   55.5      21  0.0016   25.0   7.1   89   12-105   141-238 (336)
 43 d1t06a_ a.118.1.17 (A:) Hypoth  53.0      13 0.00096   24.9   5.4   65    9-74    119-190 (235)
 44 d1lsha1 a.118.4.1 (A:285-620)   52.8      10 0.00076   26.8   5.0   29   36-64    204-240 (336)
 45 d1dvpa1 a.118.9.2 (A:1-145) Hr  45.9     9.3 0.00068   23.7   3.4   69   35-104    42-113 (145)
 46 d1upka_ a.118.1.15 (A:) Mo25 p  45.8      46  0.0034   23.6   8.3   75   29-104   149-227 (330)
 47 d1juqa_ a.118.9.2 (A:) ADP-rib  35.3      45  0.0033   20.5   5.6   85   19-104    20-115 (151)
 48 d1wy6a1 a.118.20.1 (A:7-167) H  34.1      11  0.0008   23.9   2.2   73   29-101    10-96  (161)
 49 d1fs1b1 a.157.1.1 (B:86-140) C  29.7      16  0.0012   19.0   2.1   22   53-74     33-54  (55)
 50 d1uoua1 a.46.2.1 (A:33-100) Th  26.3      32  0.0023   18.1   3.1   37   37-73      4-42  (68)
 51 d1nexa1 a.157.1.1 (A:116-185)   23.4      34  0.0024   18.5   2.8   22   53-74     34-55  (70)
 52 d2euca1 a.249.1.1 (A:1-113) Hy  22.7      32  0.0023   20.2   2.7   17   11-27      5-21  (113)
 53 d1szaa_ a.118.9.4 (A:) PCF11 p  22.5      78  0.0057   19.0   6.1   65   36-101    44-109 (144)
 54 d1eara2 d.58.38.1 (A:75-142) U  21.7      20  0.0015   19.5   1.5   18    7-24      8-25  (68)
 55 d1utca1 a.118.1.4 (A:331-355)   21.2      16  0.0011   15.9   0.8   19   34-52      2-20  (26)

No 1  
>d1wa5b_ a.118.1.1 (B:) Karyopherin alpha {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]}
Probab=99.75  E-value=3.2e-18  Score=133.92  Aligned_cols=118  Identities=42%  Similarity=0.557  Sum_probs=102.9

Q ss_pred             hHHHHHHHHHHHhhH----hHHHHHhhccHHHHHHHhccCChHHH-HHHHHHHHhccCCC--HHHHHHHHhcCChHHHHh
Q 044025           12 LSKLKENTLDSNIVV----CMYTVIVANIILLLVHLLQHAELEIK-EATWAISSATYGGS--HEHIQFLVSQGYIKPLCD   84 (129)
Q Consensus        12 ~~~~r~~w~lsNI~~----qiq~vi~~g~lp~L~~ll~~~~~~v~-eA~wal~Ni~~~~~--~~~i~~lv~~g~i~~l~~   84 (129)
                      ......+|+++|+++    +++.+++.|++|.+++++.++++++| +|+|+++|++.+++  ++++.++++.|++++|++
T Consensus       345 ~i~~~~~~~l~nl~~~~~~~~~~i~~~~~l~~li~~l~~~~~~v~~~a~~~l~nl~~~~~~~~~~~~~l~~~~~l~~l~~  424 (503)
T d1wa5b_         345 NIKKEACWTISNITAGNTEQIQAVIDANLIPPLVKLLEVAEYKTKKEACWAISNASSGGLQRPDIIRYLVSQGCIKPLCD  424 (503)
T ss_dssp             HHHHHHHHHHHHHTTSCHHHHHHHHHTTCHHHHHHHHHHSCHHHHHHHHHHHHHHHHHTTTCTHHHHHHHHTTCHHHHHH
T ss_pred             HHHHHHHHHHHHHhhccHHHHHHHHHccccchhHHhcccCChhHHHHHHHHHHHHHhcccccHHHHHHHHHCCcHHHHHH
Confidence            334455699999998    77888999999999999999999999 99999999997654  467899999999999999


Q ss_pred             hcCCCCHHHHHHHHHHHhhccc---------CCCChHHHHHHHhccchhhhcCC
Q 044025           85 LLVCSDQRIVTVCLNGNRKLGM---------DNRVNVYTQMINECDGLDKIENL  129 (129)
Q Consensus        85 lL~~~d~~~~~~aL~al~ni~~---------~~~~~~~~~~i~e~ggl~~le~L  129 (129)
                      +|...|++++..+|++|.++.+         ....+++...++++||+++|+.|
T Consensus       425 ~L~~~d~~~~~~~L~~l~~ll~~~~~~~~~~~~~~~~~~~~iee~g~~~~i~~L  478 (503)
T d1wa5b_         425 LLEIADNRIIEVTLDALENILKMGEADKEARGLNINENADFIEKAGGMEKIFNC  478 (503)
T ss_dssp             HTTTCCHHHHHHHHHHHHHHHHHHHHHHHHHTCSSCHHHHHHHHTTHHHHHHGG
T ss_pred             HhcCCCHHHHHHHHHHHHHHHHHHHHHhhhhcccchHHHHHHHHCCCHHHHHHH
Confidence            9999999999999999998732         22457889999999999999865


No 2  
>d1q1sc_ a.118.1.1 (C:) Importin alpha {Mouse (Mus musculus) [TaxId: 10090]}
Probab=99.72  E-value=1.6e-17  Score=126.44  Aligned_cols=117  Identities=35%  Similarity=0.538  Sum_probs=103.8

Q ss_pred             HHHHHHHHHHHhhH----hHHHHHhhccHHHHHHHhccCChHHH-HHHHHHHHhccCCCHHHHHHHHhcCChHHHHhhcC
Q 044025           13 SKLKENTLDSNIVV----CMYTVIVANIILLLVHLLQHAELEIK-EATWAISSATYGGSHEHIQFLVSQGYIKPLCDLLV   87 (129)
Q Consensus        13 ~~~r~~w~lsNI~~----qiq~vi~~g~lp~L~~ll~~~~~~v~-eA~wal~Ni~~~~~~~~i~~lv~~g~i~~l~~lL~   87 (129)
                      .....+|+++|+++    ..+.+++.|++|.+++++.++++++| +|+|+++|++.+++++++.++++.|++++|+++|.
T Consensus       288 v~~~a~~~L~~l~~~~~~~~~~i~~~~~i~~li~~l~~~~~~v~~~a~~~l~nl~~~~~~~~~~~l~~~~~i~~L~~ll~  367 (434)
T d1q1sc_         288 IQKEATWTMSNITAGRQDQIQQVVNHGLVPFLVGVLSKADFKTQKEAAWAITNYTSGGTVEQIVYLVHCGIIEPLMNLLS  367 (434)
T ss_dssp             HHHHHHHHHHHHTTSCHHHHHHHHHTTCHHHHHHHHHSSCHHHHHHHHHHHHHHHHHSCHHHHHHHHHTTCHHHHHHHTT
T ss_pred             hhHHHHHHHhhhccccchhHHHHhhhhhHHHHHHHHhccChHHHHHHHHHHHHHHhcCCHHHHHHHHHCCcHHHHHHHhc
Confidence            33345589999998    56778899999999999999999999 99999999999888889999999999999999999


Q ss_pred             CCCHHHHHHHHHHHhhccc----CCCChHHHHHHHhccchhhhcCC
Q 044025           88 CSDQRIVTVCLNGNRKLGM----DNRVNVYTQMINECDGLDKIENL  129 (129)
Q Consensus        88 ~~d~~~~~~aL~al~ni~~----~~~~~~~~~~i~e~ggl~~le~L  129 (129)
                      ..|++++..+++++.++.+    .+.+++++..++++||++.|+.|
T Consensus       368 ~~d~~~~~~~l~~l~~ll~~~~~~~~~~~~~~~~~~~~~~~~i~~L  413 (434)
T d1q1sc_         368 AKDTKIIQVILDAISNIFQAAEKLGETEKLSIMIEECGGLDKIEAL  413 (434)
T ss_dssp             SSCHHHHHHHHHHHHHHHHHHHTTTCHHHHHHHHHHTTSHHHHHHH
T ss_pred             CCCHHHHHHHHHHHHHHHHHHHhcCCcHHHHHHHHHcCCHHHHHHH
Confidence            9999999999999998732    44577899999999999998754


No 3  
>d1q1sc_ a.118.1.1 (C:) Importin alpha {Mouse (Mus musculus) [TaxId: 10090]}
Probab=99.54  E-value=2.3e-14  Score=108.63  Aligned_cols=122  Identities=17%  Similarity=0.273  Sum_probs=102.8

Q ss_pred             ccccCCCCChHHHHHHHHHHHhhH-----hHHHHHhhccHHHHHHHhcc-CChHHH-HHHHHHHHhccCCCHHHHHHHHh
Q 044025            3 IQQKNPKLPLSKLKENTLDSNIVV-----CMYTVIVANIILLLVHLLQH-AELEIK-EATWAISSATYGGSHEHIQFLVS   75 (129)
Q Consensus         3 i~~~~~~~~~~~~r~~w~lsNI~~-----qiq~vi~~g~lp~L~~ll~~-~~~~v~-eA~wal~Ni~~~~~~~~i~~lv~   75 (129)
                      |..++.+++.....++.++.++..     .++.++++|++|.|+++|++ +++++| +|+|+|+|++.+ +++..+.+++
T Consensus        19 v~~l~s~~~~~~~~a~~~l~~l~s~~~~~~~~~i~~~g~i~~Lv~lL~~~~~~~v~~~a~~~L~~la~~-~~~~~~~i~~   97 (434)
T d1q1sc_          19 VKGINSNNLESQLQATQAARKLLSREKQPPIDNIIRAGLIPKFVSFLGKTDCSPIQFESAWALTNIASG-TSEQTKAVVD   97 (434)
T ss_dssp             HHHHTSSCHHHHHHHHHHHHHHHHSSSCCCHHHHHHTTCHHHHHHHTTCGGGHHHHHHHHHHHHHHHTS-CHHHHHHHHH
T ss_pred             HHHHcCCCHHHHHHHHHHHHHHhcCCCCchHHHHHHCCCHHHHHHHHccCCCHHHHHHHHHHHHHHhcC-ChhhhhHhhh
Confidence            344556666777777788888865     47889999999999999975 467899 999999999987 5577888999


Q ss_pred             cCChHHHHhhcCCCCHHHHHHHHHHHhhcccCCCChHHHHHHHhccchhhhc
Q 044025           76 QGYIKPLCDLLVCSDQRIVTVCLNGNRKLGMDNRVNVYTQMINECDGLDKIE  127 (129)
Q Consensus        76 ~g~i~~l~~lL~~~d~~~~~~aL~al~ni~~~~~~~~~~~~i~e~ggl~~le  127 (129)
                      .|++|+|+.+|.++++++...++++++|+..  ..+.+...+.+.|+++.+.
T Consensus        98 ~~~i~~l~~~L~~~~~~~~~~a~~~L~nl~~--~~~~~~~~i~~~~~~~~l~  147 (434)
T d1q1sc_          98 GGAIPAFISLLASPHAHISEQAVWALGNIAG--DGSAFRDLVIKHGAIDPLL  147 (434)
T ss_dssp             TTHHHHHHHHTTCSCHHHHHHHHHHHHHHHT--TCHHHHHHHHHTTCHHHHH
T ss_pred             ccchhhhhhccccCCHHHHHHHHHHHHHHhc--cchHHHHHHHHhhhhhHHH
Confidence            9999999999999999999999999999953  4667788899999987663


No 4  
>d1wa5b_ a.118.1.1 (B:) Karyopherin alpha {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]}
Probab=99.45  E-value=2e-13  Score=106.32  Aligned_cols=117  Identities=15%  Similarity=0.254  Sum_probs=97.5

Q ss_pred             CCChHHHHHHHHHHHhhH-----hHHHHHhhccHHHHHHHhccC-ChHHH-HHHHHHHHhccCCCHHHHHHHHhcCChHH
Q 044025            9 KLPLSKLKENTLDSNIVV-----CMYTVIVANIILLLVHLLQHA-ELEIK-EATWAISSATYGGSHEHIQFLVSQGYIKP   81 (129)
Q Consensus         9 ~~~~~~~r~~w~lsNI~~-----qiq~vi~~g~lp~L~~ll~~~-~~~v~-eA~wal~Ni~~~~~~~~i~~lv~~g~i~~   81 (129)
                      ++....+.++..+.++..     .++.++++|++|.|++++++. +.++| +|+|+++|++.+ ++++...+++.|++|.
T Consensus        88 ~~~~~~~~a~~~~r~~ls~~~~~~i~~ii~~g~i~~Lv~~l~~~~~~~iq~~a~~~L~ni~~~-~~~~~~~~~~~g~i~~  166 (503)
T d1wa5b_          88 DDMQEQLSATVKFRQILSREHRPPIDVVIQAGVVPRLVEFMRENQPEMLQLEAAWALTNIASG-TSAQTKVVVDADAVPL  166 (503)
T ss_dssp             SSHHHHHHHHHHHHHHTCCSSSCSHHHHHHTTCHHHHHHTTSTTSCHHHHHHHHHHHHHHTTS-CHHHHHHHHHTTCHHH
T ss_pred             CCHHHHHHHHHHHHHHHhcCCCchHHHHHHCCChHHHHHHHcCCCCHHHHHHHHHHHHHHHcC-CHHHHHHHHhCCChHH
Confidence            333444455556666543     588999999999999999864 77899 999999999987 5678888899999999


Q ss_pred             HHhhcCCCCHHHHHHHHHHHhhcccCCCChHHHHHHHhccchhhhcC
Q 044025           82 LCDLLVCSDQRIVTVCLNGNRKLGMDNRVNVYTQMINECDGLDKIEN  128 (129)
Q Consensus        82 l~~lL~~~d~~~~~~aL~al~ni~~~~~~~~~~~~i~e~ggl~~le~  128 (129)
                      ++.+|.+++.++...++++++|++.  ....+++.+.++|+++.+..
T Consensus       167 l~~lL~s~~~~i~~~a~~~L~nia~--~~~~~r~~l~~~~~~~~L~~  211 (503)
T d1wa5b_         167 FIQLLYTGSVEVKEQAIWALGNVAG--DSTDYRDYVLQCNAMEPILG  211 (503)
T ss_dssp             HHHHHHHCCHHHHHHHHHHHHHHHT--TCHHHHHHHHHTTCHHHHHH
T ss_pred             HHHHhcCCChhHHHHHHHHHHHHhh--hhHHHHHHHHhhcccccchh
Confidence            9999999999999999999999963  56788899999999988753


No 5  
>d1xqra1 a.118.1.21 (A:87-350) Hsp70-binding protein 1 (HspBP1) {Human (Homo sapiens) [TaxId: 9606]}
Probab=99.35  E-value=1.1e-12  Score=95.38  Aligned_cols=102  Identities=15%  Similarity=0.102  Sum_probs=86.1

Q ss_pred             cccCCCCChHHHH-HHHHHHHhhH----hHHHHHhhccHHHHHHHhccCChHHH-HHHHHHHHhccCCCHHHHHHHHhcC
Q 044025            4 QQKNPKLPLSKLK-ENTLDSNIVV----CMYTVIVANIILLLVHLLQHAELEIK-EATWAISSATYGGSHEHIQFLVSQG   77 (129)
Q Consensus         4 ~~~~~~~~~~~~r-~~w~lsNI~~----qiq~vi~~g~lp~L~~ll~~~~~~v~-eA~wal~Ni~~~~~~~~i~~lv~~g   77 (129)
                      ..+.++.+....+ .+|+++|+++    ..+.+...|.+|.|++++++++.+++ .++|+|.|++.+ +++....+++.|
T Consensus       108 ~lL~~~~~~~v~~~a~~aL~~l~~~~~~~~~~~~~~~gi~~L~~lL~~~~~~~~~~a~~~L~~l~~~-~~~~~~~~~~~~  186 (264)
T d1xqra1         108 RLLDRDACDTVRVKALFAISCLVREQEAGLLQFLRLDGFSVLMRAMQQQVQKLKVKSAFLLQNLLVG-HPEHKGTLCSMG  186 (264)
T ss_dssp             HHHHHCSCHHHHHHHHHHHHHHHTTCHHHHHHHHHTTHHHHHHHHHHSSCHHHHHHHHHHHHHHHHH-CGGGHHHHHHTT
T ss_pred             HHhhcCCCHHHHHHHHHHHHHHhccchhhHHHHHHhhhhhHHHHHHhcCchHHHHHHHHHHHHHHhc-cHHHHHHHHHhh
Confidence            3344444454444 4589999998    35566789999999999999999999 999999999987 557778889999


Q ss_pred             ChHHHHhhcCCCCHHHHHHHHHHHhhccc
Q 044025           78 YIKPLCDLLVCSDQRIVTVCLNGNRKLGM  106 (129)
Q Consensus        78 ~i~~l~~lL~~~d~~~~~~aL~al~ni~~  106 (129)
                      ++|.|+.+|.++|+.++..++++|.++..
T Consensus       187 ~v~~L~~lL~~~~~~~~~~a~~aL~~L~~  215 (264)
T d1xqra1         187 MVQQLVALVRTEHSPFHEHVLGALCSLVT  215 (264)
T ss_dssp             HHHHHHHHHTSCCSTHHHHHHHHHHHHHT
T ss_pred             hHHHHHHHHcCCCHHHHHHHHHHHHHHHh
Confidence            99999999999999999999999999853


No 6  
>d1xqra1 a.118.1.21 (A:87-350) Hsp70-binding protein 1 (HspBP1) {Human (Homo sapiens) [TaxId: 9606]}
Probab=99.34  E-value=2.9e-12  Score=93.14  Aligned_cols=120  Identities=11%  Similarity=0.008  Sum_probs=96.4

Q ss_pred             ccCCCCChHHHHHHHHHHHhhH---hHH-HHHhhccHHHHHHHhcc-CChHHH-HHHHHHHHhccCCCHHHHHHHHhcCC
Q 044025            5 QKNPKLPLSKLKENTLDSNIVV---CMY-TVIVANIILLLVHLLQH-AELEIK-EATWAISSATYGGSHEHIQFLVSQGY   78 (129)
Q Consensus         5 ~~~~~~~~~~~r~~w~lsNI~~---qiq-~vi~~g~lp~L~~ll~~-~~~~v~-eA~wal~Ni~~~~~~~~i~~lv~~g~   78 (129)
                      .++.+.+....+++|+++|++.   ..| .+.+.|++|.|+.++.+ .++.+| .|+|+++|++.+ ++.....+.+.|.
T Consensus        67 ll~s~~~~vr~~A~~~L~~l~~~~~~~~~~~~~~~~i~~Lv~lL~~~~~~~v~~~a~~aL~~l~~~-~~~~~~~~~~~~g  145 (264)
T d1xqra1          67 YLEAGAAGLRWRAAQLIGTCSQNVAAIQEQVLGLGALRKLLRLLDRDACDTVRVKALFAISCLVRE-QEAGLLQFLRLDG  145 (264)
T ss_dssp             TTTCSSHHHHHHHHHHHHHHHTTCHHHHHHHHHTTHHHHHHHHHHHCSCHHHHHHHHHHHHHHHTT-CHHHHHHHHHTTH
T ss_pred             HhCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHcCchHHHHHHhhcCCCHHHHHHHHHHHHHHhcc-chhhHHHHHHhhh
Confidence            3444444455566789999998   344 45689999999999975 578999 999999999987 4455667789999


Q ss_pred             hHHHHhhcCCCCHHHHHHHHHHHhhcccCCCChHHHHHHHhccchhhhc
Q 044025           79 IKPLCDLLVCSDQRIVTVCLNGNRKLGMDNRVNVYTQMINECDGLDKIE  127 (129)
Q Consensus        79 i~~l~~lL~~~d~~~~~~aL~al~ni~~~~~~~~~~~~i~e~ggl~~le  127 (129)
                      ++.+..+|.+.++++...+++++.++..  +.+.....+.+.|+++.+.
T Consensus       146 i~~L~~lL~~~~~~~~~~a~~~L~~l~~--~~~~~~~~~~~~~~v~~L~  192 (264)
T d1xqra1         146 FSVLMRAMQQQVQKLKVKSAFLLQNLLV--GHPEHKGTLCSMGMVQQLV  192 (264)
T ss_dssp             HHHHHHHHHSSCHHHHHHHHHHHHHHHH--HCGGGHHHHHHTTHHHHHH
T ss_pred             hhHHHHHHhcCchHHHHHHHHHHHHHHh--ccHHHHHHHHHhhhHHHHH
Confidence            9999999999999999999999999853  3455567788889888764


No 7  
>d1jdha_ a.118.1.1 (A:) beta-Catenin {Human (Homo sapiens) [TaxId: 9606]}
Probab=99.34  E-value=1.4e-12  Score=101.92  Aligned_cols=119  Identities=10%  Similarity=0.036  Sum_probs=97.6

Q ss_pred             cCCCCChHHHHH-HHHHHHhhH---hHHHHHhhccHHHHHHHhccCChHHH-HHHHHHHHhccCCCHHHHHHHHhcCChH
Q 044025            6 KNPKLPLSKLKE-NTLDSNIVV---CMYTVIVANIILLLVHLLQHAELEIK-EATWAISSATYGGSHEHIQFLVSQGYIK   80 (129)
Q Consensus         6 ~~~~~~~~~~r~-~w~lsNI~~---qiq~vi~~g~lp~L~~ll~~~~~~v~-eA~wal~Ni~~~~~~~~i~~lv~~g~i~   80 (129)
                      +.+.......+. ++++.+++.   ..+.+++.|.+|.|+.+|++++++++ .|+|+|+|++.+.. ...+.+.+.|++|
T Consensus        68 L~~~~~~~~~~~a~~~L~~l~~~~~~~~~i~~~g~i~~Li~lL~~~~~~v~~~a~~aL~~l~~~~~-~~~~~~~~~g~i~  146 (529)
T d1jdha_          68 MQNTNDVETARCTAGTLHNLSHHREGLLAIFKSGGIPALVKMLGSPVDSVLFYAITTLHNLLLHQE-GAKMAVRLAGGLQ  146 (529)
T ss_dssp             HHHCCCHHHHHHHHHHHHHHTTSHHHHHHHHHTTHHHHHHHHTTCSCHHHHHHHHHHHHHHHHHCT-THHHHHHHHTHHH
T ss_pred             HcCCCCHHHHHHHHHHHHHHhCCchhHHHHHHCCCHHHHHHHhCCCCHHHHHHHHHHHHHhhcccc-hhhhHHHhcCCch
Confidence            333333444444 479999998   45678899999999999999999999 99999999998733 4445667899999


Q ss_pred             HHHhhcCCCCHHHHHHHHHHHhhcccCCCChHHHHHHHhccchhhhc
Q 044025           81 PLCDLLVCSDQRIVTVCLNGNRKLGMDNRVNVYTQMINECDGLDKIE  127 (129)
Q Consensus        81 ~l~~lL~~~d~~~~~~aL~al~ni~~~~~~~~~~~~i~e~ggl~~le  127 (129)
                      +|+.+|.++++.+...+.+++.++..  .+++....+.+.|+++.+.
T Consensus       147 ~Lv~lL~~~~~~~~~~a~~~L~~l~~--~~~~~~~~~~~~~~~~~L~  191 (529)
T d1jdha_         147 KMVALLNKTNVKFLAITTDCLQILAY--GNQESKLIILASGGPQALV  191 (529)
T ss_dssp             HHHHGGGCCCHHHHHHHHHHHHHHHT--TCHHHHHHHHHTTHHHHHH
T ss_pred             HHHHHHHccChHHHHHHHHHHHHHhh--hhhHHHHHHHhcccchHHH
Confidence            99999999999999999999999853  4677788889999887764


No 8  
>d1xm9a1 a.118.1.24 (A:244-700) Plakophilin 1 {Human (Homo sapiens) [TaxId: 9606]}
Probab=99.32  E-value=3e-12  Score=94.84  Aligned_cols=90  Identities=18%  Similarity=0.181  Sum_probs=79.7

Q ss_pred             ccHHHHHHHhccCChHHH-HHHHHHHHhccCCCHHHHHHHHhcCChHHHHhhcCCCCHHHHHHHHHHHhhcccCCCChHH
Q 044025           35 NIILLLVHLLQHAELEIK-EATWAISSATYGGSHEHIQFLVSQGYIKPLCDLLVCSDQRIVTVCLNGNRKLGMDNRVNVY  113 (129)
Q Consensus        35 g~lp~L~~ll~~~~~~v~-eA~wal~Ni~~~~~~~~i~~lv~~g~i~~l~~lL~~~d~~~~~~aL~al~ni~~~~~~~~~  113 (129)
                      +.+|.|+++|+++++++| .|+++|+|++.+ +++.-+.+.+.|+||+|+++|.+++++++..++++|+|+..  +..+.
T Consensus         2 ~~ip~lv~~L~~~~~~~~~~a~~~l~~l~~~-~~~~~~~i~~~g~i~~Lv~lL~~~~~~v~~~a~~aL~~L~~--~~~~~   78 (457)
T d1xm9a1           2 LTIPKAVQYLSSQDEKYQAIGAYYIQHTCFQ-DESAKQQVYQLGGICKLVDLLRSPNQNVQQAAAGALRNLVF--RSTTN   78 (457)
T ss_dssp             CCHHHHHHHHHSSCTHHHHHHHHHHHHHTSS-CSSHHHHHHHTTHHHHHHHHTTSSCHHHHHHHHHHHHHHHS--SCHHH
T ss_pred             CCHHHHHHHhCCCCHHHHHHHHHHHHHHHcC-CHHHHHHHHHCCcHHHHHHHHCCCCHHHHHHHHHHHHHHHc--CCHHH
Confidence            468999999999999999 999999999987 44666788899999999999999999999999999999953  46667


Q ss_pred             HHHHHhccchhhhc
Q 044025          114 TQMINECDGLDKIE  127 (129)
Q Consensus       114 ~~~i~e~ggl~~le  127 (129)
                      ...+.+.||++.+-
T Consensus        79 ~~~i~~~g~v~~li   92 (457)
T d1xm9a1          79 KLETRRQNGIREAV   92 (457)
T ss_dssp             HHHHHHTTCHHHHH
T ss_pred             HHHHHHCCChHHHH
Confidence            78899999998764


No 9  
>d1xm9a1 a.118.1.24 (A:244-700) Plakophilin 1 {Human (Homo sapiens) [TaxId: 9606]}
Probab=99.32  E-value=4.5e-12  Score=93.86  Aligned_cols=103  Identities=16%  Similarity=0.031  Sum_probs=87.8

Q ss_pred             ccccCCCCChHHHHHHHHHHHhhH----hHHHHHhhccHHHHHHHhccCChHHH-HHHHHHHHhccCCCHHHHHHHHhcC
Q 044025            3 IQQKNPKLPLSKLKENTLDSNIVV----CMYTVIVANIILLLVHLLQHAELEIK-EATWAISSATYGGSHEHIQFLVSQG   77 (129)
Q Consensus         3 i~~~~~~~~~~~~r~~w~lsNI~~----qiq~vi~~g~lp~L~~ll~~~~~~v~-eA~wal~Ni~~~~~~~~i~~lv~~g   77 (129)
                      |..|+.+++.....++++|.|+|.    .-+.+.+.|.+|.|+++|+++++++| .|+|+|.|++.+ +++....+.+.|
T Consensus         8 v~~L~~~~~~~~~~a~~~l~~l~~~~~~~~~~i~~~g~i~~Lv~lL~~~~~~v~~~a~~aL~~L~~~-~~~~~~~i~~~g   86 (457)
T d1xm9a1           8 VQYLSSQDEKYQAIGAYYIQHTCFQDESAKQQVYQLGGICKLVDLLRSPNQNVQQAAAGALRNLVFR-STTNKLETRRQN   86 (457)
T ss_dssp             HHHHHSSCTHHHHHHHHHHHHHTSSCSSHHHHHHHTTHHHHHHHHTTSSCHHHHHHHHHHHHHHHSS-CHHHHHHHHHTT
T ss_pred             HHHhCCCCHHHHHHHHHHHHHHHcCCHHHHHHHHHCCcHHHHHHHHCCCCHHHHHHHHHHHHHHHcC-CHHHHHHHHHCC
Confidence            445666777788888899999997    46667799999999999999999999 999999999976 445556778999


Q ss_pred             ChHHHHhhcCC-CCHHHHHHHHHHHhhccc
Q 044025           78 YIKPLCDLLVC-SDQRIVTVCLNGNRKLGM  106 (129)
Q Consensus        78 ~i~~l~~lL~~-~d~~~~~~aL~al~ni~~  106 (129)
                      .++.++.++.. .++.+...+++++.++..
T Consensus        87 ~v~~li~~l~~~~~~~~~~~a~~~l~~l~~  116 (457)
T d1xm9a1          87 GIREAVSLLRRTGNAEIQKQLTGLLWNLSS  116 (457)
T ss_dssp             CHHHHHHHHTTCCCHHHHHHHHHHHHHHHT
T ss_pred             ChHHHHHHHhccCcHHHHHHHHHHHHHHHh
Confidence            99999998864 778899999999999864


No 10 
>d1jdha_ a.118.1.1 (A:) beta-Catenin {Human (Homo sapiens) [TaxId: 9606]}
Probab=99.15  E-value=1.4e-10  Score=90.28  Aligned_cols=122  Identities=14%  Similarity=0.181  Sum_probs=96.4

Q ss_pred             ccccCCCCChHHHHHHHHHHHhhH----hHHHHHhhccHHHHHHHhccCChHHH-HHHHHHHHhccCCCHHHHHHHHhcC
Q 044025            3 IQQKNPKLPLSKLKENTLDSNIVV----CMYTVIVANIILLLVHLLQHAELEIK-EATWAISSATYGGSHEHIQFLVSQG   77 (129)
Q Consensus         3 i~~~~~~~~~~~~r~~w~lsNI~~----qiq~vi~~g~lp~L~~ll~~~~~~v~-eA~wal~Ni~~~~~~~~i~~lv~~g   77 (129)
                      +..++..++......+|+|.|++.    ..+.+.+.|.+|.|+.+|++++.+++ .++|++.+++.+ +.+....+++.|
T Consensus       107 i~lL~~~~~~v~~~a~~aL~~l~~~~~~~~~~~~~~g~i~~Lv~lL~~~~~~~~~~a~~~L~~l~~~-~~~~~~~~~~~~  185 (529)
T d1jdha_         107 VKMLGSPVDSVLFYAITTLHNLLLHQEGAKMAVRLAGGLQKMVALLNKTNVKFLAITTDCLQILAYG-NQESKLIILASG  185 (529)
T ss_dssp             HHHTTCSCHHHHHHHHHHHHHHHHHCTTHHHHHHHHTHHHHHHHGGGCCCHHHHHHHHHHHHHHHTT-CHHHHHHHHHTT
T ss_pred             HHHhCCCCHHHHHHHHHHHHHhhcccchhhhHHHhcCCchHHHHHHHccChHHHHHHHHHHHHHhhh-hhHHHHHHHhcc
Confidence            344555555555556689999998    34556689999999999999999999 999999999987 445566778999


Q ss_pred             ChHHHHhhcCC-CCHHHHHHHHHHHhhcccCCCChHHHHHHHhccchhhhcC
Q 044025           78 YIKPLCDLLVC-SDQRIVTVCLNGNRKLGMDNRVNVYTQMINECDGLDKIEN  128 (129)
Q Consensus        78 ~i~~l~~lL~~-~d~~~~~~aL~al~ni~~~~~~~~~~~~i~e~ggl~~le~  128 (129)
                      .++++..+|.+ ++..++..+.+++.++..   .++....+.+.|+++.+..
T Consensus       186 ~~~~L~~ll~~~~~~~~~~~~~~~l~~ls~---~~~~~~~~~~~g~~~~L~~  234 (529)
T d1jdha_         186 GPQALVNIMRTYTYEKLLWTTSRVLKVLSV---CSSNKPAIVEAGGMQALGL  234 (529)
T ss_dssp             HHHHHHHHHHHCCCHHHHHHHHHHHHHHTT---STTHHHHHHHTTHHHHHHT
T ss_pred             cchHHHHHHHhhhhHHHHHHHHHHHhhhhc---cccccchhhhhhhhhhHHH
Confidence            99999999965 557888889999999863   3444567888899887654


No 11 
>d1te4a_ a.118.1.16 (A:) MTH187 {Archaeon Methanobacterium thermoautotrophicum [TaxId: 145262]}
Probab=98.05  E-value=3.8e-06  Score=52.62  Aligned_cols=71  Identities=11%  Similarity=0.014  Sum_probs=47.0

Q ss_pred             HHHHHHHHHHHhhHhHHHHHhhccHHHHHHHhccCChHHH-HHHHHHHHhccCCCHHHHHHHHhcCChHHHHhhcCCCCH
Q 044025           13 SKLKENTLDSNIVVCMYTVIVANIILLLVHLLQHAELEIK-EATWAISSATYGGSHEHIQFLVSQGYIKPLCDLLVCSDQ   91 (129)
Q Consensus        13 ~~~r~~w~lsNI~~qiq~vi~~g~lp~L~~ll~~~~~~v~-eA~wal~Ni~~~~~~~~i~~lv~~g~i~~l~~lL~~~d~   91 (129)
                      .....+|+++++..       .+.+|.|..+|++.++.+| +|+|+|+.+.   +++         +++.+..++..+++
T Consensus        38 vR~~a~~~L~~~~~-------~~~~~~L~~~l~d~~~~VR~~a~~aL~~i~---~~~---------~~~~L~~ll~d~~~   98 (111)
T d1te4a_          38 IRGAAAWIIGNFQD-------ERAVEPLIKLLEDDSGFVRSGAARSLEQIG---GER---------VRAAMEKLAETGTG   98 (111)
T ss_dssp             HHHHHHHHHGGGCS-------HHHHHHHHHHHHHCCTHHHHHHHHHHHHHC---SHH---------HHHHHHHHTTSCCT
T ss_pred             HHHHHHHHHHhcch-------hhhHHHHHhhhccchhHHHHHHHHHHHHhC---ccc---------hHHHHHHHHcCCCH
Confidence            33334467776542       2356777788888888888 8888887763   211         45666677777778


Q ss_pred             HHHHHHHHHHh
Q 044025           92 RIVTVCLNGNR  102 (129)
Q Consensus        92 ~~~~~aL~al~  102 (129)
                      .++..++.+|.
T Consensus        99 ~vr~~A~~aL~  109 (111)
T d1te4a_          99 FARKVAVNYLE  109 (111)
T ss_dssp             HHHHHHHHHGG
T ss_pred             HHHHHHHHHHH
Confidence            88777777765


No 12 
>d1te4a_ a.118.1.16 (A:) MTH187 {Archaeon Methanobacterium thermoautotrophicum [TaxId: 145262]}
Probab=97.88  E-value=1.1e-05  Score=50.39  Aligned_cols=60  Identities=18%  Similarity=0.277  Sum_probs=51.0

Q ss_pred             hccHHHHHHHhccCChHHH-HHHHHHHHhccCCCHHHHHHHHhcCChHHHHhhcCCCCHHHHHHHHHHHhhcc
Q 044025           34 ANIILLLVHLLQHAELEIK-EATWAISSATYGGSHEHIQFLVSQGYIKPLCDLLVCSDQRIVTVCLNGNRKLG  105 (129)
Q Consensus        34 ~g~lp~L~~ll~~~~~~v~-eA~wal~Ni~~~~~~~~i~~lv~~g~i~~l~~lL~~~d~~~~~~aL~al~ni~  105 (129)
                      ...++.|+..|.++++.+| .|+|+++++...            +++|.|..+|.++|+.++..++++|+.+.
T Consensus        21 ~~~~~~L~~~l~d~~~~vR~~a~~~L~~~~~~------------~~~~~L~~~l~d~~~~VR~~a~~aL~~i~   81 (111)
T d1te4a_          21 DEAFEPLLESLSNEDWRIRGAAAWIIGNFQDE------------RAVEPLIKLLEDDSGFVRSGAARSLEQIG   81 (111)
T ss_dssp             STTHHHHHHGGGCSCHHHHHHHHHHHGGGCSH------------HHHHHHHHHHHHCCTHHHHHHHHHHHHHC
T ss_pred             HHHHHHHHHHHcCCCHHHHHHHHHHHHhcchh------------hhHHHHHhhhccchhHHHHHHHHHHHHhC
Confidence            3467889999999999999 999999887532            24678889999999999999999999883


No 13 
>d1qbkb_ a.118.1.1 (B:) Karyopherin beta2 {Human (Homo sapiens) [TaxId: 9606]}
Probab=97.02  E-value=0.00041  Score=56.29  Aligned_cols=99  Identities=11%  Similarity=0.030  Sum_probs=66.3

Q ss_pred             cccCCCCChHHHHHHHHHHHhhH----hHHHHHhhccHHHHHHHhccCChHHH-HHHHHHHHhccCCCHHHHHHHHhcCC
Q 044025            4 QQKNPKLPLSKLKENTLDSNIVV----CMYTVIVANIILLLVHLLQHAELEIK-EATWAISSATYGGSHEHIQFLVSQGY   78 (129)
Q Consensus         4 ~~~~~~~~~~~~r~~w~lsNI~~----qiq~vi~~g~lp~L~~ll~~~~~~v~-eA~wal~Ni~~~~~~~~i~~lv~~g~   78 (129)
                      ..++...+.....++|+++.++.    +...-.-..+++.+...+.+.++++| .||||+.+++....++...|+  ..+
T Consensus       443 ~~l~d~~~~Vr~~a~~~l~~~~~~~~~~~~~~~~~~~l~~ll~~l~d~~~~V~~~a~~al~~l~~~~~~~l~p~~--~~i  520 (888)
T d1qbkb_         443 QCLSDKKALVRSITCWTLSRYAHWVVSQPPDTYLKPLMTELLKRILDSNKRVQEAACSAFATLEEEACTELVPYL--AYI  520 (888)
T ss_dssp             HHTTSSCHHHHHHHHHHHHHTHHHHHSSCHHHHTTTHHHHHHHHHSSSCHHHHHHHHHHHHHHHHHHTTSSGGGH--HHH
T ss_pred             HhccCCCHHHHHHHHHHHHHHHHHhhhhhhhhhhhhhHHHHHHHhcCCCHHHHHHHHHHHHHHHHHhhhhhhhHH--HHH
Confidence            34444455555567799999987    22222236789999999999999999 999999999864332222222  135


Q ss_pred             hHHHHhhcCCCCHHHHHHHHHHHhhc
Q 044025           79 IKPLCDLLVCSDQRIVTVCLNGNRKL  104 (129)
Q Consensus        79 i~~l~~lL~~~d~~~~~~aL~al~ni  104 (129)
                      ++.+...+...+.+....++++++.+
T Consensus       521 l~~l~~~l~~~~~~~~~~~~~al~~l  546 (888)
T d1qbkb_         521 LDTLVFAFSKYQHKNLLILYDAIGTL  546 (888)
T ss_dssp             HHHHHHHTTTCCHHHHHHHHHHHHHH
T ss_pred             HHHHHHHHhhhhHHHHHHHHHHHHHH
Confidence            56777777766666666677777654


No 14 
>d2vglb_ a.118.1.10 (B:) Adaptin beta subunit N-terminal fragment {Human (Homo sapiens) [TaxId: 9606]}
Probab=96.92  E-value=0.0008  Score=52.85  Aligned_cols=81  Identities=15%  Similarity=0.165  Sum_probs=63.3

Q ss_pred             HHHHHhhHhHHHHHhhccHHHHHHHhccCChHHH-HHHHHHHHhccCCCHHHHHHHHhcCChHHHHhhcCCCCHHHHHHH
Q 044025           19 TLDSNIVVCMYTVIVANIILLLVHLLQHAELEIK-EATWAISSATYGGSHEHIQFLVSQGYIKPLCDLLVCSDQRIVTVC   97 (129)
Q Consensus        19 w~lsNI~~qiq~vi~~g~lp~L~~ll~~~~~~v~-eA~wal~Ni~~~~~~~~i~~lv~~g~i~~l~~lL~~~d~~~~~~a   97 (129)
                      -++++|..  ..++ ..++|.+.+++.+.++.|| .|++++..+... +++.   +...+.++.+.++|..+|+.++..+
T Consensus       105 r~L~~i~~--~~i~-~~l~~~l~~~L~D~~p~VRk~Aa~~l~kl~~~-~p~~---~~~~~~~~~L~~lL~D~n~~V~~~A  177 (579)
T d2vglb_         105 RTMGCIRV--DKIT-EYLCEPLRKCLKDEDPYVRKTAAVCVAKLHDI-NAQM---VEDQGFLDSLRDLIADSNPMVVANA  177 (579)
T ss_dssp             HHHHTCCS--GGGH-HHHHHHHHHHSSCSCHHHHHHHHHHHHHHHHS-SCCC---HHHHHHHHHHHHTTSCSCHHHHHHH
T ss_pred             HHHHcCCC--HHHH-HHHHHHHHHHHhcCcHHHHHHHHHHHHHHhcc-Chhh---hhhhhHHHHHHHHHcCCChHHHHHH
Confidence            37777754  2222 2368899999999999999 999999999875 3332   2245788999999999999999999


Q ss_pred             HHHHhhccc
Q 044025           98 LNGNRKLGM  106 (129)
Q Consensus        98 L~al~ni~~  106 (129)
                      +.++..+.+
T Consensus       178 l~~L~~I~~  186 (579)
T d2vglb_         178 VAALSEISE  186 (579)
T ss_dssp             HHHHHHHTT
T ss_pred             HHHHHHHHH
Confidence            999988743


No 15 
>d1ibrb_ a.118.1.1 (B:) Importin beta {Human (Homo sapiens) [TaxId: 9606]}
Probab=96.68  E-value=0.0009  Score=48.69  Aligned_cols=71  Identities=10%  Similarity=0.136  Sum_probs=56.7

Q ss_pred             hccHHHHHHHhccCChHHH-HHHHHHHHhccCCCHHHHHHHHhcCChHHHHhhcCCCCHHHHHHHHHHHhhcc
Q 044025           34 ANIILLLVHLLQHAELEIK-EATWAISSATYGGSHEHIQFLVSQGYIKPLCDLLVCSDQRIVTVCLNGNRKLG  105 (129)
Q Consensus        34 ~g~lp~L~~ll~~~~~~v~-eA~wal~Ni~~~~~~~~i~~lv~~g~i~~l~~lL~~~d~~~~~~aL~al~ni~  105 (129)
                      ..++|.+.+.+++++.++| .|+.+++.++.+...+.+...+ ..++|.+...++++++.++..|+++++++.
T Consensus       364 ~~l~~~i~~~l~s~~~~~r~aal~~l~~i~~~~~~~~~~~~l-~~i~~~l~~~l~d~~~~VR~~a~~~l~~i~  435 (458)
T d1ibrb_         364 PHVLPFIKEHIKNPDWRYRDAAVMAFGCILEGPEPSQLKPLV-IQAMPTLIELMKDPSVVVRDTAAWTVGRIC  435 (458)
T ss_dssp             HHHHHHHHHHTTCSSHHHHHHHHHHHHHTSSSSCTTTTCTTT-TTHHHHHHHGGGCSCHHHHHHHHHHHHHHH
T ss_pred             hHHHHHHHHHhcCCCHHHHHHHHHHHHHHHHhcCHhHHHHHH-HHHHHHHHHHhCCCCHHHHHHHHHHHHHHH
Confidence            3477888888999999999 9999999999764323322212 357899999999999999999999999874


No 16 
>d1b3ua_ a.118.1.2 (A:) Constant regulatory domain of protein phosphatase 2a, pr65alpha {Human (Homo sapiens) [TaxId: 9606]}
Probab=96.63  E-value=0.015  Score=44.28  Aligned_cols=68  Identities=6%  Similarity=-0.001  Sum_probs=43.5

Q ss_pred             hhccHHHHHHHhccCChHHH-HHHHHHHHhccCCCHHHHHHHHhcCChHHHHhhcCCCCHHHHHHHHHHHhhc
Q 044025           33 VANIILLLVHLLQHAELEIK-EATWAISSATYGGSHEHIQFLVSQGYIKPLCDLLVCSDQRIVTVCLNGNRKL  104 (129)
Q Consensus        33 ~~g~lp~L~~ll~~~~~~v~-eA~wal~Ni~~~~~~~~i~~lv~~g~i~~l~~lL~~~d~~~~~~aL~al~ni  104 (129)
                      ...++|.+.++++++.+.|| .|++++.++...-+++..    +..+.|.+-.+++.+|.++...|.+|+..+
T Consensus       517 ~~~ilp~ll~~~~D~v~nVR~~a~~~l~~i~~~~~~~~~----~~~i~~~l~~L~~D~d~dVr~~A~~al~~l  585 (588)
T d1b3ua_         517 TKHMLPTVLRMAGDPVANVRFNVAKSLQKIGPILDNSTL----QSEVKPILEKLTQDQDVDVKYFAQEALTVL  585 (588)
T ss_dssp             HHHTHHHHHHGGGCSCHHHHHHHHHHHHHHGGGSCHHHH----HHHHHHHHHHHTTCSSHHHHHHHHHHHHHT
T ss_pred             HHHHHHHHHHHcCCCCHHHHHHHHHHHHHHHHHcCcHhH----HHHHHHHHHHHcCCCCHHHHHHHHHHHHHH
Confidence            35577777777777777777 777777777654332222    222345555566667777777777777654


No 17 
>d1qbkb_ a.118.1.1 (B:) Karyopherin beta2 {Human (Homo sapiens) [TaxId: 9606]}
Probab=96.60  E-value=0.0029  Score=51.08  Aligned_cols=90  Identities=17%  Similarity=0.236  Sum_probs=63.8

Q ss_pred             HHHHHH--HHHHHhhH-hHHHHH--hhccHHHHHHHhccCChHHH-HHHHHHHHhccCCCHH-HHHHHHhcCChHHHHhh
Q 044025           13 SKLKEN--TLDSNIVV-CMYTVI--VANIILLLVHLLQHAELEIK-EATWAISSATYGGSHE-HIQFLVSQGYIKPLCDL   85 (129)
Q Consensus        13 ~~~r~~--w~lsNI~~-qiq~vi--~~g~lp~L~~ll~~~~~~v~-eA~wal~Ni~~~~~~~-~i~~lv~~g~i~~l~~l   85 (129)
                      +..|++  .+++.|+. -.+.+.  -..++|.++..+++.++.+| .|+|+++.++....++ +-.+  -..+++.+...
T Consensus       409 ~~~reaa~~alg~i~eg~~~~~~~~l~~li~~l~~~l~d~~~~Vr~~a~~~l~~~~~~~~~~~~~~~--~~~~l~~ll~~  486 (888)
T d1qbkb_         409 WVVKESGILVLGAIAEGCMQGMIPYLPELIPHLIQCLSDKKALVRSITCWTLSRYAHWVVSQPPDTY--LKPLMTELLKR  486 (888)
T ss_dssp             HHHHHHHHHHHHHHTTTSHHHHTTTHHHHHHHHHHHTTSSCHHHHHHHHHHHHHTHHHHHSSCHHHH--TTTHHHHHHHH
T ss_pred             hHHHHHHHHHhhhhhhhHHHHhcccchhhhHHHHHhccCCCHHHHHHHHHHHHHHHHHhhhhhhhhh--hhhhHHHHHHH
Confidence            444543  38888776 222221  14678999999999999999 9999999887531111 1112  24578888888


Q ss_pred             cCCCCHHHHHHHHHHHhhc
Q 044025           86 LVCSDQRIVTVCLNGNRKL  104 (129)
Q Consensus        86 L~~~d~~~~~~aL~al~ni  104 (129)
                      +..+++++...+++++.++
T Consensus       487 l~d~~~~V~~~a~~al~~l  505 (888)
T d1qbkb_         487 ILDSNKRVQEAACSAFATL  505 (888)
T ss_dssp             HSSSCHHHHHHHHHHHHHH
T ss_pred             hcCCCHHHHHHHHHHHHHH
Confidence            8888999999999999876


No 18 
>d1oyza_ a.118.1.16 (A:) Hypothetical protein YibA {Escherichia coli [TaxId: 562]}
Probab=96.31  E-value=0.0078  Score=41.05  Aligned_cols=87  Identities=6%  Similarity=0.017  Sum_probs=51.6

Q ss_pred             cccCCCCChHHHHHHHHHHHhhHhHHHHHhhccHHHHHHHhccCChHHH-HHHHHHHHhccCCCHHHHHHHHhcCChHHH
Q 044025            4 QQKNPKLPLSKLKENTLDSNIVVCMYTVIVANIILLLVHLLQHAELEIK-EATWAISSATYGGSHEHIQFLVSQGYIKPL   82 (129)
Q Consensus         4 ~~~~~~~~~~~~r~~w~lsNI~~qiq~vi~~g~lp~L~~ll~~~~~~v~-eA~wal~Ni~~~~~~~~i~~lv~~g~i~~l   82 (129)
                      ..++..++.....++.+|..+..       ..++|.+++++++.++.+| .|+++|+++......+.  .     .++.+
T Consensus        26 ~~L~d~~~~vR~~A~~~L~~~~~-------~~~~~~l~~~l~d~~~~vr~~a~~aL~~l~~~~~~~~--~-----~~~~l   91 (276)
T d1oyza_          26 RLLDDHNSLKRISSARVLQLRGG-------QDAVRLAIEFCSDKNYIRRDIGAFILGQIKICKKCED--N-----VFNIL   91 (276)
T ss_dssp             HHTTCSSHHHHHHHHHHHHHHCC-------HHHHHHHHHHHTCSSHHHHHHHHHHHHHSCCCTTTHH--H-----HHHHH
T ss_pred             HHhcCCCHHHHHHHHHHHHhhCC-------HhHHHHHHHHHcCCCHHHHHHHHHHHHHhcccccccc--c-----hHHHH
Confidence            34443334343334456666532       3467999999999999999 99999998875432111  0     11122


Q ss_pred             Hh-hcCCCCHHHHHHHHHHHhhc
Q 044025           83 CD-LLVCSDQRIVTVCLNGNRKL  104 (129)
Q Consensus        83 ~~-lL~~~d~~~~~~aL~al~ni  104 (129)
                      .. +++.+++.+...++.+++++
T Consensus        92 ~~~~l~d~~~~vr~~a~~aL~~~  114 (276)
T d1oyza_          92 NNMALNDKSACVRATAIESTAQR  114 (276)
T ss_dssp             HHHHHHCSCHHHHHHHHHHHHHH
T ss_pred             HHHHhcCCChhHHHHHHHHHHHH
Confidence            22 33456666666666666654


No 19 
>d1b3ua_ a.118.1.2 (A:) Constant regulatory domain of protein phosphatase 2a, pr65alpha {Human (Homo sapiens) [TaxId: 9606]}
Probab=96.29  E-value=0.0078  Score=45.87  Aligned_cols=86  Identities=9%  Similarity=0.085  Sum_probs=60.5

Q ss_pred             HHHHHhhH-hHHHHHhhccHHHHHHHhccCChHHH-HHHHHHHHhccCCCHHHHHHHHhcCChHHHHhhcCCCCHHHHHH
Q 044025           19 TLDSNIVV-CMYTVIVANIILLLVHLLQHAELEIK-EATWAISSATYGGSHEHIQFLVSQGYIKPLCDLLVCSDQRIVTV   96 (129)
Q Consensus        19 w~lsNI~~-qiq~vi~~g~lp~L~~ll~~~~~~v~-eA~wal~Ni~~~~~~~~i~~lv~~g~i~~l~~lL~~~d~~~~~~   96 (129)
                      .++++++. --.......++|.+..++++.+.++| .|+++++.++.....+......-..++|.+..++...++.+...
T Consensus       264 ~~l~~l~~~~~~~~~~~~l~~~l~~ll~d~~~~vr~~a~~~l~~~~~~l~~~~~~~~~~~~i~~~l~~~~~d~~~~vr~~  343 (588)
T d1b3ua_         264 DKFTELQKAVGPEITKTDLVPAFQNLMKDCEAEVRAAASHKVKEFCENLSADCRENVIMSQILPCIKELVSDANQHVKSA  343 (588)
T ss_dssp             HTHHHHHHHHCHHHHHHTHHHHHHHHHTCSSHHHHHHHHHHHHHHHHTSCTTTHHHHHHHTHHHHHHHHHTCSCHHHHHH
T ss_pred             HhHHHHHHHhhhhhhhhhhhHHHHHHHhccchHHHHHHHHHHHHHHHHHhhhhhhhhhHHHHHHHHHHhhcCCChHHHHH
Confidence            47788776 22233446789999999999999999 99999999886432222222233457788888887778887777


Q ss_pred             HHHHHhhc
Q 044025           97 CLNGNRKL  104 (129)
Q Consensus        97 aL~al~ni  104 (129)
                      +..++..+
T Consensus       344 ~~~~l~~~  351 (588)
T d1b3ua_         344 LASVIMGL  351 (588)
T ss_dssp             HHTTGGGG
T ss_pred             HHHHHhhh
Confidence            77766554


No 20 
>d1oyza_ a.118.1.16 (A:) Hypothetical protein YibA {Escherichia coli [TaxId: 562]}
Probab=96.02  E-value=0.012  Score=40.12  Aligned_cols=60  Identities=5%  Similarity=-0.121  Sum_probs=50.3

Q ss_pred             hccHHHHHHHhccCChHHH-HHHHHHHHhccCCCHHHHHHHHhcCChHHHHhhcCCCCHHHHHHHHHHHhhcc
Q 044025           34 ANIILLLVHLLQHAELEIK-EATWAISSATYGGSHEHIQFLVSQGYIKPLCDLLVCSDQRIVTVCLNGNRKLG  105 (129)
Q Consensus        34 ~g~lp~L~~ll~~~~~~v~-eA~wal~Ni~~~~~~~~i~~lv~~g~i~~l~~lL~~~d~~~~~~aL~al~ni~  105 (129)
                      ....+.|.++|+++++.+| .|+.+|..+.   ++         .++|.+..++.++|+.+...++.+|+++.
T Consensus        18 ~~~~~~L~~~L~d~~~~vR~~A~~~L~~~~---~~---------~~~~~l~~~l~d~~~~vr~~a~~aL~~l~   78 (276)
T d1oyza_          18 KLNDDELFRLLDDHNSLKRISSARVLQLRG---GQ---------DAVRLAIEFCSDKNYIRRDIGAFILGQIK   78 (276)
T ss_dssp             TSCHHHHHHHTTCSSHHHHHHHHHHHHHHC---CH---------HHHHHHHHHHTCSSHHHHHHHHHHHHHSC
T ss_pred             cCCHHHHHHHhcCCCHHHHHHHHHHHHhhC---CH---------hHHHHHHHHHcCCCHHHHHHHHHHHHHhc
Confidence            3456778999999999999 9999998764   21         24688899999999999999999998874


No 21 
>d2vglb_ a.118.1.10 (B:) Adaptin beta subunit N-terminal fragment {Human (Homo sapiens) [TaxId: 9606]}
Probab=95.90  E-value=0.0018  Score=50.76  Aligned_cols=98  Identities=11%  Similarity=0.002  Sum_probs=63.7

Q ss_pred             cCCCCChHHHHHHHHHHHhhH-hHHHHHhhccHHHHHHHhccCChHHH-HHHHHHHHhccCCCHHHHHHHHhcCChHHHH
Q 044025            6 KNPKLPLSKLKENTLDSNIVV-CMYTVIVANIILLLVHLLQHAELEIK-EATWAISSATYGGSHEHIQFLVSQGYIKPLC   83 (129)
Q Consensus         6 ~~~~~~~~~~r~~w~lsNI~~-qiq~vi~~g~lp~L~~ll~~~~~~v~-eA~wal~Ni~~~~~~~~i~~lv~~g~i~~l~   83 (129)
                      ++.+.+....++++++..+.. .-+.+.+.+.+|.+..++.+.++.++ .|+.+++.++.......... +..+.++.++
T Consensus       127 L~D~~p~VRk~Aa~~l~kl~~~~p~~~~~~~~~~~L~~lL~D~n~~V~~~Al~~L~~I~~~~~~~~~~~-l~~~~i~~Ll  205 (579)
T d2vglb_         127 LKDEDPYVRKTAAVCVAKLHDINAQMVEDQGFLDSLRDLIADSNPMVVANAVAALSEISESHPNSNLLD-LNPQNINKLL  205 (579)
T ss_dssp             SSCSCHHHHHHHHHHHHHHHHSSCCCHHHHHHHHHHHHTTSCSCHHHHHHHHHHHHHHTTSCCSCCSCC-CHHHHHHHHH
T ss_pred             HhcCcHHHHHHHHHHHHHHhccChhhhhhhhHHHHHHHHHcCCChHHHHHHHHHHHHHHHhCccchhHH-hhHHHHHHHH
Confidence            334444444445679999877 22234457899999999999999999 99999999986421110000 1123455566


Q ss_pred             hhcCCCCHHHHHHHHHHHhhc
Q 044025           84 DLLVCSDQRIVTVCLNGNRKL  104 (129)
Q Consensus        84 ~lL~~~d~~~~~~aL~al~ni  104 (129)
                      ..+...++-.+..+++++.+.
T Consensus       206 ~~l~~~~~~~q~~il~~L~~~  226 (579)
T d2vglb_         206 TALNECTEWGQIFILDCLSNY  226 (579)
T ss_dssp             HHHHHCCHHHHHHHHHHHHTS
T ss_pred             hccCCCCHHHHHHHHHHHHHh
Confidence            666666777777777777655


No 22 
>d2vgla_ a.118.1.10 (A:) Adaptin alpha C subunit N-terminal fragment {Mouse (Mus musculus) [TaxId: 10090]}
Probab=94.52  E-value=0.023  Score=44.18  Aligned_cols=79  Identities=14%  Similarity=0.033  Sum_probs=56.5

Q ss_pred             HHHHHhhH-hHHHHHhhccHHHHHHHhc--cCChHHH-HHHHHHHHhccCCCHHHHHHHHhcCChHHHHhhcCCCCHHHH
Q 044025           19 TLDSNIVV-CMYTVIVANIILLLVHLLQ--HAELEIK-EATWAISSATYGGSHEHIQFLVSQGYIKPLCDLLVCSDQRIV   94 (129)
Q Consensus        19 w~lsNI~~-qiq~vi~~g~lp~L~~ll~--~~~~~v~-eA~wal~Ni~~~~~~~~i~~lv~~g~i~~l~~lL~~~d~~~~   94 (129)
                      .+++||.. .+-.    -+.|.+.+++.  +.++.+| .|++++..+... .|+.   +...+.++.+..+|..+|+.++
T Consensus       125 r~L~~i~~~~i~~----~l~~~V~k~l~~~d~~p~VRk~A~l~l~ki~~~-~pd~---~~~~~~~~~L~~lL~D~d~~V~  196 (584)
T d2vgla_         125 HCIANVGSREMAE----AFAGEIPKILVAGDTMDSVKQSAALCLLRLYRT-SPDL---VPMGDWTSRVVHLLNDQHLGVV  196 (584)
T ss_dssp             HHHHHHCCHHHHH----HHTTHHHHHHHCSSSCHHHHHHHHHHHHHHHHH-CGGG---CCCCSCHHHHHHHTTCSCHHHH
T ss_pred             HHHHcCCCHHHHH----HHHHHHHHhhccCCCcHHHHHHHHHHHHHHHHh-Chhh---hhhhhHHHHHHHHhcCCChhHH
Confidence            47777754 2222    24455555554  5568899 999999999865 3332   2235689999999999999999


Q ss_pred             HHHHHHHhhcc
Q 044025           95 TVCLNGNRKLG  105 (129)
Q Consensus        95 ~~aL~al~ni~  105 (129)
                      ..++.++..+.
T Consensus       197 ~aAl~ll~eI~  207 (584)
T d2vgla_         197 TAATSLITTLA  207 (584)
T ss_dssp             HHHHHHHHHHH
T ss_pred             HHHHHHHHHHH
Confidence            99999997764


No 23 
>d1u6gc_ a.118.1.2 (C:) Cullin-associated NEDD8-dissociated protein 1 (Tip120) {Human (Homo sapiens) [TaxId: 9606]}
Probab=93.19  E-value=0.072  Score=43.52  Aligned_cols=70  Identities=14%  Similarity=0.072  Sum_probs=57.1

Q ss_pred             hccHHHHHHHhccCChHHH-HHHHHHHHhccCCCHHHHHHHHhcCChHHHHhhcCCCCHHHHHHHHHHHhhcc
Q 044025           34 ANIILLLVHLLQHAELEIK-EATWAISSATYGGSHEHIQFLVSQGYIKPLCDLLVCSDQRIVTVCLNGNRKLG  105 (129)
Q Consensus        34 ~g~lp~L~~ll~~~~~~v~-eA~wal~Ni~~~~~~~~i~~lv~~g~i~~l~~lL~~~d~~~~~~aL~al~ni~  105 (129)
                      ..++|.|...+.++++.+| .|+.++.++..... +.+...+ ...+++|+..|..+|..+++.++.++..+.
T Consensus       961 ~~~lp~L~~~l~~~~~~~r~~ai~~l~~~~~~~~-~~~~~~l-~~li~~ll~~l~d~~~~vR~~al~~l~~~~ 1031 (1207)
T d1u6gc_         961 ETLLPRLKGYLISGSSYARSSVVTAVKFTISDHP-QPIDPLL-KNCIGDFLKTLEDPDLNVRRVALVTFNSAA 1031 (1207)
T ss_dssp             GGTHHHHTTTSSSSCHHHHHHHHHHTGGGCCSSC-CTHHHHH-HHHSTTTHHHHSSSSTHHHHHHHHHHHHHH
T ss_pred             HHHHHHHHHHhCCCCHHHHHHHHHHHHHHHHhcc-hhhHHHH-HHHHHHHHHHhCCCCHHHHHHHHHHHHHHH
Confidence            5689999999999999999 99999999887633 3333333 237888899999999999999999997653


No 24 
>d1ibrb_ a.118.1.1 (B:) Importin beta {Human (Homo sapiens) [TaxId: 9606]}
Probab=93.02  E-value=0.23  Score=35.25  Aligned_cols=71  Identities=15%  Similarity=0.196  Sum_probs=52.0

Q ss_pred             hccHHHHHHHhccC--ChHHH-HHHHHHHHhccCCCHHHHHHHHhcCChHHHHhhcCCCCHHHHHHHHHHHhhc
Q 044025           34 ANIILLLVHLLQHA--ELEIK-EATWAISSATYGGSHEHIQFLVSQGYIKPLCDLLVCSDQRIVTVCLNGNRKL  104 (129)
Q Consensus        34 ~g~lp~L~~ll~~~--~~~v~-eA~wal~Ni~~~~~~~~i~~lv~~g~i~~l~~lL~~~d~~~~~~aL~al~ni  104 (129)
                      ..+++.+...+.++  +.++| .|..+++++..................+.+..++..+++++...+++++.++
T Consensus       170 ~~il~~~~~~l~~~~~~~~v~~~a~~~l~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~l~~i  243 (458)
T d1ibrb_         170 NEILTAIIQGMRKEEPSNNVKLAATNALLNSLEFTKANFDKESERHFIMQVVCEATQCPDTRVRVAALQNLVKI  243 (458)
T ss_dssp             HHHHHHHHHHHSTTCCCHHHHHHHHHHHHHHTTTTHHHHTSHHHHHHHHHHHHHHTTCSSHHHHHHHHHHHHHH
T ss_pred             HHHHHHHHHHhcccccCHHHHHHHHHHHHHHHHhhhhhhhhHHHHHHhHhhHHHHhcCCCHHHHHHHHHHHHHH
Confidence            45788888888765  56899 9999999998763221111223334667778888889999999999999776


No 25 
>d2bpta1 a.118.1.1 (A:1-861) Importin beta {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]}
Probab=92.43  E-value=0.86  Score=34.75  Aligned_cols=68  Identities=9%  Similarity=0.110  Sum_probs=53.3

Q ss_pred             cHHHHHHHhccCChHHH-HHHHHHHHhccCCCHHHHHHHHhcCChHHHHhhcCCCCHHHHHHHHHHHhhc
Q 044025           36 IILLLVHLLQHAELEIK-EATWAISSATYGGSHEHIQFLVSQGYIKPLCDLLVCSDQRIVTVCLNGNRKL  104 (129)
Q Consensus        36 ~lp~L~~ll~~~~~~v~-eA~wal~Ni~~~~~~~~i~~lv~~g~i~~l~~lL~~~d~~~~~~aL~al~ni  104 (129)
                      +.+.+...+.+.+...| .|+.+++.++.+.+.......+ ..+++.+...+..+++.++..++++++++
T Consensus       370 ~~~~~~~~~~~~~~~~~~~a~~~l~~i~~~~~~~~~~~~l-~~~l~~l~~~l~d~~~~vr~~a~~~l~~l  438 (861)
T d2bpta1         370 VLEFVEQNITADNWRNREAAVMAFGSIMDGPDKVQRTYYV-HQALPSILNLMNDQSLQVKETTAWCIGRI  438 (861)
T ss_dssp             HHHHHHHHTTCSSHHHHHHHHHHHHHTSSSSCHHHHHHHH-HHHHHHHHHGGGCSCHHHHHHHHHHHHHH
T ss_pred             hcchhhhhhhhHHHHHHHHHHHHHHHHHhhcchhhHHHHH-HHHHHHHHHHhcCcchhhhhHHHHHHHHH
Confidence            34555666778899999 9999999999876544444333 24788999999999999999999999876


No 26 
>d2bpta1 a.118.1.1 (A:1-861) Importin beta {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]}
Probab=92.19  E-value=0.27  Score=37.72  Aligned_cols=86  Identities=9%  Similarity=0.098  Sum_probs=58.3

Q ss_pred             HHH-HHHHHhhH----hHHHHHhhccHHHHHHHhccCChHHH-HHHHHHHHhccCCCHHHHHHHHhcCChHHHHhhcCC-
Q 044025           16 KEN-TLDSNIVV----CMYTVIVANIILLLVHLLQHAELEIK-EATWAISSATYGGSHEHIQFLVSQGYIKPLCDLLVC-   88 (129)
Q Consensus        16 r~~-w~lsNI~~----qiq~vi~~g~lp~L~~ll~~~~~~v~-eA~wal~Ni~~~~~~~~i~~lv~~g~i~~l~~lL~~-   88 (129)
                      ..+ .++++++.    .....+ ..++|.+...+++.++.++ .|+.+++.++.... +.+...+ ..+++.+...+.. 
T Consensus       616 ~~~l~~l~~l~~~~~~~~~~~l-~~i~p~l~~~l~~~~~~v~~~a~~~l~~i~~~~~-~~~~~~~-~~i~~~L~~~l~~~  692 (861)
T d2bpta1         616 DDVFYAISALAASLGKGFEKYL-ETFSPYLLKALNQVDSPVSITAVGFIADISNSLE-EDFRRYS-DAMMNVLAQMISNP  692 (861)
T ss_dssp             HHHHHHHHHHHHHHGGGGHHHH-HHHHHHHHHHHHCTTSHHHHHHHHHHHHHHHHTG-GGGHHHH-HHHHHHHHHHHHCT
T ss_pred             HHHHHHHHHHHHHhhHHHHHHH-HHHhhHHHHHhCCCCHHHHHHHHHHHHHHHHHhH-HHhHhhH-HHHHHHHHHHhCCC
Confidence            344 48888877    222222 4688999999999999999 99999999886532 3322222 2367777777754 


Q ss_pred             -CCHHHHHHHHHHHhhc
Q 044025           89 -SDQRIVTVCLNGNRKL  104 (129)
Q Consensus        89 -~d~~~~~~aL~al~ni  104 (129)
                       .+..+...++.+++.+
T Consensus       693 ~~~~~~k~~~~~~l~~i  709 (861)
T d2bpta1         693 NARRELKPAVLSVFGDI  709 (861)
T ss_dssp             TCCTTHHHHHHHHHHHH
T ss_pred             CCCHHHHHHHHHHHHHH
Confidence             3455666778888765


No 27 
>d1qgra_ a.118.1.1 (A:) Importin beta {Human (Homo sapiens) [TaxId: 9606]}
Probab=91.27  E-value=0.86  Score=34.97  Aligned_cols=69  Identities=10%  Similarity=0.148  Sum_probs=55.0

Q ss_pred             ccHHHHHHHhccCChHHH-HHHHHHHHhccCCCHHHHHHHHhcCChHHHHhhcCCCCHHHHHHHHHHHhhc
Q 044025           35 NIILLLVHLLQHAELEIK-EATWAISSATYGGSHEHIQFLVSQGYIKPLCDLLVCSDQRIVTVCLNGNRKL  104 (129)
Q Consensus        35 g~lp~L~~ll~~~~~~v~-eA~wal~Ni~~~~~~~~i~~lv~~g~i~~l~~lL~~~d~~~~~~aL~al~ni  104 (129)
                      .++|.+.+.+.+++.+.| .++++++.+..+.........+ ..+++.+...+..+++.+...++++++++
T Consensus       366 ~~~~~i~~~l~~~~~~~r~~~~~~l~~~~~~~~~~~~~~~~-~~~~~~l~~~l~d~~~~vr~~a~~~l~~~  435 (876)
T d1qgra_         366 HVLPFIKEHIKNPDWRYRDAAVMAFGCILEGPEPSQLKPLV-IQAMPTLIELMKDPSVVVRDTAAWTVGRI  435 (876)
T ss_dssp             HHHHHHHHHTTCSSHHHHHHHHHHHHHTSSSSCHHHHHHHH-HHHHHHHHHHHTCSSHHHHHHHHHHHHHH
T ss_pred             hhHHHHHHhhccchHHHHHHHHHHHHhhhhhhhHHHHHHHH-HHHHHHHHHhhcCCccHHHHHHHHHHHHH
Confidence            356677777888999999 9999999998876555444333 34788899999999999999999999875


No 28 
>d2vgla_ a.118.1.10 (A:) Adaptin alpha C subunit N-terminal fragment {Mouse (Mus musculus) [TaxId: 10090]}
Probab=90.55  E-value=0.67  Score=35.52  Aligned_cols=78  Identities=10%  Similarity=0.049  Sum_probs=46.9

Q ss_pred             HHHHHhhH--hHHHHHhhccHHHHHHHh-ccCChHHH-HHHHHHHHhccCCCHHHHHHHHhcCChHHHHhhcCCCCHHHH
Q 044025           19 TLDSNIVV--CMYTVIVANIILLLVHLL-QHAELEIK-EATWAISSATYGGSHEHIQFLVSQGYIKPLCDLLVCSDQRIV   94 (129)
Q Consensus        19 w~lsNI~~--qiq~vi~~g~lp~L~~ll-~~~~~~v~-eA~wal~Ni~~~~~~~~i~~lv~~g~i~~l~~lL~~~d~~~~   94 (129)
                      .++++++.  .....+.. -...++..+ .+++..+| .|...++++++.   +.+..     +++.|.+.+...|+++.
T Consensus       343 ~~L~~L~~~~~~~~~~~~-~~~~il~~l~~~~~~~Ir~~aL~lL~~L~n~---~Ni~~-----Iv~eL~~yl~~~d~~~k  413 (584)
T d2vgla_         343 ESMCTLASSEFSHEAVKT-HIETVINALKTERDVSVRQRAVDLLYAMCDR---SNAQQ-----IVAEMLSYLETADYSIR  413 (584)
T ss_dssp             HHHHHHTTCTTTHHHHHT-THHHHHHHHTTCCCHHHHHHHHHHHHHHCCH---HHHHH-----HHHHHHHHHHHCCHHHH
T ss_pred             HHHHHHHccCCCHHHHHH-HHHHHHHhcccCchhHHHHHHHHHHHHhCCH---HHHHH-----HHHHHHHHHhhCCHHHH
Confidence            36666654  22222222 233344444 45667788 888888888754   33333     35566666666788888


Q ss_pred             HHHHHHHhhcc
Q 044025           95 TVCLNGNRKLG  105 (129)
Q Consensus        95 ~~aL~al~ni~  105 (129)
                      ..++.+++.++
T Consensus       414 ~~~i~~I~~la  424 (584)
T d2vgla_         414 EEIVLKVAILA  424 (584)
T ss_dssp             HHHHHHHHHHH
T ss_pred             HHHHHHHHHHH
Confidence            88888887763


No 29 
>d1qgra_ a.118.1.1 (A:) Importin beta {Human (Homo sapiens) [TaxId: 9606]}
Probab=89.99  E-value=0.84  Score=35.05  Aligned_cols=97  Identities=13%  Similarity=0.101  Sum_probs=62.6

Q ss_pred             CCCChHHHHHHH-HHHHhhH--hHHHH--HhhccHHHHHHHhccC--ChHHH-HHHHHHHHhccCCCHHHHHHHHhcCCh
Q 044025            8 PKLPLSKLKENT-LDSNIVV--CMYTV--IVANIILLLVHLLQHA--ELEIK-EATWAISSATYGGSHEHIQFLVSQGYI   79 (129)
Q Consensus         8 ~~~~~~~~r~~w-~lsNI~~--qiq~v--i~~g~lp~L~~ll~~~--~~~v~-eA~wal~Ni~~~~~~~~i~~lv~~g~i   79 (129)
                      |+.+......+. +++.|+.  .-...  .-..++|.+++.+.+.  +.++| .|..++.+................-++
T Consensus       140 ~~~~~~~~~~~l~~l~~i~~~~~~~~~~~~~~~il~~i~~~l~~~~~~~~v~~~a~~~l~~~~~~~~~~~~~~~~~~~i~  219 (876)
T d1qgra_         140 PNSTEHMKESTLEAIGYICQDIDPEQLQDKSNEILTAIIQGMRKEEPSNNVKLAATNALLNSLEFTKANFDKESERHFIM  219 (876)
T ss_dssp             TTCCHHHHHHHHHHHHHHHHHSCHHHHGGGHHHHHHHHHHHHSTTCSCHHHHHHHHHHHHHHGGGCHHHHTSHHHHHHHH
T ss_pred             CCCcHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHcCcCccHHHHHHHHHHHHHHHHHhhhhhhHHHHHHHHH
Confidence            333444444444 8888876  11111  1246789999988765  46889 999999988765332211112222356


Q ss_pred             HHHHhhcCCCCHHHHHHHHHHHhhc
Q 044025           80 KPLCDLLVCSDQRIVTVCLNGNRKL  104 (129)
Q Consensus        80 ~~l~~lL~~~d~~~~~~aL~al~ni  104 (129)
                      +.+...+.++++++...+++++..+
T Consensus       220 ~~l~~~~~~~~~~v~~~~~~~l~~l  244 (876)
T d1qgra_         220 QVVCEATQCPDTRVRVAALQNLVKI  244 (876)
T ss_dssp             HHHHHHTTCSSHHHHHHHHHHHHHH
T ss_pred             HHHHHHhcCCCHHHHHHHHHHHHHH
Confidence            7788888889999999999998765


No 30 
>d1u6gc_ a.118.1.2 (C:) Cullin-associated NEDD8-dissociated protein 1 (Tip120) {Human (Homo sapiens) [TaxId: 9606]}
Probab=89.02  E-value=0.52  Score=38.24  Aligned_cols=65  Identities=11%  Similarity=0.263  Sum_probs=50.2

Q ss_pred             hccHHHHHHHhccCChHHH-HHHHHHHHhccCCCHHHHHHHHhcCChHHHHhhcCCCCHHHHHHHHHHHhh
Q 044025           34 ANIILLLVHLLQHAELEIK-EATWAISSATYGGSHEHIQFLVSQGYIKPLCDLLVCSDQRIVTVCLNGNRK  103 (129)
Q Consensus        34 ~g~lp~L~~ll~~~~~~v~-eA~wal~Ni~~~~~~~~i~~lv~~g~i~~l~~lL~~~d~~~~~~aL~al~n  103 (129)
                      ..+++.+..+|++.+++|| .|+-+++-++.....++..+     +++.|+..+..++......+..++..
T Consensus        44 ~~i~~~ll~~L~D~~~~Vq~~A~k~l~~l~~~~~~~~~~~-----l~~~L~~~l~~~~~~~r~~~~~~L~~  109 (1207)
T d1u6gc_          44 RKVVKMILKLLEDKNGEVQNLAVKCLGPLVSKVKEYQVET-----IVDTLCTNMLSDKEQLRDISSIGLKT  109 (1207)
T ss_dssp             HHHHHHHHHHTTCSSHHHHHHHHHHHHHHHTTSCHHHHHH-----HHHHHHHHTTCSSSHHHHHHHHHHHH
T ss_pred             HHHHHHHHHHhCCCCHHHHHHHHHHHHHHHHhCcHhhHHH-----HHHHHHHHhcCCchhhhHHHHHHHHH
Confidence            4578999999999999999 99999999988766566655     45678887777676666666555543


No 31 
>d1ho8a_ a.118.1.9 (A:) Regulatory subunit H of the V-type ATPase {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]}
Probab=88.36  E-value=0.3  Score=37.57  Aligned_cols=69  Identities=28%  Similarity=0.240  Sum_probs=55.4

Q ss_pred             ccHHHHHHHhc----------cCChHHH-HHHHHHHHhccCCCHHHHHHHHhcCChHHHHhhcCCCCHHHHHHHHHHHhh
Q 044025           35 NIILLLVHLLQ----------HAELEIK-EATWAISSATYGGSHEHIQFLVSQGYIKPLCDLLVCSDQRIVTVCLNGNRK  103 (129)
Q Consensus        35 g~lp~L~~ll~----------~~~~~v~-eA~wal~Ni~~~~~~~~i~~lv~~g~i~~l~~lL~~~d~~~~~~aL~al~n  103 (129)
                      .++..|+++|+          +.|+.+. =||.-|+.++.. -|.-...+-+.|+=..++.+|+++|+++...||.|+..
T Consensus       392 ~llk~L~~lL~~~~~~~~~~~s~D~~~lAVAc~DiGefvr~-~P~gr~il~~lg~K~~vM~Lm~h~d~~Vr~eAL~avQk  470 (477)
T d1ho8a_         392 KIFRQLIELLQAKVRNGDVNAKQEKIIIQVALNDITHVVEL-LPESIDVLDKTGGKADIMELLNHSDSRVKYEALKATQA  470 (477)
T ss_dssp             HHHHHHHHHHHHHHHTTCCCSHHHHHHHHHHHHHHHHHHHH-CTTHHHHHHHHSHHHHHHHHTSCSSHHHHHHHHHHHHH
T ss_pred             HHHHHHHHHHhhcccccccccCCCcceeehhhhhHHHHHHH-CcchhHHHHHcCcHHHHHHHhcCCCHHHHHHHHHHHHH
Confidence            56788899986          3477788 999999999976 33333333356998999999999999999999999987


Q ss_pred             c
Q 044025          104 L  104 (129)
Q Consensus       104 i  104 (129)
                      +
T Consensus       471 l  471 (477)
T d1ho8a_         471 I  471 (477)
T ss_dssp             H
T ss_pred             H
Confidence            6


No 32 
>d1wa5c_ a.118.1.1 (C:) Exportin Cse1p {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]}
Probab=85.56  E-value=0.77  Score=36.08  Aligned_cols=52  Identities=12%  Similarity=0.035  Sum_probs=40.4

Q ss_pred             ChHHHHHHHHHHHhhH--hHHHHHhhccHHHHHHHhccCChHHH-HHHHHHHHhccC
Q 044025           11 PLSKLKENTLDSNIVV--CMYTVIVANIILLLVHLLQHAELEIK-EATWAISSATYG   64 (129)
Q Consensus        11 ~~~~~r~~w~lsNI~~--qiq~vi~~g~lp~L~~ll~~~~~~v~-eA~wal~Ni~~~   64 (129)
                      +....|.+|+++..+.  .-+..  ..+++.++..|.+.+..+| .|+||+.+++..
T Consensus       472 ~~lr~~~~~~i~~~~~~~~~~~~--~~~~~~l~~~L~~~~~~V~~~a~~al~~~~~~  526 (959)
T d1wa5c_         472 IILRVDAIKYIYTFRNQLTKAQL--IELMPILATFLQTDEYVVYTYAAITIEKILTI  526 (959)
T ss_dssp             HHHHHHHHHHHHHTGGGSCHHHH--HHHHHHHHHHTTCSCHHHHHHHHHHHHHHTTC
T ss_pred             HHHHHHHHHHHHHHHhhccHHHH--HHHHHHHHHHhCCCchhHHHHHHHHHHHHHHh
Confidence            3444556799999887  22222  5789999999999999999 999999999753


No 33 
>d1ho8a_ a.118.1.9 (A:) Regulatory subunit H of the V-type ATPase {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]}
Probab=83.98  E-value=3  Score=31.70  Aligned_cols=106  Identities=16%  Similarity=0.186  Sum_probs=66.9

Q ss_pred             HHHHhhH--hHHHHH---hhccHHHHHHHhcc-----------------CChHHH-HHHHHHHHhccCCCHHHHHHHHhc
Q 044025           20 LDSNIVV--CMYTVI---VANIILLLVHLLQH-----------------AELEIK-EATWAISSATYGGSHEHIQFLVSQ   76 (129)
Q Consensus        20 ~lsNI~~--qiq~vi---~~g~lp~L~~ll~~-----------------~~~~v~-eA~wal~Ni~~~~~~~~i~~lv~~   76 (129)
                      +++.+.+  +.+.++   +...++.++++|+.                 ..+.++ +++.++==++-.  ++-...+.+.
T Consensus       188 ~lq~llr~~~~R~~fw~~~~~~~~~l~~il~~a~~~~~~~~~~~~~~~~~~~Ql~Y~~ll~lWlLSF~--~~~~~~l~~~  265 (477)
T d1ho8a_         188 LLQELAVIPEYRDVIWLHEKKFMPTLFKILQRATDSQLATRIVATNSNHLGIQLQYHSLLLIWLLTFN--PVFANELVQK  265 (477)
T ss_dssp             HHHHHHTSHHHHHHHHTTHHHHHHHHHHHHHHHHC-------------CCHHHHHHHHHHHHHHHTTS--HHHHHHHHTT
T ss_pred             HHHHHhcCccHHHHHHHcccchHHHHHHHHHHHhcccccchhhcccCCCccHHHHHHHHHHHHHHHcC--HHHHHHHHHh
Confidence            4555544  333332   44566777777654                 134566 776655555543  3555666665


Q ss_pred             --CChHHHHhhcC-CCCHHHHHHHHHHHhhcccCCC---ChHHHHHHHhccchhhhc
Q 044025           77 --GYIKPLCDLLV-CSDQRIVTVCLNGNRKLGMDNR---VNVYTQMINECDGLDKIE  127 (129)
Q Consensus        77 --g~i~~l~~lL~-~~d~~~~~~aL~al~ni~~~~~---~~~~~~~i~e~ggl~~le  127 (129)
                        +.++.+++++. +...++++.++-++.|+.....   .......+..+++++.++
T Consensus       266 ~~~~i~~l~~i~~~s~KEKvvRv~l~~l~Nll~~~~~~~~~~~~~~~v~~~~l~~l~  322 (477)
T d1ho8a_         266 YLSDFLDLLKLVKITIKEKVSRLCISIILQCCSTRVKQHKKVIKQLLLLGNALPTVQ  322 (477)
T ss_dssp             SHHHHHHHHHHHHHCCSHHHHHHHHHHHHHTTSSSSTTHHHHHHHHHHHHCHHHHHH
T ss_pred             hhHHHHHHHHHHHhhhHHHHHHHHHHHHHHHhhhhhhhhhhHHHHHHHHcchhHHHH
Confidence              46999999885 5789999999999999853221   223445677888776654


No 34 
>d1upka_ a.118.1.15 (A:) Mo25 protein {Human (Homo sapiens) [TaxId: 9606]}
Probab=77.54  E-value=6.7  Score=28.31  Aligned_cols=63  Identities=13%  Similarity=0.122  Sum_probs=48.0

Q ss_pred             HHHHHhhccHHHHHHHhccCChHHH-HHHHHHHHhccC---CCHHHHHHHHhc-CChHHHHhhcCCCC
Q 044025           28 MYTVIVANIILLLVHLLQHAELEIK-EATWAISSATYG---GSHEHIQFLVSQ-GYIKPLCDLLVCSD   90 (129)
Q Consensus        28 iq~vi~~g~lp~L~~ll~~~~~~v~-eA~wal~Ni~~~---~~~~~i~~lv~~-g~i~~l~~lL~~~d   90 (129)
                      ++++...+++..|+..|..-+++.| +++-..+|+...   +..-.+.|++++ .++..|+.-...+|
T Consensus        62 ~~e~~~~d~l~~Li~~L~~L~fE~RKD~~~if~~llR~~~~~~~p~v~Yl~~~~eil~~L~~gye~~e  129 (330)
T d1upka_          62 AQELYNSGLLSTLVADLQLIDFEGKKDVAQIFNNILRRQIGTRTPTVEYICTQQNILFMLLKGYESPE  129 (330)
T ss_dssp             HHHHHHHSHHHHHHHTGGGSCHHHHHHHHHHHHHHHTCCBTTBCHHHHHHHTCTHHHHHHHHGGGSTT
T ss_pred             HHHHHHhChHHHHHHhCCCCCCchhhhHHHHHHHHhhcCCCCCCccHHHHHcCHHHHHHHHhhcCCcc
Confidence            5667888999999999999999999 999999999743   222357899854 56666666554433


No 35 
>d2b6ca1 a.118.1.17 (A:3-215) Hypothetical protein EF3068 {Enterococcus faecalis [TaxId: 1351]}
Probab=76.41  E-value=2.3  Score=28.41  Aligned_cols=46  Identities=13%  Similarity=0.234  Sum_probs=35.8

Q ss_pred             cHHHHHHHhccCChHHH-HHHHHHHHhccCCCHHHHHHHHhcCChHHH
Q 044025           36 IILLLVHLLQHAELEIK-EATWAISSATYGGSHEHIQFLVSQGYIKPL   82 (129)
Q Consensus        36 ~lp~L~~ll~~~~~~v~-eA~wal~Ni~~~~~~~~i~~lv~~g~i~~l   82 (129)
                      +++.+..++.+.++-|| -..|+|..++.. +|+.+...++.+.++++
T Consensus       155 ~~~~~~~~~~d~e~~i~kAigW~Lre~~k~-~p~~v~~fl~~~~L~~~  201 (213)
T d2b6ca1         155 LKKAIIYDRTTEEFFIQKAIGWSLRQYSKT-NPQWVEELMKELVLSPL  201 (213)
T ss_dssp             HHHHHHHTTTCCCHHHHHHHHHHHHHHTTT-CHHHHHHHHHHSCCCHH
T ss_pred             HHHHHHHhCCChHHHHHHHHHHHHHHHHHH-CHHHHHHHHHhCCCChH
Confidence            45566677788899999 999999999987 77887777766555544


No 36 
>d1wa5c_ a.118.1.1 (C:) Exportin Cse1p {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]}
Probab=71.75  E-value=4.5  Score=31.42  Aligned_cols=54  Identities=11%  Similarity=0.052  Sum_probs=42.7

Q ss_pred             CChHHH-HHHHHHHHhccCCCHHHHHHHHhcCChHHHHhhcCCCCHHHHHHHHHHHhhcc
Q 044025           47 AELEIK-EATWAISSATYGGSHEHIQFLVSQGYIKPLCDLLVCSDQRIVTVCLNGNRKLG  105 (129)
Q Consensus        47 ~~~~v~-eA~wal~Ni~~~~~~~~i~~lv~~g~i~~l~~lL~~~d~~~~~~aL~al~ni~  105 (129)
                      ....+| .|+|+++..+..-.++...     .+++.+++.|.++++.+...+.+|++++.
T Consensus       470 ~~~~lr~~~~~~i~~~~~~~~~~~~~-----~~~~~l~~~L~~~~~~V~~~a~~al~~~~  524 (959)
T d1wa5c_         470 PHIILRVDAIKYIYTFRNQLTKAQLI-----ELMPILATFLQTDEYVVYTYAAITIEKIL  524 (959)
T ss_dssp             SCHHHHHHHHHHHHHTGGGSCHHHHH-----HHHHHHHHHTTCSCHHHHHHHHHHHHHHT
T ss_pred             chHHHHHHHHHHHHHHHhhccHHHHH-----HHHHHHHHHhCCCchhHHHHHHHHHHHHH
Confidence            356789 9999999998765444332     47889999999889999999999998763


No 37 
>d2bnxa1 a.118.1.23 (A:133-475) Diaphanous protein homolog 1, Diap1 (Dia1, DRF1) {Mouse (Mus musculus) [TaxId: 10090]}
Probab=68.08  E-value=17  Score=25.74  Aligned_cols=88  Identities=14%  Similarity=0.018  Sum_probs=59.3

Q ss_pred             HHHHHH-HHHHhhH-hHHHHHhhccHHHHHHHhc---------cC--ChHHH-HHHHHHHHhccCCCHHHHHHHH-hcCC
Q 044025           14 KLKENT-LDSNIVV-CMYTVIVANIILLLVHLLQ---------HA--ELEIK-EATWAISSATYGGSHEHIQFLV-SQGY   78 (129)
Q Consensus        14 ~~r~~w-~lsNI~~-qiq~vi~~g~lp~L~~ll~---------~~--~~~v~-eA~wal~Ni~~~~~~~~i~~lv-~~g~   78 (129)
                      .++..| .|.+=.- =++.+ +++.+..|.++|.         .+  |.+.+ |+.-|+-.+... . .=.++++ ..++
T Consensus        23 ~L~sL~v~Lrt~~~sWv~~F-~~~G~~~L~~~L~~l~~~~~~~~~~~d~~~e~e~l~CLkalmn~-~-~G~~~vl~~~~~   99 (343)
T d2bnxa1          23 CLESLRVSLNNNPVSWVQTF-GAEGLASLLDILKRLHDEKEETSGNYDSRNQHEIIRCLKAFMNN-K-FGIKTMLETEEG   99 (343)
T ss_dssp             HHHHHHHHHHHSCHHHHHHH-HHHHHHHHHHHHHHHHTCCTTTCCTTHHHHHHHHHHHHHHHTSS-H-HHHHHHHHSSSH
T ss_pred             HHHHHHHHHhcCCchHHHHH-HhccHHHHHHHHHHHHhhcccccccccHHHHHHHHHHHHHHhcc-H-HHHHHHHcChHH
Confidence            455666 5655333 45555 4444445555553         11  34577 999999888875 2 3355666 4589


Q ss_pred             hHHHHhhcCCCCHHHHHHHHHHHhhc
Q 044025           79 IKPLCDLLVCSDQRIVTVCLNGNRKL  104 (129)
Q Consensus        79 i~~l~~lL~~~d~~~~~~aL~al~ni  104 (129)
                      +..++..|.++.+.+...|++.|..+
T Consensus       100 i~~l~~~L~s~~~~tr~~a~elL~~l  125 (343)
T d2bnxa1         100 ILLLVRAMDPAVPNMMIDAAKLLSAL  125 (343)
T ss_dssp             HHHHHHTCCTTSHHHHHHHHHHHHHH
T ss_pred             HHHHHHccCCCchHHHHHHHHHHHHH
Confidence            99999999999999999999888765


No 38 
>d1lrva_ a.118.1.5 (A:) Leucine-rich repeat variant {Azotobacter vinelandii [TaxId: 354]}
Probab=67.95  E-value=2.4  Score=28.99  Aligned_cols=65  Identities=8%  Similarity=0.122  Sum_probs=35.3

Q ss_pred             HHHHHHHhccCChHHH-HHHHHHH-----HhccCCCHHHHHHHHhcCChHHHHhhcCCCCHHHHHHHHHHH
Q 044025           37 ILLLVHLLQHAELEIK-EATWAIS-----SATYGGSHEHIQFLVSQGYIKPLCDLLVCSDQRIVTVCLNGN  101 (129)
Q Consensus        37 lp~L~~ll~~~~~~v~-eA~wal~-----Ni~~~~~~~~i~~lv~~g~i~~l~~lL~~~d~~~~~~aL~al  101 (129)
                      ++.|..+++++|+.|| .|++.+.     .+..+.+++--..+.+.=..+.|..++..+|+.+...+.+.+
T Consensus        68 ~~~L~~Ll~D~d~~VR~~AA~~Lp~~~L~~L~~D~d~~VR~~aa~~l~~~~L~~Ll~D~d~~VR~~aa~~~  138 (233)
T d1lrva_          68 VEALTPLIRDSDEVVRRAVAYRLPREQLSALMFDEDREVRITVADRLPLEQLEQMAADRDYLVRAYVVQRI  138 (233)
T ss_dssp             GGGGGGGTTCSSHHHHHHHHTTSCSGGGGGTTTCSCHHHHHHHHHHSCTGGGGGGTTCSSHHHHHHHHHHS
T ss_pred             HHHHHHHhcCCCHHHHHHHHHHcCHHHHHHHhcCCChhHHHHHHhccCHHHHHHHhcCCCHHHHHHHHhcc
Confidence            4556677777888888 7776542     233333322222222332345566666666666666665543


No 39 
>d1ujka_ a.118.9.2 (A:) ADP-ribosylation factor binding protein Gga1 {Human (Homo sapiens) [TaxId: 9606]}
Probab=60.35  E-value=12  Score=23.25  Aligned_cols=85  Identities=8%  Similarity=-0.044  Sum_probs=56.3

Q ss_pred             H-HHHHhhHhHHH--HHhhccHHHHHHHhccCChHHH-HHHHHHHHhccCCCHHHHHHHHhcCChHHHHhhcCC------
Q 044025           19 T-LDSNIVVCMYT--VIVANIILLLVHLLQHAELEIK-EATWAISSATYGGSHEHIQFLVSQGYIKPLCDLLVC------   88 (129)
Q Consensus        19 w-~lsNI~~qiq~--vi~~g~lp~L~~ll~~~~~~v~-eA~wal~Ni~~~~~~~~i~~lv~~g~i~~l~~lL~~------   88 (129)
                      | .+..||..|..  .--..++-.+-.=|.++++.++ -|...+--+.....+.--..+.+.+.+..|..++..      
T Consensus        26 w~~ileicD~I~~~~~~~k~a~r~l~krl~~~~~~~~l~aL~LLe~~vkNCG~~f~~evas~~Fl~~L~kli~~k~~~~~  105 (145)
T d1ujka_          26 WASINGFCEQLNEDFEGPPLATRLLAHKIQSPQEWEAIQALTVLETCMKSCGKRFHDEVGKFRFLNELIKVVSPKYLGSR  105 (145)
T ss_dssp             HHHHHHHHHHHTSSTTHHHHHHHHHHHHHTCSSHHHHHHHHHHHHHHHTSCCHHHHHHHTSHHHHHHHHHHHCTTTTGGG
T ss_pred             HHHHHHHHHHHhCCCccHHHHHHHHHHHHcCCCHHHHHHHHHHHHHHHHHHhHHHHHHHhhHHHHHHHHHHHhhccCCCC
Confidence            6 66666661111  0013456667777889999999 999999988877433333344577888888888752      


Q ss_pred             CCHHHHHHHHHHHhh
Q 044025           89 SDQRIVTVCLNGNRK  103 (129)
Q Consensus        89 ~d~~~~~~aL~al~n  103 (129)
                      .+..+..-++..+..
T Consensus       106 ~~~~Vk~kil~li~~  120 (145)
T d1ujka_         106 TSEKVKNKILELLYS  120 (145)
T ss_dssp             SCHHHHHHHHHHHHH
T ss_pred             CcHHHHHHHHHHHHH
Confidence            455677777777765


No 40 
>d1lrva_ a.118.1.5 (A:) Leucine-rich repeat variant {Azotobacter vinelandii [TaxId: 354]}
Probab=56.59  E-value=6.7  Score=26.53  Aligned_cols=64  Identities=5%  Similarity=-0.049  Sum_probs=33.6

Q ss_pred             HHHHHHhccCChHHH-HHHHHH-----HHhccCCCHHHHHHHHhcCChHHHHhhcCCCCHHHHHHHHHHH
Q 044025           38 LLLVHLLQHAELEIK-EATWAI-----SSATYGGSHEHIQFLVSQGYIKPLCDLLVCSDQRIVTVCLNGN  101 (129)
Q Consensus        38 p~L~~ll~~~~~~v~-eA~wal-----~Ni~~~~~~~~i~~lv~~g~i~~l~~lL~~~d~~~~~~aL~al  101 (129)
                      +.|..++.++++.|| .++..+     .-+..+.+++-...+...-..+.+..++...++.+...+...+
T Consensus       117 ~~L~~Ll~D~d~~VR~~aa~~~~~~~L~~L~~D~d~~VR~~aA~~~~~~~L~~l~~D~d~~VR~~aa~~L  186 (233)
T d1lrva_         117 EQLEQMAADRDYLVRAYVVQRIPPGRLFRFMRDEDRQVRKLVAKRLPEESLGLMTQDPEPEVRRIVASRL  186 (233)
T ss_dssp             GGGGGGTTCSSHHHHHHHHHHSCGGGGGGTTTCSCHHHHHHHHHHSCGGGGGGSTTCSSHHHHHHHHHHC
T ss_pred             HHHHHHhcCCCHHHHHHHHhccchhHHHHHhcCCCHHHHHHHHHhcCHHHHHHHccCCCHHHHHHHHHhc
Confidence            445556666677777 665431     1122333333223333333455566666667777777666655


No 41 
>d1mhqa_ a.118.9.2 (A:) ADP-ribosylation factor binding protein Gga2 {Human (Homo sapiens) [TaxId: 9606]}
Probab=55.81  E-value=19  Score=22.16  Aligned_cols=86  Identities=10%  Similarity=-0.022  Sum_probs=56.1

Q ss_pred             H-HHHHhhHhHHH--HHhhccHHHHHHHhccCChHHH-HHHHHHHHhccCCCHHHHHHHHhcCChHHHHhhcC------C
Q 044025           19 T-LDSNIVVCMYT--VIVANIILLLVHLLQHAELEIK-EATWAISSATYGGSHEHIQFLVSQGYIKPLCDLLV------C   88 (129)
Q Consensus        19 w-~lsNI~~qiq~--vi~~g~lp~L~~ll~~~~~~v~-eA~wal~Ni~~~~~~~~i~~lv~~g~i~~l~~lL~------~   88 (129)
                      | .+-.||..|..  .--..++-.+-.-|.++++.++ -|.-.+--+.....+.--..+.+...+..|..++.      .
T Consensus        19 w~~il~icD~I~~~~~~~k~a~ral~krl~~~n~~~~l~aL~LLe~~vkNcG~~fh~evask~Fl~~l~~li~~k~~~~~   98 (143)
T d1mhqa_          19 WSAIQNFCEQVNTDPNGPTHAPWLLAHKIQSPQEKEALYALTVLEMCMNHCGEKFHSEVAKFRFLNELIKVLSPKYLGSW   98 (143)
T ss_dssp             HHHHHHHHHHHHHSSHHHHHHHHHHHHHHTCSSHHHHHHHHHHHHHHHHHSCHHHHHHHTSHHHHHHHHHTTCCSTTSCC
T ss_pred             HHHHHHHHHHHHcCCCCHHHHHHHHHHHHcCCCHHHHHHHHHHHHHHHHHcCHHHHHHHhhHHHHHHHHHHHccccCCCC
Confidence            5 56666652221  1113466667777889999999 99988888876533232234446678888888775      2


Q ss_pred             CCHHHHHHHHHHHhhc
Q 044025           89 SDQRIVTVCLNGNRKL  104 (129)
Q Consensus        89 ~d~~~~~~aL~al~ni  104 (129)
                      .++.+..-++..+..-
T Consensus        99 ~~~~Vk~kil~li~~W  114 (143)
T d1mhqa_          99 ATGKVKGRVIEILFSW  114 (143)
T ss_dssp             CCHHHHHHHHHHHHHH
T ss_pred             CCHHHHHHHHHHHHHH
Confidence            4677887788877654


No 42 
>d1lsha1 a.118.4.1 (A:285-620) Lipovitellin-phosvitin complex, superhelical domain {Lamprey (Ichthyomyzon unicuspis) [TaxId: 30308]}
Probab=55.46  E-value=21  Score=25.04  Aligned_cols=89  Identities=17%  Similarity=0.069  Sum_probs=42.7

Q ss_pred             hHHHHHHH-HHHHhhH--hHHH-HHhhccHH----HHHHHhccCChHHH-HHHHHHHHhccCCCHHHHHHHHhcCChHHH
Q 044025           12 LSKLKENT-LDSNIVV--CMYT-VIVANIIL----LLVHLLQHAELEIK-EATWAISSATYGGSHEHIQFLVSQGYIKPL   82 (129)
Q Consensus        12 ~~~~r~~w-~lsNI~~--qiq~-vi~~g~lp----~L~~ll~~~~~~v~-eA~wal~Ni~~~~~~~~i~~lv~~g~i~~l   82 (129)
                      ....+.+| +++++..  ..+. -....+++    .+.+..+.++.+-+ -+.-||+|+-..   +.+.++...  ++..
T Consensus       141 ~~l~~~a~La~gslv~~~c~~~~~~~~~~~~~l~~~l~~~~~~~~~~~~~~~LkaLGN~g~p---~~i~~l~~~--l~~~  215 (336)
T d1lsha1         141 PILRKTAVLGYGSLVFRYCANTVSCPDELLQPLHDLLSQSSDRAKEEEIVLALKALGNAGQP---NSIKKIQRF--LPGQ  215 (336)
T ss_dssp             HHHHHHHHHHHHHHHHHHHTTCSSCCGGGTHHHHHHHHHHHHTTCHHHHHHHHHHHHHHTCG---GGHHHHHTT--STTS
T ss_pred             hhHHHHHHHHHHHHHHHHhcCCCCCcHHHHHHHHHHHHHhhcccchHHHHHHHHHHhccCCH---hHHHHHHHH--hccc
Confidence            34445667 8888776  1000 00112233    33344456677777 788888888543   333333321  1000


Q ss_pred             HhhcCCCCHHHHHHHHHHHhhcc
Q 044025           83 CDLLVCSDQRIVTVCLNGNRKLG  105 (129)
Q Consensus        83 ~~lL~~~d~~~~~~aL~al~ni~  105 (129)
                      ...-....+.++..+++|++++.
T Consensus       216 ~~~~~~~~~~vR~aAi~Alr~~~  238 (336)
T d1lsha1         216 GKSLDEYSTRVQAEAIMALRNIA  238 (336)
T ss_dssp             SSCCCCSCHHHHHHHHHTTTTGG
T ss_pred             ccccccccHHHHHHHHHHHHHhh
Confidence            00001123456666667766654


No 43 
>d1t06a_ a.118.1.17 (A:) Hypothetical protein BC3264 {Bacillus cereus (strain ATCC 14579 / DSM 31) [TaxId: 226900]}
Probab=52.98  E-value=13  Score=24.95  Aligned_cols=65  Identities=6%  Similarity=-0.013  Sum_probs=42.9

Q ss_pred             CCChHHHHHHH-HHHHhhH-----hHHHHHhhccHHHHHHHhccCChHHH-HHHHHHHHhccCCCHHHHHHHH
Q 044025            9 KLPLSKLKENT-LDSNIVV-----CMYTVIVANIILLLVHLLQHAELEIK-EATWAISSATYGGSHEHIQFLV   74 (129)
Q Consensus         9 ~~~~~~~r~~w-~lsNI~~-----qiq~vi~~g~lp~L~~ll~~~~~~v~-eA~wal~Ni~~~~~~~~i~~lv   74 (129)
                      +......|.+| .+.+...     +....--..+++.+-..+.+.++.+| -..|+|..+... +++.....+
T Consensus       119 S~~~w~rRag~~~~~~~~~~~~~~~~~~~~~~~~L~~~~~~i~d~~~~v~kAv~W~Lr~ig~~-~~~l~~~al  190 (235)
T d1t06a_         119 SGDELKMSAGWSCYCWLLGNRKDNAFSESKISDMLEMVKDTIHHSPERTKSAMNNFLNTVAIS-YVPLHEKAV  190 (235)
T ss_dssp             SCCHHHHHHHHHHHHHHHHHSCGGGSCHHHHHHHHHHHHHHGGGSCHHHHHHHHHHHHHHHHH-CGGGHHHHH
T ss_pred             CChHHHHHHHHHHHHHHHHhCccCCCCHHHHHHHHHHHHHhccCchHHHHHHHHHHHHHHhcc-ChHHHHHHH
Confidence            45667778888 6666543     11111114567777788999999999 999999998876 445444333


No 44 
>d1lsha1 a.118.4.1 (A:285-620) Lipovitellin-phosvitin complex, superhelical domain {Lamprey (Ichthyomyzon unicuspis) [TaxId: 30308]}
Probab=52.84  E-value=10  Score=26.79  Aligned_cols=29  Identities=17%  Similarity=0.151  Sum_probs=22.3

Q ss_pred             cHHHHHHHhcc-------CChHHH-HHHHHHHHhccC
Q 044025           36 IILLLVHLLQH-------AELEIK-EATWAISSATYG   64 (129)
Q Consensus        36 ~lp~L~~ll~~-------~~~~v~-eA~wal~Ni~~~   64 (129)
                      .++.+...+.+       .+..+| .|.||+.+++..
T Consensus       204 ~i~~l~~~l~~~~~~~~~~~~~vR~aAi~Alr~~~~~  240 (336)
T d1lsha1         204 SIKKIQRFLPGQGKSLDEYSTRVQAEAIMALRNIAKR  240 (336)
T ss_dssp             GHHHHHTTSTTSSSCCCCSCHHHHHHHHHTTTTGGGT
T ss_pred             HHHHHHHHhcccccccccccHHHHHHHHHHHHHhhhc
Confidence            56777777753       256899 999999998775


No 45 
>d1dvpa1 a.118.9.2 (A:1-145) Hrs {Fruit fly (Drosophila melanogaster) [TaxId: 7227]}
Probab=45.87  E-value=9.3  Score=23.73  Aligned_cols=69  Identities=7%  Similarity=0.029  Sum_probs=49.3

Q ss_pred             ccHHHHHHHhccCChHHH-HHHHHHHHhccCCCHHHHHHHH-hcCChHHHHhhcCC-CCHHHHHHHHHHHhhc
Q 044025           35 NIILLLVHLLQHAELEIK-EATWAISSATYGGSHEHIQFLV-SQGYIKPLCDLLVC-SDQRIVTVCLNGNRKL  104 (129)
Q Consensus        35 g~lp~L~~ll~~~~~~v~-eA~wal~Ni~~~~~~~~i~~lv-~~g~i~~l~~lL~~-~d~~~~~~aL~al~ni  104 (129)
                      .++-.+..-|+++++.++ -|.-.+-.+..... ..++..+ +.+.+..|..++.. .+..+..-+++.+..-
T Consensus        42 ~a~ral~krl~~~n~~v~l~aL~LLd~~vkNcG-~~f~~~i~s~~fl~~l~~l~~~~~~~~Vk~kil~li~~W  113 (145)
T d1dvpa1          42 NAFAAIKKKMNSPNPHSSCYSLLVLESIVKNCG-APVHEEVFTKENCEMFSSFLESTPHENVRQKMLELVQTW  113 (145)
T ss_dssp             HHHHHHHHHHTCSSHHHHHHHHHHHHHHHHHSH-HHHHHHHSSHHHHHHHHHHHHHCSCHHHHHHHHHHHHHH
T ss_pred             HHHHHHHHHHcCCCHHHHHHHHHHHHHHHHccc-hHHHHHHhhHHHHHHHHHHhcCCCCHHHHHHHHHHHHHH
Confidence            466677788899999999 99999988887632 3444444 56677777777654 4667777788877653


No 46 
>d1upka_ a.118.1.15 (A:) Mo25 protein {Human (Homo sapiens) [TaxId: 9606]}
Probab=45.77  E-value=46  Score=23.64  Aligned_cols=75  Identities=9%  Similarity=0.041  Sum_probs=59.6

Q ss_pred             HHHHhhccHHHHHHHhccCChHHH-HHHHHHHHhccCCCHHHHHHHHhcC---ChHHHHhhcCCCCHHHHHHHHHHHhhc
Q 044025           29 YTVIVANIILLLVHLLQHAELEIK-EATWAISSATYGGSHEHIQFLVSQG---YIKPLCDLLVCSDQRIVTVCLNGNRKL  104 (129)
Q Consensus        29 q~vi~~g~lp~L~~ll~~~~~~v~-eA~wal~Ni~~~~~~~~i~~lv~~g---~i~~l~~lL~~~d~~~~~~aL~al~ni  104 (129)
                      ..++.+.-+-.+.+....+.+++- +|.-.+--+-+. .+......++.+   ....+-.||.+++....+.+++-|+.+
T Consensus       149 k~iL~s~~f~~fF~yv~~~~FdiasDAf~TfkelLt~-hk~~~aefl~~Nyd~Ff~~~~~LL~s~NYVtrRqSlKLLgel  227 (330)
T d1upka_         149 KIILWSEQFYDFFRYVEMSTFDIASDAFATFKDLLTR-HKLLSAEFLEQHYDRFFSEYEKLLHSENYVTKRQSLKLLGEL  227 (330)
T ss_dssp             HHHHHSGGGGHHHHHTTCSSHHHHHHHHHHHHHHHHS-SHHHHHHHHHHTHHHHHHHHHHHTTCSSHHHHHHHHHHHHHH
T ss_pred             HHHHccHHHHHHHHHHcCCchHHHHHHHHHHHHHHHh-CHHHHHHHHHHhHHHHHHHHHHHhcCCchHHHHHHHHHHHHH
Confidence            446678888999999999999999 998888877765 444445555443   667778899999999999999999876


No 47 
>d1juqa_ a.118.9.2 (A:) ADP-ribosylation factor binding protein Gga3 {Human (Homo sapiens) [TaxId: 9606]}
Probab=35.34  E-value=45  Score=20.51  Aligned_cols=85  Identities=8%  Similarity=-0.030  Sum_probs=54.2

Q ss_pred             H-HHHHhhHhHHH--HHhhccHHHHHHHhccCChHHH-HHHHHHHHhccCCCHHHHH-HHHhcCChHHHHhhcCC-----
Q 044025           19 T-LDSNIVVCMYT--VIVANIILLLVHLLQHAELEIK-EATWAISSATYGGSHEHIQ-FLVSQGYIKPLCDLLVC-----   88 (129)
Q Consensus        19 w-~lsNI~~qiq~--vi~~g~lp~L~~ll~~~~~~v~-eA~wal~Ni~~~~~~~~i~-~lv~~g~i~~l~~lL~~-----   88 (129)
                      | .+-.||..|..  .--..++-.+-.-|.++++.++ -|.-.+-.+..... ..++ .+.+...+..|..++..     
T Consensus        20 w~~ileicD~In~~~~~~k~a~rai~krl~~~~~~~~l~aL~LLe~~vkNCG-~~F~~evask~Fl~~l~kli~~k~~~~   98 (151)
T d1juqa_          20 WEYIIGFCDQINKELEGPQIAVRLLAHKIQSPQEWEALQALTVLEACMKNCG-RRFHNEVGKFRFLNELIKVVSPKYLGD   98 (151)
T ss_dssp             HHHHHHHHHHHHHSTTHHHHHHHHHHHHHTCSSHHHHHHHHHHHHHHHHHSH-HHHHHHHTSHHHHHHHHHHHCCCCCCT
T ss_pred             HHHHHHHHHHHhcCCccHHHHHHHHHHHHcCCCHHHHHHHHHHHHHHHHHcc-HHHHHHHhhHHHHHHHHHHHcccCCCC
Confidence            5 55666662211  1113456667777889999999 98888888876533 3343 34466777778877753     


Q ss_pred             -CCHHHHHHHHHHHhhc
Q 044025           89 -SDQRIVTVCLNGNRKL  104 (129)
Q Consensus        89 -~d~~~~~~aL~al~ni  104 (129)
                       .++.+..-++..+..-
T Consensus        99 ~~~~~Vk~kil~ll~~W  115 (151)
T d1juqa_          99 RVSEKVKTKVIELLYSW  115 (151)
T ss_dssp             TSCHHHHHHHHHHHHHH
T ss_pred             cccHHHHHHHHHHHHHH
Confidence             3556777777777653


No 48 
>d1wy6a1 a.118.20.1 (A:7-167) Hypothetical protein ST1625 {Archaeon Sulfolobus tokodaii [TaxId: 111955]}
Probab=34.05  E-value=11  Score=23.91  Aligned_cols=73  Identities=12%  Similarity=0.083  Sum_probs=43.1

Q ss_pred             HHHHhhccHHHHHHHhcc-CChHHH-HHHHHHHHhccCCCHHHHHHHHh----------cCChHHHHh--hcCCCCHHHH
Q 044025           29 YTVIVANIILLLVHLLQH-AELEIK-EATWAISSATYGGSHEHIQFLVS----------QGYIKPLCD--LLVCSDQRIV   94 (129)
Q Consensus        29 q~vi~~g~lp~L~~ll~~-~~~~v~-eA~wal~Ni~~~~~~~~i~~lv~----------~g~i~~l~~--lL~~~d~~~~   94 (129)
                      ...+-.|.+..=+++++. ..+.-+ |+-|.+||+....+-+-.-..++          ++=++..+.  .+...+.+.+
T Consensus        10 Kk~ildG~ve~Gveii~k~~~ss~~~E~NW~ICNiidt~dC~~v~~~Ld~IG~~FDls~C~Nlk~vv~C~~~~n~~se~v   89 (161)
T d1wy6a1          10 KKFLLDGYIDEGVKIVLEITKSSTKSEYNWFICNLLESIDCRYMFQVLDKIGSYFDLDKCQNLKSVVECGVINNTLNEHV   89 (161)
T ss_dssp             HHHHHTTCHHHHHHHHHHHHHHSCHHHHTHHHHHHHHHCCHHHHHHHHHHHGGGSCGGGCSCTHHHHHHHHHTTCCCHHH
T ss_pred             HHHHHhhhHHhHHHHHHHHcccCCccccceeeeecccccchHHHHHHHHHHhhhcCchhhhcHHHHHHHHHHhcchHHHH
Confidence            445556777777777664 355667 99999999998766432222221          122333322  2334556666


Q ss_pred             HHHHHHH
Q 044025           95 TVCLNGN  101 (129)
Q Consensus        95 ~~aL~al  101 (129)
                      ..||+.|
T Consensus        90 dlALd~l   96 (161)
T d1wy6a1          90 NKALDIL   96 (161)
T ss_dssp             HHHHHHH
T ss_pred             HHHHHHH
Confidence            7777766


No 49 
>d1fs1b1 a.157.1.1 (B:86-140) Cyclin A/CDK2-associated p45, Skp1 {Human (Homo sapiens) [TaxId: 9606]}
Probab=29.66  E-value=16  Score=18.96  Aligned_cols=22  Identities=14%  Similarity=0.122  Sum_probs=18.7

Q ss_pred             HHHHHHHHhccCCCHHHHHHHH
Q 044025           53 EATWAISSATYGGSHEHIQFLV   74 (129)
Q Consensus        53 eA~wal~Ni~~~~~~~~i~~lv   74 (129)
                      -+|-.+++.+.|-|+++++.+.
T Consensus        33 l~c~~vA~~ikgKt~eeiR~~f   54 (55)
T d1fs1b1          33 VTCKTVANMIKGKTPEEIRKTF   54 (55)
T ss_dssp             HHHHHHHHHHTTCCHHHHHHHT
T ss_pred             HHHHHHHHHHcCCCHHHHHHHh
Confidence            7888999999998999988753


No 50 
>d1uoua1 a.46.2.1 (A:33-100) Thymidine phosphorylase {Human (Homo sapiens) [TaxId: 9606]}
Probab=26.26  E-value=32  Score=18.15  Aligned_cols=37  Identities=8%  Similarity=0.110  Sum_probs=24.7

Q ss_pred             HHHHHHHhccCChHHH-HHHHHHHHhccCC-CHHHHHHH
Q 044025           37 ILLLVHLLQHAELEIK-EATWAISSATYGG-SHEHIQFL   73 (129)
Q Consensus        37 lp~L~~ll~~~~~~v~-eA~wal~Ni~~~~-~~~~i~~l   73 (129)
                      +|-+++-+.++..-.+ |+-|++..+..|. ++.|+..+
T Consensus         4 ~~eiI~k~~~g~~Ls~~E~~~~~~~i~~g~~s~~qi~af   42 (68)
T d1uoua1           4 LPELIRMKRDGGRLSEADIRGFVAAVVNGSAQGAQIGAM   42 (68)
T ss_dssp             HHHHHHHHHTTCCCCHHHHHHHHHHHHHTCSCHHHHHHH
T ss_pred             HHHHHHHHHCCCCCCHHHHHHHHHHHHcCCCCHHHHHHH
Confidence            4556666667766667 8888888888873 44555443


No 51 
>d1nexa1 a.157.1.1 (A:116-185) Centromere DNA-binding protein complex Cbf3 subunit D, CBF3D {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]}
Probab=23.45  E-value=34  Score=18.49  Aligned_cols=22  Identities=18%  Similarity=0.149  Sum_probs=19.1

Q ss_pred             HHHHHHHHhccCCCHHHHHHHH
Q 044025           53 EATWAISSATYGGSHEHIQFLV   74 (129)
Q Consensus        53 eA~wal~Ni~~~~~~~~i~~lv   74 (129)
                      -+|-.+++...|-||++++.+.
T Consensus        34 l~c~~vA~~ikgkt~eeiR~~f   55 (70)
T d1nexa1          34 AGCKVVAEMIRGRSPEEIRRTF   55 (70)
T ss_dssp             HHHHHHHHHHTTCCHHHHHHHH
T ss_pred             HHHHHHHHHHccCCHHHHHHHh
Confidence            7888899999998999998776


No 52 
>d2euca1 a.249.1.1 (A:1-113) Hypothetical protein YfmB {Bacillus subtilis [TaxId: 1423]}
Probab=22.73  E-value=32  Score=20.25  Aligned_cols=17  Identities=12%  Similarity=-0.005  Sum_probs=13.8

Q ss_pred             ChHHHHHHHHHHHhhHh
Q 044025           11 PLSKLKENTLDSNIVVC   27 (129)
Q Consensus        11 ~~~~~r~~w~lsNI~~q   27 (129)
                      |+....++|.+|.+..|
T Consensus         5 SpEQq~NAWivSDLVKQ   21 (113)
T d2euca1           5 SPEQQYNAWIVSDLVKQ   21 (113)
T ss_dssp             CHHHHHHHHHHHHHHHH
T ss_pred             CHHHHhhHHHHHHHHHH
Confidence            56778899999999763


No 53 
>d1szaa_ a.118.9.4 (A:) PCF11 protein {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]}
Probab=22.50  E-value=78  Score=19.03  Aligned_cols=65  Identities=12%  Similarity=0.027  Sum_probs=46.0

Q ss_pred             cHHHHHHHhccCChHHH-HHHHHHHHhccCCCHHHHHHHHhcCChHHHHhhcCCCCHHHHHHHHHHH
Q 044025           36 IILLLVHLLQHAELEIK-EATWAISSATYGGSHEHIQFLVSQGYIKPLCDLLVCSDQRIVTVCLNGN  101 (129)
Q Consensus        36 ~lp~L~~ll~~~~~~v~-eA~wal~Ni~~~~~~~~i~~lv~~g~i~~l~~lL~~~d~~~~~~aL~al  101 (129)
                      ++..+.+-+....++-| -..|.+.-++.... .+....++.++.+.|.+.....++++..-+.+-+
T Consensus        44 Iv~~i~~~i~~~~~~~KL~~LYLiddI~~n~~-~~y~~~f~~~l~~~f~~~y~~~~~~~r~kl~rll  109 (144)
T d1szaa_          44 FVDAIESRIEKCMPKQKLYAFYALDSICKNVG-SPYTIYFSRNLFNLYKRTYLLVDNTTRTKLINMF  109 (144)
T ss_dssp             HHHHHHHHHHHSCHHHHHHHHHHHHHHHHHTC-TTHHHHHHTTHHHHHHHHHTTSCHHHHHHHHHHH
T ss_pred             HHHHHHHHHhccCcccchhhhhhHHHHHHHhH-HHHHHHHHHHHHHHHHHHHHcCCHHHHHHHHHHH
Confidence            33455556677788999 99999999987533 3456667777777888877777877777665544


No 54 
>d1eara2 d.58.38.1 (A:75-142) Urease metallochaperone UreE, C-terminal domain {Bacillus pasteurii [TaxId: 1474]}
Probab=21.74  E-value=20  Score=19.46  Aligned_cols=18  Identities=17%  Similarity=-0.129  Sum_probs=10.9

Q ss_pred             CCCCChHHHHHHHHHHHh
Q 044025            7 NPKLPLSKLKENTLDSNI   24 (129)
Q Consensus         7 ~~~~~~~~~r~~w~lsNI   24 (129)
                      +|++...+.|.||-|.|-
T Consensus         8 ~~~~~~el~~~a~hlGNR   25 (68)
T d1eara2           8 KPQTMQEMGKMAFEIGNR   25 (68)
T ss_dssp             ECSSHHHHHHHHHHHHHT
T ss_pred             cCCCHHHHHHHHHHHcCC
Confidence            355666666666666664


No 55 
>d1utca1 a.118.1.4 (A:331-355) Clathrin heavy-chain linker domain {Rat (Rattus norvegicus) [TaxId: 10116]}
Probab=21.18  E-value=16  Score=15.91  Aligned_cols=19  Identities=32%  Similarity=0.627  Sum_probs=14.5

Q ss_pred             hccHHHHHHHhccCChHHH
Q 044025           34 ANIILLLVHLLQHAELEIK   52 (129)
Q Consensus        34 ~g~lp~L~~ll~~~~~~v~   52 (129)
                      .+++|.+...|+++|...|
T Consensus         2 eniipyi~~vlqnpdlalr   20 (26)
T d1utca1           2 ENIIPYITNVLQNPDLALR   20 (26)
T ss_dssp             TTHHHHHHHTTCCHHHHHH
T ss_pred             CcchhhhhhhccChhHHHH
Confidence            4678888888888776665


Done!