Query 044031
Match_columns 468
No_of_seqs 169 out of 1582
Neff 9.8
Searched_HMMs 46136
Date Fri Mar 29 10:48:52 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/044031.a3m -d /work/01045/syshi/HHdatabase/Cdd.hhm -o /work/01045/syshi/hhsearch_cdd/044031hhsearch_cdd -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 PLN00164 glucosyltransferase; 100.0 2.6E-73 5.6E-78 567.7 47.1 451 2-467 3-472 (480)
2 PLN02992 coniferyl-alcohol glu 100.0 6.8E-73 1.5E-77 559.1 44.6 439 2-467 5-468 (481)
3 PLN03015 UDP-glucosyl transfer 100.0 1.3E-72 2.7E-77 553.9 45.2 444 1-467 2-467 (470)
4 PLN02173 UDP-glucosyl transfer 100.0 5.4E-72 1.2E-76 549.8 44.3 423 2-468 5-448 (449)
5 PLN02410 UDP-glucoronosyl/UDP- 100.0 2.4E-71 5.2E-76 547.9 46.5 428 3-467 8-449 (451)
6 PLN02207 UDP-glycosyltransfera 100.0 5E-71 1.1E-75 544.9 45.6 449 1-467 2-464 (468)
7 PLN03004 UDP-glycosyltransfera 100.0 7.4E-71 1.6E-75 542.1 42.0 433 2-457 3-450 (451)
8 PLN02555 limonoid glucosyltran 100.0 2.8E-70 6.1E-75 542.0 46.4 440 2-467 7-468 (480)
9 PLN02863 UDP-glucoronosyl/UDP- 100.0 5.4E-70 1.2E-74 541.9 44.3 436 2-467 9-470 (477)
10 PLN02562 UDP-glycosyltransfera 100.0 1.8E-69 3.9E-74 536.2 45.5 430 3-467 7-448 (448)
11 PLN02554 UDP-glycosyltransfera 100.0 1.2E-69 2.6E-74 543.6 44.6 451 1-467 1-477 (481)
12 PLN02210 UDP-glucosyl transfer 100.0 1.8E-69 4E-74 536.7 45.3 430 2-468 8-455 (456)
13 PLN02152 indole-3-acetate beta 100.0 3.4E-69 7.4E-74 530.9 43.3 426 1-467 1-455 (455)
14 PLN02208 glycosyltransferase f 100.0 4.9E-69 1.1E-73 530.2 42.7 413 2-467 4-438 (442)
15 PLN02534 UDP-glycosyltransfera 100.0 7.2E-69 1.6E-73 532.6 44.0 444 3-467 9-485 (491)
16 PLN02167 UDP-glycosyltransfera 100.0 3.1E-68 6.7E-73 532.6 45.2 447 2-467 3-471 (475)
17 PLN00414 glycosyltransferase f 100.0 4.4E-68 9.6E-73 524.0 42.6 417 2-467 4-439 (446)
18 PLN02764 glycosyltransferase f 100.0 8.9E-68 1.9E-72 518.1 42.5 417 2-467 5-444 (453)
19 PLN03007 UDP-glucosyltransfera 100.0 6.6E-67 1.4E-71 524.5 45.2 445 2-467 5-479 (482)
20 PLN02670 transferase, transfer 100.0 5.1E-67 1.1E-71 517.0 42.7 432 2-467 6-464 (472)
21 PLN02448 UDP-glycosyltransfera 100.0 9E-67 1.9E-71 521.0 43.7 431 2-468 10-457 (459)
22 PHA03392 egt ecdysteroid UDP-g 100.0 1.7E-42 3.6E-47 348.6 33.6 371 4-446 22-449 (507)
23 PF00201 UDPGT: UDP-glucoronos 100.0 7.5E-45 1.6E-49 371.8 10.0 181 232-446 245-426 (500)
24 KOG1192 UDP-glucuronosyl and U 100.0 6.4E-42 1.4E-46 350.2 14.9 406 3-444 6-437 (496)
25 TIGR01426 MGT glycosyltransfer 100.0 6.8E-38 1.5E-42 310.5 27.8 346 8-445 1-375 (392)
26 cd03784 GT1_Gtf_like This fami 100.0 3E-38 6.4E-43 314.5 25.0 364 3-445 1-387 (401)
27 COG1819 Glycosyl transferases, 100.0 4.9E-37 1.1E-41 300.9 23.6 377 3-465 2-397 (406)
28 PRK12446 undecaprenyldiphospho 100.0 2E-28 4.3E-33 237.2 27.2 320 1-438 1-335 (352)
29 COG0707 MurG UDP-N-acetylgluco 99.9 8.4E-25 1.8E-29 209.2 26.9 322 4-440 2-339 (357)
30 PF13528 Glyco_trans_1_3: Glyc 99.9 3.7E-21 8E-26 185.5 23.1 297 4-423 2-317 (318)
31 TIGR00661 MJ1255 conserved hyp 99.8 8.6E-19 1.9E-23 168.7 24.4 124 270-427 188-315 (321)
32 PRK00726 murG undecaprenyldiph 99.8 4.2E-17 9.1E-22 159.9 28.1 317 2-436 1-335 (357)
33 cd03785 GT1_MurG MurG is an N- 99.8 4.3E-17 9.3E-22 159.4 25.9 323 4-439 1-338 (350)
34 TIGR01133 murG undecaprenyldip 99.7 2.8E-15 6.1E-20 146.4 27.1 88 337-438 243-334 (348)
35 TIGR00215 lpxB lipid-A-disacch 99.7 5.9E-16 1.3E-20 152.3 19.0 347 3-463 6-383 (385)
36 PRK13609 diacylglycerol glucos 99.7 1.3E-14 2.8E-19 143.5 21.6 145 269-438 201-351 (380)
37 PRK00025 lpxB lipid-A-disaccha 99.6 5.7E-14 1.2E-18 138.9 20.3 153 269-443 185-359 (380)
38 PRK13608 diacylglycerol glucos 99.6 3.1E-12 6.7E-17 126.6 27.3 147 269-440 201-353 (391)
39 TIGR03590 PseG pseudaminic aci 99.5 1.9E-13 4.1E-18 128.4 16.6 104 271-384 171-278 (279)
40 PF04101 Glyco_tran_28_C: Glyc 99.5 1.1E-15 2.4E-20 132.6 -0.2 138 272-428 1-146 (167)
41 TIGR03492 conserved hypothetic 99.5 1.7E-11 3.7E-16 120.8 24.8 329 12-427 6-365 (396)
42 PLN02605 monogalactosyldiacylg 99.5 3.6E-11 7.7E-16 118.9 26.4 179 233-438 173-361 (382)
43 COG4671 Predicted glycosyl tra 99.4 3.6E-10 7.9E-15 103.8 24.3 327 3-425 10-364 (400)
44 PLN02871 UDP-sulfoquinovose:DA 99.3 5.5E-09 1.2E-13 106.1 29.5 141 272-440 264-415 (465)
45 cd03814 GT1_like_2 This family 99.3 1.1E-08 2.3E-13 100.0 29.9 140 272-440 198-347 (364)
46 cd03800 GT1_Sucrose_synthase T 99.2 3.3E-08 7.3E-13 98.1 30.8 148 272-439 221-382 (398)
47 cd03794 GT1_wbuB_like This fam 99.1 8E-08 1.7E-12 94.4 28.7 147 270-441 219-381 (394)
48 PF03033 Glyco_transf_28: Glyc 99.1 1.1E-11 2.4E-16 104.0 0.9 118 5-137 1-133 (139)
49 cd03823 GT1_ExpE7_like This fa 99.1 1.2E-07 2.7E-12 92.2 28.2 142 271-438 191-342 (359)
50 PRK05749 3-deoxy-D-manno-octul 99.1 5.1E-08 1.1E-12 98.0 25.7 85 340-441 315-404 (425)
51 cd03817 GT1_UGDG_like This fam 99.1 3.9E-07 8.4E-12 89.0 29.5 143 272-442 203-360 (374)
52 cd03816 GT1_ALG1_like This fam 99.0 9E-07 1.9E-11 88.5 32.1 91 328-440 294-399 (415)
53 PRK10307 putative glycosyl tra 99.0 1.2E-06 2.6E-11 87.7 32.0 143 272-441 230-389 (412)
54 cd04962 GT1_like_5 This family 99.0 5.3E-07 1.2E-11 88.7 28.5 92 328-439 253-350 (371)
55 cd03808 GT1_cap1E_like This fa 98.9 2.6E-06 5.7E-11 82.5 30.0 147 270-439 187-343 (359)
56 cd03795 GT1_like_4 This family 98.9 1.2E-06 2.5E-11 85.6 27.5 144 272-441 192-348 (357)
57 cd03818 GT1_ExpC_like This fam 98.9 4E-06 8.7E-11 83.4 31.2 97 327-441 280-382 (396)
58 cd03801 GT1_YqgM_like This fam 98.9 5.1E-06 1.1E-10 80.6 30.2 92 326-437 254-353 (374)
59 TIGR00236 wecB UDP-N-acetylglu 98.9 5.5E-07 1.2E-11 88.6 22.5 156 271-463 198-362 (365)
60 TIGR03449 mycothiol_MshA UDP-N 98.9 3.4E-06 7.4E-11 84.2 28.2 94 327-440 282-383 (405)
61 cd03825 GT1_wcfI_like This fam 98.9 7.9E-06 1.7E-10 80.0 30.4 93 327-439 243-344 (365)
62 cd03820 GT1_amsD_like This fam 98.9 2.7E-06 5.9E-11 82.0 26.6 148 272-441 179-335 (348)
63 cd03786 GT1_UDP-GlcNAc_2-Epime 98.8 1.5E-06 3.3E-11 85.3 22.1 132 269-427 197-338 (363)
64 COG3980 spsG Spore coat polysa 98.7 4.8E-07 1E-11 81.2 15.4 138 272-435 160-299 (318)
65 cd03821 GT1_Bme6_like This fam 98.7 2.3E-05 5E-10 76.4 28.9 93 327-439 261-359 (375)
66 cd05844 GT1_like_7 Glycosyltra 98.7 5.9E-06 1.3E-10 81.1 24.4 93 327-439 244-350 (367)
67 cd03819 GT1_WavL_like This fam 98.7 1.7E-05 3.6E-10 77.4 27.1 150 271-441 185-347 (355)
68 TIGR02472 sucr_P_syn_N sucrose 98.7 5.2E-05 1.1E-09 76.5 30.7 94 327-438 316-419 (439)
69 cd03798 GT1_wlbH_like This fam 98.7 4.6E-05 1E-09 74.1 29.7 132 272-428 203-346 (377)
70 cd03805 GT1_ALG2_like This fam 98.7 3.8E-05 8.2E-10 76.2 28.9 148 271-439 211-378 (392)
71 COG1519 KdtA 3-deoxy-D-manno-o 98.7 3.4E-06 7.4E-11 80.7 19.4 322 7-445 53-406 (419)
72 cd03822 GT1_ecORF704_like This 98.7 7.3E-05 1.6E-09 72.9 29.9 96 327-441 246-350 (366)
73 cd03796 GT1_PIG-A_like This fa 98.6 3.9E-05 8.5E-10 76.4 27.6 131 271-427 193-334 (398)
74 TIGR02470 sucr_synth sucrose s 98.6 8.7E-05 1.9E-09 78.1 29.7 64 357-438 658-726 (784)
75 PF04007 DUF354: Protein of un 98.6 3.8E-05 8.2E-10 73.3 24.6 279 5-391 3-290 (335)
76 KOG3349 Predicted glycosyltran 98.6 3.3E-07 7.2E-12 73.9 8.9 113 272-391 5-128 (170)
77 cd03799 GT1_amsK_like This is 98.6 7.2E-05 1.6E-09 72.8 27.4 147 272-440 180-342 (355)
78 PF02350 Epimerase_2: UDP-N-ac 98.5 3.1E-06 6.6E-11 82.0 16.4 163 233-427 145-319 (346)
79 cd03811 GT1_WabH_like This fam 98.5 3.6E-05 7.7E-10 74.2 23.8 142 271-434 189-341 (353)
80 TIGR02468 sucrsPsyn_pln sucros 98.5 7.8E-05 1.7E-09 80.3 27.7 161 259-441 469-653 (1050)
81 cd03807 GT1_WbnK_like This fam 98.5 0.00013 2.9E-09 70.7 27.0 88 328-437 251-344 (365)
82 PRK09922 UDP-D-galactose:(gluc 98.4 6E-05 1.3E-09 73.9 22.2 147 272-441 181-342 (359)
83 TIGR03088 stp2 sugar transfera 98.4 0.00036 7.7E-09 68.8 27.3 91 329-439 256-352 (374)
84 cd04951 GT1_WbdM_like This fam 98.4 0.00023 5E-09 69.4 25.0 127 271-426 188-326 (360)
85 cd03812 GT1_CapH_like This fam 98.4 0.00037 8.1E-09 67.9 26.4 136 271-428 192-333 (358)
86 cd03802 GT1_AviGT4_like This f 98.3 0.00051 1.1E-08 66.3 25.7 128 273-426 173-308 (335)
87 cd04955 GT1_like_6 This family 98.3 0.001 2.2E-08 64.9 28.0 155 274-466 196-362 (363)
88 PRK01021 lpxB lipid-A-disaccha 98.3 0.0008 1.7E-08 68.4 26.8 188 233-443 381-589 (608)
89 TIGR02149 glgA_Coryne glycogen 98.3 0.0019 4.2E-08 63.8 29.2 148 272-439 202-366 (388)
90 TIGR03568 NeuC_NnaA UDP-N-acet 98.3 0.00019 4.1E-09 70.3 21.4 163 233-424 167-337 (365)
91 TIGR03087 stp1 sugar transfera 98.2 0.0009 1.9E-08 66.6 26.1 95 326-440 278-377 (397)
92 cd03809 GT1_mtfB_like This fam 98.1 0.00072 1.6E-08 65.8 22.9 145 272-438 196-349 (365)
93 PRK14089 ipid-A-disaccharide s 98.1 9.3E-05 2E-09 71.3 15.8 152 271-443 168-332 (347)
94 PLN00142 sucrose synthase 98.1 0.0025 5.4E-08 67.5 27.4 72 349-438 669-749 (815)
95 PF02684 LpxB: Lipid-A-disacch 98.1 0.0011 2.3E-08 64.5 23.0 202 233-458 153-367 (373)
96 PLN02275 transferase, transfer 98.1 0.01 2.2E-07 58.5 29.5 119 3-133 5-134 (371)
97 PLN02846 digalactosyldiacylgly 98.1 0.0065 1.4E-07 60.9 27.3 74 331-427 287-364 (462)
98 cd03806 GT1_ALG11_like This fa 97.9 0.011 2.4E-07 59.3 26.5 91 327-439 304-407 (419)
99 cd04946 GT1_AmsK_like This fam 97.9 0.0003 6.5E-09 70.2 14.4 164 272-463 231-406 (407)
100 COG0381 WecB UDP-N-acetylgluco 97.8 0.0068 1.5E-07 58.0 22.0 329 1-436 1-348 (383)
101 PRK15179 Vi polysaccharide bio 97.8 0.075 1.6E-06 56.3 31.4 95 327-439 573-673 (694)
102 PRK00654 glgA glycogen synthas 97.8 0.0098 2.1E-07 60.5 23.7 134 271-425 282-427 (466)
103 PF00534 Glycos_transf_1: Glyc 97.8 0.00024 5.2E-09 61.5 10.1 148 269-438 13-171 (172)
104 PRK15427 colanic acid biosynth 97.7 0.00087 1.9E-08 66.8 15.3 94 327-440 278-386 (406)
105 cd03804 GT1_wbaZ_like This fam 97.7 0.00023 5E-09 69.4 10.8 139 273-439 197-341 (351)
106 COG0763 LpxB Lipid A disacchar 97.7 0.014 3.1E-07 55.8 22.0 212 234-467 157-380 (381)
107 cd03792 GT1_Trehalose_phosphor 97.7 0.026 5.7E-07 55.5 25.4 90 328-439 252-351 (372)
108 PF13844 Glyco_transf_41: Glyc 97.7 0.00048 1E-08 68.3 12.6 152 269-436 283-441 (468)
109 PLN02949 transferase, transfer 97.7 0.057 1.2E-06 54.7 27.5 94 327-440 334-438 (463)
110 COG5017 Uncharacterized conser 97.6 0.00088 1.9E-08 53.4 10.0 107 273-396 2-122 (161)
111 PRK15484 lipopolysaccharide 1, 97.5 0.0049 1.1E-07 60.9 16.8 93 327-438 256-356 (380)
112 cd04949 GT1_gtfA_like This fam 97.5 0.0014 2.9E-08 64.6 12.0 100 327-443 260-363 (372)
113 cd04950 GT1_like_1 Glycosyltra 97.2 0.25 5.5E-06 48.6 28.4 125 272-427 206-341 (373)
114 TIGR02918 accessory Sec system 97.1 0.012 2.7E-07 60.1 14.1 150 272-442 320-483 (500)
115 PF13692 Glyco_trans_1_4: Glyc 97.0 0.0024 5.3E-08 52.6 7.3 125 272-426 3-135 (135)
116 cd03813 GT1_like_3 This family 97.0 0.015 3.2E-07 59.4 13.9 93 327-438 353-455 (475)
117 PLN02501 digalactosyldiacylgly 96.9 0.58 1.2E-05 49.0 24.5 76 330-428 603-683 (794)
118 PRK09814 beta-1,6-galactofuran 96.5 0.018 3.8E-07 55.8 10.3 112 327-465 206-332 (333)
119 PHA01633 putative glycosyl tra 96.4 0.12 2.6E-06 49.7 14.7 85 327-426 200-307 (335)
120 COG3914 Spy Predicted O-linked 95.9 0.15 3.2E-06 51.2 12.9 119 269-392 428-557 (620)
121 KOG4626 O-linked N-acetylgluco 95.9 0.053 1.2E-06 54.6 9.7 126 269-396 757-888 (966)
122 PRK10125 putative glycosyl tra 95.9 2.1 4.6E-05 42.6 28.7 105 272-397 242-355 (405)
123 PRK10017 colanic acid biosynth 95.6 0.38 8.2E-06 48.0 14.7 167 261-445 225-413 (426)
124 PRK14098 glycogen synthase; Pr 95.5 0.25 5.4E-06 50.5 13.5 130 272-424 308-449 (489)
125 cd03791 GT1_Glycogen_synthase_ 95.4 0.18 3.9E-06 51.4 12.1 133 272-425 297-441 (476)
126 TIGR02095 glgA glycogen/starch 95.1 0.32 6.9E-06 49.6 12.7 133 272-425 292-436 (473)
127 COG1817 Uncharacterized protei 95.0 3.2 6.9E-05 38.9 21.4 110 9-139 6-118 (346)
128 PRK15490 Vi polysaccharide bio 94.5 0.97 2.1E-05 46.3 13.9 64 327-397 454-522 (578)
129 PHA01630 putative group 1 glyc 94.0 1.2 2.6E-05 43.0 13.1 43 334-376 196-243 (331)
130 PF06258 Mito_fiss_Elm1: Mitoc 93.8 4.6 0.0001 38.5 16.4 40 336-376 220-259 (311)
131 PF13524 Glyco_trans_1_2: Glyc 93.3 0.54 1.2E-05 35.6 7.6 66 353-438 9-75 (92)
132 PF13477 Glyco_trans_4_2: Glyc 93.1 0.96 2.1E-05 37.1 9.6 97 4-131 1-105 (139)
133 PF06722 DUF1205: Protein of u 93.1 0.097 2.1E-06 40.2 3.1 53 257-309 27-84 (97)
134 PF13579 Glyco_trans_4_4: Glyc 92.9 0.16 3.5E-06 42.5 4.6 93 18-133 6-104 (160)
135 PLN02939 transferase, transfer 91.6 2.8 6.1E-05 45.7 12.7 93 328-435 837-945 (977)
136 PLN02316 synthase/transferase 90.5 7.3 0.00016 43.3 14.8 114 329-464 901-1029(1036)
137 TIGR02201 heptsyl_trn_III lipo 90.3 18 0.00039 35.0 19.0 99 269-372 180-285 (344)
138 cd01635 Glycosyltransferase_GT 89.2 1.3 2.7E-05 39.4 7.0 50 327-378 160-217 (229)
139 TIGR02400 trehalose_OtsA alpha 89.1 5.2 0.00011 40.5 11.8 105 332-467 340-455 (456)
140 PRK14099 glycogen synthase; Pr 89.0 3.6 7.9E-05 42.0 10.7 77 345-436 370-458 (485)
141 COG4370 Uncharacterized protei 88.0 1.3 2.9E-05 41.0 5.9 89 329-433 296-387 (412)
142 PRK10916 ADP-heptose:LPS hepto 88.0 27 0.00059 33.9 19.4 38 4-41 2-39 (348)
143 PF12000 Glyco_trans_4_3: Gkyc 86.8 10 0.00022 32.5 10.4 26 106-131 64-94 (171)
144 PF08660 Alg14: Oligosaccharid 86.8 5.8 0.00013 34.1 9.0 39 7-45 2-40 (170)
145 TIGR02919 accessory Sec system 86.6 13 0.00027 37.5 12.6 126 269-428 282-413 (438)
146 TIGR02193 heptsyl_trn_I lipopo 85.9 6.7 0.00014 37.5 10.1 142 263-424 172-319 (319)
147 PRK10422 lipopolysaccharide co 85.3 38 0.00083 32.9 19.7 41 2-42 5-45 (352)
148 PF13439 Glyco_transf_4: Glyco 85.0 13 0.00027 31.3 10.6 32 11-44 10-41 (177)
149 COG0859 RfaF ADP-heptose:LPS h 84.8 39 0.00084 32.6 17.2 41 3-43 2-42 (334)
150 cd03793 GT1_Glycogen_synthase_ 83.2 5.9 0.00013 40.8 8.5 83 337-427 467-553 (590)
151 TIGR03713 acc_sec_asp1 accesso 82.6 1.8 3.9E-05 44.5 4.7 92 328-444 409-507 (519)
152 cd03788 GT1_TPS Trehalose-6-Ph 82.4 7.1 0.00015 39.6 9.0 73 332-427 345-428 (460)
153 PF04413 Glycos_transf_N: 3-De 82.3 3.8 8.3E-05 35.8 6.1 93 10-133 28-126 (186)
154 cd02070 corrinoid_protein_B12- 81.2 12 0.00027 33.1 9.0 40 3-44 83-122 (201)
155 cd03789 GT1_LPS_heptosyltransf 79.9 9.4 0.0002 35.7 8.3 39 4-42 1-39 (279)
156 PF00731 AIRC: AIR carboxylase 79.8 25 0.00054 29.4 9.7 139 272-445 2-148 (150)
157 PF01975 SurE: Survival protei 79.4 2.2 4.7E-05 37.6 3.5 25 17-43 14-38 (196)
158 TIGR02195 heptsyl_trn_II lipop 79.2 62 0.0013 31.1 17.9 38 4-41 1-38 (334)
159 PRK12342 hypothetical protein; 79.2 16 0.00034 33.7 9.1 93 19-133 40-144 (254)
160 TIGR02370 pyl_corrinoid methyl 79.1 14 0.0003 32.6 8.6 41 3-45 85-125 (197)
161 PRK03359 putative electron tra 78.3 18 0.00039 33.4 9.3 94 19-133 41-147 (256)
162 TIGR02398 gluc_glyc_Psyn gluco 76.5 51 0.0011 33.7 12.7 108 330-467 364-481 (487)
163 PRK06718 precorrin-2 dehydroge 74.5 22 0.00048 31.5 8.6 149 270-448 11-167 (202)
164 PRK02261 methylaspartate mutas 73.0 8.5 0.00018 31.8 5.2 43 1-45 1-44 (137)
165 COG0438 RfaG Glycosyltransfera 71.8 85 0.0019 29.1 14.1 81 327-427 256-343 (381)
166 cd07039 TPP_PYR_POX Pyrimidine 71.6 40 0.00088 28.7 9.3 27 347-373 64-96 (164)
167 PRK02797 4-alpha-L-fucosyltran 71.1 43 0.00092 31.7 9.7 135 272-423 146-291 (322)
168 PF04464 Glyphos_transf: CDP-G 71.0 5 0.00011 39.3 4.1 115 328-462 252-367 (369)
169 cd07038 TPP_PYR_PDC_IPDC_like 67.7 29 0.00062 29.5 7.5 28 347-374 60-93 (162)
170 TIGR01470 cysG_Nterm siroheme 67.5 72 0.0016 28.3 10.3 150 271-448 11-167 (205)
171 PF01075 Glyco_transf_9: Glyco 67.3 20 0.00042 32.7 7.0 99 269-372 104-208 (247)
172 PRK08057 cobalt-precorrin-6x r 67.2 39 0.00085 31.0 8.7 35 1-42 1-35 (248)
173 cd02067 B12-binding B12 bindin 66.7 10 0.00022 30.2 4.4 37 4-42 1-37 (119)
174 PLN03063 alpha,alpha-trehalose 66.2 33 0.00071 37.6 9.3 71 334-426 362-443 (797)
175 PRK10964 ADP-heptose:LPS hepto 63.5 23 0.0005 33.9 6.9 135 272-425 180-321 (322)
176 PF05159 Capsule_synth: Capsul 63.3 43 0.00092 31.1 8.5 43 329-374 184-226 (269)
177 COG1618 Predicted nucleotide k 62.0 86 0.0019 26.7 8.8 58 1-72 4-61 (179)
178 PF07429 Glyco_transf_56: 4-al 61.5 1E+02 0.0022 29.8 10.3 137 272-425 185-332 (360)
179 PF07801 DUF1647: Protein of u 61.2 23 0.00049 29.3 5.3 67 3-76 60-126 (142)
180 TIGR00725 conserved hypothetic 60.5 62 0.0013 27.4 8.1 99 257-374 20-123 (159)
181 PLN02470 acetolactate synthase 59.5 26 0.00056 36.9 6.9 91 276-373 2-109 (585)
182 PRK01231 ppnK inorganic polyph 59.0 60 0.0013 30.7 8.6 52 348-427 64-119 (295)
183 cd02069 methionine_synthase_B1 58.7 80 0.0017 28.3 8.9 41 3-45 89-129 (213)
184 PRK02155 ppnK NAD(+)/NADH kina 57.5 77 0.0017 29.9 9.0 26 348-373 65-94 (291)
185 TIGR00715 precor6x_red precorr 57.3 64 0.0014 29.8 8.3 32 4-42 2-33 (256)
186 PF02441 Flavoprotein: Flavopr 56.6 21 0.00045 29.0 4.5 36 3-41 1-36 (129)
187 COG0801 FolK 7,8-dihydro-6-hyd 55.7 26 0.00056 29.6 4.9 37 272-308 3-39 (160)
188 PRK07206 hypothetical protein; 55.0 39 0.00084 33.7 7.1 35 1-42 1-35 (416)
189 PF12146 Hydrolase_4: Putative 54.7 25 0.00054 25.8 4.2 33 4-38 17-49 (79)
190 COG2086 FixA Electron transfer 53.9 75 0.0016 29.4 8.0 93 20-133 43-146 (260)
191 PRK04965 NADH:flavorubredoxin 53.7 14 0.0003 36.4 3.6 37 1-42 1-37 (377)
192 PRK06988 putative formyltransf 53.4 42 0.00092 32.0 6.7 35 1-42 1-35 (312)
193 COG0496 SurE Predicted acid ph 53.0 34 0.00073 31.3 5.5 23 18-43 15-37 (252)
194 PF02310 B12-binding: B12 bind 51.9 32 0.0007 27.2 4.9 35 4-40 2-36 (121)
195 COG0041 PurE Phosphoribosylcar 51.7 1.4E+02 0.0031 24.9 11.8 143 272-448 4-153 (162)
196 PRK07710 acetolactate synthase 50.4 46 0.00099 34.9 7.0 27 347-373 79-111 (571)
197 PRK08322 acetolactate synthase 50.0 61 0.0013 33.7 7.8 28 346-373 63-96 (547)
198 PRK14501 putative bifunctional 50.0 46 0.001 36.1 7.1 78 331-427 345-429 (726)
199 cd01840 SGNH_hydrolase_yrhL_li 49.6 40 0.00088 28.0 5.3 37 270-307 51-87 (150)
200 cd03791 GT1_Glycogen_synthase_ 49.4 1.1E+02 0.0025 30.9 9.6 23 19-43 22-44 (476)
201 TIGR02015 BchY chlorophyllide 49.2 99 0.0022 31.0 8.8 25 108-132 355-380 (422)
202 TIGR01162 purE phosphoribosyla 49.0 1.6E+02 0.0035 24.8 10.6 140 275-448 3-149 (156)
203 PRK05920 aromatic acid decarbo 48.6 25 0.00054 31.2 4.0 39 1-42 2-40 (204)
204 PF07355 GRDB: Glycine/sarcosi 48.5 21 0.00046 34.2 3.7 42 88-133 64-119 (349)
205 PF02951 GSH-S_N: Prokaryotic 48.3 29 0.00062 27.8 3.9 36 4-41 2-40 (119)
206 PRK08229 2-dehydropantoate 2-r 48.1 17 0.00037 35.1 3.2 33 1-40 1-33 (341)
207 PLN02948 phosphoribosylaminoim 48.0 2.9E+02 0.0063 29.0 12.3 145 270-448 410-561 (577)
208 PRK03708 ppnK inorganic polyph 47.5 93 0.002 29.1 7.8 28 347-374 58-88 (277)
209 COG3660 Predicted nucleoside-d 47.4 2.4E+02 0.0051 26.2 18.4 92 272-372 164-271 (329)
210 cd07037 TPP_PYR_MenD Pyrimidin 47.1 48 0.001 28.2 5.4 26 349-374 63-94 (162)
211 PF05225 HTH_psq: helix-turn-h 47.0 38 0.00082 21.7 3.6 27 412-440 1-27 (45)
212 TIGR00173 menD 2-succinyl-5-en 46.2 1.3E+02 0.0029 30.1 9.3 26 347-372 64-95 (432)
213 cd07025 Peptidase_S66 LD-Carbo 44.8 49 0.0011 31.1 5.6 77 281-376 44-122 (282)
214 PRK13054 lipid kinase; Reviewe 44.8 2.3E+02 0.0051 26.7 10.3 40 1-42 2-41 (300)
215 COG2185 Sbm Methylmalonyl-CoA 44.7 34 0.00073 28.3 3.8 37 2-40 12-48 (143)
216 PF05693 Glycogen_syn: Glycoge 44.0 48 0.001 34.5 5.6 95 336-442 461-565 (633)
217 PF04127 DFP: DNA / pantothena 43.8 38 0.00082 29.6 4.3 29 9-41 24-52 (185)
218 PF02826 2-Hacid_dh_C: D-isome 43.2 1E+02 0.0022 26.5 7.0 104 271-422 38-143 (178)
219 PRK14477 bifunctional nitrogen 43.0 1.2E+02 0.0025 34.0 8.9 34 95-132 380-414 (917)
220 PRK05647 purN phosphoribosylgl 42.8 2.4E+02 0.0052 24.9 10.2 90 2-118 1-91 (200)
221 PF07015 VirC1: VirC1 protein; 42.8 1.2E+02 0.0027 27.4 7.4 43 3-47 2-45 (231)
222 PRK02231 ppnK inorganic polyph 42.3 1.7E+02 0.0037 27.3 8.6 36 337-374 35-74 (272)
223 PRK06276 acetolactate synthase 41.7 1.1E+02 0.0023 32.3 8.1 27 347-373 64-96 (586)
224 cd02071 MM_CoA_mut_B12_BD meth 41.7 52 0.0011 26.3 4.6 40 4-45 1-40 (122)
225 PRK04539 ppnK inorganic polyph 41.4 67 0.0014 30.4 5.9 53 347-427 69-125 (296)
226 PLN02929 NADH kinase 41.1 49 0.0011 31.3 4.9 64 348-427 66-138 (301)
227 TIGR01286 nifK nitrogenase mol 41.1 1.8E+02 0.004 30.0 9.4 33 95-131 428-461 (515)
228 PRK03372 ppnK inorganic polyph 41.0 64 0.0014 30.7 5.7 53 347-427 73-129 (306)
229 TIGR01917 gly_red_sel_B glycin 40.7 33 0.00071 33.8 3.7 45 85-133 57-115 (431)
230 TIGR01918 various_sel_PB selen 40.5 34 0.00073 33.8 3.7 45 350-396 348-394 (431)
231 COG0503 Apt Adenine/guanine ph 39.9 51 0.0011 28.6 4.5 24 108-131 53-82 (179)
232 PRK01911 ppnK inorganic polyph 39.9 69 0.0015 30.2 5.7 52 348-427 66-121 (292)
233 PRK12446 undecaprenyldiphospho 39.5 44 0.00095 32.6 4.5 98 272-372 4-120 (352)
234 PRK01175 phosphoribosylformylg 39.2 2.8E+02 0.0061 25.7 9.5 36 1-41 2-37 (261)
235 PRK13010 purU formyltetrahydro 39.2 2.6E+02 0.0056 26.4 9.4 113 290-439 160-274 (289)
236 cd01425 RPS2 Ribosomal protein 39.0 80 0.0017 27.7 5.7 29 107-135 126-160 (193)
237 PRK04885 ppnK inorganic polyph 39.0 60 0.0013 30.2 5.1 28 347-374 36-69 (265)
238 cd07035 TPP_PYR_POX_like Pyrim 38.9 2.2E+02 0.0049 23.5 11.1 26 349-374 62-93 (155)
239 PF10649 DUF2478: Protein of u 38.5 2.5E+02 0.0053 23.8 11.1 34 6-41 2-36 (159)
240 PRK13011 formyltetrahydrofolat 38.4 3E+02 0.0064 25.9 9.7 114 290-440 156-271 (286)
241 TIGR00655 PurU formyltetrahydr 37.5 2.8E+02 0.006 26.1 9.3 115 289-440 150-266 (280)
242 PTZ00445 p36-lilke protein; Pr 37.5 78 0.0017 28.2 5.2 28 14-43 74-102 (219)
243 cd01635 Glycosyltransferase_GT 37.2 47 0.001 29.0 4.1 26 12-39 12-37 (229)
244 cd07062 Peptidase_S66_mccF_lik 37.0 67 0.0014 30.6 5.2 75 282-375 49-125 (308)
245 PRK14077 pnk inorganic polypho 36.7 80 0.0017 29.8 5.6 27 348-374 66-96 (287)
246 PRK12475 thiamine/molybdopteri 36.5 1.3E+02 0.0028 29.1 7.2 30 3-39 25-55 (338)
247 PRK09219 xanthine phosphoribos 36.1 51 0.0011 28.8 4.0 26 108-133 50-81 (189)
248 PF02374 ArsA_ATPase: Anion-tr 36.1 55 0.0012 31.1 4.5 39 5-45 3-42 (305)
249 PRK14075 pnk inorganic polypho 36.0 80 0.0017 29.2 5.4 52 348-427 43-95 (256)
250 KOG2941 Beta-1,4-mannosyltrans 35.9 4.2E+02 0.0091 25.8 28.3 144 269-439 253-423 (444)
251 COG0299 PurN Folate-dependent 35.9 1.1E+02 0.0024 26.9 5.7 120 284-441 63-186 (200)
252 PRK04940 hypothetical protein; 35.8 60 0.0013 28.1 4.2 27 108-134 60-91 (180)
253 PRK08199 thiamine pyrophosphat 35.6 1.4E+02 0.003 31.2 7.8 27 347-373 72-104 (557)
254 cd01974 Nitrogenase_MoFe_beta 35.1 53 0.0012 33.0 4.5 25 108-132 377-402 (435)
255 PRK02649 ppnK inorganic polyph 35.0 76 0.0017 30.2 5.2 28 347-374 69-100 (305)
256 COG0052 RpsB Ribosomal protein 35.0 50 0.0011 30.0 3.7 26 108-133 156-187 (252)
257 PRK11269 glyoxylate carboligas 34.9 1.1E+02 0.0023 32.4 6.8 27 347-373 69-101 (591)
258 cd01981 Pchlide_reductase_B Pc 34.7 53 0.0011 33.0 4.4 34 96-133 362-396 (430)
259 PRK07574 formate dehydrogenase 34.6 3.2E+02 0.0069 27.0 9.6 68 272-360 195-262 (385)
260 KOG3062 RNA polymerase II elon 34.6 87 0.0019 28.2 5.0 36 3-38 2-37 (281)
261 TIGR00460 fmt methionyl-tRNA f 34.5 1.5E+02 0.0033 28.2 7.3 32 4-42 2-33 (313)
262 PRK10637 cysG siroheme synthas 34.0 2.5E+02 0.0055 28.5 9.1 153 270-448 13-170 (457)
263 PRK14092 2-amino-4-hydroxy-6-h 33.9 80 0.0017 26.9 4.6 30 270-299 7-36 (163)
264 PF06506 PrpR_N: Propionate ca 33.9 52 0.0011 28.3 3.7 44 93-137 111-155 (176)
265 PF03808 Glyco_tran_WecB: Glyc 33.7 1.6E+02 0.0034 25.2 6.6 93 19-137 37-137 (172)
266 cd03789 GT1_LPS_heptosyltransf 33.5 56 0.0012 30.4 4.2 94 272-372 123-223 (279)
267 cd01976 Nitrogenase_MoFe_alpha 33.4 53 0.0011 32.9 4.1 34 95-132 360-394 (421)
268 cd03466 Nitrogenase_NifN_2 Nit 33.2 59 0.0013 32.7 4.4 33 95-131 363-396 (429)
269 PF00862 Sucrose_synth: Sucros 33.1 82 0.0018 32.0 5.1 115 12-133 295-432 (550)
270 TIGR01284 alt_nitrog_alph nitr 33.0 43 0.00093 34.0 3.4 32 96-131 387-419 (457)
271 PRK07313 phosphopantothenoylcy 33.0 61 0.0013 28.2 3.9 37 3-42 2-38 (182)
272 COG0240 GpsA Glycerol-3-phosph 33.0 2.4E+02 0.0051 27.1 8.0 32 3-41 2-33 (329)
273 PF10087 DUF2325: Uncharacteri 32.9 47 0.001 25.3 2.9 32 108-139 48-89 (97)
274 TIGR00661 MJ1255 conserved hyp 32.8 1.5E+02 0.0032 28.3 7.0 32 341-372 88-119 (321)
275 TIGR01862 N2-ase-Ialpha nitrog 32.8 47 0.001 33.5 3.6 24 108-131 387-411 (443)
276 PRK08155 acetolactate synthase 32.4 92 0.002 32.6 5.9 27 347-373 77-109 (564)
277 PRK08266 hypothetical protein; 32.4 85 0.0018 32.6 5.6 26 348-373 70-101 (542)
278 TIGR01285 nifN nitrogenase mol 32.3 52 0.0011 33.1 3.8 33 95-131 364-397 (432)
279 PRK03378 ppnK inorganic polyph 32.0 1E+02 0.0022 29.1 5.5 53 347-427 64-120 (292)
280 PRK10427 putative PTS system f 31.7 1E+02 0.0023 24.4 4.7 39 1-41 1-42 (114)
281 TIGR02852 spore_dpaB dipicolin 31.6 65 0.0014 28.1 3.8 37 4-42 2-38 (187)
282 PRK03501 ppnK inorganic polyph 31.5 1.1E+02 0.0024 28.4 5.6 27 348-374 41-72 (264)
283 PRK07053 glutamine amidotransf 31.3 4E+02 0.0087 24.1 10.8 105 1-129 1-105 (234)
284 COG2327 WcaK Polysaccharide py 31.1 2.1E+02 0.0046 28.1 7.5 71 339-427 280-351 (385)
285 TIGR02095 glgA glycogen/starch 30.7 83 0.0018 32.0 5.1 38 4-43 2-45 (473)
286 COG2099 CobK Precorrin-6x redu 30.7 55 0.0012 29.9 3.3 31 97-131 189-228 (257)
287 PRK05595 replicative DNA helic 30.6 1.1E+02 0.0023 31.0 5.8 38 5-44 204-242 (444)
288 PRK08978 acetolactate synthase 30.5 88 0.0019 32.6 5.3 26 348-373 65-96 (548)
289 PRK07525 sulfoacetaldehyde ace 30.3 86 0.0019 33.0 5.2 28 346-373 68-101 (588)
290 CHL00076 chlB photochlorophyll 30.2 66 0.0014 33.2 4.2 34 95-132 365-399 (513)
291 KOG0081 GTPase Rab27, small G 30.0 84 0.0018 26.4 3.9 40 94-133 107-163 (219)
292 COG1737 RpiR Transcriptional r 29.8 1.7E+02 0.0037 27.4 6.7 89 260-378 123-216 (281)
293 PRK05858 hypothetical protein; 29.7 2.2E+02 0.0047 29.6 8.1 25 349-373 70-100 (542)
294 PRK08617 acetolactate synthase 29.7 98 0.0021 32.2 5.5 27 347-373 68-100 (552)
295 COG0297 GlgA Glycogen synthase 29.5 1.9E+02 0.0041 29.6 7.3 164 272-465 294-474 (487)
296 PRK08760 replicative DNA helic 29.5 91 0.002 31.8 5.0 39 5-45 232-271 (476)
297 PRK08305 spoVFB dipicolinate s 29.4 76 0.0016 27.9 3.9 38 3-42 6-43 (196)
298 PF02776 TPP_enzyme_N: Thiamin 29.3 1.3E+02 0.0028 25.6 5.4 27 348-374 66-98 (172)
299 TIGR00147 lipid kinase, YegS/R 28.8 2.4E+02 0.0051 26.5 7.6 27 348-374 59-91 (293)
300 PF01210 NAD_Gly3P_dh_N: NAD-d 28.8 51 0.0011 27.7 2.7 30 5-41 2-31 (157)
301 cd01965 Nitrogenase_MoFe_beta_ 28.7 74 0.0016 32.0 4.3 24 108-131 371-395 (428)
302 PRK06603 enoyl-(acyl carrier p 28.6 93 0.002 28.5 4.7 36 1-39 6-41 (260)
303 cd06210 MMO_FAD_NAD_binding Me 28.6 1.3E+02 0.0028 27.0 5.6 63 4-69 110-172 (236)
304 PRK02910 light-independent pro 28.5 74 0.0016 32.9 4.3 34 95-132 353-387 (519)
305 PLN03139 formate dehydrogenase 28.4 3.4E+02 0.0075 26.8 8.7 67 271-358 201-267 (386)
306 TIGR02195 heptsyl_trn_II lipop 28.1 5.3E+02 0.011 24.5 10.1 26 108-133 251-278 (334)
307 cd01977 Nitrogenase_VFe_alpha 27.8 60 0.0013 32.5 3.4 24 108-131 358-382 (415)
308 KOG0832 Mitochondrial/chloropl 27.7 41 0.00089 30.1 1.9 30 12-43 90-119 (251)
309 TIGR00118 acolac_lg acetolacta 27.5 2.1E+02 0.0046 29.8 7.5 27 347-373 65-97 (558)
310 KOG0853 Glycosyltransferase [C 27.4 66 0.0014 32.7 3.5 66 353-435 377-443 (495)
311 KOG0069 Glyoxylate/hydroxypyru 27.3 4.3E+02 0.0093 25.5 8.8 104 270-421 163-268 (336)
312 TIGR01860 VNFD nitrogenase van 27.1 68 0.0015 32.6 3.7 23 108-130 397-420 (461)
313 cd02034 CooC The accessory pro 26.9 1.5E+02 0.0032 23.5 4.8 37 4-42 1-37 (116)
314 TIGR01278 DPOR_BchB light-inde 26.9 73 0.0016 32.9 3.9 26 108-133 364-390 (511)
315 PF06180 CbiK: Cobalt chelatas 26.9 93 0.002 28.9 4.2 38 272-309 3-43 (262)
316 PF05728 UPF0227: Uncharacteri 26.9 93 0.002 27.2 4.0 41 94-136 47-92 (187)
317 PRK14478 nitrogenase molybdenu 26.9 72 0.0016 32.5 3.8 31 96-130 385-416 (475)
318 PRK12311 rpsB 30S ribosomal pr 26.8 53 0.0011 31.5 2.6 27 107-133 151-183 (326)
319 PF06925 MGDG_synth: Monogalac 26.8 1.6E+02 0.0034 25.0 5.4 24 15-38 1-25 (169)
320 PRK06914 short chain dehydroge 26.7 1E+02 0.0023 28.4 4.7 35 1-40 1-35 (280)
321 COG4088 Predicted nucleotide k 26.7 86 0.0019 28.0 3.6 35 3-39 2-36 (261)
322 PRK07449 2-succinyl-5-enolpyru 26.7 1.6E+02 0.0035 30.8 6.5 25 349-373 75-105 (568)
323 PLN02935 Bifunctional NADH kin 26.5 1.4E+02 0.003 30.5 5.6 54 346-427 262-319 (508)
324 COG4126 Hydantoin racemase [Am 26.5 4.5E+02 0.0098 23.6 8.0 104 11-130 76-202 (230)
325 COG1052 LdhA Lactate dehydroge 26.5 2.8E+02 0.0062 26.6 7.5 103 272-422 149-252 (324)
326 COG3349 Uncharacterized conser 26.3 65 0.0014 32.6 3.3 29 3-38 1-29 (485)
327 PRK15469 ghrA bifunctional gly 26.3 5.5E+02 0.012 24.5 9.5 66 271-359 138-203 (312)
328 cd01980 Chlide_reductase_Y Chl 26.3 83 0.0018 31.5 4.1 25 108-132 350-375 (416)
329 COG0003 ArsA Predicted ATPase 26.2 1.4E+02 0.003 28.7 5.3 42 3-46 2-44 (322)
330 PLN02293 adenine phosphoribosy 26.1 1.1E+02 0.0025 26.6 4.4 24 108-131 62-91 (187)
331 PRK06487 glycerate dehydrogena 26.0 2.9E+02 0.0063 26.4 7.6 60 270-357 149-208 (317)
332 PRK13982 bifunctional SbtC-lik 25.9 1.5E+02 0.0033 30.1 5.8 37 3-41 257-305 (475)
333 PRK08410 2-hydroxyacid dehydro 25.7 2.9E+02 0.0063 26.3 7.5 99 270-421 146-247 (311)
334 TIGR02201 heptsyl_trn_III lipo 25.6 4.5E+02 0.0098 25.2 9.1 26 108-133 260-287 (344)
335 PRK06457 pyruvate dehydrogenas 25.5 1.2E+02 0.0027 31.5 5.3 27 347-373 65-97 (549)
336 COG2230 Cfa Cyclopropane fatty 25.4 75 0.0016 29.8 3.3 91 258-392 29-121 (283)
337 PF03446 NAD_binding_2: NAD bi 25.2 62 0.0014 27.4 2.6 30 3-39 2-31 (163)
338 PRK10964 ADP-heptose:LPS hepto 25.1 1.1E+02 0.0023 29.3 4.5 38 4-41 2-39 (322)
339 PRK06180 short chain dehydroge 25.1 1.1E+02 0.0025 28.2 4.6 33 3-40 4-36 (277)
340 cd01832 SGNH_hydrolase_like_1 25.1 1.7E+02 0.0038 24.8 5.5 36 272-307 70-113 (185)
341 COG3265 GntK Gluconate kinase 25.0 1.2E+02 0.0025 25.5 3.9 62 351-425 3-65 (161)
342 PRK09177 xanthine-guanine phos 25.0 1.4E+02 0.0031 25.1 4.7 22 108-129 31-58 (156)
343 PRK14076 pnk inorganic polypho 24.9 1.3E+02 0.0028 31.6 5.3 53 347-427 349-405 (569)
344 PRK10422 lipopolysaccharide co 24.9 2.3E+02 0.0049 27.4 6.8 26 108-133 262-289 (352)
345 PLN03064 alpha,alpha-trehalose 24.7 1E+03 0.022 26.8 12.2 72 332-425 444-526 (934)
346 PRK06048 acetolactate synthase 24.7 1.3E+02 0.0028 31.5 5.3 26 348-373 72-103 (561)
347 PRK06882 acetolactate synthase 24.7 1.3E+02 0.0028 31.6 5.3 27 347-373 68-100 (574)
348 COG1484 DnaC DNA replication p 24.5 1.2E+02 0.0026 28.0 4.5 36 4-41 107-142 (254)
349 COG2210 Peroxiredoxin family p 24.5 1.4E+02 0.003 24.5 4.2 31 8-40 9-39 (137)
350 TIGR01744 XPRTase xanthine pho 24.5 1.1E+02 0.0023 26.9 3.9 26 108-133 50-81 (191)
351 PRK06456 acetolactate synthase 24.4 1.5E+02 0.0032 31.2 5.7 27 347-373 69-101 (572)
352 PRK07524 hypothetical protein; 24.3 1.5E+02 0.0032 30.8 5.6 26 348-373 66-97 (535)
353 TIGR01498 folK 2-amino-4-hydro 24.3 74 0.0016 25.8 2.7 28 273-300 1-28 (127)
354 KOG1344 Predicted histone deac 24.2 1.6E+02 0.0035 26.5 4.8 19 119-137 285-303 (324)
355 PF00282 Pyridoxal_deC: Pyrido 24.0 1.5E+02 0.0033 29.1 5.4 71 347-426 104-191 (373)
356 cd00861 ProRS_anticodon_short 24.0 1.4E+02 0.0031 22.1 4.2 33 4-38 3-37 (94)
357 cd01452 VWA_26S_proteasome_sub 23.9 4.5E+02 0.0097 23.0 7.7 64 5-72 111-175 (187)
358 PRK05708 2-dehydropantoate 2-r 23.8 87 0.0019 29.7 3.6 33 1-40 1-33 (305)
359 TIGR02193 heptsyl_trn_I lipopo 23.8 90 0.0019 29.7 3.7 39 4-42 1-39 (319)
360 PRK06029 3-octaprenyl-4-hydrox 23.8 1.2E+02 0.0026 26.5 4.0 38 2-42 1-39 (185)
361 PRK06505 enoyl-(acyl carrier p 23.8 1.3E+02 0.0028 27.9 4.7 35 1-38 5-39 (271)
362 PRK13196 pyrrolidone-carboxyla 23.7 2.9E+02 0.0064 24.6 6.6 26 3-28 2-29 (211)
363 PF13499 EF-hand_7: EF-hand do 23.7 91 0.002 21.3 2.8 54 406-465 12-65 (66)
364 PRK05562 precorrin-2 dehydroge 23.7 5.5E+02 0.012 23.2 8.7 142 271-445 27-179 (223)
365 PRK10037 cell division protein 23.6 1.3E+02 0.0029 27.4 4.7 39 1-42 1-40 (250)
366 PRK06725 acetolactate synthase 23.6 1.4E+02 0.003 31.3 5.3 27 347-373 78-110 (570)
367 PRK13195 pyrrolidone-carboxyla 23.5 2.3E+02 0.0049 25.6 5.9 27 2-28 1-29 (222)
368 TIGR02418 acolac_catab acetola 23.5 1.5E+02 0.0032 30.8 5.5 28 347-374 62-95 (539)
369 TIGR01282 nifD nitrogenase mol 23.3 66 0.0014 32.7 2.7 33 95-131 395-428 (466)
370 TIGR01283 nifE nitrogenase mol 23.2 1E+02 0.0022 31.3 4.0 33 95-131 386-419 (456)
371 PRK08558 adenine phosphoribosy 23.2 1.1E+02 0.0023 28.0 3.8 25 107-131 110-140 (238)
372 COG0665 DadA Glycine/D-amino a 23.1 90 0.0019 30.5 3.7 32 1-39 3-34 (387)
373 PF09547 Spore_IV_A: Stage IV 23.0 2.7E+02 0.006 27.9 6.6 75 341-425 141-234 (492)
374 PRK01372 ddl D-alanine--D-alan 23.0 1.3E+02 0.0028 28.4 4.6 38 1-40 3-44 (304)
375 PRK06732 phosphopantothenate-- 23.0 1.1E+02 0.0023 27.8 3.8 19 19-39 29-47 (229)
376 COG2085 Predicted dinucleotide 22.9 1.3E+02 0.0029 26.7 4.2 34 4-44 3-36 (211)
377 cd01968 Nitrogenase_NifE_I Nit 22.9 94 0.002 31.0 3.8 32 95-130 347-379 (410)
378 TIGR03457 sulphoacet_xsc sulfo 22.7 1.4E+02 0.0031 31.3 5.2 27 347-373 65-97 (579)
379 cd06187 O2ase_reductase_like T 22.7 2.3E+02 0.0049 25.1 5.9 41 3-45 99-139 (224)
380 TIGR00715 precor6x_red precorr 22.6 83 0.0018 29.1 3.0 31 97-131 190-229 (256)
381 cd03412 CbiK_N Anaerobic cobal 22.5 1.4E+02 0.0031 24.0 4.1 37 272-308 3-41 (127)
382 PRK01185 ppnK inorganic polyph 22.4 1.7E+02 0.0036 27.3 5.0 53 347-427 53-106 (271)
383 TIGR02990 ectoine_eutA ectoine 22.4 2.7E+02 0.0058 25.4 6.2 102 16-133 105-214 (239)
384 PRK08527 acetolactate synthase 22.3 1.5E+02 0.0032 31.0 5.3 27 347-373 67-99 (563)
385 PRK15438 erythronate-4-phospha 22.2 4.8E+02 0.01 25.8 8.3 60 271-356 118-177 (378)
386 PRK13768 GTPase; Provisional 22.2 1.6E+02 0.0035 27.0 4.9 40 1-42 1-40 (253)
387 cd06211 phenol_2-monooxygenase 22.1 2.2E+02 0.0047 25.7 5.8 62 4-68 111-172 (238)
388 PRK08057 cobalt-precorrin-6x r 22.1 1.2E+02 0.0026 27.9 4.0 31 97-131 183-221 (248)
389 cd02065 B12-binding_like B12 b 22.1 1.7E+02 0.0038 22.9 4.6 35 5-41 2-36 (125)
390 PRK13512 coenzyme A disulfide 22.0 86 0.0019 31.5 3.3 35 2-41 1-35 (438)
391 cd01973 Nitrogenase_VFe_beta_l 22.0 1.3E+02 0.0029 30.4 4.6 24 108-131 381-405 (454)
392 TIGR01743 purR_Bsub pur operon 21.9 1.1E+02 0.0024 28.4 3.7 27 107-133 127-159 (268)
393 TIGR01283 nifE nitrogenase mol 21.9 7.3E+02 0.016 25.1 10.0 26 350-375 248-277 (456)
394 PRK06932 glycerate dehydrogena 21.9 3.9E+02 0.0084 25.5 7.6 99 271-421 149-248 (314)
395 PRK11914 diacylglycerol kinase 21.8 2.6E+02 0.0056 26.4 6.4 26 349-374 67-96 (306)
396 COG2861 Uncharacterized protei 21.8 4.4E+02 0.0095 24.1 7.1 44 85-131 129-179 (250)
397 CHL00072 chlL photochlorophyll 21.8 1.9E+02 0.0041 27.2 5.4 39 1-43 1-39 (290)
398 PF02585 PIG-L: GlcNAc-PI de-N 21.8 4.1E+02 0.0088 21.0 9.0 21 90-114 86-106 (128)
399 cd01967 Nitrogenase_MoFe_alpha 21.8 1E+02 0.0022 30.6 3.8 33 95-131 346-379 (406)
400 COG1422 Predicted membrane pro 21.7 2.8E+02 0.0062 24.4 5.8 34 415-448 59-93 (201)
401 TIGR02329 propionate_PrpR prop 21.6 1.7E+02 0.0036 30.4 5.3 41 93-134 131-172 (526)
402 PRK02399 hypothetical protein; 21.5 7.3E+02 0.016 24.7 9.2 120 1-136 2-132 (406)
403 TIGR00730 conserved hypothetic 21.5 4.6E+02 0.01 22.6 7.3 36 338-373 89-133 (178)
404 PRK02645 ppnK inorganic polyph 21.4 2.9E+02 0.0062 26.3 6.5 27 348-374 59-89 (305)
405 PRK15062 hydrogenase isoenzyme 21.4 7.7E+02 0.017 24.1 10.0 56 92-149 171-236 (364)
406 cd01828 sialate_O-acetylestera 21.4 2.1E+02 0.0047 23.8 5.3 47 260-308 41-96 (169)
407 COG0223 Fmt Methionyl-tRNA for 21.4 1.3E+02 0.0027 28.7 4.0 36 3-45 2-37 (307)
408 PRK09213 pur operon repressor; 21.3 1.2E+02 0.0026 28.2 3.8 27 107-133 129-161 (271)
409 PRK14571 D-alanyl-alanine synt 21.3 4E+02 0.0086 25.0 7.6 34 273-306 3-39 (299)
410 COG0162 TyrS Tyrosyl-tRNA synt 21.2 97 0.0021 30.7 3.3 28 12-42 47-74 (401)
411 PF00175 NAD_binding_1: Oxidor 21.2 1.2E+02 0.0027 23.1 3.4 53 16-69 8-61 (109)
412 TIGR02720 pyruv_oxi_spxB pyruv 21.1 1.9E+02 0.0041 30.4 5.7 27 347-373 64-96 (575)
413 COG2179 Predicted hydrolase of 21.1 1.3E+02 0.0028 25.7 3.5 80 256-349 47-132 (175)
414 PRK06114 short chain dehydroge 21.0 1.5E+02 0.0033 26.8 4.6 34 2-40 7-40 (254)
415 COG1090 Predicted nucleoside-d 20.9 7.1E+02 0.015 23.4 8.9 27 19-47 11-37 (297)
416 cd01715 ETF_alpha The electron 20.9 1.4E+02 0.0031 25.3 4.0 35 95-133 74-115 (168)
417 PRK07609 CDP-6-deoxy-delta-3,4 20.8 2E+02 0.0043 27.7 5.5 63 4-69 206-268 (339)
418 TIGR01012 Sa_S2_E_A ribosomal 20.8 97 0.0021 27.3 2.9 26 108-133 108-139 (196)
419 TIGR01501 MthylAspMutase methy 20.8 1.7E+02 0.0037 24.0 4.2 42 2-45 1-42 (134)
420 TIGR02931 anfK_nitrog Fe-only 20.8 1.3E+02 0.0029 30.5 4.4 24 108-131 388-412 (461)
421 TIGR02932 vnfK_nitrog V-contai 20.7 1.4E+02 0.003 30.4 4.4 24 108-131 384-408 (457)
422 PRK13185 chlL protochlorophyll 20.6 2.1E+02 0.0046 26.3 5.5 40 1-42 1-40 (270)
423 cd00757 ThiF_MoeB_HesA_family 20.5 4.2E+02 0.0091 23.8 7.2 31 2-38 21-51 (228)
424 TIGR03325 BphB_TodD cis-2,3-di 20.4 1.6E+02 0.0035 26.8 4.6 32 3-39 5-36 (262)
425 PRK10818 cell division inhibit 20.4 1.7E+02 0.0038 26.9 4.8 40 1-42 1-41 (270)
426 PF08030 NAD_binding_6: Ferric 20.3 55 0.0012 27.2 1.3 38 272-309 4-46 (156)
427 PRK12744 short chain dehydroge 20.3 3E+02 0.0065 24.9 6.4 32 4-40 9-40 (257)
428 cd03784 GT1_Gtf_like This fami 20.2 4.2E+02 0.009 25.9 7.8 36 272-309 3-38 (401)
429 COG0859 RfaF ADP-heptose:LPS h 20.2 3.5E+02 0.0076 26.0 7.0 96 3-133 176-278 (334)
430 PF06491 Disulph_isomer: Disul 20.2 92 0.002 25.2 2.4 51 12-64 49-99 (136)
431 PRK14099 glycogen synthase; Pr 20.1 1.6E+02 0.0035 30.1 4.8 38 3-42 4-47 (485)
432 PF13450 NAD_binding_8: NAD(P) 20.1 1.2E+02 0.0027 21.2 2.9 18 19-38 8-25 (68)
No 1
>PLN00164 glucosyltransferase; Provisional
Probab=100.00 E-value=2.6e-73 Score=567.69 Aligned_cols=451 Identities=40% Similarity=0.704 Sum_probs=353.4
Q ss_pred cceEEEecCCCccCHHHHHHHHHHHHhCCCC--cEEEEEeCCCCCC--chhhhhhhhccccCCCCCeeEEEcCCCCCCCC
Q 044031 2 KKTIALYPGPAFHHMISMVELGKLILQHRSD--VSITILVPSMPLE--ESKTCSYINSISHRLNPIISFYYLPAIQMPSE 77 (468)
Q Consensus 2 ~~~Iv~~~~~~~GHv~P~l~LA~~L~~~G~~--h~Vt~~~~~~~~~--~~~~~~~~~~~~~~~~~~i~~~~i~~~~lp~~ 77 (468)
|+|||++|+|++||++|+++||++|+.+|++ +.|||+++..+.+ ...+...+.+... ...+|.+..+|++.+|++
T Consensus 3 ~~HVVlvPfpaqGHi~P~l~LAk~La~~g~~~~~~vT~~~t~~~~~~~~~~~~~~~~~~~~-~~~~i~~~~lp~~~~p~~ 81 (480)
T PLN00164 3 APTVVLLPVWGSGHLMSMLEAGKRLLASSGGGALSLTVLVMPPPTPESASEVAAHVRREAA-SGLDIRFHHLPAVEPPTD 81 (480)
T ss_pred CCEEEEeCCcchhHHHHHHHHHHHHHhCCCCCcEEEEEEEcCCCccchhHHHHHHHhhccc-CCCCEEEEECCCCCCCCc
Confidence 6799999999999999999999999998632 7899998876543 1122222221111 122699999998755555
Q ss_pred CCChhHHHHHHHHHhhHHHHHHHHhhhcCCCccEEEe----cCcHHHhhhCCCCeEEEecchhHHHHHHHhhhhhhhccc
Q 044031 78 TLSRADIAIESIKLNSSNVFQALENISLTSKILSFII----TSTTSFSYHPNIPTYTYFNSCASTLAAILYLPTLHNQIT 153 (468)
Q Consensus 78 ~~~~~~~~~~~~~~~~~~l~~ll~~~~~~~~pD~vI~----~~~~~vA~~lgIP~i~~~~~~~~~~~~~~~~p~~~~~~~ 153 (468)
.+....++..+.....+.++++++.+. .+++|||+ +|+.++|+++|||.+.|++++++.++++++++.......
T Consensus 82 ~e~~~~~~~~~~~~~~~~l~~~L~~l~--~pv~cIV~D~f~~Wa~dVA~elgIP~v~F~t~sA~~~~~~~~~~~~~~~~~ 159 (480)
T PLN00164 82 AAGVEEFISRYIQLHAPHVRAAIAGLS--CPVAALVVDFFCTPLLDVARELAVPAYVYFTSTAAMLALMLRLPALDEEVA 159 (480)
T ss_pred cccHHHHHHHHHHhhhHHHHHHHHhcC--CCceEEEECCcchhHHHHHHHhCCCEEEEECccHHHHHHHhhhhhhccccc
Confidence 444443344445556667777776652 25699999 999999999999999999999999999888876432211
Q ss_pred CCCCCCCCccccCCCCCCCCCCCCCccccCCCchhHHHHHHHhhhhcccceEEecChhhhhHHHHHHHHcCcccCCCCCC
Q 044031 154 SSFKDHPSSLLFIPGLPPVKSSFMPEPVLDRQKPIYDFFLNYSTSLSKSNGIIINTFDFLEQQAIKAIVNGDCVTNGTTP 233 (468)
Q Consensus 154 ~~~~~~~~~~~~~pg~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~s~~~le~~~~~~~~~~~~~~~~~~p 233 (468)
.++.... .+..+||+++++..++|..+..+....+..+........+++++++|||++||+.+++.++.....+|...+
T Consensus 160 ~~~~~~~-~~~~iPGlp~l~~~dlp~~~~~~~~~~~~~~~~~~~~~~~~~~vlvNTf~eLE~~~~~~~~~~~~~~~~~~~ 238 (480)
T PLN00164 160 VEFEEME-GAVDVPGLPPVPASSLPAPVMDKKSPNYAWFVYHGRRFMEAAGIIVNTAAELEPGVLAAIADGRCTPGRPAP 238 (480)
T ss_pred CcccccC-cceecCCCCCCChHHCCchhcCCCcHHHHHHHHHHHhhhhcCEEEEechHHhhHHHHHHHHhccccccCCCC
Confidence 1121111 234589999899999998765544333444555556677889999999999999999999765322332236
Q ss_pred CeeEecccccCCcCCCCCCCCCCcchhHHhhcCCCCCceEEeccCCCcCCCHHHHHHHHHHHHhCCCcEEEEEeCCCC--
Q 044031 234 PLHCIGPLIVDAKDRAGGVSDDVSSDCLTWLDSQPSGSVVFLCFGSRGTFSAPQLKEIAIGLERSNQRFLWVVRNPSN-- 311 (468)
Q Consensus 234 ~~~~VGpl~~~~~~~~~~~~~~~~~~l~~~l~~~~~~~~v~vs~GS~~~~~~~~~~~~~~al~~~~~~~l~~~~~~~~-- 311 (468)
+++.|||++....... . +..+++|.+||++++++|||||||||+...+.+++.+++.+|+.++++|||+++....
T Consensus 239 ~v~~vGPl~~~~~~~~-~--~~~~~~~~~wLd~~~~~svvyvsfGS~~~~~~~q~~ela~gL~~s~~~flWv~~~~~~~~ 315 (480)
T PLN00164 239 TVYPIGPVISLAFTPP-A--EQPPHECVRWLDAQPPASVVFLCFGSMGFFDAPQVREIAAGLERSGHRFLWVLRGPPAAG 315 (480)
T ss_pred ceEEeCCCccccccCC-C--ccchHHHHHHHHhCCCCceEEEEecccccCCHHHHHHHHHHHHHcCCCEEEEEcCCcccc
Confidence 8999999984321011 0 1145689999999999999999999999999999999999999999999999985310
Q ss_pred -------ccccCCChhHHhhccCCCeEecCCCCHHhhhCccCcceEEecCCcchHHHHHHhCCcEEecccccchhhHHHH
Q 044031 312 -------AAEAELPEGFLERTKERGLVVKSWAPQSTILGHESVGGFVTHCGWSSVVEAVTYGVPMIAWPLYAEQFLNSVA 384 (468)
Q Consensus 312 -------~~~~~~~~~~~~~~~~~~~~v~~~~pq~~il~~~~~~~~ithgG~~s~~eal~~GvP~v~~P~~~DQ~~na~~ 384 (468)
+....+|++|.++++++|+++.+|+||.+||+|+++++|||||||||++||+++|||||+||+++||+.||++
T Consensus 316 ~~~~~~~~~~~~lp~~~~~~~~~~g~~v~~w~PQ~~iL~h~~vg~fvtH~GwnS~~Eai~~GVP~l~~P~~~DQ~~Na~~ 395 (480)
T PLN00164 316 SRHPTDADLDELLPEGFLERTKGRGLVWPTWAPQKEILAHAAVGGFVTHCGWNSVLESLWHGVPMAPWPLYAEQHLNAFE 395 (480)
T ss_pred cccccccchhhhCChHHHHHhcCCCeEEeecCCHHHHhcCcccCeEEeecccchHHHHHHcCCCEEeCCccccchhHHHH
Confidence 0122488999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHhhcceeeeeccCCcccccCCCCccccHHHHHHHHHHHhcCc--hhHHHHHHHHHHHHHHHHhhcCCCCCChHHHHHHH
Q 044031 385 LVQEMKVAMPMFLNGEEETIGNGEGVVSAERVEERVRELMMGS--EGKALRERSLEMRMMAATAWNNNDGGSSFTAFSNL 462 (468)
Q Consensus 385 ~~~~~g~g~~~~~~~~~~~~~~~~~~~~~~~l~~av~~~l~~~--~~~~~~~~a~~l~~~~~~a~~~~~~g~~~~~~~~~ 462 (468)
++++||+|+.+... .++++.+++++|+++|+++|.++ +++++|++|+++++.+++|+. +||||+++|++|
T Consensus 396 ~~~~~gvG~~~~~~------~~~~~~~~~e~l~~av~~vm~~~~~~~~~~r~~a~~~~~~~~~a~~--~gGSS~~~l~~~ 467 (480)
T PLN00164 396 LVADMGVAVAMKVD------RKRDNFVEAAELERAVRSLMGGGEEEGRKAREKAAEMKAACRKAVE--EGGSSYAALQRL 467 (480)
T ss_pred HHHHhCeEEEeccc------cccCCcCcHHHHHHHHHHHhcCCchhHHHHHHHHHHHHHHHHHHhc--CCCcHHHHHHHH
Confidence 88889999999631 11134589999999999999875 488999999999999999999 999999999999
Q ss_pred HHHhh
Q 044031 463 FDLWQ 467 (468)
Q Consensus 463 ~~~~~ 467 (468)
|++++
T Consensus 468 v~~~~ 472 (480)
T PLN00164 468 AREIR 472 (480)
T ss_pred HHHHH
Confidence 99986
No 2
>PLN02992 coniferyl-alcohol glucosyltransferase
Probab=100.00 E-value=6.8e-73 Score=559.12 Aligned_cols=439 Identities=32% Similarity=0.551 Sum_probs=344.2
Q ss_pred cceEEEecCCCccCHHHHHHHHHHHH-hCCCCcEEEEEeCCCCCCchhhhhhhhccccCCCCCeeEEEcCCCC---CCCC
Q 044031 2 KKTIALYPGPAFHHMISMVELGKLIL-QHRSDVSITILVPSMPLEESKTCSYINSISHRLNPIISFYYLPAIQ---MPSE 77 (468)
Q Consensus 2 ~~~Iv~~~~~~~GHv~P~l~LA~~L~-~~G~~h~Vt~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~i~~~~---lp~~ 77 (468)
++||+++|+|++||++|+++||++|+ ++| +.|||+++.... ..+.+.. . ..++|++..+|++. +|+.
T Consensus 5 ~pHVvl~P~paqGHi~P~l~LAk~La~~~g--~~vT~v~t~~n~--~~~~~~~---~--~~~~i~~~~lp~p~~~glp~~ 75 (481)
T PLN02992 5 KPHAAMFSSPGMGHVIPVIELGKRLSANHG--FHVTVFVLETDA--ASAQSKF---L--NSTGVDIVGLPSPDISGLVDP 75 (481)
T ss_pred CcEEEEeCCcccchHHHHHHHHHHHHhCCC--cEEEEEeCCCch--hhhhhcc---c--cCCCceEEECCCccccCCCCC
Confidence 57999999999999999999999998 789 999999876432 2111110 0 11368899888643 3311
Q ss_pred CCChhHHHHHHHHHhhHHHHHHHHhhhcCCCccEEEe----cCcHHHhhhCCCCeEEEecchhHHHHHHHhhhhhhhccc
Q 044031 78 TLSRADIAIESIKLNSSNVFQALENISLTSKILSFII----TSTTSFSYHPNIPTYTYFNSCASTLAAILYLPTLHNQIT 153 (468)
Q Consensus 78 ~~~~~~~~~~~~~~~~~~l~~ll~~~~~~~~pD~vI~----~~~~~vA~~lgIP~i~~~~~~~~~~~~~~~~p~~~~~~~ 153 (468)
.......+......+.+.++++++++. .+|+|||+ +|+.++|+++|||.+.|++++++.++.+++.+.+.....
T Consensus 76 ~~~~~~~~~~~~~~~~~~~~~~l~~~~--~~p~cvV~D~f~~Wa~dVA~elgIP~v~F~t~sA~~~~~~~~~~~~~~~~~ 153 (481)
T PLN02992 76 SAHVVTKIGVIMREAVPTLRSKIAEMH--QKPTALIVDLFGTDALCLGGEFNMLTYIFIASNARFLGVSIYYPTLDKDIK 153 (481)
T ss_pred CccHHHHHHHHHHHhHHHHHHHHHhcC--CCCeEEEECCcchhHHHHHHHcCCCEEEEecCcHHHHHHHHhhhhhccccc
Confidence 111111233344455677777777652 27899999 899999999999999999999999888777765432211
Q ss_pred CCCCCCCCccccCCCCCCCCCCCCCccccCCCchhHHHHHHHhhhhcccceEEecChhhhhHHHHHHHHcCcccCCCCCC
Q 044031 154 SSFKDHPSSLLFIPGLPPVKSSFMPEPVLDRQKPIYDFFLNYSTSLSKSNGIIINTFDFLEQQAIKAIVNGDCVTNGTTP 233 (468)
Q Consensus 154 ~~~~~~~~~~~~~pg~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~s~~~le~~~~~~~~~~~~~~~~~~p 233 (468)
.... ....+..+||+++++..+++..+.++....+..+.+......+++++++|||++||+.+++.+++.........+
T Consensus 154 ~~~~-~~~~~~~iPg~~~l~~~dlp~~~~~~~~~~~~~~~~~~~~~~~a~gvlvNTf~eLE~~~l~~l~~~~~~~~~~~~ 232 (481)
T PLN02992 154 EEHT-VQRKPLAMPGCEPVRFEDTLDAYLVPDEPVYRDFVRHGLAYPKADGILVNTWEEMEPKSLKSLQDPKLLGRVARV 232 (481)
T ss_pred cccc-cCCCCcccCCCCccCHHHhhHhhcCCCcHHHHHHHHHHHhcccCCEEEEechHHHhHHHHHHHhhccccccccCC
Confidence 1110 011235689999898889987665554445566666667778899999999999999999998653100000015
Q ss_pred CeeEecccccCCcCCCCCCCCCCcchhHHhhcCCCCCceEEeccCCCcCCCHHHHHHHHHHHHhCCCcEEEEEeCCCC--
Q 044031 234 PLHCIGPLIVDAKDRAGGVSDDVSSDCLTWLDSQPSGSVVFLCFGSRGTFSAPQLKEIAIGLERSNQRFLWVVRNPSN-- 311 (468)
Q Consensus 234 ~~~~VGpl~~~~~~~~~~~~~~~~~~l~~~l~~~~~~~~v~vs~GS~~~~~~~~~~~~~~al~~~~~~~l~~~~~~~~-- 311 (468)
+++.|||++.... .. . .+++|.+|||+++++|||||||||+...+.+++.+++.+|+.++++|||+++...+
T Consensus 233 ~v~~VGPl~~~~~-~~-~----~~~~c~~wLd~~~~~sVvyvsfGS~~~l~~~q~~ela~gL~~s~~~flW~~r~~~~~~ 306 (481)
T PLN02992 233 PVYPIGPLCRPIQ-SS-K----TDHPVLDWLNKQPNESVLYISFGSGGSLSAKQLTELAWGLEMSQQRFVWVVRPPVDGS 306 (481)
T ss_pred ceEEecCccCCcC-CC-c----chHHHHHHHHcCCCCceEEEeecccccCCHHHHHHHHHHHHHcCCCEEEEEeCCcccc
Confidence 7999999986422 11 1 45679999999988899999999999999999999999999999999999974310
Q ss_pred --------------c-cccCCChhHHhhccCCCeEecCCCCHHhhhCccCcceEEecCCcchHHHHHHhCCcEEeccccc
Q 044031 312 --------------A-AEAELPEGFLERTKERGLVVKSWAPQSTILGHESVGGFVTHCGWSSVVEAVTYGVPMIAWPLYA 376 (468)
Q Consensus 312 --------------~-~~~~~~~~~~~~~~~~~~~v~~~~pq~~il~~~~~~~~ithgG~~s~~eal~~GvP~v~~P~~~ 376 (468)
+ ..+.+|++|.+|++++|+++.+|+||.+||+|+++++|||||||||++||+++|||||+||+++
T Consensus 307 ~~~~~~~~~~~~~~~~~~~~lp~~f~eR~~~rg~vv~~W~PQ~~iL~h~~vg~FitH~G~nS~~Eal~~GVP~l~~P~~~ 386 (481)
T PLN02992 307 ACSAYFSANGGETRDNTPEYLPEGFVSRTHDRGFVVPSWAPQAEILAHQAVGGFLTHCGWSSTLESVVGGVPMIAWPLFA 386 (481)
T ss_pred cccccccCcccccccchhhhCCHHHHHHhcCCCEEEeecCCHHHHhCCcccCeeEecCchhHHHHHHHcCCCEEecCccc
Confidence 0 0235899999999999999999999999999999999999999999999999999999999999
Q ss_pred chhhHHHHHHhhcceeeeeccCCcccccCCCCccccHHHHHHHHHHHhcCchhHHHHHHHHHHHHHHHHhhcCCCCCChH
Q 044031 377 EQFLNSVALVQEMKVAMPMFLNGEEETIGNGEGVVSAERVEERVRELMMGSEGKALRERSLEMRMMAATAWNNNDGGSSF 456 (468)
Q Consensus 377 DQ~~na~~~~~~~g~g~~~~~~~~~~~~~~~~~~~~~~~l~~av~~~l~~~~~~~~~~~a~~l~~~~~~a~~~~~~g~~~ 456 (468)
||+.||+++++++|+|+.++. +++.+++++|+++|+++|.++++++||++|+++++.+++|+.+.+||||+
T Consensus 387 DQ~~na~~~~~~~g~gv~~~~---------~~~~~~~~~l~~av~~vm~~~~g~~~r~~a~~~~~~a~~Av~~~~GGSS~ 457 (481)
T PLN02992 387 EQNMNAALLSDELGIAVRSDD---------PKEVISRSKIEALVRKVMVEEEGEEMRRKVKKLRDTAEMSLSIDGGGVAH 457 (481)
T ss_pred hhHHHHHHHHHHhCeeEEecC---------CCCcccHHHHHHHHHHHhcCCchHHHHHHHHHHHHHHHHHhcCCCCCchH
Confidence 999999999767899999973 12358999999999999998778899999999999999999300699999
Q ss_pred HHHHHHHHHhh
Q 044031 457 TAFSNLFDLWQ 467 (468)
Q Consensus 457 ~~~~~~~~~~~ 467 (468)
+|+++||++++
T Consensus 458 ~~l~~~v~~~~ 468 (481)
T PLN02992 458 ESLCRVTKECQ 468 (481)
T ss_pred HHHHHHHHHHH
Confidence 99999999986
No 3
>PLN03015 UDP-glucosyl transferase
Probab=100.00 E-value=1.3e-72 Score=553.86 Aligned_cols=444 Identities=32% Similarity=0.559 Sum_probs=346.8
Q ss_pred CcceEEEecCCCccCHHHHHHHHHHHHhC-CCCcEEEEEeCCCCCCchhhhhhhhccccCCCCCeeEEEcCCCCCCCCC-
Q 044031 1 MKKTIALYPGPAFHHMISMVELGKLILQH-RSDVSITILVPSMPLEESKTCSYINSISHRLNPIISFYYLPAIQMPSET- 78 (468)
Q Consensus 1 m~~~Iv~~~~~~~GHv~P~l~LA~~L~~~-G~~h~Vt~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~i~~~~lp~~~- 78 (468)
-++||+++|+|++||++|+++||++|+.+ | ..|||+++............+.... ..++|++..+|++.. ++.
T Consensus 2 ~~pHvvl~P~p~qGHi~P~l~LAk~La~~~g--~~vT~v~t~~~~~~~~~~~~~~~~~--~~~~i~~~~lp~~~~-~~l~ 76 (470)
T PLN03015 2 DQPHALLVASPGLGHLIPILELGNRLSSVLN--IHVTILAVTSGSSSPTETEAIHAAA--ARTTCQITEIPSVDV-DNLV 76 (470)
T ss_pred CCcEEEEECCcccccHHHHHHHHHHHHhCCC--CeEEEEECCCchhhhcccccccccc--CCCceEEEECCCCcc-ccCC
Confidence 04699999999999999999999999987 8 9999998766543210011122111 112599999986632 221
Q ss_pred ---CChhHHHHHHHHHhhHHHHHHHHhhhcCCCccEEEe----cCcHHHhhhCCCC-eEEEecchhHHHHHHHhhhhhhh
Q 044031 79 ---LSRADIAIESIKLNSSNVFQALENISLTSKILSFII----TSTTSFSYHPNIP-TYTYFNSCASTLAAILYLPTLHN 150 (468)
Q Consensus 79 ---~~~~~~~~~~~~~~~~~l~~ll~~~~~~~~pD~vI~----~~~~~vA~~lgIP-~i~~~~~~~~~~~~~~~~p~~~~ 150 (468)
......+........+.++++++++.. +++|||+ +|+.++|+++||| .++|++++++.++.++++|....
T Consensus 77 ~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~--~~~ciV~D~f~~w~~~vA~~lgIP~~~~f~~~~a~~~~~~~~l~~~~~ 154 (470)
T PLN03015 77 EPDATIFTKMVVKMRAMKPAVRDAVKSMKR--KPTVMIVDFFGTALMSIADDVGVTAKYVYIPSHAWFLAVMVYLPVLDT 154 (470)
T ss_pred CCCccHHHHHHHHHHhchHHHHHHHHhcCC--CCeEEEEcCCcHHHHHHHHHcCCCEEEEEcCHHHHHHHHHHhhhhhhc
Confidence 111112444555667788888877642 6899999 9999999999999 68999999998888888776432
Q ss_pred cccCCCCCCCCccccCCCCCCCCCCCCCccccCCCchhHHHHHHHhhhhcccceEEecChhhhhHHHHHHHHcCcccCCC
Q 044031 151 QITSSFKDHPSSLLFIPGLPPVKSSFMPEPVLDRQKPIYDFFLNYSTSLSKSNGIIINTFDFLEQQAIKAIVNGDCVTNG 230 (468)
Q Consensus 151 ~~~~~~~~~~~~~~~~pg~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~s~~~le~~~~~~~~~~~~~~~~ 230 (468)
.....+.+.+ .+..+||+|+++..+++..+.++....+..+.+......+++++++|||++||+.+++.+++.....+.
T Consensus 155 ~~~~~~~~~~-~~~~vPg~p~l~~~dlp~~~~~~~~~~~~~~~~~~~~~~~a~gvlvNTf~eLE~~~~~~l~~~~~~~~~ 233 (470)
T PLN03015 155 VVEGEYVDIK-EPLKIPGCKPVGPKELMETMLDRSDQQYKECVRSGLEVPMSDGVLVNTWEELQGNTLAALREDMELNRV 233 (470)
T ss_pred ccccccCCCC-CeeeCCCCCCCChHHCCHhhcCCCcHHHHHHHHHHHhcccCCEEEEechHHHhHHHHHHHHhhcccccc
Confidence 1111111111 235689999999999998776554444555556666788999999999999999999998763110000
Q ss_pred CCCCeeEecccccCCcCCCCCCCCCCcchhHHhhcCCCCCceEEeccCCCcCCCHHHHHHHHHHHHhCCCcEEEEEeCCC
Q 044031 231 TTPPLHCIGPLIVDAKDRAGGVSDDVSSDCLTWLDSQPSGSVVFLCFGSRGTFSAPQLKEIAIGLERSNQRFLWVVRNPS 310 (468)
Q Consensus 231 ~~p~~~~VGpl~~~~~~~~~~~~~~~~~~l~~~l~~~~~~~~v~vs~GS~~~~~~~~~~~~~~al~~~~~~~l~~~~~~~ 310 (468)
..++++.|||++.... .. . .+.+|.+|||+++++|||||||||+...+.+++.+++.+|+.++++|||+++.+.
T Consensus 234 ~~~~v~~VGPl~~~~~-~~-~----~~~~~~~WLd~~~~~sVvyvsFGS~~~~~~~q~~ela~gl~~s~~~FlWv~r~~~ 307 (470)
T PLN03015 234 MKVPVYPIGPIVRTNV-HV-E----KRNSIFEWLDKQGERSVVYVCLGSGGTLTFEQTVELAWGLELSGQRFVWVLRRPA 307 (470)
T ss_pred cCCceEEecCCCCCcc-cc-c----chHHHHHHHHhCCCCCEEEEECCcCCcCCHHHHHHHHHHHHhCCCcEEEEEecCc
Confidence 0156999999984321 11 1 3457999999999899999999999999999999999999999999999997431
Q ss_pred --------C-c-cccCCChhHHhhccCCCeEecCCCCHHhhhCccCcceEEecCCcchHHHHHHhCCcEEecccccchhh
Q 044031 311 --------N-A-AEAELPEGFLERTKERGLVVKSWAPQSTILGHESVGGFVTHCGWSSVVEAVTYGVPMIAWPLYAEQFL 380 (468)
Q Consensus 311 --------~-~-~~~~~~~~~~~~~~~~~~~v~~~~pq~~il~~~~~~~~ithgG~~s~~eal~~GvP~v~~P~~~DQ~~ 380 (468)
+ + ..+.+|++|.+|++++|+++.+|+||.+||+|+++++|||||||||++||+++|||||+||+++||+.
T Consensus 308 ~~~~~~~~~~~~~~~~lp~~f~er~~~rGl~v~~W~PQ~~vL~h~~vg~fvtH~GwnS~~Eai~~GvP~v~~P~~~DQ~~ 387 (470)
T PLN03015 308 SYLGASSSDDDQVSASLPEGFLDRTRGVGLVVTQWAPQVEILSHRSIGGFLSHCGWSSVLESLTKGVPIVAWPLYAEQWM 387 (470)
T ss_pred cccccccccccchhhcCChHHHHhhccCceEEEecCCHHHHhccCccCeEEecCCchhHHHHHHcCCCEEecccccchHH
Confidence 0 1 12358999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHhhcceeeeeccCCcccccCCCCccccHHHHHHHHHHHhcC--chhHHHHHHHHHHHHHHHHhhcCCCCCChHHH
Q 044031 381 NSVALVQEMKVAMPMFLNGEEETIGNGEGVVSAERVEERVRELMMG--SEGKALRERSLEMRMMAATAWNNNDGGSSFTA 458 (468)
Q Consensus 381 na~~~~~~~g~g~~~~~~~~~~~~~~~~~~~~~~~l~~av~~~l~~--~~~~~~~~~a~~l~~~~~~a~~~~~~g~~~~~ 458 (468)
||+++++.||+|+.+.. ..+.+.+++++|+++|+++|.+ +++++||+||+++++.+++|++ +||||++|
T Consensus 388 na~~~~~~~gvg~~~~~-------~~~~~~v~~e~i~~~v~~lm~~~~eeg~~~R~ra~~lk~~a~~Av~--eGGSS~~n 458 (470)
T PLN03015 388 NATLLTEEIGVAVRTSE-------LPSEKVIGREEVASLVRKIVAEEDEEGQKIRAKAEEVRVSSERAWS--HGGSSYNS 458 (470)
T ss_pred HHHHHHHHhCeeEEecc-------cccCCccCHHHHHHHHHHHHccCcccHHHHHHHHHHHHHHHHHHhc--CCCcHHHH
Confidence 99999889999999952 1123469999999999999963 5688999999999999999999 99999999
Q ss_pred HHHHHHHhh
Q 044031 459 FSNLFDLWQ 467 (468)
Q Consensus 459 ~~~~~~~~~ 467 (468)
+++|+++++
T Consensus 459 l~~~~~~~~ 467 (470)
T PLN03015 459 LFEWAKRCY 467 (470)
T ss_pred HHHHHHhcc
Confidence 999999874
No 4
>PLN02173 UDP-glucosyl transferase family protein
Probab=100.00 E-value=5.4e-72 Score=549.81 Aligned_cols=423 Identities=24% Similarity=0.395 Sum_probs=338.0
Q ss_pred cceEEEecCCCccCHHHHHHHHHHHHhCCCCcEEEEEeCCCCCCchhhhhhhhccccCCCCCeeEEEcCCCCCCCC-CCC
Q 044031 2 KKTIALYPGPAFHHMISMVELGKLILQHRSDVSITILVPSMPLEESKTCSYINSISHRLNPIISFYYLPAIQMPSE-TLS 80 (468)
Q Consensus 2 ~~~Iv~~~~~~~GHv~P~l~LA~~L~~~G~~h~Vt~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~i~~~~lp~~-~~~ 80 (468)
++||+++|+|++||++||++||++|+.+| +.|||+++....+. +.. . ..++|+++.++++ +|++ .+.
T Consensus 5 ~~hvv~~P~paqGHi~P~l~lAk~La~~G--~~vT~v~t~~~~~~--~~~---~----~~~~i~~~~ipdg-lp~~~~~~ 72 (449)
T PLN02173 5 RGHVLAVPFPSQGHITPIRQFCKRLHSKG--FKTTHTLTTFIFNT--IHL---D----PSSPISIATISDG-YDQGGFSS 72 (449)
T ss_pred CcEEEEecCcccccHHHHHHHHHHHHcCC--CEEEEEECCchhhh--ccc---C----CCCCEEEEEcCCC-CCCccccc
Confidence 46999999999999999999999999999 99999987653321 111 1 2236999999976 7763 222
Q ss_pred h---hHHHHHHHHHhhHHHHHHHHhhhcCCCc-cEEEe----cCcHHHhhhCCCCeEEEecchhHHHHHHHhhhhhhhcc
Q 044031 81 R---ADIAIESIKLNSSNVFQALENISLTSKI-LSFII----TSTTSFSYHPNIPTYTYFNSCASTLAAILYLPTLHNQI 152 (468)
Q Consensus 81 ~---~~~~~~~~~~~~~~l~~ll~~~~~~~~p-D~vI~----~~~~~vA~~lgIP~i~~~~~~~~~~~~~~~~p~~~~~~ 152 (468)
. ..++..+.....+.++++++....+.+| +|||+ +|+.++|+++|||.+.|++++++.+..+++. .+..
T Consensus 73 ~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~Pv~cvV~D~f~~Wa~dVA~elgIP~v~F~~~~a~~~~~~~~~-~~~~-- 149 (449)
T PLN02173 73 AGSVPEYLQNFKTFGSKTVADIIRKHQSTDNPITCIVYDSFMPWALDLAREFGLAAAPFFTQSCAVNYINYLS-YINN-- 149 (449)
T ss_pred ccCHHHHHHHHHHhhhHHHHHHHHHhhccCCCceEEEECCcchhHHHHHHHhCCCEEEEechHHHHHHHHHhH-Hhcc--
Confidence 2 1223333335667888888776432244 99999 9999999999999999999999888665432 2211
Q ss_pred cCCCCCCCCccccCCCCCCCCCCCCCccccCC--CchhHHHHHHHhhhhcccceEEecChhhhhHHHHHHHHcCcccCCC
Q 044031 153 TSSFKDHPSSLLFIPGLPPVKSSFMPEPVLDR--QKPIYDFFLNYSTSLSKSNGIIINTFDFLEQQAIKAIVNGDCVTNG 230 (468)
Q Consensus 153 ~~~~~~~~~~~~~~pg~~~~~~~~l~~~~~~~--~~~~~~~~~~~~~~~~~~~~~l~~s~~~le~~~~~~~~~~~~~~~~ 230 (468)
......+||+|+++..+++..+... ....++.+.+....+.+++++++|||++||+.+++.++..
T Consensus 150 -------~~~~~~~pg~p~l~~~dlp~~~~~~~~~~~~~~~~~~~~~~~~~~~~vlvNTf~eLE~~~~~~~~~~------ 216 (449)
T PLN02173 150 -------GSLTLPIKDLPLLELQDLPTFVTPTGSHLAYFEMVLQQFTNFDKADFVLVNSFHDLDLHENELLSKV------ 216 (449)
T ss_pred -------CCccCCCCCCCCCChhhCChhhcCCCCchHHHHHHHHHHhhhccCCEEEEeCHHHhhHHHHHHHHhc------
Confidence 0123458899988899998876542 2234555666677788899999999999999999888542
Q ss_pred CCCCeeEecccccCCc---C---CCC-CCC-C--CCcchhHHhhcCCCCCceEEeccCCCcCCCHHHHHHHHHHHHhCCC
Q 044031 231 TTPPLHCIGPLIVDAK---D---RAG-GVS-D--DVSSDCLTWLDSQPSGSVVFLCFGSRGTFSAPQLKEIAIGLERSNQ 300 (468)
Q Consensus 231 ~~p~~~~VGpl~~~~~---~---~~~-~~~-~--~~~~~l~~~l~~~~~~~~v~vs~GS~~~~~~~~~~~~~~al~~~~~ 300 (468)
++++.|||++.... . ... ..+ | ..+++|.+||++++++|+|||||||+...+.+++.+++.+| +++
T Consensus 217 --~~v~~VGPl~~~~~~~~~~~~~~~~~~~~~~~~~~~~c~~WLd~~~~~svvyvsfGS~~~~~~~~~~ela~gL--s~~ 292 (449)
T PLN02173 217 --CPVLTIGPTVPSMYLDQQIKSDNDYDLNLFDLKEAALCTDWLDKRPQGSVVYIAFGSMAKLSSEQMEEIASAI--SNF 292 (449)
T ss_pred --CCeeEEcccCchhhccccccccccccccccccccchHHHHHHhcCCCCceEEEEecccccCCHHHHHHHHHHh--cCC
Confidence 47999999974210 0 000 001 1 12346999999999999999999999999999999999999 788
Q ss_pred cEEEEEeCCCCccccCCChhHHhhccCCCeEecCCCCHHhhhCccCcceEEecCCcchHHHHHHhCCcEEecccccchhh
Q 044031 301 RFLWVVRNPSNAAEAELPEGFLERTKERGLVVKSWAPQSTILGHESVGGFVTHCGWSSVVEAVTYGVPMIAWPLYAEQFL 380 (468)
Q Consensus 301 ~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~pq~~il~~~~~~~~ithgG~~s~~eal~~GvP~v~~P~~~DQ~~ 380 (468)
+|+|+++.. ....+|++|.+++.++|+++.+|+||.+||+|+++++|||||||||++||+++|||||+||+++||+.
T Consensus 293 ~flWvvr~~---~~~~lp~~~~~~~~~~~~~i~~W~PQ~~iL~H~~v~~FvtHcGwnS~~Eai~~GVP~l~~P~~~DQ~~ 369 (449)
T PLN02173 293 SYLWVVRAS---EESKLPPGFLETVDKDKSLVLKWSPQLQVLSNKAIGCFMTHCGWNSTMEGLSLGVPMVAMPQWTDQPM 369 (449)
T ss_pred CEEEEEecc---chhcccchHHHhhcCCceEEeCCCCHHHHhCCCccceEEecCccchHHHHHHcCCCEEecCchhcchH
Confidence 999999853 12358889999887778887899999999999999999999999999999999999999999999999
Q ss_pred HHHHHHhhcceeeeeccCCcccccCCCCccccHHHHHHHHHHHhcCchhHHHHHHHHHHHHHHHHhhcCCCCCChHHHHH
Q 044031 381 NSVALVQEMKVAMPMFLNGEEETIGNGEGVVSAERVEERVRELMMGSEGKALRERSLEMRMMAATAWNNNDGGSSFTAFS 460 (468)
Q Consensus 381 na~~~~~~~g~g~~~~~~~~~~~~~~~~~~~~~~~l~~av~~~l~~~~~~~~~~~a~~l~~~~~~a~~~~~~g~~~~~~~ 460 (468)
||+++++.||+|+.+.. .+.++.+++++|+++|+++|.+++++++|+||+++++++++|+. +||||++|++
T Consensus 370 Na~~v~~~~g~Gv~v~~-------~~~~~~~~~e~v~~av~~vm~~~~~~~~r~~a~~~~~~a~~Av~--~gGSS~~~l~ 440 (449)
T PLN02173 370 NAKYIQDVWKVGVRVKA-------EKESGIAKREEIEFSIKEVMEGEKSKEMKENAGKWRDLAVKSLS--EGGSTDININ 440 (449)
T ss_pred HHHHHHHHhCceEEEee-------cccCCcccHHHHHHHHHHHhcCChHHHHHHHHHHHHHHHHHHhc--CCCcHHHHHH
Confidence 99999999999999974 12234689999999999999987788999999999999999999 9999999999
Q ss_pred HHHHHhhC
Q 044031 461 NLFDLWQI 468 (468)
Q Consensus 461 ~~~~~~~~ 468 (468)
+||++++|
T Consensus 441 ~~v~~~~~ 448 (449)
T PLN02173 441 TFVSKIQI 448 (449)
T ss_pred HHHHHhcc
Confidence 99999975
No 5
>PLN02410 UDP-glucoronosyl/UDP-glucosyl transferase family protein
Probab=100.00 E-value=2.4e-71 Score=547.90 Aligned_cols=428 Identities=25% Similarity=0.420 Sum_probs=337.9
Q ss_pred ceEEEecCCCccCHHHHHHHHHHHHhCCCCcEEEEEeCCCCCCchhhhhhhhccccCCCCCeeEEEcCCCCCCCC-CCCh
Q 044031 3 KTIALYPGPAFHHMISMVELGKLILQHRSDVSITILVPSMPLEESKTCSYINSISHRLNPIISFYYLPAIQMPSE-TLSR 81 (468)
Q Consensus 3 ~~Iv~~~~~~~GHv~P~l~LA~~L~~~G~~h~Vt~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~i~~~~lp~~-~~~~ 81 (468)
+||+++|+|++||++||++||++|+.+| +.|||+++...... .. . ..++|++..+|++ +|++ .+..
T Consensus 8 ~HVvlvPfpaqGHi~P~l~LAk~La~~G--~~VT~v~T~~n~~~----~~--~----~~~~i~~~~ip~g-lp~~~~~~~ 74 (451)
T PLN02410 8 RRVVLVPVPAQGHISPMMQLAKTLHLKG--FSITIAQTKFNYFS----PS--D----DFTDFQFVTIPES-LPESDFKNL 74 (451)
T ss_pred CEEEEECCCccccHHHHHHHHHHHHcCC--CEEEEEeCcccccc----cc--c----CCCCeEEEeCCCC-CCccccccc
Confidence 5999999999999999999999999999 99999987654311 00 0 2236999999876 7763 2221
Q ss_pred --hHHHHHHHHHhhHHHHHHHHhhhc--CCCccEEEe----cCcHHHhhhCCCCeEEEecchhHHHHHHHhhhhhhhccc
Q 044031 82 --ADIAIESIKLNSSNVFQALENISL--TSKILSFII----TSTTSFSYHPNIPTYTYFNSCASTLAAILYLPTLHNQIT 153 (468)
Q Consensus 82 --~~~~~~~~~~~~~~l~~ll~~~~~--~~~pD~vI~----~~~~~vA~~lgIP~i~~~~~~~~~~~~~~~~p~~~~~~~ 153 (468)
..++........+.++++++++.. ..+++|||+ +|+.++|+++|||.+.|++++++.++++++++.+.....
T Consensus 75 ~~~~~~~~~~~~~~~~~~~~L~~l~~~~~~p~~cVI~D~f~~Wa~dvA~~lgIP~v~F~t~~a~~~~~~~~~~~~~~~~~ 154 (451)
T PLN02410 75 GPIEFLHKLNKECQVSFKDCLGQLVLQQGNEIACVVYDEFMYFAEAAAKEFKLPNVIFSTTSATAFVCRSVFDKLYANNV 154 (451)
T ss_pred CHHHHHHHHHHHhHHHHHHHHHHHHhccCCCcEEEEECCcchHHHHHHHHcCCCEEEEEccCHHHHHHHHHHHHHHhccC
Confidence 122333334556677888877642 346799999 999999999999999999999999988877655443211
Q ss_pred -CCCCCC-CCccccCCCCCCCCCCCCCccccCCCchhHHHHHHHhhhhcccceEEecChhhhhHHHHHHHHcCcccCCCC
Q 044031 154 -SSFKDH-PSSLLFIPGLPPVKSSFMPEPVLDRQKPIYDFFLNYSTSLSKSNGIIINTFDFLEQQAIKAIVNGDCVTNGT 231 (468)
Q Consensus 154 -~~~~~~-~~~~~~~pg~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~s~~~le~~~~~~~~~~~~~~~~~ 231 (468)
.++... ......+||+++++..+++.............+.. .....+++++++|||++||+.+++.+....
T Consensus 155 ~~~~~~~~~~~~~~iPg~~~~~~~dlp~~~~~~~~~~~~~~~~-~~~~~~~~~vlvNTf~eLE~~~~~~l~~~~------ 227 (451)
T PLN02410 155 LAPLKEPKGQQNELVPEFHPLRCKDFPVSHWASLESIMELYRN-TVDKRTASSVIINTASCLESSSLSRLQQQL------ 227 (451)
T ss_pred CCCccccccCccccCCCCCCCChHHCcchhcCCcHHHHHHHHH-HhhcccCCEEEEeChHHhhHHHHHHHHhcc------
Confidence 111111 11233589999888888886543322222232222 224567889999999999999999997643
Q ss_pred CCCeeEecccccCCcCCCCCCCCCCcchhHHhhcCCCCCceEEeccCCCcCCCHHHHHHHHHHHHhCCCcEEEEEeCC-C
Q 044031 232 TPPLHCIGPLIVDAKDRAGGVSDDVSSDCLTWLDSQPSGSVVFLCFGSRGTFSAPQLKEIAIGLERSNQRFLWVVRNP-S 310 (468)
Q Consensus 232 ~p~~~~VGpl~~~~~~~~~~~~~~~~~~l~~~l~~~~~~~~v~vs~GS~~~~~~~~~~~~~~al~~~~~~~l~~~~~~-~ 310 (468)
.+++++|||++....... +. +....+|.+|||+++++|||||||||+...+.+++.+++.+|+.++++|||+++.. .
T Consensus 228 ~~~v~~vGpl~~~~~~~~-~~-~~~~~~~~~wLd~~~~~sVvyvsfGS~~~~~~~q~~ela~gLe~s~~~FlWv~r~~~~ 305 (451)
T PLN02410 228 QIPVYPIGPLHLVASAPT-SL-LEENKSCIEWLNKQKKNSVIFVSLGSLALMEINEVMETASGLDSSNQQFLWVIRPGSV 305 (451)
T ss_pred CCCEEEecccccccCCCc-cc-cccchHHHHHHHhCCCCcEEEEEccccccCCHHHHHHHHHHHHhcCCCeEEEEccCcc
Confidence 158999999975422011 10 11345789999999989999999999999999999999999999999999999853 1
Q ss_pred C--ccccCCChhHHhhccCCCeEecCCCCHHhhhCccCcceEEecCCcchHHHHHHhCCcEEecccccchhhHHHHHHhh
Q 044031 311 N--AAEAELPEGFLERTKERGLVVKSWAPQSTILGHESVGGFVTHCGWSSVVEAVTYGVPMIAWPLYAEQFLNSVALVQE 388 (468)
Q Consensus 311 ~--~~~~~~~~~~~~~~~~~~~~v~~~~pq~~il~~~~~~~~ithgG~~s~~eal~~GvP~v~~P~~~DQ~~na~~~~~~ 388 (468)
+ +....+|++|.+|++++++++ +|+||.+||+|+++++|||||||||++||+++|||||+||+++||+.||+++++.
T Consensus 306 ~~~~~~~~lp~~f~er~~~~g~v~-~w~PQ~~iL~h~~v~~fvtH~G~nS~~Ea~~~GvP~l~~P~~~DQ~~na~~~~~~ 384 (451)
T PLN02410 306 RGSEWIESLPKEFSKIISGRGYIV-KWAPQKEVLSHPAVGGFWSHCGWNSTLESIGEGVPMICKPFSSDQKVNARYLECV 384 (451)
T ss_pred cccchhhcCChhHHHhccCCeEEE-ccCCHHHHhCCCccCeeeecCchhHHHHHHHcCCCEEeccccccCHHHHHHHHHH
Confidence 1 112348999999998777666 8999999999999999999999999999999999999999999999999999988
Q ss_pred cceeeeeccCCcccccCCCCccccHHHHHHHHHHHhcCchhHHHHHHHHHHHHHHHHhhcCCCCCChHHHHHHHHHHhh
Q 044031 389 MKVAMPMFLNGEEETIGNGEGVVSAERVEERVRELMMGSEGKALRERSLEMRMMAATAWNNNDGGSSFTAFSNLFDLWQ 467 (468)
Q Consensus 389 ~g~g~~~~~~~~~~~~~~~~~~~~~~~l~~av~~~l~~~~~~~~~~~a~~l~~~~~~a~~~~~~g~~~~~~~~~~~~~~ 467 (468)
||+|+.+. .. +++++|+++|+++|.++++++||++|+++++.+++|+. +||||++|+++||++++
T Consensus 385 ~~~G~~~~---------~~---~~~~~v~~av~~lm~~~~~~~~r~~a~~l~~~~~~a~~--~gGsS~~~l~~fv~~~~ 449 (451)
T PLN02410 385 WKIGIQVE---------GD---LDRGAVERAVKRLMVEEEGEEMRKRAISLKEQLRASVI--SGGSSHNSLEEFVHFMR 449 (451)
T ss_pred hCeeEEeC---------Cc---ccHHHHHHHHHHHHcCCcHHHHHHHHHHHHHHHHHHhc--CCCCHHHHHHHHHHHHH
Confidence 89999996 24 89999999999999887788999999999999999999 99999999999999986
No 6
>PLN02207 UDP-glycosyltransferase
Probab=100.00 E-value=5e-71 Score=544.87 Aligned_cols=449 Identities=30% Similarity=0.604 Sum_probs=337.0
Q ss_pred CcceEEEecCCCccCHHHHHHHHHHHHhCCCCcEEEEEeCCCCCCchhhhhhhhccccCCCCCeeEEEcCCCC-CCC--C
Q 044031 1 MKKTIALYPGPAFHHMISMVELGKLILQHRSDVSITILVPSMPLEESKTCSYINSISHRLNPIISFYYLPAIQ-MPS--E 77 (468)
Q Consensus 1 m~~~Iv~~~~~~~GHv~P~l~LA~~L~~~G~~h~Vt~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~i~~~~-lp~--~ 77 (468)
=++||+++|+|++||++|+++||++|+.+|+...|||+++..+.+. .+...+..... ..++|+|..+|+.. .++ +
T Consensus 2 ~~~hvv~~P~p~qGHi~P~l~lA~~La~~gg~~~vT~~~t~~~~~~-~~~~~~~~~~~-~~~~i~~~~lp~~~~~~~~~~ 79 (468)
T PLN02207 2 RNAELIFIPTPTVGHLVPFLEFARRLIEQDDRIRITILLMKLQGQS-HLDTYVKSIAS-SQPFVRFIDVPELEEKPTLGG 79 (468)
T ss_pred CCcEEEEeCCcchhhHHHHHHHHHHHHhCCCCeEEEEEEcCCCcch-hhHHhhhhccC-CCCCeEEEEeCCCCCCCcccc
Confidence 0459999999999999999999999999874478999988776532 12222222111 23479999999642 222 1
Q ss_pred CCChhHHHHHHHHHhhH----HHHHHHHhhhcC-CCccEEEe----cCcHHHhhhCCCCeEEEecchhHHHHHHHhhhhh
Q 044031 78 TLSRADIAIESIKLNSS----NVFQALENISLT-SKILSFII----TSTTSFSYHPNIPTYTYFNSCASTLAAILYLPTL 148 (468)
Q Consensus 78 ~~~~~~~~~~~~~~~~~----~l~~ll~~~~~~-~~pD~vI~----~~~~~vA~~lgIP~i~~~~~~~~~~~~~~~~p~~ 148 (468)
..+....+........+ .+.++++....+ .+++|||+ +|+.++|+++|||.+.|++++++.++.+++++..
T Consensus 80 ~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~pv~cvV~D~~~~w~~~vA~~~gip~~~f~~~~a~~~~~~~~~~~~ 159 (468)
T PLN02207 80 TQSVEAYVYDVIEKNIPLVRNIVMDILSSLALDGVKVKGFVADFFCLPMIDVAKDVSLPFYVFLTTNSGFLAMMQYLADR 159 (468)
T ss_pred ccCHHHHHHHHHHhcchhHHHHHHHHHHHhccCCCCeEEEEECCcchHHHHHHHHhCCCEEEEECccHHHHHHHHHhhhc
Confidence 11222223334444433 344444433211 23489999 9999999999999999999999999988877654
Q ss_pred hhccc-CCCCCCCCccccCCCC-CCCCCCCCCccccCCCchhHHHHHHHhhhhcccceEEecChhhhhHHHHHHHHcCcc
Q 044031 149 HNQIT-SSFKDHPSSLLFIPGL-PPVKSSFMPEPVLDRQKPIYDFFLNYSTSLSKSNGIIINTFDFLEQQAIKAIVNGDC 226 (468)
Q Consensus 149 ~~~~~-~~~~~~~~~~~~~pg~-~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~s~~~le~~~~~~~~~~~~ 226 (468)
..... ....+. .....+||+ ++++..+++..+..... +..+.+....+.+++++++|||++||.++++.++...
T Consensus 160 ~~~~~~~~~~~~-~~~~~vPgl~~~l~~~dlp~~~~~~~~--~~~~~~~~~~~~~~~~vlvNtf~~LE~~~~~~~~~~~- 235 (468)
T PLN02207 160 HSKDTSVFVRNS-EEMLSIPGFVNPVPANVLPSALFVEDG--YDAYVKLAILFTKANGILVNSSFDIEPYSVNHFLDEQ- 235 (468)
T ss_pred cccccccCcCCC-CCeEECCCCCCCCChHHCcchhcCCcc--HHHHHHHHHhcccCCEEEEEchHHHhHHHHHHHHhcc-
Confidence 32110 001111 123568998 67999999987643222 4445555667788999999999999999988885410
Q ss_pred cCCCCCCCeeEecccccCCcCCCCCCCCCCcchhHHhhcCCCCCceEEeccCCCcCCCHHHHHHHHHHHHhCCCcEEEEE
Q 044031 227 VTNGTTPPLHCIGPLIVDAKDRAGGVSDDVSSDCLTWLDSQPSGSVVFLCFGSRGTFSAPQLKEIAIGLERSNQRFLWVV 306 (468)
Q Consensus 227 ~~~~~~p~~~~VGpl~~~~~~~~~~~~~~~~~~l~~~l~~~~~~~~v~vs~GS~~~~~~~~~~~~~~al~~~~~~~l~~~ 306 (468)
..|+++.|||++.....+........+++|.+||++++++|+|||||||+...+.+++.+++.+|+.++++|||++
T Consensus 236 ----~~p~v~~VGPl~~~~~~~~~~~~~~~~~~~~~WLd~~~~~sVVyvSfGS~~~~~~~q~~ela~~l~~~~~~flW~~ 311 (468)
T PLN02207 236 ----NYPSVYAVGPIFDLKAQPHPEQDLARRDELMKWLDDQPEASVVFLCFGSMGRLRGPLVKEIAHGLELCQYRFLWSL 311 (468)
T ss_pred ----CCCcEEEecCCcccccCCCCccccchhhHHHHHHhcCCCCcEEEEEeccCcCCCHHHHHHHHHHHHHCCCcEEEEE
Confidence 1378999999986432111000011236799999999888999999999999999999999999999999999999
Q ss_pred eCCCCccccCCChhHHhhccCCCeEecCCCCHHhhhCccCcceEEecCCcchHHHHHHhCCcEEecccccchhhHHHHHH
Q 044031 307 RNPSNAAEAELPEGFLERTKERGLVVKSWAPQSTILGHESVGGFVTHCGWSSVVEAVTYGVPMIAWPLYAEQFLNSVALV 386 (468)
Q Consensus 307 ~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~pq~~il~~~~~~~~ithgG~~s~~eal~~GvP~v~~P~~~DQ~~na~~~~ 386 (468)
+.......+.+|++|.+++.++++++ +|+||.+||+|+++++|||||||||++||+++|||||+||+++||+.||++++
T Consensus 312 r~~~~~~~~~lp~~f~er~~~~g~i~-~W~PQ~~IL~H~~vg~FvTH~GwnS~~Eai~~GVP~l~~P~~~DQ~~Na~~~~ 390 (468)
T PLN02207 312 RTEEVTNDDLLPEGFLDRVSGRGMIC-GWSPQVEILAHKAVGGFVSHCGWNSIVESLWFGVPIVTWPMYAEQQLNAFLMV 390 (468)
T ss_pred eCCCccccccCCHHHHhhcCCCeEEE-EeCCHHHHhcccccceeeecCccccHHHHHHcCCCEEecCccccchhhHHHHH
Confidence 95311112458999999988777555 99999999999999999999999999999999999999999999999999998
Q ss_pred hhcceeeeeccCCcccccCCCCccccHHHHHHHHHHHhcCchhHHHHHHHHHHHHHHHHhhcCCCCCChHHHHHHHHHHh
Q 044031 387 QEMKVAMPMFLNGEEETIGNGEGVVSAERVEERVRELMMGSEGKALRERSLEMRMMAATAWNNNDGGSSFTAFSNLFDLW 466 (468)
Q Consensus 387 ~~~g~g~~~~~~~~~~~~~~~~~~~~~~~l~~av~~~l~~~~~~~~~~~a~~l~~~~~~a~~~~~~g~~~~~~~~~~~~~ 466 (468)
+.||+|+.+..+. . ...++.+++++|+++|+++|++ ++++||+||+++++.+++|+. +||||++||++||+++
T Consensus 391 ~~~gvGv~~~~~~---~-~~~~~~v~~e~i~~av~~vm~~-~~~~~r~~a~~l~~~a~~A~~--~GGSS~~~l~~~v~~~ 463 (468)
T PLN02207 391 KELKLAVELKLDY---R-VHSDEIVNANEIETAIRCVMNK-DNNVVRKRVMDISQMIQRATK--NGGSSFAAIEKFIHDV 463 (468)
T ss_pred HHhCceEEEeccc---c-cccCCcccHHHHHHHHHHHHhc-chHHHHHHHHHHHHHHHHHhc--CCCcHHHHHHHHHHHH
Confidence 8899999884200 0 0112357999999999999973 356999999999999999999 9999999999999998
Q ss_pred h
Q 044031 467 Q 467 (468)
Q Consensus 467 ~ 467 (468)
+
T Consensus 464 ~ 464 (468)
T PLN02207 464 I 464 (468)
T ss_pred H
Confidence 6
No 7
>PLN03004 UDP-glycosyltransferase
Probab=100.00 E-value=7.4e-71 Score=542.07 Aligned_cols=433 Identities=46% Similarity=0.775 Sum_probs=335.4
Q ss_pred cceEEEecCCCccCHHHHHHHHHHHHhCCCCcEEEEEeCCCCCCchhhhhhhhccccCCCCCeeEEEcCCCC-CCCCCCC
Q 044031 2 KKTIALYPGPAFHHMISMVELGKLILQHRSDVSITILVPSMPLEESKTCSYINSISHRLNPIISFYYLPAIQ-MPSETLS 80 (468)
Q Consensus 2 ~~~Iv~~~~~~~GHv~P~l~LA~~L~~~G~~h~Vt~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~i~~~~-lp~~~~~ 80 (468)
+.|||++|+|++||++||++||++|+.+|+.+.||++....+.+.......+..... ..++|++..+|++. .+.+...
T Consensus 3 ~~Hvvl~P~p~qGHi~P~l~LA~~La~~g~~~~vti~~~~~~~~~~~~~~~~~~~~~-~~~~i~~~~lp~~~~~~~~~~~ 81 (451)
T PLN03004 3 EEAIVLYPAPPIGHLVSMVELGKTILSKNPSLSIHIILVPPPYQPESTATYISSVSS-SFPSITFHHLPAVTPYSSSSTS 81 (451)
T ss_pred CcEEEEeCCcccchHHHHHHHHHHHHhCCCceEEEEEEecCcchhhhhhhhhccccC-CCCCeEEEEcCCCCCCCCcccc
Confidence 579999999999999999999999999974345666555555432221111111111 22469999999772 1222111
Q ss_pred ---hhHHHHHHHHHhhHHHHHHHHhhhcCCCccEEEe----cCcHHHhhhCCCCeEEEecchhHHHHHHHhhhhhhhccc
Q 044031 81 ---RADIAIESIKLNSSNVFQALENISLTSKILSFII----TSTTSFSYHPNIPTYTYFNSCASTLAAILYLPTLHNQIT 153 (468)
Q Consensus 81 ---~~~~~~~~~~~~~~~l~~ll~~~~~~~~pD~vI~----~~~~~vA~~lgIP~i~~~~~~~~~~~~~~~~p~~~~~~~ 153 (468)
....+........+.+.++++++....+++|||+ +|+..+|+++|||.+.|++++++.++.+++++.......
T Consensus 82 ~~~~~~~~~~~~~~~~~~~~~~l~~l~~~~pv~cII~D~~~~Wa~~vA~~lgIP~v~F~t~sA~~~~~~~~~~~~~~~~~ 161 (451)
T PLN03004 82 RHHHESLLLEILCFSNPSVHRTLFSLSRNFNVRAMIIDFFCTAVLDITADFTFPVYFFYTSGAACLAFSFYLPTIDETTP 161 (451)
T ss_pred ccCHHHHHHHHHHhhhHHHHHHHHhcCCCCCceEEEECCcchhHHHHHHHhCCCEEEEeCHhHHHHHHHHHHHhcccccc
Confidence 1122334445566677888877643335699999 899999999999999999999999999888765432110
Q ss_pred -CCCCCCCCccccCCCCCCCCCCCCCccccCCCchhHHHHHHHhhhhcccceEEecChhhhhHHHHHHHHcCcccCCCCC
Q 044031 154 -SSFKDHPSSLLFIPGLPPVKSSFMPEPVLDRQKPIYDFFLNYSTSLSKSNGIIINTFDFLEQQAIKAIVNGDCVTNGTT 232 (468)
Q Consensus 154 -~~~~~~~~~~~~~pg~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~s~~~le~~~~~~~~~~~~~~~~~~ 232 (468)
.... ...+..+||+|.++.++++..+.++....+..+.+....+.+++++++|||++||+.+++.+.... ..
T Consensus 162 ~~~~~--~~~~v~iPg~p~l~~~dlp~~~~~~~~~~~~~~~~~~~~~~~~~~vl~NTf~eLE~~~l~~l~~~~-----~~ 234 (451)
T PLN03004 162 GKNLK--DIPTVHIPGVPPMKGSDMPKAVLERDDEVYDVFIMFGKQLSKSSGIIINTFDALENRAIKAITEEL-----CF 234 (451)
T ss_pred ccccc--cCCeecCCCCCCCChHHCchhhcCCchHHHHHHHHHHHhhcccCeeeeeeHHHhHHHHHHHHHhcC-----CC
Confidence 0111 112356899999999999987765544445556666677788899999999999999999996532 01
Q ss_pred CCeeEecccccCCcCCCCCCCCCCcchhHHhhcCCCCCceEEeccCCCcCCCHHHHHHHHHHHHhCCCcEEEEEeCC-CC
Q 044031 233 PPLHCIGPLIVDAKDRAGGVSDDVSSDCLTWLDSQPSGSVVFLCFGSRGTFSAPQLKEIAIGLERSNQRFLWVVRNP-SN 311 (468)
Q Consensus 233 p~~~~VGpl~~~~~~~~~~~~~~~~~~l~~~l~~~~~~~~v~vs~GS~~~~~~~~~~~~~~al~~~~~~~l~~~~~~-~~ 311 (468)
++++.|||++......... ...+.+|.+|||+++++|||||||||+...+.+++.+++.+|+.++++|||+++.. ..
T Consensus 235 ~~v~~vGPl~~~~~~~~~~--~~~~~~c~~wLd~~~~~sVvyvsfGS~~~~~~~q~~ela~gL~~s~~~FlW~~r~~~~~ 312 (451)
T PLN03004 235 RNIYPIGPLIVNGRIEDRN--DNKAVSCLNWLDSQPEKSVVFLCFGSLGLFSKEQVIEIAVGLEKSGQRFLWVVRNPPEL 312 (451)
T ss_pred CCEEEEeeeccCccccccc--cchhhHHHHHHHhCCCCceEEEEecccccCCHHHHHHHHHHHHHCCCCEEEEEcCCccc
Confidence 5899999998532101100 01235699999999889999999999999999999999999999999999999953 10
Q ss_pred -c---ccc-CCChhHHhhccCCCeEecCCCCHHhhhCccCcceEEecCCcchHHHHHHhCCcEEecccccchhhHHHHHH
Q 044031 312 -A---AEA-ELPEGFLERTKERGLVVKSWAPQSTILGHESVGGFVTHCGWSSVVEAVTYGVPMIAWPLYAEQFLNSVALV 386 (468)
Q Consensus 312 -~---~~~-~~~~~~~~~~~~~~~~v~~~~pq~~il~~~~~~~~ithgG~~s~~eal~~GvP~v~~P~~~DQ~~na~~~~ 386 (468)
. ... .+|++|.+|++++|+++.+|+||.+||+|+++++|||||||||++||+++|||||+||+++||+.||++++
T Consensus 313 ~~~~~~~~~~lp~gf~er~~~~g~~v~~W~PQ~~iL~H~~v~~FvTH~G~nS~lEal~~GVP~v~~P~~~DQ~~na~~~~ 392 (451)
T PLN03004 313 EKTELDLKSLLPEGFLSRTEDKGMVVKSWAPQVPVLNHKAVGGFVTHCGWNSILEAVCAGVPMVAWPLYAEQRFNRVMIV 392 (451)
T ss_pred cccccchhhhCChHHHHhccCCcEEEEeeCCHHHHhCCCccceEeccCcchHHHHHHHcCCCEEeccccccchhhHHHHH
Confidence 0 112 38999999999999999999999999999999999999999999999999999999999999999999998
Q ss_pred hhcceeeeeccCCcccccCCCCccccHHHHHHHHHHHhcCchhHHHHHHHHHHHHHHHHhhcCCCCCChHH
Q 044031 387 QEMKVAMPMFLNGEEETIGNGEGVVSAERVEERVRELMMGSEGKALRERSLEMRMMAATAWNNNDGGSSFT 457 (468)
Q Consensus 387 ~~~g~g~~~~~~~~~~~~~~~~~~~~~~~l~~av~~~l~~~~~~~~~~~a~~l~~~~~~a~~~~~~g~~~~ 457 (468)
+.||+|+.++. .+++.+++++|+++|+++|+|+ +||+||+++++.+++|++ +||||++
T Consensus 393 ~~~g~g~~l~~--------~~~~~~~~e~l~~av~~vm~~~---~~r~~a~~~~~~a~~Av~--~GGSS~~ 450 (451)
T PLN03004 393 DEIKIAISMNE--------SETGFVSSTEVEKRVQEIIGEC---PVRERTMAMKNAAELALT--ETGSSHT 450 (451)
T ss_pred HHhCceEEecC--------CcCCccCHHHHHHHHHHHhcCH---HHHHHHHHHHHHHHHHhc--CCCCCCC
Confidence 78899999973 2224589999999999999987 899999999999999999 9999974
No 8
>PLN02555 limonoid glucosyltransferase
Probab=100.00 E-value=2.8e-70 Score=542.03 Aligned_cols=440 Identities=25% Similarity=0.404 Sum_probs=339.6
Q ss_pred cceEEEecCCCccCHHHHHHHHHHHHhCCCCcEEEEEeCCCCCCchhhhh--hh-hcc-ccCCCCCeeEEEcCCCCCCCC
Q 044031 2 KKTIALYPGPAFHHMISMVELGKLILQHRSDVSITILVPSMPLEESKTCS--YI-NSI-SHRLNPIISFYYLPAIQMPSE 77 (468)
Q Consensus 2 ~~~Iv~~~~~~~GHv~P~l~LA~~L~~~G~~h~Vt~~~~~~~~~~~~~~~--~~-~~~-~~~~~~~i~~~~i~~~~lp~~ 77 (468)
++||+++|+|++||++||++||++|+.+| ..|||+++..... .+.+ .+ ... .......++|..++++ +|++
T Consensus 7 ~~HVv~~PfpaqGHi~Pml~lA~~La~~G--~~vT~v~T~~~~~--~~~~a~~~~~~~~~~~~~~~i~~~~~pdg-lp~~ 81 (480)
T PLN02555 7 LVHVMLVSFPGQGHVNPLLRLGKLLASKG--LLVTFVTTESWGK--KMRQANKIQDGVLKPVGDGFIRFEFFEDG-WAED 81 (480)
T ss_pred CCEEEEECCcccccHHHHHHHHHHHHhCC--CeEEEEeccchhh--hhhccccccccccccCCCCeEEEeeCCCC-CCCC
Confidence 37999999999999999999999999999 9999998875332 2221 01 110 0001123677767764 7665
Q ss_pred CCCh---hHHHHHHHHHhhHHHHHHHHhhhcC-CCccEEEe----cCcHHHhhhCCCCeEEEecchhHHHHHHHhhhhhh
Q 044031 78 TLSR---ADIAIESIKLNSSNVFQALENISLT-SKILSFII----TSTTSFSYHPNIPTYTYFNSCASTLAAILYLPTLH 149 (468)
Q Consensus 78 ~~~~---~~~~~~~~~~~~~~l~~ll~~~~~~-~~pD~vI~----~~~~~vA~~lgIP~i~~~~~~~~~~~~~~~~p~~~ 149 (468)
.+.. ..++..+.....+.++++++.+..+ .+++|||+ +|+.++|+++|||.++|++++++.++.+++++...
T Consensus 82 ~~~~~~~~~~~~~~~~~~~~~l~~~l~~~~~~~~pv~ciV~D~~~~wa~~vA~~~gIP~~~F~t~~a~~~~~~~~~~~~~ 161 (480)
T PLN02555 82 DPRRQDLDLYLPQLELVGKREIPNLVKRYAEQGRPVSCLINNPFIPWVCDVAEELGIPSAVLWVQSCACFSAYYHYYHGL 161 (480)
T ss_pred cccccCHHHHHHHHHHhhhHHHHHHHHHHhccCCCceEEEECCcchHHHHHHHHcCCCeEEeecccHHHHHHHHHHhhcC
Confidence 4321 1122222334566777888766432 34599999 99999999999999999999999999887774211
Q ss_pred hcccCCCCCC--CCccccCCCCCCCCCCCCCccccC--CCchhHHHHHHHhhhhcccceEEecChhhhhHHHHHHHHcCc
Q 044031 150 NQITSSFKDH--PSSLLFIPGLPPVKSSFMPEPVLD--RQKPIYDFFLNYSTSLSKSNGIIINTFDFLEQQAIKAIVNGD 225 (468)
Q Consensus 150 ~~~~~~~~~~--~~~~~~~pg~~~~~~~~l~~~~~~--~~~~~~~~~~~~~~~~~~~~~~l~~s~~~le~~~~~~~~~~~ 225 (468)
.++... ......+||+|.++.+++|.++.. .....++.+.+......+++++++|||++||+.+++.++...
T Consensus 162 ----~~~~~~~~~~~~~~iPglp~l~~~dlp~~~~~~~~~~~~~~~~~~~~~~~~~a~~vlvNTf~eLE~~~~~~l~~~~ 237 (480)
T PLN02555 162 ----VPFPTETEPEIDVQLPCMPLLKYDEIPSFLHPSSPYPFLRRAILGQYKNLDKPFCILIDTFQELEKEIIDYMSKLC 237 (480)
T ss_pred ----CCcccccCCCceeecCCCCCcCHhhCcccccCCCCchHHHHHHHHHHHhcccCCEEEEEchHHHhHHHHHHHhhCC
Confidence 011111 112346899999999999976642 223445556666677788999999999999999998886532
Q ss_pred ccCCCCCCCeeEecccccCCcCC-CC-CCC-CCCcchhHHhhcCCCCCceEEeccCCCcCCCHHHHHHHHHHHHhCCCcE
Q 044031 226 CVTNGTTPPLHCIGPLIVDAKDR-AG-GVS-DDVSSDCLTWLDSQPSGSVVFLCFGSRGTFSAPQLKEIAIGLERSNQRF 302 (468)
Q Consensus 226 ~~~~~~~p~~~~VGpl~~~~~~~-~~-~~~-~~~~~~l~~~l~~~~~~~~v~vs~GS~~~~~~~~~~~~~~al~~~~~~~ 302 (468)
| ++.|||++...... .. ... +..+++|.+||+++++++||||||||+...+.+++.+++.+|+.++++|
T Consensus 238 -------~-v~~iGPl~~~~~~~~~~~~~~~~~~~~~~~~wLd~~~~~sVvyvsfGS~~~~~~~q~~ela~~l~~~~~~f 309 (480)
T PLN02555 238 -------P-IKPVGPLFKMAKTPNSDVKGDISKPADDCIEWLDSKPPSSVVYISFGTVVYLKQEQIDEIAYGVLNSGVSF 309 (480)
T ss_pred -------C-EEEeCcccCccccccccccccccccchhHHHHHhCCCCCceeEEEeccccCCCHHHHHHHHHHHHhcCCeE
Confidence 4 99999997532111 10 011 2245789999999988899999999999999999999999999999999
Q ss_pred EEEEeCCCC---ccccCCChhHHhhccCCCeEecCCCCHHhhhCccCcceEEecCCcchHHHHHHhCCcEEecccccchh
Q 044031 303 LWVVRNPSN---AAEAELPEGFLERTKERGLVVKSWAPQSTILGHESVGGFVTHCGWSSVVEAVTYGVPMIAWPLYAEQF 379 (468)
Q Consensus 303 l~~~~~~~~---~~~~~~~~~~~~~~~~~~~~v~~~~pq~~il~~~~~~~~ithgG~~s~~eal~~GvP~v~~P~~~DQ~ 379 (468)
||+++...+ .....+|+++.+++++++.+ .+|+||.+||+|+++++|||||||||++||+++|||||+||+++||+
T Consensus 310 lW~~~~~~~~~~~~~~~lp~~~~~~~~~~g~v-~~W~PQ~~iL~H~~v~~FvtH~G~nS~~Eai~~GVP~l~~P~~~DQ~ 388 (480)
T PLN02555 310 LWVMRPPHKDSGVEPHVLPEEFLEKAGDKGKI-VQWCPQEKVLAHPSVACFVTHCGWNSTMEALSSGVPVVCFPQWGDQV 388 (480)
T ss_pred EEEEecCcccccchhhcCChhhhhhcCCceEE-EecCCHHHHhCCCccCeEEecCCcchHHHHHHcCCCEEeCCCccccH
Confidence 999985311 11235888998887666644 49999999999999999999999999999999999999999999999
Q ss_pred hHHHHHHhhcceeeeeccCCcccccCCCCccccHHHHHHHHHHHhcCchhHHHHHHHHHHHHHHHHhhcCCCCCChHHHH
Q 044031 380 LNSVALVQEMKVAMPMFLNGEEETIGNGEGVVSAERVEERVRELMMGSEGKALRERSLEMRMMAATAWNNNDGGSSFTAF 459 (468)
Q Consensus 380 ~na~~~~~~~g~g~~~~~~~~~~~~~~~~~~~~~~~l~~av~~~l~~~~~~~~~~~a~~l~~~~~~a~~~~~~g~~~~~~ 459 (468)
.||+++++.||+|+.+..+ ....+.+++++|.++|+++|.+++++++|+||++|++.+++|+. +||||++|+
T Consensus 389 ~Na~~~~~~~gvGv~l~~~------~~~~~~v~~~~v~~~v~~vm~~~~g~~~r~ra~~l~~~a~~A~~--egGSS~~~l 460 (480)
T PLN02555 389 TDAVYLVDVFKTGVRLCRG------EAENKLITREEVAECLLEATVGEKAAELKQNALKWKEEAEAAVA--EGGSSDRNF 460 (480)
T ss_pred HHHHHHHHHhCceEEccCC------ccccCcCcHHHHHHHHHHHhcCchHHHHHHHHHHHHHHHHHHhc--CCCcHHHHH
Confidence 9999999999999999521 01123589999999999999888889999999999999999999 999999999
Q ss_pred HHHHHHhh
Q 044031 460 SNLFDLWQ 467 (468)
Q Consensus 460 ~~~~~~~~ 467 (468)
++||++++
T Consensus 461 ~~~v~~i~ 468 (480)
T PLN02555 461 QEFVDKLV 468 (480)
T ss_pred HHHHHHHH
Confidence 99999986
No 9
>PLN02863 UDP-glucoronosyl/UDP-glucosyl transferase family protein
Probab=100.00 E-value=5.4e-70 Score=541.93 Aligned_cols=436 Identities=28% Similarity=0.466 Sum_probs=336.2
Q ss_pred cceEEEecCCCccCHHHHHHHHHHHHhCCCCcEEEEEeCCCCCCchhhhhhhhccccCCCCCeeEEEcCCC---CCCCCC
Q 044031 2 KKTIALYPGPAFHHMISMVELGKLILQHRSDVSITILVPSMPLEESKTCSYINSISHRLNPIISFYYLPAI---QMPSET 78 (468)
Q Consensus 2 ~~~Iv~~~~~~~GHv~P~l~LA~~L~~~G~~h~Vt~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~i~~~---~lp~~~ 78 (468)
++||+++|+|++||++||++||++|+.+| +.|||+++.... ..+.+... ..+++++..++.+ .+|++.
T Consensus 9 ~~HVvl~PfpaqGHi~P~l~LAk~La~~G--~~VTfv~T~~n~--~~~~~~~~-----~~~~i~~~~lp~P~~~~lPdG~ 79 (477)
T PLN02863 9 GTHVLVFPFPAQGHMIPLLDLTHRLALRG--LTITVLVTPKNL--PFLNPLLS-----KHPSIETLVLPFPSHPSIPSGV 79 (477)
T ss_pred CCEEEEecCcccchHHHHHHHHHHHHhCC--CEEEEEeCCCcH--HHHhhhcc-----cCCCeeEEeCCCCCcCCCCCCC
Confidence 47999999999999999999999999999 999999876543 22222111 2236888777643 256655
Q ss_pred CChhHH-------HHHHHHHhhHHHHHHHHhhhcCCCccEEEe----cCcHHHhhhCCCCeEEEecchhHHHHHHHhhhh
Q 044031 79 LSRADI-------AIESIKLNSSNVFQALENISLTSKILSFII----TSTTSFSYHPNIPTYTYFNSCASTLAAILYLPT 147 (468)
Q Consensus 79 ~~~~~~-------~~~~~~~~~~~l~~ll~~~~~~~~pD~vI~----~~~~~vA~~lgIP~i~~~~~~~~~~~~~~~~p~ 147 (468)
++..+. +........+.+.+++++. ..+++|||+ +|+.++|+++|||.+.|++++++.++.+++++.
T Consensus 80 ~~~~~~~~~~~~~~~~a~~~~~~~~~~~l~~~--~~~p~cvI~D~f~~Wa~dVA~e~GIP~~~F~t~sA~~~~~~~~~~~ 157 (477)
T PLN02863 80 ENVKDLPPSGFPLMIHALGELYAPLLSWFRSH--PSPPVAIISDMFLGWTQNLACQLGIRRFVFSPSGAMALSIMYSLWR 157 (477)
T ss_pred cChhhcchhhHHHHHHHHHHhHHHHHHHHHhC--CCCCeEEEEcCchHhHHHHHHHcCCCEEEEeccCHHHHHHHHHHhh
Confidence 433221 2233334455566666553 236799999 999999999999999999999999999887753
Q ss_pred hhhcccCCCCCCCC--ccccCCCCCCCCCCCCCccccC--CCchhHHHHHHHhhhhcccceEEecChhhhhHHHHHHHHc
Q 044031 148 LHNQITSSFKDHPS--SLLFIPGLPPVKSSFMPEPVLD--RQKPIYDFFLNYSTSLSKSNGIIINTFDFLEQQAIKAIVN 223 (468)
Q Consensus 148 ~~~~~~~~~~~~~~--~~~~~pg~~~~~~~~l~~~~~~--~~~~~~~~~~~~~~~~~~~~~~l~~s~~~le~~~~~~~~~ 223 (468)
...... ...+... ....+||++.++..+++..+.. ......+.+.+.......++++++|||++||+.+++.++.
T Consensus 158 ~~~~~~-~~~~~~~~~~~~~iPg~~~~~~~dlp~~~~~~~~~~~~~~~~~~~~~~~~~~~~vlvNTf~eLE~~~~~~~~~ 236 (477)
T PLN02863 158 EMPTKI-NPDDQNEILSFSKIPNCPKYPWWQISSLYRSYVEGDPAWEFIKDSFRANIASWGLVVNSFTELEGIYLEHLKK 236 (477)
T ss_pred cccccc-cccccccccccCCCCCCCCcChHhCchhhhccCccchHHHHHHHHHhhhccCCEEEEecHHHHHHHHHHHHHh
Confidence 211000 0001001 1124789988999999876642 2233444444555555677889999999999999999976
Q ss_pred CcccCCCCCCCeeEecccccCCcCC---CC-CCC-CCCcchhHHhhcCCCCCceEEeccCCCcCCCHHHHHHHHHHHHhC
Q 044031 224 GDCVTNGTTPPLHCIGPLIVDAKDR---AG-GVS-DDVSSDCLTWLDSQPSGSVVFLCFGSRGTFSAPQLKEIAIGLERS 298 (468)
Q Consensus 224 ~~~~~~~~~p~~~~VGpl~~~~~~~---~~-~~~-~~~~~~l~~~l~~~~~~~~v~vs~GS~~~~~~~~~~~~~~al~~~ 298 (468)
.+ + .++++.|||++...... .. ..+ +..+++|.+||+.++++|+|||||||+...+.+++.+++.+|+.+
T Consensus 237 ~~---~--~~~v~~IGPL~~~~~~~~~~~~~~~~~~~~~~~~~~WLd~~~~~svVyvsfGS~~~~~~~~~~ela~gL~~~ 311 (477)
T PLN02863 237 EL---G--HDRVWAVGPILPLSGEKSGLMERGGPSSVSVDDVMTWLDTCEDHKVVYVCFGSQVVLTKEQMEALASGLEKS 311 (477)
T ss_pred hc---C--CCCeEEeCCCcccccccccccccCCcccccHHHHHHHHhcCCCCceEEEEeeceecCCHHHHHHHHHHHHhC
Confidence 42 1 15799999997532100 00 000 112457999999998889999999999999999999999999999
Q ss_pred CCcEEEEEeCCCC--ccccCCChhHHhhccCCCeEecCCCCHHhhhCccCcceEEecCCcchHHHHHHhCCcEEeccccc
Q 044031 299 NQRFLWVVRNPSN--AAEAELPEGFLERTKERGLVVKSWAPQSTILGHESVGGFVTHCGWSSVVEAVTYGVPMIAWPLYA 376 (468)
Q Consensus 299 ~~~~l~~~~~~~~--~~~~~~~~~~~~~~~~~~~~v~~~~pq~~il~~~~~~~~ithgG~~s~~eal~~GvP~v~~P~~~ 376 (468)
+++|||+++...+ .....+|++|.++++++|+++.+|+||.+||+|+++++|||||||||++||+++|||+|+||+++
T Consensus 312 ~~~flw~~~~~~~~~~~~~~lp~~~~~r~~~~g~~v~~w~PQ~~vL~h~~v~~fvtH~G~nS~~Eal~~GvP~l~~P~~~ 391 (477)
T PLN02863 312 GVHFIWCVKEPVNEESDYSNIPSGFEDRVAGRGLVIRGWAPQVAILSHRAVGAFLTHCGWNSVLEGLVAGVPMLAWPMAA 391 (477)
T ss_pred CCcEEEEECCCcccccchhhCCHHHHHHhccCCEEecCCCCHHHHhcCCCcCeEEecCCchHHHHHHHcCCCEEeCCccc
Confidence 9999999985411 12235899999999999999999999999999999999999999999999999999999999999
Q ss_pred chhhHHHHHHhhcceeeeeccCCcccccCCCCccccHHHHHHHHHHHhc-CchhHHHHHHHHHHHHHHHHhhcCCCCCCh
Q 044031 377 EQFLNSVALVQEMKVAMPMFLNGEEETIGNGEGVVSAERVEERVRELMM-GSEGKALRERSLEMRMMAATAWNNNDGGSS 455 (468)
Q Consensus 377 DQ~~na~~~~~~~g~g~~~~~~~~~~~~~~~~~~~~~~~l~~av~~~l~-~~~~~~~~~~a~~l~~~~~~a~~~~~~g~~ 455 (468)
||+.||++++++||+|+.+.. .+.+.++++++.++|+++|. ++ +||+||+++++.+++|+. +||||
T Consensus 392 DQ~~na~~v~~~~gvG~~~~~--------~~~~~~~~~~v~~~v~~~m~~~~---~~r~~a~~l~e~a~~Av~--~gGSS 458 (477)
T PLN02863 392 DQFVNASLLVDELKVAVRVCE--------GADTVPDSDELARVFMESVSENQ---VERERAKELRRAALDAIK--ERGSS 458 (477)
T ss_pred cchhhHHHHHHhhceeEEecc--------CCCCCcCHHHHHHHHHHHhhccH---HHHHHHHHHHHHHHHHhc--cCCcH
Confidence 999999999888999999963 22345799999999999994 44 999999999999999999 99999
Q ss_pred HHHHHHHHHHhh
Q 044031 456 FTAFSNLFDLWQ 467 (468)
Q Consensus 456 ~~~~~~~~~~~~ 467 (468)
++|+++||++++
T Consensus 459 ~~~l~~~v~~i~ 470 (477)
T PLN02863 459 VKDLDGFVKHVV 470 (477)
T ss_pred HHHHHHHHHHHH
Confidence 999999999986
No 10
>PLN02562 UDP-glycosyltransferase
Probab=100.00 E-value=1.8e-69 Score=536.22 Aligned_cols=430 Identities=23% Similarity=0.385 Sum_probs=331.9
Q ss_pred ceEEEecCCCccCHHHHHHHHHHHHhCCCCcEEEEEeCCCCCCchhhhhhhhccccCCCCCeeEEEcCCCCCCCCCCChh
Q 044031 3 KTIALYPGPAFHHMISMVELGKLILQHRSDVSITILVPSMPLEESKTCSYINSISHRLNPIISFYYLPAIQMPSETLSRA 82 (468)
Q Consensus 3 ~~Iv~~~~~~~GHv~P~l~LA~~L~~~G~~h~Vt~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~i~~~~lp~~~~~~~ 82 (468)
+||+++|+|++||++||++||++|+++| +.|||+++..... .+.+... ..++|+++.+|++ ++++.....
T Consensus 7 ~HVVlvPfPaqGHi~PmL~LAk~Las~G--~~VT~vtt~~~~~--~~~~~~~-----~~~~i~~v~lp~g-~~~~~~~~~ 76 (448)
T PLN02562 7 PKIILVPYPAQGHVTPMLKLASAFLSRG--FEPVVITPEFIHR--RISATLD-----PKLGITFMSISDG-QDDDPPRDF 76 (448)
T ss_pred cEEEEEcCccccCHHHHHHHHHHHHhCC--CEEEEEeCcchhh--hhhhccC-----CCCCEEEEECCCC-CCCCccccH
Confidence 5999999999999999999999999999 9999998765332 2222111 1236999999876 544321111
Q ss_pred HHHHHHHH-HhhHHHHHHHHhhhcCCCccEEEe----cCcHHHhhhCCCCeEEEecchhHHHHHHHhhhhhhhcccCCCC
Q 044031 83 DIAIESIK-LNSSNVFQALENISLTSKILSFII----TSTTSFSYHPNIPTYTYFNSCASTLAAILYLPTLHNQITSSFK 157 (468)
Q Consensus 83 ~~~~~~~~-~~~~~l~~ll~~~~~~~~pD~vI~----~~~~~vA~~lgIP~i~~~~~~~~~~~~~~~~p~~~~~~~~~~~ 157 (468)
..+...+. ...+.+.++++++....+++|||+ +|+.++|+++|||.++|++++++.++.+++++.+.........
T Consensus 77 ~~l~~a~~~~~~~~l~~ll~~l~~~~pv~cvI~D~~~~w~~~vA~~~giP~~~f~~~~a~~~~~~~~~~~~~~~~~~~~~ 156 (448)
T PLN02562 77 FSIENSMENTMPPQLERLLHKLDEDGEVACMVVDLLASWAIGVADRCGVPVAGFWPVMLAAYRLIQAIPELVRTGLISET 156 (448)
T ss_pred HHHHHHHHHhchHHHHHHHHHhcCCCCcEEEEECCccHhHHHHHHHhCCCEEEEechhHHHHHHHHHHHHHhhccccccc
Confidence 01222333 456777888877643234589999 9999999999999999999999998888777665432211111
Q ss_pred CC---CCccccCCCCCCCCCCCCCccccCC--CchhHHHHHHHhhhhcccceEEecChhhhhHHHHHHHHcCcccCCCCC
Q 044031 158 DH---PSSLLFIPGLPPVKSSFMPEPVLDR--QKPIYDFFLNYSTSLSKSNGIIINTFDFLEQQAIKAIVNGDCVTNGTT 232 (468)
Q Consensus 158 ~~---~~~~~~~pg~~~~~~~~l~~~~~~~--~~~~~~~~~~~~~~~~~~~~~l~~s~~~le~~~~~~~~~~~~~~~~~~ 232 (468)
+. ......+||+|.++..+++..+... ....+..+.+..+...+++++++|||++||+.++..+..... .+..
T Consensus 157 ~~~~~~~~~~~~Pg~~~l~~~dl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~vlvNTf~eLE~~~~~~~~~~~~--~~~~ 234 (448)
T PLN02562 157 GCPRQLEKICVLPEQPLLSTEDLPWLIGTPKARKARFKFWTRTLERTKSLRWILMNSFKDEEYDDVKNHQASYN--NGQN 234 (448)
T ss_pred cccccccccccCCCCCCCChhhCcchhcCCCcchHHHHHHHHHHhccccCCEEEEcChhhhCHHHHHHHHhhhc--cccC
Confidence 10 0112258999889999998766433 233456666667777888999999999999988887654221 0113
Q ss_pred CCeeEecccccCCcCCC-CCCCCCCcchhHHhhcCCCCCceEEeccCCCc-CCCHHHHHHHHHHHHhCCCcEEEEEeCCC
Q 044031 233 PPLHCIGPLIVDAKDRA-GGVSDDVSSDCLTWLDSQPSGSVVFLCFGSRG-TFSAPQLKEIAIGLERSNQRFLWVVRNPS 310 (468)
Q Consensus 233 p~~~~VGpl~~~~~~~~-~~~~~~~~~~l~~~l~~~~~~~~v~vs~GS~~-~~~~~~~~~~~~al~~~~~~~l~~~~~~~ 310 (468)
|+++.|||++....... ....+..+.+|.+||++++++|+|||||||+. ..+.+++.+++.+|+.++++|||+++..
T Consensus 235 ~~v~~iGpl~~~~~~~~~~~~~~~~~~~c~~wLd~~~~~svvyvsfGS~~~~~~~~~~~~l~~~l~~~g~~fiW~~~~~- 313 (448)
T PLN02562 235 PQILQIGPLHNQEATTITKPSFWEEDMSCLGWLQEQKPNSVIYISFGSWVSPIGESNVRTLALALEASGRPFIWVLNPV- 313 (448)
T ss_pred CCEEEecCcccccccccCCCccccchHHHHHHHhcCCCCceEEEEecccccCCCHHHHHHHHHHHHHCCCCEEEEEcCC-
Confidence 78999999986432100 01001234568899999988899999999986 6789999999999999999999999753
Q ss_pred CccccCCChhHHhhccCCCeEecCCCCHHhhhCccCcceEEecCCcchHHHHHHhCCcEEecccccchhhHHHHHHhhcc
Q 044031 311 NAAEAELPEGFLERTKERGLVVKSWAPQSTILGHESVGGFVTHCGWSSVVEAVTYGVPMIAWPLYAEQFLNSVALVQEMK 390 (468)
Q Consensus 311 ~~~~~~~~~~~~~~~~~~~~~v~~~~pq~~il~~~~~~~~ithgG~~s~~eal~~GvP~v~~P~~~DQ~~na~~~~~~~g 390 (468)
....+|++|.++..+++ .+.+|+||.+||+|+++++|||||||||++||+++|||+|+||+++||+.||+++++.+|
T Consensus 314 --~~~~l~~~~~~~~~~~~-~v~~w~PQ~~iL~h~~v~~fvtH~G~nS~~Eal~~GvP~l~~P~~~DQ~~na~~~~~~~g 390 (448)
T PLN02562 314 --WREGLPPGYVERVSKQG-KVVSWAPQLEVLKHQAVGCYLTHCGWNSTMEAIQCQKRLLCYPVAGDQFVNCAYIVDVWK 390 (448)
T ss_pred --chhhCCHHHHHHhccCE-EEEecCCHHHHhCCCccceEEecCcchhHHHHHHcCCCEEeCCcccchHHHHHHHHHHhC
Confidence 12348889988876555 555999999999999999999999999999999999999999999999999999987789
Q ss_pred eeeeeccCCcccccCCCCccccHHHHHHHHHHHhcCchhHHHHHHHHHHHHHHHHhhcCCCCCChHHHHHHHHHHhh
Q 044031 391 VAMPMFLNGEEETIGNGEGVVSAERVEERVRELMMGSEGKALRERSLEMRMMAATAWNNNDGGSSFTAFSNLFDLWQ 467 (468)
Q Consensus 391 ~g~~~~~~~~~~~~~~~~~~~~~~~l~~av~~~l~~~~~~~~~~~a~~l~~~~~~a~~~~~~g~~~~~~~~~~~~~~ 467 (468)
+|+.+. + ++.++|+++|+++|+|+ +||+||+++++.++++ . +||||++||++||+++|
T Consensus 391 ~g~~~~----------~---~~~~~l~~~v~~~l~~~---~~r~~a~~l~~~~~~~-~--~gGSS~~nl~~~v~~~~ 448 (448)
T PLN02562 391 IGVRIS----------G---FGQKEVEEGLRKVMEDS---GMGERLMKLRERAMGE-E--ARLRSMMNFTTLKDELK 448 (448)
T ss_pred ceeEeC----------C---CCHHHHHHHHHHHhCCH---HHHHHHHHHHHHHHhc-C--CCCCHHHHHHHHHHHhC
Confidence 998885 2 89999999999999988 8999999999998887 6 78999999999999986
No 11
>PLN02554 UDP-glycosyltransferase family protein
Probab=100.00 E-value=1.2e-69 Score=543.58 Aligned_cols=451 Identities=34% Similarity=0.568 Sum_probs=337.1
Q ss_pred CcceEEEecCCCccCHHHHHHHHHHHHhCCCCcEEEEEeCCCCCCchh-hhhhhhccccCCCCCeeEEEcCCCCCCCCCC
Q 044031 1 MKKTIALYPGPAFHHMISMVELGKLILQHRSDVSITILVPSMPLEESK-TCSYINSISHRLNPIISFYYLPAIQMPSETL 79 (468)
Q Consensus 1 m~~~Iv~~~~~~~GHv~P~l~LA~~L~~~G~~h~Vt~~~~~~~~~~~~-~~~~~~~~~~~~~~~i~~~~i~~~~lp~~~~ 79 (468)
||+||+++|+|++||++||++||++|+.+|.+..|||+++........ ...++.+......++|+++.+|++..++. .
T Consensus 1 ~~~hvvl~P~paqGHi~P~l~LAk~La~~G~~~~vT~v~t~~~~~~~~~~~~~~~~~~~~~~~~i~~~~lp~~~~~~~-~ 79 (481)
T PLN02554 1 MKIELVFIPSPGIGHLRPTVELAKLLVDSDDRLSITVIIIPSRSGDDASSSAYIASLSASSEDRLRYEVISAGDQPTT-E 79 (481)
T ss_pred CceEEEEeCCcchhhHHHHHHHHHHHHhCCCCEEEEEEeCCCccchhhhhhhhhhhcccCCCCCeEEEEcCCCCCCcc-c
Confidence 999999999999999999999999999997346799998765432110 01122221100134699999987732221 1
Q ss_pred ChhHHHHHHHHHhhHHHHHHHHhhhc-----C-CCccEEEe----cCcHHHhhhCCCCeEEEecchhHHHHHHHhhhhhh
Q 044031 80 SRADIAIESIKLNSSNVFQALENISL-----T-SKILSFII----TSTTSFSYHPNIPTYTYFNSCASTLAAILYLPTLH 149 (468)
Q Consensus 80 ~~~~~~~~~~~~~~~~l~~ll~~~~~-----~-~~pD~vI~----~~~~~vA~~lgIP~i~~~~~~~~~~~~~~~~p~~~ 149 (468)
.. .+..++....+.+++.++++.. + .+.+|||+ +|+.++|+++|||++.|++++++.++.+++++...
T Consensus 80 ~~--~~~~~~~~~~~~~~~~l~~l~~~~~~~~~~pv~cvV~D~f~~wa~dvA~~lgIP~~~F~t~sa~~~~~~~~~~~~~ 157 (481)
T PLN02554 80 DP--TFQSYIDNQKPKVRDAVAKLVDDSSTPSSPRLAGFVVDMFCTSMIDVANEFGVPSYMFYTSNATFLGLQLHVQMLY 157 (481)
T ss_pred ch--HHHHHHHHHHHHHHHHHHHHHhhhccCCCCCeEEEEECCcchhHHHHHHHhCCCEEEEeCCcHHHHHHHHhhhhhc
Confidence 11 2223344455566666665532 1 22489999 99999999999999999999999999998887654
Q ss_pred hcccCCCCCC--CCccccCCCCC-CCCCCCCCccccCCCchhHHHHHHHhhhhcccceEEecChhhhhHHHHHHHHcCcc
Q 044031 150 NQITSSFKDH--PSSLLFIPGLP-PVKSSFMPEPVLDRQKPIYDFFLNYSTSLSKSNGIIINTFDFLEQQAIKAIVNGDC 226 (468)
Q Consensus 150 ~~~~~~~~~~--~~~~~~~pg~~-~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~s~~~le~~~~~~~~~~~~ 226 (468)
......+.+. ...+..+||++ +++..+++..+.++ ..+..+.+....+.+++++++|||++||..++..+.+...
T Consensus 158 ~~~~~~~~~~~~~~~~v~iPgl~~pl~~~dlp~~~~~~--~~~~~~~~~~~~~~~~~gvlvNt~~eLe~~~~~~l~~~~~ 235 (481)
T PLN02554 158 DEKKYDVSELEDSEVELDVPSLTRPYPVKCLPSVLLSK--EWLPLFLAQARRFREMKGILVNTVAELEPQALKFFSGSSG 235 (481)
T ss_pred cccccCccccCCCCceeECCCCCCCCCHHHCCCcccCH--HHHHHHHHHHHhcccCCEEEEechHHHhHHHHHHHHhccc
Confidence 3211111111 11234589984 78888888766432 3345556666778889999999999999999988876310
Q ss_pred cCCCCCCCeeEecccccCCcCCCCCCCCCCcchhHHhhcCCCCCceEEeccCCCcCCCHHHHHHHHHHHHhCCCcEEEEE
Q 044031 227 VTNGTTPPLHCIGPLIVDAKDRAGGVSDDVSSDCLTWLDSQPSGSVVFLCFGSRGTFSAPQLKEIAIGLERSNQRFLWVV 306 (468)
Q Consensus 227 ~~~~~~p~~~~VGpl~~~~~~~~~~~~~~~~~~l~~~l~~~~~~~~v~vs~GS~~~~~~~~~~~~~~al~~~~~~~l~~~ 306 (468)
..|+++.|||++....... ......+.+|.+||+++++++||||||||+...+.+++.+++.+|+.++++|||++
T Consensus 236 ----~~~~v~~vGpl~~~~~~~~-~~~~~~~~~~~~wLd~~~~~svvyvsfGS~~~~~~~~~~~la~~l~~~~~~flW~~ 310 (481)
T PLN02554 236 ----DLPPVYPVGPVLHLENSGD-DSKDEKQSEILRWLDEQPPKSVVFLCFGSMGGFSEEQAREIAIALERSGHRFLWSL 310 (481)
T ss_pred ----CCCCEEEeCCCcccccccc-ccccccchHHHHHHhcCCCCcEEEEeccccccCCHHHHHHHHHHHHHcCCCeEEEE
Confidence 1278999999943221011 00011557899999999888899999999998999999999999999999999999
Q ss_pred eCCCC-----------ccccCCChhHHhhccCCCeEecCCCCHHhhhCccCcceEEecCCcchHHHHHHhCCcEEecccc
Q 044031 307 RNPSN-----------AAEAELPEGFLERTKERGLVVKSWAPQSTILGHESVGGFVTHCGWSSVVEAVTYGVPMIAWPLY 375 (468)
Q Consensus 307 ~~~~~-----------~~~~~~~~~~~~~~~~~~~~v~~~~pq~~il~~~~~~~~ithgG~~s~~eal~~GvP~v~~P~~ 375 (468)
++... +....+|++|.+|+.++++++ +|+||.+||+|+++++|||||||||++||+++|||||+||++
T Consensus 311 ~~~~~~~~~~~~~~~~~~~~~lp~~~~~r~~~~g~v~-~W~PQ~~iL~H~~v~~FvtH~G~nS~~Ea~~~GVP~l~~P~~ 389 (481)
T PLN02554 311 RRASPNIMKEPPGEFTNLEEILPEGFLDRTKDIGKVI-GWAPQVAVLAKPAIGGFVTHCGWNSILESLWFGVPMAAWPLY 389 (481)
T ss_pred cCCcccccccccccccchhhhCChHHHHHhccCceEE-eeCCHHHHhCCcccCcccccCccchHHHHHHcCCCEEecCcc
Confidence 86310 011236899999987777555 999999999999999999999999999999999999999999
Q ss_pred cchhhHHHHHHhhcceeeeeccCCcccccCCCCccccHHHHHHHHHHHhc-CchhHHHHHHHHHHHHHHHHhhcCCCCCC
Q 044031 376 AEQFLNSVALVQEMKVAMPMFLNGEEETIGNGEGVVSAERVEERVRELMM-GSEGKALRERSLEMRMMAATAWNNNDGGS 454 (468)
Q Consensus 376 ~DQ~~na~~~~~~~g~g~~~~~~~~~~~~~~~~~~~~~~~l~~av~~~l~-~~~~~~~~~~a~~l~~~~~~a~~~~~~g~ 454 (468)
+||+.||+++++.+|+|+.++....++....+.+.+++++|+++|+++|+ |+ +||+||+++++.+++|+. +|||
T Consensus 390 ~DQ~~Na~~~v~~~g~Gv~l~~~~~~~~~~~~~~~~~~e~l~~av~~vm~~~~---~~r~~a~~l~~~~~~av~--~gGs 464 (481)
T PLN02554 390 AEQKFNAFEMVEELGLAVEIRKYWRGDLLAGEMETVTAEEIERGIRCLMEQDS---DVRKRVKEMSEKCHVALM--DGGS 464 (481)
T ss_pred ccchhhHHHHHHHhCceEEeeccccccccccccCeEcHHHHHHHHHHHhcCCH---HHHHHHHHHHHHHHHHhc--CCCh
Confidence 99999997766788999998620000000001235899999999999996 55 899999999999999999 9999
Q ss_pred hHHHHHHHHHHhh
Q 044031 455 SFTAFSNLFDLWQ 467 (468)
Q Consensus 455 ~~~~~~~~~~~~~ 467 (468)
|++|+++||++++
T Consensus 465 s~~~l~~lv~~~~ 477 (481)
T PLN02554 465 SHTALKKFIQDVT 477 (481)
T ss_pred HHHHHHHHHHHHH
Confidence 9999999999986
No 12
>PLN02210 UDP-glucosyl transferase
Probab=100.00 E-value=1.8e-69 Score=536.66 Aligned_cols=430 Identities=23% Similarity=0.382 Sum_probs=329.4
Q ss_pred cceEEEecCCCccCHHHHHHHHHH--HHhCCCCcEEEEEeCCCCCCchhhhhhhhccccCCCCCeeEEEcCCCCCCCCCC
Q 044031 2 KKTIALYPGPAFHHMISMVELGKL--ILQHRSDVSITILVPSMPLEESKTCSYINSISHRLNPIISFYYLPAIQMPSETL 79 (468)
Q Consensus 2 ~~~Iv~~~~~~~GHv~P~l~LA~~--L~~~G~~h~Vt~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~i~~~~lp~~~~ 79 (468)
++||+++|+|++||++|+++||++ |+++| ++|||+++..... .+.+. . . ..+.+++..++++ +|++.+
T Consensus 8 ~~hvv~~P~pa~GHi~P~l~La~~L~L~~~G--~~VT~v~t~~~~~--~~~~~-~---~-~~~~~~~~~~~~g-lp~~~~ 77 (456)
T PLN02210 8 ETHVLMVTLAFQGHINPMLKLAKHLSLSSKN--LHFTLATTEQARD--LLSTV-E---K-PRRPVDLVFFSDG-LPKDDP 77 (456)
T ss_pred CCEEEEeCCcccccHHHHHHHHHHHHhhcCC--cEEEEEeccchhh--hhccc-c---C-CCCceEEEECCCC-CCCCcc
Confidence 369999999999999999999999 56999 9999998765432 22111 1 0 2235788777765 776542
Q ss_pred C-hhHHHHHHHHHhhHHHHHHHHhhhcCCCccEEEe----cCcHHHhhhCCCCeEEEecchhHHHHHHHhhhhhhhcccC
Q 044031 80 S-RADIAIESIKLNSSNVFQALENISLTSKILSFII----TSTTSFSYHPNIPTYTYFNSCASTLAAILYLPTLHNQITS 154 (468)
Q Consensus 80 ~-~~~~~~~~~~~~~~~l~~ll~~~~~~~~pD~vI~----~~~~~vA~~lgIP~i~~~~~~~~~~~~~~~~p~~~~~~~~ 154 (468)
. ...++..+.....+.+++++++. ++||||+ +|+..+|+++|||.+.|++++++.++.+++.+.... ..
T Consensus 78 ~~~~~~~~~~~~~~~~~l~~~l~~~----~~~~vI~D~~~~w~~~vA~~lgIP~~~f~~~sa~~~~~~~~~~~~~~--~~ 151 (456)
T PLN02210 78 RAPETLLKSLNKVGAKNLSKIIEEK----RYSCIISSPFTPWVPAVAAAHNIPCAILWIQACGAYSVYYRYYMKTN--SF 151 (456)
T ss_pred cCHHHHHHHHHHhhhHHHHHHHhcC----CCcEEEECCcchhHHHHHHHhCCCEEEEecccHHHHHHHHhhhhccC--CC
Confidence 2 22222222334445555555553 8999999 899999999999999999999999888776543111 11
Q ss_pred CCCCCCCccccCCCCCCCCCCCCCccccCCCchhHHHHH-HHhhhhcccceEEecChhhhhHHHHHHHHcCcccCCCCCC
Q 044031 155 SFKDHPSSLLFIPGLPPVKSSFMPEPVLDRQKPIYDFFL-NYSTSLSKSNGIIINTFDFLEQQAIKAIVNGDCVTNGTTP 233 (468)
Q Consensus 155 ~~~~~~~~~~~~pg~~~~~~~~l~~~~~~~~~~~~~~~~-~~~~~~~~~~~~l~~s~~~le~~~~~~~~~~~~~~~~~~p 233 (468)
+..........+||+++++..+++..+.......+.... +......+++++++|||++||+.+++.++. . +
T Consensus 152 ~~~~~~~~~~~~Pgl~~~~~~dl~~~~~~~~~~~~~~~~~~~~~~~~~~~~vlvNTf~eLE~~~~~~l~~-~-------~ 223 (456)
T PLN02210 152 PDLEDLNQTVELPALPLLEVRDLPSFMLPSGGAHFNNLMAEFADCLRYVKWVLVNSFYELESEIIESMAD-L-------K 223 (456)
T ss_pred CcccccCCeeeCCCCCCCChhhCChhhhcCCchHHHHHHHHHHHhcccCCEEEEeCHHHHhHHHHHHHhh-c-------C
Confidence 110101123458999888888988766554433333333 333455677899999999999999988865 2 5
Q ss_pred CeeEecccccCC---cCC----CC-CCC-CCCcchhHHhhcCCCCCceEEeccCCCcCCCHHHHHHHHHHHHhCCCcEEE
Q 044031 234 PLHCIGPLIVDA---KDR----AG-GVS-DDVSSDCLTWLDSQPSGSVVFLCFGSRGTFSAPQLKEIAIGLERSNQRFLW 304 (468)
Q Consensus 234 ~~~~VGpl~~~~---~~~----~~-~~~-~~~~~~l~~~l~~~~~~~~v~vs~GS~~~~~~~~~~~~~~al~~~~~~~l~ 304 (468)
++++|||++... ..+ .. ..+ |..+++|.+||++++++|+|||||||....+.+++.+++.+|+.++++|||
T Consensus 224 ~v~~VGPl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~wld~~~~~svvyvsfGS~~~~~~~~~~e~a~~l~~~~~~flw 303 (456)
T PLN02210 224 PVIPIGPLVSPFLLGDDEEETLDGKNLDMCKSDDCCMEWLDKQARSSVVYISFGSMLESLENQVETIAKALKNRGVPFLW 303 (456)
T ss_pred CEEEEcccCchhhcCcccccccccccccccccchHHHHHHhCCCCCceEEEEecccccCCHHHHHHHHHHHHhCCCCEEE
Confidence 799999997421 101 00 001 234567999999998889999999999988999999999999999999999
Q ss_pred EEeCCCCccccCCChhHHhhcc-CCCeEecCCCCHHhhhCccCcceEEecCCcchHHHHHHhCCcEEecccccchhhHHH
Q 044031 305 VVRNPSNAAEAELPEGFLERTK-ERGLVVKSWAPQSTILGHESVGGFVTHCGWSSVVEAVTYGVPMIAWPLYAEQFLNSV 383 (468)
Q Consensus 305 ~~~~~~~~~~~~~~~~~~~~~~-~~~~~v~~~~pq~~il~~~~~~~~ithgG~~s~~eal~~GvP~v~~P~~~DQ~~na~ 383 (468)
+++... ....++.+.++.. ++++ +.+|+||.+||+|+++++|||||||||++||+++|||||+||+++||+.||+
T Consensus 304 ~~~~~~---~~~~~~~~~~~~~~~~g~-v~~w~PQ~~iL~h~~vg~FitH~G~nS~~Eai~~GVP~v~~P~~~DQ~~na~ 379 (456)
T PLN02210 304 VIRPKE---KAQNVQVLQEMVKEGQGV-VLEWSPQEKILSHMAISCFVTHCGWNSTIETVVAGVPVVAYPSWTDQPIDAR 379 (456)
T ss_pred EEeCCc---cccchhhHHhhccCCCeE-EEecCCHHHHhcCcCcCeEEeeCCcccHHHHHHcCCCEEecccccccHHHHH
Confidence 998541 1123455666663 5565 4599999999999999999999999999999999999999999999999999
Q ss_pred HHHhhcceeeeeccCCcccccCCCCccccHHHHHHHHHHHhcCchhHHHHHHHHHHHHHHHHhhcCCCCCChHHHHHHHH
Q 044031 384 ALVQEMKVAMPMFLNGEEETIGNGEGVVSAERVEERVRELMMGSEGKALRERSLEMRMMAATAWNNNDGGSSFTAFSNLF 463 (468)
Q Consensus 384 ~~~~~~g~g~~~~~~~~~~~~~~~~~~~~~~~l~~av~~~l~~~~~~~~~~~a~~l~~~~~~a~~~~~~g~~~~~~~~~~ 463 (468)
++++.||+|+.+.. ...++.+++++|+++|+++|.++++++||+||+++++.+++|++ +||||++||++||
T Consensus 380 ~~~~~~g~G~~l~~-------~~~~~~~~~~~l~~av~~~m~~~~g~~~r~~a~~l~~~a~~Av~--~gGSS~~~l~~~v 450 (456)
T PLN02210 380 LLVDVFGIGVRMRN-------DAVDGELKVEEVERCIEAVTEGPAAADIRRRAAELKHVARLALA--PGGSSARNLDLFI 450 (456)
T ss_pred HHHHHhCeEEEEec-------cccCCcCCHHHHHHHHHHHhcCchHHHHHHHHHHHHHHHHHHhc--CCCcHHHHHHHHH
Confidence 99877899999963 11134599999999999999988788999999999999999999 9999999999999
Q ss_pred HHhhC
Q 044031 464 DLWQI 468 (468)
Q Consensus 464 ~~~~~ 468 (468)
++++|
T Consensus 451 ~~~~~ 455 (456)
T PLN02210 451 SDITI 455 (456)
T ss_pred HHHhc
Confidence 99986
No 13
>PLN02152 indole-3-acetate beta-glucosyltransferase
Probab=100.00 E-value=3.4e-69 Score=530.86 Aligned_cols=426 Identities=25% Similarity=0.374 Sum_probs=331.6
Q ss_pred Cc-ceEEEecCCCccCHHHHHHHHHHHHh-CCCCcEEEEEeCCCCCCchhhhhhhhccccCCCCCeeEEEcCCCCCCCCC
Q 044031 1 MK-KTIALYPGPAFHHMISMVELGKLILQ-HRSDVSITILVPSMPLEESKTCSYINSISHRLNPIISFYYLPAIQMPSET 78 (468)
Q Consensus 1 m~-~~Iv~~~~~~~GHv~P~l~LA~~L~~-~G~~h~Vt~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~i~~~~lp~~~ 78 (468)
|. +||+++|+|++||++|+++||++|++ +| +.|||+++..... +....... ..++++|..++++ +|++.
T Consensus 1 ~~~~hvv~~P~p~qGHi~P~l~La~~La~~~G--~~vT~v~t~~~~~----~~~~~~~~--~~~~i~~~~i~dg-lp~g~ 71 (455)
T PLN02152 1 MAPPHFLLVTFPAQGHVNPSLRFARRLIKTTG--TRVTFATCLSVIH----RSMIPNHN--NVENLSFLTFSDG-FDDGV 71 (455)
T ss_pred CCCcEEEEecCcccccHHHHHHHHHHHhhCCC--cEEEEEeccchhh----hhhhccCC--CCCCEEEEEcCCC-CCCcc
Confidence 54 49999999999999999999999996 79 9999998763211 11111111 2236999999865 77653
Q ss_pred CC-h---hHHHHHHHHHhhHHHHHHHHhhhc-CCCccEEEe----cCcHHHhhhCCCCeEEEecchhHHHHHHHhhhhhh
Q 044031 79 LS-R---ADIAIESIKLNSSNVFQALENISL-TSKILSFII----TSTTSFSYHPNIPTYTYFNSCASTLAAILYLPTLH 149 (468)
Q Consensus 79 ~~-~---~~~~~~~~~~~~~~l~~ll~~~~~-~~~pD~vI~----~~~~~vA~~lgIP~i~~~~~~~~~~~~~~~~p~~~ 149 (468)
.. . ...+........+.+.++++++.. ..+++|||+ +|+.++|+++|||.+.|++++++.++.+++++...
T Consensus 72 ~~~~~~~~~~~~~~~~~~~~~l~~~l~~l~~~~~pv~ciV~D~~~~wa~dvA~~lgIP~~~f~t~~a~~~~~~~~~~~~~ 151 (455)
T PLN02152 72 ISNTDDVQNRLVNFERNGDKALSDFIEANLNGDSPVTCLIYTILPNWAPKVARRFHLPSVLLWIQPAFVFDIYYNYSTGN 151 (455)
T ss_pred ccccccHHHHHHHHHHhccHHHHHHHHHhhccCCCceEEEECCccHhHHHHHHHhCCCEEEEECccHHHHHHHHHhhccC
Confidence 21 1 122444445567788888887643 245699999 99999999999999999999999999887664210
Q ss_pred hcccCCCCCCCCccccCCCCCCCCCCCCCccccCC--CchhHHHHHHHhhhhcc--cceEEecChhhhhHHHHHHHHcCc
Q 044031 150 NQITSSFKDHPSSLLFIPGLPPVKSSFMPEPVLDR--QKPIYDFFLNYSTSLSK--SNGIIINTFDFLEQQAIKAIVNGD 225 (468)
Q Consensus 150 ~~~~~~~~~~~~~~~~~pg~~~~~~~~l~~~~~~~--~~~~~~~~~~~~~~~~~--~~~~l~~s~~~le~~~~~~~~~~~ 225 (468)
.....+||+|+++.+++|..+... .......+.+......+ ++++++|||++||+.+++.+..
T Consensus 152 -----------~~~~~iPglp~l~~~dlp~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~vlvNTf~eLE~~~~~~l~~-- 218 (455)
T PLN02152 152 -----------NSVFEFPNLPSLEIRDLPSFLSPSNTNKAAQAVYQELMEFLKEESNPKILVNTFDSLEPEFLTAIPN-- 218 (455)
T ss_pred -----------CCeeecCCCCCCchHHCchhhcCCCCchhHHHHHHHHHHHhhhccCCEEEEeChHHhhHHHHHhhhc--
Confidence 123468999988899999876432 22334444444444432 4689999999999999988843
Q ss_pred ccCCCCCCCeeEecccccCCc--C-C-CCCCC-CCCcchhHHhhcCCCCCceEEeccCCCcCCCHHHHHHHHHHHHhCCC
Q 044031 226 CVTNGTTPPLHCIGPLIVDAK--D-R-AGGVS-DDVSSDCLTWLDSQPSGSVVFLCFGSRGTFSAPQLKEIAIGLERSNQ 300 (468)
Q Consensus 226 ~~~~~~~p~~~~VGpl~~~~~--~-~-~~~~~-~~~~~~l~~~l~~~~~~~~v~vs~GS~~~~~~~~~~~~~~al~~~~~ 300 (468)
.+++.|||++.... . . ..... +..+.+|.+|||++++++||||||||+...+.+++.+++.+|+.+++
T Consensus 219 -------~~v~~VGPL~~~~~~~~~~~~~~~~~~~~~~~~~~wLd~~~~~sVvyvsfGS~~~l~~~q~~ela~gL~~s~~ 291 (455)
T PLN02152 219 -------IEMVAVGPLLPAEIFTGSESGKDLSVRDQSSSYTLWLDSKTESSVIYVSFGTMVELSKKQIEELARALIEGKR 291 (455)
T ss_pred -------CCEEEEcccCccccccccccCccccccccchHHHHHhhCCCCCceEEEEecccccCCHHHHHHHHHHHHHcCC
Confidence 36999999975321 0 0 00001 11345799999999888999999999999999999999999999999
Q ss_pred cEEEEEeCCCC------cc-cc--CCChhHHhhccCCCeEecCCCCHHhhhCccCcceEEecCCcchHHHHHHhCCcEEe
Q 044031 301 RFLWVVRNPSN------AA-EA--ELPEGFLERTKERGLVVKSWAPQSTILGHESVGGFVTHCGWSSVVEAVTYGVPMIA 371 (468)
Q Consensus 301 ~~l~~~~~~~~------~~-~~--~~~~~~~~~~~~~~~~v~~~~pq~~il~~~~~~~~ithgG~~s~~eal~~GvP~v~ 371 (468)
+|||+++...+ .. .. .+|++|.++.+++++++ +|+||.+||+|+++++|||||||||++||+++|||+|+
T Consensus 292 ~flWv~r~~~~~~~~~~~~~~~~~~~~~~f~e~~~~~g~v~-~W~PQ~~iL~h~~vg~fvtH~G~nS~~Ea~~~GvP~l~ 370 (455)
T PLN02152 292 PFLWVITDKLNREAKIEGEEETEIEKIAGFRHELEEVGMIV-SWCSQIEVLRHRAVGCFVTHCGWSSSLESLVLGVPVVA 370 (455)
T ss_pred CeEEEEecCcccccccccccccccccchhHHHhccCCeEEE-eeCCHHHHhCCcccceEEeeCCcccHHHHHHcCCCEEe
Confidence 99999986311 01 11 24789988887666555 99999999999999999999999999999999999999
Q ss_pred cccccchhhHHHHHHhhcceeeeeccCCcccccCCCCccccHHHHHHHHHHHhcCchhHHHHHHHHHHHHHHHHhhcCCC
Q 044031 372 WPLYAEQFLNSVALVQEMKVAMPMFLNGEEETIGNGEGVVSAERVEERVRELMMGSEGKALRERSLEMRMMAATAWNNND 451 (468)
Q Consensus 372 ~P~~~DQ~~na~~~~~~~g~g~~~~~~~~~~~~~~~~~~~~~~~l~~av~~~l~~~~~~~~~~~a~~l~~~~~~a~~~~~ 451 (468)
||+++||+.||+++++.||+|+.+.. .+++.+++++|+++|+++|+|+ +++||+||+++++.+++|+. +
T Consensus 371 ~P~~~DQ~~na~~~~~~~~~G~~~~~--------~~~~~~~~e~l~~av~~vm~~~-~~~~r~~a~~~~~~~~~a~~--~ 439 (455)
T PLN02152 371 FPMWSDQPANAKLLEEIWKTGVRVRE--------NSEGLVERGEIRRCLEAVMEEK-SVELRESAEKWKRLAIEAGG--E 439 (455)
T ss_pred ccccccchHHHHHHHHHhCceEEeec--------CcCCcCcHHHHHHHHHHHHhhh-HHHHHHHHHHHHHHHHHHHc--C
Confidence 99999999999999988889988863 2234579999999999999754 66799999999999999999 9
Q ss_pred CCChHHHHHHHHHHhh
Q 044031 452 GGSSFTAFSNLFDLWQ 467 (468)
Q Consensus 452 ~g~~~~~~~~~~~~~~ 467 (468)
||||++|+++||++++
T Consensus 440 ggsS~~nl~~li~~i~ 455 (455)
T PLN02152 440 GGSSDKNVEAFVKTLC 455 (455)
T ss_pred CCcHHHHHHHHHHHhC
Confidence 9999999999999985
No 14
>PLN02208 glycosyltransferase family protein
Probab=100.00 E-value=4.9e-69 Score=530.17 Aligned_cols=413 Identities=23% Similarity=0.344 Sum_probs=319.0
Q ss_pred cceEEEecCCCccCHHHHHHHHHHHHhCCCCcEEEEEeCCCCCCchhhhhhhhccccCCCCCeeEEEcCCC---CCCCCC
Q 044031 2 KKTIALYPGPAFHHMISMVELGKLILQHRSDVSITILVPSMPLEESKTCSYINSISHRLNPIISFYYLPAI---QMPSET 78 (468)
Q Consensus 2 ~~~Iv~~~~~~~GHv~P~l~LA~~L~~~G~~h~Vt~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~i~~~---~lp~~~ 78 (468)
++||+++|+|++||++|+++||++|+++| |+|||+++..... .+.+ ... ...++++..++.+ .+|++.
T Consensus 4 ~~hvv~~P~paqGHi~P~l~LAk~La~~G--~~VT~vtt~~~~~--~i~~----~~a-~~~~i~~~~l~~p~~dgLp~g~ 74 (442)
T PLN02208 4 KFHAFMFPWFAFGHMIPFLHLANKLAEKG--HRVTFLLPKKAQK--QLEH----HNL-FPDSIVFHPLTIPPVNGLPAGA 74 (442)
T ss_pred CCEEEEecCccccHHHHHHHHHHHHHhCC--CEEEEEeccchhh--hhhc----ccC-CCCceEEEEeCCCCccCCCCCc
Confidence 57999999999999999999999999999 9999998654322 1211 110 1225667666432 366654
Q ss_pred CChhHH-------HHHHHHHhhHHHHHHHHhhhcCCCccEEEe---cCcHHHhhhCCCCeEEEecchhHHHHHHHhhhhh
Q 044031 79 LSRADI-------AIESIKLNSSNVFQALENISLTSKILSFII---TSTTSFSYHPNIPTYTYFNSCASTLAAILYLPTL 148 (468)
Q Consensus 79 ~~~~~~-------~~~~~~~~~~~l~~ll~~~~~~~~pD~vI~---~~~~~vA~~lgIP~i~~~~~~~~~~~~~~~~p~~ 148 (468)
+..... +........+.++++++.+ ++||||+ .|+.++|+++|||++.|++++++.++ +++++.
T Consensus 75 ~~~~~l~~~l~~~~~~~~~~~~~~l~~~L~~~----~~~cVV~D~~~wa~~vA~e~giP~~~f~~~~a~~~~-~~~~~~- 148 (442)
T PLN02208 75 ETTSDIPISMDNLLSEALDLTRDQVEAAVRAL----RPDLIFFDFAQWIPEMAKEHMIKSVSYIIVSATTIA-HTHVPG- 148 (442)
T ss_pred ccccchhHHHHHHHHHHHHHHHHHHHHHHhhC----CCeEEEECCcHhHHHHHHHhCCCEEEEEhhhHHHHH-HHccCc-
Confidence 422111 2222333444455555444 8899999 99999999999999999999998765 444431
Q ss_pred hhcccCCCCCCCCccccCCCCCC----CCCCCCCccccCCCchhHHHHHHH-hhhhcccceEEecChhhhhHHHHHHHHc
Q 044031 149 HNQITSSFKDHPSSLLFIPGLPP----VKSSFMPEPVLDRQKPIYDFFLNY-STSLSKSNGIIINTFDFLEQQAIKAIVN 223 (468)
Q Consensus 149 ~~~~~~~~~~~~~~~~~~pg~~~----~~~~~l~~~~~~~~~~~~~~~~~~-~~~~~~~~~~l~~s~~~le~~~~~~~~~ 223 (468)
.. ....+||+|. ++..+++.. ......+..+.+. .+.+.+++++++|||++||+.+++++..
T Consensus 149 -~~----------~~~~~pglp~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~vl~Ntf~eLE~~~~~~~~~ 215 (442)
T PLN02208 149 -GK----------LGVPPPGYPSSKVLFRENDAHAL--ATLSIFYKRLYHQITTGLKSCDVIALRTCKEIEGKFCDYISR 215 (442)
T ss_pred -cc----------cCCCCCCCCCcccccCHHHcCcc--cccchHHHHHHHHHHhhhccCCEEEEECHHHHHHHHHHHHHh
Confidence 00 0112577764 345566642 2222334444432 2456788999999999999999999866
Q ss_pred CcccCCCCCCCeeEecccccCCcCCCCCCCCCCcchhHHhhcCCCCCceEEeccCCCcCCCHHHHHHHHHHHHhCCCcEE
Q 044031 224 GDCVTNGTTPPLHCIGPLIVDAKDRAGGVSDDVSSDCLTWLDSQPSGSVVFLCFGSRGTFSAPQLKEIAIGLERSNQRFL 303 (468)
Q Consensus 224 ~~~~~~~~~p~~~~VGpl~~~~~~~~~~~~~~~~~~l~~~l~~~~~~~~v~vs~GS~~~~~~~~~~~~~~al~~~~~~~l 303 (468)
.. .|+++.|||++....... + ++++|.+|||.+++++||||||||+...+.+++.+++.+|+.++++|+
T Consensus 216 ~~------~~~v~~vGpl~~~~~~~~-~----~~~~~~~wLd~~~~~sVvyvSfGS~~~l~~~q~~e~~~~l~~s~~pf~ 284 (442)
T PLN02208 216 QY------HKKVLLTGPMFPEPDTSK-P----LEEQWSHFLSGFPPKSVVFCSLGSQIILEKDQFQELCLGMELTGLPFL 284 (442)
T ss_pred hc------CCCEEEEeecccCcCCCC-C----CHHHHHHHHhcCCCCcEEEEeccccccCCHHHHHHHHHHHHhCCCcEE
Confidence 43 278999999986432111 1 578899999999888999999999998999999999999999999999
Q ss_pred EEEeCC-CC-ccccCCChhHHhhccCCCeEecCCCCHHhhhCccCcceEEecCCcchHHHHHHhCCcEEecccccchhhH
Q 044031 304 WVVRNP-SN-AAEAELPEGFLERTKERGLVVKSWAPQSTILGHESVGGFVTHCGWSSVVEAVTYGVPMIAWPLYAEQFLN 381 (468)
Q Consensus 304 ~~~~~~-~~-~~~~~~~~~~~~~~~~~~~~v~~~~pq~~il~~~~~~~~ithgG~~s~~eal~~GvP~v~~P~~~DQ~~n 381 (468)
|+++.. .. .....+|++|.++++++|+++.+|+||.+||+|+++++|||||||||++||+++|||||+||+++||+.|
T Consensus 285 wv~r~~~~~~~~~~~lp~~f~~r~~~~g~~v~~W~PQ~~iL~H~~v~~FvtHcG~nS~~Eai~~GVP~l~~P~~~DQ~~n 364 (442)
T PLN02208 285 IAVKPPRGSSTVQEGLPEGFEERVKGRGVVWGGWVQQPLILDHPSIGCFVNHCGPGTIWESLVSDCQMVLIPFLSDQVLF 364 (442)
T ss_pred EEEeCCCcccchhhhCCHHHHHHHhcCCcEeeccCCHHHHhcCCccCeEEccCCchHHHHHHHcCCCEEecCcchhhHHH
Confidence 999864 21 1224689999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHhhcceeeeeccCCcccccCCCCccccHHHHHHHHHHHhcCc--hhHHHHHHHHHHHHHHHHhhcCCCCCChHHHH
Q 044031 382 SVALVQEMKVAMPMFLNGEEETIGNGEGVVSAERVEERVRELMMGS--EGKALRERSLEMRMMAATAWNNNDGGSSFTAF 459 (468)
Q Consensus 382 a~~~~~~~g~g~~~~~~~~~~~~~~~~~~~~~~~l~~av~~~l~~~--~~~~~~~~a~~l~~~~~~a~~~~~~g~~~~~~ 459 (468)
|+++++.||+|+.++. .+++.+++++|+++|+++|+++ +++++|++|+++++.+. ++|||++|+
T Consensus 365 a~~~~~~~g~gv~~~~--------~~~~~~~~~~l~~ai~~~m~~~~e~g~~~r~~~~~~~~~~~------~~gsS~~~l 430 (442)
T PLN02208 365 TRLMTEEFEVSVEVSR--------EKTGWFSKESLSNAIKSVMDKDSDLGKLVRSNHTKLKEILV------SPGLLTGYV 430 (442)
T ss_pred HHHHHHHhceeEEecc--------ccCCcCcHHHHHHHHHHHhcCCchhHHHHHHHHHHHHHHHh------cCCcHHHHH
Confidence 9998877899999974 2235689999999999999875 38899999999999873 468999999
Q ss_pred HHHHHHhh
Q 044031 460 SNLFDLWQ 467 (468)
Q Consensus 460 ~~~~~~~~ 467 (468)
++||++++
T Consensus 431 ~~~v~~l~ 438 (442)
T PLN02208 431 DKFVEELQ 438 (442)
T ss_pred HHHHHHHH
Confidence 99999986
No 15
>PLN02534 UDP-glycosyltransferase
Probab=100.00 E-value=7.2e-69 Score=532.61 Aligned_cols=444 Identities=30% Similarity=0.498 Sum_probs=330.9
Q ss_pred ceEEEecCCCccCHHHHHHHHHHHHhCCCCcEEEEEeCCCCCCchhhhhhhhccccCCCCCeeEEEcCCC----CCCCCC
Q 044031 3 KTIALYPGPAFHHMISMVELGKLILQHRSDVSITILVPSMPLEESKTCSYINSISHRLNPIISFYYLPAI----QMPSET 78 (468)
Q Consensus 3 ~~Iv~~~~~~~GHv~P~l~LA~~L~~~G~~h~Vt~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~i~~~----~lp~~~ 78 (468)
.||+++|+|++||++|+++||+.|+.+| +.|||+++.... ..+......... ....|+|+.+|.+ .+|++.
T Consensus 9 ~Hvv~vPfpaqGHi~P~l~LAk~La~~G--~~vT~v~t~~n~--~~~~~~~~~~~~-~~~~i~~~~lp~p~~~dglp~~~ 83 (491)
T PLN02534 9 LHFVLIPLMAQGHMIPMIDMARLLAERG--VIVSLVTTPQNA--SRFAKTIDRARE-SGLPIRLVQIPFPCKEVGLPIGC 83 (491)
T ss_pred CEEEEECCCCcchHHHHHHHHHHHHhCC--CeEEEEECCCcH--HHHhhhhhhccc-cCCCeEEEEcCCCCccCCCCCCc
Confidence 5999999999999999999999999999 999999876432 223322221110 1124899999842 366654
Q ss_pred CChh-----HH---HHHHHHHhhHHHHHHHHhhhcCCCccEEEe----cCcHHHhhhCCCCeEEEecchhHHHHHHHhhh
Q 044031 79 LSRA-----DI---AIESIKLNSSNVFQALENISLTSKILSFII----TSTTSFSYHPNIPTYTYFNSCASTLAAILYLP 146 (468)
Q Consensus 79 ~~~~-----~~---~~~~~~~~~~~l~~ll~~~~~~~~pD~vI~----~~~~~vA~~lgIP~i~~~~~~~~~~~~~~~~p 146 (468)
+... .. +........+.+.++++.. ..+++|||+ +|+.++|+++|||.+.|++++++.++.++++.
T Consensus 84 ~~~~~~~~~~~~~~~~~~~~~l~~~l~~lL~~~--~~pp~cIV~D~f~~Wa~dVA~~lgIP~v~F~t~~a~~~~~~~~~~ 161 (491)
T PLN02534 84 ENLDTLPSRDLLRKFYDAVDKLQQPLERFLEQA--KPPPSCIISDKCLSWTSKTAQRFNIPRIVFHGMCCFSLLSSHNIR 161 (491)
T ss_pred cccccCCcHHHHHHHHHHHHHhHHHHHHHHHhc--CCCCcEEEECCccHHHHHHHHHhCCCeEEEecchHHHHHHHHHHH
Confidence 3221 11 1122223344555555532 236899999 89999999999999999999999888765442
Q ss_pred hhhhcccCCCCCCCCccccCCCCCC---CCCCCCCccccCCCchhHHHHHHHhhh-hcccceEEecChhhhhHHHHHHHH
Q 044031 147 TLHNQITSSFKDHPSSLLFIPGLPP---VKSSFMPEPVLDRQKPIYDFFLNYSTS-LSKSNGIIINTFDFLEQQAIKAIV 222 (468)
Q Consensus 147 ~~~~~~~~~~~~~~~~~~~~pg~~~---~~~~~l~~~~~~~~~~~~~~~~~~~~~-~~~~~~~l~~s~~~le~~~~~~~~ 222 (468)
..... ..... ...+..+||+|+ ++..+++..+.... .++.+.+.... ..+++++++|||++||+.+++.+.
T Consensus 162 ~~~~~--~~~~~-~~~~~~iPg~p~~~~l~~~dlp~~~~~~~--~~~~~~~~~~~~~~~a~~vlvNTf~eLE~~~l~~l~ 236 (491)
T PLN02534 162 LHNAH--LSVSS-DSEPFVVPGMPQSIEITRAQLPGAFVSLP--DLDDVRNKMREAESTAFGVVVNSFNELEHGCAEAYE 236 (491)
T ss_pred Hhccc--ccCCC-CCceeecCCCCccccccHHHCChhhcCcc--cHHHHHHHHHhhcccCCEEEEecHHHhhHHHHHHHH
Confidence 22111 11111 122455788874 67777876553321 12333333332 345779999999999999999986
Q ss_pred cCcccCCCCCCCeeEecccccCCcCC--C--CCCCC-CCcchhHHhhcCCCCCceEEeccCCCcCCCHHHHHHHHHHHHh
Q 044031 223 NGDCVTNGTTPPLHCIGPLIVDAKDR--A--GGVSD-DVSSDCLTWLDSQPSGSVVFLCFGSRGTFSAPQLKEIAIGLER 297 (468)
Q Consensus 223 ~~~~~~~~~~p~~~~VGpl~~~~~~~--~--~~~~~-~~~~~l~~~l~~~~~~~~v~vs~GS~~~~~~~~~~~~~~al~~ 297 (468)
... .++++.|||++...... . ....+ ...++|.+|||+++++|||||||||+.....+++.+++.+|+.
T Consensus 237 ~~~------~~~v~~VGPL~~~~~~~~~~~~~~~~~~~~~~~cl~wLd~~~~~sVvyvsfGS~~~~~~~q~~e~a~gl~~ 310 (491)
T PLN02534 237 KAI------KKKVWCVGPVSLCNKRNLDKFERGNKASIDETQCLEWLDSMKPRSVIYACLGSLCRLVPSQLIELGLGLEA 310 (491)
T ss_pred hhc------CCcEEEECcccccccccccccccCCccccchHHHHHHHhcCCCCceEEEEecccccCCHHHHHHHHHHHHh
Confidence 543 16899999997532100 0 00001 1235799999999989999999999999999999999999999
Q ss_pred CCCcEEEEEeCCC--Ccc-ccCCChhHHhhccCCCeEecCCCCHHhhhCccCcceEEecCCcchHHHHHHhCCcEEeccc
Q 044031 298 SNQRFLWVVRNPS--NAA-EAELPEGFLERTKERGLVVKSWAPQSTILGHESVGGFVTHCGWSSVVEAVTYGVPMIAWPL 374 (468)
Q Consensus 298 ~~~~~l~~~~~~~--~~~-~~~~~~~~~~~~~~~~~~v~~~~pq~~il~~~~~~~~ithgG~~s~~eal~~GvP~v~~P~ 374 (468)
++++|||+++... ++. ...+|++|.+++.++|+++.+|+||..||+|+++++|||||||||++||+++|||+|+||+
T Consensus 311 ~~~~flW~~r~~~~~~~~~~~~~p~gf~~~~~~~g~~v~~w~pq~~iL~h~~v~~fvtH~G~ns~~ea~~~GvP~v~~P~ 390 (491)
T PLN02534 311 SKKPFIWVIKTGEKHSELEEWLVKENFEERIKGRGLLIKGWAPQVLILSHPAIGGFLTHCGWNSTIEGICSGVPMITWPL 390 (491)
T ss_pred CCCCEEEEEecCccccchhhhcCchhhHHhhccCCeeccCCCCHHHHhcCCccceEEecCccHHHHHHHHcCCCEEeccc
Confidence 9999999998531 111 1236899999988899999999999999999999999999999999999999999999999
Q ss_pred ccchhhHHHHHHhhcceeeeeccCCcccccCCCC--c-cccHHHHHHHHHHHhc--CchhHHHHHHHHHHHHHHHHhhcC
Q 044031 375 YAEQFLNSVALVQEMKVAMPMFLNGEEETIGNGE--G-VVSAERVEERVRELMM--GSEGKALRERSLEMRMMAATAWNN 449 (468)
Q Consensus 375 ~~DQ~~na~~~~~~~g~g~~~~~~~~~~~~~~~~--~-~~~~~~l~~av~~~l~--~~~~~~~~~~a~~l~~~~~~a~~~ 449 (468)
++||+.||+++++.||+|+.+... ....|+.++ + .+++++|+++|+++|. ++++++||+||++|++.+++|+.
T Consensus 391 ~~dq~~na~~~~e~~~vGv~~~~~-~~~~~~~~~~~~~~v~~eev~~~v~~~m~~~~eeg~~~R~rA~elk~~a~~Av~- 468 (491)
T PLN02534 391 FAEQFLNEKLIVEVLRIGVRVGVE-VPVRWGDEERVGVLVKKDEVEKAVKTLMDDGGEEGERRRRRAQELGVMARKAME- 468 (491)
T ss_pred cccHHHHHHHHHHhhcceEEeccc-ccccccccccccCccCHHHHHHHHHHHhccccccHHHHHHHHHHHHHHHHHHhc-
Confidence 999999999999999999988521 001122211 2 5899999999999997 45588999999999999999999
Q ss_pred CCCCChHHHHHHHHHHhh
Q 044031 450 NDGGSSFTAFSNLFDLWQ 467 (468)
Q Consensus 450 ~~~g~~~~~~~~~~~~~~ 467 (468)
+||||++||++||++++
T Consensus 469 -~GGSS~~nl~~fv~~i~ 485 (491)
T PLN02534 469 -LGGSSHINLSILIQDVL 485 (491)
T ss_pred -CCCcHHHHHHHHHHHHH
Confidence 99999999999999986
No 16
>PLN02167 UDP-glycosyltransferase family protein
Probab=100.00 E-value=3.1e-68 Score=532.56 Aligned_cols=447 Identities=32% Similarity=0.588 Sum_probs=333.7
Q ss_pred cceEEEecCCCccCHHHHHHHHHHHHhCCCCcE---EEEEeCCCCCCchhhhhhhhccccCCCCCeeEEEcCCCCCCCCC
Q 044031 2 KKTIALYPGPAFHHMISMVELGKLILQHRSDVS---ITILVPSMPLEESKTCSYINSISHRLNPIISFYYLPAIQMPSET 78 (468)
Q Consensus 2 ~~~Iv~~~~~~~GHv~P~l~LA~~L~~~G~~h~---Vt~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~i~~~~lp~~~ 78 (468)
++||+++|+|++||++||++||++|+.+| .. ||++++..+.+. .....+..... ..++|+|..+|++..|++.
T Consensus 3 ~~hVv~~PfpaqGHi~P~l~LAk~La~~G--~~~t~vt~~~t~~~~~~-~~~~~~~~~~~-~~~~i~~~~lp~~~~p~~~ 78 (475)
T PLN02167 3 EAELIFVPFPSTGHILVTIEFAKRLINLD--RRIHTITILYWSLPFAP-QADAFLKSLIA-SEPRIRLVTLPEVQDPPPM 78 (475)
T ss_pred ccEEEEeCChhhhhHHHHHHHHHHHHhCC--CCeEEEEEEECCCCcch-hhhHHHhhccc-CCCCeEEEECCCCCCCccc
Confidence 47999999999999999999999999998 54 555554433221 11112221111 2246999999976323221
Q ss_pred C----ChhHHHHHHHHHhhHHHHHHHHhhhcC-----C-CccEEEe----cCcHHHhhhCCCCeEEEecchhHHHHHHHh
Q 044031 79 L----SRADIAIESIKLNSSNVFQALENISLT-----S-KILSFII----TSTTSFSYHPNIPTYTYFNSCASTLAAILY 144 (468)
Q Consensus 79 ~----~~~~~~~~~~~~~~~~l~~ll~~~~~~-----~-~pD~vI~----~~~~~vA~~lgIP~i~~~~~~~~~~~~~~~ 144 (468)
+ .....+..+.....+.+++.++++..+ . +++|||+ +|+.++|+++|||.++|++++++.++.+++
T Consensus 79 ~~~~~~~~~~~~~~~~~~~~~l~~~l~~l~~~~~~~~~~pv~cvV~D~f~~Wa~dVA~elgIP~v~F~t~~A~~~~~~~~ 158 (475)
T PLN02167 79 ELFVKASEAYILEFVKKMVPLVRDALSTLVSSRDESDSVRVAGLVLDFFCVPLIDVGNEFNLPSYIFLTCNAGFLGMMKY 158 (475)
T ss_pred cccccchHHHHHHHHHHHHHHHHHHHHHHHhhccccCCCCeEEEEECCccHHHHHHHHHhCCCEEEEECccHHHHHHHHH
Confidence 1 111224444555666777777765421 2 4599999 999999999999999999999999998887
Q ss_pred hhhhhhcccCCCCC-CCCccccCCCCC-CCCCCCCCccccCCCchhHHHHHHHhhhhcccceEEecChhhhhHHHHHHHH
Q 044031 145 LPTLHNQITSSFKD-HPSSLLFIPGLP-PVKSSFMPEPVLDRQKPIYDFFLNYSTSLSKSNGIIINTFDFLEQQAIKAIV 222 (468)
Q Consensus 145 ~p~~~~~~~~~~~~-~~~~~~~~pg~~-~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~s~~~le~~~~~~~~ 222 (468)
++.........+.. ....+..+||++ .++..+++..+.+.. .++.+.+......+++++++|||++||+.+++.++
T Consensus 159 ~~~~~~~~~~~~~~~~~~~~~~iPgl~~~l~~~dlp~~~~~~~--~~~~~~~~~~~~~~a~~vlvNTf~eLE~~~~~~l~ 236 (475)
T PLN02167 159 LPERHRKTASEFDLSSGEEELPIPGFVNSVPTKVLPPGLFMKE--SYEAWVEIAERFPEAKGILVNSFTELEPNAFDYFS 236 (475)
T ss_pred HHHhccccccccccCCCCCeeECCCCCCCCChhhCchhhhCcc--hHHHHHHHHHhhcccCEeeeccHHHHHHHHHHHHH
Confidence 76533211101111 001234589984 688888886554432 23444455666788999999999999999999886
Q ss_pred cCcccCCCCCCCeeEecccccCCcCCCCCCCCCCcchhHHhhcCCCCCceEEeccCCCcCCCHHHHHHHHHHHHhCCCcE
Q 044031 223 NGDCVTNGTTPPLHCIGPLIVDAKDRAGGVSDDVSSDCLTWLDSQPSGSVVFLCFGSRGTFSAPQLKEIAIGLERSNQRF 302 (468)
Q Consensus 223 ~~~~~~~~~~p~~~~VGpl~~~~~~~~~~~~~~~~~~l~~~l~~~~~~~~v~vs~GS~~~~~~~~~~~~~~al~~~~~~~ 302 (468)
... + ..|++++|||++..............+.+|.+||+.++++|||||||||+...+.+++.+++.+|+.++++|
T Consensus 237 ~~~---~-~~p~v~~vGpl~~~~~~~~~~~~~~~~~~~~~wld~~~~~svvyvsfGS~~~~~~~~~~ela~~l~~~~~~f 312 (475)
T PLN02167 237 RLP---E-NYPPVYPVGPILSLKDRTSPNLDSSDRDRIMRWLDDQPESSVVFLCFGSLGSLPAPQIKEIAQALELVGCRF 312 (475)
T ss_pred hhc---c-cCCeeEEeccccccccccCCCCCcchhHHHHHHHhcCCCCceEEEeecccccCCHHHHHHHHHHHHhCCCcE
Confidence 531 0 126899999998643200001000123679999999988899999999998899999999999999999999
Q ss_pred EEEEeCCCC---ccccCCChhHHhhccCCCeEecCCCCHHhhhCccCcceEEecCCcchHHHHHHhCCcEEecccccchh
Q 044031 303 LWVVRNPSN---AAEAELPEGFLERTKERGLVVKSWAPQSTILGHESVGGFVTHCGWSSVVEAVTYGVPMIAWPLYAEQF 379 (468)
Q Consensus 303 l~~~~~~~~---~~~~~~~~~~~~~~~~~~~~v~~~~pq~~il~~~~~~~~ithgG~~s~~eal~~GvP~v~~P~~~DQ~ 379 (468)
||+++...+ .....+|++|.+|++++++++ +|+||.+||+|+++++|||||||||++||+++|||||+||+++||+
T Consensus 313 lw~~~~~~~~~~~~~~~lp~~~~er~~~rg~v~-~w~PQ~~iL~h~~vg~fvtH~G~nS~~Eal~~GvP~l~~P~~~DQ~ 391 (475)
T PLN02167 313 LWSIRTNPAEYASPYEPLPEGFMDRVMGRGLVC-GWAPQVEILAHKAIGGFVSHCGWNSVLESLWFGVPIATWPMYAEQQ 391 (475)
T ss_pred EEEEecCcccccchhhhCChHHHHHhccCeeee-ccCCHHHHhcCcccCeEEeeCCcccHHHHHHcCCCEEeccccccch
Confidence 999986411 112358999999998888666 9999999999999999999999999999999999999999999999
Q ss_pred hHHHHHHhhcceeeeeccCCcccccCCCCccccHHHHHHHHHHHhcCchhHHHHHHHHHHHHHHHHhhcCCCCCChHHHH
Q 044031 380 LNSVALVQEMKVAMPMFLNGEEETIGNGEGVVSAERVEERVRELMMGSEGKALRERSLEMRMMAATAWNNNDGGSSFTAF 459 (468)
Q Consensus 380 ~na~~~~~~~g~g~~~~~~~~~~~~~~~~~~~~~~~l~~av~~~l~~~~~~~~~~~a~~l~~~~~~a~~~~~~g~~~~~~ 459 (468)
.||+++++.||+|+.+... .+..+++.+++++|+++|+++|.+++ +||+||+++++.+++|+. +||||++|+
T Consensus 392 ~na~~~~~~~g~g~~~~~~----~~~~~~~~~~~~~l~~av~~~m~~~~--~~r~~a~~~~~~~~~av~--~gGsS~~~l 463 (475)
T PLN02167 392 LNAFTMVKELGLAVELRLD----YVSAYGEIVKADEIAGAVRSLMDGED--VPRKKVKEIAEAARKAVM--DGGSSFVAV 463 (475)
T ss_pred hhHHHHHHHhCeeEEeecc----cccccCCcccHHHHHHHHHHHhcCCH--HHHHHHHHHHHHHHHHHh--CCCcHHHHH
Confidence 9998866788999999631 00011235799999999999997642 899999999999999999 999999999
Q ss_pred HHHHHHhh
Q 044031 460 SNLFDLWQ 467 (468)
Q Consensus 460 ~~~~~~~~ 467 (468)
++||++|+
T Consensus 464 ~~~v~~i~ 471 (475)
T PLN02167 464 KRFIDDLL 471 (475)
T ss_pred HHHHHHHH
Confidence 99999986
No 17
>PLN00414 glycosyltransferase family protein
Probab=100.00 E-value=4.4e-68 Score=523.95 Aligned_cols=417 Identities=23% Similarity=0.320 Sum_probs=314.7
Q ss_pred cceEEEecCCCccCHHHHHHHHHHHHhCCCCcEEEEEeCCCCCCchhhhhhhhccccCCCCCeeEEEcCCC---CCCCCC
Q 044031 2 KKTIALYPGPAFHHMISMVELGKLILQHRSDVSITILVPSMPLEESKTCSYINSISHRLNPIISFYYLPAI---QMPSET 78 (468)
Q Consensus 2 ~~~Iv~~~~~~~GHv~P~l~LA~~L~~~G~~h~Vt~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~i~~~---~lp~~~ 78 (468)
++||+++|+|++||++||++||++|+++| ++|||+++.... ..+... .. ..++++|..++.+ .+|++.
T Consensus 4 ~~HVvlvPfpaqGHi~PmL~LAk~Las~G--~~VT~vtt~~~~--~~i~~~----~~-~~~~i~~~~i~lP~~dGLP~g~ 74 (446)
T PLN00414 4 KFHAFMYPWFGFGHMIPYLHLANKLAEKG--HRVTFFLPKKAH--KQLQPL----NL-FPDSIVFEPLTLPPVDGLPFGA 74 (446)
T ss_pred CCEEEEecCcccchHHHHHHHHHHHHhCC--CEEEEEeCCchh--hhhccc----cc-CCCceEEEEecCCCcCCCCCcc
Confidence 67999999999999999999999999999 999999865432 112111 11 2235888666522 266554
Q ss_pred CChhHH---HHHHHHHhhHHHHHHHHhhhcCCCccEEEe---cCcHHHhhhCCCCeEEEecchhHHHHHHHhhhhhhhcc
Q 044031 79 LSRADI---AIESIKLNSSNVFQALENISLTSKILSFII---TSTTSFSYHPNIPTYTYFNSCASTLAAILYLPTLHNQI 152 (468)
Q Consensus 79 ~~~~~~---~~~~~~~~~~~l~~ll~~~~~~~~pD~vI~---~~~~~vA~~lgIP~i~~~~~~~~~~~~~~~~p~~~~~~ 152 (468)
+...+. ....+......+...++++.++.+|||||+ +|+.++|+++|||.+.|++++++.++.+++.. ..
T Consensus 75 e~~~~l~~~~~~~~~~a~~~l~~~l~~~L~~~~p~cVV~D~~~wa~~vA~~lgIP~~~F~~~~a~~~~~~~~~~---~~- 150 (446)
T PLN00414 75 ETASDLPNSTKKPIFDAMDLLRDQIEAKVRALKPDLIFFDFVHWVPEMAKEFGIKSVNYQIISAACVAMVLAPR---AE- 150 (446)
T ss_pred cccccchhhHHHHHHHHHHHHHHHHHHHHhcCCCeEEEECCchhHHHHHHHhCCCEEEEecHHHHHHHHHhCcH---hh-
Confidence 332111 122233333344444444443348899999 99999999999999999999999988876521 10
Q ss_pred cCCCCCCCCccccCCCCCC----CCCCCC--CccccCCCchhHHHHHHHhhhhcccceEEecChhhhhHHHHHHHHcCcc
Q 044031 153 TSSFKDHPSSLLFIPGLPP----VKSSFM--PEPVLDRQKPIYDFFLNYSTSLSKSNGIIINTFDFLEQQAIKAIVNGDC 226 (468)
Q Consensus 153 ~~~~~~~~~~~~~~pg~~~----~~~~~l--~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~s~~~le~~~~~~~~~~~~ 226 (468)
. ...+||+|. ++..++ +..+ .. ....+.+......+++++++|||++||+.+++.+....
T Consensus 151 ------~---~~~~pg~p~~~~~~~~~~~~~~~~~-~~---~~~~~~~~~~~~~~~~~vlvNTf~eLE~~~~~~~~~~~- 216 (446)
T PLN00414 151 ------L---GFPPPDYPLSKVALRGHDANVCSLF-AN---SHELFGLITKGLKNCDVVSIRTCVELEGNLCDFIERQC- 216 (446)
T ss_pred ------c---CCCCCCCCCCcCcCchhhcccchhh-cc---cHHHHHHHHHhhccCCEEEEechHHHHHHHHHHHHHhc-
Confidence 0 012355553 222222 2222 11 12334444566778899999999999999999887632
Q ss_pred cCCCCCCCeeEecccccCCcCCCCCCCCCCcchhHHhhcCCCCCceEEeccCCCcCCCHHHHHHHHHHHHhCCCcEEEEE
Q 044031 227 VTNGTTPPLHCIGPLIVDAKDRAGGVSDDVSSDCLTWLDSQPSGSVVFLCFGSRGTFSAPQLKEIAIGLERSNQRFLWVV 306 (468)
Q Consensus 227 ~~~~~~p~~~~VGpl~~~~~~~~~~~~~~~~~~l~~~l~~~~~~~~v~vs~GS~~~~~~~~~~~~~~al~~~~~~~l~~~ 306 (468)
.++++.|||++....... . ...+++|.+|||.++++|||||||||+...+.+++.+++.+|+.++++|+|++
T Consensus 217 -----~~~v~~VGPl~~~~~~~~-~--~~~~~~~~~WLD~q~~~sVvyvsfGS~~~~~~~q~~e~a~gL~~s~~~Flwvv 288 (446)
T PLN00414 217 -----QRKVLLTGPMLPEPQNKS-G--KPLEDRWNHWLNGFEPGSVVFCAFGTQFFFEKDQFQEFCLGMELTGLPFLIAV 288 (446)
T ss_pred -----CCCeEEEcccCCCccccc-C--cccHHHHHHHHhcCCCCceEEEeecccccCCHHHHHHHHHHHHHcCCCeEEEE
Confidence 157999999975332110 0 01345799999999999999999999999999999999999999999999999
Q ss_pred eCC-CC-ccccCCChhHHhhccCCCeEecCCCCHHhhhCccCcceEEecCCcchHHHHHHhCCcEEecccccchhhHHHH
Q 044031 307 RNP-SN-AAEAELPEGFLERTKERGLVVKSWAPQSTILGHESVGGFVTHCGWSSVVEAVTYGVPMIAWPLYAEQFLNSVA 384 (468)
Q Consensus 307 ~~~-~~-~~~~~~~~~~~~~~~~~~~~v~~~~pq~~il~~~~~~~~ithgG~~s~~eal~~GvP~v~~P~~~DQ~~na~~ 384 (468)
+.. .. +....+|++|.++++++|+++.+|+||.+||+|+++++|||||||||++||+++|||+|+||+++||+.||++
T Consensus 289 r~~~~~~~~~~~lp~~f~~r~~~~g~vv~~w~PQ~~vL~h~~v~~fvtH~G~nS~~Ea~~~GvP~l~~P~~~dQ~~na~~ 368 (446)
T PLN00414 289 MPPKGSSTVQEALPEGFEERVKGRGIVWEGWVEQPLILSHPSVGCFVNHCGFGSMWESLVSDCQIVFIPQLADQVLITRL 368 (446)
T ss_pred ecCCCcccchhhCChhHHHHhcCCCeEEeccCCHHHHhcCCccceEEecCchhHHHHHHHcCCCEEecCcccchHHHHHH
Confidence 864 21 1234689999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHhhcceeeeeccCCcccccCCCCccccHHHHHHHHHHHhcCc--hhHHHHHHHHHHHHHHHHhhcCCCCCChHHHHHHH
Q 044031 385 LVQEMKVAMPMFLNGEEETIGNGEGVVSAERVEERVRELMMGS--EGKALRERSLEMRMMAATAWNNNDGGSSFTAFSNL 462 (468)
Q Consensus 385 ~~~~~g~g~~~~~~~~~~~~~~~~~~~~~~~l~~av~~~l~~~--~~~~~~~~a~~l~~~~~~a~~~~~~g~~~~~~~~~ 462 (468)
+++.+|+|+.+.. .+++.+++++|+++|+++|.|+ ++++||++|+++++.+. + +|||| .++++|
T Consensus 369 ~~~~~g~g~~~~~--------~~~~~~~~~~i~~~v~~~m~~~~e~g~~~r~~a~~~~~~~~---~--~gg~s-s~l~~~ 434 (446)
T PLN00414 369 LTEELEVSVKVQR--------EDSGWFSKESLRDTVKSVMDKDSEIGNLVKRNHKKLKETLV---S--PGLLS-GYADKF 434 (446)
T ss_pred HHHHhCeEEEecc--------ccCCccCHHHHHHHHHHHhcCChhhHHHHHHHHHHHHHHHH---c--CCCcH-HHHHHH
Confidence 9878999999963 2234689999999999999864 37889999999999863 3 67744 349999
Q ss_pred HHHhh
Q 044031 463 FDLWQ 467 (468)
Q Consensus 463 ~~~~~ 467 (468)
|++++
T Consensus 435 v~~~~ 439 (446)
T PLN00414 435 VEALE 439 (446)
T ss_pred HHHHH
Confidence 99986
No 18
>PLN02764 glycosyltransferase family protein
Probab=100.00 E-value=8.9e-68 Score=518.11 Aligned_cols=417 Identities=24% Similarity=0.346 Sum_probs=320.7
Q ss_pred cceEEEecCCCccCHHHHHHHHHHHHhCCCCcEEEEEeCCCCCCchhhhhhhhccccCCCCCeeEEEcCCC-CCCCCCCC
Q 044031 2 KKTIALYPGPAFHHMISMVELGKLILQHRSDVSITILVPSMPLEESKTCSYINSISHRLNPIISFYYLPAI-QMPSETLS 80 (468)
Q Consensus 2 ~~~Iv~~~~~~~GHv~P~l~LA~~L~~~G~~h~Vt~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~i~~~-~lp~~~~~ 80 (468)
++||+++|+|++||++|+++||+.|+.+| +.|||+++.... ..+... ... . ..-.+.+..+|.. .+|++.+.
T Consensus 5 ~~Hvvl~P~paqGHi~P~l~LAk~La~~g--~~vT~~tt~~~~--~~~~~~-~~~-~-~~~~v~~~~~p~~~glp~g~e~ 77 (453)
T PLN02764 5 KFHVLMYPWFATGHMTPFLFLANKLAEKG--HTVTFLLPKKAL--KQLEHL-NLF-P-HNIVFRSVTVPHVDGLPVGTET 77 (453)
T ss_pred CcEEEEECCcccccHHHHHHHHHHHHhCC--CEEEEEeCcchh--hhhccc-ccC-C-CCceEEEEECCCcCCCCCcccc
Confidence 57999999999999999999999999999 999999775532 222221 100 0 1113677777732 26655432
Q ss_pred h---h-H---HHHHHHHHhhHHHHHHHHhhhcCCCccEEEe---cCcHHHhhhCCCCeEEEecchhHHHHHHHhhhhhhh
Q 044031 81 R---A-D---IAIESIKLNSSNVFQALENISLTSKILSFII---TSTTSFSYHPNIPTYTYFNSCASTLAAILYLPTLHN 150 (468)
Q Consensus 81 ~---~-~---~~~~~~~~~~~~l~~ll~~~~~~~~pD~vI~---~~~~~vA~~lgIP~i~~~~~~~~~~~~~~~~p~~~~ 150 (468)
. . . .+........+.+.++++.. ++||||+ +|+.++|+++|||.+.|++++++.++.+++ +.
T Consensus 78 ~~~~~~~~~~~~~~a~~~~~~~~~~~l~~~----~~~~iV~D~~~w~~~vA~~~gIP~~~f~~~~a~~~~~~~~-~~--- 149 (453)
T PLN02764 78 VSEIPVTSADLLMSAMDLTRDQVEVVVRAV----EPDLIFFDFAHWIPEVARDFGLKTVKYVVVSASTIASMLV-PG--- 149 (453)
T ss_pred cccCChhHHHHHHHHHHHhHHHHHHHHHhC----CCCEEEECCchhHHHHHHHhCCCEEEEEcHHHHHHHHHhc-cc---
Confidence 2 1 1 12222334455666666654 7899999 999999999999999999999998888752 10
Q ss_pred cccCCCCCCCCccccCCCCCC----CCCCCCCcccc-CCC---chhHHHHHHHhhhhcccceEEecChhhhhHHHHHHHH
Q 044031 151 QITSSFKDHPSSLLFIPGLPP----VKSSFMPEPVL-DRQ---KPIYDFFLNYSTSLSKSNGIIINTFDFLEQQAIKAIV 222 (468)
Q Consensus 151 ~~~~~~~~~~~~~~~~pg~~~----~~~~~l~~~~~-~~~---~~~~~~~~~~~~~~~~~~~~l~~s~~~le~~~~~~~~ 222 (468)
. .. ...+||+|. ++.++++.... .+. ......+.+....+.+++++++|||++||+.++++++
T Consensus 150 -~--~~------~~~~pglp~~~v~l~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~vlvNTf~eLE~~~~~~~~ 220 (453)
T PLN02764 150 -G--EL------GVPPPGYPSSKVLLRKQDAYTMKNLEPTNTIDVGPNLLERVTTSLMNSDVIAIRTAREIEGNFCDYIE 220 (453)
T ss_pred -c--cC------CCCCCCCCCCcccCcHhhCcchhhcCCCccchhHHHHHHHHHHhhccCCEEEEeccHHhhHHHHHHHH
Confidence 0 00 112477763 55566665321 111 1122233333356678889999999999999999997
Q ss_pred cCcccCCCCCCCeeEecccccCCcCCCCCCCCCCcchhHHhhcCCCCCceEEeccCCCcCCCHHHHHHHHHHHHhCCCcE
Q 044031 223 NGDCVTNGTTPPLHCIGPLIVDAKDRAGGVSDDVSSDCLTWLDSQPSGSVVFLCFGSRGTFSAPQLKEIAIGLERSNQRF 302 (468)
Q Consensus 223 ~~~~~~~~~~p~~~~VGpl~~~~~~~~~~~~~~~~~~l~~~l~~~~~~~~v~vs~GS~~~~~~~~~~~~~~al~~~~~~~ 302 (468)
... + ++++.|||++....... . .+.+|.+|||+++++|||||||||+...+.+++.+++.+|+.++++|
T Consensus 221 ~~~---~---~~v~~VGPL~~~~~~~~-~----~~~~cl~WLD~q~~~sVvyvsfGS~~~~~~~q~~ela~gL~~s~~pf 289 (453)
T PLN02764 221 KHC---R---KKVLLTGPVFPEPDKTR-E----LEERWVKWLSGYEPDSVVFCALGSQVILEKDQFQELCLGMELTGSPF 289 (453)
T ss_pred hhc---C---CcEEEeccCccCccccc-c----chhHHHHHHhCCCCCceEEEeecccccCCHHHHHHHHHHHHhCCCCe
Confidence 632 1 57999999975331011 1 35689999999999999999999999999999999999999999999
Q ss_pred EEEEeCCC--CccccCCChhHHhhccCCCeEecCCCCHHhhhCccCcceEEecCCcchHHHHHHhCCcEEecccccchhh
Q 044031 303 LWVVRNPS--NAAEAELPEGFLERTKERGLVVKSWAPQSTILGHESVGGFVTHCGWSSVVEAVTYGVPMIAWPLYAEQFL 380 (468)
Q Consensus 303 l~~~~~~~--~~~~~~~~~~~~~~~~~~~~~v~~~~pq~~il~~~~~~~~ithgG~~s~~eal~~GvP~v~~P~~~DQ~~ 380 (468)
+|+++... +.....+|++|.++++++|+++.+|+||.+||+|+++++|||||||||++||+++|||||+||+++||+.
T Consensus 290 lwv~r~~~~~~~~~~~lp~~f~~r~~grG~v~~~W~PQ~~vL~h~~v~~FvtH~G~nS~~Eal~~GVP~l~~P~~~DQ~~ 369 (453)
T PLN02764 290 LVAVKPPRGSSTIQEALPEGFEERVKGRGVVWGGWVQQPLILSHPSVGCFVSHCGFGSMWESLLSDCQIVLVPQLGDQVL 369 (453)
T ss_pred EEEEeCCCCCcchhhhCCcchHhhhccCCcEEeCCCCHHHHhcCcccCeEEecCCchHHHHHHHcCCCEEeCCcccchHH
Confidence 99999641 1123469999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHhhcceeeeeccCCcccccCCCCccccHHHHHHHHHHHhcCc--hhHHHHHHHHHHHHHHHHhhcCCCCCChHHH
Q 044031 381 NSVALVQEMKVAMPMFLNGEEETIGNGEGVVSAERVEERVRELMMGS--EGKALRERSLEMRMMAATAWNNNDGGSSFTA 458 (468)
Q Consensus 381 na~~~~~~~g~g~~~~~~~~~~~~~~~~~~~~~~~l~~av~~~l~~~--~~~~~~~~a~~l~~~~~~a~~~~~~g~~~~~ 458 (468)
||+++++.+|+|+.+.. ++.+.+++++|+++|+++|+++ +++++|++|+++++.++ ++|||+++
T Consensus 370 na~~l~~~~g~gv~~~~--------~~~~~~~~e~i~~av~~vm~~~~~~g~~~r~~a~~~~~~~~------~~GSS~~~ 435 (453)
T PLN02764 370 NTRLLSDELKVSVEVAR--------EETGWFSKESLRDAINSVMKRDSEIGNLVKKNHTKWRETLA------SPGLLTGY 435 (453)
T ss_pred HHHHHHHHhceEEEecc--------ccCCccCHHHHHHHHHHHhcCCchhHHHHHHHHHHHHHHHH------hcCCHHHH
Confidence 99999877899998853 1123489999999999999874 47889999999999873 67999999
Q ss_pred HHHHHHHhh
Q 044031 459 FSNLFDLWQ 467 (468)
Q Consensus 459 ~~~~~~~~~ 467 (468)
+++||++++
T Consensus 436 l~~lv~~~~ 444 (453)
T PLN02764 436 VDNFIESLQ 444 (453)
T ss_pred HHHHHHHHH
Confidence 999999986
No 19
>PLN03007 UDP-glucosyltransferase family protein
Probab=100.00 E-value=6.6e-67 Score=524.51 Aligned_cols=445 Identities=31% Similarity=0.501 Sum_probs=325.8
Q ss_pred cceEEEecCCCccCHHHHHHHHHHHHhCCCCcEEEEEeCCCCCCchhhhhhhhccccCCCC----CeeEEEcCCC--CCC
Q 044031 2 KKTIALYPGPAFHHMISMVELGKLILQHRSDVSITILVPSMPLEESKTCSYINSISHRLNP----IISFYYLPAI--QMP 75 (468)
Q Consensus 2 ~~~Iv~~~~~~~GHv~P~l~LA~~L~~~G~~h~Vt~~~~~~~~~~~~~~~~~~~~~~~~~~----~i~~~~i~~~--~lp 75 (468)
++||+++|+|++||++|++.||++|++|| ++|||+++.... ..+.+....... ..+ .+.+..+|.. .+|
T Consensus 5 ~~hVvlvp~pa~GHi~P~L~LAk~L~~rG--~~VT~vtt~~~~--~~i~~~~a~~~~-~~~~~~~~~~~~~~p~~~~glP 79 (482)
T PLN03007 5 KLHILFFPFMAHGHMIPTLDMAKLFSSRG--AKSTILTTPLNA--KIFEKPIEAFKN-LNPGLEIDIQIFNFPCVELGLP 79 (482)
T ss_pred CcEEEEECCCccccHHHHHHHHHHHHhCC--CEEEEEECCCch--hhhhhhhhhhcc-cCCCCcceEEEeeCCCCcCCCC
Confidence 46999999999999999999999999999 999999877543 222322221100 011 3444555421 256
Q ss_pred CCCCChh---------H-HHHHHHHHhhHHHHHHHHhhhcCCCccEEEe----cCcHHHhhhCCCCeEEEecchhHHHHH
Q 044031 76 SETLSRA---------D-IAIESIKLNSSNVFQALENISLTSKILSFII----TSTTSFSYHPNIPTYTYFNSCASTLAA 141 (468)
Q Consensus 76 ~~~~~~~---------~-~~~~~~~~~~~~l~~ll~~~~~~~~pD~vI~----~~~~~vA~~lgIP~i~~~~~~~~~~~~ 141 (468)
++.+... . .+...+......+.+.++++.++.++||||+ +|+.++|+++|||.+.|++++++.++.
T Consensus 80 ~g~e~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~l~~~~~~~IV~D~~~~w~~~vA~~lgIP~v~f~~~~a~~~~~ 159 (482)
T PLN03007 80 EGCENVDFITSNNNDDSGDLFLKFLFSTKYFKDQLEKLLETTRPDCLVADMFFPWATEAAEKFGVPRLVFHGTGYFSLCA 159 (482)
T ss_pred CCcccccccccccccchHHHHHHHHHHHHHHHHHHHHHHhcCCCCEEEECCcchhHHHHHHHhCCCeEEeecccHHHHHH
Confidence 5433221 0 1122222334445555555544448999999 999999999999999999999998877
Q ss_pred HHhhhhhhhcccCCCCCCCCccccCCCCCC---CCCCCCCccccCCCchhHHHHHHHhhhhcccceEEecChhhhhHHHH
Q 044031 142 ILYLPTLHNQITSSFKDHPSSLLFIPGLPP---VKSSFMPEPVLDRQKPIYDFFLNYSTSLSKSNGIIINTFDFLEQQAI 218 (468)
Q Consensus 142 ~~~~p~~~~~~~~~~~~~~~~~~~~pg~~~---~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~s~~~le~~~~ 218 (468)
++++....... ..... .....+||+|. ++..+++.. +........+........+++++++||+++||..+.
T Consensus 160 ~~~~~~~~~~~--~~~~~-~~~~~~pg~p~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~vl~Nt~~~le~~~~ 234 (482)
T PLN03007 160 SYCIRVHKPQK--KVASS-SEPFVIPDLPGDIVITEEQINDA--DEESPMGKFMKEVRESEVKSFGVLVNSFYELESAYA 234 (482)
T ss_pred HHHHHhccccc--ccCCC-CceeeCCCCCCccccCHHhcCCC--CCchhHHHHHHHHHhhcccCCEEEEECHHHHHHHHH
Confidence 65543211100 00010 11234777763 333444431 222223333334445677888999999999999988
Q ss_pred HHHHcCcccCCCCCCCeeEecccccCCcCC---C-CCCC-CCCcchhHHhhcCCCCCceEEeccCCCcCCCHHHHHHHHH
Q 044031 219 KAIVNGDCVTNGTTPPLHCIGPLIVDAKDR---A-GGVS-DDVSSDCLTWLDSQPSGSVVFLCFGSRGTFSAPQLKEIAI 293 (468)
Q Consensus 219 ~~~~~~~~~~~~~~p~~~~VGpl~~~~~~~---~-~~~~-~~~~~~l~~~l~~~~~~~~v~vs~GS~~~~~~~~~~~~~~ 293 (468)
+.+.+.. .+++++|||+....... . .... +..+.+|.+||++++++|+|||||||+...+.+++.+++.
T Consensus 235 ~~~~~~~------~~~~~~VGPl~~~~~~~~~~~~~~~~~~~~~~~~~~wLd~~~~~svvyvsfGS~~~~~~~~~~~~~~ 308 (482)
T PLN03007 235 DFYKSFV------AKRAWHIGPLSLYNRGFEEKAERGKKANIDEQECLKWLDSKKPDSVIYLSFGSVASFKNEQLFEIAA 308 (482)
T ss_pred HHHHhcc------CCCEEEEccccccccccccccccCCccccchhHHHHHHhcCCCCceEEEeecCCcCCCHHHHHHHHH
Confidence 8886543 14799999986432100 0 0000 1135779999999988999999999999888999999999
Q ss_pred HHHhCCCcEEEEEeCCCC--ccccCCChhHHhhccCCCeEecCCCCHHhhhCccCcceEEecCCcchHHHHHHhCCcEEe
Q 044031 294 GLERSNQRFLWVVRNPSN--AAEAELPEGFLERTKERGLVVKSWAPQSTILGHESVGGFVTHCGWSSVVEAVTYGVPMIA 371 (468)
Q Consensus 294 al~~~~~~~l~~~~~~~~--~~~~~~~~~~~~~~~~~~~~v~~~~pq~~il~~~~~~~~ithgG~~s~~eal~~GvP~v~ 371 (468)
+|+.++++|||+++...+ +....+|++|.+++.++|+++.+|+||.+||+|+++++|||||||||++||+++|||||+
T Consensus 309 ~l~~~~~~flw~~~~~~~~~~~~~~lp~~~~~r~~~~g~~v~~w~PQ~~iL~h~~v~~fvtH~G~nS~~Eal~~GVP~v~ 388 (482)
T PLN03007 309 GLEGSGQNFIWVVRKNENQGEKEEWLPEGFEERTKGKGLIIRGWAPQVLILDHQATGGFVTHCGWNSLLEGVAAGLPMVT 388 (482)
T ss_pred HHHHCCCCEEEEEecCCcccchhhcCCHHHHHHhccCCEEEecCCCHHHHhccCccceeeecCcchHHHHHHHcCCCeee
Confidence 999999999999996411 112358999999999999999999999999999999999999999999999999999999
Q ss_pred cccccchhhHHHHHHhhcceeeeeccCCcccccCCCCccccHHHHHHHHHHHhcCchhHHHHHHHHHHHHHHHHhhcCCC
Q 044031 372 WPLYAEQFLNSVALVQEMKVAMPMFLNGEEETIGNGEGVVSAERVEERVRELMMGSEGKALRERSLEMRMMAATAWNNND 451 (468)
Q Consensus 372 ~P~~~DQ~~na~~~~~~~g~g~~~~~~~~~~~~~~~~~~~~~~~l~~av~~~l~~~~~~~~~~~a~~l~~~~~~a~~~~~ 451 (468)
||+++||+.||+++++.+++|+.+...+ ..+ .+.+.+++++|+++|+++|.|+++++||+||+++++.+++|+. +
T Consensus 389 ~P~~~DQ~~na~~~~~~~~~G~~~~~~~--~~~-~~~~~~~~~~l~~av~~~m~~~~~~~~r~~a~~~~~~a~~a~~--~ 463 (482)
T PLN03007 389 WPVGAEQFYNEKLVTQVLRTGVSVGAKK--LVK-VKGDFISREKVEKAVREVIVGEEAEERRLRAKKLAEMAKAAVE--E 463 (482)
T ss_pred ccchhhhhhhHHHHHHhhcceeEecccc--ccc-cccCcccHHHHHHHHHHHhcCcHHHHHHHHHHHHHHHHHHHHh--C
Confidence 9999999999999988778887764200 000 0123489999999999999988889999999999999999999 9
Q ss_pred CCChHHHHHHHHHHhh
Q 044031 452 GGSSFTAFSNLFDLWQ 467 (468)
Q Consensus 452 ~g~~~~~~~~~~~~~~ 467 (468)
||||++|+++||++++
T Consensus 464 gGsS~~~l~~~v~~~~ 479 (482)
T PLN03007 464 GGSSFNDLNKFMEELN 479 (482)
T ss_pred CCcHHHHHHHHHHHHH
Confidence 9999999999999986
No 20
>PLN02670 transferase, transferring glycosyl groups
Probab=100.00 E-value=5.1e-67 Score=516.98 Aligned_cols=432 Identities=26% Similarity=0.385 Sum_probs=323.1
Q ss_pred cceEEEecCCCccCHHHHHHHHHHHHhCCCCcEEEEEeCCCCCCchhhhhhhhccccCCCCCeeEEEcCCCC---CCCCC
Q 044031 2 KKTIALYPGPAFHHMISMVELGKLILQHRSDVSITILVPSMPLEESKTCSYINSISHRLNPIISFYYLPAIQ---MPSET 78 (468)
Q Consensus 2 ~~~Iv~~~~~~~GHv~P~l~LA~~L~~~G~~h~Vt~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~i~~~~---lp~~~ 78 (468)
++|||++|+|++||++||++||++|+.+| +.|||+++.... ......... ..++|+++.+|.+. +|++.
T Consensus 6 ~~HVvl~P~paqGHi~P~l~LAk~La~~G--~~vT~v~t~~n~--~~~~~~~~~----~~~~i~~~~lp~p~~dglp~~~ 77 (472)
T PLN02670 6 VLHVAMFPWLAMGHLIPFLRLSKLLAQKG--HKISFISTPRNL--HRLPKIPSQ----LSSSITLVSFPLPSVPGLPSSA 77 (472)
T ss_pred CcEEEEeCChhhhHHHHHHHHHHHHHhCC--CEEEEEeCCchH--Hhhhhcccc----CCCCeeEEECCCCccCCCCCCc
Confidence 36999999999999999999999999999 999999776432 222211111 22368999998432 56543
Q ss_pred CChhHH-------HHHHHHHhhHHHHHHHHhhhcCCCccEEEe----cCcHHHhhhCCCCeEEEecchhHHHHHHHhhhh
Q 044031 79 LSRADI-------AIESIKLNSSNVFQALENISLTSKILSFII----TSTTSFSYHPNIPTYTYFNSCASTLAAILYLPT 147 (468)
Q Consensus 79 ~~~~~~-------~~~~~~~~~~~l~~ll~~~~~~~~pD~vI~----~~~~~vA~~lgIP~i~~~~~~~~~~~~~~~~p~ 147 (468)
+...+. +........+.+++++++. +++|||+ .|+.++|+++|||.+.|++++++.++.+++++.
T Consensus 78 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~----~~~cvI~D~f~~wa~~vA~~~gIP~~~f~~~~a~~~~~~~~~~~ 153 (472)
T PLN02670 78 ESSTDVPYTKQQLLKKAFDLLEPPLTTFLETS----KPDWIIYDYASHWLPSIAAELGISKAFFSLFTAATLSFIGPPSS 153 (472)
T ss_pred ccccccchhhHHHHHHHHHHhHHHHHHHHHhC----CCcEEEECCcchhHHHHHHHcCCCEEEEehhhHHHHHHHhhhHh
Confidence 322111 2222333344555555443 8899999 999999999999999999999999988765543
Q ss_pred hhhcccCCCCCCCCccccCCCCCC------CCCCCCCccccCC--CchhHHHHHHHhhhhcccceEEecChhhhhHHHHH
Q 044031 148 LHNQITSSFKDHPSSLLFIPGLPP------VKSSFMPEPVLDR--QKPIYDFFLNYSTSLSKSNGIIINTFDFLEQQAIK 219 (468)
Q Consensus 148 ~~~~~~~~~~~~~~~~~~~pg~~~------~~~~~l~~~~~~~--~~~~~~~~~~~~~~~~~~~~~l~~s~~~le~~~~~ 219 (468)
+..... ..........+|++.+ ++..+++.++... ....+..+.+......+++++++|||++||+.+++
T Consensus 154 ~~~~~~--~~~~~~~~~~~p~~~P~~~~~~~~~~dlp~~~~~~~~~~~~~~~~~~~~~~~~~~~gvlvNTf~eLE~~~l~ 231 (472)
T PLN02670 154 LMEGGD--LRSTAEDFTVVPPWVPFESNIVFRYHEVTKYVEKTEEDETGPSDSVRFGFAIGGSDVVIIRSSPEFEPEWFD 231 (472)
T ss_pred hhhccc--CCCccccccCCCCcCCCCccccccHHHhhHHHhccCccchHHHHHHHHHhhcccCCEEEEeCHHHHhHHHHH
Confidence 322211 1111111112444322 3445777655321 22233444455556678899999999999999999
Q ss_pred HHHcCcccCCCCCCCeeEecccccCC-c-CCCCCCCCCCcchhHHhhcCCCCCceEEeccCCCcCCCHHHHHHHHHHHHh
Q 044031 220 AIVNGDCVTNGTTPPLHCIGPLIVDA-K-DRAGGVSDDVSSDCLTWLDSQPSGSVVFLCFGSRGTFSAPQLKEIAIGLER 297 (468)
Q Consensus 220 ~~~~~~~~~~~~~p~~~~VGpl~~~~-~-~~~~~~~~~~~~~l~~~l~~~~~~~~v~vs~GS~~~~~~~~~~~~~~al~~ 297 (468)
.++... .++++.|||++... . ............+|.+|||++++++||||||||+...+.+++.+++.+|+.
T Consensus 232 ~l~~~~------~~~v~~VGPl~~~~~~~~~~~~~~~~~~~~~~~wLd~~~~~sVvyvsfGS~~~l~~~q~~ela~gl~~ 305 (472)
T PLN02670 232 LLSDLY------RKPIIPIGFLPPVIEDDEEDDTIDVKGWVRIKEWLDKQRVNSVVYVALGTEASLRREEVTELALGLEK 305 (472)
T ss_pred HHHHhh------CCCeEEEecCCccccccccccccccchhHHHHHHHhcCCCCceEEEEecccccCCHHHHHHHHHHHHH
Confidence 997642 15799999997531 1 011000000125799999999888999999999999999999999999999
Q ss_pred CCCcEEEEEeCC-CC--ccccCCChhHHhhccCCCeEecCCCCHHhhhCccCcceEEecCCcchHHHHHHhCCcEEeccc
Q 044031 298 SNQRFLWVVRNP-SN--AAEAELPEGFLERTKERGLVVKSWAPQSTILGHESVGGFVTHCGWSSVVEAVTYGVPMIAWPL 374 (468)
Q Consensus 298 ~~~~~l~~~~~~-~~--~~~~~~~~~~~~~~~~~~~~v~~~~pq~~il~~~~~~~~ithgG~~s~~eal~~GvP~v~~P~ 374 (468)
++++|||+++.. .. .....+|++|.++++.+|+++.+|+||.+||+|+++++|||||||||++||+++|||||+||+
T Consensus 306 s~~~FlWv~r~~~~~~~~~~~~lp~~f~~~~~~rG~vv~~W~PQ~~IL~H~~v~~FvtHcGwnS~~Eai~~GVP~l~~P~ 385 (472)
T PLN02670 306 SETPFFWVLRNEPGTTQNALEMLPDGFEERVKGRGMIHVGWVPQVKILSHESVGGFLTHCGWNSVVEGLGFGRVLILFPV 385 (472)
T ss_pred CCCCEEEEEcCCcccccchhhcCChHHHHhccCCCeEEeCcCCHHHHhcCcccceeeecCCcchHHHHHHcCCCEEeCcc
Confidence 999999999864 11 112368999999999999999999999999999999999999999999999999999999999
Q ss_pred ccchhhHHHHHHhhcceeeeeccCCcccccCCCCccccHHHHHHHHHHHhcCchhHHHHHHHHHHHHHHHHhhcCCCCCC
Q 044031 375 YAEQFLNSVALVQEMKVAMPMFLNGEEETIGNGEGVVSAERVEERVRELMMGSEGKALRERSLEMRMMAATAWNNNDGGS 454 (468)
Q Consensus 375 ~~DQ~~na~~~~~~~g~g~~~~~~~~~~~~~~~~~~~~~~~l~~av~~~l~~~~~~~~~~~a~~l~~~~~~a~~~~~~g~ 454 (468)
++||+.||++++ .+|+|+.+.. .++++.+++++|+++|+++|.|+++++||+||+++++.+++ .+.
T Consensus 386 ~~DQ~~Na~~v~-~~g~Gv~l~~-------~~~~~~~~~e~i~~av~~vm~~~~g~~~r~~a~~l~~~~~~------~~~ 451 (472)
T PLN02670 386 LNEQGLNTRLLH-GKKLGLEVPR-------DERDGSFTSDSVAESVRLAMVDDAGEEIRDKAKEMRNLFGD------MDR 451 (472)
T ss_pred hhccHHHHHHHH-HcCeeEEeec-------cccCCcCcHHHHHHHHHHHhcCcchHHHHHHHHHHHHHHhC------cch
Confidence 999999999996 5799999974 12235689999999999999887788999999999998875 466
Q ss_pred hHHHHHHHHHHhh
Q 044031 455 SFTAFSNLFDLWQ 467 (468)
Q Consensus 455 ~~~~~~~~~~~~~ 467 (468)
-...+++|++.++
T Consensus 452 ~~~~~~~~~~~l~ 464 (472)
T PLN02670 452 NNRYVDELVHYLR 464 (472)
T ss_pred hHHHHHHHHHHHH
Confidence 7788999998876
No 21
>PLN02448 UDP-glycosyltransferase family protein
Probab=100.00 E-value=9e-67 Score=521.02 Aligned_cols=431 Identities=29% Similarity=0.399 Sum_probs=330.8
Q ss_pred cceEEEecCCCccCHHHHHHHHHHHHhC--CCCcEEEEEeCCCCCCchhhhhhhhccccCCCCCeeEEEcCCCCCCCCCC
Q 044031 2 KKTIALYPGPAFHHMISMVELGKLILQH--RSDVSITILVPSMPLEESKTCSYINSISHRLNPIISFYYLPAIQMPSETL 79 (468)
Q Consensus 2 ~~~Iv~~~~~~~GHv~P~l~LA~~L~~~--G~~h~Vt~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~i~~~~lp~~~~ 79 (468)
+.||+++|+|++||++|+++||++|+.+ | |.|||+++..... .+.... ..++++|+.+++. +|++..
T Consensus 10 ~~hVvlvp~pa~GHi~P~l~LA~~L~~~~~G--~~VT~~~t~~~~~--~i~~~~------~~~gi~fv~lp~~-~p~~~~ 78 (459)
T PLN02448 10 SCHVVAMPYPGRGHINPMMNLCKLLASRKPD--ILITFVVTEEWLG--LIGSDP------KPDNIRFATIPNV-IPSELV 78 (459)
T ss_pred CcEEEEECCcccccHHHHHHHHHHHHcCCCC--cEEEEEeCCchHh--HhhccC------CCCCEEEEECCCC-CCCccc
Confidence 3699999999999999999999999999 9 9999998765432 111110 1237999999875 554432
Q ss_pred C---hhHHHHHHHHHhhHHHHHHHHhhhcCCCccEEEe----cCcHHHhhhCCCCeEEEecchhHHHHHHHhhhhhhhcc
Q 044031 80 S---RADIAIESIKLNSSNVFQALENISLTSKILSFII----TSTTSFSYHPNIPTYTYFNSCASTLAAILYLPTLHNQI 152 (468)
Q Consensus 80 ~---~~~~~~~~~~~~~~~l~~ll~~~~~~~~pD~vI~----~~~~~vA~~lgIP~i~~~~~~~~~~~~~~~~p~~~~~~ 152 (468)
. ...++..+.....+.++++++.+. .++||||+ .|+..+|+++|||++.|++++++.++.+++++.+....
T Consensus 79 ~~~~~~~~~~~~~~~~~~~~~~~l~~~~--~~~~~VI~D~~~~wa~~vA~~lgIP~v~f~~~~a~~~~~~~~~~~~~~~~ 156 (459)
T PLN02448 79 RAADFPGFLEAVMTKMEAPFEQLLDRLE--PPVTAIVADTYLFWAVGVGNRRNIPVASLWTMSATFFSVFYHFDLLPQNG 156 (459)
T ss_pred cccCHHHHHHHHHHHhHHHHHHHHHhcC--CCcEEEEECCccHHHHHHHHHhCCCeEEEEhHHHHHHHHHHHhhhhhhcc
Confidence 1 111133333345566777776653 37899999 99999999999999999999999888887776543221
Q ss_pred cCCCCC---CCCccccCCCCCCCCCCCCCccccCCCchhHHHHHHHhhhhcccceEEecChhhhhHHHHHHHHcCcccCC
Q 044031 153 TSSFKD---HPSSLLFIPGLPPVKSSFMPEPVLDRQKPIYDFFLNYSTSLSKSNGIIINTFDFLEQQAIKAIVNGDCVTN 229 (468)
Q Consensus 153 ~~~~~~---~~~~~~~~pg~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~s~~~le~~~~~~~~~~~~~~~ 229 (468)
..+... .......+||+++++..+++..+.......++.+.+......+++++++|||++||+.+++.+...+
T Consensus 157 ~~~~~~~~~~~~~~~~iPg~~~l~~~dlp~~~~~~~~~~~~~~~~~~~~~~~~~~vlvNTf~eLE~~~~~~l~~~~---- 232 (459)
T PLN02448 157 HFPVELSESGEERVDYIPGLSSTRLSDLPPIFHGNSRRVLKRILEAFSWVPKAQYLLFTSFYELEAQAIDALKSKF---- 232 (459)
T ss_pred CCCCccccccCCccccCCCCCCCChHHCchhhcCCchHHHHHHHHHHhhcccCCEEEEccHHHhhHHHHHHHHhhc----
Confidence 111111 0111124788888888888876654433445566666666777889999999999999999987643
Q ss_pred CCCCCeeEecccccCCcCCCCCCC-C--CCcchhHHhhcCCCCCceEEeccCCCcCCCHHHHHHHHHHHHhCCCcEEEEE
Q 044031 230 GTTPPLHCIGPLIVDAKDRAGGVS-D--DVSSDCLTWLDSQPSGSVVFLCFGSRGTFSAPQLKEIAIGLERSNQRFLWVV 306 (468)
Q Consensus 230 ~~~p~~~~VGpl~~~~~~~~~~~~-~--~~~~~l~~~l~~~~~~~~v~vs~GS~~~~~~~~~~~~~~al~~~~~~~l~~~ 306 (468)
.++++.|||+............ + ..+.+|.+||+.++++++|||||||+...+.+++.+++++|+.++++|||++
T Consensus 233 --~~~~~~iGP~~~~~~~~~~~~~~~~~~~~~~~~~wl~~~~~~~vvyvsfGs~~~~~~~~~~~~~~~l~~~~~~~lw~~ 310 (459)
T PLN02448 233 --PFPVYPIGPSIPYMELKDNSSSSNNEDNEPDYFQWLDSQPEGSVLYVSLGSFLSVSSAQMDEIAAGLRDSGVRFLWVA 310 (459)
T ss_pred --CCceEEecCcccccccCCCccccccccchhHHHHHHcCCCCCceEEEeecccccCCHHHHHHHHHHHHhCCCCEEEEE
Confidence 1479999999753210000000 0 0224799999999888999999999988889999999999999999999987
Q ss_pred eCCCCccccCCChhHHhhccCCCeEecCCCCHHhhhCccCcceEEecCCcchHHHHHHhCCcEEecccccchhhHHHHHH
Q 044031 307 RNPSNAAEAELPEGFLERTKERGLVVKSWAPQSTILGHESVGGFVTHCGWSSVVEAVTYGVPMIAWPLYAEQFLNSVALV 386 (468)
Q Consensus 307 ~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~pq~~il~~~~~~~~ithgG~~s~~eal~~GvP~v~~P~~~DQ~~na~~~~ 386 (468)
+.. ..++.++.. .+.++.+|+||.+||+|+++++|||||||||++||+++|||||+||+++||+.||++++
T Consensus 311 ~~~--------~~~~~~~~~-~~~~v~~w~pQ~~iL~h~~v~~fvtHgG~nS~~eal~~GvP~l~~P~~~DQ~~na~~v~ 381 (459)
T PLN02448 311 RGE--------ASRLKEICG-DMGLVVPWCDQLKVLCHSSVGGFWTHCGWNSTLEAVFAGVPMLTFPLFWDQPLNSKLIV 381 (459)
T ss_pred cCc--------hhhHhHhcc-CCEEEeccCCHHHHhccCccceEEecCchhHHHHHHHcCCCEEeccccccchhhHHHHH
Confidence 643 123444433 34556699999999999999999999999999999999999999999999999999999
Q ss_pred hhcceeeeeccCCcccccCCCCccccHHHHHHHHHHHhcCc--hhHHHHHHHHHHHHHHHHhhcCCCCCChHHHHHHHHH
Q 044031 387 QEMKVAMPMFLNGEEETIGNGEGVVSAERVEERVRELMMGS--EGKALRERSLEMRMMAATAWNNNDGGSSFTAFSNLFD 464 (468)
Q Consensus 387 ~~~g~g~~~~~~~~~~~~~~~~~~~~~~~l~~av~~~l~~~--~~~~~~~~a~~l~~~~~~a~~~~~~g~~~~~~~~~~~ 464 (468)
+.||+|+.+... ..+.+.+++++|+++|+++|.++ ++++||+||+++++.+++|+. +||||++||++||+
T Consensus 382 ~~~g~G~~~~~~------~~~~~~~~~~~l~~av~~vl~~~~~~~~~~r~~a~~~~~~~~~a~~--~gGss~~~l~~~v~ 453 (459)
T PLN02448 382 EDWKIGWRVKRE------VGEETLVGREEIAELVKRFMDLESEEGKEMRRRAKELQEICRGAIA--KGGSSDTNLDAFIR 453 (459)
T ss_pred HHhCceEEEecc------cccCCcCcHHHHHHHHHHHhcCCchhHHHHHHHHHHHHHHHHHHhc--CCCcHHHHHHHHHH
Confidence 889999998631 11124589999999999999864 488999999999999999999 99999999999999
Q ss_pred HhhC
Q 044031 465 LWQI 468 (468)
Q Consensus 465 ~~~~ 468 (468)
+++.
T Consensus 454 ~~~~ 457 (459)
T PLN02448 454 DISQ 457 (459)
T ss_pred HHhc
Confidence 9873
No 22
>PHA03392 egt ecdysteroid UDP-glucosyltransferase; Provisional
Probab=100.00 E-value=1.7e-42 Score=348.56 Aligned_cols=371 Identities=18% Similarity=0.257 Sum_probs=240.8
Q ss_pred eEEEe-cCCCccCHHHHHHHHHHHHhCCCCcEEEEEeCCCCCCchhhhhhhhccccCCCCCeeEEEcCCCC--CCC---C
Q 044031 4 TIALY-PGPAFHHMISMVELGKLILQHRSDVSITILVPSMPLEESKTCSYINSISHRLNPIISFYYLPAIQ--MPS---E 77 (468)
Q Consensus 4 ~Iv~~-~~~~~GHv~P~l~LA~~L~~~G~~h~Vt~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~i~~~~--lp~---~ 77 (468)
+|+.+ |.++.+|..-+-.|+++|++|| |+||++++....... .. ...+++.+.++... +.. .
T Consensus 22 kIl~~~P~~~~SH~~~~~~l~~~La~rG--H~VTvi~p~~~~~~~---~~-------~~~~~~~i~~~~~~~~~~~~~~~ 89 (507)
T PHA03392 22 RILAVFPTPAYSHHSVFKVYVEALAERG--HNVTVIKPTLRVYYA---SH-------LCGNITEIDASLSVEYFKKLVKS 89 (507)
T ss_pred cEEEEcCCCCCcHHHHHHHHHHHHHHcC--CeEEEEecccccccc---cC-------CCCCEEEEEcCCChHHHHHHHhh
Confidence 46644 8899999999999999999999 999999664311100 00 12355555554221 000 0
Q ss_pred C---------CChhHH----H---HHHHH--HhhHHHHHHHHhhhcCCCccEEEe----cCcHHHhhhC-CCCeEEEecc
Q 044031 78 T---------LSRADI----A---IESIK--LNSSNVFQALENISLTSKILSFII----TSTTSFSYHP-NIPTYTYFNS 134 (468)
Q Consensus 78 ~---------~~~~~~----~---~~~~~--~~~~~l~~ll~~~~~~~~pD~vI~----~~~~~vA~~l-gIP~i~~~~~ 134 (468)
. .+.... + ...++ ...+.+.++++. ++.++|++|+ .++..+|+++ ++|.|.+++.
T Consensus 90 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~L~~--~~~kFDlvi~e~~~~c~~~la~~~~~~p~i~~ss~ 167 (507)
T PHA03392 90 SAVFRKRGVVADSSTVTADNYMGLVRMISDQFDLPNVKNLIAN--KNNKFDLLVTEAFLDYPLVFSHLFGDAPVIQISSG 167 (507)
T ss_pred hhHHHhhhhhhhHHHHHHHHHHHHHHHHHHHHCCHHHHHHHhc--CCCceeEEEecccchhHHHHHHHhCCCCEEEEcCC
Confidence 0 000000 0 11111 112334444431 1348999999 6677799999 9998777664
Q ss_pred hhHHHHHHHhhhhhhhcccCCCCCCCCccccCCCCCCCCCCCCCccccCCCchh---------HHH-------HH-HHh-
Q 044031 135 CASTLAAILYLPTLHNQITSSFKDHPSSLLFIPGLPPVKSSFMPEPVLDRQKPI---------YDF-------FL-NYS- 196 (468)
Q Consensus 135 ~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~pg~~~~~~~~l~~~~~~~~~~~---------~~~-------~~-~~~- 196 (468)
........ .+. +.+..+..+|.........+ . +.+|...+ +.. +. +.+
T Consensus 168 ~~~~~~~~----~~g--------g~p~~~syvP~~~~~~~~~M-s-f~~R~~N~~~~~~~~~~~~~~~~~~~~l~~~~f~ 233 (507)
T PHA03392 168 YGLAENFE----TMG--------AVSRHPVYYPNLWRSKFGNL-N-VWETINEIYTELRLYNEFSLLADEQNKLLKQQFG 233 (507)
T ss_pred CCchhHHH----hhc--------cCCCCCeeeCCcccCCCCCC-C-HHHHHHHHHHHHHHHHHHHHhhHHHHHHHHHHcC
Confidence 43321110 000 00111122232211111111 0 11111000 000 00 000
Q ss_pred -------hhhcccceEEecChhhhhHHHHHHHHcCcccCCCCCCCeeEecccccCCcCCCCCCCCCCcchhHHhhcCCCC
Q 044031 197 -------TSLSKSNGIIINTFDFLEQQAIKAIVNGDCVTNGTTPPLHCIGPLIVDAKDRAGGVSDDVSSDCLTWLDSQPS 269 (468)
Q Consensus 197 -------~~~~~~~~~l~~s~~~le~~~~~~~~~~~~~~~~~~p~~~~VGpl~~~~~~~~~~~~~~~~~~l~~~l~~~~~ 269 (468)
....+...+++|+...++.+ .+.+|++++|||++.+..... + +++++.+|++++++
T Consensus 234 ~~~~~~~~l~~~~~l~lvns~~~~d~~------------rp~~p~v~~vGgi~~~~~~~~-~----l~~~l~~fl~~~~~ 296 (507)
T PHA03392 234 PDTPTIRELRNRVQLLFVNVHPVFDNN------------RPVPPSVQYLGGLHLHKKPPQ-P----LDDYLEEFLNNSTN 296 (507)
T ss_pred CCCCCHHHHHhCCcEEEEecCccccCC------------CCCCCCeeeecccccCCCCCC-C----CCHHHHHHHhcCCC
Confidence 00112233445555444432 223589999999987532111 2 78899999998653
Q ss_pred CceEEeccCCCc---CCCHHHHHHHHHHHHhCCCcEEEEEeCCCCccccCCChhHHhhccCCCeEecCCCCHHhhhCccC
Q 044031 270 GSVVFLCFGSRG---TFSAPQLKEIAIGLERSNQRFLWVVRNPSNAAEAELPEGFLERTKERGLVVKSWAPQSTILGHES 346 (468)
Q Consensus 270 ~~~v~vs~GS~~---~~~~~~~~~~~~al~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~pq~~il~~~~ 346 (468)
++|||||||+. ..+.+.+..+++++++.+++|||+++... .+ ...++|+.+.+|+||.+||+|++
T Consensus 297 -g~V~vS~GS~~~~~~~~~~~~~~~l~a~~~l~~~viw~~~~~~------~~-----~~~p~Nv~i~~w~Pq~~lL~hp~ 364 (507)
T PHA03392 297 -GVVYVSFGSSIDTNDMDNEFLQMLLRTFKKLPYNVLWKYDGEV------EA-----INLPANVLTQKWFPQRAVLKHKN 364 (507)
T ss_pred -cEEEEECCCCCcCCCCCHHHHHHHHHHHHhCCCeEEEEECCCc------Cc-----ccCCCceEEecCCCHHHHhcCCC
Confidence 59999999985 35678889999999999999999988640 11 01356888999999999999999
Q ss_pred cceEEecCCcchHHHHHHhCCcEEecccccchhhHHHHHHhhcceeeeeccCCcccccCCCCccccHHHHHHHHHHHhcC
Q 044031 347 VGGFVTHCGWSSVVEAVTYGVPMIAWPLYAEQFLNSVALVQEMKVAMPMFLNGEEETIGNGEGVVSAERVEERVRELMMG 426 (468)
Q Consensus 347 ~~~~ithgG~~s~~eal~~GvP~v~~P~~~DQ~~na~~~~~~~g~g~~~~~~~~~~~~~~~~~~~~~~~l~~av~~~l~~ 426 (468)
+++||||||+||++||+++|||+|++|+++||+.||+++++ +|+|+.++. .+ +++++|.++|+++|+|
T Consensus 365 v~~fItHGG~~s~~Eal~~GvP~v~iP~~~DQ~~Na~rv~~-~G~G~~l~~--------~~---~t~~~l~~ai~~vl~~ 432 (507)
T PHA03392 365 VKAFVTQGGVQSTDEAIDALVPMVGLPMMGDQFYNTNKYVE-LGIGRALDT--------VT---VSAAQLVLAIVDVIEN 432 (507)
T ss_pred CCEEEecCCcccHHHHHHcCCCEEECCCCccHHHHHHHHHH-cCcEEEecc--------CC---cCHHHHHHHHHHHhCC
Confidence 99999999999999999999999999999999999999975 599999985 56 8999999999999999
Q ss_pred chhHHHHHHHHHHHHHHHHh
Q 044031 427 SEGKALRERSLEMRMMAATA 446 (468)
Q Consensus 427 ~~~~~~~~~a~~l~~~~~~a 446 (468)
+ +||+||+++++.+++.
T Consensus 433 ~---~y~~~a~~ls~~~~~~ 449 (507)
T PHA03392 433 P---KYRKNLKELRHLIRHQ 449 (507)
T ss_pred H---HHHHHHHHHHHHHHhC
Confidence 9 9999999999999873
No 23
>PF00201 UDPGT: UDP-glucoronosyl and UDP-glucosyl transferase; InterPro: IPR002213 UDP glycosyltransferases (UGT) are a superfamily of enzymes that catalyzes the addition of the glycosyl group from a UTP-sugar to a small hydrophobic molecule. This family currently consist of: Mammalian UDP-glucuronosyl transferases (2.4.1.17 from EC) (UDPGT) []. A large family of membrane-bound microsomal enzymes which catalyze the transfer of glucuronic acid to a wide variety of exogenous and endogenous lipophilic substrates. These enzymes are of major importance in the detoxification and subsequent elimination of xenobiotics such as drugs and carcinogens. A large number of putative UDPGT from Caenorhabditis elegans. Mammalian 2-hydroxyacylsphingosine 1-beta-galactosyltransferase [] (2.4.1.45 from EC) (also known as UDP-galactose-ceramide galactosyltransferase). This enzyme catalyzes the transfer of galactose to ceramide, a key enzymatic step in the biosynthesis of galactocerebrosides, which are abundant sphingolipids of the myelin membrane of the central nervous system and peripheral nervous system. Plants flavonol O(3)-glucosyltransferase (2.4.1.91 from EC). An enzyme [] that catalyzes the transfer of glucose from UDP-glucose to a flavanol. This reaction is essential and one of the last steps in anthocyanin pigment biosynthesis. Baculoviruses ecdysteroid UDP-glucosyltransferase (2.4.1 from EC) [] (egt). This enzyme catalyzes the transfer of glucose from UDP-glucose to ectysteroids which are insect molting hormones. The expression of egt in the insect host interferes with the normal insect development by blocking the molting process. Prokaryotic zeaxanthin glucosyltransferase (2.4.1 from EC) (gene crtX), an enzyme involved in carotenoid biosynthesis and that catalyses the glycosylation reaction which converts zeaxanthin to zeaxanthin-beta-diglucoside. Streptomyces macrolide glycosyltransferases (2.4.1 from EC) []. These enzymes specifically inactivates macrolide anitibiotics via 2'-O-glycosylation using UDP-glucose. These enzymes share a conserved domain of about 50 amino acid residues located in their C-terminal section.; GO: 0016758 transferase activity, transferring hexosyl groups, 0008152 metabolic process; PDB: 3HBJ_A 3HBF_A 2PQ6_A 3IA7_B 3RSC_A 3IAA_B 2IYA_A 2IYF_B 2O6L_A 2VCH_A ....
Probab=100.00 E-value=7.5e-45 Score=371.75 Aligned_cols=181 Identities=28% Similarity=0.487 Sum_probs=144.6
Q ss_pred CCCeeEecccccCCcCCCCCCCCCCcchhHHhhcCCCCCceEEeccCCCcCC-CHHHHHHHHHHHHhCCCcEEEEEeCCC
Q 044031 232 TPPLHCIGPLIVDAKDRAGGVSDDVSSDCLTWLDSQPSGSVVFLCFGSRGTF-SAPQLKEIAIGLERSNQRFLWVVRNPS 310 (468)
Q Consensus 232 ~p~~~~VGpl~~~~~~~~~~~~~~~~~~l~~~l~~~~~~~~v~vs~GS~~~~-~~~~~~~~~~al~~~~~~~l~~~~~~~ 310 (468)
.|++++||+++.... ++ ++.++.+|++...++++|||||||+... +.+.+++++++|++.+++|||++++.
T Consensus 245 ~p~v~~vGgl~~~~~-~~------l~~~~~~~~~~~~~~~vv~vsfGs~~~~~~~~~~~~~~~~~~~~~~~~iW~~~~~- 316 (500)
T PF00201_consen 245 LPNVVEVGGLHIKPA-KP------LPEELWNFLDSSGKKGVVYVSFGSIVSSMPEEKLKEIAEAFENLPQRFIWKYEGE- 316 (500)
T ss_dssp HCTSTTGCGC-S-----T------CHHHHHHHTSTTTTTEEEEEE-TSSSTT-HHHHHHHHHHHHHCSTTEEEEEETCS-
T ss_pred hhcccccCccccccc-cc------cccccchhhhccCCCCEEEEecCcccchhHHHHHHHHHHHHhhCCCccccccccc-
Confidence 488999999987543 22 7889999999855566999999999743 44557889999999999999999763
Q ss_pred CccccCCChhHHhhccCCCeEecCCCCHHhhhCccCcceEEecCCcchHHHHHHhCCcEEecccccchhhHHHHHHhhcc
Q 044031 311 NAAEAELPEGFLERTKERGLVVKSWAPQSTILGHESVGGFVTHCGWSSVVEAVTYGVPMIAWPLYAEQFLNSVALVQEMK 390 (468)
Q Consensus 311 ~~~~~~~~~~~~~~~~~~~~~v~~~~pq~~il~~~~~~~~ithgG~~s~~eal~~GvP~v~~P~~~DQ~~na~~~~~~~g 390 (468)
.+.. .++|+.+.+|+||.+||+|+++++||||||+||++||+++|||||++|+++||+.||+++++. |
T Consensus 317 ------~~~~-----l~~n~~~~~W~PQ~~lL~hp~v~~fitHgG~~s~~Ea~~~gvP~l~~P~~~DQ~~na~~~~~~-G 384 (500)
T PF00201_consen 317 ------PPEN-----LPKNVLIVKWLPQNDLLAHPRVKLFITHGGLNSTQEALYHGVPMLGIPLFGDQPRNAARVEEK-G 384 (500)
T ss_dssp ------HGCH-----HHTTEEEESS--HHHHHTSTTEEEEEES--HHHHHHHHHCT--EEE-GCSTTHHHHHHHHHHT-T
T ss_pred ------cccc-----ccceEEEeccccchhhhhcccceeeeeccccchhhhhhhccCCccCCCCcccCCccceEEEEE-e
Confidence 1112 235788889999999999999999999999999999999999999999999999999999765 9
Q ss_pred eeeeeccCCcccccCCCCccccHHHHHHHHHHHhcCchhHHHHHHHHHHHHHHHHh
Q 044031 391 VAMPMFLNGEEETIGNGEGVVSAERVEERVRELMMGSEGKALRERSLEMRMMAATA 446 (468)
Q Consensus 391 ~g~~~~~~~~~~~~~~~~~~~~~~~l~~av~~~l~~~~~~~~~~~a~~l~~~~~~a 446 (468)
+|+.++. .+ +|+++|.++|+++|+|+ +|++||+++++++++-
T Consensus 385 ~g~~l~~--------~~---~~~~~l~~ai~~vl~~~---~y~~~a~~ls~~~~~~ 426 (500)
T PF00201_consen 385 VGVVLDK--------ND---LTEEELRAAIREVLENP---SYKENAKRLSSLFRDR 426 (500)
T ss_dssp SEEEEGG--------GC----SHHHHHHHHHHHHHSH---HHHHHHHHHHHTTT--
T ss_pred eEEEEEe--------cC---CcHHHHHHHHHHHHhhh---HHHHHHHHHHHHHhcC
Confidence 9999985 46 99999999999999999 9999999999988863
No 24
>KOG1192 consensus UDP-glucuronosyl and UDP-glucosyl transferase [Carbohydrate transport and metabolism; Energy production and conversion]
Probab=100.00 E-value=6.4e-42 Score=350.20 Aligned_cols=406 Identities=27% Similarity=0.379 Sum_probs=241.0
Q ss_pred ceEEEecCCCccCHHHHHHHHHHHHhCCCCcEEEEEeCCCCCCchhhhhhhhccccCCCCCeeEEEcCCCCCCCCCCChh
Q 044031 3 KTIALYPGPAFHHMISMVELGKLILQHRSDVSITILVPSMPLEESKTCSYINSISHRLNPIISFYYLPAIQMPSETLSRA 82 (468)
Q Consensus 3 ~~Iv~~~~~~~GHv~P~l~LA~~L~~~G~~h~Vt~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~i~~~~lp~~~~~~~ 82 (468)
.|++++++|++||++|++.||++|+++| |+||++++.......................+.+...+.. ++.......
T Consensus 6 ~~~il~~~p~~sH~~~~~~la~~L~~~g--h~vt~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~ 82 (496)
T KOG1192|consen 6 AHNILVPFPGQSHLNPMLQLAKRLAERG--HNVTVVTPSFNALKLSKSSKSKSIKKINPPPFEFLTIPDG-LPEGWEDDD 82 (496)
T ss_pred ceeEEEECCcccHHHHHHHHHHHHHHcC--CceEEEEeechhcccCCcccceeeeeeecChHHhhhhhhh-hccchHHHH
Confidence 5899999999999999999999999999 9999997765332110000000000000011111111111 222222111
Q ss_pred -HH---HHHHHHHhhHHHHHHHHhhhc--CCCccEEEe----cCcHHHhhhCC-CCeEEEecchhHHHHHHHhhhhhhhc
Q 044031 83 -DI---AIESIKLNSSNVFQALENISL--TSKILSFII----TSTTSFSYHPN-IPTYTYFNSCASTLAAILYLPTLHNQ 151 (468)
Q Consensus 83 -~~---~~~~~~~~~~~l~~ll~~~~~--~~~pD~vI~----~~~~~vA~~lg-IP~i~~~~~~~~~~~~~~~~p~~~~~ 151 (468)
.. .......+...+.+.+..+.. ..++|++|+ .|...+|...+ |+...++..++.........+...
T Consensus 83 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~i~d~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~g~~~~~~~-- 160 (496)
T KOG1192|consen 83 LDISESLLELNKTCEDLLRDPLEKLLLLKSEKFDLIISDPFLGLFLLLAIPSFVIPLLSFPTSSAVLLALGLPSPLSY-- 160 (496)
T ss_pred HHHHHHHHHHHHHHHHHHhchHHHHHHhhcCCccEEEechhhHHHHHhcccceEEEeecccCchHHHHhcCCcCcccc--
Confidence 00 122233333344443433332 234999999 34555676664 888888888777665543222110
Q ss_pred ccCCCCCCCCccccCCCCC-CCCCCCCCccccCCC-chhHHHHH-HHhhhh----cccceEEecC-hhhhhHHHHHHHHc
Q 044031 152 ITSSFKDHPSSLLFIPGLP-PVKSSFMPEPVLDRQ-KPIYDFFL-NYSTSL----SKSNGIIINT-FDFLEQQAIKAIVN 223 (468)
Q Consensus 152 ~~~~~~~~~~~~~~~pg~~-~~~~~~l~~~~~~~~-~~~~~~~~-~~~~~~----~~~~~~l~~s-~~~le~~~~~~~~~ 223 (468)
..............+++.. ++....++....... ........ ...... .....++.++ +..++......+..
T Consensus 161 ~p~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~ln~~~~~~~~~ 240 (496)
T KOG1192|consen 161 VPSPFSLSSGDDMSFPERVPNLIKKDLPSFLFSLSDDRKQDKISKELLGDILNWKPTASGIIVNASFIFLNSNPLLDFEP 240 (496)
T ss_pred cCcccCccccccCcHHHHHHHHHHHHHHHHHHHHhhhHHHHHHHHHhCCCcccccccHHHhhhcCeEEEEccCcccCCCC
Confidence 0000000000000000000 000000000000000 00000000 000000 1122334444 55555443211111
Q ss_pred CcccCCCCCCCeeEecccccCCcCCCCCCCCCCcchhHHhhcCCCCC--ceEEeccCCCc---CCCHHHHHHHHHHHHhC
Q 044031 224 GDCVTNGTTPPLHCIGPLIVDAKDRAGGVSDDVSSDCLTWLDSQPSG--SVVFLCFGSRG---TFSAPQLKEIAIGLERS 298 (468)
Q Consensus 224 ~~~~~~~~~p~~~~VGpl~~~~~~~~~~~~~~~~~~l~~~l~~~~~~--~~v~vs~GS~~---~~~~~~~~~~~~al~~~ 298 (468)
.+..+++++|||++.... .. ....+.+|++..+.+ ++|||||||+. ..+.++..+++.+|+..
T Consensus 241 -----~~~~~~v~~IG~l~~~~~-~~------~~~~~~~wl~~~~~~~~~vvyvSfGS~~~~~~lp~~~~~~l~~~l~~~ 308 (496)
T KOG1192|consen 241 -----RPLLPKVIPIGPLHVKDS-KQ------KSPLPLEWLDILDESRHSVVYISFGSMVNSADLPEEQKKELAKALESL 308 (496)
T ss_pred -----CCCCCCceEECcEEecCc-cc------cccccHHHHHHHhhccCCeEEEECCcccccccCCHHHHHHHHHHHHhC
Confidence 112488999999998743 11 122567777776654 79999999998 79999999999999999
Q ss_pred -CCcEEEEEeCCCCccccCCChhHHhhccCCCeEecCCCCHHhh-hCccCcceEEecCCcchHHHHHHhCCcEEeccccc
Q 044031 299 -NQRFLWVVRNPSNAAEAELPEGFLERTKERGLVVKSWAPQSTI-LGHESVGGFVTHCGWSSVVEAVTYGVPMIAWPLYA 376 (468)
Q Consensus 299 -~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~pq~~i-l~~~~~~~~ithgG~~s~~eal~~GvP~v~~P~~~ 376 (468)
+++|+|+++... ...+++++.++ ...|++..+|+||.++ |+|+++++||||||||||+|++++|||+|++|+++
T Consensus 309 ~~~~FiW~~~~~~---~~~~~~~~~~~-~~~nV~~~~W~PQ~~lll~H~~v~~FvTHgG~nSt~E~~~~GvP~v~~Plf~ 384 (496)
T KOG1192|consen 309 QGVTFLWKYRPDD---SIYFPEGLPNR-GRGNVVLSKWAPQNDLLLDHPAVGGFVTHGGWNSTLESIYSGVPMVCVPLFG 384 (496)
T ss_pred CCceEEEEecCCc---chhhhhcCCCC-CcCceEEecCCCcHHHhcCCCcCcEEEECCcccHHHHHHhcCCceecCCccc
Confidence 889999999751 11134444433 2346777799999999 59999999999999999999999999999999999
Q ss_pred chhhHHHHHHhhcceeeeeccCCcccccCCCCccccHHHHHHHHHHHhcCchhHHHHHHHHHHHHHHH
Q 044031 377 EQFLNSVALVQEMKVAMPMFLNGEEETIGNGEGVVSAERVEERVRELMMGSEGKALRERSLEMRMMAA 444 (468)
Q Consensus 377 DQ~~na~~~~~~~g~g~~~~~~~~~~~~~~~~~~~~~~~l~~av~~~l~~~~~~~~~~~a~~l~~~~~ 444 (468)
||+.||+++++++++++... .+ ++.+.+.+++.++++++ +|+++|+++++..+
T Consensus 385 DQ~~Na~~i~~~g~~~v~~~---------~~---~~~~~~~~~~~~il~~~---~y~~~~~~l~~~~~ 437 (496)
T KOG1192|consen 385 DQPLNARLLVRHGGGGVLDK---------RD---LVSEELLEAIKEILENE---EYKEAAKRLSEILR 437 (496)
T ss_pred cchhHHHHHHhCCCEEEEeh---------hh---cCcHHHHHHHHHHHcCh---HHHHHHHHHHHHHH
Confidence 99999999998866666665 23 55555999999999999 99999999999765
No 25
>TIGR01426 MGT glycosyltransferase, MGT family. This model describes the MGT (macroside glycosyltransferase) subfamily of the UDP-glucuronosyltransferase family. Members include a number of glucosyl transferases for macrolide antibiotic inactivation, but also include transferases of glucose-related sugars for macrolide antibiotic production.
Probab=100.00 E-value=6.8e-38 Score=310.55 Aligned_cols=346 Identities=18% Similarity=0.229 Sum_probs=222.3
Q ss_pred ecCCCccCHHHHHHHHHHHHhCCCCcEEEEEeCCCCCCchhhhhhhhccccCCCCCeeEEEcCCCCCCC--CC-----CC
Q 044031 8 YPGPAFHHMISMVELGKLILQHRSDVSITILVPSMPLEESKTCSYINSISHRLNPIISFYYLPAIQMPS--ET-----LS 80 (468)
Q Consensus 8 ~~~~~~GHv~P~l~LA~~L~~~G~~h~Vt~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~i~~~~lp~--~~-----~~ 80 (468)
+.+|+.||++|++.||++|+++| |+|+|+++....+ .+ ...+++|..++.. ++. .. .+
T Consensus 1 ~~~p~~Ghv~P~l~lA~~L~~~G--h~V~~~~~~~~~~------~v------~~~G~~~~~~~~~-~~~~~~~~~~~~~~ 65 (392)
T TIGR01426 1 FNIPAHGHVNPTLGVVEELVARG--HRVTYATTEEFAE------RV------EAAGAEFVLYGSA-LPPPDNPPENTEEE 65 (392)
T ss_pred CCCCccccccccHHHHHHHHhCC--CeEEEEeCHHHHH------HH------HHcCCEEEecCCc-CccccccccccCcc
Confidence 46799999999999999999999 9999997754322 22 2237888887754 221 11 11
Q ss_pred hhHHHHHHHHHhhHHHHHHHHhhhcCCCccEEEe----cCcHHHhhhCCCCeEEEecchhHHHHHHHhhhhhhhcccCCC
Q 044031 81 RADIAIESIKLNSSNVFQALENISLTSKILSFII----TSTTSFSYHPNIPTYTYFNSCASTLAAILYLPTLHNQITSSF 156 (468)
Q Consensus 81 ~~~~~~~~~~~~~~~l~~ll~~~~~~~~pD~vI~----~~~~~vA~~lgIP~i~~~~~~~~~~~~~~~~p~~~~~~~~~~ 156 (468)
....+..+.......+..++ +..++.+||+||+ .++..+|+++|||++.+.+...... ..+
T Consensus 66 ~~~~~~~~~~~~~~~~~~l~-~~~~~~~pDlVi~d~~~~~~~~~A~~~giP~v~~~~~~~~~~----~~~---------- 130 (392)
T TIGR01426 66 PIDIIEKLLDEAEDVLPQLE-EAYKGDRPDLIVYDIASWTGRLLARKWDVPVISSFPTFAANE----EFE---------- 130 (392)
T ss_pred hHHHHHHHHHHHHHHHHHHH-HHhcCCCCCEEEECCccHHHHHHHHHhCCCEEEEehhhcccc----ccc----------
Confidence 11112222222222222222 2223348999999 5677899999999998754321100 000
Q ss_pred CCCCCccccCCCCCCCCCCCCCc-cccCCCchhHHHHHHHhhhhcccce----------------EEecChhhhhHHHHH
Q 044031 157 KDHPSSLLFIPGLPPVKSSFMPE-PVLDRQKPIYDFFLNYSTSLSKSNG----------------IIINTFDFLEQQAIK 219 (468)
Q Consensus 157 ~~~~~~~~~~pg~~~~~~~~l~~-~~~~~~~~~~~~~~~~~~~~~~~~~----------------~l~~s~~~le~~~~~ 219 (468)
... ++.....+.. ....+. ...+.+..+...+..+ .+..+-..+.+
T Consensus 131 -------~~~---~~~~~~~~~~~~~~~~~---~~~~~~~~~~~r~~~gl~~~~~~~~~~~~~~~~l~~~~~~l~~---- 193 (392)
T TIGR01426 131 -------EMV---SPAGEGSAEEGAIAERG---LAEYVARLSALLEEHGITTPPVEFLAAPRRDLNLVYTPKAFQP---- 193 (392)
T ss_pred -------ccc---cccchhhhhhhccccch---hHHHHHHHHHHHHHhCCCCCCHHHHhcCCcCcEEEeCChHhCC----
Confidence 000 0000000000 000000 0111111111111111 11111111111
Q ss_pred HHHcCcccCCCC-CCCeeEecccccCCcCCCCCCCCCCcchhHHhhcCCCCCceEEeccCCCcCCCHHHHHHHHHHHHhC
Q 044031 220 AIVNGDCVTNGT-TPPLHCIGPLIVDAKDRAGGVSDDVSSDCLTWLDSQPSGSVVFLCFGSRGTFSAPQLKEIAIGLERS 298 (468)
Q Consensus 220 ~~~~~~~~~~~~-~p~~~~VGpl~~~~~~~~~~~~~~~~~~l~~~l~~~~~~~~v~vs~GS~~~~~~~~~~~~~~al~~~ 298 (468)
+... +++++++||+..... . ...|.....++++||||+||+.......+.++++++...
T Consensus 194 --------~~~~~~~~~~~~Gp~~~~~~-~-----------~~~~~~~~~~~~~v~vs~Gs~~~~~~~~~~~~~~al~~~ 253 (392)
T TIGR01426 194 --------AGETFDDSFTFVGPCIGDRK-E-----------DGSWERPGDGRPVVLISLGTVFNNQPSFYRTCVEAFRDL 253 (392)
T ss_pred --------CccccCCCeEEECCCCCCcc-c-----------cCCCCCCCCCCCEEEEecCccCCCCHHHHHHHHHHHhcC
Confidence 0111 357999999876432 1 112665556677999999998766666788899999999
Q ss_pred CCcEEEEEeCCCCccccCCChhHHhhccCCCeEecCCCCHHhhhCccCcceEEecCCcchHHHHHHhCCcEEecccccch
Q 044031 299 NQRFLWVVRNPSNAAEAELPEGFLERTKERGLVVKSWAPQSTILGHESVGGFVTHCGWSSVVEAVTYGVPMIAWPLYAEQ 378 (468)
Q Consensus 299 ~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~pq~~il~~~~~~~~ithgG~~s~~eal~~GvP~v~~P~~~DQ 378 (468)
+.+++|.++...+ .+.+. ..+.|+.+.+|+||.++|+|+++ ||||||+||++||+++|+|+|++|...||
T Consensus 254 ~~~~i~~~g~~~~------~~~~~--~~~~~v~~~~~~p~~~ll~~~~~--~I~hgG~~t~~Eal~~G~P~v~~p~~~dq 323 (392)
T TIGR01426 254 DWHVVLSVGRGVD------PADLG--ELPPNVEVRQWVPQLEILKKADA--FITHGGMNSTMEALFNGVPMVAVPQGADQ 323 (392)
T ss_pred CCeEEEEECCCCC------hhHhc--cCCCCeEEeCCCCHHHHHhhCCE--EEECCCchHHHHHHHhCCCEEecCCcccH
Confidence 9999999876411 01111 12457888899999999999887 99999999999999999999999999999
Q ss_pred hhHHHHHHhhcceeeeeccCCcccccCCCCccccHHHHHHHHHHHhcCchhHHHHHHHHHHHHHHHH
Q 044031 379 FLNSVALVQEMKVAMPMFLNGEEETIGNGEGVVSAERVEERVRELMMGSEGKALRERSLEMRMMAAT 445 (468)
Q Consensus 379 ~~na~~~~~~~g~g~~~~~~~~~~~~~~~~~~~~~~~l~~av~~~l~~~~~~~~~~~a~~l~~~~~~ 445 (468)
+.||++++ ++|+|+.+.. .+ ++.++|.++|+++|+|+ +|+++++++++.++.
T Consensus 324 ~~~a~~l~-~~g~g~~l~~--------~~---~~~~~l~~ai~~~l~~~---~~~~~~~~l~~~~~~ 375 (392)
T TIGR01426 324 PMTARRIA-ELGLGRHLPP--------EE---VTAEKLREAVLAVLSDP---RYAERLRKMRAEIRE 375 (392)
T ss_pred HHHHHHHH-HCCCEEEecc--------cc---CCHHHHHHHHHHHhcCH---HHHHHHHHHHHHHHH
Confidence 99999997 4699999873 45 89999999999999998 899999999998886
No 26
>cd03784 GT1_Gtf_like This family includes the Gtfs, a group of homologous glycosyltransferases involved in the final stages of the biosynthesis of antibiotics vancomycin and related chloroeremomycin. Gtfs transfer sugar moieties from an activated NDP-sugar donor to the oxidatively cross-linked heptapeptide core of vancomycin group antibiotics. The core structure is important for the bioactivity of the antibiotics.
Probab=100.00 E-value=3e-38 Score=314.52 Aligned_cols=364 Identities=11% Similarity=0.060 Sum_probs=220.7
Q ss_pred ceEEEecCCCccCHHHHHHHHHHHHhCCCCcEEEEEeCCCCCCchhhhhhhhccccCCCCCeeEEEcCCCCCCC---CCC
Q 044031 3 KTIALYPGPAFHHMISMVELGKLILQHRSDVSITILVPSMPLEESKTCSYINSISHRLNPIISFYYLPAIQMPS---ETL 79 (468)
Q Consensus 3 ~~Iv~~~~~~~GHv~P~l~LA~~L~~~G~~h~Vt~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~i~~~~lp~---~~~ 79 (468)
|||+|+++|+.||++|++.||++|+++| |+|+|+++..... .+ ...|++|..++.. .+. ...
T Consensus 1 mrIl~~~~p~~GHv~P~l~la~~L~~rG--h~V~~~t~~~~~~------~v------~~~G~~~~~~~~~-~~~~~~~~~ 65 (401)
T cd03784 1 MRVLITTIGSRGDVQPLVALAWALRAAG--HEVRVATPPEFAD------LV------EAAGLEFVPVGGD-PDELLASPE 65 (401)
T ss_pred CeEEEEeCCCcchHHHHHHHHHHHHHCC--CeEEEeeCHhHHH------HH------HHcCCceeeCCCC-HHHHHhhhh
Confidence 4699999999999999999999999999 9999997764322 22 2237888888764 211 000
Q ss_pred --------ChhHH---HHHHHHHhhHHHHHHHHhhhcCCCccEEEe----cCcHHHhhhCCCCeEEEecchhHHHHHHHh
Q 044031 80 --------SRADI---AIESIKLNSSNVFQALENISLTSKILSFII----TSTTSFSYHPNIPTYTYFNSCASTLAAILY 144 (468)
Q Consensus 80 --------~~~~~---~~~~~~~~~~~l~~ll~~~~~~~~pD~vI~----~~~~~vA~~lgIP~i~~~~~~~~~~~~~~~ 144 (468)
..... ...+.......+.++++.+ ++.+||+||+ +++..+|+++|||++.+++++....+..
T Consensus 66 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~pDlvi~d~~~~~~~~~A~~~giP~v~~~~~~~~~~~~~-- 142 (401)
T cd03784 66 RNAGLLLLGPGLLLGALRLLRREAEAMLDDLVAAA-RDWGPDLVVADPLAFAGAVAAEALGIPAVRLLLGPDTPTSAF-- 142 (401)
T ss_pred hcccccccchHHHHHHHHHHHHHHHHHHHHHHHHh-cccCCCEEEeCcHHHHHHHHHHHhCCCeEEeecccCCccccC--
Confidence 00010 1111112222233333322 2359999999 6677799999999999887553311100
Q ss_pred hhhhhhcccCCCCCCCCccccCCCCCCCCCC-CCCccccCCCchhHHHHHHHhhhhcccceEEecC-hhhhhHHHHHHHH
Q 044031 145 LPTLHNQITSSFKDHPSSLLFIPGLPPVKSS-FMPEPVLDRQKPIYDFFLNYSTSLSKSNGIIINT-FDFLEQQAIKAIV 222 (468)
Q Consensus 145 ~p~~~~~~~~~~~~~~~~~~~~pg~~~~~~~-~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~s-~~~le~~~~~~~~ 222 (468)
.++.... ......... ...............+..++-... +.......+..+.
T Consensus 143 ------------------------~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~gl~~~~~~~~~~~~~~~~~~ 197 (401)
T cd03784 143 ------------------------PPPLGRANLRLYALLEA-ELWQDLLGAWLRARRRRLGLPPLSLLDGSDVPELYGFS 197 (401)
T ss_pred ------------------------CCccchHHHHHHHHHHH-HHHHHHHHHHHHHHHHhcCCCCCcccccCCCcEEEecC
Confidence 0000000 000000000 000000000111111111100000 0000000000000
Q ss_pred cCcccCCCC-CCCeeEecc-cccCCcCCCCCCCCCCcchhHHhhcCCCCCceEEeccCCCcCCCH-HHHHHHHHHHHhCC
Q 044031 223 NGDCVTNGT-TPPLHCIGP-LIVDAKDRAGGVSDDVSSDCLTWLDSQPSGSVVFLCFGSRGTFSA-PQLKEIAIGLERSN 299 (468)
Q Consensus 223 ~~~~~~~~~-~p~~~~VGp-l~~~~~~~~~~~~~~~~~~l~~~l~~~~~~~~v~vs~GS~~~~~~-~~~~~~~~al~~~~ 299 (468)
+.+..+.+. .++..++|. +..... .. ..+.++..|++.. +++|||+|||+..... .....++++++..+
T Consensus 198 ~~~~~~~~~~~~~~~~~g~~~~~~~~-~~-----~~~~~~~~~~~~~--~~~v~v~~Gs~~~~~~~~~~~~~~~a~~~~~ 269 (401)
T cd03784 198 PAVLPPPPDWPRFDLVTGYGFRDVPY-NG-----PPPPELWLFLAAG--RPPVYVGFGSMVVRDPEALARLDVEAVATLG 269 (401)
T ss_pred cccCCCCCCccccCcEeCCCCCCCCC-CC-----CCCHHHHHHHhCC--CCcEEEeCCCCcccCHHHHHHHHHHHHHHcC
Confidence 111001111 235566653 332221 11 1566778888764 4599999999986554 45677999999999
Q ss_pred CcEEEEEeCCCCccccCCChhHHhhccCCCeEecCCCCHHhhhCccCcceEEecCCcchHHHHHHhCCcEEecccccchh
Q 044031 300 QRFLWVVRNPSNAAEAELPEGFLERTKERGLVVKSWAPQSTILGHESVGGFVTHCGWSSVVEAVTYGVPMIAWPLYAEQF 379 (468)
Q Consensus 300 ~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~pq~~il~~~~~~~~ithgG~~s~~eal~~GvP~v~~P~~~DQ~ 379 (468)
.++||+++.... .. ...++|+.+.+|+||.++|+|+++ ||||||+||++|++++|||+|++|+..||+
T Consensus 270 ~~~i~~~g~~~~-----~~-----~~~~~~v~~~~~~p~~~ll~~~d~--~I~hgG~~t~~eal~~GvP~v~~P~~~dQ~ 337 (401)
T cd03784 270 QRAILSLGWGGL-----GA-----EDLPDNVRVVDFVPHDWLLPRCAA--VVHHGGAGTTAAALRAGVPQLVVPFFGDQP 337 (401)
T ss_pred CeEEEEccCccc-----cc-----cCCCCceEEeCCCCHHHHhhhhhe--eeecCCchhHHHHHHcCCCEEeeCCCCCcH
Confidence 999999987511 00 113468889999999999999888 999999999999999999999999999999
Q ss_pred hHHHHHHhhcceeeeeccCCcccccCCCCccccHHHHHHHHHHHhcCchhHHHHHHHHHHHHHHHH
Q 044031 380 LNSVALVQEMKVAMPMFLNGEEETIGNGEGVVSAERVEERVRELMMGSEGKALRERSLEMRMMAAT 445 (468)
Q Consensus 380 ~na~~~~~~~g~g~~~~~~~~~~~~~~~~~~~~~~~l~~av~~~l~~~~~~~~~~~a~~l~~~~~~ 445 (468)
.||++++ ++|+|+.++. .+ ++.++|.++|+++++++ ++++++++++.+++
T Consensus 338 ~~a~~~~-~~G~g~~l~~--------~~---~~~~~l~~al~~~l~~~----~~~~~~~~~~~~~~ 387 (401)
T cd03784 338 FWAARVA-ELGAGPALDP--------RE---LTAERLAAALRRLLDPP----SRRRAAALLRRIRE 387 (401)
T ss_pred HHHHHHH-HCCCCCCCCc--------cc---CCHHHHHHHHHHHhCHH----HHHHHHHHHHHHHh
Confidence 9999997 5699999974 34 89999999999999854 56666666666643
No 27
>COG1819 Glycosyl transferases, related to UDP-glucuronosyltransferase [Carbohydrate transport and metabolism / Signal transduction mechanisms]
Probab=100.00 E-value=4.9e-37 Score=300.93 Aligned_cols=377 Identities=16% Similarity=0.194 Sum_probs=226.9
Q ss_pred ceEEEecCCCccCHHHHHHHHHHHHhCCCCcEEEEEeCCCCCCchhhhhhhhccccCCCCCeeEEEcCCCCCCCCCC-Ch
Q 044031 3 KTIALYPGPAFHHMISMVELGKLILQHRSDVSITILVPSMPLEESKTCSYINSISHRLNPIISFYYLPAIQMPSETL-SR 81 (468)
Q Consensus 3 ~~Iv~~~~~~~GHv~P~l~LA~~L~~~G~~h~Vt~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~i~~~~lp~~~~-~~ 81 (468)
+||+++..|+.||++|+++||++|.++| |+|+|+++....+ .++. .++.|...+....+.... ..
T Consensus 2 mkil~~~~~~~Ghv~p~~aL~~eL~~~g--heV~~~~~~~~~~------~ve~------ag~~f~~~~~~~~~~~~~~~~ 67 (406)
T COG1819 2 MKILFVVCGAYGHVNPCLALGKELRRRG--HEVVFASTGKFKE------FVEA------AGLAFVAYPIRDSELATEDGK 67 (406)
T ss_pred ceEEEEeccccccccchHHHHHHHHhcC--CeEEEEeCHHHHH------HHHH------hCcceeeccccCChhhhhhhh
Confidence 5799999999999999999999999999 9999997655332 2222 255555554321111111 00
Q ss_pred hHH---HHHHHH---HhhHHHHHHHHhhhcCCCccEEEe---cCcHHHhhhCCCCeEEEecchhHHHHHHHhhhhhhhcc
Q 044031 82 ADI---AIESIK---LNSSNVFQALENISLTSKILSFII---TSTTSFSYHPNIPTYTYFNSCASTLAAILYLPTLHNQI 152 (468)
Q Consensus 82 ~~~---~~~~~~---~~~~~l~~ll~~~~~~~~pD~vI~---~~~~~vA~~lgIP~i~~~~~~~~~~~~~~~~p~~~~~~ 152 (468)
... +..... .....+.+++.+. .+|.++. .+...+++.+++|++............. .
T Consensus 68 ~~~~~~~~~~~~~~~~~~~~~~~~~~e~----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~------~--- 134 (406)
T COG1819 68 FAGVKSFRRLLQQFKKLIRELLELLREL----EPDLVVDDARLSLGLAARLLGIPVVGINVAPYTPLPAA------G--- 134 (406)
T ss_pred hhccchhHHHhhhhhhhhHHHHHHHHhc----chhhhhcchhhhhhhhhhhcccchhhhhhhhccCCccc------c---
Confidence 000 110121 1222333344444 8888888 4455678888999887555433321111 0
Q ss_pred cCCCCCCCCccccCCCCCCCCCCCCCccc-----cCCCchhHHHHHHHhhhhccc---ceEEecChhhhhHHHHHHHHcC
Q 044031 153 TSSFKDHPSSLLFIPGLPPVKSSFMPEPV-----LDRQKPIYDFFLNYSTSLSKS---NGIIINTFDFLEQQAIKAIVNG 224 (468)
Q Consensus 153 ~~~~~~~~~~~~~~pg~~~~~~~~l~~~~-----~~~~~~~~~~~~~~~~~~~~~---~~~l~~s~~~le~~~~~~~~~~ 224 (468)
.+.....+-+....+...++... ..+.. ......+....+... ..-++.+-..++..+ .+.
T Consensus 135 ------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~----~~~ 203 (406)
T COG1819 135 ------LPLPPVGIAGKLPIPLYPLPPRLVRPLIFARSW-LPKLVVRRNLGLELGLPNIRRLFASGPLLEIAY----TDV 203 (406)
T ss_pred ------cCcccccccccccccccccChhhccccccchhh-hhhhhhhhhccccccccchHHHhcCCCCccccc----ccc
Confidence 00000000000011111111111 11100 000000000000000 000001111111111 111
Q ss_pred cccCC-CCCCCeeEecccccCCcCCCCCCCCCCcchhHHhhcCCCCCceEEeccCCCcCCCHHHHHHHHHHHHhCCCcEE
Q 044031 225 DCVTN-GTTPPLHCIGPLIVDAKDRAGGVSDDVSSDCLTWLDSQPSGSVVFLCFGSRGTFSAPQLKEIAIGLERSNQRFL 303 (468)
Q Consensus 225 ~~~~~-~~~p~~~~VGpl~~~~~~~~~~~~~~~~~~l~~~l~~~~~~~~v~vs~GS~~~~~~~~~~~~~~al~~~~~~~l 303 (468)
.+.|+ +.+....++||+..... .+...|.. .++++||||+||.... .+.+..++++++..+.++|
T Consensus 204 ~~~~~~~~p~~~~~~~~~~~~~~-----------~~~~~~~~--~d~~~vyvslGt~~~~-~~l~~~~~~a~~~l~~~vi 269 (406)
T COG1819 204 LFPPGDRLPFIGPYIGPLLGEAA-----------NELPYWIP--ADRPIVYVSLGTVGNA-VELLAIVLEALADLDVRVI 269 (406)
T ss_pred ccCCCCCCCCCcCcccccccccc-----------ccCcchhc--CCCCeEEEEcCCcccH-HHHHHHHHHHHhcCCcEEE
Confidence 11111 11223455566654432 22233433 3455999999999866 7888889999999999999
Q ss_pred EEEeCCCCccccCCChhHHhhccCCCeEecCCCCHHhhhCccCcceEEecCCcchHHHHHHhCCcEEecccccchhhHHH
Q 044031 304 WVVRNPSNAAEAELPEGFLERTKERGLVVKSWAPQSTILGHESVGGFVTHCGWSSVVEAVTYGVPMIAWPLYAEQFLNSV 383 (468)
Q Consensus 304 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~pq~~il~~~~~~~~ithgG~~s~~eal~~GvP~v~~P~~~DQ~~na~ 383 (468)
..++.. +.....+ +.|+++.+|+||.++|+++++ ||||||+|||+|||++|||+|++|...||+.||.
T Consensus 270 ~~~~~~-~~~~~~~---------p~n~~v~~~~p~~~~l~~ad~--vI~hGG~gtt~eaL~~gvP~vv~P~~~DQ~~nA~ 337 (406)
T COG1819 270 VSLGGA-RDTLVNV---------PDNVIVADYVPQLELLPRADA--VIHHGGAGTTSEALYAGVPLVVIPDGADQPLNAE 337 (406)
T ss_pred Eecccc-ccccccC---------CCceEEecCCCHHHHhhhcCE--EEecCCcchHHHHHHcCCCEEEecCCcchhHHHH
Confidence 998762 1112223 457889999999999999999 9999999999999999999999999999999999
Q ss_pred HHHhhcceeeeeccCCcccccCCCCccccHHHHHHHHHHHhcCchhHHHHHHHHHHHHHHHHhhcCCCCCChHHHHHHHH
Q 044031 384 ALVQEMKVAMPMFLNGEEETIGNGEGVVSAERVEERVRELMMGSEGKALRERSLEMRMMAATAWNNNDGGSSFTAFSNLF 463 (468)
Q Consensus 384 ~~~~~~g~g~~~~~~~~~~~~~~~~~~~~~~~l~~av~~~l~~~~~~~~~~~a~~l~~~~~~a~~~~~~g~~~~~~~~~~ 463 (468)
+++ ++|+|+.+.. .+ ++.+.++++|+++|+|+ .|+++++++++.+++ ++| .+.+.+.+
T Consensus 338 rve-~~G~G~~l~~--------~~---l~~~~l~~av~~vL~~~---~~~~~~~~~~~~~~~-----~~g--~~~~a~~l 395 (406)
T COG1819 338 RVE-ELGAGIALPF--------EE---LTEERLRAAVNEVLADD---SYRRAAERLAEEFKE-----EDG--PAKAADLL 395 (406)
T ss_pred HHH-HcCCceecCc--------cc---CCHHHHHHHHHHHhcCH---HHHHHHHHHHHHhhh-----ccc--HHHHHHHH
Confidence 996 5699999985 46 99999999999999999 999999999999998 455 34455555
Q ss_pred HH
Q 044031 464 DL 465 (468)
Q Consensus 464 ~~ 465 (468)
++
T Consensus 396 e~ 397 (406)
T COG1819 396 EE 397 (406)
T ss_pred HH
Confidence 44
No 28
>PRK12446 undecaprenyldiphospho-muramoylpentapeptide beta-N-acetylglucosaminyltransferase; Reviewed
Probab=99.97 E-value=2e-28 Score=237.15 Aligned_cols=320 Identities=15% Similarity=0.187 Sum_probs=205.8
Q ss_pred CcceEEEecCCCccCHHHHHHHHHHHHhCCCCcEEEEEeCCCCCCchhhhhhhhccccCCCCCeeEEEcCCCCCCCCCCC
Q 044031 1 MKKTIALYPGPAFHHMISMVELGKLILQHRSDVSITILVPSMPLEESKTCSYINSISHRLNPIISFYYLPAIQMPSETLS 80 (468)
Q Consensus 1 m~~~Iv~~~~~~~GHv~P~l~LA~~L~~~G~~h~Vt~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~i~~~~lp~~~~~ 80 (468)
|| +|++...|+.||++|.+++|++|.++| |+|+|++.....+...+ ...++.+..++...+.... .
T Consensus 1 ~~-~i~~~~GGTGGHi~Pala~a~~l~~~g--~~v~~vg~~~~~e~~l~----------~~~g~~~~~~~~~~l~~~~-~ 66 (352)
T PRK12446 1 MK-KIVFTGGGSAGHVTPNLAIIPYLKEDN--WDISYIGSHQGIEKTII----------EKENIPYYSISSGKLRRYF-D 66 (352)
T ss_pred CC-eEEEEcCCcHHHHHHHHHHHHHHHhCC--CEEEEEECCCccccccC----------cccCCcEEEEeccCcCCCc-h
Confidence 64 799999999999999999999999999 99999986654432211 1226777777654343211 1
Q ss_pred hhHH-HHHHHHHhhHHHHHHHHhhhcCCCccEEEe---c---CcHHHhhhCCCCeEEEecchhHHHHHHHhhhhhhhccc
Q 044031 81 RADI-AIESIKLNSSNVFQALENISLTSKILSFII---T---STTSFSYHPNIPTYTYFNSCASTLAAILYLPTLHNQIT 153 (468)
Q Consensus 81 ~~~~-~~~~~~~~~~~l~~ll~~~~~~~~pD~vI~---~---~~~~vA~~lgIP~i~~~~~~~~~~~~~~~~p~~~~~~~ 153 (468)
...+ ....+-...-....+++++ +||+||+ + ++..+|..+++|++++....
T Consensus 67 ~~~~~~~~~~~~~~~~~~~i~~~~----kPdvvi~~Ggy~s~p~~~aa~~~~~p~~i~e~n~------------------ 124 (352)
T PRK12446 67 LKNIKDPFLVMKGVMDAYVRIRKL----KPDVIFSKGGFVSVPVVIGGWLNRVPVLLHESDM------------------ 124 (352)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHhc----CCCEEEecCchhhHHHHHHHHHcCCCEEEECCCC------------------
Confidence 1111 1111122233445566666 9999999 2 23567777999998865422
Q ss_pred CCCCCCCCccccCCCCCCCCCCCCCccccCCCchhHHHHHHHhhhhcccceEEecChhhhhHHHHHHHHcCcccCCCCCC
Q 044031 154 SSFKDHPSSLLFIPGLPPVKSSFMPEPVLDRQKPIYDFFLNYSTSLSKSNGIIINTFDFLEQQAIKAIVNGDCVTNGTTP 233 (468)
Q Consensus 154 ~~~~~~~~~~~~~pg~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~s~~~le~~~~~~~~~~~~~~~~~~p 233 (468)
+||+. .+...+....++.+|++.... + +..
T Consensus 125 ------------~~g~~-------------------------nr~~~~~a~~v~~~f~~~~~~----~---------~~~ 154 (352)
T PRK12446 125 ------------TPGLA-------------------------NKIALRFASKIFVTFEEAAKH----L---------PKE 154 (352)
T ss_pred ------------CccHH-------------------------HHHHHHhhCEEEEEccchhhh----C---------CCC
Confidence 22221 111111112344555432111 1 014
Q ss_pred CeeEecccccCCcCCCCCCCCCCcchhHHhhcCCCCCceEEeccCCCcCCCHHH-HHHHHHHHHhCCCcEEEEEeCCCCc
Q 044031 234 PLHCIGPLIVDAKDRAGGVSDDVSSDCLTWLDSQPSGSVVFLCFGSRGTFSAPQ-LKEIAIGLERSNQRFLWVVRNPSNA 312 (468)
Q Consensus 234 ~~~~VGpl~~~~~~~~~~~~~~~~~~l~~~l~~~~~~~~v~vs~GS~~~~~~~~-~~~~~~al~~~~~~~l~~~~~~~~~ 312 (468)
+++++|+++.+..... ......+.+.-.+++++|+|..||+++...++ +.+++..+. .+.+++|++|.+.
T Consensus 155 k~~~tG~Pvr~~~~~~------~~~~~~~~~~l~~~~~~iLv~GGS~Ga~~in~~~~~~l~~l~-~~~~vv~~~G~~~-- 225 (352)
T PRK12446 155 KVIYTGSPVREEVLKG------NREKGLAFLGFSRKKPVITIMGGSLGAKKINETVREALPELL-LKYQIVHLCGKGN-- 225 (352)
T ss_pred CeEEECCcCCcccccc------cchHHHHhcCCCCCCcEEEEECCccchHHHHHHHHHHHHhhc-cCcEEEEEeCCch--
Confidence 7889999987654211 12222222333345669999999999766644 344555553 2488999999750
Q ss_pred cccCCChhHHhhccCCCeEecCCC-C-HHhhhCccCcceEEecCCcchHHHHHHhCCcEEecccc-----cchhhHHHHH
Q 044031 313 AEAELPEGFLERTKERGLVVKSWA-P-QSTILGHESVGGFVTHCGWSSVVEAVTYGVPMIAWPLY-----AEQFLNSVAL 385 (468)
Q Consensus 313 ~~~~~~~~~~~~~~~~~~~v~~~~-p-q~~il~~~~~~~~ithgG~~s~~eal~~GvP~v~~P~~-----~DQ~~na~~~ 385 (468)
+.+... . ..+..+.+|+ + -.++++++++ +|||||.+|++|++++|+|+|++|+. +||..||+.+
T Consensus 226 ----~~~~~~-~--~~~~~~~~f~~~~m~~~~~~adl--vIsr~G~~t~~E~~~~g~P~I~iP~~~~~~~~~Q~~Na~~l 296 (352)
T PRK12446 226 ----LDDSLQ-N--KEGYRQFEYVHGELPDILAITDF--VISRAGSNAIFEFLTLQKPMLLIPLSKFASRGDQILNAESF 296 (352)
T ss_pred ----HHHHHh-h--cCCcEEecchhhhHHHHHHhCCE--EEECCChhHHHHHHHcCCCEEEEcCCCCCCCchHHHHHHHH
Confidence 101011 1 1244455777 4 4468888888 99999999999999999999999984 5899999999
Q ss_pred HhhcceeeeeccCCcccccCCCCccccHHHHHHHHHHHhcCchhHHHHHHHHH
Q 044031 386 VQEMKVAMPMFLNGEEETIGNGEGVVSAERVEERVRELMMGSEGKALRERSLE 438 (468)
Q Consensus 386 ~~~~g~g~~~~~~~~~~~~~~~~~~~~~~~l~~av~~~l~~~~~~~~~~~a~~ 438 (468)
++ .|+|..+.. ++ ++.+.|.+++.++++|++ .|++++++
T Consensus 297 ~~-~g~~~~l~~--------~~---~~~~~l~~~l~~ll~~~~--~~~~~~~~ 335 (352)
T PRK12446 297 ER-QGYASVLYE--------ED---VTVNSLIKHVEELSHNNE--KYKTALKK 335 (352)
T ss_pred HH-CCCEEEcch--------hc---CCHHHHHHHHHHHHcCHH--HHHHHHHH
Confidence 86 499999873 56 899999999999998763 45544433
No 29
>COG0707 MurG UDP-N-acetylglucosamine:LPS N-acetylglucosamine transferase [Cell envelope biogenesis, outer membrane]
Probab=99.94 E-value=8.4e-25 Score=209.17 Aligned_cols=322 Identities=17% Similarity=0.159 Sum_probs=211.8
Q ss_pred eEEEecCCCccCHHHHHHHHHHHHhCCCCc-EEEEEeCCCCCCchhhhhhhhccccCCCCCeeEEEcCCCCCCCCCCChh
Q 044031 4 TIALYPGPAFHHMISMVELGKLILQHRSDV-SITILVPSMPLEESKTCSYINSISHRLNPIISFYYLPAIQMPSETLSRA 82 (468)
Q Consensus 4 ~Iv~~~~~~~GHv~P~l~LA~~L~~~G~~h-~Vt~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~i~~~~lp~~~~~~~ 82 (468)
.|++...++-||+.|.++|+++|.++| + +|.++.+....+.... ...++.+..|+...+..... ..
T Consensus 2 ~ivl~~gGTGGHv~pAlAl~~~l~~~g--~~~v~~~~~~~~~e~~l~----------~~~~~~~~~I~~~~~~~~~~-~~ 68 (357)
T COG0707 2 KIVLTAGGTGGHVFPALALAEELAKRG--WEQVIVLGTGDGLEAFLV----------KQYGIEFELIPSGGLRRKGS-LK 68 (357)
T ss_pred eEEEEeCCCccchhHHHHHHHHHHhhC--ccEEEEecccccceeeec----------cccCceEEEEecccccccCc-HH
Confidence 489999999999999999999999999 7 5777754443332111 22378888887774443221 11
Q ss_pred HH-HHHHHHHhhHHHHHHHHhhhcCCCccEEEe------cCcHHHhhhCCCCeEEEecchhHHHHHHHhhhhhhhcccCC
Q 044031 83 DI-AIESIKLNSSNVFQALENISLTSKILSFII------TSTTSFSYHPNIPTYTYFNSCASTLAAILYLPTLHNQITSS 155 (468)
Q Consensus 83 ~~-~~~~~~~~~~~l~~ll~~~~~~~~pD~vI~------~~~~~vA~~lgIP~i~~~~~~~~~~~~~~~~p~~~~~~~~~ 155 (468)
.. .....-......+.+++++ +||+||. .++...|..+|||.+.+-.
T Consensus 69 ~~~~~~~~~~~~~~a~~il~~~----kPd~vig~Ggyvs~P~~~Aa~~~~iPv~ihEq---------------------- 122 (357)
T COG0707 69 LLKAPFKLLKGVLQARKILKKL----KPDVVIGTGGYVSGPVGIAAKLLGIPVIIHEQ---------------------- 122 (357)
T ss_pred HHHHHHHHHHHHHHHHHHHHHc----CCCEEEecCCccccHHHHHHHhCCCCEEEEec----------------------
Confidence 11 1122333455667888888 9999999 3455567779999998644
Q ss_pred CCCCCCccccCCCCCCCCCCCCCccccCCCchhHHHHHHHhhhhcccceEEecChhhhhHHHHHHHHcCcccCCCCCCCe
Q 044031 156 FKDHPSSLLFIPGLPPVKSSFMPEPVLDRQKPIYDFFLNYSTSLSKSNGIIINTFDFLEQQAIKAIVNGDCVTNGTTPPL 235 (468)
Q Consensus 156 ~~~~~~~~~~~pg~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~s~~~le~~~~~~~~~~~~~~~~~~p~~ 235 (468)
..+||+. +....+....+..+|++.+... ...++
T Consensus 123 --------n~~~G~a-------------------------nk~~~~~a~~V~~~f~~~~~~~-------------~~~~~ 156 (357)
T COG0707 123 --------NAVPGLA-------------------------NKILSKFAKKVASAFPKLEAGV-------------KPENV 156 (357)
T ss_pred --------CCCcchh-------------------------HHHhHHhhceeeeccccccccC-------------CCCce
Confidence 2234432 1122222223444554422100 11358
Q ss_pred eEecccccCCcCCCCCCCCCCcchhHHhhcCCCCCceEEeccCCCcCCCHHH-HHHHHHHHHhCCCcEEEEEeCCCCccc
Q 044031 236 HCIGPLIVDAKDRAGGVSDDVSSDCLTWLDSQPSGSVVFLCFGSRGTFSAPQ-LKEIAIGLERSNQRFLWVVRNPSNAAE 314 (468)
Q Consensus 236 ~~VGpl~~~~~~~~~~~~~~~~~~l~~~l~~~~~~~~v~vs~GS~~~~~~~~-~~~~~~al~~~~~~~l~~~~~~~~~~~ 314 (468)
+.+|-.+..+... .+..-..+... ..+++|+|..||++....++ +.++...+.+ +..+++.+|.+.
T Consensus 157 ~~tG~Pvr~~~~~-------~~~~~~~~~~~-~~~~~ilV~GGS~Ga~~ln~~v~~~~~~l~~-~~~v~~~~G~~~---- 223 (357)
T COG0707 157 VVTGIPVRPEFEE-------LPAAEVRKDGR-LDKKTILVTGGSQGAKALNDLVPEALAKLAN-RIQVIHQTGKND---- 223 (357)
T ss_pred EEecCcccHHhhc-------cchhhhhhhcc-CCCcEEEEECCcchhHHHHHHHHHHHHHhhh-CeEEEEEcCcch----
Confidence 8888766554311 01111112111 14559999999998666554 3335555544 688999988750
Q ss_pred cCCChhHHhhccCCC-eEecCCCCHH-hhhCccCcceEEecCCcchHHHHHHhCCcEEecccc----cchhhHHHHHHhh
Q 044031 315 AELPEGFLERTKERG-LVVKSWAPQS-TILGHESVGGFVTHCGWSSVVEAVTYGVPMIAWPLY----AEQFLNSVALVQE 388 (468)
Q Consensus 315 ~~~~~~~~~~~~~~~-~~v~~~~pq~-~il~~~~~~~~ithgG~~s~~eal~~GvP~v~~P~~----~DQ~~na~~~~~~ 388 (468)
.+.........| +.+.+|..++ .+++.+++ +||++|++|+.|.+++|+|+|.+|+. .||..||+.++++
T Consensus 224 ---~~~~~~~~~~~~~~~v~~f~~dm~~~~~~ADL--vIsRaGa~Ti~E~~a~g~P~IliP~p~~~~~~Q~~NA~~l~~~ 298 (357)
T COG0707 224 ---LEELKSAYNELGVVRVLPFIDDMAALLAAADL--VISRAGALTIAELLALGVPAILVPYPPGADGHQEYNAKFLEKA 298 (357)
T ss_pred ---HHHHHHHHhhcCcEEEeeHHhhHHHHHHhccE--EEeCCcccHHHHHHHhCCCEEEeCCCCCccchHHHHHHHHHhC
Confidence 122333333344 6777888765 45656665 99999999999999999999999983 4899999999866
Q ss_pred cceeeeeccCCcccccCCCCccccHHHHHHHHHHHhcCch-hHHHHHHHHHHH
Q 044031 389 MKVAMPMFLNGEEETIGNGEGVVSAERVEERVRELMMGSE-GKALRERSLEMR 440 (468)
Q Consensus 389 ~g~g~~~~~~~~~~~~~~~~~~~~~~~l~~av~~~l~~~~-~~~~~~~a~~l~ 440 (468)
|+|..++. .+ +|.+++.+.|.+++.+++ .++|+++++.+.
T Consensus 299 -gaa~~i~~--------~~---lt~~~l~~~i~~l~~~~~~l~~m~~~a~~~~ 339 (357)
T COG0707 299 -GAALVIRQ--------SE---LTPEKLAELILRLLSNPEKLKAMAENAKKLG 339 (357)
T ss_pred -CCEEEecc--------cc---CCHHHHHHHHHHHhcCHHHHHHHHHHHHhcC
Confidence 99999984 56 999999999999999865 677777776654
No 30
>PF13528 Glyco_trans_1_3: Glycosyl transferase family 1
Probab=99.88 E-value=3.7e-21 Score=185.50 Aligned_cols=297 Identities=14% Similarity=0.203 Sum_probs=178.1
Q ss_pred eEEEecCC-CccCHHHHHHHHHHHHhCCCCcEEEEEeCCCCCCchhhhhhhhccccCCCCCeeEEEcCCCCCCCCCCChh
Q 044031 4 TIALYPGP-AFHHMISMVELGKLILQHRSDVSITILVPSMPLEESKTCSYINSISHRLNPIISFYYLPAIQMPSETLSRA 82 (468)
Q Consensus 4 ~Iv~~~~~-~~GHv~P~l~LA~~L~~~G~~h~Vt~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~i~~~~lp~~~~~~~ 82 (468)
||++...+ +.||+..+++||++| +| |+|+|++.....+ .+ .+.+....++............
T Consensus 2 kIl~~v~~~G~GH~~R~~~la~~L--rg--~~v~~~~~~~~~~--~~-----------~~~~~~~~~~~~~~~~~~~~~~ 64 (318)
T PF13528_consen 2 KILFYVQGHGLGHASRCLALARAL--RG--HEVTFITSGPAPE--FL-----------KPRFPVREIPGLGPIQENGRLD 64 (318)
T ss_pred EEEEEeCCCCcCHHHHHHHHHHHH--cc--CceEEEEcCCcHH--Hh-----------ccccCEEEccCceEeccCCccc
Confidence 48888877 999999999999999 69 9999998764321 11 1123444443332111111111
Q ss_pred H--HHHHH------HHHhhHHHHHHHHhhhcCCCccEEEe---cCcHHHhhhCCCCeEEEecchhHHHHHHHhhhhhhhc
Q 044031 83 D--IAIES------IKLNSSNVFQALENISLTSKILSFII---TSTTSFSYHPNIPTYTYFNSCASTLAAILYLPTLHNQ 151 (468)
Q Consensus 83 ~--~~~~~------~~~~~~~l~~ll~~~~~~~~pD~vI~---~~~~~vA~~lgIP~i~~~~~~~~~~~~~~~~p~~~~~ 151 (468)
. ..... .........+.+++ .+||+||+ +.+..+|+..|||++.+........
T Consensus 65 ~~~~~~~~~~~~~~~~~~~~~~~~~l~~----~~pDlVIsD~~~~~~~aa~~~giP~i~i~~~~~~~~------------ 128 (318)
T PF13528_consen 65 RWKTVRNNIRWLARLARRIRREIRWLRE----FRPDLVISDFYPLAALAARRAGIPVIVISNQYWFLH------------ 128 (318)
T ss_pred hHHHHHHHHHhhHHHHHHHHHHHHHHHh----cCCCEEEEcChHHHHHHHHhcCCCEEEEEehHHccc------------
Confidence 1 11111 11122223333333 49999999 5556688889999998766432210
Q ss_pred ccCCCCCCCCccccCCCCCCCCCCCCCccccCCCchhHHHHHHHhh--hhcccceEEecChhhhhHHHHHHHHcCcccCC
Q 044031 152 ITSSFKDHPSSLLFIPGLPPVKSSFMPEPVLDRQKPIYDFFLNYST--SLSKSNGIIINTFDFLEQQAIKAIVNGDCVTN 229 (468)
Q Consensus 152 ~~~~~~~~~~~~~~~pg~~~~~~~~l~~~~~~~~~~~~~~~~~~~~--~~~~~~~~l~~s~~~le~~~~~~~~~~~~~~~ 229 (468)
+... ++ ..........+... ........+..++. ...
T Consensus 129 ---------------~~~~------~~-----~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~-~~~-------------- 167 (318)
T PF13528_consen 129 ---------------PNFW------LP-----WDQDFGRLIERYIDRYHFPPADRRLALSFY-PPL-------------- 167 (318)
T ss_pred ---------------ccCC------cc-----hhhhHHHHHHHhhhhccCCcccceecCCcc-ccc--------------
Confidence 0000 00 00000011111111 12233333333333 110
Q ss_pred CCCCCeeEecccccCCcCCCCCCCCCCcchhHHhhcCCCCCceEEeccCCCcCCCHHHHHHHHHHHHhCC-CcEEEEEeC
Q 044031 230 GTTPPLHCIGPLIVDAKDRAGGVSDDVSSDCLTWLDSQPSGSVVFLCFGSRGTFSAPQLKEIAIGLERSN-QRFLWVVRN 308 (468)
Q Consensus 230 ~~~p~~~~VGpl~~~~~~~~~~~~~~~~~~l~~~l~~~~~~~~v~vs~GS~~~~~~~~~~~~~~al~~~~-~~~l~~~~~ 308 (468)
....++.++||+..+..... . ..+++.|+|+||..... .++++++..+ ..|++. +.
T Consensus 168 ~~~~~~~~~~p~~~~~~~~~-------~---------~~~~~~iLv~~gg~~~~------~~~~~l~~~~~~~~~v~-g~ 224 (318)
T PF13528_consen 168 PPFFRVPFVGPIIRPEIREL-------P---------PEDEPKILVYFGGGGPG------DLIEALKALPDYQFIVF-GP 224 (318)
T ss_pred cccccccccCchhccccccc-------C---------CCCCCEEEEEeCCCcHH------HHHHHHHhCCCCeEEEE-cC
Confidence 00135667888876543111 0 12334899999988632 5667777665 566655 54
Q ss_pred CCCccccCCChhHHhhccCCCeEecCCC--CHHhhhCccCcceEEecCCcchHHHHHHhCCcEEeccc--ccchhhHHHH
Q 044031 309 PSNAAEAELPEGFLERTKERGLVVKSWA--PQSTILGHESVGGFVTHCGWSSVVEAVTYGVPMIAWPL--YAEQFLNSVA 384 (468)
Q Consensus 309 ~~~~~~~~~~~~~~~~~~~~~~~v~~~~--pq~~il~~~~~~~~ithgG~~s~~eal~~GvP~v~~P~--~~DQ~~na~~ 384 (468)
.. .....+|+.+..+. ...++++.+++ +|||||+||++|++++|+|+|++|. ..+|..||+.
T Consensus 225 ~~------------~~~~~~ni~~~~~~~~~~~~~m~~ad~--vIs~~G~~t~~Ea~~~g~P~l~ip~~~~~EQ~~~a~~ 290 (318)
T PF13528_consen 225 NA------------ADPRPGNIHVRPFSTPDFAELMAAADL--VISKGGYTTISEALALGKPALVIPRPGQDEQEYNARK 290 (318)
T ss_pred Cc------------ccccCCCEEEeecChHHHHHHHHhCCE--EEECCCHHHHHHHHHcCCCEEEEeCCCCchHHHHHHH
Confidence 30 01125678887766 45568888887 9999999999999999999999999 6799999999
Q ss_pred HHhhcceeeeeccCCcccccCCCCccccHHHHHHHHHHH
Q 044031 385 LVQEMKVAMPMFLNGEEETIGNGEGVVSAERVEERVREL 423 (468)
Q Consensus 385 ~~~~~g~g~~~~~~~~~~~~~~~~~~~~~~~l~~av~~~ 423 (468)
+. ++|+|..++. ++ ++++.|+++|+++
T Consensus 291 l~-~~G~~~~~~~--------~~---~~~~~l~~~l~~~ 317 (318)
T PF13528_consen 291 LE-ELGLGIVLSQ--------ED---LTPERLAEFLERL 317 (318)
T ss_pred HH-HCCCeEEccc--------cc---CCHHHHHHHHhcC
Confidence 96 5699999974 56 9999999998764
No 31
>TIGR00661 MJ1255 conserved hypothetical protein. This model represents nearly the full length of MJ1255 from Methanococcus jannaschii and of an unpublished protein from Vibrio cholerae, as well as the C-terminal half of a protein from Methanobacterium thermoautotrophicum. A small region (~50 amino acids) within the domain appears related to a family of sugar transferases.
Probab=99.84 E-value=8.6e-19 Score=168.74 Aligned_cols=124 Identities=17% Similarity=0.235 Sum_probs=86.4
Q ss_pred CceEEeccCCCcCCCHHHHHHHHHHHHhCCCcEEEEEeCCCCccccCCChhHHhhccCCCeEecCCCC--HHhhhCccCc
Q 044031 270 GSVVFLCFGSRGTFSAPQLKEIAIGLERSNQRFLWVVRNPSNAAEAELPEGFLERTKERGLVVKSWAP--QSTILGHESV 347 (468)
Q Consensus 270 ~~~v~vs~GS~~~~~~~~~~~~~~al~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~p--q~~il~~~~~ 347 (468)
++.|+|.+||... ..++++|++.+. +.++++.. +...+. ...|+.+.+|.| ..+.++.+++
T Consensus 188 ~~~iLv~~g~~~~------~~l~~~l~~~~~-~~~i~~~~-----~~~~~~-----~~~~v~~~~~~~~~~~~~l~~ad~ 250 (321)
T TIGR00661 188 EDYILVYIGFEYR------YKILELLGKIAN-VKFVCYSY-----EVAKNS-----YNENVEIRRITTDNFKELIKNAEL 250 (321)
T ss_pred CCcEEEECCcCCH------HHHHHHHHhCCC-eEEEEeCC-----CCCccc-----cCCCEEEEECChHHHHHHHHhCCE
Confidence 3478888888642 345677766553 23333332 001111 134777778987 3455666666
Q ss_pred ceEEecCCcchHHHHHHhCCcEEeccccc--chhhHHHHHHhhcceeeeeccCCcccccCCCCccccHHHHHHHHHHHhc
Q 044031 348 GGFVTHCGWSSVVEAVTYGVPMIAWPLYA--EQFLNSVALVQEMKVAMPMFLNGEEETIGNGEGVVSAERVEERVRELMM 425 (468)
Q Consensus 348 ~~~ithgG~~s~~eal~~GvP~v~~P~~~--DQ~~na~~~~~~~g~g~~~~~~~~~~~~~~~~~~~~~~~l~~av~~~l~ 425 (468)
+|||||++|++|++++|+|+|++|..+ ||..||+.+++ .|+|+.++. .+ + ++.+++.++++
T Consensus 251 --vI~~~G~~t~~Ea~~~g~P~l~ip~~~~~eQ~~na~~l~~-~g~~~~l~~--------~~---~---~~~~~~~~~~~ 313 (321)
T TIGR00661 251 --VITHGGFSLISEALSLGKPLIVIPDLGQFEQGNNAVKLED-LGCGIALEY--------KE---L---RLLEAILDIRN 313 (321)
T ss_pred --EEECCChHHHHHHHHcCCCEEEEcCCCcccHHHHHHHHHH-CCCEEEcCh--------hh---H---HHHHHHHhccc
Confidence 999999999999999999999999965 89999999975 599999974 33 3 55666667777
Q ss_pred Cc
Q 044031 426 GS 427 (468)
Q Consensus 426 ~~ 427 (468)
|+
T Consensus 314 ~~ 315 (321)
T TIGR00661 314 MK 315 (321)
T ss_pred cc
Confidence 76
No 32
>PRK00726 murG undecaprenyldiphospho-muramoylpentapeptide beta-N- acetylglucosaminyltransferase; Provisional
Probab=99.80 E-value=4.2e-17 Score=159.87 Aligned_cols=317 Identities=16% Similarity=0.138 Sum_probs=181.8
Q ss_pred cceEEEecCCCccCHHHHHHHHHHHHhCCCCcEEEEEeCCCCCCchhhhhhhhccccCCCCCeeEEEcCCCCCCCCCCCh
Q 044031 2 KKTIALYPGPAFHHMISMVELGKLILQHRSDVSITILVPSMPLEESKTCSYINSISHRLNPIISFYYLPAIQMPSETLSR 81 (468)
Q Consensus 2 ~~~Iv~~~~~~~GHv~P~l~LA~~L~~~G~~h~Vt~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~i~~~~lp~~~~~~ 81 (468)
||+|+++..+..||...++.||+.|.++| |+|++++....... ... ...+++++.++...+... ..
T Consensus 1 ~~~i~i~~~g~gG~~~~~~~la~~L~~~g--~ev~vv~~~~~~~~-------~~~---~~~g~~~~~~~~~~~~~~--~~ 66 (357)
T PRK00726 1 MKKILLAGGGTGGHVFPALALAEELKKRG--WEVLYLGTARGMEA-------RLV---PKAGIEFHFIPSGGLRRK--GS 66 (357)
T ss_pred CcEEEEEcCcchHhhhHHHHHHHHHHhCC--CEEEEEECCCchhh-------hcc---ccCCCcEEEEeccCcCCC--Ch
Confidence 16799999999999999999999999999 99999976432110 000 113666666654322111 11
Q ss_pred hHHHHHH--HHHhhHHHHHHHHhhhcCCCccEEEe-cC-----cHHHhhhCCCCeEEEecchhHHHHHHHhhhhhhhccc
Q 044031 82 ADIAIES--IKLNSSNVFQALENISLTSKILSFII-TS-----TTSFSYHPNIPTYTYFNSCASTLAAILYLPTLHNQIT 153 (468)
Q Consensus 82 ~~~~~~~--~~~~~~~l~~ll~~~~~~~~pD~vI~-~~-----~~~vA~~lgIP~i~~~~~~~~~~~~~~~~p~~~~~~~ 153 (468)
...+... .-.....+.+++++. +||+|++ .+ +..++...++|.+.....
T Consensus 67 ~~~l~~~~~~~~~~~~~~~~ik~~----~pDvv~~~~~~~~~~~~~~~~~~~~p~v~~~~~------------------- 123 (357)
T PRK00726 67 LANLKAPFKLLKGVLQARKILKRF----KPDVVVGFGGYVSGPGGLAARLLGIPLVIHEQN------------------- 123 (357)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHhc----CCCEEEECCCcchhHHHHHHHHcCCCEEEEcCC-------------------
Confidence 1111111 122233444555555 9999999 21 223455578998753110
Q ss_pred CCCCCCCCccccCCCCCCCCCCCCCccccCCCchhHHHHHHHhhhhcccceEEecChhhhhHHHHHHHHcCcccCCCCCC
Q 044031 154 SSFKDHPSSLLFIPGLPPVKSSFMPEPVLDRQKPIYDFFLNYSTSLSKSNGIIINTFDFLEQQAIKAIVNGDCVTNGTTP 233 (468)
Q Consensus 154 ~~~~~~~~~~~~~pg~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~s~~~le~~~~~~~~~~~~~~~~~~p 233 (468)
..++ ..+.+ ....++.++..+ ++. ... . +..
T Consensus 124 -----------~~~~-------------------~~~r~-----~~~~~d~ii~~~-~~~---~~~---~-------~~~ 154 (357)
T PRK00726 124 -----------AVPG-------------------LANKL-----LARFAKKVATAF-PGA---FPE---F-------FKP 154 (357)
T ss_pred -----------CCcc-------------------HHHHH-----HHHHhchheECc-hhh---hhc---c-------CCC
Confidence 0000 00000 011223333222 211 000 0 126
Q ss_pred CeeEecccccCCcCCCCCCCCCCcchhHHhhcCCCCCceEEeccCCCcCCCHHHHHH-HHHHHHhCCC--cEEEEEeCCC
Q 044031 234 PLHCIGPLIVDAKDRAGGVSDDVSSDCLTWLDSQPSGSVVFLCFGSRGTFSAPQLKE-IAIGLERSNQ--RFLWVVRNPS 310 (468)
Q Consensus 234 ~~~~VGpl~~~~~~~~~~~~~~~~~~l~~~l~~~~~~~~v~vs~GS~~~~~~~~~~~-~~~al~~~~~--~~l~~~~~~~ 310 (468)
+++++|+.+....... .. ..+-+...+...+|++..|+.. .+.+.. +.++++.... .++|.+|...
T Consensus 155 ~i~vi~n~v~~~~~~~------~~--~~~~~~~~~~~~~i~~~gg~~~---~~~~~~~l~~a~~~~~~~~~~~~~~G~g~ 223 (357)
T PRK00726 155 KAVVTGNPVREEILAL------AA--PPARLAGREGKPTLLVVGGSQG---ARVLNEAVPEALALLPEALQVIHQTGKGD 223 (357)
T ss_pred CEEEECCCCChHhhcc------cc--hhhhccCCCCCeEEEEECCcHh---HHHHHHHHHHHHHHhhhCcEEEEEcCCCc
Confidence 7889987765432111 01 0111122223336777666653 222222 3355544332 4566667641
Q ss_pred CccccCCChhHHhhcc-CCCeEecCCCC-HHhhhCccCcceEEecCCcchHHHHHHhCCcEEeccc----ccchhhHHHH
Q 044031 311 NAAEAELPEGFLERTK-ERGLVVKSWAP-QSTILGHESVGGFVTHCGWSSVVEAVTYGVPMIAWPL----YAEQFLNSVA 384 (468)
Q Consensus 311 ~~~~~~~~~~~~~~~~-~~~~~v~~~~p-q~~il~~~~~~~~ithgG~~s~~eal~~GvP~v~~P~----~~DQ~~na~~ 384 (468)
. +.+.+... +-++.+.+|+. ..++++.+++ +|+|+|.++++||+++|+|+|++|. .+||..|+..
T Consensus 224 ---~----~~~~~~~~~~~~v~~~g~~~~~~~~~~~~d~--~i~~~g~~~~~Ea~~~g~Pvv~~~~~~~~~~~~~~~~~~ 294 (357)
T PRK00726 224 ---L----EEVRAAYAAGINAEVVPFIDDMAAAYAAADL--VICRAGASTVAELAAAGLPAILVPLPHAADDHQTANARA 294 (357)
T ss_pred ---H----HHHHHHhhcCCcEEEeehHhhHHHHHHhCCE--EEECCCHHHHHHHHHhCCCEEEecCCCCCcCcHHHHHHH
Confidence 1 22222221 11267778884 5688988888 9999999999999999999999997 3689999999
Q ss_pred HHhhcceeeeeccCCcccccCCCCccccHHHHHHHHHHHhcCch-hHHHHHHH
Q 044031 385 LVQEMKVAMPMFLNGEEETIGNGEGVVSAERVEERVRELMMGSE-GKALRERS 436 (468)
Q Consensus 385 ~~~~~g~g~~~~~~~~~~~~~~~~~~~~~~~l~~av~~~l~~~~-~~~~~~~a 436 (468)
+.+. |.|..+.. ++ ++.+.+.+++.++++|++ .++|++++
T Consensus 295 i~~~-~~g~~~~~--------~~---~~~~~l~~~i~~ll~~~~~~~~~~~~~ 335 (357)
T PRK00726 295 LVDA-GAALLIPQ--------SD---LTPEKLAEKLLELLSDPERLEAMAEAA 335 (357)
T ss_pred HHHC-CCEEEEEc--------cc---CCHHHHHHHHHHHHcCHHHHHHHHHHH
Confidence 9765 99999974 45 789999999999999984 33344443
No 33
>cd03785 GT1_MurG MurG is an N-acetylglucosaminyltransferase, the last enzyme involved in the intracellular phase of peptidoglycan biosynthesis. It transfers N-acetyl-D-glucosamine (GlcNAc) from UDP-GlcNAc to the C4 hydroxyl of a lipid-linked N-acetylmuramoyl pentapeptide (NAM). The resulting disaccharide is then transported across the cell membrane, where it is polymerized into NAG-NAM cell-wall repeat structure. MurG belongs to the GT-B structural superfamily of glycoslytransferases, which have characteristic N- and C-terminal domains, each containing a typical Rossmann fold. The two domains have high structural homology despite minimal sequence homology. The large cleft that separates the two domains includes the catalytic center and permits a high degree of flexibility.
Probab=99.79 E-value=4.3e-17 Score=159.39 Aligned_cols=323 Identities=16% Similarity=0.149 Sum_probs=188.2
Q ss_pred eEEEecCCCccCHHHHHHHHHHHHhCCCCcEEEEEeCCCCCCchhhhhhhhccccCCCCCeeEEEcCCCCCCCCCCChhH
Q 044031 4 TIALYPGPAFHHMISMVELGKLILQHRSDVSITILVPSMPLEESKTCSYINSISHRLNPIISFYYLPAIQMPSETLSRAD 83 (468)
Q Consensus 4 ~Iv~~~~~~~GHv~P~l~LA~~L~~~G~~h~Vt~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~i~~~~lp~~~~~~~~ 83 (468)
+|++...++.||+...+.||+.|.++| |+|++++........ .. ...++++..++....+.. .....
T Consensus 1 ~~~~~~~~~gG~~~~~~~la~~l~~~G--~ev~v~~~~~~~~~~----~~------~~~~~~~~~~~~~~~~~~-~~~~~ 67 (350)
T cd03785 1 RILIAGGGTGGHIFPALALAEELRERG--AEVLFLGTKRGLEAR----LV------PKAGIPLHTIPVGGLRRK-GSLKK 67 (350)
T ss_pred CEEEEecCchhhhhHHHHHHHHHHhCC--CEEEEEECCCcchhh----cc------cccCCceEEEEecCcCCC-ChHHH
Confidence 589999999999999999999999999 999999764322110 00 112566666664422111 11111
Q ss_pred HHHHH--HHHhhHHHHHHHHhhhcCCCccEEEe-c-----CcHHHhhhCCCCeEEEecchhHHHHHHHhhhhhhhcccCC
Q 044031 84 IAIES--IKLNSSNVFQALENISLTSKILSFII-T-----STTSFSYHPNIPTYTYFNSCASTLAAILYLPTLHNQITSS 155 (468)
Q Consensus 84 ~~~~~--~~~~~~~l~~ll~~~~~~~~pD~vI~-~-----~~~~vA~~lgIP~i~~~~~~~~~~~~~~~~p~~~~~~~~~ 155 (468)
+... +......+.+++++. +||+|++ . ++..+|...|+|++.+...
T Consensus 68 -~~~~~~~~~~~~~~~~~i~~~----~pDvI~~~~~~~~~~~~~~a~~~~~p~v~~~~~--------------------- 121 (350)
T cd03785 68 -LKAPFKLLKGVLQARKILKKF----KPDVVVGFGGYVSGPVGLAAKLLGIPLVIHEQN--------------------- 121 (350)
T ss_pred -HHHHHHHHHHHHHHHHHHHhc----CCCEEEECCCCcchHHHHHHHHhCCCEEEEcCC---------------------
Confidence 1111 112223445555555 9999998 1 1234566789998753110
Q ss_pred CCCCCCccccCCCCCCCCCCCCCccccCCCchhHHHHHHHhhhhcccceEEecChhhhhHHHHHHHHcCcccCCCCCCCe
Q 044031 156 FKDHPSSLLFIPGLPPVKSSFMPEPVLDRQKPIYDFFLNYSTSLSKSNGIIINTFDFLEQQAIKAIVNGDCVTNGTTPPL 235 (468)
Q Consensus 156 ~~~~~~~~~~~pg~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~s~~~le~~~~~~~~~~~~~~~~~~p~~ 235 (468)
..++. .+. .....++.++..+-...+. . + ..++
T Consensus 122 ---------~~~~~-------------------~~~-----~~~~~~~~vi~~s~~~~~~-----~------~---~~~~ 154 (350)
T cd03785 122 ---------AVPGL-------------------ANR-----LLARFADRVALSFPETAKY-----F------P---KDKA 154 (350)
T ss_pred ---------CCccH-------------------HHH-----HHHHhhCEEEEcchhhhhc-----C------C---CCcE
Confidence 00000 000 0112244555443322221 0 0 1567
Q ss_pred eEecccccCCcCCCCCCCCCCcchhHHhhcCCCCCceEEeccCCCcCCCH-HHHHHHHHHHHhCCCcEEEEEeCCCCccc
Q 044031 236 HCIGPLIVDAKDRAGGVSDDVSSDCLTWLDSQPSGSVVFLCFGSRGTFSA-PQLKEIAIGLERSNQRFLWVVRNPSNAAE 314 (468)
Q Consensus 236 ~~VGpl~~~~~~~~~~~~~~~~~~l~~~l~~~~~~~~v~vs~GS~~~~~~-~~~~~~~~al~~~~~~~l~~~~~~~~~~~ 314 (468)
..+|..+....... .+ . .+.+...+++.+|++..|+...... +.+.+++..+...+..+++.+|.. ..
T Consensus 155 ~~i~n~v~~~~~~~------~~-~-~~~~~~~~~~~~i~~~~g~~~~~~~~~~l~~a~~~l~~~~~~~~~i~G~g---~~ 223 (350)
T cd03785 155 VVTGNPVREEILAL------DR-E-RARLGLRPGKPTLLVFGGSQGARAINEAVPEALAELLRKRLQVIHQTGKG---DL 223 (350)
T ss_pred EEECCCCchHHhhh------hh-h-HHhcCCCCCCeEEEEECCcHhHHHHHHHHHHHHHHhhccCeEEEEEcCCc---cH
Confidence 78887654322001 11 1 2222222334466666666643221 223344455544455667777654 11
Q ss_pred cCCChhHHhhccCCCeEecCCC-CHHhhhCccCcceEEecCCcchHHHHHHhCCcEEeccc----ccchhhHHHHHHhhc
Q 044031 315 AELPEGFLERTKERGLVVKSWA-PQSTILGHESVGGFVTHCGWSSVVEAVTYGVPMIAWPL----YAEQFLNSVALVQEM 389 (468)
Q Consensus 315 ~~~~~~~~~~~~~~~~~v~~~~-pq~~il~~~~~~~~ithgG~~s~~eal~~GvP~v~~P~----~~DQ~~na~~~~~~~ 389 (468)
+.+.+...+ . ..++.+.+|. ....+|+.+++ +|+++|.+++.||+++|+|+|+.|. ..+|..|+..+.+.
T Consensus 224 ~~l~~~~~~-~-~~~v~~~g~~~~~~~~l~~ad~--~v~~sg~~t~~Eam~~G~Pvv~~~~~~~~~~~~~~~~~~l~~~- 298 (350)
T cd03785 224 EEVKKAYEE-L-GVNYEVFPFIDDMAAAYAAADL--VISRAGASTVAELAALGLPAILIPLPYAADDHQTANARALVKA- 298 (350)
T ss_pred HHHHHHHhc-c-CCCeEEeehhhhHHHHHHhcCE--EEECCCHhHHHHHHHhCCCEEEeecCCCCCCcHHHhHHHHHhC-
Confidence 111111111 1 3578888887 45678888887 9999999999999999999999986 35799999999765
Q ss_pred ceeeeeccCCcccccCCCCccccHHHHHHHHHHHhcCch-hHHHHHHHHHH
Q 044031 390 KVAMPMFLNGEEETIGNGEGVVSAERVEERVRELMMGSE-GKALRERSLEM 439 (468)
Q Consensus 390 g~g~~~~~~~~~~~~~~~~~~~~~~~l~~av~~~l~~~~-~~~~~~~a~~l 439 (468)
|.|+.+.. .+ .+.+++.++++++++|++ .+.|++++++.
T Consensus 299 g~g~~v~~--------~~---~~~~~l~~~i~~ll~~~~~~~~~~~~~~~~ 338 (350)
T cd03785 299 GAAVLIPQ--------EE---LTPERLAAALLELLSDPERLKAMAEAARSL 338 (350)
T ss_pred CCEEEEec--------CC---CCHHHHHHHHHHHhcCHHHHHHHHHHHHhc
Confidence 99999874 33 589999999999998874 45555555443
No 34
>TIGR01133 murG undecaprenyldiphospho-muramoylpentapeptide beta-N-acetylglucosaminyltransferase. RL J Bacteriol 1993 Mar;175(6):1841-3
Probab=99.73 E-value=2.8e-15 Score=146.41 Aligned_cols=88 Identities=19% Similarity=0.301 Sum_probs=71.1
Q ss_pred CHHhhhCccCcceEEecCCcchHHHHHHhCCcEEecccc---cchhhHHHHHHhhcceeeeeccCCcccccCCCCccccH
Q 044031 337 PQSTILGHESVGGFVTHCGWSSVVEAVTYGVPMIAWPLY---AEQFLNSVALVQEMKVAMPMFLNGEEETIGNGEGVVSA 413 (468)
Q Consensus 337 pq~~il~~~~~~~~ithgG~~s~~eal~~GvP~v~~P~~---~DQ~~na~~~~~~~g~g~~~~~~~~~~~~~~~~~~~~~ 413 (468)
+-..+++.+++ +|+++|.+++.||+++|+|+|+.|.. .+|..|+..+.+ .+.|..+.. .+ .+.
T Consensus 243 ~~~~~l~~ad~--~v~~~g~~~l~Ea~~~g~Pvv~~~~~~~~~~~~~~~~~i~~-~~~G~~~~~--------~~---~~~ 308 (348)
T TIGR01133 243 NMAAAYAAADL--VISRAGASTVAELAAAGVPAILIPYPYAADDQYYNAKFLED-LGAGLVIRQ--------KE---LLP 308 (348)
T ss_pred CHHHHHHhCCE--EEECCChhHHHHHHHcCCCEEEeeCCCCccchhhHHHHHHH-CCCEEEEec--------cc---CCH
Confidence 45678888888 99999988999999999999999873 478889988875 499988874 34 679
Q ss_pred HHHHHHHHHHhcCch-hHHHHHHHHH
Q 044031 414 ERVEERVRELMMGSE-GKALRERSLE 438 (468)
Q Consensus 414 ~~l~~av~~~l~~~~-~~~~~~~a~~ 438 (468)
+++.++++++++|++ .++|.+++++
T Consensus 309 ~~l~~~i~~ll~~~~~~~~~~~~~~~ 334 (348)
T TIGR01133 309 EKLLEALLKLLLDPANLEAMAEAARK 334 (348)
T ss_pred HHHHHHHHHHHcCHHHHHHHHHHHHh
Confidence 999999999999884 3445555543
No 35
>TIGR00215 lpxB lipid-A-disaccharide synthase. Lipid-A precursor biosynthesis producing lipid A disaccharide in a condensation reaction. transcribed as part of an operon including lpxA
Probab=99.71 E-value=5.9e-16 Score=152.29 Aligned_cols=347 Identities=14% Similarity=0.090 Sum_probs=189.9
Q ss_pred ceEEEecCCCccCHHHHHHHHHHHHhCCCCcEEEEEeCCCCCCchhhhhhhhccccCCCCCeeEEEcCCCCCCCCCCChh
Q 044031 3 KTIALYPGPAFHHMISMVELGKLILQHRSDVSITILVPSMPLEESKTCSYINSISHRLNPIISFYYLPAIQMPSETLSRA 82 (468)
Q Consensus 3 ~~Iv~~~~~~~GHv~P~l~LA~~L~~~G~~h~Vt~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~i~~~~lp~~~~~~~ 82 (468)
++|++...++.||++|. +|+++|+++| ++|+|++..... ..+. . ....+++..++...+.+ ...
T Consensus 6 ~ki~i~aGgtsGhi~pa-al~~~l~~~~--~~~~~~g~gg~~----m~~~--g----~~~~~~~~~l~v~G~~~---~l~ 69 (385)
T TIGR00215 6 PTIALVAGEASGDILGA-GLRQQLKEHY--PNARFIGVAGPR----MAAE--G----CEVLYSMEELSVMGLRE---VLG 69 (385)
T ss_pred CeEEEEeCCccHHHHHH-HHHHHHHhcC--CCcEEEEEccHH----HHhC--c----CccccChHHhhhccHHH---HHH
Confidence 68999999999999999 9999999999 888888654221 0000 0 11123333333221110 000
Q ss_pred HHHHHHHHHhhHHHHHHHHhhhcCCCccEEEe--cCcH---H--HhhhCCCCeEEEecchhHHHHHHHhhhhhhhcccCC
Q 044031 83 DIAIESIKLNSSNVFQALENISLTSKILSFII--TSTT---S--FSYHPNIPTYTYFNSCASTLAAILYLPTLHNQITSS 155 (468)
Q Consensus 83 ~~~~~~~~~~~~~l~~ll~~~~~~~~pD~vI~--~~~~---~--vA~~lgIP~i~~~~~~~~~~~~~~~~p~~~~~~~~~ 155 (468)
....+........+++++. +||+||. +++. . .|+.+|||++.+.+ |-. +
T Consensus 70 --~~~~~~~~~~~~~~~l~~~----kPd~vi~~g~~~~~~~~a~aa~~~gip~v~~i~-P~~-----------w------ 125 (385)
T TIGR00215 70 --RLGRLLKIRKEVVQLAKQA----KPDLLVGIDAPDFNLTKELKKKDPGIKIIYYIS-PQV-----------W------ 125 (385)
T ss_pred --HHHHHHHHHHHHHHHHHhc----CCCEEEEeCCCCccHHHHHHHhhCCCCEEEEeC-CcH-----------h------
Confidence 1111222333555556665 9999999 2221 2 66779999886532 100 0
Q ss_pred CCCCCCccccCCCCCCCCCCCCCccccCCCchhHHHHHHHhhhhcccceEEecChhhhhHHHHHHHHcCcccCCCCCCCe
Q 044031 156 FKDHPSSLLFIPGLPPVKSSFMPEPVLDRQKPIYDFFLNYSTSLSKSNGIIINTFDFLEQQAIKAIVNGDCVTNGTTPPL 235 (468)
Q Consensus 156 ~~~~~~~~~~~pg~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~s~~~le~~~~~~~~~~~~~~~~~~p~~ 235 (468)
.+++. ++ +.+.+ ..+. ++.+++. +... +.... .+.
T Consensus 126 ---------aw~~~--------------~~----r~l~~------~~d~-v~~~~~~-e~~~---~~~~g-------~~~ 160 (385)
T TIGR00215 126 ---------AWRKW--------------RA----KKIEK------ATDF-LLAILPF-EKAF---YQKKN-------VPC 160 (385)
T ss_pred ---------hcCcc--------------hH----HHHHH------HHhH-hhccCCC-cHHH---HHhcC-------CCE
Confidence 00000 00 00000 1111 2223322 2222 11110 356
Q ss_pred eEecccccCCcCCCCCCCCCCcchhHHhhcCCCCCceEEeccCCCcCCCHHHHHHHHHHHHh---C--CCcEEEEEeCCC
Q 044031 236 HCIGPLIVDAKDRAGGVSDDVSSDCLTWLDSQPSGSVVFLCFGSRGTFSAPQLKEIAIGLER---S--NQRFLWVVRNPS 310 (468)
Q Consensus 236 ~~VGpl~~~~~~~~~~~~~~~~~~l~~~l~~~~~~~~v~vs~GS~~~~~~~~~~~~~~al~~---~--~~~~l~~~~~~~ 310 (468)
.+||....+......+ ...+..+-+.-.+++++|.+..||....-......++++++. . +.++++......
T Consensus 161 ~~vGnPv~~~~~~~~~----~~~~~r~~lgl~~~~~~Ilvl~GSR~aei~k~~~~ll~a~~~l~~~~p~~~~vi~~~~~~ 236 (385)
T TIGR00215 161 RFVGHPLLDAIPLYKP----DRKSAREKLGIDHNGETLALLPGSRGSEVEKLFPLFLKAAQLLEQQEPDLRRVLPVVNFK 236 (385)
T ss_pred EEECCchhhhccccCC----CHHHHHHHcCCCCCCCEEEEECCCCHHHHHHhHHHHHHHHHHHHHhCCCeEEEEEeCCch
Confidence 6799766443211000 122222223333345588888899864322233345444432 2 345655544321
Q ss_pred CccccCCChhHHhhcc-CCCeEecCCCCHHhhhCccCcceEEecCCcchHHHHHHhCCcEEec----cccc---------
Q 044031 311 NAAEAELPEGFLERTK-ERGLVVKSWAPQSTILGHESVGGFVTHCGWSSVVEAVTYGVPMIAW----PLYA--------- 376 (468)
Q Consensus 311 ~~~~~~~~~~~~~~~~-~~~~~v~~~~pq~~il~~~~~~~~ithgG~~s~~eal~~GvP~v~~----P~~~--------- 376 (468)
. ...+ +.+..... ...+.+..+ ....+++.+++ +|+.+|..|+ |++++|+|+|++ |+..
T Consensus 237 ~--~~~~-~~~~~~~~~~~~v~~~~~-~~~~~l~aADl--~V~~SGt~tl-Ea~a~G~P~Vv~yk~~pl~~~~~~~~~~~ 309 (385)
T TIGR00215 237 R--RLQF-EQIKAEYGPDLQLHLIDG-DARKAMFAADA--ALLASGTAAL-EAALIKTPMVVGYRMKPLTFLIARRLVKT 309 (385)
T ss_pred h--HHHH-HHHHHHhCCCCcEEEECc-hHHHHHHhCCE--EeecCCHHHH-HHHHcCCCEEEEEcCCHHHHHHHHHHHcC
Confidence 0 0000 11111111 112322222 33457777777 9999999888 999999999999 8742
Q ss_pred chhhHHHHHHhhcceeeeeccCCcccccCCCCccccHHHHHHHHHHHhcCc----h-hHHHHHHHHHHHHHHHHhhcCCC
Q 044031 377 EQFLNSVALVQEMKVAMPMFLNGEEETIGNGEGVVSAERVEERVRELMMGS----E-GKALRERSLEMRMMAATAWNNND 451 (468)
Q Consensus 377 DQ~~na~~~~~~~g~g~~~~~~~~~~~~~~~~~~~~~~~l~~av~~~l~~~----~-~~~~~~~a~~l~~~~~~a~~~~~ 451 (468)
+|..|+..++++ ++...+.. ++ +|++.|.+.+.++|+|+ + .+++++...++++.+ . +
T Consensus 310 ~~~~~~nil~~~-~~~pel~q--------~~---~~~~~l~~~~~~ll~~~~~~~~~~~~~~~~~~~~~~~l----~--~ 371 (385)
T TIGR00215 310 DYISLPNILANR-LLVPELLQ--------EE---CTPHPLAIALLLLLENGLKAYKEMHRERQFFEELRQRI----Y--C 371 (385)
T ss_pred CeeeccHHhcCC-ccchhhcC--------CC---CCHHHHHHHHHHHhcCCcccHHHHHHHHHHHHHHHHHh----c--C
Confidence 277899999865 88888763 56 99999999999999998 6 667777777776655 3 5
Q ss_pred CCChHHHHHHHH
Q 044031 452 GGSSFTAFSNLF 463 (468)
Q Consensus 452 ~g~~~~~~~~~~ 463 (468)
+|.+.+..+..+
T Consensus 372 ~~~~~~~a~~i~ 383 (385)
T TIGR00215 372 NADSERAAQAVL 383 (385)
T ss_pred CCHHHHHHHHHh
Confidence 666666555443
No 36
>PRK13609 diacylglycerol glucosyltransferase; Provisional
Probab=99.65 E-value=1.3e-14 Score=143.47 Aligned_cols=145 Identities=17% Similarity=0.267 Sum_probs=100.9
Q ss_pred CCceEEeccCCCcCCCHHHHHHHHHHHHh-CCCcEEEEEeCCCCccccCCChhHHhhc--cCCCeEecCCCCHH-hhhCc
Q 044031 269 SGSVVFLCFGSRGTFSAPQLKEIAIGLER-SNQRFLWVVRNPSNAAEAELPEGFLERT--KERGLVVKSWAPQS-TILGH 344 (468)
Q Consensus 269 ~~~~v~vs~GS~~~~~~~~~~~~~~al~~-~~~~~l~~~~~~~~~~~~~~~~~~~~~~--~~~~~~v~~~~pq~-~il~~ 344 (468)
++++|++..|+.+.. +.+..+++++.. .+.+++++.|.+ ..+-+.+.+.. ...++.+.+|+++. +++..
T Consensus 201 ~~~~il~~~G~~~~~--k~~~~li~~l~~~~~~~~viv~G~~-----~~~~~~l~~~~~~~~~~v~~~g~~~~~~~l~~~ 273 (380)
T PRK13609 201 NKKILLIMAGAHGVL--GNVKELCQSLMSVPDLQVVVVCGKN-----EALKQSLEDLQETNPDALKVFGYVENIDELFRV 273 (380)
T ss_pred CCcEEEEEcCCCCCC--cCHHHHHHHHhhCCCcEEEEEeCCC-----HHHHHHHHHHHhcCCCcEEEEechhhHHHHHHh
Confidence 445788877887632 234567777754 356777777643 00111222111 12478888999874 78888
Q ss_pred cCcceEEecCCcchHHHHHHhCCcEEec-ccccchhhHHHHHHhhcceeeeeccCCcccccCCCCccccHHHHHHHHHHH
Q 044031 345 ESVGGFVTHCGWSSVVEAVTYGVPMIAW-PLYAEQFLNSVALVQEMKVAMPMFLNGEEETIGNGEGVVSAERVEERVREL 423 (468)
Q Consensus 345 ~~~~~~ithgG~~s~~eal~~GvP~v~~-P~~~DQ~~na~~~~~~~g~g~~~~~~~~~~~~~~~~~~~~~~~l~~av~~~ 423 (468)
+++ +|+..|..|+.||+++|+|+|+. |..+.|..|+..+.+. |+|+... +.+++.++|.++
T Consensus 274 aD~--~v~~~gg~t~~EA~a~g~PvI~~~~~~g~~~~n~~~~~~~-G~~~~~~---------------~~~~l~~~i~~l 335 (380)
T PRK13609 274 TSC--MITKPGGITLSEAAALGVPVILYKPVPGQEKENAMYFERK-GAAVVIR---------------DDEEVFAKTEAL 335 (380)
T ss_pred ccE--EEeCCCchHHHHHHHhCCCEEECCCCCCcchHHHHHHHhC-CcEEEEC---------------CHHHHHHHHHHH
Confidence 887 99999988999999999999985 6777788899888654 8887543 567999999999
Q ss_pred hcCch-hHHHHHHHHH
Q 044031 424 MMGSE-GKALRERSLE 438 (468)
Q Consensus 424 l~~~~-~~~~~~~a~~ 438 (468)
++|++ .++|++++++
T Consensus 336 l~~~~~~~~m~~~~~~ 351 (380)
T PRK13609 336 LQDDMKLLQMKEAMKS 351 (380)
T ss_pred HCCHHHHHHHHHHHHH
Confidence 99884 4455555443
No 37
>PRK00025 lpxB lipid-A-disaccharide synthase; Reviewed
Probab=99.61 E-value=5.7e-14 Score=138.94 Aligned_cols=153 Identities=17% Similarity=0.178 Sum_probs=85.2
Q ss_pred CCceEEeccCCCcCCCHHHHHHHHHHHH---h--CCCcEEEEEeCCCCccccCCChhHHhhccC---CCeEecCCCCHHh
Q 044031 269 SGSVVFLCFGSRGTFSAPQLKEIAIGLE---R--SNQRFLWVVRNPSNAAEAELPEGFLERTKE---RGLVVKSWAPQST 340 (468)
Q Consensus 269 ~~~~v~vs~GS~~~~~~~~~~~~~~al~---~--~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~---~~~~v~~~~pq~~ 340 (468)
++++|++..||...........++++++ + .+.+++|+.+.+. .-+.+.+.... -++.+.+ -.-..
T Consensus 185 ~~~~il~~~gsr~~~~~~~~~~l~~a~~~l~~~~~~~~~ii~~~~~~------~~~~~~~~~~~~~~~~v~~~~-~~~~~ 257 (380)
T PRK00025 185 DARVLALLPGSRGQEIKRLLPPFLKAAQLLQQRYPDLRFVLPLVNPK------RREQIEEALAEYAGLEVTLLD-GQKRE 257 (380)
T ss_pred CCCEEEEECCCCHHHHHHHHHHHHHHHHHHHHhCCCeEEEEecCChh------hHHHHHHHHhhcCCCCeEEEc-ccHHH
Confidence 3446677777765331122333444433 2 2456777765320 00112221111 1233322 12346
Q ss_pred hhCccCcceEEecCCcchHHHHHHhCCcEEeccccc--------chhhH-----HHHHHhhcceeeeeccCCcccccCCC
Q 044031 341 ILGHESVGGFVTHCGWSSVVEAVTYGVPMIAWPLYA--------EQFLN-----SVALVQEMKVAMPMFLNGEEETIGNG 407 (468)
Q Consensus 341 il~~~~~~~~ithgG~~s~~eal~~GvP~v~~P~~~--------DQ~~n-----a~~~~~~~g~g~~~~~~~~~~~~~~~ 407 (468)
+++.+++ +|+.+|.+++ |++++|+|+|+.|... +|..| +..+++. +++..+.. .+
T Consensus 258 ~~~~aDl--~v~~sG~~~l-Ea~a~G~PvI~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~-~~~~~~~~--------~~ 325 (380)
T PRK00025 258 AMAAADA--ALAASGTVTL-ELALLKVPMVVGYKVSPLTFWIAKRLVKVPYVSLPNLLAGR-ELVPELLQ--------EE 325 (380)
T ss_pred HHHhCCE--EEECccHHHH-HHHHhCCCEEEEEccCHHHHHHHHHHHcCCeeehHHHhcCC-CcchhhcC--------CC
Confidence 7777887 9999998887 9999999999995432 23222 2223211 22333321 23
Q ss_pred CccccHHHHHHHHHHHhcCch-hHHHHHHHHHHHHHH
Q 044031 408 EGVVSAERVEERVRELMMGSE-GKALRERSLEMRMMA 443 (468)
Q Consensus 408 ~~~~~~~~l~~av~~~l~~~~-~~~~~~~a~~l~~~~ 443 (468)
.+++.+.+++.++++|++ .++|+++++++.+.+
T Consensus 326 ---~~~~~l~~~i~~ll~~~~~~~~~~~~~~~~~~~~ 359 (380)
T PRK00025 326 ---ATPEKLARALLPLLADGARRQALLEGFTELHQQL 359 (380)
T ss_pred ---CCHHHHHHHHHHHhcCHHHHHHHHHHHHHHHHHh
Confidence 789999999999999986 566667766555543
No 38
>PRK13608 diacylglycerol glucosyltransferase; Provisional
Probab=99.56 E-value=3.1e-12 Score=126.63 Aligned_cols=147 Identities=12% Similarity=0.221 Sum_probs=102.8
Q ss_pred CCceEEeccCCCcCCCHHHHHHHHHHH-Hh-CCCcEEEEEeCCCCccccCCChhHHhhc-cCCCeEecCCCCHH-hhhCc
Q 044031 269 SGSVVFLCFGSRGTFSAPQLKEIAIGL-ER-SNQRFLWVVRNPSNAAEAELPEGFLERT-KERGLVVKSWAPQS-TILGH 344 (468)
Q Consensus 269 ~~~~v~vs~GS~~~~~~~~~~~~~~al-~~-~~~~~l~~~~~~~~~~~~~~~~~~~~~~-~~~~~~v~~~~pq~-~il~~ 344 (468)
++++|++..|+++.. ..+..+++++ +. .+.++++++|.+ ..+-+.+.+.. ...++.+.+|.++. +++..
T Consensus 201 ~~~~ilv~~G~lg~~--k~~~~li~~~~~~~~~~~~vvv~G~~-----~~l~~~l~~~~~~~~~v~~~G~~~~~~~~~~~ 273 (391)
T PRK13608 201 DKQTILMSAGAFGVS--KGFDTMITDILAKSANAQVVMICGKS-----KELKRSLTAKFKSNENVLILGYTKHMNEWMAS 273 (391)
T ss_pred CCCEEEEECCCcccc--hhHHHHHHHHHhcCCCceEEEEcCCC-----HHHHHHHHHHhccCCCeEEEeccchHHHHHHh
Confidence 455888888998721 2344445553 32 356777777654 11111222211 23467788898754 57888
Q ss_pred cCcceEEecCCcchHHHHHHhCCcEEec-ccccchhhHHHHHHhhcceeeeeccCCcccccCCCCccccHHHHHHHHHHH
Q 044031 345 ESVGGFVTHCGWSSVVEAVTYGVPMIAW-PLYAEQFLNSVALVQEMKVAMPMFLNGEEETIGNGEGVVSAERVEERVREL 423 (468)
Q Consensus 345 ~~~~~~ithgG~~s~~eal~~GvP~v~~-P~~~DQ~~na~~~~~~~g~g~~~~~~~~~~~~~~~~~~~~~~~l~~av~~~ 423 (468)
+++ +|+..|..|+.||+++|+|+|+. |..++|..|+..+.+. |+|+... +.+++.++|.++
T Consensus 274 aDl--~I~k~gg~tl~EA~a~G~PvI~~~~~pgqe~~N~~~~~~~-G~g~~~~---------------~~~~l~~~i~~l 335 (391)
T PRK13608 274 SQL--MITKPGGITISEGLARCIPMIFLNPAPGQELENALYFEEK-GFGKIAD---------------TPEEAIKIVASL 335 (391)
T ss_pred hhE--EEeCCchHHHHHHHHhCCCEEECCCCCCcchhHHHHHHhC-CcEEEeC---------------CHHHHHHHHHHH
Confidence 888 99999989999999999999998 7777778999999755 9997653 667899999999
Q ss_pred hcCch-hHHHHHHHHHHH
Q 044031 424 MMGSE-GKALRERSLEMR 440 (468)
Q Consensus 424 l~~~~-~~~~~~~a~~l~ 440 (468)
++|++ .++|++++++++
T Consensus 336 l~~~~~~~~m~~~~~~~~ 353 (391)
T PRK13608 336 TNGNEQLTNMISTMEQDK 353 (391)
T ss_pred hcCHHHHHHHHHHHHHhc
Confidence 99875 556666666543
No 39
>TIGR03590 PseG pseudaminic acid biosynthesis-associated protein PseG. This protein is found in association with enzymes involved in the biosynthesis of pseudaminic acid, a component of polysaccharide in certain Pseudomonas strains as well as a modification of flagellin in Campylobacter and Hellicobacter. The role of this protein is unclear, although it may participate in N-acetylation in conjunction with, or in the absence of PseH (TIGR03585) as it often scores above the trusted cutoff to pfam00583 representing a family of acetyltransferases.
Probab=99.54 E-value=1.9e-13 Score=128.36 Aligned_cols=104 Identities=15% Similarity=0.144 Sum_probs=76.6
Q ss_pred ceEEeccCCCcCCCHHHHHHHHHHHHh--CCCcEEEEEeCCCCccccCCChhHHhhc-cCCCeEecCCCCHH-hhhCccC
Q 044031 271 SVVFLCFGSRGTFSAPQLKEIAIGLER--SNQRFLWVVRNPSNAAEAELPEGFLERT-KERGLVVKSWAPQS-TILGHES 346 (468)
Q Consensus 271 ~~v~vs~GS~~~~~~~~~~~~~~al~~--~~~~~l~~~~~~~~~~~~~~~~~~~~~~-~~~~~~v~~~~pq~-~il~~~~ 346 (468)
+.|+|+||...... ....++++|.. .+.++.+++|.. ....+.+.... ..+|+.+..+.+++ +++..++
T Consensus 171 ~~iLi~~GG~d~~~--~~~~~l~~l~~~~~~~~i~vv~G~~-----~~~~~~l~~~~~~~~~i~~~~~~~~m~~lm~~aD 243 (279)
T TIGR03590 171 RRVLVSFGGADPDN--LTLKLLSALAESQINISITLVTGSS-----NPNLDELKKFAKEYPNIILFIDVENMAELMNEAD 243 (279)
T ss_pred CeEEEEeCCcCCcC--HHHHHHHHHhccccCceEEEEECCC-----CcCHHHHHHHHHhCCCEEEEeCHHHHHHHHHHCC
Confidence 47899999664322 34456677765 346788888875 11112232222 13578888999876 7898888
Q ss_pred cceEEecCCcchHHHHHHhCCcEEecccccchhhHHHH
Q 044031 347 VGGFVTHCGWSSVVEAVTYGVPMIAWPLYAEQFLNSVA 384 (468)
Q Consensus 347 ~~~~ithgG~~s~~eal~~GvP~v~~P~~~DQ~~na~~ 384 (468)
+ +||+|| +|++|+++.|+|+|++|+..+|..||+.
T Consensus 244 l--~Is~~G-~T~~E~~a~g~P~i~i~~~~nQ~~~a~~ 278 (279)
T TIGR03590 244 L--AIGAAG-STSWERCCLGLPSLAICLAENQQSNSQQ 278 (279)
T ss_pred E--EEECCc-hHHHHHHHcCCCEEEEEecccHHHHhhh
Confidence 8 999999 9999999999999999999999999974
No 40
>PF04101 Glyco_tran_28_C: Glycosyltransferase family 28 C-terminal domain; InterPro: IPR007235 The biosynthesis of disaccharides, oligosaccharides and polysaccharides involves the action of hundreds of different glycosyltransferases. These enzymes catalyse the transfer of sugar moieties from activated donor molecules to specific acceptor molecules, forming glycosidic bonds. A classification of glycosyltransferases using nucleotide diphospho-sugar, nucleotide monophospho-sugar and sugar phosphates (2.4.1.- from EC) and related proteins into distinct sequence based families has been described []. This classification is available on the CAZy (CArbohydrate-Active EnZymes) web site. The same three-dimensional fold is expected to occur within each of the families. Because 3-D structures are better conserved than sequences, several of the families defined on the basis of sequence similarities may have similar 3-D structures and therefore form 'clans'. Glycosyltransferase family 28 GT28 from CAZY comprises enzymes with a number of known activities; 1,2-diacylglycerol 3-beta-galactosyltransferase (2.4.1.46 from EC); 1,2-diacylglycerol 3-beta-glucosyltransferase (2.4.1.157 from EC); beta-N-acetylglucosamine transferase (2.4.1 from EC). Structural analysis suggests the C-terminal domain contains the UDP-GlcNAc binding site.; GO: 0016758 transferase activity, transferring hexosyl groups, 0030246 carbohydrate binding, 0005975 carbohydrate metabolic process, 0030259 lipid glycosylation; PDB: 2KS6_A 2JZC_A 1NLM_B 1F0K_B.
Probab=99.53 E-value=1.1e-15 Score=132.64 Aligned_cols=138 Identities=20% Similarity=0.265 Sum_probs=96.5
Q ss_pred eEEeccCCCcCCCHHH-HHHHHHHHHh--CCCcEEEEEeCCCCccccCCChhHHhhccCCCeEecCCCC-HHhhhCccCc
Q 044031 272 VVFLCFGSRGTFSAPQ-LKEIAIGLER--SNQRFLWVVRNPSNAAEAELPEGFLERTKERGLVVKSWAP-QSTILGHESV 347 (468)
Q Consensus 272 ~v~vs~GS~~~~~~~~-~~~~~~al~~--~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~p-q~~il~~~~~ 347 (468)
+|+|+.||.+...... +..+...+.. ...+++|++|.... ......+. . ...++.+.+|.+ ..+++..+++
T Consensus 1 tilv~gGs~g~~~l~~~v~~~~~~~~~~~~~~~viv~~G~~~~---~~~~~~~~-~-~~~~v~~~~~~~~m~~~m~~aDl 75 (167)
T PF04101_consen 1 TILVTGGSQGARDLNRLVLKILELLAEKHKNIQVIVQTGKNNY---EELKIKVE-N-FNPNVKVFGFVDNMAELMAAADL 75 (167)
T ss_dssp -EEEEETTTSHHHHHCCCCCHHHHHHHHHHHCCCCCCCTTCEC---HHHCCCHC-C-TTCCCEEECSSSSHHHHHHHHSE
T ss_pred CEEEEECCCCHHHHHHHHHHHHHHHhhcCCCcEEEEEECCCcH---HHHHHHHh-c-cCCcEEEEechhhHHHHHHHcCE
Confidence 4899999987432222 2223444333 25788999887610 00000111 0 115788889999 7788988888
Q ss_pred ceEEecCCcchHHHHHHhCCcEEeccccc----chhhHHHHHHhhcceeeeeccCCcccccCCCCccccHHHHHHHHHHH
Q 044031 348 GGFVTHCGWSSVVEAVTYGVPMIAWPLYA----EQFLNSVALVQEMKVAMPMFLNGEEETIGNGEGVVSAERVEERVREL 423 (468)
Q Consensus 348 ~~~ithgG~~s~~eal~~GvP~v~~P~~~----DQ~~na~~~~~~~g~g~~~~~~~~~~~~~~~~~~~~~~~l~~av~~~ 423 (468)
+|||||+||++|++++|+|+|++|... ||..||..+++. |+|..+.. .. .+.+.|.++|.++
T Consensus 76 --vIs~aG~~Ti~E~l~~g~P~I~ip~~~~~~~~q~~na~~~~~~-g~~~~~~~--------~~---~~~~~L~~~i~~l 141 (167)
T PF04101_consen 76 --VISHAGAGTIAEALALGKPAIVIPLPGAADNHQEENAKELAKK-GAAIMLDE--------SE---LNPEELAEAIEEL 141 (167)
T ss_dssp --EEECS-CHHHHHHHHCT--EEEE--TTT-T-CHHHHHHHHHHC-CCCCCSEC--------CC----SCCCHHHHHHCH
T ss_pred --EEeCCCccHHHHHHHcCCCeeccCCCCcchHHHHHHHHHHHHc-CCccccCc--------cc---CCHHHHHHHHHHH
Confidence 999999999999999999999999987 999999999865 99999874 44 6789999999999
Q ss_pred hcCch
Q 044031 424 MMGSE 428 (468)
Q Consensus 424 l~~~~ 428 (468)
+.++.
T Consensus 142 ~~~~~ 146 (167)
T PF04101_consen 142 LSDPE 146 (167)
T ss_dssp CCCHH
T ss_pred HcCcH
Confidence 98874
No 41
>TIGR03492 conserved hypothetical protein. This protein family is restricted to the Cyanobacteria, in one or two copies, save for instances in the genus Deinococcus. This protein shows some sequence similarity, especially toward the C-terminus, to lipid-A-disaccharide synthase (TIGR00215 or pfam02684). The function is unknown.
Probab=99.47 E-value=1.7e-11 Score=120.81 Aligned_cols=329 Identities=15% Similarity=0.060 Sum_probs=171.2
Q ss_pred CccCHHHHHHHHHHHHhCCCCcEEE---EEeCCCCCCchhhhhhhhccccCCCCCeeEEEcCCCCCCCCCCChhHHHHHH
Q 044031 12 AFHHMISMVELGKLILQHRSDVSIT---ILVPSMPLEESKTCSYINSISHRLNPIISFYYLPAIQMPSETLSRADIAIES 88 (468)
Q Consensus 12 ~~GHv~P~l~LA~~L~~~G~~h~Vt---~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~i~~~~lp~~~~~~~~~~~~~ 88 (468)
++|-=.-.++||++|+++-|+++|. +++.....+.. .++.. + .+..+|...+... .....+...
T Consensus 6 ghged~~a~ai~~~l~~~~~~~~v~~~p~vG~~~~~e~~----~ip~~------g-~~~~~~sgg~~~~--~~~~~~~~~ 72 (396)
T TIGR03492 6 GHGEDLIAARIAKALLQLSPDLNLEALPLVGEGRAYQNL----GIPII------G-PTKELPSGGFSYQ--SLRGLLRDL 72 (396)
T ss_pred CchHHHHHHHHHHHHHhhCCCCCeEEeCcccCCHHHhhC----CCcee------C-CCCCCCCCCccCC--CHHHHHHHH
Confidence 3444455789999999842229999 88655433221 11111 2 3333443322211 111111111
Q ss_pred HH---HhhHHHHHHHHhhhcCCCccEEEe---cCcHHHhhhCCCCeEEEecchhHHHHHHHhhhhhhhcccCCCCCCCCc
Q 044031 89 IK---LNSSNVFQALENISLTSKILSFII---TSTTSFSYHPNIPTYTYFNSCASTLAAILYLPTLHNQITSSFKDHPSS 162 (468)
Q Consensus 89 ~~---~~~~~l~~ll~~~~~~~~pD~vI~---~~~~~vA~~lgIP~i~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~ 162 (468)
.. ...-....+++++.+ +||+||+ +....+|...|+|++++.+.-.-.. .... ... ...+.
T Consensus 73 ~~gl~~~~~~~~~~~~~~~~--~p~~v~~~Gg~v~~~aA~~~~~p~~~~~~~esn~~---------~~~~-~~~-~~~~~ 139 (396)
T TIGR03492 73 RAGLVGLTLGQWRALRKWAK--KGDLIVAVGDIVPLLFAWLSGKPYAFVGTAKSDYY---------WESG-PRR-SPSDE 139 (396)
T ss_pred HhhHHHHHHHHHHHHHHHhh--cCCEEEEECcHHHHHHHHHcCCCceEEEeecccee---------ecCC-CCC-ccchh
Confidence 11 122233445555533 8999999 4455677778999998544111100 0000 000 00000
Q ss_pred cccCCCCCCCCCCCCCccccCCCchhHHHHHHHhhhhcccceEEecChhhhhHHHHHHHHcCcccCCCCCCCeeEecccc
Q 044031 163 LLFIPGLPPVKSSFMPEPVLDRQKPIYDFFLNYSTSLSKSNGIIINTFDFLEQQAIKAIVNGDCVTNGTTPPLHCIGPLI 242 (468)
Q Consensus 163 ~~~~pg~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~s~~~le~~~~~~~~~~~~~~~~~~p~~~~VGpl~ 242 (468)
...+||.. +..+ +.+....+....++.+++. .. +.+.... -++.+||-.+
T Consensus 140 ~~~~~G~~------------------~~p~-e~n~l~~~~a~~v~~~~~~-t~---~~l~~~g-------~k~~~vGnPv 189 (396)
T TIGR03492 140 YHRLEGSL------------------YLPW-ERWLMRSRRCLAVFVRDRL-TA---RDLRRQG-------VRASYLGNPM 189 (396)
T ss_pred hhccCCCc------------------cCHH-HHHHhhchhhCEEeCCCHH-HH---HHHHHCC-------CeEEEeCcCH
Confidence 11123322 1111 1233333333445555533 22 2222221 4799999777
Q ss_pred cCCcCCCCCCCCCCcchhHHhhcCCCCCceEEeccCCCcCCCHHHHHHHHHHHHh----CCCcEEEEEeCCCCccccCCC
Q 044031 243 VDAKDRAGGVSDDVSSDCLTWLDSQPSGSVVFLCFGSRGTFSAPQLKEIAIGLER----SNQRFLWVVRNPSNAAEAELP 318 (468)
Q Consensus 243 ~~~~~~~~~~~~~~~~~l~~~l~~~~~~~~v~vs~GS~~~~~~~~~~~~~~al~~----~~~~~l~~~~~~~~~~~~~~~ 318 (468)
.+..... .. . -++ +.+++|.+--||....-.+.+..++++++. .+..|++.+.+..+ ...+-
T Consensus 190 ~d~l~~~------~~-~---~l~--~~~~~lllLpGSR~ae~~~~lp~~l~al~~L~~~~~~~~v~~~~~~~~--~~~~~ 255 (396)
T TIGR03492 190 MDGLEPP------ER-K---PLL--TGRFRIALLPGSRPPEAYRNLKLLLRALEALPDSQPFVFLAAIVPSLS--LEKLQ 255 (396)
T ss_pred HhcCccc------cc-c---ccC--CCCCEEEEECCCCHHHHHccHHHHHHHHHHHhhCCCeEEEEEeCCCCC--HHHHH
Confidence 6553111 11 1 122 234588899999964444444455555544 36788888844311 00000
Q ss_pred hhHHh-h-------------ccCCCeEecCCCC-HHhhhCccCcceEEecCCcchHHHHHHhCCcEEecccccchhhHHH
Q 044031 319 EGFLE-R-------------TKERGLVVKSWAP-QSTILGHESVGGFVTHCGWSSVVEAVTYGVPMIAWPLYAEQFLNSV 383 (468)
Q Consensus 319 ~~~~~-~-------------~~~~~~~v~~~~p-q~~il~~~~~~~~ithgG~~s~~eal~~GvP~v~~P~~~DQ~~na~ 383 (468)
..+.+ . ...+++.+..+.. -..++..+++ +|+.+|..| .|+..+|+|+|.+|+..+|. |+.
T Consensus 256 ~~l~~~g~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~l~~ADl--vI~rSGt~T-~E~a~lg~P~Ilip~~~~q~-na~ 331 (396)
T TIGR03492 256 AILEDLGWQLEGSSEDQTSLFQKGTLEVLLGRGAFAEILHWADL--GIAMAGTAT-EQAVGLGKPVIQLPGKGPQF-TYG 331 (396)
T ss_pred HHHHhcCceecCCccccchhhccCceEEEechHhHHHHHHhCCE--EEECcCHHH-HHHHHhCCCEEEEeCCCCHH-HHH
Confidence 00000 0 0112344434443 4567888888 999999766 99999999999999888886 987
Q ss_pred HHHhh---cceeeeeccCCcccccCCCCccccHHHHHHHHHHHhcCc
Q 044031 384 ALVQE---MKVAMPMFLNGEEETIGNGEGVVSAERVEERVRELMMGS 427 (468)
Q Consensus 384 ~~~~~---~g~g~~~~~~~~~~~~~~~~~~~~~~~l~~av~~~l~~~ 427 (468)
.+++. .|.++.+.. .+.+.|.+++.++++|+
T Consensus 332 ~~~~~~~l~g~~~~l~~-------------~~~~~l~~~l~~ll~d~ 365 (396)
T TIGR03492 332 FAEAQSRLLGGSVFLAS-------------KNPEQAAQVVRQLLADP 365 (396)
T ss_pred HHHhhHhhcCCEEecCC-------------CCHHHHHHHHHHHHcCH
Confidence 76532 266666652 35589999999999987
No 42
>PLN02605 monogalactosyldiacylglycerol synthase
Probab=99.46 E-value=3.6e-11 Score=118.85 Aligned_cols=179 Identities=17% Similarity=0.153 Sum_probs=108.8
Q ss_pred CCeeEecccccCCcCCCCCCCCCCcchhHHhhcCCCCCceEEeccCCCcCCCHHHHHH-HHHHHH-----hCCCcEEEEE
Q 044031 233 PPLHCIGPLIVDAKDRAGGVSDDVSSDCLTWLDSQPSGSVVFLCFGSRGTFSAPQLKE-IAIGLE-----RSNQRFLWVV 306 (468)
Q Consensus 233 p~~~~VGpl~~~~~~~~~~~~~~~~~~l~~~l~~~~~~~~v~vs~GS~~~~~~~~~~~-~~~al~-----~~~~~~l~~~ 306 (468)
.+++.+|..+......... ...++.+-+.-.+++++|.+..|+.+......+.+ +...+. ..+.++++++
T Consensus 173 ~ki~v~g~~v~~~f~~~~~----~~~~~r~~~gl~~~~~~il~~Gg~~g~~~~~~li~~l~~~~~~~~~~~~~~~~~vi~ 248 (382)
T PLN02605 173 SQIRVYGLPIRPSFARAVR----PKDELRRELGMDEDLPAVLLMGGGEGMGPLEETARALGDSLYDKNLGKPIGQVVVIC 248 (382)
T ss_pred HHEEEECcccCHhhccCCC----CHHHHHHHcCCCCCCcEEEEECCCcccccHHHHHHHHHHhhccccccCCCceEEEEE
Confidence 4677888665433211100 12223333333344557777777776444433322 322221 2345667777
Q ss_pred eCCCCccccCCChhHHhhccCCCeEecCCCCHH-hhhCccCcceEEecCCcchHHHHHHhCCcEEecccccchh-hHHHH
Q 044031 307 RNPSNAAEAELPEGFLERTKERGLVVKSWAPQS-TILGHESVGGFVTHCGWSSVVEAVTYGVPMIAWPLYAEQF-LNSVA 384 (468)
Q Consensus 307 ~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~pq~-~il~~~~~~~~ithgG~~s~~eal~~GvP~v~~P~~~DQ~-~na~~ 384 (468)
|.+ ..+-+.+.+.....++.+.+|+++. +++..+++ +|+.+|.+|++||+++|+|+|+.+....|. .|+..
T Consensus 249 G~~-----~~~~~~L~~~~~~~~v~~~G~~~~~~~l~~aaDv--~V~~~g~~ti~EAma~g~PvI~~~~~pgqe~gn~~~ 321 (382)
T PLN02605 249 GRN-----KKLQSKLESRDWKIPVKVRGFVTNMEEWMGACDC--IITKAGPGTIAEALIRGLPIILNGYIPGQEEGNVPY 321 (382)
T ss_pred CCC-----HHHHHHHHhhcccCCeEEEeccccHHHHHHhCCE--EEECCCcchHHHHHHcCCCEEEecCCCccchhhHHH
Confidence 754 0011112211112357777888854 56777777 999999999999999999999998766665 69988
Q ss_pred HHhhcceeeeeccCCcccccCCCCccccHHHHHHHHHHHhcC-ch-hHHHHHHHHH
Q 044031 385 LVQEMKVAMPMFLNGEEETIGNGEGVVSAERVEERVRELMMG-SE-GKALRERSLE 438 (468)
Q Consensus 385 ~~~~~g~g~~~~~~~~~~~~~~~~~~~~~~~l~~av~~~l~~-~~-~~~~~~~a~~ 438 (468)
+.+. |.|+.+ -+.+++.++|.+++.| ++ .++|++++++
T Consensus 322 i~~~-g~g~~~---------------~~~~~la~~i~~ll~~~~~~~~~m~~~~~~ 361 (382)
T PLN02605 322 VVDN-GFGAFS---------------ESPKEIARIVAEWFGDKSDELEAMSENALK 361 (382)
T ss_pred HHhC-Cceeec---------------CCHHHHHHHHHHHHcCCHHHHHHHHHHHHH
Confidence 8755 888754 2678999999999987 63 3445555444
No 43
>COG4671 Predicted glycosyl transferase [General function prediction only]
Probab=99.38 E-value=3.6e-10 Score=103.85 Aligned_cols=327 Identities=14% Similarity=0.180 Sum_probs=183.8
Q ss_pred ceEEEecCC--CccCHHHHHHHHHHHHhC--CCCcEEEEEeCCCCCCchhhhhhhhccccCCCCCeeEEEcCCCCCCC-C
Q 044031 3 KTIALYPGP--AFHHMISMVELGKLILQH--RSDVSITILVPSMPLEESKTCSYINSISHRLNPIISFYYLPAIQMPS-E 77 (468)
Q Consensus 3 ~~Iv~~~~~--~~GHv~P~l~LA~~L~~~--G~~h~Vt~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~i~~~~lp~-~ 77 (468)
+||+|++.- +-||+..++.+|+.|.+. | .+|++++..++.... . ...+++|+.+|....-+ +
T Consensus 10 ~Ri~~Yshd~~GlGHlrR~~~Ia~aLv~d~~~--~~Il~IsG~~~~~~F---------~--~~~gVd~V~LPsl~k~~~G 76 (400)
T COG4671 10 PRILFYSHDLLGLGHLRRALRIAHALVEDYLG--FDILIISGGPPAGGF---------P--GPAGVDFVKLPSLIKGDNG 76 (400)
T ss_pred ceEEEEehhhccchHHHHHHHHHHHHhhcccC--ceEEEEeCCCccCCC---------C--CcccCceEecCceEecCCC
Confidence 489999984 789999999999999998 8 999999887765421 0 33589999998662111 2
Q ss_pred CCChhHH---HHHHHHHhhHHHHHHHHhhhcCCCccEEEe---cCcHHHhhhCCCCeEEEecchhHHHHHHHhhhhhhhc
Q 044031 78 TLSRADI---AIESIKLNSSNVFQALENISLTSKILSFII---TSTTSFSYHPNIPTYTYFNSCASTLAAILYLPTLHNQ 151 (468)
Q Consensus 78 ~~~~~~~---~~~~~~~~~~~l~~ll~~~~~~~~pD~vI~---~~~~~vA~~lgIP~i~~~~~~~~~~~~~~~~p~~~~~ 151 (468)
.....+. ..+....-...+....+.+ +||++|+ +.+.. -|-+ |. +..+...
T Consensus 77 ~~~~~d~~~~l~e~~~~Rs~lil~t~~~f----kPDi~IVd~~P~Glr-~EL~--pt----------------L~yl~~~ 133 (400)
T COG4671 77 EYGLVDLDGDLEETKKLRSQLILSTAETF----KPDIFIVDKFPFGLR-FELL--PT----------------LEYLKTT 133 (400)
T ss_pred ceeeeecCCCHHHHHHHHHHHHHHHHHhc----CCCEEEEeccccchh-hhhh--HH----------------HHHHhhc
Confidence 1111111 2233333333334444444 9999999 43311 0000 10 0000000
Q ss_pred ccCCCCCCCCccccCCCCCCCCCCCCCccccCCCchh-HHHHHHHhhhhcc-cceEEe---cChhhhhHHHHHHHHcCcc
Q 044031 152 ITSSFKDHPSSLLFIPGLPPVKSSFMPEPVLDRQKPI-YDFFLNYSTSLSK-SNGIII---NTFDFLEQQAIKAIVNGDC 226 (468)
Q Consensus 152 ~~~~~~~~~~~~~~~pg~~~~~~~~l~~~~~~~~~~~-~~~~~~~~~~~~~-~~~~l~---~s~~~le~~~~~~~~~~~~ 226 (468)
.+..+ +..+++.+......+.+ -+.. ...+.+ .+.+++ +.|+++...+.....
T Consensus 134 ----------~t~~v-----L~lr~i~D~p~~~~~~w~~~~~---~~~I~r~yD~V~v~GdP~f~d~~~~~~~~~~---- 191 (400)
T COG4671 134 ----------GTRLV-----LGLRSIRDIPQELEADWRRAET---VRLINRFYDLVLVYGDPDFYDPLTEFPFAPA---- 191 (400)
T ss_pred ----------CCcce-----eehHhhhhchhhhccchhhhHH---HHHHHHhheEEEEecCccccChhhcCCccHh----
Confidence 00001 11112211111111000 0011 111111 122232 344444333210000
Q ss_pred cCCCCCCCeeEecccccCCcCCCCCCCCCCcchhHHhhcCCCCCceEEeccCCCcCCCHHHHHHHHHHHHh-CCCc--EE
Q 044031 227 VTNGTTPPLHCIGPLIVDAKDRAGGVSDDVSSDCLTWLDSQPSGSVVFLCFGSRGTFSAPQLKEIAIGLER-SNQR--FL 303 (468)
Q Consensus 227 ~~~~~~p~~~~VGpl~~~~~~~~~~~~~~~~~~l~~~l~~~~~~~~v~vs~GS~~~~~~~~~~~~~~al~~-~~~~--~l 303 (468)
-..++.++|.+..+- +..+ .+ |... +++--|+||-|--. ...+.+...++|-.. .+.+ .+
T Consensus 192 ----i~~k~~ytG~vq~~~--~~~~----~p-----~~~~-pE~~~Ilvs~GGG~-dG~eLi~~~l~A~~~l~~l~~~~~ 254 (400)
T COG4671 192 ----IRAKMRYTGFVQRSL--PHLP----LP-----PHEA-PEGFDILVSVGGGA-DGAELIETALAAAQLLAGLNHKWL 254 (400)
T ss_pred ----hhhheeEeEEeeccC--cCCC----CC-----CcCC-CccceEEEecCCCh-hhHHHHHHHHHHhhhCCCCCcceE
Confidence 015789999993221 1101 11 1111 33347777776653 234445555555543 3444 66
Q ss_pred EEEeCCCCccccCCChhHHhhc-----cCCCeEecCCCCHH-hhhCccCcceEEecCCcchHHHHHHhCCcEEecccc--
Q 044031 304 WVVRNPSNAAEAELPEGFLERT-----KERGLVVKSWAPQS-TILGHESVGGFVTHCGWSSVVEAVTYGVPMIAWPLY-- 375 (468)
Q Consensus 304 ~~~~~~~~~~~~~~~~~~~~~~-----~~~~~~v~~~~pq~-~il~~~~~~~~ithgG~~s~~eal~~GvP~v~~P~~-- 375 (468)
.++|.. .|+.-..+. +.+++.+..|-.+. .++..++. +|+-||.||+.|-+++|||.+++|..
T Consensus 255 ivtGP~-------MP~~~r~~l~~~A~~~p~i~I~~f~~~~~~ll~gA~~--vVSm~GYNTvCeILs~~k~aLivPr~~p 325 (400)
T COG4671 255 IVTGPF-------MPEAQRQKLLASAPKRPHISIFEFRNDFESLLAGARL--VVSMGGYNTVCEILSFGKPALIVPRAAP 325 (400)
T ss_pred EEeCCC-------CCHHHHHHHHHhcccCCCeEEEEhhhhHHHHHHhhhe--eeecccchhhhHHHhCCCceEEeccCCC
Confidence 667665 565433222 23678888887654 56666666 99999999999999999999999985
Q ss_pred -cchhhHHHHHHhhcceeeeeccCCcccccCCCCccccHHHHHHHHHHHhc
Q 044031 376 -AEQFLNSVALVQEMKVAMPMFLNGEEETIGNGEGVVSAERVEERVRELMM 425 (468)
Q Consensus 376 -~DQ~~na~~~~~~~g~g~~~~~~~~~~~~~~~~~~~~~~~l~~av~~~l~ 425 (468)
.+|-.-|.|++ ++|+.=.+-+ ++ ++++.+++++...++
T Consensus 326 ~eEQliRA~Rl~-~LGL~dvL~p--------e~---lt~~~La~al~~~l~ 364 (400)
T COG4671 326 REEQLIRAQRLE-ELGLVDVLLP--------EN---LTPQNLADALKAALA 364 (400)
T ss_pred cHHHHHHHHHHH-hcCcceeeCc--------cc---CChHHHHHHHHhccc
Confidence 48999999995 7899877764 56 999999999999987
No 44
>PLN02871 UDP-sulfoquinovose:DAG sulfoquinovosyltransferase
Probab=99.28 E-value=5.5e-09 Score=106.09 Aligned_cols=141 Identities=18% Similarity=0.159 Sum_probs=90.2
Q ss_pred eEEeccCCCcCCCHHHHHHHHHHHHhC-CCcEEEEEeCCCCccccCCChhHHhhccCCCeEecCCCCHHh---hhCccCc
Q 044031 272 VVFLCFGSRGTFSAPQLKEIAIGLERS-NQRFLWVVRNPSNAAEAELPEGFLERTKERGLVVKSWAPQST---ILGHESV 347 (468)
Q Consensus 272 ~v~vs~GS~~~~~~~~~~~~~~al~~~-~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~pq~~---il~~~~~ 347 (468)
.+++..|++.. .+.+..++++++.. +.+++++ |.+. ..+.+.+.....++.+.+++++.+ ++..+++
T Consensus 264 ~~i~~vGrl~~--~K~~~~li~a~~~~~~~~l~iv-G~G~------~~~~l~~~~~~~~V~f~G~v~~~ev~~~~~~aDv 334 (465)
T PLN02871 264 PLIVYVGRLGA--EKNLDFLKRVMERLPGARLAFV-GDGP------YREELEKMFAGTPTVFTGMLQGDELSQAYASGDV 334 (465)
T ss_pred eEEEEeCCCch--hhhHHHHHHHHHhCCCcEEEEE-eCCh------HHHHHHHHhccCCeEEeccCCHHHHHHHHHHCCE
Confidence 55566688752 23355577777664 5665544 4320 112333333445788889998655 6667777
Q ss_pred ceEEecCC----cchHHHHHHhCCcEEecccccchhhHHHHHHh--hcceeeeeccCCcccccCCCCccccHHHHHHHHH
Q 044031 348 GGFVTHCG----WSSVVEAVTYGVPMIAWPLYAEQFLNSVALVQ--EMKVAMPMFLNGEEETIGNGEGVVSAERVEERVR 421 (468)
Q Consensus 348 ~~~ithgG----~~s~~eal~~GvP~v~~P~~~DQ~~na~~~~~--~~g~g~~~~~~~~~~~~~~~~~~~~~~~l~~av~ 421 (468)
||.-.. ..++.||+++|+|+|+....+ ....+.+ .-+.|..++. -+.+++.++|.
T Consensus 335 --~V~pS~~E~~g~~vlEAmA~G~PVI~s~~gg----~~eiv~~~~~~~~G~lv~~-------------~d~~~la~~i~ 395 (465)
T PLN02871 335 --FVMPSESETLGFVVLEAMASGVPVVAARAGG----IPDIIPPDQEGKTGFLYTP-------------GDVDDCVEKLE 395 (465)
T ss_pred --EEECCcccccCcHHHHHHHcCCCEEEcCCCC----cHhhhhcCCCCCceEEeCC-------------CCHHHHHHHHH
Confidence 774433 347899999999999876532 2233322 1377888864 36789999999
Q ss_pred HHhcCch-hHHHHHHHHHHH
Q 044031 422 ELMMGSE-GKALRERSLEMR 440 (468)
Q Consensus 422 ~~l~~~~-~~~~~~~a~~l~ 440 (468)
++++|++ .++|.+++++..
T Consensus 396 ~ll~~~~~~~~~~~~a~~~~ 415 (465)
T PLN02871 396 TLLADPELRERMGAAAREEV 415 (465)
T ss_pred HHHhCHHHHHHHHHHHHHHH
Confidence 9999886 566777776644
No 45
>cd03814 GT1_like_2 This family is most closely related to the GT1 family of glycosyltransferases. Glycosyltransferases catalyze the transfer of sugar moieties from activated donor molecules to specific acceptor molecules, forming glycosidic bonds. The acceptor molecule can be a lipid, a protein, a heterocyclic compound, or another carbohydrate residue. This group of glycosyltransferases is most closely related to the previously defined glycosyltransferase family 1 (GT1). The members of this family may transfer UDP, ADP, GDP, or CMP linked sugars. The diverse enzymatic activities among members of this family reflect a wide range of biological functions. The protein structure available for this family has the GTB topology, one of the two protein topologies observed for nucleotide-sugar-dependent glycosyltransferases. GTB proteins have distinct N- and C- terminal domains each containing a typical Rossmann fold. The two domains have high structural homology despite minimal sequence homolog
Probab=99.27 E-value=1.1e-08 Score=100.02 Aligned_cols=140 Identities=16% Similarity=0.147 Sum_probs=89.3
Q ss_pred eEEeccCCCcC-CCHHHHHHHHHHHHhC-CCcEEEEEeCCCCccccCCChhHHhhccCCCeEecCCCCHHh---hhCccC
Q 044031 272 VVFLCFGSRGT-FSAPQLKEIAIGLERS-NQRFLWVVRNPSNAAEAELPEGFLERTKERGLVVKSWAPQST---ILGHES 346 (468)
Q Consensus 272 ~v~vs~GS~~~-~~~~~~~~~~~al~~~-~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~pq~~---il~~~~ 346 (468)
.+++..|+... ...+.+.+++..+... +..+++ +|...+ .+.+. ....++.+.+|+++.+ ++..++
T Consensus 198 ~~i~~~G~~~~~k~~~~~i~~~~~l~~~~~~~l~i-~G~~~~------~~~~~--~~~~~v~~~g~~~~~~~~~~~~~~d 268 (364)
T cd03814 198 PVLLYVGRLAPEKNLEALLDADLPLRRRPPVRLVI-VGDGPA------RARLE--ARYPNVHFLGFLDGEELAAAYASAD 268 (364)
T ss_pred eEEEEEeccccccCHHHHHHHHHHhhhcCCceEEE-EeCCch------HHHHh--ccCCcEEEEeccCHHHHHHHHHhCC
Confidence 66677787652 2334444555555432 445544 443310 01111 2346788889998765 677888
Q ss_pred cceEEecCC----cchHHHHHHhCCcEEecccccchhhHHHHHHhhcceeeeeccCCcccccCCCCccccHHHHHHHHHH
Q 044031 347 VGGFVTHCG----WSSVVEAVTYGVPMIAWPLYAEQFLNSVALVQEMKVAMPMFLNGEEETIGNGEGVVSAERVEERVRE 422 (468)
Q Consensus 347 ~~~~ithgG----~~s~~eal~~GvP~v~~P~~~DQ~~na~~~~~~~g~g~~~~~~~~~~~~~~~~~~~~~~~l~~av~~ 422 (468)
+ +|..+. .+++.||+++|+|+|+.+..+ +...+.+ .+.|..... -+.+++.+++.+
T Consensus 269 ~--~l~~s~~e~~~~~~lEa~a~g~PvI~~~~~~----~~~~i~~-~~~g~~~~~-------------~~~~~l~~~i~~ 328 (364)
T cd03814 269 V--FVFPSRTETFGLVVLEAMASGLPVVAPDAGG----PADIVTD-GENGLLVEP-------------GDAEAFAAALAA 328 (364)
T ss_pred E--EEECcccccCCcHHHHHHHcCCCEEEcCCCC----chhhhcC-CcceEEcCC-------------CCHHHHHHHHHH
Confidence 7 776654 478999999999999988654 4455543 378887763 467789999999
Q ss_pred HhcCch-hHHHHHHHHHHH
Q 044031 423 LMMGSE-GKALRERSLEMR 440 (468)
Q Consensus 423 ~l~~~~-~~~~~~~a~~l~ 440 (468)
++.|++ .+++.+++++..
T Consensus 329 l~~~~~~~~~~~~~~~~~~ 347 (364)
T cd03814 329 LLADPELRRRMAARARAEA 347 (364)
T ss_pred HHcCHHHHHHHHHHHHHHH
Confidence 999885 455555554433
No 46
>cd03800 GT1_Sucrose_synthase This family is most closely related to the GT1 family of glycosyltransferases. The sucrose-phosphate synthases in this family may be unique to plants and photosynthetic bacteria. This enzyme catalyzes the synthesis of sucrose 6-phosphate from fructose 6-phosphate and uridine 5'-diphosphate-glucose, a key regulatory step of sucrose metabolism. The activity of this enzyme is regulated by phosphorylation and moderated by the concentration of various metabolites and light.
Probab=99.22 E-value=3.3e-08 Score=98.15 Aligned_cols=148 Identities=13% Similarity=0.101 Sum_probs=88.3
Q ss_pred eEEeccCCCcC-CCHHHHHHHHHHHHh--CCCcEEEEEeCCCCccccCCC--hhHHhhc-cCCCeEecCCCCHHh---hh
Q 044031 272 VVFLCFGSRGT-FSAPQLKEIAIGLER--SNQRFLWVVRNPSNAAEAELP--EGFLERT-KERGLVVKSWAPQST---IL 342 (468)
Q Consensus 272 ~v~vs~GS~~~-~~~~~~~~~~~al~~--~~~~~l~~~~~~~~~~~~~~~--~~~~~~~-~~~~~~v~~~~pq~~---il 342 (468)
.+++..|+... ...+.+.+.+..+.. .+..++++.+........... ..+.+.. ...++.+.+|+|+.+ ++
T Consensus 221 ~~i~~~gr~~~~k~~~~ll~a~~~l~~~~~~~~l~i~G~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~g~~~~~~~~~~~ 300 (398)
T cd03800 221 PRILAVGRLDPRKGIDTLIRAYAELPELRERANLVIVGGPRDDILAMDEEELRELARELGVIDRVDFPGRVSREDLPALY 300 (398)
T ss_pred cEEEEEcccccccCHHHHHHHHHHHHHhCCCeEEEEEECCCCcchhhhhHHHHHHHHhcCCCceEEEeccCCHHHHHHHH
Confidence 66677788752 223333333343432 245666554433110000000 0111111 246788889999766 47
Q ss_pred CccCcceEEec----CCcchHHHHHHhCCcEEecccccchhhHHHHHHhhcceeeeeccCCcccccCCCCccccHHHHHH
Q 044031 343 GHESVGGFVTH----CGWSSVVEAVTYGVPMIAWPLYAEQFLNSVALVQEMKVAMPMFLNGEEETIGNGEGVVSAERVEE 418 (468)
Q Consensus 343 ~~~~~~~~ith----gG~~s~~eal~~GvP~v~~P~~~DQ~~na~~~~~~~g~g~~~~~~~~~~~~~~~~~~~~~~~l~~ 418 (468)
..+++ ++.. +-..++.||+++|+|+|+-...+ ....+. .-+.|...+. -+.+++.+
T Consensus 301 ~~adi--~l~ps~~e~~~~~l~Ea~a~G~Pvi~s~~~~----~~e~i~-~~~~g~~~~~-------------~~~~~l~~ 360 (398)
T cd03800 301 RAADV--FVNPALYEPFGLTALEAMACGLPVVATAVGG----PRDIVV-DGVTGLLVDP-------------RDPEALAA 360 (398)
T ss_pred HhCCE--EEecccccccCcHHHHHHhcCCCEEECCCCC----HHHHcc-CCCCeEEeCC-------------CCHHHHHH
Confidence 77777 6633 22368999999999999876543 444554 4368888763 47899999
Q ss_pred HHHHHhcCch-hHHHHHHHHHH
Q 044031 419 RVRELMMGSE-GKALRERSLEM 439 (468)
Q Consensus 419 av~~~l~~~~-~~~~~~~a~~l 439 (468)
+|.+++++++ .+++.++|++.
T Consensus 361 ~i~~l~~~~~~~~~~~~~a~~~ 382 (398)
T cd03800 361 ALRRLLTDPALRRRLSRAGLRR 382 (398)
T ss_pred HHHHHHhCHHHHHHHHHHHHHH
Confidence 9999998875 45566666554
No 47
>cd03794 GT1_wbuB_like This family is most closely related to the GT1 family of glycosyltransferases. wbuB in E. coli is involved in the biosynthesis of the O26 O-antigen. It has been proposed to function as an N-acetyl-L-fucosamine (L-FucNAc) transferase.
Probab=99.13 E-value=8e-08 Score=94.41 Aligned_cols=147 Identities=20% Similarity=0.158 Sum_probs=89.9
Q ss_pred CceEEeccCCCcC-CCHHHHHHHHHHHHhC-CCcEEEEEeCCCCccccCCChhHHh---hccCCCeEecCCCCHHh---h
Q 044031 270 GSVVFLCFGSRGT-FSAPQLKEIAIGLERS-NQRFLWVVRNPSNAAEAELPEGFLE---RTKERGLVVKSWAPQST---I 341 (468)
Q Consensus 270 ~~~v~vs~GS~~~-~~~~~~~~~~~al~~~-~~~~l~~~~~~~~~~~~~~~~~~~~---~~~~~~~~v~~~~pq~~---i 341 (468)
++.+++..|+... ...+.+.+++..+... +.++++ +|... ..+.+.+ .....++.+.+++++.+ +
T Consensus 219 ~~~~i~~~G~~~~~k~~~~l~~~~~~l~~~~~~~l~i-~G~~~------~~~~~~~~~~~~~~~~v~~~g~~~~~~~~~~ 291 (394)
T cd03794 219 DKFVVLYAGNIGRAQGLDTLLEAAALLKDRPDIRFLI-VGDGP------EKEELKELAKALGLDNVTFLGRVPKEELPEL 291 (394)
T ss_pred CcEEEEEecCcccccCHHHHHHHHHHHhhcCCeEEEE-eCCcc------cHHHHHHHHHHcCCCcEEEeCCCChHHHHHH
Confidence 3477777888753 2334444444544443 455544 44431 0112221 22346788888998665 5
Q ss_pred hCccCcceEEecCC-------cchHHHHHHhCCcEEecccccchhhHHHHHHhhcceeeeeccCCcccccCCCCccccHH
Q 044031 342 LGHESVGGFVTHCG-------WSSVVEAVTYGVPMIAWPLYAEQFLNSVALVQEMKVAMPMFLNGEEETIGNGEGVVSAE 414 (468)
Q Consensus 342 l~~~~~~~~ithgG-------~~s~~eal~~GvP~v~~P~~~DQ~~na~~~~~~~g~g~~~~~~~~~~~~~~~~~~~~~~ 414 (468)
+..+++.++-++.+ .+++.||+++|+|+|+.+..+.+... .+. +.|..++. -+.+
T Consensus 292 ~~~~di~i~~~~~~~~~~~~~p~~~~Ea~~~G~pvi~~~~~~~~~~~----~~~-~~g~~~~~-------------~~~~ 353 (394)
T cd03794 292 LAAADVGLVPLKPGPAFEGVSPSKLFEYMAAGKPVLASVDGESAELV----EEA-GAGLVVPP-------------GDPE 353 (394)
T ss_pred HHhhCeeEEeccCcccccccCchHHHHHHHCCCcEEEecCCCchhhh----ccC-CcceEeCC-------------CCHH
Confidence 66777733323322 23479999999999999876654433 222 67777763 4788
Q ss_pred HHHHHHHHHhcCch-hHHHHHHHHHHHH
Q 044031 415 RVEERVRELMMGSE-GKALRERSLEMRM 441 (468)
Q Consensus 415 ~l~~av~~~l~~~~-~~~~~~~a~~l~~ 441 (468)
++.++|.++++|++ .+++++++++...
T Consensus 354 ~l~~~i~~~~~~~~~~~~~~~~~~~~~~ 381 (394)
T cd03794 354 ALAAAILELLDDPEERAEMGENGRRYVE 381 (394)
T ss_pred HHHHHHHHHHhChHHHHHHHHHHHHHHH
Confidence 99999999998875 5666666665544
No 48
>PF03033 Glyco_transf_28: Glycosyltransferase family 28 N-terminal domain; InterPro: IPR004276 The biosynthesis of disaccharides, oligosaccharides and polysaccharides involves the action of hundreds of different glycosyltransferases. These enzymes catalyse the transfer of sugar moieties from activated donor molecules to specific acceptor molecules, forming glycosidic bonds. A classification of glycosyltransferases using nucleotide diphospho-sugar, nucleotide monophospho-sugar and sugar phosphates (2.4.1.- from EC) and related proteins into distinct sequence based families has been described []. This classification is available on the CAZy (CArbohydrate-Active EnZymes) web site. The same three-dimensional fold is expected to occur within each of the families. Because 3-D structures are better conserved than sequences, several of the families defined on the basis of sequence similarities may have similar 3-D structures and therefore form 'clans'. Glycosyltransferase family 28 GT28 from CAZY comprises enzymes with a number of known activities; 1,2-diacylglycerol 3-beta-galactosyltransferase (2.4.1.46 from EC); 1,2-diacylglycerol 3-beta-glucosyltransferase (2.4.1.157 from EC); beta-N-acetylglucosamine transferase (2.4.1 from EC).; GO: 0016758 transferase activity, transferring hexosyl groups, 0005975 carbohydrate metabolic process, 0030259 lipid glycosylation; PDB: 2IYF_B 2YJN_A 2P6P_A 1PNV_A 3H4T_A 3H4I_A 1PN3_B 3IA7_B 1NLM_B 1F0K_B ....
Probab=99.13 E-value=1.1e-11 Score=103.99 Aligned_cols=118 Identities=11% Similarity=0.065 Sum_probs=70.9
Q ss_pred EEEecCCCccCHHHHHHHHHHHHhCCCCcEEEEEeCCCCCCchhhhhhhhccccCCCCCeeEEEcCCC-CCCCCCCChhH
Q 044031 5 IALYPGPAFHHMISMVELGKLILQHRSDVSITILVPSMPLEESKTCSYINSISHRLNPIISFYYLPAI-QMPSETLSRAD 83 (468)
Q Consensus 5 Iv~~~~~~~GHv~P~l~LA~~L~~~G~~h~Vt~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~i~~~-~lp~~~~~~~~ 83 (468)
|+|++.|+.||++|+++||++|++|| |+|+++++.... ..++. .|++|..++.. .++........
T Consensus 1 Ili~~~Gt~Ghv~P~lala~~L~~rG--h~V~~~~~~~~~------~~v~~------~Gl~~~~~~~~~~~~~~~~~~~~ 66 (139)
T PF03033_consen 1 ILIATGGTRGHVYPFLALARALRRRG--HEVRLATPPDFR------ERVEA------AGLEFVPIPGDSRLPRSLEPLAN 66 (139)
T ss_dssp EEEEEESSHHHHHHHHHHHHHHHHTT---EEEEEETGGGH------HHHHH------TT-EEEESSSCGGGGHHHHHHHH
T ss_pred CEEEEcCChhHHHHHHHHHHHHhccC--CeEEEeecccce------ecccc------cCceEEEecCCcCcCcccchhhh
Confidence 78999999999999999999999999 999999664422 23322 38999988766 12111000000
Q ss_pred HHHHHHH--HhhHHHHHHHHhhh--------cCCCccEEEe----cCcHHHhhhCCCCeEEEecchhH
Q 044031 84 IAIESIK--LNSSNVFQALENIS--------LTSKILSFII----TSTTSFSYHPNIPTYTYFNSCAS 137 (468)
Q Consensus 84 ~~~~~~~--~~~~~l~~ll~~~~--------~~~~pD~vI~----~~~~~vA~~lgIP~i~~~~~~~~ 137 (468)
+..... .......+.+++.. .....|+++. ..+..+||++|||++.....+.+
T Consensus 67 -~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~vaE~~~iP~~~~~~~p~~ 133 (139)
T PF03033_consen 67 -LRRLARLIRGLEEAMRILARFRPDLVVAAGGYVADDVIIAAPLAFAAALVAEQLGIPGVANRLFPWF 133 (139)
T ss_dssp -HHCHHHHHHHHHHHHHHHHHHHHCCCCHCTTTTECCEECHHHHHTHHHHHHHHHTS-EEEEESSGGG
T ss_pred -hhhHHHHhhhhhHHHHHhhccCcchhhhccCcccchHHHhhhhcCccceeEhhhCchHHHHhhCCcC
Confidence 111111 12222333333322 1135666665 55677999999999998876644
No 49
>cd03823 GT1_ExpE7_like This family is most closely related to the GT1 family of glycosyltransferases. ExpE7 in Sinorhizobium meliloti has been shown to be involved in the biosynthesis of galactoglucans (exopolysaccharide II).
Probab=99.10 E-value=1.2e-07 Score=92.19 Aligned_cols=142 Identities=19% Similarity=0.104 Sum_probs=85.9
Q ss_pred ceEEeccCCCcC-CCHHHHHHHHHHHHhCCCcEEEEEeCCCCccccCCChhHHhhccCCCeEecCCCCHHh---hhCccC
Q 044031 271 SVVFLCFGSRGT-FSAPQLKEIAIGLERSNQRFLWVVRNPSNAAEAELPEGFLERTKERGLVVKSWAPQST---ILGHES 346 (468)
Q Consensus 271 ~~v~vs~GS~~~-~~~~~~~~~~~al~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~pq~~---il~~~~ 346 (468)
..+++..|++.. ...+.+.+++..+...+.++++ +|.... ............++.+.+++++.+ ++..++
T Consensus 191 ~~~i~~~G~~~~~k~~~~li~~~~~l~~~~~~l~i-~G~~~~-----~~~~~~~~~~~~~v~~~g~~~~~~~~~~~~~ad 264 (359)
T cd03823 191 RLRFGFIGQLTPHKGVDLLLEAFKRLPRGDIELVI-VGNGLE-----LEEESYELEGDPRVEFLGAYPQEEIDDFYAEID 264 (359)
T ss_pred ceEEEEEecCccccCHHHHHHHHHHHHhcCcEEEE-EcCchh-----hhHHHHhhcCCCeEEEeCCCCHHHHHHHHHhCC
Confidence 366677788752 2233333444444333566554 444310 000000001346788889998665 477777
Q ss_pred cceEE--ec--CC-cchHHHHHHhCCcEEecccccchhhHHHHHHhhcceeeeeccCCcccccCCCCccccHHHHHHHHH
Q 044031 347 VGGFV--TH--CG-WSSVVEAVTYGVPMIAWPLYAEQFLNSVALVQEMKVAMPMFLNGEEETIGNGEGVVSAERVEERVR 421 (468)
Q Consensus 347 ~~~~i--th--gG-~~s~~eal~~GvP~v~~P~~~DQ~~na~~~~~~~g~g~~~~~~~~~~~~~~~~~~~~~~~l~~av~ 421 (468)
+ +| ++ .| ..++.||+++|+|+|+.+.. .+...+.+. +.|..+.. -+.+++.+++.
T Consensus 265 ~--~i~ps~~~e~~~~~~~Ea~a~G~Pvi~~~~~----~~~e~i~~~-~~g~~~~~-------------~d~~~l~~~i~ 324 (359)
T cd03823 265 V--LVVPSIWPENFPLVIREALAAGVPVIASDIG----GMAELVRDG-VNGLLFPP-------------GDAEDLAAALE 324 (359)
T ss_pred E--EEEcCcccCCCChHHHHHHHCCCCEEECCCC----CHHHHhcCC-CcEEEECC-------------CCHHHHHHHHH
Confidence 7 55 32 33 34799999999999997653 455556432 57888763 36889999999
Q ss_pred HHhcCch-hHHHHHHHHH
Q 044031 422 ELMMGSE-GKALRERSLE 438 (468)
Q Consensus 422 ~~l~~~~-~~~~~~~a~~ 438 (468)
++++|++ .+++++++++
T Consensus 325 ~l~~~~~~~~~~~~~~~~ 342 (359)
T cd03823 325 RLIDDPDLLERLRAGIEP 342 (359)
T ss_pred HHHhChHHHHHHHHhHHH
Confidence 9999885 4555555544
No 50
>PRK05749 3-deoxy-D-manno-octulosonic-acid transferase; Reviewed
Probab=99.09 E-value=5.1e-08 Score=97.97 Aligned_cols=85 Identities=21% Similarity=0.260 Sum_probs=61.3
Q ss_pred hhhCccCcceEEe----cCCcchHHHHHHhCCcEEecccccchhhHHHHHHhhcceeeeeccCCcccccCCCCccccHHH
Q 044031 340 TILGHESVGGFVT----HCGWSSVVEAVTYGVPMIAWPLYAEQFLNSVALVQEMKVAMPMFLNGEEETIGNGEGVVSAER 415 (468)
Q Consensus 340 ~il~~~~~~~~it----hgG~~s~~eal~~GvP~v~~P~~~DQ~~na~~~~~~~g~g~~~~~~~~~~~~~~~~~~~~~~~ 415 (468)
.+++.+++ +|+. -+|..++.||+++|+|+|+-|..+++......+.+. |+++.. -+.++
T Consensus 315 ~~y~~aDi-~~v~~S~~e~~g~~~lEAma~G~PVI~g~~~~~~~e~~~~~~~~-g~~~~~---------------~d~~~ 377 (425)
T PRK05749 315 LLYAIADI-AFVGGSLVKRGGHNPLEPAAFGVPVISGPHTFNFKEIFERLLQA-GAAIQV---------------EDAED 377 (425)
T ss_pred HHHHhCCE-EEECCCcCCCCCCCHHHHHHhCCCEEECCCccCHHHHHHHHHHC-CCeEEE---------------CCHHH
Confidence 45666666 1331 134446999999999999999988888877776433 665553 26789
Q ss_pred HHHHHHHHhcCch-hHHHHHHHHHHHH
Q 044031 416 VEERVRELMMGSE-GKALRERSLEMRM 441 (468)
Q Consensus 416 l~~av~~~l~~~~-~~~~~~~a~~l~~ 441 (468)
+.+++.++++|++ .++|.++++++.+
T Consensus 378 La~~l~~ll~~~~~~~~m~~~a~~~~~ 404 (425)
T PRK05749 378 LAKAVTYLLTDPDARQAYGEAGVAFLK 404 (425)
T ss_pred HHHHHHHHhcCHHHHHHHHHHHHHHHH
Confidence 9999999999886 5667777766544
No 51
>cd03817 GT1_UGDG_like This family is most closely related to the GT1 family of glycosyltransferases. UDP-glucose-diacylglycerol glucosyltransferase (UGDG; also known as 1,2-diacylglycerol 3-glucosyltransferase) catalyzes the transfer of glucose from UDP-glucose to 1,2-diacylglycerol forming 3-D-glucosyl-1,2-diacylglycerol.
Probab=99.05 E-value=3.9e-07 Score=89.05 Aligned_cols=143 Identities=15% Similarity=0.149 Sum_probs=87.7
Q ss_pred eEEeccCCCcC-CCHHHHHHHHHHHHh--CCCcEEEEEeCCCCccccCCChhHHhh----ccCCCeEecCCCCHHh---h
Q 044031 272 VVFLCFGSRGT-FSAPQLKEIAIGLER--SNQRFLWVVRNPSNAAEAELPEGFLER----TKERGLVVKSWAPQST---I 341 (468)
Q Consensus 272 ~v~vs~GS~~~-~~~~~~~~~~~al~~--~~~~~l~~~~~~~~~~~~~~~~~~~~~----~~~~~~~v~~~~pq~~---i 341 (468)
.+++..|++.. ...+.+.+++..+.. .+..+++..++.. .+.+.+. -...++.+.+++|+.+ +
T Consensus 203 ~~i~~~G~~~~~k~~~~l~~~~~~~~~~~~~~~l~i~G~~~~-------~~~~~~~~~~~~~~~~v~~~g~~~~~~~~~~ 275 (374)
T cd03817 203 PVLLYVGRLAKEKNIDFLIRAFARLLKEEPDVKLVIVGDGPE-------REELEELARELGLADRVIFTGFVPREELPDY 275 (374)
T ss_pred eEEEEEeeeecccCHHHHHHHHHHHHHhCCCeEEEEEeCCch-------HHHHHHHHHHcCCCCcEEEeccCChHHHHHH
Confidence 56667787752 233444455555444 3455555433220 0112211 1245788889998765 5
Q ss_pred hCccCcceEEec----CCcchHHHHHHhCCcEEecccccchhhHHHHHHhhcceeeeeccCCcccccCCCCccccHHHHH
Q 044031 342 LGHESVGGFVTH----CGWSSVVEAVTYGVPMIAWPLYAEQFLNSVALVQEMKVAMPMFLNGEEETIGNGEGVVSAERVE 417 (468)
Q Consensus 342 l~~~~~~~~ith----gG~~s~~eal~~GvP~v~~P~~~DQ~~na~~~~~~~g~g~~~~~~~~~~~~~~~~~~~~~~~l~ 417 (468)
+.++++ +|.- +..+++.||+++|+|+|+... ...+..+.+. +.|..++. . +. ++.
T Consensus 276 ~~~ad~--~l~~s~~e~~~~~~~Ea~~~g~PvI~~~~----~~~~~~i~~~-~~g~~~~~--------~-----~~-~~~ 334 (374)
T cd03817 276 YKAADL--FVFASTTETQGLVLLEAMAAGLPVVAVDA----PGLPDLVADG-ENGFLFPP--------G-----DE-ALA 334 (374)
T ss_pred HHHcCE--EEecccccCcChHHHHHHHcCCcEEEeCC----CChhhheecC-ceeEEeCC--------C-----CH-HHH
Confidence 777887 5533 334689999999999999764 3344555433 67877763 1 22 899
Q ss_pred HHHHHHhcCch-hHHHHHHHHHHHHH
Q 044031 418 ERVRELMMGSE-GKALRERSLEMRMM 442 (468)
Q Consensus 418 ~av~~~l~~~~-~~~~~~~a~~l~~~ 442 (468)
+++.+++++++ .++|++++++..+.
T Consensus 335 ~~i~~l~~~~~~~~~~~~~~~~~~~~ 360 (374)
T cd03817 335 EALLRLLQDPELRRRLSKNAEESAEK 360 (374)
T ss_pred HHHHHHHhChHHHHHHHHHHHHHHHH
Confidence 99999999885 45566666655543
No 52
>cd03816 GT1_ALG1_like This family is most closely related to the GT1 family of glycosyltransferases. The yeast gene ALG1 has been shown to function as a mannosyltransferase that catalyzes the formation of dolichol pyrophosphate (Dol-PP)-GlcNAc2Man from GDP-Man and Dol-PP-Glc-NAc2, and participates in the formation of the lipid-linked precursor oligosaccharide for N-glycosylation. In humans ALG1 has been associated with the congenital disorders of glycosylation (CDG) designated as subtype CDG-Ik.
Probab=99.04 E-value=9e-07 Score=88.52 Aligned_cols=91 Identities=16% Similarity=0.276 Sum_probs=62.7
Q ss_pred CCeEec-CCCCHHh---hhCccCcceEEe-c---CC---cchHHHHHHhCCcEEecccccchhhHHHHHHhhcceeeeec
Q 044031 328 RGLVVK-SWAPQST---ILGHESVGGFVT-H---CG---WSSVVEAVTYGVPMIAWPLYAEQFLNSVALVQEMKVAMPMF 396 (468)
Q Consensus 328 ~~~~v~-~~~pq~~---il~~~~~~~~it-h---gG---~~s~~eal~~GvP~v~~P~~~DQ~~na~~~~~~~g~g~~~~ 396 (468)
.++++. +|+|..+ +|..+++ +|. + -| -++++||+++|+|+|+.... .....+. .-+.|+.+.
T Consensus 294 ~~~~~~~g~~~~~~~~~~l~~aDv--~v~~~~~~~~~~~p~~~~Eama~G~PVI~s~~~----~~~eiv~-~~~~G~lv~ 366 (415)
T cd03816 294 KKVTIRTPWLSAEDYPKLLASADL--GVSLHTSSSGLDLPMKVVDMFGCGLPVCALDFK----CIDELVK-HGENGLVFG 366 (415)
T ss_pred CcEEEEcCcCCHHHHHHHHHhCCE--EEEccccccccCCcHHHHHHHHcCCCEEEeCCC----CHHHHhc-CCCCEEEEC
Confidence 355543 6888555 4677777 553 1 12 34799999999999996542 3445554 326777663
Q ss_pred cCCcccccCCCCccccHHHHHHHHHHHhcC---ch-hHHHHHHHHHHH
Q 044031 397 LNGEEETIGNGEGVVSAERVEERVRELMMG---SE-GKALRERSLEMR 440 (468)
Q Consensus 397 ~~~~~~~~~~~~~~~~~~~l~~av~~~l~~---~~-~~~~~~~a~~l~ 440 (468)
+.+++++++.++++| ++ .++|++++++..
T Consensus 367 ---------------d~~~la~~i~~ll~~~~~~~~~~~m~~~~~~~~ 399 (415)
T cd03816 367 ---------------DSEELAEQLIDLLSNFPNRGKLNSLKKGAQEES 399 (415)
T ss_pred ---------------CHHHHHHHHHHHHhcCCCHHHHHHHHHHHHHhh
Confidence 568999999999998 65 677888877765
No 53
>PRK10307 putative glycosyl transferase; Provisional
Probab=99.02 E-value=1.2e-06 Score=87.73 Aligned_cols=143 Identities=12% Similarity=0.060 Sum_probs=88.0
Q ss_pred eEEeccCCCcCCCHHHHHHHHHHHHhC----CCcEEEEEeCCCCccccCCChhHH---hhccCCCeEecCCCCHHh---h
Q 044031 272 VVFLCFGSRGTFSAPQLKEIAIGLERS----NQRFLWVVRNPSNAAEAELPEGFL---ERTKERGLVVKSWAPQST---I 341 (468)
Q Consensus 272 ~v~vs~GS~~~~~~~~~~~~~~al~~~----~~~~l~~~~~~~~~~~~~~~~~~~---~~~~~~~~~v~~~~pq~~---i 341 (468)
.+++..|++.. .+.+..++++++.. +.+++ .+|.+. ..+.+. +...-.++.+.+|+|+.+ +
T Consensus 230 ~~i~~~G~l~~--~kg~~~li~a~~~l~~~~~~~l~-ivG~g~------~~~~l~~~~~~~~l~~v~f~G~~~~~~~~~~ 300 (412)
T PRK10307 230 KIVLYSGNIGE--KQGLELVIDAARRLRDRPDLIFV-ICGQGG------GKARLEKMAQCRGLPNVHFLPLQPYDRLPAL 300 (412)
T ss_pred EEEEEcCcccc--ccCHHHHHHHHHHhccCCCeEEE-EECCCh------hHHHHHHHHHHcCCCceEEeCCCCHHHHHHH
Confidence 56666788852 22344445554432 34554 445431 112222 112224788889998754 6
Q ss_pred hCccCcceEEecCCc------chHHHHHHhCCcEEecccccchhhHHHHHHhhcceeeeeccCCcccccCCCCccccHHH
Q 044031 342 LGHESVGGFVTHCGW------SSVVEAVTYGVPMIAWPLYAEQFLNSVALVQEMKVAMPMFLNGEEETIGNGEGVVSAER 415 (468)
Q Consensus 342 l~~~~~~~~ithgG~------~s~~eal~~GvP~v~~P~~~DQ~~na~~~~~~~g~g~~~~~~~~~~~~~~~~~~~~~~~ 415 (468)
+..+++.++.+..+. +.+.|++++|+|+|+....+.. ....+ + +.|+.++. -+.++
T Consensus 301 ~~~aDi~v~ps~~e~~~~~~p~kl~eama~G~PVi~s~~~g~~--~~~~i-~--~~G~~~~~-------------~d~~~ 362 (412)
T PRK10307 301 LKMADCHLLPQKAGAADLVLPSKLTNMLASGRNVVATAEPGTE--LGQLV-E--GIGVCVEP-------------ESVEA 362 (412)
T ss_pred HHhcCEeEEeeccCcccccCcHHHHHHHHcCCCEEEEeCCCch--HHHHH-h--CCcEEeCC-------------CCHHH
Confidence 888888666666443 2368999999999998754321 11233 2 67887764 47889
Q ss_pred HHHHHHHHhcCch-hHHHHHHHHHHHH
Q 044031 416 VEERVRELMMGSE-GKALRERSLEMRM 441 (468)
Q Consensus 416 l~~av~~~l~~~~-~~~~~~~a~~l~~ 441 (468)
++++|.++++|++ .+.|++++++..+
T Consensus 363 la~~i~~l~~~~~~~~~~~~~a~~~~~ 389 (412)
T PRK10307 363 LVAAIAALARQALLRPKLGTVAREYAE 389 (412)
T ss_pred HHHHHHHHHhCHHHHHHHHHHHHHHHH
Confidence 9999999998875 5667777766543
No 54
>cd04962 GT1_like_5 This family is most closely related to the GT1 family of glycosyltransferases. Glycosyltransferases catalyze the transfer of sugar moieties from activated donor molecules to specific acceptor molecules, forming glycosidic bonds. The acceptor molecule can be a lipid, a protein, a heterocyclic compound, or another carbohydrate residue. This group of glycosyltransferases is most closely related to the previously defined glycosyltransferase family 1 (GT1). The members of this family may transfer UDP, ADP, GDP, or CMP linked sugars. The diverse enzymatic activities among members of this family reflect a wide range of biological functions. The protein structure available for this family has the GTB topology, one of the two protein topologies observed for nucleotide-sugar-dependent glycosyltransferases. GTB proteins have distinct N- and C- terminal domains each containing a typical Rossmann fold. The two domains have high structural homology despite minimal sequence homolog
Probab=99.01 E-value=5.3e-07 Score=88.66 Aligned_cols=92 Identities=13% Similarity=0.101 Sum_probs=64.6
Q ss_pred CCeEecCCCCH-HhhhCccCcceEEe----cCCcchHHHHHHhCCcEEecccccchhhHHHHHHhhcceeeeeccCCccc
Q 044031 328 RGLVVKSWAPQ-STILGHESVGGFVT----HCGWSSVVEAVTYGVPMIAWPLYAEQFLNSVALVQEMKVAMPMFLNGEEE 402 (468)
Q Consensus 328 ~~~~v~~~~pq-~~il~~~~~~~~it----hgG~~s~~eal~~GvP~v~~P~~~DQ~~na~~~~~~~g~g~~~~~~~~~~ 402 (468)
.++.+.++.++ ..++..+++ +|. -+...++.||+++|+|+|+... ...+..+.+. ..|...+.
T Consensus 253 ~~v~~~g~~~~~~~~~~~~d~--~v~ps~~E~~~~~~~EAma~g~PvI~s~~----~~~~e~i~~~-~~G~~~~~----- 320 (371)
T cd04962 253 DDVLFLGKQDHVEELLSIADL--FLLPSEKESFGLAALEAMACGVPVVASNA----GGIPEVVKHG-ETGFLVDV----- 320 (371)
T ss_pred ceEEEecCcccHHHHHHhcCE--EEeCCCcCCCccHHHHHHHcCCCEEEeCC----CCchhhhcCC-CceEEcCC-----
Confidence 45777677764 456777777 552 2335699999999999999654 3455555432 56776663
Q ss_pred ccCCCCccccHHHHHHHHHHHhcCch-hHHHHHHHHHH
Q 044031 403 TIGNGEGVVSAERVEERVRELMMGSE-GKALRERSLEM 439 (468)
Q Consensus 403 ~~~~~~~~~~~~~l~~av~~~l~~~~-~~~~~~~a~~l 439 (468)
-+.+++.+++.++++|++ ..+|++++++.
T Consensus 321 --------~~~~~l~~~i~~l~~~~~~~~~~~~~~~~~ 350 (371)
T cd04962 321 --------GDVEAMAEYALSLLEDDELWQEFSRAARNR 350 (371)
T ss_pred --------CCHHHHHHHHHHHHhCHHHHHHHHHHHHHH
Confidence 377899999999999875 46677776665
No 55
>cd03808 GT1_cap1E_like This family is most closely related to the GT1 family of glycosyltransferases. cap1E in Streptococcus pneumoniae is required for the synthesis of type 1 capsular polysaccharides.
Probab=98.93 E-value=2.6e-06 Score=82.49 Aligned_cols=147 Identities=18% Similarity=0.130 Sum_probs=86.2
Q ss_pred CceEEeccCCCcC-CCHHHHHHHHHHHHh--CCCcEEEEEeCCCCccccCCChh-HHhhccCCCeEecCCCC-HHhhhCc
Q 044031 270 GSVVFLCFGSRGT-FSAPQLKEIAIGLER--SNQRFLWVVRNPSNAAEAELPEG-FLERTKERGLVVKSWAP-QSTILGH 344 (468)
Q Consensus 270 ~~~v~vs~GS~~~-~~~~~~~~~~~al~~--~~~~~l~~~~~~~~~~~~~~~~~-~~~~~~~~~~~v~~~~p-q~~il~~ 344 (468)
+..+++..|++.. ...+.+.+.+..+.. .+.++++..+.... ...... ........++.+.++.. -..++..
T Consensus 187 ~~~~i~~~G~~~~~k~~~~li~~~~~l~~~~~~~~l~i~G~~~~~---~~~~~~~~~~~~~~~~v~~~g~~~~~~~~~~~ 263 (359)
T cd03808 187 DDPVFLFVARLLKDKGIDELLEAARILKAKGPNVRLLLVGDGDEE---NPAAILEIEKLGLEGRVEFLGFRDDVPELLAA 263 (359)
T ss_pred CCcEEEEEeccccccCHHHHHHHHHHHHhcCCCeEEEEEcCCCcc---hhhHHHHHHhcCCcceEEEeeccccHHHHHHh
Confidence 3477777888752 233444555555543 34555544333211 000000 11111235666666643 3457777
Q ss_pred cCcceEEecCC----cchHHHHHHhCCcEEecccccchhhHHHHHHhhcceeeeeccCCcccccCCCCccccHHHHHHHH
Q 044031 345 ESVGGFVTHCG----WSSVVEAVTYGVPMIAWPLYAEQFLNSVALVQEMKVAMPMFLNGEEETIGNGEGVVSAERVEERV 420 (468)
Q Consensus 345 ~~~~~~ithgG----~~s~~eal~~GvP~v~~P~~~DQ~~na~~~~~~~g~g~~~~~~~~~~~~~~~~~~~~~~~l~~av 420 (468)
+++ +|.-.. .+++.||+++|+|+|+-+..+ +...+.+. +.|..++. -+.+++.+++
T Consensus 264 adi--~i~ps~~e~~~~~~~Ea~~~G~Pvi~s~~~~----~~~~i~~~-~~g~~~~~-------------~~~~~~~~~i 323 (359)
T cd03808 264 ADV--FVLPSYREGLPRVLLEAMAMGRPVIATDVPG----CREAVIDG-VNGFLVPP-------------GDAEALADAI 323 (359)
T ss_pred ccE--EEecCcccCcchHHHHHHHcCCCEEEecCCC----chhhhhcC-cceEEECC-------------CCHHHHHHHH
Confidence 777 664332 578999999999999976543 33445333 67877763 3688999999
Q ss_pred HHHhcCch-hHHHHHHHHHH
Q 044031 421 RELMMGSE-GKALRERSLEM 439 (468)
Q Consensus 421 ~~~l~~~~-~~~~~~~a~~l 439 (468)
.+++.|++ .+++.+++++.
T Consensus 324 ~~l~~~~~~~~~~~~~~~~~ 343 (359)
T cd03808 324 ERLIEDPELRARMGQAARKR 343 (359)
T ss_pred HHHHhCHHHHHHHHHHHHHH
Confidence 99999885 45555555554
No 56
>cd03795 GT1_like_4 This family is most closely related to the GT1 family of glycosyltransferases. Glycosyltransferases catalyze the transfer of sugar moieties from activated donor molecules to specific acceptor molecules, forming glycosidic bonds. The acceptor molecule can be a lipid, a protein, a heterocyclic compound, or another carbohydrate residue. This group of glycosyltransferases is most closely related to the previously defined glycosyltransferase family 1 (GT1). The members of this family may transfer UDP, ADP, GDP, or CMP-linked sugars. The diverse enzymatic activities among members of this family reflect a wide range of biological functions. The protein structure available for this family has the GTB topology, one of the two protein topologies observed for nucleotide-sugar-dependent glycosyltransferases. GTB proteins have distinct N- and C- terminal domains each containing a typical Rossmann fold. The two domains have high structural homology despite minimal sequence homolog
Probab=98.93 E-value=1.2e-06 Score=85.57 Aligned_cols=144 Identities=15% Similarity=0.077 Sum_probs=92.4
Q ss_pred eEEeccCCCcCCCHHHHHHHHHHHHhCC-CcEEEEEeCCCCccccCCChhHHh----hccCCCeEecCCCCHHh---hhC
Q 044031 272 VVFLCFGSRGTFSAPQLKEIAIGLERSN-QRFLWVVRNPSNAAEAELPEGFLE----RTKERGLVVKSWAPQST---ILG 343 (468)
Q Consensus 272 ~v~vs~GS~~~~~~~~~~~~~~al~~~~-~~~l~~~~~~~~~~~~~~~~~~~~----~~~~~~~~v~~~~pq~~---il~ 343 (468)
.+++..|+.. ..+.+..++++++... ..+++. |... ..+.+.+ .-..+++.+.+|+|+.+ ++.
T Consensus 192 ~~i~~~G~~~--~~K~~~~li~a~~~l~~~~l~i~-G~g~------~~~~~~~~~~~~~~~~~V~~~g~v~~~~~~~~~~ 262 (357)
T cd03795 192 PFFLFVGRLV--YYKGLDVLLEAAAALPDAPLVIV-GEGP------LEAELEALAAALGLLDRVRFLGRLDDEEKAALLA 262 (357)
T ss_pred cEEEEecccc--cccCHHHHHHHHHhccCcEEEEE-eCCh------hHHHHHHHHHhcCCcceEEEcCCCCHHHHHHHHH
Confidence 5667778774 2233555667776655 554444 4321 1111211 12356899999999754 666
Q ss_pred ccCcceEEec---CC-cchHHHHHHhCCcEEecccccchhhHHHHHHhhcceeeeeccCCcccccCCCCccccHHHHHHH
Q 044031 344 HESVGGFVTH---CG-WSSVVEAVTYGVPMIAWPLYAEQFLNSVALVQEMKVAMPMFLNGEEETIGNGEGVVSAERVEER 419 (468)
Q Consensus 344 ~~~~~~~ith---gG-~~s~~eal~~GvP~v~~P~~~DQ~~na~~~~~~~g~g~~~~~~~~~~~~~~~~~~~~~~~l~~a 419 (468)
.+++.++.++ -| ..++.||+++|+|+|+....+....... +. +.|...+. -+.+++.++
T Consensus 263 ~ad~~i~ps~~~~e~~g~~~~Ea~~~g~Pvi~~~~~~~~~~i~~---~~-~~g~~~~~-------------~d~~~~~~~ 325 (357)
T cd03795 263 ACDVFVFPSVERSEAFGIVLLEAMAFGKPVISTEIGTGGSYVNL---HG-VTGLVVPP-------------GDPAALAEA 325 (357)
T ss_pred hCCEEEeCCcccccccchHHHHHHHcCCCEEecCCCCchhHHhh---CC-CceEEeCC-------------CCHHHHHHH
Confidence 7777444342 34 3479999999999999776555443322 13 67777763 478899999
Q ss_pred HHHHhcCch-hHHHHHHHHHHHH
Q 044031 420 VRELMMGSE-GKALRERSLEMRM 441 (468)
Q Consensus 420 v~~~l~~~~-~~~~~~~a~~l~~ 441 (468)
|.++++|++ .++|++++++..+
T Consensus 326 i~~l~~~~~~~~~~~~~~~~~~~ 348 (357)
T cd03795 326 IRRLLEDPELRERLGEAARERAE 348 (357)
T ss_pred HHHHHHCHHHHHHHHHHHHHHHH
Confidence 999999986 6777777766554
No 57
>cd03818 GT1_ExpC_like This family is most closely related to the GT1 family of glycosyltransferases. ExpC in Rhizobium meliloti has been shown to be involved in the biosynthesis of galactoglucan (exopolysaccharide II).
Probab=98.92 E-value=4e-06 Score=83.41 Aligned_cols=97 Identities=13% Similarity=0.106 Sum_probs=67.0
Q ss_pred CCCeEecCCCCHHh---hhCccCcceEEec-CC-cchHHHHHHhCCcEEecccccchhhHHHHHHhhcceeeeeccCCcc
Q 044031 327 ERGLVVKSWAPQST---ILGHESVGGFVTH-CG-WSSVVEAVTYGVPMIAWPLYAEQFLNSVALVQEMKVAMPMFLNGEE 401 (468)
Q Consensus 327 ~~~~~v~~~~pq~~---il~~~~~~~~ith-gG-~~s~~eal~~GvP~v~~P~~~DQ~~na~~~~~~~g~g~~~~~~~~~ 401 (468)
..++.+.+++|+.+ ++..+++-++.+. .| ..++.||+++|+|+|+... ......+.+. ..|..++.
T Consensus 280 ~~~V~f~G~v~~~~~~~~l~~adv~v~~s~~e~~~~~llEAmA~G~PVIas~~----~g~~e~i~~~-~~G~lv~~---- 350 (396)
T cd03818 280 LSRVHFLGRVPYDQYLALLQVSDVHVYLTYPFVLSWSLLEAMACGCLVVGSDT----APVREVITDG-ENGLLVDF---- 350 (396)
T ss_pred cceEEEeCCCCHHHHHHHHHhCcEEEEcCcccccchHHHHHHHCCCCEEEcCC----CCchhhcccC-CceEEcCC----
Confidence 45788889999765 5667777333333 22 2489999999999998654 3444555332 46777763
Q ss_pred cccCCCCccccHHHHHHHHHHHhcCch-hHHHHHHHHHHHH
Q 044031 402 ETIGNGEGVVSAERVEERVRELMMGSE-GKALRERSLEMRM 441 (468)
Q Consensus 402 ~~~~~~~~~~~~~~l~~av~~~l~~~~-~~~~~~~a~~l~~ 441 (468)
-+.+++.++|.++++|++ .++|.+++++..+
T Consensus 351 ---------~d~~~la~~i~~ll~~~~~~~~l~~~ar~~~~ 382 (396)
T cd03818 351 ---------FDPDALAAAVIELLDDPARRARLRRAARRTAL 382 (396)
T ss_pred ---------CCHHHHHHHHHHHHhCHHHHHHHHHHHHHHHH
Confidence 478999999999999885 4666666665443
No 58
>cd03801 GT1_YqgM_like This family is most closely related to the GT1 family of glycosyltransferases and named after YqgM in Bacillus licheniformis about which little is known. Glycosyltransferases catalyze the transfer of sugar moieties from activated donor molecules to specific acceptor molecules, forming glycosidic bonds. The acceptor molecule can be a lipid, a protein, a heterocyclic compound, or another carbohydrate residue. This group of glycosyltransferases is most closely related to the previously defined glycosyltransferase family 1 (GT1). The members of this family may transfer UDP, ADP, GDP, or CMP linked sugars. The diverse enzymatic activities among members of this family reflect a wide range of biological functions. The protein structure available for this family has the GTB topology, one of the two protein topologies observed for nucleotide-sugar-dependent glycosyltransferases. GTB proteins have distinct N- and C- terminal domains each containing a typical Rossmann fold.
Probab=98.89 E-value=5.1e-06 Score=80.58 Aligned_cols=92 Identities=16% Similarity=0.165 Sum_probs=65.5
Q ss_pred cCCCeEecCCCCHHh---hhCccCcceEEe----cCCcchHHHHHHhCCcEEecccccchhhHHHHHHhhcceeeeeccC
Q 044031 326 KERGLVVKSWAPQST---ILGHESVGGFVT----HCGWSSVVEAVTYGVPMIAWPLYAEQFLNSVALVQEMKVAMPMFLN 398 (468)
Q Consensus 326 ~~~~~~v~~~~pq~~---il~~~~~~~~it----hgG~~s~~eal~~GvP~v~~P~~~DQ~~na~~~~~~~g~g~~~~~~ 398 (468)
...++.+.+++++.+ ++..+++ +|. -+..+++.||+++|+|+|+.+. ..+...+.+. +.|+..+.
T Consensus 254 ~~~~v~~~g~~~~~~~~~~~~~~di--~i~~~~~~~~~~~~~Ea~~~g~pvI~~~~----~~~~~~~~~~-~~g~~~~~- 325 (374)
T cd03801 254 LGDRVTFLGFVPDEDLPALYAAADV--FVLPSLYEGFGLVLLEAMAAGLPVVASDV----GGIPEVVEDG-ETGLLVPP- 325 (374)
T ss_pred CCcceEEEeccChhhHHHHHHhcCE--EEecchhccccchHHHHHHcCCcEEEeCC----CChhHHhcCC-cceEEeCC-
Confidence 356788889997544 6777777 552 2456799999999999999776 3345555433 77887763
Q ss_pred CcccccCCCCccccHHHHHHHHHHHhcCch-hHHHHHHHH
Q 044031 399 GEEETIGNGEGVVSAERVEERVRELMMGSE-GKALRERSL 437 (468)
Q Consensus 399 ~~~~~~~~~~~~~~~~~l~~av~~~l~~~~-~~~~~~~a~ 437 (468)
.+.+++.+++.++++|++ .+++.++++
T Consensus 326 ------------~~~~~l~~~i~~~~~~~~~~~~~~~~~~ 353 (374)
T cd03801 326 ------------GDPEALAEAILRLLDDPELRRRLGEAAR 353 (374)
T ss_pred ------------CCHHHHHHHHHHHHcChHHHHHHHHHHH
Confidence 468999999999999884 344444443
No 59
>TIGR00236 wecB UDP-N-acetylglucosamine 2-epimerase. Epimerase activity was also demonstrated in a bifunctional rat enzyme, for which the N-terminal domain appears to be orthologous. The set of proteins found above the suggested cutoff includes E. coli WecB in one of two deeply branched clusters and the rat UDP-N-acetylglucosamine 2-epimerase domain in the other.
Probab=98.87 E-value=5.5e-07 Score=88.56 Aligned_cols=156 Identities=12% Similarity=0.161 Sum_probs=90.3
Q ss_pred ceEEeccCCCcCCCHHHHHHHHHHHHhC-----CCcEEEEEeCCCCccccCCChhHHhhc-cCCCeEecCCCCHH---hh
Q 044031 271 SVVFLCFGSRGTFSAPQLKEIAIGLERS-----NQRFLWVVRNPSNAAEAELPEGFLERT-KERGLVVKSWAPQS---TI 341 (468)
Q Consensus 271 ~~v~vs~GS~~~~~~~~~~~~~~al~~~-----~~~~l~~~~~~~~~~~~~~~~~~~~~~-~~~~~~v~~~~pq~---~i 341 (468)
..|+++++-.... .+.+..++++++.. +.++++..+.+.+ .-..+.+.. ..+++.+.+.+++. .+
T Consensus 198 ~~vl~~~hr~~~~-~k~~~~ll~a~~~l~~~~~~~~~vi~~~~~~~-----~~~~~~~~~~~~~~v~~~~~~~~~~~~~~ 271 (365)
T TIGR00236 198 RYILLTLHRRENV-GEPLENIFKAIREIVEEFEDVQIVYPVHLNPV-----VREPLHKHLGDSKRVHLIEPLEYLDFLNL 271 (365)
T ss_pred CEEEEecCchhhh-hhHHHHHHHHHHHHHHHCCCCEEEEECCCChH-----HHHHHHHHhCCCCCEEEECCCChHHHHHH
Confidence 3666655432211 13355566666542 4566665443311 111121211 23467777766654 45
Q ss_pred hCccCcceEEecCCcchHHHHHHhCCcEEecccccchhhHHHHHHhhcceeeeeccCCcccccCCCCccccHHHHHHHHH
Q 044031 342 LGHESVGGFVTHCGWSSVVEAVTYGVPMIAWPLYAEQFLNSVALVQEMKVAMPMFLNGEEETIGNGEGVVSAERVEERVR 421 (468)
Q Consensus 342 l~~~~~~~~ithgG~~s~~eal~~GvP~v~~P~~~DQ~~na~~~~~~~g~g~~~~~~~~~~~~~~~~~~~~~~~l~~av~ 421 (468)
+.++++ +|+-.|. .+.||+++|+|+|..+..++++. .+ +. |.++.+. -+.++|.+++.
T Consensus 272 l~~ad~--vv~~Sg~-~~~EA~a~g~PvI~~~~~~~~~e---~~-~~-g~~~lv~--------------~d~~~i~~ai~ 329 (365)
T TIGR00236 272 AANSHL--ILTDSGG-VQEEAPSLGKPVLVLRDTTERPE---TV-EA-GTNKLVG--------------TDKENITKAAK 329 (365)
T ss_pred HHhCCE--EEECChh-HHHHHHHcCCCEEECCCCCCChH---HH-hc-CceEEeC--------------CCHHHHHHHHH
Confidence 666666 8987764 47999999999999976666553 22 33 7776554 47789999999
Q ss_pred HHhcCchhHHHHHHHHHHHHHHHHhhcCCCCCChHHHHHHHH
Q 044031 422 ELMMGSEGKALRERSLEMRMMAATAWNNNDGGSSFTAFSNLF 463 (468)
Q Consensus 422 ~~l~~~~~~~~~~~a~~l~~~~~~a~~~~~~g~~~~~~~~~~ 463 (468)
++++|+ ..+++...-. .... +++++.+.++.+.
T Consensus 330 ~ll~~~---~~~~~~~~~~----~~~g--~~~a~~ri~~~l~ 362 (365)
T TIGR00236 330 RLLTDP---DEYKKMSNAS----NPYG--DGEASERIVEELL 362 (365)
T ss_pred HHHhCh---HHHHHhhhcC----CCCc--CchHHHHHHHHHH
Confidence 999887 4444432211 2233 5556655555443
No 60
>TIGR03449 mycothiol_MshA UDP-N-acetylglucosamine: 1L-myo-inositol-1-phosphate 1-alpha-D-N-acetylglucosaminyltransferase. Members of this protein family, found exclusively in the Actinobacteria, are MshA, the glycosyltransferase of mycothiol biosynthesis. Mycothiol replaces glutathione in these species.
Probab=98.86 E-value=3.4e-06 Score=84.18 Aligned_cols=94 Identities=12% Similarity=0.082 Sum_probs=67.3
Q ss_pred CCCeEecCCCCHH---hhhCccCcceEEe---cCC-cchHHHHHHhCCcEEecccccchhhHHHHHHhhcceeeeeccCC
Q 044031 327 ERGLVVKSWAPQS---TILGHESVGGFVT---HCG-WSSVVEAVTYGVPMIAWPLYAEQFLNSVALVQEMKVAMPMFLNG 399 (468)
Q Consensus 327 ~~~~~v~~~~pq~---~il~~~~~~~~it---hgG-~~s~~eal~~GvP~v~~P~~~DQ~~na~~~~~~~g~g~~~~~~~ 399 (468)
.+++.+.+++++. .++..+++ +|. +-| ..++.||+++|+|+|+....+ ....+. .-+.|+.++.
T Consensus 282 ~~~v~~~g~~~~~~~~~~l~~ad~--~v~ps~~E~~g~~~lEAma~G~Pvi~~~~~~----~~e~i~-~~~~g~~~~~-- 352 (405)
T TIGR03449 282 ADRVRFLPPRPPEELVHVYRAADV--VAVPSYNESFGLVAMEAQACGTPVVAARVGG----LPVAVA-DGETGLLVDG-- 352 (405)
T ss_pred CceEEECCCCCHHHHHHHHHhCCE--EEECCCCCCcChHHHHHHHcCCCEEEecCCC----cHhhhc-cCCceEECCC--
Confidence 3578888999865 46888887 553 223 358999999999999976533 334453 3267777763
Q ss_pred cccccCCCCccccHHHHHHHHHHHhcCch-hHHHHHHHHHHH
Q 044031 400 EEETIGNGEGVVSAERVEERVRELMMGSE-GKALRERSLEMR 440 (468)
Q Consensus 400 ~~~~~~~~~~~~~~~~l~~av~~~l~~~~-~~~~~~~a~~l~ 440 (468)
-+.+++.++|.+++++++ .++|++++++..
T Consensus 353 -----------~d~~~la~~i~~~l~~~~~~~~~~~~~~~~~ 383 (405)
T TIGR03449 353 -----------HDPADWADALARLLDDPRTRIRMGAAAVEHA 383 (405)
T ss_pred -----------CCHHHHHHHHHHHHhCHHHHHHHHHHHHHHH
Confidence 478899999999999875 566777766544
No 61
>cd03825 GT1_wcfI_like This family is most closely related to the GT1 family of glycosyltransferases. wcfI in Bacteroides fragilis has been shown to be involved in the capsular polysaccharide biosynthesis.
Probab=98.86 E-value=7.9e-06 Score=79.96 Aligned_cols=93 Identities=16% Similarity=0.135 Sum_probs=63.8
Q ss_pred CCCeEecCCCC-HH---hhhCccCcceEEecC----CcchHHHHHHhCCcEEecccccchhhHHHHHHhhcceeeeeccC
Q 044031 327 ERGLVVKSWAP-QS---TILGHESVGGFVTHC----GWSSVVEAVTYGVPMIAWPLYAEQFLNSVALVQEMKVAMPMFLN 398 (468)
Q Consensus 327 ~~~~~v~~~~p-q~---~il~~~~~~~~ithg----G~~s~~eal~~GvP~v~~P~~~DQ~~na~~~~~~~g~g~~~~~~ 398 (468)
..++.+.+|++ +. .++..+++ +|.-. ..+++.||+++|+|+|+....+ ....+.+. +.|..++.
T Consensus 243 ~~~v~~~g~~~~~~~~~~~~~~ad~--~l~ps~~e~~g~~~~Eam~~g~PvI~~~~~~----~~e~~~~~-~~g~~~~~- 314 (365)
T cd03825 243 PFPVHYLGSLNDDESLALIYSAADV--FVVPSLQENFPNTAIEALACGTPVVAFDVGG----IPDIVDHG-VTGYLAKP- 314 (365)
T ss_pred CCceEecCCcCCHHHHHHHHHhCCE--EEeccccccccHHHHHHHhcCCCEEEecCCC----ChhheeCC-CceEEeCC-
Confidence 34677779998 44 35777777 76643 3579999999999999876532 22334322 56777763
Q ss_pred CcccccCCCCccccHHHHHHHHHHHhcCch-hHHHHHHHHHH
Q 044031 399 GEEETIGNGEGVVSAERVEERVRELMMGSE-GKALRERSLEM 439 (468)
Q Consensus 399 ~~~~~~~~~~~~~~~~~l~~av~~~l~~~~-~~~~~~~a~~l 439 (468)
.+.+++.+++.++++|++ ..++.+++++.
T Consensus 315 ------------~~~~~~~~~l~~l~~~~~~~~~~~~~~~~~ 344 (365)
T cd03825 315 ------------GDPEDLAEGIEWLLADPDEREELGEAAREL 344 (365)
T ss_pred ------------CCHHHHHHHHHHHHhCHHHHHHHHHHHHHH
Confidence 478899999999999885 44555555443
No 62
>cd03820 GT1_amsD_like This family is most closely related to the GT1 family of glycosyltransferases. AmSD in Erwinia amylovora has been shown to be involved in the biosynthesis of amylovoran, the acidic exopolysaccharide acting as a virulence factor. This enzyme may be responsible for the formation of galactose alpha-1,6 linkages in amylovoran.
Probab=98.85 E-value=2.7e-06 Score=82.00 Aligned_cols=148 Identities=16% Similarity=0.139 Sum_probs=83.8
Q ss_pred eEEeccCCCcC-CCHHHHHHHHHHHHh--CCCcEEEEEeCCCCccccCCChhHHhhccCCCeEecCCCC-HHhhhCccCc
Q 044031 272 VVFLCFGSRGT-FSAPQLKEIAIGLER--SNQRFLWVVRNPSNAAEAELPEGFLERTKERGLVVKSWAP-QSTILGHESV 347 (468)
Q Consensus 272 ~v~vs~GS~~~-~~~~~~~~~~~al~~--~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~p-q~~il~~~~~ 347 (468)
.+++.+|+... ...+.+.+++..+.. .+.++++ +|...+ ...+.......-...++.+.++.. -..++..+++
T Consensus 179 ~~i~~~g~~~~~K~~~~l~~~~~~l~~~~~~~~l~i-~G~~~~--~~~~~~~~~~~~~~~~v~~~g~~~~~~~~~~~ad~ 255 (348)
T cd03820 179 KRILAVGRLVPQKGFDLLIEAWAKIAKKHPDWKLRI-VGDGPE--REALEALIKELGLEDRVILLGFTKNIEEYYAKASI 255 (348)
T ss_pred cEEEEEEeeccccCHHHHHHHHHHHHhcCCCeEEEE-EeCCCC--HHHHHHHHHHcCCCCeEEEcCCcchHHHHHHhCCE
Confidence 55666677653 233444444444442 2345444 443311 000100011111234566666633 3457777777
Q ss_pred ceEEecC----CcchHHHHHHhCCcEEecccccchhhHHHHHHhhcceeeeeccCCcccccCCCCccccHHHHHHHHHHH
Q 044031 348 GGFVTHC----GWSSVVEAVTYGVPMIAWPLYAEQFLNSVALVQEMKVAMPMFLNGEEETIGNGEGVVSAERVEERVREL 423 (468)
Q Consensus 348 ~~~ithg----G~~s~~eal~~GvP~v~~P~~~DQ~~na~~~~~~~g~g~~~~~~~~~~~~~~~~~~~~~~~l~~av~~~ 423 (468)
+|.-. ..+++.||+++|+|+|+.+..+.+.. +.+....|...+. .+.+++.+++.++
T Consensus 256 --~i~ps~~e~~~~~~~Ea~a~G~Pvi~~~~~~~~~~----~~~~~~~g~~~~~-------------~~~~~~~~~i~~l 316 (348)
T cd03820 256 --FVLTSRFEGFPMVLLEAMAFGLPVISFDCPTGPSE----IIEDGVNGLLVPN-------------GDVEALAEALLRL 316 (348)
T ss_pred --EEeCccccccCHHHHHHHHcCCCEEEecCCCchHh----hhccCcceEEeCC-------------CCHHHHHHHHHHH
Confidence 55443 24689999999999999765544332 3234137877763 4678999999999
Q ss_pred hcCch-hHHHHHHHHHHHH
Q 044031 424 MMGSE-GKALRERSLEMRM 441 (468)
Q Consensus 424 l~~~~-~~~~~~~a~~l~~ 441 (468)
++|++ .+.+++++++..+
T Consensus 317 l~~~~~~~~~~~~~~~~~~ 335 (348)
T cd03820 317 MEDEELRKRMGANARESAE 335 (348)
T ss_pred HcCHHHHHHHHHHHHHHHH
Confidence 99985 4566666654443
No 63
>cd03786 GT1_UDP-GlcNAc_2-Epimerase Bacterial members of the UDP-N-Acetylglucosamine (GlcNAc) 2-Epimerase family are known to catalyze the reversible interconversion of UDP-GlcNAc and UDP-N-acetylmannosamine (UDP-ManNAc). The enzyme serves to produce an activated form of ManNAc residues (UDP-ManNAc) for use in the biosynthesis of a variety of cell surface polysaccharides; The mammalian enzyme is bifunctional, catalyzing both the inversion of stereochemistry at C-2 and the hydrolysis of the UDP-sugar linkage to generate free ManNAc. It also catalyzes the phosphorylation of ManNAc to generate ManNAc 6-phosphate, a precursor to salic acids. In mammals, sialic acids are found at the termini of oligosaccharides in a large variety of cell surface glycoconjugates and are key mediators of cell-cell recognition events. Mutations in human members of this family have been associated with Sialuria, a rare disease caused by the disorders of sialic acid metabolism. This family belongs to the GT-B st
Probab=98.77 E-value=1.5e-06 Score=85.34 Aligned_cols=132 Identities=15% Similarity=0.120 Sum_probs=81.3
Q ss_pred CCceEEeccCCCcCC-CHHHHHHHHHHHHhCCC-cEEEEEeCCCCccccCCChhHHh---hcc--CCCeEecCCCCHH--
Q 044031 269 SGSVVFLCFGSRGTF-SAPQLKEIAIGLERSNQ-RFLWVVRNPSNAAEAELPEGFLE---RTK--ERGLVVKSWAPQS-- 339 (468)
Q Consensus 269 ~~~~v~vs~GS~~~~-~~~~~~~~~~al~~~~~-~~l~~~~~~~~~~~~~~~~~~~~---~~~--~~~~~v~~~~pq~-- 339 (468)
+++.|++.+|..... ..+.+..++++++.... .+.++...... .-+.+.+ ... ..++.+.+..++.
T Consensus 197 ~~~~vlv~~~r~~~~~~~k~~~~l~~al~~l~~~~~~vi~~~~~~-----~~~~l~~~~~~~~~~~~~v~~~~~~~~~~~ 271 (363)
T cd03786 197 PKKYILVTLHRVENVDDGEQLEEILEALAELAEEDVPVVFPNHPR-----TRPRIREAGLEFLGHHPNVLLISPLGYLYF 271 (363)
T ss_pred CCCEEEEEeCCccccCChHHHHHHHHHHHHHHhcCCEEEEECCCC-----hHHHHHHHHHhhccCCCCEEEECCcCHHHH
Confidence 344788888877643 34557778888776432 23333322200 0012221 111 3567666655544
Q ss_pred -hhhCccCcceEEecCCcchHHHHHHhCCcEEecccccchhhHHHHHHhhcceeeeeccCCcccccCCCCccccHHHHHH
Q 044031 340 -TILGHESVGGFVTHCGWSSVVEAVTYGVPMIAWPLYAEQFLNSVALVQEMKVAMPMFLNGEEETIGNGEGVVSAERVEE 418 (468)
Q Consensus 340 -~il~~~~~~~~ithgG~~s~~eal~~GvP~v~~P~~~DQ~~na~~~~~~~g~g~~~~~~~~~~~~~~~~~~~~~~~l~~ 418 (468)
.++..+++ ||+..| |.+.||+++|+|+|.++.. |. +..+.+. |+++.+. -+.++|.+
T Consensus 272 ~~l~~~ad~--~v~~Sg-gi~~Ea~~~g~PvI~~~~~--~~--~~~~~~~-g~~~~~~--------------~~~~~i~~ 329 (363)
T cd03786 272 LLLLKNADL--VLTDSG-GIQEEASFLGVPVLNLRDR--TE--RPETVES-GTNVLVG--------------TDPEAILA 329 (363)
T ss_pred HHHHHcCcE--EEEcCc-cHHhhhhhcCCCEEeeCCC--Cc--cchhhhe-eeEEecC--------------CCHHHHHH
Confidence 34555666 999999 7788999999999998743 22 3334334 7665554 25789999
Q ss_pred HHHHHhcCc
Q 044031 419 RVRELMMGS 427 (468)
Q Consensus 419 av~~~l~~~ 427 (468)
++.++++++
T Consensus 330 ~i~~ll~~~ 338 (363)
T cd03786 330 AIEKLLSDE 338 (363)
T ss_pred HHHHHhcCc
Confidence 999999887
No 64
>COG3980 spsG Spore coat polysaccharide biosynthesis protein, predicted glycosyltransferase [Cell envelope biogenesis, outer membrane]
Probab=98.74 E-value=4.8e-07 Score=81.16 Aligned_cols=138 Identities=14% Similarity=0.193 Sum_probs=98.2
Q ss_pred eEEeccCCCcCCCHHHHHHHHHHHHhCCCcEEEEEeCCCCccccCCChhHHhhc-cCCCeEecCCCC-HHhhhCccCcce
Q 044031 272 VVFLCFGSRGTFSAPQLKEIAIGLERSNQRFLWVVRNPSNAAEAELPEGFLERT-KERGLVVKSWAP-QSTILGHESVGG 349 (468)
Q Consensus 272 ~v~vs~GS~~~~~~~~~~~~~~al~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~-~~~~~~v~~~~p-q~~il~~~~~~~ 349 (468)
-|+|++|-. .+.....+++..|.+.++.+-.++|.. ...+++...+. ..+++...-... ...+...++.
T Consensus 160 ~ilI~lGGs--Dpk~lt~kvl~~L~~~~~nl~iV~gs~-----~p~l~~l~k~~~~~~~i~~~~~~~dma~LMke~d~-- 230 (318)
T COG3980 160 DILITLGGS--DPKNLTLKVLAELEQKNVNLHIVVGSS-----NPTLKNLRKRAEKYPNINLYIDTNDMAELMKEADL-- 230 (318)
T ss_pred eEEEEccCC--ChhhhHHHHHHHhhccCeeEEEEecCC-----CcchhHHHHHHhhCCCeeeEecchhHHHHHHhcch--
Confidence 699999866 344566778888988887777777743 11223333332 234554433333 4457778887
Q ss_pred EEecCCcchHHHHHHhCCcEEecccccchhhHHHHHHhhcceeeeeccCCcccccCCCCccccHHHHHHHHHHHhcCchh
Q 044031 350 FVTHCGWSSVVEAVTYGVPMIAWPLYAEQFLNSVALVQEMKVAMPMFLNGEEETIGNGEGVVSAERVEERVRELMMGSEG 429 (468)
Q Consensus 350 ~ithgG~~s~~eal~~GvP~v~~P~~~DQ~~na~~~~~~~g~g~~~~~~~~~~~~~~~~~~~~~~~l~~av~~~l~~~~~ 429 (468)
.|+-+| .|+.|++..|+|.+++|+...|---|+..+ .+|+-..+.. . ++.+.+.-.+.++++|.
T Consensus 231 aI~AaG-stlyEa~~lgvP~l~l~~a~NQ~~~a~~f~-~lg~~~~l~~---------~---l~~~~~~~~~~~i~~d~-- 294 (318)
T COG3980 231 AISAAG-STLYEALLLGVPSLVLPLAENQIATAKEFE-ALGIIKQLGY---------H---LKDLAKDYEILQIQKDY-- 294 (318)
T ss_pred heeccc-hHHHHHHHhcCCceEEeeeccHHHHHHHHH-hcCchhhccC---------C---CchHHHHHHHHHhhhCH--
Confidence 898888 699999999999999999999999999995 5587777763 2 67777777788888887
Q ss_pred HHHHHH
Q 044031 430 KALRER 435 (468)
Q Consensus 430 ~~~~~~ 435 (468)
..|++
T Consensus 295 -~~rk~ 299 (318)
T COG3980 295 -ARRKN 299 (318)
T ss_pred -HHhhh
Confidence 44444
No 65
>cd03821 GT1_Bme6_like This family is most closely related to the GT1 family of glycosyltransferases. Bme6 in Brucella melitensis has been shown to be involved in the biosynthesis of a polysaccharide.
Probab=98.73 E-value=2.3e-05 Score=76.44 Aligned_cols=93 Identities=13% Similarity=0.039 Sum_probs=64.4
Q ss_pred CCCeEecCCCCHHh---hhCccCcceEEec--CCcchHHHHHHhCCcEEecccccchhhHHHHHHhhcceeeeeccCCcc
Q 044031 327 ERGLVVKSWAPQST---ILGHESVGGFVTH--CGWSSVVEAVTYGVPMIAWPLYAEQFLNSVALVQEMKVAMPMFLNGEE 401 (468)
Q Consensus 327 ~~~~~v~~~~pq~~---il~~~~~~~~ith--gG~~s~~eal~~GvP~v~~P~~~DQ~~na~~~~~~~g~g~~~~~~~~~ 401 (468)
..++.+.+|+++.+ ++..+++-++-++ +-.+++.||+++|+|+|+-+.. .....+. . +.|....
T Consensus 261 ~~~v~~~g~~~~~~~~~~~~~adv~v~ps~~e~~~~~~~Eama~G~PvI~~~~~----~~~~~~~-~-~~~~~~~----- 329 (375)
T cd03821 261 EDRVTFTGMLYGEDKAAALADADLFVLPSHSENFGIVVAEALACGTPVVTTDKV----PWQELIE-Y-GCGWVVD----- 329 (375)
T ss_pred cceEEEcCCCChHHHHHHHhhCCEEEeccccCCCCcHHHHHHhcCCCEEEcCCC----CHHHHhh-c-CceEEeC-----
Confidence 46788889999654 4677777322232 2256899999999999997643 3444443 4 7777665
Q ss_pred cccCCCCccccHHHHHHHHHHHhcCch-hHHHHHHHHHH
Q 044031 402 ETIGNGEGVVSAERVEERVRELMMGSE-GKALRERSLEM 439 (468)
Q Consensus 402 ~~~~~~~~~~~~~~l~~av~~~l~~~~-~~~~~~~a~~l 439 (468)
.+.+++.+++.+++++++ .+++.+++++.
T Consensus 330 ---------~~~~~~~~~i~~l~~~~~~~~~~~~~~~~~ 359 (375)
T cd03821 330 ---------DDVDALAAALRRALELPQRLKAMGENGRAL 359 (375)
T ss_pred ---------CChHHHHHHHHHHHhCHHHHHHHHHHHHHH
Confidence 244899999999999874 45666666555
No 66
>cd05844 GT1_like_7 Glycosyltransferases catalyze the transfer of sugar moieties from activated donor molecules to specific acceptor molecules, forming glycosidic bonds. The acceptor molecule can be a lipid, a protein, a heterocyclic compound, or another carbohydrate residue. This group of glycosyltransferases is most closely related to the previously defined glycosyltransferase family 1 (GT1). The members of this family may transfer UDP, ADP, GDP, or CMP linked sugars. The diverse enzymatic activities among members of this family reflect a wide range of biological functions. The protein structure available for this family has the GTB topology, one of the two protein topologies observed for nucleotide-sugar-dependent glycosyltransferases. GTB proteins have distinct N- and C- terminal domains each containing a typical Rossmann fold. The two domains have high structural homology despite minimal sequence homology. The large cleft that separates the two domains includes the catalytic center
Probab=98.72 E-value=5.9e-06 Score=81.12 Aligned_cols=93 Identities=11% Similarity=0.100 Sum_probs=67.3
Q ss_pred CCCeEecCCCCHHh---hhCccCcceEEec----------CCcchHHHHHHhCCcEEecccccchhhHHHHHHhhcceee
Q 044031 327 ERGLVVKSWAPQST---ILGHESVGGFVTH----------CGWSSVVEAVTYGVPMIAWPLYAEQFLNSVALVQEMKVAM 393 (468)
Q Consensus 327 ~~~~~v~~~~pq~~---il~~~~~~~~ith----------gG~~s~~eal~~GvP~v~~P~~~DQ~~na~~~~~~~g~g~ 393 (468)
..++.+.+++|+.+ ++..+++ +|.- |-.+++.||+++|+|+|+-+..+ +...+.+. +.|.
T Consensus 244 ~~~v~~~g~~~~~~l~~~~~~ad~--~v~ps~~~~~~~~E~~~~~~~EA~a~G~PvI~s~~~~----~~e~i~~~-~~g~ 316 (367)
T cd05844 244 GGRVTFLGAQPHAEVRELMRRARI--FLQPSVTAPSGDAEGLPVVLLEAQASGVPVVATRHGG----IPEAVEDG-ETGL 316 (367)
T ss_pred CCeEEECCCCCHHHHHHHHHhCCE--EEECcccCCCCCccCCchHHHHHHHcCCCEEEeCCCC----chhheecC-CeeE
Confidence 45688889998754 4777777 5432 23578999999999999877643 55555443 7888
Q ss_pred eeccCCcccccCCCCccccHHHHHHHHHHHhcCch-hHHHHHHHHHH
Q 044031 394 PMFLNGEEETIGNGEGVVSAERVEERVRELMMGSE-GKALRERSLEM 439 (468)
Q Consensus 394 ~~~~~~~~~~~~~~~~~~~~~~l~~av~~~l~~~~-~~~~~~~a~~l 439 (468)
.++. -+.+++.+++.++++|++ .+++++++++.
T Consensus 317 ~~~~-------------~d~~~l~~~i~~l~~~~~~~~~~~~~a~~~ 350 (367)
T cd05844 317 LVPE-------------GDVAALAAALGRLLADPDLRARMGAAGRRR 350 (367)
T ss_pred EECC-------------CCHHHHHHHHHHHHcCHHHHHHHHHHHHHH
Confidence 7763 477899999999999885 45566666554
No 67
>cd03819 GT1_WavL_like This family is most closely related to the GT1 family of glycosyltransferases. WavL in Vibrio cholerae has been shown to be involved in the biosynthesis of the lipopolysaccharide core.
Probab=98.71 E-value=1.7e-05 Score=77.39 Aligned_cols=150 Identities=13% Similarity=0.056 Sum_probs=87.4
Q ss_pred ceEEeccCCCcC-CCHHHHHHHHHHHHhC--CCcEEEEEeCCCCccccCCChhHH---hh-ccCCCeEecCCCC-HHhhh
Q 044031 271 SVVFLCFGSRGT-FSAPQLKEIAIGLERS--NQRFLWVVRNPSNAAEAELPEGFL---ER-TKERGLVVKSWAP-QSTIL 342 (468)
Q Consensus 271 ~~v~vs~GS~~~-~~~~~~~~~~~al~~~--~~~~l~~~~~~~~~~~~~~~~~~~---~~-~~~~~~~v~~~~p-q~~il 342 (468)
..+++..|.+.. ...+.+.+++..+... +..+++ +|.... ...+...+. .. ...+++.+.+|.+ -..++
T Consensus 185 ~~~i~~~Gr~~~~Kg~~~li~~~~~l~~~~~~~~l~i-vG~~~~--~~~~~~~~~~~~~~~~~~~~v~~~g~~~~~~~~l 261 (355)
T cd03819 185 KPVILLPGRLTRWKGQEVFIEALARLKKDDPDVHLLI-VGDAQG--RRFYYAELLELIKRLGLQDRVTFVGHCSDMPAAY 261 (355)
T ss_pred ceEEEEeeccccccCHHHHHHHHHHHHhcCCCeEEEE-EECCcc--cchHHHHHHHHHHHcCCcceEEEcCCcccHHHHH
Confidence 366777787753 3345566666666553 445444 443310 001111111 11 1235677778854 34577
Q ss_pred CccCcceEEec--CC-cchHHHHHHhCCcEEecccccchhhHHHHHHhhcceeeeeccCCcccccCCCCccccHHHHHHH
Q 044031 343 GHESVGGFVTH--CG-WSSVVEAVTYGVPMIAWPLYAEQFLNSVALVQEMKVAMPMFLNGEEETIGNGEGVVSAERVEER 419 (468)
Q Consensus 343 ~~~~~~~~ith--gG-~~s~~eal~~GvP~v~~P~~~DQ~~na~~~~~~~g~g~~~~~~~~~~~~~~~~~~~~~~~l~~a 419 (468)
..+++.++-++ -| .+++.||+++|+|+|+.-..+ ....+. .-+.|..++. -+.+++.++
T Consensus 262 ~~ad~~i~ps~~~e~~~~~l~EA~a~G~PvI~~~~~~----~~e~i~-~~~~g~~~~~-------------~~~~~l~~~ 323 (355)
T cd03819 262 ALADIVVSASTEPEAFGRTAVEAQAMGRPVIASDHGG----ARETVR-PGETGLLVPP-------------GDAEALAQA 323 (355)
T ss_pred HhCCEEEecCCCCCCCchHHHHHHhcCCCEEEcCCCC----cHHHHh-CCCceEEeCC-------------CCHHHHHHH
Confidence 77887433332 23 359999999999999875432 344443 3247877763 478899999
Q ss_pred HHHHhc-Cch-hHHHHHHHHHHHH
Q 044031 420 VRELMM-GSE-GKALRERSLEMRM 441 (468)
Q Consensus 420 v~~~l~-~~~-~~~~~~~a~~l~~ 441 (468)
|..++. +++ .++++++|++..+
T Consensus 324 i~~~~~~~~~~~~~~~~~a~~~~~ 347 (355)
T cd03819 324 LDQILSLLPEGRAKMFAKARMCVE 347 (355)
T ss_pred HHHHHhhCHHHHHHHHHHHHHHHH
Confidence 965553 554 6677777777654
No 68
>TIGR02472 sucr_P_syn_N sucrose-phosphate synthase, putative, glycosyltransferase domain. This family consists of the N-terminal regions, or in some cases the entirety, of bacterial proteins closely related to plant sucrose-phosphate synthases (SPS). The C-terminal domain (TIGR02471), found with most members of this family, resembles both bona fide plant sucrose-phosphate phosphatases (SPP) and the SPP-like domain of plant SPS. At least two members of this family lack the SPP-like domain, which may have binding or regulatory rather than enzymatic activity by analogy to plant SPS. This enzyme produces sucrose 6-phosphate and UDP from UDP-glucose and D-fructose 6-phosphate, and may be encoded near the gene for fructokinase.
Probab=98.69 E-value=5.2e-05 Score=76.47 Aligned_cols=94 Identities=13% Similarity=0.136 Sum_probs=63.5
Q ss_pred CCCeEecCCCCHHhh---hCcc--CcceEEecC---C-cchHHHHHHhCCcEEecccccchhhHHHHHHhhcceeeeecc
Q 044031 327 ERGLVVKSWAPQSTI---LGHE--SVGGFVTHC---G-WSSVVEAVTYGVPMIAWPLYAEQFLNSVALVQEMKVAMPMFL 397 (468)
Q Consensus 327 ~~~~~v~~~~pq~~i---l~~~--~~~~~ithg---G-~~s~~eal~~GvP~v~~P~~~DQ~~na~~~~~~~g~g~~~~~ 397 (468)
..++.+.+++++.++ +..+ +.++||... | -.+++||+++|+|+|+.-..+ +...+. .-..|+.++.
T Consensus 316 ~~~V~f~g~~~~~~~~~~~~~a~~~~Dv~v~pS~~E~fg~~~lEAma~G~PvV~s~~gg----~~eiv~-~~~~G~lv~~ 390 (439)
T TIGR02472 316 YGKVAYPKHHRPDDVPELYRLAARSRGIFVNPALTEPFGLTLLEAAACGLPIVATDDGG----PRDIIA-NCRNGLLVDV 390 (439)
T ss_pred CceEEecCCCCHHHHHHHHHHHhhcCCEEecccccCCcccHHHHHHHhCCCEEEeCCCC----cHHHhc-CCCcEEEeCC
Confidence 345777788887664 4433 124477543 3 459999999999999986543 344443 3256877764
Q ss_pred CCcccccCCCCccccHHHHHHHHHHHhcCch-hHHHHHHHHH
Q 044031 398 NGEEETIGNGEGVVSAERVEERVRELMMGSE-GKALRERSLE 438 (468)
Q Consensus 398 ~~~~~~~~~~~~~~~~~~l~~av~~~l~~~~-~~~~~~~a~~ 438 (468)
-+.+++.++|.++++|++ .++|.+++++
T Consensus 391 -------------~d~~~la~~i~~ll~~~~~~~~~~~~a~~ 419 (439)
T TIGR02472 391 -------------LDLEAIASALEDALSDSSQWQLWSRNGIE 419 (439)
T ss_pred -------------CCHHHHHHHHHHHHhCHHHHHHHHHHHHH
Confidence 478899999999999885 4556565544
No 69
>cd03798 GT1_wlbH_like This family is most closely related to the GT1 family of glycosyltransferases. wlbH in Bordetella parapertussis has been shown to be required for the biosynthesis of a trisaccharide that, when attached to the B. pertussis lipopolysaccharide (LPS) core (band B), generates band A LPS.
Probab=98.69 E-value=4.6e-05 Score=74.07 Aligned_cols=132 Identities=14% Similarity=0.068 Sum_probs=79.9
Q ss_pred eEEeccCCCcC-CCHHHHHHHHHHHHhC--CCcEEEEEeCCCCccccCCChhHHhh----ccCCCeEecCCCCHH---hh
Q 044031 272 VVFLCFGSRGT-FSAPQLKEIAIGLERS--NQRFLWVVRNPSNAAEAELPEGFLER----TKERGLVVKSWAPQS---TI 341 (468)
Q Consensus 272 ~v~vs~GS~~~-~~~~~~~~~~~al~~~--~~~~l~~~~~~~~~~~~~~~~~~~~~----~~~~~~~v~~~~pq~---~i 341 (468)
.+++..|+... ...+.+.++++.+... +..+++ +|.... .+.+.+. ....++.+.+++++. .+
T Consensus 203 ~~i~~~g~~~~~k~~~~li~~~~~~~~~~~~~~l~i-~g~~~~------~~~~~~~~~~~~~~~~v~~~g~~~~~~~~~~ 275 (377)
T cd03798 203 KVILFVGRLVPRKGIDYLIEALARLLKKRPDVHLVI-VGDGPL------REALEALAAELGLEDRVTFLGAVPHEEVPAY 275 (377)
T ss_pred eEEEEeccCccccCHHHHHHHHHHHHhcCCCeEEEE-EcCCcc------hHHHHHHHHhcCCcceEEEeCCCCHHHHHHH
Confidence 66777788753 2233444444444433 334333 333210 0112111 124678888999875 45
Q ss_pred hCccCcceEE--ecCCcchHHHHHHhCCcEEecccccchhhHHHHHHhhcceeeeeccCCcccccCCCCccccHHHHHHH
Q 044031 342 LGHESVGGFV--THCGWSSVVEAVTYGVPMIAWPLYAEQFLNSVALVQEMKVAMPMFLNGEEETIGNGEGVVSAERVEER 419 (468)
Q Consensus 342 l~~~~~~~~i--thgG~~s~~eal~~GvP~v~~P~~~DQ~~na~~~~~~~g~g~~~~~~~~~~~~~~~~~~~~~~~l~~a 419 (468)
+..+++.++. +-+..+++.||+++|+|+|+-+..+ ....+. ..+.|...+. -+.+++.++
T Consensus 276 ~~~ad~~i~~~~~~~~~~~~~Ea~~~G~pvI~~~~~~----~~~~~~-~~~~g~~~~~-------------~~~~~l~~~ 337 (377)
T cd03798 276 YAAADVFVLPSLREGFGLVLLEAMACGLPVVATDVGG----IPEIIT-DGENGLLVPP-------------GDPEALAEA 337 (377)
T ss_pred HHhcCeeecchhhccCChHHHHHHhcCCCEEEecCCC----hHHHhc-CCcceeEECC-------------CCHHHHHHH
Confidence 6677772222 2245678999999999999876543 344454 3366777763 578899999
Q ss_pred HHHHhcCch
Q 044031 420 VRELMMGSE 428 (468)
Q Consensus 420 v~~~l~~~~ 428 (468)
+.+++++++
T Consensus 338 i~~~~~~~~ 346 (377)
T cd03798 338 ILRLLADPW 346 (377)
T ss_pred HHHHhcCcH
Confidence 999999873
No 70
>cd03805 GT1_ALG2_like This family is most closely related to the GT1 family of glycosyltransferases. ALG2, a 1,3-mannosyltransferase, in yeast catalyzes the mannosylation of Man(2)GlcNAc(2)-dolichol diphosphate and Man(1)GlcNAc(2)-dolichol diphosphate to form Man(3)GlcNAc(2)-dolichol diphosphate. A deficiency of this enzyme causes an abnormal accumulation of Man1GlcNAc2-PP-dolichol and Man2GlcNAc2-PP-dolichol, which is associated with a type of congenital disorders of glycosylation (CDG), designated CDG-Ii, in humans.
Probab=98.67 E-value=3.8e-05 Score=76.18 Aligned_cols=148 Identities=15% Similarity=0.075 Sum_probs=86.4
Q ss_pred ceEEeccCCCcC-CCHHHHHHHHHHHHhC-----CCcEEEEEeCCCC-ccccCCChhHHh-----hccCCCeEecCCCCH
Q 044031 271 SVVFLCFGSRGT-FSAPQLKEIAIGLERS-----NQRFLWVVRNPSN-AAEAELPEGFLE-----RTKERGLVVKSWAPQ 338 (468)
Q Consensus 271 ~~v~vs~GS~~~-~~~~~~~~~~~al~~~-----~~~~l~~~~~~~~-~~~~~~~~~~~~-----~~~~~~~~v~~~~pq 338 (468)
..+++..|++.. ...+.+.+++..+... +..++++-++... ......-+.+.+ ....+++.+.+++|+
T Consensus 211 ~~~i~~~grl~~~Kg~~~ll~a~~~l~~~~~~~~~~~l~i~G~~~~~~~~~~~~~~~l~~~~~~~~~l~~~V~f~g~~~~ 290 (392)
T cd03805 211 KKTFLSINRFERKKNIALAIEAFAILKDKLAEFKNVRLVIAGGYDPRVAENVEYLEELQRLAEELLLLEDQVIFLPSISD 290 (392)
T ss_pred ceEEEEEeeecccCChHHHHHHHHHHHhhcccccCeEEEEEcCCCCCCchhHHHHHHHHHHHHHhcCCCceEEEeCCCCh
Confidence 377777888752 3344444444444432 4555554332210 000000011211 112467888899997
Q ss_pred Hh---hhCccCcceEEec---CC-cchHHHHHHhCCcEEecccccchhhHHHHHHhhcceeeeeccCCcccccCCCCccc
Q 044031 339 ST---ILGHESVGGFVTH---CG-WSSVVEAVTYGVPMIAWPLYAEQFLNSVALVQEMKVAMPMFLNGEEETIGNGEGVV 411 (468)
Q Consensus 339 ~~---il~~~~~~~~ith---gG-~~s~~eal~~GvP~v~~P~~~DQ~~na~~~~~~~g~g~~~~~~~~~~~~~~~~~~~ 411 (468)
.+ ++..+++ ++.. -| ..++.||+++|+|+|+.-..+ ....+.+. +.|.... .
T Consensus 291 ~~~~~~l~~ad~--~l~~s~~E~~g~~~lEAma~G~PvI~s~~~~----~~e~i~~~-~~g~~~~--------------~ 349 (392)
T cd03805 291 SQKELLLSSARA--LLYTPSNEHFGIVPLEAMYAGKPVIACNSGG----PLETVVDG-ETGFLCE--------------P 349 (392)
T ss_pred HHHHHHHhhCeE--EEECCCcCCCCchHHHHHHcCCCEEEECCCC----cHHHhccC-CceEEeC--------------C
Confidence 64 5777777 5532 22 357899999999999975433 33345332 5676665 4
Q ss_pred cHHHHHHHHHHHhcCch-hHHHHHHHHHH
Q 044031 412 SAERVEERVRELMMGSE-GKALRERSLEM 439 (468)
Q Consensus 412 ~~~~l~~av~~~l~~~~-~~~~~~~a~~l 439 (468)
+.+++.++|.+++++++ .++|++++++.
T Consensus 350 ~~~~~a~~i~~l~~~~~~~~~~~~~a~~~ 378 (392)
T cd03805 350 TPEEFAEAMLKLANDPDLADRMGAAGRKR 378 (392)
T ss_pred CHHHHHHHHHHHHhChHHHHHHHHHHHHH
Confidence 67899999999999885 56677777654
No 71
>COG1519 KdtA 3-deoxy-D-manno-octulosonic-acid transferase [Cell envelope biogenesis, outer membrane]
Probab=98.65 E-value=3.4e-06 Score=80.65 Aligned_cols=322 Identities=14% Similarity=0.168 Sum_probs=176.8
Q ss_pred EecCCCccCHHHHHHHHHHHHhCCCCcEEEEEeCCCCCCchhhhhhhhccccCCCCCeeEEEcCCCCCCCCCCChhHHHH
Q 044031 7 LYPGPAFHHMISMVELGKLILQHRSDVSITILVPSMPLEESKTCSYINSISHRLNPIISFYYLPAIQMPSETLSRADIAI 86 (468)
Q Consensus 7 ~~~~~~~GHv~P~l~LA~~L~~~G~~h~Vt~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~i~~~~lp~~~~~~~~~~~ 86 (468)
-+=..+-|-++-.+.|.++|.++-|++.|++.+..+.... ..... ....+...-+|.+ +
T Consensus 53 WiHaaSVGEv~a~~pLv~~l~~~~P~~~ilvTt~T~Tg~e-----~a~~~---~~~~v~h~YlP~D-~------------ 111 (419)
T COG1519 53 WIHAASVGEVLAALPLVRALRERFPDLRILVTTMTPTGAE-----RAAAL---FGDSVIHQYLPLD-L------------ 111 (419)
T ss_pred EEEecchhHHHHHHHHHHHHHHhCCCCCEEEEecCccHHH-----HHHHH---cCCCeEEEecCcC-c------------
Confidence 3334678899999999999999977789988874332211 11111 2223455545544 1
Q ss_pred HHHHHhhHHHHHHHHhhhcCCCccEEEe----cCcHH--HhhhCCCCeEEEecchhHHHHHHHhhhhhhhcccCCCCCCC
Q 044031 87 ESIKLNSSNVFQALENISLTSKILSFII----TSTTS--FSYHPNIPTYTYFNSCASTLAAILYLPTLHNQITSSFKDHP 160 (468)
Q Consensus 87 ~~~~~~~~~l~~ll~~~~~~~~pD~vI~----~~~~~--vA~~lgIP~i~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~ 160 (468)
...+...++.+ +||++|. .|-.. -+++.|+|.+.... .+..
T Consensus 112 ------~~~v~rFl~~~----~P~l~Ii~EtElWPnli~e~~~~~~p~~LvNa-------------RLS~---------- 158 (419)
T COG1519 112 ------PIAVRRFLRKW----RPKLLIIMETELWPNLINELKRRGIPLVLVNA-------------RLSD---------- 158 (419)
T ss_pred ------hHHHHHHHHhc----CCCEEEEEeccccHHHHHHHHHcCCCEEEEee-------------eech----------
Confidence 11234557777 9999888 55444 56679999887533 0000
Q ss_pred CccccCCCCCCCCCCCCCccccCCCchhHHHHHHHhhh-hcccceEEecChhhhhHHHHHHHHcCcccCCCCCCCeeEec
Q 044031 161 SSLLFIPGLPPVKSSFMPEPVLDRQKPIYDFFLNYSTS-LSKSNGIIINTFDFLEQQAIKAIVNGDCVTNGTTPPLHCIG 239 (468)
Q Consensus 161 ~~~~~~pg~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~-~~~~~~~l~~s~~~le~~~~~~~~~~~~~~~~~~p~~~~VG 239 (468)
.+.+ .|..+-...+. +.+-+.++.-|-. +......+ | .+++...|
T Consensus 159 ---rS~~--------------------~y~k~~~~~~~~~~~i~li~aQse~--D~~Rf~~L-------G--a~~v~v~G 204 (419)
T COG1519 159 ---RSFA--------------------RYAKLKFLARLLFKNIDLILAQSEE--DAQRFRSL-------G--AKPVVVTG 204 (419)
T ss_pred ---hhhH--------------------HHHHHHHHHHHHHHhcceeeecCHH--HHHHHHhc-------C--CcceEEec
Confidence 0000 01111111111 1223333333322 22211111 1 24577778
Q ss_pred ccccCCcCCCCCCCCCCcchhHHhhcCCCCCceEEeccCCCcCCCHHHHHHHHHHHHhC--CCcEEEEEeCCCCccccCC
Q 044031 240 PLIVDAKDRAGGVSDDVSSDCLTWLDSQPSGSVVFLCFGSRGTFSAPQLKEIAIGLERS--NQRFLWVVRNPSNAAEAEL 317 (468)
Q Consensus 240 pl~~~~~~~~~~~~~~~~~~l~~~l~~~~~~~~v~vs~GS~~~~~~~~~~~~~~al~~~--~~~~l~~~~~~~~~~~~~~ 317 (468)
-+=.+-.... . +......|-..-+....+.|..+|. ....+.+-+...+|.+. +...||+=+.+ +.+
T Consensus 205 NlKfd~~~~~-~----~~~~~~~~r~~l~~~r~v~iaaSTH-~GEeei~l~~~~~l~~~~~~~llIlVPRHp-----ERf 273 (419)
T COG1519 205 NLKFDIEPPP-Q----LAAELAALRRQLGGHRPVWVAASTH-EGEEEIILDAHQALKKQFPNLLLILVPRHP-----ERF 273 (419)
T ss_pred ceeecCCCCh-h----hHHHHHHHHHhcCCCCceEEEecCC-CchHHHHHHHHHHHHhhCCCceEEEecCCh-----hhH
Confidence 7754432111 0 2223333322212112666766664 23445455666666543 46777775543 111
Q ss_pred ChhHHhhc-----------------cCCCeEecCCCCHHhh-hCccCc---ce-EEecCCcchHHHHHHhCCcEEecccc
Q 044031 318 PEGFLERT-----------------KERGLVVKSWAPQSTI-LGHESV---GG-FVTHCGWSSVVEAVTYGVPMIAWPLY 375 (468)
Q Consensus 318 ~~~~~~~~-----------------~~~~~~v~~~~pq~~i-l~~~~~---~~-~ithgG~~s~~eal~~GvP~v~~P~~ 375 (468)
+ .+.+.. .+.++++.|-+--+-+ +.-+++ |+ |+.+||+| ..|++++|+|+|.=|+.
T Consensus 274 ~-~v~~l~~~~gl~~~~rS~~~~~~~~tdV~l~DtmGEL~l~y~~adiAFVGGSlv~~GGHN-~LEpa~~~~pvi~Gp~~ 351 (419)
T COG1519 274 K-AVENLLKRKGLSVTRRSQGDPPFSDTDVLLGDTMGELGLLYGIADIAFVGGSLVPIGGHN-PLEPAAFGTPVIFGPYT 351 (419)
T ss_pred H-HHHHHHHHcCCeEEeecCCCCCCCCCcEEEEecHhHHHHHHhhccEEEECCcccCCCCCC-hhhHHHcCCCEEeCCcc
Confidence 1 001111 1224455454433322 222222 11 55688887 68999999999999999
Q ss_pred cchhhHHHHHHhhcceeeeeccCCcccccCCCCccccHHHHHHHHHHHhcCch-hHHHHHHHHHHHHHHHH
Q 044031 376 AEQFLNSVALVQEMKVAMPMFLNGEEETIGNGEGVVSAERVEERVRELMMGSE-GKALRERSLEMRMMAAT 445 (468)
Q Consensus 376 ~DQ~~na~~~~~~~g~g~~~~~~~~~~~~~~~~~~~~~~~l~~av~~~l~~~~-~~~~~~~a~~l~~~~~~ 445 (468)
..|..-++++.+. |+|+.++ +++.+.+++..+++|++ .++|.+++.++-+..+.
T Consensus 352 ~Nf~ei~~~l~~~-ga~~~v~---------------~~~~l~~~v~~l~~~~~~r~~~~~~~~~~v~~~~g 406 (419)
T COG1519 352 FNFSDIAERLLQA-GAGLQVE---------------DADLLAKAVELLLADEDKREAYGRAGLEFLAQNRG 406 (419)
T ss_pred ccHHHHHHHHHhc-CCeEEEC---------------CHHHHHHHHHHhcCCHHHHHHHHHHHHHHHHHhhH
Confidence 9999999999866 9999997 36789999999998875 56777777666554444
No 72
>cd03822 GT1_ecORF704_like This family is most closely related to the GT1 family of glycosyltransferases. ORF704 in E. coli has been shown to be involved in the biosynthesis of O-specific mannose homopolysaccharides.
Probab=98.65 E-value=7.3e-05 Score=72.91 Aligned_cols=96 Identities=17% Similarity=0.260 Sum_probs=63.9
Q ss_pred CCCeEecC-CCCHH---hhhCccCcceEEec----CCcchHHHHHHhCCcEEecccccchhhHHHHHHhhcceeeeeccC
Q 044031 327 ERGLVVKS-WAPQS---TILGHESVGGFVTH----CGWSSVVEAVTYGVPMIAWPLYAEQFLNSVALVQEMKVAMPMFLN 398 (468)
Q Consensus 327 ~~~~~v~~-~~pq~---~il~~~~~~~~ith----gG~~s~~eal~~GvP~v~~P~~~DQ~~na~~~~~~~g~g~~~~~~ 398 (468)
..++.+.+ |+|+. .++..+++-++-++ +-.++++||+++|+|+|+-+..+ ...+.+. +.|.....
T Consensus 246 ~~~v~~~~~~~~~~~~~~~~~~ad~~v~ps~~e~~~~~~~~~Ea~a~G~PvI~~~~~~-----~~~i~~~-~~g~~~~~- 318 (366)
T cd03822 246 ADRVIFINRYLPDEELPELFSAADVVVLPYRSADQTQSGVLAYAIGFGKPVISTPVGH-----AEEVLDG-GTGLLVPP- 318 (366)
T ss_pred CCcEEEecCcCCHHHHHHHHhhcCEEEecccccccccchHHHHHHHcCCCEEecCCCC-----hheeeeC-CCcEEEcC-
Confidence 45666554 58864 46667776222222 33568999999999999987654 2333333 67777763
Q ss_pred CcccccCCCCccccHHHHHHHHHHHhcCch-hHHHHHHHHHHHH
Q 044031 399 GEEETIGNGEGVVSAERVEERVRELMMGSE-GKALRERSLEMRM 441 (468)
Q Consensus 399 ~~~~~~~~~~~~~~~~~l~~av~~~l~~~~-~~~~~~~a~~l~~ 441 (468)
-+.+++.+++.++++|++ .+++++++++..+
T Consensus 319 ------------~d~~~~~~~l~~l~~~~~~~~~~~~~~~~~~~ 350 (366)
T cd03822 319 ------------GDPAALAEAIRRLLADPELAQALRARAREYAR 350 (366)
T ss_pred ------------CCHHHHHHHHHHHHcChHHHHHHHHHHHHHHh
Confidence 368899999999999874 4556666655443
No 73
>cd03796 GT1_PIG-A_like This family is most closely related to the GT1 family of glycosyltransferases. Phosphatidylinositol glycan-class A (PIG-A), an X-linked gene in humans, is necessary for the synthesis of N-acetylglucosaminyl-phosphatidylinositol, a very early intermediate in glycosyl phosphatidylinositol (GPI)-anchor biosynthesis. The GPI-anchor is an important cellular structure that facilitates the attachment of many proteins to cell surfaces. Somatic mutations in PIG-A have been associated with Paroxysmal Nocturnal Hemoglobinuria (PNH), an acquired hematological disorder.
Probab=98.63 E-value=3.9e-05 Score=76.37 Aligned_cols=131 Identities=14% Similarity=0.150 Sum_probs=74.0
Q ss_pred ceEEeccCCCcC-CCHHHHHHHHHHHHh--CCCcEEEEEeCCCCccccCCChhHHhhc-cCCCeEecCCCCHHh---hhC
Q 044031 271 SVVFLCFGSRGT-FSAPQLKEIAIGLER--SNQRFLWVVRNPSNAAEAELPEGFLERT-KERGLVVKSWAPQST---ILG 343 (468)
Q Consensus 271 ~~v~vs~GS~~~-~~~~~~~~~~~al~~--~~~~~l~~~~~~~~~~~~~~~~~~~~~~-~~~~~~v~~~~pq~~---il~ 343 (468)
..+++..|.... ...+.+.+.+..+.+ .+..++++ |... ....+ ....++. ..+++.+.+|+|+.+ +++
T Consensus 193 ~~~i~~~grl~~~Kg~~~li~a~~~l~~~~~~~~l~i~-G~g~--~~~~l-~~~~~~~~l~~~v~~~G~~~~~~~~~~l~ 268 (398)
T cd03796 193 KITIVVISRLVYRKGIDLLVGIIPEICKKHPNVRFIIG-GDGP--KRILL-EEMREKYNLQDRVELLGAVPHERVRDVLV 268 (398)
T ss_pred ceEEEEEeccchhcCHHHHHHHHHHHHhhCCCEEEEEE-eCCc--hHHHH-HHHHHHhCCCCeEEEeCCCCHHHHHHHHH
Confidence 367777787742 223334444444432 34555544 4321 00001 1111222 235677789998654 666
Q ss_pred ccCcceEEe---cCCc-chHHHHHHhCCcEEecccccchhhHHHHHHhhcceeeeeccCCcccccCCCCccccHHHHHHH
Q 044031 344 HESVGGFVT---HCGW-SSVVEAVTYGVPMIAWPLYAEQFLNSVALVQEMKVAMPMFLNGEEETIGNGEGVVSAERVEER 419 (468)
Q Consensus 344 ~~~~~~~it---hgG~-~s~~eal~~GvP~v~~P~~~DQ~~na~~~~~~~g~g~~~~~~~~~~~~~~~~~~~~~~~l~~a 419 (468)
.+++ +|. +-|. .++.||+++|+|+|+-+..+ ....+ +. |.+.... .+.+++.++
T Consensus 269 ~ad~--~v~pS~~E~~g~~~~EAma~G~PVI~s~~gg----~~e~i-~~-~~~~~~~--------------~~~~~l~~~ 326 (398)
T cd03796 269 QGHI--FLNTSLTEAFCIAIVEAASCGLLVVSTRVGG----IPEVL-PP-DMILLAE--------------PDVESIVRK 326 (398)
T ss_pred hCCE--EEeCChhhccCHHHHHHHHcCCCEEECCCCC----chhhe-eC-CceeecC--------------CCHHHHHHH
Confidence 7777 553 2243 39999999999999987653 22334 23 4343332 367899999
Q ss_pred HHHHhcCc
Q 044031 420 VRELMMGS 427 (468)
Q Consensus 420 v~~~l~~~ 427 (468)
+.+++++.
T Consensus 327 l~~~l~~~ 334 (398)
T cd03796 327 LEEAISIL 334 (398)
T ss_pred HHHHHhCh
Confidence 99999864
No 74
>TIGR02470 sucr_synth sucrose synthase. This model represents sucrose synthase, an enzyme that, despite its name, generally uses rather produces sucrose. Sucrose plus UDP (or ADP) becomes D-fructose plus UDP-glucose (or ADP-glucose), which is then available for cell wall (or starch) biosynthesis. The enzyme is homologous to sucrose phosphate synthase, which catalyzes the penultimate step in sucrose synthesis. Sucrose synthase is found, so far, exclusively in plants and cyanobacteria.
Probab=98.60 E-value=8.7e-05 Score=78.15 Aligned_cols=64 Identities=16% Similarity=0.205 Sum_probs=45.7
Q ss_pred chHHHHHHhCCcEEecccccchhhHHHHHHhhcceeeeeccCCcccccCCCCccccHHHHHHHHHHHh----cCch-hHH
Q 044031 357 SSVVEAVTYGVPMIAWPLYAEQFLNSVALVQEMKVAMPMFLNGEEETIGNGEGVVSAERVEERVRELM----MGSE-GKA 431 (468)
Q Consensus 357 ~s~~eal~~GvP~v~~P~~~DQ~~na~~~~~~~g~g~~~~~~~~~~~~~~~~~~~~~~~l~~av~~~l----~~~~-~~~ 431 (468)
.+++||+++|+|+|+.-..+ ....+.+. .-|..++. -+.+++.+++.+++ .|++ +++
T Consensus 658 LvvLEAMAcGlPVVAT~~GG----~~EiV~dg-~tGfLVdp-------------~D~eaLA~aL~~ll~kll~dp~~~~~ 719 (784)
T TIGR02470 658 LTVLEAMTCGLPTFATRFGG----PLEIIQDG-VSGFHIDP-------------YHGEEAAEKIVDFFEKCDEDPSYWQK 719 (784)
T ss_pred HHHHHHHHcCCCEEEcCCCC----HHHHhcCC-CcEEEeCC-------------CCHHHHHHHHHHHHHHhcCCHHHHHH
Confidence 59999999999999976543 34445433 56888874 46788888888775 5775 566
Q ss_pred HHHHHHH
Q 044031 432 LRERSLE 438 (468)
Q Consensus 432 ~~~~a~~ 438 (468)
|.+++++
T Consensus 720 ms~~a~~ 726 (784)
T TIGR02470 720 ISQGGLQ 726 (784)
T ss_pred HHHHHHH
Confidence 7666654
No 75
>PF04007 DUF354: Protein of unknown function (DUF354); InterPro: IPR007152 Members of this family are around 350 amino acids in length. They are found in archaea and some bacteria and have no known function.
Probab=98.59 E-value=3.8e-05 Score=73.34 Aligned_cols=279 Identities=16% Similarity=0.141 Sum_probs=144.1
Q ss_pred EEEecCCCccCHHHHHHHHHHHHhCCCCcEEEEEeCCCCCCchhhhhhhhccccCCCCCeeEEEcCCCCCCCCCCChhHH
Q 044031 5 IALYPGPAFHHMISMVELGKLILQHRSDVSITILVPSMPLEESKTCSYINSISHRLNPIISFYYLPAIQMPSETLSRADI 84 (468)
Q Consensus 5 Iv~~~~~~~GHv~P~l~LA~~L~~~G~~h~Vt~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~i~~~~lp~~~~~~~~~ 84 (468)
|.+-- ...-|+.-+-.+.++|.++| |+|.+.+-+.... .+..+. .++++..+... + .+....
T Consensus 3 IwiDi-~~p~hvhfFk~~I~eL~~~G--heV~it~R~~~~~----~~LL~~------yg~~y~~iG~~----g-~~~~~K 64 (335)
T PF04007_consen 3 IWIDI-THPAHVHFFKNIIRELEKRG--HEVLITARDKDET----EELLDL------YGIDYIVIGKH----G-DSLYGK 64 (335)
T ss_pred EEEEC-CCchHHHHHHHHHHHHHhCC--CEEEEEEeccchH----HHHHHH------cCCCeEEEcCC----C-CCHHHH
Confidence 44433 44459999999999999999 9999986544221 222222 27777776643 1 222221
Q ss_pred HHHHHHHhhHHHHHHHHhhhcCCCccEEEe---cCcHHHhhhCCCCeEEEecchhHHHHHHHhhhhhhhcccCCCCCCCC
Q 044031 85 AIESIKLNSSNVFQALENISLTSKILSFII---TSTTSFSYHPNIPTYTYFNSCASTLAAILYLPTLHNQITSSFKDHPS 161 (468)
Q Consensus 85 ~~~~~~~~~~~l~~ll~~~~~~~~pD~vI~---~~~~~vA~~lgIP~i~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~ 161 (468)
+.....+ ...+.+++++. +||++|+ +.+..+|.-+|+|.+.+.=+........+.+ ++.+
T Consensus 65 l~~~~~R-~~~l~~~~~~~----~pDv~is~~s~~a~~va~~lgiP~I~f~D~e~a~~~~~Lt~---------Pla~--- 127 (335)
T PF04007_consen 65 LLESIER-QYKLLKLIKKF----KPDVAISFGSPEAARVAFGLGIPSIVFNDTEHAIAQNRLTL---------PLAD--- 127 (335)
T ss_pred HHHHHHH-HHHHHHHHHhh----CCCEEEecCcHHHHHHHHHhCCCeEEEecCchhhccceeeh---------hcCC---
Confidence 2222222 22344555555 9999999 4455588889999998866443321110000 1100
Q ss_pred ccccCCCCCCCCCCCCCccccCCCchhHHHHHHHhhhhcccceEE-ecChhhhhHHHHHHHHcCcccCCCCCCCeeEecc
Q 044031 162 SLLFIPGLPPVKSSFMPEPVLDRQKPIYDFFLNYSTSLSKSNGII-INTFDFLEQQAIKAIVNGDCVTNGTTPPLHCIGP 240 (468)
Q Consensus 162 ~~~~~pg~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~l-~~s~~~le~~~~~~~~~~~~~~~~~~p~~~~VGp 240 (468)
.-..|..+.. ... ...-.+ ..+. ++.+.|+- ++=|
T Consensus 128 ------------~i~~P~~~~~-------~~~--~~~G~~-~~i~~y~G~~E~a----------------------yl~~ 163 (335)
T PF04007_consen 128 ------------VIITPEAIPK-------EFL--KRFGAK-NQIRTYNGYKELA----------------------YLHP 163 (335)
T ss_pred ------------eeECCcccCH-------HHH--HhcCCc-CCEEEECCeeeEE----------------------eecC
Confidence 0000111100 000 000001 1122 33333222 1111
Q ss_pred cccCCcCCCCCCCCCCcchhHHhhcCCCCCceEEeccCCCc----CCCHHHHHHHHHHHHhCCCcEEEEEeCCCCccccC
Q 044031 241 LIVDAKDRAGGVSDDVSSDCLTWLDSQPSGSVVFLCFGSRG----TFSAPQLKEIAIGLERSNQRFLWVVRNPSNAAEAE 316 (468)
Q Consensus 241 l~~~~~~~~~~~~~~~~~~l~~~l~~~~~~~~v~vs~GS~~----~~~~~~~~~~~~al~~~~~~~l~~~~~~~~~~~~~ 316 (468)
. + .+.+..+-|+. .+.+.|+|-+-+.. ......+.++++.|+..+..+|...+...
T Consensus 164 -----F-~-------Pd~~vl~~lg~-~~~~yIvvR~~~~~A~y~~~~~~i~~~ii~~L~~~~~~vV~ipr~~~------ 223 (335)
T PF04007_consen 164 -----F-K-------PDPEVLKELGL-DDEPYIVVRPEAWKASYDNGKKSILPEIIEELEKYGRNVVIIPRYED------ 223 (335)
T ss_pred -----C-C-------CChhHHHHcCC-CCCCEEEEEeccccCeeecCccchHHHHHHHHHhhCceEEEecCCcc------
Confidence 1 0 12223333332 23457878777643 22334466789999988876554443321
Q ss_pred CChhHHhhccCCCeE-ecCCCCHHhhhCccCcceEEecCCcchHHHHHHhCCcEEecccccchhhHHHHHHhhcce
Q 044031 317 LPEGFLERTKERGLV-VKSWAPQSTILGHESVGGFVTHCGWSSVVEAVTYGVPMIAWPLYAEQFLNSVALVQEMKV 391 (468)
Q Consensus 317 ~~~~~~~~~~~~~~~-v~~~~pq~~il~~~~~~~~ithgG~~s~~eal~~GvP~v~~P~~~DQ~~na~~~~~~~g~ 391 (468)
.++ ..+ .-++. ...-+.-.++|.++++ +|+-|| ....||...|+|.|.+ +.++-...-+.+.+. |+
T Consensus 224 ~~~-~~~---~~~~~i~~~~vd~~~Ll~~a~l--~Ig~gg-TMa~EAA~LGtPaIs~-~~g~~~~vd~~L~~~-Gl 290 (335)
T PF04007_consen 224 QRE-LFE---KYGVIIPPEPVDGLDLLYYADL--VIGGGG-TMAREAALLGTPAISC-FPGKLLAVDKYLIEK-GL 290 (335)
T ss_pred hhh-HHh---ccCccccCCCCCHHHHHHhcCE--EEeCCc-HHHHHHHHhCCCEEEe-cCCcchhHHHHHHHC-CC
Confidence 111 111 11222 2344555689999998 998777 8889999999999985 333322333445444 54
No 76
>KOG3349 consensus Predicted glycosyltransferase [General function prediction only]
Probab=98.59 E-value=3.3e-07 Score=73.89 Aligned_cols=113 Identities=17% Similarity=0.209 Sum_probs=75.7
Q ss_pred eEEeccCCCcCCCH---HHHHHHHHHHHhCCC-cEEEEEeCCCCccccCCChhHHhhccCCCe--EecCCCCH-HhhhCc
Q 044031 272 VVFLCFGSRGTFSA---PQLKEIAIGLERSNQ-RFLWVVRNPSNAAEAELPEGFLERTKERGL--VVKSWAPQ-STILGH 344 (468)
Q Consensus 272 ~v~vs~GS~~~~~~---~~~~~~~~al~~~~~-~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~--~v~~~~pq-~~il~~ 344 (468)
.+||+-||....+. -.-.+..+.|.+.|. +.+...|.+ ....++.+....+..++ ...+|-|- .+....
T Consensus 5 ~vFVTVGtT~Fd~LI~~Vl~~~~~~~L~k~G~~kLiiQ~Grg----~~~~~d~~~~~~k~~gl~id~y~f~psl~e~I~~ 80 (170)
T KOG3349|consen 5 TVFVTVGTTSFDDLISCVLSEEFLQELQKRGFTKLIIQIGRG----QPFFGDPIDLIRKNGGLTIDGYDFSPSLTEDIRS 80 (170)
T ss_pred EEEEEeccccHHHHHHHHcCHHHHHHHHHcCccEEEEEecCC----ccCCCCHHHhhcccCCeEEEEEecCccHHHHHhh
Confidence 89999999972211 112246677777775 677788765 11223333322233343 34467774 333444
Q ss_pred cCcceEEecCCcchHHHHHHhCCcEEeccc----ccchhhHHHHHHhhcce
Q 044031 345 ESVGGFVTHCGWSSVVEAVTYGVPMIAWPL----YAEQFLNSVALVQEMKV 391 (468)
Q Consensus 345 ~~~~~~ithgG~~s~~eal~~GvP~v~~P~----~~DQ~~na~~~~~~~g~ 391 (468)
+++ +|+|+|+||++|.+..|+|.|+++- ..+|..-|..+++. |.
T Consensus 81 Adl--VIsHAGaGS~letL~l~KPlivVvNd~LMDNHQ~ELA~qL~~e-gy 128 (170)
T KOG3349|consen 81 ADL--VISHAGAGSCLETLRLGKPLIVVVNDSLMDNHQLELAKQLAEE-GY 128 (170)
T ss_pred ccE--EEecCCcchHHHHHHcCCCEEEEeChHhhhhHHHHHHHHHHhc-Cc
Confidence 555 9999999999999999999999994 57899999999754 43
No 77
>cd03799 GT1_amsK_like This is a family of GT1 glycosyltransferases found specifically in certain bacteria. amsK in Erwinia amylovora, has been reported to be involved in the biosynthesis of amylovoran, a exopolysaccharide acting as a virulence factor.
Probab=98.58 E-value=7.2e-05 Score=72.84 Aligned_cols=147 Identities=15% Similarity=0.110 Sum_probs=86.6
Q ss_pred eEEeccCCCcC-CCHHHHHHHHHHHHhC--CCcEEEEEeCCCCccccCCChhHHhhc-cCCCeEecCCCCHHh---hhCc
Q 044031 272 VVFLCFGSRGT-FSAPQLKEIAIGLERS--NQRFLWVVRNPSNAAEAELPEGFLERT-KERGLVVKSWAPQST---ILGH 344 (468)
Q Consensus 272 ~v~vs~GS~~~-~~~~~~~~~~~al~~~--~~~~l~~~~~~~~~~~~~~~~~~~~~~-~~~~~~v~~~~pq~~---il~~ 344 (468)
.+++.+|+... ...+.+.+.+..+... +..+++. |.... ...+ ..+.++. ...++.+.+++|+.+ ++.+
T Consensus 180 ~~i~~~g~~~~~k~~~~l~~~~~~l~~~~~~~~l~i~-G~~~~--~~~~-~~~~~~~~~~~~v~~~g~~~~~~l~~~~~~ 255 (355)
T cd03799 180 LRILSVGRLVEKKGLDYLLEALALLKDRGIDFRLDIV-GDGPL--RDEL-EALIAELGLEDRVTLLGAKSQEEVRELLRA 255 (355)
T ss_pred eEEEEEeeeccccCHHHHHHHHHHHhhcCCCeEEEEE-ECCcc--HHHH-HHHHHHcCCCCeEEECCcCChHHHHHHHHh
Confidence 66667787642 2334444444444443 3444444 33210 0001 1111111 246788889998654 5667
Q ss_pred cCcceEEec--------CCcchHHHHHHhCCcEEecccccchhhHHHHHHhhcceeeeeccCCcccccCCCCccccHHHH
Q 044031 345 ESVGGFVTH--------CGWSSVVEAVTYGVPMIAWPLYAEQFLNSVALVQEMKVAMPMFLNGEEETIGNGEGVVSAERV 416 (468)
Q Consensus 345 ~~~~~~ith--------gG~~s~~eal~~GvP~v~~P~~~DQ~~na~~~~~~~g~g~~~~~~~~~~~~~~~~~~~~~~~l 416 (468)
+++.++-+. |.-+++.||+++|+|+|+.+..+ ....+ +.-..|...+. -+.+++
T Consensus 256 adi~l~~s~~~~~~~~e~~~~~~~Ea~a~G~Pvi~~~~~~----~~~~i-~~~~~g~~~~~-------------~~~~~l 317 (355)
T cd03799 256 ADLFVLPSVTAADGDREGLPVVLMEAMAMGLPVISTDVSG----IPELV-EDGETGLLVPP-------------GDPEAL 317 (355)
T ss_pred CCEEEecceecCCCCccCccHHHHHHHHcCCCEEecCCCC----cchhh-hCCCceEEeCC-------------CCHHHH
Confidence 777333222 33468999999999999976532 22344 34247877763 378999
Q ss_pred HHHHHHHhcCch-hHHHHHHHHHHH
Q 044031 417 EERVRELMMGSE-GKALRERSLEMR 440 (468)
Q Consensus 417 ~~av~~~l~~~~-~~~~~~~a~~l~ 440 (468)
.+++.++++|++ ..+++++|++..
T Consensus 318 ~~~i~~~~~~~~~~~~~~~~a~~~~ 342 (355)
T cd03799 318 ADAIERLLDDPELRREMGEAGRARV 342 (355)
T ss_pred HHHHHHHHhCHHHHHHHHHHHHHHH
Confidence 999999999885 566666665543
No 78
>PF02350 Epimerase_2: UDP-N-acetylglucosamine 2-epimerase; InterPro: IPR003331 UDP-N-acetylglucosamine 2-epimerase 5.1.3.14 from EC catalyses the production of UDP-ManNAc from UDP-GlcNAc. Some of the enzymes is this family are bifunctional. In microorganisms the epimerase is involved in in the synthesis of the capsule precursor UDP-ManNAcA [, ]. The protein from rat liver displays both epimerase and kinase activity [].; GO: 0008761 UDP-N-acetylglucosamine 2-epimerase activity, 0006047 UDP-N-acetylglucosamine metabolic process, 0009103 lipopolysaccharide biosynthetic process; PDB: 1V4V_B 3BEO_B 3DZC_B 3OT5_B 1O6C_B 1VGV_D 1F6D_C.
Probab=98.55 E-value=3.1e-06 Score=82.02 Aligned_cols=163 Identities=11% Similarity=0.130 Sum_probs=87.7
Q ss_pred CCeeEecccccCCcCCCCCCCCCCcchh--HHhhcCCCCCceEEeccCCCcCCC-H---HHHHHHHHHHHhC-CCcEEEE
Q 044031 233 PPLHCIGPLIVDAKDRAGGVSDDVSSDC--LTWLDSQPSGSVVFLCFGSRGTFS-A---PQLKEIAIGLERS-NQRFLWV 305 (468)
Q Consensus 233 p~~~~VGpl~~~~~~~~~~~~~~~~~~l--~~~l~~~~~~~~v~vs~GS~~~~~-~---~~~~~~~~al~~~-~~~~l~~ 305 (468)
.+++.||.+..+.-..... ...... ..++.. .+++.++|++=...... . ..+.+++++|... +.++||.
T Consensus 145 ~rI~~vG~~~~D~l~~~~~---~~~~~~~~~~i~~~-~~~~~iLvt~H~~t~~~~~~~~~~i~~~l~~L~~~~~~~vi~~ 220 (346)
T PF02350_consen 145 ERIFVVGNPGIDALLQNKE---EIEEKYKNSGILQD-APKPYILVTLHPVTNEDNPERLEQILEALKALAERQNVPVIFP 220 (346)
T ss_dssp GGEEE---HHHHHHHHHHH---TTCC-HHHHHHHHC-TTSEEEEEE-S-CCCCTHH--HHHHHHHHHHHHHHTTEEEEEE
T ss_pred CeEEEEChHHHHHHHHhHH---HHhhhhhhHHHHhc-cCCCEEEEEeCcchhcCChHHHHHHHHHHHHHHhcCCCcEEEE
Confidence 5899999876543210000 011122 123222 45569999985554444 3 4566667777665 7889998
Q ss_pred EeCCCCccccCCChhHHhhccC-CCeEecCCCCH---HhhhCccCcceEEecCCcchHH-HHHHhCCcEEecccccchhh
Q 044031 306 VRNPSNAAEAELPEGFLERTKE-RGLVVKSWAPQ---STILGHESVGGFVTHCGWSSVV-EAVTYGVPMIAWPLYAEQFL 380 (468)
Q Consensus 306 ~~~~~~~~~~~~~~~~~~~~~~-~~~~v~~~~pq---~~il~~~~~~~~ithgG~~s~~-eal~~GvP~v~~P~~~DQ~~ 380 (468)
....+. ....+.+.... +++.+.+.+++ ..++.++++ +||..| +++ ||.++|+|+|.+ .|+-.
T Consensus 221 ~hn~p~-----~~~~i~~~l~~~~~v~~~~~l~~~~~l~ll~~a~~--vvgdSs--GI~eEa~~lg~P~v~i---R~~ge 288 (346)
T PF02350_consen 221 LHNNPR-----GSDIIIEKLKKYDNVRLIEPLGYEEYLSLLKNADL--VVGDSS--GIQEEAPSLGKPVVNI---RDSGE 288 (346)
T ss_dssp --S-HH-----HHHHHHHHHTT-TTEEEE----HHHHHHHHHHESE--EEESSH--HHHHHGGGGT--EEEC---SSS-S
T ss_pred ecCCch-----HHHHHHHHhcccCCEEEECCCCHHHHHHHHhcceE--EEEcCc--cHHHHHHHhCCeEEEe---cCCCC
Confidence 875410 00112222211 37777776664 457778888 999999 777 999999999999 33333
Q ss_pred HHHHHHhhcceeeeeccCCcccccCCCCccccHHHHHHHHHHHhcCc
Q 044031 381 NSVALVQEMKVAMPMFLNGEEETIGNGEGVVSAERVEERVRELMMGS 427 (468)
Q Consensus 381 na~~~~~~~g~g~~~~~~~~~~~~~~~~~~~~~~~l~~av~~~l~~~ 427 (468)
.=.-. +. |..+.+. .+.++|.+++++++.+.
T Consensus 289 Rqe~r-~~-~~nvlv~--------------~~~~~I~~ai~~~l~~~ 319 (346)
T PF02350_consen 289 RQEGR-ER-GSNVLVG--------------TDPEAIIQAIEKALSDK 319 (346)
T ss_dssp -HHHH-HT-TSEEEET--------------SSHHHHHHHHHHHHH-H
T ss_pred CHHHH-hh-cceEEeC--------------CCHHHHHHHHHHHHhCh
Confidence 22222 23 6666654 68999999999999763
No 79
>cd03811 GT1_WabH_like This family is most closely related to the GT1 family of glycosyltransferases. WabH in Klebsiella pneumoniae has been shown to transfer a GlcNAc residue from UDP-GlcNAc onto the acceptor GalUA residue in the cellular outer core.
Probab=98.54 E-value=3.6e-05 Score=74.21 Aligned_cols=142 Identities=13% Similarity=0.103 Sum_probs=77.9
Q ss_pred ceEEeccCCCcC-CCHHHHHHHHHHHHhC--CCcEEEEEeCCCCccccCCChhHHhhc-cCCCeEecCCCCH-HhhhCcc
Q 044031 271 SVVFLCFGSRGT-FSAPQLKEIAIGLERS--NQRFLWVVRNPSNAAEAELPEGFLERT-KERGLVVKSWAPQ-STILGHE 345 (468)
Q Consensus 271 ~~v~vs~GS~~~-~~~~~~~~~~~al~~~--~~~~l~~~~~~~~~~~~~~~~~~~~~~-~~~~~~v~~~~pq-~~il~~~ 345 (468)
..+++..|+... ...+.+.+.+..+... +.+++++ |.... ...+ ....++. ...++.+.++.++ ..++..+
T Consensus 189 ~~~i~~~g~~~~~k~~~~~i~~~~~l~~~~~~~~l~i~-G~~~~--~~~~-~~~~~~~~~~~~v~~~g~~~~~~~~~~~~ 264 (353)
T cd03811 189 GPVILAVGRLSPQKGFDTLIRAFALLRKEGPDARLVIL-GDGPL--REEL-EALAKELGLADRVHFLGFQSNPYPYLKAA 264 (353)
T ss_pred ceEEEEEecchhhcChHHHHHHHHHhhhcCCCceEEEE-cCCcc--HHHH-HHHHHhcCCCccEEEecccCCHHHHHHhC
Confidence 367777788752 2223344444444432 4555544 43210 0000 0111111 2356777777664 3577788
Q ss_pred CcceEEec--CCcchHHHHHHhCCcEEecccccchhhHHHHHHhhcceeeeeccCCcccccCCCCccccHHHH---HHHH
Q 044031 346 SVGGFVTH--CGWSSVVEAVTYGVPMIAWPLYAEQFLNSVALVQEMKVAMPMFLNGEEETIGNGEGVVSAERV---EERV 420 (468)
Q Consensus 346 ~~~~~ith--gG~~s~~eal~~GvP~v~~P~~~DQ~~na~~~~~~~g~g~~~~~~~~~~~~~~~~~~~~~~~l---~~av 420 (468)
++-++-++ +..+++.||+++|+|+|+-... .....+. .-+.|+..+. -+.+.+ .+++
T Consensus 265 d~~i~ps~~e~~~~~~~Ea~~~G~PvI~~~~~----~~~e~i~-~~~~g~~~~~-------------~~~~~~~~~~~~i 326 (353)
T cd03811 265 DLFVLSSRYEGFPNVLLEAMALGTPVVATDCP----GPREILE-DGENGLLVPV-------------GDEAALAAAALAL 326 (353)
T ss_pred CEEEeCcccCCCCcHHHHHHHhCCCEEEcCCC----ChHHHhc-CCCceEEECC-------------CCHHHHHHHHHHH
Confidence 87332222 3356899999999999986543 4455564 3377888763 355566 5666
Q ss_pred HHHhcCch-hHHHHH
Q 044031 421 RELMMGSE-GKALRE 434 (468)
Q Consensus 421 ~~~l~~~~-~~~~~~ 434 (468)
..++.+++ .+++++
T Consensus 327 ~~~~~~~~~~~~~~~ 341 (353)
T cd03811 327 LDLLLDPELRERLAA 341 (353)
T ss_pred HhccCChHHHHHHHH
Confidence 66666664 344444
No 80
>TIGR02468 sucrsPsyn_pln sucrose phosphate synthase/possible sucrose phosphate phosphatase, plant. Members of this family are sucrose-phosphate synthases of plants. This enzyme is known to exist in multigene families in several species of both monocots and dicots. The N-terminal domain is the glucosyltransferase domain. Members of this family also have a variable linker region and a C-terminal domain that resembles sucrose phosphate phosphatase (SPP) (EC 3.1.3.24) (see TIGR01485), the next and final enzyme of sucrose biosynthesis. The SPP-like domain likely serves a binding and not a catalytic function, as the reported SPP is always encoded by a distinct protein.
Probab=98.53 E-value=7.8e-05 Score=80.34 Aligned_cols=161 Identities=11% Similarity=0.143 Sum_probs=92.2
Q ss_pred hhHHhhcCCCCCceEEeccCCCcCCCHHHHHHHHHHHHhCC-----CcEEEEEeCCCC-ccc----cCCChhHH---hhc
Q 044031 259 DCLTWLDSQPSGSVVFLCFGSRGTFSAPQLKEIAIGLERSN-----QRFLWVVRNPSN-AAE----AELPEGFL---ERT 325 (468)
Q Consensus 259 ~l~~~l~~~~~~~~v~vs~GS~~~~~~~~~~~~~~al~~~~-----~~~l~~~~~~~~-~~~----~~~~~~~~---~~~ 325 (468)
.+..|+.. +.+ ++++..|.+. +.+.+..+++|+.... ..+.+++|...+ +.. ...-..+. .+.
T Consensus 469 ~l~r~~~~-pdk-pvIL~VGRL~--p~KGi~~LIeAf~~L~~l~~~~nL~LIiG~gdd~d~l~~~~~~~l~~L~~li~~l 544 (1050)
T TIGR02468 469 EIMRFFTN-PRK-PMILALARPD--PKKNITTLVKAFGECRPLRELANLTLIMGNRDDIDEMSSGSSSVLTSVLKLIDKY 544 (1050)
T ss_pred HHHhhccc-CCC-cEEEEEcCCc--cccCHHHHHHHHHHhHhhccCCCEEEEEecCchhhhhhccchHHHHHHHHHHHHh
Confidence 45566654 333 4555567764 2333555666665432 234445564311 000 00001111 111
Q ss_pred -cCCCeEecCCCCHHhh---hCccC--cceEEec---CC-cchHHHHHHhCCcEEecccccchhhHHHHHHhhcceeeee
Q 044031 326 -KERGLVVKSWAPQSTI---LGHES--VGGFVTH---CG-WSSVVEAVTYGVPMIAWPLYAEQFLNSVALVQEMKVAMPM 395 (468)
Q Consensus 326 -~~~~~~v~~~~pq~~i---l~~~~--~~~~ith---gG-~~s~~eal~~GvP~v~~P~~~DQ~~na~~~~~~~g~g~~~ 395 (468)
....+.+.+++++.++ +..++ .++||.- =| -.+++||+++|+|+|+-...+ ....+. .-.-|+.+
T Consensus 545 gL~g~V~FlG~v~~edvp~lYr~Ad~s~DVFV~PS~~EgFGLvlLEAMAcGlPVVASdvGG----~~EII~-~g~nGlLV 619 (1050)
T TIGR02468 545 DLYGQVAYPKHHKQSDVPDIYRLAAKTKGVFINPAFIEPFGLTLIEAAAHGLPMVATKNGG----PVDIHR-VLDNGLLV 619 (1050)
T ss_pred CCCCeEEecCCCCHHHHHHHHHHhhhcCCeeeCCcccCCCCHHHHHHHHhCCCEEEeCCCC----cHHHhc-cCCcEEEE
Confidence 2355677788887653 43332 2347763 23 358999999999999987543 222332 32568877
Q ss_pred ccCCcccccCCCCccccHHHHHHHHHHHhcCch-hHHHHHHHHHHHH
Q 044031 396 FLNGEEETIGNGEGVVSAERVEERVRELMMGSE-GKALRERSLEMRM 441 (468)
Q Consensus 396 ~~~~~~~~~~~~~~~~~~~~l~~av~~~l~~~~-~~~~~~~a~~l~~ 441 (468)
++ -+.+.|+++|.++++|++ .++|.+++++..+
T Consensus 620 dP-------------~D~eaLA~AL~~LL~Dpelr~~m~~~gr~~v~ 653 (1050)
T TIGR02468 620 DP-------------HDQQAIADALLKLVADKQLWAECRQNGLKNIH 653 (1050)
T ss_pred CC-------------CCHHHHHHHHHHHhhCHHHHHHHHHHHHHHHH
Confidence 74 478899999999999986 6778877766543
No 81
>cd03807 GT1_WbnK_like This family is most closely related to the GT1 family of glycosyltransferases. WbnK in Shigella dysenteriae has been shown to be involved in the type 7 O-antigen biosynthesis.
Probab=98.50 E-value=0.00013 Score=70.73 Aligned_cols=88 Identities=18% Similarity=0.191 Sum_probs=58.1
Q ss_pred CCeEecCCCC-HHhhhCccCcceEEecCC----cchHHHHHHhCCcEEecccccchhhHHHHHHhhcceeeeeccCCccc
Q 044031 328 RGLVVKSWAP-QSTILGHESVGGFVTHCG----WSSVVEAVTYGVPMIAWPLYAEQFLNSVALVQEMKVAMPMFLNGEEE 402 (468)
Q Consensus 328 ~~~~v~~~~p-q~~il~~~~~~~~ithgG----~~s~~eal~~GvP~v~~P~~~DQ~~na~~~~~~~g~g~~~~~~~~~~ 402 (468)
.++.+.+... -..++..+++ +|.... .+++.||+++|+|+|+-.. ..+...+. . .|..++.
T Consensus 251 ~~v~~~g~~~~~~~~~~~adi--~v~ps~~e~~~~~~~Ea~a~g~PvI~~~~----~~~~e~~~-~--~g~~~~~----- 316 (365)
T cd03807 251 DKVILLGERSDVPALLNALDV--FVLSSLSEGFPNVLLEAMACGLPVVATDV----GDNAELVG-D--TGFLVPP----- 316 (365)
T ss_pred ceEEEccccccHHHHHHhCCE--EEeCCccccCCcHHHHHHhcCCCEEEcCC----CChHHHhh-c--CCEEeCC-----
Confidence 4555545433 3467777877 665443 4799999999999998654 33444443 2 5666653
Q ss_pred ccCCCCccccHHHHHHHHHHHhcCch-hHHHHHHHH
Q 044031 403 TIGNGEGVVSAERVEERVRELMMGSE-GKALRERSL 437 (468)
Q Consensus 403 ~~~~~~~~~~~~~l~~av~~~l~~~~-~~~~~~~a~ 437 (468)
-+.+++.+++.+++++++ .+++.++++
T Consensus 317 --------~~~~~l~~~i~~l~~~~~~~~~~~~~~~ 344 (365)
T cd03807 317 --------GDPEALAEAIEALLADPALRQALGEAAR 344 (365)
T ss_pred --------CCHHHHHHHHHHHHhChHHHHHHHHHHH
Confidence 368899999999999874 334444443
No 82
>PRK09922 UDP-D-galactose:(glucosyl)lipopolysaccharide-1,6-D-galactosyltransferase; Provisional
Probab=98.42 E-value=6e-05 Score=73.92 Aligned_cols=147 Identities=15% Similarity=0.162 Sum_probs=84.5
Q ss_pred eEEeccCCCcCCCHHHHHHHHHHHHhC--CCcEEEEEeCCCCccccCCChhHHhhccCCCeEecCCCCH--Hh---hhCc
Q 044031 272 VVFLCFGSRGTFSAPQLKEIAIGLERS--NQRFLWVVRNPSNAAEAELPEGFLERTKERGLVVKSWAPQ--ST---ILGH 344 (468)
Q Consensus 272 ~v~vs~GS~~~~~~~~~~~~~~al~~~--~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~pq--~~---il~~ 344 (468)
.+++..|.+.....+.+..+++++... +.+++ .+|.+.+ .+.+-+...+.-...++.+.+|.++ .. .+..
T Consensus 181 ~~i~~~Grl~~~~~k~~~~l~~a~~~~~~~~~l~-ivG~g~~--~~~l~~~~~~~~l~~~v~f~G~~~~~~~~~~~~~~~ 257 (359)
T PRK09922 181 AVFLYVGRLKFEGQKNVKELFDGLSQTTGEWQLH-IIGDGSD--FEKCKAYSRELGIEQRIIWHGWQSQPWEVVQQKIKN 257 (359)
T ss_pred cEEEEEEEEecccCcCHHHHHHHHHhhCCCeEEE-EEeCCcc--HHHHHHHHHHcCCCCeEEEecccCCcHHHHHHHHhc
Confidence 566677776532334456677777654 34444 4444310 1111111111112457888888753 32 3444
Q ss_pred cCcceEEe--c--CCcchHHHHHHhCCcEEecc-cccchhhHHHHHHhhcceeeeeccCCcccccCCCCccccHHHHHHH
Q 044031 345 ESVGGFVT--H--CGWSSVVEAVTYGVPMIAWP-LYAEQFLNSVALVQEMKVAMPMFLNGEEETIGNGEGVVSAERVEER 419 (468)
Q Consensus 345 ~~~~~~it--h--gG~~s~~eal~~GvP~v~~P-~~~DQ~~na~~~~~~~g~g~~~~~~~~~~~~~~~~~~~~~~~l~~a 419 (468)
+++ +|. + |-..++.||+++|+|+|+.- ..+ ....+. .-..|..++. -+.+++.++
T Consensus 258 ~d~--~v~~s~~Egf~~~~lEAma~G~Pvv~s~~~~g----~~eiv~-~~~~G~lv~~-------------~d~~~la~~ 317 (359)
T PRK09922 258 VSA--LLLTSKFEGFPMTLLEAMSYGIPCISSDCMSG----PRDIIK-PGLNGELYTP-------------GNIDEFVGK 317 (359)
T ss_pred CcE--EEECCcccCcChHHHHHHHcCCCEEEeCCCCC----hHHHcc-CCCceEEECC-------------CCHHHHHHH
Confidence 555 553 3 22579999999999999875 332 223443 3256777764 588999999
Q ss_pred HHHHhcCch---hHHHHHHHHHHHH
Q 044031 420 VRELMMGSE---GKALRERSLEMRM 441 (468)
Q Consensus 420 v~~~l~~~~---~~~~~~~a~~l~~ 441 (468)
|.++++|++ ...++++++++..
T Consensus 318 i~~l~~~~~~~~~~~~~~~~~~~~~ 342 (359)
T PRK09922 318 LNKVISGEVKYQHDAIPNSIERFYE 342 (359)
T ss_pred HHHHHhCcccCCHHHHHHHHHHhhH
Confidence 999999985 3445555555444
No 83
>TIGR03088 stp2 sugar transferase, PEP-CTERM/EpsH1 system associated. Members of this family include a match to the pfam00534 Glycosyl transferases group 1 domain. Nearly all are found in species that encode the PEP-CTERM/exosortase system predicted to act in protein sorting in a number of Gram-negative bacteria. In particular, these transferases are found proximal to a particular variant of exosortase, EpsH1, which appears to travel with a conserved group of genes summarized by Genome Property GenProp0652. The nature of the sugar transferase reaction catalyzed by members of this clade is unknown and may conceivably be variable with respect to substrate by species, but we hypothesize a conserved substrate.
Probab=98.40 E-value=0.00036 Score=68.80 Aligned_cols=91 Identities=12% Similarity=0.059 Sum_probs=61.1
Q ss_pred CeEecCCCC-HHhhhCccCcceEE--ec--CCcchHHHHHHhCCcEEecccccchhhHHHHHHhhcceeeeeccCCcccc
Q 044031 329 GLVVKSWAP-QSTILGHESVGGFV--TH--CGWSSVVEAVTYGVPMIAWPLYAEQFLNSVALVQEMKVAMPMFLNGEEET 403 (468)
Q Consensus 329 ~~~v~~~~p-q~~il~~~~~~~~i--th--gG~~s~~eal~~GvP~v~~P~~~DQ~~na~~~~~~~g~g~~~~~~~~~~~ 403 (468)
++.+.++.. -..++..+++ +| ++ |-.+++.||+++|+|+|+-...+ +...+. .-..|..++.
T Consensus 256 ~v~~~g~~~~~~~~~~~adi--~v~pS~~Eg~~~~~lEAma~G~Pvv~s~~~g----~~e~i~-~~~~g~~~~~------ 322 (374)
T TIGR03088 256 LVWLPGERDDVPALMQALDL--FVLPSLAEGISNTILEAMASGLPVIATAVGG----NPELVQ-HGVTGALVPP------ 322 (374)
T ss_pred eEEEcCCcCCHHHHHHhcCE--EEeccccccCchHHHHHHHcCCCEEEcCCCC----cHHHhc-CCCceEEeCC------
Confidence 444444433 3467888887 55 33 33569999999999999976543 444453 3256777763
Q ss_pred cCCCCccccHHHHHHHHHHHhcCch-hHHHHHHHHHH
Q 044031 404 IGNGEGVVSAERVEERVRELMMGSE-GKALRERSLEM 439 (468)
Q Consensus 404 ~~~~~~~~~~~~l~~av~~~l~~~~-~~~~~~~a~~l 439 (468)
-+.+++.++|.++++|++ ..++.+++++.
T Consensus 323 -------~d~~~la~~i~~l~~~~~~~~~~~~~a~~~ 352 (374)
T TIGR03088 323 -------GDAVALARALQPYVSDPAARRAHGAAGRAR 352 (374)
T ss_pred -------CCHHHHHHHHHHHHhCHHHHHHHHHHHHHH
Confidence 477899999999998874 44555555543
No 84
>cd04951 GT1_WbdM_like This family is most closely related to the GT1 family of glycosyltransferases and is named after WbdM in Escherichia coli. In general glycosyltransferases catalyze the transfer of sugar moieties from activated donor molecules to specific acceptor molecules, forming glycosidic bonds. The acceptor molecule can be a lipid, a protein, a heterocyclic compound, or another carbohydrate residue. This group of glycosyltransferases is most closely related to the previously defined glycosyltransferase family 1 (GT1). The members of this family may transfer UDP, ADP, GDP, or CMP linked sugars. The diverse enzymatic activities among members of this family reflect a wide range of biological functions. The protein structure available for this family has the GTB topology, one of the two protein topologies observed for nucleotide-sugar-dependent glycosyltransferases. GTB proteins have distinct N- and C- terminal domains each containing a typical Rossmann fold. The two domains have
Probab=98.37 E-value=0.00023 Score=69.38 Aligned_cols=127 Identities=14% Similarity=0.124 Sum_probs=73.1
Q ss_pred ceEEeccCCCcC-CCHHHHHHHHHHHHh--CCCcEEEEEeCCCCccccCCChhHHh---hc-cCCCeEecCCCCH-Hhhh
Q 044031 271 SVVFLCFGSRGT-FSAPQLKEIAIGLER--SNQRFLWVVRNPSNAAEAELPEGFLE---RT-KERGLVVKSWAPQ-STIL 342 (468)
Q Consensus 271 ~~v~vs~GS~~~-~~~~~~~~~~~al~~--~~~~~l~~~~~~~~~~~~~~~~~~~~---~~-~~~~~~v~~~~pq-~~il 342 (468)
..+++..|+... ...+.+.+.+..+.. .+.+++++-.+. ..+.+.. .. ...++.+.++..+ ..++
T Consensus 188 ~~~~l~~g~~~~~kg~~~li~a~~~l~~~~~~~~l~i~G~g~-------~~~~~~~~~~~~~~~~~v~~~g~~~~~~~~~ 260 (360)
T cd04951 188 TFVILAVGRLVEAKDYPNLLKAFAKLLSDYLDIKLLIAGDGP-------LRATLERLIKALGLSNRVKLLGLRDDIAAYY 260 (360)
T ss_pred CEEEEEEeeCchhcCcHHHHHHHHHHHhhCCCeEEEEEcCCC-------cHHHHHHHHHhcCCCCcEEEecccccHHHHH
Confidence 367777787742 222333333333332 256776654332 1112211 11 2346777676653 4677
Q ss_pred CccCcceEEecC----CcchHHHHHHhCCcEEecccccchhhHHHHHHhhcceeeeeccCCcccccCCCCccccHHHHHH
Q 044031 343 GHESVGGFVTHC----GWSSVVEAVTYGVPMIAWPLYAEQFLNSVALVQEMKVAMPMFLNGEEETIGNGEGVVSAERVEE 418 (468)
Q Consensus 343 ~~~~~~~~ithg----G~~s~~eal~~GvP~v~~P~~~DQ~~na~~~~~~~g~g~~~~~~~~~~~~~~~~~~~~~~~l~~ 418 (468)
..+++ +|.-. ..+++.||+++|+|+|+- |...+...+.+ .|..+.. -+.+++.+
T Consensus 261 ~~ad~--~v~~s~~e~~~~~~~Ea~a~G~PvI~~----~~~~~~e~i~~---~g~~~~~-------------~~~~~~~~ 318 (360)
T cd04951 261 NAADL--FVLSSAWEGFGLVVAEAMACELPVVAT----DAGGVREVVGD---SGLIVPI-------------SDPEALAN 318 (360)
T ss_pred Hhhce--EEecccccCCChHHHHHHHcCCCEEEe----cCCChhhEecC---CceEeCC-------------CCHHHHHH
Confidence 77777 44432 256899999999999975 34445555532 4444442 47889999
Q ss_pred HHHHHhcC
Q 044031 419 RVRELMMG 426 (468)
Q Consensus 419 av~~~l~~ 426 (468)
++.+++++
T Consensus 319 ~i~~ll~~ 326 (360)
T cd04951 319 KIDEILKM 326 (360)
T ss_pred HHHHHHhC
Confidence 99999853
No 85
>cd03812 GT1_CapH_like This family is most closely related to the GT1 family of glycosyltransferases. capH in Staphylococcus aureus has been shown to be required for the biosynthesis of the type 1 capsular polysaccharide (CP1).
Probab=98.37 E-value=0.00037 Score=67.95 Aligned_cols=136 Identities=21% Similarity=0.121 Sum_probs=76.8
Q ss_pred ceEEeccCCCcC-CCHHHHHHHHHHHHhC--CCcEEEEEeCCCCccccCCChhHHhhccCCCeEecCCCCH-HhhhCccC
Q 044031 271 SVVFLCFGSRGT-FSAPQLKEIAIGLERS--NQRFLWVVRNPSNAAEAELPEGFLERTKERGLVVKSWAPQ-STILGHES 346 (468)
Q Consensus 271 ~~v~vs~GS~~~-~~~~~~~~~~~al~~~--~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~pq-~~il~~~~ 346 (468)
..+++..|++.. ...+.+.+.+..|... +.+++++ |.... ...+-..........++.+.++..+ ..++..++
T Consensus 192 ~~~i~~vGr~~~~Kg~~~li~a~~~l~~~~~~~~l~iv-G~g~~--~~~~~~~~~~~~~~~~v~~~g~~~~~~~~~~~ad 268 (358)
T cd03812 192 KFVIGHVGRFSEQKNHEFLIEIFAELLKKNPNAKLLLV-GDGEL--EEEIKKKVKELGLEDKVIFLGVRNDVPELLQAMD 268 (358)
T ss_pred CEEEEEEeccccccChHHHHHHHHHHHHhCCCeEEEEE-eCCch--HHHHHHHHHhcCCCCcEEEecccCCHHHHHHhcC
Confidence 366677788752 2334444555555432 4455544 43310 0001011111112356666676433 46777777
Q ss_pred cceEEec--CCcchHHHHHHhCCcEEecccccchhhHHHHHHhhcceeeeeccCCcccccCCCCccccHHHHHHHHHHHh
Q 044031 347 VGGFVTH--CGWSSVVEAVTYGVPMIAWPLYAEQFLNSVALVQEMKVAMPMFLNGEEETIGNGEGVVSAERVEERVRELM 424 (468)
Q Consensus 347 ~~~~ith--gG~~s~~eal~~GvP~v~~P~~~DQ~~na~~~~~~~g~g~~~~~~~~~~~~~~~~~~~~~~~l~~av~~~l 424 (468)
+.++-+. |-.++++||+++|+|+|+-...+ ....+ +. +.+..... -+.++++++|.+++
T Consensus 269 i~v~ps~~E~~~~~~lEAma~G~PvI~s~~~~----~~~~i-~~-~~~~~~~~-------------~~~~~~a~~i~~l~ 329 (358)
T cd03812 269 VFLFPSLYEGLPLVLIEAQASGLPCILSDTIT----KEVDL-TD-LVKFLSLD-------------ESPEIWAEEILKLK 329 (358)
T ss_pred EEEecccccCCCHHHHHHHHhCCCEEEEcCCc----hhhhh-cc-CccEEeCC-------------CCHHHHHHHHHHHH
Confidence 7322222 44679999999999999876544 23334 34 55555542 35799999999999
Q ss_pred cCch
Q 044031 425 MGSE 428 (468)
Q Consensus 425 ~~~~ 428 (468)
+|++
T Consensus 330 ~~~~ 333 (358)
T cd03812 330 SEDR 333 (358)
T ss_pred hCcc
Confidence 9984
No 86
>cd03802 GT1_AviGT4_like This family is most closely related to the GT1 family of glycosyltransferases. aviGT4 in Streptomyces viridochromogenes has been shown to be involved in biosynthesis of oligosaccharide antibiotic avilamycin A. Inactivation of aviGT4 resulted in a mutant that accumulated a novel avilamycin derivative lacking the terminal eurekanate residue.
Probab=98.31 E-value=0.00051 Score=66.29 Aligned_cols=128 Identities=12% Similarity=0.002 Sum_probs=76.2
Q ss_pred EEeccCCCcCCCHHHHHHHHHHHHhCCCcEEEEEeCCCCccccCCChhHHhhc--cCCCeEecCCCCHHh---hhCccCc
Q 044031 273 VFLCFGSRGTFSAPQLKEIAIGLERSNQRFLWVVRNPSNAAEAELPEGFLERT--KERGLVVKSWAPQST---ILGHESV 347 (468)
Q Consensus 273 v~vs~GS~~~~~~~~~~~~~~al~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~--~~~~~~v~~~~pq~~---il~~~~~ 347 (468)
+.+..|... ..+....++++++..+.++++.-..... . ......... ..+++.+.+++++.+ +++.+++
T Consensus 173 ~i~~~Gr~~--~~Kg~~~li~~~~~~~~~l~i~G~~~~~---~-~~~~~~~~~~~~~~~v~~~G~~~~~~~~~~~~~~d~ 246 (335)
T cd03802 173 YLLFLGRIS--PEKGPHLAIRAARRAGIPLKLAGPVSDP---D-YFYREIAPELLDGPDIEYLGEVGGAEKAELLGNARA 246 (335)
T ss_pred EEEEEEeec--cccCHHHHHHHHHhcCCeEEEEeCCCCH---H-HHHHHHHHhcccCCcEEEeCCCCHHHHHHHHHhCcE
Confidence 444457763 2334556777888888886654333210 0 001111111 246788889999754 5777777
Q ss_pred ceEEec--CC-cchHHHHHHhCCcEEecccccchhhHHHHHHhhcceeeeeccCCcccccCCCCccccHHHHHHHHHHHh
Q 044031 348 GGFVTH--CG-WSSVVEAVTYGVPMIAWPLYAEQFLNSVALVQEMKVAMPMFLNGEEETIGNGEGVVSAERVEERVRELM 424 (468)
Q Consensus 348 ~~~ith--gG-~~s~~eal~~GvP~v~~P~~~DQ~~na~~~~~~~g~g~~~~~~~~~~~~~~~~~~~~~~~l~~av~~~l 424 (468)
-++-+. -| ..++.||+++|+|+|+-...+ +...+ +.-..|...+ . .+++.+++.+++
T Consensus 247 ~v~ps~~~E~~~~~~lEAma~G~PvI~~~~~~----~~e~i-~~~~~g~l~~--------------~-~~~l~~~l~~l~ 306 (335)
T cd03802 247 LLFPILWEEPFGLVMIEAMACGTPVIAFRRGA----VPEVV-EDGVTGFLVD--------------S-VEELAAAVARAD 306 (335)
T ss_pred EEeCCcccCCcchHHHHHHhcCCCEEEeCCCC----chhhe-eCCCcEEEeC--------------C-HHHHHHHHHHHh
Confidence 333332 34 348999999999999876532 33344 3313566664 2 778999998886
Q ss_pred cC
Q 044031 425 MG 426 (468)
Q Consensus 425 ~~ 426 (468)
..
T Consensus 307 ~~ 308 (335)
T cd03802 307 RL 308 (335)
T ss_pred cc
Confidence 53
No 87
>cd04955 GT1_like_6 This family is most closely related to the GT1 family of glycosyltransferases. Glycosyltransferases catalyze the transfer of sugar moieties from activated donor molecules to specific acceptor molecules, forming glycosidic bonds. The acceptor molecule can be a lipid, a protein, a heterocyclic compound, or another carbohydrate residue. This group of glycosyltransferases is most closely related to the previously defined glycosyltransferase family 1 (GT1). The members of this family may transfer UDP, ADP, GDP, or CMP linked sugars. The diverse enzymatic activities among members of this family reflect a wide range of biological functions. The protein structure available for this family has the GTB topology, one of the two protein topologies observed for nucleotide-sugar-dependent glycosyltransferases. GTB proteins have distinct N- and C- terminal domains each containing a typical Rossmann fold. The two domains have high structural homology despite minimal sequence homolog
Probab=98.31 E-value=0.001 Score=64.94 Aligned_cols=155 Identities=15% Similarity=0.182 Sum_probs=81.9
Q ss_pred EeccCCCcCCCHHHHHHHHHHHHhC--CCcEEEEEeCCCCccccCCChhHH-hhccCCCeEecCCCCHHh---hhCccCc
Q 044031 274 FLCFGSRGTFSAPQLKEIAIGLERS--NQRFLWVVRNPSNAAEAELPEGFL-ERTKERGLVVKSWAPQST---ILGHESV 347 (468)
Q Consensus 274 ~vs~GS~~~~~~~~~~~~~~al~~~--~~~~l~~~~~~~~~~~~~~~~~~~-~~~~~~~~~v~~~~pq~~---il~~~~~ 347 (468)
++..|++.. .+.+..++++++.. +.++++ +|.... ...+-+.+. .....+++.+.+++++.+ .+..+++
T Consensus 196 i~~~G~~~~--~Kg~~~li~a~~~l~~~~~l~i-vG~~~~--~~~~~~~~~~~~~~~~~V~~~g~~~~~~~~~~~~~ad~ 270 (363)
T cd04955 196 YLLVGRIVP--ENNIDDLIEAFSKSNSGKKLVI-VGNADH--NTPYGKLLKEKAAADPRIIFVGPIYDQELLELLRYAAL 270 (363)
T ss_pred EEEEecccc--cCCHHHHHHHHHhhccCceEEE-EcCCCC--cchHHHHHHHHhCCCCcEEEccccChHHHHHHHHhCCE
Confidence 445688752 23344556666554 355544 444210 011111112 112346888889999865 4555555
Q ss_pred ceEEecCCc-----chHHHHHHhCCcEEecccccchhhHHHHHHhhcceeeeeccCCcccccCCCCccccHHHHHHHHHH
Q 044031 348 GGFVTHCGW-----SSVVEAVTYGVPMIAWPLYAEQFLNSVALVQEMKVAMPMFLNGEEETIGNGEGVVSAERVEERVRE 422 (468)
Q Consensus 348 ~~~ithgG~-----~s~~eal~~GvP~v~~P~~~DQ~~na~~~~~~~g~g~~~~~~~~~~~~~~~~~~~~~~~l~~av~~ 422 (468)
++.+.-. +++.||+++|+|+|+....+. ...+ + ..|..... . + .+.+++.+
T Consensus 271 --~v~ps~~~e~~~~~~~EAma~G~PvI~s~~~~~----~e~~-~--~~g~~~~~--------~-----~--~l~~~i~~ 326 (363)
T cd04955 271 --FYLHGHSVGGTNPSLLEAMAYGCPVLASDNPFN----REVL-G--DKAIYFKV--------G-----D--DLASLLEE 326 (363)
T ss_pred --EEeCCccCCCCChHHHHHHHcCCCEEEecCCcc----ceee-c--CCeeEecC--------c-----h--HHHHHHHH
Confidence 5443322 479999999999999765432 1222 1 12333331 1 1 29999999
Q ss_pred HhcCch-hHHHHHHHHHHHHHHHHhhcCCCCCChHHHHHHHHHHh
Q 044031 423 LMMGSE-GKALRERSLEMRMMAATAWNNNDGGSSFTAFSNLFDLW 466 (468)
Q Consensus 423 ~l~~~~-~~~~~~~a~~l~~~~~~a~~~~~~g~~~~~~~~~~~~~ 466 (468)
+++|++ ..++.+++++.. . +.=+.....+++++.+
T Consensus 327 l~~~~~~~~~~~~~~~~~~-------~--~~fs~~~~~~~~~~~y 362 (363)
T cd04955 327 LEADPEEVSAMAKAARERI-------R--EKYTWEKIADQYEELY 362 (363)
T ss_pred HHhCHHHHHHHHHHHHHHH-------H--HhCCHHHHHHHHHHHh
Confidence 999874 344444444322 2 2234445555555543
No 88
>PRK01021 lpxB lipid-A-disaccharide synthase; Reviewed
Probab=98.30 E-value=0.0008 Score=68.41 Aligned_cols=188 Identities=15% Similarity=0.135 Sum_probs=99.8
Q ss_pred CCeeEecccccCCcCCCCCCCCCCcchhHHhhcCCCCCceEEeccCCCcCCCHHHHHHHHHHHH--h--CCCcEEEEEeC
Q 044031 233 PPLHCIGPLIVDAKDRAGGVSDDVSSDCLTWLDSQPSGSVVFLCFGSRGTFSAPQLKEIAIGLE--R--SNQRFLWVVRN 308 (468)
Q Consensus 233 p~~~~VGpl~~~~~~~~~~~~~~~~~~l~~~l~~~~~~~~v~vs~GS~~~~~~~~~~~~~~al~--~--~~~~~l~~~~~ 308 (468)
-++.+||=.+.+.. +... ...+..+-++-.+++++|-+--||-.+.=...+..++++.+ . .+.+|+...-.
T Consensus 381 v~v~yVGHPL~d~i-~~~~----~~~~~r~~lgl~~~~~iIaLLPGSR~~EI~rllPv~l~aa~~~~l~~~l~fvvp~a~ 455 (608)
T PRK01021 381 LRTVYLGHPLVETI-SSFS----PNLSWKEQLHLPSDKPIVAAFPGSRRGDILRNLTIQVQAFLASSLASTHQLLVSSAN 455 (608)
T ss_pred CCeEEECCcHHhhc-ccCC----CHHHHHHHcCCCCCCCEEEEECCCCHHHHHHHHHHHHHHHHHHHhccCeEEEEecCc
Confidence 68999995444332 1101 22333333333345569999999985332333444555555 2 24556554322
Q ss_pred CCCccccCCChhHHhhccCCC---e-EecCCCCHHhhhCccCcceEEecCCcchHHHHHHhCCcEEecccc-cchhhHHH
Q 044031 309 PSNAAEAELPEGFLERTKERG---L-VVKSWAPQSTILGHESVGGFVTHCGWSSVVEAVTYGVPMIAWPLY-AEQFLNSV 383 (468)
Q Consensus 309 ~~~~~~~~~~~~~~~~~~~~~---~-~v~~~~pq~~il~~~~~~~~ithgG~~s~~eal~~GvP~v~~P~~-~DQ~~na~ 383 (468)
.. ..+.+.+.....+ + ++.+- ...+++..+++ .+.-+| ..|+|+..+|+|||++=-. .=-+..++
T Consensus 456 ~~------~~~~i~~~~~~~~~~~~~ii~~~-~~~~~m~aaD~--aLaaSG-TaTLEaAL~g~PmVV~YK~s~Lty~Iak 525 (608)
T PRK01021 456 PK------YDHLILEVLQQEGCLHSHIVPSQ-FRYELMRECDC--ALAKCG-TIVLETALNQTPTIVTCQLRPFDTFLAK 525 (608)
T ss_pred hh------hHHHHHHHHhhcCCCCeEEecCc-chHHHHHhcCe--eeecCC-HHHHHHHHhCCCEEEEEecCHHHHHHHH
Confidence 20 0011222121111 1 22121 12467877887 888777 5678999999999986321 12344566
Q ss_pred HHHhh--ccee-------eeeccCCccccc--CCCCccccHHHHHHHHHHHhcCch-hHHHHHHHHHHHHHH
Q 044031 384 ALVQE--MKVA-------MPMFLNGEEETI--GNGEGVVSAERVEERVRELMMGSE-GKALRERSLEMRMMA 443 (468)
Q Consensus 384 ~~~~~--~g~g-------~~~~~~~~~~~~--~~~~~~~~~~~l~~av~~~l~~~~-~~~~~~~a~~l~~~~ 443 (468)
++.+. -=+| ..+-+ |-- .++ +|++.|.+++ ++|.|++ .+++++..+++++.+
T Consensus 526 ~Lvki~i~yIsLpNIIagr~VvP----EllqgQ~~---~tpe~La~~l-~lL~d~~~r~~~~~~l~~lr~~L 589 (608)
T PRK01021 526 YIFKIILPAYSLPNIILGSTIFP----EFIGGKKD---FQPEEVAAAL-DILKTSQSKEKQKDACRDLYQAM 589 (608)
T ss_pred HHHhccCCeeehhHHhcCCCcch----hhcCCccc---CCHHHHHHHH-HHhcCHHHHHHHHHHHHHHHHHh
Confidence 66531 0111 11111 111 134 8999999997 8888874 566666666666644
No 89
>TIGR02149 glgA_Coryne glycogen synthase, Corynebacterium family. This model describes Corynebacterium glutamicum GlgA and closely related proteins in several other species. This enzyme is required for glycogen biosynthesis and appears to replace the distantly related TIGR02095 family of ADP-glucose type glycogen synthase in Corynebacterium glutamicum, Mycobacterium tuberculosis, Bifidobacterium longum, and Streptomyces coelicolor.
Probab=98.27 E-value=0.0019 Score=63.81 Aligned_cols=148 Identities=14% Similarity=0.172 Sum_probs=83.7
Q ss_pred eEEeccCCCcCCCHHHHHHHHHHHHhC--CCcEEEEEeCCCCccccCCChhHHhhc----c-CCCeE-ecCCCCHH---h
Q 044031 272 VVFLCFGSRGTFSAPQLKEIAIGLERS--NQRFLWVVRNPSNAAEAELPEGFLERT----K-ERGLV-VKSWAPQS---T 340 (468)
Q Consensus 272 ~v~vs~GS~~~~~~~~~~~~~~al~~~--~~~~l~~~~~~~~~~~~~~~~~~~~~~----~-~~~~~-v~~~~pq~---~ 340 (468)
++++..|.+.. .+.+..++++++.. +..+++..++... ..+-+.+.+.. . ..+++ +.+++++. .
T Consensus 202 ~~i~~~Grl~~--~Kg~~~li~a~~~l~~~~~l~i~g~g~~~---~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~ 276 (388)
T TIGR02149 202 PYILFVGRITR--QKGVPHLLDAVHYIPKDVQVVLCAGAPDT---PEVAEEVRQAVALLDRNRTGIIWINKMLPKEELVE 276 (388)
T ss_pred eEEEEEccccc--ccCHHHHHHHHHHHhhcCcEEEEeCCCCc---HHHHHHHHHHHHHhccccCceEEecCCCCHHHHHH
Confidence 55666677752 23345556666553 4566555444311 00111111111 1 12344 34677754 3
Q ss_pred hhCccCcceEEec----CCcchHHHHHHhCCcEEecccccchhhHHHHHHhhcceeeeeccCCcccccCCC-CccccHHH
Q 044031 341 ILGHESVGGFVTH----CGWSSVVEAVTYGVPMIAWPLYAEQFLNSVALVQEMKVAMPMFLNGEEETIGNG-EGVVSAER 415 (468)
Q Consensus 341 il~~~~~~~~ith----gG~~s~~eal~~GvP~v~~P~~~DQ~~na~~~~~~~g~g~~~~~~~~~~~~~~~-~~~~~~~~ 415 (468)
++.++++ +|.= +...++.||+++|+|+|+.... .....+.+. +.|..++. .+ +..-..+.
T Consensus 277 ~~~~aDv--~v~ps~~e~~g~~~lEA~a~G~PvI~s~~~----~~~e~i~~~-~~G~~~~~--------~~~~~~~~~~~ 341 (388)
T TIGR02149 277 LLSNAEV--FVCPSIYEPLGIVNLEAMACGTPVVASATG----GIPEVVVDG-ETGFLVPP--------DNSDADGFQAE 341 (388)
T ss_pred HHHhCCE--EEeCCccCCCChHHHHHHHcCCCEEEeCCC----CHHHHhhCC-CceEEcCC--------CCCcccchHHH
Confidence 5777777 6542 2245779999999999997653 344555433 67888764 11 00112389
Q ss_pred HHHHHHHHhcCch-hHHHHHHHHHH
Q 044031 416 VEERVRELMMGSE-GKALRERSLEM 439 (468)
Q Consensus 416 l~~av~~~l~~~~-~~~~~~~a~~l 439 (468)
+.++|.++++|++ .++|.+++++.
T Consensus 342 l~~~i~~l~~~~~~~~~~~~~a~~~ 366 (388)
T TIGR02149 342 LAKAINILLADPELAKKMGIAGRKR 366 (388)
T ss_pred HHHHHHHHHhCHHHHHHHHHHHHHH
Confidence 9999999999885 45666666553
No 90
>TIGR03568 NeuC_NnaA UDP-N-acetyl-D-glucosamine 2-epimerase, UDP-hydrolysing. This family of enzymes catalyzes the combined epimerization and UDP-hydrolysis of UDP-N-acetylglucosamine to N-acetylmannosamine. This is in contrast to the related enzyme WecB (TIGR00236) which retains the UDP moiety. NeuC acts in concert with NeuA and NeuB to synthesize CMP-N5-acetyl-neuraminate.
Probab=98.27 E-value=0.00019 Score=70.30 Aligned_cols=163 Identities=13% Similarity=0.134 Sum_probs=90.9
Q ss_pred CCeeEecccccCCcCCCCCCCCCCcchhHHhhcCCCCCceEEeccCCCc---CCCHHHHHHHHHHHHhCCCcEEEEEeCC
Q 044031 233 PPLHCIGPLIVDAKDRAGGVSDDVSSDCLTWLDSQPSGSVVFLCFGSRG---TFSAPQLKEIAIGLERSNQRFLWVVRNP 309 (468)
Q Consensus 233 p~~~~VGpl~~~~~~~~~~~~~~~~~~l~~~l~~~~~~~~v~vs~GS~~---~~~~~~~~~~~~al~~~~~~~l~~~~~~ 309 (468)
.+++.+|....+....... ....++.+.+.-.++++.|+|++=... ....+.+.+++++|...+.++++.....
T Consensus 167 ~~i~~tG~~~iD~l~~~~~---~~~~~~~~~lgl~~~~~~vlvt~Hp~~~~~~~~~~~l~~li~~L~~~~~~~~vi~P~~ 243 (365)
T TIGR03568 167 DRVFNVGSPGLDNILSLDL---LSKEELEEKLGIDLDKPYALVTFHPVTLEKESAEEQIKELLKALDELNKNYIFTYPNA 243 (365)
T ss_pred CcEEEECCcHHHHHHhhhc---cCHHHHHHHhCCCCCCCEEEEEeCCCcccccCchHHHHHHHHHHHHhccCCEEEEeCC
Confidence 4688888765443210000 022333333332223348777775432 3345778899999988776655554322
Q ss_pred CCccccCCChhHHhhcc-CCCeEecCCCC---HHhhhCccCcceEEecCCcchHHHHHHhCCcEEecccccchhhHHHHH
Q 044031 310 SNAAEAELPEGFLERTK-ERGLVVKSWAP---QSTILGHESVGGFVTHCGWSSVVEAVTYGVPMIAWPLYAEQFLNSVAL 385 (468)
Q Consensus 310 ~~~~~~~~~~~~~~~~~-~~~~~v~~~~p---q~~il~~~~~~~~ithgG~~s~~eal~~GvP~v~~P~~~DQ~~na~~~ 385 (468)
+ +....+-+.+.+... .+++.+.+.++ ...++.++++ +||-.+.+- .||.+.|+|+|.+- +.+. -+
T Consensus 244 ~-p~~~~i~~~i~~~~~~~~~v~l~~~l~~~~~l~Ll~~a~~--vitdSSggi-~EA~~lg~Pvv~l~---~R~e---~~ 313 (365)
T TIGR03568 244 D-AGSRIINEAIEEYVNEHPNFRLFKSLGQERYLSLLKNADA--VIGNSSSGI-IEAPSFGVPTINIG---TRQK---GR 313 (365)
T ss_pred C-CCchHHHHHHHHHhcCCCCEEEECCCChHHHHHHHHhCCE--EEEcChhHH-HhhhhcCCCEEeec---CCch---hh
Confidence 0 001011111222112 35777776655 4457778888 998875444 99999999999773 3221 11
Q ss_pred Hhhcceeee-eccCCcccccCCCCccccHHHHHHHHHHHh
Q 044031 386 VQEMKVAMP-MFLNGEEETIGNGEGVVSAERVEERVRELM 424 (468)
Q Consensus 386 ~~~~g~g~~-~~~~~~~~~~~~~~~~~~~~~l~~av~~~l 424 (468)
+. |..+. +. .+.++|.+++.+++
T Consensus 314 -~~-g~nvl~vg--------------~~~~~I~~a~~~~~ 337 (365)
T TIGR03568 314 -LR-ADSVIDVD--------------PDKEEIVKAIEKLL 337 (365)
T ss_pred -hh-cCeEEEeC--------------CCHHHHHHHHHHHh
Confidence 22 43333 33 57889999999954
No 91
>TIGR03087 stp1 sugar transferase, PEP-CTERM/EpsH1 system associated. Members of this family include a match to the pfam00534 Glycosyl transferases group 1 domain. Nearly all are found in species that encode the PEP-CTERM/exosortase system predicted to act in protein sorting in a number of Gram-negative bacteria. In particular, these transferases are found proximal to a particular variant of exosortase, EpsH1, which appears to travel with a conserved group of genes summarized by Genome Property GenProp0652. The nature of the sugar transferase reaction catalyzed by members of this clade is unknown and may conceivably be variable with respect to substrate by species, but we hypothesize a conserved substrate.
Probab=98.24 E-value=0.0009 Score=66.60 Aligned_cols=95 Identities=17% Similarity=0.171 Sum_probs=64.6
Q ss_pred cCCCeEecCCCCHH-hhhCccCcceEEec--CCc-chHHHHHHhCCcEEecccccchhhHHHHHHhhcceeeeeccCCcc
Q 044031 326 KERGLVVKSWAPQS-TILGHESVGGFVTH--CGW-SSVVEAVTYGVPMIAWPLYAEQFLNSVALVQEMKVAMPMFLNGEE 401 (468)
Q Consensus 326 ~~~~~~v~~~~pq~-~il~~~~~~~~ith--gG~-~s~~eal~~GvP~v~~P~~~DQ~~na~~~~~~~g~g~~~~~~~~~ 401 (468)
...++.+.+++++. .++.++++-++-++ .|. +.+.||+++|+|+|+.+...+.. .... |.|+.+.
T Consensus 278 ~~~~V~~~G~v~~~~~~~~~adv~v~Ps~~~eG~~~~~lEAma~G~PVV~t~~~~~~i-----~~~~-~~g~lv~----- 346 (397)
T TIGR03087 278 ALPGVTVTGSVADVRPYLAHAAVAVAPLRIARGIQNKVLEAMAMAKPVVASPEAAEGI-----DALP-GAELLVA----- 346 (397)
T ss_pred cCCCeEEeeecCCHHHHHHhCCEEEecccccCCcccHHHHHHHcCCCEEecCcccccc-----cccC-CcceEeC-----
Confidence 35678888888843 56777887332243 343 36999999999999988643221 1122 5666554
Q ss_pred cccCCCCccccHHHHHHHHHHHhcCch-hHHHHHHHHHHH
Q 044031 402 ETIGNGEGVVSAERVEERVRELMMGSE-GKALRERSLEMR 440 (468)
Q Consensus 402 ~~~~~~~~~~~~~~l~~av~~~l~~~~-~~~~~~~a~~l~ 440 (468)
-+.+++.++|.++++|++ .++|.+++++..
T Consensus 347 ---------~~~~~la~ai~~ll~~~~~~~~~~~~ar~~v 377 (397)
T TIGR03087 347 ---------ADPADFAAAILALLANPAEREELGQAARRRV 377 (397)
T ss_pred ---------CCHHHHHHHHHHHHcCHHHHHHHHHHHHHHH
Confidence 478899999999999885 566666666543
No 92
>cd03809 GT1_mtfB_like This family is most closely related to the GT1 family of glycosyltransferases. mtfB (mannosyltransferase B) in E. coli has been shown to direct the growth of the O9-specific polysaccharide chain. It transfers two mannoses into the position 3 of the previously synthesized polysaccharide.
Probab=98.15 E-value=0.00072 Score=65.82 Aligned_cols=145 Identities=18% Similarity=0.155 Sum_probs=80.8
Q ss_pred eEEeccCCCcC-CCHHHHHHHHHHHHhCC--CcEEEEEeCCCCccccCCChhHHhhccCCCeEecCCCCHHh---hhCcc
Q 044031 272 VVFLCFGSRGT-FSAPQLKEIAIGLERSN--QRFLWVVRNPSNAAEAELPEGFLERTKERGLVVKSWAPQST---ILGHE 345 (468)
Q Consensus 272 ~v~vs~GS~~~-~~~~~~~~~~~al~~~~--~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~pq~~---il~~~ 345 (468)
.+++..|+... ...+.+.+.+..+...+ ..+++. |.... .....-..........++.+.+++|+.+ ++..+
T Consensus 196 ~~i~~~G~~~~~K~~~~~l~~~~~~~~~~~~~~l~i~-G~~~~-~~~~~~~~~~~~~~~~~v~~~g~~~~~~~~~~~~~~ 273 (365)
T cd03809 196 PYFLYVGTIEPRKNLERLLEAFARLPAKGPDPKLVIV-GKRGW-LNEELLARLRELGLGDRVRFLGYVSDEELAALYRGA 273 (365)
T ss_pred CeEEEeCCCccccCHHHHHHHHHHHHHhcCCCCEEEe-cCCcc-ccHHHHHHHHHcCCCCeEEECCCCChhHHHHHHhhh
Confidence 55566787752 23344444444444433 455444 43210 0000000001122356788889998764 57777
Q ss_pred CcceEEec--CCcchHHHHHHhCCcEEecccccchhhHHHHHHhhcceeeeeccCCcccccCCCCccccHHHHHHHHHHH
Q 044031 346 SVGGFVTH--CGWSSVVEAVTYGVPMIAWPLYAEQFLNSVALVQEMKVAMPMFLNGEEETIGNGEGVVSAERVEERVREL 423 (468)
Q Consensus 346 ~~~~~ith--gG~~s~~eal~~GvP~v~~P~~~DQ~~na~~~~~~~g~g~~~~~~~~~~~~~~~~~~~~~~~l~~av~~~ 423 (468)
++-++-+. +..+++.||+++|+|+|+-...+ ....+ + ..|..+.. -+.+++.+++.++
T Consensus 274 d~~l~ps~~e~~~~~~~Ea~a~G~pvI~~~~~~----~~e~~-~--~~~~~~~~-------------~~~~~~~~~i~~l 333 (365)
T cd03809 274 RAFVFPSLYEGFGLPVLEAMACGTPVIASNISS----LPEVA-G--DAALYFDP-------------LDPEALAAAIERL 333 (365)
T ss_pred hhhcccchhccCCCCHHHHhcCCCcEEecCCCC----cccee-c--CceeeeCC-------------CCHHHHHHHHHHH
Confidence 77332222 23568999999999999865422 11222 2 23555542 4788999999999
Q ss_pred hcCch-hHHHHHHHHH
Q 044031 424 MMGSE-GKALRERSLE 438 (468)
Q Consensus 424 l~~~~-~~~~~~~a~~ 438 (468)
++|++ ..++.+++++
T Consensus 334 ~~~~~~~~~~~~~~~~ 349 (365)
T cd03809 334 LEDPALREELRERGLA 349 (365)
T ss_pred hcCHHHHHHHHHHHHH
Confidence 99885 4555555543
No 93
>PRK14089 ipid-A-disaccharide synthase; Provisional
Probab=98.14 E-value=9.3e-05 Score=71.27 Aligned_cols=152 Identities=14% Similarity=0.128 Sum_probs=86.1
Q ss_pred ceEEeccCCCcCCCHHHHHHHHHHHHhC---CCcEEEEEeCCCCccccCCChhHHhhccC-CCeEecCCCCHHhhhCccC
Q 044031 271 SVVFLCFGSRGTFSAPQLKEIAIGLERS---NQRFLWVVRNPSNAAEAELPEGFLERTKE-RGLVVKSWAPQSTILGHES 346 (468)
Q Consensus 271 ~~v~vs~GS~~~~~~~~~~~~~~al~~~---~~~~l~~~~~~~~~~~~~~~~~~~~~~~~-~~~~v~~~~pq~~il~~~~ 346 (468)
++|.+--||..+.-...+-.+.++.+.. ...|++ .+.. . . +.+.+.... ..+.+.+ .-.+++..++
T Consensus 168 ~~I~llPGSR~~Ei~~llP~~~~aa~~L~~~~~~~~i-~~a~-----~-~-~~i~~~~~~~~~~~~~~--~~~~~m~~aD 237 (347)
T PRK14089 168 GTIAFMPGSRKSEIKRLMPIFKELAKKLEGKEKILVV-PSFF-----K-G-KDLKEIYGDISEFEISY--DTHKALLEAE 237 (347)
T ss_pred CEEEEECCCCHHHHHHHHHHHHHHHHHHhhcCcEEEE-eCCC-----c-H-HHHHHHHhcCCCcEEec--cHHHHHHhhh
Confidence 5899999999644344444334444332 222333 2221 0 1 222222211 1222322 3346788888
Q ss_pred cceEEecCCcchHHHHHHhCCcEEecccc--cchhhHHHHHHh--hcceeeeecc--CCcc---cccCCCCccccHHHHH
Q 044031 347 VGGFVTHCGWSSVVEAVTYGVPMIAWPLY--AEQFLNSVALVQ--EMKVAMPMFL--NGEE---ETIGNGEGVVSAERVE 417 (468)
Q Consensus 347 ~~~~ithgG~~s~~eal~~GvP~v~~P~~--~DQ~~na~~~~~--~~g~g~~~~~--~~~~---~~~~~~~~~~~~~~l~ 417 (468)
+ +|+-+|..|+ |+..+|+|+|+ ++- .-|+.||++++. ..|+.-.+-- ..++ |-..++ +|++.|.
T Consensus 238 l--al~~SGT~TL-E~al~g~P~Vv-~Yk~~~lty~iak~lv~~~~igL~Nii~~~~~~~~vvPEllQ~~---~t~~~la 310 (347)
T PRK14089 238 F--AFICSGTATL-EAALIGTPFVL-AYKAKAIDYFIAKMFVKLKHIGLANIFFDFLGKEPLHPELLQEF---VTVENLL 310 (347)
T ss_pred H--HHhcCcHHHH-HHHHhCCCEEE-EEeCCHHHHHHHHHHHcCCeeehHHHhcCCCcccccCchhhccc---CCHHHHH
Confidence 7 9999999999 99999999999 663 479999999972 2355533310 0000 001244 8999999
Q ss_pred HHHHHHhcCchhHHHHHHHHHHHHHH
Q 044031 418 ERVRELMMGSEGKALRERSLEMRMMA 443 (468)
Q Consensus 418 ~av~~~l~~~~~~~~~~~a~~l~~~~ 443 (468)
+++.+. ..+++++...++++.+
T Consensus 311 ~~i~~~----~~~~~~~~~~~l~~~l 332 (347)
T PRK14089 311 KAYKEM----DREKFFKKSKELREYL 332 (347)
T ss_pred HHHHHH----HHHHHHHHHHHHHHHh
Confidence 998772 1225555555555543
No 94
>PLN00142 sucrose synthase
Probab=98.14 E-value=0.0025 Score=67.51 Aligned_cols=72 Identities=17% Similarity=0.221 Sum_probs=47.2
Q ss_pred eEEec---CCcc-hHHHHHHhCCcEEecccccchhhHHHHHHhhcceeeeeccCCcccccCCCCccccHHHHHHHHHH--
Q 044031 349 GFVTH---CGWS-SVVEAVTYGVPMIAWPLYAEQFLNSVALVQEMKVAMPMFLNGEEETIGNGEGVVSAERVEERVRE-- 422 (468)
Q Consensus 349 ~~ith---gG~~-s~~eal~~GvP~v~~P~~~DQ~~na~~~~~~~g~g~~~~~~~~~~~~~~~~~~~~~~~l~~av~~-- 422 (468)
+||.= =|.| ++.||+++|+|+|+-...+ ....+. .-..|..++. -+.+++.++|.+
T Consensus 669 VfVlPS~~EgFGLvvLEAMA~GlPVVATdvGG----~~EIV~-dG~tG~LV~P-------------~D~eaLA~aI~~lL 730 (815)
T PLN00142 669 AFVQPALYEAFGLTVVEAMTCGLPTFATCQGG----PAEIIV-DGVSGFHIDP-------------YHGDEAANKIADFF 730 (815)
T ss_pred EEEeCCcccCCCHHHHHHHHcCCCEEEcCCCC----HHHHhc-CCCcEEEeCC-------------CCHHHHHHHHHHHH
Confidence 36642 3444 8999999999999976544 334453 3246888874 356677777665
Q ss_pred --HhcCch-hHHHHHHHHH
Q 044031 423 --LMMGSE-GKALRERSLE 438 (468)
Q Consensus 423 --~l~~~~-~~~~~~~a~~ 438 (468)
++.|++ +++|.+++++
T Consensus 731 ekLl~Dp~lr~~mg~~Ar~ 749 (815)
T PLN00142 731 EKCKEDPSYWNKISDAGLQ 749 (815)
T ss_pred HHhcCCHHHHHHHHHHHHH
Confidence 456775 5667766644
No 95
>PF02684 LpxB: Lipid-A-disaccharide synthetase; InterPro: IPR003835 The biosynthesis of disaccharides, oligosaccharides and polysaccharides involves the action of hundreds of different glycosyltransferases. These enzymes catalyse the transfer of sugar moieties from activated donor molecules to specific acceptor molecules, forming glycosidic bonds. A classification of glycosyltransferases using nucleotide diphospho-sugar, nucleotide monophospho-sugar and sugar phosphates (2.4.1.- from EC) and related proteins into distinct sequence based families has been described []. This classification is available on the CAZy (CArbohydrate-Active EnZymes) web site. The same three-dimensional fold is expected to occur within each of the families. Because 3-D structures are better conserved than sequences, several of the families defined on the basis of sequence similarities may have similar 3-D structures and therefore form 'clans'. These enzymes belong to the glycosyltransferase family 19 GT19 from CAZY. Lipid-A-disaccharide synthetase 2.4.1.182 from EC is involved with acyl-[acyl-carrier-protein]--UDP-N-acetylglucosamine O-acyltransferase 2.3.1.129 from EC and tetraacyldisaccharide 4'-kinase 2.7.1.130 from EC in the biosynthesis of the phosphorylated glycolipid, lipid A, in the outer membrane of Escherichia coli and other bacteria. These enzymes catalyse the first disaccharide step in the synthesis of lipid-A-disaccharide.; GO: 0008915 lipid-A-disaccharide synthase activity, 0009245 lipid A biosynthetic process
Probab=98.14 E-value=0.0011 Score=64.50 Aligned_cols=202 Identities=19% Similarity=0.216 Sum_probs=105.2
Q ss_pred CCeeEecccccCCcCCCCCCCCCCcchhHHhhcCCCCCceEEeccCCCcCCCHHHHHHHHHH---HHh--CCCcEEEEEe
Q 044031 233 PPLHCIGPLIVDAKDRAGGVSDDVSSDCLTWLDSQPSGSVVFLCFGSRGTFSAPQLKEIAIG---LER--SNQRFLWVVR 307 (468)
Q Consensus 233 p~~~~VGpl~~~~~~~~~~~~~~~~~~l~~~l~~~~~~~~v~vs~GS~~~~~~~~~~~~~~a---l~~--~~~~~l~~~~ 307 (468)
-++.+||=.+.+..... . ......+.+ -.+++++|-+--||-.+.=...+..++++ +.+ .+.+|++..-
T Consensus 153 ~~~~~VGHPl~d~~~~~-~----~~~~~~~~~-l~~~~~iIaLLPGSR~~EI~rllP~~l~aa~~l~~~~p~l~fvvp~a 226 (373)
T PF02684_consen 153 VPVTYVGHPLLDEVKPE-P----DRAEAREKL-LDPDKPIIALLPGSRKSEIKRLLPIFLEAAKLLKKQRPDLQFVVPVA 226 (373)
T ss_pred CCeEEECCcchhhhccC-C----CHHHHHHhc-CCCCCcEEEEeCCCCHHHHHHHHHHHHHHHHHHHHhCCCeEEEEecC
Confidence 57999995544432111 1 222222332 22345599999999853222222333444 332 3566776543
Q ss_pred CCCCccccCCChhHHhhc--cCC--CeEecCCCCHHhhhCccCcceEEecCCcchHHHHHHhCCcEEecccc-cchhhHH
Q 044031 308 NPSNAAEAELPEGFLERT--KER--GLVVKSWAPQSTILGHESVGGFVTHCGWSSVVEAVTYGVPMIAWPLY-AEQFLNS 382 (468)
Q Consensus 308 ~~~~~~~~~~~~~~~~~~--~~~--~~~v~~~~pq~~il~~~~~~~~ithgG~~s~~eal~~GvP~v~~P~~-~DQ~~na 382 (468)
... ..+-+.... ... .+++ ..-.-.+++..+++ .+.-+| ..|+|+..+|+|||++=-. .=.+..|
T Consensus 227 ~~~------~~~~i~~~~~~~~~~~~~~~-~~~~~~~~m~~ad~--al~~SG-TaTLE~Al~g~P~Vv~Yk~~~lt~~ia 296 (373)
T PF02684_consen 227 PEV------HEELIEEILAEYPPDVSIVI-IEGESYDAMAAADA--ALAASG-TATLEAALLGVPMVVAYKVSPLTYFIA 296 (373)
T ss_pred CHH------HHHHHHHHHHhhCCCCeEEE-cCCchHHHHHhCcc--hhhcCC-HHHHHHHHhCCCEEEEEcCcHHHHHHH
Confidence 320 001011110 111 2222 22234456777777 666666 6789999999999987322 2345567
Q ss_pred HHHHhhcceeee-eccCCcc--cccCCCCccccHHHHHHHHHHHhcCchhHHHHHHHHHHHHHHHHhhcCCCCCChHHH
Q 044031 383 VALVQEMKVAMP-MFLNGEE--ETIGNGEGVVSAERVEERVRELMMGSEGKALRERSLEMRMMAATAWNNNDGGSSFTA 458 (468)
Q Consensus 383 ~~~~~~~g~g~~-~~~~~~~--~~~~~~~~~~~~~~l~~av~~~l~~~~~~~~~~~a~~l~~~~~~a~~~~~~g~~~~~ 458 (468)
+++.+.-=+|+. +-.+++- |-..++ .|++.|.+++.++++|+ ..++..+...+.+++... .+.++..+
T Consensus 297 k~lvk~~~isL~Niia~~~v~PEliQ~~---~~~~~i~~~~~~ll~~~---~~~~~~~~~~~~~~~~~~--~~~~~~~~ 367 (373)
T PF02684_consen 297 KRLVKVKYISLPNIIAGREVVPELIQED---ATPENIAAELLELLENP---EKRKKQKELFREIRQLLG--PGASSRAA 367 (373)
T ss_pred HHhhcCCEeechhhhcCCCcchhhhccc---CCHHHHHHHHHHHhcCH---HHHHHHHHHHHHHHHhhh--hccCCHHH
Confidence 776532122210 1100000 112234 89999999999999998 445555555666666555 55555443
No 96
>PLN02275 transferase, transferring glycosyl groups
Probab=98.08 E-value=0.01 Score=58.49 Aligned_cols=119 Identities=7% Similarity=-0.045 Sum_probs=64.0
Q ss_pred ceEEEecCCCccCHHHHHHHHHHHHhCCCCc-EEEEEeCCCCCCchhhhhhhhccccCCCCCeeEEEcCCCCCCCCCCCh
Q 044031 3 KTIALYPGPAFHHMISMVELGKLILQHRSDV-SITILVPSMPLEESKTCSYINSISHRLNPIISFYYLPAIQMPSETLSR 81 (468)
Q Consensus 3 ~~Iv~~~~~~~GHv~P~l~LA~~L~~~G~~h-~Vt~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~i~~~~lp~~~~~~ 81 (468)
.++.++..|-.|.-..+..++..|+++| | +|++++....... . +.. ...++..+.++......+....
T Consensus 5 ~~~~~~~~~~~g~~~r~~~~~~~l~~~~--~~~v~vi~~~~~~~~---~---~~~---~~~~v~v~r~~~~~~~~~~~~~ 73 (371)
T PLN02275 5 GRAAVVVLGDFGRSPRMQYHALSLARQA--SFQVDVVAYGGSEPI---P---ALL---NHPSIHIHLMVQPRLLQRLPRV 73 (371)
T ss_pred cEEEEEEecCCCCCHHHHHHHHHHHhcC--CceEEEEEecCCCCC---H---HHh---cCCcEEEEECCCcccccccccc
Confidence 4677777788999999999999999998 6 7999976433211 0 111 3346787777642111121111
Q ss_pred hHHHHHHHHHhhHHHHHHHHhh-hcCCCccEEEe--cCc-------HHHhhhCCCCeEEEec
Q 044031 82 ADIAIESIKLNSSNVFQALENI-SLTSKILSFII--TST-------TSFSYHPNIPTYTYFN 133 (468)
Q Consensus 82 ~~~~~~~~~~~~~~l~~ll~~~-~~~~~pD~vI~--~~~-------~~vA~~lgIP~i~~~~ 133 (468)
.. +...+......+..++..+ ....+||+|++ +.. ..++...++|.++.+.
T Consensus 74 ~~-~~~~~~~~~~~~~~~~~~~~~~~~~~DvV~~~~~~~~~~~~~~~~~~~~~~~p~v~~~h 134 (371)
T PLN02275 74 LY-ALALLLKVAIQFLMLLWFLCVKIPRPDVFLVQNPPSVPTLAVVKLACWLRRAKFVIDWH 134 (371)
T ss_pred hH-HHHHHHHHHHHHHHHHHHHHhhCCCCCEEEEeCCCCcHHHHHHHHHHHHhCCCEEEEcC
Confidence 11 1111211111222222221 12249999888 221 1244567899886533
No 97
>PLN02846 digalactosyldiacylglycerol synthase
Probab=98.05 E-value=0.0065 Score=60.86 Aligned_cols=74 Identities=9% Similarity=0.055 Sum_probs=49.8
Q ss_pred EecCCCCHHhhhCccCcceEEecC----CcchHHHHHHhCCcEEecccccchhhHHHHHHhhcceeeeeccCCcccccCC
Q 044031 331 VVKSWAPQSTILGHESVGGFVTHC----GWSSVVEAVTYGVPMIAWPLYAEQFLNSVALVQEMKVAMPMFLNGEEETIGN 406 (468)
Q Consensus 331 ~v~~~~pq~~il~~~~~~~~ithg----G~~s~~eal~~GvP~v~~P~~~DQ~~na~~~~~~~g~g~~~~~~~~~~~~~~ 406 (468)
++.++.+..+++...++ ||.-+ =-++++||+++|+|+|+.-..+ + ..+. .-+-|...+
T Consensus 287 vf~G~~~~~~~~~~~Dv--Fv~pS~~Et~g~v~lEAmA~G~PVVa~~~~~----~-~~v~-~~~ng~~~~---------- 348 (462)
T PLN02846 287 VYPGRDHADPLFHDYKV--FLNPSTTDVVCTTTAEALAMGKIVVCANHPS----N-EFFK-QFPNCRTYD---------- 348 (462)
T ss_pred EECCCCCHHHHHHhCCE--EEECCCcccchHHHHHHHHcCCcEEEecCCC----c-ceee-cCCceEecC----------
Confidence 35566666778887877 87653 3568999999999999986443 2 3232 213343332
Q ss_pred CCccccHHHHHHHHHHHhcCc
Q 044031 407 GEGVVSAERVEERVRELMMGS 427 (468)
Q Consensus 407 ~~~~~~~~~l~~av~~~l~~~ 427 (468)
+.+++.+++.++|.++
T Consensus 349 -----~~~~~a~ai~~~l~~~ 364 (462)
T PLN02846 349 -----DGKGFVRATLKALAEE 364 (462)
T ss_pred -----CHHHHHHHHHHHHccC
Confidence 5668899999998754
No 98
>cd03806 GT1_ALG11_like This family is most closely related to the GT1 family of glycosyltransferases. ALG11 in yeast is involved in adding the final 1,2-linked Man to the Man5GlcNAc2-PP-Dol synthesized on the cytosolic face of the ER. The deletion analysis of ALG11 was shown to block the early steps of core biosynthesis that takes place on the cytoplasmic face of the ER and lead to a defect in the assembly of lipid-linked oligosaccharides.
Probab=97.92 E-value=0.011 Score=59.26 Aligned_cols=91 Identities=21% Similarity=0.156 Sum_probs=57.4
Q ss_pred CCCeEecCCCCHHh---hhCccCcceEEe-----cCCcchHHHHHHhCCcEEecccccchhhHHHHHH---hhcceeeee
Q 044031 327 ERGLVVKSWAPQST---ILGHESVGGFVT-----HCGWSSVVEAVTYGVPMIAWPLYAEQFLNSVALV---QEMKVAMPM 395 (468)
Q Consensus 327 ~~~~~v~~~~pq~~---il~~~~~~~~it-----hgG~~s~~eal~~GvP~v~~P~~~DQ~~na~~~~---~~~g~g~~~ 395 (468)
.+++.+.+++|+.+ +|..+++ +|+ |-| .++.||+++|+|+|+.-..+.- ...+. +. ..|...
T Consensus 304 ~~~V~f~g~v~~~~l~~~l~~adv--~v~~s~~E~Fg-i~~lEAMa~G~pvIa~~~ggp~---~~iv~~~~~g-~~G~l~ 376 (419)
T cd03806 304 EDKVEFVVNAPFEELLEELSTASI--GLHTMWNEHFG-IGVVEYMAAGLIPLAHASGGPL---LDIVVPWDGG-PTGFLA 376 (419)
T ss_pred CCeEEEecCCCHHHHHHHHHhCeE--EEECCccCCcc-cHHHHHHHcCCcEEEEcCCCCc---hheeeccCCC-CceEEe
Confidence 45788888998764 6777777 443 223 4889999999999986543311 11121 12 455543
Q ss_pred ccCCcccccCCCCccccHHHHHHHHHHHhcCch--hHHHHHHHHHH
Q 044031 396 FLNGEEETIGNGEGVVSAERVEERVRELMMGSE--GKALRERSLEM 439 (468)
Q Consensus 396 ~~~~~~~~~~~~~~~~~~~~l~~av~~~l~~~~--~~~~~~~a~~l 439 (468)
-+.+++.+++.+++++++ .+.+++++++.
T Consensus 377 ---------------~d~~~la~ai~~ll~~~~~~~~~~~~~~~~~ 407 (419)
T cd03806 377 ---------------STAEEYAEAIEKILSLSEEERLRIRRAARSS 407 (419)
T ss_pred ---------------CCHHHHHHHHHHHHhCCHHHHHHHHHHHHHH
Confidence 267899999999998763 23344444443
No 99
>cd04946 GT1_AmsK_like This family is most closely related to the GT1 family of glycosyltransferases. AmsK is involved in the biosynthesis of amylovoran, which functions as a virulence factor. It functions as a glycosyl transferase which transfers galactose from UDP-galactose to a lipid-linked amylovoran-subunit precursor. The members of this family are found mainly in bacteria and Archaea.
Probab=97.87 E-value=0.0003 Score=70.23 Aligned_cols=164 Identities=12% Similarity=0.140 Sum_probs=93.7
Q ss_pred eEEeccCCCcCC-CHHHHHHHHHHHHhC--CCcEEEEE-eCCCCccccCCChhHHhhccCCCeEecCCCCHHh---hhCc
Q 044031 272 VVFLCFGSRGTF-SAPQLKEIAIGLERS--NQRFLWVV-RNPSNAAEAELPEGFLERTKERGLVVKSWAPQST---ILGH 344 (468)
Q Consensus 272 ~v~vs~GS~~~~-~~~~~~~~~~al~~~--~~~~l~~~-~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~pq~~---il~~ 344 (468)
..+++.|.+... ..+.+.+.+..+... +..+.|.. |.+.. ...+-+-..+.....++.+.+|+++.+ ++..
T Consensus 231 ~~il~~Grl~~~Kg~~~li~a~~~l~~~~p~~~l~~~iiG~g~~--~~~l~~~~~~~~~~~~V~f~G~v~~~e~~~~~~~ 308 (407)
T cd04946 231 LRIVSCSYLVPVKRVDLIIKALAALAKARPSIKIKWTHIGGGPL--EDTLKELAESKPENISVNFTGELSNSEVYKLYKE 308 (407)
T ss_pred EEEEEeeccccccCHHHHHHHHHHHHHhCCCceEEEEEEeCchH--HHHHHHHHHhcCCCceEEEecCCChHHHHHHHhh
Confidence 666777877532 234343433334332 24565543 33210 000111111111234677889999765 4444
Q ss_pred cCcceEEecCC----cchHHHHHHhCCcEEecccccchhhHHHHHHhhcceeeeeccCCcccccCCCCccccHHHHHHHH
Q 044031 345 ESVGGFVTHCG----WSSVVEAVTYGVPMIAWPLYAEQFLNSVALVQEMKVAMPMFLNGEEETIGNGEGVVSAERVEERV 420 (468)
Q Consensus 345 ~~~~~~ithgG----~~s~~eal~~GvP~v~~P~~~DQ~~na~~~~~~~g~g~~~~~~~~~~~~~~~~~~~~~~~l~~av 420 (468)
+++.+||...- .++++||+++|+|+|+-...+ ....+. .-+.|..+.. . -+.+++.++|
T Consensus 309 ~~~~v~v~~S~~Eg~p~~llEAma~G~PVIas~vgg----~~e~i~-~~~~G~l~~~---------~---~~~~~la~~I 371 (407)
T cd04946 309 NPVDVFVNLSESEGLPVSIMEAMSFGIPVIATNVGG----TPEIVD-NGGNGLLLSK---------D---PTPNELVSSL 371 (407)
T ss_pred cCCCEEEeCCccccccHHHHHHHHcCCCEEeCCCCC----cHHHhc-CCCcEEEeCC---------C---CCHHHHHHHH
Confidence 44555775543 458999999999999865433 455553 4247887763 2 4789999999
Q ss_pred HHHhcCch-hHHHHHHHHHHHHHHHHhhcCCCCCChHHHHHHHH
Q 044031 421 RELMMGSE-GKALRERSLEMRMMAATAWNNNDGGSSFTAFSNLF 463 (468)
Q Consensus 421 ~~~l~~~~-~~~~~~~a~~l~~~~~~a~~~~~~g~~~~~~~~~~ 463 (468)
.++++|++ .++|+++|++.-+ +.=+...+.++|+
T Consensus 372 ~~ll~~~~~~~~m~~~ar~~~~---------~~f~~~~~~~~~~ 406 (407)
T cd04946 372 SKFIDNEEEYQTMREKAREKWE---------ENFNASKNYREFA 406 (407)
T ss_pred HHHHhCHHHHHHHHHHHHHHHH---------HHcCHHHhHHHhc
Confidence 99999885 4556666555433 3444555555553
No 100
>COG0381 WecB UDP-N-acetylglucosamine 2-epimerase [Cell envelope biogenesis, outer membrane]
Probab=97.85 E-value=0.0068 Score=58.01 Aligned_cols=329 Identities=17% Similarity=0.143 Sum_probs=169.7
Q ss_pred CcceEEEecCCCccCHHHHHHHHHHHHhCCCCcEEEEEeCCCCCCchhhhhhhhccccCCCCCeeEEEcCCCCCCCCCCC
Q 044031 1 MKKTIALYPGPAFHHMISMVELGKLILQHRSDVSITILVPSMPLEESKTCSYINSISHRLNPIISFYYLPAIQMPSETLS 80 (468)
Q Consensus 1 m~~~Iv~~~~~~~GHv~P~l~LA~~L~~~G~~h~Vt~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~i~~~~lp~~~~~ 80 (468)
|++.-+++-+|++=.++=+-.|.+++.+.+ +.+..++.+.-.........+.+.+ ++.. |+-.+.-. .
T Consensus 1 m~~~Kv~~I~GTRPE~iKmapli~~~~~~~-~~~~~vi~TGQH~d~em~~~~le~~------~i~~---pdy~L~i~--~ 68 (383)
T COG0381 1 MKMLKVLTIFGTRPEAIKMAPLVKALEKDP-DFELIVIHTGQHRDYEMLDQVLELF------GIRK---PDYDLNIM--K 68 (383)
T ss_pred CCceEEEEEEecCHHHHHHhHHHHHHHhCC-CCceEEEEecccccHHHHHHHHHHh------CCCC---CCcchhcc--c
Confidence 555455666699999999999999999985 3555555444333112222232222 2221 11111111 0
Q ss_pred hhHHHHHHHHHhhHHHHHHHHhhhcCCCccEEEe------cCc-HHHhhhCCCCeEEEecchhHHHHHHHhhhhhhhccc
Q 044031 81 RADIAIESIKLNSSNVFQALENISLTSKILSFII------TST-TSFSYHPNIPTYTYFNSCASTLAAILYLPTLHNQIT 153 (468)
Q Consensus 81 ~~~~~~~~~~~~~~~l~~ll~~~~~~~~pD~vI~------~~~-~~vA~~lgIP~i~~~~~~~~~~~~~~~~p~~~~~~~ 153 (468)
...-+..........+.+++.+. +||+|++ ..+ ..+|-.++||+...-.
T Consensus 69 ~~~tl~~~t~~~i~~~~~vl~~~----kPD~VlVhGDT~t~lA~alaa~~~~IpV~HvEA-------------------- 124 (383)
T COG0381 69 PGQTLGEITGNIIEGLSKVLEEE----KPDLVLVHGDTNTTLAGALAAFYLKIPVGHVEA-------------------- 124 (383)
T ss_pred cCCCHHHHHHHHHHHHHHHHHhh----CCCEEEEeCCcchHHHHHHHHHHhCCceEEEec--------------------
Confidence 01113445556677888888887 9999988 223 4466678999875422
Q ss_pred CCCCCCCCccccCCCCCCCCCCC--CCccccCCCchhHHHHHHHhhhhcccceEEecChhhhhHHHHHHHHcCcccCCCC
Q 044031 154 SSFKDHPSSLLFIPGLPPVKSSF--MPEPVLDRQKPIYDFFLNYSTSLSKSNGIIINTFDFLEQQAIKAIVNGDCVTNGT 231 (468)
Q Consensus 154 ~~~~~~~~~~~~~pg~~~~~~~~--l~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~s~~~le~~~~~~~~~~~~~~~~~ 231 (468)
|+ +..+ +|..+.. +....+ ++.-+.+| +...-..++... +
T Consensus 125 --------------Gl---Rt~~~~~PEE~NR----------~l~~~~--S~~hfapt----e~ar~nLl~EG~-----~ 166 (383)
T COG0381 125 --------------GL---RTGDLYFPEEINR----------RLTSHL--SDLHFAPT----EIARKNLLREGV-----P 166 (383)
T ss_pred --------------cc---ccCCCCCcHHHHH----------HHHHHh--hhhhcCCh----HHHHHHHHHcCC-----C
Confidence 00 0000 1111000 000000 00001111 111111222221 2
Q ss_pred CCCeeEecccccCCcCCCCCCCCCCcchhHHh-hcCCCCCceEEeccCCCcCCCHHHHHHHHHHH----HhC-CCcEEEE
Q 044031 232 TPPLHCIGPLIVDAKDRAGGVSDDVSSDCLTW-LDSQPSGSVVFLCFGSRGTFSAPQLKEIAIGL----ERS-NQRFLWV 305 (468)
Q Consensus 232 ~p~~~~VGpl~~~~~~~~~~~~~~~~~~l~~~-l~~~~~~~~v~vs~GS~~~~~~~~~~~~~~al----~~~-~~~~l~~ 305 (468)
..+++.+|-...+.-...... -..+.+...- +... .+..+.+++=-..+.. +.+.++++++ +.. +..+|..
T Consensus 167 ~~~IfvtGnt~iDal~~~~~~-~~~~~~~~~~~~~~~-~~~~iLvT~HRreN~~-~~~~~i~~al~~i~~~~~~~~viyp 243 (383)
T COG0381 167 EKRIFVTGNTVIDALLNTRDR-VLEDSKILAKGLDDK-DKKYILVTAHRRENVG-EPLEEICEALREIAEEYPDVIVIYP 243 (383)
T ss_pred ccceEEeCChHHHHHHHHHhh-hccchhhHHhhhccc-cCcEEEEEcchhhccc-ccHHHHHHHHHHHHHhCCCceEEEe
Confidence 235888887654321000000 0012222221 2222 2238888764443333 3344444433 443 4556554
Q ss_pred EeCCCCccccCCChhHHhhcc-CCCeEec---CCCCHHhhhCccCcceEEecCCcchHHHHHHhCCcEEecccccchhhH
Q 044031 306 VRNPSNAAEAELPEGFLERTK-ERGLVVK---SWAPQSTILGHESVGGFVTHCGWSSVVEAVTYGVPMIAWPLYAEQFLN 381 (468)
Q Consensus 306 ~~~~~~~~~~~~~~~~~~~~~-~~~~~v~---~~~pq~~il~~~~~~~~ithgG~~s~~eal~~GvP~v~~P~~~DQ~~n 381 (468)
+... ..+-+-...+.+ ..++.+. +|.+...++.++.+ ++|-.| |-.-||-..|+|++++=...+||.
T Consensus 244 ~H~~-----~~v~e~~~~~L~~~~~v~li~pl~~~~f~~L~~~a~~--iltDSG-giqEEAp~lg~Pvl~lR~~TERPE- 314 (383)
T COG0381 244 VHPR-----PRVRELVLKRLKNVERVKLIDPLGYLDFHNLMKNAFL--ILTDSG-GIQEEAPSLGKPVLVLRDTTERPE- 314 (383)
T ss_pred CCCC-----hhhhHHHHHHhCCCCcEEEeCCcchHHHHHHHHhceE--EEecCC-chhhhHHhcCCcEEeeccCCCCcc-
Confidence 4432 001000012222 2355554 46677788888877 999888 567799999999999998888887
Q ss_pred HHHHHhhcceeeeeccCCcccccCCCCccccHHHHHHHHHHHhcCchhHHHHHHH
Q 044031 382 SVALVQEMKVAMPMFLNGEEETIGNGEGVVSAERVEERVRELMMGSEGKALRERS 436 (468)
Q Consensus 382 a~~~~~~~g~g~~~~~~~~~~~~~~~~~~~~~~~l~~av~~~l~~~~~~~~~~~a 436 (468)
++ ++ |.-+.+. .+.+.+.+++.++++++ +..+|.
T Consensus 315 --~v-~a-gt~~lvg--------------~~~~~i~~~~~~ll~~~---~~~~~m 348 (383)
T COG0381 315 --GV-EA-GTNILVG--------------TDEENILDAATELLEDE---EFYERM 348 (383)
T ss_pred --ce-ec-CceEEeC--------------ccHHHHHHHHHHHhhCh---HHHHHH
Confidence 34 44 6655555 57799999999999988 555543
No 101
>PRK15179 Vi polysaccharide biosynthesis protein TviE; Provisional
Probab=97.79 E-value=0.075 Score=56.29 Aligned_cols=95 Identities=15% Similarity=0.153 Sum_probs=60.4
Q ss_pred CCCeEecCCCCHH-hhhCccCcceEEe---cCC-cchHHHHHHhCCcEEecccccchhhHHHHHHhhcceeeeeccCCcc
Q 044031 327 ERGLVVKSWAPQS-TILGHESVGGFVT---HCG-WSSVVEAVTYGVPMIAWPLYAEQFLNSVALVQEMKVAMPMFLNGEE 401 (468)
Q Consensus 327 ~~~~~v~~~~pq~-~il~~~~~~~~it---hgG-~~s~~eal~~GvP~v~~P~~~DQ~~na~~~~~~~g~g~~~~~~~~~ 401 (468)
.+++.+.+|.++. .++..+++ ||. +-| .+++.||+++|+|+|+....+ ....+. .-..|+.++.
T Consensus 573 ~~~V~flG~~~dv~~ll~aaDv--~VlpS~~Egfp~vlLEAMA~G~PVVat~~gG----~~EiV~-dg~~GlLv~~---- 641 (694)
T PRK15179 573 GERILFTGLSRRVGYWLTQFNA--FLLLSRFEGLPNVLIEAQFSGVPVVTTLAGG----AGEAVQ-EGVTGLTLPA---- 641 (694)
T ss_pred CCcEEEcCCcchHHHHHHhcCE--EEeccccccchHHHHHHHHcCCeEEEECCCC----hHHHcc-CCCCEEEeCC----
Confidence 4567787887743 56777777 553 344 568999999999999986532 334453 3146888764
Q ss_pred cccCCCCccccHHHHHHHHHHHhcCch-hHHHHHHHHHH
Q 044031 402 ETIGNGEGVVSAERVEERVRELMMGSE-GKALRERSLEM 439 (468)
Q Consensus 402 ~~~~~~~~~~~~~~l~~av~~~l~~~~-~~~~~~~a~~l 439 (468)
.+ .+.+++.+++.+++.+.. ...+++++++.
T Consensus 642 ----~d---~~~~~La~aL~~ll~~l~~~~~l~~~ar~~ 673 (694)
T PRK15179 642 ----DT---VTAPDVAEALARIHDMCAADPGIARKAADW 673 (694)
T ss_pred ----CC---CChHHHHHHHHHHHhChhccHHHHHHHHHH
Confidence 33 456677777766665321 12666665544
No 102
>PRK00654 glgA glycogen synthase; Provisional
Probab=97.77 E-value=0.0098 Score=60.51 Aligned_cols=134 Identities=13% Similarity=0.071 Sum_probs=70.9
Q ss_pred ceEEeccCCCcC-CCHHHHHHHHHHHHhCCCcEEEEEeCCCCccccCCChhHHhhc--cCCCeE-ecCCCCHH--hhhCc
Q 044031 271 SVVFLCFGSRGT-FSAPQLKEIAIGLERSNQRFLWVVRNPSNAAEAELPEGFLERT--KERGLV-VKSWAPQS--TILGH 344 (468)
Q Consensus 271 ~~v~vs~GS~~~-~~~~~~~~~~~al~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~--~~~~~~-v~~~~pq~--~il~~ 344 (468)
.++++..|.+.. ...+.+.+.+..+...+.+++++ |.+. ....+.+.+.. .+.++. ...|-.+. .+++.
T Consensus 282 ~~~i~~vGRl~~~KG~~~li~a~~~l~~~~~~lviv-G~g~----~~~~~~l~~l~~~~~~~v~~~~g~~~~~~~~~~~~ 356 (466)
T PRK00654 282 APLFAMVSRLTEQKGLDLVLEALPELLEQGGQLVLL-GTGD----PELEEAFRALAARYPGKVGVQIGYDEALAHRIYAG 356 (466)
T ss_pred CcEEEEeeccccccChHHHHHHHHHHHhcCCEEEEE-ecCc----HHHHHHHHHHHHHCCCcEEEEEeCCHHHHHHHHhh
Confidence 356666787752 22233333333333346777665 4320 00111222111 123343 33553222 46777
Q ss_pred cCcceEEe---cCCc-chHHHHHHhCCcEEeccccc--chhhHHHHHHhhcceeeeeccCCcccccCCCCccccHHHHHH
Q 044031 345 ESVGGFVT---HCGW-SSVVEAVTYGVPMIAWPLYA--EQFLNSVALVQEMKVAMPMFLNGEEETIGNGEGVVSAERVEE 418 (468)
Q Consensus 345 ~~~~~~it---hgG~-~s~~eal~~GvP~v~~P~~~--DQ~~na~~~~~~~g~g~~~~~~~~~~~~~~~~~~~~~~~l~~ 418 (468)
+++ ||. +-|. .+.+||+++|+|.|+.-..+ |.-.+...-.+. +.|+.++. -+.+++.+
T Consensus 357 aDv--~v~PS~~E~~gl~~lEAma~G~p~V~~~~gG~~e~v~~~~~~~~~-~~G~lv~~-------------~d~~~la~ 420 (466)
T PRK00654 357 ADM--FLMPSRFEPCGLTQLYALRYGTLPIVRRTGGLADTVIDYNPEDGE-ATGFVFDD-------------FNAEDLLR 420 (466)
T ss_pred CCE--EEeCCCCCCchHHHHHHHHCCCCEEEeCCCCccceeecCCCCCCC-CceEEeCC-------------CCHHHHHH
Confidence 777 663 2243 38899999999999875432 211111000122 67888874 47889999
Q ss_pred HHHHHhc
Q 044031 419 RVRELMM 425 (468)
Q Consensus 419 av~~~l~ 425 (468)
++.++++
T Consensus 421 ~i~~~l~ 427 (466)
T PRK00654 421 ALRRALE 427 (466)
T ss_pred HHHHHHH
Confidence 9999875
No 103
>PF00534 Glycos_transf_1: Glycosyl transferases group 1; InterPro: IPR001296 The biosynthesis of disaccharides, oligosaccharides and polysaccharides involves the action of hundreds of different glycosyltransferases. These enzymes catalyse the transfer of sugar moieties from activated donor molecules to specific acceptor molecules, forming glycosidic bonds. A classification of glycosyltransferases using nucleotide diphospho-sugar, nucleotide monophospho-sugar and sugar phosphates (2.4.1.- from EC) and related proteins into distinct sequence based families has been described []. This classification is available on the CAZy (CArbohydrate-Active EnZymes) web site. The same three-dimensional fold is expected to occur within each of the families. Because 3-D structures are better conserved than sequences, several of the families defined on the basis of sequence similarities may have similar 3-D structures and therefore form 'clans'. Proteins containign this domain transfer UDP, ADP, GDP or CMP linked sugars to a variety of substrates, including glycogen, fructose-6-phosphate and lipopolysaccharides. The bacterial enzymes are involved in various biosynthetic processes that include exopolysaccharide biosynthesis, lipopolysaccharide core biosynthesis and the biosynthesis of the slime polysaccaride colanic acid. Mutations in this domain of the human N-acetylglucosaminyl-phosphatidylinositol biosynthetic protein are the cause of paroxysmal nocturnal hemoglobinuria (PNH), an acquired hemolytic blood disorder characterised by venous thrombosis, erythrocyte hemolysis, infections and defective hematopoiesis.; GO: 0009058 biosynthetic process; PDB: 2L7C_A 2IV3_B 2IUY_B 2XA9_A 2XA1_B 2X6R_A 2XMP_B 2XA2_B 2X6Q_A 3QHP_B ....
Probab=97.75 E-value=0.00024 Score=61.52 Aligned_cols=148 Identities=17% Similarity=0.162 Sum_probs=87.9
Q ss_pred CCceEEeccCCCcC-CCHHHHHHHHHHHHh--CCCcEEEEEeCCCCccccCCChhHHhhccCCCeEecCCCCH---Hhhh
Q 044031 269 SGSVVFLCFGSRGT-FSAPQLKEIAIGLER--SNQRFLWVVRNPSNAAEAELPEGFLERTKERGLVVKSWAPQ---STIL 342 (468)
Q Consensus 269 ~~~~v~vs~GS~~~-~~~~~~~~~~~al~~--~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~pq---~~il 342 (468)
.+..+++..|+... ...+.+.+++.-+.. ...-.++.+|... ....+-..........++.+..+.++ ..++
T Consensus 13 ~~~~~il~~g~~~~~K~~~~li~a~~~l~~~~~~~~~l~i~G~~~--~~~~~~~~~~~~~~~~~i~~~~~~~~~~l~~~~ 90 (172)
T PF00534_consen 13 DKKKIILFIGRLDPEKGIDLLIEAFKKLKEKKNPNYKLVIVGDGE--YKKELKNLIEKLNLKENIIFLGYVPDDELDELY 90 (172)
T ss_dssp TTSEEEEEESESSGGGTHHHHHHHHHHHHHHHHTTEEEEEESHCC--HHHHHHHHHHHTTCGTTEEEEESHSHHHHHHHH
T ss_pred CCCeEEEEEecCccccCHHHHHHHHHHHHhhcCCCeEEEEEcccc--ccccccccccccccccccccccccccccccccc
Confidence 44477777888753 233334444443331 2333455555220 00001011111123457777788873 3467
Q ss_pred CccCcceEEec----CCcchHHHHHHhCCcEEecccccchhhHHHHHHhhcceeeeeccCCcccccCCCCccccHHHHHH
Q 044031 343 GHESVGGFVTH----CGWSSVVEAVTYGVPMIAWPLYAEQFLNSVALVQEMKVAMPMFLNGEEETIGNGEGVVSAERVEE 418 (468)
Q Consensus 343 ~~~~~~~~ith----gG~~s~~eal~~GvP~v~~P~~~DQ~~na~~~~~~~g~g~~~~~~~~~~~~~~~~~~~~~~~l~~ 418 (468)
..+++ +|+. +...++.||+++|+|+|+.- ...+...+. ....|+.++. .+.+++.+
T Consensus 91 ~~~di--~v~~s~~e~~~~~~~Ea~~~g~pvI~~~----~~~~~e~~~-~~~~g~~~~~-------------~~~~~l~~ 150 (172)
T PF00534_consen 91 KSSDI--FVSPSRNEGFGLSLLEAMACGCPVIASD----IGGNNEIIN-DGVNGFLFDP-------------NDIEELAD 150 (172)
T ss_dssp HHTSE--EEE-BSSBSS-HHHHHHHHTT-EEEEES----STHHHHHSG-TTTSEEEEST-------------TSHHHHHH
T ss_pred cccee--ccccccccccccccccccccccceeecc----ccCCceeec-cccceEEeCC-------------CCHHHHHH
Confidence 77777 6665 56679999999999999854 455555554 4366888874 58999999
Q ss_pred HHHHHhcCch-hHHHHHHHHH
Q 044031 419 RVRELMMGSE-GKALRERSLE 438 (468)
Q Consensus 419 av~~~l~~~~-~~~~~~~a~~ 438 (468)
+|.+++++++ .+.|.+++++
T Consensus 151 ~i~~~l~~~~~~~~l~~~~~~ 171 (172)
T PF00534_consen 151 AIEKLLNDPELRQKLGKNARE 171 (172)
T ss_dssp HHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHCCHHHHHHHHHHhcC
Confidence 9999999885 5667776664
No 104
>PRK15427 colanic acid biosynthesis glycosyltransferase WcaL; Provisional
Probab=97.74 E-value=0.00087 Score=66.81 Aligned_cols=94 Identities=16% Similarity=0.200 Sum_probs=66.5
Q ss_pred CCCeEecCCCCHHh---hhCccCcceEEe--c-------CCc-chHHHHHHhCCcEEecccccchhhHHHHHHhhcceee
Q 044031 327 ERGLVVKSWAPQST---ILGHESVGGFVT--H-------CGW-SSVVEAVTYGVPMIAWPLYAEQFLNSVALVQEMKVAM 393 (468)
Q Consensus 327 ~~~~~v~~~~pq~~---il~~~~~~~~it--h-------gG~-~s~~eal~~GvP~v~~P~~~DQ~~na~~~~~~~g~g~ 393 (468)
.+++.+.+|+|+.+ ++..+++ ||. + =|. ++++||+++|+|+|+-...+ ....+. .-..|+
T Consensus 278 ~~~V~~~G~~~~~el~~~l~~aDv--~v~pS~~~~~g~~Eg~p~~llEAma~G~PVI~t~~~g----~~E~v~-~~~~G~ 350 (406)
T PRK15427 278 EDVVEMPGFKPSHEVKAMLDDADV--FLLPSVTGADGDMEGIPVALMEAMAVGIPVVSTLHSG----IPELVE-ADKSGW 350 (406)
T ss_pred CCeEEEeCCCCHHHHHHHHHhCCE--EEECCccCCCCCccCccHHHHHHHhCCCCEEEeCCCC----chhhhc-CCCceE
Confidence 45788889999765 5667777 554 2 243 56899999999999976543 334453 325677
Q ss_pred eeccCCcccccCCCCccccHHHHHHHHHHHhc-Cch-hHHHHHHHHHHH
Q 044031 394 PMFLNGEEETIGNGEGVVSAERVEERVRELMM-GSE-GKALRERSLEMR 440 (468)
Q Consensus 394 ~~~~~~~~~~~~~~~~~~~~~~l~~av~~~l~-~~~-~~~~~~~a~~l~ 440 (468)
.++. -+.+++.++|.++++ |++ .++|.+++++..
T Consensus 351 lv~~-------------~d~~~la~ai~~l~~~d~~~~~~~~~~ar~~v 386 (406)
T PRK15427 351 LVPE-------------NDAQALAQRLAAFSQLDTDELAPVVKRAREKV 386 (406)
T ss_pred EeCC-------------CCHHHHHHHHHHHHhCCHHHHHHHHHHHHHHH
Confidence 7763 478899999999998 875 566666665543
No 105
>cd03804 GT1_wbaZ_like This family is most closely related to the GT1 family of glycosyltransferases. wbaZ in Salmonella enterica has been shown to possess the mannosyl transferase activity. The members of this family are found in certain bacteria and Archaea.
Probab=97.73 E-value=0.00023 Score=69.44 Aligned_cols=139 Identities=12% Similarity=0.138 Sum_probs=89.3
Q ss_pred EEeccCCCcCCCHHHHHHHHHHHHhCCCcEEEEEeCCCCccccCCChhHHhhccCCCeEecCCCCHHh---hhCccCcce
Q 044031 273 VFLCFGSRGTFSAPQLKEIAIGLERSNQRFLWVVRNPSNAAEAELPEGFLERTKERGLVVKSWAPQST---ILGHESVGG 349 (468)
Q Consensus 273 v~vs~GS~~~~~~~~~~~~~~al~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~pq~~---il~~~~~~~ 349 (468)
.++..|++. ..+.+..++++++..+.+++++-.+. . .+.+.+ ...+++.+.+++|+.+ ++..+++-+
T Consensus 197 ~il~~G~~~--~~K~~~~li~a~~~~~~~l~ivG~g~---~----~~~l~~-~~~~~V~~~g~~~~~~~~~~~~~ad~~v 266 (351)
T cd03804 197 YYLSVGRLV--PYKRIDLAIEAFNKLGKRLVVIGDGP---E----LDRLRA-KAGPNVTFLGRVSDEELRDLYARARAFL 266 (351)
T ss_pred EEEEEEcCc--cccChHHHHHHHHHCCCcEEEEECCh---h----HHHHHh-hcCCCEEEecCCCHHHHHHHHHhCCEEE
Confidence 345567765 23445667788877777766543332 0 112222 2457888889999854 677888733
Q ss_pred EEecCCc-chHHHHHHhCCcEEecccccchhhHHHHHHhhcceeeeeccCCcccccCCCCccccHHHHHHHHHHHhcCc-
Q 044031 350 FVTHCGW-SSVVEAVTYGVPMIAWPLYAEQFLNSVALVQEMKVAMPMFLNGEEETIGNGEGVVSAERVEERVRELMMGS- 427 (468)
Q Consensus 350 ~ithgG~-~s~~eal~~GvP~v~~P~~~DQ~~na~~~~~~~g~g~~~~~~~~~~~~~~~~~~~~~~~l~~av~~~l~~~- 427 (468)
+-+.-|. .++.||+++|+|+|+....+ ....+.+. +.|..++. -+.+.+.++|.++++|+
T Consensus 267 ~ps~e~~g~~~~Eama~G~Pvi~~~~~~----~~e~i~~~-~~G~~~~~-------------~~~~~la~~i~~l~~~~~ 328 (351)
T cd03804 267 FPAEEDFGIVPVEAMASGTPVIAYGKGG----ALETVIDG-VTGILFEE-------------QTVESLAAAVERFEKNED 328 (351)
T ss_pred ECCcCCCCchHHHHHHcCCCEEEeCCCC----CcceeeCC-CCEEEeCC-------------CCHHHHHHHHHHHHhCcc
Confidence 3344444 46789999999999986543 23334333 67888763 47788999999999987
Q ss_pred h-hHHHHHHHHHH
Q 044031 428 E-GKALRERSLEM 439 (468)
Q Consensus 428 ~-~~~~~~~a~~l 439 (468)
+ .+.++++++++
T Consensus 329 ~~~~~~~~~~~~~ 341 (351)
T cd03804 329 FDPQAIRAHAERF 341 (351)
T ss_pred cCHHHHHHHHHhc
Confidence 2 45566665543
No 106
>COG0763 LpxB Lipid A disaccharide synthetase [Cell envelope biogenesis, outer membrane]
Probab=97.73 E-value=0.014 Score=55.76 Aligned_cols=212 Identities=18% Similarity=0.206 Sum_probs=111.1
Q ss_pred CeeEecccccCCc-CCCCCCCCCCcchhHHhhcCCCCCceEEeccCCCcCCCHHHHHHHHH---HHH--hCCCcEEEEEe
Q 044031 234 PLHCIGPLIVDAK-DRAGGVSDDVSSDCLTWLDSQPSGSVVFLCFGSRGTFSAPQLKEIAI---GLE--RSNQRFLWVVR 307 (468)
Q Consensus 234 ~~~~VGpl~~~~~-~~~~~~~~~~~~~l~~~l~~~~~~~~v~vs~GS~~~~~~~~~~~~~~---al~--~~~~~~l~~~~ 307 (468)
+..|||=...+.. ..+ ....+.+-+....++.++.+--||-.+.-...+..+.+ .|+ ..+.+|+.-+-
T Consensus 157 ~~~yVGHpl~d~i~~~~------~r~~ar~~l~~~~~~~~lalLPGSR~sEI~rl~~~f~~a~~~l~~~~~~~~~vlp~~ 230 (381)
T COG0763 157 PCTYVGHPLADEIPLLP------DREAAREKLGIDADEKTLALLPGSRRSEIRRLLPPFVQAAQELKARYPDLKFVLPLV 230 (381)
T ss_pred CeEEeCChhhhhccccc------cHHHHHHHhCCCCCCCeEEEecCCcHHHHHHHHHHHHHHHHHHHhhCCCceEEEecC
Confidence 3889994443322 111 23334444444445559999999986332222333333 333 23567776554
Q ss_pred CCCCccccCCChhHHhhcc-CCCeEecCCCCHHhhhCccCcceEEecCCcchHHHHHHhCCcEEeccccc-chhhHHHHH
Q 044031 308 NPSNAAEAELPEGFLERTK-ERGLVVKSWAPQSTILGHESVGGFVTHCGWSSVVEAVTYGVPMIAWPLYA-EQFLNSVAL 385 (468)
Q Consensus 308 ~~~~~~~~~~~~~~~~~~~-~~~~~v~~~~pq~~il~~~~~~~~ithgG~~s~~eal~~GvP~v~~P~~~-DQ~~na~~~ 385 (468)
.. ..+.+-........ ....++.+.--. .++..+++ .+.-+| .-++|+.-+|+|||+.=-.. =-+..+++.
T Consensus 231 ~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~-~a~~~aD~--al~aSG-T~tLE~aL~g~P~Vv~Yk~~~it~~iak~l 303 (381)
T COG0763 231 NA---KYRRIIEEALKWEVAGLSLILIDGEKR-KAFAAADA--ALAASG-TATLEAALAGTPMVVAYKVKPITYFIAKRL 303 (381)
T ss_pred cH---HHHHHHHHHhhccccCceEEecCchHH-HHHHHhhH--HHHhcc-HHHHHHHHhCCCEEEEEeccHHHHHHHHHh
Confidence 43 00000001100000 122233222112 24656666 777777 45789999999999862211 123455555
Q ss_pred Hhhcceeee-eccCCcc--cccCCCCccccHHHHHHHHHHHhcCch-hHHHHHHHHHHHHHHHHhhcCCCCCChHHHHHH
Q 044031 386 VQEMKVAMP-MFLNGEE--ETIGNGEGVVSAERVEERVRELMMGSE-GKALRERSLEMRMMAATAWNNNDGGSSFTAFSN 461 (468)
Q Consensus 386 ~~~~g~g~~-~~~~~~~--~~~~~~~~~~~~~~l~~av~~~l~~~~-~~~~~~~a~~l~~~~~~a~~~~~~g~~~~~~~~ 461 (468)
..-+-+++. +-.++.- |-..++ ++++.|.+++..++.|++ .+++++...+++. .+. .++++..+.+.
T Consensus 304 vk~~yisLpNIi~~~~ivPEliq~~---~~pe~la~~l~~ll~~~~~~~~~~~~~~~l~~----~l~--~~~~~e~aA~~ 374 (381)
T COG0763 304 VKLPYVSLPNILAGREIVPELIQED---CTPENLARALEELLLNGDRREALKEKFRELHQ----YLR--EDPASEIAAQA 374 (381)
T ss_pred ccCCcccchHHhcCCccchHHHhhh---cCHHHHHHHHHHHhcChHhHHHHHHHHHHHHH----HHc--CCcHHHHHHHH
Confidence 433222211 0000000 112234 899999999999999983 4667777666666 444 56788888887
Q ss_pred HHHHhh
Q 044031 462 LFDLWQ 467 (468)
Q Consensus 462 ~~~~~~ 467 (468)
+++.+.
T Consensus 375 vl~~~~ 380 (381)
T COG0763 375 VLELLL 380 (381)
T ss_pred HHHHhc
Confidence 777653
No 107
>cd03792 GT1_Trehalose_phosphorylase Trehalose phosphorylase (TP) reversibly catalyzes trehalose synthesis and degradation from alpha-glucose-1-phosphate (alpha-Glc-1-P) and glucose. The catalyzing activity includes the phosphorolysis of trehalose, which produce alpha-Glc-1-P and glucose, and the subsequent synthesis of trehalose. This family is most closely related to the GT1 family of glycosyltransferases.
Probab=97.72 E-value=0.026 Score=55.50 Aligned_cols=90 Identities=18% Similarity=0.217 Sum_probs=56.8
Q ss_pred CCeEecCCC--CHH---hhhCccCcceEEecC---C-cchHHHHHHhCCcEEecccccchhhHHHHHHhhcceeeeeccC
Q 044031 328 RGLVVKSWA--PQS---TILGHESVGGFVTHC---G-WSSVVEAVTYGVPMIAWPLYAEQFLNSVALVQEMKVAMPMFLN 398 (468)
Q Consensus 328 ~~~~v~~~~--pq~---~il~~~~~~~~ithg---G-~~s~~eal~~GvP~v~~P~~~DQ~~na~~~~~~~g~g~~~~~~ 398 (468)
.++.+..+. ++. .+++.+++ |+.-. | ..++.||+++|+|+|+-...+ ....+.+. ..|+..+
T Consensus 252 ~~v~~~~~~~~~~~~~~~~~~~ad~--~v~~s~~Eg~g~~~lEA~a~G~Pvv~s~~~~----~~~~i~~~-~~g~~~~-- 322 (372)
T cd03792 252 PDIHVLTLPPVSDLEVNALQRASTV--VLQKSIREGFGLTVTEALWKGKPVIAGPVGG----IPLQIEDG-ETGFLVD-- 322 (372)
T ss_pred CCeEEEecCCCCHHHHHHHHHhCeE--EEeCCCccCCCHHHHHHHHcCCCEEEcCCCC----chhhcccC-CceEEeC--
Confidence 456665665 433 35666666 77543 2 349999999999999976433 22334322 4566543
Q ss_pred CcccccCCCCccccHHHHHHHHHHHhcCch-hHHHHHHHHHH
Q 044031 399 GEEETIGNGEGVVSAERVEERVRELMMGSE-GKALRERSLEM 439 (468)
Q Consensus 399 ~~~~~~~~~~~~~~~~~l~~av~~~l~~~~-~~~~~~~a~~l 439 (468)
+.+.+..++.+++++++ .++|.+++++.
T Consensus 323 -------------~~~~~a~~i~~ll~~~~~~~~~~~~a~~~ 351 (372)
T cd03792 323 -------------TVEEAAVRILYLLRDPELRRKMGANAREH 351 (372)
T ss_pred -------------CcHHHHHHHHHHHcCHHHHHHHHHHHHHH
Confidence 23467779999998875 45666666554
No 108
>PF13844 Glyco_transf_41: Glycosyl transferase family 41; PDB: 3PE4_C 3PE3_D 3TAX_C 2XGO_A 2JLB_B 2XGM_A 2VSY_B 2XGS_B 2VSN_A.
Probab=97.71 E-value=0.00048 Score=68.25 Aligned_cols=152 Identities=23% Similarity=0.271 Sum_probs=78.7
Q ss_pred CCceEEeccCCCcCCCHHHHHHHHHHHHhCCCcEEEEEeCCCCccccCCChhHHhh-ccCCCeEecCCCCHHhhh---Cc
Q 044031 269 SGSVVFLCFGSRGTFSAPQLKEIAIGLERSNQRFLWVVRNPSNAAEAELPEGFLER-TKERGLVVKSWAPQSTIL---GH 344 (468)
Q Consensus 269 ~~~~v~vs~GS~~~~~~~~~~~~~~al~~~~~~~l~~~~~~~~~~~~~~~~~~~~~-~~~~~~~v~~~~pq~~il---~~ 344 (468)
++-++|.+|.+....+++.+..-++-|++.+...+|........ +..+-..+.+. +..+.+++.++.++.+-| ..
T Consensus 283 ~d~vvF~~fn~~~KI~p~~l~~W~~IL~~vP~S~L~L~~~~~~~-~~~l~~~~~~~Gv~~~Ri~f~~~~~~~ehl~~~~~ 361 (468)
T PF13844_consen 283 EDAVVFGSFNNLFKISPETLDLWARILKAVPNSRLWLLRFPASG-EARLRRRFAAHGVDPDRIIFSPVAPREEHLRRYQL 361 (468)
T ss_dssp SSSEEEEE-S-GGG--HHHHHHHHHHHHHSTTEEEEEEETSTTH-HHHHHHHHHHTTS-GGGEEEEE---HHHHHHHGGG
T ss_pred CCceEEEecCccccCCHHHHHHHHHHHHhCCCcEEEEeeCCHHH-HHHHHHHHHHcCCChhhEEEcCCCCHHHHHHHhhh
Confidence 44599999999999999999999999999999999988765211 01111111111 123446666777755433 34
Q ss_pred cCcce-EEecCCcchHHHHHHhCCcEEecccccchhhHHHHHHhhcceeeeeccCCcccccCCCCccccHHH-HHHHHHH
Q 044031 345 ESVGG-FVTHCGWSSVVEAVTYGVPMIAWPLYAEQFLNSVALVQEMKVAMPMFLNGEEETIGNGEGVVSAER-VEERVRE 422 (468)
Q Consensus 345 ~~~~~-~ithgG~~s~~eal~~GvP~v~~P~~~DQ~~na~~~~~~~g~g~~~~~~~~~~~~~~~~~~~~~~~-l~~av~~ 422 (468)
.++-+ -...+|.+|++|||+.|||+|.+|--.-.-..+.-+-..+|+.-.+- -+.++ +..|| +
T Consensus 362 ~DI~LDT~p~nG~TTt~dALwmGVPvVTl~G~~~~sR~~aSiL~~lGl~ElIA--------------~s~~eYv~~Av-~ 426 (468)
T PF13844_consen 362 ADICLDTFPYNGGTTTLDALWMGVPVVTLPGETMASRVGASILRALGLPELIA--------------DSEEEYVEIAV-R 426 (468)
T ss_dssp -SEEE--SSS--SHHHHHHHHHT--EEB---SSGGGSHHHHHHHHHT-GGGB---------------SSHHHHHHHHH-H
T ss_pred CCEEeeCCCCCCcHHHHHHHHcCCCEEeccCCCchhHHHHHHHHHcCCchhcC--------------CCHHHHHHHHH-H
Confidence 44421 13457889999999999999999964333333333334557765443 24444 44444 4
Q ss_pred HhcCch-hHHHHHHH
Q 044031 423 LMMGSE-GKALRERS 436 (468)
Q Consensus 423 ~l~~~~-~~~~~~~a 436 (468)
+-+|++ .+.+|++.
T Consensus 427 La~D~~~l~~lR~~L 441 (468)
T PF13844_consen 427 LATDPERLRALRAKL 441 (468)
T ss_dssp HHH-HHHHHHHHHHH
T ss_pred HhCCHHHHHHHHHHH
Confidence 556764 34444443
No 109
>PLN02949 transferase, transferring glycosyl groups
Probab=97.70 E-value=0.057 Score=54.66 Aligned_cols=94 Identities=13% Similarity=0.108 Sum_probs=58.7
Q ss_pred CCCeEecCCCCHHh---hhCccCcceEEe---cCCcc-hHHHHHHhCCcEEecccccchhhHHHHHHhh-cc-eeeeecc
Q 044031 327 ERGLVVKSWAPQST---ILGHESVGGFVT---HCGWS-SVVEAVTYGVPMIAWPLYAEQFLNSVALVQE-MK-VAMPMFL 397 (468)
Q Consensus 327 ~~~~~v~~~~pq~~---il~~~~~~~~it---hgG~~-s~~eal~~GvP~v~~P~~~DQ~~na~~~~~~-~g-~g~~~~~ 397 (468)
.+++.+..++|+.+ +|..+++ +|+ +=|.| ++.||+++|+|+|+....+--. ..+.+. -| .|...
T Consensus 334 ~~~V~f~g~v~~~el~~ll~~a~~--~v~~s~~E~FGivvlEAMA~G~PVIa~~~gGp~~---eIV~~~~~g~tG~l~-- 406 (463)
T PLN02949 334 DGDVEFHKNVSYRDLVRLLGGAVA--GLHSMIDEHFGISVVEYMAAGAVPIAHNSAGPKM---DIVLDEDGQQTGFLA-- 406 (463)
T ss_pred CCcEEEeCCCCHHHHHHHHHhCcE--EEeCCccCCCChHHHHHHHcCCcEEEeCCCCCcc---eeeecCCCCcccccC--
Confidence 45788889998665 5667776 552 22333 7999999999999986543100 011010 01 12211
Q ss_pred CCcccccCCCCccccHHHHHHHHHHHhcC-ch-hHHHHHHHHHHH
Q 044031 398 NGEEETIGNGEGVVSAERVEERVRELMMG-SE-GKALRERSLEMR 440 (468)
Q Consensus 398 ~~~~~~~~~~~~~~~~~~l~~av~~~l~~-~~-~~~~~~~a~~l~ 440 (468)
-+.+++++++.+++++ ++ .++|++++++..
T Consensus 407 -------------~~~~~la~ai~~ll~~~~~~r~~m~~~ar~~~ 438 (463)
T PLN02949 407 -------------TTVEEYADAILEVLRMRETERLEIAAAARKRA 438 (463)
T ss_pred -------------CCHHHHHHHHHHHHhCCHHHHHHHHHHHHHHH
Confidence 2678999999999984 43 556777776644
No 110
>COG5017 Uncharacterized conserved protein [Function unknown]
Probab=97.59 E-value=0.00088 Score=53.43 Aligned_cols=107 Identities=17% Similarity=0.190 Sum_probs=66.5
Q ss_pred EEeccCCCcCCCHHH---HHHHHHHHHhCCCcEEEEEeCCCCccccCCChhHHhhccCCCeEecC--CCCHH-hhhCccC
Q 044031 273 VFLCFGSRGTFSAPQ---LKEIAIGLERSNQRFLWVVRNPSNAAEAELPEGFLERTKERGLVVKS--WAPQS-TILGHES 346 (468)
Q Consensus 273 v~vs~GS~~~~~~~~---~~~~~~al~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~--~~pq~-~il~~~~ 346 (468)
+||+-||.. .+-.. ..++.+-.+....++|..+|.. +..|- ++..+.+ +.+-. .+...++
T Consensus 2 ifVTvGstf-~~f~rlv~k~e~~el~~~i~e~lIvQyGn~-----d~kpv--------agl~v~~F~~~~kiQsli~dar 67 (161)
T COG5017 2 IFVTVGSTF-YPFNRLVLKIEVLELTELIQEELIVQYGNG-----DIKPV--------AGLRVYGFDKEEKIQSLIHDAR 67 (161)
T ss_pred eEEEecCcc-chHHHHHhhHHHHHHHHHhhhheeeeecCC-----Ccccc--------cccEEEeechHHHHHHHhhcce
Confidence 688999983 22221 1122222233445788888875 22221 1233333 44432 3333344
Q ss_pred cceEEecCCcchHHHHHHhCCcEEecccc--------cchhhHHHHHHhhcceeeeec
Q 044031 347 VGGFVTHCGWSSVVEAVTYGVPMIAWPLY--------AEQFLNSVALVQEMKVAMPMF 396 (468)
Q Consensus 347 ~~~~ithgG~~s~~eal~~GvP~v~~P~~--------~DQ~~na~~~~~~~g~g~~~~ 396 (468)
++|+|||.||++.++..++|.|++|-. .+|..-|..+++ ++.=+...
T Consensus 68 --IVISHaG~GSIL~~~rl~kplIv~pr~s~y~elvDdHQvela~klae-~~~vv~~s 122 (161)
T COG5017 68 --IVISHAGEGSILLLLRLDKPLIVVPRSSQYQELVDDHQVELALKLAE-INYVVACS 122 (161)
T ss_pred --EEEeccCcchHHHHhhcCCcEEEEECchhHHHhhhhHHHHHHHHHHh-cCceEEEc
Confidence 599999999999999999999999953 368888888863 46655555
No 111
>PRK15484 lipopolysaccharide 1,2-N-acetylglucosaminetransferase; Provisional
Probab=97.51 E-value=0.0049 Score=60.92 Aligned_cols=93 Identities=11% Similarity=0.126 Sum_probs=62.9
Q ss_pred CCCeEecCCCCHHh---hhCccCcceEEec----CCc-chHHHHHHhCCcEEecccccchhhHHHHHHhhcceeeeeccC
Q 044031 327 ERGLVVKSWAPQST---ILGHESVGGFVTH----CGW-SSVVEAVTYGVPMIAWPLYAEQFLNSVALVQEMKVAMPMFLN 398 (468)
Q Consensus 327 ~~~~~v~~~~pq~~---il~~~~~~~~ith----gG~-~s~~eal~~GvP~v~~P~~~DQ~~na~~~~~~~g~g~~~~~~ 398 (468)
..++.+.+++|+.+ +++.+++ +|.- -|. .+++||+++|+|+|+....+ +...+.+. ..|..+..
T Consensus 256 ~~~v~~~G~~~~~~l~~~~~~aDv--~v~pS~~~E~f~~~~lEAma~G~PVI~s~~gg----~~Eiv~~~-~~G~~l~~- 327 (380)
T PRK15484 256 GDRCIMLGGQPPEKMHNYYPLADL--VVVPSQVEEAFCMVAVEAMAAGKPVLASTKGG----ITEFVLEG-ITGYHLAE- 327 (380)
T ss_pred CCcEEEeCCCCHHHHHHHHHhCCE--EEeCCCCccccccHHHHHHHcCCCEEEeCCCC----cHhhcccC-CceEEEeC-
Confidence 34677778998654 4777777 6543 232 57889999999999987533 33445332 56765531
Q ss_pred CcccccCCCCccccHHHHHHHHHHHhcCchhHHHHHHHHH
Q 044031 399 GEEETIGNGEGVVSAERVEERVRELMMGSEGKALRERSLE 438 (468)
Q Consensus 399 ~~~~~~~~~~~~~~~~~l~~av~~~l~~~~~~~~~~~a~~ 438 (468)
. .+.+++.++|.++++|++..++.+++++
T Consensus 328 --------~---~d~~~la~~I~~ll~d~~~~~~~~~ar~ 356 (380)
T PRK15484 328 --------P---MTSDSIISDINRTLADPELTQIAEQAKD 356 (380)
T ss_pred --------C---CCHHHHHHHHHHHHcCHHHHHHHHHHHH
Confidence 1 5789999999999999854445555443
No 112
>cd04949 GT1_gtfA_like This family is most closely related to the GT1 family of glycosyltransferases and is named after gtfA in Streptococcus gordonii, where it plays a role in the O-linked glycosylation of GspB, a cell surface glycoprotein involved in platelet binding. In general glycosyltransferases catalyze the transfer of sugar moieties from activated donor molecules to specific acceptor molecules, forming glycosidic bonds. The acceptor molecule can be a lipid, a protein, a heterocyclic compound, or another carbohydrate residue. This group of glycosyltransferases is most closely related to the previously defined glycosyltransferase family 1 (GT1). The members of this family may transfer UDP, ADP, GDP, or CMP linked sugars. The diverse enzymatic activities among members of this family reflect a wide range of biological functions. The protein structure available for this family has the GTB topology, one of the two protein topologies observed for nucleotide-sugar-dependent glycosyltra
Probab=97.45 E-value=0.0014 Score=64.58 Aligned_cols=100 Identities=15% Similarity=0.137 Sum_probs=69.7
Q ss_pred CCCeEecCCCCHH-hhhCccCcceEEecC--CcchHHHHHHhCCcEEecccccchhhHHHHHHhhcceeeeeccCCcccc
Q 044031 327 ERGLVVKSWAPQS-TILGHESVGGFVTHC--GWSSVVEAVTYGVPMIAWPLYAEQFLNSVALVQEMKVAMPMFLNGEEET 403 (468)
Q Consensus 327 ~~~~~v~~~~pq~-~il~~~~~~~~ithg--G~~s~~eal~~GvP~v~~P~~~DQ~~na~~~~~~~g~g~~~~~~~~~~~ 403 (468)
..++.+.++.++. .++..+++-++.++. ...++.||+++|+|+|+..... .....+.+. ..|..++.
T Consensus 260 ~~~v~~~g~~~~~~~~~~~ad~~v~~S~~Eg~~~~~lEAma~G~PvI~~~~~~---g~~~~v~~~-~~G~lv~~------ 329 (372)
T cd04949 260 EDYVFLKGYTRDLDEVYQKAQLSLLTSQSEGFGLSLMEALSHGLPVISYDVNY---GPSEIIEDG-ENGYLVPK------ 329 (372)
T ss_pred cceEEEcCCCCCHHHHHhhhhEEEecccccccChHHHHHHhCCCCEEEecCCC---CcHHHcccC-CCceEeCC------
Confidence 3456666665543 567888885555553 3568999999999999975431 123444333 67777763
Q ss_pred cCCCCccccHHHHHHHHHHHhcCch-hHHHHHHHHHHHHHH
Q 044031 404 IGNGEGVVSAERVEERVRELMMGSE-GKALRERSLEMRMMA 443 (468)
Q Consensus 404 ~~~~~~~~~~~~l~~av~~~l~~~~-~~~~~~~a~~l~~~~ 443 (468)
-+.+++.++|.+++.|++ .+++.++|++.++.+
T Consensus 330 -------~d~~~la~~i~~ll~~~~~~~~~~~~a~~~~~~~ 363 (372)
T cd04949 330 -------GDIEALAEAIIELLNDPKLLQKFSEAAYENAERY 363 (372)
T ss_pred -------CcHHHHHHHHHHHHcCHHHHHHHHHHHHHHHHHh
Confidence 478999999999999986 677888887765543
No 113
>cd04950 GT1_like_1 Glycosyltransferases catalyze the transfer of sugar moieties from activated donor molecules to specific acceptor molecules, forming glycosidic bonds. The acceptor molecule can be a lipid, a protein, a heterocyclic compound, or another carbohydrate residue. This group of glycosyltransferases is most closely related to the previously defined glycosyltransferase family 1 (GT1). The members of this family may transfer UDP, ADP, GDP, or CMP linked sugars. The diverse enzymatic activities among members of this family reflect a wide range of biological functions. The protein structure available for this family has the GTB topology, one of the two protein topologies observed for nucleotide-sugar-dependent glycosyltransferases. GTB proteins have distinct N- and C- terminal domains each containing a typical Rossmann fold. The two domains have high structural homology despite minimal sequence homology. The large cleft that separates the two domains includes the catalytic center
Probab=97.22 E-value=0.25 Score=48.60 Aligned_cols=125 Identities=14% Similarity=0.126 Sum_probs=70.6
Q ss_pred eEEeccCCCcC-CCHHHHHHHHHHHHhCCCcEEEEEeCCCCccccCCChhHHhhccCCCeEecCCCCHHh---hhCccCc
Q 044031 272 VVFLCFGSRGT-FSAPQLKEIAIGLERSNQRFLWVVRNPSNAAEAELPEGFLERTKERGLVVKSWAPQST---ILGHESV 347 (468)
Q Consensus 272 ~v~vs~GS~~~-~~~~~~~~~~~al~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~pq~~---il~~~~~ 347 (468)
++++.+|++.. ...+.+.+++. ...+..|+++ |.... .. .........|+.+.+++|+.+ .+.++++
T Consensus 206 ~~i~y~G~l~~~~d~~ll~~la~--~~p~~~~vli-G~~~~----~~--~~~~~~~~~nV~~~G~~~~~~l~~~l~~~Dv 276 (373)
T cd04950 206 PVIGYYGAIAEWLDLELLEALAK--ARPDWSFVLI-GPVDV----SI--DPSALLRLPNVHYLGPKPYKELPAYLAGFDV 276 (373)
T ss_pred CEEEEEeccccccCHHHHHHHHH--HCCCCEEEEE-CCCcC----cc--ChhHhccCCCEEEeCCCCHHHHHHHHHhCCE
Confidence 45555788863 22233333332 1245666654 43200 00 111111246898889998665 5677887
Q ss_pred ceEE------ecCC-cchHHHHHHhCCcEEecccccchhhHHHHHHhhcceeeeeccCCcccccCCCCccccHHHHHHHH
Q 044031 348 GGFV------THCG-WSSVVEAVTYGVPMIAWPLYAEQFLNSVALVQEMKVAMPMFLNGEEETIGNGEGVVSAERVEERV 420 (468)
Q Consensus 348 ~~~i------thgG-~~s~~eal~~GvP~v~~P~~~DQ~~na~~~~~~~g~g~~~~~~~~~~~~~~~~~~~~~~~l~~av 420 (468)
.++- +.++ -+.+.|++++|+|+|+.++ .... +. +.|..+.. -+.+++.++|
T Consensus 277 ~l~P~~~~~~~~~~~P~Kl~EylA~G~PVVat~~-------~~~~-~~-~~~~~~~~-------------~d~~~~~~ai 334 (373)
T cd04950 277 AILPFRLNELTRATSPLKLFEYLAAGKPVVATPL-------PEVR-RY-EDEVVLIA-------------DDPEEFVAAI 334 (373)
T ss_pred EecCCccchhhhcCCcchHHHHhccCCCEEecCc-------HHHH-hh-cCcEEEeC-------------CCHHHHHHHH
Confidence 4432 2233 2459999999999998763 1222 22 22333331 3789999999
Q ss_pred HHHhcCc
Q 044031 421 RELMMGS 427 (468)
Q Consensus 421 ~~~l~~~ 427 (468)
.+++.++
T Consensus 335 ~~~l~~~ 341 (373)
T cd04950 335 EKALLED 341 (373)
T ss_pred HHHHhcC
Confidence 9987654
No 114
>TIGR02918 accessory Sec system glycosylation protein GtfA. Members of this protein family are found only in Gram-positive bacteria of the Firmicutes lineage, including several species of Staphylococcus, Streptococcus, and Lactobacillus. Members are associated with glycosylation of serine-rich glycoproteins exported by the accessory Sec system.
Probab=97.06 E-value=0.012 Score=60.07 Aligned_cols=150 Identities=11% Similarity=0.110 Sum_probs=86.4
Q ss_pred eEEeccCCCcCCCHHHHHHHHHHHHh-----CCCcEEEEEeCCCCccccCCChhHHhhc----cCCCeEecCCCCHHhhh
Q 044031 272 VVFLCFGSRGTFSAPQLKEIAIGLER-----SNQRFLWVVRNPSNAAEAELPEGFLERT----KERGLVVKSWAPQSTIL 342 (468)
Q Consensus 272 ~v~vs~GS~~~~~~~~~~~~~~al~~-----~~~~~l~~~~~~~~~~~~~~~~~~~~~~----~~~~~~v~~~~pq~~il 342 (468)
.+++..|.+. ..+.+..+++|+.. .+.+ ++.+|.+. ..+.+.+.. ..+.+...++.+-..++
T Consensus 320 ~~il~vGrl~--~~Kg~~~li~A~~~l~~~~p~~~-l~i~G~G~------~~~~l~~~i~~~~l~~~V~f~G~~~~~~~~ 390 (500)
T TIGR02918 320 FSIITASRLA--KEKHIDWLVKAVVKAKKSVPELT-FDIYGEGG------EKQKLQKIINENQAQDYIHLKGHRNLSEVY 390 (500)
T ss_pred eEEEEEeccc--cccCHHHHHHHHHHHHhhCCCeE-EEEEECch------hHHHHHHHHHHcCCCCeEEEcCCCCHHHHH
Confidence 4556667775 22334445555532 2333 34456541 012222211 23557777888888889
Q ss_pred CccCcceEEe---cCC-cchHHHHHHhCCcEEecccccchhhHHHHHHhhcceeeeeccCCcccccCCCCcccc-HHHHH
Q 044031 343 GHESVGGFVT---HCG-WSSVVEAVTYGVPMIAWPLYAEQFLNSVALVQEMKVAMPMFLNGEEETIGNGEGVVS-AERVE 417 (468)
Q Consensus 343 ~~~~~~~~it---hgG-~~s~~eal~~GvP~v~~P~~~DQ~~na~~~~~~~g~g~~~~~~~~~~~~~~~~~~~~-~~~l~ 417 (468)
..+++ ||. .=| ..+++||+++|+|+|+.-..+ -+...+. .-.-|..++.+ ...+..-+ .+.++
T Consensus 391 ~~adv--~v~pS~~Egfgl~~lEAma~G~PVI~~dv~~---G~~eiI~-~g~nG~lv~~~------~~~~d~~~~~~~la 458 (500)
T TIGR02918 391 KDYEL--YLSASTSEGFGLTLMEAVGSGLGMIGFDVNY---GNPTFIE-DNKNGYLIPID------EEEDDEDQIITALA 458 (500)
T ss_pred HhCCE--EEEcCccccccHHHHHHHHhCCCEEEecCCC---CCHHHcc-CCCCEEEEeCC------ccccchhHHHHHHH
Confidence 88888 554 233 458999999999999975421 1334443 31457666520 00000012 77899
Q ss_pred HHHHHHhcCchhHHHHHHHHHHHHH
Q 044031 418 ERVRELMMGSEGKALRERSLEMRMM 442 (468)
Q Consensus 418 ~av~~~l~~~~~~~~~~~a~~l~~~ 442 (468)
++|.++++++...+|.++|.+.++.
T Consensus 459 ~~I~~ll~~~~~~~~~~~a~~~a~~ 483 (500)
T TIGR02918 459 EKIVEYFNSNDIDAFHEYSYQIAEG 483 (500)
T ss_pred HHHHHHhChHHHHHHHHHHHHHHHh
Confidence 9999999654467788888775543
No 115
>PF13692 Glyco_trans_1_4: Glycosyl transferases group 1; PDB: 3OY2_A 3OY7_B 2Q6V_A 2HY7_A 3CV3_A 3CUY_A.
Probab=97.02 E-value=0.0024 Score=52.64 Aligned_cols=125 Identities=16% Similarity=0.195 Sum_probs=65.4
Q ss_pred eEEeccCCCcC-CCHHHHHH-HHHHHHhC--CCcEEEEEeCCCCccccCCChhHHhhccCCCeEecCCCCH-HhhhCccC
Q 044031 272 VVFLCFGSRGT-FSAPQLKE-IAIGLERS--NQRFLWVVRNPSNAAEAELPEGFLERTKERGLVVKSWAPQ-STILGHES 346 (468)
Q Consensus 272 ~v~vs~GS~~~-~~~~~~~~-~~~al~~~--~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~pq-~~il~~~~ 346 (468)
+.++++|+... ...+.+.+ +++.+.+. +..+.. +|.. |+.+.+. ..+++.+.+|+++ .+++..++
T Consensus 3 ~~i~~~g~~~~~k~~~~li~~~~~~l~~~~p~~~l~i-~G~~--------~~~l~~~-~~~~v~~~g~~~e~~~~l~~~d 72 (135)
T PF13692_consen 3 LYIGYLGRIRPDKGLEELIEAALERLKEKHPDIELII-IGNG--------PDELKRL-RRPNVRFHGFVEELPEILAAAD 72 (135)
T ss_dssp EEEE--S-SSGGGTHHHHHH-HHHHHHHHSTTEEEEE-ECES--------S-HHCCH-HHCTEEEE-S-HHHHHHHHC-S
T ss_pred ccccccccccccccccchhhhHHHHHHHHCcCEEEEE-EeCC--------HHHHHHh-cCCCEEEcCCHHHHHHHHHhCC
Confidence 34555565542 23344444 55556543 334333 3332 2222222 2458888899863 35788888
Q ss_pred cceEEecCC---cchHHHHHHhCCcEEecccccchhhHHHHHHhhcceeeeeccCCcccccCCCCccccHHHHHHHHHHH
Q 044031 347 VGGFVTHCG---WSSVVEAVTYGVPMIAWPLYAEQFLNSVALVQEMKVAMPMFLNGEEETIGNGEGVVSAERVEERVREL 423 (468)
Q Consensus 347 ~~~~ithgG---~~s~~eal~~GvP~v~~P~~~DQ~~na~~~~~~~g~g~~~~~~~~~~~~~~~~~~~~~~~l~~av~~~ 423 (468)
+.+..+..+ .+++.|++++|+|+|+.+.. ..... +..+.|..+. -+.+++.+++.++
T Consensus 73 v~l~p~~~~~~~~~k~~e~~~~G~pvi~~~~~-----~~~~~-~~~~~~~~~~--------------~~~~~l~~~i~~l 132 (135)
T PF13692_consen 73 VGLIPSRFNEGFPNKLLEAMAAGKPVIASDNG-----AEGIV-EEDGCGVLVA--------------NDPEELAEAIERL 132 (135)
T ss_dssp EEEE-BSS-SCC-HHHHHHHCTT--EEEEHHH-----CHCHS----SEEEE-T--------------T-HHHHHHHHHHH
T ss_pred EEEEEeeCCCcCcHHHHHHHHhCCCEEECCcc-----hhhhe-eecCCeEEEC--------------CCHHHHHHHHHHH
Confidence 877655322 47999999999999998761 12222 2237776663 5899999999999
Q ss_pred hcC
Q 044031 424 MMG 426 (468)
Q Consensus 424 l~~ 426 (468)
++|
T Consensus 133 ~~d 135 (135)
T PF13692_consen 133 LND 135 (135)
T ss_dssp HH-
T ss_pred hcC
Confidence 865
No 116
>cd03813 GT1_like_3 This family is most closely related to the GT1 family of glycosyltransferases. Glycosyltransferases catalyze the transfer of sugar moieties from activated donor molecules to specific acceptor molecules, forming glycosidic bonds. The acceptor molecule can be a lipid, a protein, a heterocyclic compound, or another carbohydrate residue. This group of glycosyltransferases is most closely related to the previously defined glycosyltransferase family 1 (GT1). The members of this family may transfer UDP, ADP, GDP, or CMP linked sugars. The diverse enzymatic activities among members of this family reflect a wide range of biological functions. The protein structure available for this family has the GTB topology, one of the two protein topologies observed for nucleotide-sugar-dependent glycosyltransferases. GTB proteins have distinct N- and C- terminal domains each containing a typical Rossmann fold. The two domains have high structural homology despite minimal sequence homolog
Probab=96.97 E-value=0.015 Score=59.36 Aligned_cols=93 Identities=15% Similarity=0.149 Sum_probs=63.5
Q ss_pred CCCeEecCCCCHHhhhCccCcceEEec----CCcchHHHHHHhCCcEEecccccchhhHHHHHHhh----c-ceeeeecc
Q 044031 327 ERGLVVKSWAPQSTILGHESVGGFVTH----CGWSSVVEAVTYGVPMIAWPLYAEQFLNSVALVQE----M-KVAMPMFL 397 (468)
Q Consensus 327 ~~~~~v~~~~pq~~il~~~~~~~~ith----gG~~s~~eal~~GvP~v~~P~~~DQ~~na~~~~~~----~-g~g~~~~~ 397 (468)
.+++.+.+...-.+++..+++ +|.- |--+++.||+++|+|+|+-.. ......+.+. + ..|..++.
T Consensus 353 ~~~V~f~G~~~v~~~l~~aDv--~vlpS~~Eg~p~~vlEAma~G~PVVatd~----g~~~elv~~~~~~~~g~~G~lv~~ 426 (475)
T cd03813 353 EDNVKFTGFQNVKEYLPKLDV--LVLTSISEGQPLVILEAMAAGIPVVATDV----GSCRELIEGADDEALGPAGEVVPP 426 (475)
T ss_pred CCeEEEcCCccHHHHHHhCCE--EEeCchhhcCChHHHHHHHcCCCEEECCC----CChHHHhcCCcccccCCceEEECC
Confidence 357777776666677877777 5432 334689999999999999543 3333444321 1 26777764
Q ss_pred CCcccccCCCCccccHHHHHHHHHHHhcCch-hHHHHHHHHH
Q 044031 398 NGEEETIGNGEGVVSAERVEERVRELMMGSE-GKALRERSLE 438 (468)
Q Consensus 398 ~~~~~~~~~~~~~~~~~~l~~av~~~l~~~~-~~~~~~~a~~ 438 (468)
-+.+++.+++.++++|++ .+++.+++++
T Consensus 427 -------------~d~~~la~ai~~ll~~~~~~~~~~~~a~~ 455 (475)
T cd03813 427 -------------ADPEALARAILRLLKDPELRRAMGEAGRK 455 (475)
T ss_pred -------------CCHHHHHHHHHHHhcCHHHHHHHHHHHHH
Confidence 578899999999999985 4556666554
No 117
>PLN02501 digalactosyldiacylglycerol synthase
Probab=96.95 E-value=0.58 Score=48.96 Aligned_cols=76 Identities=14% Similarity=0.147 Sum_probs=50.9
Q ss_pred eEecCCCCHH-hhhCccCcceEEec---CC-cchHHHHHHhCCcEEecccccchhhHHHHHHhhcceeeeeccCCccccc
Q 044031 330 LVVKSWAPQS-TILGHESVGGFVTH---CG-WSSVVEAVTYGVPMIAWPLYAEQFLNSVALVQEMKVAMPMFLNGEEETI 404 (468)
Q Consensus 330 ~~v~~~~pq~-~il~~~~~~~~ith---gG-~~s~~eal~~GvP~v~~P~~~DQ~~na~~~~~~~g~g~~~~~~~~~~~~ 404 (468)
+.+.++.++. .+++.+++ ||.= =| -++++||+++|+|+|+.-..+... + .. |.+..+.
T Consensus 603 V~FLG~~dd~~~lyasaDV--FVlPS~sEgFGlVlLEAMA~GlPVVATd~pG~e~-----V-~~-g~nGll~-------- 665 (794)
T PLN02501 603 LNFLKGRDHADDSLHGYKV--FINPSISDVLCTATAEALAMGKFVVCADHPSNEF-----F-RS-FPNCLTY-------- 665 (794)
T ss_pred EEecCCCCCHHHHHHhCCE--EEECCCcccchHHHHHHHHcCCCEEEecCCCCce-----E-ee-cCCeEec--------
Confidence 5555676654 47877877 6642 22 458999999999999987755321 2 12 2222222
Q ss_pred CCCCccccHHHHHHHHHHHhcCch
Q 044031 405 GNGEGVVSAERVEERVRELMMGSE 428 (468)
Q Consensus 405 ~~~~~~~~~~~l~~av~~~l~~~~ 428 (468)
-+.+++.++|.++|.++.
T Consensus 666 ------~D~EafAeAI~~LLsd~~ 683 (794)
T PLN02501 666 ------KTSEDFVAKVKEALANEP 683 (794)
T ss_pred ------CCHHHHHHHHHHHHhCch
Confidence 267899999999998773
No 118
>PRK09814 beta-1,6-galactofuranosyltransferase; Provisional
Probab=96.54 E-value=0.018 Score=55.82 Aligned_cols=112 Identities=13% Similarity=0.202 Sum_probs=75.6
Q ss_pred CCCeEecCCCCHHhhhCc--cCcceEEecC-------Cc------chHHHHHHhCCcEEecccccchhhHHHHHHhhcce
Q 044031 327 ERGLVVKSWAPQSTILGH--ESVGGFVTHC-------GW------SSVVEAVTYGVPMIAWPLYAEQFLNSVALVQEMKV 391 (468)
Q Consensus 327 ~~~~~v~~~~pq~~il~~--~~~~~~ithg-------G~------~s~~eal~~GvP~v~~P~~~DQ~~na~~~~~~~g~ 391 (468)
.+|+.+.+|+|+.++..+ .+.+++...- .+ +-+.+.+++|+|+|+++ +...+..+.+. ++
T Consensus 206 ~~~V~f~G~~~~eel~~~l~~~~gLv~~~~~~~~~~~~y~~~~~P~K~~~ymA~G~PVI~~~----~~~~~~~V~~~-~~ 280 (333)
T PRK09814 206 SANISYKGWFDPEELPNELSKGFGLVWDGDTNDGEYGEYYKYNNPHKLSLYLAAGLPVIVWS----KAAIADFIVEN-GL 280 (333)
T ss_pred CCCeEEecCCCHHHHHHHHhcCcCeEEcCCCCCccchhhhhccchHHHHHHHHCCCCEEECC----CccHHHHHHhC-Cc
Confidence 457888899998875332 1443333211 11 12778899999999975 45677778654 89
Q ss_pred eeeeccCCcccccCCCCccccHHHHHHHHHHHhcCchhHHHHHHHHHHHHHHHHhhcCCCCCChHHHHHHHHHH
Q 044031 392 AMPMFLNGEEETIGNGEGVVSAERVEERVRELMMGSEGKALRERSLEMRMMAATAWNNNDGGSSFTAFSNLFDL 465 (468)
Q Consensus 392 g~~~~~~~~~~~~~~~~~~~~~~~l~~av~~~l~~~~~~~~~~~a~~l~~~~~~a~~~~~~g~~~~~~~~~~~~ 465 (468)
|+.++ +.+++.+++.++ .+++.++|++|++++++.++. |---.+++.+++..
T Consensus 281 G~~v~---------------~~~el~~~l~~~-~~~~~~~m~~n~~~~~~~~~~------g~~~~~~~~~~~~~ 332 (333)
T PRK09814 281 GFVVD---------------SLEELPEIIDNI-TEEEYQEMVENVKKISKLLRN------GYFTKKALVDAIKE 332 (333)
T ss_pred eEEeC---------------CHHHHHHHHHhc-CHHHHHHHHHHHHHHHHHHhc------chhHHHHHHHHHhc
Confidence 99986 345788888875 344467899999999988774 44445566655543
No 119
>PHA01633 putative glycosyl transferase group 1
Probab=96.41 E-value=0.12 Score=49.74 Aligned_cols=85 Identities=12% Similarity=0.069 Sum_probs=53.7
Q ss_pred CCCeEec---CCCCHH---hhhCccCcceEEec---CC-cchHHHHHHhCCcEEeccc------ccch------hhHHHH
Q 044031 327 ERGLVVK---SWAPQS---TILGHESVGGFVTH---CG-WSSVVEAVTYGVPMIAWPL------YAEQ------FLNSVA 384 (468)
Q Consensus 327 ~~~~~v~---~~~pq~---~il~~~~~~~~ith---gG-~~s~~eal~~GvP~v~~P~------~~DQ------~~na~~ 384 (468)
..++.+. +++++. .+++.+++ ||.- =| -.+++||+++|+|+|+--. .+|+ ..+...
T Consensus 200 ~~~V~f~g~~G~~~~~dl~~~y~~aDi--fV~PS~~EgfGlvlLEAMA~G~PVVas~~~~l~Ei~g~~~~~Li~~~~v~~ 277 (335)
T PHA01633 200 PANVHFVAEFGHNSREYIFAFYGAMDF--TIVPSGTEGFGMPVLESMAMGTPVIHQLMPPLDEFTSWQWNLLIKSSKVEE 277 (335)
T ss_pred CCcEEEEecCCCCCHHHHHHHHHhCCE--EEECCccccCCHHHHHHHHcCCCEEEccCCCceeecCCccceeeCCCCHHH
Confidence 3456665 455654 45666776 7752 24 3578999999999998633 2333 233333
Q ss_pred HHh-hcceeeeeccCCcccccCCCCccccHHHHHHHHHHHhcC
Q 044031 385 LVQ-EMKVAMPMFLNGEEETIGNGEGVVSAERVEERVRELMMG 426 (468)
Q Consensus 385 ~~~-~~g~g~~~~~~~~~~~~~~~~~~~~~~~l~~av~~~l~~ 426 (468)
..+ .-|.|..++. .+.+++.+++.+++..
T Consensus 278 ~~~~~~g~g~~~~~-------------~d~~~la~ai~~~~~~ 307 (335)
T PHA01633 278 YYDKEHGQKWKIHK-------------FQIEDMANAIILAFEL 307 (335)
T ss_pred hcCcccCceeeecC-------------CCHHHHHHHHHHHHhc
Confidence 221 1266666663 7999999999999544
No 120
>COG3914 Spy Predicted O-linked N-acetylglucosamine transferase, SPINDLY family [Posttranslational modification, protein turnover, chaperones]
Probab=95.95 E-value=0.15 Score=51.22 Aligned_cols=119 Identities=18% Similarity=0.226 Sum_probs=79.7
Q ss_pred CCceEEeccCCCcCCCHHHHHHHHHHHHhCCCcEEEEEeCCCCccccCCChhHH---hh--ccCCCeEecCCCCHHhhhC
Q 044031 269 SGSVVFLCFGSRGTFSAPQLKEIAIGLERSNQRFLWVVRNPSNAAEAELPEGFL---ER--TKERGLVVKSWAPQSTILG 343 (468)
Q Consensus 269 ~~~~v~vs~GS~~~~~~~~~~~~~~al~~~~~~~l~~~~~~~~~~~~~~~~~~~---~~--~~~~~~~v~~~~pq~~il~ 343 (468)
++-+||+||+......++.+..=+.-|+..+-.++|..+++++++ +...++ ++ +....+++.+-.|...-++
T Consensus 428 ~~avVf~c~~n~~K~~pev~~~wmqIL~~vP~Svl~L~~~~~~~~---~~~~l~~la~~~Gv~~eRL~f~p~~~~~~h~a 504 (620)
T COG3914 428 EDAVVFCCFNNYFKITPEVFALWMQILSAVPNSVLLLKAGGDDAE---INARLRDLAEREGVDSERLRFLPPAPNEDHRA 504 (620)
T ss_pred CCeEEEEecCCcccCCHHHHHHHHHHHHhCCCcEEEEecCCCcHH---HHHHHHHHHHHcCCChhheeecCCCCCHHHHH
Confidence 445999999999988999988888888888999999888753211 111111 11 1234456666666443332
Q ss_pred -ccCcceEEe---cCCcchHHHHHHhCCcEEecccccchhh--HHHHHHhhccee
Q 044031 344 -HESVGGFVT---HCGWSSVVEAVTYGVPMIAWPLYAEQFL--NSVALVQEMKVA 392 (468)
Q Consensus 344 -~~~~~~~it---hgG~~s~~eal~~GvP~v~~P~~~DQ~~--na~~~~~~~g~g 392 (468)
+.-+++|+. =+|+.|+.|+|+.|||+|.++ ++|+- |+.-+....|+-
T Consensus 505 ~~~iADlvLDTyPY~g~TTa~daLwm~vPVlT~~--G~~FasR~~~si~~~agi~ 557 (620)
T COG3914 505 RYGIADLVLDTYPYGGHTTASDALWMGVPVLTRV--GEQFASRNGASIATNAGIP 557 (620)
T ss_pred hhchhheeeecccCCCccchHHHHHhcCceeeec--cHHHHHhhhHHHHHhcCCc
Confidence 222233654 589999999999999999998 77775 555555443443
No 121
>KOG4626 consensus O-linked N-acetylglucosamine transferase OGT [Carbohydrate transport and metabolism; Posttranslational modification, protein turnover, chaperones; Signal transduction mechanisms]
Probab=95.92 E-value=0.053 Score=54.59 Aligned_cols=126 Identities=17% Similarity=0.203 Sum_probs=76.8
Q ss_pred CCceEEeccCCCcCCCHHHHHHHHHHHHhCCCcEEEEEeCCCCccccCCChhHHhh-ccCCCeEecCCCCHH-----hhh
Q 044031 269 SGSVVFLCFGSRGTFSAPQLKEIAIGLERSNQRFLWVVRNPSNAAEAELPEGFLER-TKERGLVVKSWAPQS-----TIL 342 (468)
Q Consensus 269 ~~~~v~vs~GS~~~~~~~~~~~~~~al~~~~~~~l~~~~~~~~~~~~~~~~~~~~~-~~~~~~~v~~~~pq~-----~il 342 (468)
++-+||.+|--....+++.++.-++-|++-+-.++|..+.+..++ ..+-....+. +.++.+++.+-+.-. ..|
T Consensus 757 ~d~vvf~~FNqLyKidP~~l~~W~~ILk~VPnS~LwllrfPa~ge-~rf~ty~~~~Gl~p~riifs~va~k~eHvrr~~L 835 (966)
T KOG4626|consen 757 EDAVVFCNFNQLYKIDPSTLQMWANILKRVPNSVLWLLRFPAVGE-QRFRTYAEQLGLEPDRIIFSPVAAKEEHVRRGQL 835 (966)
T ss_pred CCeEEEeechhhhcCCHHHHHHHHHHHHhCCcceeEEEeccccch-HHHHHHHHHhCCCccceeeccccchHHHHHhhhh
Confidence 344899999888888999999999999999999999999871101 0000000111 113344443433311 123
Q ss_pred CccCcceEEecCCcchHHHHHHhCCcEEecccccchhhHHHHHHhhcceeeeec
Q 044031 343 GHESVGGFVTHCGWSSVVEAVTYGVPMIAWPLYAEQFLNSVALVQEMKVAMPMF 396 (468)
Q Consensus 343 ~~~~~~~~ithgG~~s~~eal~~GvP~v~~P~~~DQ~~na~~~~~~~g~g~~~~ 396 (468)
+.-.++-+.+ .|+.|.++.++.|||||.+|.-.---..|..+.-.+|+|-.+-
T Consensus 836 aDv~LDTplc-nGhTTg~dvLw~GvPmVTmpge~lAsrVa~Sll~~~Gl~hlia 888 (966)
T KOG4626|consen 836 ADVCLDTPLC-NGHTTGMDVLWAGVPMVTMPGETLASRVAASLLTALGLGHLIA 888 (966)
T ss_pred hhhcccCcCc-CCcccchhhhccCCceeecccHHHHHHHHHHHHHHcccHHHHh
Confidence 2222222443 4789999999999999999975433333333333568888554
No 122
>PRK10125 putative glycosyl transferase; Provisional
Probab=95.90 E-value=2.1 Score=42.63 Aligned_cols=105 Identities=14% Similarity=0.057 Sum_probs=57.0
Q ss_pred eEEeccCCCcCCCHHHHHHHHHHHHhCCCc-EEEEEeCCCCccccCCChhHHhhccCCCeEecCCC-CH---HhhhCccC
Q 044031 272 VVFLCFGSRGTFSAPQLKEIAIGLERSNQR-FLWVVRNPSNAAEAELPEGFLERTKERGLVVKSWA-PQ---STILGHES 346 (468)
Q Consensus 272 ~v~vs~GS~~~~~~~~~~~~~~al~~~~~~-~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~-pq---~~il~~~~ 346 (468)
.+++..|.......+.+..+++++...+.. -++.+|... ... ..++....+. ++ ..+++.++
T Consensus 242 ~~il~v~~~~~~~~Kg~~~li~A~~~l~~~~~L~ivG~g~----~~~---------~~~v~~~g~~~~~~~l~~~y~~aD 308 (405)
T PRK10125 242 PKIAVVAHDLRYDGKTDQQLVREMMALGDKIELHTFGKFS----PFT---------AGNVVNHGFETDKRKLMSALNQMD 308 (405)
T ss_pred CEEEEEEeccccCCccHHHHHHHHHhCCCCeEEEEEcCCC----ccc---------ccceEEecCcCCHHHHHHHHHhCC
Confidence 334444543222233356688888775433 345556430 000 1233333444 22 23455566
Q ss_pred cceEEec----CCcchHHHHHHhCCcEEecccccchhhHHHHHHhhcceeeeecc
Q 044031 347 VGGFVTH----CGWSSVVEAVTYGVPMIAWPLYAEQFLNSVALVQEMKVAMPMFL 397 (468)
Q Consensus 347 ~~~~ith----gG~~s~~eal~~GvP~v~~P~~~DQ~~na~~~~~~~g~g~~~~~ 397 (468)
+ ||.- +--++++||+++|+|+|+-...+ - ...+ +. +-|+.++.
T Consensus 309 v--fV~pS~~Egfp~vilEAmA~G~PVVat~~gG-~---~Eiv-~~-~~G~lv~~ 355 (405)
T PRK10125 309 A--LVFSSRVDNYPLILCEALSIGVPVIATHSDA-A---REVL-QK-SGGKTVSE 355 (405)
T ss_pred E--EEECCccccCcCHHHHHHHcCCCEEEeCCCC-h---HHhE-eC-CcEEEECC
Confidence 5 6642 33568999999999999998765 1 2223 34 56888874
No 123
>PRK10017 colanic acid biosynthesis protein; Provisional
Probab=95.62 E-value=0.38 Score=48.04 Aligned_cols=167 Identities=13% Similarity=0.165 Sum_probs=94.3
Q ss_pred HHhhcCCCCCceEEeccCCCcCC------C----HHHHHHHHHHHHhCCCcEEEEEeCC-CCc-cccC--CChhHHhhcc
Q 044031 261 LTWLDSQPSGSVVFLCFGSRGTF------S----APQLKEIAIGLERSNQRFLWVVRNP-SNA-AEAE--LPEGFLERTK 326 (468)
Q Consensus 261 ~~~l~~~~~~~~v~vs~GS~~~~------~----~~~~~~~~~al~~~~~~~l~~~~~~-~~~-~~~~--~~~~~~~~~~ 326 (468)
..|+.....++.|-|+.-..... . .+.+.++++.|...|.++++..-.. .+. ...+ .-..+.+.+.
T Consensus 225 ~~~~~~~~~~~~Vgisvr~~~~~~~~~~~~~~~Y~~~la~~i~~Li~~g~~Vv~lp~~~~~~~~~~dD~~~~~~l~~~~~ 304 (426)
T PRK10017 225 QHWLDVAAQQKTVAITLRELAPFDKRLGTTQQAYEKAFAGVVNRIIDEGYQVIALSTCTGIDSYNKDDRMVALNLRQHVS 304 (426)
T ss_pred hhhhcccccCCEEEEEecccccccccccccHHHHHHHHHHHHHHHHHCCCeEEEEecccCccCCCCchHHHHHHHHHhcc
Confidence 44654433445787776543211 1 1334456666666788877665421 000 0000 1122333333
Q ss_pred CC--CeEecC-CCCHH--hhhCccCcceEEecCCcchHHHHHHhCCcEEecccccchhhHHHHHHhhcceeee-eccCCc
Q 044031 327 ER--GLVVKS-WAPQS--TILGHESVGGFVTHCGWSSVVEAVTYGVPMIAWPLYAEQFLNSVALVQEMKVAMP-MFLNGE 400 (468)
Q Consensus 327 ~~--~~~v~~-~~pq~--~il~~~~~~~~ithgG~~s~~eal~~GvP~v~~P~~~DQ~~na~~~~~~~g~g~~-~~~~~~ 400 (468)
.+ ..++.+ +-+.+ .+++++++ +|..= .-++.-|+..|||++++++ | +.....+ +.+|..-. .+.
T Consensus 305 ~~~~~~vi~~~~~~~e~~~iIs~~dl--~ig~R-lHa~I~a~~~gvP~i~i~Y--~-~K~~~~~-~~lg~~~~~~~~--- 374 (426)
T PRK10017 305 DPARYHVVMDELNDLEMGKILGACEL--TVGTR-LHSAIISMNFGTPAIAINY--E-HKSAGIM-QQLGLPEMAIDI--- 374 (426)
T ss_pred cccceeEecCCCChHHHHHHHhhCCE--EEEec-chHHHHHHHcCCCEEEeee--h-HHHHHHH-HHcCCccEEech---
Confidence 22 123332 33433 67888876 77432 3366778999999999998 2 4444445 45677744 442
Q ss_pred ccccCCCCccccHHHHHHHHHHHhcCch--hHHHHHHHHHHHHHHHH
Q 044031 401 EETIGNGEGVVSAERVEERVRELMMGSE--GKALRERSLEMRMMAAT 445 (468)
Q Consensus 401 ~~~~~~~~~~~~~~~l~~av~~~l~~~~--~~~~~~~a~~l~~~~~~ 445 (468)
++ ++.++|.+.+.++++|.+ .++++++..++++...+
T Consensus 375 -----~~---l~~~~Li~~v~~~~~~r~~~~~~l~~~v~~~r~~~~~ 413 (426)
T PRK10017 375 -----RH---LLDGSLQAMVADTLGQLPALNARLAEAVSRERQTGMQ 413 (426)
T ss_pred -----hh---CCHHHHHHHHHHHHhCHHHHHHHHHHHHHHHHHHHHH
Confidence 45 888999999999998865 34556666665554443
No 124
>PRK14098 glycogen synthase; Provisional
Probab=95.55 E-value=0.25 Score=50.54 Aligned_cols=130 Identities=12% Similarity=0.074 Sum_probs=73.2
Q ss_pred eEEeccCCCcCC-CHHHHHHHHHHHHhCCCcEEEEEeCCCCccccCCChhHHhhc--cCCCeEecCCCCHH---hhhCcc
Q 044031 272 VVFLCFGSRGTF-SAPQLKEIAIGLERSNQRFLWVVRNPSNAAEAELPEGFLERT--KERGLVVKSWAPQS---TILGHE 345 (468)
Q Consensus 272 ~v~vs~GS~~~~-~~~~~~~~~~al~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~--~~~~~~v~~~~pq~---~il~~~ 345 (468)
++++..|.+... ..+.+.+.+..+...+.+++++ |.+. ...-+.+.+.. .+.++.+..+.+.. .+++.+
T Consensus 308 ~~i~~vgRl~~~KG~d~li~a~~~l~~~~~~lviv-G~G~----~~~~~~l~~l~~~~~~~V~~~g~~~~~~~~~~~a~a 382 (489)
T PRK14098 308 PLVGVIINFDDFQGAELLAESLEKLVELDIQLVIC-GSGD----KEYEKRFQDFAEEHPEQVSVQTEFTDAFFHLAIAGL 382 (489)
T ss_pred CEEEEeccccccCcHHHHHHHHHHHHhcCcEEEEE-eCCC----HHHHHHHHHHHHHCCCCEEEEEecCHHHHHHHHHhC
Confidence 566666777532 3344444444444456666554 4331 00111222211 23567777777764 567777
Q ss_pred CcceEEecC---Cc-chHHHHHHhCCcEEeccccc--chhhHHHHHHhhcceeeeeccCCcccccCCCCccccHHHHHHH
Q 044031 346 SVGGFVTHC---GW-SSVVEAVTYGVPMIAWPLYA--EQFLNSVALVQEMKVAMPMFLNGEEETIGNGEGVVSAERVEER 419 (468)
Q Consensus 346 ~~~~~ithg---G~-~s~~eal~~GvP~v~~P~~~--DQ~~na~~~~~~~g~g~~~~~~~~~~~~~~~~~~~~~~~l~~a 419 (468)
++ |+.-. |. .+.+||+++|+|.|+....+ |.-.+ ...+. +.|..++. .+.+.+.++
T Consensus 383 Di--~l~PS~~E~~Gl~~lEAma~G~ppVv~~~GGl~d~v~~--~~~~~-~~G~l~~~-------------~d~~~la~a 444 (489)
T PRK14098 383 DM--LLMPGKIESCGMLQMFAMSYGTIPVAYAGGGIVETIEE--VSEDK-GSGFIFHD-------------YTPEALVAK 444 (489)
T ss_pred CE--EEeCCCCCCchHHHHHHHhCCCCeEEecCCCCceeeec--CCCCC-CceeEeCC-------------CCHHHHHHH
Confidence 77 66432 22 37889999999988876543 22111 11112 67777763 578899999
Q ss_pred HHHHh
Q 044031 420 VRELM 424 (468)
Q Consensus 420 v~~~l 424 (468)
|.+++
T Consensus 445 i~~~l 449 (489)
T PRK14098 445 LGEAL 449 (489)
T ss_pred HHHHH
Confidence 98876
No 125
>cd03791 GT1_Glycogen_synthase_DULL1_like This family is most closely related to the GT1 family of glycosyltransferases. Glycogen synthase catalyzes the formation and elongation of the alpha-1,4-glucose backbone using ADP-glucose, the second and key step of glycogen biosynthesis. This family includes starch synthases of plants, such as DULL1 in Zea mays and glycogen synthases of various organisms.
Probab=95.42 E-value=0.18 Score=51.41 Aligned_cols=133 Identities=14% Similarity=0.057 Sum_probs=71.4
Q ss_pred eEEeccCCCcCC-CHHHHHHHHHHHHhCCCcEEEEEeCCCCccccCCChhHHhhcc--CCCeEecCCCCHH---hhhCcc
Q 044031 272 VVFLCFGSRGTF-SAPQLKEIAIGLERSNQRFLWVVRNPSNAAEAELPEGFLERTK--ERGLVVKSWAPQS---TILGHE 345 (468)
Q Consensus 272 ~v~vs~GS~~~~-~~~~~~~~~~al~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~--~~~~~v~~~~pq~---~il~~~ 345 (468)
.+++..|.+... ..+.+.+.+..+...+.+++++-.+. ....+.+.+... ..++++..-.++. .+++.+
T Consensus 297 ~~i~~vGrl~~~Kg~~~li~a~~~l~~~~~~lvi~G~g~-----~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~a 371 (476)
T cd03791 297 PLFGFVGRLTEQKGIDLLLEALPELLELGGQLVILGSGD-----PEYEEALRELAARYPGRVAVLIGYDEALAHLIYAGA 371 (476)
T ss_pred CEEEEEeeccccccHHHHHHHHHHHHHcCcEEEEEecCC-----HHHHHHHHHHHHhCCCcEEEEEeCCHHHHHHHHHhC
Confidence 666677887622 23444444555545556666543322 001112221111 3455433333333 356666
Q ss_pred CcceEEec---CCc-chHHHHHHhCCcEEeccccc--chhhHHHHHHhhcceeeeeccCCcccccCCCCccccHHHHHHH
Q 044031 346 SVGGFVTH---CGW-SSVVEAVTYGVPMIAWPLYA--EQFLNSVALVQEMKVAMPMFLNGEEETIGNGEGVVSAERVEER 419 (468)
Q Consensus 346 ~~~~~ith---gG~-~s~~eal~~GvP~v~~P~~~--DQ~~na~~~~~~~g~g~~~~~~~~~~~~~~~~~~~~~~~l~~a 419 (468)
++ ++.- -|. .+.+||+++|+|+|+....+ |.-.+...-.+. |.|+.++. -+.+++.++
T Consensus 372 Dv--~l~pS~~E~~gl~~lEAma~G~pvI~~~~gg~~e~v~~~~~~~~~-~~G~~~~~-------------~~~~~l~~~ 435 (476)
T cd03791 372 DF--FLMPSRFEPCGLTQMYAMRYGTVPIVRATGGLADTVIDYNEDTGE-GTGFVFEG-------------YNADALLAA 435 (476)
T ss_pred CE--EECCCCCCCCcHHHHHHhhCCCCCEECcCCCccceEeCCcCCCCC-CCeEEeCC-------------CCHHHHHHH
Confidence 76 5532 122 47899999999999876543 211111100012 57888874 478899999
Q ss_pred HHHHhc
Q 044031 420 VRELMM 425 (468)
Q Consensus 420 v~~~l~ 425 (468)
+.++++
T Consensus 436 i~~~l~ 441 (476)
T cd03791 436 LRRALA 441 (476)
T ss_pred HHHHHH
Confidence 999885
No 126
>TIGR02095 glgA glycogen/starch synthases, ADP-glucose type. This family consists of glycogen (or starch) synthases that use ADP-glucose (EC 2.4.1.21), rather than UDP-glucose (EC 2.4.1.11) as in animals, as the glucose donor. This enzyme is found in bacteria and plants. Whether the name given is glycogen synthase or starch synthase depends on context, and therefore on substrate.
Probab=95.11 E-value=0.32 Score=49.62 Aligned_cols=133 Identities=10% Similarity=0.004 Sum_probs=72.5
Q ss_pred eEEeccCCCcC-CCHHHHHHHHHHHHhCCCcEEEEEeCCCCccccCCChhHHhhc--cCCCeEecCCCCHH---hhhCcc
Q 044031 272 VVFLCFGSRGT-FSAPQLKEIAIGLERSNQRFLWVVRNPSNAAEAELPEGFLERT--KERGLVVKSWAPQS---TILGHE 345 (468)
Q Consensus 272 ~v~vs~GS~~~-~~~~~~~~~~~al~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~--~~~~~~v~~~~pq~---~il~~~ 345 (468)
++++..|.+.. ...+.+.+.+..+.+.+.+++++ |... ....+.+.+.. .+.++.+....++. .+++.+
T Consensus 292 ~~i~~vGrl~~~Kg~~~li~a~~~l~~~~~~lvi~-G~g~----~~~~~~l~~~~~~~~~~v~~~~~~~~~~~~~~~~~a 366 (473)
T TIGR02095 292 PLFGVISRLTQQKGVDLLLAALPELLELGGQLVVL-GTGD----PELEEALRELAERYPGNVRVIIGYDEALAHLIYAGA 366 (473)
T ss_pred CEEEEEecCccccChHHHHHHHHHHHHcCcEEEEE-CCCC----HHHHHHHHHHHHHCCCcEEEEEcCCHHHHHHHHHhC
Confidence 56666788753 23344444444454456676654 4321 00111121111 23445554444543 366777
Q ss_pred CcceEEec---CCc-chHHHHHHhCCcEEeccccc--chhhHHHHHHhhcceeeeeccCCcccccCCCCccccHHHHHHH
Q 044031 346 SVGGFVTH---CGW-SSVVEAVTYGVPMIAWPLYA--EQFLNSVALVQEMKVAMPMFLNGEEETIGNGEGVVSAERVEER 419 (468)
Q Consensus 346 ~~~~~ith---gG~-~s~~eal~~GvP~v~~P~~~--DQ~~na~~~~~~~g~g~~~~~~~~~~~~~~~~~~~~~~~l~~a 419 (468)
++ ++.= -|. .+.+||+++|+|.|+-...+ |.-.+...-.+. +.|+.+.. -+.+++.++
T Consensus 367 Dv--~l~pS~~E~~gl~~lEAma~G~pvI~s~~gg~~e~v~~~~~~~~~-~~G~l~~~-------------~d~~~la~~ 430 (473)
T TIGR02095 367 DF--ILMPSRFEPCGLTQLYAMRYGTVPIVRRTGGLADTVVDGDPEAES-GTGFLFEE-------------YDPGALLAA 430 (473)
T ss_pred CE--EEeCCCcCCcHHHHHHHHHCCCCeEEccCCCccceEecCCCCCCC-CceEEeCC-------------CCHHHHHHH
Confidence 77 5532 233 37899999999999876543 211111000111 67877764 478899999
Q ss_pred HHHHhc
Q 044031 420 VRELMM 425 (468)
Q Consensus 420 v~~~l~ 425 (468)
|.+++.
T Consensus 431 i~~~l~ 436 (473)
T TIGR02095 431 LSRALR 436 (473)
T ss_pred HHHHHH
Confidence 999886
No 127
>COG1817 Uncharacterized protein conserved in archaea [Function unknown]
Probab=94.98 E-value=3.2 Score=38.86 Aligned_cols=110 Identities=9% Similarity=0.008 Sum_probs=70.7
Q ss_pred cCCCccCHHHHHHHHHHHHhCCCCcEEEEEeCCCCCCchhhhhhhhccccCCCCCeeEEEcCCCCCCCCCCChhHHHHHH
Q 044031 9 PGPAFHHMISMVELGKLILQHRSDVSITILVPSMPLEESKTCSYINSISHRLNPIISFYYLPAIQMPSETLSRADIAIES 88 (468)
Q Consensus 9 ~~~~~GHv~P~l~LA~~L~~~G~~h~Vt~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~i~~~~lp~~~~~~~~~~~~~ 88 (468)
=.+..-|+.-+-.|-.+|.++| |+|.+.+-+...-...++.+ ||.+..+... +.......+...
T Consensus 6 DI~n~~hvhfFk~lI~elekkG--~ev~iT~rd~~~v~~LLd~y----------gf~~~~Igk~----g~~tl~~Kl~~~ 69 (346)
T COG1817 6 DIGNPPHVHFFKNLIWELEKKG--HEVLITCRDFGVVTELLDLY----------GFPYKSIGKH----GGVTLKEKLLES 69 (346)
T ss_pred EcCCcchhhHHHHHHHHHHhCC--eEEEEEEeecCcHHHHHHHh----------CCCeEeeccc----CCccHHHHHHHH
Confidence 3455668888999999999999 99988865554322222222 6777666543 111222112222
Q ss_pred HHHhhHHHHHHHHhhhcCCCccEEEe---cCcHHHhhhCCCCeEEEecchhHHH
Q 044031 89 IKLNSSNVFQALENISLTSKILSFII---TSTTSFSYHPNIPTYTYFNSCASTL 139 (468)
Q Consensus 89 ~~~~~~~l~~ll~~~~~~~~pD~vI~---~~~~~vA~~lgIP~i~~~~~~~~~~ 139 (468)
..+ ...+.+++.++ +||+.+. +.+..+|--+|+|.+.+.-...+..
T Consensus 70 ~eR-~~~L~ki~~~~----kpdv~i~~~s~~l~rvafgLg~psIi~~D~ehA~~ 118 (346)
T COG1817 70 AER-VYKLSKIIAEF----KPDVAIGKHSPELPRVAFGLGIPSIIFVDNEHAEA 118 (346)
T ss_pred HHH-HHHHHHHHhhc----CCceEeecCCcchhhHHhhcCCceEEecCChhHHH
Confidence 222 22455666666 9999999 6677788899999999877665543
No 128
>PRK15490 Vi polysaccharide biosynthesis protein TviE; Provisional
Probab=94.51 E-value=0.97 Score=46.30 Aligned_cols=64 Identities=17% Similarity=0.159 Sum_probs=43.7
Q ss_pred CCCeEecCCCCHH-hhhCccCcceEEec---CC-cchHHHHHHhCCcEEecccccchhhHHHHHHhhcceeeeecc
Q 044031 327 ERGLVVKSWAPQS-TILGHESVGGFVTH---CG-WSSVVEAVTYGVPMIAWPLYAEQFLNSVALVQEMKVAMPMFL 397 (468)
Q Consensus 327 ~~~~~v~~~~pq~-~il~~~~~~~~ith---gG-~~s~~eal~~GvP~v~~P~~~DQ~~na~~~~~~~g~g~~~~~ 397 (468)
.+++.+.+|..+. .++..+++ ||.. -| .+++.||+++|+|+|+.... -+...+.+. ..|..++.
T Consensus 454 ~d~V~FlG~~~Dv~~~LaaADV--fVlPS~~EGfp~vlLEAMA~GlPVVATdvG----G~~EiV~dG-~nG~LVp~ 522 (578)
T PRK15490 454 LERILFVGASRDVGYWLQKMNV--FILFSRYEGLPNVLIEAQMVGVPVISTPAG----GSAECFIEG-VSGFILDD 522 (578)
T ss_pred CCcEEECCChhhHHHHHHhCCE--EEEcccccCccHHHHHHHHhCCCEEEeCCC----CcHHHcccC-CcEEEECC
Confidence 3567777876432 45777777 7752 34 56999999999999987653 344555433 67887763
No 129
>PHA01630 putative group 1 glycosyl transferase
Probab=94.00 E-value=1.2 Score=43.01 Aligned_cols=43 Identities=14% Similarity=0.123 Sum_probs=28.6
Q ss_pred CCCCHHh---hhCccCcceEEecC-C-cchHHHHHHhCCcEEeccccc
Q 044031 334 SWAPQST---ILGHESVGGFVTHC-G-WSSVVEAVTYGVPMIAWPLYA 376 (468)
Q Consensus 334 ~~~pq~~---il~~~~~~~~ithg-G-~~s~~eal~~GvP~v~~P~~~ 376 (468)
.++|+.+ ++..+++-++-++. | ..++.||+++|+|+|+.-..+
T Consensus 196 ~~v~~~~l~~~y~~aDv~v~pS~~E~fgl~~lEAMA~G~PVIas~~gg 243 (331)
T PHA01630 196 TPLPDDDIYSLFAGCDILFYPVRGGAFEIPVIEALALGLDVVVTEKGA 243 (331)
T ss_pred ccCCHHHHHHHHHhCCEEEECCccccCChHHHHHHHcCCCEEEeCCCC
Confidence 3466554 57777772222332 2 558999999999999976543
No 130
>PF06258 Mito_fiss_Elm1: Mitochondrial fission ELM1; InterPro: IPR009367 This family consists of several hypothetical eukaryotic and prokaryotic proteins. The function of this family is unknown.
Probab=93.79 E-value=4.6 Score=38.50 Aligned_cols=40 Identities=30% Similarity=0.285 Sum_probs=33.4
Q ss_pred CCHHhhhCccCcceEEecCCcchHHHHHHhCCcEEeccccc
Q 044031 336 APQSTILGHESVGGFVTHCGWSSVVEAVTYGVPMIAWPLYA 376 (468)
Q Consensus 336 ~pq~~il~~~~~~~~ithgG~~s~~eal~~GvP~v~~P~~~ 376 (468)
=|+...|+.++. +|||-=-.+.+.||++.|+|+.++|...
T Consensus 220 nPy~~~La~ad~-i~VT~DSvSMvsEA~~tG~pV~v~~l~~ 259 (311)
T PF06258_consen 220 NPYLGFLAAADA-IVVTEDSVSMVSEAAATGKPVYVLPLPG 259 (311)
T ss_pred CcHHHHHHhCCE-EEEcCccHHHHHHHHHcCCCEEEecCCC
Confidence 367888988887 5666666888999999999999999876
No 131
>PF13524 Glyco_trans_1_2: Glycosyl transferases group 1
Probab=93.25 E-value=0.54 Score=35.63 Aligned_cols=66 Identities=15% Similarity=0.185 Sum_probs=43.1
Q ss_pred cCCcchHHHHHHhCCcEEecccccchhhHHHHHHhhcceeeeeccCCcccccCCCCccccHHHHHHHHHHHhcCch-hHH
Q 044031 353 HCGWSSVVEAVTYGVPMIAWPLYAEQFLNSVALVQEMKVAMPMFLNGEEETIGNGEGVVSAERVEERVRELMMGSE-GKA 431 (468)
Q Consensus 353 hgG~~s~~eal~~GvP~v~~P~~~DQ~~na~~~~~~~g~g~~~~~~~~~~~~~~~~~~~~~~~l~~av~~~l~~~~-~~~ 431 (468)
++-..-+.|++++|+|+|+-.. ......+ +. |.....- -+.+++.++|..+++|++ .++
T Consensus 9 ~~~~~r~~E~~a~G~~vi~~~~----~~~~~~~-~~-~~~~~~~--------------~~~~el~~~i~~ll~~~~~~~~ 68 (92)
T PF13524_consen 9 DGPNMRIFEAMACGTPVISDDS----PGLREIF-ED-GEHIITY--------------NDPEELAEKIEYLLENPEERRR 68 (92)
T ss_pred CCCchHHHHHHHCCCeEEECCh----HHHHHHc-CC-CCeEEEE--------------CCHHHHHHHHHHHHCCHHHHHH
Confidence 4445689999999999999864 3333333 22 4222221 278899999999999985 444
Q ss_pred HHHHHHH
Q 044031 432 LRERSLE 438 (468)
Q Consensus 432 ~~~~a~~ 438 (468)
+.+++++
T Consensus 69 ia~~a~~ 75 (92)
T PF13524_consen 69 IAKNARE 75 (92)
T ss_pred HHHHHHH
Confidence 4444443
No 132
>PF13477 Glyco_trans_4_2: Glycosyl transferase 4-like
Probab=93.14 E-value=0.96 Score=37.13 Aligned_cols=97 Identities=16% Similarity=0.105 Sum_probs=58.5
Q ss_pred eEEEecCCCccCHHHHHHHHHHHHhCCCCcEEEEEeCCCCCCchhhhhhhhccccCCCCCeeEEEcCCCCCCCCCCChhH
Q 044031 4 TIALYPGPAFHHMISMVELGKLILQHRSDVSITILVPSMPLEESKTCSYINSISHRLNPIISFYYLPAIQMPSETLSRAD 83 (468)
Q Consensus 4 ~Iv~~~~~~~GHv~P~l~LA~~L~~~G~~h~Vt~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~i~~~~lp~~~~~~~~ 83 (468)
+|++++.....| ...+++.|.++| |+|++++....... . . ...++.+..++.. .. ..
T Consensus 1 KIl~i~~~~~~~---~~~~~~~L~~~g--~~V~ii~~~~~~~~-----~-~-----~~~~i~~~~~~~~---~k--~~-- 57 (139)
T PF13477_consen 1 KILLIGNTPSTF---IYNLAKELKKRG--YDVHIITPRNDYEK-----Y-E-----IIEGIKVIRLPSP---RK--SP-- 57 (139)
T ss_pred CEEEEecCcHHH---HHHHHHHHHHCC--CEEEEEEcCCCchh-----h-h-----HhCCeEEEEecCC---CC--cc--
Confidence 377777766666 457799999999 99999987443211 0 0 2347787777533 11 11
Q ss_pred HHHHHHHHhhHHHHHHHHhhhcCCCccEEEe--cC--cH---HHhhhCC-CCeEEE
Q 044031 84 IAIESIKLNSSNVFQALENISLTSKILSFII--TS--TT---SFSYHPN-IPTYTY 131 (468)
Q Consensus 84 ~~~~~~~~~~~~l~~ll~~~~~~~~pD~vI~--~~--~~---~vA~~lg-IP~i~~ 131 (468)
...+. .. .+..++++. +||+|.+ .. +. .++...| +|.+..
T Consensus 58 --~~~~~-~~-~l~k~ik~~----~~DvIh~h~~~~~~~~~~l~~~~~~~~~~i~~ 105 (139)
T PF13477_consen 58 --LNYIK-YF-RLRKIIKKE----KPDVIHCHTPSPYGLFAMLAKKLLKNKKVIYT 105 (139)
T ss_pred --HHHHH-HH-HHHHHhccC----CCCEEEEecCChHHHHHHHHHHHcCCCCEEEE
Confidence 11122 22 556666666 9999988 22 11 2345578 888753
No 133
>PF06722 DUF1205: Protein of unknown function (DUF1205); InterPro: IPR010610 This entry represents a conserved region of unknown function within bacterial glycosyl transferases. Many proteins containing this domain are members of the glycosyl transferase family 28 IPR004276 from INTERPRO.; PDB: 3OTH_A 3OTG_A 3OTI_A 3D0R_A 3D0Q_B 2P6P_A 3UYK_A 3UYL_B 3TSA_B 2YJN_A.
Probab=93.07 E-value=0.097 Score=40.25 Aligned_cols=53 Identities=15% Similarity=0.275 Sum_probs=43.5
Q ss_pred cchhHHhhcCCCCCceEEeccCCCcCC---CH--HHHHHHHHHHHhCCCcEEEEEeCC
Q 044031 257 SSDCLTWLDSQPSGSVVFLCFGSRGTF---SA--PQLKEIAIGLERSNQRFLWVVRNP 309 (468)
Q Consensus 257 ~~~l~~~l~~~~~~~~v~vs~GS~~~~---~~--~~~~~~~~al~~~~~~~l~~~~~~ 309 (468)
+..+..|+.+.+.++-|.||+||.... .. ..+..++++++..+..+|..+...
T Consensus 27 ~~~~P~Wl~~~~~RpRVcvT~G~~~~~~~g~~~~~~l~~ll~ala~ldvEvV~a~~~~ 84 (97)
T PF06722_consen 27 PAVVPDWLLEPPGRPRVCVTLGTSVRMFFGPGGVPLLRRLLEALAGLDVEVVVALPAA 84 (97)
T ss_dssp SEEEEGGGSSSTSSEEEEEEETHHHCHHHSCHHHCHHHHHHHHHHTSSSEEEEEETTC
T ss_pred CCCCCcccccCCCCCEEEEEcCCCccccccccchHHHHHHHHHHhhCCcEEEEECCHH
Confidence 455667998888899999999998633 22 468889999999999999988865
No 134
>PF13579 Glyco_trans_4_4: Glycosyl transferase 4-like domain; PDB: 3C4Q_B 3C4V_A 3C48_B 1Z2T_A.
Probab=92.87 E-value=0.16 Score=42.53 Aligned_cols=93 Identities=12% Similarity=0.090 Sum_probs=44.1
Q ss_pred HHHHHHHHHHhCCCCcEEEEEeCCCCCCchhhhhhhhccccCCCCCeeEEEcCCCCCCCCCCChhHHHHHHHHHhhHHHH
Q 044031 18 SMVELGKLILQHRSDVSITILVPSMPLEESKTCSYINSISHRLNPIISFYYLPAIQMPSETLSRADIAIESIKLNSSNVF 97 (468)
Q Consensus 18 P~l~LA~~L~~~G~~h~Vt~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~i~~~~lp~~~~~~~~~~~~~~~~~~~~l~ 97 (468)
-+..|++.|.++| |+|++++......... . ...++.+..++....+ ..... .. ....+.
T Consensus 6 ~~~~l~~~L~~~G--~~V~v~~~~~~~~~~~-------~---~~~~~~~~~~~~~~~~---~~~~~--~~----~~~~~~ 64 (160)
T PF13579_consen 6 YVRELARALAARG--HEVTVVTPQPDPEDDE-------E---EEDGVRVHRLPLPRRP---WPLRL--LR----FLRRLR 64 (160)
T ss_dssp HHHHHHHHHHHTT---EEEEEEE---GGG-S-------E---EETTEEEEEE--S-SS---SGGGH--CC----HHHHHH
T ss_pred HHHHHHHHHHHCC--CEEEEEecCCCCcccc-------c---ccCCceEEeccCCccc---hhhhh--HH----HHHHHH
Confidence 4678999999999 9999998655443110 1 2336777777644221 11110 00 112333
Q ss_pred HHHHhhhcCCCccEEEe-----cCcHHHhh-hCCCCeEEEec
Q 044031 98 QALENISLTSKILSFII-----TSTTSFSY-HPNIPTYTYFN 133 (468)
Q Consensus 98 ~ll~~~~~~~~pD~vI~-----~~~~~vA~-~lgIP~i~~~~ 133 (468)
.++ .....++|+|.+ .+...+++ ..++|.+....
T Consensus 65 ~~l--~~~~~~~Dvv~~~~~~~~~~~~~~~~~~~~p~v~~~h 104 (160)
T PF13579_consen 65 RLL--AARRERPDVVHAHSPTAGLVAALARRRRGIPLVVTVH 104 (160)
T ss_dssp HHC--HHCT---SEEEEEHHHHHHHHHHHHHHHT--EEEE-S
T ss_pred HHH--hhhccCCeEEEecccchhHHHHHHHHccCCcEEEEEC
Confidence 334 112349999999 22333555 68999887543
No 135
>PLN02939 transferase, transferring glycosyl groups
Probab=91.62 E-value=2.8 Score=45.70 Aligned_cols=93 Identities=11% Similarity=0.136 Sum_probs=56.2
Q ss_pred CCeEecCCCCHH---hhhCccCcceEEec----CCcchHHHHHHhCCcEEeccccc--chhhH--HHHHHhhcceeeeec
Q 044031 328 RGLVVKSWAPQS---TILGHESVGGFVTH----CGWSSVVEAVTYGVPMIAWPLYA--EQFLN--SVALVQEMKVAMPMF 396 (468)
Q Consensus 328 ~~~~v~~~~pq~---~il~~~~~~~~ith----gG~~s~~eal~~GvP~v~~P~~~--DQ~~n--a~~~~~~~g~g~~~~ 396 (468)
.++.+..+.+.. .+++.+++ ||.- +--.+.+||+++|+|.|+....+ |.-.+ ...+.+.-+-|..+.
T Consensus 837 drV~FlG~~de~lah~IYAaADI--FLmPSr~EPfGLvqLEAMAyGtPPVVs~vGGL~DtV~d~d~e~i~~eg~NGfLf~ 914 (977)
T PLN02939 837 NNIRLILKYDEALSHSIYAASDM--FIIPSMFEPCGLTQMIAMRYGSVPIVRKTGGLNDSVFDFDDETIPVELRNGFTFL 914 (977)
T ss_pred CeEEEEeccCHHHHHHHHHhCCE--EEECCCccCCcHHHHHHHHCCCCEEEecCCCCcceeecCCccccccCCCceEEec
Confidence 457666777764 46777777 7742 11358999999999999876644 32211 111111125677776
Q ss_pred cCCcccccCCCCccccHHHHHHHHHHHhc----Cch-hHHHHHH
Q 044031 397 LNGEEETIGNGEGVVSAERVEERVRELMM----GSE-GKALRER 435 (468)
Q Consensus 397 ~~~~~~~~~~~~~~~~~~~l~~av~~~l~----~~~-~~~~~~~ 435 (468)
. -+.+.+.+++.+++. |++ +..|.++
T Consensus 915 ~-------------~D~eaLa~AL~rAL~~~~~dpe~~~~L~~~ 945 (977)
T PLN02939 915 T-------------PDEQGLNSALERAFNYYKRKPEVWKQLVQK 945 (977)
T ss_pred C-------------CCHHHHHHHHHHHHHHhccCHHHHHHHHHH
Confidence 3 477788888887764 553 3444443
No 136
>PLN02316 synthase/transferase
Probab=90.52 E-value=7.3 Score=43.27 Aligned_cols=114 Identities=6% Similarity=-0.071 Sum_probs=63.3
Q ss_pred CeEecCCCCHH---hhhCccCcceEEec----CCcchHHHHHHhCCcEEeccccc--chhhHHH------HHHhhcceee
Q 044031 329 GLVVKSWAPQS---TILGHESVGGFVTH----CGWSSVVEAVTYGVPMIAWPLYA--EQFLNSV------ALVQEMKVAM 393 (468)
Q Consensus 329 ~~~v~~~~pq~---~il~~~~~~~~ith----gG~~s~~eal~~GvP~v~~P~~~--DQ~~na~------~~~~~~g~g~ 393 (468)
.+.+....+.. .+++.+++ |+.- +=-.+.+||+++|+|.|+....+ |.-.... .....-+-|.
T Consensus 901 rV~f~g~~de~lah~iyaaADi--flmPS~~EP~GLvqLEAMa~GtppVvs~vGGL~DtV~d~d~~~~~~~~~g~~~tGf 978 (1036)
T PLN02316 901 RARLCLTYDEPLSHLIYAGADF--ILVPSIFEPCGLTQLTAMRYGSIPVVRKTGGLFDTVFDVDHDKERAQAQGLEPNGF 978 (1036)
T ss_pred eEEEEecCCHHHHHHHHHhCcE--EEeCCcccCccHHHHHHHHcCCCeEEEcCCCcHhhccccccccccccccccCCceE
Confidence 44443344443 46766776 7742 22358999999999999865543 3221110 0000014677
Q ss_pred eeccCCcccccCCCCccccHHHHHHHHHHHhcCchhHHHHHHHHHHHHHHHHhhcCCCCCChHHHHHHHHH
Q 044031 394 PMFLNGEEETIGNGEGVVSAERVEERVRELMMGSEGKALRERSLEMRMMAATAWNNNDGGSSFTAFSNLFD 464 (468)
Q Consensus 394 ~~~~~~~~~~~~~~~~~~~~~~l~~av~~~l~~~~~~~~~~~a~~l~~~~~~a~~~~~~g~~~~~~~~~~~ 464 (468)
.++. .+++.|..+|.+++.+ +.+....++...+++|. .+=|-....++..+
T Consensus 979 lf~~-------------~d~~aLa~AL~raL~~-----~~~~~~~~~~~~r~~m~--~dFSW~~~A~~Y~~ 1029 (1036)
T PLN02316 979 SFDG-------------ADAAGVDYALNRAISA-----WYDGRDWFNSLCKRVME--QDWSWNRPALDYME 1029 (1036)
T ss_pred EeCC-------------CCHHHHHHHHHHHHhh-----hhhhHHHHHHHHHHHHH--hhCCHHHHHHHHHH
Confidence 7763 5788999999999864 22333334555555555 44444444444433
No 137
>TIGR02201 heptsyl_trn_III lipopolysaccharide heptosyltransferase III, putative. This family consists of examples of the putative ADP-heptose:LPS heptosyltransferase III, an enzyme of LPS inner core region biosynthesis. LPS, composed of lipid A, a core region, and O antigen, is found in the outer membrane of Gram-negative bacteria. This enzyme may be less widely distributed than heptosyltransferases I and II.
Probab=90.33 E-value=18 Score=34.98 Aligned_cols=99 Identities=11% Similarity=0.194 Sum_probs=60.5
Q ss_pred CCceEEeccCCCc---CCCHHHHHHHHHHHHhCCCcEEEEEeCCCCccccCCChhHHhhccCCCeE-ecCC--CC-HHhh
Q 044031 269 SGSVVFLCFGSRG---TFSAPQLKEIAIGLERSNQRFLWVVRNPSNAAEAELPEGFLERTKERGLV-VKSW--AP-QSTI 341 (468)
Q Consensus 269 ~~~~v~vs~GS~~---~~~~~~~~~~~~al~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~-v~~~--~p-q~~i 341 (468)
.++.|.+..|+.. .++.+.+.++++.|...+.++++..+...+ +..+-+.+.+......++ +.+- +. -..+
T Consensus 180 ~~~~i~i~p~a~~~~K~Wp~e~~~~l~~~l~~~~~~ivl~g~p~~~--e~~~~~~i~~~~~~~~~~~l~g~~sL~el~al 257 (344)
T TIGR02201 180 GQNYIVIQPTSRWFFKCWDNDRFSALIDALHARGYEVVLTSGPDKD--ELAMVNEIAQGCQTPRVTSLAGKLTLPQLAAL 257 (344)
T ss_pred CCCEEEEeCCCCccccCCCHHHHHHHHHHHHhCCCeEEEecCCCHH--HHHHHHHHHhhCCCCcccccCCCCCHHHHHHH
Confidence 3457777777764 567788999999887777887765443200 000111222211111111 2222 22 3357
Q ss_pred hCccCcceEEecCCcchHHHHHHhCCcEEec
Q 044031 342 LGHESVGGFVTHCGWSSVVEAVTYGVPMIAW 372 (468)
Q Consensus 342 l~~~~~~~~ithgG~~s~~eal~~GvP~v~~ 372 (468)
+.++++ ||+. -.|-+.=|.+.|+|+|++
T Consensus 258 i~~a~l--~Vs~-DSGp~HlAaA~g~p~v~L 285 (344)
T TIGR02201 258 IDHARL--FIGV-DSVPMHMAAALGTPLVAL 285 (344)
T ss_pred HHhCCE--EEec-CCHHHHHHHHcCCCEEEE
Confidence 888888 9988 678889999999999987
No 138
>cd01635 Glycosyltransferase_GTB_type Glycosyltransferases catalyze the transfer of sugar moieties from activated donor molecules to specific acceptor molecules, forming glycosidic bonds. The acceptor molecule can be a lipid, a protein, a heterocyclic compound, or another carbohydrate residue. The structures of the formed glycoconjugates are extremely diverse, reflecting a wide range of biological functions. The members of this family share a common GTB topology, one of the two protein topologies observed for nucleotide-sugar-dependent glycosyltransferases. GTB proteins have distinct N- and C- terminal domains each containing a typical Rossmann fold. The two domains have high structural homology despite minimal sequence homology. The large cleft that separates the two domains includes the catalytic center and permits a high degree of flexibility.
Probab=89.25 E-value=1.3 Score=39.40 Aligned_cols=50 Identities=22% Similarity=0.197 Sum_probs=35.1
Q ss_pred CCCeEecCCCCH-H---hhhCccCcceEEecCC----cchHHHHHHhCCcEEecccccch
Q 044031 327 ERGLVVKSWAPQ-S---TILGHESVGGFVTHCG----WSSVVEAVTYGVPMIAWPLYAEQ 378 (468)
Q Consensus 327 ~~~~~v~~~~pq-~---~il~~~~~~~~ithgG----~~s~~eal~~GvP~v~~P~~~DQ 378 (468)
..++.+.+++++ + .++..+++ +|+-.. .+++.||+++|+|+|+-+..+.+
T Consensus 160 ~~~v~~~~~~~~~~~~~~~~~~~di--~l~~~~~e~~~~~~~Eam~~g~pvi~s~~~~~~ 217 (229)
T cd01635 160 LDRVIFLGGLDPEELLALLLAAADV--FVLPSLREGFGLVVLEAMACGLPVIATDVGGPP 217 (229)
T ss_pred cccEEEeCCCCcHHHHHHHhhcCCE--EEecccccCcChHHHHHHhCCCCEEEcCCCCcc
Confidence 457777777632 2 23333666 777665 78999999999999998876543
No 139
>TIGR02400 trehalose_OtsA alpha,alpha-trehalose-phosphate synthase [UDP-forming]. This enzyme catalyzes the key, penultimate step in biosynthesis of trehalose, a compatible solute made as an osmoprotectant in some species in all three domains of life. The gene symbol OtsA stands for osmotically regulated trehalose synthesis A. Trehalose helps protect against both osmotic and thermal stresses, and is made from two glucose subunits. This model excludes glucosylglycerol-phosphate synthase, an enzyme of an analogous osmoprotectant system in many cyanobacterial strains. This model does not identify archaeal examples, as they are more divergent than glucosylglycerol-phosphate synthase. Sequences that score in the gray zone between the trusted and noise cutoffs include a number of yeast multidomain proteins in which the N-terminal domain may be functionally equivalent to this family. The gray zone also includes the OtsA of Cornyebacterium glutamicum (and related species), shown to be responsib
Probab=89.15 E-value=5.2 Score=40.52 Aligned_cols=105 Identities=10% Similarity=0.020 Sum_probs=64.7
Q ss_pred ecCCCCHHhh---hCccCcceEEe---cCCcc-hHHHHHHhCCc----EEecccccchhhHHHHHHhhcceeeeeccCCc
Q 044031 332 VKSWAPQSTI---LGHESVGGFVT---HCGWS-SVVEAVTYGVP----MIAWPLYAEQFLNSVALVQEMKVAMPMFLNGE 400 (468)
Q Consensus 332 v~~~~pq~~i---l~~~~~~~~it---hgG~~-s~~eal~~GvP----~v~~P~~~DQ~~na~~~~~~~g~g~~~~~~~~ 400 (468)
+...+++.++ +..+++ |+. +=|.| ++.||+++|+| +|+--..+-. ..+ +-|+.+++
T Consensus 340 l~~~~~~~el~aly~aaDv--~vv~S~~EG~~Lv~lEamA~g~P~~g~vVlS~~~G~~----~~l----~~gllVnP--- 406 (456)
T TIGR02400 340 LNRSYDREELMALYRAADV--GLVTPLRDGMNLVAKEYVAAQDPKDGVLILSEFAGAA----QEL----NGALLVNP--- 406 (456)
T ss_pred EcCCCCHHHHHHHHHhCcE--EEECccccccCccHHHHHHhcCCCCceEEEeCCCCCh----HHh----CCcEEECC---
Confidence 3356676654 555555 664 34644 78899999999 6665444321 212 34777774
Q ss_pred ccccCCCCccccHHHHHHHHHHHhcCchhHHHHHHHHHHHHHHHHhhcCCCCCChHHHHHHHHHHhh
Q 044031 401 EETIGNGEGVVSAERVEERVRELMMGSEGKALRERSLEMRMMAATAWNNNDGGSSFTAFSNLFDLWQ 467 (468)
Q Consensus 401 ~~~~~~~~~~~~~~~l~~av~~~l~~~~~~~~~~~a~~l~~~~~~a~~~~~~g~~~~~~~~~~~~~~ 467 (468)
.+.+.++++|.++|+.+. ++-+++.+++.+.+.+ -+...=.++|+++|.
T Consensus 407 ----------~d~~~lA~aI~~aL~~~~-~er~~r~~~~~~~v~~-------~~~~~W~~~~l~~l~ 455 (456)
T TIGR02400 407 ----------YDIDGMADAIARALTMPL-EEREERHRAMMDKLRK-------NDVQRWREDFLSDLN 455 (456)
T ss_pred ----------CCHHHHHHHHHHHHcCCH-HHHHHHHHHHHHHHhh-------CCHHHHHHHHHHHhh
Confidence 578899999999998652 1334444444443322 455666777777764
No 140
>PRK14099 glycogen synthase; Provisional
Probab=89.00 E-value=3.6 Score=42.04 Aligned_cols=77 Identities=10% Similarity=0.173 Sum_probs=44.4
Q ss_pred cCcceEEe---cCCc-chHHHHHHhCCcEEeccccc--chhhHHHHHHhh--cceeeeeccCCcccccCCCCccccHHHH
Q 044031 345 ESVGGFVT---HCGW-SSVVEAVTYGVPMIAWPLYA--EQFLNSVALVQE--MKVAMPMFLNGEEETIGNGEGVVSAERV 416 (468)
Q Consensus 345 ~~~~~~it---hgG~-~s~~eal~~GvP~v~~P~~~--DQ~~na~~~~~~--~g~g~~~~~~~~~~~~~~~~~~~~~~~l 416 (468)
+++ |+. +=|. .+.+||+++|+|.|+.-..+ |--.......+. -+.|+.++. -+.+++
T Consensus 370 aDi--fv~PS~~E~fGl~~lEAma~G~ppVvs~~GGl~d~V~~~~~~~~~~~~~~G~l~~~-------------~d~~~L 434 (485)
T PRK14099 370 ADA--LLVPSRFEPCGLTQLCALRYGAVPVVARVGGLADTVVDANEMAIATGVATGVQFSP-------------VTADAL 434 (485)
T ss_pred CCE--EEECCccCCCcHHHHHHHHCCCCcEEeCCCCccceeecccccccccCCCceEEeCC-------------CCHHHH
Confidence 454 664 2333 47789999997767665432 322111100000 046777774 478899
Q ss_pred HHHHHH---HhcCch-hHHHHHHH
Q 044031 417 EERVRE---LMMGSE-GKALRERS 436 (468)
Q Consensus 417 ~~av~~---~l~~~~-~~~~~~~a 436 (468)
.+++.+ +++|++ ++++.+++
T Consensus 435 a~ai~~a~~l~~d~~~~~~l~~~~ 458 (485)
T PRK14099 435 AAALRKTAALFADPVAWRRLQRNG 458 (485)
T ss_pred HHHHHHHHHHhcCHHHHHHHHHHh
Confidence 999987 666764 44555554
No 141
>COG4370 Uncharacterized protein conserved in bacteria [Function unknown]
Probab=87.99 E-value=1.3 Score=41.00 Aligned_cols=89 Identities=19% Similarity=0.218 Sum_probs=56.9
Q ss_pred CeEecCCCCHHhhhCccCcceEEecCCcchHHHHHHhCCcEEecccccchhh--HHHHHHhhcceeeeeccCCcccccCC
Q 044031 329 GLVVKSWAPQSTILGHESVGGFVTHCGWSSVVEAVTYGVPMIAWPLYAEQFL--NSVALVQEMKVAMPMFLNGEEETIGN 406 (468)
Q Consensus 329 ~~~v~~~~pq~~il~~~~~~~~ithgG~~s~~eal~~GvP~v~~P~~~DQ~~--na~~~~~~~g~g~~~~~~~~~~~~~~ 406 (468)
.-++..|-...++|.|+++ .|--.| ..+-.++-.|||+|.+|-.+-|+. .|.+=..-+|+.+.+-.
T Consensus 296 c~l~lsqqsfadiLH~ada--algmAG-TAtEQavGLGkPvi~fPg~GPQy~pgFA~rQ~rLLG~sltlv~--------- 363 (412)
T COG4370 296 CSLWLSQQSFADILHAADA--ALGMAG-TATEQAVGLGKPVIGFPGQGPQYNPGFAERQQRLLGASLTLVR--------- 363 (412)
T ss_pred eEEEEeHHHHHHHHHHHHH--HHHhcc-chHHHhhccCCceeecCCCCCCcChHHHHHHHHHhcceeeecC---------
Confidence 3445556666677777776 443333 223446789999999999999976 55555445688877763
Q ss_pred CCccccHHHHHHHHHHHhcCch-hHHHH
Q 044031 407 GEGVVSAERVEERVRELMMGSE-GKALR 433 (468)
Q Consensus 407 ~~~~~~~~~l~~av~~~l~~~~-~~~~~ 433 (468)
-.+..-..++++++.|++ ....|
T Consensus 364 ----~~aq~a~~~~q~ll~dp~r~~air 387 (412)
T COG4370 364 ----PEAQAAAQAVQELLGDPQRLTAIR 387 (412)
T ss_pred ----CchhhHHHHHHHHhcChHHHHHHH
Confidence 233344445556999995 34444
No 142
>PRK10916 ADP-heptose:LPS heptosyltransferase II; Provisional
Probab=87.98 E-value=27 Score=33.86 Aligned_cols=38 Identities=13% Similarity=0.163 Sum_probs=35.1
Q ss_pred eEEEecCCCccCHHHHHHHHHHHHhCCCCcEEEEEeCC
Q 044031 4 TIALYPGPAFHHMISMVELGKLILQHRSDVSITILVPS 41 (468)
Q Consensus 4 ~Iv~~~~~~~GHv~P~l~LA~~L~~~G~~h~Vt~~~~~ 41 (468)
+|+++-..+-|++.=.+.+.+.|+++-|+.+|++++..
T Consensus 2 rILii~~~~iGD~il~tP~l~~Lk~~~P~a~I~~l~~~ 39 (348)
T PRK10916 2 KILVIGPSWVGDMMMSQSLYRTLKARYPQAIIDVMAPA 39 (348)
T ss_pred cEEEEccCcccHHHhHHHHHHHHHHHCCCCeEEEEech
Confidence 49999999999999999999999999888999999754
No 143
>PF12000 Glyco_trans_4_3: Gkycosyl transferase family 4 group; InterPro: IPR022623 This presumed domain is functionally uncharacterised and found in bacteria. This region is about 170 amino acids in length and is found N-terminal to PF00534 from PFAM. There is a single completely conserved residue G that may be functionally important.
Probab=86.79 E-value=10 Score=32.55 Aligned_cols=26 Identities=12% Similarity=-0.073 Sum_probs=19.3
Q ss_pred CCCccEEEe--cCcHH--HhhhC-CCCeEEE
Q 044031 106 TSKILSFII--TSTTS--FSYHP-NIPTYTY 131 (468)
Q Consensus 106 ~~~pD~vI~--~~~~~--vA~~l-gIP~i~~ 131 (468)
...||+||+ .|+-. +-+.+ ++|.+.+
T Consensus 64 Gf~PDvI~~H~GWGe~Lflkdv~P~a~li~Y 94 (171)
T PF12000_consen 64 GFVPDVIIAHPGWGETLFLKDVFPDAPLIGY 94 (171)
T ss_pred CCCCCEEEEcCCcchhhhHHHhCCCCcEEEE
Confidence 479999999 77665 45556 8887765
No 144
>PF08660 Alg14: Oligosaccharide biosynthesis protein Alg14 like; InterPro: IPR013969 Alg14 is involved dolichol-linked oligosaccharide biosynthesis and anchors the catalytic subunit Alg13 to the ER membrane [].
Probab=86.75 E-value=5.8 Score=34.08 Aligned_cols=39 Identities=18% Similarity=0.022 Sum_probs=26.0
Q ss_pred EecCCCccCHHHHHHHHHHHHhCCCCcEEEEEeCCCCCC
Q 044031 7 LYPGPAFHHMISMVELGKLILQHRSDVSITILVPSMPLE 45 (468)
Q Consensus 7 ~~~~~~~GHv~P~l~LA~~L~~~G~~h~Vt~~~~~~~~~ 45 (468)
++-.++.||..=|+.|.+.+.....+++..+++......
T Consensus 2 l~v~gsGGHt~eml~L~~~~~~~~~~~~~~ivt~~d~~S 40 (170)
T PF08660_consen 2 LVVLGSGGHTAEMLRLLKALDNDRYQPRTYIVTEGDKQS 40 (170)
T ss_pred EEEEcCcHHHHHHHHHHHHhhhhcCCCcEEEEEcCCccc
Confidence 344589999999999999992222236666665544433
No 145
>TIGR02919 accessory Sec system glycosyltransferase GtfB. Members of this protein family are found only in Gram-positive bacteria of the Firmicutes lineage, including several species of Staphylococcus, Streptococcus, and Lactobacillus.
Probab=86.57 E-value=13 Score=37.48 Aligned_cols=126 Identities=9% Similarity=0.113 Sum_probs=75.9
Q ss_pred CCceEEeccCCCcCCCHHHHHHHHHHHHhC-CCcEEEEEeCCCCccccCCChhHHhhccCCCeE-ecCCCC--HHhhhCc
Q 044031 269 SGSVVFLCFGSRGTFSAPQLKEIAIGLERS-NQRFLWVVRNPSNAAEAELPEGFLERTKERGLV-VKSWAP--QSTILGH 344 (468)
Q Consensus 269 ~~~~v~vs~GS~~~~~~~~~~~~~~al~~~-~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~-v~~~~p--q~~il~~ 344 (468)
++.+++++ ...++..+....+.. +..|=...+.. ....+.......|++ ...+.+ -.+++..
T Consensus 282 ~~~~l~~t-------~s~~I~~i~~Lv~~lPd~~f~Iga~te-------~s~kL~~L~~y~nvvly~~~~~~~l~~ly~~ 347 (438)
T TIGR02919 282 RKQALILT-------NSDQIEHLEEIVQALPDYHFHIAALTE-------MSSKLMSLDKYDNVKLYPNITTQKIQELYQT 347 (438)
T ss_pred cccEEEEC-------CHHHHHHHHHHHHhCCCcEEEEEecCc-------ccHHHHHHHhcCCcEEECCcChHHHHHHHHh
Confidence 34488776 244455555555553 44443222221 122332221224554 445566 3478999
Q ss_pred cCcceEEecCC--cchHHHHHHhCCcEEecccccchhhHHHHHHhhcceeeeeccCCcccccCCCCccccHHHHHHHHHH
Q 044031 345 ESVGGFVTHCG--WSSVVEAVTYGVPMIAWPLYAEQFLNSVALVQEMKVAMPMFLNGEEETIGNGEGVVSAERVEERVRE 422 (468)
Q Consensus 345 ~~~~~~ithgG--~~s~~eal~~GvP~v~~P~~~DQ~~na~~~~~~~g~g~~~~~~~~~~~~~~~~~~~~~~~l~~av~~ 422 (468)
|++-+-|+|+. ..++.||+.+|+|+++.=.... +...+. . |..... -+.+++.++|.+
T Consensus 348 ~dlyLdin~~e~~~~al~eA~~~G~pI~afd~t~~---~~~~i~-~---g~l~~~-------------~~~~~m~~~i~~ 407 (438)
T TIGR02919 348 CDIYLDINHGNEILNAVRRAFEYNLLILGFEETAH---NRDFIA-S---ENIFEH-------------NEVDQLISKLKD 407 (438)
T ss_pred ccEEEEccccccHHHHHHHHHHcCCcEEEEecccC---Cccccc-C---CceecC-------------CCHHHHHHHHHH
Confidence 99988899977 6699999999999998754322 112222 1 444442 367899999999
Q ss_pred HhcCch
Q 044031 423 LMMGSE 428 (468)
Q Consensus 423 ~l~~~~ 428 (468)
+|.+++
T Consensus 408 lL~d~~ 413 (438)
T TIGR02919 408 LLNDPN 413 (438)
T ss_pred HhcCHH
Confidence 999884
No 146
>TIGR02193 heptsyl_trn_I lipopolysaccharide heptosyltransferase I. This family consists of examples of ADP-heptose:LPS heptosyltransferase I, an enzyme of LPS inner core region biosynthesis. LPS, composed of lipid A, a core region, and O antigen, is found in the outer membrane of Gram-negative bacteria.
Probab=85.85 E-value=6.7 Score=37.53 Aligned_cols=142 Identities=15% Similarity=0.116 Sum_probs=76.4
Q ss_pred hhcCCCCCceEEeccCCCc---CCCHHHHHHHHHHHHhCCCcEEEEEeCCCCccccCCChhHHhhccCCCeEecCC--CC
Q 044031 263 WLDSQPSGSVVFLCFGSRG---TFSAPQLKEIAIGLERSNQRFLWVVRNPSNAAEAELPEGFLERTKERGLVVKSW--AP 337 (468)
Q Consensus 263 ~l~~~~~~~~v~vs~GS~~---~~~~~~~~~~~~al~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~--~p 337 (468)
++....+++.|.+..|+.. ..+.+.+.++++.|...+.++++..+.+. +...-+.+.+..... .+.+- ++
T Consensus 172 ~~~~~~~~~~i~i~~gas~~~K~wp~e~~~~l~~~l~~~~~~~vl~~g~~~---e~~~~~~i~~~~~~~--~l~g~~sL~ 246 (319)
T TIGR02193 172 FLGHALPAPYAVLLHATSRDDKTWPEERWRELARLLLARGLQIVLPWGNDA---EKQRAERIAEALPGA--VVLPKMSLA 246 (319)
T ss_pred hhhccCCCCEEEEEeCCCcccCCCCHHHHHHHHHHHHHCCCeEEEeCCCHH---HHHHHHHHHhhCCCC--eecCCCCHH
Confidence 4433223445655555432 66788899999999776788776655431 111111222211111 22232 23
Q ss_pred -HHhhhCccCcceEEecCCcchHHHHHHhCCcEEecccccchhhHHHHHHhhcceeeeeccCCcccccCCCCccccHHHH
Q 044031 338 -QSTILGHESVGGFVTHCGWSSVVEAVTYGVPMIAWPLYAEQFLNSVALVQEMKVAMPMFLNGEEETIGNGEGVVSAERV 416 (468)
Q Consensus 338 -q~~il~~~~~~~~ithgG~~s~~eal~~GvP~v~~P~~~DQ~~na~~~~~~~g~g~~~~~~~~~~~~~~~~~~~~~~~l 416 (468)
-..++.++++ +|+. -.|-+.=|.+.|+|+|++ + + +.+..+. .-+|-...+-. .......+.+++
T Consensus 247 el~ali~~a~l--~I~~-DSgp~HlAaa~g~P~i~l-f-g--~t~p~~~-~P~~~~~~~~~-------~~~~~~I~~~~V 311 (319)
T TIGR02193 247 EVAALLAGADA--VVGV-DTGLTHLAAALDKPTVTL-Y-G--ATDPGRT-GGYGKPNVALL-------GESGANPTPDEV 311 (319)
T ss_pred HHHHHHHcCCE--EEeC-CChHHHHHHHcCCCEEEE-E-C--CCCHhhc-ccCCCCceEEc-------cCccCCCCHHHH
Confidence 3357778887 8875 457777788999999987 2 2 1122221 11222211111 011222899999
Q ss_pred HHHHHHHh
Q 044031 417 EERVRELM 424 (468)
Q Consensus 417 ~~av~~~l 424 (468)
.++++++|
T Consensus 312 ~~ai~~~~ 319 (319)
T TIGR02193 312 LAALEELL 319 (319)
T ss_pred HHHHHhhC
Confidence 99998775
No 147
>PRK10422 lipopolysaccharide core biosynthesis protein; Provisional
Probab=85.27 E-value=38 Score=32.89 Aligned_cols=41 Identities=12% Similarity=0.074 Sum_probs=37.1
Q ss_pred cceEEEecCCCccCHHHHHHHHHHHHhCCCCcEEEEEeCCC
Q 044031 2 KKTIALYPGPAFHHMISMVELGKLILQHRSDVSITILVPSM 42 (468)
Q Consensus 2 ~~~Iv~~~~~~~GHv~P~l~LA~~L~~~G~~h~Vt~~~~~~ 42 (468)
+++|+++-....|++.=...+.+.|+++-|+.+|++++...
T Consensus 5 ~~~ILii~~~~iGD~vl~~P~l~~Lk~~~P~a~I~~l~~~~ 45 (352)
T PRK10422 5 FRRILIIKMRFHGDMLLTTPVISSLKKNYPDAKIDVLLYQD 45 (352)
T ss_pred CceEEEEEecccCceeeHHHHHHHHHHHCCCCeEEEEeccC
Confidence 35799999999999999999999999998999999997654
No 148
>PF13439 Glyco_transf_4: Glycosyltransferase Family 4; PDB: 2JJM_E 3MBO_C 2GEJ_A 2GEK_A.
Probab=84.96 E-value=13 Score=31.31 Aligned_cols=32 Identities=9% Similarity=0.119 Sum_probs=24.5
Q ss_pred CCccCHHHHHHHHHHHHhCCCCcEEEEEeCCCCC
Q 044031 11 PAFHHMISMVELGKLILQHRSDVSITILVPSMPL 44 (468)
Q Consensus 11 ~~~GHv~P~l~LA~~L~~~G~~h~Vt~~~~~~~~ 44 (468)
...|=-.-+..|+++|+++| |+|++++.....
T Consensus 10 ~~GG~e~~~~~l~~~l~~~G--~~v~v~~~~~~~ 41 (177)
T PF13439_consen 10 NIGGAERVVLNLARALAKRG--HEVTVVSPGVKD 41 (177)
T ss_dssp SSSHHHHHHHHHHHHHHHTT---EEEEEESS-TT
T ss_pred CCChHHHHHHHHHHHHHHCC--CEEEEEEcCCCc
Confidence 35566678899999999999 999999765443
No 149
>COG0859 RfaF ADP-heptose:LPS heptosyltransferase [Cell envelope biogenesis, outer membrane]
Probab=84.81 E-value=39 Score=32.61 Aligned_cols=41 Identities=15% Similarity=0.164 Sum_probs=37.0
Q ss_pred ceEEEecCCCccCHHHHHHHHHHHHhCCCCcEEEEEeCCCC
Q 044031 3 KTIALYPGPAFHHMISMVELGKLILQHRSDVSITILVPSMP 43 (468)
Q Consensus 3 ~~Iv~~~~~~~GHv~P~l~LA~~L~~~G~~h~Vt~~~~~~~ 43 (468)
++|+++-....|++.=.+.+-..|+++.|+.++++++....
T Consensus 2 ~kIliir~~~iGD~vlt~p~~~~lk~~~P~a~i~~~~~~~~ 42 (334)
T COG0859 2 MKILVIRLSKLGDVVLTLPLLRTLKKAYPNAKIDVLVPKGF 42 (334)
T ss_pred ceEEEEeccchhHHHhHHHHHHHHHHHCCCCEEEEEeccch
Confidence 56999999999999999999999999999999999966543
No 150
>cd03793 GT1_Glycogen_synthase_GSY2_like Glycogen synthase, which is most closely related to the GT1 family of glycosyltransferases, catalyzes the transfer of a glucose molecule from UDP-glucose to a terminal branch of a glycogen molecule, a rate-limit step of glycogen biosynthesis. GSY2, the member of this family in S. cerevisiae, has been shown to possess glycogen synthase activity.
Probab=83.21 E-value=5.9 Score=40.85 Aligned_cols=83 Identities=14% Similarity=0.172 Sum_probs=49.6
Q ss_pred CHHhhhCccCcceEEe-cCCcc-hHHHHHHhCCcEEeccccc-chhhHHHHHHhhc-ceeeeeccCCcccccCCCCcccc
Q 044031 337 PQSTILGHESVGGFVT-HCGWS-SVVEAVTYGVPMIAWPLYA-EQFLNSVALVQEM-KVAMPMFLNGEEETIGNGEGVVS 412 (468)
Q Consensus 337 pq~~il~~~~~~~~it-hgG~~-s~~eal~~GvP~v~~P~~~-DQ~~na~~~~~~~-g~g~~~~~~~~~~~~~~~~~~~~ 412 (468)
+..+++..+++.++-+ +=|+| +++||+++|+|+|+-...+ ..... .+...- ..|+.+... ..++-.-+
T Consensus 467 ~y~E~~~g~dl~v~PS~yE~fG~~~lEAma~G~PvI~t~~~gf~~~v~--E~v~~~~~~gi~V~~r------~~~~~~e~ 538 (590)
T cd03793 467 DYEEFVRGCHLGVFPSYYEPWGYTPAECTVMGIPSITTNLSGFGCFME--EHIEDPESYGIYIVDR------RFKSPDES 538 (590)
T ss_pred chHHHhhhceEEEeccccCCCCcHHHHHHHcCCCEEEccCcchhhhhH--HHhccCCCceEEEecC------CccchHHH
Confidence 4667788888844433 34544 8999999999999988743 22222 122110 256666520 01101135
Q ss_pred HHHHHHHHHHHhcCc
Q 044031 413 AERVEERVRELMMGS 427 (468)
Q Consensus 413 ~~~l~~av~~~l~~~ 427 (468)
.++|++++.+++..+
T Consensus 539 v~~La~~m~~~~~~~ 553 (590)
T cd03793 539 VQQLTQYMYEFCQLS 553 (590)
T ss_pred HHHHHHHHHHHhCCc
Confidence 678888888888554
No 151
>TIGR03713 acc_sec_asp1 accessory Sec system protein Asp1. This protein is designated Asp1 because, along with SecY2, SecA2, and other proteins it is part of the accessory secretory protein system. The system is involved in the export of serine-rich glycoproteins important for virulence in a number of Gram-positive species, including Streptococcus gordonii and Staphylococcus aureus. This protein family is assigned to transport rather than glycosylation function, but the specific molecular role is unknown.
Probab=82.62 E-value=1.8 Score=44.52 Aligned_cols=92 Identities=7% Similarity=0.048 Sum_probs=60.1
Q ss_pred CCeEecCCCCHH---hhhCccCcceEEecC---CcchHHHHHHhCCcEEecccccchhhHHHHHHhhcceeeeeccCCcc
Q 044031 328 RGLVVKSWAPQS---TILGHESVGGFVTHC---GWSSVVEAVTYGVPMIAWPLYAEQFLNSVALVQEMKVAMPMFLNGEE 401 (468)
Q Consensus 328 ~~~~v~~~~pq~---~il~~~~~~~~ithg---G~~s~~eal~~GvP~v~~P~~~DQ~~na~~~~~~~g~g~~~~~~~~~ 401 (468)
..+.+.++.... .++.+..+ +|.=+ |.++..||+++|+|+| .+.....|. .-.=|..+.
T Consensus 409 ~~v~f~gy~~e~dl~~~~~~arl--~id~s~~eg~~~~ieAiS~GiPqI-------nyg~~~~V~-d~~NG~li~----- 473 (519)
T TIGR03713 409 ERIAFTTLTNEEDLISALDKLRL--IIDLSKEPDLYTQISGISAGIPQI-------NKVETDYVE-HNKNGYIID----- 473 (519)
T ss_pred cEEEEEecCCHHHHHHHHhhheE--EEECCCCCChHHHHHHHHcCCCee-------ecCCceeeE-cCCCcEEeC-----
Confidence 356666776632 35555555 77655 7779999999999999 222223332 213333332
Q ss_pred cccCCCCccccHHHHHHHHHHHhcCch-hHHHHHHHHHHHHHHH
Q 044031 402 ETIGNGEGVVSAERVEERVRELMMGSE-GKALRERSLEMRMMAA 444 (468)
Q Consensus 402 ~~~~~~~~~~~~~~l~~av~~~l~~~~-~~~~~~~a~~l~~~~~ 444 (468)
+..+|.++|..+|.+.+ +..+...|-+.++...
T Consensus 474 ----------d~~~l~~al~~~L~~~~~wn~~~~~sy~~~~~yS 507 (519)
T TIGR03713 474 ----------DISELLKALDYYLDNLKNWNYSLAYSIKLIDDYS 507 (519)
T ss_pred ----------CHHHHHHHHHHHHhCHHHHHHHHHHHHHHHHHhh
Confidence 56789999999999985 6777777766665443
No 152
>cd03788 GT1_TPS Trehalose-6-Phosphate Synthase (TPS) is a glycosyltransferase that catalyses the synthesis of alpha,alpha-1,1-trehalose-6-phosphate from glucose-6-phosphate using a UDP-glucose donor. It is a key enzyme in the trehalose synthesis pathway. Trehalose is a nonreducing disaccharide present in a wide variety of organisms and may serve as a source of energy and carbon. It is characterized most notably in insect, plant, and microbial cells. Its production is often associated with a variety of stress conditions, including desiccation, dehydration, heat, cold, and oxidation. This family represents the catalytic domain of the TPS. Some members of this domain family coexist with a C-terminal trehalose phosphatase domain.
Probab=82.42 E-value=7.1 Score=39.64 Aligned_cols=73 Identities=12% Similarity=0.124 Sum_probs=47.1
Q ss_pred ecCCCCHHhh---hCccCcceEEe---cCCcc-hHHHHHHhCCc----EEecccccchhhHHHHHHhhcceeeeeccCCc
Q 044031 332 VKSWAPQSTI---LGHESVGGFVT---HCGWS-SVVEAVTYGVP----MIAWPLYAEQFLNSVALVQEMKVAMPMFLNGE 400 (468)
Q Consensus 332 v~~~~pq~~i---l~~~~~~~~it---hgG~~-s~~eal~~GvP----~v~~P~~~DQ~~na~~~~~~~g~g~~~~~~~~ 400 (468)
+.+++++.++ +..+++ ||. +-|.| ++.||+++|+| +|+--..+- + +...-|+.+++
T Consensus 345 ~~g~v~~~el~~~y~~aDv--~v~pS~~Eg~~lv~lEAma~g~p~~g~vV~S~~~G~----~----~~~~~g~lv~p--- 411 (460)
T cd03788 345 LYRSLPREELAALYRAADV--ALVTPLRDGMNLVAKEYVACQDDDPGVLILSEFAGA----A----EELSGALLVNP--- 411 (460)
T ss_pred EeCCCCHHHHHHHHHhccE--EEeCccccccCcccceeEEEecCCCceEEEeccccc----h----hhcCCCEEECC---
Confidence 4467777654 666666 653 44544 77999999999 444322221 0 01134666664
Q ss_pred ccccCCCCccccHHHHHHHHHHHhcCc
Q 044031 401 EETIGNGEGVVSAERVEERVRELMMGS 427 (468)
Q Consensus 401 ~~~~~~~~~~~~~~~l~~av~~~l~~~ 427 (468)
.+.++++++|.++++++
T Consensus 412 ----------~d~~~la~ai~~~l~~~ 428 (460)
T cd03788 412 ----------YDIDEVADAIHRALTMP 428 (460)
T ss_pred ----------CCHHHHHHHHHHHHcCC
Confidence 57889999999999876
No 153
>PF04413 Glycos_transf_N: 3-Deoxy-D-manno-octulosonic-acid transferase (kdotransferase); InterPro: IPR007507 This is a domain found in proteins that transfer activated sugars to a variety of substrates, including glycogen, fructose-6-phosphate and lipopolysaccharides. Proteins bearing this domain transfer UDP, ADP, GDP or CMP linked sugars. This region is flanked at the N terminus by a signal peptide and at the C terminus by a glycosyl transferase group 1 domain (IPR001296 from INTERPRO). The eukaryotic glycogen synthases may be distant members of this bacterial family [].; GO: 0005529 sugar binding, 0016740 transferase activity, 0005975 carbohydrate metabolic process; PDB: 2XCI_A 2XCU_B.
Probab=82.34 E-value=3.8 Score=35.82 Aligned_cols=93 Identities=16% Similarity=0.100 Sum_probs=45.6
Q ss_pred CCCccCHHHHHHHHHHHHhCCCCcEEEEEeCCCCCCchhhhhhhhccccCCCCCeeEEEcCCCCCCCCCCChhHHHHHHH
Q 044031 10 GPAFHHMISMVELGKLILQHRSDVSITILVPSMPLEESKTCSYINSISHRLNPIISFYYLPAIQMPSETLSRADIAIESI 89 (468)
Q Consensus 10 ~~~~GHv~P~l~LA~~L~~~G~~h~Vt~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~i~~~~lp~~~~~~~~~~~~~~ 89 (468)
..+-|-++-...|+++|.++.|++.|.+.+++...... ..+. ..+.+...-+|.+ +
T Consensus 28 a~SvGE~~a~~~Li~~l~~~~p~~~illT~~T~tg~~~-~~~~-------~~~~v~~~~~P~D-~--------------- 83 (186)
T PF04413_consen 28 AASVGEVNAARPLIKRLRKQRPDLRILLTTTTPTGREM-ARKL-------LPDRVDVQYLPLD-F--------------- 83 (186)
T ss_dssp -SSHHHHHHHHHHHHHHTT---TS-EEEEES-CCHHHH-HHGG--------GGG-SEEE---S-S---------------
T ss_pred ECCHHHHHHHHHHHHHHHHhCCCCeEEEEecCCchHHH-HHHh-------CCCCeEEEEeCcc-C---------------
Confidence 46789999999999999999777999888764433211 1111 0112333324433 1
Q ss_pred HHhhHHHHHHHHhhhcCCCccEEEe----cCcH--HHhhhCCCCeEEEec
Q 044031 90 KLNSSNVFQALENISLTSKILSFII----TSTT--SFSYHPNIPTYTYFN 133 (468)
Q Consensus 90 ~~~~~~l~~ll~~~~~~~~pD~vI~----~~~~--~vA~~lgIP~i~~~~ 133 (468)
....+..++.+ +||++|. .|-. ..|++.|||.+....
T Consensus 84 ---~~~~~rfl~~~----~P~~~i~~EtElWPnll~~a~~~~ip~~LvNa 126 (186)
T PF04413_consen 84 ---PWAVRRFLDHW----RPDLLIWVETELWPNLLREAKRRGIPVVLVNA 126 (186)
T ss_dssp ---HHHHHHHHHHH------SEEEEES----HHHHHH-----S-EEEEEE
T ss_pred ---HHHHHHHHHHh----CCCEEEEEccccCHHHHHHHhhcCCCEEEEee
Confidence 11345667888 9999888 5543 367778999998644
No 154
>cd02070 corrinoid_protein_B12-BD B12 binding domain of corrinoid proteins. A family of small methanogenic corrinoid proteins that bind methyl-Co(III) 5-hydroxybenzimidazolylcobamide as a cofactor. They play a role on the methanogenesis from trimethylamine, dimethylamine or monomethylamine, which is initiated by a series of corrinoid-dependent methyltransferases.
Probab=81.23 E-value=12 Score=33.09 Aligned_cols=40 Identities=10% Similarity=0.032 Sum_probs=35.4
Q ss_pred ceEEEecCCCccCHHHHHHHHHHHHhCCCCcEEEEEeCCCCC
Q 044031 3 KTIALYPGPAFHHMISMVELGKLILQHRSDVSITILVPSMPL 44 (468)
Q Consensus 3 ~~Iv~~~~~~~GHv~P~l~LA~~L~~~G~~h~Vt~~~~~~~~ 44 (468)
++|++.+.++-.|-....-++..|..+| ++|+++....+.
T Consensus 83 ~~vl~~~~~gd~H~lG~~~v~~~l~~~G--~~vi~lG~~~p~ 122 (201)
T cd02070 83 GKVVIGTVEGDIHDIGKNLVATMLEANG--FEVIDLGRDVPP 122 (201)
T ss_pred CeEEEEecCCccchHHHHHHHHHHHHCC--CEEEECCCCCCH
Confidence 5899999999999999999999999999 999988655443
No 155
>cd03789 GT1_LPS_heptosyltransferase Lipopolysaccharide heptosyltransferase is involved in the biosynthesis of lipooligosaccharide (LOS). Lipopolysaccharide (LPS) is a major component of the outer membrane of gram-negative bacteria. LPS heptosyltransferase transfers heptose molecules from ADP-heptose to 3-deoxy-D-manno-octulosonic acid (KDO), a part of the inner core component of LPS. This family belongs to the GT-B structural superfamily of glycoslytransferases, which have characteristic N- and C-terminal domains each containing a typical Rossmann fold. The two domains have high structural homology despite minimal sequence homology. The large cleft that separates the two domains includes the catalytic center and permits a high degree of flexibility.
Probab=79.90 E-value=9.4 Score=35.70 Aligned_cols=39 Identities=18% Similarity=0.196 Sum_probs=35.6
Q ss_pred eEEEecCCCccCHHHHHHHHHHHHhCCCCcEEEEEeCCC
Q 044031 4 TIALYPGPAFHHMISMVELGKLILQHRSDVSITILVPSM 42 (468)
Q Consensus 4 ~Iv~~~~~~~GHv~P~l~LA~~L~~~G~~h~Vt~~~~~~ 42 (468)
+|+++-..+-|++.=...+.+.|+++.|+.+|++++...
T Consensus 1 kILii~~~~iGD~i~~~p~l~~Lk~~~P~~~I~~l~~~~ 39 (279)
T cd03789 1 RILVIRLSWIGDVVLATPLLRALKARYPDARITVLAPPW 39 (279)
T ss_pred CEEEEecccHHHHHHHHHHHHHHHHHCCCCEEEEEEChh
Confidence 488889999999999999999999999999999997654
No 156
>PF00731 AIRC: AIR carboxylase; InterPro: IPR000031 Phosphoribosylaminoimidazole carboxylase is a fusion protein in plants and fungi, but consists of two non-interacting proteins in bacteria, PurK and PurE. PurK, N5-carboxyaminoimidazole ribonucleotide (N5_CAIR) synthetase, catalyzes the conversion of 5-aminoimidazole ribonucleotide (AIR), ATP, and bicarbonate to N5-CAIR, ADP, and Pi. PurE converts N5-CAIR to CAIR, the sixth step of de novo purine biosynthesis. In the presence of high concentrations of bicarbonate, PurE is reported able to convert AIR to CAIR directly and without ATP. Some members of this family contain two copies of this domain []. The crystal structure of PurE indicates a unique quaternary structure that confirms the octameric nature of the enzyme [].; GO: 0004638 phosphoribosylaminoimidazole carboxylase activity, 0006189 'de novo' IMP biosynthetic process; PDB: 3TRH_O 2YWX_A 2NSL_A 1D7A_A 2NSJ_A 1QCZ_A 2ATE_A 2NSH_A 3RG8_C 3RGG_D ....
Probab=79.84 E-value=25 Score=29.43 Aligned_cols=139 Identities=22% Similarity=0.228 Sum_probs=70.2
Q ss_pred eEEeccCCCcCCCHHHHHHHHHHHHhCCCcEEEEEeCCCCccccCCChhHHhhccCCCeEecCCCCHHhhhCccCcceEE
Q 044031 272 VVFLCFGSRGTFSAPQLKEIAIGLERSNQRFLWVVRNPSNAAEAELPEGFLERTKERGLVVKSWAPQSTILGHESVGGFV 351 (468)
Q Consensus 272 ~v~vs~GS~~~~~~~~~~~~~~al~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~pq~~il~~~~~~~~i 351 (468)
.|-|-+||.+ +....+++...|+..|..+-..+-+. ...|+.+.+ ++...+ -.++++ ||
T Consensus 2 ~V~Ii~gs~S--D~~~~~~a~~~L~~~gi~~~~~V~sa-----HR~p~~l~~-----------~~~~~~-~~~~~v--iI 60 (150)
T PF00731_consen 2 KVAIIMGSTS--DLPIAEEAAKTLEEFGIPYEVRVASA-----HRTPERLLE-----------FVKEYE-ARGADV--II 60 (150)
T ss_dssp EEEEEESSGG--GHHHHHHHHHHHHHTT-EEEEEE--T-----TTSHHHHHH-----------HHHHTT-TTTESE--EE
T ss_pred eEEEEeCCHH--HHHHHHHHHHHHHHcCCCEEEEEEec-----cCCHHHHHH-----------HHHHhc-cCCCEE--EE
Confidence 4566678775 66778889999999887765544443 334444331 111111 012333 88
Q ss_pred ecCCcc----hHHHHHHhCCcEEecccccchhhH----HHHHHhhcceeeeeccCCcccccCCCCccccHHHHHHHHHHH
Q 044031 352 THCGWS----SVVEAVTYGVPMIAWPLYAEQFLN----SVALVQEMKVAMPMFLNGEEETIGNGEGVVSAERVEERVREL 423 (468)
Q Consensus 352 thgG~~----s~~eal~~GvP~v~~P~~~DQ~~n----a~~~~~~~g~g~~~~~~~~~~~~~~~~~~~~~~~l~~av~~~ 423 (468)
.=.|.. ++..++. -.|+|++|....+... ...+.---|+++..-. - ++-.++..+.-.|-.+
T Consensus 61 a~AG~~a~Lpgvva~~t-~~PVIgvP~~~~~~~g~d~l~S~vqMp~g~pvatv~--------i-~~~~nAA~~A~~ILa~ 130 (150)
T PF00731_consen 61 AVAGMSAALPGVVASLT-TLPVIGVPVSSGYLGGLDSLLSIVQMPSGVPVATVG--------I-NNGFNAALLAARILAL 130 (150)
T ss_dssp EEEESS--HHHHHHHHS-SS-EEEEEE-STTTTTHHHHHHHHT--TTS--EE-S--------S-THHHHHHHHHHHHHHT
T ss_pred EECCCcccchhhheecc-CCCEEEeecCcccccCcccHHHHHhccCCCCceEEE--------c-cCchHHHHHHHHHHhc
Confidence 877765 3344444 6899999987654422 2222111155554431 0 1123444444444332
Q ss_pred hcCchhHHHHHHHHHHHHHHHH
Q 044031 424 MMGSEGKALRERSLEMRMMAAT 445 (468)
Q Consensus 424 l~~~~~~~~~~~a~~l~~~~~~ 445 (468)
.|+ +++++.+.+++..++
T Consensus 131 -~d~---~l~~kl~~~~~~~~~ 148 (150)
T PF00731_consen 131 -KDP---ELREKLRAYREKMKE 148 (150)
T ss_dssp -T-H---HHHHHHHHHHHHHHH
T ss_pred -CCH---HHHHHHHHHHHHHHc
Confidence 466 788888777776665
No 157
>PF01975 SurE: Survival protein SurE; InterPro: IPR002828 This entry represents a SurE-like structural domain with a 3-layer alpha/bete/alpha topology that bears some topological similarity to the N-terminal domain of the glutaminase/asparaginase family. This domain is found in the stationary phase survival protein SurE, a metal ion-dependent phosphatase found in eubacteria, archaea and eukaryotes. In Escherichia coli, SurE also has activity as a nucleotidase and exopolyphosphatase, and may be involved in the stress response []. E. coli cells with mutations in the surE gene survive poorly in stationary phase []. The structure of SurE homologues have been determined from Thermotoga maritima [] and the archaea Pyrobaculum aerophilum []. The T. maritima SurE homologue has phosphatase activity that is inhibited by vanadate or tungstate, both of which bind adjacent to the divalent metal ion. This domain is found in acid phosphatases (3.1.3.2 from EC), 5'-nucleotidases (3.1.3.5 from EC), 3'-nucleotidases (3.1.3.6 from EC) and exopolyphosphatases (3.6.1.11 from EC).; GO: 0016787 hydrolase activity; PDB: 1L5X_B 2V4O_D 2V4N_A 2WQK_B 2E6G_G 2E69_D 2E6C_C 2E6B_D 2E6E_A 2E6H_A ....
Probab=79.36 E-value=2.2 Score=37.65 Aligned_cols=25 Identities=12% Similarity=0.205 Sum_probs=20.3
Q ss_pred HHHHHHHHHHHhCCCCcEEEEEeCCCC
Q 044031 17 ISMVELGKLILQHRSDVSITILVPSMP 43 (468)
Q Consensus 17 ~P~l~LA~~L~~~G~~h~Vt~~~~~~~ 43 (468)
-=+.+|++.|.+.| |+|+++.+...
T Consensus 14 ~Gi~aL~~~L~~~g--~~V~VvAP~~~ 38 (196)
T PF01975_consen 14 PGIRALAKALSALG--HDVVVVAPDSE 38 (196)
T ss_dssp HHHHHHHHHHTTTS--SEEEEEEESSS
T ss_pred HHHHHHHHHHHhcC--CeEEEEeCCCC
Confidence 44678999998889 99999976554
No 158
>TIGR02195 heptsyl_trn_II lipopolysaccharide heptosyltransferase II. This family consists of examples of ADP-heptose:LPS heptosyltransferase II, an enzyme of LPS inner core region biosynthesis. LPS, composed of lipid A, a core region, and O antigen, is found in the outer membrane of Gram-negative bacteria.
Probab=79.19 E-value=62 Score=31.07 Aligned_cols=38 Identities=18% Similarity=0.253 Sum_probs=34.7
Q ss_pred eEEEecCCCccCHHHHHHHHHHHHhCCCCcEEEEEeCC
Q 044031 4 TIALYPGPAFHHMISMVELGKLILQHRSDVSITILVPS 41 (468)
Q Consensus 4 ~Iv~~~~~~~GHv~P~l~LA~~L~~~G~~h~Vt~~~~~ 41 (468)
||+++-..+-|++.=...+.+.|+++-|+.+|++++..
T Consensus 1 rILii~~~~iGD~i~~~p~l~~Lk~~~P~a~I~~l~~~ 38 (334)
T TIGR02195 1 KILVIGPSWVGDMVMAQSLYRLLKKRYPQAVIDVLAPA 38 (334)
T ss_pred CEEEEccchhHHHHHHHHHHHHHHHHCCCCEEEEEech
Confidence 48899999999999999999999999888999999754
No 159
>PRK12342 hypothetical protein; Provisional
Probab=79.18 E-value=16 Score=33.73 Aligned_cols=93 Identities=13% Similarity=0.123 Sum_probs=51.9
Q ss_pred HHHHHHHHHhCCCCcEEEEEeCCCCCCchh-h-hhhhhccccCCCCCeeEEEcCCCCCCCCCCChhHHHHHHHHHhhHHH
Q 044031 19 MVELGKLILQHRSDVSITILVPSMPLEESK-T-CSYINSISHRLNPIISFYYLPAIQMPSETLSRADIAIESIKLNSSNV 96 (468)
Q Consensus 19 ~l~LA~~L~~~G~~h~Vt~~~~~~~~~~~~-~-~~~~~~~~~~~~~~i~~~~i~~~~lp~~~~~~~~~~~~~~~~~~~~l 96 (468)
.+..|-+|++.| .+||.++..++..... . ++.+.-- .. +-+-+.+..+.. . +. ......+
T Consensus 40 AlE~AlrLk~~g--~~Vtvls~Gp~~a~~~~l~r~alamG-----aD-~avli~d~~~~g-~---D~------~ata~~L 101 (254)
T PRK12342 40 AIEAASQLATDG--DEIAALTVGGSLLQNSKVRKDVLSRG-----PH-SLYLVQDAQLEH-A---LP------LDTAKAL 101 (254)
T ss_pred HHHHHHHHhhcC--CEEEEEEeCCChHhHHHHHHHHHHcC-----CC-EEEEEecCccCC-C---CH------HHHHHHH
Confidence 377788888778 9999998776542111 1 2222111 01 122233221211 1 11 1112234
Q ss_pred HHHHHhhhcCCCccEEEe----------cCcHHHhhhCCCCeEEEec
Q 044031 97 FQALENISLTSKILSFII----------TSTTSFSYHPNIPTYTYFN 133 (468)
Q Consensus 97 ~~ll~~~~~~~~pD~vI~----------~~~~~vA~~lgIP~i~~~~ 133 (468)
...+++. .+|+|++ --+..+|+.||+|++.+..
T Consensus 102 a~~i~~~----~~DLVl~G~~s~D~~tgqvg~~lA~~Lg~P~vt~v~ 144 (254)
T PRK12342 102 AAAIEKI----GFDLLLFGEGSGDLYAQQVGLLLGELLQLPVINAVS 144 (254)
T ss_pred HHHHHHh----CCCEEEEcCCcccCCCCCHHHHHHHHhCCCcEeeEE
Confidence 4556665 7999999 2256699999999998765
No 160
>TIGR02370 pyl_corrinoid methyltransferase cognate corrinoid proteins, Methanosarcina family. This model describes a subfamily of the B12 binding domain (pfam02607, pfam02310) proteins. Members of the seed alignment include corrinoid proteins specific to four different, mutally non-homologous enzymes of the genus Methanosarcina. Three of the four cognate enzymes (trimethylamine, dimethylamine, and monomethylamine methyltransferases) all have the unusual, ribosomally incorporated amino acid pyrrolysine at the active site. All act in systems in which a methyl group is transferred to the corrinoid protein to create methylcobalamin, from which the methyl group is later transferred elsewhere.
Probab=79.12 E-value=14 Score=32.65 Aligned_cols=41 Identities=10% Similarity=0.054 Sum_probs=36.9
Q ss_pred ceEEEecCCCccCHHHHHHHHHHHHhCCCCcEEEEEeCCCCCC
Q 044031 3 KTIALYPGPAFHHMISMVELGKLILQHRSDVSITILVPSMPLE 45 (468)
Q Consensus 3 ~~Iv~~~~~~~GHv~P~l~LA~~L~~~G~~h~Vt~~~~~~~~~ 45 (468)
++|++.+.++-.|-....-++..|..+| ++|+++..+.+.+
T Consensus 85 ~~vv~~t~~gd~H~lG~~~v~~~l~~~G--~~vi~LG~~vp~e 125 (197)
T TIGR02370 85 GKVVCGVAEGDVHDIGKNIVVTMLRANG--FDVIDLGRDVPID 125 (197)
T ss_pred CeEEEEeCCCchhHHHHHHHHHHHHhCC--cEEEECCCCCCHH
Confidence 5899999999999999999999999999 9999997766544
No 161
>PRK03359 putative electron transfer flavoprotein FixA; Reviewed
Probab=78.32 E-value=18 Score=33.37 Aligned_cols=94 Identities=11% Similarity=0.009 Sum_probs=52.6
Q ss_pred HHHHHHHHHhCCCCcEEEEEeCCCCCCc--hhhhhhhhccccCCCCCee-EEEcCCCCCCCCCCChhHHHHHHHHHhhHH
Q 044031 19 MVELGKLILQHRSDVSITILVPSMPLEE--SKTCSYINSISHRLNPIIS-FYYLPAIQMPSETLSRADIAIESIKLNSSN 95 (468)
Q Consensus 19 ~l~LA~~L~~~G~~h~Vt~~~~~~~~~~--~~~~~~~~~~~~~~~~~i~-~~~i~~~~lp~~~~~~~~~~~~~~~~~~~~ 95 (468)
.+..|-+|+++++..+||.++..++... ..++..+.- |.. -+.+.+..+. +. +. ......
T Consensus 41 AlE~Alrlke~~~g~~Vtvvs~Gp~~a~~~~~lr~aLAm-------GaD~avli~d~~~~-g~---D~------~~tA~~ 103 (256)
T PRK03359 41 AIEAACQLKQQAAEAQVTALSVGGKALTNAKGRKDVLSR-------GPDELIVVIDDQFE-QA---LP------QQTASA 103 (256)
T ss_pred HHHHHHHHhhhcCCCEEEEEEECCcchhhHHHHHHHHHc-------CCCEEEEEecCccc-Cc---CH------HHHHHH
Confidence 4788888998741269999987765522 223332221 111 1223322121 11 11 111223
Q ss_pred HHHHHHhhhcCCCccEEEe----------cCcHHHhhhCCCCeEEEec
Q 044031 96 VFQALENISLTSKILSFII----------TSTTSFSYHPNIPTYTYFN 133 (468)
Q Consensus 96 l~~ll~~~~~~~~pD~vI~----------~~~~~vA~~lgIP~i~~~~ 133 (468)
+...+++. .+|+|++ --+..+|+.||+|++.+..
T Consensus 104 La~ai~~~----~~DLVl~G~~s~D~~tgqvg~~lAe~Lg~P~vt~v~ 147 (256)
T PRK03359 104 LAAAAQKA----GFDLILCGDGSSDLYAQQVGLLVGEILNIPAINGVS 147 (256)
T ss_pred HHHHHHHh----CCCEEEEcCccccCCCCcHHHHHHHHhCCCceeeEE
Confidence 44556665 7999999 1355599999999998765
No 162
>TIGR02398 gluc_glyc_Psyn glucosylglycerol-phosphate synthase. Glucosylglycerol-phosphate synthase catalyzes the key step in the biosynthesis of the osmolyte glucosylglycerol. It is known in several cyanobacteria and in Pseudomonas anguilliseptica. The enzyme is closely related to the alpha,alpha-trehalose-phosphate synthase, likewise involved in osmolyte biosynthesis, of E. coli and many other bacteria. A close homolog from Xanthomonas campestris is excluded from this model and scores between trusted and noise.
Probab=76.51 E-value=51 Score=33.66 Aligned_cols=108 Identities=15% Similarity=0.066 Sum_probs=66.6
Q ss_pred eEecCCCCHHhhhC---ccCcceEEe--cCCcchHH-HHHHhCC----cEEecccccchhhHHHHHHhhcceeeeeccCC
Q 044031 330 LVVKSWAPQSTILG---HESVGGFVT--HCGWSSVV-EAVTYGV----PMIAWPLYAEQFLNSVALVQEMKVAMPMFLNG 399 (468)
Q Consensus 330 ~~v~~~~pq~~il~---~~~~~~~it--hgG~~s~~-eal~~Gv----P~v~~P~~~DQ~~na~~~~~~~g~g~~~~~~~ 399 (468)
+.+.+.+|+.++.+ -+++ ++|| .-|+|-++ |.++++. |+|.==+ --|. +.+.-++.+++
T Consensus 364 ~~~~~~v~~~el~alYr~ADV-~lvT~lrDGmNLVa~Eyva~~~~~~GvLILSef-----aGaa---~~l~~AllVNP-- 432 (487)
T TIGR02398 364 QFFTRSLPYEEVSAWFAMADV-MWITPLRDGLNLVAKEYVAAQGLLDGVLVLSEF-----AGAA---VELKGALLTNP-- 432 (487)
T ss_pred EEEcCCCCHHHHHHHHHhCCE-EEECccccccCcchhhHHhhhcCCCCCEEEecc-----ccch---hhcCCCEEECC--
Confidence 45667888776443 4554 2333 45888554 9999977 4444322 2222 34556788886
Q ss_pred cccccCCCCccccHHHHHHHHHHHhcCchhHHHHHHHHHHHHHHHHhhcCCCCCChHHHHHHHHHHhh
Q 044031 400 EEETIGNGEGVVSAERVEERVRELMMGSEGKALRERSLEMRMMAATAWNNNDGGSSFTAFSNLFDLWQ 467 (468)
Q Consensus 400 ~~~~~~~~~~~~~~~~l~~av~~~l~~~~~~~~~~~a~~l~~~~~~a~~~~~~g~~~~~~~~~~~~~~ 467 (468)
.+.++++++|.+.|+.+ ..|+.++++++.+.... . .+..=.++|+++|.
T Consensus 433 -----------~d~~~~A~ai~~AL~m~----~~Er~~R~~~l~~~v~~--~--d~~~W~~~fl~~l~ 481 (487)
T TIGR02398 433 -----------YDPVRMDETIYVALAMP----KAEQQARMREMFDAVNY--Y--DVQRWADEFLAAVS 481 (487)
T ss_pred -----------CCHHHHHHHHHHHHcCC----HHHHHHHHHHHHHHHhh--C--CHHHHHHHHHHHhh
Confidence 78899999999999987 45555555555554433 2 33444666666654
No 163
>PRK06718 precorrin-2 dehydrogenase; Reviewed
Probab=74.48 E-value=22 Score=31.48 Aligned_cols=149 Identities=13% Similarity=0.075 Sum_probs=75.4
Q ss_pred CceEEeccCCCcCCCHHHHHHHHHHHHhCCCcEEEEEeCCCCccccCCChhHHhhccCCCeEecCCCCHHhhhCccCcce
Q 044031 270 GSVVFLCFGSRGTFSAPQLKEIAIGLERSNQRFLWVVRNPSNAAEAELPEGFLERTKERGLVVKSWAPQSTILGHESVGG 349 (468)
Q Consensus 270 ~~~v~vs~GS~~~~~~~~~~~~~~al~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~pq~~il~~~~~~~ 349 (468)
+.++.|+.|.++ ...++.|...|..+.++.. . +.+.+.+......+.+.....+..-+..+++
T Consensus 11 k~vLVIGgG~va-------~~ka~~Ll~~ga~V~VIs~-~-------~~~~l~~l~~~~~i~~~~~~~~~~~l~~adl-- 73 (202)
T PRK06718 11 KRVVIVGGGKVA-------GRRAITLLKYGAHIVVISP-E-------LTENLVKLVEEGKIRWKQKEFEPSDIVDAFL-- 73 (202)
T ss_pred CEEEEECCCHHH-------HHHHHHHHHCCCeEEEEcC-C-------CCHHHHHHHhCCCEEEEecCCChhhcCCceE--
Confidence 348888877775 3455666667777655432 2 2222222222223333333333444666665
Q ss_pred EEecCCcchHHHHHH----hCCcEEecccccchhhHHHHHH----hhcceeeeeccCCcccccCCCCccccHHHHHHHHH
Q 044031 350 FVTHCGWSSVVEAVT----YGVPMIAWPLYAEQFLNSVALV----QEMKVAMPMFLNGEEETIGNGEGVVSAERVEERVR 421 (468)
Q Consensus 350 ~ithgG~~s~~eal~----~GvP~v~~P~~~DQ~~na~~~~----~~~g~g~~~~~~~~~~~~~~~~~~~~~~~l~~av~ 421 (468)
+|.--+--.+.+.++ .++++-+ .|.+..+..+. +.-++-+.+.++ ...-.-+..|++.++
T Consensus 74 ViaaT~d~elN~~i~~~a~~~~lvn~----~d~~~~~~f~~Pa~~~~g~l~iaIsT~--------G~sP~la~~lr~~ie 141 (202)
T PRK06718 74 VIAATNDPRVNEQVKEDLPENALFNV----ITDAESGNVVFPSALHRGKLTISVSTD--------GASPKLAKKIRDELE 141 (202)
T ss_pred EEEcCCCHHHHHHHHHHHHhCCcEEE----CCCCccCeEEEeeEEEcCCeEEEEECC--------CCChHHHHHHHHHHH
Confidence 888777777766665 3444322 34443332210 111333333321 111123355677777
Q ss_pred HHhcCchhHHHHHHHHHHHHHHHHhhc
Q 044031 422 ELMMGSEGKALRERSLEMRMMAATAWN 448 (468)
Q Consensus 422 ~~l~~~~~~~~~~~a~~l~~~~~~a~~ 448 (468)
+++ .++...+-+...++++.+++.+.
T Consensus 142 ~~~-~~~~~~~~~~~~~~R~~~k~~~~ 167 (202)
T PRK06718 142 ALY-DESYESYIDFLYECRQKIKELQI 167 (202)
T ss_pred HHc-chhHHHHHHHHHHHHHHHHHhCC
Confidence 766 33345677777778887776544
No 164
>PRK02261 methylaspartate mutase subunit S; Provisional
Probab=73.04 E-value=8.5 Score=31.75 Aligned_cols=43 Identities=23% Similarity=0.108 Sum_probs=37.9
Q ss_pred Cc-ceEEEecCCCccCHHHHHHHHHHHHhCCCCcEEEEEeCCCCCC
Q 044031 1 MK-KTIALYPGPAFHHMISMVELGKLILQHRSDVSITILVPSMPLE 45 (468)
Q Consensus 1 m~-~~Iv~~~~~~~GHv~P~l~LA~~L~~~G~~h~Vt~~~~~~~~~ 45 (468)
|| ++|++.+.+.-+|-.-..-++..|..+| ++|+++....+.+
T Consensus 1 ~~~~~vl~~~~~gD~H~lG~~iv~~~lr~~G--~eVi~LG~~vp~e 44 (137)
T PRK02261 1 MKKKTVVLGVIGADCHAVGNKILDRALTEAG--FEVINLGVMTSQE 44 (137)
T ss_pred CCCCEEEEEeCCCChhHHHHHHHHHHHHHCC--CEEEECCCCCCHH
Confidence 64 5899999999999999999999999999 9999997765543
No 165
>COG0438 RfaG Glycosyltransferase [Cell envelope biogenesis, outer membrane]
Probab=71.83 E-value=85 Score=29.13 Aligned_cols=81 Identities=19% Similarity=0.307 Sum_probs=51.3
Q ss_pred CCCeEecCCCC---HHhhhCccCcceEEec---CCcch-HHHHHHhCCcEEecccccchhhHHHHHHhhcceeeeeccCC
Q 044031 327 ERGLVVKSWAP---QSTILGHESVGGFVTH---CGWSS-VVEAVTYGVPMIAWPLYAEQFLNSVALVQEMKVAMPMFLNG 399 (468)
Q Consensus 327 ~~~~~v~~~~p---q~~il~~~~~~~~ith---gG~~s-~~eal~~GvP~v~~P~~~DQ~~na~~~~~~~g~g~~~~~~~ 399 (468)
..++....+++ ...++..+++ ++.- .|.|. +.||+++|+|+|+... ......+ ..-+.|. +..
T Consensus 256 ~~~v~~~g~~~~~~~~~~~~~~~~--~v~ps~~e~~~~~~~Ea~a~g~pvi~~~~----~~~~e~~-~~~~~g~-~~~-- 325 (381)
T COG0438 256 EDNVKFLGYVPDEELAELLASADV--FVLPSLSEGFGLVLLEAMAAGTPVIASDV----GGIPEVV-EDGETGL-LVP-- 325 (381)
T ss_pred CCcEEEecccCHHHHHHHHHhCCE--EEeccccccchHHHHHHHhcCCcEEECCC----CChHHHh-cCCCceE-ecC--
Confidence 35677778888 2335555665 5444 35543 5999999999977654 3233333 2312466 431
Q ss_pred cccccCCCCccccHHHHHHHHHHHhcCc
Q 044031 400 EEETIGNGEGVVSAERVEERVRELMMGS 427 (468)
Q Consensus 400 ~~~~~~~~~~~~~~~~l~~av~~~l~~~ 427 (468)
. ...+.+.+++..++++.
T Consensus 326 -------~---~~~~~~~~~i~~~~~~~ 343 (381)
T COG0438 326 -------P---GDVEELADALEQLLEDP 343 (381)
T ss_pred -------C---CCHHHHHHHHHHHhcCH
Confidence 1 25789999999999876
No 166
>cd07039 TPP_PYR_POX Pyrimidine (PYR) binding domain of POX. Thiamine pyrophosphate (TPP family), pyrimidine (PYR) binding domain of pyruvate oxidase (POX) subfamily. The PYR domain is found in many key metabolic enzymes which use TPP (also known as thiamine diphosphate) as a cofactor. TPP binds in the cleft formed by a PYR domain and a PP domain. The PYR domain, binds the aminopyrimidine ring of TPP, the PP domain binds the diphosphate residue. The PYR and PP domains have a common fold, but do not share strong sequence conservation. The PP domain is not included in this sub-family. Most TPP-dependent enzymes have the PYR and PP domains on the same subunit although these domains can be alternatively arranged in the primary structure. TPP-dependent enzymes are multisubunit proteins, the smallest catalytic unit being a dimer-of-active sites. Lactobacillus plantarum POX is a homotetramer (dimer-of-homodimers), having two active sites per homodimer lying between PYR and PP domains of differ
Probab=71.65 E-value=40 Score=28.66 Aligned_cols=27 Identities=19% Similarity=0.254 Sum_probs=22.6
Q ss_pred cceEEecCCcc------hHHHHHHhCCcEEecc
Q 044031 347 VGGFVTHCGWS------SVVEAVTYGVPMIAWP 373 (468)
Q Consensus 347 ~~~~ithgG~~------s~~eal~~GvP~v~~P 373 (468)
.+++++|+|-| ++.+|...++|+|++.
T Consensus 64 ~~v~~~t~GpG~~n~~~~l~~A~~~~~Pvl~I~ 96 (164)
T cd07039 64 LGVCLGSSGPGAIHLLNGLYDAKRDRAPVLAIA 96 (164)
T ss_pred CEEEEECCCCcHHHHHHHHHHHHhcCCCEEEEe
Confidence 34488888876 7889999999999996
No 167
>PRK02797 4-alpha-L-fucosyltransferase; Provisional
Probab=71.07 E-value=43 Score=31.74 Aligned_cols=135 Identities=16% Similarity=0.198 Sum_probs=78.5
Q ss_pred eEEeccCCCcCCCHHHHHHHHHHHH---hCCCcEEEEEeCC-CCccc-cCCChhHHhhccCCCe-EecCCCC---HHhhh
Q 044031 272 VVFLCFGSRGTFSAPQLKEIAIGLE---RSNQRFLWVVRNP-SNAAE-AELPEGFLERTKERGL-VVKSWAP---QSTIL 342 (468)
Q Consensus 272 ~v~vs~GS~~~~~~~~~~~~~~al~---~~~~~~l~~~~~~-~~~~~-~~~~~~~~~~~~~~~~-~v~~~~p---q~~il 342 (468)
.+-|-.|..+.. .+...+++++|. ..+.+++.-.+-+ .+.+. +.+-..-.+.....++ ++.+++| +..+|
T Consensus 146 ~~tIlvGNSgd~-SN~Hie~L~~l~~~~~~~v~ii~PlsYp~gn~~Yi~~V~~~~~~lF~~~~~~~L~e~l~f~eYl~lL 224 (322)
T PRK02797 146 KMTILVGNSGDR-SNRHIEALRALHQQFGDNVKIIVPMGYPANNQAYIEEVRQAGLALFGAENFQILTEKLPFDDYLALL 224 (322)
T ss_pred ceEEEEeCCCCC-cccHHHHHHHHHHHhCCCeEEEEECCcCCCCHHHHHHHHHHHHHhcCcccEEehhhhCCHHHHHHHH
Confidence 344445655533 333444445553 3445777666653 12110 0000000111121233 4556776 67799
Q ss_pred CccCcceEEec--CCcchHHHHHHhCCcEEecccccchhhHHHHHHhhcceeeeeccCCcccccCCCCccccHHHHHHHH
Q 044031 343 GHESVGGFVTH--CGWSSVVEAVTYGVPMIAWPLYAEQFLNSVALVQEMKVAMPMFLNGEEETIGNGEGVVSAERVEERV 420 (468)
Q Consensus 343 ~~~~~~~~ith--gG~~s~~eal~~GvP~v~~P~~~DQ~~na~~~~~~~g~g~~~~~~~~~~~~~~~~~~~~~~~l~~av 420 (468)
+.++++.|+++ =|.|++.-.+..|||++.- .+-++|.... +. |+-|-.+. ++ ++...+.++=
T Consensus 225 ~~~Dl~~f~~~RQQgiGnl~lLi~~G~~v~l~---r~n~fwqdl~-e~-gv~Vlf~~--------d~---L~~~~v~e~~ 288 (322)
T PRK02797 225 RQCDLGYFIFARQQGIGTLCLLIQLGKPVVLS---RDNPFWQDLT-EQ-GLPVLFTG--------DD---LDEDIVREAQ 288 (322)
T ss_pred HhCCEEEEeechhhHHhHHHHHHHCCCcEEEe---cCCchHHHHH-hC-CCeEEecC--------Cc---ccHHHHHHHH
Confidence 99999999886 4899999999999999976 3455665544 34 77775552 45 7888887775
Q ss_pred HHH
Q 044031 421 REL 423 (468)
Q Consensus 421 ~~~ 423 (468)
+++
T Consensus 289 rql 291 (322)
T PRK02797 289 RQL 291 (322)
T ss_pred HHH
Confidence 544
No 168
>PF04464 Glyphos_transf: CDP-Glycerol:Poly(glycerophosphate) glycerophosphotransferase ; InterPro: IPR007554 Wall-associated teichoic acids are a heterogeneous class of phosphate-rich polymers that are covalently linked to the cell wall peptidoglycan of Gram-positive bacteria. They consist of a main chain of phosphodiester-linked polyols and/or sugar moieties attached to peptidoglycan via a linkage unit. CDP-glycerol:poly(glycerophosphate) glycerophosphotransferase is responsible for the polymerisation of the main chain of the teichoic acid by sequential transfer of glycerol-phosphate units from CDP-glycerol to the linkage unit lipid [].; GO: 0047355 CDP-glycerol glycerophosphotransferase activity, 0016020 membrane; PDB: 3L7K_B 3L7L_D 3L7I_A 3L7J_D 3L7M_D.
Probab=70.98 E-value=5 Score=39.33 Aligned_cols=115 Identities=15% Similarity=0.192 Sum_probs=63.6
Q ss_pred CCeEe-cCCCCHHhhhCccCcceEEecCCcchHHHHHHhCCcEEecccccchhhHHHHHHhhcceeeeeccCCcccccCC
Q 044031 328 RGLVV-KSWAPQSTILGHESVGGFVTHCGWSSVVEAVTYGVPMIAWPLYAEQFLNSVALVQEMKVAMPMFLNGEEETIGN 406 (468)
Q Consensus 328 ~~~~v-~~~~pq~~il~~~~~~~~ithgG~~s~~eal~~GvP~v~~P~~~DQ~~na~~~~~~~g~g~~~~~~~~~~~~~~ 406 (468)
.+++. .+..+-.++|..+++ .||-.. +.+.|.+..++|+|....-.|.+... + |.-...... ..
T Consensus 252 ~~i~~~~~~~~~~~ll~~aDi--LITDyS-Si~fD~~~l~KPiify~~D~~~Y~~~-----r-g~~~~~~~~------~p 316 (369)
T PF04464_consen 252 SNIIFVSDNEDIYDLLAAADI--LITDYS-SIIFDFLLLNKPIIFYQPDLEEYEKE-----R-GFYFDYEED------LP 316 (369)
T ss_dssp TTEEE-TT-S-HHHHHHT-SE--EEESS--THHHHHGGGT--EEEE-TTTTTTTTT-----S-SBSS-TTTS------SS
T ss_pred CcEEECCCCCCHHHHHHhcCE--EEEech-hHHHHHHHhCCCEEEEeccHHHHhhc-----c-CCCCchHhh------CC
Confidence 45543 455567789999988 999994 68899999999999887666655221 1 333332110 00
Q ss_pred CCccccHHHHHHHHHHHhcCchhHHHHHHHHHHHHHHHHhhcCCCCCChHHHHHHH
Q 044031 407 GEGVVSAERVEERVRELMMGSEGKALRERSLEMRMMAATAWNNNDGGSSFTAFSNL 462 (468)
Q Consensus 407 ~~~~~~~~~l~~av~~~l~~~~~~~~~~~a~~l~~~~~~a~~~~~~g~~~~~~~~~ 462 (468)
..-.-+.++|.++|+.++++++ .++++.+++.+.+-.- . +|.++.+-++.+
T Consensus 317 g~~~~~~~eL~~~i~~~~~~~~--~~~~~~~~~~~~~~~~-~--Dg~s~eri~~~I 367 (369)
T PF04464_consen 317 GPIVYNFEELIEAIENIIENPD--EYKEKREKFRDKFFKY-N--DGNSSERIVNYI 367 (369)
T ss_dssp S-EESSHHHHHHHHTTHHHHHH--HTHHHHHHHHHHHSTT-----S-HHHHHHHHH
T ss_pred CceeCCHHHHHHHHHhhhhCCH--HHHHHHHHHHHHhCCC-C--CchHHHHHHHHH
Confidence 0112467899999999887552 4555556666665542 2 344444444433
No 169
>cd07038 TPP_PYR_PDC_IPDC_like Pyrimidine (PYR) binding domain of pyruvate decarboxylase (PDC), indolepyruvate decarboxylase (IPDC) and related proteins. Thiamine pyrophosphate (TPP family), pyrimidine (PYR) binding domain of pyruvate decarboxylase (PDC) and indolepyruvate decarboxylase (IPDC) subfamily. The PYR domain is found in many key metabolic enzymes which use TPP (also known as thiamine diphosphate) as a cofactor. TPP binds in the cleft formed by a PYR domain and a PP domain. The PYR domain, binds the aminopyrimidine ring of TPP, the PP domain binds the diphosphate residue. The PYR and PP domains have a common fold, but do not share strong sequence conservation. The PP domain is not included in this sub-family. Most TPP-dependent enzymes have the PYR and PP domains on the same subunit although these domains can be alternatively arranged in the primary structure. TPP-dependent enzymes are multisubunit proteins, the smallest catalytic unit being a dimer-of-active sites, for many
Probab=67.67 E-value=29 Score=29.49 Aligned_cols=28 Identities=25% Similarity=0.334 Sum_probs=22.0
Q ss_pred cceEEecCCcc------hHHHHHHhCCcEEeccc
Q 044031 347 VGGFVTHCGWS------SVVEAVTYGVPMIAWPL 374 (468)
Q Consensus 347 ~~~~ithgG~~------s~~eal~~GvP~v~~P~ 374 (468)
.++++++.|-| ++.+|...++|+|++.-
T Consensus 60 ~gv~~~t~GpG~~n~~~gl~~A~~~~~Pvl~i~g 93 (162)
T cd07038 60 LGALVTTYGVGELSALNGIAGAYAEHVPVVHIVG 93 (162)
T ss_pred CEEEEEcCCccHHHHHHHHHHHHHcCCCEEEEec
Confidence 34477777766 67889999999999963
No 170
>TIGR01470 cysG_Nterm siroheme synthase, N-terminal domain. This model represents a subfamily of CysG N-terminal region-related sequences. All sequences in the seed alignment for this model are N-terminal regions of known or predicted siroheme synthases. The C-terminal region of each is uroporphyrin-III C-methyltransferase (EC 2.1.1.107), which catalyzes the first step committed to the biosynthesis of either siroheme or cobalamin (vitamin B12) rather than protoheme (heme). The region represented by this model completes the process of oxidation and iron insertion to yield siroheme. Siroheme is a cofactor for nitrite and sulfite reductases, so siroheme synthase is CysG of cysteine biosynthesis in some organisms.
Probab=67.49 E-value=72 Score=28.31 Aligned_cols=150 Identities=13% Similarity=0.093 Sum_probs=72.3
Q ss_pred ceEEeccCCCcCCCHHHHHHHHHHHHhCCCcEEEEEeCCCCccccCCChhHHhhccCCCeEecCCCCHHhhhCccCcceE
Q 044031 271 SVVFLCFGSRGTFSAPQLKEIAIGLERSNQRFLWVVRNPSNAAEAELPEGFLERTKERGLVVKSWAPQSTILGHESVGGF 350 (468)
Q Consensus 271 ~~v~vs~GS~~~~~~~~~~~~~~al~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~pq~~il~~~~~~~~ 350 (468)
.++.|+.|... ..-+..|...|..+.++.... .+.+.+.....++.+..-..+...+....+ +
T Consensus 11 ~vlVvGgG~va-------~rk~~~Ll~~ga~VtVvsp~~--------~~~l~~l~~~~~i~~~~~~~~~~dl~~~~l--V 73 (205)
T TIGR01470 11 AVLVVGGGDVA-------LRKARLLLKAGAQLRVIAEEL--------ESELTLLAEQGGITWLARCFDADILEGAFL--V 73 (205)
T ss_pred eEEEECcCHHH-------HHHHHHHHHCCCEEEEEcCCC--------CHHHHHHHHcCCEEEEeCCCCHHHhCCcEE--E
Confidence 38888777664 334555666787766554322 122222212223433221112333555555 7
Q ss_pred EecCCcchHHHH-----HHhCCcEEe--cccccchhhHHHHHHhhcceeeeeccCCcccccCCCCccccHHHHHHHHHHH
Q 044031 351 VTHCGWSSVVEA-----VTYGVPMIA--WPLYAEQFLNSVALVQEMKVAMPMFLNGEEETIGNGEGVVSAERVEERVREL 423 (468)
Q Consensus 351 ithgG~~s~~ea-----l~~GvP~v~--~P~~~DQ~~na~~~~~~~g~g~~~~~~~~~~~~~~~~~~~~~~~l~~av~~~ 423 (468)
|..-|-..+.+. -..|+|+-+ -|-.+| +..-..+ +.-++-+.+.++ .. .-.-+..|++.|+++
T Consensus 74 i~at~d~~ln~~i~~~a~~~~ilvn~~d~~e~~~-f~~pa~~-~~g~l~iaisT~-------G~-sP~la~~lr~~ie~~ 143 (205)
T TIGR01470 74 IAATDDEELNRRVAHAARARGVPVNVVDDPELCS-FIFPSIV-DRSPVVVAISSG-------GA-APVLARLLRERIETL 143 (205)
T ss_pred EECCCCHHHHHHHHHHHHHcCCEEEECCCcccCe-EEEeeEE-EcCCEEEEEECC-------CC-CcHHHHHHHHHHHHh
Confidence 877777644443 346777733 232222 2222222 221233444431 11 112345677777777
Q ss_pred hcCchhHHHHHHHHHHHHHHHHhhc
Q 044031 424 MMGSEGKALRERSLEMRMMAATAWN 448 (468)
Q Consensus 424 l~~~~~~~~~~~a~~l~~~~~~a~~ 448 (468)
+.. +...+-+...++++.+++...
T Consensus 144 l~~-~~~~~~~~~~~~R~~~k~~~~ 167 (205)
T TIGR01470 144 LPP-SLGDLATLAATWRDAVKKRLP 167 (205)
T ss_pred cch-hHHHHHHHHHHHHHHHHhhCC
Confidence 742 233566666677777666533
No 171
>PF01075 Glyco_transf_9: Glycosyltransferase family 9 (heptosyltransferase); InterPro: IPR002201 The biosynthesis of disaccharides, oligosaccharides and polysaccharides involves the action of hundreds of different glycosyltransferases. These enzymes catalyse the transfer of sugar moieties from activated donor molecules to specific acceptor molecules, forming glycosidic bonds. A classification of glycosyltransferases using nucleotide diphospho-sugar, nucleotide monophospho-sugar and sugar phosphates (2.4.1.- from EC) and related proteins into distinct sequence based families has been described []. This classification is available on the CAZy (CArbohydrate-Active EnZymes) web site. The same three-dimensional fold is expected to occur within each of the families. Because 3-D structures are better conserved than sequences, several of the families defined on the basis of sequence similarities may have similar 3-D structures and therefore form 'clans'. Glycosyltransferase family 9 GT9 from CAZY comprises enzymes with two known activity; lipopolysaccharide N-acetylglucosaminyltransferase (2.4.1.56 from EC), heptosyltransferase (2.4 from EC). Heptosyltransferase I is thought to add L-glycero-D-manno-heptose to the inner 3-deoxy-D-manno-octulosonic acid (Kdo) residue of the lipopolysaccharide core []. Heptosyltransferase II is a glycosyltransferase involved in the synthesis of the inner core region of lipopolysaccharide []. Lipopolysaccharide is a major component of the outer leaflet of the outer membrane in Gram-negative bacteria. It is composed of three domains; lipid A, Core oligosaccharide and the O-antigen. These enzymes transfer heptose to the lipopolysaccharide core [].; GO: 0016757 transferase activity, transferring glycosyl groups, 0008152 metabolic process; PDB: 1PSW_A 2H1F_A 2GT1_A 3TOV_A 2H1H_A.
Probab=67.26 E-value=20 Score=32.71 Aligned_cols=99 Identities=11% Similarity=0.151 Sum_probs=52.2
Q ss_pred CCceEEeccCCCc---CCCHHHHHHHHHHHHhCCCcEEEEEeCCCCccccCCChhHHhhccCCCeEecCCCC---HHhhh
Q 044031 269 SGSVVFLCFGSRG---TFSAPQLKEIAIGLERSNQRFLWVVRNPSNAAEAELPEGFLERTKERGLVVKSWAP---QSTIL 342 (468)
Q Consensus 269 ~~~~v~vs~GS~~---~~~~~~~~~~~~al~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~p---q~~il 342 (468)
+++.|.+..|+.. ..+.+.+.++++.|.+.+.+++...+...+ +...-+.+......+.+.+.+-.+ ...++
T Consensus 104 ~~~~i~i~~~a~~~~k~wp~e~~~~l~~~l~~~~~~vvl~g~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~l~e~~ali 181 (247)
T PF01075_consen 104 DKPYIGINPGASWPSKRWPAEKWAELIERLKERGYRVVLLGGPEEQ--EKEIADQIAAGLQNPVINLAGKTSLRELAALI 181 (247)
T ss_dssp TSSEEEEE---SSGGGS--HHHHHHHHHHHCCCT-EEEE--SSHHH--HHHHHHHHHTTHTTTTEEETTTS-HHHHHHHH
T ss_pred cCCeEEEeecCCCccccCCHHHHHHHHHHHHhhCceEEEEccchHH--HHHHHHHHHHhcccceEeecCCCCHHHHHHHH
Confidence 4457888888764 667888999999998888666544433210 000001111111112333433333 34577
Q ss_pred CccCcceEEecCCcchHHHHHHhCCcEEec
Q 044031 343 GHESVGGFVTHCGWSSVVEAVTYGVPMIAW 372 (468)
Q Consensus 343 ~~~~~~~~ithgG~~s~~eal~~GvP~v~~ 372 (468)
.++++ +|+.- .|.+.=|.+.|+|+|++
T Consensus 182 ~~a~~--~I~~D-tg~~HlA~a~~~p~v~l 208 (247)
T PF01075_consen 182 SRADL--VIGND-TGPMHLAAALGTPTVAL 208 (247)
T ss_dssp HTSSE--EEEES-SHHHHHHHHTT--EEEE
T ss_pred hcCCE--EEecC-ChHHHHHHHHhCCEEEE
Confidence 78887 88755 47888889999999999
No 172
>PRK08057 cobalt-precorrin-6x reductase; Reviewed
Probab=67.19 E-value=39 Score=31.04 Aligned_cols=35 Identities=20% Similarity=0.249 Sum_probs=26.6
Q ss_pred CcceEEEecCCCccCHHHHHHHHHHHHhCCCCcEEEEEeCCC
Q 044031 1 MKKTIALYPGPAFHHMISMVELGKLILQHRSDVSITILVPSM 42 (468)
Q Consensus 1 m~~~Iv~~~~~~~GHv~P~l~LA~~L~~~G~~h~Vt~~~~~~ 42 (468)
|+++|+++..-+-|+ .||+.|.++| +.|+..+...
T Consensus 1 ~~~~IlvlgGT~egr-----~la~~L~~~g--~~v~~Svat~ 35 (248)
T PRK08057 1 MMPRILLLGGTSEAR-----ALARALAAAG--VDIVLSLAGR 35 (248)
T ss_pred CCceEEEEechHHHH-----HHHHHHHhCC--CeEEEEEccC
Confidence 677898887666664 7899999999 8877765443
No 173
>cd02067 B12-binding B12 binding domain (B12-BD). This domain binds different cobalamid derivates, like B12 (adenosylcobamide) or methylcobalamin or methyl-Co(III) 5-hydroxybenzimidazolylcobamide, it is found in several enzymes, such as glutamate mutase, methionine synthase and methylmalonyl-CoA mutase. Cobalamin undergoes a conformational change on binding the protein; the dimethylbenzimidazole group, which is coordinated to the cobalt in the free cofactor, moves away from the corrin and is replaced by a histidine contributed by the protein. The sequence Asp-X-His-X-X-Gly, which contains this histidine ligand, is conserved in many cobalamin-binding proteins.
Probab=66.66 E-value=10 Score=30.15 Aligned_cols=37 Identities=8% Similarity=-0.013 Sum_probs=33.0
Q ss_pred eEEEecCCCccCHHHHHHHHHHHHhCCCCcEEEEEeCCC
Q 044031 4 TIALYPGPAFHHMISMVELGKLILQHRSDVSITILVPSM 42 (468)
Q Consensus 4 ~Iv~~~~~~~GHv~P~l~LA~~L~~~G~~h~Vt~~~~~~ 42 (468)
+|++.+.+.-.|.....-++..|..+| ++|+......
T Consensus 1 ~vl~~~~~~e~H~lG~~~~~~~l~~~G--~~V~~lg~~~ 37 (119)
T cd02067 1 KVVIATVGGDGHDIGKNIVARALRDAG--FEVIDLGVDV 37 (119)
T ss_pred CEEEEeeCCchhhHHHHHHHHHHHHCC--CEEEECCCCC
Confidence 489999999999999999999999999 9998875443
No 174
>PLN03063 alpha,alpha-trehalose-phosphate synthase (UDP-forming); Provisional
Probab=66.24 E-value=33 Score=37.56 Aligned_cols=71 Identities=11% Similarity=0.055 Sum_probs=46.2
Q ss_pred CCCCHHh---hhCccCcceEEe---cCCcc-hHHHHHHhCCc---EEecccccchhhHHHHHHhhcc-eeeeeccCCccc
Q 044031 334 SWAPQST---ILGHESVGGFVT---HCGWS-SVVEAVTYGVP---MIAWPLYAEQFLNSVALVQEMK-VAMPMFLNGEEE 402 (468)
Q Consensus 334 ~~~pq~~---il~~~~~~~~it---hgG~~-s~~eal~~GvP---~v~~P~~~DQ~~na~~~~~~~g-~g~~~~~~~~~~ 402 (468)
.++|+.+ ++..+++ |+. +-|.| +..|++++|+| ++++.-++ -.+. .+| .|+.+++
T Consensus 362 ~~v~~~el~aly~~ADv--fvvtSlrEGmnLv~lEamA~g~p~~gvlVlSe~~---G~~~----~l~~~allVnP----- 427 (797)
T PLN03063 362 CSVDFNYLCALYAITDV--MLVTSLRDGMNLVSYEFVACQKAKKGVLVLSEFA---GAGQ----SLGAGALLVNP----- 427 (797)
T ss_pred CCCCHHHHHHHHHhCCE--EEeCccccccCcchhhHheeecCCCCCEEeeCCc---Cchh----hhcCCeEEECC-----
Confidence 3556544 4555555 663 45877 67799999999 44444221 1111 123 5788875
Q ss_pred ccCCCCccccHHHHHHHHHHHhcC
Q 044031 403 TIGNGEGVVSAERVEERVRELMMG 426 (468)
Q Consensus 403 ~~~~~~~~~~~~~l~~av~~~l~~ 426 (468)
.+.+.++++|.++|+.
T Consensus 428 --------~D~~~lA~AI~~aL~m 443 (797)
T PLN03063 428 --------WNITEVSSAIKEALNM 443 (797)
T ss_pred --------CCHHHHHHHHHHHHhC
Confidence 6888999999999983
No 175
>PRK10964 ADP-heptose:LPS heptosyl transferase I; Provisional
Probab=63.45 E-value=23 Score=33.92 Aligned_cols=135 Identities=14% Similarity=-0.002 Sum_probs=74.2
Q ss_pred eEE-eccCCCc--CCCHHHHHHHHHHHHhCCCcEEEEEeCCCCccccCCChhHHhhccCCCeEecCC--CC-HHhhhCcc
Q 044031 272 VVF-LCFGSRG--TFSAPQLKEIAIGLERSNQRFLWVVRNPSNAAEAELPEGFLERTKERGLVVKSW--AP-QSTILGHE 345 (468)
Q Consensus 272 ~v~-vs~GS~~--~~~~~~~~~~~~al~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~--~p-q~~il~~~ 345 (468)
.|. +-.||.. .++.+.+.++++.|...+.++++..|... +...-+.+.+. .+++.+.+- +. -..++.++
T Consensus 180 ~i~~~~~~s~~~k~Wp~e~~a~li~~l~~~~~~ivl~~G~~~---e~~~~~~i~~~--~~~~~l~g~~sL~elaali~~a 254 (322)
T PRK10964 180 YLVFLHATTRDDKHWPEAHWRELIGLLAPSGLRIKLPWGAEH---EEQRAKRLAEG--FPYVEVLPKLSLEQVARVLAGA 254 (322)
T ss_pred eEEEEeCCCcccccCCHHHHHHHHHHHHHCCCeEEEeCCCHH---HHHHHHHHHcc--CCcceecCCCCHHHHHHHHHhC
Confidence 444 4444432 56888999999999777777765545431 11111122211 112223222 22 33578888
Q ss_pred CcceEEecCCcchHHHHHHhCCcEEecccccchhhHHHHHHhhccee-eeeccCCcccccCCCCccccHHHHHHHHHHHh
Q 044031 346 SVGGFVTHCGWSSVVEAVTYGVPMIAWPLYAEQFLNSVALVQEMKVA-MPMFLNGEEETIGNGEGVVSAERVEERVRELM 424 (468)
Q Consensus 346 ~~~~~ithgG~~s~~eal~~GvP~v~~P~~~DQ~~na~~~~~~~g~g-~~~~~~~~~~~~~~~~~~~~~~~l~~av~~~l 424 (468)
++ ||+.- .|.+.=|.+.|+|+|++=-..|...++- +|-. ....+ ...|-.+ ++.+++-++++++|
T Consensus 255 ~l--~I~nD-SGp~HlA~A~g~p~valfGpt~p~~~~p-----~~~~~~~~~~---~~~cm~~---I~~e~V~~~~~~~l 320 (322)
T PRK10964 255 KA--VVSVD-TGLSHLTAALDRPNITLYGPTDPGLIGG-----YGKNQHACRS---PGKSMAD---LSAETVFQKLETLI 320 (322)
T ss_pred CE--EEecC-CcHHHHHHHhCCCEEEEECCCCcccccC-----CCCCceeecC---CCccccc---CCHHHHHHHHHHHh
Confidence 88 88765 4788889999999999833222211110 0100 01110 0112235 89999999998887
Q ss_pred c
Q 044031 425 M 425 (468)
Q Consensus 425 ~ 425 (468)
+
T Consensus 321 ~ 321 (322)
T PRK10964 321 S 321 (322)
T ss_pred h
Confidence 4
No 176
>PF05159 Capsule_synth: Capsule polysaccharide biosynthesis protein; InterPro: IPR007833 This family includes export proteins involved in capsule polysaccharide biosynthesis, such as KpsS P42218 from SWISSPROT and LipB P57038 from SWISSPROT. Capsule polysaccharide modification protein lipB/A is involved in the phospholipid modification of the capsular polysaccharide and is a strong requirement for its translocation to the cell surface. The capsule of Neisseria meningitidis serogroup B and of other meningococcal serogroups and other Gram-negative bacterial pathogens, are anchored in the outer membrane through a 1,2-diacylglycerol moiety. The lipA and lipB genes are located on the 3' end of the ctr operon. lipA and lipB do not encode proteins responsible for diacylglycerophosphatidic acid substitution of the meningococcal capsule polymer, but they are required for proper translocation and surface expression of the lipidated polymer []. KpsS is an unusual sulphate-modified form of the capsular polysaccharide in Rhizobium loti (Mesorhizobium loti). Many plants, including R. loti, enter into symbiotic relationships with bacteria that allow survival in nutrient-limiting environments. KpsS functions as a fucosyl sulphotransferase in vitro. The kpsS gene product shares no significant amino acid similarity with previously identified sulphotransferases []. Sulphated cell surface polysaccharides are required for optimum nodule formation but limit growth rate and nodule colonisation in M. loti [].; GO: 0000271 polysaccharide biosynthetic process, 0015774 polysaccharide transport
Probab=63.27 E-value=43 Score=31.11 Aligned_cols=43 Identities=19% Similarity=0.217 Sum_probs=34.2
Q ss_pred CeEecCCCCHHhhhCccCcceEEecCCcchHHHHHHhCCcEEeccc
Q 044031 329 GLVVKSWAPQSTILGHESVGGFVTHCGWSSVVEAVTYGVPMIAWPL 374 (468)
Q Consensus 329 ~~~v~~~~pq~~il~~~~~~~~ithgG~~s~~eal~~GvP~v~~P~ 374 (468)
.+++.+-++-.+++.+++. +||-.+ +.-.||+.+|+|++++..
T Consensus 184 ~~~~~~~~~~~~Ll~~s~~--VvtinS-tvGlEAll~gkpVi~~G~ 226 (269)
T PF05159_consen 184 VVIIDDDVNLYELLEQSDA--VVTINS-TVGLEALLHGKPVIVFGR 226 (269)
T ss_pred eEEECCCCCHHHHHHhCCE--EEEECC-HHHHHHHHcCCceEEecC
Confidence 3445567787889999998 787765 577899999999999863
No 177
>COG1618 Predicted nucleotide kinase [Nucleotide transport and metabolism]
Probab=62.01 E-value=86 Score=26.73 Aligned_cols=58 Identities=9% Similarity=-0.018 Sum_probs=42.7
Q ss_pred CcceEEEecCCCccCHHHHHHHHHHHHhCCCCcEEEEEeCCCCCCchhhhhhhhccccCCCCCeeEEEcCCC
Q 044031 1 MKKTIALYPGPAFHHMISMVELGKLILQHRSDVSITILVPSMPLEESKTCSYINSISHRLNPIISFYYLPAI 72 (468)
Q Consensus 1 m~~~Iv~~~~~~~GHv~P~l~LA~~L~~~G~~h~Vt~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~i~~~ 72 (468)
|.++|.+.-.|+-|-..-++.+++.|.+.| +.|-=+.+..-.+ .. ..-+++.+++...
T Consensus 4 ~~mki~ITG~PGvGKtTl~~ki~e~L~~~g--~kvgGf~t~EVR~------gG------kR~GF~Ivdl~tg 61 (179)
T COG1618 4 MAMKIFITGRPGVGKTTLVLKIAEKLREKG--YKVGGFITPEVRE------GG------KRIGFKIVDLATG 61 (179)
T ss_pred cceEEEEeCCCCccHHHHHHHHHHHHHhcC--ceeeeEEeeeeec------CC------eEeeeEEEEccCC
Confidence 456899999999999999999999999999 8886554443322 11 1226777777644
No 178
>PF07429 Glyco_transf_56: 4-alpha-L-fucosyltransferase glycosyl transferase group 56; InterPro: IPR009993 This family contains the bacterial enzyme 4-alpha-L-fucosyltransferase (Fuc4NAc transferase) (approximately 360 residues long). This catalyses the synthesis of Fuc4NAc-ManNAcA-GlcNAc-PP-Und (lipid III) as part of the biosynthetic pathway of enterobacterial common antigen (ECA), a polysaccharide comprised of the trisaccharide repeat unit Fuc4NAc-ManNAcA-GlcNAc [].; GO: 0008417 fucosyltransferase activity, 0009246 enterobacterial common antigen biosynthetic process, 0009276 Gram-negative-bacterium-type cell wall
Probab=61.53 E-value=1e+02 Score=29.80 Aligned_cols=137 Identities=14% Similarity=0.181 Sum_probs=82.0
Q ss_pred eEEeccCCCcCCCHHHHHHHHHHHHh---CCCcEEEEEeCCC-Cccc-cCCChhHHhhccCCCe-EecCCCC---HHhhh
Q 044031 272 VVFLCFGSRGTFSAPQLKEIAIGLER---SNQRFLWVVRNPS-NAAE-AELPEGFLERTKERGL-VVKSWAP---QSTIL 342 (468)
Q Consensus 272 ~v~vs~GS~~~~~~~~~~~~~~al~~---~~~~~l~~~~~~~-~~~~-~~~~~~~~~~~~~~~~-~v~~~~p---q~~il 342 (468)
.+.|-.|..+..+-+ ..+++++|.. .+.+++.-.+-++ +.+. +.+-..-.+.....++ ++.+++| +..+|
T Consensus 185 ~ltILvGNSgd~sNn-HieaL~~L~~~~~~~~kIivPLsYg~~n~~Yi~~V~~~~~~lF~~~~~~iL~e~mpf~eYl~lL 263 (360)
T PF07429_consen 185 KLTILVGNSGDPSNN-HIEALEALKQQFGDDVKIIVPLSYGANNQAYIQQVIQAGKELFGAENFQILTEFMPFDEYLALL 263 (360)
T ss_pred ceEEEEcCCCCCCcc-HHHHHHHHHHhcCCCeEEEEECCCCCchHHHHHHHHHHHHHhcCccceeEhhhhCCHHHHHHHH
Confidence 455555666533333 3334444443 3566666555431 1000 0010000111123355 3557887 66799
Q ss_pred CccCcceEEec--CCcchHHHHHHhCCcEEecccccchhhHHHHHHhhcceeeeeccCCcccccCCCCccccHHHHHHHH
Q 044031 343 GHESVGGFVTH--CGWSSVVEAVTYGVPMIAWPLYAEQFLNSVALVQEMKVAMPMFLNGEEETIGNGEGVVSAERVEERV 420 (468)
Q Consensus 343 ~~~~~~~~ith--gG~~s~~eal~~GvP~v~~P~~~DQ~~na~~~~~~~g~g~~~~~~~~~~~~~~~~~~~~~~~l~~av 420 (468)
..|+++.|.+. =|.|++.-.+..|+|++.- .+-+++-... +. |+-+... .++ ++...++++=
T Consensus 264 ~~cDl~if~~~RQQgiGnI~lLl~~G~~v~L~---~~np~~~~l~-~~-~ipVlf~--------~d~---L~~~~v~ea~ 327 (360)
T PF07429_consen 264 SRCDLGIFNHNRQQGIGNICLLLQLGKKVFLS---RDNPFWQDLK-EQ-GIPVLFY--------GDE---LDEALVREAQ 327 (360)
T ss_pred HhCCEEEEeechhhhHhHHHHHHHcCCeEEEe---cCChHHHHHH-hC-CCeEEec--------ccc---CCHHHHHHHH
Confidence 99999888775 5899999999999999875 4455554444 45 7666654 245 8999999998
Q ss_pred HHHhc
Q 044031 421 RELMM 425 (468)
Q Consensus 421 ~~~l~ 425 (468)
+++..
T Consensus 328 rql~~ 332 (360)
T PF07429_consen 328 RQLAN 332 (360)
T ss_pred HHHhh
Confidence 88764
No 179
>PF07801 DUF1647: Protein of unknown function (DUF1647); InterPro: IPR012444 This entry consists of hypothetical proteins of unknown function.
Probab=61.20 E-value=23 Score=29.31 Aligned_cols=67 Identities=9% Similarity=0.045 Sum_probs=50.2
Q ss_pred ceEEEecCCCccCHHHHHHHHHHHHhCCCCcEEEEEeCCCCCCchhhhhhhhccccCCCCCeeEEEcCCCCCCC
Q 044031 3 KTIALYPGPAFHHMISMVELGKLILQHRSDVSITILVPSMPLEESKTCSYINSISHRLNPIISFYYLPAIQMPS 76 (468)
Q Consensus 3 ~~Iv~~~~~~~GHv~P~l~LA~~L~~~G~~h~Vt~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~i~~~~lp~ 76 (468)
.+|+|++.-+.+|+.-.+.+.+.+++..|+|.+.+..-.-... .+..+.. ..+++++...+....|.
T Consensus 60 ~~vvfVSa~S~~h~~~~~~~i~si~~~~P~~k~ilY~LgL~~~------~i~~L~~-~~~n~evr~Fn~s~YP~ 126 (142)
T PF07801_consen 60 SDVVFVSATSDNHFNESMKSISSIRKFYPNHKIILYDLGLSEE------QIKKLKK-NFCNVEVRKFNFSKYPK 126 (142)
T ss_pred CccEEEEEecchHHHHHHHHHHHHHHHCCCCcEEEEeCCCCHH------HHHHHHh-cCCceEEEECCCccCcH
Confidence 4799999999999999999999999999999999984432221 2333321 23688888887775554
No 180
>TIGR00725 conserved hypothetical protein, DprA/Smf-related, family 1. This model represents one branch of a subfamily of uncharacterized proteins. Both PSI-BLAST and weak hits by this model show a low level of similarity and suggest an evolutionary relationship of the subfamily to the DprA/Smf family of DNA-processing proteins involved in chromosomal transformation with foreign DNA. Both Aquifex aeolicus and Mycobacterium leprae have one member in each of two branches of this subfamily, suggesting the branches may have distinct functions. This family is one of several families within the scope of PFAM model pfam03641, several members of which are annotated as lysine decarboxylases. That larger family, and the branch described by this model, have a well-conserved motif PGGXGTXXE.
Probab=60.52 E-value=62 Score=27.42 Aligned_cols=99 Identities=12% Similarity=0.077 Sum_probs=53.8
Q ss_pred cchhHHhhcCCCCCceEEeccCCCcCCCHHHHHHHHHHHHhCCCcEEEEEeCCCCccccCCChhH-HhhccCCCeEecCC
Q 044031 257 SSDCLTWLDSQPSGSVVFLCFGSRGTFSAPQLKEIAIGLERSNQRFLWVVRNPSNAAEAELPEGF-LERTKERGLVVKSW 335 (468)
Q Consensus 257 ~~~l~~~l~~~~~~~~v~vs~GS~~~~~~~~~~~~~~al~~~~~~~l~~~~~~~~~~~~~~~~~~-~~~~~~~~~~v~~~ 335 (468)
..++-++|.+.. ...++.|..+ ....+.++..+.+-+++=++... . .......-.++.++
T Consensus 20 A~~lg~~La~~g---~~lv~Gg~~G-----lM~a~a~ga~~~gg~viGVlp~~-----------l~~~~~~~~~~i~~~~ 80 (159)
T TIGR00725 20 AYRLGKELAKKG---HILINGGRTG-----VMEAVSKGAREAGGLVVGILPDE-----------DFAGNPYLTIKVKTGM 80 (159)
T ss_pred HHHHHHHHHHCC---CEEEcCCchh-----HHHHHHHHHHHCCCeEEEECChh-----------hccCCCCceEEEECCC
Confidence 345667776643 4555544433 23345555555555554333321 1 00000111233344
Q ss_pred -CCHHhhhCccCcceEEecCCcchHHH---HHHhCCcEEeccc
Q 044031 336 -APQSTILGHESVGGFVTHCGWSSVVE---AVTYGVPMIAWPL 374 (468)
Q Consensus 336 -~pq~~il~~~~~~~~ithgG~~s~~e---al~~GvP~v~~P~ 374 (468)
.+...++...+..+++--||.||+.| ++.+++|+++++.
T Consensus 81 ~~~Rk~~m~~~sda~IvlpGG~GTL~E~~~a~~~~kpv~~l~~ 123 (159)
T TIGR00725 81 NFARNFILVRSADVVVSVGGGYGTAIEILGAYALGGPVVVLRG 123 (159)
T ss_pred cchHHHHHHHHCCEEEEcCCchhHHHHHHHHHHcCCCEEEEEC
Confidence 44666666555556777789998765 5889999999985
No 181
>PLN02470 acetolactate synthase
Probab=59.50 E-value=26 Score=36.86 Aligned_cols=91 Identities=18% Similarity=0.222 Sum_probs=49.5
Q ss_pred ccCCCcCCCHHH--HHHHHHHHHhCCCcEEEEEeCCCCccccCCChhHHhhc-cCCCeEe--cC------CCCHHhhhCc
Q 044031 276 CFGSRGTFSAPQ--LKEIAIGLERSNQRFLWVVRNPSNAAEAELPEGFLERT-KERGLVV--KS------WAPQSTILGH 344 (468)
Q Consensus 276 s~GS~~~~~~~~--~~~~~~al~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~-~~~~~~v--~~------~~pq~~il~~ 344 (468)
+|||....+... ...+++.|++.|++.|+-+.+. ..+ .+.... ...++.+ .. ++-.-.-...
T Consensus 2 ~~~~~~~~~~~~~~a~~l~~~L~~~GV~~vFg~pG~-----~~~--~l~dal~~~~~i~~i~~rhE~~A~~~Adgyar~t 74 (585)
T PLN02470 2 TFQSRFAPDEPRKGADILVEALEREGVDTVFAYPGG-----ASM--EIHQALTRSNCIRNVLCRHEQGEVFAAEGYAKAS 74 (585)
T ss_pred CcccCCCCCccccHHHHHHHHHHHcCCCEEEEcCCc-----ccH--HHHHHHhccCCceEEEeccHHHHHHHHHHHHHHh
Confidence 466664333322 3457777777777777665543 001 111111 1112211 11 1111112233
Q ss_pred cCcceEEecCCcc------hHHHHHHhCCcEEecc
Q 044031 345 ESVGGFVTHCGWS------SVVEAVTYGVPMIAWP 373 (468)
Q Consensus 345 ~~~~~~ithgG~~------s~~eal~~GvP~v~~P 373 (468)
...+++++|.|-| ++++|...++|+|++.
T Consensus 75 g~~gv~~~t~GPG~~N~l~gia~A~~~~~Pvl~I~ 109 (585)
T PLN02470 75 GKVGVCIATSGPGATNLVTGLADALLDSVPLVAIT 109 (585)
T ss_pred CCCEEEEECCCccHHHHHHHHHHHHhcCCcEEEEe
Confidence 4566699999977 7889999999999995
No 182
>PRK01231 ppnK inorganic polyphosphate/ATP-NAD kinase; Provisional
Probab=58.95 E-value=60 Score=30.72 Aligned_cols=52 Identities=15% Similarity=0.205 Sum_probs=37.2
Q ss_pred ceEEecCCcchHHHHHH----hCCcEEecccccchhhHHHHHHhhcceeeeeccCCcccccCCCCccccHHHHHHHHHHH
Q 044031 348 GGFVTHCGWSSVVEAVT----YGVPMIAWPLYAEQFLNSVALVQEMKVAMPMFLNGEEETIGNGEGVVSAERVEERVREL 423 (468)
Q Consensus 348 ~~~ithgG~~s~~eal~----~GvP~v~~P~~~DQ~~na~~~~~~~g~g~~~~~~~~~~~~~~~~~~~~~~~l~~av~~~ 423 (468)
+++|+=||-||+++++. .++|++++... .+|.... ++.+++.++|.++
T Consensus 64 d~vi~~GGDGt~l~~~~~~~~~~~Pvlgin~G--------------~lGFl~~--------------~~~~~~~~~l~~~ 115 (295)
T PRK01231 64 DLVIVVGGDGSLLGAARALARHNVPVLGINRG--------------RLGFLTD--------------IRPDELEFKLAEV 115 (295)
T ss_pred CEEEEEeCcHHHHHHHHHhcCCCCCEEEEeCC--------------ccccccc--------------CCHHHHHHHHHHH
Confidence 34999999999999975 36788887652 2332222 6678888888888
Q ss_pred hcCc
Q 044031 424 MMGS 427 (468)
Q Consensus 424 l~~~ 427 (468)
+++.
T Consensus 116 ~~g~ 119 (295)
T PRK01231 116 LDGH 119 (295)
T ss_pred HcCC
Confidence 8654
No 183
>cd02069 methionine_synthase_B12_BD B12 binding domain of methionine synthase. This domain binds methylcobalamin, which it uses as an intermediate methyl carrier from methyltetrahydrofolate (CH3H4folate) to homocysteine (Hcy).
Probab=58.67 E-value=80 Score=28.25 Aligned_cols=41 Identities=20% Similarity=0.149 Sum_probs=36.5
Q ss_pred ceEEEecCCCccCHHHHHHHHHHHHhCCCCcEEEEEeCCCCCC
Q 044031 3 KTIALYPGPAFHHMISMVELGKLILQHRSDVSITILVPSMPLE 45 (468)
Q Consensus 3 ~~Iv~~~~~~~GHv~P~l~LA~~L~~~G~~h~Vt~~~~~~~~~ 45 (468)
.+|++.+.++-.|-....-++..|..+| ++|+++..+.+.+
T Consensus 89 ~~vvl~t~~gd~HdiG~~iv~~~l~~~G--~~Vi~LG~~vp~e 129 (213)
T cd02069 89 GKIVLATVKGDVHDIGKNLVGVILSNNG--YEVIDLGVMVPIE 129 (213)
T ss_pred CeEEEEeCCCchhHHHHHHHHHHHHhCC--CEEEECCCCCCHH
Confidence 5899999999999999999999999999 9999997665543
No 184
>PRK02155 ppnK NAD(+)/NADH kinase family protein; Provisional
Probab=57.54 E-value=77 Score=29.94 Aligned_cols=26 Identities=23% Similarity=0.194 Sum_probs=21.6
Q ss_pred ceEEecCCcchHHHHHHh----CCcEEecc
Q 044031 348 GGFVTHCGWSSVVEAVTY----GVPMIAWP 373 (468)
Q Consensus 348 ~~~ithgG~~s~~eal~~----GvP~v~~P 373 (468)
+++|+-||=||+++++.. ++|++++-
T Consensus 65 d~vi~~GGDGt~l~~~~~~~~~~~pilGIn 94 (291)
T PRK02155 65 DLAVVLGGDGTMLGIGRQLAPYGVPLIGIN 94 (291)
T ss_pred CEEEEECCcHHHHHHHHHhcCCCCCEEEEc
Confidence 349999999999999774 67888775
No 185
>TIGR00715 precor6x_red precorrin-6x reductase. This enzyme was found to be a monomer by gel filtration.
Probab=57.25 E-value=64 Score=29.81 Aligned_cols=32 Identities=16% Similarity=0.200 Sum_probs=23.1
Q ss_pred eEEEecCCCccCHHHHHHHHHHHHhCCCCcEEEEEeCCC
Q 044031 4 TIALYPGPAFHHMISMVELGKLILQHRSDVSITILVPSM 42 (468)
Q Consensus 4 ~Iv~~~~~~~GHv~P~l~LA~~L~~~G~~h~Vt~~~~~~ 42 (468)
+|+++. +.|. ...||+.|.++| |+|+..+.+.
T Consensus 2 ~ILvlG--GT~e---gr~la~~L~~~g--~~v~~s~~t~ 33 (256)
T TIGR00715 2 TVLLMG--GTVD---SRAIAKGLIAQG--IEILVTVTTS 33 (256)
T ss_pred eEEEEe--chHH---HHHHHHHHHhCC--CeEEEEEccC
Confidence 355554 3342 778999999999 9998876544
No 186
>PF02441 Flavoprotein: Flavoprotein; InterPro: IPR003382 This entry contains a diverse range of flavoprotein enzymes, including epidermin biosynthesis protein, EpiD, which has been shown to be a flavoprotein that binds FMN []. This enzyme catalyzes the removal of two reducing equivalents from the cysteine residue of the C-terminal meso-lanthionine of epidermin to form a --C==C-- double bond. This family also includes the B chain of dipicolinate synthase a small polar molecule that accumulates to high concentrations in bacterial endospores, and is thought to play a role in spore heat resistance, or the maintenance of heat resistance []. Dipicolinate synthase catalyses the formation of dipicolinic acid from dihydroxydipicolinic acid. This family also includes phenylacrylic acid decarboxylase 4.1.1 from EC [].; GO: 0003824 catalytic activity; PDB: 3QJG_L 1G63_G 1G5Q_L 1P3Y_1 1QZU_A 1E20_A 1MVN_A 1MVL_A 3ZQU_A 2EJB_A ....
Probab=56.64 E-value=21 Score=28.96 Aligned_cols=36 Identities=11% Similarity=0.078 Sum_probs=29.1
Q ss_pred ceEEEecCCCccCHHHHHHHHHHHHhCCCCcEEEEEeCC
Q 044031 3 KTIALYPGPAFHHMISMVELGKLILQHRSDVSITILVPS 41 (468)
Q Consensus 3 ~~Iv~~~~~~~GHv~P~l~LA~~L~~~G~~h~Vt~~~~~ 41 (468)
+||++...|+.+=.. ...+.++|.++| ++|.++.+.
T Consensus 1 k~i~l~vtGs~~~~~-~~~~l~~L~~~g--~~v~vv~S~ 36 (129)
T PF02441_consen 1 KRILLGVTGSIAAYK-APDLLRRLKRAG--WEVRVVLSP 36 (129)
T ss_dssp -EEEEEE-SSGGGGG-HHHHHHHHHTTT--SEEEEEESH
T ss_pred CEEEEEEECHHHHHH-HHHHHHHHhhCC--CEEEEEECC
Confidence 368888888877777 999999999999 999998554
No 187
>COG0801 FolK 7,8-dihydro-6-hydroxymethylpterin-pyrophosphokinase [Coenzyme metabolism]
Probab=55.72 E-value=26 Score=29.64 Aligned_cols=37 Identities=22% Similarity=0.140 Sum_probs=28.6
Q ss_pred eEEeccCCCcCCCHHHHHHHHHHHHhCCCcEEEEEeC
Q 044031 272 VVFLCFGSRGTFSAPQLKEIAIGLERSNQRFLWVVRN 308 (468)
Q Consensus 272 ~v~vs~GS~~~~~~~~~~~~~~al~~~~~~~l~~~~~ 308 (468)
.+|+|+||......++++..+.+|.+.+..-++.+.+
T Consensus 3 ~vyl~LGSNlgd~~~~l~~A~~~L~~~~~~~v~~~S~ 39 (160)
T COG0801 3 RVYLGLGSNLGDRLKQLRAALAALDALADIRVVAVSP 39 (160)
T ss_pred EEEEEecCCCCCHHHHHHHHHHHHHhCCCceEEEecc
Confidence 7999999998888888999999998876533444443
No 188
>PRK07206 hypothetical protein; Provisional
Probab=54.97 E-value=39 Score=33.68 Aligned_cols=35 Identities=11% Similarity=-0.000 Sum_probs=26.4
Q ss_pred CcceEEEecCCCccCHHHHHHHHHHHHhCCCCcEEEEEeCCC
Q 044031 1 MKKTIALYPGPAFHHMISMVELGKLILQHRSDVSITILVPSM 42 (468)
Q Consensus 1 m~~~Iv~~~~~~~GHv~P~l~LA~~L~~~G~~h~Vt~~~~~~ 42 (468)
||++|+++-.... ...+++.++++| +++.+++...
T Consensus 1 ~~k~~liv~~~~~-----~~~~~~a~~~~G--~~~v~v~~~~ 35 (416)
T PRK07206 1 MMKKVVIVDPFSS-----GKFLAPAFKKRG--IEPIAVTSSC 35 (416)
T ss_pred CCCeEEEEcCCch-----HHHHHHHHHHcC--CeEEEEEcCC
Confidence 7778888875433 346889999999 9988886543
No 189
>PF12146 Hydrolase_4: Putative lysophospholipase; InterPro: IPR022742 This domain is found in bacteria and eukaryotes and is approximately 110 amino acids in length. Many members are annotated as being lysophospholipases, and others as alpha-beta hydrolase fold-containing proteins.
Probab=54.72 E-value=25 Score=25.75 Aligned_cols=33 Identities=6% Similarity=0.048 Sum_probs=29.2
Q ss_pred eEEEecCCCccCHHHHHHHHHHHHhCCCCcEEEEE
Q 044031 4 TIALYPGPAFHHMISMVELGKLILQHRSDVSITIL 38 (468)
Q Consensus 4 ~Iv~~~~~~~GHv~P~l~LA~~L~~~G~~h~Vt~~ 38 (468)
-++++..+...|..-+-.+|+.|.++| +.|...
T Consensus 17 ~~v~i~HG~~eh~~ry~~~a~~L~~~G--~~V~~~ 49 (79)
T PF12146_consen 17 AVVVIVHGFGEHSGRYAHLAEFLAEQG--YAVFAY 49 (79)
T ss_pred EEEEEeCCcHHHHHHHHHHHHHHHhCC--CEEEEE
Confidence 478888899999999999999999999 777655
No 190
>COG2086 FixA Electron transfer flavoprotein, beta subunit [Energy production and conversion]
Probab=53.94 E-value=75 Score=29.39 Aligned_cols=93 Identities=12% Similarity=0.025 Sum_probs=51.8
Q ss_pred HHHHHHHHhCCCCcEEEEEeCCCCCCchhhhhhhhccccCCCCCee-EEEcCCCCCCCCCCChhHHHHHHHHHhhHHHHH
Q 044031 20 VELGKLILQHRSDVSITILVPSMPLEESKTCSYINSISHRLNPIIS-FYYLPAIQMPSETLSRADIAIESIKLNSSNVFQ 98 (468)
Q Consensus 20 l~LA~~L~~~G~~h~Vt~~~~~~~~~~~~~~~~~~~~~~~~~~~i~-~~~i~~~~lp~~~~~~~~~~~~~~~~~~~~l~~ 98 (468)
+..|-+|+++|..-+|+.++..++......+.... .|.+ .+-+.+. .+..... ......+..
T Consensus 43 vEeAlrLke~~~~~eV~vlt~Gp~~a~~~lr~aLA-------mGaDraili~d~----~~~~~d~------~~ta~~Laa 105 (260)
T COG2086 43 VEEALRLKEKGYGGEVTVLTMGPPQAEEALREALA-------MGADRAILITDR----AFAGADP------LATAKALAA 105 (260)
T ss_pred HHHHHHhhccCCCceEEEEEecchhhHHHHHHHHh-------cCCCeEEEEecc----cccCccH------HHHHHHHHH
Confidence 56777888843227899998776655443332111 1222 1222222 1111111 112223445
Q ss_pred HHHhhhcCCCccEEEe----------cCcHHHhhhCCCCeEEEec
Q 044031 99 ALENISLTSKILSFII----------TSTTSFSYHPNIPTYTYFN 133 (468)
Q Consensus 99 ll~~~~~~~~pD~vI~----------~~~~~vA~~lgIP~i~~~~ 133 (468)
.+++. ++|+|++ --+..+|+.||+|++.+..
T Consensus 106 ~~~~~----~~~LVl~G~qa~D~~t~qvg~~lAe~Lg~P~~t~v~ 146 (260)
T COG2086 106 AVKKI----GPDLVLTGKQAIDGDTGQVGPLLAELLGWPQVTYVS 146 (260)
T ss_pred HHHhc----CCCEEEEecccccCCccchHHHHHHHhCCceeeeEE
Confidence 56666 9999998 2256699999999998755
No 191
>PRK04965 NADH:flavorubredoxin oxidoreductase; Provisional
Probab=53.68 E-value=14 Score=36.37 Aligned_cols=37 Identities=19% Similarity=0.213 Sum_probs=30.9
Q ss_pred CcceEEEecCCCccCHHHHHHHHHHHHhCCCCcEEEEEeCCC
Q 044031 1 MKKTIALYPGPAFHHMISMVELGKLILQHRSDVSITILVPSM 42 (468)
Q Consensus 1 m~~~Iv~~~~~~~GHv~P~l~LA~~L~~~G~~h~Vt~~~~~~ 42 (468)
|+++|+++-.+..| +.+|+.|++++++.+||+++.+.
T Consensus 1 m~~~vvIiG~G~AG-----~~~a~~lr~~~~~~~Itvi~~~~ 37 (377)
T PRK04965 1 MSNGIVIIGSGFAA-----RQLVKNIRKQDAHIPITLITADS 37 (377)
T ss_pred CCCCEEEECCcHHH-----HHHHHHHHhhCcCCCEEEEeCCC
Confidence 77889999887666 78999999988889999996544
No 192
>PRK06988 putative formyltransferase; Provisional
Probab=53.35 E-value=42 Score=32.03 Aligned_cols=35 Identities=17% Similarity=0.232 Sum_probs=24.8
Q ss_pred CcceEEEecCCCccCHHHHHHHHHHHHhCCCCcEEEEEeCCC
Q 044031 1 MKKTIALYPGPAFHHMISMVELGKLILQHRSDVSITILVPSM 42 (468)
Q Consensus 1 m~~~Iv~~~~~~~GHv~P~l~LA~~L~~~G~~h~Vt~~~~~~ 42 (468)
||++|+|+..+. -.+...+.|.++| |+|..+.+.+
T Consensus 1 ~~mkIvf~Gs~~-----~a~~~L~~L~~~~--~~i~~Vvt~~ 35 (312)
T PRK06988 1 MKPRAVVFAYHN-----VGVRCLQVLLARG--VDVALVVTHE 35 (312)
T ss_pred CCcEEEEEeCcH-----HHHHHHHHHHhCC--CCEEEEEcCC
Confidence 778999986554 3345566777889 9988776543
No 193
>COG0496 SurE Predicted acid phosphatase [General function prediction only]
Probab=52.98 E-value=34 Score=31.35 Aligned_cols=23 Identities=13% Similarity=0.349 Sum_probs=16.6
Q ss_pred HHHHHHHHHHhCCCCcEEEEEeCCCC
Q 044031 18 SMVELGKLILQHRSDVSITILVPSMP 43 (468)
Q Consensus 18 P~l~LA~~L~~~G~~h~Vt~~~~~~~ 43 (468)
=..+|++.|+ .+ ++|+++.++..
T Consensus 15 Gi~aL~~al~-~~--~dV~VVAP~~~ 37 (252)
T COG0496 15 GIRALARALR-EG--ADVTVVAPDRE 37 (252)
T ss_pred HHHHHHHHHh-hC--CCEEEEccCCC
Confidence 3456777777 88 99999965543
No 194
>PF02310 B12-binding: B12 binding domain; InterPro: IPR006158 The cobalamin (vitamin B12) binding domain can bind two different forms of the cobalamin cofactor, with cobalt bonded either to a methyl group (methylcobalamin) or to 5'-deoxyadenosine (adenosylcobalamin). Cobalamin-binding domains are mainly found in two families of enzymes present in animals and prokaryotes, which perform distinct kinds of reactions at the cobalt-carbon bond. Enzymes that require methylcobalamin carry out methyl transfer reactions. Enzymes that require adenosylcobalamin catalyse reactions in which the first step is the cleavage of adenosylcobalamin to form cob(II)alamin and the 5'-deoxyadenosyl radical, and thus act as radical generators. In both types of enzymes the B12-binding domain uses a histidine to bind the cobalt atom of cobalamin cofactors. This histidine is embedded in a DXHXXG sequence, the most conserved primary sequence motif of the domain [, , ]. Proteins containing the cobalamin-binding domain include: Animal and prokaryotic methionine synthase (2.1.1.13 from EC), which catalyse the transfer of a methyl group from methyl-cobalamin to homocysteine, yielding enzyme-bound cob(I)alamin and methionine. Animal and prokaryotic methylmalonyl-CoA mutase (5.4.99.2 from EC), which are involved in the degradation of several amino acids, odd-chain fatty acids and cholesterol via propionyl-CoA to the tricarboxylic acid cycle. Prokaryotic lysine 5,6-aminomutase (5.4.3.4 from EC). Prokaryotic glutamate mutase (5.4.99.1 from EC) []. Prokaryotic methyleneglutarate mutase (5.4.99.4 from EC). Prokaryotic isobutyryl-CoA mutase (5.4.99.13 from EC). The core structure of the cobalamin-binding domain is characterised by a five-stranded alpha/beta (Rossmann) fold, which consists of 5 parallel beta-sheets surrounded by 4-5 alpha helices in three layers (alpha/beta/alpha) []. Upon binding cobalamin, important elements of the binding site appear to become structured, including an alpha-helix that forms on one side of the cleft accommodating the nucleotide 'tail' of the cofactor. In cobalamin, the cobalt atom can be either free (dmb-off) or bound to dimethylbenzimidazole (dmb-on) according to the pH. When bound to the cobalamin-binding domain, the dimethylbenzimidazole ligand is replaced by the active histidine (His-on) of the DXHXXG motif. The replacement of dimethylbenzimidazole by histidine allows switching between the catalytic and activation cycles []. In methionine synthase the cobalamin cofactor is sandwiched between the cobalamin-binding domain and an approximately 90 residues N-terminal domain forming a helical bundle comprising two pairs of antiparallel helices []. In methionine synthase, there is a second, adjacent domain involved in cobalamin binding that forms a 4-helical bundle cap (IPR003759 from INTERPRO); in the conversion to the active conformation of this enzyme, the 4-helical cap rotates to allow the cobalamin cofactor to bind the activation domain (IPR004223 from INTERPRO) [].; GO: 0031419 cobalamin binding, 0046872 metal ion binding; PDB: 1Y80_A 3BUL_A 1K7Y_A 1BMT_A 3IV9_A 1K98_A 3IVA_A 3KP1_A 3KOW_A 3KOZ_A ....
Probab=51.93 E-value=32 Score=27.16 Aligned_cols=35 Identities=17% Similarity=0.196 Sum_probs=32.4
Q ss_pred eEEEecCCCccCHHHHHHHHHHHHhCCCCcEEEEEeC
Q 044031 4 TIALYPGPAFHHMISMVELGKLILQHRSDVSITILVP 40 (468)
Q Consensus 4 ~Iv~~~~~~~GHv~P~l~LA~~L~~~G~~h~Vt~~~~ 40 (468)
|+++.+.+..-|-.-+..+|..|.++| |+|.++..
T Consensus 2 ~v~~~~~~~~~~~lGl~~la~~l~~~G--~~v~~~d~ 36 (121)
T PF02310_consen 2 RVVLACVPGEVHPLGLLYLAAYLRKAG--HEVDILDA 36 (121)
T ss_dssp EEEEEEBTTSSTSHHHHHHHHHHHHTT--BEEEEEES
T ss_pred EEEEEeeCCcchhHHHHHHHHHHHHCC--CeEEEECC
Confidence 689999999999999999999999999 99999843
No 195
>COG0041 PurE Phosphoribosylcarboxyaminoimidazole (NCAIR) mutase [Nucleotide transport and metabolism]
Probab=51.67 E-value=1.4e+02 Score=24.94 Aligned_cols=143 Identities=21% Similarity=0.274 Sum_probs=78.8
Q ss_pred eEEeccCCCcCCCHHHHHHHHHHHHhCCCcEEEEEeCCCCccccCCChhHHhhccCCCeEecCCCCHHhhhCccCcceEE
Q 044031 272 VVFLCFGSRGTFSAPQLKEIAIGLERSNQRFLWVVRNPSNAAEAELPEGFLERTKERGLVVKSWAPQSTILGHESVGGFV 351 (468)
Q Consensus 272 ~v~vs~GS~~~~~~~~~~~~~~al~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~pq~~il~~~~~~~~i 351 (468)
.|-|-+||.+ +.+.+++.++.|+..+..+-..+-+. +.-|+.+. .|+... ....++++|
T Consensus 4 ~V~IIMGS~S--D~~~mk~Aa~~L~~fgi~ye~~VvSA-----HRTPe~m~-----------~ya~~a---~~~g~~viI 62 (162)
T COG0041 4 KVGIIMGSKS--DWDTMKKAAEILEEFGVPYEVRVVSA-----HRTPEKMF-----------EYAEEA---EERGVKVII 62 (162)
T ss_pred eEEEEecCcc--hHHHHHHHHHHHHHcCCCeEEEEEec-----cCCHHHHH-----------HHHHHH---HHCCCeEEE
Confidence 4667789986 56777889999999998764433332 34455332 111111 112333377
Q ss_pred ecCCcc----hHHHHHHhCCcEEeccccc---chhhHHHHHHhhcceeeeeccCCcccccCCCCccccHHHHHHHHHHHh
Q 044031 352 THCGWS----SVVEAVTYGVPMIAWPLYA---EQFLNSVALVQEMKVAMPMFLNGEEETIGNGEGVVSAERVEERVRELM 424 (468)
Q Consensus 352 thgG~~----s~~eal~~GvP~v~~P~~~---DQ~~na~~~~~~~g~g~~~~~~~~~~~~~~~~~~~~~~~l~~av~~~l 424 (468)
.-.|-- ++..|.. -+|+|++|... +-.+----++ ++-.|+.+-+- ..++. .++.-+...|-.+
T Consensus 63 AgAGgAAHLPGmvAa~T-~lPViGVPv~s~~L~GlDSL~SiV-QMP~GvPVaTv----aIg~a---~NAallAa~ILa~- 132 (162)
T COG0041 63 AGAGGAAHLPGMVAAKT-PLPVIGVPVQSKALSGLDSLLSIV-QMPAGVPVATV----AIGNA---ANAALLAAQILAI- 132 (162)
T ss_pred ecCcchhhcchhhhhcC-CCCeEeccCccccccchHHHHHHh-cCCCCCeeEEE----eecch---hhHHHHHHHHHcC-
Confidence 665532 2333333 68999999852 1111122233 34555544320 00111 3444455444332
Q ss_pred cCchhHHHHHHHHHHHHHHHHhhc
Q 044031 425 MGSEGKALRERSLEMRMMAATAWN 448 (468)
Q Consensus 425 ~~~~~~~~~~~a~~l~~~~~~a~~ 448 (468)
.|+ .++++..++++..++.+.
T Consensus 133 ~d~---~l~~kl~~~r~~~~~~V~ 153 (162)
T COG0041 133 KDP---ELAEKLAEFREAQTEEVL 153 (162)
T ss_pred CCH---HHHHHHHHHHHHHHHHHH
Confidence 477 799999999988888765
No 196
>PRK07710 acetolactate synthase catalytic subunit; Reviewed
Probab=50.40 E-value=46 Score=34.90 Aligned_cols=27 Identities=15% Similarity=0.399 Sum_probs=22.5
Q ss_pred cceEEecCCcc------hHHHHHHhCCcEEecc
Q 044031 347 VGGFVTHCGWS------SVVEAVTYGVPMIAWP 373 (468)
Q Consensus 347 ~~~~ithgG~~------s~~eal~~GvP~v~~P 373 (468)
.+++++|.|-| ++.||...++|+|++-
T Consensus 79 ~gv~~~t~GPG~~N~~~gl~~A~~~~~Pvl~It 111 (571)
T PRK07710 79 PGVVIATSGPGATNVVTGLADAMIDSLPLVVFT 111 (571)
T ss_pred CeEEEECCCccHHHHHHHHHHHhhcCCCEEEEe
Confidence 34488898877 6789999999999994
No 197
>PRK08322 acetolactate synthase; Reviewed
Probab=49.99 E-value=61 Score=33.73 Aligned_cols=28 Identities=29% Similarity=0.322 Sum_probs=23.0
Q ss_pred CcceEEecCCcc------hHHHHHHhCCcEEecc
Q 044031 346 SVGGFVTHCGWS------SVVEAVTYGVPMIAWP 373 (468)
Q Consensus 346 ~~~~~ithgG~~------s~~eal~~GvP~v~~P 373 (468)
..+++++|.|-| ++.+|...++|+|++-
T Consensus 63 ~~gv~~~t~GpG~~N~~~~i~~A~~~~~Pll~i~ 96 (547)
T PRK08322 63 KAGVCLSTLGPGATNLVTGVAYAQLGGMPMVAIT 96 (547)
T ss_pred CCEEEEECCCccHhHHHHHHHHHhhcCCCEEEEe
Confidence 344488888866 7899999999999995
No 198
>PRK14501 putative bifunctional trehalose-6-phosphate synthase/HAD hydrolase subfamily IIB; Provisional
Probab=49.99 E-value=46 Score=36.06 Aligned_cols=78 Identities=12% Similarity=-0.002 Sum_probs=46.7
Q ss_pred EecCCCCHHh---hhCccCcceEEec---CCcc-hHHHHHHhCCcEEecccccchhhHHHHHHhhcceeeeeccCCcccc
Q 044031 331 VVKSWAPQST---ILGHESVGGFVTH---CGWS-SVVEAVTYGVPMIAWPLYAEQFLNSVALVQEMKVAMPMFLNGEEET 403 (468)
Q Consensus 331 ~v~~~~pq~~---il~~~~~~~~ith---gG~~-s~~eal~~GvP~v~~P~~~DQ~~na~~~~~~~g~g~~~~~~~~~~~ 403 (468)
++.+++++.+ ++..+++ |+.- -|.| .+.|++++|+|-.++|...+----+..+ .-|+.+++
T Consensus 345 ~~~~~~~~~~l~~ly~~aDv--~v~~S~~EG~~lv~~Eama~~~~~~g~~vls~~~G~~~~l----~~~llv~P------ 412 (726)
T PRK14501 345 YFYRSLPFEELVALYRAADV--ALVTPLRDGMNLVAKEYVASRTDGDGVLILSEMAGAAAEL----AEALLVNP------ 412 (726)
T ss_pred EEeCCCCHHHHHHHHHhccE--EEecccccccCcccceEEEEcCCCCceEEEecccchhHHh----CcCeEECC------
Confidence 3546788775 4445555 5542 3544 7889999977532233222111111112 23777775
Q ss_pred cCCCCccccHHHHHHHHHHHhcCc
Q 044031 404 IGNGEGVVSAERVEERVRELMMGS 427 (468)
Q Consensus 404 ~~~~~~~~~~~~l~~av~~~l~~~ 427 (468)
.+.+.++++|.++|+.+
T Consensus 413 -------~d~~~la~ai~~~l~~~ 429 (726)
T PRK14501 413 -------NDIEGIAAAIKRALEMP 429 (726)
T ss_pred -------CCHHHHHHHHHHHHcCC
Confidence 57889999999999865
No 199
>cd01840 SGNH_hydrolase_yrhL_like yrhL-like subfamily of SGNH-hydrolases, a diverse family of lipases and esterases. The tertiary fold of the enzyme is substantially different from that of the alpha/beta hydrolase family and unique among all known hydrolases; its active site closely resembles the Ser-His-Asp(Glu) triad found in other serine hydrolases. Most members of this sub-family appear to co-occur with N-terminal acyltransferase domains. Might be involved in lipid metabolism.
Probab=49.58 E-value=40 Score=27.97 Aligned_cols=37 Identities=24% Similarity=0.411 Sum_probs=29.5
Q ss_pred CceEEeccCCCcCCCHHHHHHHHHHHHhCCCcEEEEEe
Q 044031 270 GSVVFLCFGSRGTFSAPQLKEIAIGLERSNQRFLWVVR 307 (468)
Q Consensus 270 ~~~v~vs~GS~~~~~~~~~~~~~~al~~~~~~~l~~~~ 307 (468)
..+|++.+||......+.+.++++.+. .+.+++++..
T Consensus 51 ~d~vvi~lGtNd~~~~~nl~~ii~~~~-~~~~ivlv~~ 87 (150)
T cd01840 51 RKTVVIGLGTNGPFTKDQLDELLDALG-PDRQVYLVNP 87 (150)
T ss_pred CCeEEEEecCCCCCCHHHHHHHHHHcC-CCCEEEEEEC
Confidence 349999999998888888999998885 3577777544
No 200
>cd03791 GT1_Glycogen_synthase_DULL1_like This family is most closely related to the GT1 family of glycosyltransferases. Glycogen synthase catalyzes the formation and elongation of the alpha-1,4-glucose backbone using ADP-glucose, the second and key step of glycogen biosynthesis. This family includes starch synthases of plants, such as DULL1 in Zea mays and glycogen synthases of various organisms.
Probab=49.39 E-value=1.1e+02 Score=30.86 Aligned_cols=23 Identities=13% Similarity=0.258 Sum_probs=19.1
Q ss_pred HHHHHHHHHhCCCCcEEEEEeCCCC
Q 044031 19 MVELGKLILQHRSDVSITILVPSMP 43 (468)
Q Consensus 19 ~l~LA~~L~~~G~~h~Vt~~~~~~~ 43 (468)
.-.|+++|+++| |+|+++++...
T Consensus 22 ~~~L~~aL~~~G--~~V~Vi~p~y~ 44 (476)
T cd03791 22 VGALPKALAKLG--HDVRVIMPKYG 44 (476)
T ss_pred HHHHHHHHHHCC--CeEEEEecCCc
Confidence 356999999999 99999986543
No 201
>TIGR02015 BchY chlorophyllide reductase subunit Y. This model represents the Y subunit of the three-subunit enzyme, (bacterio)chlorophyllide reductase. This enzyme is responsible for the reduction of the chlorin B-ring and is closely related to the protochlorophyllide reductase complex which reduces the D-ring. Both of these complexes in turn are homologous to nitrogenase.
Probab=49.23 E-value=99 Score=30.99 Aligned_cols=25 Identities=20% Similarity=0.141 Sum_probs=22.3
Q ss_pred CccEEEe-cCcHHHhhhCCCCeEEEe
Q 044031 108 KILSFII-TSTTSFSYHPNIPTYTYF 132 (468)
Q Consensus 108 ~pD~vI~-~~~~~vA~~lgIP~i~~~ 132 (468)
+||++|. +-...+|+++|||.+...
T Consensus 355 ~pDllig~s~~~~~A~k~gIP~vr~g 380 (422)
T TIGR02015 355 EPDLAIGTTPLVQFAKEHGIPALYFT 380 (422)
T ss_pred CCCEEEcCCcchHHHHHcCCCEEEec
Confidence 9999999 778889999999998754
No 202
>TIGR01162 purE phosphoribosylaminoimidazole carboxylase, PurE protein. Phosphoribosylaminoimidazole carboxylase is a fusion protein in plants and fungi, but consists of two non-interacting proteins in bacteria, PurK and PurE. This model represents PurK, an N5-CAIR mutase.
Probab=48.98 E-value=1.6e+02 Score=24.79 Aligned_cols=140 Identities=18% Similarity=0.178 Sum_probs=71.4
Q ss_pred eccCCCcCCCHHHHHHHHHHHHhCCCcEEEEEeCCCCccccCCChhHHhhccCCCeEecCCCCHHhhhCccCcceEEecC
Q 044031 275 LCFGSRGTFSAPQLKEIAIGLERSNQRFLWVVRNPSNAAEAELPEGFLERTKERGLVVKSWAPQSTILGHESVGGFVTHC 354 (468)
Q Consensus 275 vs~GS~~~~~~~~~~~~~~al~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~pq~~il~~~~~~~~ithg 354 (468)
|-+||.+ +.+..+++...|+..|.++=..+-+. +..|+.+. .|+.+.. -.+.. +||.=+
T Consensus 3 IimGS~S--D~~~~~~a~~~L~~~gi~~dv~V~Sa-----HRtp~~~~-----------~~~~~a~-~~g~~--viIa~A 61 (156)
T TIGR01162 3 IIMGSDS--DLPTMKKAADILEEFGIPYELRVVSA-----HRTPELML-----------EYAKEAE-ERGIK--VIIAGA 61 (156)
T ss_pred EEECcHh--hHHHHHHHHHHHHHcCCCeEEEEECc-----ccCHHHHH-----------HHHHHHH-HCCCe--EEEEeC
Confidence 4456664 56677888888988888764444433 34555433 2221111 01223 388888
Q ss_pred CcchHHHHHHh---CCcEEecccccc--hhhHHHHHHhhc--ceeeeeccCCcccccCCCCccccHHHHHHHHHHHhcCc
Q 044031 355 GWSSVVEAVTY---GVPMIAWPLYAE--QFLNSVALVQEM--KVAMPMFLNGEEETIGNGEGVVSAERVEERVRELMMGS 427 (468)
Q Consensus 355 G~~s~~eal~~---GvP~v~~P~~~D--Q~~na~~~~~~~--g~g~~~~~~~~~~~~~~~~~~~~~~~l~~av~~~l~~~ 427 (468)
|...-+-++.+ -+|+|++|.... .-.++-.-.-++ |+.+..-. =++..++..+...|-. +.|+
T Consensus 62 G~aa~Lpgvva~~t~~PVIgvP~~~~~l~G~daLlS~vqmP~gvpvatv~---------I~~~~nAa~~AaqIl~-~~d~ 131 (156)
T TIGR01162 62 GGAAHLPGMVAALTPLPVIGVPVPSKALSGLDSLLSIVQMPSGVPVATVA---------IGNAGNAALLAAQILG-IKDP 131 (156)
T ss_pred CccchhHHHHHhccCCCEEEecCCccCCCCHHHHHHHhcCCCCCeeEEEE---------cCChhHHHHHHHHHHc-CCCH
Confidence 86544444333 489999998431 112221111121 43222210 0112455555554433 2466
Q ss_pred hhHHHHHHHHHHHHHHHHhhc
Q 044031 428 EGKALRERSLEMRMMAATAWN 448 (468)
Q Consensus 428 ~~~~~~~~a~~l~~~~~~a~~ 448 (468)
+++++.+.+++..++.+.
T Consensus 132 ---~l~~kl~~~r~~~~~~v~ 149 (156)
T TIGR01162 132 ---ELAEKLKEYRENQKEEVL 149 (156)
T ss_pred ---HHHHHHHHHHHHHHHHHH
Confidence 677777777666665544
No 203
>PRK05920 aromatic acid decarboxylase; Validated
Probab=48.65 E-value=25 Score=31.19 Aligned_cols=39 Identities=21% Similarity=0.128 Sum_probs=31.4
Q ss_pred CcceEEEecCCCccCHHHHHHHHHHHHhCCCCcEEEEEeCCC
Q 044031 1 MKKTIALYPGPAFHHMISMVELGKLILQHRSDVSITILVPSM 42 (468)
Q Consensus 1 m~~~Iv~~~~~~~GHv~P~l~LA~~L~~~G~~h~Vt~~~~~~ 42 (468)
|++||++.-.|+-+= +=.+.+.++|.+.| ++|+++.+..
T Consensus 2 ~~krIllgITGsiaa-~ka~~lvr~L~~~g--~~V~vi~T~~ 40 (204)
T PRK05920 2 KMKRIVLAITGASGA-IYGVRLLECLLAAD--YEVHLVISKA 40 (204)
T ss_pred CCCEEEEEEeCHHHH-HHHHHHHHHHHHCC--CEEEEEEChh
Confidence 567888777665555 68999999999999 9999996544
No 204
>PF07355 GRDB: Glycine/sarcosine/betaine reductase selenoprotein B (GRDB); InterPro: IPR022787 This entry represents selenoprotein B of glycine reductase, sarcosine reductase, betaine reductase, D-proline reductase, and perhaps others. All members are expected to contain an internal UGA codon, encoding selenocysteine, which may be misinterpreted as a stop codon. ; GO: 0030699 glycine reductase activity, 0050485 oxidoreductase activity, acting on X-H and Y-H to form an X-Y bond, with a disulfide as acceptor, 0055114 oxidation-reduction process, 0030700 glycine reductase complex
Probab=48.45 E-value=21 Score=34.15 Aligned_cols=42 Identities=12% Similarity=0.124 Sum_probs=29.7
Q ss_pred HHHHhhHHHHHHHHhhhcCCCccEEEe--------------cCcHHHhhhCCCCeEEEec
Q 044031 88 SIKLNSSNVFQALENISLTSKILSFII--------------TSTTSFSYHPNIPTYTYFN 133 (468)
Q Consensus 88 ~~~~~~~~l~~ll~~~~~~~~pD~vI~--------------~~~~~vA~~lgIP~i~~~~ 133 (468)
..+.....+.++++++ +||++|+ .-+..+.++++||.+.-..
T Consensus 64 n~eea~~~i~~mv~~~----~pD~viaGPaFnagrYG~acg~v~~aV~e~~~IP~vtaM~ 119 (349)
T PF07355_consen 64 NKEEALKKILEMVKKL----KPDVVIAGPAFNAGRYGVACGEVAKAVQEKLGIPVVTAMY 119 (349)
T ss_pred CHHHHHHHHHHHHHhc----CCCEEEEcCCcCCchHHHHHHHHHHHHHHhhCCCEEEEec
Confidence 3444566677778887 9999999 1133366789999997544
No 205
>PF02951 GSH-S_N: Prokaryotic glutathione synthetase, N-terminal domain; InterPro: IPR004215 Prokaryotic glutathione synthetase 6.3.2.3 from EC (glutathione synthase) catalyses the conversion of gamma-L-glutamyl-L-cysteine and glycine to orthophosphate and glutathione in the presence of ATP. This is the second step in glutathione biosynthesis. The enzyme is inhibited by 7,8-dihydrofolate, methotrexate and trimethoprim. This domain is the N terminus of the enzyme.; GO: 0004363 glutathione synthase activity, 0006750 glutathione biosynthetic process; PDB: 1GLV_A 1GSA_A 1GSH_A 2GLT_A.
Probab=48.34 E-value=29 Score=27.83 Aligned_cols=36 Identities=14% Similarity=0.004 Sum_probs=25.0
Q ss_pred eEEEecCCCcc---CHHHHHHHHHHHHhCCCCcEEEEEeCC
Q 044031 4 TIALYPGPAFH---HMISMVELGKLILQHRSDVSITILVPS 41 (468)
Q Consensus 4 ~Iv~~~~~~~G---Hv~P~l~LA~~L~~~G~~h~Vt~~~~~ 41 (468)
+|+|+--|-.+ .-.-.++|+.+-++|| |+|.++...
T Consensus 2 ki~fvmDpi~~i~~~kDTT~alm~eAq~RG--hev~~~~~~ 40 (119)
T PF02951_consen 2 KIAFVMDPIESIKPYKDTTFALMLEAQRRG--HEVFYYEPG 40 (119)
T ss_dssp EEEEEES-GGG--TTT-HHHHHHHHHHHTT---EEEEE-GG
T ss_pred eEEEEeCCHHHCCCCCChHHHHHHHHHHCC--CEEEEEEcC
Confidence 37777777555 3356789999999999 999999543
No 206
>PRK08229 2-dehydropantoate 2-reductase; Provisional
Probab=48.09 E-value=17 Score=35.13 Aligned_cols=33 Identities=15% Similarity=0.175 Sum_probs=28.3
Q ss_pred CcceEEEecCCCccCHHHHHHHHHHHHhCCCCcEEEEEeC
Q 044031 1 MKKTIALYPGPAFHHMISMVELGKLILQHRSDVSITILVP 40 (468)
Q Consensus 1 m~~~Iv~~~~~~~GHv~P~l~LA~~L~~~G~~h~Vt~~~~ 40 (468)
|+++|.++-.|..|. .+|..|+++| |+|+++..
T Consensus 1 ~~mkI~IiG~G~mG~-----~~A~~L~~~G--~~V~~~~r 33 (341)
T PRK08229 1 MMARICVLGAGSIGC-----YLGGRLAAAG--ADVTLIGR 33 (341)
T ss_pred CCceEEEECCCHHHH-----HHHHHHHhcC--CcEEEEec
Confidence 778999998888775 6789999999 99999953
No 207
>PLN02948 phosphoribosylaminoimidazole carboxylase
Probab=47.95 E-value=2.9e+02 Score=29.04 Aligned_cols=145 Identities=15% Similarity=0.166 Sum_probs=75.2
Q ss_pred CceEEeccCCCcCCCHHHHHHHHHHHHhCCCcEEEEEeCCCCccccCCChhHHhhccCCCeEecCCCCHHhhhCccCcce
Q 044031 270 GSVVFLCFGSRGTFSAPQLKEIAIGLERSNQRFLWVVRNPSNAAEAELPEGFLERTKERGLVVKSWAPQSTILGHESVGG 349 (468)
Q Consensus 270 ~~~v~vs~GS~~~~~~~~~~~~~~al~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~pq~~il~~~~~~~ 349 (468)
.+.|-|-+||.+ +.....++...|+..|..+-..+-+. +..|+.+. .|+-+..- ..+++
T Consensus 410 ~~~v~i~~gs~s--d~~~~~~~~~~l~~~g~~~~~~v~sa-----hr~~~~~~-----------~~~~~~~~---~~~~v 468 (577)
T PLN02948 410 TPLVGIIMGSDS--DLPTMKDAAEILDSFGVPYEVTIVSA-----HRTPERMF-----------SYARSAHS---RGLQV 468 (577)
T ss_pred CCeEEEEECchh--hHHHHHHHHHHHHHcCCCeEEEEECC-----ccCHHHHH-----------HHHHHHHH---CCCCE
Confidence 345667777774 55667778888888887765554443 34554433 12211111 11233
Q ss_pred EEecCCcchHHHHHHh---CCcEEecccccc--hhhHHHHHHhhc--ceeeeeccCCcccccCCCCccccHHHHHHHHHH
Q 044031 350 FVTHCGWSSVVEAVTY---GVPMIAWPLYAE--QFLNSVALVQEM--KVAMPMFLNGEEETIGNGEGVVSAERVEERVRE 422 (468)
Q Consensus 350 ~ithgG~~s~~eal~~---GvP~v~~P~~~D--Q~~na~~~~~~~--g~g~~~~~~~~~~~~~~~~~~~~~~~l~~av~~ 422 (468)
||.-.|.-.-+-++.+ -+|+|++|.... -...+-.-.=++ |+.+..-. =++-.++.-++..|-.
T Consensus 469 ~i~~ag~~~~l~~~~a~~t~~pvi~vp~~~~~~~g~~~l~s~~~~p~g~pv~~v~---------i~~~~~aa~~a~~i~~ 539 (577)
T PLN02948 469 IIAGAGGAAHLPGMVASMTPLPVIGVPVKTSHLDGLDSLLSIVQMPRGVPVATVA---------IGNATNAGLLAVRMLG 539 (577)
T ss_pred EEEEcCccccchHHHhhccCCCEEEcCCCCCCCCcHHHHHHHhcCCCCCeEEEEe---------cCChHHHHHHHHHHHh
Confidence 8887776544444433 479999998432 122221111123 43222210 0112455555544422
Q ss_pred HhcCchhHHHHHHHHHHHHHHHHhhc
Q 044031 423 LMMGSEGKALRERSLEMRMMAATAWN 448 (468)
Q Consensus 423 ~l~~~~~~~~~~~a~~l~~~~~~a~~ 448 (468)
+.|+ +++++.+.+++.+++.+.
T Consensus 540 -~~~~---~~~~~~~~~~~~~~~~~~ 561 (577)
T PLN02948 540 -ASDP---DLLDKMEAYQEDMRDMVL 561 (577)
T ss_pred -cCCH---HHHHHHHHHHHHHHHHHH
Confidence 2466 677777777777766655
No 208
>PRK03708 ppnK inorganic polyphosphate/ATP-NAD kinase; Provisional
Probab=47.52 E-value=93 Score=29.14 Aligned_cols=28 Identities=11% Similarity=0.228 Sum_probs=22.7
Q ss_pred cceEEecCCcchHHHHHH---hCCcEEeccc
Q 044031 347 VGGFVTHCGWSSVVEAVT---YGVPMIAWPL 374 (468)
Q Consensus 347 ~~~~ithgG~~s~~eal~---~GvP~v~~P~ 374 (468)
++++|.-||-||+++++. .++|++++|.
T Consensus 58 ~d~vi~iGGDGTlL~a~~~~~~~~pi~gIn~ 88 (277)
T PRK03708 58 VDFIIAIGGDGTILRIEHKTKKDIPILGINM 88 (277)
T ss_pred CCEEEEEeCcHHHHHHHHhcCCCCeEEEEeC
Confidence 345999999999999984 3568888886
No 209
>COG3660 Predicted nucleoside-diphosphate-sugar epimerase [Cell envelope biogenesis, outer membrane]
Probab=47.40 E-value=2.4e+02 Score=26.21 Aligned_cols=92 Identities=18% Similarity=0.296 Sum_probs=56.4
Q ss_pred eEEeccCCCc--CCCHHHHHH----HHHHHHhCCCcEEEEEeCCCCccccCCChhHHh----hcc-CCCeEec----CCC
Q 044031 272 VVFLCFGSRG--TFSAPQLKE----IAIGLERSNQRFLWVVRNPSNAAEAELPEGFLE----RTK-ERGLVVK----SWA 336 (468)
Q Consensus 272 ~v~vs~GS~~--~~~~~~~~~----~~~al~~~~~~~l~~~~~~~~~~~~~~~~~~~~----~~~-~~~~~v~----~~~ 336 (468)
|.++-.|+.. .+..++... +.+.|++.|.+|+.+..-. -|+.... ++. .++++.- ++-
T Consensus 164 vAVlVGg~nk~f~~~~d~a~q~~~~l~k~l~~~g~~~lisfSRR-------Tp~~~~s~l~~~l~s~~~i~w~~~d~g~N 236 (329)
T COG3660 164 VAVLVGGNNKAFVFQEDKAHQFASLLVKILENQGGSFLISFSRR-------TPDTVKSILKNNLNSSPGIVWNNEDTGYN 236 (329)
T ss_pred EEEEecCCCCCCccCHHHHHHHHHHHHHHHHhCCceEEEEeecC-------CcHHHHHHHHhccccCceeEeCCCCCCCC
Confidence 4444456654 333443333 5666677888988877654 2333222 122 2333321 466
Q ss_pred CHHhhhCccCcceEEecCC-cchHHHHHHhCCcEEec
Q 044031 337 PQSTILGHESVGGFVTHCG-WSSVVEAVTYGVPMIAW 372 (468)
Q Consensus 337 pq~~il~~~~~~~~ithgG-~~s~~eal~~GvP~v~~ 372 (468)
|+.++|+.++. +|.-.. .|-..||.+.|+|+-+.
T Consensus 237 PY~~~La~Ady--ii~TaDSinM~sEAasTgkPv~~~ 271 (329)
T COG3660 237 PYIDMLAAADY--IISTADSINMCSEAASTGKPVFIL 271 (329)
T ss_pred chHHHHhhcce--EEEecchhhhhHHHhccCCCeEEE
Confidence 99999988877 665555 67789999999998664
No 210
>cd07037 TPP_PYR_MenD Pyrimidine (PYR) binding domain of 2-succinyl-5-enolpyruvyl-6-hydroxy-3-cyclohexadiene-1-carboxylate synthase (MenD) and related proteins. Thiamine pyrophosphate (TPP family), pyrimidine (PYR) binding domain of 2-succinyl-5-enolpyruvyl-6-hydroxy-3-cyclohexadiene-1-carboxylate (SEPHCHC) synthase (MenD) subfamily. The PYR domain is found in many key metabolic enzymes which use TPP (also known as thiamine diphosphate) as a cofactor. TPP binds in the cleft formed by a PYR domain and a PP domain. The PYR domain, binds the aminopyrimidine ring of TPP, the PP domain binds the diphosphate residue. The PYR and PP domains have a common fold, but do not share strong sequence conservation. The PP domain is not included in this sub-family. Most TPP-dependent enzymes have the PYR and PP domains on the same subunit although these domains can be alternatively arranged in the primary structure. TPP-dependent enzymes are multisubunit proteins, the smallest catalytic unit being a dim
Probab=47.07 E-value=48 Score=28.18 Aligned_cols=26 Identities=35% Similarity=0.488 Sum_probs=21.5
Q ss_pred eEEecCCcc------hHHHHHHhCCcEEeccc
Q 044031 349 GFVTHCGWS------SVVEAVTYGVPMIAWPL 374 (468)
Q Consensus 349 ~~ithgG~~------s~~eal~~GvP~v~~P~ 374 (468)
++++|+|-| ++.||...++|+|++.-
T Consensus 63 v~~~t~GpG~~n~~~gl~~A~~~~~Pvl~i~g 94 (162)
T cd07037 63 AVVCTSGTAVANLLPAVVEAYYSGVPLLVLTA 94 (162)
T ss_pred EEEECCchHHHHHhHHHHHHHhcCCCEEEEEC
Confidence 388888866 67899999999999953
No 211
>PF05225 HTH_psq: helix-turn-helix, Psq domain; InterPro: IPR007889 This DNA-binding motif is found in four copies in the pipsqueak protein of Drosophila melanogaster []. In pipsqueak this domain binds to GAGA sequence []. The pipsqueak family, which includes proteins from fungi, sea urchins, nematodes, insects, and vertebrates appear to be proteins essential for sequence-specific targeting of a polycomb group protein complex [].; GO: 0003677 DNA binding; PDB: 2COB_A.
Probab=47.01 E-value=38 Score=21.72 Aligned_cols=27 Identities=11% Similarity=0.299 Sum_probs=19.8
Q ss_pred cHHHHHHHHHHHhcCchhHHHHHHHHHHH
Q 044031 412 SAERVEERVRELMMGSEGKALRERSLEMR 440 (468)
Q Consensus 412 ~~~~l~~av~~~l~~~~~~~~~~~a~~l~ 440 (468)
|+++|.+||..+.++. .++++.|+.+.
T Consensus 1 tee~l~~Ai~~v~~g~--~S~r~AA~~yg 27 (45)
T PF05225_consen 1 TEEDLQKAIEAVKNGK--MSIRKAAKKYG 27 (45)
T ss_dssp -HHHHHHHHHHHHTTS--S-HHHHHHHHT
T ss_pred CHHHHHHHHHHHHhCC--CCHHHHHHHHC
Confidence 5789999999998763 37888887754
No 212
>TIGR00173 menD 2-succinyl-5-enolpyruvyl-6-hydroxy-3-cyclohexene-1-carboxylic-acid synthase. 2-oxoglutarate decarboxylase/SHCHC synthase (menD) is a thiamine pyrophosphate enzyme involved in menaquinone biosynthesis.
Probab=46.25 E-value=1.3e+02 Score=30.14 Aligned_cols=26 Identities=35% Similarity=0.450 Sum_probs=21.7
Q ss_pred cceEEecCCcc------hHHHHHHhCCcEEec
Q 044031 347 VGGFVTHCGWS------SVVEAVTYGVPMIAW 372 (468)
Q Consensus 347 ~~~~ithgG~~------s~~eal~~GvP~v~~ 372 (468)
.+++++|+|-| .++||...++|+|++
T Consensus 64 ~gv~~~t~GpG~~N~l~gl~~A~~~~~Pvl~i 95 (432)
T TIGR00173 64 PVAVVCTSGTAVANLLPAVIEASYSGVPLIVL 95 (432)
T ss_pred CEEEEECCcchHhhhhHHHHHhcccCCcEEEE
Confidence 33488888866 778999999999999
No 213
>cd07025 Peptidase_S66 LD-Carboxypeptidase, a serine protease, includes microcin C7 self immunity protein. LD-carboxypeptidase (Muramoyltetrapeptide carboxypeptidase; EC 3.4.17.13; Merops family S66; initially described as Carboxypeptidase II) family also includes the microcin c7 self-immunity protein (MccF) as well as uncharacterized proteins including hypothetical proteins. LD-carboxypeptidase hydrolyzes the amide bond that links the dibasic amino acids to C-terminal D-amino acids. The physiological substrates of LD-carboxypeptidase are tetrapeptide fragments (such as UDP-MurNAc-tetrapeptides) that are produced when bacterial cell walls are degraded; they contain an L-configured residue (L-lysine or meso-diaminopimelic acid residue) as the penultimate residue and D-alanine as the ultimate residue. A possible role of LD-carboxypeptidase is in peptidoglycan recycling whereby the resulting tripeptide (precursor for murein synthesis) can be reconverted into peptidoglycan by attachment o
Probab=44.78 E-value=49 Score=31.07 Aligned_cols=77 Identities=12% Similarity=0.194 Sum_probs=54.3
Q ss_pred cCCCHHHHHHHHHHHHhCCCcEEEEEeCCCCccccCCChhHHhhccCCCeEecCCCCHHhhhCccCcceEEecCCcchHH
Q 044031 281 GTFSAPQLKEIAIGLERSNQRFLWVVRNPSNAAEAELPEGFLERTKERGLVVKSWAPQSTILGHESVGGFVTHCGWSSVV 360 (468)
Q Consensus 281 ~~~~~~~~~~~~~al~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~pq~~il~~~~~~~~ithgG~~s~~ 360 (468)
...+.+...++.+++.+...+.||...++.. -..+.++++...+-.||.. ||=..-..++.
T Consensus 44 a~s~~~Ra~dL~~a~~d~~i~aI~~~rGG~g-----------------a~rlL~~ld~~~~~~~pK~--~iGySDiTaL~ 104 (282)
T cd07025 44 AGTDEERAADLNAAFADPEIKAIWCARGGYG-----------------ANRLLPYLDYDLIRANPKI--FVGYSDITALH 104 (282)
T ss_pred CCCHHHHHHHHHHHhhCCCCCEEEEcCCcCC-----------------HHHhhhhCCHHHHhhCCeE--EEEecHHHHHH
Confidence 3455677888999999999999999887611 0113366666666677776 87777777777
Q ss_pred HHHHh--CCcEEeccccc
Q 044031 361 EAVTY--GVPMIAWPLYA 376 (468)
Q Consensus 361 eal~~--GvP~v~~P~~~ 376 (468)
-+++. |++.+.=|...
T Consensus 105 ~~l~~~~g~~t~hGp~~~ 122 (282)
T cd07025 105 LALYAKTGLVTFHGPMLA 122 (282)
T ss_pred HHHHHhcCceEEECcccc
Confidence 77653 77777777643
No 214
>PRK13054 lipid kinase; Reviewed
Probab=44.76 E-value=2.3e+02 Score=26.67 Aligned_cols=40 Identities=10% Similarity=-0.098 Sum_probs=30.5
Q ss_pred CcceEEEecCCCccCHHHHHHHHHHHHhCCCCcEEEEEeCCC
Q 044031 1 MKKTIALYPGPAFHHMISMVELGKLILQHRSDVSITILVPSM 42 (468)
Q Consensus 1 m~~~Iv~~~~~~~GHv~P~l~LA~~L~~~G~~h~Vt~~~~~~ 42 (468)
||++++++-+|..|.-.-...+.+.|.++| +++.+..+..
T Consensus 2 ~~~~~~~i~N~~~~~~~~~~~~~~~l~~~g--~~~~v~~t~~ 41 (300)
T PRK13054 2 TFPKSLLILNGKSAGNEELREAVGLLREEG--HTLHVRVTWE 41 (300)
T ss_pred CCceEEEEECCCccchHHHHHHHHHHHHcC--CEEEEEEecC
Confidence 456888988888766666777788899999 8887765544
No 215
>COG2185 Sbm Methylmalonyl-CoA mutase, C-terminal domain/subunit (cobalamin-binding) [Lipid metabolism]
Probab=44.74 E-value=34 Score=28.31 Aligned_cols=37 Identities=5% Similarity=-0.085 Sum_probs=33.6
Q ss_pred cceEEEecCCCccCHHHHHHHHHHHHhCCCCcEEEEEeC
Q 044031 2 KKTIALYPGPAFHHMISMVELGKLILQHRSDVSITILVP 40 (468)
Q Consensus 2 ~~~Iv~~~~~~~GHv~P~l~LA~~L~~~G~~h~Vt~~~~ 40 (468)
+++|++.+.+..||=.-.--+++.|++.| .+|.....
T Consensus 12 rprvlvak~GlDgHd~gakvia~~l~d~G--feVi~~g~ 48 (143)
T COG2185 12 RPRVLVAKLGLDGHDRGAKVIARALADAG--FEVINLGL 48 (143)
T ss_pred CceEEEeccCccccccchHHHHHHHHhCC--ceEEecCC
Confidence 57999999999999999999999999999 99987744
No 216
>PF05693 Glycogen_syn: Glycogen synthase; InterPro: IPR008631 This family consists of the eukaryotic glycogen synthase proteins GYS1, GYS2 and GYS3. Glycogen synthase (GS) is the enzyme responsible for the synthesis of -1,4-linked glucose chains in glycogen. It is the rate limiting enzyme in the synthesis of the polysaccharide, and its activity is highly regulated through phosphorylation at multiple sites and also by allosteric effectors, mainly glucose 6-phosphate (G6P) [].; GO: 0004373 glycogen (starch) synthase activity, 0005978 glycogen biosynthetic process; PDB: 3NB0_C 3RT1_C 3RSZ_D 3O3C_B 3NAZ_B 3NCH_D.
Probab=44.02 E-value=48 Score=34.51 Aligned_cols=95 Identities=14% Similarity=0.200 Sum_probs=50.1
Q ss_pred CCHHhhhCccCcceEEecCC-cc-hHHHHHHhCCcEEeccccc-chhhHHHHH-HhhcceeeeeccCCcccccCCCCccc
Q 044031 336 APQSTILGHESVGGFVTHCG-WS-SVVEAVTYGVPMIAWPLYA-EQFLNSVAL-VQEMKVAMPMFLNGEEETIGNGEGVV 411 (468)
Q Consensus 336 ~pq~~il~~~~~~~~ithgG-~~-s~~eal~~GvP~v~~P~~~-DQ~~na~~~-~~~~g~g~~~~~~~~~~~~~~~~~~~ 411 (468)
+++.+++.-+++++|-+-== || |=+|++++|||.|.-=+.+ -++.+-..- ....|+-|.-+ .. -
T Consensus 461 l~Y~dfv~GcdLgvFPSYYEPWGYTPlE~~a~gVPsITTnLsGFG~~~~~~~~~~~~~GV~VvdR---------~~---~ 528 (633)
T PF05693_consen 461 LDYYDFVRGCDLGVFPSYYEPWGYTPLECTAFGVPSITTNLSGFGCWMQEHIEDPEEYGVYVVDR---------RD---K 528 (633)
T ss_dssp S-HHHHHHHSSEEEE--SSBSS-HHHHHHHHTT--EEEETTBHHHHHHHTTS-HHGGGTEEEE-S---------SS---S
T ss_pred CCHHHHhccCceeeeccccccccCChHHHhhcCCceeeccchhHHHHHHHhhccCcCCcEEEEeC---------CC---C
Confidence 46788888888877776322 44 8899999999999987743 222221100 11225554444 22 3
Q ss_pred cHHHHHHHHHHHh----c-Cc-hhHHHHHHHHHHHHH
Q 044031 412 SAERVEERVRELM----M-GS-EGKALRERSLEMRMM 442 (468)
Q Consensus 412 ~~~~l~~av~~~l----~-~~-~~~~~~~~a~~l~~~ 442 (468)
+.++..+.+.+.| . +. +....|++|+++++.
T Consensus 529 n~~e~v~~la~~l~~f~~~~~rqri~~Rn~ae~LS~~ 565 (633)
T PF05693_consen 529 NYDESVNQLADFLYKFCQLSRRQRIIQRNRAERLSDL 565 (633)
T ss_dssp -HHHHHHHHHHHHHHHHT--HHHHHHHHHHHHHHGGG
T ss_pred CHHHHHHHHHHHHHHHHhCCHHHHHHHHHHHHHHHHh
Confidence 4444444444444 2 22 256788888877764
No 217
>PF04127 DFP: DNA / pantothenate metabolism flavoprotein; InterPro: IPR007085 This entry represents the C-terminal domain found in DNA/pantothenate metabolism flavoproteins, which affects synthesis of DNA and pantothenate metabolism. These proteins contain ATP, phosphopantothenate, and cysteine binding sites. The structure of this domain has been determined in human phosphopantothenoylcysteine (PPC) synthetase [] and as the PPC synthase domain (CoaB) from the Escherichia coli coenzyme A bifunctional protein CoaBC []. This domain adopts a 3-layer alpha/beta/alpha fold with mixed beta-sheets, which topologically resembles a combination of Rossmann-like and ribokinase-like folds. The structure of these proteins predicts a ping pong mechanism with initial formation of an acyladenylate intermediate, followed by release of pyrophosphate and attack by cysteine to form the final products PPC and AMP. ; PDB: 1U7W_A 1U7U_A 1U80_C 1U7Z_A 1P9O_B 2GK4_A.
Probab=43.79 E-value=38 Score=29.55 Aligned_cols=29 Identities=10% Similarity=0.098 Sum_probs=19.5
Q ss_pred cCCCccCHHHHHHHHHHHHhCCCCcEEEEEeCC
Q 044031 9 PGPAFHHMISMVELGKLILQHRSDVSITILVPS 41 (468)
Q Consensus 9 ~~~~~GHv~P~l~LA~~L~~~G~~h~Vt~~~~~ 41 (468)
+..+.|.+ ...||+++..+| ++||++...
T Consensus 24 tN~SSG~~--G~~lA~~~~~~G--a~V~li~g~ 52 (185)
T PF04127_consen 24 TNRSSGKM--GAALAEEAARRG--AEVTLIHGP 52 (185)
T ss_dssp EES--SHH--HHHHHHHHHHTT---EEEEEE-T
T ss_pred cCCCcCHH--HHHHHHHHHHCC--CEEEEEecC
Confidence 33444433 578999999999 999999665
No 218
>PF02826 2-Hacid_dh_C: D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain; InterPro: IPR006140 A number of NAD-dependent 2-hydroxyacid dehydrogenases which seem to be specific for the D-isomer of their substrate have been shown to be functionally and structurally related. All contain a glycine-rich region located in the central section of these enzymes, this region corresponds to the NAD-binding domain. The catalytic domain is described in IPR006139 from INTERPRO ; GO: 0016616 oxidoreductase activity, acting on the CH-OH group of donors, NAD or NADP as acceptor, 0048037 cofactor binding, 0055114 oxidation-reduction process; PDB: 3JTM_A 3NAQ_B 3N7U_J 3KB6_B 3GG9_A 1QP8_B 2CUK_C 2W2L_D 2W2K_A 1WWK_A ....
Probab=43.16 E-value=1e+02 Score=26.49 Aligned_cols=104 Identities=19% Similarity=0.296 Sum_probs=65.3
Q ss_pred ceEEeccCCCcCCCHHHHHHHHHHHHhCCCcEEEEEeCCCCccccCCChh-HHhhccCCCeEecCCCCHHhhhCccCcce
Q 044031 271 SVVFLCFGSRGTFSAPQLKEIAIGLERSNQRFLWVVRNPSNAAEAELPEG-FLERTKERGLVVKSWAPQSTILGHESVGG 349 (468)
Q Consensus 271 ~~v~vs~GS~~~~~~~~~~~~~~al~~~~~~~l~~~~~~~~~~~~~~~~~-~~~~~~~~~~~v~~~~pq~~il~~~~~~~ 349 (468)
.+-.+++|..+ +++++.++..|.+++..-... . +.. +. ..+ + .+.+-.++|+.+++
T Consensus 38 tvgIiG~G~IG-------~~vA~~l~~fG~~V~~~d~~~-----~--~~~~~~----~~~--~-~~~~l~ell~~aDi-- 94 (178)
T PF02826_consen 38 TVGIIGYGRIG-------RAVARRLKAFGMRVIGYDRSP-----K--PEEGAD----EFG--V-EYVSLDELLAQADI-- 94 (178)
T ss_dssp EEEEESTSHHH-------HHHHHHHHHTT-EEEEEESSC-----H--HHHHHH----HTT--E-EESSHHHHHHH-SE--
T ss_pred EEEEEEEcCCc-------CeEeeeeecCCceeEEecccC-----C--hhhhcc----ccc--c-eeeehhhhcchhhh--
Confidence 38888999887 778888888999877654443 0 000 11 111 2 55678888998887
Q ss_pred EEecCCcchHHHHHHhCCcEEecccccchhhHHHHHHhhccee-eeeccCCcccccCCCCccccHHHHHHHHHH
Q 044031 350 FVTHCGWSSVVEAVTYGVPMIAWPLYAEQFLNSVALVQEMKVA-MPMFLNGEEETIGNGEGVVSAERVEERVRE 422 (468)
Q Consensus 350 ~ithgG~~s~~eal~~GvP~v~~P~~~DQ~~na~~~~~~~g~g-~~~~~~~~~~~~~~~~~~~~~~~l~~av~~ 422 (468)
++.|+-.+. ......|+..+. .++-| +.++. .+.+++..+.|.+++++
T Consensus 95 v~~~~plt~----------------~T~~li~~~~l~-~mk~ga~lvN~--------aRG~~vde~aL~~aL~~ 143 (178)
T PF02826_consen 95 VSLHLPLTP----------------ETRGLINAEFLA-KMKPGAVLVNV--------ARGELVDEDALLDALES 143 (178)
T ss_dssp EEE-SSSST----------------TTTTSBSHHHHH-TSTTTEEEEES--------SSGGGB-HHHHHHHHHT
T ss_pred hhhhhcccc----------------ccceeeeeeeee-ccccceEEEec--------cchhhhhhhHHHHHHhh
Confidence 776664221 135778888885 67766 55554 45677888888888763
No 219
>PRK14477 bifunctional nitrogenase molybdenum-cofactor biosynthesis protein NifE/NifN; Provisional
Probab=43.00 E-value=1.2e+02 Score=34.02 Aligned_cols=34 Identities=6% Similarity=0.050 Sum_probs=27.6
Q ss_pred HHHHHHHhhhcCCCccEEEe-cCcHHHhhhCCCCeEEEe
Q 044031 95 NVFQALENISLTSKILSFII-TSTTSFSYHPNIPTYTYF 132 (468)
Q Consensus 95 ~l~~ll~~~~~~~~pD~vI~-~~~~~vA~~lgIP~i~~~ 132 (468)
.+.+++++. +||++|. .-...+|+++|||.+...
T Consensus 380 el~~~i~~~----~pDLlig~~~~~~~a~k~giP~~~~~ 414 (917)
T PRK14477 380 GLLRVMREK----MPDLIVAGGKTKFLALKTRTPFLDIN 414 (917)
T ss_pred HHHHHHHhc----CCCEEEecCchhhHHHHcCCCeEEcc
Confidence 455667776 9999999 767889999999999644
No 220
>PRK05647 purN phosphoribosylglycinamide formyltransferase; Reviewed
Probab=42.84 E-value=2.4e+02 Score=24.92 Aligned_cols=90 Identities=12% Similarity=0.073 Sum_probs=46.8
Q ss_pred cceEEEecCCCccCHHHHHHHHHHHHhCCCCcEEEEEeCCCCCCchhhhhhhhccccCCCCCeeEEEcCCCCCCCCCCCh
Q 044031 2 KKTIALYPGPAFHHMISMVELGKLILQHRSDVSITILVPSMPLEESKTCSYINSISHRLNPIISFYYLPAIQMPSETLSR 81 (468)
Q Consensus 2 ~~~Iv~~~~~~~GHv~P~l~LA~~L~~~G~~h~Vt~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~i~~~~lp~~~~~~ 81 (468)
|++|+++..+..+-+. +|.+.+.+.+-.++|.++.+..+... ..+.. ...+|.+..++...++ +.
T Consensus 1 m~ki~vl~sg~gs~~~---~ll~~~~~~~~~~~I~~vvs~~~~~~--~~~~a------~~~gIp~~~~~~~~~~----~~ 65 (200)
T PRK05647 1 MKRIVVLASGNGSNLQ---AIIDACAAGQLPAEIVAVISDRPDAY--GLERA------EAAGIPTFVLDHKDFP----SR 65 (200)
T ss_pred CceEEEEEcCCChhHH---HHHHHHHcCCCCcEEEEEEecCccch--HHHHH------HHcCCCEEEECccccC----ch
Confidence 1579998877644444 55556666542377777654433221 11121 2236777665533121 00
Q ss_pred hHHHHHHHHHhhHHHHHHHHhhhcCCCccEEEe-cCcH
Q 044031 82 ADIAIESIKLNSSNVFQALENISLTSKILSFII-TSTT 118 (468)
Q Consensus 82 ~~~~~~~~~~~~~~l~~ll~~~~~~~~pD~vI~-~~~~ 118 (468)
....+.+.+.++.+ +||++|+ .|..
T Consensus 66 --------~~~~~~~~~~l~~~----~~D~iv~~~~~~ 91 (200)
T PRK05647 66 --------EAFDAALVEALDAY----QPDLVVLAGFMR 91 (200)
T ss_pred --------hHhHHHHHHHHHHh----CcCEEEhHHhhh
Confidence 11122345556666 9999998 4433
No 221
>PF07015 VirC1: VirC1 protein; InterPro: IPR009744 This family consists of several bacterial VirC1 proteins. In Agrobacterium tumefaciens, a cis-active 24-base-pair sequence adjacent to the right border of the T-DNA, called overdrive, stimulates tumour formation by increasing the level of T-DNA processing. It is thought that the virC operon, which enhances T-DNA processing probably, does so because the VirC1 protein interacts with overdrive. It has now been shown that the virC1 gene product binds to overdrive but not to the right border of T-DNA [].
Probab=42.79 E-value=1.2e+02 Score=27.38 Aligned_cols=43 Identities=5% Similarity=0.033 Sum_probs=34.8
Q ss_pred ceEEEecC-CCccCHHHHHHHHHHHHhCCCCcEEEEEeCCCCCCch
Q 044031 3 KTIALYPG-PAFHHMISMVELGKLILQHRSDVSITILVPSMPLEES 47 (468)
Q Consensus 3 ~~Iv~~~~-~~~GHv~P~l~LA~~L~~~G~~h~Vt~~~~~~~~~~~ 47 (468)
+-|.|++. |+.|-..-.+.||.+|+++| -.|+++-.++.....
T Consensus 2 ~vItf~s~KGGaGKTT~~~~LAs~la~~G--~~V~lIDaDpn~pl~ 45 (231)
T PF07015_consen 2 PVITFASSKGGAGKTTAAMALASELAARG--ARVALIDADPNQPLA 45 (231)
T ss_pred CeEEEecCCCCCcHHHHHHHHHHHHHHCC--CeEEEEeCCCCCcHH
Confidence 34566655 89999999999999999999 999999666655433
No 222
>PRK02231 ppnK inorganic polyphosphate/ATP-NAD kinase; Provisional
Probab=42.29 E-value=1.7e+02 Score=27.29 Aligned_cols=36 Identities=14% Similarity=0.208 Sum_probs=25.4
Q ss_pred CHHhhhCccCcceEEecCCcchHHHHHH----hCCcEEeccc
Q 044031 337 PQSTILGHESVGGFVTHCGWSSVVEAVT----YGVPMIAWPL 374 (468)
Q Consensus 337 pq~~il~~~~~~~~ithgG~~s~~eal~----~GvP~v~~P~ 374 (468)
++..+...+++ +|+=||=||++.+.+ .++|++++-.
T Consensus 35 ~~~~~~~~~d~--vi~iGGDGT~L~aa~~~~~~~~PilgIn~ 74 (272)
T PRK02231 35 SLEEIGQRAQL--AIVIGGDGNMLGRARVLAKYDIPLIGINR 74 (272)
T ss_pred ChHHhCcCCCE--EEEECCcHHHHHHHHHhccCCCcEEEEeC
Confidence 33444434454 999999999998865 3688888753
No 223
>PRK06276 acetolactate synthase catalytic subunit; Reviewed
Probab=41.73 E-value=1.1e+02 Score=32.34 Aligned_cols=27 Identities=30% Similarity=0.356 Sum_probs=22.5
Q ss_pred cceEEecCCcc------hHHHHHHhCCcEEecc
Q 044031 347 VGGFVTHCGWS------SVVEAVTYGVPMIAWP 373 (468)
Q Consensus 347 ~~~~ithgG~~------s~~eal~~GvP~v~~P 373 (468)
.+++++|.|-| ++.+|...++|+|++-
T Consensus 64 ~gv~~~t~GPG~~n~l~~i~~A~~~~~Pvl~I~ 96 (586)
T PRK06276 64 VGVCVATSGPGATNLVTGIATAYADSSPVIALT 96 (586)
T ss_pred CEEEEECCCccHHHHHHHHHHHHhcCCCEEEEe
Confidence 34488888866 7899999999999994
No 224
>cd02071 MM_CoA_mut_B12_BD methylmalonyl CoA mutase B12 binding domain. This domain binds to B12 (adenosylcobamide), which initiates the conversion of succinyl CoA and methylmalonyl CoA by forming an adenosyl radical, which then undergoes a rearrangement exchanging a hydrogen atom with a group attached to a neighboring carbon atom. This family is present in both mammals and bacteria. Bacterial members are heterodimers and involved in the fermentation of pyruvate to propionate. Mammalian members are homodimers and responsible for the conversion of odd-chain fatty acids and branched-chain amino acids via propionyl CoA to succinyl CoA for further degradation.
Probab=41.69 E-value=52 Score=26.33 Aligned_cols=40 Identities=8% Similarity=-0.098 Sum_probs=35.3
Q ss_pred eEEEecCCCccCHHHHHHHHHHHHhCCCCcEEEEEeCCCCCC
Q 044031 4 TIALYPGPAFHHMISMVELGKLILQHRSDVSITILVPSMPLE 45 (468)
Q Consensus 4 ~Iv~~~~~~~GHv~P~l~LA~~L~~~G~~h~Vt~~~~~~~~~ 45 (468)
||++.+.++-.|-.-..-++.-|..+| ++|.......+.+
T Consensus 1 ~vv~~~~~gd~H~lG~~~~~~~l~~~G--~~vi~lG~~vp~e 40 (122)
T cd02071 1 RILVAKPGLDGHDRGAKVIARALRDAG--FEVIYTGLRQTPE 40 (122)
T ss_pred CEEEEecCCChhHHHHHHHHHHHHHCC--CEEEECCCCCCHH
Confidence 589999999999999999999999999 9999997665443
No 225
>PRK04539 ppnK inorganic polyphosphate/ATP-NAD kinase; Provisional
Probab=41.39 E-value=67 Score=30.43 Aligned_cols=53 Identities=11% Similarity=0.158 Sum_probs=36.9
Q ss_pred cceEEecCCcchHHHHHH----hCCcEEecccccchhhHHHHHHhhcceeeeeccCCcccccCCCCccccHHHHHHHHHH
Q 044031 347 VGGFVTHCGWSSVVEAVT----YGVPMIAWPLYAEQFLNSVALVQEMKVAMPMFLNGEEETIGNGEGVVSAERVEERVRE 422 (468)
Q Consensus 347 ~~~~ithgG~~s~~eal~----~GvP~v~~P~~~DQ~~na~~~~~~~g~g~~~~~~~~~~~~~~~~~~~~~~~l~~av~~ 422 (468)
++++|+=||=||++.+.+ .++|++++=.. .+|...+ ++.+++.+++++
T Consensus 69 ~D~vi~lGGDGT~L~aa~~~~~~~~PilGIN~G--------------~lGFL~~--------------~~~~~~~~~l~~ 120 (296)
T PRK04539 69 CDLVAVLGGDGTFLSVAREIAPRAVPIIGINQG--------------HLGFLTQ--------------IPREYMTDKLLP 120 (296)
T ss_pred CCEEEEECCcHHHHHHHHHhcccCCCEEEEecC--------------CCeEeec--------------cCHHHHHHHHHH
Confidence 345999999999999975 37898888532 2344433 566677777777
Q ss_pred HhcCc
Q 044031 423 LMMGS 427 (468)
Q Consensus 423 ~l~~~ 427 (468)
++++.
T Consensus 121 i~~g~ 125 (296)
T PRK04539 121 VLEGK 125 (296)
T ss_pred HHcCC
Confidence 77653
No 226
>PLN02929 NADH kinase
Probab=41.11 E-value=49 Score=31.31 Aligned_cols=64 Identities=14% Similarity=0.210 Sum_probs=43.7
Q ss_pred ceEEecCCcchHHHHHH---hCCcEEeccccc------chhhHHHHHHhhcceeeeeccCCcccccCCCCccccHHHHHH
Q 044031 348 GGFVTHCGWSSVVEAVT---YGVPMIAWPLYA------EQFLNSVALVQEMKVAMPMFLNGEEETIGNGEGVVSAERVEE 418 (468)
Q Consensus 348 ~~~ithgG~~s~~eal~---~GvP~v~~P~~~------DQ~~na~~~~~~~g~g~~~~~~~~~~~~~~~~~~~~~~~l~~ 418 (468)
+++|+-||=||++.|.. .++|++++=..- .+++|.-.. ...+|.... ++.+++.+
T Consensus 66 Dlvi~lGGDGT~L~aa~~~~~~iPvlGIN~Gp~~~~~~~~~~~~~~~--~r~lGfL~~--------------~~~~~~~~ 129 (301)
T PLN02929 66 DLVVAVGGDGTLLQASHFLDDSIPVLGVNSDPTQKDEVEEYSDEFDA--RRSTGHLCA--------------ATAEDFEQ 129 (301)
T ss_pred CEEEEECCcHHHHHHHHHcCCCCcEEEEECCCccccccccccccccc--ccCcccccc--------------CCHHHHHH
Confidence 44999999999999855 478998886532 233333211 113555544 67889999
Q ss_pred HHHHHhcCc
Q 044031 419 RVRELMMGS 427 (468)
Q Consensus 419 av~~~l~~~ 427 (468)
++++++++.
T Consensus 130 ~L~~il~g~ 138 (301)
T PLN02929 130 VLDDVLFGR 138 (301)
T ss_pred HHHHHHcCC
Confidence 999999764
No 227
>TIGR01286 nifK nitrogenase molybdenum-iron protein beta chain. This model represents the majority of known sequences of the nitrogenase molybdenum-iron protein beta subunit. A distinct clade in a phylogenetic tree contains molybdenum-iron, vanadium-iron, and iron-iron forms of nitrogenase beta subunit and is excluded from this model. Nitrogenase, also called dinitrogenase, is responsible for nitrogen fixation. Note: the trusted cutoff score has recently been lowered to include an additional family in which the beta subunit is shorter by about 50 amino acids at the N-terminus. In species with the shorter form of the beta subunit, the alpha subunit has a novel insert of similar length.
Probab=41.09 E-value=1.8e+02 Score=30.00 Aligned_cols=33 Identities=6% Similarity=-0.067 Sum_probs=26.9
Q ss_pred HHHHHHHhhhcCCCccEEEe-cCcHHHhhhCCCCeEEE
Q 044031 95 NVFQALENISLTSKILSFII-TSTTSFSYHPNIPTYTY 131 (468)
Q Consensus 95 ~l~~ll~~~~~~~~pD~vI~-~~~~~vA~~lgIP~i~~ 131 (468)
.+++++... +||++|. +.+..+|+++|||.+-+
T Consensus 428 ~l~~~l~~~----~~DlliG~s~~k~~a~~~giPlir~ 461 (515)
T TIGR01286 428 HLRSLVFTE----PVDFLIGNSYGKYIQRDTLVPLIRI 461 (515)
T ss_pred HHHHHHhhc----CCCEEEECchHHHHHHHcCCCEEEe
Confidence 445566665 9999999 88889999999998754
No 228
>PRK03372 ppnK inorganic polyphosphate/ATP-NAD kinase; Provisional
Probab=41.01 E-value=64 Score=30.69 Aligned_cols=53 Identities=19% Similarity=0.210 Sum_probs=37.0
Q ss_pred cceEEecCCcchHHHHHHh----CCcEEecccccchhhHHHHHHhhcceeeeeccCCcccccCCCCccccHHHHHHHHHH
Q 044031 347 VGGFVTHCGWSSVVEAVTY----GVPMIAWPLYAEQFLNSVALVQEMKVAMPMFLNGEEETIGNGEGVVSAERVEERVRE 422 (468)
Q Consensus 347 ~~~~ithgG~~s~~eal~~----GvP~v~~P~~~DQ~~na~~~~~~~g~g~~~~~~~~~~~~~~~~~~~~~~~l~~av~~ 422 (468)
++++|+=||=||++.+... ++|++++... .+|...+ +..+++.+++++
T Consensus 73 ~D~vi~lGGDGT~L~aar~~~~~~~PilGIN~G--------------~lGFL~~--------------~~~~~~~~~l~~ 124 (306)
T PRK03372 73 CELVLVLGGDGTILRAAELARAADVPVLGVNLG--------------HVGFLAE--------------AEAEDLDEAVER 124 (306)
T ss_pred CCEEEEEcCCHHHHHHHHHhccCCCcEEEEecC--------------CCceecc--------------CCHHHHHHHHHH
Confidence 3459999999999998764 8899988652 2343333 455667777777
Q ss_pred HhcCc
Q 044031 423 LMMGS 427 (468)
Q Consensus 423 ~l~~~ 427 (468)
++++.
T Consensus 125 i~~g~ 129 (306)
T PRK03372 125 VVDRD 129 (306)
T ss_pred HHcCC
Confidence 77654
No 229
>TIGR01917 gly_red_sel_B glycine reductase, selenoprotein B. Glycine reductase is a complex with two selenoprotein subunits, A and B. This model represents the glycine reductase selenoprotein B. Closely related to it, but excluded from this model, are selenoprotein B subunits of betaine reductase and sarcosine reductase. All contain selenocysteine incorporated during translation at a specific UGA codon.
Probab=40.73 E-value=33 Score=33.83 Aligned_cols=45 Identities=16% Similarity=0.160 Sum_probs=31.0
Q ss_pred HHHHHHHhhHHHHHHHHhhhcCCCccEEEe--------------cCcHHHhhhCCCCeEEEec
Q 044031 85 AIESIKLNSSNVFQALENISLTSKILSFII--------------TSTTSFSYHPNIPTYTYFN 133 (468)
Q Consensus 85 ~~~~~~~~~~~l~~ll~~~~~~~~pD~vI~--------------~~~~~vA~~lgIP~i~~~~ 133 (468)
+....+.....+.++++++ +||++|+ .-+..+.+++|||.+.-..
T Consensus 57 f~en~eea~~~i~~mv~k~----~pDv~iaGPaFNagrYG~acg~va~aV~e~~~IP~vtaMy 115 (431)
T TIGR01917 57 FGENLEEAKAKVLEMIKGA----NPDIFIAGPAFNAGRYGMAAGAITKAVQDELGIKAFTAMY 115 (431)
T ss_pred hhhCHHHHHHHHHHHHHhc----CCCEEEEcCccCCccHHHHHHHHHHHHHHhhCCCeEEEec
Confidence 3333455566777788887 9999999 1123356779999997654
No 230
>TIGR01918 various_sel_PB selenoprotein B, glycine/betaine/sarcosine/D-proline reductase family. This model represents selenoprotein B of glycine reductase, sarcosine reductase, betaine reductase, D-proline reductase, and perhaps others. This model is built in fragment mode to assist in recognizing fragmentary translations. All members are expected to contain an internal TGA codon, encoding selenocysteine, which may be misinterpreted as a stop codon.
Probab=40.53 E-value=34 Score=33.78 Aligned_cols=45 Identities=22% Similarity=0.319 Sum_probs=29.5
Q ss_pred EEecCCcchHHHHHHhCCcEEeccccc--chhhHHHHHHhhcceeeeec
Q 044031 350 FVTHCGWSSVVEAVTYGVPMIAWPLYA--EQFLNSVALVQEMKVAMPMF 396 (468)
Q Consensus 350 ~ithgG~~s~~eal~~GvP~v~~P~~~--DQ~~na~~~~~~~g~g~~~~ 396 (468)
.=|+||+.-+-|-=.+|+|+|.+=-.- -+-.-|.|++. ++++.-.
T Consensus 348 tC~r~~a~m~keiE~~GiPvv~~~~~~pis~tvGanrivp--~~~ip~P 394 (431)
T TIGR01918 348 TCTRCGATMVKEIERAGIPVVHMCTVIPIALTVGANRIVP--TIAIPHP 394 (431)
T ss_pred cchhHHHHHHHHHHHcCCCEEEEeecccHhhhcCccceec--ccCcCCC
Confidence 457888888888888999999775321 23333667763 5555544
No 231
>COG0503 Apt Adenine/guanine phosphoribosyltransferases and related PRPP-binding proteins [Nucleotide transport and metabolism]
Probab=39.88 E-value=51 Score=28.56 Aligned_cols=24 Identities=8% Similarity=0.126 Sum_probs=21.7
Q ss_pred CccEEEe------cCcHHHhhhCCCCeEEE
Q 044031 108 KILSFII------TSTTSFSYHPNIPTYTY 131 (468)
Q Consensus 108 ~pD~vI~------~~~~~vA~~lgIP~i~~ 131 (468)
++|.|++ +.+..+|.+||+|++..
T Consensus 53 ~id~Iv~iea~Gi~~a~~vA~~Lgvp~v~v 82 (179)
T COG0503 53 GIDKIVTIEARGIPLAAAVALELGVPFVPV 82 (179)
T ss_pred CCCEEEEEccccchhHHHHHHHhCCCEEEE
Confidence 7999999 77888999999999975
No 232
>PRK01911 ppnK inorganic polyphosphate/ATP-NAD kinase; Provisional
Probab=39.87 E-value=69 Score=30.25 Aligned_cols=52 Identities=21% Similarity=0.333 Sum_probs=36.7
Q ss_pred ceEEecCCcchHHHHHH----hCCcEEecccccchhhHHHHHHhhcceeeeeccCCcccccCCCCccccHHHHHHHHHHH
Q 044031 348 GGFVTHCGWSSVVEAVT----YGVPMIAWPLYAEQFLNSVALVQEMKVAMPMFLNGEEETIGNGEGVVSAERVEERVREL 423 (468)
Q Consensus 348 ~~~ithgG~~s~~eal~----~GvP~v~~P~~~DQ~~na~~~~~~~g~g~~~~~~~~~~~~~~~~~~~~~~~l~~av~~~ 423 (468)
+++|+=||=||++.+.. .++|++++-.. .+|...+ ++.+++.++++++
T Consensus 66 dlvi~lGGDGT~L~aa~~~~~~~~PilGIN~G--------------~lGFLt~--------------~~~~~~~~~l~~i 117 (292)
T PRK01911 66 DMVISIGGDGTFLRTATYVGNSNIPILGINTG--------------RLGFLAT--------------VSKEEIEETIDEL 117 (292)
T ss_pred CEEEEECCcHHHHHHHHHhcCCCCCEEEEecC--------------CCCcccc--------------cCHHHHHHHHHHH
Confidence 34999999999999987 37888887542 1333332 5667777777777
Q ss_pred hcCc
Q 044031 424 MMGS 427 (468)
Q Consensus 424 l~~~ 427 (468)
+++.
T Consensus 118 ~~g~ 121 (292)
T PRK01911 118 LNGD 121 (292)
T ss_pred HcCC
Confidence 7654
No 233
>PRK12446 undecaprenyldiphospho-muramoylpentapeptide beta-N-acetylglucosaminyltransferase; Reviewed
Probab=39.47 E-value=44 Score=32.56 Aligned_cols=98 Identities=15% Similarity=0.129 Sum_probs=55.0
Q ss_pred eEEeccCCCcCCCHHHHHHHHHHHHhCCCcEEEEEeCCCCccccCCCh-hHHhh-ccCCCeE--------------ecCC
Q 044031 272 VVFLCFGSRGTFSAPQLKEIAIGLERSNQRFLWVVRNPSNAAEAELPE-GFLER-TKERGLV--------------VKSW 335 (468)
Q Consensus 272 ~v~vs~GS~~~~~~~~~~~~~~al~~~~~~~l~~~~~~~~~~~~~~~~-~~~~~-~~~~~~~--------------v~~~ 335 (468)
+++.+.||-+...+. ..+++.|++.+..++|+.....- +.+.+|. ++.-. ....++. +..+
T Consensus 4 i~~~~GGTGGHi~Pa--la~a~~l~~~g~~v~~vg~~~~~-e~~l~~~~g~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~ 80 (352)
T PRK12446 4 IVFTGGGSAGHVTPN--LAIIPYLKEDNWDISYIGSHQGI-EKTIIEKENIPYYSISSGKLRRYFDLKNIKDPFLVMKGV 80 (352)
T ss_pred EEEEcCCcHHHHHHH--HHHHHHHHhCCCEEEEEECCCcc-ccccCcccCCcEEEEeccCcCCCchHHHHHHHHHHHHHH
Confidence 788888888766554 45777777788999998755411 0111222 11100 0000100 0000
Q ss_pred CCHHhhhCccCcceEEecCCcch---HHHHHHhCCcEEec
Q 044031 336 APQSTILGHESVGGFVTHCGWSS---VVEAVTYGVPMIAW 372 (468)
Q Consensus 336 ~pq~~il~~~~~~~~ithgG~~s---~~eal~~GvP~v~~ 372 (468)
.--..++..-+-+++|++||.-| +..|...|+|++..
T Consensus 81 ~~~~~i~~~~kPdvvi~~Ggy~s~p~~~aa~~~~~p~~i~ 120 (352)
T PRK12446 81 MDAYVRIRKLKPDVIFSKGGFVSVPVVIGGWLNRVPVLLH 120 (352)
T ss_pred HHHHHHHHhcCCCEEEecCchhhHHHHHHHHHcCCCEEEE
Confidence 01112344333334999999997 89999999999874
No 234
>PRK01175 phosphoribosylformylglycinamidine synthase I; Provisional
Probab=39.19 E-value=2.8e+02 Score=25.69 Aligned_cols=36 Identities=11% Similarity=-0.115 Sum_probs=27.9
Q ss_pred CcceEEEecCCCccCHHHHHHHHHHHHhCCCCcEEEEEeCC
Q 044031 1 MKKTIALYPGPAFHHMISMVELGKLILQHRSDVSITILVPS 41 (468)
Q Consensus 1 m~~~Iv~~~~~~~GHv~P~l~LA~~L~~~G~~h~Vt~~~~~ 41 (468)
|+++|+++.+++...-. .+++.|.++| +++.++...
T Consensus 2 ~~~kvaVl~~pG~n~d~---e~~~Al~~aG--~~v~~v~~~ 37 (261)
T PRK01175 2 ESIRVAVLRMEGTNCED---ETVKAFRRLG--VEPEYVHIN 37 (261)
T ss_pred CCCEEEEEeCCCCCCHH---HHHHHHHHCC--CcEEEEeec
Confidence 46789999998776543 5678888899 999888543
No 235
>PRK13010 purU formyltetrahydrofolate deformylase; Reviewed
Probab=39.16 E-value=2.6e+02 Score=26.38 Aligned_cols=113 Identities=16% Similarity=0.098 Sum_probs=68.9
Q ss_pred HHHHHHHhCCCcEEEEEeCCCCccccCCChhHHhhccCCCeEecCCCCHHhhhCccCcceEEecCCcchHHHHHHhCCcE
Q 044031 290 EIAIGLERSNQRFLWVVRNPSNAAEAELPEGFLERTKERGLVVKSWAPQSTILGHESVGGFVTHCGWSSVVEAVTYGVPM 369 (468)
Q Consensus 290 ~~~~al~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~pq~~il~~~~~~~~ithgG~~s~~eal~~GvP~ 369 (468)
++.+.|+..+..+++..+.. ..+++.|......+. |=-||+. .=...|.+....|+.+|+..
T Consensus 160 ~~~~~l~~~~~Dlivlagym-----~il~~~~l~~~~~~i-----------iNiHpSl--LP~f~G~~~~~~ai~~G~k~ 221 (289)
T PRK13010 160 QILDLIETSGAELVVLARYM-----QVLSDDLSRKLSGRA-----------INIHHSF--LPGFKGARPYHQAHARGVKL 221 (289)
T ss_pred HHHHHHHHhCCCEEEEehhh-----hhCCHHHHhhccCCc-----------eeeCccc--CCCCCCCCHHHHHHHcCCCe
Confidence 46666777777777777654 446666654332211 1225555 55667999999999999999
Q ss_pred Eeccccc--chhhHHHHHHhhcceeeeeccCCcccccCCCCccccHHHHHHHHHHHhcCchhHHHHHHHHHH
Q 044031 370 IAWPLYA--EQFLNSVALVQEMKVAMPMFLNGEEETIGNGEGVVSAERVEERVRELMMGSEGKALRERSLEM 439 (468)
Q Consensus 370 v~~P~~~--DQ~~na~~~~~~~g~g~~~~~~~~~~~~~~~~~~~~~~~l~~av~~~l~~~~~~~~~~~a~~l 439 (468)
.++=.+. +..+....+. -.-+.+.. + -|.++|.+.+.++- .+-|-+..+.+
T Consensus 222 tG~TvH~v~~~lD~GpII~---Q~~v~V~~---------~---dt~e~L~~r~~~~E----~~~l~~ai~~~ 274 (289)
T PRK13010 222 IGATAHFVTDDLDEGPIIE---QDVERVDH---------S---YSPEDLVAKGRDVE----CLTLARAVKAF 274 (289)
T ss_pred EEEEEEEEcCCCCCCCceE---EEEEEcCC---------C---CCHHHHHHHHHHHH----HHHHHHHHHHH
Confidence 9888642 4445555453 23344442 2 47888888887752 22455544444
No 236
>cd01425 RPS2 Ribosomal protein S2 (RPS2), involved in formation of the translation initiation complex, where it might contact the messenger RNA and several components of the ribosome. It has been shown that in Escherichia coli RPS2 is essential for the binding of ribosomal protein S1 to the 30s ribosomal subunit. In humans, most likely in all vertebrates, and perhaps in all metazoans, the protein also functions as the 67 kDa laminin receptor (LAMR1 or 67LR), which is formed from a 37 kDa precursor, and is overexpressed in many tumors. 67LR is a cell surface receptor which interacts with a variety of ligands, laminin-1 and others. It is assumed that the ligand interactions are mediated via the conserved C-terminus, which becomes extracellular as the protein undergoes conformational changes which are not well understood. Specifically, a conserved palindromic motif, LMWWML, may participate in the interactions. 67LR plays essential roles in the adhesion of cells to the basement membrane an
Probab=39.01 E-value=80 Score=27.70 Aligned_cols=29 Identities=10% Similarity=0.033 Sum_probs=22.6
Q ss_pred CCccEEEe------cCcHHHhhhCCCCeEEEecch
Q 044031 107 SKILSFII------TSTTSFSYHPNIPTYTYFNSC 135 (468)
Q Consensus 107 ~~pD~vI~------~~~~~vA~~lgIP~i~~~~~~ 135 (468)
..||+||. ..+..=|.++|||.+.+.-+.
T Consensus 126 ~~Pdlviv~~~~~~~~ai~Ea~~l~IP~I~i~Dtn 160 (193)
T cd01425 126 RLPDLVIVLDPRKEHQAIREASKLGIPVIAIVDTN 160 (193)
T ss_pred cCCCEEEEeCCccchHHHHHHHHcCCCEEEEecCC
Confidence 58999999 345667888999999876544
No 237
>PRK04885 ppnK inorganic polyphosphate/ATP-NAD kinase; Provisional
Probab=39.00 E-value=60 Score=30.16 Aligned_cols=28 Identities=11% Similarity=0.034 Sum_probs=23.3
Q ss_pred cceEEecCCcchHHHHHH------hCCcEEeccc
Q 044031 347 VGGFVTHCGWSSVVEAVT------YGVPMIAWPL 374 (468)
Q Consensus 347 ~~~~ithgG~~s~~eal~------~GvP~v~~P~ 374 (468)
++++|+-||=||++.++. .++|++++-.
T Consensus 36 ~Dlvi~iGGDGT~L~a~~~~~~~~~~iPilGIN~ 69 (265)
T PRK04885 36 PDIVISVGGDGTLLSAFHRYENQLDKVRFVGVHT 69 (265)
T ss_pred CCEEEEECCcHHHHHHHHHhcccCCCCeEEEEeC
Confidence 345999999999999986 4889998864
No 238
>cd07035 TPP_PYR_POX_like Pyrimidine (PYR) binding domain of POX and related proteins. Thiamine pyrophosphate (TPP family), pyrimidine (PYR) binding domain of pyruvate oxidase (POX) and related protiens subfamily. The PYR domain is found in many key metabolic enzymes which use TPP (also known as thiamine diphosphate) as a cofactor. TPP binds in the cleft formed by a PYR domain and a PP domain. The PYR domain, binds the aminopyrimidine ring of TPP, the PP domain binds the diphosphate residue. A polar interaction between the conserved glutamate of the PYR domain and the N1' of the TPP aminopyrimidine ring is shared by most TPP-dependent enzymes, and participates in the activation of TPP. For glyoxylate carboligase, which belongs to this subfamily, but lacks this conserved glutamate, the rate of the initial TPP activation step is reduced but the ensuing steps of the enzymic reaction proceed efficiently. The PYR and PP domains have a common fold, but do not share strong sequence conservatio
Probab=38.88 E-value=2.2e+02 Score=23.48 Aligned_cols=26 Identities=12% Similarity=0.149 Sum_probs=21.3
Q ss_pred eEEecCCcc------hHHHHHHhCCcEEeccc
Q 044031 349 GFVTHCGWS------SVVEAVTYGVPMIAWPL 374 (468)
Q Consensus 349 ~~ithgG~~------s~~eal~~GvP~v~~P~ 374 (468)
++++|+|-| .+.+|...++|+|++.-
T Consensus 62 v~~~~~gpG~~n~~~~l~~A~~~~~Pll~i~~ 93 (155)
T cd07035 62 VVLVTSGPGLTNAVTGLANAYLDSIPLLVITG 93 (155)
T ss_pred EEEEcCCCcHHHHHHHHHHHHhhCCCEEEEeC
Confidence 488887765 77889999999999964
No 239
>PF10649 DUF2478: Protein of unknown function (DUF2478); InterPro: IPR018912 This is a family of hypothetical bacterial proteins encoded in the vicinity of molybdenum ABC transporter gene-products MobA, MobB and MobC. However the function could not be confirmed.
Probab=38.51 E-value=2.5e+02 Score=23.84 Aligned_cols=34 Identities=12% Similarity=0.010 Sum_probs=24.3
Q ss_pred EEecCCCccCHHHHH-HHHHHHHhCCCCcEEEEEeCC
Q 044031 6 ALYPGPAFHHMISMV-ELGKLILQHRSDVSITILVPS 41 (468)
Q Consensus 6 v~~~~~~~GHv~P~l-~LA~~L~~~G~~h~Vt~~~~~ 41 (468)
+.+.+...+.+..+| .+|++|.++| ++|.=+...
T Consensus 2 aav~~~~~~~~d~lL~~~a~~L~~~G--~rv~G~vQ~ 36 (159)
T PF10649_consen 2 AAVVYDDGGDIDALLAAFAARLRARG--VRVAGLVQR 36 (159)
T ss_pred EEEEcCCCCCHHHHHHHHHHHHHhCC--CeEEEEecc
Confidence 445556667777665 6999999999 887766443
No 240
>PRK13011 formyltetrahydrofolate deformylase; Reviewed
Probab=38.36 E-value=3e+02 Score=25.94 Aligned_cols=114 Identities=16% Similarity=0.088 Sum_probs=69.4
Q ss_pred HHHHHHHhCCCcEEEEEeCCCCccccCCChhHHhhccCCCeEecCCCCHHhhhCccCcceEEecCCcchHHHHHHhCCcE
Q 044031 290 EIAIGLERSNQRFLWVVRNPSNAAEAELPEGFLERTKERGLVVKSWAPQSTILGHESVGGFVTHCGWSSVVEAVTYGVPM 369 (468)
Q Consensus 290 ~~~~al~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~pq~~il~~~~~~~~ithgG~~s~~eal~~GvP~ 369 (468)
++.+.|+..+..+++..+.. ..+++.|.+....+ -+=-||+. .=.+.|.+.+..|+.+|+..
T Consensus 156 ~~~~~l~~~~~Dlivlagy~-----~il~~~~l~~~~~~-----------iiNiHpSL--LP~~rG~~~~~~ai~~G~~~ 217 (286)
T PRK13011 156 QVLDVVEESGAELVVLARYM-----QVLSPELCRKLAGR-----------AINIHHSF--LPGFKGAKPYHQAYERGVKL 217 (286)
T ss_pred HHHHHHHHhCcCEEEEeChh-----hhCCHHHHhhccCC-----------eEEecccc--CCCCCCCcHHHHHHHCCCCe
Confidence 35666666677777776654 44666665433221 11236666 66778999999999999999
Q ss_pred Eeccccc--chhhHHHHHHhhcceeeeeccCCcccccCCCCccccHHHHHHHHHHHhcCchhHHHHHHHHHHH
Q 044031 370 IAWPLYA--EQFLNSVALVQEMKVAMPMFLNGEEETIGNGEGVVSAERVEERVRELMMGSEGKALRERSLEMR 440 (468)
Q Consensus 370 v~~P~~~--DQ~~na~~~~~~~g~g~~~~~~~~~~~~~~~~~~~~~~~l~~av~~~l~~~~~~~~~~~a~~l~ 440 (468)
.++=.+. +..+-...+. -..+.+.. + -|.++|.+.+.++ |.+-|-+..+.+.
T Consensus 218 tG~TvH~v~~~~D~G~Ii~---Q~~v~I~~---------~---dt~~~L~~r~~~~----E~~~~~~ai~~~~ 271 (286)
T PRK13011 218 IGATAHYVTDDLDEGPIIE---QDVERVDH---------A---YSPEDLVAKGRDV----ECLTLARAVKAHI 271 (286)
T ss_pred EEEEEEEEcCCCcCCCcEE---EEEEEcCC---------C---CCHHHHHHHHHHH----HHHHHHHHHHHHH
Confidence 8887642 3333333332 23344442 2 4888999888775 2335555555444
No 241
>TIGR00655 PurU formyltetrahydrofolate deformylase. This model describes formyltetrahydrofolate deformylases. The enzyme is a homohexamer. Sequences from a related enzyme formyl tetrahydrofolate-specific enzyme, phosphoribosylglycinamide formyltransferase, serve as an outgroup for phylogenetic analysis. Putative members of this family, scoring below the trusted cutoff, include a sequence from Rhodobacter capsulatus that lacks an otherwise conserved C-terminal region.
Probab=37.49 E-value=2.8e+02 Score=26.05 Aligned_cols=115 Identities=16% Similarity=0.100 Sum_probs=70.4
Q ss_pred HHHHHHHHhCCCcEEEEEeCCCCccccCCChhHHhhccCCCeEecCCCCHHhhhCccCcceEEecCCcchHHHHHHhCCc
Q 044031 289 KEIAIGLERSNQRFLWVVRNPSNAAEAELPEGFLERTKERGLVVKSWAPQSTILGHESVGGFVTHCGWSSVVEAVTYGVP 368 (468)
Q Consensus 289 ~~~~~al~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~pq~~il~~~~~~~~ithgG~~s~~eal~~GvP 368 (468)
.++++.|+..+..+++..+.. ..+++.|.+....+ + +=-||+. .=...|.+.+..|+.+|+.
T Consensus 150 ~~~~~~l~~~~~Dlivlagym-----~il~~~~l~~~~~~--i---------INiHpSL--LP~f~G~~p~~~ai~~G~k 211 (280)
T TIGR00655 150 KRQLELLKQYQVDLVVLAKYM-----QILSPDFVKRYPNK--I---------INIHHSF--LPAFIGANPYQRAYERGVK 211 (280)
T ss_pred HHHHHHHHHhCCCEEEEeCch-----hhCCHHHHhhccCC--E---------EEecCCc--CCCCCCcCHHHHHHHcCCC
Confidence 346777777777887777764 45666665433221 1 1225555 5556799999999999999
Q ss_pred EEecccc--cchhhHHHHHHhhcceeeeeccCCcccccCCCCccccHHHHHHHHHHHhcCchhHHHHHHHHHHH
Q 044031 369 MIAWPLY--AEQFLNSVALVQEMKVAMPMFLNGEEETIGNGEGVVSAERVEERVRELMMGSEGKALRERSLEMR 440 (468)
Q Consensus 369 ~v~~P~~--~DQ~~na~~~~~~~g~g~~~~~~~~~~~~~~~~~~~~~~~l~~av~~~l~~~~~~~~~~~a~~l~ 440 (468)
..++=.+ .+..+....+. -.-+.+.. + -|.++|.+.+.++ |.+-|-+..+.+.
T Consensus 212 ~tG~TvH~V~e~lD~GpII~---Q~~v~I~~---------~---dt~~~L~~ri~~~----E~~~~~~ai~~~~ 266 (280)
T TIGR00655 212 IIGATAHYVTEELDEGPIIE---QDVVRVDH---------T---DNVEDLIRAGRDI----EKVVLARAVKLHL 266 (280)
T ss_pred eEEEEEEEEcCCCcCCCeEE---EEEEEcCC---------C---CCHHHHHHHHHHH----HHHHHHHHHHHHH
Confidence 9888764 24444444443 22334432 2 5888888888765 3334555544443
No 242
>PTZ00445 p36-lilke protein; Provisional
Probab=37.48 E-value=78 Score=28.22 Aligned_cols=28 Identities=18% Similarity=0.235 Sum_probs=23.7
Q ss_pred cCHHH-HHHHHHHHHhCCCCcEEEEEeCCCC
Q 044031 14 HHMIS-MVELGKLILQHRSDVSITILVPSMP 43 (468)
Q Consensus 14 GHv~P-~l~LA~~L~~~G~~h~Vt~~~~~~~ 43 (468)
+|+.| +..+.++|.++| ..|+++|.+..
T Consensus 74 ~~~tpefk~~~~~l~~~~--I~v~VVTfSd~ 102 (219)
T PTZ00445 74 TSVTPDFKILGKRLKNSN--IKISVVTFSDK 102 (219)
T ss_pred ccCCHHHHHHHHHHHHCC--CeEEEEEccch
Confidence 46677 889999999999 99999987654
No 243
>cd01635 Glycosyltransferase_GTB_type Glycosyltransferases catalyze the transfer of sugar moieties from activated donor molecules to specific acceptor molecules, forming glycosidic bonds. The acceptor molecule can be a lipid, a protein, a heterocyclic compound, or another carbohydrate residue. The structures of the formed glycoconjugates are extremely diverse, reflecting a wide range of biological functions. The members of this family share a common GTB topology, one of the two protein topologies observed for nucleotide-sugar-dependent glycosyltransferases. GTB proteins have distinct N- and C- terminal domains each containing a typical Rossmann fold. The two domains have high structural homology despite minimal sequence homology. The large cleft that separates the two domains includes the catalytic center and permits a high degree of flexibility.
Probab=37.22 E-value=47 Score=28.96 Aligned_cols=26 Identities=8% Similarity=0.187 Sum_probs=24.4
Q ss_pred CccCHHHHHHHHHHHHhCCCCcEEEEEe
Q 044031 12 AFHHMISMVELGKLILQHRSDVSITILV 39 (468)
Q Consensus 12 ~~GHv~P~l~LA~~L~~~G~~h~Vt~~~ 39 (468)
..|+-.....|++.|.++| |+|+++.
T Consensus 12 ~~G~~~~~~~l~~~L~~~g--~~v~v~~ 37 (229)
T cd01635 12 GGGVELVLLDLAKALARRG--HEVEVVA 37 (229)
T ss_pred CCCchhHHHHHHHHHHHcC--CeEEEEE
Confidence 6799999999999999999 9999984
No 244
>cd07062 Peptidase_S66_mccF_like Microcin C7 self-immunity protein determines resistance to exogenous microcin C7. Microcin C7 self-immunity protein (mccF): MccF, a homolog of the LD-carboxypeptidase family, mediates resistance against exogenously added microcin C7 (MccC7), a ribosomally-encoded peptide antibiotic that contains a phosphoramidate linkage to adenosine monophosphate at its C-terminus. The plasmid-encoded mccF gene is transcribed in the opposite direction to the other five genes (mccA-E) and is required for the full expression of immunity but not for production. The catalytic triad residues (Ser, His, Glu) of LD-carboxypeptidase are also conserved in MccF, strongly suggesting that MccF shares the hydrolytic activity with LD-carboxypeptidases. Substrates of MccF have not been deduced, but could likely be microcin C7 precursors. The possible role of MccF is to defend producer cells against exogenous microcin from re-entering after having been exported. It is suggested that M
Probab=36.97 E-value=67 Score=30.62 Aligned_cols=75 Identities=8% Similarity=0.066 Sum_probs=51.6
Q ss_pred CCCHHHHHHHHHHHHhCCCcEEEEEeCCCCccccCCChhHHhhccCCCeEecCCCCHHhhhCccCcceEEecCCcchHHH
Q 044031 282 TFSAPQLKEIAIGLERSNQRFLWVVRNPSNAAEAELPEGFLERTKERGLVVKSWAPQSTILGHESVGGFVTHCGWSSVVE 361 (468)
Q Consensus 282 ~~~~~~~~~~~~al~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~pq~~il~~~~~~~~ithgG~~s~~e 361 (468)
..+.+...++.+++.+...+.||.+.++.. -..+.++++...+-.||.. ||=..-..++.-
T Consensus 49 g~~~~Ra~dL~~a~~Dp~i~aI~~~rGG~g-----------------~~rlL~~lD~~~i~~~PK~--fiGySDiTaL~~ 109 (308)
T cd07062 49 ASPEERAEELMAAFADPSIKAIIPTIGGDD-----------------SNELLPYLDYELIKKNPKI--FIGYSDITALHL 109 (308)
T ss_pred CCHHHHHHHHHHHhcCCCCCEEEECCcccC-----------------HhhhhhhcCHHHHhhCCCE--EEeccHHHHHHH
Confidence 445677888999999999999999887611 1113366666666667766 777777667777
Q ss_pred HHH--hCCcEEecccc
Q 044031 362 AVT--YGVPMIAWPLY 375 (468)
Q Consensus 362 al~--~GvP~v~~P~~ 375 (468)
+++ .|.+.+.-|..
T Consensus 110 al~~~~g~~t~hGp~~ 125 (308)
T cd07062 110 AIYKKTGLVTYYGPNL 125 (308)
T ss_pred HHHHhcCCeEEECccc
Confidence 763 36777666664
No 245
>PRK14077 pnk inorganic polyphosphate/ATP-NAD kinase; Provisional
Probab=36.70 E-value=80 Score=29.76 Aligned_cols=27 Identities=7% Similarity=0.099 Sum_probs=21.7
Q ss_pred ceEEecCCcchHHHHHH----hCCcEEeccc
Q 044031 348 GGFVTHCGWSSVVEAVT----YGVPMIAWPL 374 (468)
Q Consensus 348 ~~~ithgG~~s~~eal~----~GvP~v~~P~ 374 (468)
+++|+-||=||++.+.. .++|++++-.
T Consensus 66 Dlvi~iGGDGT~L~aa~~~~~~~~PilGIN~ 96 (287)
T PRK14077 66 DFLISLGGDGTLISLCRKAAEYDKFVLGIHA 96 (287)
T ss_pred CEEEEECCCHHHHHHHHHhcCCCCcEEEEeC
Confidence 44999999999998866 3788888754
No 246
>PRK12475 thiamine/molybdopterin biosynthesis MoeB-like protein; Provisional
Probab=36.48 E-value=1.3e+02 Score=29.11 Aligned_cols=30 Identities=13% Similarity=0.192 Sum_probs=24.5
Q ss_pred ceEEEecCCCccCHHHHHHHHHHHHhCCCCc-EEEEEe
Q 044031 3 KTIALYPGPAFHHMISMVELGKLILQHRSDV-SITILV 39 (468)
Q Consensus 3 ~~Iv~~~~~~~GHv~P~l~LA~~L~~~G~~h-~Vt~~~ 39 (468)
.||+++-.++.| -.+|+.|+..| + +++++-
T Consensus 25 ~~VlIiG~GglG-----s~va~~La~aG--vg~i~lvD 55 (338)
T PRK12475 25 KHVLIVGAGALG-----AANAEALVRAG--IGKLTIAD 55 (338)
T ss_pred CcEEEECCCHHH-----HHHHHHHHHcC--CCEEEEEc
Confidence 578888888776 67899999999 8 788773
No 247
>PRK09219 xanthine phosphoribosyltransferase; Validated
Probab=36.15 E-value=51 Score=28.85 Aligned_cols=26 Identities=8% Similarity=0.052 Sum_probs=21.9
Q ss_pred CccEEEe------cCcHHHhhhCCCCeEEEec
Q 044031 108 KILSFII------TSTTSFSYHPNIPTYTYFN 133 (468)
Q Consensus 108 ~pD~vI~------~~~~~vA~~lgIP~i~~~~ 133 (468)
++|+|++ +.+..+|.++|+|.+...-
T Consensus 50 ~~D~Ivg~e~~GiplA~~lA~~Lg~p~v~vRK 81 (189)
T PRK09219 50 GITKILTIEASGIAPAVMAALALGVPVVFAKK 81 (189)
T ss_pred CCCEEEEEccccHHHHHHHHHHHCCCEEEEEE
Confidence 8999999 6677799999999987644
No 248
>PF02374 ArsA_ATPase: Anion-transporting ATPase; PDB: 2WOO_A 3IBG_B 3SJA_A 3H84_B 3SJD_A 3ZS9_A 3A37_A 2WOJ_A 3SJC_B 3A36_B ....
Probab=36.13 E-value=55 Score=31.13 Aligned_cols=39 Identities=8% Similarity=0.094 Sum_probs=33.3
Q ss_pred EEEecC-CCccCHHHHHHHHHHHHhCCCCcEEEEEeCCCCCC
Q 044031 5 IALYPG-PAFHHMISMVELGKLILQHRSDVSITILVPSMPLE 45 (468)
Q Consensus 5 Iv~~~~-~~~GHv~P~l~LA~~L~~~G~~h~Vt~~~~~~~~~ 45 (468)
++|+.. |+-|-..-..++|-.++++| ++|.++++++.+.
T Consensus 3 ~~~~~GKGGVGKTT~aaA~A~~~A~~G--~rtLlvS~Dpa~~ 42 (305)
T PF02374_consen 3 ILFFGGKGGVGKTTVAAALALALARRG--KRTLLVSTDPAHS 42 (305)
T ss_dssp EEEEEESTTSSHHHHHHHHHHHHHHTT--S-EEEEESSTTTH
T ss_pred EEEEecCCCCCcHHHHHHHHHHHhhCC--CCeeEeecCCCcc
Confidence 666666 89999999999999999999 9999999887665
No 249
>PRK14075 pnk inorganic polyphosphate/ATP-NAD kinase; Provisional
Probab=35.96 E-value=80 Score=29.17 Aligned_cols=52 Identities=13% Similarity=0.219 Sum_probs=35.4
Q ss_pred ceEEecCCcchHHHHHH-hCCcEEecccccchhhHHHHHHhhcceeeeeccCCcccccCCCCccccHHHHHHHHHHHhcC
Q 044031 348 GGFVTHCGWSSVVEAVT-YGVPMIAWPLYAEQFLNSVALVQEMKVAMPMFLNGEEETIGNGEGVVSAERVEERVRELMMG 426 (468)
Q Consensus 348 ~~~ithgG~~s~~eal~-~GvP~v~~P~~~DQ~~na~~~~~~~g~g~~~~~~~~~~~~~~~~~~~~~~~l~~av~~~l~~ 426 (468)
+++|+=||-||++.|+. +++|++++-.. .+|.... ++.+++.+++++++++
T Consensus 43 d~vi~iGGDGT~L~a~~~~~~Pilgin~G--------------~lGfl~~--------------~~~~~~~~~l~~~~~g 94 (256)
T PRK14075 43 DLIIVVGGDGTVLKAAKKVGTPLVGFKAG--------------RLGFLSS--------------YTLEEIDRFLEDLKNW 94 (256)
T ss_pred CEEEEECCcHHHHHHHHHcCCCEEEEeCC--------------CCccccc--------------cCHHHHHHHHHHHHcC
Confidence 44999999999999977 57787776531 1333332 5566777777777765
Q ss_pred c
Q 044031 427 S 427 (468)
Q Consensus 427 ~ 427 (468)
.
T Consensus 95 ~ 95 (256)
T PRK14075 95 N 95 (256)
T ss_pred C
Confidence 3
No 250
>KOG2941 consensus Beta-1,4-mannosyltransferase [Posttranslational modification, protein turnover, chaperones]
Probab=35.94 E-value=4.2e+02 Score=25.77 Aligned_cols=144 Identities=16% Similarity=0.235 Sum_probs=84.9
Q ss_pred CCceEEeccCCCcCCCHHHHHHHHHHHHhC---------CC-cEEEEEeCCCCccccCCChhHHhhccCCC----eEecC
Q 044031 269 SGSVVFLCFGSRGTFSAPQLKEIAIGLERS---------NQ-RFLWVVRNPSNAAEAELPEGFLERTKERG----LVVKS 334 (468)
Q Consensus 269 ~~~~v~vs~GS~~~~~~~~~~~~~~al~~~---------~~-~~l~~~~~~~~~~~~~~~~~~~~~~~~~~----~~v~~ 334 (468)
.++.++|| |.+..+.+.+..+.+||..- +. ..+..+.+. ..+-+.+...+...+ -+...
T Consensus 253 ~~pallvs--STswTpDEdf~ILL~AL~~y~~~~~~~~~~lP~llciITGK-----GPlkE~Y~~~I~~~~~~~v~~~tp 325 (444)
T KOG2941|consen 253 ERPALLVS--STSWTPDEDFGILLEALVIYEEQLYDKTHNLPSLLCIITGK-----GPLKEKYSQEIHEKNLQHVQVCTP 325 (444)
T ss_pred CCCeEEEe--cCCCCCcccHHHHHHHHHhhhhhhhhccCCCCcEEEEEcCC-----CchhHHHHHHHHHhcccceeeeec
Confidence 45577776 44445667788888888621 22 233333332 113333433333222 24557
Q ss_pred CCC---HHhhhCccCcceEEecCCcc-----hHHHHHHhCCcEEecccccchhhHHHHHHhhcceeeeeccCCcccccCC
Q 044031 335 WAP---QSTILGHESVGGFVTHCGWS-----SVVEAVTYGVPMIAWPLYAEQFLNSVALVQEMKVAMPMFLNGEEETIGN 406 (468)
Q Consensus 335 ~~p---q~~il~~~~~~~~ithgG~~-----s~~eal~~GvP~v~~P~~~DQ~~na~~~~~~~g~g~~~~~~~~~~~~~~ 406 (468)
|+. +..+|+.++.|+.+|-.-.| -+..-.-+|+|++++-+-. -..+++.-.=|+..
T Consensus 326 WL~aEDYP~ll~saDlGVcLHtSSSGLDLPMKVVDMFGcglPvcA~~fkc-----l~ELVkh~eNGlvF----------- 389 (444)
T KOG2941|consen 326 WLEAEDYPKLLASADLGVCLHTSSSGLDLPMKVVDMFGCGLPVCAVNFKC-----LDELVKHGENGLVF----------- 389 (444)
T ss_pred ccccccchhHhhccccceEeeecCcccCcchhHHHhhcCCCceeeecchh-----HHHHHhcCCCceEe-----------
Confidence 764 66789999999988877666 4667777888888875421 22222331334443
Q ss_pred CCccccHHHHHHHHHHHhc----Cch-hHHHHHHHHHH
Q 044031 407 GEGVVSAERVEERVRELMM----GSE-GKALRERSLEM 439 (468)
Q Consensus 407 ~~~~~~~~~l~~av~~~l~----~~~-~~~~~~~a~~l 439 (468)
-+.+++++.+..+++ |.+ ..++|+|+++-
T Consensus 390 ----~Ds~eLa~ql~~lf~~fp~~a~~l~~lkkn~~e~ 423 (444)
T KOG2941|consen 390 ----EDSEELAEQLQMLFKNFPDNADELNQLKKNLREE 423 (444)
T ss_pred ----ccHHHHHHHHHHHHhcCCCCHHHHHHHHHhhHHH
Confidence 266789999998887 333 56677777654
No 251
>COG0299 PurN Folate-dependent phosphoribosylglycinamide formyltransferase PurN [Nucleotide transport and metabolism]
Probab=35.92 E-value=1.1e+02 Score=26.86 Aligned_cols=120 Identities=20% Similarity=0.198 Sum_probs=74.5
Q ss_pred CHHHH-HHHHHHHHhCCCcEEEEEeCCCCccccCCChhHHhhccCCCeEecCCCCHHhhh-CccCcceEEecCCcchHHH
Q 044031 284 SAPQL-KEIAIGLERSNQRFLWVVRNPSNAAEAELPEGFLERTKERGLVVKSWAPQSTIL-GHESVGGFVTHCGWSSVVE 361 (468)
Q Consensus 284 ~~~~~-~~~~~al~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~pq~~il-~~~~~~~~ithgG~~s~~e 361 (468)
+.+.+ .++++.|+..+..+|...|.. ..+.+.|..+... .|+ -||++ .=.++|..+..+
T Consensus 63 ~r~~~d~~l~~~l~~~~~dlvvLAGyM-----rIL~~~fl~~~~g------------rIlNIHPSL--LP~f~G~h~~~~ 123 (200)
T COG0299 63 SREAFDRALVEALDEYGPDLVVLAGYM-----RILGPEFLSRFEG------------RILNIHPSL--LPAFPGLHAHEQ 123 (200)
T ss_pred CHHHHHHHHHHHHHhcCCCEEEEcchH-----HHcCHHHHHHhhc------------ceEecCccc--ccCCCCchHHHH
Confidence 34444 448888988888888776653 4455666544332 122 38888 899999999999
Q ss_pred HHHhCCcEEeccccc--chhhHHHHHHhhcceeeeeccCCcccccCCCCccccHHHHHHHHHHHhcCchhHHHHHHHHHH
Q 044031 362 AVTYGVPMIAWPLYA--EQFLNSVALVQEMKVAMPMFLNGEEETIGNGEGVVSAERVEERVRELMMGSEGKALRERSLEM 439 (468)
Q Consensus 362 al~~GvP~v~~P~~~--DQ~~na~~~~~~~g~g~~~~~~~~~~~~~~~~~~~~~~~l~~av~~~l~~~~~~~~~~~a~~l 439 (468)
|+.+|+..-++-.+. +..+-.-.+. ...+.+.. . =|.|.|++.|.+. |.+-|-+..+.+
T Consensus 124 A~~aG~k~sG~TVH~V~e~vD~GpII~---Q~~Vpv~~--------~----Dt~etl~~RV~~~----Eh~lyp~~v~~~ 184 (200)
T COG0299 124 ALEAGVKVSGCTVHFVTEGVDTGPIIA---QAAVPVLP--------G----DTAETLEARVLEQ----EHRLYPLAVKLL 184 (200)
T ss_pred HHHcCCCccCcEEEEEccCCCCCCeEE---EEeeeecC--------C----CCHHHHHHHHHHH----HHHHHHHHHHHH
Confidence 999999987766532 2222222221 22344432 2 3888898888764 333455554444
Q ss_pred HH
Q 044031 440 RM 441 (468)
Q Consensus 440 ~~ 441 (468)
.+
T Consensus 185 ~~ 186 (200)
T COG0299 185 AE 186 (200)
T ss_pred Hh
Confidence 43
No 252
>PRK04940 hypothetical protein; Provisional
Probab=35.80 E-value=60 Score=28.13 Aligned_cols=27 Identities=4% Similarity=-0.118 Sum_probs=22.5
Q ss_pred CccEEEe-----cCcHHHhhhCCCCeEEEecc
Q 044031 108 KILSFII-----TSTTSFSYHPNIPTYTYFNS 134 (468)
Q Consensus 108 ~pD~vI~-----~~~~~vA~~lgIP~i~~~~~ 134 (468)
++.++|. +|+.-+|+++|+|.+.+.++
T Consensus 60 ~~~~liGSSLGGyyA~~La~~~g~~aVLiNPA 91 (180)
T PRK04940 60 ERPLICGVGLGGYWAERIGFLCGIRQVIFNPN 91 (180)
T ss_pred CCcEEEEeChHHHHHHHHHHHHCCCEEEECCC
Confidence 4667777 88889999999999998663
No 253
>PRK08199 thiamine pyrophosphate protein; Validated
Probab=35.62 E-value=1.4e+02 Score=31.19 Aligned_cols=27 Identities=26% Similarity=0.217 Sum_probs=22.6
Q ss_pred cceEEecCCcc------hHHHHHHhCCcEEecc
Q 044031 347 VGGFVTHCGWS------SVVEAVTYGVPMIAWP 373 (468)
Q Consensus 347 ~~~~ithgG~~------s~~eal~~GvP~v~~P 373 (468)
.+++++|.|-| .+.+|...++|+|++-
T Consensus 72 ~gv~~~t~GpG~~N~~~gi~~A~~~~~Pvl~i~ 104 (557)
T PRK08199 72 PGICFVTRGPGATNASIGVHTAFQDSTPMILFV 104 (557)
T ss_pred CEEEEeCCCccHHHHHHHHHHHhhcCCCEEEEe
Confidence 44489998876 7889999999999983
No 254
>cd01974 Nitrogenase_MoFe_beta Nitrogenase_MoFe_beta: Nitrogenase MoFe protein, beta subunit. The nitrogenase enzyme catalyzes the ATP-dependent reduction of dinitrogen to ammonia. The Molybdenum (Mo-) nitrogenase is the most widespread and best characterized of these systems. Mo-nitrogenase consists of the MoFe protein (component 1) and the Fe protein (component 2). MoFe is an alpha2beta2 tetramer. This group contains the beta subunit of the MoFe protein. Each alphabeta pair of MoFe contains one P-cluster (at the alphabeta interface) and, one molecule of iron molybdenum cofactor (FeMoco) contained within the alpha subunit. The Fe protein contains a single [4Fe-4S] cluster. Electrons are transferred from the [4Fe-4S] cluster of the Fe protein to the P-cluster of the MoFe and in turn to FeMoCo, the site of substrate reduction.
Probab=35.10 E-value=53 Score=33.04 Aligned_cols=25 Identities=16% Similarity=0.102 Sum_probs=22.1
Q ss_pred CccEEEe-cCcHHHhhhCCCCeEEEe
Q 044031 108 KILSFII-TSTTSFSYHPNIPTYTYF 132 (468)
Q Consensus 108 ~pD~vI~-~~~~~vA~~lgIP~i~~~ 132 (468)
+||++|. .+...+|+++|||++.+.
T Consensus 377 ~pDliiG~s~~~~~a~~~gip~v~~~ 402 (435)
T cd01974 377 PVDLLIGNTYGKYIARDTDIPLVRFG 402 (435)
T ss_pred CCCEEEECccHHHHHHHhCCCEEEee
Confidence 8999999 888899999999987653
No 255
>PRK02649 ppnK inorganic polyphosphate/ATP-NAD kinase; Provisional
Probab=35.05 E-value=76 Score=30.19 Aligned_cols=28 Identities=18% Similarity=0.252 Sum_probs=23.1
Q ss_pred cceEEecCCcchHHHHHHh----CCcEEeccc
Q 044031 347 VGGFVTHCGWSSVVEAVTY----GVPMIAWPL 374 (468)
Q Consensus 347 ~~~~ithgG~~s~~eal~~----GvP~v~~P~ 374 (468)
++++|+=||=||++.+... ++|++++-.
T Consensus 69 ~Dlvi~iGGDGTlL~aar~~~~~~iPilGIN~ 100 (305)
T PRK02649 69 MKFAIVLGGDGTVLSAARQLAPCGIPLLTINT 100 (305)
T ss_pred cCEEEEEeCcHHHHHHHHHhcCCCCcEEEEeC
Confidence 4459999999999999774 789888854
No 256
>COG0052 RpsB Ribosomal protein S2 [Translation, ribosomal structure and biogenesis]
Probab=34.99 E-value=50 Score=30.04 Aligned_cols=26 Identities=8% Similarity=0.045 Sum_probs=19.7
Q ss_pred CccEEEe------cCcHHHhhhCCCCeEEEec
Q 044031 108 KILSFII------TSTTSFSYHPNIPTYTYFN 133 (468)
Q Consensus 108 ~pD~vI~------~~~~~vA~~lgIP~i~~~~ 133 (468)
-||++++ --|..=|.++|||++.+.-
T Consensus 156 ~Pd~l~ViDp~~e~iAv~EA~klgIPVvAlvD 187 (252)
T COG0052 156 LPDVLFVIDPRKEKIAVKEANKLGIPVVALVD 187 (252)
T ss_pred CCCEEEEeCCcHhHHHHHHHHHcCCCEEEEec
Confidence 4999998 2255677889999997644
No 257
>PRK11269 glyoxylate carboligase; Provisional
Probab=34.89 E-value=1.1e+02 Score=32.38 Aligned_cols=27 Identities=15% Similarity=0.364 Sum_probs=22.2
Q ss_pred cceEEecCC------cchHHHHHHhCCcEEecc
Q 044031 347 VGGFVTHCG------WSSVVEAVTYGVPMIAWP 373 (468)
Q Consensus 347 ~~~~ithgG------~~s~~eal~~GvP~v~~P 373 (468)
.+++++|.| .+++++|...++|+|++.
T Consensus 69 ~gv~~~t~GPG~~N~l~gl~~A~~~~~Pvl~I~ 101 (591)
T PRK11269 69 IGVCIGTSGPAGTDMITGLYSASADSIPILCIT 101 (591)
T ss_pred cEEEEECCCCcHHHHHHHHHHHhhcCCCEEEEe
Confidence 444777777 568999999999999995
No 258
>cd01981 Pchlide_reductase_B Pchlide_reductase_B: B protein of the NB protein complex of Protochlorophyllide (Pchlide)_reductase. Pchlide reductase catalyzes the reductive formation of chlorophyllide (chlide) from protochlorophyllide (pchlide) during biosynthesis of chlorophylls and bacteriochlorophylls. This group contains both the light-independent Pchlide reductase (DPOR) and light-dependent Pchlide reductase (LPOR). Angiosperms contain only LPOR, cyanobacteria, algae and gymnosperms contain both DPOR and LPOR, primitive anoxygenic photosynthetic bacteria contain only DPOR. NB is structurally similar to the FeMo protein of nitrogenase, forming an N2B2 heterotetramer. N and B are homologous to the FeMo alpha and beta subunits respectively. Also in common with nitrogenase in vitro DPOR activity requires ATP hydrolysis and dithoionite or ferredoxin as electron donor. The NB protein complex may serve as a catalytic site for Pchlide reduction similar to MoFe for nitrogen reduction.
Probab=34.69 E-value=53 Score=33.01 Aligned_cols=34 Identities=9% Similarity=-0.045 Sum_probs=26.3
Q ss_pred HHHHHHhhhcCCCccEEEe-cCcHHHhhhCCCCeEEEec
Q 044031 96 VFQALENISLTSKILSFII-TSTTSFSYHPNIPTYTYFN 133 (468)
Q Consensus 96 l~~ll~~~~~~~~pD~vI~-~~~~~vA~~lgIP~i~~~~ 133 (468)
+.+++++. +||++|. +....+|+++|+|.+.+..
T Consensus 362 ~~~~i~~~----~pdliig~~~~~~~a~~~gip~~~~~~ 396 (430)
T cd01981 362 VGDMIART----EPELIFGTQMERHIGKRLDIPCAVISA 396 (430)
T ss_pred HHHHHHhh----CCCEEEecchhhHHHHHcCCCEEEEeC
Confidence 44444444 8999999 8888899999999987644
No 259
>PRK07574 formate dehydrogenase; Provisional
Probab=34.62 E-value=3.2e+02 Score=27.04 Aligned_cols=68 Identities=18% Similarity=0.254 Sum_probs=41.7
Q ss_pred eEEeccCCCcCCCHHHHHHHHHHHHhCCCcEEEEEeCCCCccccCCChhHHhhccCCCeEecCCCCHHhhhCccCcceEE
Q 044031 272 VVFLCFGSRGTFSAPQLKEIAIGLERSNQRFLWVVRNPSNAAEAELPEGFLERTKERGLVVKSWAPQSTILGHESVGGFV 351 (468)
Q Consensus 272 ~v~vs~GS~~~~~~~~~~~~~~al~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~pq~~il~~~~~~~~i 351 (468)
+-.|.+|+++ ..+++.|+..|.+++. +... ..+..... ..+ +..+..-.++++.+++ ++
T Consensus 195 VGIvG~G~IG-------~~vA~~l~~fG~~V~~-~dr~------~~~~~~~~---~~g--~~~~~~l~ell~~aDv--V~ 253 (385)
T PRK07574 195 VGIVGAGRIG-------LAVLRRLKPFDVKLHY-TDRH------RLPEEVEQ---ELG--LTYHVSFDSLVSVCDV--VT 253 (385)
T ss_pred EEEECCCHHH-------HHHHHHHHhCCCEEEE-ECCC------CCchhhHh---hcC--ceecCCHHHHhhcCCE--EE
Confidence 8889999987 6677878888888653 3221 01111111 112 2123456788989988 98
Q ss_pred ecCCcchHH
Q 044031 352 THCGWSSVV 360 (468)
Q Consensus 352 thgG~~s~~ 360 (468)
.|+-.+.-.
T Consensus 254 l~lPlt~~T 262 (385)
T PRK07574 254 IHCPLHPET 262 (385)
T ss_pred EcCCCCHHH
Confidence 888766533
No 260
>KOG3062 consensus RNA polymerase II elongator associated protein [General function prediction only]
Probab=34.57 E-value=87 Score=28.24 Aligned_cols=36 Identities=17% Similarity=0.220 Sum_probs=29.8
Q ss_pred ceEEEecCCCccCHHHHHHHHHHHHhCCCCcEEEEE
Q 044031 3 KTIALYPGPAFHHMISMVELGKLILQHRSDVSITIL 38 (468)
Q Consensus 3 ~~Iv~~~~~~~GHv~P~l~LA~~L~~~G~~h~Vt~~ 38 (468)
+-|||.-.|+.|--.-...|.+.|+++|.+..|+++
T Consensus 2 pLVvi~G~P~SGKstrA~~L~~~l~~~~~K~~v~ii 37 (281)
T KOG3062|consen 2 PLVVICGLPCSGKSTRAVELREALKERGTKQSVRII 37 (281)
T ss_pred CeEEEeCCCCCCchhHHHHHHHHHHhhcccceEEEe
Confidence 668888899999999999999999999933335554
No 261
>TIGR00460 fmt methionyl-tRNA formyltransferase. The top-scoring characterized proteins other than methionyl-tRNA formyltransferase (fmt) itself are formyltetrahydrofolate dehydrogenases. The mitochondrial methionyl-tRNA formyltransferases are so divergent that, in a multiple alignment of bacterial fmt, mitochondrial fmt, and formyltetrahydrofolate dehydrogenases, the mitochondrial fmt appears the most different. However, because both bacterial and mitochondrial fmt are included in the seed alignment, all credible fmt sequences score higher than any non-fmt sequence. This enzyme modifies Met on initiator tRNA to f-Met.
Probab=34.54 E-value=1.5e+02 Score=28.22 Aligned_cols=32 Identities=13% Similarity=0.254 Sum_probs=22.1
Q ss_pred eEEEecCCCccCHHHHHHHHHHHHhCCCCcEEEEEeCCC
Q 044031 4 TIALYPGPAFHHMISMVELGKLILQHRSDVSITILVPSM 42 (468)
Q Consensus 4 ~Iv~~~~~~~GHv~P~l~LA~~L~~~G~~h~Vt~~~~~~ 42 (468)
+|+|+..+.. .+...+.|.++| |+|..+.+.+
T Consensus 2 kIvf~Gs~~~-----a~~~L~~L~~~~--~~i~~Vvt~p 33 (313)
T TIGR00460 2 RIVFFGTPTF-----SLPVLEELREDN--FEVVGVVTQP 33 (313)
T ss_pred EEEEECCCHH-----HHHHHHHHHhCC--CcEEEEEcCC
Confidence 4888865543 356667888899 9988776543
No 262
>PRK10637 cysG siroheme synthase; Provisional
Probab=33.96 E-value=2.5e+02 Score=28.46 Aligned_cols=153 Identities=10% Similarity=0.023 Sum_probs=70.5
Q ss_pred CceEEeccCCCcCCCHHHHHHHHHHHHhCCCcEEEEEeCCCCccccCCChhHHhhccCCCeEecCCCCHHhhhCccCcce
Q 044031 270 GSVVFLCFGSRGTFSAPQLKEIAIGLERSNQRFLWVVRNPSNAAEAELPEGFLERTKERGLVVKSWAPQSTILGHESVGG 349 (468)
Q Consensus 270 ~~~v~vs~GS~~~~~~~~~~~~~~al~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~pq~~il~~~~~~~ 349 (468)
+.++.|+.|... ..=++.|...+..+.++... +.+.+.+.....++.+..---+...+....+
T Consensus 13 ~~vlvvGgG~vA-------~rk~~~ll~~ga~v~visp~--------~~~~~~~l~~~~~i~~~~~~~~~~dl~~~~l-- 75 (457)
T PRK10637 13 RDCLLVGGGDVA-------ERKARLLLDAGARLTVNALA--------FIPQFTAWADAGMLTLVEGPFDESLLDTCWL-- 75 (457)
T ss_pred CEEEEECCCHHH-------HHHHHHHHHCCCEEEEEcCC--------CCHHHHHHHhCCCEEEEeCCCChHHhCCCEE--
Confidence 348888887774 22234555677777665432 2233332222233332221112333544444
Q ss_pred EEecCCcchHHHHHHhCCcEEeccc-ccchhhHHHHH----HhhcceeeeeccCCcccccCCCCccccHHHHHHHHHHHh
Q 044031 350 FVTHCGWSSVVEAVTYGVPMIAWPL-YAEQFLNSVAL----VQEMKVAMPMFLNGEEETIGNGEGVVSAERVEERVRELM 424 (468)
Q Consensus 350 ~ithgG~~s~~eal~~GvP~v~~P~-~~DQ~~na~~~----~~~~g~g~~~~~~~~~~~~~~~~~~~~~~~l~~av~~~l 424 (468)
+|.--+--.+.+.++.-.---.++. ..|++..+..+ .+.-++-+.+.++ ...-.-+..|++.|++++
T Consensus 76 v~~at~d~~~n~~i~~~a~~~~~lvN~~d~~~~~~f~~pa~~~~g~l~iaisT~--------G~sP~~a~~lr~~ie~~~ 147 (457)
T PRK10637 76 AIAATDDDAVNQRVSEAAEARRIFCNVVDAPKAASFIMPSIIDRSPLMVAVSSG--------GTSPVLARLLREKLESLL 147 (457)
T ss_pred EEECCCCHHHhHHHHHHHHHcCcEEEECCCcccCeEEEeeEEecCCEEEEEECC--------CCCcHHHHHHHHHHHHhc
Confidence 6666665555555442221112222 13444333221 1121233444431 111123456777777777
Q ss_pred cCchhHHHHHHHHHHHHHHHHhhc
Q 044031 425 MGSEGKALRERSLEMRMMAATAWN 448 (468)
Q Consensus 425 ~~~~~~~~~~~a~~l~~~~~~a~~ 448 (468)
. ++...+-+...++++.+++...
T Consensus 148 ~-~~~~~~~~~~~~~R~~~k~~~~ 170 (457)
T PRK10637 148 P-QHLGQVAKYAGQLRGRVKQQFA 170 (457)
T ss_pred c-hhHHHHHHHHHHHHHHHHHhcC
Confidence 3 3344566666677777666544
No 263
>PRK14092 2-amino-4-hydroxy-6-hydroxymethyldihydropteridine pyrophosphokinase
Probab=33.93 E-value=80 Score=26.89 Aligned_cols=30 Identities=13% Similarity=0.256 Sum_probs=23.1
Q ss_pred CceEEeccCCCcCCCHHHHHHHHHHHHhCC
Q 044031 270 GSVVFLCFGSRGTFSAPQLKEIAIGLERSN 299 (468)
Q Consensus 270 ~~~v~vs~GS~~~~~~~~~~~~~~al~~~~ 299 (468)
+-.||+++||......+.+...++.|+...
T Consensus 7 ~~~v~i~LGSNlg~~~~~l~~A~~~L~~~~ 36 (163)
T PRK14092 7 SALAYVGLGANLGDAAATLRSVLAELAAAP 36 (163)
T ss_pred CCEEEEEecCchHhHHHHHHHHHHHHHhCC
Confidence 348999999998666777888888887643
No 264
>PF06506 PrpR_N: Propionate catabolism activator; InterPro: IPR010524 Two-component signal transduction systems enable bacteria to sense, respond, and adapt to a wide range of environments, stressors, and growth conditions []. Some bacteria can contain up to as many as 200 two-component systems that need tight regulation to prevent unwanted cross-talk []. These pathways have been adapted to response to a wide variety of stimuli, including nutrients, cellular redox state, changes in osmolarity, quorum signals, antibiotics, and more []. Two-component systems are comprised of a sensor histidine kinase (HK) and its cognate response regulator (RR) []. The HK catalyses its own auto-phosphorylation followed by the transfer of the phosphoryl group to the receiver domain on RR; phosphorylation of the RR usually activates an attached output domain, which can then effect changes in cellular physiology, often by regulating gene expression. Some HK are bifunctional, catalysing both the phosphorylation and dephosphorylation of their cognate RR. The input stimuli can regulate either the kinase or phosphatase activity of the bifunctional HK. A variant of the two-component system is the phospho-relay system. Here a hybrid HK auto-phosphorylates and then transfers the phosphoryl group to an internal receiver domain, rather than to a separate RR protein. The phosphoryl group is then shuttled to histidine phosphotransferase (HPT) and subsequently to a terminal RR, which can evoke the desired response [, ]. This entry represents a domain found at the N terminus of several sigma54- dependent transcriptional activators including PrpR, which activates catabolism of propionate. In Salmonella enterica subsp. enterica serovar Typhimurium, PrpR acts as a sensor of 2-methylcitrate (2-MC), an intermediate of the 2-methylcitric acid cycle used by this bacterium to convert propionate to pyruvate []. ; GO: 0000156 two-component response regulator activity, 0003677 DNA binding, 0005524 ATP binding, 0000160 two-component signal transduction system (phosphorelay); PDB: 2Q5C_A 2PJU_A.
Probab=33.86 E-value=52 Score=28.32 Aligned_cols=44 Identities=7% Similarity=0.020 Sum_probs=29.9
Q ss_pred hHHHHHHHHhhhcCCCccEEEe-cCcHHHhhhCCCCeEEEecchhH
Q 044031 93 SSNVFQALENISLTSKILSFII-TSTTSFSYHPNIPTYTYFNSCAS 137 (468)
Q Consensus 93 ~~~l~~ll~~~~~~~~pD~vI~-~~~~~vA~~lgIP~i~~~~~~~~ 137 (468)
...++..++++.. .+.|+||. .....+|+++|+|++.+.++.-+
T Consensus 111 ~~e~~~~i~~~~~-~G~~viVGg~~~~~~A~~~gl~~v~i~sg~es 155 (176)
T PF06506_consen 111 EEEIEAAIKQAKA-EGVDVIVGGGVVCRLARKLGLPGVLIESGEES 155 (176)
T ss_dssp HHHHHHHHHHHHH-TT--EEEESHHHHHHHHHTTSEEEESS--HHH
T ss_pred HHHHHHHHHHHHH-cCCcEEECCHHHHHHHHHcCCcEEEEEecHHH
Confidence 4456666666544 38999999 66788999999999988774433
No 265
>PF03808 Glyco_tran_WecB: Glycosyl transferase WecB/TagA/CpsF family; InterPro: IPR004629 The WecG member of this superfamily, believed to be UDP-N-acetyl-D-mannosaminuronic acid transferase, plays a role in Enterobacterial common antigen (eca) synthesis in Escherichia coli. Another family member, the Bacillus subtilis TagA protein, is involved in the biosynthesis of the cell wall polymer poly(glycerol phosphate). The third family member, CpsF, CMP-N-acetylneuraminic acid synthetase has a role in the capsular polysaccharide biosynthesis pathway.; GO: 0009058 biosynthetic process
Probab=33.71 E-value=1.6e+02 Score=25.25 Aligned_cols=93 Identities=9% Similarity=-0.083 Sum_probs=51.5
Q ss_pred HHHHHHHHHhCCCCcEEEEEeCCCCCCchhhhhhhhccccCCCCCeeEEEcCCCCCCCCCCChhHHHHHHHHHhhHHHHH
Q 044031 19 MVELGKLILQHRSDVSITILVPSMPLEESKTCSYINSISHRLNPIISFYYLPAIQMPSETLSRADIAIESIKLNSSNVFQ 98 (468)
Q Consensus 19 ~l~LA~~L~~~G~~h~Vt~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~i~~~~lp~~~~~~~~~~~~~~~~~~~~l~~ 98 (468)
+..|.+...++| .+|.|++..+.. .....+.+.. .-|++.+.....+++.+ ...+.+.+
T Consensus 37 ~~~l~~~~~~~~--~~ifllG~~~~~-~~~~~~~l~~----~yP~l~ivg~~~g~f~~--------------~~~~~i~~ 95 (172)
T PF03808_consen 37 FPDLLRRAEQRG--KRIFLLGGSEEV-LEKAAANLRR----RYPGLRIVGYHHGYFDE--------------EEEEAIIN 95 (172)
T ss_pred HHHHHHHHHHcC--CeEEEEeCCHHH-HHHHHHHHHH----HCCCeEEEEecCCCCCh--------------hhHHHHHH
Confidence 344555666677 899998765432 2222222222 44688887766553310 01112223
Q ss_pred HHHhhhcCCCccEEEe--------cCcHHHhhhCCCCeEEEecchhH
Q 044031 99 ALENISLTSKILSFII--------TSTTSFSYHPNIPTYTYFNSCAS 137 (468)
Q Consensus 99 ll~~~~~~~~pD~vI~--------~~~~~vA~~lgIP~i~~~~~~~~ 137 (468)
.+++. +||+|++ .|.....++++.+ +.+....++
T Consensus 96 ~I~~~----~pdiv~vglG~PkQE~~~~~~~~~l~~~-v~i~vG~~~ 137 (172)
T PF03808_consen 96 RINAS----GPDIVFVGLGAPKQERWIARHRQRLPAG-VIIGVGGAF 137 (172)
T ss_pred HHHHc----CCCEEEEECCCCHHHHHHHHHHHHCCCC-EEEEECchh
Confidence 34443 9999999 5666677778888 444444433
No 266
>cd03789 GT1_LPS_heptosyltransferase Lipopolysaccharide heptosyltransferase is involved in the biosynthesis of lipooligosaccharide (LOS). Lipopolysaccharide (LPS) is a major component of the outer membrane of gram-negative bacteria. LPS heptosyltransferase transfers heptose molecules from ADP-heptose to 3-deoxy-D-manno-octulosonic acid (KDO), a part of the inner core component of LPS. This family belongs to the GT-B structural superfamily of glycoslytransferases, which have characteristic N- and C-terminal domains each containing a typical Rossmann fold. The two domains have high structural homology despite minimal sequence homology. The large cleft that separates the two domains includes the catalytic center and permits a high degree of flexibility.
Probab=33.55 E-value=56 Score=30.38 Aligned_cols=94 Identities=20% Similarity=0.235 Sum_probs=51.1
Q ss_pred eEEeccCCCc---CCCHHHHHHHHHHHHhCCCcEEEEEeCCCCccccCCChhHHhhccCCC-eEecCCC---CHHhhhCc
Q 044031 272 VVFLCFGSRG---TFSAPQLKEIAIGLERSNQRFLWVVRNPSNAAEAELPEGFLERTKERG-LVVKSWA---PQSTILGH 344 (468)
Q Consensus 272 ~v~vs~GS~~---~~~~~~~~~~~~al~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~-~~v~~~~---pq~~il~~ 344 (468)
.|.+..||.. ..+.+.+.++++.|...+.++++..+.. + ...-+.+.+.....+ +.+.+-. .-..++.+
T Consensus 123 ~i~i~~~~~~~~k~w~~~~~~~l~~~l~~~~~~ivl~g~~~-e---~~~~~~i~~~~~~~~~~~~~~~~~l~e~~~li~~ 198 (279)
T cd03789 123 VVVLPPGASGPAKRWPAERFAALADRLLARGARVVLTGGPA-E---RELAEEIAAALGGPRVVNLAGKTSLRELAALLAR 198 (279)
T ss_pred EEEECCCCCCccccCCHHHHHHHHHHHHHCCCEEEEEechh-h---HHHHHHHHHhcCCCccccCcCCCCHHHHHHHHHh
Confidence 5555555542 4566777777777776667766543332 1 111111111111111 1111211 13467778
Q ss_pred cCcceEEecCCcchHHHHHHhCCcEEec
Q 044031 345 ESVGGFVTHCGWSSVVEAVTYGVPMIAW 372 (468)
Q Consensus 345 ~~~~~~ithgG~~s~~eal~~GvP~v~~ 372 (468)
+++ +|+.-. |.+.=|.+.|+|+|++
T Consensus 199 ~~l--~I~~Ds-g~~HlA~a~~~p~i~l 223 (279)
T cd03789 199 ADL--VVTNDS-GPMHLAAALGTPTVAL 223 (279)
T ss_pred CCE--EEeeCC-HHHHHHHHcCCCEEEE
Confidence 887 998854 5566667899999987
No 267
>cd01976 Nitrogenase_MoFe_alpha Nitrogenase_MoFe_alpha_II: Nitrogenase MoFe protein, beta subunit. A group of proteins similar to the alpha subunit of the MoFe protein of the molybdenum (Mo-) nitrogenase. The nitrogenase enzyme catalyzes the ATP-dependent reduction of dinitrogen to ammonia. The Mo-nitrogenase is the most widespread and best characterized of these systems. Mo-nitrogenase consists of the MoFe protein (component 1) and the Fe protein (component 2). MoFe is an alpha2beta2 tetramer. Each alphabeta pair of MoFe contains one P-cluster (at the alphabeta interface) and, one molecule of iron molybdenum cofactor (FeMoco) contained within the alpha subunit. The Fe protein contains a single [4Fe-4S] cluster. Electrons are transferred from the [4Fe-4S] cluster of the Fe protein to the P-cluster of the MoFe and in turn to FeMoCo, the site of substrate reduction.
Probab=33.42 E-value=53 Score=32.92 Aligned_cols=34 Identities=9% Similarity=-0.070 Sum_probs=27.2
Q ss_pred HHHHHHHhhhcCCCccEEEe-cCcHHHhhhCCCCeEEEe
Q 044031 95 NVFQALENISLTSKILSFII-TSTTSFSYHPNIPTYTYF 132 (468)
Q Consensus 95 ~l~~ll~~~~~~~~pD~vI~-~~~~~vA~~lgIP~i~~~ 132 (468)
.+.+++++. +||++|. .-...+|+++|||...+.
T Consensus 360 e~~~~i~~~----~pDliig~~~~~~~a~k~giP~~~~~ 394 (421)
T cd01976 360 ELEEFVKRL----KPDLIGSGIKEKYVFQKMGIPFRQMH 394 (421)
T ss_pred HHHHHHHHh----CCCEEEecCcchhhhhhcCCCeEeCC
Confidence 445666666 9999999 778889999999997553
No 268
>cd03466 Nitrogenase_NifN_2 Nitrogenase_nifN_2: A subgroup of the NifN subunit of the NifEN complex: NifN forms an alpha2beta2 tetramer with NifE. NifN and nifE are structurally homologous to nitrogenase MoFe protein beta and alpha subunits respectively. NifEN participates in the synthesis of the iron-molybdenum cofactor (FeMoco) of the MoFe protein. NifB-co (an iron and sulfur containing precursor of the FeMoco) from NifB is transferred to the NifEN complex where it is further processed to FeMoco. The nifEN bound precursor of FeMoco has been identified as a molybdenum-free, iron- and sulfur- containing analog of FeMoco. It has been suggested that this nifEN bound precursor also acts as a cofactor precursor in nitrogenase systems which require a cofactor other than FeMoco: i.e. iron-vanadium cofactor (FeVco) or iron only cofactor (FeFeco). This group also contains the Clostidium fused NifN-NifB protein.
Probab=33.25 E-value=59 Score=32.68 Aligned_cols=33 Identities=15% Similarity=0.120 Sum_probs=26.1
Q ss_pred HHHHHHHhhhcCCCccEEEe-cCcHHHhhhCCCCeEEE
Q 044031 95 NVFQALENISLTSKILSFII-TSTTSFSYHPNIPTYTY 131 (468)
Q Consensus 95 ~l~~ll~~~~~~~~pD~vI~-~~~~~vA~~lgIP~i~~ 131 (468)
.+.+++++. +||++|. .+...+|+++|||.+..
T Consensus 363 e~~~~l~~~----~~dliiG~s~~~~~a~~~~ip~~~~ 396 (429)
T cd03466 363 DIESYAKEL----KIDVLIGNSYGRRIAEKLGIPLIRI 396 (429)
T ss_pred HHHHHHHhc----CCCEEEECchhHHHHHHcCCCEEEe
Confidence 344455554 8999999 88889999999998854
No 269
>PF00862 Sucrose_synth: Sucrose synthase; InterPro: IPR000368 Sucrose synthases catalyse the synthesis of sucrose 2.4.1.13 from EC in the following reaction: UDP-glucose + D-fructose = UDP + sucrose This family includes the bulk of the sucrose synthase protein. However the carboxyl terminal region of the sucrose synthases belongs to the glycosyl transferase family IPR001296 from INTERPRO. This enzyme is found mainly in plants but also appears in bacteria.; GO: 0005985 sucrose metabolic process; PDB: 2R60_A 2R66_A 2R68_A 3S27_G 3S29_A 3S28_A.
Probab=33.10 E-value=82 Score=32.03 Aligned_cols=115 Identities=12% Similarity=0.028 Sum_probs=53.3
Q ss_pred CccCHHHHHHHHHHHHh--------CCCC--cEEEEEeCCCCCCch-hhhhhhhccccCCCCCeeEEEcCCCCCC---CC
Q 044031 12 AFHHMISMVELGKLILQ--------HRSD--VSITILVPSMPLEES-KTCSYINSISHRLNPIISFYYLPAIQMP---SE 77 (468)
Q Consensus 12 ~~GHv~P~l~LA~~L~~--------~G~~--h~Vt~~~~~~~~~~~-~~~~~~~~~~~~~~~~i~~~~i~~~~lp---~~ 77 (468)
+.|.+--.+.+|+.|.+ .|-| -+|.++|---+.... ......+... ...+.....+|+.+-. ..
T Consensus 295 TGGQVvYVleqarALe~e~~~ri~~~gl~i~p~i~i~TRlIpd~~~t~~~q~le~~~--gt~~a~IlRvPF~~~~gi~~k 372 (550)
T PF00862_consen 295 TGGQVVYVLEQARALENEMLYRIKLQGLDITPKIDIVTRLIPDAKGTTCNQRLEKVS--GTENARILRVPFGPEKGILRK 372 (550)
T ss_dssp SSHHHHHHHHHHHHHHHHTHHHHHHTT-----EEEEEEE--TBTTCGGGTSSEEEET--TESSEEEEEE-ESESTEEE-S
T ss_pred CCCcEEEEeHHHHHHHHHHHHHHHhcCCCCCCceeeecccccCCcCCCccccccccC--CCCCcEEEEecCCCCcchhhh
Confidence 56778888899988865 3511 125455432222211 1111222221 3346777778877311 11
Q ss_pred CCCh---hHHHHHHHHHhhHHHHHHHHhhhcCCCccEEEe------cCcHHHhhhCCCCeEEEec
Q 044031 78 TLSR---ADIAIESIKLNSSNVFQALENISLTSKILSFII------TSTTSFSYHPNIPTYTYFN 133 (468)
Q Consensus 78 ~~~~---~~~~~~~~~~~~~~l~~ll~~~~~~~~pD~vI~------~~~~~vA~~lgIP~i~~~~ 133 (468)
+-+. .+++..+... ....+.+++. .+||+|+. ..|..+++++|||......
T Consensus 373 wisrf~lWPyLe~fa~d---~~~~i~~e~~--~~PdlI~GnYsDgnlvA~LLs~~lgv~~~~iaH 432 (550)
T PF00862_consen 373 WISRFDLWPYLEEFADD---AEREILAELQ--GKPDLIIGNYSDGNLVASLLSRKLGVTQCFIAH 432 (550)
T ss_dssp ---GGG-GGGHHHHHHH---HHHHHHHHHT--S--SEEEEEHHHHHHHHHHHHHHHT-EEEEE-S
T ss_pred ccchhhchhhHHHHHHH---HHHHHHHHhC--CCCcEEEeccCcchHHHHHHHhhcCCceehhhh
Confidence 1111 1212222222 2233334443 38999999 5577789999999876543
No 270
>TIGR01284 alt_nitrog_alph nitrogenase alpha chain. This model represents the alpha chains of various forms of the nitrogen-fixing enzyme nitrogenase: vanadium-iron, iron-iron, and molybdenum-iron. Most examples of NifD, the molybdenum-iron type nitrogenase alpha chain, are excluded from this model and described instead by equivalog model TIGR01282. It appears by phylogenetic and UPGMA trees that this model represents a distinct clade of NifD homologs, in which arose several molybdenum-independent forms.
Probab=33.05 E-value=43 Score=33.98 Aligned_cols=32 Identities=9% Similarity=0.097 Sum_probs=26.1
Q ss_pred HHHHHHhhhcCCCccEEEe-cCcHHHhhhCCCCeEEE
Q 044031 96 VFQALENISLTSKILSFII-TSTTSFSYHPNIPTYTY 131 (468)
Q Consensus 96 l~~ll~~~~~~~~pD~vI~-~~~~~vA~~lgIP~i~~ 131 (468)
+.+.+++. +||++|. .....+|+++|||++..
T Consensus 387 ~~~~i~~~----~pDllig~~~~~~~a~k~gip~~~~ 419 (457)
T TIGR01284 387 LEEIIEKY----KPDIILTGIREGELAKKLGVPYINI 419 (457)
T ss_pred HHHHHHhc----CCCEEEecCCcchhhhhcCCCEEEc
Confidence 44555555 9999999 88888999999998864
No 271
>PRK07313 phosphopantothenoylcysteine decarboxylase; Validated
Probab=33.00 E-value=61 Score=28.15 Aligned_cols=37 Identities=16% Similarity=0.205 Sum_probs=29.8
Q ss_pred ceEEEecCCCccCHHHHHHHHHHHHhCCCCcEEEEEeCCC
Q 044031 3 KTIALYPGPAFHHMISMVELGKLILQHRSDVSITILVPSM 42 (468)
Q Consensus 3 ~~Iv~~~~~~~GHv~P~l~LA~~L~~~G~~h~Vt~~~~~~ 42 (468)
+||++.-.|+.|=+. ...+.+.|.++| ++|.++.+..
T Consensus 2 k~Ill~vtGsiaa~~-~~~li~~L~~~g--~~V~vv~T~~ 38 (182)
T PRK07313 2 KNILLAVSGSIAAYK-AADLTSQLTKRG--YQVTVLMTKA 38 (182)
T ss_pred CEEEEEEeChHHHHH-HHHHHHHHHHCC--CEEEEEEChh
Confidence 467777777777665 899999999999 9999886543
No 272
>COG0240 GpsA Glycerol-3-phosphate dehydrogenase [Energy production and conversion]
Probab=32.98 E-value=2.4e+02 Score=27.15 Aligned_cols=32 Identities=13% Similarity=0.201 Sum_probs=27.4
Q ss_pred ceEEEecCCCccCHHHHHHHHHHHHhCCCCcEEEEEeCC
Q 044031 3 KTIALYPGPAFHHMISMVELGKLILQHRSDVSITILVPS 41 (468)
Q Consensus 3 ~~Iv~~~~~~~GHv~P~l~LA~~L~~~G~~h~Vt~~~~~ 41 (468)
++|.++-.|+.| .+||..|++.| |+|++-..+
T Consensus 2 ~kI~ViGaGswG-----TALA~~la~ng--~~V~lw~r~ 33 (329)
T COG0240 2 MKIAVIGAGSWG-----TALAKVLARNG--HEVRLWGRD 33 (329)
T ss_pred ceEEEEcCChHH-----HHHHHHHHhcC--CeeEEEecC
Confidence 458899888888 58999999999 999999543
No 273
>PF10087 DUF2325: Uncharacterized protein conserved in bacteria (DUF2325); InterPro: IPR016772 There is currently no experimental data for members of this group or their homologues, nor do they exhibit features indicative of any function.
Probab=32.91 E-value=47 Score=25.30 Aligned_cols=32 Identities=19% Similarity=0.046 Sum_probs=23.6
Q ss_pred CccEEEe---------cC-cHHHhhhCCCCeEEEecchhHHH
Q 044031 108 KILSFII---------TS-TTSFSYHPNIPTYTYFNSCASTL 139 (468)
Q Consensus 108 ~pD~vI~---------~~-~~~vA~~lgIP~i~~~~~~~~~~ 139 (468)
++|+||. .| +...|++.|+|++.....+...+
T Consensus 48 ~aD~VIv~t~~vsH~~~~~vk~~akk~~ip~~~~~~~~~~~l 89 (97)
T PF10087_consen 48 KADLVIVFTDYVSHNAMWKVKKAAKKYGIPIIYSRSRGVSSL 89 (97)
T ss_pred CCCEEEEEeCCcChHHHHHHHHHHHHcCCcEEEECCCCHHHH
Confidence 7899988 22 44588899999998876555543
No 274
>TIGR00661 MJ1255 conserved hypothetical protein. This model represents nearly the full length of MJ1255 from Methanococcus jannaschii and of an unpublished protein from Vibrio cholerae, as well as the C-terminal half of a protein from Methanobacterium thermoautotrophicum. A small region (~50 amino acids) within the domain appears related to a family of sugar transferases.
Probab=32.84 E-value=1.5e+02 Score=28.32 Aligned_cols=32 Identities=22% Similarity=0.320 Sum_probs=25.8
Q ss_pred hhCccCcceEEecCCcchHHHHHHhCCcEEec
Q 044031 341 ILGHESVGGFVTHCGWSSVVEAVTYGVPMIAW 372 (468)
Q Consensus 341 il~~~~~~~~ithgG~~s~~eal~~GvP~v~~ 372 (468)
++..-.-+++|+.++..+..-|-..|+|.+.+
T Consensus 88 ~l~~~~pDlVi~d~~~~~~~aA~~~~iP~i~i 119 (321)
T TIGR00661 88 IIREYNPDLIISDFEYSTVVAAKLLKIPVICI 119 (321)
T ss_pred HHHhcCCCEEEECCchHHHHHHHhcCCCEEEE
Confidence 33434445599999999999999999999966
No 275
>TIGR01862 N2-ase-Ialpha nitrogenase component I, alpha chain. This model represents the alpha chain of all three varieties (Mo-Fe, V-Fe, and Fe-Fe) of component I of nitrogenase.
Probab=32.82 E-value=47 Score=33.54 Aligned_cols=24 Identities=8% Similarity=-0.043 Sum_probs=21.7
Q ss_pred CccEEEe-cCcHHHhhhCCCCeEEE
Q 044031 108 KILSFII-TSTTSFSYHPNIPTYTY 131 (468)
Q Consensus 108 ~pD~vI~-~~~~~vA~~lgIP~i~~ 131 (468)
+||++|. .....+|+++|||.+..
T Consensus 387 ~pdllig~s~~~~~A~~lgip~~~~ 411 (443)
T TIGR01862 387 KPDIIFSGIKEKFVAQKLGVPYRQM 411 (443)
T ss_pred CCCEEEEcCcchhhhhhcCCCeEec
Confidence 8999999 88889999999998854
No 276
>PRK08155 acetolactate synthase catalytic subunit; Validated
Probab=32.39 E-value=92 Score=32.58 Aligned_cols=27 Identities=11% Similarity=0.208 Sum_probs=22.5
Q ss_pred cceEEecCCcc------hHHHHHHhCCcEEecc
Q 044031 347 VGGFVTHCGWS------SVVEAVTYGVPMIAWP 373 (468)
Q Consensus 347 ~~~~ithgG~~------s~~eal~~GvP~v~~P 373 (468)
.+++++|.|-| ++.||...++|+|++-
T Consensus 77 ~gv~~~t~GpG~~N~l~gl~~A~~~~~Pvl~i~ 109 (564)
T PRK08155 77 PAVCMACSGPGATNLVTAIADARLDSIPLVCIT 109 (564)
T ss_pred CeEEEECCCCcHHHHHHHHHHHHhcCCCEEEEe
Confidence 34488888866 7899999999999995
No 277
>PRK08266 hypothetical protein; Provisional
Probab=32.38 E-value=85 Score=32.60 Aligned_cols=26 Identities=15% Similarity=0.181 Sum_probs=22.1
Q ss_pred ceEEecCCcc------hHHHHHHhCCcEEecc
Q 044031 348 GGFVTHCGWS------SVVEAVTYGVPMIAWP 373 (468)
Q Consensus 348 ~~~ithgG~~------s~~eal~~GvP~v~~P 373 (468)
+++++|.|-| ++.||...++|+|++-
T Consensus 70 ~v~~~t~GpG~~N~~~gi~~A~~~~~Pvl~i~ 101 (542)
T PRK08266 70 GVCSVVPGPGVLNAGAALLTAYGCNSPVLCLT 101 (542)
T ss_pred eEEEECCCCcHHHHHHHHHHHHhhCCCEEEEe
Confidence 3488888876 7899999999999984
No 278
>TIGR01285 nifN nitrogenase molybdenum-iron cofactor biosynthesis protein NifN. This protein forms a complex with NifE, and appears as a NifEN in some species. NifEN is a required for producing the molybdenum-iron cofactor of molybdenum-requiring nitrogenases. NifN is closely related to the nitrogenase molybdenum-iron protein beta chain NifK. This model describes most examples of NifN but excludes some cases, such as the putative NifN of Chlorobium tepidum, for which a separate model may be created.
Probab=32.29 E-value=52 Score=33.11 Aligned_cols=33 Identities=6% Similarity=-0.018 Sum_probs=26.2
Q ss_pred HHHHHHHhhhcCCCccEEEe-cCcHHHhhhCCCCeEEE
Q 044031 95 NVFQALENISLTSKILSFII-TSTTSFSYHPNIPTYTY 131 (468)
Q Consensus 95 ~l~~ll~~~~~~~~pD~vI~-~~~~~vA~~lgIP~i~~ 131 (468)
.+.+++++. ++|++|. .....+|+++|||.+-+
T Consensus 364 ~l~~~i~~~----~~dliig~s~~k~~A~~l~ip~ir~ 397 (432)
T TIGR01285 364 DLEDLACAA----GADLLITNSHGRALAQRLALPLVRA 397 (432)
T ss_pred HHHHHHhhc----CCCEEEECcchHHHHHHcCCCEEEe
Confidence 334555555 8999999 88889999999998754
No 279
>PRK03378 ppnK inorganic polyphosphate/ATP-NAD kinase; Provisional
Probab=32.03 E-value=1e+02 Score=29.12 Aligned_cols=53 Identities=9% Similarity=0.149 Sum_probs=36.1
Q ss_pred cceEEecCCcchHHHHHH----hCCcEEecccccchhhHHHHHHhhcceeeeeccCCcccccCCCCccccHHHHHHHHHH
Q 044031 347 VGGFVTHCGWSSVVEAVT----YGVPMIAWPLYAEQFLNSVALVQEMKVAMPMFLNGEEETIGNGEGVVSAERVEERVRE 422 (468)
Q Consensus 347 ~~~~ithgG~~s~~eal~----~GvP~v~~P~~~DQ~~na~~~~~~~g~g~~~~~~~~~~~~~~~~~~~~~~~l~~av~~ 422 (468)
++++|+=||=||++.++. .++|++++-... +|..-. ++.+++.+++++
T Consensus 64 ~d~vi~lGGDGT~L~aa~~~~~~~~Pilgin~G~--------------lGFl~~--------------~~~~~~~~~l~~ 115 (292)
T PRK03378 64 ADLAIVVGGDGNMLGAARVLARYDIKVIGINRGN--------------LGFLTD--------------LDPDNALQQLSD 115 (292)
T ss_pred CCEEEEECCcHHHHHHHHHhcCCCCeEEEEECCC--------------CCcccc--------------cCHHHHHHHHHH
Confidence 344999999999999975 367888775421 233222 556777777777
Q ss_pred HhcCc
Q 044031 423 LMMGS 427 (468)
Q Consensus 423 ~l~~~ 427 (468)
++++.
T Consensus 116 i~~g~ 120 (292)
T PRK03378 116 VLEGH 120 (292)
T ss_pred HHcCC
Confidence 77654
No 280
>PRK10427 putative PTS system fructose-like transporter subunit EIIB; Provisional
Probab=31.66 E-value=1e+02 Score=24.39 Aligned_cols=39 Identities=13% Similarity=0.042 Sum_probs=30.7
Q ss_pred CcceEEEecCCCccCHHHHH---HHHHHHHhCCCCcEEEEEeCC
Q 044031 1 MKKTIALYPGPAFHHMISMV---ELGKLILQHRSDVSITILVPS 41 (468)
Q Consensus 1 m~~~Iv~~~~~~~GHv~P~l---~LA~~L~~~G~~h~Vt~~~~~ 41 (468)
|+++|++++....|-...++ .|.+.-+++| |++.+=+..
T Consensus 1 ~~mkivaVtacp~GiAht~lAAeaL~kAA~~~G--~~i~VE~qg 42 (114)
T PRK10427 1 MMAYLVAVTACVSGVAHTYMAAERLEKLCQLEK--WGVKIETQG 42 (114)
T ss_pred CCceEEEEeeCCCcHHHHHHHHHHHHHHHHHCC--CeEEEEecC
Confidence 66789999988888888887 5666777789 999876543
No 281
>TIGR02852 spore_dpaB dipicolinic acid synthetase, B subunit. Members of this family represent the B subunit of dipicolinic acid synthetase, an enzyme that synthesizes a small molecule that appears to confer heat stability to bacterial endospores such as those of Bacillus subtilis. The A and B subunits are together in what was originally designated the spoVF locus for stage V of endospore formation.
Probab=31.59 E-value=65 Score=28.15 Aligned_cols=37 Identities=8% Similarity=0.075 Sum_probs=30.1
Q ss_pred eEEEecCCCccCHHHHHHHHHHHHhCCCCcEEEEEeCCC
Q 044031 4 TIALYPGPAFHHMISMVELGKLILQHRSDVSITILVPSM 42 (468)
Q Consensus 4 ~Iv~~~~~~~GHv~P~l~LA~~L~~~G~~h~Vt~~~~~~ 42 (468)
||++.-.|+.|=+.-.+.+.++|.++| ++|+++.+..
T Consensus 2 ~I~lgITGs~~a~~a~~~ll~~L~~~g--~~V~vI~S~~ 38 (187)
T TIGR02852 2 RIGFGLTGSHCTLEAVMPQLEKLVDEG--AEVTPIVSET 38 (187)
T ss_pred EEEEEEecHHHHHHHHHHHHHHHHhCc--CEEEEEEchh
Confidence 577777787777776679999999999 9999986544
No 282
>PRK03501 ppnK inorganic polyphosphate/ATP-NAD kinase; Provisional
Probab=31.51 E-value=1.1e+02 Score=28.39 Aligned_cols=27 Identities=15% Similarity=0.035 Sum_probs=21.5
Q ss_pred ceEEecCCcchHHHHHHh-----CCcEEeccc
Q 044031 348 GGFVTHCGWSSVVEAVTY-----GVPMIAWPL 374 (468)
Q Consensus 348 ~~~ithgG~~s~~eal~~-----GvP~v~~P~ 374 (468)
+++|+=||=||++.++.. .+|++++-.
T Consensus 41 D~vi~lGGDGT~L~a~~~~~~~~~~pilgIn~ 72 (264)
T PRK03501 41 NIIVSIGGDGTFLQAVRKTGFREDCLYAGIST 72 (264)
T ss_pred cEEEEECCcHHHHHHHHHhcccCCCeEEeEec
Confidence 449999999999999874 567776654
No 283
>PRK07053 glutamine amidotransferase; Provisional
Probab=31.28 E-value=4e+02 Score=24.14 Aligned_cols=105 Identities=10% Similarity=-0.087 Sum_probs=53.9
Q ss_pred CcceEEEecCCCccCHHHHHHHHHHHHhCCCCcEEEEEeCCCCCCchhhhhhhhccccCCCCCeeEEEcCCCCCCCCCCC
Q 044031 1 MKKTIALYPGPAFHHMISMVELGKLILQHRSDVSITILVPSMPLEESKTCSYINSISHRLNPIISFYYLPAIQMPSETLS 80 (468)
Q Consensus 1 m~~~Iv~~~~~~~GHv~P~l~LA~~L~~~G~~h~Vt~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~i~~~~lp~~~~~ 80 (468)
||+||+++=.--.-++-. |++.|.++| ++++++-........ . ...+++..-++.++.......
T Consensus 1 ~m~~ilviqh~~~e~~g~---i~~~L~~~g--~~~~v~~~~~~~~~~------~-----~~~~~d~lii~Ggp~~~~d~~ 64 (234)
T PRK07053 1 MMKTAVAIRHVAFEDLGS---FEQVLGARG--YRVRYVDVGVDDLET------L-----DALEPDLLVVLGGPIGVYDDE 64 (234)
T ss_pred CCceEEEEECCCCCCChH---HHHHHHHCC--CeEEEEecCCCccCC------C-----CccCCCEEEECCCCCCCCCCC
Confidence 778888885543333333 688888999 999888432211000 0 111344344443321111110
Q ss_pred hhHHHHHHHHHhhHHHHHHHHhhhcCCCccEEEecCcHHHhhhCCCCeE
Q 044031 81 RADIAIESIKLNSSNVFQALENISLTSKILSFIITSTTSFSYHPNIPTY 129 (468)
Q Consensus 81 ~~~~~~~~~~~~~~~l~~ll~~~~~~~~pD~vI~~~~~~vA~~lgIP~i 129 (468)
... .+ ..+.+++++..+..+|-+=|+...+.+|+.+|-.+.
T Consensus 65 ~~p----~~----~~~~~~i~~~~~~~~PvlGIC~G~Qlla~alGg~V~ 105 (234)
T PRK07053 65 LYP----FL----APEIALLRQRLAAGLPTLGICLGAQLIARALGARVY 105 (234)
T ss_pred cCC----cH----HHHHHHHHHHHHCCCCEEEECccHHHHHHHcCCcEe
Confidence 011 11 133455555444336655565778889999988764
No 284
>COG2327 WcaK Polysaccharide pyruvyl transferase family protein [Cell wall/membrane/envelope biogenesis]
Probab=31.15 E-value=2.1e+02 Score=28.13 Aligned_cols=71 Identities=21% Similarity=0.226 Sum_probs=48.5
Q ss_pred HhhhCccCcceEEecCCcchHHHHHHhCCcEEecccccchhhHHHHHHhhcceee-eeccCCcccccCCCCccccHHHHH
Q 044031 339 STILGHESVGGFVTHCGWSSVVEAVTYGVPMIAWPLYAEQFLNSVALVQEMKVAM-PMFLNGEEETIGNGEGVVSAERVE 417 (468)
Q Consensus 339 ~~il~~~~~~~~ithgG~~s~~eal~~GvP~v~~P~~~DQ~~na~~~~~~~g~g~-~~~~~~~~~~~~~~~~~~~~~~l~ 417 (468)
..+++++.+ +|. .=.-|+.-|++.|+|.+++-| |+.+.... +.+|+-- .++. .. ++.+.+.
T Consensus 280 ~~~l~~~dl--~Vg-~R~HsaI~al~~g~p~i~i~Y---~~K~~~l~-~~~gl~~~~~~i--------~~---~~~~~l~ 341 (385)
T COG2327 280 GGILAACDL--IVG-MRLHSAIMALAFGVPAIAIAY---DPKVRGLM-QDLGLPGFAIDI--------DP---LDAEILS 341 (385)
T ss_pred HHHhccCce--EEe-ehhHHHHHHHhcCCCeEEEee---cHHHHHHH-HHcCCCcccccC--------CC---CchHHHH
Confidence 446777775 552 224578889999999999977 56666555 4556652 2331 34 8889999
Q ss_pred HHHHHHhcCc
Q 044031 418 ERVRELMMGS 427 (468)
Q Consensus 418 ~av~~~l~~~ 427 (468)
+.+.+.+.+-
T Consensus 342 ~~~~e~~~~~ 351 (385)
T COG2327 342 AVVLERLTKL 351 (385)
T ss_pred HHHHHHHhcc
Confidence 9988888753
No 285
>TIGR02095 glgA glycogen/starch synthases, ADP-glucose type. This family consists of glycogen (or starch) synthases that use ADP-glucose (EC 2.4.1.21), rather than UDP-glucose (EC 2.4.1.11) as in animals, as the glucose donor. This enzyme is found in bacteria and plants. Whether the name given is glycogen synthase or starch synthase depends on context, and therefore on substrate.
Probab=30.69 E-value=83 Score=31.96 Aligned_cols=38 Identities=11% Similarity=0.072 Sum_probs=27.5
Q ss_pred eEEEecCC------CccCHHHHHHHHHHHHhCCCCcEEEEEeCCCC
Q 044031 4 TIALYPGP------AFHHMISMVELGKLILQHRSDVSITILVPSMP 43 (468)
Q Consensus 4 ~Iv~~~~~------~~GHv~P~l~LA~~L~~~G~~h~Vt~~~~~~~ 43 (468)
||+++++- +.|=-.-.-.|+++|+++| |+|.++++...
T Consensus 2 ~i~~vs~E~~P~~k~GGl~~~v~~L~~aL~~~G--~~v~v~~p~y~ 45 (473)
T TIGR02095 2 RVLFVAAEMAPFAKTGGLADVVGALPKALAALG--HDVRVLLPAYG 45 (473)
T ss_pred eEEEEEeccccccCcCcHHHHHHHHHHHHHHcC--CeEEEEecCCc
Confidence 48887753 2233344578999999999 99999986543
No 286
>COG2099 CobK Precorrin-6x reductase [Coenzyme metabolism]
Probab=30.67 E-value=55 Score=29.94 Aligned_cols=31 Identities=16% Similarity=0.151 Sum_probs=22.6
Q ss_pred HHHHHhhhcCCCccEEEe--cC-------cHHHhhhCCCCeEEE
Q 044031 97 FQALENISLTSKILSFII--TS-------TTSFSYHPNIPTYTY 131 (468)
Q Consensus 97 ~~ll~~~~~~~~pD~vI~--~~-------~~~vA~~lgIP~i~~ 131 (468)
..+++++ +.|+||+ +. -..+|++||||++..
T Consensus 189 ~all~q~----~id~vItK~SG~~Gg~~~Ki~aA~eLgi~VI~I 228 (257)
T COG2099 189 KALLEQY----RIDVVVTKNSGGAGGTYEKIEAARELGIPVIMI 228 (257)
T ss_pred HHHHHHh----CCCEEEEccCCcccCcHHHHHHHHHcCCcEEEE
Confidence 4455555 9999999 22 234899999999975
No 287
>PRK05595 replicative DNA helicase; Provisional
Probab=30.62 E-value=1.1e+02 Score=31.00 Aligned_cols=38 Identities=13% Similarity=0.206 Sum_probs=31.2
Q ss_pred EEEecCCCccCHHHHHHHHHHHH-hCCCCcEEEEEeCCCCC
Q 044031 5 IALYPGPAFHHMISMVELGKLIL-QHRSDVSITILVPSMPL 44 (468)
Q Consensus 5 Iv~~~~~~~GHv~P~l~LA~~L~-~~G~~h~Vt~~~~~~~~ 44 (468)
+++...|+.|-..-.+.+|..++ ++| +.|.|++.+...
T Consensus 204 iviaarpg~GKT~~al~ia~~~a~~~g--~~vl~fSlEms~ 242 (444)
T PRK05595 204 ILIAARPSMGKTTFALNIAEYAALREG--KSVAIFSLEMSK 242 (444)
T ss_pred EEEEecCCCChHHHHHHHHHHHHHHcC--CcEEEEecCCCH
Confidence 56677799999999999999876 568 999999775543
No 288
>PRK08978 acetolactate synthase 2 catalytic subunit; Reviewed
Probab=30.47 E-value=88 Score=32.57 Aligned_cols=26 Identities=23% Similarity=0.385 Sum_probs=22.1
Q ss_pred ceEEecCCcc------hHHHHHHhCCcEEecc
Q 044031 348 GGFVTHCGWS------SVVEAVTYGVPMIAWP 373 (468)
Q Consensus 348 ~~~ithgG~~------s~~eal~~GvP~v~~P 373 (468)
+++++|.|-| ++.||...++|+|++-
T Consensus 65 gv~~~t~GpG~~n~~~~l~~A~~~~~Pvl~i~ 96 (548)
T PRK08978 65 GVCIATSGPGATNLITGLADALLDSVPVVAIT 96 (548)
T ss_pred EEEEECCCCcHHHHHHHHHHHhhcCCCEEEEe
Confidence 3488888876 7899999999999994
No 289
>PRK07525 sulfoacetaldehyde acetyltransferase; Validated
Probab=30.29 E-value=86 Score=33.02 Aligned_cols=28 Identities=18% Similarity=0.184 Sum_probs=23.0
Q ss_pred CcceEEecCCcc------hHHHHHHhCCcEEecc
Q 044031 346 SVGGFVTHCGWS------SVVEAVTYGVPMIAWP 373 (468)
Q Consensus 346 ~~~~~ithgG~~------s~~eal~~GvP~v~~P 373 (468)
..+++++|.|-| ++.+|...++|+|++-
T Consensus 68 ~~gv~~~t~GPG~~n~~~gi~~A~~~~~Pvl~I~ 101 (588)
T PRK07525 68 RMGMVIGQNGPGITNFVTAVATAYWAHTPVVLVT 101 (588)
T ss_pred CCEEEEEcCCccHHHHHHHHHHHhhcCCCEEEEe
Confidence 344589998876 7788999999999996
No 290
>CHL00076 chlB photochlorophyllide reductase subunit B
Probab=30.24 E-value=66 Score=33.18 Aligned_cols=34 Identities=9% Similarity=0.023 Sum_probs=26.3
Q ss_pred HHHHHHHhhhcCCCccEEEe-cCcHHHhhhCCCCeEEEe
Q 044031 95 NVFQALENISLTSKILSFII-TSTTSFSYHPNIPTYTYF 132 (468)
Q Consensus 95 ~l~~ll~~~~~~~~pD~vI~-~~~~~vA~~lgIP~i~~~ 132 (468)
.+++.+++. +||+||. .+...+|+++|||++...
T Consensus 365 ei~~~I~~~----~pdliiGs~~er~ia~~lgiP~~~is 399 (513)
T CHL00076 365 EVGDMIARV----EPSAIFGTQMERHIGKRLDIPCGVIS 399 (513)
T ss_pred HHHHHHHhc----CCCEEEECchhhHHHHHhCCCEEEee
Confidence 334445544 8999999 888889999999997654
No 291
>KOG0081 consensus GTPase Rab27, small G protein superfamily [Intracellular trafficking, secretion, and vesicular transport]
Probab=29.97 E-value=84 Score=26.45 Aligned_cols=40 Identities=10% Similarity=0.075 Sum_probs=27.6
Q ss_pred HHHHHHHHhhhc---CCCccEEEe--------------cCcHHHhhhCCCCeEEEec
Q 044031 94 SNVFQALENISL---TSKILSFII--------------TSTTSFSYHPNIPTYTYFN 133 (468)
Q Consensus 94 ~~l~~ll~~~~~---~~~pD~vI~--------------~~~~~vA~~lgIP~i~~~~ 133 (468)
-..+..+..+.. ...||+|++ .-+..+|+++|+|++-.+.
T Consensus 107 LnvrnWlSQL~~hAYcE~PDivlcGNK~DL~~~R~Vs~~qa~~La~kyglPYfETSA 163 (219)
T KOG0081|consen 107 LNVRNWLSQLQTHAYCENPDIVLCGNKADLEDQRVVSEDQAAALADKYGLPYFETSA 163 (219)
T ss_pred HHHHHHHHHHHHhhccCCCCEEEEcCccchhhhhhhhHHHHHHHHHHhCCCeeeecc
Confidence 344555555543 369999999 2366799999999886544
No 292
>COG1737 RpiR Transcriptional regulators [Transcription]
Probab=29.79 E-value=1.7e+02 Score=27.37 Aligned_cols=89 Identities=20% Similarity=0.230 Sum_probs=55.4
Q ss_pred hHHhhcCCCCCceEEeccCCCcCCCHHHHHHHHHHHHhCCCcEEEEEeCCCCccccCCChhHHhhccCCCeEecCCCCHH
Q 044031 260 CLTWLDSQPSGSVVFLCFGSRGTFSAPQLKEIAIGLERSNQRFLWVVRNPSNAAEAELPEGFLERTKERGLVVKSWAPQS 339 (468)
Q Consensus 260 l~~~l~~~~~~~~v~vs~GS~~~~~~~~~~~~~~al~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~pq~ 339 (468)
..++|..... ++++++|+.+. ....+...|...|.++....... . .+ .+.
T Consensus 123 av~~L~~A~r--I~~~G~g~S~~----vA~~~~~~l~~ig~~~~~~~d~~----------~-------------~~-~~~ 172 (281)
T COG1737 123 AVELLAKARR--IYFFGLGSSGL----VASDLAYKLMRIGLNVVALSDTH----------G-------------QL-MQL 172 (281)
T ss_pred HHHHHHcCCe--EEEEEechhHH----HHHHHHHHHHHcCCceeEecchH----------H-------------HH-HHH
Confidence 3456665444 77777777642 23346667777788876543321 0 11 244
Q ss_pred hhhCccCcceEEecCCcc-----hHHHHHHhCCcEEecccccch
Q 044031 340 TILGHESVGGFVTHCGWS-----SVVEAVTYGVPMIAWPLYAEQ 378 (468)
Q Consensus 340 ~il~~~~~~~~ithgG~~-----s~~eal~~GvP~v~~P~~~DQ 378 (468)
..+...++-++|+|.|.. .+..|-..|+|+|++=-..+-
T Consensus 173 ~~~~~~Dv~i~iS~sG~t~e~i~~a~~ak~~ga~vIaiT~~~~s 216 (281)
T COG1737 173 ALLTPGDVVIAISFSGYTREIVEAAELAKERGAKVIAITDSADS 216 (281)
T ss_pred HhCCCCCEEEEEeCCCCcHHHHHHHHHHHHCCCcEEEEcCCCCC
Confidence 556666666799999976 344556789999999654333
No 293
>PRK05858 hypothetical protein; Provisional
Probab=29.73 E-value=2.2e+02 Score=29.61 Aligned_cols=25 Identities=16% Similarity=0.110 Sum_probs=21.0
Q ss_pred eEEecCCcc------hHHHHHHhCCcEEecc
Q 044031 349 GFVTHCGWS------SVVEAVTYGVPMIAWP 373 (468)
Q Consensus 349 ~~ithgG~~------s~~eal~~GvP~v~~P 373 (468)
+++.|.|-| ++.+|...++|+|++.
T Consensus 70 v~~~t~GpG~~n~~~~i~~A~~~~~Pvl~i~ 100 (542)
T PRK05858 70 VAVLTAGPGVTNGMSAMAAAQFNQSPLVVLG 100 (542)
T ss_pred EEEEcCCchHHHHHHHHHHHHhcCCCEEEEe
Confidence 377787765 8899999999999986
No 294
>PRK08617 acetolactate synthase; Reviewed
Probab=29.69 E-value=98 Score=32.24 Aligned_cols=27 Identities=26% Similarity=0.322 Sum_probs=22.3
Q ss_pred cceEEecCCcc------hHHHHHHhCCcEEecc
Q 044031 347 VGGFVTHCGWS------SVVEAVTYGVPMIAWP 373 (468)
Q Consensus 347 ~~~~ithgG~~------s~~eal~~GvP~v~~P 373 (468)
.+++++|.|-| ++.||...++|+|++-
T Consensus 68 ~gv~~vt~GpG~~N~l~gl~~A~~~~~Pvlvis 100 (552)
T PRK08617 68 PGVVLVTSGPGVSNLATGLVTATAEGDPVVAIG 100 (552)
T ss_pred CEEEEECCCCcHhHhHHHHHHHhhcCCCEEEEe
Confidence 34488888866 7899999999999995
No 295
>COG0297 GlgA Glycogen synthase [Carbohydrate transport and metabolism]
Probab=29.55 E-value=1.9e+02 Score=29.58 Aligned_cols=164 Identities=15% Similarity=0.101 Sum_probs=87.2
Q ss_pred eEEeccCCC-cC-CCHHHHHHHHHHHHhCCCcEEEEEeCCCCccccCCChhHH---hhccCCCeEecCCC-CHHhhhCcc
Q 044031 272 VVFLCFGSR-GT-FSAPQLKEIAIGLERSNQRFLWVVRNPSNAAEAELPEGFL---ERTKERGLVVKSWA-PQSTILGHE 345 (468)
Q Consensus 272 ~v~vs~GS~-~~-~~~~~~~~~~~al~~~~~~~l~~~~~~~~~~~~~~~~~~~---~~~~~~~~~v~~~~-pq~~il~~~ 345 (468)
.-|+.+-|. .. ...+.+.+++..+-+.+.+++. +|.+ + ..+-..+. ++... .+.+.-|. .....+-++
T Consensus 294 ~pl~~~vsRl~~QKG~dl~~~~i~~~l~~~~~~vi-lG~g-d---~~le~~~~~la~~~~~-~~~~~i~~~~~la~~i~a 367 (487)
T COG0297 294 GPLFGFVSRLTAQKGLDLLLEAIDELLEQGWQLVL-LGTG-D---PELEEALRALASRHPG-RVLVVIGYDEPLAHLIYA 367 (487)
T ss_pred CcEEEEeeccccccchhHHHHHHHHHHHhCceEEE-EecC-c---HHHHHHHHHHHHhcCc-eEEEEeeecHHHHHHHHh
Confidence 344444444 32 2234555555555555666554 3433 1 11112222 22222 34333343 333333333
Q ss_pred CcceEEe-----cCCcchHHHHHHhCCcEEeccccc--c----hhhHHHHHHhhcceeeeeccCCcccccCCCCccccHH
Q 044031 346 SVGGFVT-----HCGWSSVVEAVTYGVPMIAWPLYA--E----QFLNSVALVQEMKVAMPMFLNGEEETIGNGEGVVSAE 414 (468)
Q Consensus 346 ~~~~~it-----hgG~~s~~eal~~GvP~v~~P~~~--D----Q~~na~~~~~~~g~g~~~~~~~~~~~~~~~~~~~~~~ 414 (468)
..+.|+- -||. |=++|+++|.+-|+.+..+ | -..++ ..+. |.|+.... .+++
T Consensus 368 gaD~~lmPSrfEPcGL-~ql~amryGtvpIv~~tGGLadTV~~~~~~~--~~~~-gtGf~f~~-------------~~~~ 430 (487)
T COG0297 368 GADVILMPSRFEPCGL-TQLYAMRYGTLPIVRETGGLADTVVDRNEWL--IQGV-GTGFLFLQ-------------TNPD 430 (487)
T ss_pred cCCEEEeCCcCcCCcH-HHHHHHHcCCcceEcccCCccceecCccchh--ccCc-eeEEEEec-------------CCHH
Confidence 3333543 4774 5678999999888888753 3 22222 3333 88888873 6899
Q ss_pred HHHHHHHHHhcCchhHHHHHHHHHHHHHHHHhhcCCCCCChHHHHHHHHHH
Q 044031 415 RVEERVRELMMGSEGKALRERSLEMRMMAATAWNNNDGGSSFTAFSNLFDL 465 (468)
Q Consensus 415 ~l~~av~~~l~~~~~~~~~~~a~~l~~~~~~a~~~~~~g~~~~~~~~~~~~ 465 (468)
.+..++++.+. -|+.....++.....+|. .+-|-....++.++.
T Consensus 431 ~l~~al~rA~~-----~y~~~~~~w~~~~~~~m~--~d~sw~~sa~~y~~l 474 (487)
T COG0297 431 HLANALRRALV-----LYRAPPLLWRKVQPNAMG--ADFSWDLSAKEYVEL 474 (487)
T ss_pred HHHHHHHHHHH-----HhhCCHHHHHHHHHhhcc--cccCchhHHHHHHHH
Confidence 99999987764 344444446666666665 555555555555543
No 296
>PRK08760 replicative DNA helicase; Provisional
Probab=29.46 E-value=91 Score=31.84 Aligned_cols=39 Identities=13% Similarity=0.209 Sum_probs=31.8
Q ss_pred EEEecCCCccCHHHHHHHHHHHHh-CCCCcEEEEEeCCCCCC
Q 044031 5 IALYPGPAFHHMISMVELGKLILQ-HRSDVSITILVPSMPLE 45 (468)
Q Consensus 5 Iv~~~~~~~GHv~P~l~LA~~L~~-~G~~h~Vt~~~~~~~~~ 45 (468)
|++..-|+.|-..-.+.+|...+. .| +.|.|++.+...+
T Consensus 232 ivIaarPg~GKTafal~iA~~~a~~~g--~~V~~fSlEMs~~ 271 (476)
T PRK08760 232 IILAARPAMGKTTFALNIAEYAAIKSK--KGVAVFSMEMSAS 271 (476)
T ss_pred EEEEeCCCCChhHHHHHHHHHHHHhcC--CceEEEeccCCHH
Confidence 677778999999999999999874 58 8899997655443
No 297
>PRK08305 spoVFB dipicolinate synthase subunit B; Reviewed
Probab=29.41 E-value=76 Score=27.95 Aligned_cols=38 Identities=11% Similarity=0.028 Sum_probs=28.5
Q ss_pred ceEEEecCCCccCHHHHHHHHHHHHhCCCCcEEEEEeCCC
Q 044031 3 KTIALYPGPAFHHMISMVELGKLILQHRSDVSITILVPSM 42 (468)
Q Consensus 3 ~~Iv~~~~~~~GHv~P~l~LA~~L~~~G~~h~Vt~~~~~~ 42 (468)
++|++.-.|+-|=+.-.+.|+++|.++| |+|.++.+..
T Consensus 6 k~IllgVTGsiaa~k~a~~lir~L~k~G--~~V~vv~T~a 43 (196)
T PRK08305 6 KRIGFGLTGSHCTYDEVMPEIEKLVDEG--AEVTPIVSYT 43 (196)
T ss_pred CEEEEEEcCHHHHHHHHHHHHHHHHhCc--CEEEEEECHh
Confidence 4677776665554333699999999999 9999996544
No 298
>PF02776 TPP_enzyme_N: Thiamine pyrophosphate enzyme, N-terminal TPP binding domain; InterPro: IPR012001 A number of enzymes require thiamine pyrophosphate (TPP) (vitamin B1) as a cofactor. It has been shown [] that some of these enzymes are structurally related. This represents the N-terminal TPP binding domain of TPP enzymes.; GO: 0030976 thiamine pyrophosphate binding; PDB: 3HWX_1 3FLM_B 3HWW_A 2JLC_A 2JLA_A 2VBG_A 2VBF_B 2Q29_A 2Q27_B 2Q28_B ....
Probab=29.32 E-value=1.3e+02 Score=25.64 Aligned_cols=27 Identities=15% Similarity=0.233 Sum_probs=20.9
Q ss_pred ceEEecCCcc------hHHHHHHhCCcEEeccc
Q 044031 348 GGFVTHCGWS------SVVEAVTYGVPMIAWPL 374 (468)
Q Consensus 348 ~~~ithgG~~------s~~eal~~GvP~v~~P~ 374 (468)
+++++|.|-| ++.+|...++|+|++.-
T Consensus 66 ~v~~~~~GpG~~n~~~~l~~A~~~~~Pvl~i~g 98 (172)
T PF02776_consen 66 GVVIVTSGPGATNALTGLANAYADRIPVLVITG 98 (172)
T ss_dssp EEEEEETTHHHHTTHHHHHHHHHTT-EEEEEEE
T ss_pred eEEEeecccchHHHHHHHhhcccceeeEEEEec
Confidence 3488888754 78889999999999875
No 299
>TIGR00147 lipid kinase, YegS/Rv2252/BmrU family. The E. coli member of this family, YegS has been purified and shown to have phosphatidylglycerol kinase activity. The member from M. tuberculosis, Rv2252, has diacylglycerol kinase activity. BmrU from B. subtilis is in an operon with multidrug efflux transporter Bmr, but is uncharacterized.
Probab=28.85 E-value=2.4e+02 Score=26.47 Aligned_cols=27 Identities=22% Similarity=0.412 Sum_probs=20.3
Q ss_pred ceEEecCCcchHHHHHHh-----CCcEEe-ccc
Q 044031 348 GGFVTHCGWSSVVEAVTY-----GVPMIA-WPL 374 (468)
Q Consensus 348 ~~~ithgG~~s~~eal~~-----GvP~v~-~P~ 374 (468)
+++|.-||=||+.|++.. ..|.++ +|.
T Consensus 59 d~ivv~GGDGTl~~v~~~l~~~~~~~~lgiiP~ 91 (293)
T TIGR00147 59 DTVIAGGGDGTINEVVNALIQLDDIPALGILPL 91 (293)
T ss_pred CEEEEECCCChHHHHHHHHhcCCCCCcEEEEcC
Confidence 349999999999997653 345555 996
No 300
>PF01210 NAD_Gly3P_dh_N: NAD-dependent glycerol-3-phosphate dehydrogenase N-terminus; InterPro: IPR011128 NAD-dependent glycerol-3-phosphate dehydrogenase (GPDH) catalyses the interconversion of dihydroxyacetone phosphate and L-glycerol-3-phosphate. This family represents the N-terminal NAD-binding domain [].; GO: 0016616 oxidoreductase activity, acting on the CH-OH group of donors, NAD or NADP as acceptor, 0051287 NAD binding, 0046168 glycerol-3-phosphate catabolic process, 0055114 oxidation-reduction process, 0005737 cytoplasm; PDB: 1YJ8_B 2PLA_A 1WPQ_B 1X0V_A 1X0X_A 1BG6_A 1TXG_B 1N1G_A 1M67_A 1JDJ_A ....
Probab=28.80 E-value=51 Score=27.70 Aligned_cols=30 Identities=17% Similarity=0.217 Sum_probs=24.7
Q ss_pred EEEecCCCccCHHHHHHHHHHHHhCCCCcEEEEEeCC
Q 044031 5 IALYPGPAFHHMISMVELGKLILQHRSDVSITILVPS 41 (468)
Q Consensus 5 Iv~~~~~~~GHv~P~l~LA~~L~~~G~~h~Vt~~~~~ 41 (468)
|.++-.|..|+ ++|..|+.+| |+|++.+.+
T Consensus 2 I~ViGaG~~G~-----AlA~~la~~g--~~V~l~~~~ 31 (157)
T PF01210_consen 2 IAVIGAGNWGT-----ALAALLADNG--HEVTLWGRD 31 (157)
T ss_dssp EEEESSSHHHH-----HHHHHHHHCT--EEEEEETSC
T ss_pred EEEECcCHHHH-----HHHHHHHHcC--CEEEEEecc
Confidence 66777776665 8999999999 999999554
No 301
>cd01965 Nitrogenase_MoFe_beta_like Nitrogenase_MoFe_beta_like: Nitrogenase MoFe protein, beta subunit_like. The nitrogenase enzyme catalyzes the ATP-dependent reduction of dinitrogen (N2) to ammonia. This group contains the beta subunits of component 1 of the three known genetically distinct types of nitrogenase systems: a molybdenum-dependent nitrogenase (Mo-nitrogenase), a vanadium-dependent nitrogenase (V-nitrogenase), and an iron-only nitrogenase (Fe-nitrogenase). These nitrogenase systems consist of component 1 (MoFe protein, VFe protein or, FeFe protein respectively) and, component 2 (Fe protein). The most widespread and best characterized of these systems is the Mo-nitrogenase. MoFe is an alpha2beta2 tetramer, the alternative nitrogenases are alpha2beta2delta2 hexamers having alpha and beta subunits similar to the alpha and beta subunits of MoFe. For MoFe, each alphabeta pair contains one P-cluster (at the alphabeta interface) and, one molecule of iron molybdenum cofactor (Fe
Probab=28.75 E-value=74 Score=31.95 Aligned_cols=24 Identities=13% Similarity=0.054 Sum_probs=21.8
Q ss_pred CccEEEe-cCcHHHhhhCCCCeEEE
Q 044031 108 KILSFII-TSTTSFSYHPNIPTYTY 131 (468)
Q Consensus 108 ~pD~vI~-~~~~~vA~~lgIP~i~~ 131 (468)
+||++|. .....+|+++|+|.+.+
T Consensus 371 ~pdliig~~~~~~~a~~~~ip~i~~ 395 (428)
T cd01965 371 PVDLLIGNSHGRYLARDLGIPLVRV 395 (428)
T ss_pred CCCEEEECchhHHHHHhcCCCEEEe
Confidence 8999999 88889999999999854
No 302
>PRK06603 enoyl-(acyl carrier protein) reductase; Provisional
Probab=28.59 E-value=93 Score=28.52 Aligned_cols=36 Identities=14% Similarity=0.107 Sum_probs=27.2
Q ss_pred CcceEEEecCCCccCHHHHHHHHHHHHhCCCCcEEEEEe
Q 044031 1 MKKTIALYPGPAFHHMISMVELGKLILQHRSDVSITILV 39 (468)
Q Consensus 1 m~~~Iv~~~~~~~GHv~P~l~LA~~L~~~G~~h~Vt~~~ 39 (468)
|+.++++++.++.|. -=..++|++|+++| ++|.+..
T Consensus 6 ~~~k~~lITGas~~~-GIG~a~a~~la~~G--~~v~~~~ 41 (260)
T PRK06603 6 LQGKKGLITGIANNM-SISWAIAQLAKKHG--AELWFTY 41 (260)
T ss_pred cCCcEEEEECCCCCc-chHHHHHHHHHHcC--CEEEEEe
Confidence 445789999887631 14568899999999 9998763
No 303
>cd06210 MMO_FAD_NAD_binding Methane monooxygenase (MMO) reductase of methanotrophs catalyzes the NADH-dependent hydroxylation of methane to methanol. This multicomponent enzyme mediates electron transfer via a hydroxylase (MMOH), a coupling protein, and a reductase which is comprised of an N-terminal [2Fe-2S] ferredoxin domain, an FAD binding subdomain, and an NADH binding subdomain. Oxygenases oxidize hydrocarbons using dioxygen as the oxidant. Dioxygenases add both atom of oxygen to the substrate, while mono-oxygenases add one atom to the substrate and one atom to water.
Probab=28.55 E-value=1.3e+02 Score=27.01 Aligned_cols=63 Identities=5% Similarity=0.007 Sum_probs=39.1
Q ss_pred eEEEecCCCccCHHHHHHHHHHHHhCCCCcEEEEEeCCCCCCchhhhhhhhccccCCCCCeeEEEc
Q 044031 4 TIALYPGPAFHHMISMVELGKLILQHRSDVSITILVPSMPLEESKTCSYINSISHRLNPIISFYYL 69 (468)
Q Consensus 4 ~Iv~~~~~~~GHv~P~l~LA~~L~~~G~~h~Vt~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~i 69 (468)
+++++..+ --+.|++.+++++.+.+++..|+++......+...+.+....+.. ..+++++..+
T Consensus 110 ~~vliagG--tGiaP~~~~l~~~~~~~~~~~v~l~~~~r~~~~~~~~~~l~~l~~-~~~~~~~~~~ 172 (236)
T cd06210 110 PRWFVAGG--TGLAPLLSMLRRMAEWGEPQEARLFFGVNTEAELFYLDELKRLAD-SLPNLTVRIC 172 (236)
T ss_pred cEEEEccC--cchhHHHHHHHHHHhcCCCceEEEEEecCCHHHhhhHHHHHHHHH-hCCCeEEEEE
Confidence 57777755 368999999999998765567888765544433333333343332 3346666543
No 304
>PRK02910 light-independent protochlorophyllide reductase subunit B; Provisional
Probab=28.55 E-value=74 Score=32.88 Aligned_cols=34 Identities=12% Similarity=-0.041 Sum_probs=25.9
Q ss_pred HHHHHHHhhhcCCCccEEEe-cCcHHHhhhCCCCeEEEe
Q 044031 95 NVFQALENISLTSKILSFII-TSTTSFSYHPNIPTYTYF 132 (468)
Q Consensus 95 ~l~~ll~~~~~~~~pD~vI~-~~~~~vA~~lgIP~i~~~ 132 (468)
.+.+.+++. +||+||. .....+|+++|||++.+.
T Consensus 353 el~~~i~~~----~PdliiG~~~er~~a~~lgiP~~~i~ 387 (519)
T PRK02910 353 EVEDAIAEA----APELVLGTQMERHSAKRLGIPCAVIS 387 (519)
T ss_pred HHHHHHHhc----CCCEEEEcchHHHHHHHcCCCEEEec
Confidence 344444444 8999999 777789999999987653
No 305
>PLN03139 formate dehydrogenase; Provisional
Probab=28.37 E-value=3.4e+02 Score=26.80 Aligned_cols=67 Identities=16% Similarity=0.130 Sum_probs=39.6
Q ss_pred ceEEeccCCCcCCCHHHHHHHHHHHHhCCCcEEEEEeCCCCccccCCChhHHhhccCCCeEecCCCCHHhhhCccCcceE
Q 044031 271 SVVFLCFGSRGTFSAPQLKEIAIGLERSNQRFLWVVRNPSNAAEAELPEGFLERTKERGLVVKSWAPQSTILGHESVGGF 350 (468)
Q Consensus 271 ~~v~vs~GS~~~~~~~~~~~~~~al~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~pq~~il~~~~~~~~ 350 (468)
.+-.|++|.++ ..+++.|...|.+++. +... ..+..... ..++. ....-.++++.+++ +
T Consensus 201 tVGIVG~G~IG-------~~vA~~L~afG~~V~~-~d~~------~~~~~~~~---~~g~~--~~~~l~ell~~sDv--V 259 (386)
T PLN03139 201 TVGTVGAGRIG-------RLLLQRLKPFNCNLLY-HDRL------KMDPELEK---ETGAK--FEEDLDAMLPKCDV--V 259 (386)
T ss_pred EEEEEeecHHH-------HHHHHHHHHCCCEEEE-ECCC------CcchhhHh---hcCce--ecCCHHHHHhhCCE--E
Confidence 38889999987 6677777788988754 3221 01111110 11221 12256678888887 8
Q ss_pred EecCCcch
Q 044031 351 VTHCGWSS 358 (468)
Q Consensus 351 ithgG~~s 358 (468)
+.|+-.+.
T Consensus 260 ~l~lPlt~ 267 (386)
T PLN03139 260 VINTPLTE 267 (386)
T ss_pred EEeCCCCH
Confidence 88876543
No 306
>TIGR02195 heptsyl_trn_II lipopolysaccharide heptosyltransferase II. This family consists of examples of ADP-heptose:LPS heptosyltransferase II, an enzyme of LPS inner core region biosynthesis. LPS, composed of lipid A, a core region, and O antigen, is found in the outer membrane of Gram-negative bacteria.
Probab=28.09 E-value=5.3e+02 Score=24.53 Aligned_cols=26 Identities=8% Similarity=0.093 Sum_probs=21.4
Q ss_pred CccEEEe--cCcHHHhhhCCCCeEEEec
Q 044031 108 KILSFII--TSTTSFSYHPNIPTYTYFN 133 (468)
Q Consensus 108 ~pD~vI~--~~~~~vA~~lgIP~i~~~~ 133 (468)
+.|++|+ +...-+|..+|+|.+.++.
T Consensus 251 ~a~l~I~~DSGp~HlAaA~~~P~i~lfG 278 (334)
T TIGR02195 251 LAKAVVTNDSGLMHVAAALNRPLVALYG 278 (334)
T ss_pred hCCEEEeeCCHHHHHHHHcCCCEEEEEC
Confidence 7799999 5555599999999997655
No 307
>cd01977 Nitrogenase_VFe_alpha Nitrogenase_VFe_alpha -like: Nitrogenase VFe protein, alpha subunit like. This group contains proteins similar to the alpha subunits of, the VFe protein of the vanadium-dependent (V-) nitrogenase and the FeFe protein of the iron only (Fe-) nitrogenase Nitrogenase catalyzes the ATP-dependent reduction of dinitrogen (N2) to ammonia. In addition to V- and Fe- nitrogenases there is a molybdenum (Mo)-dependent nitrogenase which is the most widespread and best characterized of these systems. These systems consist of component 1 (VFe protein, FeFe protein or, MoFe protein respectively) and, component 2 (Fe protein). MoFe is an alpha2beta2 tetramer, V-and Fe- nitrogenases are alpha2beta2delta2 hexamers. The alpha and beta subunits of VFe and FeFe are similar to the alpha and beta subunits of MoFe. For MoFe each alphabeta pair contains one P-cluster (at the alphabeta interface) and, one molecule of iron molybdenum cofactor (FeMoco) contained within the alpha sub
Probab=27.78 E-value=60 Score=32.46 Aligned_cols=24 Identities=8% Similarity=0.043 Sum_probs=21.4
Q ss_pred CccEEEe-cCcHHHhhhCCCCeEEE
Q 044031 108 KILSFII-TSTTSFSYHPNIPTYTY 131 (468)
Q Consensus 108 ~pD~vI~-~~~~~vA~~lgIP~i~~ 131 (468)
+||++|. .....+|+++|||++..
T Consensus 358 ~pdliig~s~~~~~a~~lgip~~~~ 382 (415)
T cd01977 358 KPDIILTGPRVGELVKKLHVPYVNI 382 (415)
T ss_pred CCCEEEecCccchhhhhcCCCEEec
Confidence 8999999 77888999999998864
No 308
>KOG0832 consensus Mitochondrial/chloroplast ribosomal protein S2 [Translation, ribosomal structure and biogenesis]
Probab=27.72 E-value=41 Score=30.07 Aligned_cols=30 Identities=3% Similarity=-0.092 Sum_probs=23.7
Q ss_pred CccCHHHHHHHHHHHHhCCCCcEEEEEeCCCC
Q 044031 12 AFHHMISMVELGKLILQHRSDVSITILVPSMP 43 (468)
Q Consensus 12 ~~GHv~P~l~LA~~L~~~G~~h~Vt~~~~~~~ 43 (468)
+..|+.-.+.++..++.+| -.+.|+++...
T Consensus 90 T~~~Lr~A~~fVa~vA~r~--GiILFv~tn~~ 119 (251)
T KOG0832|consen 90 TASYLRRALNFVAHVAHRG--GIILFVGTNNG 119 (251)
T ss_pred HHHHHHHHHHHHHHHHhcC--CeEEEEecCcc
Confidence 4567788889999999999 88888866543
No 309
>TIGR00118 acolac_lg acetolactate synthase, large subunit, biosynthetic type. Several isozymes of this enzyme are found in E. coli K12, one of which contains a frameshift in the large subunit gene and is not expressed.
Probab=27.52 E-value=2.1e+02 Score=29.84 Aligned_cols=27 Identities=22% Similarity=0.422 Sum_probs=22.5
Q ss_pred cceEEecCCcc------hHHHHHHhCCcEEecc
Q 044031 347 VGGFVTHCGWS------SVVEAVTYGVPMIAWP 373 (468)
Q Consensus 347 ~~~~ithgG~~------s~~eal~~GvP~v~~P 373 (468)
.+++++|.|-| +++||...++|+|++-
T Consensus 65 ~gv~~~t~GpG~~n~l~~i~~A~~~~~Pvl~i~ 97 (558)
T TIGR00118 65 VGVVLVTSGPGATNLVTGIATAYMDSIPMVVFT 97 (558)
T ss_pred CEEEEECCCCcHHHHHHHHHHHHhcCCCEEEEe
Confidence 44488888866 7899999999999994
No 310
>KOG0853 consensus Glycosyltransferase [Cell wall/membrane/envelope biogenesis]
Probab=27.35 E-value=66 Score=32.70 Aligned_cols=66 Identities=14% Similarity=0.137 Sum_probs=40.2
Q ss_pred cCCcchHHHHHHhCCcEEecccccchhhHHHHHHhhcceeeeeccCCcccccCCCCccccHHHHHHHHHHHhcCch-hHH
Q 044031 353 HCGWSSVVEAVTYGVPMIAWPLYAEQFLNSVALVQEMKVAMPMFLNGEEETIGNGEGVVSAERVEERVRELMMGSE-GKA 431 (468)
Q Consensus 353 hgG~~s~~eal~~GvP~v~~P~~~DQ~~na~~~~~~~g~g~~~~~~~~~~~~~~~~~~~~~~~l~~av~~~l~~~~-~~~ 431 (468)
|=| -++.||+++|.|+|+.=-.+ =+.-+ ...--|...++ .+ -....+.+++.++..|++ +.+
T Consensus 377 ~FG-iv~IEAMa~glPvvAt~~GG----P~EiV-~~~~tG~l~dp--------~~---e~~~~~a~~~~kl~~~p~l~~~ 439 (495)
T KOG0853|consen 377 HFG-IVPIEAMACGLPVVATNNGG----PAEIV-VHGVTGLLIDP--------GQ---EAVAELADALLKLRRDPELWAR 439 (495)
T ss_pred Ccc-ceeHHHHhcCCCEEEecCCC----ceEEE-EcCCcceeeCC--------ch---HHHHHHHHHHHHHhcCHHHHHH
Confidence 444 47899999999999974332 12222 22244555552 11 123369999999999995 444
Q ss_pred HHHH
Q 044031 432 LRER 435 (468)
Q Consensus 432 ~~~~ 435 (468)
|.++
T Consensus 440 ~~~~ 443 (495)
T KOG0853|consen 440 MGKN 443 (495)
T ss_pred HHHH
Confidence 4443
No 311
>KOG0069 consensus Glyoxylate/hydroxypyruvate reductase (D-isomer-specific 2-hydroxy acid dehydrogenase superfamily) [Energy production and conversion]
Probab=27.27 E-value=4.3e+02 Score=25.53 Aligned_cols=104 Identities=22% Similarity=0.283 Sum_probs=61.3
Q ss_pred CceEEeccCCCcCCCHHHHHHHHHHHHhCCCcEEEEEeCCCCccccCCChhHHhhccCCCeEecCCCCHHhhhCccCcce
Q 044031 270 GSVVFLCFGSRGTFSAPQLKEIAIGLERSNQRFLWVVRNPSNAAEAELPEGFLERTKERGLVVKSWAPQSTILGHESVGG 349 (468)
Q Consensus 270 ~~~v~vs~GS~~~~~~~~~~~~~~al~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~pq~~il~~~~~~~ 349 (468)
+.+..+.+|+++ ..+++-|...++.+......+ ..++...+. -..++.-.+.+..+++
T Consensus 163 K~vgilG~G~IG-------~~ia~rL~~Fg~~i~y~~r~~------~~~~~~~~~-------~~~~~d~~~~~~~sD~-- 220 (336)
T KOG0069|consen 163 KTVGILGLGRIG-------KAIAKRLKPFGCVILYHSRTQ------LPPEEAYEY-------YAEFVDIEELLANSDV-- 220 (336)
T ss_pred CEEEEecCcHHH-------HHHHHhhhhccceeeeecccC------CchhhHHHh-------cccccCHHHHHhhCCE--
Confidence 348999999997 567777777775555544433 011211111 1125567777888887
Q ss_pred EEecCCcchHHHHHHhCCcEEeccccc--chhhHHHHHHhhcceeeeeccCCcccccCCCCccccHHHHHHHHH
Q 044031 350 FVTHCGWSSVVEAVTYGVPMIAWPLYA--EQFLNSVALVQEMKVAMPMFLNGEEETIGNGEGVVSAERVEERVR 421 (468)
Q Consensus 350 ~ithgG~~s~~eal~~GvP~v~~P~~~--DQ~~na~~~~~~~g~g~~~~~~~~~~~~~~~~~~~~~~~l~~av~ 421 (468)
+|-| +|+.. ..-.|...++ .++-|..+-- ..++.++.++.+.++++
T Consensus 221 ivv~------------------~pLt~~T~~liNk~~~~-~mk~g~vlVN-------~aRG~iide~~l~eaL~ 268 (336)
T KOG0069|consen 221 IVVN------------------CPLTKETRHLINKKFIE-KMKDGAVLVN-------TARGAIIDEEALVEALK 268 (336)
T ss_pred EEEe------------------cCCCHHHHHHhhHHHHH-hcCCCeEEEe-------ccccccccHHHHHHHHh
Confidence 5544 45543 3455777774 5677755532 24456677777777765
No 312
>TIGR01860 VNFD nitrogenase vanadium-iron protein, alpha chain. This model represents the alpha chain of the vanadium-containing component of the vanadium-iron nitrogenase compound I. The complex also includes a second alpha chain, two beta chains and two delta chains. Compount I interacts with compound II also known as the iron-protein which transfers electrons to compound I where the catalysis occurs.
Probab=27.14 E-value=68 Score=32.58 Aligned_cols=23 Identities=13% Similarity=0.053 Sum_probs=20.8
Q ss_pred CccEEEe-cCcHHHhhhCCCCeEE
Q 044031 108 KILSFII-TSTTSFSYHPNIPTYT 130 (468)
Q Consensus 108 ~pD~vI~-~~~~~vA~~lgIP~i~ 130 (468)
+||++|. .....+|+++|||.+.
T Consensus 397 ~pDliig~s~~~~~A~klgiP~vd 420 (461)
T TIGR01860 397 KPDVIFTGPRVGELVKKLHIPYVN 420 (461)
T ss_pred CCCEEEeCCcchhhHhhcCCCEEe
Confidence 8999999 8888899999999873
No 313
>cd02034 CooC The accessory protein CooC, which contains a nucleotide-binding domain (P-loop) near the N-terminus, participates in the maturation of the nickel center of carbon monoxide dehydrogenase (CODH). CODH from Rhodospirillum rubrum catalyzes the reversible oxidation of CO to CO2. CODH contains a nickel-iron-sulfur cluster (C-center) and an iron-sulfur cluster (B-center). CO oxidation occurs at the C-center. Three accessory proteins encoded by cooCTJ genes are involved in nickel incorporation into a nickel site. CooC functions as a nickel insertase that mobilizes nickel to apoCODH using energy released from ATP hydrolysis. CooC is a homodimer and has NTPase activities. Mutation at the P-loop abolishs its function.
Probab=26.89 E-value=1.5e+02 Score=23.54 Aligned_cols=37 Identities=8% Similarity=0.044 Sum_probs=33.2
Q ss_pred eEEEecCCCccCHHHHHHHHHHHHhCCCCcEEEEEeCCC
Q 044031 4 TIALYPGPAFHHMISMVELGKLILQHRSDVSITILVPSM 42 (468)
Q Consensus 4 ~Iv~~~~~~~GHv~P~l~LA~~L~~~G~~h~Vt~~~~~~ 42 (468)
||++..-++.|-......|++.|+++| .+|.++..++
T Consensus 1 ~i~~~GkgG~GKTt~a~~la~~l~~~g--~~V~~id~D~ 37 (116)
T cd02034 1 KIAITGKGGVGKTTIAALLARYLAEKG--KPVLAIDADP 37 (116)
T ss_pred CEEEECCCCCCHHHHHHHHHHHHHHCC--CcEEEEECCc
Confidence 478888899999999999999999999 9999987665
No 314
>TIGR01278 DPOR_BchB light-independent protochlorophyllide reductase, B subunit. This enzyme describes the B subunit of the dark form protochlorophyllide reductase, a nitrogenase-like enzyme. This subunit shows homology to the nitrogenase molybdenum-iron protein. It catalyzes a step in bacteriochlorophyll biosynthesis.
Probab=26.89 E-value=73 Score=32.85 Aligned_cols=26 Identities=8% Similarity=-0.123 Sum_probs=22.1
Q ss_pred CccEEEe-cCcHHHhhhCCCCeEEEec
Q 044031 108 KILSFII-TSTTSFSYHPNIPTYTYFN 133 (468)
Q Consensus 108 ~pD~vI~-~~~~~vA~~lgIP~i~~~~ 133 (468)
+||+||. .....+|+++|||++.+..
T Consensus 364 ~pdliiG~~~er~~a~~lgip~~~i~~ 390 (511)
T TIGR01278 364 EPELVLGTQMERHSAKRLDIPCGVISA 390 (511)
T ss_pred CCCEEEEChHHHHHHHHcCCCEEEecC
Confidence 8999999 7778899999999876533
No 315
>PF06180 CbiK: Cobalt chelatase (CbiK); InterPro: IPR010388 This group, typified by Salmonella typhimurium CbiK, contains anaerobic cobalt chelatases that act in the anaerobic cobalamin biosynthesis pathway [, ]. Cobalamin (vitamin B12) can be complexed with metal via ATP-dependent reactions (aerobic pathway) (e.g., in Pseudomonas denitrificans) or via ATP-independent reactions (anaerobic pathway) (e.g., in S. typhimurium) [, ]. The corresponding cobalt chelatases are not homologous. This group belongs to the class of ATP-independent, single-subunit chelatases that also includes distantly related protoporphyrin IX (PPIX) ferrochelatase (HemH) (Class II chelatases) []. The structure of S. typhimurium CbiK shows that it has a remarkably similar topology to Bacillus subtilis ferrochelatase despite only weak sequence conservation []. Both enzymes contain a histidine residue identified as the metal ion ligand, but CbiK contains a second histidine in place of the glutamic acid residue identified as a general base in PPIX ferrochelatase []. Site-directed mutagenesis has confirmed a role for this histidine and a nearby glutamic acid in cobalt binding, modulating metal ion specificity as well as catalytic efficiency []. It should be noted that CysG and Met8p, which are multifunctional proteins associated with siroheme biosynthesis, include chelatase activity and can therefore be considered as the third class of chelatases []. As with the class II chelatases, they do not require ATP for activity. However, they are not structurally similar to HemH or CbiK, and it is likely that they have arisen by the acquisition of a chelatase function within a dehydrogenase catalytic framework [, ].; GO: 0016852 sirohydrochlorin cobaltochelatase activity; PDB: 1QGO_A 2XWP_A 2XVZ_A 2XVX_A 2XVY_A.
Probab=26.88 E-value=93 Score=28.86 Aligned_cols=38 Identities=8% Similarity=0.187 Sum_probs=25.0
Q ss_pred eEEeccCCCcCCCHH-HHHHHHHHHHh--CCCcEEEEEeCC
Q 044031 272 VVFLCFGSRGTFSAP-QLKEIAIGLER--SNQRFLWVVRNP 309 (468)
Q Consensus 272 ~v~vs~GS~~~~~~~-~~~~~~~al~~--~~~~~l~~~~~~ 309 (468)
+++|||||......+ .+..+-+.++. .+..+-|++.+.
T Consensus 3 IllvsFGTs~~~ar~~ti~~ie~~~~~~fp~~~V~~AfTS~ 43 (262)
T PF06180_consen 3 ILLVSFGTSYPEAREKTIDAIEKAVREAFPDYDVRRAFTSR 43 (262)
T ss_dssp EEEEE---S-CCCCHHHHHHHHHHHHHCSTTSEEEEEES-H
T ss_pred EEEEeCCCCCHHHHHHHHHHHHHHHHHHCCCCcEEEEchHH
Confidence 789999999765554 67777777765 578899998775
No 316
>PF05728 UPF0227: Uncharacterised protein family (UPF0227); InterPro: IPR008886 Despite being classed as uncharacterised proteins, the members of this family are almost certainly enzymes in that they contain a domain distantly related to IPR000073 from INTERPRO. One of the members of this family YqiA has been shown to be a esterase []. Other members, which include the Escherichia coli (strain K12) YcfP protein are uncharacterised.
Probab=26.86 E-value=93 Score=27.17 Aligned_cols=41 Identities=12% Similarity=0.080 Sum_probs=27.0
Q ss_pred HHHHHHHHhhhcCCCccEEEe-----cCcHHHhhhCCCCeEEEecchh
Q 044031 94 SNVFQALENISLTSKILSFII-----TSTTSFSYHPNIPTYTYFNSCA 136 (468)
Q Consensus 94 ~~l~~ll~~~~~~~~pD~vI~-----~~~~~vA~~lgIP~i~~~~~~~ 136 (468)
..+++++++... ...++|. .++.-+|+++|+|.+.+.++-.
T Consensus 47 ~~l~~~i~~~~~--~~~~liGSSlGG~~A~~La~~~~~~avLiNPav~ 92 (187)
T PF05728_consen 47 AQLEQLIEELKP--ENVVLIGSSLGGFYATYLAERYGLPAVLINPAVR 92 (187)
T ss_pred HHHHHHHHhCCC--CCeEEEEEChHHHHHHHHHHHhCCCEEEEcCCCC
Confidence 445666666621 1135555 6677799999999988866443
No 317
>PRK14478 nitrogenase molybdenum-cofactor biosynthesis protein NifE; Provisional
Probab=26.85 E-value=72 Score=32.54 Aligned_cols=31 Identities=10% Similarity=0.213 Sum_probs=25.0
Q ss_pred HHHHHHhhhcCCCccEEEe-cCcHHHhhhCCCCeEE
Q 044031 96 VFQALENISLTSKILSFII-TSTTSFSYHPNIPTYT 130 (468)
Q Consensus 96 l~~ll~~~~~~~~pD~vI~-~~~~~vA~~lgIP~i~ 130 (468)
+.+++++. +||++|. .....+|+++|||++.
T Consensus 385 ~~~~i~~~----~pDliig~s~~~~~a~k~giP~~~ 416 (475)
T PRK14478 385 LYKMLKEA----KADIMLSGGRSQFIALKAGMPWLD 416 (475)
T ss_pred HHHHHhhc----CCCEEEecCchhhhhhhcCCCEEE
Confidence 34445555 9999999 8888999999999873
No 318
>PRK12311 rpsB 30S ribosomal protein S2/unknown domain fusion protein; Provisional
Probab=26.84 E-value=53 Score=31.49 Aligned_cols=27 Identities=7% Similarity=0.001 Sum_probs=21.6
Q ss_pred CCccEEEe------cCcHHHhhhCCCCeEEEec
Q 044031 107 SKILSFII------TSTTSFSYHPNIPTYTYFN 133 (468)
Q Consensus 107 ~~pD~vI~------~~~~~vA~~lgIP~i~~~~ 133 (468)
..||+||. ..+..=|.++|||+|.+.=
T Consensus 151 ~~Pd~viv~d~~~e~~AI~EA~kl~IPvIaivD 183 (326)
T PRK12311 151 GLPDLLFVIDTNKEDIAIQEAQRLGIPVAAIVD 183 (326)
T ss_pred cCCCEEEEeCCccchHHHHHHHHcCCCEEEEee
Confidence 47999998 4567778899999998654
No 319
>PF06925 MGDG_synth: Monogalactosyldiacylglycerol (MGDG) synthase; InterPro: IPR009695 This entry represents a conserved region of approximately 180 residues found towirds the N terminus of a number of plant and bacterial diacylglycerol glucosyltransferases, such as monogalactosyldiacylglycerol synthase [].; GO: 0016758 transferase activity, transferring hexosyl groups, 0009247 glycolipid biosynthetic process
Probab=26.78 E-value=1.6e+02 Score=25.04 Aligned_cols=24 Identities=13% Similarity=0.270 Sum_probs=19.9
Q ss_pred CHHHHHHHHHHHHh-CCCCcEEEEE
Q 044031 15 HMISMVELGKLILQ-HRSDVSITIL 38 (468)
Q Consensus 15 Hv~P~l~LA~~L~~-~G~~h~Vt~~ 38 (468)
|....-+|++.|.+ +|++.+|.++
T Consensus 1 H~~aA~Al~eal~~~~~~~~~v~v~ 25 (169)
T PF06925_consen 1 HNSAARALAEALERRRGPDAEVEVV 25 (169)
T ss_pred CHHHHHHHHHHHHhhcCCCCEEEEE
Confidence 77888999999988 5766888876
No 320
>PRK06914 short chain dehydrogenase; Provisional
Probab=26.74 E-value=1e+02 Score=28.41 Aligned_cols=35 Identities=14% Similarity=0.035 Sum_probs=25.9
Q ss_pred CcceEEEecCCCccCHHHHHHHHHHHHhCCCCcEEEEEeC
Q 044031 1 MKKTIALYPGPAFHHMISMVELGKLILQHRSDVSITILVP 40 (468)
Q Consensus 1 m~~~Iv~~~~~~~GHv~P~l~LA~~L~~~G~~h~Vt~~~~ 40 (468)
|+.+.++++ |+.|.+ ...+++.|+++| ++|+.+.-
T Consensus 1 ~~~k~~lIt-Gasg~i--G~~la~~l~~~G--~~V~~~~r 35 (280)
T PRK06914 1 MNKKIAIVT-GASSGF--GLLTTLELAKKG--YLVIATMR 35 (280)
T ss_pred CCCCEEEEE-CCCchH--HHHHHHHHHhCC--CEEEEEeC
Confidence 655666666 455544 778899999999 99988743
No 321
>COG4088 Predicted nucleotide kinase [Nucleotide transport and metabolism]
Probab=26.72 E-value=86 Score=27.97 Aligned_cols=35 Identities=23% Similarity=0.053 Sum_probs=29.9
Q ss_pred ceEEEecCCCccCHHHHHHHHHHHHhCCCCcEEEEEe
Q 044031 3 KTIALYPGPAFHHMISMVELGKLILQHRSDVSITILV 39 (468)
Q Consensus 3 ~~Iv~~~~~~~GHv~P~l~LA~~L~~~G~~h~Vt~~~ 39 (468)
+-|.+.-+|+.|-..-.-.||++|.+++ |+|...+
T Consensus 2 pLiIlTGyPgsGKTtfakeLak~L~~~i--~~vi~l~ 36 (261)
T COG4088 2 PLIILTGYPGSGKTTFAKELAKELRQEI--WRVIHLE 36 (261)
T ss_pred ceEEEecCCCCCchHHHHHHHHHHHHhh--hhccccc
Confidence 3466667799999999999999999999 9987763
No 322
>PRK07449 2-succinyl-5-enolpyruvyl-6-hydroxy-3-cyclohexene-1-carboxylate synthase; Validated
Probab=26.71 E-value=1.6e+02 Score=30.81 Aligned_cols=25 Identities=32% Similarity=0.517 Sum_probs=21.3
Q ss_pred eEEecCCcc------hHHHHHHhCCcEEecc
Q 044031 349 GFVTHCGWS------SVVEAVTYGVPMIAWP 373 (468)
Q Consensus 349 ~~ithgG~~------s~~eal~~GvP~v~~P 373 (468)
+++.|.|-| ++.||...++|+|++-
T Consensus 75 v~~vt~GpG~~N~l~~i~~A~~~~~Pvl~Is 105 (568)
T PRK07449 75 AVIVTSGTAVANLYPAVIEAGLTGVPLIVLT 105 (568)
T ss_pred EEEECCccHHHhhhHHHHHHhhcCCcEEEEE
Confidence 378887765 7899999999999995
No 323
>PLN02935 Bifunctional NADH kinase/NAD(+) kinase
Probab=26.54 E-value=1.4e+02 Score=30.52 Aligned_cols=54 Identities=15% Similarity=0.237 Sum_probs=37.1
Q ss_pred CcceEEecCCcchHHHHHHh----CCcEEecccccchhhHHHHHHhhcceeeeeccCCcccccCCCCccccHHHHHHHHH
Q 044031 346 SVGGFVTHCGWSSVVEAVTY----GVPMIAWPLYAEQFLNSVALVQEMKVAMPMFLNGEEETIGNGEGVVSAERVEERVR 421 (468)
Q Consensus 346 ~~~~~ithgG~~s~~eal~~----GvP~v~~P~~~DQ~~na~~~~~~~g~g~~~~~~~~~~~~~~~~~~~~~~~l~~av~ 421 (468)
.++++|+=||=||++.|... ++|++++-. - .+|...+ +..+++.+++.
T Consensus 262 ~~DlVIsiGGDGTlL~Aar~~~~~~iPILGIN~------------G--~LGFLt~--------------i~~~e~~~~Le 313 (508)
T PLN02935 262 KVDLVITLGGDGTVLWAASMFKGPVPPVVPFSM------------G--SLGFMTP--------------FHSEQYRDCLD 313 (508)
T ss_pred CCCEEEEECCcHHHHHHHHHhccCCCcEEEEeC------------C--Ccceecc--------------cCHHHHHHHHH
Confidence 34559999999999999774 567776621 1 2444332 66777888888
Q ss_pred HHhcCc
Q 044031 422 ELMMGS 427 (468)
Q Consensus 422 ~~l~~~ 427 (468)
++++++
T Consensus 314 ~il~G~ 319 (508)
T PLN02935 314 AILKGP 319 (508)
T ss_pred HHHcCC
Confidence 887654
No 324
>COG4126 Hydantoin racemase [Amino acid transport and metabolism]
Probab=26.51 E-value=4.5e+02 Score=23.62 Aligned_cols=104 Identities=10% Similarity=0.067 Sum_probs=51.6
Q ss_pred CCccCHHHHHHHHHHHHhC----------------CCCcEEEEEeCCCCCCchhhhhhhhccccC-CCCCeeEEEcCCCC
Q 044031 11 PAFHHMISMVELGKLILQH----------------RSDVSITILVPSMPLEESKTCSYINSISHR-LNPIISFYYLPAIQ 73 (468)
Q Consensus 11 ~~~GHv~P~l~LA~~L~~~----------------G~~h~Vt~~~~~~~~~~~~~~~~~~~~~~~-~~~~i~~~~i~~~~ 73 (468)
.+.++ |.++.+++...- | -+++++|+.+.. ...+.+.+.++..+ ...++.-.+++.-.
T Consensus 76 aCf~D--Pgl~~~Re~~~~PviGi~eAsv~~A~~vg--rrfsViTtt~rs-~~il~~lv~~~g~s~~~~~vrstdl~vL~ 150 (230)
T COG4126 76 ACFSD--PGLAAARERAAIPVIGICEASVLAALFVG--RRFSVITTTERS-RPILEELVRSYGLSRHCRSVRSTDLPVLA 150 (230)
T ss_pred EecCC--hHHHHHHHHhCCCceehhHHHHHHHHHhc--ceEEEEecCccc-HHHHHHHHHhcCccccccceeeCCCCccc
Confidence 34566 888888887643 5 678888765433 23344444444221 11123322222221
Q ss_pred CCCCCCChhHHHHHHHHHhhHHHHHHHHhhhcCCCccEEEecC------cHHHhhhCCCCeEE
Q 044031 74 MPSETLSRADIAIESIKLNSSNVFQALENISLTSKILSFIITS------TTSFSYHPNIPTYT 130 (468)
Q Consensus 74 lp~~~~~~~~~~~~~~~~~~~~l~~ll~~~~~~~~pD~vI~~~------~~~vA~~lgIP~i~ 130 (468)
+ +.... .+-.......+..+++. +.|.|+..+ +..+.+.+|||++-
T Consensus 151 l----~~~~~---~~~~~l~~~~~~a~~ed----gAeaIiLGCAGms~la~~Lq~~~gvPVID 202 (230)
T COG4126 151 L----EGPPE---EAEALLVIEAAEALKED----GAEAIILGCAGMSDLADQLQKAFGVPVID 202 (230)
T ss_pred c----cCChH---HHHHHHHHHHHHHhhhc----CCCEEEEcCccHHHHHHHHHHHhCCCccc
Confidence 1 11111 11112223344445555 889999811 23366668999885
No 325
>COG1052 LdhA Lactate dehydrogenase and related dehydrogenases [Energy production and conversion / Coenzyme metabolism / General function prediction only]
Probab=26.45 E-value=2.8e+02 Score=26.62 Aligned_cols=103 Identities=18% Similarity=0.328 Sum_probs=64.2
Q ss_pred eEEeccCCCcCCCHHHHHHHHHHHHhCCCcEEEEEeCCCCccccCCChhHHhhccCCCeEecCCCCHHhhhCccCcceEE
Q 044031 272 VVFLCFGSRGTFSAPQLKEIAIGLERSNQRFLWVVRNPSNAAEAELPEGFLERTKERGLVVKSWAPQSTILGHESVGGFV 351 (468)
Q Consensus 272 ~v~vs~GS~~~~~~~~~~~~~~al~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~pq~~il~~~~~~~~i 351 (468)
+=.+.+|..+ +.+++-++..|.+++.--... .|+.-. .. -..|++..++|..+++ ++
T Consensus 149 vGIiG~GrIG-------~avA~r~~~Fgm~v~y~~~~~-------~~~~~~------~~-~~~y~~l~ell~~sDi--i~ 205 (324)
T COG1052 149 LGIIGLGRIG-------QAVARRLKGFGMKVLYYDRSP-------NPEAEK------EL-GARYVDLDELLAESDI--IS 205 (324)
T ss_pred EEEECCCHHH-------HHHHHHHhcCCCEEEEECCCC-------ChHHHh------hc-CceeccHHHHHHhCCE--EE
Confidence 5567777776 566777777788877643332 111111 00 1367779999999998 77
Q ss_pred ecCCcchHHHHHHhCCcEEecccccchhhHHHHHHhhcceeeee-ccCCcccccCCCCccccHHHHHHHHHH
Q 044031 352 THCGWSSVVEAVTYGVPMIAWPLYAEQFLNSVALVQEMKVAMPM-FLNGEEETIGNGEGVVSAERVEERVRE 422 (468)
Q Consensus 352 thgG~~s~~eal~~GvP~v~~P~~~DQ~~na~~~~~~~g~g~~~-~~~~~~~~~~~~~~~~~~~~l~~av~~ 422 (468)
-||..+-= ...-.|+..++ .++=|..+ +. .+++++..+.+.+|+++
T Consensus 206 l~~Plt~~----------------T~hLin~~~l~-~mk~ga~lVNt--------aRG~~VDe~ALi~AL~~ 252 (324)
T COG1052 206 LHCPLTPE----------------TRHLINAEELA-KMKPGAILVNT--------ARGGLVDEQALIDALKS 252 (324)
T ss_pred EeCCCChH----------------HhhhcCHHHHH-hCCCCeEEEEC--------CCccccCHHHHHHHHHh
Confidence 67653211 23556888885 66776444 43 45667888888888763
No 326
>COG3349 Uncharacterized conserved protein [Function unknown]
Probab=26.34 E-value=65 Score=32.65 Aligned_cols=29 Identities=7% Similarity=0.021 Sum_probs=24.9
Q ss_pred ceEEEecCCCccCHHHHHHHHHHHHhCCCCcEEEEE
Q 044031 3 KTIALYPGPAFHHMISMVELGKLILQHRSDVSITIL 38 (468)
Q Consensus 3 ~~Iv~~~~~~~GHv~P~l~LA~~L~~~G~~h~Vt~~ 38 (468)
+||+++-.|..| |+-|.+|+++| |+||++
T Consensus 1 ~rVai~GaG~Ag-----L~~a~~La~~g--~~vt~~ 29 (485)
T COG3349 1 MRVAIAGAGLAG-----LAAAYELADAG--YDVTLY 29 (485)
T ss_pred CeEEEEcccHHH-----HHHHHHHHhCC--CceEEE
Confidence 368888777655 88999999999 999999
No 327
>PRK15469 ghrA bifunctional glyoxylate/hydroxypyruvate reductase A; Provisional
Probab=26.32 E-value=5.5e+02 Score=24.50 Aligned_cols=66 Identities=17% Similarity=0.169 Sum_probs=38.8
Q ss_pred ceEEeccCCCcCCCHHHHHHHHHHHHhCCCcEEEEEeCCCCccccCCChhHHhhccCCCeEecCCCCHHhhhCccCcceE
Q 044031 271 SVVFLCFGSRGTFSAPQLKEIAIGLERSNQRFLWVVRNPSNAAEAELPEGFLERTKERGLVVKSWAPQSTILGHESVGGF 350 (468)
Q Consensus 271 ~~v~vs~GS~~~~~~~~~~~~~~al~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~pq~~il~~~~~~~~ 350 (468)
.+.+|++|+++ .++++-|+..|.+++..-... ...+ ++ ..+.....-.++++.+++ +
T Consensus 138 tvgIvG~G~IG-------~~vA~~l~afG~~V~~~~~~~-----~~~~-~~--------~~~~~~~~l~e~l~~aDv--v 194 (312)
T PRK15469 138 TIGILGAGVLG-------SKVAQSLQTWGFPLRCWSRSR-----KSWP-GV--------QSFAGREELSAFLSQTRV--L 194 (312)
T ss_pred EEEEECCCHHH-------HHHHHHHHHCCCEEEEEeCCC-----CCCC-Cc--------eeecccccHHHHHhcCCE--E
Confidence 38889999997 667788888898865322111 0000 10 011122344677888887 8
Q ss_pred EecCCcchH
Q 044031 351 VTHCGWSSV 359 (468)
Q Consensus 351 ithgG~~s~ 359 (468)
+.|+-.+.-
T Consensus 195 v~~lPlt~~ 203 (312)
T PRK15469 195 INLLPNTPE 203 (312)
T ss_pred EECCCCCHH
Confidence 877765543
No 328
>cd01980 Chlide_reductase_Y Chlide_reductase_Y : Y subunit of chlorophyllide (chlide) reductase (BchY). Chlide reductase participates in photosynthetic pigment synthesis playing a role in the conversion of chlorophylls(Chl) into bacteriochlorophylls (BChl). Chlide reductase catalyzes the reduction of the B-ring of the tetrapyrolle. Chlide reductase is a three subunit enzyme (subunits are designated BchX, BchY and BchZ). The similarity between these three subunits and the subunits for nitrogenase suggests that BchX serves as an electron donor for the BchY-BchY catalytic subunits.
Probab=26.31 E-value=83 Score=31.47 Aligned_cols=25 Identities=20% Similarity=0.178 Sum_probs=22.0
Q ss_pred CccEEEe-cCcHHHhhhCCCCeEEEe
Q 044031 108 KILSFII-TSTTSFSYHPNIPTYTYF 132 (468)
Q Consensus 108 ~pD~vI~-~~~~~vA~~lgIP~i~~~ 132 (468)
+||++|. +.+..+|+++|||.+-+.
T Consensus 350 ~pDl~Ig~s~~~~~a~~~giP~~r~~ 375 (416)
T cd01980 350 RPDLAIGTTPLVQYAKEKGIPALYYT 375 (416)
T ss_pred CCCEEEeCChhhHHHHHhCCCEEEec
Confidence 9999999 777889999999997643
No 329
>COG0003 ArsA Predicted ATPase involved in chromosome partitioning [Cell division and chromosome partitioning]
Probab=26.16 E-value=1.4e+02 Score=28.69 Aligned_cols=42 Identities=5% Similarity=0.063 Sum_probs=36.3
Q ss_pred ceEEEecC-CCccCHHHHHHHHHHHHhCCCCcEEEEEeCCCCCCc
Q 044031 3 KTIALYPG-PAFHHMISMVELGKLILQHRSDVSITILVPSMPLEE 46 (468)
Q Consensus 3 ~~Iv~~~~-~~~GHv~P~l~LA~~L~~~G~~h~Vt~~~~~~~~~~ 46 (468)
+||++++. |+-|-..-..++|-.|++.| .+|.++++++.++.
T Consensus 2 ~riv~f~GKGGVGKTT~aaA~A~~lA~~g--~kvLlvStDPAhsL 44 (322)
T COG0003 2 TRIVFFTGKGGVGKTTIAAATAVKLAESG--KKVLLVSTDPAHSL 44 (322)
T ss_pred cEEEEEecCCcccHHHHHHHHHHHHHHcC--CcEEEEEeCCCCch
Confidence 57888887 89999999999999999999 88888888877763
No 330
>PLN02293 adenine phosphoribosyltransferase
Probab=26.05 E-value=1.1e+02 Score=26.61 Aligned_cols=24 Identities=4% Similarity=-0.204 Sum_probs=20.0
Q ss_pred CccEEEe------cCcHHHhhhCCCCeEEE
Q 044031 108 KILSFII------TSTTSFSYHPNIPTYTY 131 (468)
Q Consensus 108 ~pD~vI~------~~~~~vA~~lgIP~i~~ 131 (468)
++|+|++ .++..+|.++|+|++..
T Consensus 62 ~~d~Ivg~e~~Gi~lA~~lA~~Lg~p~v~~ 91 (187)
T PLN02293 62 GISVVAGIEARGFIFGPPIALAIGAKFVPL 91 (187)
T ss_pred CCCEEEEeCCCchHHHHHHHHHHCCCEEEE
Confidence 7899999 56777999999997754
No 331
>PRK06487 glycerate dehydrogenase; Provisional
Probab=26.03 E-value=2.9e+02 Score=26.38 Aligned_cols=60 Identities=18% Similarity=0.172 Sum_probs=38.9
Q ss_pred CceEEeccCCCcCCCHHHHHHHHHHHHhCCCcEEEEEeCCCCccccCCChhHHhhccCCCeEecCCCCHHhhhCccCcce
Q 044031 270 GSVVFLCFGSRGTFSAPQLKEIAIGLERSNQRFLWVVRNPSNAAEAELPEGFLERTKERGLVVKSWAPQSTILGHESVGG 349 (468)
Q Consensus 270 ~~~v~vs~GS~~~~~~~~~~~~~~al~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~pq~~il~~~~~~~ 349 (468)
+.+-.|++|+.+ +++++.++..|.+++..-... ... ...+++-.++|+.+++
T Consensus 149 ktvgIiG~G~IG-------~~vA~~l~~fgm~V~~~~~~~--------~~~-----------~~~~~~l~ell~~sDi-- 200 (317)
T PRK06487 149 KTLGLLGHGELG-------GAVARLAEAFGMRVLIGQLPG--------RPA-----------RPDRLPLDELLPQVDA-- 200 (317)
T ss_pred CEEEEECCCHHH-------HHHHHHHhhCCCEEEEECCCC--------Ccc-----------cccccCHHHHHHhCCE--
Confidence 338899999987 667777888899876432111 000 1134567788888887
Q ss_pred EEecCCcc
Q 044031 350 FVTHCGWS 357 (468)
Q Consensus 350 ~ithgG~~ 357 (468)
++-|+-.+
T Consensus 201 v~l~lPlt 208 (317)
T PRK06487 201 LTLHCPLT 208 (317)
T ss_pred EEECCCCC
Confidence 77666543
No 332
>PRK13982 bifunctional SbtC-like/phosphopantothenoylcysteine decarboxylase/phosphopantothenate synthase; Provisional
Probab=25.93 E-value=1.5e+02 Score=30.11 Aligned_cols=37 Identities=8% Similarity=0.203 Sum_probs=28.9
Q ss_pred ceEEEecCCCccCHHH------------HHHHHHHHHhCCCCcEEEEEeCC
Q 044031 3 KTIALYPGPAFHHMIS------------MVELGKLILQHRSDVSITILVPS 41 (468)
Q Consensus 3 ~~Iv~~~~~~~GHv~P------------~l~LA~~L~~~G~~h~Vt~~~~~ 41 (468)
+||++...|+.=.+.| ..+||+++..+| ++||+++..
T Consensus 257 kkvLITaGpT~E~IDpVR~ItN~SSGkmG~alA~aa~~~G--A~VtlI~Gp 305 (475)
T PRK13982 257 RRVLITAGPTHEPIDPVRYIANRSSGKQGFAIAAAAAAAG--AEVTLISGP 305 (475)
T ss_pred CEEEEecCCccccCCcceeeCCCCchHHHHHHHHHHHHCC--CcEEEEeCC
Confidence 3677777777666665 478999999999 999999643
No 333
>PRK08410 2-hydroxyacid dehydrogenase; Provisional
Probab=25.68 E-value=2.9e+02 Score=26.32 Aligned_cols=99 Identities=12% Similarity=0.204 Sum_probs=60.0
Q ss_pred CceEEeccCCCcCCCHHHHHHHHHHHHhCCCcEEEEEeCCCCccccCCChhHHhhccCCCeEecCCCCHHhhhCccCcce
Q 044031 270 GSVVFLCFGSRGTFSAPQLKEIAIGLERSNQRFLWVVRNPSNAAEAELPEGFLERTKERGLVVKSWAPQSTILGHESVGG 349 (468)
Q Consensus 270 ~~~v~vs~GS~~~~~~~~~~~~~~al~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~pq~~il~~~~~~~ 349 (468)
+.+-.|++|+.+ +++++.++..|.+++..-... ... ..+ + .+.+-.++|+.+++
T Consensus 146 ktvGIiG~G~IG-------~~vA~~~~~fgm~V~~~d~~~-------~~~-------~~~--~-~~~~l~ell~~sDv-- 199 (311)
T PRK08410 146 KKWGIIGLGTIG-------KRVAKIAQAFGAKVVYYSTSG-------KNK-------NEE--Y-ERVSLEELLKTSDI-- 199 (311)
T ss_pred CEEEEECCCHHH-------HHHHHHHhhcCCEEEEECCCc-------ccc-------ccC--c-eeecHHHHhhcCCE--
Confidence 348899999987 566777777788876432111 000 001 1 35577888999987
Q ss_pred EEecCCcchHHHHHHhCCcEEeccccc--chhhHHHHHHhhccee-eeeccCCcccccCCCCccccHHHHHHHHH
Q 044031 350 FVTHCGWSSVVEAVTYGVPMIAWPLYA--EQFLNSVALVQEMKVA-MPMFLNGEEETIGNGEGVVSAERVEERVR 421 (468)
Q Consensus 350 ~ithgG~~s~~eal~~GvP~v~~P~~~--DQ~~na~~~~~~~g~g-~~~~~~~~~~~~~~~~~~~~~~~l~~av~ 421 (468)
++-|+ |+.. ....|+..+. .++=| +.++. .+++++..+.|.++++
T Consensus 200 v~lh~------------------Plt~~T~~li~~~~~~-~Mk~~a~lIN~--------aRG~vVDe~AL~~AL~ 247 (311)
T PRK08410 200 ISIHA------------------PLNEKTKNLIAYKELK-LLKDGAILINV--------GRGGIVNEKDLAKALD 247 (311)
T ss_pred EEEeC------------------CCCchhhcccCHHHHH-hCCCCeEEEEC--------CCccccCHHHHHHHHH
Confidence 66665 5442 3456777774 55655 33343 3456677777777765
No 334
>TIGR02201 heptsyl_trn_III lipopolysaccharide heptosyltransferase III, putative. This family consists of examples of the putative ADP-heptose:LPS heptosyltransferase III, an enzyme of LPS inner core region biosynthesis. LPS, composed of lipid A, a core region, and O antigen, is found in the outer membrane of Gram-negative bacteria. This enzyme may be less widely distributed than heptosyltransferases I and II.
Probab=25.56 E-value=4.5e+02 Score=25.16 Aligned_cols=26 Identities=15% Similarity=0.158 Sum_probs=21.7
Q ss_pred CccEEEe--cCcHHHhhhCCCCeEEEec
Q 044031 108 KILSFII--TSTTSFSYHPNIPTYTYFN 133 (468)
Q Consensus 108 ~pD~vI~--~~~~~vA~~lgIP~i~~~~ 133 (468)
+.|++|+ +...-+|..+|+|.+.++.
T Consensus 260 ~a~l~Vs~DSGp~HlAaA~g~p~v~Lfg 287 (344)
T TIGR02201 260 HARLFIGVDSVPMHMAAALGTPLVALFG 287 (344)
T ss_pred hCCEEEecCCHHHHHHHHcCCCEEEEEC
Confidence 7799999 5555599999999998765
No 335
>PRK06457 pyruvate dehydrogenase; Provisional
Probab=25.51 E-value=1.2e+02 Score=31.53 Aligned_cols=27 Identities=19% Similarity=0.192 Sum_probs=22.4
Q ss_pred cceEEecCCcc------hHHHHHHhCCcEEecc
Q 044031 347 VGGFVTHCGWS------SVVEAVTYGVPMIAWP 373 (468)
Q Consensus 347 ~~~~ithgG~~------s~~eal~~GvP~v~~P 373 (468)
.+++++|+|-| ++.||...++|+|++-
T Consensus 65 pgv~~~t~GPG~~N~l~~l~~A~~~~~Pvl~i~ 97 (549)
T PRK06457 65 PSACMGTSGPGSIHLLNGLYDAKMDHAPVIALT 97 (549)
T ss_pred CeEEEeCCCCchhhhHHHHHHHHhcCCCEEEEe
Confidence 33488998866 7889999999999994
No 336
>COG2230 Cfa Cyclopropane fatty acid synthase and related methyltransferases [Cell envelope biogenesis, outer membrane]
Probab=25.42 E-value=75 Score=29.77 Aligned_cols=91 Identities=20% Similarity=0.326 Sum_probs=58.8
Q ss_pred chhHHhhcCCCCCceEEeccCCCcCCCHHHHHHHHHHHHhCCCcEEEEEeCCCCccccCCChhHHhhccCCCeEecCCCC
Q 044031 258 SDCLTWLDSQPSGSVVFLCFGSRGTFSAPQLKEIAIGLERSNQRFLWVVRNPSNAAEAELPEGFLERTKERGLVVKSWAP 337 (468)
Q Consensus 258 ~~l~~~l~~~~~~~~v~vs~GS~~~~~~~~~~~~~~al~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~p 337 (468)
+-...||+..-.-+.-|+.-+.+ .+...+..++-..++..+.. +|..+.+
T Consensus 29 ~fy~l~Ld~~~~Yscayf~~~~~-tL~eAQ~~k~~~~~~kl~L~--------------------------~G~~lLD--- 78 (283)
T COG2230 29 DFYRLFLDPSMTYSCAYFEDPDM-TLEEAQRAKLDLILEKLGLK--------------------------PGMTLLD--- 78 (283)
T ss_pred HHHHHhcCCCCceeeEEeCCCCC-ChHHHHHHHHHHHHHhcCCC--------------------------CCCEEEE---
Confidence 34456777765556777776654 34555555555544433221 2333411
Q ss_pred HHhhhCccCcceEEecCCcchHH--HHHHhCCcEEecccccchhhHHHHHHhhccee
Q 044031 338 QSTILGHESVGGFVTHCGWSSVV--EAVTYGVPMIAWPLYAEQFLNSVALVQEMKVA 392 (468)
Q Consensus 338 q~~il~~~~~~~~ithgG~~s~~--eal~~GvP~v~~P~~~DQ~~na~~~~~~~g~g 392 (468)
+ -||||+++ -|-.+||-++++=+...|..+++.-..+.|+-
T Consensus 79 ---------i-----GCGWG~l~~~aA~~y~v~V~GvTlS~~Q~~~~~~r~~~~gl~ 121 (283)
T COG2230 79 ---------I-----GCGWGGLAIYAAEEYGVTVVGVTLSEEQLAYAEKRIAARGLE 121 (283)
T ss_pred ---------e-----CCChhHHHHHHHHHcCCEEEEeeCCHHHHHHHHHHHHHcCCC
Confidence 2 58999654 56677999999999999999998844455877
No 337
>PF03446 NAD_binding_2: NAD binding domain of 6-phosphogluconate dehydrogenase; InterPro: IPR006115 6-Phosphogluconate dehydrogenase (1.1.1.44 from EC) (6PGD) is an oxidative carboxylase that catalyses the decarboxylating reduction of 6-phosphogluconate into ribulose 5-phosphate in the presence of NADP. This reaction is a component of the hexose mono-phosphate shunt and pentose phosphate pathways (PPP) [, ]. Prokaryotic and eukaryotic 6PGD are proteins of about 470 amino acids whose sequence are highly conserved []. The protein is a homodimer in which the monomers act independently []: each contains a large, mainly alpha-helical domain and a smaller beta-alpha-beta domain, containing a mixed parallel and anti-parallel 6-stranded beta sheet []. NADP is bound in a cleft in the small domain, the substrate binding in an adjacent pocket []. This family represents the NADP binding domain of 6-phosphogluconate dehydrogenase which adopts a Rossman fold. The C-terminal domain is described in IPR006114 from INTERPRO.; GO: 0004616 phosphogluconate dehydrogenase (decarboxylating) activity, 0006098 pentose-phosphate shunt, 0055114 oxidation-reduction process; PDB: 3AX6_D 3PDU_G 3Q3C_A 3OBB_A 4DLL_B 1PGP_A 1PGN_A 2PGD_A 1PGQ_A 1PGO_A ....
Probab=25.16 E-value=62 Score=27.35 Aligned_cols=30 Identities=7% Similarity=0.067 Sum_probs=23.9
Q ss_pred ceEEEecCCCccCHHHHHHHHHHHHhCCCCcEEEEEe
Q 044031 3 KTIALYPGPAFHHMISMVELGKLILQHRSDVSITILV 39 (468)
Q Consensus 3 ~~Iv~~~~~~~GHv~P~l~LA~~L~~~G~~h~Vt~~~ 39 (468)
++|.|+-.+..|. .+|+.|.++| |+|+...
T Consensus 2 ~~Ig~IGlG~mG~-----~~a~~L~~~g--~~v~~~d 31 (163)
T PF03446_consen 2 MKIGFIGLGNMGS-----AMARNLAKAG--YEVTVYD 31 (163)
T ss_dssp BEEEEE--SHHHH-----HHHHHHHHTT--TEEEEEE
T ss_pred CEEEEEchHHHHH-----HHHHHHHhcC--CeEEeec
Confidence 5799998887775 7899999999 9999873
No 338
>PRK10964 ADP-heptose:LPS heptosyl transferase I; Provisional
Probab=25.14 E-value=1.1e+02 Score=29.31 Aligned_cols=38 Identities=5% Similarity=0.039 Sum_probs=34.9
Q ss_pred eEEEecCCCccCHHHHHHHHHHHHhCCCCcEEEEEeCC
Q 044031 4 TIALYPGPAFHHMISMVELGKLILQHRSDVSITILVPS 41 (468)
Q Consensus 4 ~Iv~~~~~~~GHv~P~l~LA~~L~~~G~~h~Vt~~~~~ 41 (468)
||+++-....|++.=...+.+.|+++=|+.+||+++..
T Consensus 2 ~ILii~~~~iGD~v~~~p~~~~lk~~~P~a~I~~l~~~ 39 (322)
T PRK10964 2 RVLIVKTSSMGDVLHTLPALTDAQQAIPGIQFDWVVEE 39 (322)
T ss_pred eEEEEeccchHHHHhHHHHHHHHHHhCCCCEEEEEECH
Confidence 59999999999999999999999998788999999754
No 339
>PRK06180 short chain dehydrogenase; Provisional
Probab=25.11 E-value=1.1e+02 Score=28.19 Aligned_cols=33 Identities=12% Similarity=-0.081 Sum_probs=24.5
Q ss_pred ceEEEecCCCccCHHHHHHHHHHHHhCCCCcEEEEEeC
Q 044031 3 KTIALYPGPAFHHMISMVELGKLILQHRSDVSITILVP 40 (468)
Q Consensus 3 ~~Iv~~~~~~~GHv~P~l~LA~~L~~~G~~h~Vt~~~~ 40 (468)
.+.++++ |+.|.+ ..+|+++|+++| ++|+.+.-
T Consensus 4 ~~~vlVt-Gasggi--G~~la~~l~~~G--~~V~~~~r 36 (277)
T PRK06180 4 MKTWLIT-GVSSGF--GRALAQAALAAG--HRVVGTVR 36 (277)
T ss_pred CCEEEEe-cCCChH--HHHHHHHHHhCc--CEEEEEeC
Confidence 3566666 555644 778899999999 99988843
No 340
>cd01832 SGNH_hydrolase_like_1 Members of the SGNH-hydrolase superfamily, a diverse family of lipases and esterases. The tertiary fold of the enzyme is substantially different from that of the alpha/beta hydrolase family and unique among all known hydrolases; its active site closely resembles the Ser-His-Asp(Glu) triad from other serine hydrolases, but may lack the carboxlic acid. Myxobacterial members of this subfamily have been reported to be involved in adventurous gliding motility.
Probab=25.05 E-value=1.7e+02 Score=24.81 Aligned_cols=36 Identities=19% Similarity=0.223 Sum_probs=25.8
Q ss_pred eEEeccCCCcCCC--------HHHHHHHHHHHHhCCCcEEEEEe
Q 044031 272 VVFLCFGSRGTFS--------APQLKEIAIGLERSNQRFLWVVR 307 (468)
Q Consensus 272 ~v~vs~GS~~~~~--------~~~~~~~~~al~~~~~~~l~~~~ 307 (468)
+|+|.+|+..... .+.+..+++.++..+.+++|..-
T Consensus 70 ~vii~~G~ND~~~~~~~~~~~~~~~~~~i~~i~~~~~~vil~~~ 113 (185)
T cd01832 70 LVTLLAGGNDILRPGTDPDTYRADLEEAVRRLRAAGARVVVFTI 113 (185)
T ss_pred EEEEeccccccccCCCCHHHHHHHHHHHHHHHHhCCCEEEEecC
Confidence 9999999985433 34456677777777888887654
No 341
>COG3265 GntK Gluconate kinase [Carbohydrate transport and metabolism]
Probab=24.99 E-value=1.2e+02 Score=25.50 Aligned_cols=62 Identities=15% Similarity=0.210 Sum_probs=40.6
Q ss_pred EecCCcchHHHHHHhCCcEEecccc-cchhhHHHHHHhhcceeeeeccCCcccccCCCCccccHHHHHHHHHHHhc
Q 044031 351 VTHCGWSSVVEAVTYGVPMIAWPLY-AEQFLNSVALVQEMKVAMPMFLNGEEETIGNGEGVVSAERVEERVRELMM 425 (468)
Q Consensus 351 ithgG~~s~~eal~~GvP~v~~P~~-~DQ~~na~~~~~~~g~g~~~~~~~~~~~~~~~~~~~~~~~l~~av~~~l~ 425 (468)
|+-||-.|+.++++. .+.+++. +|-.-=..-+ ++++.|+.+. .+++...-+.|.+++.....
T Consensus 3 VsG~GKStvg~~lA~---~lg~~fidGDdlHp~aNi-~KM~~GiPL~---------DdDR~pWL~~l~~~~~~~~~ 65 (161)
T COG3265 3 VSGSGKSTVGSALAE---RLGAKFIDGDDLHPPANI-EKMSAGIPLN---------DDDRWPWLEALGDAAASLAQ 65 (161)
T ss_pred CCccCHHHHHHHHHH---HcCCceecccccCCHHHH-HHHhCCCCCC---------cchhhHHHHHHHHHHHHhhc
Confidence 567899999999987 3457764 4554444445 4678898886 23444555667777666544
No 342
>PRK09177 xanthine-guanine phosphoribosyltransferase; Validated
Probab=24.98 E-value=1.4e+02 Score=25.12 Aligned_cols=22 Identities=9% Similarity=0.040 Sum_probs=19.1
Q ss_pred CccEEEe------cCcHHHhhhCCCCeE
Q 044031 108 KILSFII------TSTTSFSYHPNIPTY 129 (468)
Q Consensus 108 ~pD~vI~------~~~~~vA~~lgIP~i 129 (468)
++|+||+ .++..+++.||+|.+
T Consensus 31 ~~d~vvgv~~GG~~fa~~L~~~L~~~~v 58 (156)
T PRK09177 31 QWKGIIAVTRGGLVPAAILARELGIRLV 58 (156)
T ss_pred CCCEEEEEecCCeehHHHHHHHcCCCce
Confidence 6899999 678889999999975
No 343
>PRK14076 pnk inorganic polyphosphate/ATP-NAD kinase; Provisional
Probab=24.87 E-value=1.3e+02 Score=31.60 Aligned_cols=53 Identities=17% Similarity=0.288 Sum_probs=37.2
Q ss_pred cceEEecCCcchHHHHHHh----CCcEEecccccchhhHHHHHHhhcceeeeeccCCcccccCCCCccccHHHHHHHHHH
Q 044031 347 VGGFVTHCGWSSVVEAVTY----GVPMIAWPLYAEQFLNSVALVQEMKVAMPMFLNGEEETIGNGEGVVSAERVEERVRE 422 (468)
Q Consensus 347 ~~~~ithgG~~s~~eal~~----GvP~v~~P~~~DQ~~na~~~~~~~g~g~~~~~~~~~~~~~~~~~~~~~~~l~~av~~ 422 (468)
++++|+-||=||++.+.+. ++|++++-... +|.... ++.+++.+++++
T Consensus 349 ~dlvi~lGGDGT~L~aa~~~~~~~~PilGin~G~--------------lGFL~~--------------~~~~~~~~~l~~ 400 (569)
T PRK14076 349 ISHIISIGGDGTVLRASKLVNGEEIPIICINMGT--------------VGFLTE--------------FSKEEIFKAIDS 400 (569)
T ss_pred CCEEEEECCcHHHHHHHHHhcCCCCCEEEEcCCC--------------CCcCcc--------------cCHHHHHHHHHH
Confidence 4559999999999999773 78888875421 233222 566777777777
Q ss_pred HhcCc
Q 044031 423 LMMGS 427 (468)
Q Consensus 423 ~l~~~ 427 (468)
++++.
T Consensus 401 ~~~g~ 405 (569)
T PRK14076 401 IISGE 405 (569)
T ss_pred HHcCC
Confidence 77654
No 344
>PRK10422 lipopolysaccharide core biosynthesis protein; Provisional
Probab=24.85 E-value=2.3e+02 Score=27.44 Aligned_cols=26 Identities=19% Similarity=0.241 Sum_probs=21.5
Q ss_pred CccEEEe--cCcHHHhhhCCCCeEEEec
Q 044031 108 KILSFII--TSTTSFSYHPNIPTYTYFN 133 (468)
Q Consensus 108 ~pD~vI~--~~~~~vA~~lgIP~i~~~~ 133 (468)
+.|++|+ +...-+|..+|+|++.++.
T Consensus 262 ~a~l~v~nDSGp~HlAaA~g~P~v~lfG 289 (352)
T PRK10422 262 HAQLFIGVDSAPAHIAAAVNTPLICLFG 289 (352)
T ss_pred hCCEEEecCCHHHHHHHHcCCCEEEEEC
Confidence 7799999 5555599999999998765
No 345
>PLN03064 alpha,alpha-trehalose-phosphate synthase (UDP-forming); Provisional
Probab=24.75 E-value=1e+03 Score=26.76 Aligned_cols=72 Identities=13% Similarity=0.073 Sum_probs=42.9
Q ss_pred ecCCCCHHh---hhCccCcceEEe---cCCcchH-HHHHHhCC---cEEecccccchhhHHHHHHhhcc-eeeeeccCCc
Q 044031 332 VKSWAPQST---ILGHESVGGFVT---HCGWSSV-VEAVTYGV---PMIAWPLYAEQFLNSVALVQEMK-VAMPMFLNGE 400 (468)
Q Consensus 332 v~~~~pq~~---il~~~~~~~~it---hgG~~s~-~eal~~Gv---P~v~~P~~~DQ~~na~~~~~~~g-~g~~~~~~~~ 400 (468)
+...+|+.+ ++.-+++ |+- +-|+|-+ .|+++++. -+++++- +--|. +.+| -|+.+++
T Consensus 444 ~~~~l~~eeL~AlY~~ADV--~lvTslrDGmNLva~Eyva~~~~~~GvLILSE----faGaa---~~L~~~AllVNP--- 511 (934)
T PLN03064 444 LDRSLDFHALCALYAVTDV--ALVTSLRDGMNLVSYEFVACQDSKKGVLILSE----FAGAA---QSLGAGAILVNP--- 511 (934)
T ss_pred eccCCCHHHHHHHHHhCCE--EEeCccccccCchHHHHHHhhcCCCCCeEEeC----CCchH---HHhCCceEEECC---
Confidence 334466654 3444555 443 4588854 59999954 2222232 22222 2344 4677876
Q ss_pred ccccCCCCccccHHHHHHHHHHHhc
Q 044031 401 EETIGNGEGVVSAERVEERVRELMM 425 (468)
Q Consensus 401 ~~~~~~~~~~~~~~~l~~av~~~l~ 425 (468)
.+.+.++++|.+.|+
T Consensus 512 ----------~D~~~vA~AI~~AL~ 526 (934)
T PLN03064 512 ----------WNITEVAASIAQALN 526 (934)
T ss_pred ----------CCHHHHHHHHHHHHh
Confidence 788999999999987
No 346
>PRK06048 acetolactate synthase 3 catalytic subunit; Reviewed
Probab=24.71 E-value=1.3e+02 Score=31.49 Aligned_cols=26 Identities=27% Similarity=0.367 Sum_probs=21.9
Q ss_pred ceEEecCCcc------hHHHHHHhCCcEEecc
Q 044031 348 GGFVTHCGWS------SVVEAVTYGVPMIAWP 373 (468)
Q Consensus 348 ~~~ithgG~~------s~~eal~~GvP~v~~P 373 (468)
+++++|.|-| ++.+|...++|+|++-
T Consensus 72 ~v~~~t~GpG~~n~~~gl~~A~~~~~Pvl~i~ 103 (561)
T PRK06048 72 GVCVATSGPGATNLVTGIATAYMDSVPIVALT 103 (561)
T ss_pred eEEEECCCCcHHHHHHHHHHHhhcCCCEEEEe
Confidence 3488888866 7889999999999994
No 347
>PRK06882 acetolactate synthase 3 catalytic subunit; Validated
Probab=24.67 E-value=1.3e+02 Score=31.59 Aligned_cols=27 Identities=26% Similarity=0.401 Sum_probs=22.5
Q ss_pred cceEEecCCcc------hHHHHHHhCCcEEecc
Q 044031 347 VGGFVTHCGWS------SVVEAVTYGVPMIAWP 373 (468)
Q Consensus 347 ~~~~ithgG~~------s~~eal~~GvP~v~~P 373 (468)
.+++++|.|-| ++.+|...++|+|++-
T Consensus 68 ~gv~~~t~GpG~~N~l~~i~~A~~~~~Pvlvi~ 100 (574)
T PRK06882 68 VGCVLVTSGPGATNAITGIATAYTDSVPLVILS 100 (574)
T ss_pred CeEEEECCCccHHHHHHHHHHHhhcCCCEEEEe
Confidence 44488888876 6889999999999995
No 348
>COG1484 DnaC DNA replication protein [DNA replication, recombination, and repair]
Probab=24.55 E-value=1.2e+02 Score=27.97 Aligned_cols=36 Identities=14% Similarity=0.322 Sum_probs=30.9
Q ss_pred eEEEecCCCccCHHHHHHHHHHHHhCCCCcEEEEEeCC
Q 044031 4 TIALYPGPAFHHMISMVELGKLILQHRSDVSITILVPS 41 (468)
Q Consensus 4 ~Iv~~~~~~~GHv~P~l~LA~~L~~~G~~h~Vt~~~~~ 41 (468)
-++++--|+.|-..=..+||.+|..+| +.|+|++..
T Consensus 107 nl~l~G~~G~GKThLa~Ai~~~l~~~g--~sv~f~~~~ 142 (254)
T COG1484 107 NLVLLGPPGVGKTHLAIAIGNELLKAG--ISVLFITAP 142 (254)
T ss_pred cEEEECCCCCcHHHHHHHHHHHHHHcC--CeEEEEEHH
Confidence 377788888888888999999999999 999999543
No 349
>COG2210 Peroxiredoxin family protein [General function prediction only]
Probab=24.48 E-value=1.4e+02 Score=24.52 Aligned_cols=31 Identities=3% Similarity=0.059 Sum_probs=26.9
Q ss_pred ecCCCccCHHHHHHHHHHHHhCCCCcEEEEEeC
Q 044031 8 YPGPAFHHMISMVELGKLILQHRSDVSITILVP 40 (468)
Q Consensus 8 ~~~~~~GHv~P~l~LA~~L~~~G~~h~Vt~~~~ 40 (468)
+..+..--++|..-++...+..| ++|+++.+
T Consensus 9 l~SG~~dk~~~a~iias~A~A~G--~EV~VF~T 39 (137)
T COG2210 9 LASGTLDKAYAALIIASGAAAMG--YEVTVFFT 39 (137)
T ss_pred EeCCCHHHHHHHHHHHHHHHHcC--CeEEEEEe
Confidence 33478888999999999999999 99999955
No 350
>TIGR01744 XPRTase xanthine phosphoribosyltransferase. This model represent a xanthine-specific phosphoribosyltransferase of Bacillus subtilis and closely related proteins from other species, mostly from other Gram-positive bacteria. The adjacent gene is a xanthine transporter; B. subtilis can import xanthine for the purine salvage pathway or for catabolism to obtain nitrogen.
Probab=24.47 E-value=1.1e+02 Score=26.92 Aligned_cols=26 Identities=8% Similarity=0.060 Sum_probs=21.3
Q ss_pred CccEEEe------cCcHHHhhhCCCCeEEEec
Q 044031 108 KILSFII------TSTTSFSYHPNIPTYTYFN 133 (468)
Q Consensus 108 ~pD~vI~------~~~~~vA~~lgIP~i~~~~ 133 (468)
++|+|++ +.+..+|.++|+|.+...-
T Consensus 50 ~~d~Vv~~ea~Gi~la~~lA~~Lg~p~v~vRK 81 (191)
T TIGR01744 50 GITKIVTIEASGIAPAIMTGLKLGVPVVFARK 81 (191)
T ss_pred CCCEEEEEccccHHHHHHHHHHHCCCEEEEEe
Confidence 7999998 5577789999999987643
No 351
>PRK06456 acetolactate synthase catalytic subunit; Reviewed
Probab=24.44 E-value=1.5e+02 Score=31.15 Aligned_cols=27 Identities=22% Similarity=0.207 Sum_probs=22.2
Q ss_pred cceEEecCCcc------hHHHHHHhCCcEEecc
Q 044031 347 VGGFVTHCGWS------SVVEAVTYGVPMIAWP 373 (468)
Q Consensus 347 ~~~~ithgG~~------s~~eal~~GvP~v~~P 373 (468)
.+++++|.|-| .+.+|...++|+|++-
T Consensus 69 ~gv~~~t~GpG~~N~l~gi~~A~~~~~Pvl~i~ 101 (572)
T PRK06456 69 PGVCTATSGPGTTNLVTGLITAYWDSSPVIAIT 101 (572)
T ss_pred CEEEEeCCCCCHHHHHHHHHHHHhhCCCEEEEe
Confidence 33488888866 6789999999999995
No 352
>PRK07524 hypothetical protein; Provisional
Probab=24.33 E-value=1.5e+02 Score=30.81 Aligned_cols=26 Identities=19% Similarity=0.238 Sum_probs=21.6
Q ss_pred ceEEecCCcc------hHHHHHHhCCcEEecc
Q 044031 348 GGFVTHCGWS------SVVEAVTYGVPMIAWP 373 (468)
Q Consensus 348 ~~~ithgG~~------s~~eal~~GvP~v~~P 373 (468)
++++.|.|-| ++.+|...++|+|++-
T Consensus 66 gv~~~t~GpG~~n~~~gi~~A~~~~~Pvl~i~ 97 (535)
T PRK07524 66 GVCFIITGPGMTNIATAMGQAYADSIPMLVIS 97 (535)
T ss_pred eEEEECCCccHHHHHHHHHHHHhcCCCEEEEe
Confidence 3488888876 7889999999999984
No 353
>TIGR01498 folK 2-amino-4-hydroxy-6-hydroxymethyldihydropteridine pyrophosphokinase. This model describes the folate biosynthesis enzyme 2-amino-4-hydroxy-6-hydroxymethyldihydropteridine pyrophosphokinase. Alternate names include 6-hydroxymethyl-7,8-dihydropterin diphosphokinase and 7,8-dihydro-6-hydroxymethylpterin pyrophosphokinase (HPPK). The extreme C-terminal region, of typically eight to thirty residues, is not included in the model. This enzyme may be found as a fusion protein with other enzymes of folate biosynthesis.
Probab=24.33 E-value=74 Score=25.79 Aligned_cols=28 Identities=14% Similarity=0.140 Sum_probs=21.1
Q ss_pred EEeccCCCcCCCHHHHHHHHHHHHhCCC
Q 044031 273 VFLCFGSRGTFSAPQLKEIAIGLERSNQ 300 (468)
Q Consensus 273 v~vs~GS~~~~~~~~~~~~~~al~~~~~ 300 (468)
||+++||......+.+...+..|++...
T Consensus 1 ~~i~lGSN~g~~~~~l~~A~~~L~~~~~ 28 (127)
T TIGR01498 1 AYIALGSNLGDRLKNLRAALAALAALPV 28 (127)
T ss_pred CEEEEeCCcHhHHHHHHHHHHHHhcCCc
Confidence 5899999976566667777788876553
No 354
>KOG1344 consensus Predicted histone deacetylase [Chromatin structure and dynamics]
Probab=24.21 E-value=1.6e+02 Score=26.48 Aligned_cols=19 Identities=11% Similarity=-0.120 Sum_probs=13.9
Q ss_pred HHhhhCCCCeEEEecchhH
Q 044031 119 SFSYHPNIPTYTYFNSCAS 137 (468)
Q Consensus 119 ~vA~~lgIP~i~~~~~~~~ 137 (468)
..++.+|||.+.+.+.++.
T Consensus 285 r~~R~~~iPvvMltSGGY~ 303 (324)
T KOG1344|consen 285 RTFRALGIPVVMLTSGGYL 303 (324)
T ss_pred HHHHHcCCcEEEEecCcee
Confidence 3567789999888776544
No 355
>PF00282 Pyridoxal_deC: Pyridoxal-dependent decarboxylase conserved domain; InterPro: IPR002129 Pyridoxal phosphate is the active form of vitamin B6 (pyridoxine or pyridoxal). Pyridoxal 5'-phosphate (PLP) is a versatile catalyst, acting as a coenzyme in a multitude of reactions, including decarboxylation, deamination and transamination [, , ]. PLP-dependent enzymes are primarily involved in the biosynthesis of amino acids and amino acid-derived metabolites, but they are also found in the biosynthetic pathways of amino sugars and in the synthesis or catabolism of neurotransmitters; pyridoxal phosphate can also inhibit DNA polymerases and several steroid receptors []. Inadequate levels of pyridoxal phosphate in the brain can cause neurological dysfunction, particularly epilepsy []. PLP enzymes exist in their resting state as a Schiff base, the aldehyde group of PLP forming a linkage with the epsilon-amino group of an active site lysine residue on the enzyme. The alpha-amino group of the substrate displaces the lysine epsilon-amino group, in the process forming a new aldimine with the substrate. This aldimine is the common central intermediate for all PLP-catalysed reactions, enzymatic and non-enzymatic []. A number of pyridoxal-dependent decarboxylases share regions of sequence similarity, particularly in the vicinity of a conserved lysine residue, which provides the attachment site for the pyridoxal-phosphate (PLP) group [, ]. Among these enzymes are aromatic-L-amino-acid decarboxylase (L-dopa decarboxylase or tryptophan decarboxylase), which catalyses the decarboxylation of tryptophan to tryptamine []; tyrosine decarboxylase, which converts tyrosine into tyramine; and histidine decarboxylase, which catalyses the decarboxylation of histidine to histamine []. These enzymes belong to the group II decarboxylases [, ].; GO: 0016831 carboxy-lyase activity, 0030170 pyridoxal phosphate binding, 0019752 carboxylic acid metabolic process; PDB: 3MC6_A 1XEY_A 1ES0_B 2OKK_A 2JIS_B 2QMA_A 3MAF_B 3MAD_B 3MAU_A 3MBB_A ....
Probab=24.03 E-value=1.5e+02 Score=29.12 Aligned_cols=71 Identities=17% Similarity=0.193 Sum_probs=46.6
Q ss_pred cceEEecCCcchHHHHHHh-----------------CCcEEecccccchhhHHHHHHhhcceeeeeccCCcccccCCCCc
Q 044031 347 VGGFVTHCGWSSVVEAVTY-----------------GVPMIAWPLYAEQFLNSVALVQEMKVAMPMFLNGEEETIGNGEG 409 (468)
Q Consensus 347 ~~~~ithgG~~s~~eal~~-----------------GvP~v~~P~~~DQ~~na~~~~~~~g~g~~~~~~~~~~~~~~~~~ 409 (468)
.++++|.||..+.+-|+.+ +.|.|.++-.+ ++-+.+.. ..+|+|++.-+ -.+++
T Consensus 104 ~~G~~t~Ggt~anl~al~aAR~~~~~~~~~~~~~~~~~~~i~~s~~a-H~S~~Kaa-~~lGlg~~~I~-------~~~~~ 174 (373)
T PF00282_consen 104 AGGVFTSGGTEANLYALLAARERALPRSKAKGVEEIPKPVIYVSEQA-HYSIEKAA-RILGLGVRKIP-------TDEDG 174 (373)
T ss_dssp SEEEEESSHHHHHHHHHHHHHHHHHHHHHHHTTTHCSSEEEEEETTS--THHHHHH-HHTTSEEEEE--------BBTTS
T ss_pred CceeEeccchHHHHHHHHHHHHHHhhhhhhccccccccccccccccc-ccHHHHhc-ceeeeEEEEec-------CCcch
Confidence 5679999998888777533 25677776545 35554444 57899966543 12345
Q ss_pred cccHHHHHHHHHHHhcC
Q 044031 410 VVSAERVEERVRELMMG 426 (468)
Q Consensus 410 ~~~~~~l~~av~~~l~~ 426 (468)
.++.++|+++|++...+
T Consensus 175 ~md~~~L~~~l~~~~~~ 191 (373)
T PF00282_consen 175 RMDIEALEKALEKDIAN 191 (373)
T ss_dssp SB-HHHHHHHHHHHHHT
T ss_pred hhhHHHhhhhhcccccc
Confidence 58889999998877544
No 356
>cd00861 ProRS_anticodon_short ProRS Prolyl-anticodon binding domain, short version found predominantly in bacteria. ProRS belongs to class II aminoacyl-tRNA synthetases (aaRS). This alignment contains the anticodon binding domain, which is responsible for specificity in tRNA-binding, so that the activated amino acid is transferred to a ribose 3' OH group of the appropriate tRNA only.
Probab=24.02 E-value=1.4e+02 Score=22.05 Aligned_cols=33 Identities=9% Similarity=-0.028 Sum_probs=26.6
Q ss_pred eEEEecCCCc--cCHHHHHHHHHHHHhCCCCcEEEEE
Q 044031 4 TIALYPGPAF--HHMISMVELGKLILQHRSDVSITIL 38 (468)
Q Consensus 4 ~Iv~~~~~~~--GHv~P~l~LA~~L~~~G~~h~Vt~~ 38 (468)
+|+++|.... .+..-.+.++..|+..| ..|.+-
T Consensus 3 qv~i~p~~~~~~~~~~~a~~la~~Lr~~g--~~v~~d 37 (94)
T cd00861 3 DVVIIPMNMKDEVQQELAEKLYAELQAAG--VDVLLD 37 (94)
T ss_pred EEEEEEcCCCcHHHHHHHHHHHHHHHHCC--CEEEEE
Confidence 5788886643 56778899999999999 888775
No 357
>cd01452 VWA_26S_proteasome_subunit 26S proteasome plays a major role in eukaryotic protein breakdown, especially for ubiquitin-tagged proteins. It is an ATP-dependent protease responsible for the bulk of non-lysosomal proteolysis in eukaryotes, often using covalent modification of proteins by ubiquitylation. It consists of a 20S proteolytic core particle (CP) and a 19S regulatory particle (RP). The CP is an ATP independent peptidase consisting of hydrolyzing activities. One or both ends of CP carry the RP that confers both ubiquitin and ATP dependence to the 26S proteosome. The RP's proposed functions include recognition of substrates and translocation of these to CP for proteolysis. The RP can dissociate into a stable lid and base subcomplexes. The base is composed of three non-ATPase subunits (Rpn 1, 2 and 10). A single residue in the vWA domain of Rpn10 has been implicated to be responsible for stabilizing the lid-base association.
Probab=23.94 E-value=4.5e+02 Score=22.96 Aligned_cols=64 Identities=17% Similarity=0.192 Sum_probs=38.6
Q ss_pred EEEecCCCccCHHHHHHHHHHHHhCCCCcEEEEEeCCCCC-CchhhhhhhhccccCCCCCeeEEEcCCC
Q 044031 5 IALYPGPAFHHMISMVELGKLILQHRSDVSITILVPSMPL-EESKTCSYINSISHRLNPIISFYYLPAI 72 (468)
Q Consensus 5 Iv~~~~~~~GHv~P~l~LA~~L~~~G~~h~Vt~~~~~~~~-~~~~~~~~~~~~~~~~~~~i~~~~i~~~ 72 (468)
|+|+..+..-|-.=...+++.|++.| .+|.+++..... +...+..+++... ...+=+|+.+|..
T Consensus 111 vi~v~S~~~~d~~~i~~~~~~lkk~~--I~v~vI~~G~~~~~~~~l~~~~~~~~--~~~~s~~~~~~~~ 175 (187)
T cd01452 111 VAFVGSPIEEDEKDLVKLAKRLKKNN--VSVDIINFGEIDDNTEKLTAFIDAVN--GKDGSHLVSVPPG 175 (187)
T ss_pred EEEEecCCcCCHHHHHHHHHHHHHcC--CeEEEEEeCCCCCCHHHHHHHHHHhc--CCCCceEEEeCCC
Confidence 66677776777666678888888888 888887654332 3333344444432 2223456666654
No 358
>PRK05708 2-dehydropantoate 2-reductase; Provisional
Probab=23.83 E-value=87 Score=29.73 Aligned_cols=33 Identities=6% Similarity=0.154 Sum_probs=27.7
Q ss_pred CcceEEEecCCCccCHHHHHHHHHHHHhCCCCcEEEEEeC
Q 044031 1 MKKTIALYPGPAFHHMISMVELGKLILQHRSDVSITILVP 40 (468)
Q Consensus 1 m~~~Iv~~~~~~~GHv~P~l~LA~~L~~~G~~h~Vt~~~~ 40 (468)
|++||+++-.|+-|=+ +|-.|++.| ++||++.-
T Consensus 1 ~~m~I~IiGaGaiG~~-----~a~~L~~~G--~~V~lv~r 33 (305)
T PRK05708 1 MSMTWHILGAGSLGSL-----WACRLARAG--LPVRLILR 33 (305)
T ss_pred CCceEEEECCCHHHHH-----HHHHHHhCC--CCeEEEEe
Confidence 6778999999998864 566788999 99999954
No 359
>TIGR02193 heptsyl_trn_I lipopolysaccharide heptosyltransferase I. This family consists of examples of ADP-heptose:LPS heptosyltransferase I, an enzyme of LPS inner core region biosynthesis. LPS, composed of lipid A, a core region, and O antigen, is found in the outer membrane of Gram-negative bacteria.
Probab=23.81 E-value=90 Score=29.68 Aligned_cols=39 Identities=18% Similarity=0.125 Sum_probs=35.3
Q ss_pred eEEEecCCCccCHHHHHHHHHHHHhCCCCcEEEEEeCCC
Q 044031 4 TIALYPGPAFHHMISMVELGKLILQHRSDVSITILVPSM 42 (468)
Q Consensus 4 ~Iv~~~~~~~GHv~P~l~LA~~L~~~G~~h~Vt~~~~~~ 42 (468)
+|+++-...-|++.=...+.+.|+++-|+.+|++++...
T Consensus 1 ~ILiir~~~iGD~vl~~p~l~~Lr~~~P~a~I~~l~~~~ 39 (319)
T TIGR02193 1 RILIVKTSSLGDVIHTLPALTDIKRALPDVEIDWVVEEG 39 (319)
T ss_pred CEEEEecccHHHHHHHHHHHHHHHHhCCCCEEEEEEChh
Confidence 488888999999999999999999998889999997644
No 360
>PRK06029 3-octaprenyl-4-hydroxybenzoate carboxy-lyase; Provisional
Probab=23.78 E-value=1.2e+02 Score=26.49 Aligned_cols=38 Identities=13% Similarity=0.098 Sum_probs=29.7
Q ss_pred cceEEEecCCCccCHHHHHHHHHHHHh-CCCCcEEEEEeCCC
Q 044031 2 KKTIALYPGPAFHHMISMVELGKLILQ-HRSDVSITILVPSM 42 (468)
Q Consensus 2 ~~~Iv~~~~~~~GHv~P~l~LA~~L~~-~G~~h~Vt~~~~~~ 42 (468)
+++|++.-.|+-| .+=...|.++|.+ .| ++|.++.++.
T Consensus 1 ~k~IllgVTGsia-a~ka~~l~~~L~k~~g--~~V~vv~T~~ 39 (185)
T PRK06029 1 MKRLIVGISGASG-AIYGVRLLQVLRDVGE--IETHLVISQA 39 (185)
T ss_pred CCEEEEEEECHHH-HHHHHHHHHHHHhhcC--CeEEEEECHH
Confidence 1467777777777 6669999999999 59 9999996654
No 361
>PRK06505 enoyl-(acyl carrier protein) reductase; Provisional
Probab=23.77 E-value=1.3e+02 Score=27.88 Aligned_cols=35 Identities=17% Similarity=0.163 Sum_probs=27.1
Q ss_pred CcceEEEecCCCccCHHHHHHHHHHHHhCCCCcEEEEE
Q 044031 1 MKKTIALYPGPAFHHMISMVELGKLILQHRSDVSITIL 38 (468)
Q Consensus 1 m~~~Iv~~~~~~~GHv~P~l~LA~~L~~~G~~h~Vt~~ 38 (468)
|+.++++++.++.++= =..++|++|+++| ++|.++
T Consensus 5 l~~k~~lVTGas~~~G-IG~aiA~~la~~G--a~V~~~ 39 (271)
T PRK06505 5 MQGKRGLIMGVANDHS-IAWGIAKQLAAQG--AELAFT 39 (271)
T ss_pred cCCCEEEEeCCCCCCc-HHHHHHHHHHhCC--CEEEEe
Confidence 3457999998775211 3789999999999 999886
No 362
>PRK13196 pyrrolidone-carboxylate peptidase; Provisional
Probab=23.74 E-value=2.9e+02 Score=24.63 Aligned_cols=26 Identities=15% Similarity=0.111 Sum_probs=19.9
Q ss_pred ceEEEecCCCcc--CHHHHHHHHHHHHh
Q 044031 3 KTIALYPGPAFH--HMISMVELGKLILQ 28 (468)
Q Consensus 3 ~~Iv~~~~~~~G--Hv~P~l~LA~~L~~ 28 (468)
++|++.-|.-.| .+||--.++++|..
T Consensus 2 ~~ILvTGF~PF~~~~~NPS~~~~~~L~~ 29 (211)
T PRK13196 2 PTLLLTGFEPFHTHPVNPSAQAAQALNG 29 (211)
T ss_pred CEEEEEeecCCCCCCCCcHHHHHHhccc
Confidence 578888775444 48999999999954
No 363
>PF13499 EF-hand_7: EF-hand domain pair; PDB: 1TCF_A 2TN4_A 1TN4_A 1A2X_A 2CT9_B 2OTG_B 2OS8_B 1SNL_A 3O4Y_A 3J04_E ....
Probab=23.70 E-value=91 Score=21.29 Aligned_cols=54 Identities=20% Similarity=0.359 Sum_probs=32.3
Q ss_pred CCCccccHHHHHHHHHHHhcCchhHHHHHHHHHHHHHHHHhhcCCCCCChHHHHHHHHHH
Q 044031 406 NGEGVVSAERVEERVRELMMGSEGKALRERSLEMRMMAATAWNNNDGGSSFTAFSNLFDL 465 (468)
Q Consensus 406 ~~~~~~~~~~l~~av~~~l~~~~~~~~~~~a~~l~~~~~~a~~~~~~g~~~~~~~~~~~~ 465 (468)
.++|.++.+++.+.++.+..... .+........+-+.++ .+++..-++++|++.
T Consensus 12 d~~G~i~~~el~~~~~~~~~~~~----~~~~~~~~~~~~~~~D--~d~dG~i~~~Ef~~~ 65 (66)
T PF13499_consen 12 DGDGYISKEELRRALKHLGRDMS----DEESDEMIDQIFREFD--TDGDGRISFDEFLNF 65 (66)
T ss_dssp TSSSEEEHHHHHHHHHHTTSHST----HHHHHHHHHHHHHHHT--TTSSSSEEHHHHHHH
T ss_pred CccCCCCHHHHHHHHHHhccccc----HHHHHHHHHHHHHHhC--CCCcCCCcHHHHhcc
Confidence 34688999999999998875331 2222223333333456 455555667776653
No 364
>PRK05562 precorrin-2 dehydrogenase; Provisional
Probab=23.68 E-value=5.5e+02 Score=23.17 Aligned_cols=142 Identities=10% Similarity=0.090 Sum_probs=67.2
Q ss_pred ceEEeccCCCcCCCHHHHHHHHHHHHhCCCcEEEEEeCCCCccccCCChhHHhhccCCCeEecC-CCCHHhhhCccCcce
Q 044031 271 SVVFLCFGSRGTFSAPQLKEIAIGLERSNQRFLWVVRNPSNAAEAELPEGFLERTKERGLVVKS-WAPQSTILGHESVGG 349 (468)
Q Consensus 271 ~~v~vs~GS~~~~~~~~~~~~~~al~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~-~~pq~~il~~~~~~~ 349 (468)
.++.|+.|... ..=+..|...+..+.++... +-+.+.+......+.+.. .....+ |..+.+
T Consensus 27 ~VLVVGGG~VA-------~RK~~~Ll~~gA~VtVVap~--------i~~el~~l~~~~~i~~~~r~~~~~d-l~g~~L-- 88 (223)
T PRK05562 27 KVLIIGGGKAA-------FIKGKTFLKKGCYVYILSKK--------FSKEFLDLKKYGNLKLIKGNYDKEF-IKDKHL-- 88 (223)
T ss_pred EEEEECCCHHH-------HHHHHHHHhCCCEEEEEcCC--------CCHHHHHHHhCCCEEEEeCCCChHH-hCCCcE--
Confidence 38888777664 22234555678777666543 222333222223333222 222223 444444
Q ss_pred EEecCCcchHHHHHHh-----CCcEEecccccchhhHHHH-----HHhhcceeeeeccCCcccccCCCCccccHHHHHHH
Q 044031 350 FVTHCGWSSVVEAVTY-----GVPMIAWPLYAEQFLNSVA-----LVQEMKVAMPMFLNGEEETIGNGEGVVSAERVEER 419 (468)
Q Consensus 350 ~ithgG~~s~~eal~~-----GvP~v~~P~~~DQ~~na~~-----~~~~~g~g~~~~~~~~~~~~~~~~~~~~~~~l~~a 419 (468)
+|.-.+--.+.+.++. |+++.++ |++..+.. + +.=++-+.+..+ .. .-.-+..|++.
T Consensus 89 ViaATdD~~vN~~I~~~a~~~~~lvn~v----d~p~~~dFi~PAiv-~rg~l~IaIST~-------G~-sP~lar~lR~~ 155 (223)
T PRK05562 89 IVIATDDEKLNNKIRKHCDRLYKLYIDC----SDYKKGLCIIPYQR-STKNFVFALNTK-------GG-SPKTSVFIGEK 155 (223)
T ss_pred EEECCCCHHHHHHHHHHHHHcCCeEEEc----CCcccCeEEeeeEE-ecCCEEEEEECC-------Cc-CcHHHHHHHHH
Confidence 7777776666665543 4454433 44333322 2 121233334331 11 11234568888
Q ss_pred HHHHhcCchhHHHHHHHHHHHHHHHH
Q 044031 420 VRELMMGSEGKALRERSLEMRMMAAT 445 (468)
Q Consensus 420 v~~~l~~~~~~~~~~~a~~l~~~~~~ 445 (468)
+++++ ++...+-+.+.++++.+++
T Consensus 156 ie~~l--~~~~~l~~~l~~~R~~vk~ 179 (223)
T PRK05562 156 VKNFL--KKYDDFIEYVTKIRNKAKK 179 (223)
T ss_pred HHHHH--HHHHHHHHHHHHHHHHHHh
Confidence 88888 2233455555555555443
No 365
>PRK10037 cell division protein; Provisional
Probab=23.57 E-value=1.3e+02 Score=27.43 Aligned_cols=39 Identities=8% Similarity=-0.043 Sum_probs=32.0
Q ss_pred CcceEEEecC-CCccCHHHHHHHHHHHHhCCCCcEEEEEeCCC
Q 044031 1 MKKTIALYPG-PAFHHMISMVELGKLILQHRSDVSITILVPSM 42 (468)
Q Consensus 1 m~~~Iv~~~~-~~~GHv~P~l~LA~~L~~~G~~h~Vt~~~~~~ 42 (468)
|| .|+++.. |+-|-..-...||..|+++| ++|.++-.++
T Consensus 1 ~~-~iav~n~KGGvGKTT~a~nLA~~La~~G--~rVLlID~D~ 40 (250)
T PRK10037 1 MA-ILGLQGVRGGVGTTSITAALAWSLQMLG--ENVLVIDACP 40 (250)
T ss_pred Cc-EEEEecCCCCccHHHHHHHHHHHHHhcC--CcEEEEeCCh
Confidence 65 4666655 89999999999999999999 9999994443
No 366
>PRK06725 acetolactate synthase 3 catalytic subunit; Validated
Probab=23.55 E-value=1.4e+02 Score=31.29 Aligned_cols=27 Identities=19% Similarity=0.342 Sum_probs=22.2
Q ss_pred cceEEecCCcc------hHHHHHHhCCcEEecc
Q 044031 347 VGGFVTHCGWS------SVVEAVTYGVPMIAWP 373 (468)
Q Consensus 347 ~~~~ithgG~~------s~~eal~~GvP~v~~P 373 (468)
.+++++|.|-| ++++|...++|+|++-
T Consensus 78 ~gv~~~t~GpG~~N~~~gla~A~~~~~Pvl~I~ 110 (570)
T PRK06725 78 VGVVFATSGPGATNLVTGLADAYMDSIPLVVIT 110 (570)
T ss_pred CeEEEECCCccHHHHHHHHHHHhhcCcCEEEEe
Confidence 44488888877 5789999999999994
No 367
>PRK13195 pyrrolidone-carboxylate peptidase; Provisional
Probab=23.54 E-value=2.3e+02 Score=25.57 Aligned_cols=27 Identities=0% Similarity=-0.186 Sum_probs=19.8
Q ss_pred cceEEEecCCCcc--CHHHHHHHHHHHHh
Q 044031 2 KKTIALYPGPAFH--HMISMVELGKLILQ 28 (468)
Q Consensus 2 ~~~Iv~~~~~~~G--Hv~P~l~LA~~L~~ 28 (468)
|++|++.-|+-.| -+||-..++++|..
T Consensus 1 m~~ILvTGF~PFgg~~~NPS~~~v~~L~~ 29 (222)
T PRK13195 1 MSKVLVTGFGPYGVTPVNPAQLTAEELDG 29 (222)
T ss_pred CCEEEEeeecCCCCCCcCchHHHHHhccc
Confidence 1458888775444 38999999999954
No 368
>TIGR02418 acolac_catab acetolactate synthase, catabolic. Acetolactate synthase (EC 2.2.1.6) combines two molecules of pyruvate to yield 2-acetolactate with the release of CO2. This reaction may be involved in either valine biosynthesis (biosynthetic) or conversion of pyruvate to acetoin and possibly to 2,3-butanediol (catabolic). The biosynthetic type, described by TIGR00118, is also capable of forming acetohydroxybutyrate from pyruvate and 2-oxobutyrate for isoleucine biosynthesis. The family described here, part of the same larger family of thiamine pyrophosphate-dependent enzymes (pfam00205, pfam02776) is the catabolic form, generally found associated with in species with acetolactate decarboxylase and usually found in the same operon. The model may not encompass all catabolic acetolactate synthases, but rather one particular clade in the larger TPP-dependent enzyme family.
Probab=23.49 E-value=1.5e+02 Score=30.83 Aligned_cols=28 Identities=21% Similarity=0.176 Sum_probs=22.8
Q ss_pred cceEEecCCcc------hHHHHHHhCCcEEeccc
Q 044031 347 VGGFVTHCGWS------SVVEAVTYGVPMIAWPL 374 (468)
Q Consensus 347 ~~~~ithgG~~------s~~eal~~GvP~v~~P~ 374 (468)
.+++++|.|-| ++.+|...++|+|++--
T Consensus 62 ~gv~~~t~GpG~~n~l~gl~~A~~~~~Pvl~I~G 95 (539)
T TIGR02418 62 PGVALVTSGPGCSNLVTGLATANSEGDPVVAIGG 95 (539)
T ss_pred ceEEEECCCCCHhHHHHHHHHHhhcCCCEEEEeC
Confidence 34488888866 78899999999999953
No 369
>TIGR01282 nifD nitrogenase molybdenum-iron protein alpha chain. Nitrogenase consists of alpha (NifD) and beta (NifK) subunits of the molybdenum-iron protein and an ATP-binding iron-sulfur protein (NifH). This model describes a large clade of NifD proteins, but excludes a lineage that contains putative NifD and NifD homologs from species with vanadium-dependent nitrogenases.
Probab=23.32 E-value=66 Score=32.74 Aligned_cols=33 Identities=9% Similarity=-0.077 Sum_probs=26.6
Q ss_pred HHHHHHHhhhcCCCccEEEe-cCcHHHhhhCCCCeEEE
Q 044031 95 NVFQALENISLTSKILSFII-TSTTSFSYHPNIPTYTY 131 (468)
Q Consensus 95 ~l~~ll~~~~~~~~pD~vI~-~~~~~vA~~lgIP~i~~ 131 (468)
.+.+++++. +||++|. .-...+|+++|||+.-+
T Consensus 395 el~~~i~~~----~pDl~ig~~~~~~~a~k~gIP~~~~ 428 (466)
T TIGR01282 395 EFEEFVEKL----KPDLVGSGIKEKYVFQKMGVPFRQM 428 (466)
T ss_pred HHHHHHHHh----CCCEEEecCCccceeeecCCCcccc
Confidence 455666666 9999999 77788999999998643
No 370
>TIGR01283 nifE nitrogenase molybdenum-iron cofactor biosynthesis protein NifE. This protein is part of the NifEN complex involved in biosynthesis of the molybdenum-iron cofactor used by the homologous NifDK complex of nitrogenase. In a few species, the protein is found as a NifEN fusion protein.
Probab=23.23 E-value=1e+02 Score=31.33 Aligned_cols=33 Identities=15% Similarity=0.108 Sum_probs=26.5
Q ss_pred HHHHHHHhhhcCCCccEEEe-cCcHHHhhhCCCCeEEE
Q 044031 95 NVFQALENISLTSKILSFII-TSTTSFSYHPNIPTYTY 131 (468)
Q Consensus 95 ~l~~ll~~~~~~~~pD~vI~-~~~~~vA~~lgIP~i~~ 131 (468)
.+.+.+++. +||++|. .....+|.++|||++.+
T Consensus 386 e~~~~i~~~----~pDl~ig~~~~~~~a~k~giP~i~~ 419 (456)
T TIGR01283 386 ELLKLLLEY----KADLLIAGGKERYTALKLGIPFCDI 419 (456)
T ss_pred HHHHHHhhc----CCCEEEEccchHHHHHhcCCCEEEc
Confidence 445556665 9999999 77888999999998864
No 371
>PRK08558 adenine phosphoribosyltransferase; Provisional
Probab=23.16 E-value=1.1e+02 Score=28.03 Aligned_cols=25 Identities=0% Similarity=-0.166 Sum_probs=21.1
Q ss_pred CCccEEEe------cCcHHHhhhCCCCeEEE
Q 044031 107 SKILSFII------TSTTSFSYHPNIPTYTY 131 (468)
Q Consensus 107 ~~pD~vI~------~~~~~vA~~lgIP~i~~ 131 (468)
.++|+|++ +.+..+|..||+|.+..
T Consensus 110 ~~~D~Vvtv~~~GI~lA~~lA~~L~~p~vi~ 140 (238)
T PRK08558 110 LRVDVVLTAATDGIPLAVAIASYFGADLVYA 140 (238)
T ss_pred CCCCEEEEECcccHHHHHHHHHHHCcCEEEE
Confidence 37899999 67888999999998864
No 372
>COG0665 DadA Glycine/D-amino acid oxidases (deaminating) [Amino acid transport and metabolism]
Probab=23.11 E-value=90 Score=30.49 Aligned_cols=32 Identities=16% Similarity=0.274 Sum_probs=27.8
Q ss_pred CcceEEEecCCCccCHHHHHHHHHHHHhCCCCcEEEEEe
Q 044031 1 MKKTIALYPGPAFHHMISMVELGKLILQHRSDVSITILV 39 (468)
Q Consensus 1 m~~~Iv~~~~~~~GHv~P~l~LA~~L~~~G~~h~Vt~~~ 39 (468)
|+.+|+++-.+..| +..|.+|+++| ++|+++-
T Consensus 3 ~~~~vvVIGgGi~G-----ls~A~~La~~G--~~V~vie 34 (387)
T COG0665 3 MKMDVVIIGGGIVG-----LSAAYYLAERG--ADVTVLE 34 (387)
T ss_pred CcceEEEECCcHHH-----HHHHHHHHHcC--CEEEEEe
Confidence 45689999888777 99999999999 9999993
No 373
>PF09547 Spore_IV_A: Stage IV sporulation protein A (spore_IV_A); InterPro: IPR014201 This entry is designated stage IV sporulation protein A. It acts in the mother cell compartment and plays a role in spore coat morphogenesis []. A comparative genome analysis of all sequenced genomes of Firmicutes shows that the proteins are strictly conserved among the sub-set of endospore-forming species.
Probab=23.03 E-value=2.7e+02 Score=27.88 Aligned_cols=75 Identities=20% Similarity=0.235 Sum_probs=56.6
Q ss_pred hhCccCcceEEecCCcc--------------hHHHHHHhCCcEEec-----ccccchhhHHHHHHhhcceeeeeccCCcc
Q 044031 341 ILGHESVGGFVTHCGWS--------------SVVEAVTYGVPMIAW-----PLYAEQFLNSVALVQEMKVAMPMFLNGEE 401 (468)
Q Consensus 341 il~~~~~~~~ithgG~~--------------s~~eal~~GvP~v~~-----P~~~DQ~~na~~~~~~~g~g~~~~~~~~~ 401 (468)
|-.|+-+|++||-=|.- ++.|--.-|+|.|++ |+..+-..-+..++++.++-+..--
T Consensus 141 I~dHSTIGiVVTTDGSi~dipRe~Y~eAEervI~ELk~igKPFvillNs~~P~s~et~~L~~eL~ekY~vpVlpvn---- 216 (492)
T PF09547_consen 141 ITDHSTIGIVVTTDGSITDIPRENYVEAEERVIEELKEIGKPFVILLNSTKPYSEETQELAEELEEKYDVPVLPVN---- 216 (492)
T ss_pred eccCCceeEEEecCCCccCCChHHHHHHHHHHHHHHHHhCCCEEEEEeCCCCCCHHHHHHHHHHHHHhCCcEEEee----
Confidence 45689999999988865 688889999999987 6666777778888766566644421
Q ss_pred cccCCCCccccHHHHHHHHHHHhc
Q 044031 402 ETIGNGEGVVSAERVEERVRELMM 425 (468)
Q Consensus 402 ~~~~~~~~~~~~~~l~~av~~~l~ 425 (468)
-.+ ++.+++.+-++++|-
T Consensus 217 ---c~~---l~~~DI~~Il~~vLy 234 (492)
T PF09547_consen 217 ---CEQ---LREEDITRILEEVLY 234 (492)
T ss_pred ---hHH---cCHHHHHHHHHHHHh
Confidence 134 899999999988863
No 374
>PRK01372 ddl D-alanine--D-alanine ligase; Reviewed
Probab=22.99 E-value=1.3e+02 Score=28.38 Aligned_cols=38 Identities=13% Similarity=0.082 Sum_probs=28.3
Q ss_pred CcceEEEecCC-CccCHH---HHHHHHHHHHhCCCCcEEEEEeC
Q 044031 1 MKKTIALYPGP-AFHHMI---SMVELGKLILQHRSDVSITILVP 40 (468)
Q Consensus 1 m~~~Iv~~~~~-~~GHv~---P~l~LA~~L~~~G~~h~Vt~~~~ 40 (468)
|+++|+++..+ +.=|-. -...+.+.|.++| |+|.++..
T Consensus 3 ~~~~v~~~~g~~~~~~~~~~~s~~~i~~al~~~g--~~v~~i~~ 44 (304)
T PRK01372 3 MFGKVAVLMGGTSAEREVSLNSGAAVLAALREAG--YDAHPIDP 44 (304)
T ss_pred CCcEEEEEeCCCCCCceEeHHhHHHHHHHHHHCC--CEEEEEec
Confidence 66789888854 333333 5688999999999 99999843
No 375
>PRK06732 phosphopantothenate--cysteine ligase; Validated
Probab=22.99 E-value=1.1e+02 Score=27.78 Aligned_cols=19 Identities=11% Similarity=0.120 Sum_probs=16.9
Q ss_pred HHHHHHHHHhCCCCcEEEEEe
Q 044031 19 MVELGKLILQHRSDVSITILV 39 (468)
Q Consensus 19 ~l~LA~~L~~~G~~h~Vt~~~ 39 (468)
..+||++|.++| ++|+++.
T Consensus 29 G~aLA~~L~~~G--~~V~li~ 47 (229)
T PRK06732 29 GKIIAETFLAAG--HEVTLVT 47 (229)
T ss_pred HHHHHHHHHhCC--CEEEEEE
Confidence 478899999999 9999985
No 376
>COG2085 Predicted dinucleotide-binding enzymes [General function prediction only]
Probab=22.89 E-value=1.3e+02 Score=26.73 Aligned_cols=34 Identities=15% Similarity=0.050 Sum_probs=24.0
Q ss_pred eEEEecCCCccCHHHHHHHHHHHHhCCCCcEEEEEeCCCCC
Q 044031 4 TIALYPGPAFHHMISMVELGKLILQHRSDVSITILVPSMPL 44 (468)
Q Consensus 4 ~Iv~~~~~~~GHv~P~l~LA~~L~~~G~~h~Vt~~~~~~~~ 44 (468)
++++.- .|++ .-.||++|+..| |+|++.+...+.
T Consensus 3 ~~~i~G---tGni--G~alA~~~a~ag--~eV~igs~r~~~ 36 (211)
T COG2085 3 IIAIIG---TGNI--GSALALRLAKAG--HEVIIGSSRGPK 36 (211)
T ss_pred EEEEec---cChH--HHHHHHHHHhCC--CeEEEecCCChh
Confidence 455544 4443 357899999999 999999655543
No 377
>cd01968 Nitrogenase_NifE_I Nitrogenase_NifE_I: a subgroup of the NifE subunit of the NifEN complex: NifE forms an alpha2beta2 tetramer with NifN. NifE and NifN are structurally homologous to nitrogenase MoFe protein alpha and beta subunits respectively. NifEN participates in the synthesis of the iron-molybdenum cofactor (FeMoco) of the MoFe protein. NifB-co (an iron and sulfur containing precursor of the FeMoco) from NifB is transferred to the NifEN complex where it is further processed to FeMoco. The NifEN bound precursor of FeMoco has been identified as a molybdenum-free, iron- and sulfur- containing analog of FeMoco. It has been suggested that this NifEN bound precursor also acts as a cofactor precursor in nitrogenase systems which require a cofactor other than FeMoco: i.e. iron-vanadium cofactor (FeVco) or iron only cofactor (FeFeco).
Probab=22.86 E-value=94 Score=30.97 Aligned_cols=32 Identities=13% Similarity=0.125 Sum_probs=25.5
Q ss_pred HHHHHHHhhhcCCCccEEEe-cCcHHHhhhCCCCeEE
Q 044031 95 NVFQALENISLTSKILSFII-TSTTSFSYHPNIPTYT 130 (468)
Q Consensus 95 ~l~~ll~~~~~~~~pD~vI~-~~~~~vA~~lgIP~i~ 130 (468)
.+.+.++.. +||++|. .....+|+++|||.+.
T Consensus 347 e~~~~i~~~----~pDl~ig~s~~~~~a~~~gip~~~ 379 (410)
T cd01968 347 ELKKLLKEK----KADLLVAGGKERYLALKLGIPFCD 379 (410)
T ss_pred HHHHHHhhc----CCCEEEECCcchhhHHhcCCCEEE
Confidence 344555555 8999999 8888999999999874
No 378
>TIGR03457 sulphoacet_xsc sulfoacetaldehyde acetyltransferase. Members of this protein family are sulfoacetaldehyde acetyltransferase, an enzyme of taurine utilization. Taurine, or 2-aminoethanesulfonate, can be used by bacteria as a source of carbon, nitrogen, and sulfur.
Probab=22.73 E-value=1.4e+02 Score=31.31 Aligned_cols=27 Identities=11% Similarity=0.119 Sum_probs=22.5
Q ss_pred cceEEecCCcc------hHHHHHHhCCcEEecc
Q 044031 347 VGGFVTHCGWS------SVVEAVTYGVPMIAWP 373 (468)
Q Consensus 347 ~~~~ithgG~~------s~~eal~~GvP~v~~P 373 (468)
.+++++|.|-| .+++|...++|+|++.
T Consensus 65 ~gv~~~t~GPG~~N~~~gla~A~~~~~Pvl~I~ 97 (579)
T TIGR03457 65 MSMVIGQNGPGVTNCVTAIAAAYWAHTPVVIVT 97 (579)
T ss_pred CEEEEECCCchHHHHHHHHHHHhhcCCCEEEEe
Confidence 44488998877 6779999999999995
No 379
>cd06187 O2ase_reductase_like The oxygenase reductase FAD/NADH binding domain acts as part of the multi-component bacterial oxygenases which oxidize hydrocarbons using oxygen as the oxidant. Electron transfer is from NADH via FAD (in the oxygenase reductase) and an [2FE-2S] ferredoxin center (fused to the FAD/NADH domain and/or discrete) to the oxygenase. Dioxygenases add both atoms of oxygen to the substrate, while mono-oxygenases (aka mixed oxygenases) add one atom to the substrate and one atom to water. In dioxygenases, Class I enzymes are 2 component, containing a reductase with Rieske type [2Fe-2S] redox centers and an oxygenase. Class II are 3 component, having discrete flavin and ferredoxin proteins and an oxygenase. Class III have 2 [2Fe-2S] centers, one fused to the flavin domain and the other separate.
Probab=22.67 E-value=2.3e+02 Score=25.13 Aligned_cols=41 Identities=5% Similarity=0.102 Sum_probs=29.6
Q ss_pred ceEEEecCCCccCHHHHHHHHHHHHhCCCCcEEEEEeCCCCCC
Q 044031 3 KTIALYPGPAFHHMISMVELGKLILQHRSDVSITILVPSMPLE 45 (468)
Q Consensus 3 ~~Iv~~~~~~~GHv~P~l~LA~~L~~~G~~h~Vt~~~~~~~~~ 45 (468)
.+++++..++ -+.|++.+++.|.+.+++.+|+++......+
T Consensus 99 ~~~lliagG~--GI~p~~sll~~~~~~~~~~~v~l~~~~~~~~ 139 (224)
T cd06187 99 RPVLCIAGGT--GLAPLRAIVEDALRRGEPRPVHLFFGARTER 139 (224)
T ss_pred CCEEEEecCc--CHHHHHHHHHHHHhcCCCCCEEEEEecCChh
Confidence 3677777544 5899999999999876556777776554433
No 380
>TIGR00715 precor6x_red precorrin-6x reductase. This enzyme was found to be a monomer by gel filtration.
Probab=22.60 E-value=83 Score=29.06 Aligned_cols=31 Identities=10% Similarity=0.038 Sum_probs=22.9
Q ss_pred HHHHHhhhcCCCccEEEe--cC-------cHHHhhhCCCCeEEE
Q 044031 97 FQALENISLTSKILSFII--TS-------TTSFSYHPNIPTYTY 131 (468)
Q Consensus 97 ~~ll~~~~~~~~pD~vI~--~~-------~~~vA~~lgIP~i~~ 131 (468)
..+++++ +.|++|+ +. -..+|.++|||+++.
T Consensus 190 ~al~~~~----~i~~lVtK~SG~~Gg~~eKi~AA~~lgi~vivI 229 (256)
T TIGR00715 190 KALLREY----RIDAVVTKASGEQGGELEKVKAAEALGINVIRI 229 (256)
T ss_pred HHHHHHc----CCCEEEEcCCCCccchHHHHHHHHHcCCcEEEE
Confidence 4566666 9999999 21 223888899999975
No 381
>cd03412 CbiK_N Anaerobic cobalamin biosynthetic cobalt chelatase (CbiK), N-terminal domain. CbiK is part of the cobalt-early path for cobalamin biosynthesis. It catalyzes the insertion of cobalt into the oxidized form of precorrin-2, factor II (sirohydrochlorin), the second step of the anaerobic branch of vitamin B12 biosynthesis. CbiK belongs to the class II family of chelatases and is a homomeric enzyme that does not require ATP for its enzymatic activity.
Probab=22.50 E-value=1.4e+02 Score=24.05 Aligned_cols=37 Identities=11% Similarity=0.329 Sum_probs=26.9
Q ss_pred eEEeccCCCcCCCHHHHHHHHHHHHh--CCCcEEEEEeC
Q 044031 272 VVFLCFGSRGTFSAPQLKEIAIGLER--SNQRFLWVVRN 308 (468)
Q Consensus 272 ~v~vs~GS~~~~~~~~~~~~~~al~~--~~~~~l~~~~~ 308 (468)
+++++|||......+.+..+.+.++. .+..+-|.+.+
T Consensus 3 illv~fGS~~~~~~~~~~~i~~~l~~~~p~~~V~~afts 41 (127)
T cd03412 3 ILLVSFGTSYPTAEKTIDAIEDKVRAAFPDYEVRWAFTS 41 (127)
T ss_pred EEEEeCCCCCHHHHHHHHHHHHHHHHHCCCCeEEEEecH
Confidence 89999999986445567778888864 34567776553
No 382
>PRK01185 ppnK inorganic polyphosphate/ATP-NAD kinase; Provisional
Probab=22.43 E-value=1.7e+02 Score=27.34 Aligned_cols=53 Identities=11% Similarity=0.226 Sum_probs=36.0
Q ss_pred cceEEecCCcchHHHHHH-hCCcEEecccccchhhHHHHHHhhcceeeeeccCCcccccCCCCccccHHHHHHHHHHHhc
Q 044031 347 VGGFVTHCGWSSVVEAVT-YGVPMIAWPLYAEQFLNSVALVQEMKVAMPMFLNGEEETIGNGEGVVSAERVEERVRELMM 425 (468)
Q Consensus 347 ~~~~ithgG~~s~~eal~-~GvP~v~~P~~~DQ~~na~~~~~~~g~g~~~~~~~~~~~~~~~~~~~~~~~l~~av~~~l~ 425 (468)
++++|+=||-||++.+.. +.+|++++-.. .+|...+ ++.+++.++++++++
T Consensus 53 ~D~vi~lGGDGT~L~a~~~~~~PilGIN~G--------------~lGFL~~--------------~~~~~~~~~l~~i~~ 104 (271)
T PRK01185 53 ADVIITIGGDGTILRTLQRAKGPILGINMG--------------GLGFLTE--------------IEIDEVGSAIKKLIR 104 (271)
T ss_pred CCEEEEEcCcHHHHHHHHHcCCCEEEEECC--------------CCccCcc--------------cCHHHHHHHHHHHHc
Confidence 345999999999999988 35677666431 2233322 566777788888876
Q ss_pred Cc
Q 044031 426 GS 427 (468)
Q Consensus 426 ~~ 427 (468)
+.
T Consensus 105 g~ 106 (271)
T PRK01185 105 GE 106 (271)
T ss_pred CC
Confidence 54
No 383
>TIGR02990 ectoine_eutA ectoine utilization protein EutA. Members of this protein family are EutA, a predicted arylmalonate decarboxylase found in a conserved ectoine utilization operon of species that include Sinorhizobium meliloti 1021 (where it is known to be induced by ectoine), Mesorhizobium loti and Silicibacter pomeroyi. It is missing from two other species with the other ectoine transport and utilization genes: Pseudomonas putida and Agrobacterium tumefaciens.
Probab=22.35 E-value=2.7e+02 Score=25.44 Aligned_cols=102 Identities=8% Similarity=0.064 Sum_probs=50.9
Q ss_pred HHHHHHHHHHHHhCCCCcEEEEEeCCCCCCchhhhhhhhccccCCCCCeeEEEcCCCCCCCCCCChhHHHHHHHHHhhHH
Q 044031 16 MISMVELGKLILQHRSDVSITILVPSMPLEESKTCSYINSISHRLNPIISFYYLPAIQMPSETLSRADIAIESIKLNSSN 95 (468)
Q Consensus 16 v~P~l~LA~~L~~~G~~h~Vt~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~i~~~~lp~~~~~~~~~~~~~~~~~~~~ 95 (468)
+.|..++.+.|++-| -.+|.++++=...-...+.++. ...||+...+..-...++.+ ........
T Consensus 105 tt~~~A~~~AL~alg-~~RIalvTPY~~~v~~~~~~~l------~~~G~eV~~~~~~~~~~~~~--------ia~i~p~~ 169 (239)
T TIGR02990 105 VTPSSAAVDGLAALG-VRRISLLTPYTPETSRPMAQYF------AVRGFEIVNFTCLGLTDDRE--------MARISPDC 169 (239)
T ss_pred eCHHHHHHHHHHHcC-CCEEEEECCCcHHHHHHHHHHH------HhCCcEEeeeeccCCCCCce--------eeecCHHH
Confidence 467778888888876 2567777442211111222333 33477766553221322211 11122233
Q ss_pred HHHHHHhhhcCCCccEEEe----cCcHH----HhhhCCCCeEEEec
Q 044031 96 VFQALENISLTSKILSFII----TSTTS----FSYHPNIPTYTYFN 133 (468)
Q Consensus 96 l~~ll~~~~~~~~pD~vI~----~~~~~----vA~~lgIP~i~~~~ 133 (468)
+.+++++.. ...+|.|+. ..+.. +-+++|+|++....
T Consensus 170 i~~~~~~~~-~~~aDAifisCTnLrt~~vi~~lE~~lGkPVlsSNq 214 (239)
T TIGR02990 170 IVEAALAAF-DPDADALFLSCTALRAATCAQRIEQAIGKPVVTSNQ 214 (239)
T ss_pred HHHHHHHhc-CCCCCEEEEeCCCchhHHHHHHHHHHHCCCEEEHHH
Confidence 344444442 237888887 22222 44568999976443
No 384
>PRK08527 acetolactate synthase 3 catalytic subunit; Validated
Probab=22.33 E-value=1.5e+02 Score=31.00 Aligned_cols=27 Identities=19% Similarity=0.295 Sum_probs=22.8
Q ss_pred cceEEecCCcc------hHHHHHHhCCcEEecc
Q 044031 347 VGGFVTHCGWS------SVVEAVTYGVPMIAWP 373 (468)
Q Consensus 347 ~~~~ithgG~~------s~~eal~~GvP~v~~P 373 (468)
.+++++|.|-| ++++|...++|+|++-
T Consensus 67 ~gv~~~t~GpG~~n~~~gla~A~~~~~Pvl~i~ 99 (563)
T PRK08527 67 VGVAIVTSGPGFTNAVTGLATAYMDSIPLVLIS 99 (563)
T ss_pred CEEEEECCCCcHHHHHHHHHHHhhcCCCEEEEe
Confidence 44489998876 7889999999999994
No 385
>PRK15438 erythronate-4-phosphate dehydrogenase PdxB; Provisional
Probab=22.24 E-value=4.8e+02 Score=25.75 Aligned_cols=60 Identities=17% Similarity=0.282 Sum_probs=38.2
Q ss_pred ceEEeccCCCcCCCHHHHHHHHHHHHhCCCcEEEEEeCCCCccccCCChhHHhhccCCCeEecCCCCHHhhhCccCcceE
Q 044031 271 SVVFLCFGSRGTFSAPQLKEIAIGLERSNQRFLWVVRNPSNAAEAELPEGFLERTKERGLVVKSWAPQSTILGHESVGGF 350 (468)
Q Consensus 271 ~~v~vs~GS~~~~~~~~~~~~~~al~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~pq~~il~~~~~~~~ 350 (468)
.+-.|++|.++ ..+++.++..|.+++.. ... ..+ .+. ...+.+-.++++.+++ +
T Consensus 118 tvGIIG~G~IG-------~~vA~~l~a~G~~V~~~-dp~-------~~~--------~~~-~~~~~~L~ell~~sDi--I 171 (378)
T PRK15438 118 TVGIVGVGNVG-------RRLQARLEALGIKTLLC-DPP-------RAD--------RGD-EGDFRSLDELVQEADI--L 171 (378)
T ss_pred EEEEECcCHHH-------HHHHHHHHHCCCEEEEE-CCc-------ccc--------ccc-ccccCCHHHHHhhCCE--E
Confidence 38889999997 66777777889987642 211 000 000 1146677888888887 7
Q ss_pred EecCCc
Q 044031 351 VTHCGW 356 (468)
Q Consensus 351 ithgG~ 356 (468)
+-|+-.
T Consensus 172 ~lh~PL 177 (378)
T PRK15438 172 TFHTPL 177 (378)
T ss_pred EEeCCC
Confidence 766653
No 386
>PRK13768 GTPase; Provisional
Probab=22.18 E-value=1.6e+02 Score=27.00 Aligned_cols=40 Identities=8% Similarity=0.007 Sum_probs=34.3
Q ss_pred CcceEEEecCCCccCHHHHHHHHHHHHhCCCCcEEEEEeCCC
Q 044031 1 MKKTIALYPGPAFHHMISMVELGKLILQHRSDVSITILVPSM 42 (468)
Q Consensus 1 m~~~Iv~~~~~~~GHv~P~l~LA~~L~~~G~~h~Vt~~~~~~ 42 (468)
|+.-+++...++.|-..-...++..|+++| ++|.++..++
T Consensus 1 ~~~~i~v~G~~G~GKTt~~~~~~~~l~~~g--~~v~~i~~D~ 40 (253)
T PRK13768 1 MMYIVFFLGTAGSGKTTLTKALSDWLEEQG--YDVAIVNLDP 40 (253)
T ss_pred CcEEEEEECCCCccHHHHHHHHHHHHHhcC--CceEEEECCC
Confidence 666677777789999999999999999999 9999996554
No 387
>cd06211 phenol_2-monooxygenase_like Phenol 2-monooxygenase (phenol hydroxylase) is a flavoprotein monooxygenase, able to use molecular oxygen as a substrate in the microbial degredation of phenol. This protein is encoded by a single gene and uses a tightly bound FAD cofactor in the NAD(P)H dependent conversion of phenol and O2 to catechol and H2O. This group is related to the NAD binding ferredoxin reductases.
Probab=22.14 E-value=2.2e+02 Score=25.66 Aligned_cols=62 Identities=13% Similarity=0.104 Sum_probs=38.4
Q ss_pred eEEEecCCCccCHHHHHHHHHHHHhCCCCcEEEEEeCCCCCCchhhhhhhhccccCCCCCeeEEE
Q 044031 4 TIALYPGPAFHHMISMVELGKLILQHRSDVSITILVPSMPLEESKTCSYINSISHRLNPIISFYY 68 (468)
Q Consensus 4 ~Iv~~~~~~~GHv~P~l~LA~~L~~~G~~h~Vt~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~ 68 (468)
+++++..++ =+.|++.+.+.+.+++++..|+++..........+.+..+.+.. ..+++.+..
T Consensus 111 ~~v~iagG~--GiaP~~~~l~~~~~~~~~~~v~l~~~~r~~~~~~~~~~l~~l~~-~~~~~~~~~ 172 (238)
T cd06211 111 PIIFIAGGS--GLSSPRSMILDLLERGDTRKITLFFGARTRAELYYLDEFEALEK-DHPNFKYVP 172 (238)
T ss_pred CEEEEeCCc--CHHHHHHHHHHHHhcCCCCcEEEEEecCChhhhccHHHHHHHHH-hCCCeEEEE
Confidence 577777444 38999999999999874446888765544433333344444332 334666654
No 388
>PRK08057 cobalt-precorrin-6x reductase; Reviewed
Probab=22.13 E-value=1.2e+02 Score=27.85 Aligned_cols=31 Identities=13% Similarity=0.077 Sum_probs=22.8
Q ss_pred HHHHHhhhcCCCccEEEe--cCc------HHHhhhCCCCeEEE
Q 044031 97 FQALENISLTSKILSFII--TST------TSFSYHPNIPTYTY 131 (468)
Q Consensus 97 ~~ll~~~~~~~~pD~vI~--~~~------~~vA~~lgIP~i~~ 131 (468)
..+++++ +.|++|+ +.+ ..+|+++|||+++.
T Consensus 183 ~aL~~~~----~i~~lVtK~SG~~g~~eKi~AA~~lgi~vivI 221 (248)
T PRK08057 183 RALLRQH----RIDVVVTKNSGGAGTEAKLEAARELGIPVVMI 221 (248)
T ss_pred HHHHHHc----CCCEEEEcCCCchhhHHHHHHHHHcCCeEEEE
Confidence 4556666 9999999 222 24788899999975
No 389
>cd02065 B12-binding_like B12 binding domain (B12-BD). Most of the members bind different cobalamid derivates, like B12 (adenosylcobamide) or methylcobalamin or methyl-Co(III) 5-hydroxybenzimidazolylcobamide. This domain is found in several enzymes, such as glutamate mutase, methionine synthase and methylmalonyl-CoA mutase. Cobalamin undergoes a conformational change on binding the protein; the dimethylbenzimidazole group, which is coordinated to the cobalt in the free cofactor, moves away from the corrin and is replaced by a histidine contributed by the protein. The sequence Asp-X-His-X-X-Gly, which contains this histidine ligand, is conserved in many cobalamin-binding proteins. Not all members of this family contain the conserved binding motif.
Probab=22.11 E-value=1.7e+02 Score=22.92 Aligned_cols=35 Identities=9% Similarity=-0.143 Sum_probs=30.8
Q ss_pred EEEecCCCccCHHHHHHHHHHHHhCCCCcEEEEEeCC
Q 044031 5 IALYPGPAFHHMISMVELGKLILQHRSDVSITILVPS 41 (468)
Q Consensus 5 Iv~~~~~~~GHv~P~l~LA~~L~~~G~~h~Vt~~~~~ 41 (468)
++....++..|..-...++..|.++| ++|.+....
T Consensus 2 ~l~~~~~~~~h~lg~~~~~~~l~~~G--~~v~~l~~~ 36 (125)
T cd02065 2 VLGATVGGDVHDIGKNIVAIALRDNG--FEVIDLGVD 36 (125)
T ss_pred EEEEEcCCchhhHHHHHHHHHHHHCC--CEEEEcCCC
Confidence 56777789999999999999999999 999998543
No 390
>PRK13512 coenzyme A disulfide reductase; Provisional
Probab=22.03 E-value=86 Score=31.54 Aligned_cols=35 Identities=14% Similarity=0.024 Sum_probs=26.7
Q ss_pred cceEEEecCCCccCHHHHHHHHHHHHhCCCCcEEEEEeCC
Q 044031 2 KKTIALYPGPAFHHMISMVELGKLILQHRSDVSITILVPS 41 (468)
Q Consensus 2 ~~~Iv~~~~~~~GHv~P~l~LA~~L~~~G~~h~Vt~~~~~ 41 (468)
|+|||++-.+..|+ ..|+.|++++++++||++...
T Consensus 1 m~~VVIIGgG~aG~-----~aA~~l~~~~~~~~I~li~~~ 35 (438)
T PRK13512 1 MPKIIVVGAVAGGA-----TCASQIRRLDKESDIIIFEKD 35 (438)
T ss_pred CCeEEEECCcHHHH-----HHHHHHHhhCCCCCEEEEECC
Confidence 24799998887775 667777777667999999554
No 391
>cd01973 Nitrogenase_VFe_beta_like Nitrogenase_VFe_beta -like: Nitrogenase VFe protein, beta subunit like. This group contains proteins similar to the beta subunits of the VFe protein of the vanadium-dependent (V-) nitrogenase. Nitrogenase catalyzes the ATP-dependent reduction of dinitrogen (N2) to ammonia. In addition to V-nitrogenase there is a molybdenum (Mo)-dependent nitrogenase and an iron only (Fe-) nitrogenase. The Mo-nitrogenase is the most widespread and best characterized of these systems. These systems consist of component 1 (VFe protein, FeFe protein or, MoFe protein respectively) and, component 2 (Fe protein). MoFe is an alpha2beta2 tetramer, V-and Fe- nitrogenases are alpha2beta2delta2 hexamers. The alpha and beta subunits of VFe and FeFe are similar to the alpha and beta subunits of MoFe. For MoFe each alphabeta pair contains one P-cluster (at the alphabeta interface) and, one molecule of iron molybdenum cofactor (FeMoco) contained within the alpha subunit. The Fe p
Probab=21.96 E-value=1.3e+02 Score=30.43 Aligned_cols=24 Identities=13% Similarity=0.126 Sum_probs=21.9
Q ss_pred CccEEEe-cCcHHHhhhCCCCeEEE
Q 044031 108 KILSFII-TSTTSFSYHPNIPTYTY 131 (468)
Q Consensus 108 ~pD~vI~-~~~~~vA~~lgIP~i~~ 131 (468)
+||++|. .+...+|+++|||.+..
T Consensus 381 ~~dliig~s~~~~~A~~~gip~~~~ 405 (454)
T cd01973 381 ELDLILGHSKGRYIAIDNNIPMVRV 405 (454)
T ss_pred CCCEEEECCccHHHHHHcCCCEEEe
Confidence 6999999 88999999999998764
No 392
>TIGR01743 purR_Bsub pur operon repressor, Bacillus subtilis type. This model represents the puring operon repressor PurR of low-GC Gram-positive bacteria. This homodimeric repressor contains a large region homologous to phosphoribosyltransferases and is inhibited by 5-phosphoribosyl 1-pyrophosphate.
Probab=21.94 E-value=1.1e+02 Score=28.40 Aligned_cols=27 Identities=11% Similarity=0.063 Sum_probs=22.4
Q ss_pred CCccEEEe------cCcHHHhhhCCCCeEEEec
Q 044031 107 SKILSFII------TSTTSFSYHPNIPTYTYFN 133 (468)
Q Consensus 107 ~~pD~vI~------~~~~~vA~~lgIP~i~~~~ 133 (468)
.++|+|++ +.+..+|..||+|.+...-
T Consensus 127 ~~iD~VvgvetkGIpLA~avA~~L~vp~vivRK 159 (268)
T TIGR01743 127 REIDAVMTVATKGIPLAYAVASVLNVPLVIVRK 159 (268)
T ss_pred CCCCEEEEEccchHHHHHHHHHHHCCCEEEEEE
Confidence 48999999 6688899999999887644
No 393
>TIGR01283 nifE nitrogenase molybdenum-iron cofactor biosynthesis protein NifE. This protein is part of the NifEN complex involved in biosynthesis of the molybdenum-iron cofactor used by the homologous NifDK complex of nitrogenase. In a few species, the protein is found as a NifEN fusion protein.
Probab=21.92 E-value=7.3e+02 Score=25.09 Aligned_cols=26 Identities=19% Similarity=0.583 Sum_probs=16.1
Q ss_pred EEecCC--cchHHHHH--HhCCcEEecccc
Q 044031 350 FVTHCG--WSSVVEAV--TYGVPMIAWPLY 375 (468)
Q Consensus 350 ~ithgG--~~s~~eal--~~GvP~v~~P~~ 375 (468)
-|..|+ ..-+++.| .+|+|.+..+.+
T Consensus 248 niv~~~~~~~~~a~~L~e~~GiP~~~~~~~ 277 (456)
T TIGR01283 248 NMVQCSKSMINLARKMEEKYGIPYFEGSFY 277 (456)
T ss_pred EEEECHhHHHHHHHHHHHHcCCCEEecCCC
Confidence 444443 34566777 689998876544
No 394
>PRK06932 glycerate dehydrogenase; Provisional
Probab=21.88 E-value=3.9e+02 Score=25.51 Aligned_cols=99 Identities=13% Similarity=0.232 Sum_probs=57.9
Q ss_pred ceEEeccCCCcCCCHHHHHHHHHHHHhCCCcEEEEEeCCCCccccCCChhHHhhccCCCeEecCCCCHHhhhCccCcceE
Q 044031 271 SVVFLCFGSRGTFSAPQLKEIAIGLERSNQRFLWVVRNPSNAAEAELPEGFLERTKERGLVVKSWAPQSTILGHESVGGF 350 (468)
Q Consensus 271 ~~v~vs~GS~~~~~~~~~~~~~~al~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~pq~~il~~~~~~~~ 350 (468)
.+-.|++|+.+ +++++.++..|.+++.. ... -... . ...+.+-.++|+.+++ +
T Consensus 149 tvgIiG~G~IG-------~~va~~l~~fg~~V~~~-~~~-------~~~~---------~-~~~~~~l~ell~~sDi--v 201 (314)
T PRK06932 149 TLGVFGKGCLG-------TEVGRLAQALGMKVLYA-EHK-------GASV---------C-REGYTPFEEVLKQADI--V 201 (314)
T ss_pred EEEEECCCHHH-------HHHHHHHhcCCCEEEEE-CCC-------cccc---------c-ccccCCHHHHHHhCCE--E
Confidence 38899999987 66777778889987642 211 0000 0 1135677889999988 7
Q ss_pred EecCCcchHHHHHHhCCcEEecccccchhhHHHHHHhhccee-eeeccCCcccccCCCCccccHHHHHHHHH
Q 044031 351 VTHCGWSSVVEAVTYGVPMIAWPLYAEQFLNSVALVQEMKVA-MPMFLNGEEETIGNGEGVVSAERVEERVR 421 (468)
Q Consensus 351 ithgG~~s~~eal~~GvP~v~~P~~~DQ~~na~~~~~~~g~g-~~~~~~~~~~~~~~~~~~~~~~~l~~av~ 421 (468)
+-|+-.+.- .....|+..+. .++=| +.++. .+++++..+.|.++++
T Consensus 202 ~l~~Plt~~----------------T~~li~~~~l~-~mk~ga~lIN~--------aRG~~Vde~AL~~aL~ 248 (314)
T PRK06932 202 TLHCPLTET----------------TQNLINAETLA-LMKPTAFLINT--------GRGPLVDEQALLDALE 248 (314)
T ss_pred EEcCCCChH----------------HhcccCHHHHH-hCCCCeEEEEC--------CCccccCHHHHHHHHH
Confidence 777754321 12345666663 44544 33343 3345566666666655
No 395
>PRK11914 diacylglycerol kinase; Reviewed
Probab=21.85 E-value=2.6e+02 Score=26.43 Aligned_cols=26 Identities=19% Similarity=0.256 Sum_probs=22.2
Q ss_pred eEEecCCcchHHHHH----HhCCcEEeccc
Q 044031 349 GFVTHCGWSSVVEAV----TYGVPMIAWPL 374 (468)
Q Consensus 349 ~~ithgG~~s~~eal----~~GvP~v~~P~ 374 (468)
.+|--||=||+.|++ ..++|+-++|.
T Consensus 67 ~vvv~GGDGTi~evv~~l~~~~~~lgiiP~ 96 (306)
T PRK11914 67 ALVVVGGDGVISNALQVLAGTDIPLGIIPA 96 (306)
T ss_pred EEEEECCchHHHHHhHHhccCCCcEEEEeC
Confidence 489999999999987 34799999997
No 396
>COG2861 Uncharacterized protein conserved in bacteria [Function unknown]
Probab=21.84 E-value=4.4e+02 Score=24.08 Aligned_cols=44 Identities=7% Similarity=0.091 Sum_probs=29.9
Q ss_pred HHHHHHHhhHHHHHHHHhhhcCCCccEEEe-------cCcHHHhhhCCCCeEEE
Q 044031 85 AIESIKLNSSNVFQALENISLTSKILSFII-------TSTTSFSYHPNIPTYTY 131 (468)
Q Consensus 85 ~~~~~~~~~~~l~~ll~~~~~~~~pD~vI~-------~~~~~vA~~lgIP~i~~ 131 (468)
+...+......++.+++++. +-++.+. +-+..+|.+.|||++.-
T Consensus 129 mGs~~tsn~~aM~~~m~~Lk---~r~l~flDs~T~a~S~a~~iAk~~gVp~~~r 179 (250)
T COG2861 129 MGSRFTSNEDAMEKLMEALK---ERGLYFLDSGTIANSLAGKIAKEIGVPVIKR 179 (250)
T ss_pred hhhhhcCcHHHHHHHHHHHH---HCCeEEEcccccccchhhhhHhhcCCceeee
Confidence 44445555667788888875 4455555 55667899999998863
No 397
>CHL00072 chlL photochlorophyllide reductase subunit L
Probab=21.83 E-value=1.9e+02 Score=27.22 Aligned_cols=39 Identities=10% Similarity=0.109 Sum_probs=34.2
Q ss_pred CcceEEEecCCCccCHHHHHHHHHHHHhCCCCcEEEEEeCCCC
Q 044031 1 MKKTIALYPGPAFHHMISMVELGKLILQHRSDVSITILVPSMP 43 (468)
Q Consensus 1 m~~~Iv~~~~~~~GHv~P~l~LA~~L~~~G~~h~Vt~~~~~~~ 43 (468)
|| |+++-=|+-|-..-.+.||..|+++| ++|.++-.++.
T Consensus 1 m~--ia~~gKGGVGKTTta~nLA~~La~~G--~rVLlID~DpQ 39 (290)
T CHL00072 1 MK--LAVYGKGGIGKSTTSCNISIALARRG--KKVLQIGCDPK 39 (290)
T ss_pred Ce--EEEECCCCCcHHHHHHHHHHHHHHCC--CeEEEEeccCC
Confidence 66 88888899999999999999999999 99999955443
No 398
>PF02585 PIG-L: GlcNAc-PI de-N-acetylase; InterPro: IPR003737 A number of the members of this family have been characterised as a probable N-acetylglucosaminyl-phosphatidylinositol de-N-acetylase, (3.5.1.89 from EC) that catalyses the second step in glycosylphosphatidylinositol (GPI) biosynthesis [, ]. The family also includes a number of thiol biosynthesis proteins. ; PDB: 2XAD_C 2X9L_A 3DFK_A 3DFM_A 3DFF_A 2IXD_A 1UAN_A 1Q74_B 1Q7T_B 3DFI_A.
Probab=21.80 E-value=4.1e+02 Score=21.02 Aligned_cols=21 Identities=0% Similarity=-0.081 Sum_probs=15.0
Q ss_pred HHhhHHHHHHHHhhhcCCCccEEEe
Q 044031 90 KLNSSNVFQALENISLTSKILSFII 114 (468)
Q Consensus 90 ~~~~~~l~~ll~~~~~~~~pD~vI~ 114 (468)
......+.++++++ +||.|++
T Consensus 86 ~~~~~~l~~~i~~~----~p~~V~t 106 (128)
T PF02585_consen 86 EELVRDLEDLIREF----RPDVVFT 106 (128)
T ss_dssp HHHHHHHHHHHHHH-----ESEEEE
T ss_pred HHHHHHHHHHHHHc----CCCEEEE
Confidence 33455677888888 9999998
No 399
>cd01967 Nitrogenase_MoFe_alpha_like Nitrogenase_MoFe_alpha_like: Nitrogenase MoFe protein, alpha subunit_like. The nitrogenase enzyme catalyzes the ATP-dependent reduction of dinitrogen to ammonia. Three genetically distinct types of nitrogenase systems are known to exist: a molybdenum-dependent nitrogenase (Mo-nitrogenase), a vanadium dependent nitrogenase (V-nitrogenase), and an iron-only nitrogenase (Fe-nitrogenase). These nitrogenase systems consist of component 1 (MoFe protein, VFe protein or, FeFe protein respectively) and, component 2 (Fe protein). This group contains the alpha subunit of component 1 of all three different forms. The most widespread and best characterized of these systems is the Mo-nitrogenase. MoFe is an alpha2beta2 tetramer, the alternative nitrogenases are alpha2beta2delta2 hexamers having alpha and beta subunits similar to the alpha and beta subunits of MoFe. The role of the delta subunit is unknown. For MoFe, each alphabeta pair of subunits contains one
Probab=21.77 E-value=1e+02 Score=30.60 Aligned_cols=33 Identities=12% Similarity=0.103 Sum_probs=26.2
Q ss_pred HHHHHHHhhhcCCCccEEEe-cCcHHHhhhCCCCeEEE
Q 044031 95 NVFQALENISLTSKILSFII-TSTTSFSYHPNIPTYTY 131 (468)
Q Consensus 95 ~l~~ll~~~~~~~~pD~vI~-~~~~~vA~~lgIP~i~~ 131 (468)
.+.+.+++. +||++|. .+...+|+++|+|++..
T Consensus 346 ~~~~~~~~~----~pdl~ig~~~~~~~a~~~gip~~~~ 379 (406)
T cd01967 346 ELEELVEKL----KPDLILSGIKEKYVAQKLGIPFLDL 379 (406)
T ss_pred HHHHHHHhc----CCCEEEeCCcchHHHHhcCCCEEec
Confidence 344555555 8999999 88888999999999754
No 400
>COG1422 Predicted membrane protein [Function unknown]
Probab=21.70 E-value=2.8e+02 Score=24.36 Aligned_cols=34 Identities=18% Similarity=0.113 Sum_probs=28.1
Q ss_pred HHHHHHHHHhcCch-hHHHHHHHHHHHHHHHHhhc
Q 044031 415 RVEERVRELMMGSE-GKALRERSLEMRMMAATAWN 448 (468)
Q Consensus 415 ~l~~av~~~l~~~~-~~~~~~~a~~l~~~~~~a~~ 448 (468)
-+..-+++++.|.+ -+++++.++++++++++|-+
T Consensus 59 l~~~i~~~~liD~ekm~~~qk~m~efq~e~~eA~~ 93 (201)
T COG1422 59 LYITILQKLLIDQEKMKELQKMMKEFQKEFREAQE 93 (201)
T ss_pred HHHHHHHHHhccHHHHHHHHHHHHHHHHHHHHHHH
Confidence 45556777787876 68999999999999999977
No 401
>TIGR02329 propionate_PrpR propionate catabolism operon regulatory protein PrpR. At least five distinct pathways exists for the catabolism of propionate by way of propionyl-CoA. Members of this family represent the transcriptional regulatory protein PrpR, whose gene is found in most cases divergently transcribed from an operon for the methylcitric acid cycle of propionate catabolism. 2-methylcitric acid, a catabolite by this pathway, is a coactivator of PrpR.
Probab=21.56 E-value=1.7e+02 Score=30.37 Aligned_cols=41 Identities=5% Similarity=0.088 Sum_probs=31.7
Q ss_pred hHHHHHHHHhhhcCCCccEEEe-cCcHHHhhhCCCCeEEEecc
Q 044031 93 SSNVFQALENISLTSKILSFII-TSTTSFSYHPNIPTYTYFNS 134 (468)
Q Consensus 93 ~~~l~~ll~~~~~~~~pD~vI~-~~~~~vA~~lgIP~i~~~~~ 134 (468)
.......++++.+ .+.++||. .-+..+|+++|++.+...+.
T Consensus 131 ~~e~~~~~~~l~~-~G~~~viG~~~~~~~A~~~gl~~ili~s~ 172 (526)
T TIGR02329 131 EEDARSCVNDLRA-RGIGAVVGAGLITDLAEQAGLHGVFLYSA 172 (526)
T ss_pred HHHHHHHHHHHHH-CCCCEEECChHHHHHHHHcCCceEEEecH
Confidence 3455566665544 48999999 77888999999999988775
No 402
>PRK02399 hypothetical protein; Provisional
Probab=21.54 E-value=7.3e+02 Score=24.70 Aligned_cols=120 Identities=11% Similarity=-0.020 Sum_probs=0.0
Q ss_pred CcceEEEecCCCccCHHHHHHHHHHHHhCCCCcEEEEEeCCCCCCchhhhhhhhccccCCCCCeeEEEcCCCCCCCCCCC
Q 044031 1 MKKTIALYPGPAFHHMISMVELGKLILQHRSDVSITILVPSMPLEESKTCSYINSISHRLNPIISFYYLPAIQMPSETLS 80 (468)
Q Consensus 1 m~~~Iv~~~~~~~GHv~P~l~LA~~L~~~G~~h~Vt~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~i~~~~lp~~~~~ 80 (468)
|+++|+++. -..---.=+.-|.+.|.++| ++|.++-.....+.. ..+.|+-..+-.. -+.+...
T Consensus 2 ~~~~I~iig-T~DTK~~E~~yl~~~i~~~g--~~v~~iDv~~~~~p~------------~~~dis~~~Va~~-~g~~~~~ 65 (406)
T PRK02399 2 MMKRIYIAG-TLDTKGEELAYVKDLIEAAG--LEVVTVDVSGLGEPP------------FEPDISAEEVAEA-AGDGIEA 65 (406)
T ss_pred CCCEEEEEe-ccCCcHHHHHHHHHHHHHCC--CceEEEecCCCCCCC------------CCCCCCHHHHHHH-cCCCHHH
Q ss_pred hhHH--HHHHHHHhhHHHHHHHHhhhcCCCccEEEe---cCcHHHhhh------CCCCeEEEecchh
Q 044031 81 RADI--AIESIKLNSSNVFQALENISLTSKILSFII---TSTTSFSYH------PNIPTYTYFNSCA 136 (468)
Q Consensus 81 ~~~~--~~~~~~~~~~~l~~ll~~~~~~~~pD~vI~---~~~~~vA~~------lgIP~i~~~~~~~ 136 (468)
.... -...+..+...+..+++++.++.+.|-||. ..+..++-. +|+|-+..++...
T Consensus 66 ~~~~~dRg~ai~~M~~ga~~~v~~L~~~g~i~gviglGGs~GT~lat~aMr~LPiG~PKlmVSTmAs 132 (406)
T PRK02399 66 VFCGGDRGSAMAAMAEGAAAFVRELYERGDVAGVIGLGGSGGTALATPAMRALPIGVPKLMVSTMAS 132 (406)
T ss_pred hhcCccHHHHHHHHHHHHHHHHHHHHhcCCccEEEEecCcchHHHHHHHHHhCCCCCCeEEEEcccc
No 403
>TIGR00730 conserved hypothetical protein, DprA/Smf-related, family 2. This model represents one branch of a subfamily of proteins of unknown function. Both PSI-BLAST and weak hits by this model show a low level of similarity to and suggest an evolutionary relationship of the subfamily to the DprA/Smf family of DNA-processing proteins involved in chromosomal transformation with foreign DNA. Both Aquifex aeolicus and Mycobacterium leprae have one member in each of two branches of this subfamily, suggesting that the branches may have distinct functions.
Probab=21.48 E-value=4.6e+02 Score=22.60 Aligned_cols=36 Identities=11% Similarity=0.202 Sum_probs=26.2
Q ss_pred HHhhhCccCcceEEecCCcchHHHHHH---------hCCcEEecc
Q 044031 338 QSTILGHESVGGFVTHCGWSSVVEAVT---------YGVPMIAWP 373 (468)
Q Consensus 338 q~~il~~~~~~~~ithgG~~s~~eal~---------~GvP~v~~P 373 (468)
...++...+..+++--||.||+-|.+. +.+|++.+=
T Consensus 89 Rk~~m~~~sda~I~lPGG~GTL~El~e~~~~~qlg~~~kPiil~n 133 (178)
T TIGR00730 89 RKAMMAELADAFIAMPGGFGTLEELFEVLTWAQLGIHQKPIILFN 133 (178)
T ss_pred HHHHHHHhCCEEEEcCCCcchHHHHHHHHHHHHcCCCCCCEEEEC
Confidence 445566555556777899999998743 489998874
No 404
>PRK02645 ppnK inorganic polyphosphate/ATP-NAD kinase; Provisional
Probab=21.44 E-value=2.9e+02 Score=26.30 Aligned_cols=27 Identities=15% Similarity=0.208 Sum_probs=23.0
Q ss_pred ceEEecCCcchHHHHHHh----CCcEEeccc
Q 044031 348 GGFVTHCGWSSVVEAVTY----GVPMIAWPL 374 (468)
Q Consensus 348 ~~~ithgG~~s~~eal~~----GvP~v~~P~ 374 (468)
+++|+-||=||+.+++.. ++|++++..
T Consensus 59 d~vi~~GGDGT~l~~~~~~~~~~~pv~gin~ 89 (305)
T PRK02645 59 DLAIVLGGDGTVLAAARHLAPHDIPILSVNV 89 (305)
T ss_pred CEEEEECCcHHHHHHHHHhccCCCCEEEEec
Confidence 349999999999999864 789998876
No 405
>PRK15062 hydrogenase isoenzymes formation protein HypD; Provisional
Probab=21.38 E-value=7.7e+02 Score=24.07 Aligned_cols=56 Identities=20% Similarity=0.089 Sum_probs=36.2
Q ss_pred hhHHHHHHHHhhhcCCCccEEEe----------cCcHHHhhhCCCCeEEEecchhHHHHHHHhhhhhh
Q 044031 92 NSSNVFQALENISLTSKILSFII----------TSTTSFSYHPNIPTYTYFNSCASTLAAILYLPTLH 149 (468)
Q Consensus 92 ~~~~l~~ll~~~~~~~~pD~vI~----------~~~~~vA~~lgIP~i~~~~~~~~~~~~~~~~p~~~ 149 (468)
..+.++.++++-. .+.|-+|+ -.-..+++++++|.++....+.-.+...+.+-...
T Consensus 171 ~PPa~~~ll~~~~--~~idgfi~PGHVstI~G~~~y~~l~~~y~~P~VVaGFEp~DiL~ai~~lv~q~ 236 (364)
T PRK15062 171 VPPAMRALLEDPE--LRIDGFIAPGHVSTIIGTEPYEFLAEEYGIPVVVAGFEPLDILQSILMLVRQL 236 (364)
T ss_pred cHHHHHHHHcCCC--CCccEEEecCEeEEEeccchhHHHHHHcCCCeEEeccCHHHHHHHHHHHHHHH
Confidence 4455555654432 36777777 22334899999999998888877766555554433
No 406
>cd01828 sialate_O-acetylesterase_like2 sialate_O-acetylesterase_like subfamily of the SGNH-hydrolases, a diverse family of lipases and esterases. The tertiary fold of the enzyme is substantially different from that of the alpha/beta hydrolase family and unique among all known hydrolases; its active site closely resembles the Ser-His-Asp(Glu) triad found in other serine hydrolases.
Probab=21.38 E-value=2.1e+02 Score=23.85 Aligned_cols=47 Identities=17% Similarity=0.157 Sum_probs=29.5
Q ss_pred hHHhhcCCCCCceEEeccCCCcC---CCHH----HHHHHHHHHHh--CCCcEEEEEeC
Q 044031 260 CLTWLDSQPSGSVVFLCFGSRGT---FSAP----QLKEIAIGLER--SNQRFLWVVRN 308 (468)
Q Consensus 260 l~~~l~~~~~~~~v~vs~GS~~~---~~~~----~~~~~~~al~~--~~~~~l~~~~~ 308 (468)
+.+++...++ +|++.+|+.-. .+.+ .+.++++.++. .+.+++|..-.
T Consensus 41 l~~~~~~~pd--~vvl~~G~ND~~~~~~~~~~~~~l~~li~~~~~~~~~~~vi~~~~~ 96 (169)
T cd01828 41 LDEDVALQPK--AIFIMIGINDLAQGTSDEDIVANYRTILEKLRKHFPNIKIVVQSIL 96 (169)
T ss_pred HHHHhccCCC--EEEEEeeccCCCCCCCHHHHHHHHHHHHHHHHHHCCCCeEEEEecC
Confidence 3445533343 99999999853 2333 34556777776 77888886543
No 407
>COG0223 Fmt Methionyl-tRNA formyltransferase [Translation, ribosomal structure and biogenesis]
Probab=21.35 E-value=1.3e+02 Score=28.69 Aligned_cols=36 Identities=17% Similarity=0.223 Sum_probs=25.0
Q ss_pred ceEEEecCCCccCHHHHHHHHHHHHhCCCCcEEEEEeCCCCCC
Q 044031 3 KTIALYPGPAFHHMISMVELGKLILQHRSDVSITILVPSMPLE 45 (468)
Q Consensus 3 ~~Iv~~~~~~~GHv~P~l~LA~~L~~~G~~h~Vt~~~~~~~~~ 45 (468)
++|+|+..|.. ....-+.|.+.| |+|.-+.+.+...
T Consensus 2 mkivF~GTp~f-----a~~~L~~L~~~~--~eivaV~Tqpdkp 37 (307)
T COG0223 2 MRIVFFGTPEF-----AVPSLEALIEAG--HEIVAVVTQPDKP 37 (307)
T ss_pred cEEEEEcCchh-----hHHHHHHHHhCC--CceEEEEeCCCCc
Confidence 56888877643 345556788898 9998887655443
No 408
>PRK09213 pur operon repressor; Provisional
Probab=21.34 E-value=1.2e+02 Score=28.23 Aligned_cols=27 Identities=15% Similarity=0.077 Sum_probs=22.3
Q ss_pred CCccEEEe------cCcHHHhhhCCCCeEEEec
Q 044031 107 SKILSFII------TSTTSFSYHPNIPTYTYFN 133 (468)
Q Consensus 107 ~~pD~vI~------~~~~~vA~~lgIP~i~~~~ 133 (468)
.++|+|++ +.+..+|..||+|.+...-
T Consensus 129 ~~iD~Vvtvet~GIplA~~vA~~L~vp~vivRK 161 (271)
T PRK09213 129 KKIDAVMTVETKGIPLAYAVANYLNVPFVIVRR 161 (271)
T ss_pred cCCCEEEEEccccHHHHHHHHHHHCCCEEEEEE
Confidence 47999999 6688899999999887643
No 409
>PRK14571 D-alanyl-alanine synthetase A; Provisional
Probab=21.31 E-value=4e+02 Score=25.02 Aligned_cols=34 Identities=18% Similarity=0.108 Sum_probs=22.4
Q ss_pred EEeccCCCc---CCCHHHHHHHHHHHHhCCCcEEEEE
Q 044031 273 VFLCFGSRG---TFSAPQLKEIAIGLERSNQRFLWVV 306 (468)
Q Consensus 273 v~vs~GS~~---~~~~~~~~~~~~al~~~~~~~l~~~ 306 (468)
|.|-||..+ ..+......++++|++.|.++...-
T Consensus 3 v~v~~gg~s~e~~~sl~s~~~i~~al~~~g~~~~~i~ 39 (299)
T PRK14571 3 VALLMGGVSREREISLRSGERVKKALEKLGYEVTVFD 39 (299)
T ss_pred EEEEeCCCCCCccchHHHHHHHHHHHHHcCCeEEEEc
Confidence 344455554 3345556779999999998876653
No 410
>COG0162 TyrS Tyrosyl-tRNA synthetase [Translation, ribosomal structure and biogenesis]
Probab=21.23 E-value=97 Score=30.71 Aligned_cols=28 Identities=11% Similarity=0.243 Sum_probs=23.5
Q ss_pred CccCHHHHHHHHHHHHhCCCCcEEEEEeCCC
Q 044031 12 AFHHMISMVELGKLILQHRSDVSITILVPSM 42 (468)
Q Consensus 12 ~~GHv~P~l~LA~~L~~~G~~h~Vt~~~~~~ 42 (468)
--||+.|+..|. +|+++| |+|+++..+.
T Consensus 47 HlGhlv~l~kL~-~fQ~aG--h~~ivLigd~ 74 (401)
T COG0162 47 HLGHLVPLMKLR-RFQDAG--HKPIVLIGDA 74 (401)
T ss_pred chhhHHHHHHHH-HHHHCC--CeEEEEeccc
Confidence 459999998886 899999 9999996654
No 411
>PF00175 NAD_binding_1: Oxidoreductase NAD-binding domain ; InterPro: IPR001433 Bacterial ferredoxin-NADP+ reductase may be bound to the thylakoid membrane or anchored to the thylakoid-bound phycobilisomes. Chloroplast ferredoxin-NADP+ reductase (1.18.1.2 from EC) may play a key role in regulating the relative amounts of cyclic and non-cyclic electron flow to meet the demands of the plant for ATP and reducing power. It is involved in the final step in the linear photosynthetic electron transport chain and has also been implicated in cyclic electron flow around photosystem I where its role would be to return electrons from ferredoxin to the cytochrome B-F complex. This domain is present in a variety of proteins that include, bacterial flavohemoprotein, mammalian NADH-cytochrome b5 reductase, eukaryotic NADPH-cytochrome P450 reductase, nitrate reductase from plants, nitric-oxide synthase, bacterial vanillate demethylase, as well as others.; GO: 0016491 oxidoreductase activity, 0055114 oxidation-reduction process; PDB: 1UMK_A 1CNE_A 2CND_A 1CNF_A 4FK8_A 4F7D_A 2XNJ_B 1FDR_A 1JB9_A 3LVB_A ....
Probab=21.19 E-value=1.2e+02 Score=23.05 Aligned_cols=53 Identities=9% Similarity=0.239 Sum_probs=33.6
Q ss_pred HHHHHHHHHHHHhCCCCcEEEEEeCCCCCCchhhhhhhhccccCCCC-CeeEEEc
Q 044031 16 MISMVELGKLILQHRSDVSITILVPSMPLEESKTCSYINSISHRLNP-IISFYYL 69 (468)
Q Consensus 16 v~P~l~LA~~L~~~G~~h~Vt~~~~~~~~~~~~~~~~~~~~~~~~~~-~i~~~~i 69 (468)
+.|++.+.+.+.+++...+|+++-.....+...+.+.+..+.. ..+ .+.+...
T Consensus 8 IaP~~s~l~~~~~~~~~~~v~l~~~~r~~~~~~~~~~l~~~~~-~~~~~~~~~~~ 61 (109)
T PF00175_consen 8 IAPFLSMLRYLLERNDNRKVTLFYGARTPEDLLFRDELEALAQ-EYPNRFHVVYV 61 (109)
T ss_dssp GHHHHHHHHHHHHHTCTSEEEEEEEESSGGGSTTHHHHHHHHH-HSTTCEEEEEE
T ss_pred HHHHHHHHHHHHHhCCCCCEEEEEEEcccccccchhHHHHHHh-hcccccccccc
Confidence 7899999999996544488998876655554444444444322 222 3566555
No 412
>TIGR02720 pyruv_oxi_spxB pyruvate oxidase. Members of this family are examples of pyruvate oxidase (EC 1.2.3.3), an enzyme with FAD and TPP as cofactors that catalyzes the reaction pyruvate + phosphate + O2 + H2O = acetyl phosphate + CO2 + H2O2. It should not be confused with pyruvate dehydrogenase [cytochrome] (EC 1.2.2.2) as in E. coli PoxB, although the E. coli enzyme is closely homologous and has pyruvate oxidase as an alternate name.
Probab=21.10 E-value=1.9e+02 Score=30.35 Aligned_cols=27 Identities=22% Similarity=0.278 Sum_probs=22.6
Q ss_pred cceEEecCCcc------hHHHHHHhCCcEEecc
Q 044031 347 VGGFVTHCGWS------SVVEAVTYGVPMIAWP 373 (468)
Q Consensus 347 ~~~~ithgG~~------s~~eal~~GvP~v~~P 373 (468)
.+++++|+|-| .+++|...++|+|++.
T Consensus 64 ~gv~~~t~GPG~~n~~~~i~~A~~~~~Pvl~I~ 96 (575)
T TIGR02720 64 IGVCFGSAGPGATHLLNGLYDAKEDHVPVLALV 96 (575)
T ss_pred ceEEEeCCCCcHHHHHHHHHHHhhcCCCEEEEe
Confidence 34488888866 7889999999999995
No 413
>COG2179 Predicted hydrolase of the HAD superfamily [General function prediction only]
Probab=21.09 E-value=1.3e+02 Score=25.68 Aligned_cols=80 Identities=16% Similarity=0.290 Sum_probs=44.1
Q ss_pred CcchhHHhhcCC-CCCceEEeccCCCcCCCHHHHHHHHHHHHhCCCcEEEEEeCCCCccccCCChhHHhhc-----cCCC
Q 044031 256 VSSDCLTWLDSQ-PSGSVVFLCFGSRGTFSAPQLKEIAIGLERSNQRFLWVVRNPSNAAEAELPEGFLERT-----KERG 329 (468)
Q Consensus 256 ~~~~l~~~l~~~-~~~~~v~vs~GS~~~~~~~~~~~~~~al~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~-----~~~~ 329 (468)
..+++.+|+++- ..+..|+|. ++.+. ..+..+.+..|.+|||-.+++ ++.+|...+ ..++
T Consensus 47 ~tpe~~~W~~e~k~~gi~v~vv----SNn~e---~RV~~~~~~l~v~fi~~A~KP-------~~~~fr~Al~~m~l~~~~ 112 (175)
T COG2179 47 ATPELRAWLAELKEAGIKVVVV----SNNKE---SRVARAAEKLGVPFIYRAKKP-------FGRAFRRALKEMNLPPEE 112 (175)
T ss_pred CCHHHHHHHHHHHhcCCEEEEE----eCCCH---HHHHhhhhhcCCceeecccCc-------cHHHHHHHHHHcCCChhH
Confidence 578899998763 333444442 12223 345556667899999988876 555554322 2334
Q ss_pred eEecCCCCHHhhhCccCcce
Q 044031 330 LVVKSWAPQSTILGHESVGG 349 (468)
Q Consensus 330 ~~v~~~~pq~~il~~~~~~~ 349 (468)
+++.+===..+||+.-..|+
T Consensus 113 vvmVGDqL~TDVlggnr~G~ 132 (175)
T COG2179 113 VVMVGDQLFTDVLGGNRAGM 132 (175)
T ss_pred EEEEcchhhhhhhcccccCc
Confidence 44333212445665444433
No 414
>PRK06114 short chain dehydrogenase; Provisional
Probab=20.96 E-value=1.5e+02 Score=26.82 Aligned_cols=34 Identities=9% Similarity=0.060 Sum_probs=27.1
Q ss_pred cceEEEecCCCccCHHHHHHHHHHHHhCCCCcEEEEEeC
Q 044031 2 KKTIALYPGPAFHHMISMVELGKLILQHRSDVSITILVP 40 (468)
Q Consensus 2 ~~~Iv~~~~~~~GHv~P~l~LA~~L~~~G~~h~Vt~~~~ 40 (468)
+.++++++.++.| -..++|+.|+++| ++|.++..
T Consensus 7 ~~k~~lVtG~s~g---IG~~ia~~l~~~G--~~v~~~~r 40 (254)
T PRK06114 7 DGQVAFVTGAGSG---IGQRIAIGLAQAG--ADVALFDL 40 (254)
T ss_pred CCCEEEEECCCch---HHHHHHHHHHHCC--CEEEEEeC
Confidence 3468888876665 6789999999999 99988743
No 415
>COG1090 Predicted nucleoside-diphosphate sugar epimerase [General function prediction only]
Probab=20.88 E-value=7.1e+02 Score=23.43 Aligned_cols=27 Identities=19% Similarity=0.109 Sum_probs=21.2
Q ss_pred HHHHHHHHHhCCCCcEEEEEeCCCCCCch
Q 044031 19 MVELGKLILQHRSDVSITILVPSMPLEES 47 (468)
Q Consensus 19 ~l~LA~~L~~~G~~h~Vt~~~~~~~~~~~ 47 (468)
.-+|..+|.+.| |+||+++-.+.....
T Consensus 11 G~~L~~~L~~~g--h~v~iltR~~~~~~~ 37 (297)
T COG1090 11 GRALTARLRKGG--HQVTILTRRPPKASQ 37 (297)
T ss_pred hHHHHHHHHhCC--CeEEEEEcCCcchhh
Confidence 357889999999 999999876665443
No 416
>cd01715 ETF_alpha The electron transfer flavoprotein (ETF) serves as a specific electron acceptor for various mitochondrial dehydrogenases. ETF transfers electrons to the main respiratory chain via ETF-ubiquinone oxidoreductase. ETF is an heterodimer that consists of an alpha and a beta subunit which binds one molecule of FAD per dimer . A similar system also exists in some bacteria. The homologous pair of proteins (FixA/FixB) are essential for nitrogen fixation. The alpha subunit of ETF is structurally related to the bacterial nitrogen fixation protein fixB which could play a role in a redox process and feed electrons to ferredoxin.
Probab=20.88 E-value=1.4e+02 Score=25.27 Aligned_cols=35 Identities=3% Similarity=-0.033 Sum_probs=25.8
Q ss_pred HHHHHHHhhhcCCCccEEEe-------cCcHHHhhhCCCCeEEEec
Q 044031 95 NVFQALENISLTSKILSFII-------TSTTSFSYHPNIPTYTYFN 133 (468)
Q Consensus 95 ~l~~ll~~~~~~~~pD~vI~-------~~~~~vA~~lgIP~i~~~~ 133 (468)
.+.+++++. +||+|+. ..+..+|.+||.|.+.-..
T Consensus 74 al~~~i~~~----~p~~Vl~~~t~~g~~la~rlAa~L~~~~vtdv~ 115 (168)
T cd01715 74 ALVALAKKE----KPSHILAGATSFGKDLAPRVAAKLDVGLISDVT 115 (168)
T ss_pred HHHHHHHhc----CCCEEEECCCccccchHHHHHHHhCCCceeeEE
Confidence 344555554 8999999 5577799999999886443
No 417
>PRK07609 CDP-6-deoxy-delta-3,4-glucoseen reductase; Validated
Probab=20.82 E-value=2e+02 Score=27.66 Aligned_cols=63 Identities=8% Similarity=0.055 Sum_probs=38.4
Q ss_pred eEEEecCCCccCHHHHHHHHHHHHhCCCCcEEEEEeCCCCCCchhhhhhhhccccCCCCCeeEEEc
Q 044031 4 TIALYPGPAFHHMISMVELGKLILQHRSDVSITILVPSMPLEESKTCSYINSISHRLNPIISFYYL 69 (468)
Q Consensus 4 ~Iv~~~~~~~GHv~P~l~LA~~L~~~G~~h~Vt~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~i 69 (468)
+++++..|+ -+.|++.+.+.+.+++++..|+++-.....+........+.+.. ..+++++...
T Consensus 206 ~ivlIagGt--GiaP~~s~l~~~~~~~~~~~i~l~~g~r~~~dl~~~e~l~~~~~-~~~~~~~~~~ 268 (339)
T PRK07609 206 PIVLLASGT--GFAPIKSIVEHLRAKGIQRPVTLYWGARRPEDLYLSALAEQWAE-ELPNFRYVPV 268 (339)
T ss_pred CEEEEecCc--ChhHHHHHHHHHHhcCCCCcEEEEEecCChHHhccHHHHHHHHH-hCCCeEEEEE
Confidence 577777665 58999999999999874456887755443332222233333322 3456776543
No 418
>TIGR01012 Sa_S2_E_A ribosomal protein Sa(cytosolic)/S2(archaeal). TIGR01011 describes the related protein of organelles and bacteria.
Probab=20.82 E-value=97 Score=27.28 Aligned_cols=26 Identities=8% Similarity=0.087 Sum_probs=21.1
Q ss_pred CccEEEe------cCcHHHhhhCCCCeEEEec
Q 044031 108 KILSFII------TSTTSFSYHPNIPTYTYFN 133 (468)
Q Consensus 108 ~pD~vI~------~~~~~vA~~lgIP~i~~~~ 133 (468)
.||++|. .-+..-|.++|||.+.+.-
T Consensus 108 ~Pdlliv~dp~~~~~Av~EA~~l~IP~Iai~D 139 (196)
T TIGR01012 108 EPEVVVVTDPRADHQALKEASEVGIPIVALCD 139 (196)
T ss_pred CCCEEEEECCccccHHHHHHHHcCCCEEEEee
Confidence 7999988 4466788899999998654
No 419
>TIGR01501 MthylAspMutase methylaspartate mutase, S subunit. This model represents the S (sigma) subunit of methylaspartate mutase (glutamate mutase), a cobalamin-dependent enzyme that catalyzes the first step in a pathway of glutamate fermentation.
Probab=20.81 E-value=1.7e+02 Score=23.99 Aligned_cols=42 Identities=24% Similarity=0.090 Sum_probs=36.1
Q ss_pred cceEEEecCCCccCHHHHHHHHHHHHhCCCCcEEEEEeCCCCCC
Q 044031 2 KKTIALYPGPAFHHMISMVELGKLILQHRSDVSITILVPSMPLE 45 (468)
Q Consensus 2 ~~~Iv~~~~~~~GHv~P~l~LA~~L~~~G~~h~Vt~~~~~~~~~ 45 (468)
+++|++.+..+-+|-.=---++..|..+| ++|.......+.+
T Consensus 1 ~~~vvigtv~~D~HdiGk~iv~~~l~~~G--feVi~LG~~v~~e 42 (134)
T TIGR01501 1 KKTIVLGVIGSDCHAVGNKILDHAFTNAG--FNVVNLGVLSPQE 42 (134)
T ss_pred CCeEEEEEecCChhhHhHHHHHHHHHHCC--CEEEECCCCCCHH
Confidence 36799999999999999999999999999 9999987655443
No 420
>TIGR02931 anfK_nitrog Fe-only nitrogenase, beta subunit. Nitrogenase is the enzyme of biological nitrogen fixation. The most wide-spread and most efficient nitrogenase contains a molybdenum cofactor. This protein family, AnfK, represents the beta subunit of the iron-only alternative nitrogenase. It is homologous to NifK and VnfK, of the molybdenum-containing and the vanadium (V)-containing types, respectively.
Probab=20.78 E-value=1.3e+02 Score=30.47 Aligned_cols=24 Identities=17% Similarity=0.098 Sum_probs=21.8
Q ss_pred CccEEEe-cCcHHHhhhCCCCeEEE
Q 044031 108 KILSFII-TSTTSFSYHPNIPTYTY 131 (468)
Q Consensus 108 ~pD~vI~-~~~~~vA~~lgIP~i~~ 131 (468)
+||++|. .+...+|+++|||.+..
T Consensus 388 ~~Dliig~s~~~~~a~k~gip~~~~ 412 (461)
T TIGR02931 388 ELDLILGHSKGRFISIDYNIPMVRV 412 (461)
T ss_pred CCCEEEECcchHHHHHHcCCCEEEe
Confidence 8999999 88899999999998864
No 421
>TIGR02932 vnfK_nitrog V-containing nitrogenase, beta subunit. Nitrogenase is the enzyme of biological nitrogen fixation. The most wide-spread and most efficient nitrogenase contains a molybdenum cofactor. This protein family, VnfK, represents the beta subunit of the vanadium (V)-containing alternative nitrogenase. It is homologous to NifK and AnfK, of the molybdenum-containing and the iron (Fe)-only types, respectively.
Probab=20.68 E-value=1.4e+02 Score=30.38 Aligned_cols=24 Identities=17% Similarity=0.133 Sum_probs=21.8
Q ss_pred CccEEEe-cCcHHHhhhCCCCeEEE
Q 044031 108 KILSFII-TSTTSFSYHPNIPTYTY 131 (468)
Q Consensus 108 ~pD~vI~-~~~~~vA~~lgIP~i~~ 131 (468)
+||++|. .+...+|+++|||.+..
T Consensus 384 ~~dllig~s~~~~~A~klgip~~~~ 408 (457)
T TIGR02932 384 DIDLIMGHSKGRYVAIDANIPMVRV 408 (457)
T ss_pred CCCEEEECCchHHHHHHcCCCEEEe
Confidence 8999999 88889999999998864
No 422
>PRK13185 chlL protochlorophyllide reductase iron-sulfur ATP-binding protein; Provisional
Probab=20.62 E-value=2.1e+02 Score=26.32 Aligned_cols=40 Identities=10% Similarity=0.044 Sum_probs=32.8
Q ss_pred CcceEEEecCCCccCHHHHHHHHHHHHhCCCCcEEEEEeCCC
Q 044031 1 MKKTIALYPGPAFHHMISMVELGKLILQHRSDVSITILVPSM 42 (468)
Q Consensus 1 m~~~Iv~~~~~~~GHv~P~l~LA~~L~~~G~~h~Vt~~~~~~ 42 (468)
|...|++.-=|+-|-..-...||..|+++| ++|.++-.++
T Consensus 1 m~~iIav~~KGGVGKTT~~~nLA~~la~~G--~kVLliD~Dp 40 (270)
T PRK13185 1 MALVLAVYGKGGIGKSTTSSNLSAAFAKLG--KKVLQIGCDP 40 (270)
T ss_pred CceEEEEECCCCCCHHHHHHHHHHHHHHCC--CeEEEEeccC
Confidence 655566664589999999999999999999 9999994443
No 423
>cd00757 ThiF_MoeB_HesA_family ThiF_MoeB_HesA. Family of E1-like enzymes involved in molybdopterin and thiamine biosynthesis family. The common reaction mechanism catalyzed by MoeB and ThiF, like other E1 enzymes, begins with a nucleophilic attack of the C-terminal carboxylate of MoaD and ThiS, respectively, on the alpha-phosphate of an ATP molecule bound at the active site of the activating enzymes, leading to the formation of a high-energy acyladenylate intermediate and subsequently to the formation of a thiocarboxylate at the C termini of MoaD and ThiS. MoeB, as the MPT synthase (MoaE/MoaD complex) sulfurase, is involved in the biosynthesis of the molybdenum cofactor, a derivative of the tricyclic pterin, molybdopterin (MPT). ThiF catalyzes the adenylation of ThiS, as part of the biosynthesis pathway of thiamin pyrophosphate (vitamin B1).
Probab=20.46 E-value=4.2e+02 Score=23.76 Aligned_cols=31 Identities=0% Similarity=0.031 Sum_probs=23.4
Q ss_pred cceEEEecCCCccCHHHHHHHHHHHHhCCCCcEEEEE
Q 044031 2 KKTIALYPGPAFHHMISMVELGKLILQHRSDVSITIL 38 (468)
Q Consensus 2 ~~~Iv~~~~~~~GHv~P~l~LA~~L~~~G~~h~Vt~~ 38 (468)
+.||+++-.++-|. .+|+.|+..|- .+++++
T Consensus 21 ~~~VlivG~GglGs-----~va~~La~~Gv-g~i~lv 51 (228)
T cd00757 21 NARVLVVGAGGLGS-----PAAEYLAAAGV-GKLGLV 51 (228)
T ss_pred CCcEEEECCCHHHH-----HHHHHHHHcCC-CEEEEE
Confidence 35788888887775 78899999992 366666
No 424
>TIGR03325 BphB_TodD cis-2,3-dihydrobiphenyl-2,3-diol dehydrogenase. Members of this family occur as the BphD protein of biphenyl catabolism and as the TodD protein of toluene catabolism. Members catalyze the second step in each pathway and proved interchangeable when tested; the first and fourth enzymes in each pathway confer metabolic specificity. In the context of biphenyl degradation, the enzyme acts as cis-2,3-dihydrobiphenyl-2,3-diol dehydrogenase (EC 1.3.1.56), while in toluene degradation it acts as cis-toluene dihydrodiol dehydrogenase.
Probab=20.39 E-value=1.6e+02 Score=26.80 Aligned_cols=32 Identities=13% Similarity=0.088 Sum_probs=25.3
Q ss_pred ceEEEecCCCccCHHHHHHHHHHHHhCCCCcEEEEEe
Q 044031 3 KTIALYPGPAFHHMISMVELGKLILQHRSDVSITILV 39 (468)
Q Consensus 3 ~~Iv~~~~~~~GHv~P~l~LA~~L~~~G~~h~Vt~~~ 39 (468)
.+.++++.++.| =..++|+.|+++| ++|.++.
T Consensus 5 ~k~vlItGas~g---IG~~ia~~l~~~G--~~V~~~~ 36 (262)
T TIGR03325 5 GEVVLVTGGASG---LGRAIVDRFVAEG--ARVAVLD 36 (262)
T ss_pred CcEEEEECCCCh---HHHHHHHHHHHCC--CEEEEEe
Confidence 468888866654 3688999999999 9998873
No 425
>PRK10818 cell division inhibitor MinD; Provisional
Probab=20.36 E-value=1.7e+02 Score=26.90 Aligned_cols=40 Identities=13% Similarity=0.150 Sum_probs=32.0
Q ss_pred CcceEEEecC-CCccCHHHHHHHHHHHHhCCCCcEEEEEeCCC
Q 044031 1 MKKTIALYPG-PAFHHMISMVELGKLILQHRSDVSITILVPSM 42 (468)
Q Consensus 1 m~~~Iv~~~~-~~~GHv~P~l~LA~~L~~~G~~h~Vt~~~~~~ 42 (468)
|...|+++.. |+-|-..-...||..|+++| ++|.++-.+.
T Consensus 1 m~kviav~s~KGGvGKTt~a~nlA~~la~~g--~~vllvD~D~ 41 (270)
T PRK10818 1 MARIIVVTSGKGGVGKTTSSAAIATGLAQKG--KKTVVIDFDI 41 (270)
T ss_pred CceEEEEEeCCCCCcHHHHHHHHHHHHHHCC--CeEEEEECCC
Confidence 6444555553 79999999999999999999 9999995544
No 426
>PF08030 NAD_binding_6: Ferric reductase NAD binding domain; InterPro: IPR013121 This entry contains ferric reductase NAD binding proteins.; GO: 0016491 oxidoreductase activity, 0055114 oxidation-reduction process; PDB: 3A1F_A.
Probab=20.30 E-value=55 Score=27.20 Aligned_cols=38 Identities=29% Similarity=0.446 Sum_probs=28.2
Q ss_pred eEEeccCCCcCCCHHHHHHHHHHHH-----hCCCcEEEEEeCC
Q 044031 272 VVFLCFGSRGTFSAPQLKEIAIGLE-----RSNQRFLWVVRNP 309 (468)
Q Consensus 272 ~v~vs~GS~~~~~~~~~~~~~~al~-----~~~~~~l~~~~~~ 309 (468)
+|+|+.|+-...-...+..++...+ .....|+|+++..
T Consensus 4 vvlvAGG~GIt~~l~~l~~l~~~~~~~~~~~~~i~lvW~vR~~ 46 (156)
T PF08030_consen 4 VVLVAGGSGITPILPILRDLLQRQNRGSSRTRRIKLVWVVRDA 46 (156)
T ss_dssp EEEEEEGGGHHHHHHHHHHHHHHHHTT-----EEEEEEEES-T
T ss_pred EEEEecCcCHHHHHHHHHHHHHhhccccccccceEEEEeeCch
Confidence 8999999987776777777777766 2346899999975
No 427
>PRK12744 short chain dehydrogenase; Provisional
Probab=20.28 E-value=3e+02 Score=24.88 Aligned_cols=32 Identities=9% Similarity=0.007 Sum_probs=23.7
Q ss_pred eEEEecCCCccCHHHHHHHHHHHHhCCCCcEEEEEeC
Q 044031 4 TIALYPGPAFHHMISMVELGKLILQHRSDVSITILVP 40 (468)
Q Consensus 4 ~Iv~~~~~~~GHv~P~l~LA~~L~~~G~~h~Vt~~~~ 40 (468)
+.++++.++.| =..++|+.|+++| ++|.++..
T Consensus 9 k~vlItGa~~g---IG~~~a~~l~~~G--~~vv~i~~ 40 (257)
T PRK12744 9 KVVLIAGGAKN---LGGLIARDLAAQG--AKAVAIHY 40 (257)
T ss_pred cEEEEECCCch---HHHHHHHHHHHCC--CcEEEEec
Confidence 56777755554 5678999999999 99766643
No 428
>cd03784 GT1_Gtf_like This family includes the Gtfs, a group of homologous glycosyltransferases involved in the final stages of the biosynthesis of antibiotics vancomycin and related chloroeremomycin. Gtfs transfer sugar moieties from an activated NDP-sugar donor to the oxidatively cross-linked heptapeptide core of vancomycin group antibiotics. The core structure is important for the bioactivity of the antibiotics.
Probab=20.23 E-value=4.2e+02 Score=25.94 Aligned_cols=36 Identities=22% Similarity=0.296 Sum_probs=27.0
Q ss_pred eEEeccCCCcCCCHHHHHHHHHHHHhCCCcEEEEEeCC
Q 044031 272 VVFLCFGSRGTFSAPQLKEIAIGLERSNQRFLWVVRNP 309 (468)
Q Consensus 272 ~v~vs~GS~~~~~~~~~~~~~~al~~~~~~~l~~~~~~ 309 (468)
++++++|+.+... -+..++++|.+.|..+.+.+...
T Consensus 3 Il~~~~p~~GHv~--P~l~la~~L~~rGh~V~~~t~~~ 38 (401)
T cd03784 3 VLITTIGSRGDVQ--PLVALAWALRAAGHEVRVATPPE 38 (401)
T ss_pred EEEEeCCCcchHH--HHHHHHHHHHHCCCeEEEeeCHh
Confidence 7888888876433 35678888888888888877653
No 429
>COG0859 RfaF ADP-heptose:LPS heptosyltransferase [Cell envelope biogenesis, outer membrane]
Probab=20.19 E-value=3.5e+02 Score=25.99 Aligned_cols=96 Identities=16% Similarity=0.163 Sum_probs=53.5
Q ss_pred ceEEEecCCCcc-----CHHHHHHHHHHHHhCCCCcEEEEEeCCCCCCchhhhhhhhccccCCCCCeeEEEcCCCCCCCC
Q 044031 3 KTIALYPGPAFH-----HMISMVELGKLILQHRSDVSITILVPSMPLEESKTCSYINSISHRLNPIISFYYLPAIQMPSE 77 (468)
Q Consensus 3 ~~Iv~~~~~~~G-----Hv~P~l~LA~~L~~~G~~h~Vt~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~i~~~~lp~~ 77 (468)
+-|++.|..+.| -..=+..|++.|.++| .+|.++.+. .+.. ..+.+.... .+.. . +. +
T Consensus 176 ~~i~i~pg~s~~~~K~wp~e~~~~l~~~l~~~~--~~Vvl~g~~--~e~e-~~~~i~~~~----~~~~-~-l~------~ 238 (334)
T COG0859 176 PYIVINPGASRGSAKRWPLEHYAELAELLIAKG--YQVVLFGGP--DEEE-RAEEIAKGL----PNAV-I-LA------G 238 (334)
T ss_pred CeEEEeccccccccCCCCHHHHHHHHHHHHHCC--CEEEEecCh--HHHH-HHHHHHHhc----CCcc-c-cC------C
Confidence 456777762332 3456888999999999 999888654 2222 111111110 0000 0 00 0
Q ss_pred CCChhHHHHHHHHHhhHHHHHHHHhhhcCCCccEEEe--cCcHHHhhhCCCCeEEEec
Q 044031 78 TLSRADIAIESIKLNSSNVFQALENISLTSKILSFII--TSTTSFSYHPNIPTYTYFN 133 (468)
Q Consensus 78 ~~~~~~~~~~~~~~~~~~l~~ll~~~~~~~~pD~vI~--~~~~~vA~~lgIP~i~~~~ 133 (468)
.....++..++. ..|++|+ +...-+|..+|.|.+.++.
T Consensus 239 ------------k~sL~e~~~li~------~a~l~I~~DSg~~HlAaA~~~P~I~iyg 278 (334)
T COG0859 239 ------------KTSLEELAALIA------GADLVIGNDSGPMHLAAALGTPTIALYG 278 (334)
T ss_pred ------------CCCHHHHHHHHh------cCCEEEccCChHHHHHHHcCCCEEEEEC
Confidence 011122223332 7899999 5555599999999998765
No 430
>PF06491 Disulph_isomer: Disulphide isomerase; InterPro: IPR009474 This entry consists of several hypothetical bacterial proteins of unknown function.; PDB: 3FHK_F.
Probab=20.16 E-value=92 Score=25.24 Aligned_cols=51 Identities=14% Similarity=0.144 Sum_probs=32.3
Q ss_pred CccCHHHHHHHHHHHHhCCCCcEEEEEeCCCCCCchhhhhhhhccccCCCCCe
Q 044031 12 AFHHMISMVELGKLILQHRSDVSITILVPSMPLEESKTCSYINSISHRLNPII 64 (468)
Q Consensus 12 ~~GHv~P~l~LA~~L~~~G~~h~Vt~~~~~~~~~~~~~~~~~~~~~~~~~~~i 64 (468)
+.|-..|....|-.- ..-|||-||++...........+.+...++. ++|.+
T Consensus 49 Aag~ARPa~~~al~~-~kkPD~lvTVFAGqDkEAt~~aR~yf~~~pP-SSPS~ 99 (136)
T PF06491_consen 49 AAGNARPAAAMALQN-DKKPDHLVTVFAGQDKEATAKAREYFEPYPP-SSPSI 99 (136)
T ss_dssp HHHTHHHHHHHHHHH-SS--SEEEEEETTTSHHHHHHHHHTSTTS----SSEE
T ss_pred cccccCHHHHHHHhC-CCCCCceEEeccCCCHHHHHHHHHhcCCCCC-CCchh
Confidence 678889999888777 6669999999966554444455566655544 44433
No 431
>PRK14099 glycogen synthase; Provisional
Probab=20.12 E-value=1.6e+02 Score=30.15 Aligned_cols=38 Identities=16% Similarity=0.060 Sum_probs=27.4
Q ss_pred ceEEEecCC------CccCHHHHHHHHHHHHhCCCCcEEEEEeCCC
Q 044031 3 KTIALYPGP------AFHHMISMVELGKLILQHRSDVSITILVPSM 42 (468)
Q Consensus 3 ~~Iv~~~~~------~~GHv~P~l~LA~~L~~~G~~h~Vt~~~~~~ 42 (468)
++|++++.= +.|=-.-.-.|.+.|+++| |+|.++.+..
T Consensus 4 ~~il~v~~E~~p~~k~ggl~dv~~~lp~~l~~~g--~~v~v~~P~y 47 (485)
T PRK14099 4 LRVLSVASEIFPLIKTGGLADVAGALPAALKAHG--VEVRTLVPGY 47 (485)
T ss_pred cEEEEEEeccccccCCCcHHHHHHHHHHHHHHCC--CcEEEEeCCC
Confidence 578887641 2233344668899999999 9999997643
No 432
>PF13450 NAD_binding_8: NAD(P)-binding Rossmann-like domain; PDB: 3KA7_A 1V0J_D 3INR_B 3KYB_B 3GF4_A 2BI8_A 3INT_B 1WAM_A 2BI7_A 3MJ4_G ....
Probab=20.05 E-value=1.2e+02 Score=21.16 Aligned_cols=18 Identities=6% Similarity=0.117 Sum_probs=16.2
Q ss_pred HHHHHHHHHhCCCCcEEEEE
Q 044031 19 MVELGKLILQHRSDVSITIL 38 (468)
Q Consensus 19 ~l~LA~~L~~~G~~h~Vt~~ 38 (468)
-+..|..|+++| ++|+++
T Consensus 8 Gl~aA~~L~~~g--~~v~v~ 25 (68)
T PF13450_consen 8 GLAAAYYLAKAG--YRVTVF 25 (68)
T ss_dssp HHHHHHHHHHTT--SEEEEE
T ss_pred HHHHHHHHHHCC--CcEEEE
Confidence 477899999999 999999
Done!