Query 044031
Match_columns 468
No_of_seqs 169 out of 1582
Neff 9.8
Searched_HMMs 29240
Date Mon Mar 25 18:46:50 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/044031.a3m -d /work/01045/syshi/HHdatabase/pdb70.hhm -o /work/01045/syshi/hhsearch_pdb/044031hhsearch_pdb -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 3hbf_A Flavonoid 3-O-glucosylt 100.0 4.2E-73 1.4E-77 563.8 40.8 431 2-467 13-453 (454)
2 2vch_A Hydroquinone glucosyltr 100.0 3.8E-67 1.3E-71 529.7 47.7 441 3-467 7-468 (480)
3 2acv_A Triterpene UDP-glucosyl 100.0 4.9E-64 1.7E-68 505.1 43.0 433 3-467 10-462 (463)
4 2pq6_A UDP-glucuronosyl/UDP-gl 100.0 5.1E-64 1.7E-68 508.5 39.9 438 3-467 9-478 (482)
5 2c1x_A UDP-glucose flavonoid 3 100.0 9.7E-64 3.3E-68 501.6 40.6 431 3-467 8-451 (456)
6 2iya_A OLEI, oleandomycin glyc 100.0 7.6E-41 2.6E-45 334.5 28.8 366 3-445 13-405 (424)
7 4amg_A Snogd; transferase, pol 100.0 4.4E-41 1.5E-45 333.5 26.6 337 3-445 23-384 (400)
8 1iir_A Glycosyltransferase GTF 100.0 2.2E-39 7.6E-44 322.8 26.3 354 3-444 1-383 (415)
9 1rrv_A Glycosyltransferase GTF 100.0 8.3E-39 2.8E-43 318.8 24.3 350 3-444 1-384 (416)
10 3h4t_A Glycosyltransferase GTF 100.0 2.6E-36 8.8E-41 299.4 27.3 334 4-442 2-364 (404)
11 3rsc_A CALG2; TDP, enediyne, s 100.0 2.5E-35 8.6E-40 293.6 26.3 354 2-445 20-397 (415)
12 3ia7_A CALG4; glycosysltransfe 100.0 7.3E-35 2.5E-39 288.8 25.4 368 1-464 2-395 (402)
13 2iyf_A OLED, oleandomycin glyc 100.0 2E-34 6.7E-39 288.5 27.5 352 3-445 8-383 (430)
14 2p6p_A Glycosyl transferase; X 100.0 8.1E-34 2.8E-38 279.8 29.1 346 4-465 2-377 (384)
15 2yjn_A ERYCIII, glycosyltransf 100.0 1.2E-33 4E-38 283.7 29.8 347 3-445 21-419 (441)
16 3s2u_A UDP-N-acetylglucosamine 100.0 1.5E-31 5.2E-36 260.9 24.1 319 1-439 1-338 (365)
17 3oti_A CALG3; calicheamicin, T 100.0 2.1E-31 7.1E-36 263.8 24.1 330 2-445 20-381 (398)
18 4fzr_A SSFS6; structural genom 100.0 4.4E-31 1.5E-35 261.5 23.0 337 3-445 16-384 (398)
19 3tsa_A SPNG, NDP-rhamnosyltran 100.0 1.4E-29 4.6E-34 250.1 22.4 160 260-445 208-372 (391)
20 3otg_A CALG1; calicheamicin, T 100.0 2.1E-28 7.2E-33 243.2 24.5 346 2-445 20-392 (412)
21 2o6l_A UDP-glucuronosyltransfe 99.9 3.5E-27 1.2E-31 204.7 16.9 162 256-444 7-169 (170)
22 1f0k_A MURG, UDP-N-acetylgluco 99.8 1.1E-18 3.8E-23 170.0 25.9 310 3-436 7-334 (364)
23 2jzc_A UDP-N-acetylglucosamine 99.6 4.2E-15 1.4E-19 132.1 10.6 121 268-396 26-185 (224)
24 3hbm_A UDP-sugar hydrolase; PS 99.5 4E-12 1.4E-16 117.7 19.4 116 270-397 157-274 (282)
25 3c48_A Predicted glycosyltrans 99.2 3.4E-09 1.2E-13 105.3 26.7 353 3-442 21-408 (438)
26 1vgv_A UDP-N-acetylglucosamine 99.2 7E-10 2.4E-14 108.3 20.6 138 270-435 205-352 (384)
27 3okp_A GDP-mannose-dependent a 99.2 7.5E-09 2.6E-13 101.1 26.1 326 2-440 4-359 (394)
28 1v4v_A UDP-N-acetylglucosamine 99.2 6.6E-10 2.2E-14 108.2 18.1 130 270-428 198-336 (376)
29 3ot5_A UDP-N-acetylglucosamine 99.2 1.2E-09 4.2E-14 107.2 20.0 161 269-466 223-392 (403)
30 2gek_A Phosphatidylinositol ma 99.1 3.6E-08 1.2E-12 96.7 26.5 143 272-440 209-364 (406)
31 2iw1_A Lipopolysaccharide core 99.1 8.5E-09 2.9E-13 100.0 21.2 159 271-465 196-370 (374)
32 2jjm_A Glycosyl transferase, g 99.1 2.6E-08 8.9E-13 97.5 23.7 330 1-440 14-365 (394)
33 3dzc_A UDP-N-acetylglucosamine 99.1 3.7E-09 1.3E-13 103.6 17.0 132 269-428 229-369 (396)
34 3fro_A GLGA glycogen synthase; 99.1 4.6E-07 1.6E-11 89.6 32.5 146 272-441 252-412 (439)
35 2r60_A Glycosyl transferase, g 99.0 4.9E-08 1.7E-12 98.8 24.5 147 272-440 263-439 (499)
36 3beo_A UDP-N-acetylglucosamine 99.0 7.4E-08 2.5E-12 93.4 21.8 132 269-428 204-344 (375)
37 2iuy_A Avigt4, glycosyltransfe 98.8 1.1E-07 3.8E-12 91.0 17.2 128 273-425 164-307 (342)
38 4hwg_A UDP-N-acetylglucosamine 98.8 4.7E-08 1.6E-12 95.1 13.0 156 270-464 203-372 (385)
39 2x6q_A Trehalose-synthase TRET 98.7 5.6E-06 1.9E-10 81.4 25.9 146 272-440 232-394 (416)
40 3s28_A Sucrose synthase 1; gly 98.6 4.1E-06 1.4E-10 88.5 21.0 94 327-440 639-749 (816)
41 2f9f_A First mannosyl transfer 98.4 1.3E-06 4.4E-11 75.1 11.2 131 272-428 24-164 (177)
42 1rzu_A Glycogen synthase 1; gl 98.4 9.1E-05 3.1E-09 74.2 24.4 139 272-436 292-454 (485)
43 2vsy_A XCC0866; transferase, g 98.3 0.00036 1.2E-08 71.4 28.7 95 328-439 434-536 (568)
44 2qzs_A Glycogen synthase; glyc 98.2 0.00022 7.6E-09 71.4 23.8 139 272-436 293-455 (485)
45 3q3e_A HMW1C-like glycosyltran 97.7 0.00049 1.7E-08 69.7 14.4 153 270-439 440-602 (631)
46 2bfw_A GLGA glycogen synthase; 97.7 0.00085 2.9E-08 58.2 14.4 92 329-441 96-197 (200)
47 3qhp_A Type 1 capsular polysac 97.7 0.00025 8.6E-09 59.6 10.3 139 272-441 3-156 (166)
48 2xci_A KDO-transferase, 3-deox 97.4 0.00093 3.2E-08 64.5 11.7 99 329-446 261-366 (374)
49 4gyw_A UDP-N-acetylglucosamine 97.3 0.0029 9.8E-08 66.5 14.9 152 269-436 521-679 (723)
50 3oy2_A Glycosyltransferase B73 97.3 0.0031 1.1E-07 61.4 13.9 144 271-439 184-369 (413)
51 3rhz_A GTF3, nucleotide sugar 96.9 0.0022 7.4E-08 60.9 8.1 111 329-466 215-337 (339)
52 1psw_A ADP-heptose LPS heptosy 96.2 0.13 4.4E-06 48.5 15.9 97 269-372 179-286 (348)
53 3tov_A Glycosyl transferase fa 96.1 0.19 6.6E-06 47.5 16.5 96 269-372 184-286 (349)
54 2x0d_A WSAF; GT4 family, trans 95.2 0.0061 2.1E-07 59.5 1.9 80 328-428 295-381 (413)
55 2hy7_A Glucuronosyltransferase 94.5 0.14 4.8E-06 49.6 9.6 77 327-427 264-353 (406)
56 3vue_A GBSS-I, granule-bound s 91.9 0.85 2.9E-05 45.9 10.7 135 272-425 328-476 (536)
57 1xmp_A PURE, phosphoribosylami 82.4 15 0.00051 30.1 10.4 147 270-448 11-164 (170)
58 1o4v_A Phosphoribosylaminoimid 80.6 23 0.00079 29.4 11.0 143 271-448 14-164 (183)
59 2gt1_A Lipopolysaccharide hept 80.6 2.2 7.4E-05 39.6 5.7 137 269-427 177-323 (326)
60 3nb0_A Glycogen [starch] synth 79.9 1.9 6.4E-05 44.2 5.2 47 330-376 495-552 (725)
61 3rg8_A Phosphoribosylaminoimid 79.1 16 0.00053 29.7 9.4 141 272-447 4-150 (159)
62 3oow_A Phosphoribosylaminoimid 77.9 11 0.00038 30.8 8.2 145 272-448 7-158 (166)
63 3dfz_A SIRC, precorrin-2 dehyd 77.8 5 0.00017 34.9 6.7 152 270-448 32-188 (223)
64 4grd_A N5-CAIR mutase, phospho 76.6 15 0.00053 30.1 8.7 146 269-448 11-165 (173)
65 1uqt_A Alpha, alpha-trehalose- 76.4 21 0.00073 35.0 11.7 73 332-427 336-420 (482)
66 3trh_A Phosphoribosylaminoimid 74.3 26 0.00089 28.7 9.5 145 272-448 8-159 (169)
67 3ors_A N5-carboxyaminoimidazol 73.6 21 0.00073 29.0 8.8 145 272-448 5-156 (163)
68 3kuu_A Phosphoribosylaminoimid 73.2 15 0.00052 30.2 7.9 144 272-448 14-165 (174)
69 3lp6_A Phosphoribosylaminoimid 73.0 37 0.0013 27.9 10.1 144 271-448 8-158 (174)
70 3qjg_A Epidermin biosynthesis 72.0 4.1 0.00014 34.0 4.4 39 1-42 4-42 (175)
71 3lrx_A Putative hydrogenase; a 70.9 32 0.0011 27.7 9.7 48 4-56 25-72 (158)
72 3lyu_A Putative hydrogenase; t 68.6 33 0.0011 27.1 9.1 48 4-56 20-67 (142)
73 1u11_A PURE (N5-carboxyaminoim 68.5 50 0.0017 27.4 10.6 144 272-448 23-174 (182)
74 3t5t_A Putative glycosyltransf 66.2 31 0.0011 33.9 10.0 109 329-467 353-471 (496)
75 3hyw_A Sulfide-quinone reducta 65.6 3.9 0.00013 39.6 3.5 36 1-41 1-36 (430)
76 4b4k_A N5-carboxyaminoimidazol 65.2 58 0.002 26.9 13.1 148 270-448 22-175 (181)
77 1ccw_A Protein (glutamate muta 64.1 7.3 0.00025 30.9 4.3 41 1-43 1-42 (137)
78 1g63_A Epidermin modifying enz 63.3 5.6 0.00019 33.3 3.6 39 1-42 1-39 (181)
79 3vue_A GBSS-I, granule-bound s 62.5 5.3 0.00018 40.0 3.9 36 3-42 10-53 (536)
80 2x0d_A WSAF; GT4 family, trans 60.6 4.6 0.00016 38.9 2.9 39 2-42 46-89 (413)
81 3icc_A Putative 3-oxoacyl-(acy 57.8 60 0.0021 28.1 9.8 34 2-40 6-39 (255)
82 2bw0_A 10-FTHFDH, 10-formyltet 57.0 53 0.0018 30.3 9.4 33 1-40 21-53 (329)
83 1mio_A Nitrogenase molybdenum 56.1 40 0.0014 33.5 8.9 33 94-130 446-479 (533)
84 3auf_A Glycinamide ribonucleot 54.6 80 0.0027 27.3 9.6 104 2-134 22-132 (229)
85 3zqu_A Probable aromatic acid 52.9 19 0.00065 30.8 5.2 37 2-41 4-40 (209)
86 3tqq_A Methionyl-tRNA formyltr 50.8 1.2E+02 0.004 27.7 10.6 98 1-134 1-111 (314)
87 2h31_A Multifunctional protein 50.3 1.8E+02 0.006 27.8 12.0 84 270-375 265-353 (425)
88 2ejb_A Probable aromatic acid 49.7 28 0.00097 29.2 5.7 38 2-42 1-38 (189)
89 2wqk_A 5'-nucleotidase SURE; S 49.0 26 0.00087 31.0 5.6 36 3-43 2-38 (251)
90 3fwz_A Inner membrane protein 48.3 11 0.00036 29.8 2.8 33 1-40 6-38 (140)
91 3i83_A 2-dehydropantoate 2-red 48.1 13 0.00046 34.1 3.8 33 1-40 1-33 (320)
92 3hn2_A 2-dehydropantoate 2-red 47.7 14 0.00049 33.8 3.9 33 1-40 1-33 (312)
93 1yt5_A Inorganic polyphosphate 47.4 14 0.00049 32.8 3.7 28 347-374 42-72 (258)
94 1id1_A Putative potassium chan 46.9 12 0.00041 29.9 2.9 32 2-40 3-34 (153)
95 3osu_A 3-oxoacyl-[acyl-carrier 46.5 67 0.0023 27.8 8.1 34 2-40 3-36 (246)
96 3u7q_B Nitrogenase molybdenum- 45.1 98 0.0033 30.6 9.7 33 95-131 429-469 (523)
97 2lnd_A De novo designed protei 44.6 27 0.00092 24.3 3.8 49 365-425 50-100 (112)
98 1jx7_A Hypothetical protein YC 44.1 27 0.00093 26.2 4.5 39 1-41 1-43 (117)
99 2yxb_A Coenzyme B12-dependent 43.9 20 0.00067 29.3 3.8 39 3-43 19-57 (161)
100 3s2u_A UDP-N-acetylglucosamine 43.7 27 0.00093 32.7 5.3 36 272-309 5-40 (365)
101 2r85_A PURP protein PF1517; AT 43.0 18 0.00063 33.1 3.9 32 1-40 1-32 (334)
102 3tov_A Glycosyl transferase fa 42.9 1.4E+02 0.0047 27.5 10.0 97 4-134 187-289 (349)
103 2i2x_B MTAC, methyltransferase 42.0 28 0.00096 30.9 4.8 41 3-45 124-164 (258)
104 3pdi_B Nitrogenase MOFE cofact 41.7 22 0.00075 34.6 4.3 32 96-131 367-399 (458)
105 3vot_A L-amino acid ligase, BL 41.4 1.1E+02 0.0037 29.1 9.3 33 3-42 6-38 (425)
106 2ywx_A Phosphoribosylaminoimid 41.2 1.4E+02 0.0048 24.1 10.4 139 273-448 2-146 (157)
107 1y80_A Predicted cobalamin bin 41.1 29 0.001 29.5 4.6 39 3-43 89-127 (210)
108 3ius_A Uncharacterized conserv 41.0 23 0.00078 31.6 4.1 33 1-40 4-36 (286)
109 4gbj_A 6-phosphogluconate dehy 40.7 23 0.00077 32.2 4.0 32 1-39 4-35 (297)
110 3ego_A Probable 2-dehydropanto 40.6 16 0.00055 33.4 3.0 31 1-39 1-31 (307)
111 2iz6_A Molybdenum cofactor car 40.0 62 0.0021 26.8 6.2 45 331-375 92-140 (176)
112 1sbz_A Probable aromatic acid 39.8 37 0.0013 28.7 4.9 35 4-41 2-37 (197)
113 1ooe_A Dihydropteridine reduct 39.1 44 0.0015 28.7 5.6 35 1-40 1-35 (236)
114 1efp_B ETF, protein (electron 39.1 1.2E+02 0.0042 26.5 8.5 35 95-133 104-148 (252)
115 3l6e_A Oxidoreductase, short-c 39.0 31 0.0011 29.8 4.6 34 1-39 1-34 (235)
116 1xmp_A PURE, phosphoribosylami 39.0 71 0.0024 26.1 6.2 37 1-38 10-46 (170)
117 3av3_A Phosphoribosylglycinami 38.2 1.8E+02 0.0063 24.6 10.0 104 2-134 3-113 (212)
118 1qgu_B Protein (nitrogenase mo 37.5 1.6E+02 0.0056 28.9 10.0 33 95-131 425-465 (519)
119 4b4o_A Epimerase family protei 37.3 30 0.001 31.1 4.3 33 1-41 1-33 (298)
120 1iow_A DD-ligase, DDLB, D-ALA\ 37.1 42 0.0015 30.1 5.4 39 1-41 1-43 (306)
121 1pjq_A CYSG, siroheme synthase 36.8 85 0.0029 30.4 7.7 150 270-448 13-170 (457)
122 1u0t_A Inorganic polyphosphate 35.8 48 0.0016 30.2 5.4 27 348-374 77-107 (307)
123 4dzz_A Plasmid partitioning pr 35.6 1.3E+02 0.0045 24.7 8.0 39 1-42 1-40 (206)
124 3pdi_A Nitrogenase MOFE cofact 35.6 24 0.00081 34.7 3.5 33 95-131 392-425 (483)
125 3v2h_A D-beta-hydroxybutyrate 35.4 45 0.0015 29.8 5.1 33 2-39 24-56 (281)
126 3ezx_A MMCP 1, monomethylamine 35.3 46 0.0016 28.5 4.9 41 3-45 93-133 (215)
127 3lqk_A Dipicolinate synthase s 35.1 41 0.0014 28.5 4.5 37 3-42 8-45 (201)
128 1z82_A Glycerol-3-phosphate de 34.8 26 0.00088 32.3 3.5 32 1-39 13-44 (335)
129 2ywr_A Phosphoribosylglycinami 34.3 2.2E+02 0.0074 24.2 12.3 86 2-116 1-89 (216)
130 3da8_A Probable 5'-phosphoribo 33.9 1.5E+02 0.0052 25.3 7.9 84 1-114 11-95 (215)
131 4egb_A DTDP-glucose 4,6-dehydr 33.7 2.6E+02 0.0091 25.1 10.8 32 5-39 26-57 (346)
132 3g17_A Similar to 2-dehydropan 33.7 13 0.00044 33.7 1.2 34 1-41 1-34 (294)
133 4e5s_A MCCFLIKE protein (BA_56 33.5 48 0.0016 30.6 5.0 75 282-375 61-137 (331)
134 2ew2_A 2-dehydropantoate 2-red 33.4 27 0.00093 31.6 3.4 32 1-39 2-33 (316)
135 1uan_A Hypothetical protein TT 33.1 2.2E+02 0.0077 24.2 9.1 92 1-114 1-101 (227)
136 3kuu_A Phosphoribosylaminoimid 33.1 1.1E+02 0.0037 25.2 6.3 37 1-38 11-47 (174)
137 3u7q_A Nitrogenase molybdenum- 32.5 28 0.00095 34.3 3.4 33 95-131 408-441 (492)
138 1g5t_A COB(I)alamin adenosyltr 32.4 2.2E+02 0.0076 23.8 11.9 38 3-42 29-66 (196)
139 2q5c_A NTRC family transcripti 32.2 33 0.0011 28.9 3.4 44 94-138 129-173 (196)
140 3mc3_A DSRE/DSRF-like family p 32.1 52 0.0018 25.6 4.4 29 12-42 28-56 (134)
141 3r6d_A NAD-dependent epimerase 32.0 46 0.0016 28.2 4.4 33 3-40 5-38 (221)
142 3mcu_A Dipicolinate synthase, 31.7 41 0.0014 28.7 3.9 37 3-42 6-43 (207)
143 2gt1_A Lipopolysaccharide hept 31.2 36 0.0012 31.1 3.8 39 4-42 2-40 (326)
144 3rft_A Uronate dehydrogenase; 30.9 78 0.0027 27.7 6.0 36 1-41 1-36 (267)
145 1q1v_A DEK protein; winged-hel 30.9 87 0.003 21.4 4.7 53 409-465 10-64 (70)
146 3imf_A Short chain dehydrogena 30.9 51 0.0017 28.8 4.7 34 1-39 4-37 (257)
147 3tqr_A Phosphoribosylglycinami 30.8 2.3E+02 0.0079 24.1 8.6 84 2-114 5-89 (215)
148 4ds3_A Phosphoribosylglycinami 30.7 2.5E+02 0.0084 23.8 9.3 86 2-114 7-92 (209)
149 2qx0_A 7,8-dihydro-6-hydroxyme 30.4 59 0.002 26.4 4.5 28 272-299 3-30 (159)
150 3kcq_A Phosphoribosylglycinami 30.3 2.1E+02 0.0072 24.3 8.3 81 2-114 8-88 (215)
151 2hy5_A Putative sulfurtransfer 30.3 61 0.0021 25.0 4.5 25 14-40 15-40 (130)
152 2r6j_A Eugenol synthase 1; phe 30.2 46 0.0016 30.1 4.4 34 3-42 12-45 (318)
153 3kkj_A Amine oxidase, flavin-c 29.9 28 0.00096 30.0 2.8 31 1-38 1-31 (336)
154 3gg2_A Sugar dehydrogenase, UD 29.7 34 0.0012 33.2 3.5 33 1-40 1-33 (450)
155 3m2p_A UDP-N-acetylglucosamine 29.7 53 0.0018 29.5 4.7 35 1-41 1-35 (311)
156 4g6h_A Rotenone-insensitive NA 29.7 25 0.00085 34.7 2.5 33 2-41 42-74 (502)
157 2ab0_A YAJL; DJ-1/THIJ superfa 29.6 90 0.0031 26.2 5.9 39 1-42 1-39 (205)
158 2i2c_A Probable inorganic poly 29.5 25 0.00084 31.5 2.3 28 347-374 36-69 (272)
159 3fbs_A Oxidoreductase; structu 29.2 32 0.0011 30.6 3.0 32 1-39 1-32 (297)
160 1f9y_A HPPK, protein (6-hydrox 29.2 54 0.0018 26.6 4.0 32 272-303 2-34 (158)
161 3ip0_A 2-amino-4-hydroxy-6-hyd 29.1 54 0.0018 26.6 4.0 28 272-299 2-29 (158)
162 3afo_A NADH kinase POS5; alpha 29.1 44 0.0015 31.7 4.0 34 339-374 109-147 (388)
163 3edm_A Short chain dehydrogena 29.0 97 0.0033 27.0 6.2 33 3-40 8-40 (259)
164 3sc6_A DTDP-4-dehydrorhamnose 28.9 30 0.001 30.8 2.8 33 1-39 4-36 (287)
165 1g3q_A MIND ATPase, cell divis 28.6 71 0.0024 27.2 5.2 40 1-42 1-41 (237)
166 2x5n_A SPRPN10, 26S proteasome 28.5 1.8E+02 0.0063 24.0 7.5 64 5-72 110-173 (192)
167 3ef6_A Toluene 1,2-dioxygenase 28.4 37 0.0013 32.3 3.4 37 1-42 1-37 (410)
168 3llv_A Exopolyphosphatase-rela 28.4 33 0.0011 26.7 2.7 31 3-40 7-37 (141)
169 1vpd_A Tartronate semialdehyde 28.1 53 0.0018 29.4 4.4 31 1-38 4-34 (299)
170 1mxh_A Pteridine reductase 2; 27.8 57 0.0019 28.8 4.5 34 2-40 10-43 (276)
171 2d1p_B TUSC, hypothetical UPF0 27.8 92 0.0032 23.5 5.1 38 1-40 1-40 (119)
172 2r8r_A Sensor protein; KDPD, P 27.7 78 0.0027 27.4 5.0 39 3-43 7-45 (228)
173 4hb9_A Similarities with proba 27.7 39 0.0013 31.7 3.5 29 3-38 2-30 (412)
174 3ijr_A Oxidoreductase, short c 27.4 89 0.003 27.9 5.7 34 2-40 46-79 (291)
175 4iin_A 3-ketoacyl-acyl carrier 27.1 92 0.0032 27.3 5.7 33 3-40 29-61 (271)
176 3oow_A Phosphoribosylaminoimid 27.1 1.4E+02 0.0047 24.3 6.0 37 1-38 4-40 (166)
177 1fy2_A Aspartyl dipeptidase; s 27.1 2E+02 0.007 24.6 7.8 46 257-304 21-66 (229)
178 4eg0_A D-alanine--D-alanine li 27.0 64 0.0022 29.2 4.8 37 1-39 12-52 (317)
179 1jkx_A GART;, phosphoribosylgl 27.0 2.9E+02 0.0098 23.4 9.4 103 3-134 1-110 (212)
180 1cbk_A Protein (7,8-dihydro-6- 26.9 58 0.002 26.5 3.8 28 272-299 3-30 (160)
181 4e08_A DJ-1 beta; flavodoxin-l 26.9 1.2E+02 0.004 25.0 6.0 39 1-42 4-42 (190)
182 1kyq_A Met8P, siroheme biosynt 26.7 1.5E+02 0.005 26.5 6.8 37 412-448 173-212 (274)
183 1qkk_A DCTD, C4-dicarboxylate 26.7 1.7E+02 0.0058 22.5 6.8 49 365-427 74-122 (155)
184 1u7z_A Coenzyme A biosynthesis 26.6 83 0.0028 27.2 5.0 24 13-40 33-56 (226)
185 3ucx_A Short chain dehydrogena 26.5 75 0.0026 27.8 5.0 33 2-39 10-42 (264)
186 2pju_A Propionate catabolism o 26.3 51 0.0017 28.5 3.6 40 93-133 140-180 (225)
187 3qbc_A 2-amino-4-hydroxy-6-hyd 26.3 65 0.0022 26.2 4.0 31 272-302 6-37 (161)
188 2gk4_A Conserved hypothetical 26.3 71 0.0024 27.7 4.5 25 13-41 28-52 (232)
189 3ro0_A Pyrrolidone-carboxylate 26.2 69 0.0024 27.6 4.4 28 1-28 1-30 (223)
190 1hyq_A MIND, cell division inh 25.5 65 0.0022 28.1 4.4 40 1-42 1-41 (263)
191 3sc4_A Short chain dehydrogena 25.3 87 0.003 27.8 5.2 35 2-41 8-42 (285)
192 3sju_A Keto reductase; short-c 25.3 69 0.0024 28.4 4.5 33 2-39 23-55 (279)
193 1ek6_A UDP-galactose 4-epimera 25.3 63 0.0022 29.5 4.4 34 1-40 1-34 (348)
194 3rkr_A Short chain oxidoreduct 25.2 79 0.0027 27.6 4.9 33 3-40 29-61 (262)
195 3h7a_A Short chain dehydrogena 25.2 74 0.0025 27.7 4.7 33 3-40 7-39 (252)
196 4h1h_A LMO1638 protein; MCCF-l 25.0 74 0.0025 29.2 4.7 74 282-374 61-136 (327)
197 3q9l_A Septum site-determining 25.0 69 0.0024 27.8 4.5 40 1-42 1-41 (260)
198 2pju_A Propionate catabolism o 25.0 85 0.0029 27.1 4.8 29 347-376 64-92 (225)
199 3obb_A Probable 3-hydroxyisobu 24.9 57 0.0019 29.6 3.9 30 1-38 3-32 (300)
200 3s55_A Putative short-chain de 24.8 73 0.0025 28.2 4.6 33 3-40 10-42 (281)
201 2l82_A Designed protein OR32; 24.8 1.3E+02 0.0043 22.3 4.8 34 272-309 3-36 (162)
202 2xws_A Sirohydrochlorin cobalt 24.7 1E+02 0.0036 23.5 5.0 41 1-41 2-44 (133)
203 1u9c_A APC35852; structural ge 24.7 1.3E+02 0.0046 25.4 6.2 40 1-42 4-52 (224)
204 2qs7_A Uncharacterized protein 24.7 93 0.0032 24.5 4.7 36 4-41 10-45 (144)
205 1e7w_A Pteridine reductase; di 24.7 76 0.0026 28.3 4.7 33 2-39 8-40 (291)
206 1p3y_1 MRSD protein; flavoprot 24.6 61 0.0021 27.2 3.7 36 3-41 9-44 (194)
207 2qq5_A DHRS1, dehydrogenase/re 24.6 77 0.0026 27.6 4.7 34 1-39 3-36 (260)
208 4iiu_A 3-oxoacyl-[acyl-carrier 24.6 1E+02 0.0036 26.9 5.6 33 3-40 26-58 (267)
209 1x1t_A D(-)-3-hydroxybutyrate 24.4 78 0.0027 27.6 4.7 34 1-39 2-35 (260)
210 1kjn_A MTH0777; hypotethical p 24.2 89 0.003 24.9 4.2 32 7-40 12-44 (157)
211 3da8_A Probable 5'-phosphoribo 24.2 2.5E+02 0.0086 23.9 7.6 69 289-375 79-147 (215)
212 3c1o_A Eugenol synthase; pheny 24.2 66 0.0022 29.0 4.3 34 2-41 4-37 (321)
213 3f8d_A Thioredoxin reductase ( 24.0 41 0.0014 30.2 2.8 32 2-40 15-46 (323)
214 3qha_A Putative oxidoreductase 24.0 47 0.0016 29.9 3.2 31 2-39 15-45 (296)
215 2an1_A Putative kinase; struct 24.0 39 0.0013 30.4 2.6 27 348-374 65-95 (292)
216 3pxx_A Carveol dehydrogenase; 24.0 77 0.0026 28.0 4.6 33 3-40 10-42 (287)
217 1v5e_A Pyruvate oxidase; oxido 23.9 1.7E+02 0.0057 29.4 7.5 27 347-373 69-101 (590)
218 2qk4_A Trifunctional purine bi 23.7 3.2E+02 0.011 25.9 9.4 33 1-40 23-56 (452)
219 3nks_A Protoporphyrinogen oxid 23.7 46 0.0016 32.1 3.2 31 1-38 1-33 (477)
220 1evy_A Glycerol-3-phosphate de 23.6 37 0.0013 31.7 2.4 32 1-39 13-45 (366)
221 3c24_A Putative oxidoreductase 23.6 57 0.0019 29.1 3.6 31 1-38 10-41 (286)
222 3l7i_A Teichoic acid biosynthe 23.5 1.5E+02 0.005 30.6 7.2 116 332-466 603-718 (729)
223 3ppi_A 3-hydroxyacyl-COA dehyd 23.4 80 0.0027 27.9 4.6 32 3-39 30-61 (281)
224 4dqx_A Probable oxidoreductase 23.3 82 0.0028 27.9 4.6 33 2-39 26-58 (277)
225 4b4k_A N5-carboxyaminoimidazol 23.3 1.9E+02 0.0064 23.9 6.2 53 1-56 21-73 (181)
226 3ksu_A 3-oxoacyl-acyl carrier 23.2 70 0.0024 28.1 4.1 32 3-39 11-42 (262)
227 4dgk_A Phytoene dehydrogenase; 23.2 34 0.0012 33.4 2.1 30 2-38 1-30 (501)
228 1d7o_A Enoyl-[acyl-carrier pro 23.0 92 0.0032 27.8 5.0 32 3-39 8-41 (297)
229 3kkl_A Probable chaperone prot 22.8 1.2E+02 0.0042 26.4 5.5 37 3-41 4-51 (244)
230 1ydn_A Hydroxymethylglutaryl-C 22.8 4E+02 0.014 23.6 10.9 26 283-308 23-48 (295)
231 3ia7_A CALG4; glycosysltransfe 22.8 1.3E+02 0.0046 27.7 6.3 35 272-308 7-41 (402)
232 3lf2_A Short chain oxidoreduct 22.6 87 0.003 27.4 4.6 32 3-39 8-39 (265)
233 3is3_A 17BETA-hydroxysteroid d 22.6 1.3E+02 0.0043 26.4 5.7 33 3-40 18-50 (270)
234 3f1l_A Uncharacterized oxidore 22.6 89 0.003 27.1 4.6 32 3-39 12-43 (252)
235 4da9_A Short-chain dehydrogena 22.5 1.3E+02 0.0043 26.6 5.7 32 3-39 29-60 (280)
236 2cob_A LCOR protein; MLR2, KIA 22.5 1.2E+02 0.0042 20.6 4.1 27 411-439 14-40 (70)
237 3grp_A 3-oxoacyl-(acyl carrier 22.5 91 0.0031 27.4 4.7 32 3-39 27-58 (266)
238 3tfo_A Putative 3-oxoacyl-(acy 22.5 91 0.0031 27.4 4.7 33 2-39 3-35 (264)
239 2ydy_A Methionine adenosyltran 22.4 80 0.0028 28.3 4.5 33 1-39 1-33 (315)
240 3gem_A Short chain dehydrogena 22.4 73 0.0025 27.9 4.0 33 3-40 27-59 (260)
241 3irs_A Uncharacterized protein 22.3 1.2E+02 0.0041 27.1 5.5 135 283-441 135-279 (291)
242 2vzf_A NADH-dependent FMN redu 22.2 1.1E+02 0.0037 25.4 4.9 36 1-38 1-40 (197)
243 4eso_A Putative oxidoreductase 22.2 90 0.0031 27.2 4.6 32 3-39 8-39 (255)
244 4dik_A Flavoprotein; TM0755, e 22.2 51 0.0017 31.5 3.1 46 259-304 254-299 (410)
245 1uls_A Putative 3-oxoacyl-acyl 22.1 92 0.0032 26.8 4.6 33 2-39 4-36 (245)
246 4ds3_A Phosphoribosylglycinami 22.0 2.1E+02 0.0071 24.2 6.6 69 289-375 76-144 (209)
247 1mio_B Nitrogenase molybdenum 22.0 60 0.0021 31.5 3.6 32 96-131 377-409 (458)
248 3l77_A Short-chain alcohol deh 22.0 97 0.0033 26.4 4.7 32 4-40 3-34 (235)
249 3e9m_A Oxidoreductase, GFO/IDH 21.9 4.4E+02 0.015 23.7 10.6 109 272-396 8-124 (330)
250 3zv4_A CIS-2,3-dihydrobiphenyl 21.9 90 0.0031 27.6 4.6 33 2-39 4-36 (281)
251 3c7a_A Octopine dehydrogenase; 21.8 38 0.0013 32.1 2.1 32 1-39 1-33 (404)
252 3sr3_A Microcin immunity prote 21.8 84 0.0029 29.0 4.4 75 282-375 62-138 (336)
253 4egf_A L-xylulose reductase; s 21.7 95 0.0032 27.2 4.7 33 3-40 20-52 (266)
254 3o1l_A Formyltetrahydrofolate 21.7 2.2E+02 0.0074 25.8 7.0 71 287-375 169-239 (302)
255 1zl0_A Hypothetical protein PA 21.6 1.7E+02 0.0059 26.6 6.4 76 281-375 62-139 (311)
256 3tzq_B Short-chain type dehydr 21.5 1.2E+02 0.0041 26.6 5.4 33 3-40 11-43 (271)
257 1p9o_A Phosphopantothenoylcyst 21.5 63 0.0022 29.5 3.4 23 18-42 67-89 (313)
258 4h15_A Short chain alcohol deh 21.5 98 0.0034 27.3 4.7 33 3-40 11-43 (261)
259 3gvc_A Oxidoreductase, probabl 21.4 1.1E+02 0.0037 27.1 5.0 32 3-39 29-60 (277)
260 1wrd_A TOM1, target of MYB pro 21.4 1.6E+02 0.0053 21.8 5.0 30 411-446 3-32 (103)
261 3e03_A Short chain dehydrogena 21.3 1.2E+02 0.004 26.7 5.3 35 2-41 5-39 (274)
262 3pgx_A Carveol dehydrogenase; 21.2 96 0.0033 27.4 4.6 33 3-40 15-47 (280)
263 3o26_A Salutaridine reductase; 21.2 94 0.0032 27.7 4.7 33 3-40 12-44 (311)
264 1eiw_A Hypothetical protein MT 21.1 1.5E+02 0.005 22.3 4.8 65 342-425 36-109 (111)
265 1hxh_A 3BETA/17BETA-hydroxyste 21.1 1E+02 0.0034 26.7 4.7 34 1-39 4-37 (253)
266 1vl8_A Gluconate 5-dehydrogena 21.0 1.1E+02 0.0036 26.9 4.8 34 2-40 20-53 (267)
267 3kcq_A Phosphoribosylglycinami 20.9 1.9E+02 0.0064 24.7 6.1 69 289-375 72-140 (215)
268 2nwq_A Probable short-chain de 20.9 88 0.003 27.6 4.3 33 1-39 20-52 (272)
269 3q2i_A Dehydrogenase; rossmann 20.9 4.6E+02 0.016 23.8 9.5 108 272-396 16-132 (354)
270 3tl4_X Glutaminyl-tRNA synthet 20.8 87 0.003 26.1 3.8 52 411-465 117-176 (187)
271 3rwb_A TPLDH, pyridoxal 4-dehy 20.7 1E+02 0.0035 26.6 4.6 32 2-38 5-36 (247)
272 4fn4_A Short chain dehydrogena 20.7 93 0.0032 27.4 4.3 33 2-39 6-38 (254)
273 3op4_A 3-oxoacyl-[acyl-carrier 20.7 1.1E+02 0.0036 26.5 4.7 32 3-39 9-40 (248)
274 4dmm_A 3-oxoacyl-[acyl-carrier 20.6 1E+02 0.0035 27.1 4.7 33 3-40 28-60 (269)
275 3un1_A Probable oxidoreductase 20.6 2.5E+02 0.0087 24.3 7.3 33 3-40 28-60 (260)
276 1qfj_A Protein (flavin reducta 20.6 88 0.003 26.6 4.1 63 4-69 104-166 (232)
277 3rd5_A Mypaa.01249.C; ssgcid, 20.6 1.1E+02 0.0036 27.3 4.8 33 2-39 15-47 (291)
278 2wsb_A Galactitol dehydrogenas 20.5 1.1E+02 0.0038 26.3 4.8 33 3-40 11-43 (254)
279 1zk4_A R-specific alcohol dehy 20.5 1.1E+02 0.0038 26.2 4.8 35 1-40 4-38 (251)
280 1qzu_A Hypothetical protein MD 20.5 86 0.0029 26.6 3.9 37 3-42 20-57 (206)
281 3db2_A Putative NADPH-dependen 20.5 4.1E+02 0.014 24.2 9.0 108 272-396 8-123 (354)
282 3g0o_A 3-hydroxyisobutyrate de 20.4 56 0.0019 29.5 2.9 30 2-38 7-36 (303)
283 2g1u_A Hypothetical protein TM 20.4 92 0.0031 24.6 3.9 31 3-40 20-50 (155)
284 3guy_A Short-chain dehydrogena 20.3 75 0.0026 27.1 3.6 30 5-39 3-32 (230)
285 3i1j_A Oxidoreductase, short c 20.3 1.3E+02 0.0045 25.7 5.3 33 2-39 13-45 (247)
286 2ew8_A (S)-1-phenylethanol deh 20.3 1.3E+02 0.0043 26.0 5.2 33 3-40 7-39 (249)
287 2pd6_A Estradiol 17-beta-dehyd 20.3 1E+02 0.0036 26.6 4.6 32 3-39 7-38 (264)
288 2xdq_B Light-independent proto 20.2 54 0.0018 32.4 2.9 33 95-131 363-396 (511)
289 3h28_A Sulfide-quinone reducta 20.2 66 0.0023 30.7 3.5 33 1-40 1-35 (430)
290 3uf0_A Short-chain dehydrogena 20.2 1E+02 0.0036 27.1 4.6 32 3-39 31-62 (273)
291 3tqr_A Phosphoribosylglycinami 20.2 2E+02 0.0068 24.5 6.2 69 289-375 73-141 (215)
292 3uve_A Carveol dehydrogenase ( 20.2 1E+02 0.0035 27.2 4.6 33 3-40 11-43 (286)
293 3t4x_A Oxidoreductase, short c 20.1 1.1E+02 0.0037 26.8 4.7 32 3-39 10-41 (267)
294 3gk3_A Acetoacetyl-COA reducta 20.1 1.4E+02 0.0048 26.0 5.5 33 2-39 24-56 (269)
295 3gpi_A NAD-dependent epimerase 20.1 1E+02 0.0035 27.1 4.6 34 1-41 1-35 (286)
296 3kjh_A CO dehydrogenase/acetyl 20.0 63 0.0021 27.8 3.1 37 4-42 2-38 (254)
No 1
>3hbf_A Flavonoid 3-O-glucosyltransferase; glycosyltransferase, GT-B fold, GT1, phenylpropanoid metabolism; HET: UDP MYC; 2.10A {Medicago truncatula} SCOP: c.87.1.0 PDB: 3hbj_A*
Probab=100.00 E-value=4.2e-73 Score=563.75 Aligned_cols=431 Identities=25% Similarity=0.409 Sum_probs=352.5
Q ss_pred cceEEEecCCCccCHHHHHHHHHHHHhCCCCcEEEEEeCCCCCCchhhhhhhhccccCCCCCeeEEEcCCCCCCCCCCCh
Q 044031 2 KKTIALYPGPAFHHMISMVELGKLILQHRSDVSITILVPSMPLEESKTCSYINSISHRLNPIISFYYLPAIQMPSETLSR 81 (468)
Q Consensus 2 ~~~Iv~~~~~~~GHv~P~l~LA~~L~~~G~~h~Vt~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~i~~~~lp~~~~~~ 81 (468)
++||+++|+|++||++|+++||++|+++|+++.|||+++.... ..+.+ .... ..++|+|..++++ +|++.+..
T Consensus 13 ~~hvv~~P~p~~GHi~P~l~Lak~L~~~g~~~~vT~~~t~~~~--~~~~~---~~~~-~~~~i~~~~ipdg-lp~~~~~~ 85 (454)
T 3hbf_A 13 LLHVAVLAFPFGTHAAPLLSLVKKIATEAPKVTFSFFCTTTTN--DTLFS---RSNE-FLPNIKYYNVHDG-LPKGYVSS 85 (454)
T ss_dssp CCEEEEECCCSSSSHHHHHHHHHHHHHHCTTSEEEEEECHHHH--HHSCS---SSSC-CCTTEEEEECCCC-CCTTCCCC
T ss_pred CCEEEEEcCCcccHHHHHHHHHHHHHhCCCCEEEEEEeCHHHH--Hhhhc---cccc-CCCCceEEecCCC-CCCCcccc
Confidence 4699999999999999999999999999988999999764211 11111 1000 2357999999977 77655432
Q ss_pred ---hHHHHHHHHHhhHHHHHHHHhhhc--CCCccEEEe----cCcHHHhhhCCCCeEEEecchhHHHHHHHhhhhhhhcc
Q 044031 82 ---ADIAIESIKLNSSNVFQALENISL--TSKILSFII----TSTTSFSYHPNIPTYTYFNSCASTLAAILYLPTLHNQI 152 (468)
Q Consensus 82 ---~~~~~~~~~~~~~~l~~ll~~~~~--~~~pD~vI~----~~~~~vA~~lgIP~i~~~~~~~~~~~~~~~~p~~~~~~ 152 (468)
...+..++......+++.++++.+ ..++||||+ +|+.++|+++|||++.|++++++.++.+++.+.+.+..
T Consensus 86 ~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~iI~D~~~~w~~~vA~~lgIP~~~f~t~~a~~~~~~~~~~~~~~~~ 165 (454)
T 3hbf_A 86 GNPREPIFLFIKAMQENFKHVIDEAVAETGKNITCLVTDAFFWFGADLAEEMHAKWVPLWTAGPHSLLTHVYTDLIREKT 165 (454)
T ss_dssp SCTTHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCEEEEETTCTTHHHHHHHTTCEEEEEECSCHHHHHHHHTHHHHHHTC
T ss_pred CChHHHHHHHHHHHHHHHHHHHHHHHhhcCCCCcEEEECCcchHHHHHHHHhCCCEEEEeCccHHHHHHHHhhHHHHhhc
Confidence 222444455555667777776543 358999999 89999999999999999999999999998887766532
Q ss_pred cCCCCCCCCccccCCCCCCCCCCCCCcccc-CCCchhHHHHHHHhhhhcccceEEecChhhhhHHHHHHHHcCcccCCCC
Q 044031 153 TSSFKDHPSSLLFIPGLPPVKSSFMPEPVL-DRQKPIYDFFLNYSTSLSKSNGIIINTFDFLEQQAIKAIVNGDCVTNGT 231 (468)
Q Consensus 153 ~~~~~~~~~~~~~~pg~~~~~~~~l~~~~~-~~~~~~~~~~~~~~~~~~~~~~~l~~s~~~le~~~~~~~~~~~~~~~~~ 231 (468)
.............+||+|+++.+++|..+. +.....++.+.+..+...+++++++||+++||+++++.+++..
T Consensus 166 ~~~~~~~~~~~~~iPg~p~~~~~dlp~~~~~~~~~~~~~~~~~~~~~~~~~~~vl~ns~~eLE~~~~~~~~~~~------ 239 (454)
T 3hbf_A 166 GSKEVHDVKSIDVLPGFPELKASDLPEGVIKDIDVPFATMLHKMGLELPRANAVAINSFATIHPLIENELNSKF------ 239 (454)
T ss_dssp CHHHHTTSSCBCCSTTSCCBCGGGSCTTSSSCTTSHHHHHHHHHHHHGGGSSCEEESSCGGGCHHHHHHHHTTS------
T ss_pred CCCccccccccccCCCCCCcChhhCchhhccCCchHHHHHHHHHHHhhccCCEEEECChhHhCHHHHHHHHhcC------
Confidence 110001112223489999999999998876 4445667777778888899999999999999999999988765
Q ss_pred CCCeeEecccccCCcCCCCCCCCCCcchhHHhhcCCCCCceEEeccCCCcCCCHHHHHHHHHHHHhCCCcEEEEEeCCCC
Q 044031 232 TPPLHCIGPLIVDAKDRAGGVSDDVSSDCLTWLDSQPSGSVVFLCFGSRGTFSAPQLKEIAIGLERSNQRFLWVVRNPSN 311 (468)
Q Consensus 232 ~p~~~~VGpl~~~~~~~~~~~~~~~~~~l~~~l~~~~~~~~v~vs~GS~~~~~~~~~~~~~~al~~~~~~~l~~~~~~~~ 311 (468)
|++++|||++....... +..+.+|.+||+.++++++|||+|||+...+.+++.+++.+|+.++++|||+++..
T Consensus 240 -~~v~~vGPl~~~~~~~~----~~~~~~~~~wLd~~~~~~vVyvsfGS~~~~~~~~~~el~~~l~~~~~~flw~~~~~-- 312 (454)
T 3hbf_A 240 -KLLLNVGPFNLTTPQRK----VSDEHGCLEWLDQHENSSVVYISFGSVVTPPPHELTALAESLEECGFPFIWSFRGD-- 312 (454)
T ss_dssp -SCEEECCCHHHHSCCSC----CCCTTCHHHHHHTSCTTCEEEEECCSSCCCCHHHHHHHHHHHHHHCCCEEEECCSC--
T ss_pred -CCEEEECCccccccccc----ccchHHHHHHHhcCCCCceEEEecCCCCcCCHHHHHHHHHHHHhCCCeEEEEeCCc--
Confidence 89999999986543111 11467899999998888999999999998899999999999999999999999875
Q ss_pred ccccCCChhHHhhccCCCeEecCCCCHHhhhCccCcceEEecCCcchHHHHHHhCCcEEecccccchhhHHHHHHhhcce
Q 044031 312 AAEAELPEGFLERTKERGLVVKSWAPQSTILGHESVGGFVTHCGWSSVVEAVTYGVPMIAWPLYAEQFLNSVALVQEMKV 391 (468)
Q Consensus 312 ~~~~~~~~~~~~~~~~~~~~v~~~~pq~~il~~~~~~~~ithgG~~s~~eal~~GvP~v~~P~~~DQ~~na~~~~~~~g~ 391 (468)
....+|++|.++..+++.++ +|+||.++|+|+++++|||||||||++|++++|||+|+||+++||+.||+++++.||+
T Consensus 313 -~~~~lp~~~~~~~~~~~~vv-~w~Pq~~vL~h~~v~~fvtH~G~~S~~Eal~~GvP~i~~P~~~DQ~~Na~~v~~~~g~ 390 (454)
T 3hbf_A 313 -PKEKLPKGFLERTKTKGKIV-AWAPQVEILKHSSVGVFLTHSGWNSVLECIVGGVPMISRPFFGDQGLNTILTESVLEI 390 (454)
T ss_dssp -HHHHSCTTHHHHTTTTEEEE-SSCCHHHHHHSTTEEEEEECCCHHHHHHHHHHTCCEEECCCSTTHHHHHHHHHTTSCS
T ss_pred -chhcCCHhHHhhcCCceEEE-eeCCHHHHHhhcCcCeEEecCCcchHHHHHHcCCCEecCcccccHHHHHHHHHHhhCe
Confidence 23458889988776544445 9999999999999999999999999999999999999999999999999999876899
Q ss_pred eeeeccCCcccccCCCCccccHHHHHHHHHHHhcCchhHHHHHHHHHHHHHHHHhhcCCCCCChHHHHHHHHHHhh
Q 044031 392 AMPMFLNGEEETIGNGEGVVSAERVEERVRELMMGSEGKALRERSLEMRMMAATAWNNNDGGSSFTAFSNLFDLWQ 467 (468)
Q Consensus 392 g~~~~~~~~~~~~~~~~~~~~~~~l~~av~~~l~~~~~~~~~~~a~~l~~~~~~a~~~~~~g~~~~~~~~~~~~~~ 467 (468)
|+.++. .. +++++|+++|+++|+|+++++||+||+++++.+++++. +||||++|+++||++|.
T Consensus 391 Gv~l~~--------~~---~~~~~l~~av~~ll~~~~~~~~r~~a~~l~~~~~~a~~--~gGsS~~~l~~~v~~i~ 453 (454)
T 3hbf_A 391 GVGVDN--------GV---LTKESIKKALELTMSSEKGGIMRQKIVKLKESAFKAVE--QNGTSAMDFTTLIQIVT 453 (454)
T ss_dssp EEECGG--------GS---CCHHHHHHHHHHHHSSHHHHHHHHHHHHHHHHHHHHTS--TTSHHHHHHHHHHHHHT
T ss_pred eEEecC--------CC---CCHHHHHHHHHHHHCCChHHHHHHHHHHHHHHHHHhhc--cCCCHHHHHHHHHHHHh
Confidence 999973 34 89999999999999987788999999999999999999 99999999999999986
No 2
>2vch_A Hydroquinone glucosyltransferase; glycosyltransferase, N-glucosyltransferase, UDP-glucose- dependent, plant glycosyltransferase; HET: UDP; 1.45A {Arabidopsis thaliana} SCOP: c.87.1.10 PDB: 2vce_A* 2vg8_A*
Probab=100.00 E-value=3.8e-67 Score=529.67 Aligned_cols=441 Identities=34% Similarity=0.639 Sum_probs=344.8
Q ss_pred ceEEEecCCCccCHHHHHHHHHHHHhC-CCCcEEEEEeCCCCCCchhhhhhhhccccCCCCCeeEEEcCCCCCCCCCC--
Q 044031 3 KTIALYPGPAFHHMISMVELGKLILQH-RSDVSITILVPSMPLEESKTCSYINSISHRLNPIISFYYLPAIQMPSETL-- 79 (468)
Q Consensus 3 ~~Iv~~~~~~~GHv~P~l~LA~~L~~~-G~~h~Vt~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~i~~~~lp~~~~-- 79 (468)
+||+++|+|++||++|+++||++|++| | |+|||+++....... .+.........+++|+.++...+++...
T Consensus 7 ~~vl~~p~p~~GHv~P~l~La~~L~~r~G--h~Vt~~t~~~~~~~~----~~~~~~~~~~~~i~~~~l~~~~~~~~~~~~ 80 (480)
T 2vch_A 7 PHVAIIPSPGMGHLIPLVEFAKRLVHLHG--LTVTFVIAGEGPPSK----AQRTVLDSLPSSISSVFLPPVDLTDLSSST 80 (480)
T ss_dssp CEEEEECCSCHHHHHHHHHHHHHHHHHHC--CEEEEEECCSSSCC-----CHHHHHC-CCTTEEEEECCCCCCTTSCTTC
T ss_pred cEEEEecCcchhHHHHHHHHHHHHHhCCC--CEEEEEECCCcchhh----hhhhhccccCCCceEEEcCCCCCCCCCCch
Confidence 699999999999999999999999998 9 999999876532111 1111100013589999998763332111
Q ss_pred ChhHHHHHHHHHhhHHHHHHHHhhhcCCCc-cEEEe----cCcHHHhhhCCCCeEEEecchhHHHHHHHhhhhhhhcccC
Q 044031 80 SRADIAIESIKLNSSNVFQALENISLTSKI-LSFII----TSTTSFSYHPNIPTYTYFNSCASTLAAILYLPTLHNQITS 154 (468)
Q Consensus 80 ~~~~~~~~~~~~~~~~l~~ll~~~~~~~~p-D~vI~----~~~~~vA~~lgIP~i~~~~~~~~~~~~~~~~p~~~~~~~~ 154 (468)
.....+........+.++++++++....++ ||||+ .|+..+|+++|||++.+++++++.++.++++|.+......
T Consensus 81 ~~~~~~~~~~~~~~~~l~~ll~~~~~~~~~pd~vI~D~~~~~~~~vA~~lgiP~v~~~~~~~~~~~~~~~~~~~~~~~~~ 160 (480)
T 2vch_A 81 RIESRISLTVTRSNPELRKVFDSFVEGGRLPTALVVDLFGTDAFDVAVEFHVPPYIFYPTTANVLSFFLHLPKLDETVSC 160 (480)
T ss_dssp CHHHHHHHHHHTTHHHHHHHHHHHHHTTCCCSEEEECTTCGGGHHHHHHTTCCEEEEECSCHHHHHHHHHHHHHHHHCCS
T ss_pred hHHHHHHHHHHhhhHHHHHHHHHhccCCCCCeEEEECCcchhHHHHHHHcCCCEEEEECccHHHHHHHHHHHHHHhcCCC
Confidence 111113344455667788888876433477 99999 7889999999999999999999988888887766543322
Q ss_pred CCCCCCCccccCCCCCCCCCCCCCccccCCCchhHHHHHHHhhhhcccceEEecChhhhhHHHHHHHHcCcccCCCCCCC
Q 044031 155 SFKDHPSSLLFIPGLPPVKSSFMPEPVLDRQKPIYDFFLNYSTSLSKSNGIIINTFDFLEQQAIKAIVNGDCVTNGTTPP 234 (468)
Q Consensus 155 ~~~~~~~~~~~~pg~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~s~~~le~~~~~~~~~~~~~~~~~~p~ 234 (468)
++.+. .....+||+++++..+++..+.++....+..+.+....+.+..++++||++++|..++..+.+ +++++++
T Consensus 161 ~~~~~-~~~~~~Pg~~p~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~nt~~ele~~~~~~l~~----~~~~~~~ 235 (480)
T 2vch_A 161 EFREL-TEPLMLPGCVPVAGKDFLDPAQDRKDDAYKWLLHNTKRYKEAEGILVNTFFELEPNAIKALQE----PGLDKPP 235 (480)
T ss_dssp CGGGC-SSCBCCTTCCCBCGGGSCGGGSCTTSHHHHHHHHHHHHGGGCSEEEESCCTTTSHHHHHHHHS----CCTTCCC
T ss_pred ccccc-CCcccCCCCCCCChHHCchhhhcCCchHHHHHHHHHHhcccCCEEEEcCHHHHhHHHHHHHHh----cccCCCc
Confidence 22211 123457888888888888776655444555556666677788899999999999998888876 1212478
Q ss_pred eeEecccccCCcCCCCCCCCCCcchhHHhhcCCCCCceEEeccCCCcCCCHHHHHHHHHHHHhCCCcEEEEEeCCC-C--
Q 044031 235 LHCIGPLIVDAKDRAGGVSDDVSSDCLTWLDSQPSGSVVFLCFGSRGTFSAPQLKEIAIGLERSNQRFLWVVRNPS-N-- 311 (468)
Q Consensus 235 ~~~VGpl~~~~~~~~~~~~~~~~~~l~~~l~~~~~~~~v~vs~GS~~~~~~~~~~~~~~al~~~~~~~l~~~~~~~-~-- 311 (468)
+++|||++....... .+..+.+|.+||+.++++++|||||||+...+.+++.+++++|+.++++|||+++... +
T Consensus 236 v~~vGpl~~~~~~~~---~~~~~~~~~~wLd~~~~~~vvyvs~GS~~~~~~~~~~~~~~al~~~~~~~lw~~~~~~~~~~ 312 (480)
T 2vch_A 236 VYPVGPLVNIGKQEA---KQTEESECLKWLDNQPLGSVLYVSFGSGGTLTCEQLNELALGLADSEQRFLWVIRSPSGIAN 312 (480)
T ss_dssp EEECCCCCCCSCSCC--------CHHHHHHHTSCTTCEEEEECTTTCCCCHHHHHHHHHHHHHTTCEEEEEECCCCSSTT
T ss_pred EEEEecccccccccc---CccchhHHHHHhcCCCCCceEEEecccccCCCHHHHHHHHHHHHhcCCcEEEEECCcccccc
Confidence 999999986542100 0115678999999988888999999999988899999999999999999999998752 1
Q ss_pred ---------cc-ccCCChhHHhhccCCCeEecCCCCHHhhhCccCcceEEecCCcchHHHHHHhCCcEEecccccchhhH
Q 044031 312 ---------AA-EAELPEGFLERTKERGLVVKSWAPQSTILGHESVGGFVTHCGWSSVVEAVTYGVPMIAWPLYAEQFLN 381 (468)
Q Consensus 312 ---------~~-~~~~~~~~~~~~~~~~~~v~~~~pq~~il~~~~~~~~ithgG~~s~~eal~~GvP~v~~P~~~DQ~~n 381 (468)
.. ...+|++|.+++++.|+++.+|+||.+||+|+++++|||||||||++||+++|||+|+||+++||+.|
T Consensus 313 ~~~~~~~~~~~~~~~lp~~~~~~~~~~g~~v~~w~Pq~~vL~h~~v~~fvtHgG~~S~~Eal~~GvP~i~~P~~~DQ~~n 392 (480)
T 2vch_A 313 SSYFDSHSQTDPLTFLPPGFLERTKKRGFVIPFWAPQAQVLAHPSTGGFLTHCGWNSTLESVVSGIPLIAWPLYAEQKMN 392 (480)
T ss_dssp TTTTCC--CSCGGGGSCTTHHHHTTTTEEEEESCCCHHHHHHSTTEEEEEECCCHHHHHHHHHHTCCEEECCCSTTHHHH
T ss_pred ccccccccccchhhhcCHHHHHHhCCCeEEEeCccCHHHHhCCCCcCeEEecccchhHHHHHHcCCCEEeccccccchHH
Confidence 11 23589999999988899997799999999999999999999999999999999999999999999999
Q ss_pred HHHHHhhcceeeeeccCCcccccCCCCccccHHHHHHHHHHHhcCchhHHHHHHHHHHHHHHHHhhcCCCCCChHHHHHH
Q 044031 382 SVALVQEMKVAMPMFLNGEEETIGNGEGVVSAERVEERVRELMMGSEGKALRERSLEMRMMAATAWNNNDGGSSFTAFSN 461 (468)
Q Consensus 382 a~~~~~~~g~g~~~~~~~~~~~~~~~~~~~~~~~l~~av~~~l~~~~~~~~~~~a~~l~~~~~~a~~~~~~g~~~~~~~~ 461 (468)
|+++++++|+|+.+.. .+++.+++++|+++|+++|++++.++||+||+++++++++|+. +||+|..++++
T Consensus 393 a~~l~~~~G~g~~l~~--------~~~~~~~~~~l~~av~~vl~~~~~~~~r~~a~~l~~~~~~a~~--~gGss~~~~~~ 462 (480)
T 2vch_A 393 AVLLSEDIRAALRPRA--------GDDGLVRREEVARVVKGLMEGEEGKGVRNKMKELKEAACRVLK--DDGTSTKALSL 462 (480)
T ss_dssp HHHHHHTTCCEECCCC--------CTTSCCCHHHHHHHHHHHHTSTHHHHHHHHHHHHHHHHHHHTS--TTSHHHHHHHH
T ss_pred HHHHHHHhCeEEEeec--------ccCCccCHHHHHHHHHHHhcCcchHHHHHHHHHHHHHHHHHHh--cCCCHHHHHHH
Confidence 9998667899999974 3223499999999999999865566999999999999999999 99999999999
Q ss_pred HHHHhh
Q 044031 462 LFDLWQ 467 (468)
Q Consensus 462 ~~~~~~ 467 (468)
||++++
T Consensus 463 ~v~~~~ 468 (480)
T 2vch_A 463 VALKWK 468 (480)
T ss_dssp HHHHHH
T ss_pred HHHHHH
Confidence 999875
No 3
>2acv_A Triterpene UDP-glucosyl transferase UGT71G1; glycosyltransferase; HET: UDP; 2.00A {Medicago truncatula} SCOP: c.87.1.10 PDB: 2acw_A*
Probab=100.00 E-value=4.9e-64 Score=505.06 Aligned_cols=433 Identities=34% Similarity=0.605 Sum_probs=336.2
Q ss_pred ceEEEecCCCccCHHHHHHHHHHHHhC--CCCcEEEEEeCCCCCCchhhhhhhhccccCCCCCeeEEEcCCCCCCCCC--
Q 044031 3 KTIALYPGPAFHHMISMVELGKLILQH--RSDVSITILVPSMPLEESKTCSYINSISHRLNPIISFYYLPAIQMPSET-- 78 (468)
Q Consensus 3 ~~Iv~~~~~~~GHv~P~l~LA~~L~~~--G~~h~Vt~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~i~~~~lp~~~-- 78 (468)
+||+++|+|++||++|+++||++|+++ | |+|||+++...... .+.+.+.+... ..++++|..+++..+++..
T Consensus 10 ~~vv~~p~p~~GHi~P~l~La~~L~~r~pG--~~Vt~v~t~~~~~~-~~~~~~~~~~~-~~~~i~~~~lp~~~~~~~~~~ 85 (463)
T 2acv_A 10 SELIFIPAPGIGHLASALEFAKLLTNHDKN--LYITVFCIKFPGMP-FADSYIKSVLA-SQPQIQLIDLPEVEPPPQELL 85 (463)
T ss_dssp EEEEEECCSSTTTHHHHHHHHHHHHHTCTT--EEEEEEECCCTTCC-CCHHHHHHHHC-SCTTEEEEECCCCCCCCGGGG
T ss_pred CEEEEEcCcccchHHHHHHHHHHHHhcCCC--cEEEEEEcCCcchh-hhhhhhhhccc-CCCCceEEECCCCCCCccccc
Confidence 599999999999999999999999999 9 99999988765321 12222222111 3358999999976444321
Q ss_pred CChhHHHHHHHHHhhHHHHHHHHhhhcCCCccEEEe----cCcHHHhhhCCCCeEEEecchhHHHHHHHhhhhhhhcccC
Q 044031 79 LSRADIAIESIKLNSSNVFQALENISLTSKILSFII----TSTTSFSYHPNIPTYTYFNSCASTLAAILYLPTLHNQITS 154 (468)
Q Consensus 79 ~~~~~~~~~~~~~~~~~l~~ll~~~~~~~~pD~vI~----~~~~~vA~~lgIP~i~~~~~~~~~~~~~~~~p~~~~~~~~ 154 (468)
......+...+....+.++++++++ ...++||||+ .|+..+|+++|||++.+++++++.++.+++++.+... .
T Consensus 86 ~~~~~~~~~~~~~~~~~~~~ll~~~-~~~~~d~vI~D~~~~~~~~vA~~lgiP~v~~~~~~~~~~~~~~~~~~~~~~--~ 162 (463)
T 2acv_A 86 KSPEFYILTFLESLIPHVKATIKTI-LSNKVVGLVLDFFCVSMIDVGNEFGIPSYLFLTSNVGFLSLMLSLKNRQIE--E 162 (463)
T ss_dssp GSHHHHHHHHHHHTHHHHHHHHHHH-CCTTEEEEEEEGGGGGGHHHHHHTTCCEEEEESSCHHHHHHHHHGGGSCTT--C
T ss_pred CCccHHHHHHHHhhhHHHHHHHHhc-cCCCCeEEEECCcchhHHHHHHHcCCCEEEEeCchHHHHHHHHHHHhhccc--C
Confidence 1111123444556677888888875 3358999999 7899999999999999999999988888777765411 1
Q ss_pred CCCCCCCc---cccCCCC-CCCCCCCCCccccCCCchhHHHHHHHhhhhcccceEEecChhhhhHHHHHHHHcCcccCCC
Q 044031 155 SFKDHPSS---LLFIPGL-PPVKSSFMPEPVLDRQKPIYDFFLNYSTSLSKSNGIIINTFDFLEQQAIKAIVNGDCVTNG 230 (468)
Q Consensus 155 ~~~~~~~~---~~~~pg~-~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~s~~~le~~~~~~~~~~~~~~~~ 230 (468)
++.. ... ...+||+ ++++.++++..+.++ ...+..+.+......+.+++++||+++||++.+..+.+... |
T Consensus 163 ~~~~-~~~~~~~~~~pg~~~~~~~~~l~~~~~~~-~~~~~~~~~~~~~~~~~~~~l~nt~~ele~~~~~~l~~~~~-p-- 237 (463)
T 2acv_A 163 VFDD-SDRDHQLLNIPGISNQVPSNVLPDACFNK-DGGYIAYYKLAERFRDTKGIIVNTFSDLEQSSIDALYDHDE-K-- 237 (463)
T ss_dssp CCCC-SSGGGCEECCTTCSSCEEGGGSCHHHHCT-TTHHHHHHHHHHHHTTSSEEEESCCHHHHHHHHHHHHHHCT-T--
T ss_pred CCCC-ccccCceeECCCCCCCCChHHCchhhcCC-chHHHHHHHHHHhcccCCEEEECCHHHHhHHHHHHHHhccc-c--
Confidence 1211 111 3457888 777777777666555 34556666666777888899999999999999888776431 1
Q ss_pred CCCCeeEecccccCCc-CCCCCCCCCCcchhHHhhcCCCCCceEEeccCCCc-CCCHHHHHHHHHHHHhCCCcEEEEEeC
Q 044031 231 TTPPLHCIGPLIVDAK-DRAGGVSDDVSSDCLTWLDSQPSGSVVFLCFGSRG-TFSAPQLKEIAIGLERSNQRFLWVVRN 308 (468)
Q Consensus 231 ~~p~~~~VGpl~~~~~-~~~~~~~~~~~~~l~~~l~~~~~~~~v~vs~GS~~-~~~~~~~~~~~~al~~~~~~~l~~~~~ 308 (468)
.+++++|||++.... ..... +|..+.+|.+||+.++++++|||+|||+. ..+.+++.+++++|+..+++|||+++.
T Consensus 238 -~~~v~~vGpl~~~~~~~~~~~-~~~~~~~~~~wl~~~~~~~vv~vs~GS~~~~~~~~~~~~~~~~l~~~~~~~l~~~~~ 315 (463)
T 2acv_A 238 -IPPIYAVGPLLDLKGQPNPKL-DQAQHDLILKWLDEQPDKSVVFLCFGSMGVSFGPSQIREIALGLKHSGVRFLWSNSA 315 (463)
T ss_dssp -SCCEEECCCCCCSSCCCBTTB-CHHHHHHHHHHHHTSCTTCEEEEECCSSCCCCCHHHHHHHHHHHHHHTCEEEEECCC
T ss_pred -CCcEEEeCCCccccccccccc-ccccchhHHHHHhcCCCCceEEEEeccccccCCHHHHHHHHHHHHhCCCcEEEEECC
Confidence 378999999986431 10000 01135689999999888899999999999 888888999999999999999999986
Q ss_pred CCCccccCCChhHHhhc--cCCCeEecCCCCHHhhhCccCcceEEecCCcchHHHHHHhCCcEEecccccchhhHHHHHH
Q 044031 309 PSNAAEAELPEGFLERT--KERGLVVKSWAPQSTILGHESVGGFVTHCGWSSVVEAVTYGVPMIAWPLYAEQFLNSVALV 386 (468)
Q Consensus 309 ~~~~~~~~~~~~~~~~~--~~~~~~v~~~~pq~~il~~~~~~~~ithgG~~s~~eal~~GvP~v~~P~~~DQ~~na~~~~ 386 (468)
+ .+.+|++|.++. .+ ++.+.+|+||.++|+|+++++|||||||||++|++++|||+|++|+++||+.||++++
T Consensus 316 ~----~~~l~~~~~~~~~~~~-~~~v~~w~pq~~vL~h~~~~~fvth~G~~s~~Eal~~GvP~i~~P~~~dQ~~Na~~lv 390 (463)
T 2acv_A 316 E----KKVFPEGFLEWMELEG-KGMICGWAPQVEVLAHKAIGGFVSHCGWNSILESMWFGVPILTWPIYAEQQLNAFRLV 390 (463)
T ss_dssp C----GGGSCTTHHHHHHHHC-SEEEESSCCHHHHHHSTTEEEEEECCCHHHHHHHHHTTCCEEECCCSTTHHHHHHHHH
T ss_pred C----cccCChhHHHhhccCC-CEEEEccCCHHHHhCCCccCeEEecCCchhHHHHHHcCCCeeeccchhhhHHHHHHHH
Confidence 3 124778887765 44 4555589999999999999999999999999999999999999999999999999964
Q ss_pred hhcceeeee-ccCCcccccCCCCc--cccHHHHHHHHHHHhc-CchhHHHHHHHHHHHHHHHHhhcCCCCCChHHHHHHH
Q 044031 387 QEMKVAMPM-FLNGEEETIGNGEG--VVSAERVEERVRELMM-GSEGKALRERSLEMRMMAATAWNNNDGGSSFTAFSNL 462 (468)
Q Consensus 387 ~~~g~g~~~-~~~~~~~~~~~~~~--~~~~~~l~~av~~~l~-~~~~~~~~~~a~~l~~~~~~a~~~~~~g~~~~~~~~~ 462 (468)
+++|+|+.+ +. .+++ .+++++|.++|+++|+ ++ +||+||+++++.+++|+. +||||++++++|
T Consensus 391 ~~~g~g~~l~~~--------~~~~~~~~~~~~l~~ai~~ll~~~~---~~r~~a~~l~~~~~~a~~--~gGss~~~l~~~ 457 (463)
T 2acv_A 391 KEWGVGLGLRVD--------YRKGSDVVAAEEIEKGLKDLMDKDS---IVHKKVQEMKEMSRNAVV--DGGSSLISVGKL 457 (463)
T ss_dssp HTSCCEEESCSS--------CCTTCCCCCHHHHHHHHHHHTCTTC---THHHHHHHHHHHHHHHTS--TTSHHHHHHHHH
T ss_pred HHcCeEEEEecc--------cCCCCccccHHHHHHHHHHHHhccH---HHHHHHHHHHHHHHHHHh--cCCcHHHHHHHH
Confidence 577999999 31 1112 4899999999999997 46 899999999999999999 999999999999
Q ss_pred HHHhh
Q 044031 463 FDLWQ 467 (468)
Q Consensus 463 ~~~~~ 467 (468)
|++++
T Consensus 458 v~~~~ 462 (463)
T 2acv_A 458 IDDIT 462 (463)
T ss_dssp HHHHH
T ss_pred HHHhc
Confidence 99986
No 4
>2pq6_A UDP-glucuronosyl/UDP-glucosyltransferase; glycosylation, isoflavonoid, uridine diphosphate glycosyltransferase; 2.10A {Medicago truncatula} SCOP: c.87.1.10
Probab=100.00 E-value=5.1e-64 Score=508.50 Aligned_cols=438 Identities=24% Similarity=0.431 Sum_probs=328.3
Q ss_pred ceEEEecCCCccCHHHHHHHHHHHHhCCCCcEEEEEeCCCCCCchhhhhhhhccccCCCCCeeEEEcCCCCCCCCC---C
Q 044031 3 KTIALYPGPAFHHMISMVELGKLILQHRSDVSITILVPSMPLEESKTCSYINSISHRLNPIISFYYLPAIQMPSET---L 79 (468)
Q Consensus 3 ~~Iv~~~~~~~GHv~P~l~LA~~L~~~G~~h~Vt~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~i~~~~lp~~~---~ 79 (468)
+||+++|+|++||++|++.||++|++|| |+|||+++..... .+.+..........++++|+.+++. +|+.. .
T Consensus 9 ~~vl~~p~p~~GHi~P~l~La~~L~~rG--~~VT~v~t~~~~~--~~~~~~~~~~~~~~~~i~~~~l~~~-lp~~~~~~~ 83 (482)
T 2pq6_A 9 PHVVMIPYPVQGHINPLFKLAKLLHLRG--FHITFVNTEYNHK--RLLKSRGPKAFDGFTDFNFESIPDG-LTPMEGDGD 83 (482)
T ss_dssp CEEEEECCSSHHHHHHHHHHHHHHHHTT--CEEEEEEEHHHHH--HHC------------CEEEEEECCC-CC-------
T ss_pred CEEEEecCccchhHHHHHHHHHHHHhCC--CeEEEEeCCchhh--hhccccccccccCCCceEEEECCCC-CCCcccccC
Confidence 6999999999999999999999999999 9999997654221 1111100000001248999999865 65521 1
Q ss_pred ---ChhHHHHHHHHHhhHHHHHHHHhhhc---CCCccEEEe----cCcHHHhhhCCCCeEEEecchhHHHHHHHhhhhhh
Q 044031 80 ---SRADIAIESIKLNSSNVFQALENISL---TSKILSFII----TSTTSFSYHPNIPTYTYFNSCASTLAAILYLPTLH 149 (468)
Q Consensus 80 ---~~~~~~~~~~~~~~~~l~~ll~~~~~---~~~pD~vI~----~~~~~vA~~lgIP~i~~~~~~~~~~~~~~~~p~~~ 149 (468)
....++..+...+.+.++++++.+.. ..++||||+ .|+..+|+++|||++.+++++++....+++++...
T Consensus 84 ~~~~~~~~~~~~~~~~~~~l~~ll~~l~~~~~~~~~d~vI~D~~~~~~~~vA~~lgiP~v~~~~~~~~~~~~~~~~~~~~ 163 (482)
T 2pq6_A 84 VSQDVPTLCQSVRKNFLKPYCELLTRLNHSTNVPPVTCLVSDCCMSFTIQAAEEFELPNVLYFSSSACSLLNVMHFRSFV 163 (482)
T ss_dssp --CCHHHHHHHHTTSSHHHHHHHHHHHHTCSSSCCCCEEEEETTCTHHHHHHHHTTCCEEEEECSCHHHHHHHTTHHHHH
T ss_pred cchhHHHHHHHHHHHhhHHHHHHHHHHhhhccCCCceEEEECCcchhHHHHHHHcCCCEEEEecccHHHHHHHHHHHHHH
Confidence 11111222223456677888887653 258999999 78889999999999999999998877766565443
Q ss_pred hcccCCCCCC----C---Cc-cccCCCCCCCCCCCCCccccCC--CchhHHHHHHHhhhhcccceEEecChhhhhHHHHH
Q 044031 150 NQITSSFKDH----P---SS-LLFIPGLPPVKSSFMPEPVLDR--QKPIYDFFLNYSTSLSKSNGIIINTFDFLEQQAIK 219 (468)
Q Consensus 150 ~~~~~~~~~~----~---~~-~~~~pg~~~~~~~~l~~~~~~~--~~~~~~~~~~~~~~~~~~~~~l~~s~~~le~~~~~ 219 (468)
.....+.... . .. ...+||++.++..+++..+... .....+.+.+......+.+++++||+++||+++++
T Consensus 164 ~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~vl~nt~~~le~~~~~ 243 (482)
T 2pq6_A 164 ERGIIPFKDESYLTNGCLETKVDWIPGLKNFRLKDIVDFIRTTNPNDIMLEFFIEVADRVNKDTTILLNTFNELESDVIN 243 (482)
T ss_dssp HTTCSSCSSGGGGTSSGGGCBCCSSTTCCSCBGGGSCGGGCCSCTTCHHHHHHHHHHHTCCTTCCEEESSCGGGGHHHHH
T ss_pred hcCCCCCccccccccccccCccccCCCCCCCchHHCchhhccCCcccHHHHHHHHHHHhhccCCEEEEcChHHHhHHHHH
Confidence 3222222110 0 11 1236787777777777665432 23444444455666778899999999999999988
Q ss_pred HHHcCcccCCCCCCCeeEecccccC-CcCC------CCCCC-CCCcchhHHhhcCCCCCceEEeccCCCcCCCHHHHHHH
Q 044031 220 AIVNGDCVTNGTTPPLHCIGPLIVD-AKDR------AGGVS-DDVSSDCLTWLDSQPSGSVVFLCFGSRGTFSAPQLKEI 291 (468)
Q Consensus 220 ~~~~~~~~~~~~~p~~~~VGpl~~~-~~~~------~~~~~-~~~~~~l~~~l~~~~~~~~v~vs~GS~~~~~~~~~~~~ 291 (468)
.+++.. +++++|||++.. +... ..... |..+.+|.+||+.++++++|||||||+...+.+++.++
T Consensus 244 ~~~~~~-------~~v~~VGPl~~~~~~~~~~~~~~~~~~~l~~~~~~~~~wld~~~~~~vv~vs~GS~~~~~~~~~~~~ 316 (482)
T 2pq6_A 244 ALSSTI-------PSIYPIGPLPSLLKQTPQIHQLDSLDSNLWKEDTECLDWLESKEPGSVVYVNFGSTTVMTPEQLLEF 316 (482)
T ss_dssp HHHTTC-------TTEEECCCHHHHHHTSTTGGGGCC---------CHHHHHHTTSCTTCEEEEECCSSSCCCHHHHHHH
T ss_pred HHHHhC-------CcEEEEcCCcccccccccccccccccccccccchHHHHHHhcCCCCceEEEecCCcccCCHHHHHHH
Confidence 887654 789999999863 2110 00001 22455799999998888899999999988888899999
Q ss_pred HHHHHhCCCcEEEEEeCCC-CccccCCChhHHhhccCCCeEecCCCCHHhhhCccCcceEEecCCcchHHHHHHhCCcEE
Q 044031 292 AIGLERSNQRFLWVVRNPS-NAAEAELPEGFLERTKERGLVVKSWAPQSTILGHESVGGFVTHCGWSSVVEAVTYGVPMI 370 (468)
Q Consensus 292 ~~al~~~~~~~l~~~~~~~-~~~~~~~~~~~~~~~~~~~~~v~~~~pq~~il~~~~~~~~ithgG~~s~~eal~~GvP~v 370 (468)
+++|+..+++|||+++... .+....+|+++.++.. .|+.+.+|+||.++|+|+++++|||||||||++|++++|||+|
T Consensus 317 ~~~l~~~~~~~l~~~~~~~~~~~~~~l~~~~~~~~~-~~~~v~~~~pq~~~L~h~~~~~~vth~G~~s~~Eal~~GvP~i 395 (482)
T 2pq6_A 317 AWGLANCKKSFLWIIRPDLVIGGSVIFSSEFTNEIA-DRGLIASWCPQDKVLNHPSIGGFLTHCGWNSTTESICAGVPML 395 (482)
T ss_dssp HHHHHHTTCEEEEECCGGGSTTTGGGSCHHHHHHHT-TTEEEESCCCHHHHHTSTTEEEEEECCCHHHHHHHHHHTCCEE
T ss_pred HHHHHhcCCcEEEEEcCCccccccccCcHhHHHhcC-CCEEEEeecCHHHHhcCCCCCEEEecCCcchHHHHHHcCCCEE
Confidence 9999999999999998641 1111237888877764 4666679999999999999999999999999999999999999
Q ss_pred ecccccchhhHHHHHHhhcceeeeeccCCcccccCCCCccccHHHHHHHHHHHhcCchhHHHHHHHHHHHHHHHHhhcCC
Q 044031 371 AWPLYAEQFLNSVALVQEMKVAMPMFLNGEEETIGNGEGVVSAERVEERVRELMMGSEGKALRERSLEMRMMAATAWNNN 450 (468)
Q Consensus 371 ~~P~~~DQ~~na~~~~~~~g~g~~~~~~~~~~~~~~~~~~~~~~~l~~av~~~l~~~~~~~~~~~a~~l~~~~~~a~~~~ 450 (468)
++|+++||+.||+++++++|+|+.++ .+ +++++|.++|+++|+|+++++||+||+++++.+++|+.
T Consensus 396 ~~P~~~dQ~~na~~~~~~~G~g~~l~---------~~---~~~~~l~~~i~~ll~~~~~~~~r~~a~~l~~~~~~a~~-- 461 (482)
T 2pq6_A 396 CWPFFADQPTDCRFICNEWEIGMEID---------TN---VKREELAKLINEVIAGDKGKKMKQKAMELKKKAEENTR-- 461 (482)
T ss_dssp ECCCSTTHHHHHHHHHHTSCCEEECC---------SS---CCHHHHHHHHHHHHTSHHHHHHHHHHHHHHHHHHHHTS--
T ss_pred ecCcccchHHHHHHHHHHhCEEEEEC---------CC---CCHHHHHHHHHHHHcCCcHHHHHHHHHHHHHHHHHHHh--
Confidence 99999999999999976679999997 24 89999999999999988777899999999999999999
Q ss_pred CCCChHHHHHHHHHHhh
Q 044031 451 DGGSSFTAFSNLFDLWQ 467 (468)
Q Consensus 451 ~~g~~~~~~~~~~~~~~ 467 (468)
+||||.+++++||++++
T Consensus 462 ~gGss~~~l~~~v~~~~ 478 (482)
T 2pq6_A 462 PGGCSYMNLNKVIKDVL 478 (482)
T ss_dssp TTCHHHHHHHHHHHHTT
T ss_pred cCCcHHHHHHHHHHHHH
Confidence 99999999999999875
No 5
>2c1x_A UDP-glucose flavonoid 3-O glycosyltransferase; WINE, catalysis, glycosylation; HET: UDP B3P; 1.9A {Vitis vinifera} SCOP: c.87.1.10 PDB: 2c1z_A* 2c9z_A*
Probab=100.00 E-value=9.7e-64 Score=501.59 Aligned_cols=431 Identities=23% Similarity=0.367 Sum_probs=325.7
Q ss_pred ceEEEecCCCccCHHHHHHHHHHHHhCCCCcEEEEEeCCCCCCchhhhhhhhccccCCCCCeeEEEcCCCCCCCCCC---
Q 044031 3 KTIALYPGPAFHHMISMVELGKLILQHRSDVSITILVPSMPLEESKTCSYINSISHRLNPIISFYYLPAIQMPSETL--- 79 (468)
Q Consensus 3 ~~Iv~~~~~~~GHv~P~l~LA~~L~~~G~~h~Vt~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~i~~~~lp~~~~--- 79 (468)
+||+++|+|++||++|+++||++|++||+++.|||+++..... ......... ..++++|+.++++ +|++.+
T Consensus 8 ~hvv~~p~p~~GHi~P~l~la~~L~~rGh~v~vt~~~t~~~~~-~~~~~~~~~----~~~~i~~~~i~~g-lp~~~~~~~ 81 (456)
T 2c1x_A 8 PHVAVLAFPFSTHAAPLLAVVRRLAAAAPHAVFSFFSTSQSNA-SIFHDSMHT----MQCNIKSYDISDG-VPEGYVFAG 81 (456)
T ss_dssp CEEEEECCCSSSSHHHHHHHHHHHHHHCTTSEEEEEECHHHHH-HHC-----------CTTEEEEECCCC-CCTTCCCCC
T ss_pred CEEEEEcCcccchHHHHHHHHHHHHhCCCCeEEEEEeCchhHH-Hhhcccccc----CCCceEEEeCCCC-CCCcccccC
Confidence 6999999999999999999999999997446678776532111 001000000 1248999999875 665431
Q ss_pred ChhHHHHHHHHHhhHHHHHHHHhhhc--CCCccEEEe----cCcHHHhhhCCCCeEEEecchhHHHHHHHhhhhhhhccc
Q 044031 80 SRADIAIESIKLNSSNVFQALENISL--TSKILSFII----TSTTSFSYHPNIPTYTYFNSCASTLAAILYLPTLHNQIT 153 (468)
Q Consensus 80 ~~~~~~~~~~~~~~~~l~~ll~~~~~--~~~pD~vI~----~~~~~vA~~lgIP~i~~~~~~~~~~~~~~~~p~~~~~~~ 153 (468)
.....+..+.......++++++++.+ ..++||||+ .|+..+|+++|||++.+++++++.+..+++.+.+.....
T Consensus 82 ~~~~~~~~~~~~~~~~~~~~l~~l~~~~~~~~d~vI~D~~~~~~~~vA~~lgiP~v~~~~~~~~~~~~~~~~~~~~~~~~ 161 (456)
T 2c1x_A 82 RPQEDIELFTRAAPESFRQGMVMAVAETGRPVSCLVADAFIWFAADMAAEMGVAWLPFWTAGPNSLSTHVYIDEIREKIG 161 (456)
T ss_dssp CTTHHHHHHHHHHHHHHHHHHHHHHHHHTCCCCEEEEETTSTTHHHHHHHHTCEEEEEECSCHHHHHHHHTHHHHHHHHC
T ss_pred ChHHHHHHHHHHhHHHHHHHHHHHHhccCCCceEEEECCchHhHHHHHHHhCCCEEEEeCccHHHHHHHhhhHHHHhccC
Confidence 11122222333334556666665442 258999999 788999999999999999999988877666655432211
Q ss_pred -CCC-CCCCCccccCCCCCCCCCCCCCccccCC--CchhHHHHHHHhhhhcccceEEecChhhhhHHHHHHHHcCcccCC
Q 044031 154 -SSF-KDHPSSLLFIPGLPPVKSSFMPEPVLDR--QKPIYDFFLNYSTSLSKSNGIIINTFDFLEQQAIKAIVNGDCVTN 229 (468)
Q Consensus 154 -~~~-~~~~~~~~~~pg~~~~~~~~l~~~~~~~--~~~~~~~~~~~~~~~~~~~~~l~~s~~~le~~~~~~~~~~~~~~~ 229 (468)
.+. .........+||+++++.++++..+... ...+...+.+......+++++++||+++||+++++.+++..
T Consensus 162 ~~~~~~~~~~~~~~~pg~~~~~~~~lp~~~~~~~~~~~~~~~~~~~~~~~~~~~~vl~ns~~~le~~~~~~~~~~~---- 237 (456)
T 2c1x_A 162 VSGIQGREDELLNFIPGMSKVRFRDLQEGIVFGNLNSLFSRMLHRMGQVLPKATAVFINSFEELDDSLTNDLKSKL---- 237 (456)
T ss_dssp SSCCTTCTTCBCTTSTTCTTCBGGGSCTTTSSSCTTSHHHHHHHHHHHHGGGSSCEEESSCGGGCHHHHHHHHHHS----
T ss_pred CcccccccccccccCCCCCcccHHhCchhhcCCCcccHHHHHHHHHHHhhhhCCEEEECChHHHhHHHHHHHHhcC----
Confidence 111 1111222347898888777877654322 12233333344455677889999999999999888887664
Q ss_pred CCCCCeeEecccccCCcCCCCCCCCCCcchhHHhhcCCCCCceEEeccCCCcCCCHHHHHHHHHHHHhCCCcEEEEEeCC
Q 044031 230 GTTPPLHCIGPLIVDAKDRAGGVSDDVSSDCLTWLDSQPSGSVVFLCFGSRGTFSAPQLKEIAIGLERSNQRFLWVVRNP 309 (468)
Q Consensus 230 ~~~p~~~~VGpl~~~~~~~~~~~~~~~~~~l~~~l~~~~~~~~v~vs~GS~~~~~~~~~~~~~~al~~~~~~~l~~~~~~ 309 (468)
|++++|||++....... +..+.+|.+||+.++++++|||+|||+...+.+++.+++++|+..+++|||+++..
T Consensus 238 ---~~~~~vGpl~~~~~~~~----~~~~~~~~~wl~~~~~~~vv~vs~GS~~~~~~~~~~~~~~~l~~~~~~~lw~~~~~ 310 (456)
T 2c1x_A 238 ---KTYLNIGPFNLITPPPV----VPNTTGCLQWLKERKPTSVVYISFGTVTTPPPAEVVALSEALEASRVPFIWSLRDK 310 (456)
T ss_dssp ---SCEEECCCHHHHC-------------CHHHHHHTSCTTCEEEEECCSSCCCCHHHHHHHHHHHHHHTCCEEEECCGG
T ss_pred ---CCEEEecCcccCccccc----ccchhhHHHHHhcCCCcceEEEecCccccCCHHHHHHHHHHHHhcCCeEEEEECCc
Confidence 79999999986432111 11345799999998888899999999998888889999999999999999999864
Q ss_pred CCccccCCChhHHhhccCCCeEecCCCCHHhhhCccCcceEEecCCcchHHHHHHhCCcEEecccccchhhHHHHHHhhc
Q 044031 310 SNAAEAELPEGFLERTKERGLVVKSWAPQSTILGHESVGGFVTHCGWSSVVEAVTYGVPMIAWPLYAEQFLNSVALVQEM 389 (468)
Q Consensus 310 ~~~~~~~~~~~~~~~~~~~~~~v~~~~pq~~il~~~~~~~~ithgG~~s~~eal~~GvP~v~~P~~~DQ~~na~~~~~~~ 389 (468)
....+|++|.++.. .|+.+.+|+||.++|+|+++++|||||||||++|++++|||+|++|+++||+.||+++++.|
T Consensus 311 ---~~~~l~~~~~~~~~-~~~~v~~w~pq~~vL~h~~~~~fvth~G~~S~~Eal~~GvP~i~~P~~~dQ~~Na~~l~~~~ 386 (456)
T 2c1x_A 311 ---ARVHLPEGFLEKTR-GYGMVVPWAPQAEVLAHEAVGAFVTHCGWNSLWESVAGGVPLICRPFFGDQRLNGRMVEDVL 386 (456)
T ss_dssp ---GGGGSCTTHHHHHT-TTEEEESCCCHHHHHTSTTEEEEEECCCHHHHHHHHHHTCCEEECCCSTTHHHHHHHHHHTS
T ss_pred ---chhhCCHHHHhhcC-CceEEecCCCHHHHhcCCcCCEEEecCCcchHHHHHHhCceEEecCChhhHHHHHHHHHHHh
Confidence 22357888877654 45666699999999999999999999999999999999999999999999999999998777
Q ss_pred ceeeeeccCCcccccCCCCccccHHHHHHHHHHHhcCchhHHHHHHHHHHHHHHHHhhcCCCCCChHHHHHHHHHHhh
Q 044031 390 KVAMPMFLNGEEETIGNGEGVVSAERVEERVRELMMGSEGKALRERSLEMRMMAATAWNNNDGGSSFTAFSNLFDLWQ 467 (468)
Q Consensus 390 g~g~~~~~~~~~~~~~~~~~~~~~~~l~~av~~~l~~~~~~~~~~~a~~l~~~~~~a~~~~~~g~~~~~~~~~~~~~~ 467 (468)
|+|+.+.. .+ +++++|+++|+++|+|+++++||+||+++++.+++++. +||||.+++++||++++
T Consensus 387 g~g~~l~~--------~~---~~~~~l~~~i~~ll~~~~~~~~r~~a~~l~~~~~~a~~--~gGsS~~~l~~~v~~~~ 451 (456)
T 2c1x_A 387 EIGVRIEG--------GV---FTKSGLMSCFDQILSQEKGKKLRENLRALRETADRAVG--PKGSSTENFITLVDLVS 451 (456)
T ss_dssp CCEEECGG--------GS---CCHHHHHHHHHHHHHSHHHHHHHHHHHHHHHHHHHHTS--TTCHHHHHHHHHHHHHT
T ss_pred CeEEEecC--------CC---cCHHHHHHHHHHHHCCCcHHHHHHHHHHHHHHHHHhhh--cCCcHHHHHHHHHHHHH
Confidence 99999973 35 89999999999999987778999999999999999999 99999999999999885
No 6
>2iya_A OLEI, oleandomycin glycosyltransferase; carbohydrate, glycosylation, enzyme, macrolide; HET: UDP ZIO; 1.7A {Streptomyces antibioticus}
Probab=100.00 E-value=7.6e-41 Score=334.48 Aligned_cols=366 Identities=16% Similarity=0.176 Sum_probs=238.8
Q ss_pred ceEEEecCCCccCHHHHHHHHHHHHhCCCCcEEEEEeCCCCCCchhhhhhhhccccCCCCCeeEEEcCCCCCCCCCC---
Q 044031 3 KTIALYPGPAFHHMISMVELGKLILQHRSDVSITILVPSMPLEESKTCSYINSISHRLNPIISFYYLPAIQMPSETL--- 79 (468)
Q Consensus 3 ~~Iv~~~~~~~GHv~P~l~LA~~L~~~G~~h~Vt~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~i~~~~lp~~~~--- 79 (468)
+||+++++|++||++|+++||++|+++| |+|+|+++.... ..+.. .+++|+.++.. ++.+..
T Consensus 13 ~~Il~~~~~~~GHv~p~l~la~~L~~~G--h~V~~~~~~~~~------~~~~~------~g~~~~~~~~~-~~~~~~~~~ 77 (424)
T 2iya_A 13 RHISFFNIPGHGHVNPSLGIVQELVARG--HRVSYAITDEFA------AQVKA------AGATPVVYDSI-LPKESNPEE 77 (424)
T ss_dssp CEEEEECCSCHHHHHHHHHHHHHHHHTT--CEEEEEECGGGH------HHHHH------HTCEEEECCCC-SCCTTCTTC
T ss_pred ceEEEEeCCCCcccchHHHHHHHHHHCC--CeEEEEeCHHHH------HHHHh------CCCEEEecCcc-ccccccchh
Confidence 5999999999999999999999999999 999999765421 12222 27888888765 443211
Q ss_pred ----ChhHHHHHH---HHHhhHHHHHHHHhhhcCCCccEEEe----cCcHHHhhhCCCCeEEEecchhHHHHHHHhhhhh
Q 044031 80 ----SRADIAIES---IKLNSSNVFQALENISLTSKILSFII----TSTTSFSYHPNIPTYTYFNSCASTLAAILYLPTL 148 (468)
Q Consensus 80 ----~~~~~~~~~---~~~~~~~l~~ll~~~~~~~~pD~vI~----~~~~~vA~~lgIP~i~~~~~~~~~~~~~~~~p~~ 148 (468)
.....+..+ .......+.+++ ++.+|||||+ .|+..+|+++|||++.++++++........++..
T Consensus 78 ~~~~~~~~~~~~~~~~~~~~~~~l~~~l----~~~~pD~VI~d~~~~~~~~~A~~lgIP~v~~~~~~~~~~~~~~~~~~~ 153 (424)
T 2iya_A 78 SWPEDQESAMGLFLDEAVRVLPQLEDAY----ADDRPDLIVYDIASWPAPVLGRKWDIPFVQLSPTFVAYEGFEEDVPAV 153 (424)
T ss_dssp CCCSSHHHHHHHHHHHHHHHHHHHHHHT----TTSCCSEEEEETTCTHHHHHHHHHTCCEEEEESSCCCCTTHHHHSGGG
T ss_pred hcchhHHHHHHHHHHHHHHHHHHHHHHH----hccCCCEEEEcCcccHHHHHHHhcCCCEEEEecccccccccccccccc
Confidence 111111111 112222333333 3349999999 5678899999999999987664211110000000
Q ss_pred hhcccCCCCCCCCccccCCCCCCCCCCCCCccccCC---Cchh---HHHHHHHh-------hhhcccceEEecChhhhhH
Q 044031 149 HNQITSSFKDHPSSLLFIPGLPPVKSSFMPEPVLDR---QKPI---YDFFLNYS-------TSLSKSNGIIINTFDFLEQ 215 (468)
Q Consensus 149 ~~~~~~~~~~~~~~~~~~pg~~~~~~~~l~~~~~~~---~~~~---~~~~~~~~-------~~~~~~~~~l~~s~~~le~ 215 (468)
. .++.+... +..++........ +... .... ...+.+.. ......+.+++++.+.+++
T Consensus 154 ~----~~~~~~~~-----~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~l~~~~~~l~~ 223 (424)
T 2iya_A 154 Q----DPTADRGE-----EAAAPAGTGDAEE-GAEAEDGLVRFFTRLSAFLEEHGVDTPATEFLIAPNRCIVALPRTFQI 223 (424)
T ss_dssp S----CCCC---------------------------HHHHHHHHHHHHHHHHHTTCCSCHHHHHHCCSSEEESSCTTTST
T ss_pred c----cccccccc-----ccccccccccchh-hhccchhHHHHHHHHHHHHHHcCCCCCHHHhccCCCcEEEEcchhhCC
Confidence 0 00000000 0000000000000 0000 0000 11111110 0111345678888887775
Q ss_pred HHHHHHHcCcccCCCCCCCeeEecccccCCcCCCCCCCCCCcchhHHhhcCCCCCceEEeccCCCcCCCHHHHHHHHHHH
Q 044031 216 QAIKAIVNGDCVTNGTTPPLHCIGPLIVDAKDRAGGVSDDVSSDCLTWLDSQPSGSVVFLCFGSRGTFSAPQLKEIAIGL 295 (468)
Q Consensus 216 ~~~~~~~~~~~~~~~~~p~~~~VGpl~~~~~~~~~~~~~~~~~~l~~~l~~~~~~~~v~vs~GS~~~~~~~~~~~~~~al 295 (468)
+. ..+ .+++++|||++.... +..+|++..+++++|||++||+.....+.+.+++++|
T Consensus 224 ~~-----~~~------~~~~~~vGp~~~~~~------------~~~~~~~~~~~~~~v~v~~Gs~~~~~~~~~~~~~~al 280 (424)
T 2iya_A 224 KG-----DTV------GDNYTFVGPTYGDRS------------HQGTWEGPGDGRPVLLIALGSAFTDHLDFYRTCLSAV 280 (424)
T ss_dssp TG-----GGC------CTTEEECCCCCCCCG------------GGCCCCCCCSSCCEEEEECCSSSCCCHHHHHHHHHHH
T ss_pred Cc-----cCC------CCCEEEeCCCCCCcc------------cCCCCCccCCCCCEEEEEcCCCCcchHHHHHHHHHHH
Confidence 32 111 267999999864321 1124766555667999999999866678888999999
Q ss_pred HhCCCcEEEEEeCCCCccccCCChhHHhhccCCCeEecCCCCHHhhhCccCcceEEecCCcchHHHHHHhCCcEEecccc
Q 044031 296 ERSNQRFLWVVRNPSNAAEAELPEGFLERTKERGLVVKSWAPQSTILGHESVGGFVTHCGWSSVVEAVTYGVPMIAWPLY 375 (468)
Q Consensus 296 ~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~pq~~il~~~~~~~~ithgG~~s~~eal~~GvP~v~~P~~ 375 (468)
+..+++++|+++...+ . +.+. ..+.|+.+.+|+||.++|+|+++ ||||||+||++||+++|||+|++|..
T Consensus 281 ~~~~~~~~~~~g~~~~--~----~~~~--~~~~~v~~~~~~~~~~~l~~~d~--~v~~~G~~t~~Ea~~~G~P~i~~p~~ 350 (424)
T 2iya_A 281 DGLDWHVVLSVGRFVD--P----ADLG--EVPPNVEVHQWVPQLDILTKASA--FITHAGMGSTMEALSNAVPMVAVPQI 350 (424)
T ss_dssp TTCSSEEEEECCTTSC--G----GGGC--SCCTTEEEESSCCHHHHHTTCSE--EEECCCHHHHHHHHHTTCCEEECCCS
T ss_pred hcCCcEEEEEECCcCC--h----HHhc--cCCCCeEEecCCCHHHHHhhCCE--EEECCchhHHHHHHHcCCCEEEecCc
Confidence 9889999999886411 0 1111 12457888899999999999998 99999999999999999999999999
Q ss_pred cchhhHHHHHHhhcceeeeeccCCcccccCCCCccccHHHHHHHHHHHhcCchhHHHHHHHHHHHHHHHH
Q 044031 376 AEQFLNSVALVQEMKVAMPMFLNGEEETIGNGEGVVSAERVEERVRELMMGSEGKALRERSLEMRMMAAT 445 (468)
Q Consensus 376 ~DQ~~na~~~~~~~g~g~~~~~~~~~~~~~~~~~~~~~~~l~~av~~~l~~~~~~~~~~~a~~l~~~~~~ 445 (468)
.||+.||+++++ +|+|+.+.. ++ ++.++|.++|+++|+|+ +++++++++++.+++
T Consensus 351 ~dQ~~na~~l~~-~g~g~~~~~--------~~---~~~~~l~~~i~~ll~~~---~~~~~~~~~~~~~~~ 405 (424)
T 2iya_A 351 AEQTMNAERIVE-LGLGRHIPR--------DQ---VTAEKLREAVLAVASDP---GVAERLAAVRQEIRE 405 (424)
T ss_dssp HHHHHHHHHHHH-TTSEEECCG--------GG---CCHHHHHHHHHHHHHCH---HHHHHHHHHHHHHHT
T ss_pred cchHHHHHHHHH-CCCEEEcCc--------CC---CCHHHHHHHHHHHHcCH---HHHHHHHHHHHHHHh
Confidence 999999999974 699999874 34 89999999999999998 899999999988765
No 7
>4amg_A Snogd; transferase, polyketide biosynthesis, GT1 family, nogalamyci; HET: MLY; 2.59A {Streptomyces nogalater} PDB: 4an4_A* 4amb_A*
Probab=100.00 E-value=4.4e-41 Score=333.52 Aligned_cols=337 Identities=13% Similarity=0.146 Sum_probs=211.5
Q ss_pred ceEEEecCCCccCHHHHHHHHHHHHhCCCCcEEEEEeCCCCCCchhhhhhhhccccCCCCCeeEEEcCCCC------CCC
Q 044031 3 KTIALYPGPAFHHMISMVELGKLILQHRSDVSITILVPSMPLEESKTCSYINSISHRLNPIISFYYLPAIQ------MPS 76 (468)
Q Consensus 3 ~~Iv~~~~~~~GHv~P~l~LA~~L~~~G~~h~Vt~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~i~~~~------lp~ 76 (468)
|||+|+++|++||++|+++||++|++|| |+|||+++..... . ...++.+..+.... .+.
T Consensus 23 MRIL~~~~p~~GHv~P~l~LA~~L~~rG--h~Vt~~t~~~~~~------~-------~~~g~~~~~~~~~~~~~~~~~~~ 87 (400)
T 4amg_A 23 MRALFITSPGLSHILPTVPLAQALRALG--HEVRYATGGDIRA------V-------AEAGLCAVDVSPGVNYAKLFVPD 87 (400)
T ss_dssp CEEEEECCSSHHHHGGGHHHHHHHHHTT--CEEEEEECSSTHH------H-------HTTTCEEEESSTTCCSHHHHSCC
T ss_pred CeEEEECCCchhHHHHHHHHHHHHHHCC--CEEEEEeCcchhh------H-------HhcCCeeEecCCchhHhhhcccc
Confidence 5799999999999999999999999999 9999998653221 1 12256666664331 111
Q ss_pred CCCCh---------hHH----HHHHHHHhhHHHHHHHHhhhcCCCccEEEe----cCcHHHhhhCCCCeEEEecchhHHH
Q 044031 77 ETLSR---------ADI----AIESIKLNSSNVFQALENISLTSKILSFII----TSTTSFSYHPNIPTYTYFNSCASTL 139 (468)
Q Consensus 77 ~~~~~---------~~~----~~~~~~~~~~~l~~ll~~~~~~~~pD~vI~----~~~~~vA~~lgIP~i~~~~~~~~~~ 139 (468)
..... ... +..........+.+.++++ +||+||+ .++..+|+++|||++.+...+....
T Consensus 88 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~----~pD~Vv~d~~~~~~~~~A~~~gip~~~~~~~~~~~~ 163 (400)
T 4amg_A 88 DTDVTDPMHSEGLGEGFFAEMFARVSAVAVDGALRTARSW----RPDLVVHTPTQGAGPLTAAALQLPCVELPLGPADSE 163 (400)
T ss_dssp C------------CHHHHHHHHHHHHHHHHHHHHHHHHHH----CCSEEEECTTCTHHHHHHHHTTCCEEECCSSTTTCC
T ss_pred ccccccccchhhhhHHHHHHHHHHHHHHHHHHHHHHHHhc----CCCEEEECcchHHHHHHHHHcCCCceeecccccccc
Confidence 10000 000 1111222344455566666 9999999 6677799999999998765443321
Q ss_pred HHHHhhhhhhhcccCCCCCCCCccccCCCCCCCCCCCCCccccCCCchhHHHHHHHhhhhcccceEEecChhhhhHHHHH
Q 044031 140 AAILYLPTLHNQITSSFKDHPSSLLFIPGLPPVKSSFMPEPVLDRQKPIYDFFLNYSTSLSKSNGIIINTFDFLEQQAIK 219 (468)
Q Consensus 140 ~~~~~~p~~~~~~~~~~~~~~~~~~~~pg~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~s~~~le~~~~~ 219 (468)
..+..... . .+.....+................. ....
T Consensus 164 ~~~~~~~~--~------------------------------------~l~~~~~~~~~~~~~~~~~~~~~~~----~~~~ 201 (400)
T 4amg_A 164 PGLGALIR--R------------------------------------AMSKDYERHGVTGEPTGSVRLTTTP----PSVE 201 (400)
T ss_dssp HHHHHHHH--H------------------------------------HTHHHHHHTTCCCCCSCEEEEECCC----HHHH
T ss_pred cchhhHHH--H------------------------------------HHHHHHHHhCCCcccccchhhcccC----chhh
Confidence 11100000 0 0000000000000000111111110 0000
Q ss_pred HHHcCcccCCCCCCCeeEecccccCCcCCCCCCCCCCcchhHHhhcCCCCCceEEeccCCCcCCC--HHHHHHHHHHHHh
Q 044031 220 AIVNGDCVTNGTTPPLHCIGPLIVDAKDRAGGVSDDVSSDCLTWLDSQPSGSVVFLCFGSRGTFS--APQLKEIAIGLER 297 (468)
Q Consensus 220 ~~~~~~~~~~~~~p~~~~VGpl~~~~~~~~~~~~~~~~~~l~~~l~~~~~~~~v~vs~GS~~~~~--~~~~~~~~~al~~ 297 (468)
...... ...+..+.+.+.... ....+.+|++..+++++|||+|||+...+ .+.+.++++++++
T Consensus 202 ~~~~~~----~~~~~~~~~~~~~~~-----------~~~~~~~~l~~~~~~~~v~vs~Gs~~~~~~~~~~~~~~~~~l~~ 266 (400)
T 4amg_A 202 ALLPED----RRSPGAWPMRYVPYN-----------GGAVLPDWLPPAAGRRRIAVTLGSIDALSGGIAKLAPLFSEVAD 266 (400)
T ss_dssp HTSCGG----GCCTTCEECCCCCCC-----------CCEECCTTCSCCTTCCEEEECCCSCC--CCSSSTTHHHHHHGGG
T ss_pred ccCccc----ccCCcccCccccccc-----------ccccCcccccccCCCcEEEEeCCcccccCccHHHHHHHHHHhhc
Confidence 000000 001223333222211 22334468888888899999999987443 3567889999999
Q ss_pred CCCcEEEEEeCCCCccccCCChhHHhhccCCCeEecCCCCHHhhhCccCcceEEecCCcchHHHHHHhCCcEEecccccc
Q 044031 298 SNQRFLWVVRNPSNAAEAELPEGFLERTKERGLVVKSWAPQSTILGHESVGGFVTHCGWSSVVEAVTYGVPMIAWPLYAE 377 (468)
Q Consensus 298 ~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~pq~~il~~~~~~~~ithgG~~s~~eal~~GvP~v~~P~~~D 377 (468)
.++.+||..++...+.... .++|+.+.+|+||.++|+|+++ ||||||+||++||+++|||+|++|+++|
T Consensus 267 ~~~~~v~~~~~~~~~~~~~---------~~~~v~~~~~~p~~~lL~~~~~--~v~h~G~~s~~Eal~~GvP~v~~P~~~d 335 (400)
T 4amg_A 267 VDAEFVLTLGGGDLALLGE---------LPANVRVVEWIPLGALLETCDA--IIHHGGSGTLLTALAAGVPQCVIPHGSY 335 (400)
T ss_dssp SSSEEEEECCTTCCCCCCC---------CCTTEEEECCCCHHHHHTTCSE--EEECCCHHHHHHHHHHTCCEEECCC---
T ss_pred cCceEEEEecCcccccccc---------CCCCEEEEeecCHHHHhhhhhh--eeccCCccHHHHHHHhCCCEEEecCccc
Confidence 9999999988752111112 2457888899999999999988 9999999999999999999999999999
Q ss_pred hhhHHHHHHhhcceeeeeccCCcccccCCCCccccHHHHHHHHHHHhcCchhHHHHHHHHHHHHHHHH
Q 044031 378 QFLNSVALVQEMKVAMPMFLNGEEETIGNGEGVVSAERVEERVRELMMGSEGKALRERSLEMRMMAAT 445 (468)
Q Consensus 378 Q~~na~~~~~~~g~g~~~~~~~~~~~~~~~~~~~~~~~l~~av~~~l~~~~~~~~~~~a~~l~~~~~~ 445 (468)
|+.||+++++ +|+|+.++. .+ ++++ +|+++|+|+ +||+||+++++++++
T Consensus 336 Q~~na~~v~~-~G~g~~l~~--------~~---~~~~----al~~lL~d~---~~r~~a~~l~~~~~~ 384 (400)
T 4amg_A 336 QDTNRDVLTG-LGIGFDAEA--------GS---LGAE----QCRRLLDDA---GLREAALRVRQEMSE 384 (400)
T ss_dssp CHHHHHHHHH-HTSEEECCT--------TT---CSHH----HHHHHHHCH---HHHHHHHHHHHHHHT
T ss_pred HHHHHHHHHH-CCCEEEcCC--------CC---chHH----HHHHHHcCH---HHHHHHHHHHHHHHc
Confidence 9999999975 599999984 34 5554 677889999 999999999999886
No 8
>1iir_A Glycosyltransferase GTFB; rossmann fold; 1.80A {Amycolatopsis orientalis} SCOP: c.87.1.5
Probab=100.00 E-value=2.2e-39 Score=322.81 Aligned_cols=354 Identities=13% Similarity=0.122 Sum_probs=227.0
Q ss_pred ceEEEecCCCccCHHHHHHHHHHHHhCCCCcEEEEEeCCCCCCchhhhhhhhccccCCCCCeeEEEcCCCCCCCCC---C
Q 044031 3 KTIALYPGPAFHHMISMVELGKLILQHRSDVSITILVPSMPLEESKTCSYINSISHRLNPIISFYYLPAIQMPSET---L 79 (468)
Q Consensus 3 ~~Iv~~~~~~~GHv~P~l~LA~~L~~~G~~h~Vt~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~i~~~~lp~~~---~ 79 (468)
|||+++++|+.||++|+++||++|+++| |+|||+++.... ..+.. .+++|+.++.. ..+.. .
T Consensus 1 M~Il~~~~~~~GHv~P~l~la~~L~~~G--h~V~~~~~~~~~------~~v~~------~g~~~~~i~~~-~~~~~~~~~ 65 (415)
T 1iir_A 1 MRVLLATCGSRGDTEPLVALAVRVRDLG--ADVRMCAPPDCA------ERLAE------VGVPHVPVGPS-ARAPIQRAK 65 (415)
T ss_dssp CEEEEECCSCHHHHHHHHHHHHHHHHTT--CEEEEEECGGGH------HHHHH------TTCCEEECCC--------CCS
T ss_pred CeEEEEcCCCchhHHHHHHHHHHHHHCC--CeEEEEcCHHHH------HHHHH------cCCeeeeCCCC-HHHHhhccc
Confidence 3699999999999999999999999999 999999765421 12221 27888888765 21111 1
Q ss_pred -ChhHHHHHHHHHhhHHHHHHHHhhhc-CCCccEEEe-----cC--cHHHhhhCCCCeEEEecchhHHHHHHHhhhhhhh
Q 044031 80 -SRADIAIESIKLNSSNVFQALENISL-TSKILSFII-----TS--TTSFSYHPNIPTYTYFNSCASTLAAILYLPTLHN 150 (468)
Q Consensus 80 -~~~~~~~~~~~~~~~~l~~ll~~~~~-~~~pD~vI~-----~~--~~~vA~~lgIP~i~~~~~~~~~~~~~~~~p~~~~ 150 (468)
.....+...+. ....++++++.+ ..+||+||+ .| +..+|+++|||++.++.++++.... +.|
T Consensus 66 ~~~~~~~~~~~~---~~~~~~~~~l~~~~~~pD~vi~d~~~~~~~~~~~~A~~lgiP~v~~~~~~~~~~~~--~~p---- 136 (415)
T 1iir_A 66 PLTAEDVRRFTT---EAIATQFDEIPAAAEGCAAVVTTGLLAAAIGVRSVAEKLGIPYFYAFHCPSYVPSP--YYP---- 136 (415)
T ss_dssp CCCHHHHHHHHH---HHHHHHHHHHHHHTTTCSEEEEESCHHHHHHHHHHHHHHTCCEEEEESSGGGSCCS--SSC----
T ss_pred ccchHHHHHHHH---HHHHHHHHHHHHHhcCCCEEEECChhHhHhhHHHHHHHhCCCEEEEecCCCcCCCc--ccC----
Confidence 11111111111 122333333332 359999997 45 6779999999999998876442100 000
Q ss_pred cccCCCCCCCCccccCCCCCCCCCCCCCccccCC--CchhHHHHHHHhhhhcc---------------cceEEecChhhh
Q 044031 151 QITSSFKDHPSSLLFIPGLPPVKSSFMPEPVLDR--QKPIYDFFLNYSTSLSK---------------SNGIIINTFDFL 213 (468)
Q Consensus 151 ~~~~~~~~~~~~~~~~pg~~~~~~~~l~~~~~~~--~~~~~~~~~~~~~~~~~---------------~~~~l~~s~~~l 213 (468)
....++ +++...+...+... ....+..+.+......+ ...++.++.+.+
T Consensus 137 -------------~~~~~~-~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~l~~~~~~l 202 (415)
T 1iir_A 137 -------------PPPLGE-PSTQDTIDIPAQWERNNQSAYQRYGGLLNSHRDAIGLPPVEDIFTFGYTDHPWVAADPVL 202 (415)
T ss_dssp -------------CCC----------CHHHHHHHHHHHHHHHHHHHHHHHHHHHTTCCCCCCHHHHHHCSSCEECSCTTT
T ss_pred -------------CccCCc-cccchHHHHHHHHHHHHHHHHHHhHHHHHHHHHHcCCCCCCccccccCCCCEEEeeChhh
Confidence 000000 01000000000000 00000000000000000 013455555555
Q ss_pred hHHHHHHHHcCcccCCCCCCCeeEecccccCCcCCCCCCCCCCcchhHHhhcCCCCCceEEeccCCCcCCCHHHHHHHHH
Q 044031 214 EQQAIKAIVNGDCVTNGTTPPLHCIGPLIVDAKDRAGGVSDDVSSDCLTWLDSQPSGSVVFLCFGSRGTFSAPQLKEIAI 293 (468)
Q Consensus 214 e~~~~~~~~~~~~~~~~~~p~~~~VGpl~~~~~~~~~~~~~~~~~~l~~~l~~~~~~~~v~vs~GS~~~~~~~~~~~~~~ 293 (468)
++. +...+ ++++|||++..+. .. .+.++.+||+.++ ++|||++||+. ...+.+..+++
T Consensus 203 ~~~-----------~~~~~-~~~~vG~~~~~~~-~~------~~~~~~~~l~~~~--~~v~v~~Gs~~-~~~~~~~~~~~ 260 (415)
T 1iir_A 203 APL-----------QPTDL-DAVQTGAWILPDE-RP------LSPELAAFLDAGP--PPVYLGFGSLG-APADAVRVAID 260 (415)
T ss_dssp SCC-----------CCCSS-CCEECCCCCCCCC-CC------CCHHHHHHHHTSS--CCEEEECC----CCHHHHHHHHH
T ss_pred cCC-----------CcccC-CeEeeCCCccCcc-cC------CCHHHHHHHhhCC--CeEEEeCCCCC-CcHHHHHHHHH
Confidence 420 01112 7999999986532 12 5778999998754 59999999997 56777888999
Q ss_pred HHHhCCCcEEEEEeCCCCccccCCChhHHhhccCCCeEecCCCCHHhhhCccCcceEEecCCcchHHHHHHhCCcEEecc
Q 044031 294 GLERSNQRFLWVVRNPSNAAEAELPEGFLERTKERGLVVKSWAPQSTILGHESVGGFVTHCGWSSVVEAVTYGVPMIAWP 373 (468)
Q Consensus 294 al~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~pq~~il~~~~~~~~ithgG~~s~~eal~~GvP~v~~P 373 (468)
+|+..+++++|++|.... . . ...++|+.+.+|+||.++|+++++ ||||||+||++||+++|||+|++|
T Consensus 261 al~~~~~~~v~~~g~~~~---~-~------~~~~~~v~~~~~~~~~~~l~~~d~--~v~~~G~~t~~Ea~~~G~P~i~~p 328 (415)
T 1iir_A 261 AIRAHGRRVILSRGWADL---V-L------PDDGADCFAIGEVNHQVLFGRVAA--VIHHGGAGTTHVAARAGAPQILLP 328 (415)
T ss_dssp HHHHTTCCEEECTTCTTC---C-C------SSCGGGEEECSSCCHHHHGGGSSE--EEECCCHHHHHHHHHHTCCEEECC
T ss_pred HHHHCCCeEEEEeCCCcc---c-c------cCCCCCEEEeCcCChHHHHhhCCE--EEeCCChhHHHHHHHcCCCEEECC
Confidence 999999999999886510 0 1 012347889999999999966666 999999999999999999999999
Q ss_pred cccchhhHHHHHHhhcceeeeeccCCcccccCCCCccccHHHHHHHHHHHhcCchhHHHHHHHHHHHHHHH
Q 044031 374 LYAEQFLNSVALVQEMKVAMPMFLNGEEETIGNGEGVVSAERVEERVRELMMGSEGKALRERSLEMRMMAA 444 (468)
Q Consensus 374 ~~~DQ~~na~~~~~~~g~g~~~~~~~~~~~~~~~~~~~~~~~l~~av~~~l~~~~~~~~~~~a~~l~~~~~ 444 (468)
+.+||+.||++++ ++|+|+.++. ++ ++.++|.++|+++ +|+ +++++++++++.++
T Consensus 329 ~~~dQ~~na~~l~-~~g~g~~~~~--------~~---~~~~~l~~~i~~l-~~~---~~~~~~~~~~~~~~ 383 (415)
T 1iir_A 329 QMADQPYYAGRVA-ELGVGVAHDG--------PI---PTFDSLSAALATA-LTP---ETHARATAVAGTIR 383 (415)
T ss_dssp CSTTHHHHHHHHH-HHTSEEECSS--------SS---CCHHHHHHHHHHH-TSH---HHHHHHHHHHHHSC
T ss_pred CCCccHHHHHHHH-HCCCcccCCc--------CC---CCHHHHHHHHHHH-cCH---HHHHHHHHHHHHHh
Confidence 9999999999996 5699999874 45 8999999999999 988 89999988887654
No 9
>1rrv_A Glycosyltransferase GTFD; GT-B, glycosyltransferase, rossmann fold, glycopeptide, VACO antibiotic, transferase-antibiotic complex; HET: OMZ GHP OMY 3FG TYD BGC; 2.00A {Amycolatopsis orientalis} SCOP: c.87.1.5
Probab=100.00 E-value=8.3e-39 Score=318.82 Aligned_cols=350 Identities=11% Similarity=0.039 Sum_probs=229.5
Q ss_pred ceEEEecCCCccCHHHHHHHHHHHHhCCCCcEEEEEeCCCCCCchhhhhhhhccccCCCCCeeEEEcCCCCCCCCC----
Q 044031 3 KTIALYPGPAFHHMISMVELGKLILQHRSDVSITILVPSMPLEESKTCSYINSISHRLNPIISFYYLPAIQMPSET---- 78 (468)
Q Consensus 3 ~~Iv~~~~~~~GHv~P~l~LA~~L~~~G~~h~Vt~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~i~~~~lp~~~---- 78 (468)
|||+++++++.||++|+++||++|+++| |+|+|+++... ...+.. .+++|+.++.. .....
T Consensus 1 MrIl~~~~~~~GH~~p~l~la~~L~~~G--h~V~~~~~~~~------~~~v~~------~g~~~~~~~~~-~~~~~~~~~ 65 (416)
T 1rrv_A 1 MRVLLSVCGTRGDVEIGVALADRLKALG--VQTRMCAPPAA------EERLAE------VGVPHVPVGLP-QHMMLQEGM 65 (416)
T ss_dssp CEEEEEEESCHHHHHHHHHHHHHHHHTT--CEEEEEECGGG------HHHHHH------HTCCEEECSCC-GGGCCCTTS
T ss_pred CeEEEEecCCCccHHHHHHHHHHHHHCC--CeEEEEeCHHH------HHHHHH------cCCeeeecCCC-HHHHHhhcc
Confidence 3699999999999999999999999999 99999976431 112222 27888888755 21110
Q ss_pred -CChhHHHHHHHHHhhHHHHHHHHhhhc-CCCccEEEe-----cC--cHHHhhhCCCCeEEEecchhHHHHHHHhhhhhh
Q 044031 79 -LSRADIAIESIKLNSSNVFQALENISL-TSKILSFII-----TS--TTSFSYHPNIPTYTYFNSCASTLAAILYLPTLH 149 (468)
Q Consensus 79 -~~~~~~~~~~~~~~~~~l~~ll~~~~~-~~~pD~vI~-----~~--~~~vA~~lgIP~i~~~~~~~~~~~~~~~~p~~~ 149 (468)
......+...+... ..++++.+.+ ..+||+||+ .+ +..+|+++|||++.+..++.+...
T Consensus 66 ~~~~~~~~~~~~~~~---~~~~~~~l~~~~~~pD~vi~d~~~~~~~~~~~~A~~~giP~v~~~~~~~~~~~--------- 133 (416)
T 1rrv_A 66 PPPPPEEEQRLAAMT---VEMQFDAVPGAAEGCAAVVAVGDLAAATGVRSVAEKLGLPFFYSVPSPVYLAS--------- 133 (416)
T ss_dssp CCCCHHHHHHHHHHH---HHHHHHHHHHHTTTCSEEEEEECHHHHHHHHHHHHHHTCCEEEEESSGGGSCC---------
T ss_pred ccchhHHHHHHHHHH---HHHHHHHHHHHhcCCCEEEEcCchHHHHHHHHHHHHcCCCEEEEeCCCCCCCC---------
Confidence 11111111112111 2333333321 248999998 34 677899999999998876533100
Q ss_pred hcccCCCCCCCCccccCC-CCC-CCCCCCCCccccCC-Cc-hhHH-------HHHHHh---------hhhcccceEEecC
Q 044031 150 NQITSSFKDHPSSLLFIP-GLP-PVKSSFMPEPVLDR-QK-PIYD-------FFLNYS---------TSLSKSNGIIINT 209 (468)
Q Consensus 150 ~~~~~~~~~~~~~~~~~p-g~~-~~~~~~l~~~~~~~-~~-~~~~-------~~~~~~---------~~~~~~~~~l~~s 209 (468)
..+| .++ +.....+...+... .. ..+. .+.+.. ...... .+++++
T Consensus 134 --------------~~~p~~~~~~~~~~r~~n~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~-~~l~~~ 198 (416)
T 1rrv_A 134 --------------PHLPPAYDEPTTPGVTDIRVLWEERAARFADRYGPTLNRRRAEIGLPPVEDVFGYGHGE-RPLLAA 198 (416)
T ss_dssp --------------SSSCCCBCSCCCTTCCCHHHHHHHHHHHHHHHHHHHHHHHHHHTTCCCCSCHHHHTTCS-SCEECS
T ss_pred --------------cccCCCCCCCCCchHHHHHHHHHHHHHHHHHHhHHHHHHHHHHcCCCCCCchhhhccCC-CeEEcc
Confidence 0011 110 00000000000000 00 0000 010000 000111 345566
Q ss_pred hhhhhHHHHHHHHcCcccCCCCCCCeeEecccccCCcCCCCCCCCCCcchhHHhhcCCCCCceEEeccCCCcC-CCHHHH
Q 044031 210 FDFLEQQAIKAIVNGDCVTNGTTPPLHCIGPLIVDAKDRAGGVSDDVSSDCLTWLDSQPSGSVVFLCFGSRGT-FSAPQL 288 (468)
Q Consensus 210 ~~~le~~~~~~~~~~~~~~~~~~p~~~~VGpl~~~~~~~~~~~~~~~~~~l~~~l~~~~~~~~v~vs~GS~~~-~~~~~~ 288 (468)
.+.++++. +. .++++|||++.+.. .. .+.++.+||+.++ ++|||++||+.. ...+.+
T Consensus 199 ~~~l~~~~------------~~-~~~~~vG~~~~~~~-~~------~~~~~~~~l~~~~--~~v~v~~Gs~~~~~~~~~~ 256 (416)
T 1rrv_A 199 DPVLAPLQ------------PD-VDAVQTGAWLLSDE-RP------LPPELEAFLAAGS--PPVHIGFGSSSGRGIADAA 256 (416)
T ss_dssp CTTTSCCC------------SS-CCCEECCCCCCCCC-CC------CCHHHHHHHHSSS--CCEEECCTTCCSHHHHHHH
T ss_pred CccccCCC------------CC-CCeeeECCCccCcc-CC------CCHHHHHHHhcCC--CeEEEecCCCCccChHHHH
Confidence 55554310 01 27899999987532 11 5778899998753 599999999964 344667
Q ss_pred HHHHHHHHhCCCcEEEEEeCCCCccccCCChhHHhhccCCCeEecCCCCHHhhhCccCcceEEecCCcchHHHHHHhCCc
Q 044031 289 KEIAIGLERSNQRFLWVVRNPSNAAEAELPEGFLERTKERGLVVKSWAPQSTILGHESVGGFVTHCGWSSVVEAVTYGVP 368 (468)
Q Consensus 289 ~~~~~al~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~pq~~il~~~~~~~~ithgG~~s~~eal~~GvP 368 (468)
.+++++|+..+++|+|++|.... . . . ..++|+.+.+|+||.++|+++++ ||||||+||++||+++|||
T Consensus 257 ~~~~~al~~~~~~~v~~~g~~~~---~-~-~-----~~~~~v~~~~~~~~~~ll~~~d~--~v~~~G~~t~~Ea~~~G~P 324 (416)
T 1rrv_A 257 KVAVEAIRAQGRRVILSRGWTEL---V-L-P-----DDRDDCFAIDEVNFQALFRRVAA--VIHHGSAGTEHVATRAGVP 324 (416)
T ss_dssp HHHHHHHHHTTCCEEEECTTTTC---C-C-S-----CCCTTEEEESSCCHHHHGGGSSE--EEECCCHHHHHHHHHHTCC
T ss_pred HHHHHHHHHCCCeEEEEeCCccc---c-c-c-----CCCCCEEEeccCChHHHhccCCE--EEecCChhHHHHHHHcCCC
Confidence 78999999999999999887510 0 1 1 12457888899999999977776 9999999999999999999
Q ss_pred EEecccccchhhHHHHHHhhcceeeeeccCCcccccCCCCccccHHHHHHHHHHHhcCchhHHHHHHHHHHHHHHH
Q 044031 369 MIAWPLYAEQFLNSVALVQEMKVAMPMFLNGEEETIGNGEGVVSAERVEERVRELMMGSEGKALRERSLEMRMMAA 444 (468)
Q Consensus 369 ~v~~P~~~DQ~~na~~~~~~~g~g~~~~~~~~~~~~~~~~~~~~~~~l~~av~~~l~~~~~~~~~~~a~~l~~~~~ 444 (468)
+|++|+..||+.||+++++ +|+|+.++. .+ ++.++|.++|+++ +|+ +|+++++++++.++
T Consensus 325 ~i~~p~~~dQ~~na~~l~~-~g~g~~~~~--------~~---~~~~~l~~~i~~l-~~~---~~~~~~~~~~~~~~ 384 (416)
T 1rrv_A 325 QLVIPRNTDQPYFAGRVAA-LGIGVAHDG--------PT---PTFESLSAALTTV-LAP---ETRARAEAVAGMVL 384 (416)
T ss_dssp EEECCCSBTHHHHHHHHHH-HTSEEECSS--------SC---CCHHHHHHHHHHH-TSH---HHHHHHHHHTTTCC
T ss_pred EEEccCCCCcHHHHHHHHH-CCCccCCCC--------CC---CCHHHHHHHHHHh-hCH---HHHHHHHHHHHHHh
Confidence 9999999999999999975 599999873 45 8999999999999 998 89999988877554
No 10
>3h4t_A Glycosyltransferase GTFA, glycosyltransferase; vancomycin, teicoplanin, ORF1, natural products, antibiotic; HET: UDP; 1.15A {Amycolatopsis orientalis} SCOP: c.87.1.5 PDB: 3h4i_A* 1pn3_A* 1pnv_A*
Probab=100.00 E-value=2.6e-36 Score=299.37 Aligned_cols=334 Identities=11% Similarity=0.046 Sum_probs=221.4
Q ss_pred eEEEecCCCccCHHHHHHHHHHHHhCCCCcEEEEEeCCCCCCchhhhhhhhccccCCCCCeeEEEcCCCCCCC------C
Q 044031 4 TIALYPGPAFHHMISMVELGKLILQHRSDVSITILVPSMPLEESKTCSYINSISHRLNPIISFYYLPAIQMPS------E 77 (468)
Q Consensus 4 ~Iv~~~~~~~GHv~P~l~LA~~L~~~G~~h~Vt~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~i~~~~lp~------~ 77 (468)
||+|++.++.||++|++.||++|+++| |+|+|+++.. +...++. .+++|..++...... .
T Consensus 2 rIli~~~gt~Ghv~p~~~La~~L~~~G--h~V~v~~~~~------~~~~v~~------~g~~~~~l~~~~~~~~~~~~~~ 67 (404)
T 3h4t_A 2 GVLITGCGSRGDTEPLVALAARLRELG--ADARMCLPPD------YVERCAE------VGVPMVPVGRAVRAGAREPGEL 67 (404)
T ss_dssp CEEEEEESSHHHHHHHHHHHHHHHHTT--CCEEEEECGG------GHHHHHH------TTCCEEECSSCSSGGGSCTTCC
T ss_pred eEEEEeCCCCccHHHHHHHHHHHHHCC--CeEEEEeCHH------HHHHHHH------cCCceeecCCCHHHHhccccCC
Confidence 599999999999999999999999999 9999997643 1222222 278888887552100 1
Q ss_pred CCChhHHHHHHHHHhhHHHHHHHHhhhcCCCccEEEe----cCc---HHHhhhCCCCeEEEecchhHHHHHHHhhhhhhh
Q 044031 78 TLSRADIAIESIKLNSSNVFQALENISLTSKILSFII----TST---TSFSYHPNIPTYTYFNSCASTLAAILYLPTLHN 150 (468)
Q Consensus 78 ~~~~~~~~~~~~~~~~~~l~~ll~~~~~~~~pD~vI~----~~~---~~vA~~lgIP~i~~~~~~~~~~~~~~~~p~~~~ 150 (468)
.......+........ .++.+ .. .+||+||+ .++ ..+|+++|||++....++....+..+. ..
T Consensus 68 ~~~~~~~~~~~~~~~~---~~l~~-~~--~~pD~Vi~~~~~~~~~~a~~~A~~lgiP~v~~~~~p~~~~~~~~~--~~-- 137 (404)
T 3h4t_A 68 PPGAAEVVTEVVAEWF---DKVPA-AI--EGCDAVVTTGLLPAAVAVRSMAEKLGIPYRYTVLSPDHLPSEQSQ--AE-- 137 (404)
T ss_dssp CTTCGGGHHHHHHHHH---HHHHH-HH--TTCSEEEEEECHHHHHHHHHHHHHHTCCEEEEESSGGGSGGGSCH--HH--
T ss_pred HHHHHHHHHHHHHHHH---HHHHH-Hh--cCCCEEEECCchhhhhhhhhHHhhcCCCEEEEEcCCccCCChhHH--HH--
Confidence 1111111112122222 22222 22 27999988 223 568999999999887766421000000 00
Q ss_pred cccCCCCCCCCccccCCCCCCCCCCCCCccccCCCchhHHHHHHHhhhhcc---------------cceEEecChhhhhH
Q 044031 151 QITSSFKDHPSSLLFIPGLPPVKSSFMPEPVLDRQKPIYDFFLNYSTSLSK---------------SNGIIINTFDFLEQ 215 (468)
Q Consensus 151 ~~~~~~~~~~~~~~~~pg~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~---------------~~~~l~~s~~~le~ 215 (468)
...++...+..+.+..+.... .+..+.+..+.+.
T Consensus 138 ------------------------------~~~~~~~~~~~~~~~~~~~~~~lgl~~~~~~~~~~~~~~~l~~~~~~l~- 186 (404)
T 3h4t_A 138 ------------------------------RDMYNQGADRLFGDAVNSHRASIGLPPVEHLYDYGYTDQPWLAADPVLS- 186 (404)
T ss_dssp ------------------------------HHHHHHHHHHHHHHHHHHHHHHTTCCCCCCHHHHHHCSSCEECSCTTTS-
T ss_pred ------------------------------HHHHHHHHHHHhHHHHHHHHHHcCCCCCcchhhccccCCeEEeeCccee-
Confidence 000000000000000000000 0111222222221
Q ss_pred HHHHHHHcCcccCCCC-CCCeeEecccccCCcCCCCCCCCCCcchhHHhhcCCCCCceEEeccCCCcCCCHHHHHHHHHH
Q 044031 216 QAIKAIVNGDCVTNGT-TPPLHCIGPLIVDAKDRAGGVSDDVSSDCLTWLDSQPSGSVVFLCFGSRGTFSAPQLKEIAIG 294 (468)
Q Consensus 216 ~~~~~~~~~~~~~~~~-~p~~~~VGpl~~~~~~~~~~~~~~~~~~l~~~l~~~~~~~~v~vs~GS~~~~~~~~~~~~~~a 294 (468)
|.++ .++++++|+++.+.. .. .++++.+|++.. +++|||++||+.. ..+.+..++++
T Consensus 187 ------------p~~~~~~~~~~~G~~~~~~~-~~------~~~~l~~~l~~~--~~~Vlv~~Gs~~~-~~~~~~~~~~a 244 (404)
T 3h4t_A 187 ------------PLRPTDLGTVQTGAWILPDQ-RP------LSAELEGFLRAG--SPPVYVGFGSGPA-PAEAARVAIEA 244 (404)
T ss_dssp ------------CCCTTCCSCCBCCCCCCCCC-CC------CCHHHHHHHHTS--SCCEEECCTTSCC-CTTHHHHHHHH
T ss_pred ------------CCCCCCCCeEEeCccccCCC-CC------CCHHHHHHHhcC--CCeEEEECCCCCC-cHHHHHHHHHH
Confidence 1111 257889998876432 22 678899999864 3499999999986 66778889999
Q ss_pred HHhCCCcEEEEEeCCCCccccCCChhHHhhccCCCeEecCCCCHHhhhCccCcceEEecCCcchHHHHHHhCCcEEeccc
Q 044031 295 LERSNQRFLWVVRNPSNAAEAELPEGFLERTKERGLVVKSWAPQSTILGHESVGGFVTHCGWSSVVEAVTYGVPMIAWPL 374 (468)
Q Consensus 295 l~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~pq~~il~~~~~~~~ithgG~~s~~eal~~GvP~v~~P~ 374 (468)
++..++++||++++.. .. .. ...+|+.+.+|+||.++|+++++ ||||||+||++|++++|||+|++|+
T Consensus 245 l~~~~~~vv~~~g~~~---~~-~~------~~~~~v~~~~~~~~~~ll~~~d~--~v~~gG~~t~~Eal~~GvP~v~~p~ 312 (404)
T 3h4t_A 245 VRAQGRRVVLSSGWAG---LG-RI------DEGDDCLVVGEVNHQVLFGRVAA--VVHHGGAGTTTAVTRAGAPQVVVPQ 312 (404)
T ss_dssp HHHTTCCEEEECTTTT---CC-CS------SCCTTEEEESSCCHHHHGGGSSE--EEECCCHHHHHHHHHHTCCEEECCC
T ss_pred HHhCCCEEEEEeCCcc---cc-cc------cCCCCEEEecCCCHHHHHhhCcE--EEECCcHHHHHHHHHcCCCEEEcCC
Confidence 9999999999988651 01 11 12468888899999999988887 9999999999999999999999999
Q ss_pred ccchhhHHHHHHhhcceeeeeccCCcccccCCCCccccHHHHHHHHHHHhcCchhHHHHHHHHHHHHH
Q 044031 375 YAEQFLNSVALVQEMKVAMPMFLNGEEETIGNGEGVVSAERVEERVRELMMGSEGKALRERSLEMRMM 442 (468)
Q Consensus 375 ~~DQ~~na~~~~~~~g~g~~~~~~~~~~~~~~~~~~~~~~~l~~av~~~l~~~~~~~~~~~a~~l~~~ 442 (468)
.+||+.||+++++ .|+|+.+.. .+ ++.++|.++|+++++ + +|+++++++++.
T Consensus 313 ~~dQ~~na~~~~~-~G~g~~l~~--------~~---~~~~~l~~ai~~ll~-~---~~~~~~~~~~~~ 364 (404)
T 3h4t_A 313 KADQPYYAGRVAD-LGVGVAHDG--------PT---PTVESLSAALATALT-P---GIRARAAAVAGT 364 (404)
T ss_dssp STTHHHHHHHHHH-HTSEEECSS--------SS---CCHHHHHHHHHHHTS-H---HHHHHHHHHHTT
T ss_pred cccHHHHHHHHHH-CCCEeccCc--------CC---CCHHHHHHHHHHHhC-H---HHHHHHHHHHHH
Confidence 9999999999975 599999974 45 899999999999998 7 899998888774
No 11
>3rsc_A CALG2; TDP, enediyne, structural genomics, PSI-2, protein structure initiative, center for eukaryotic structural genomics; HET: TYD C0T; 2.19A {Micromonospora echinospora} PDB: 3iaa_A*
Probab=100.00 E-value=2.5e-35 Score=293.62 Aligned_cols=354 Identities=10% Similarity=0.052 Sum_probs=226.5
Q ss_pred cceEEEecCCCccCHHHHHHHHHHHHhCCCCcEEEEEeCCCCCCchhhhhhhhccccCCCCCeeEEEcCCCCCCCCCC--
Q 044031 2 KKTIALYPGPAFHHMISMVELGKLILQHRSDVSITILVPSMPLEESKTCSYINSISHRLNPIISFYYLPAIQMPSETL-- 79 (468)
Q Consensus 2 ~~~Iv~~~~~~~GHv~P~l~LA~~L~~~G~~h~Vt~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~i~~~~lp~~~~-- 79 (468)
|+||+|+++++.||++|++.||++|+++| |+|+|+++... ...+. ..++++..++.. ++....
T Consensus 20 m~rIl~~~~~~~GHv~p~l~La~~L~~~G--h~V~v~~~~~~------~~~~~------~~G~~~~~~~~~-~~~~~~~~ 84 (415)
T 3rsc_A 20 MAHLLIVNVASHGLILPTLTVVTELVRRG--HRVSYVTAGGF------AEPVR------AAGATVVPYQSE-IIDADAAE 84 (415)
T ss_dssp CCEEEEECCSCHHHHGGGHHHHHHHHHTT--CEEEEEECGGG------HHHHH------HTTCEEEECCCS-TTTCCHHH
T ss_pred CCEEEEEeCCCccccccHHHHHHHHHHCC--CEEEEEeCHHH------HHHHH------hcCCEEEecccc-ccccccch
Confidence 36899999999999999999999999999 99999974321 11222 227888888755 332110
Q ss_pred -----ChhHHHHH-HHHH---hhHHHHHHHHhhhcCCCccEEEe-----cCcHHHhhhCCCCeEEEecchhHHHHHHHhh
Q 044031 80 -----SRADIAIE-SIKL---NSSNVFQALENISLTSKILSFII-----TSTTSFSYHPNIPTYTYFNSCASTLAAILYL 145 (468)
Q Consensus 80 -----~~~~~~~~-~~~~---~~~~l~~ll~~~~~~~~pD~vI~-----~~~~~vA~~lgIP~i~~~~~~~~~~~~~~~~ 145 (468)
.....+.. .... ....+.+.+++ .+||+||+ .++..+|+++|||++.+.+......... ..
T Consensus 85 ~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~----~~PDlVi~d~~~~~~~~~aA~~~giP~v~~~~~~~~~~~~~-~~ 159 (415)
T 3rsc_A 85 VFGSDDLGVRPHLMYLRENVSVLRATAEALDG----DVPDLVLYDDFPFIAGQLLAARWRRPAVRLSAAFASNEHYS-FS 159 (415)
T ss_dssp HHHSSSSCHHHHHHHHHHHHHHHHHHHHHHSS----SCCSEEEEESTTHHHHHHHHHHTTCCEEEEESSCCCCSSCC-HH
T ss_pred hhccccHHHHHHHHHHHHHHHHHHHHHHHHhc----cCCCEEEECchhhhHHHHHHHHhCCCEEEEEecccccCccc-cc
Confidence 00000111 1111 22333333333 49999998 4466688999999998764332100000 00
Q ss_pred hhhhhcccCCCCCCCCccccCCCCCCCCCCCCCccccCCCchhHHHHHHHh-------hhhc-ccceEEecChhhhhHHH
Q 044031 146 PTLHNQITSSFKDHPSSLLFIPGLPPVKSSFMPEPVLDRQKPIYDFFLNYS-------TSLS-KSNGIIINTFDFLEQQA 217 (468)
Q Consensus 146 p~~~~~~~~~~~~~~~~~~~~pg~~~~~~~~l~~~~~~~~~~~~~~~~~~~-------~~~~-~~~~~l~~s~~~le~~~ 217 (468)
+.+... ..... +.... ......+.+.+.. .... ..+..+...-..++..
T Consensus 160 ~~~~~~-------------~~~~~--------p~~~~-~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~l~~~~~~~~~~- 216 (415)
T 3rsc_A 160 QDMVTL-------------AGTID--------PLDLP-VFRDTLRDLLAEHGLSRSVVDCWNHVEQLNLVFVPKAFQIA- 216 (415)
T ss_dssp HHHHHH-------------HTCCC--------GGGCH-HHHHHHHHHHHHTTCCCCHHHHHTCCCSEEEESSCTTTSTT-
T ss_pred cccccc-------------cccCC--------hhhHH-HHHHHHHHHHHHcCCCCChhhhhcCCCCeEEEEcCcccCCC-
Confidence 000000 00000 00000 0000001111000 0000 1133333332222211
Q ss_pred HHHHHcCcccCCCCCCCeeEecccccCCcCCCCCCCCCCcchhHHhhcCCCCCceEEeccCCCcCCCHHHHHHHHHHHHh
Q 044031 218 IKAIVNGDCVTNGTTPPLHCIGPLIVDAKDRAGGVSDDVSSDCLTWLDSQPSGSVVFLCFGSRGTFSAPQLKEIAIGLER 297 (468)
Q Consensus 218 ~~~~~~~~~~~~~~~p~~~~VGpl~~~~~~~~~~~~~~~~~~l~~~l~~~~~~~~v~vs~GS~~~~~~~~~~~~~~al~~ 297 (468)
... ...++.++||++.... +..+|....+++++|||++||......+.+..++++++.
T Consensus 217 ----~~~------~~~~~~~vGp~~~~~~------------~~~~~~~~~~~~~~v~v~~Gs~~~~~~~~~~~~~~al~~ 274 (415)
T 3rsc_A 217 ----GDT------FDDRFVFVGPCFDDRR------------FLGEWTRPADDLPVVLVSLGTTFNDRPGFFRDCARAFDG 274 (415)
T ss_dssp ----GGG------CCTTEEECCCCCCCCG------------GGCCCCCCSSCCCEEEEECTTTSCCCHHHHHHHHHHHTT
T ss_pred ----ccc------CCCceEEeCCCCCCcc------------cCcCccccCCCCCEEEEECCCCCCChHHHHHHHHHHHhc
Confidence 010 1246899999875432 112354444566799999999987777778889999999
Q ss_pred CCCcEEEEEeCCCCccccCCChhHHhhccCCCeEecCCCCHHhhhCccCcceEEecCCcchHHHHHHhCCcEEecccccc
Q 044031 298 SNQRFLWVVRNPSNAAEAELPEGFLERTKERGLVVKSWAPQSTILGHESVGGFVTHCGWSSVVEAVTYGVPMIAWPLYAE 377 (468)
Q Consensus 298 ~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~pq~~il~~~~~~~~ithgG~~s~~eal~~GvP~v~~P~~~D 377 (468)
.+.+++|.++...+ . +.+. ..+.|+.+.+|+|+.++|+++++ ||||||+||++|++++|+|+|++|...|
T Consensus 275 ~~~~~v~~~g~~~~--~----~~l~--~~~~~v~~~~~~~~~~ll~~ad~--~v~~~G~~t~~Ea~~~G~P~v~~p~~~~ 344 (415)
T 3rsc_A 275 QPWHVVMTLGGQVD--P----AALG--DLPPNVEAHRWVPHVKVLEQATV--CVTHGGMGTLMEALYWGRPLVVVPQSFD 344 (415)
T ss_dssp SSCEEEEECTTTSC--G----GGGC--CCCTTEEEESCCCHHHHHHHEEE--EEESCCHHHHHHHHHTTCCEEECCCSGG
T ss_pred CCcEEEEEeCCCCC--h----HHhc--CCCCcEEEEecCCHHHHHhhCCE--EEECCcHHHHHHHHHhCCCEEEeCCcch
Confidence 88999998886411 0 1111 12458888899999999999888 9999999999999999999999999999
Q ss_pred hhhHHHHHHhhcceeeeeccCCcccccCCCCccccHHHHHHHHHHHhcCchhHHHHHHHHHHHHHHHH
Q 044031 378 QFLNSVALVQEMKVAMPMFLNGEEETIGNGEGVVSAERVEERVRELMMGSEGKALRERSLEMRMMAAT 445 (468)
Q Consensus 378 Q~~na~~~~~~~g~g~~~~~~~~~~~~~~~~~~~~~~~l~~av~~~l~~~~~~~~~~~a~~l~~~~~~ 445 (468)
|+.||+++++. |+|+.+.. .+ ++.++|.++|+++|+|+ +++++++++++.+.+
T Consensus 345 q~~~a~~l~~~-g~g~~~~~--------~~---~~~~~l~~~i~~ll~~~---~~~~~~~~~~~~~~~ 397 (415)
T 3rsc_A 345 VQPMARRVDQL-GLGAVLPG--------EK---ADGDTLLAAVGAVAADP---ALLARVEAMRGHVRR 397 (415)
T ss_dssp GHHHHHHHHHH-TCEEECCG--------GG---CCHHHHHHHHHHHHTCH---HHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHc-CCEEEccc--------CC---CCHHHHHHHHHHHHcCH---HHHHHHHHHHHHHHh
Confidence 99999999765 99999874 35 89999999999999999 899999998888765
No 12
>3ia7_A CALG4; glycosysltransferase, calicheamicin, enediyne, transf; 1.91A {Micromonospora echinospora}
Probab=100.00 E-value=7.3e-35 Score=288.84 Aligned_cols=368 Identities=13% Similarity=0.133 Sum_probs=231.3
Q ss_pred Ccc-eEEEecCCCccCHHHHHHHHHHHHhCCCCcEEEEEeCCCCCCchhhhhhhhccccCCCCCeeEEEcCCCCCCCC--
Q 044031 1 MKK-TIALYPGPAFHHMISMVELGKLILQHRSDVSITILVPSMPLEESKTCSYINSISHRLNPIISFYYLPAIQMPSE-- 77 (468)
Q Consensus 1 m~~-~Iv~~~~~~~GHv~P~l~LA~~L~~~G~~h~Vt~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~i~~~~lp~~-- 77 (468)
|+| ||+++++++.||++|++.||++|+++| |+|+|+++.. +...+.. .++++..++.. ++..
T Consensus 2 m~M~~il~~~~~~~Ghv~~~~~La~~L~~~G--heV~v~~~~~------~~~~~~~------~G~~~~~~~~~-~~~~~~ 66 (402)
T 3ia7_A 2 MRQRHILFANVQGHGHVYPSLGLVSELARRG--HRITYVTTPL------FADEVKA------AGAEVVLYKSE-FDTFHV 66 (402)
T ss_dssp CCCCEEEEECCSSHHHHHHHHHHHHHHHHTT--CEEEEEECHH------HHHHHHH------TTCEEEECCCG-GGTSSS
T ss_pred CCCCEEEEEeCCCCcccccHHHHHHHHHhCC--CEEEEEcCHH------HHHHHHH------cCCEEEecccc-cccccc
Confidence 655 999999999999999999999999999 9999997532 1122222 27888888754 2211
Q ss_pred ---CC--ChhHHHHH-HHHH---hhHHHHHHHHhhhcCCCccEEEe-----cCcHHHhhhCCCCeEEEecchhHHHHHHH
Q 044031 78 ---TL--SRADIAIE-SIKL---NSSNVFQALENISLTSKILSFII-----TSTTSFSYHPNIPTYTYFNSCASTLAAIL 143 (468)
Q Consensus 78 ---~~--~~~~~~~~-~~~~---~~~~l~~ll~~~~~~~~pD~vI~-----~~~~~vA~~lgIP~i~~~~~~~~~~~~~~ 143 (468)
.. .....+.. .... ....+.+.+++ .+||+||+ .++..+|+++|||++.+.+.........
T Consensus 67 ~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~----~~pD~Vi~d~~~~~~~~~aA~~~giP~v~~~~~~~~~~~~~- 141 (402)
T 3ia7_A 67 PEVVKQEDAETQLHLVYVRENVAILRAAEEALGD----NPPDLVVYDVFPFIAGRLLAARWDRPAVRLTGGFAANEHYS- 141 (402)
T ss_dssp SSSSCCTTHHHHHHHHHHHHHHHHHHHHHHHHTT----CCCSEEEEESTTHHHHHHHHHHHTCCEEEEESSCCCBTTBC-
T ss_pred cccccccchHHHHHHHHHHHHHHHHHHHHHHHhc----cCCCEEEECchHHHHHHHHHHhhCCCEEEEecccccCcccc-
Confidence 01 11111111 1221 22333333333 49999998 4466688999999998764322110000
Q ss_pred hhhhhhhcccCCCCCCCCccccCCCCCCCCCCCCCccccCCCchhHHHHHHHh-------hhhcc-cceEEecChhhhhH
Q 044031 144 YLPTLHNQITSSFKDHPSSLLFIPGLPPVKSSFMPEPVLDRQKPIYDFFLNYS-------TSLSK-SNGIIINTFDFLEQ 215 (468)
Q Consensus 144 ~~p~~~~~~~~~~~~~~~~~~~~pg~~~~~~~~l~~~~~~~~~~~~~~~~~~~-------~~~~~-~~~~l~~s~~~le~ 215 (468)
..+.+... .... .+.... ......+.+.... ..... .+..+...-..++.
T Consensus 142 ~~~~~~~~--------------~~~~-------~~~~~~-~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~l~~~~~~~~~ 199 (402)
T 3ia7_A 142 LFKELWKS--------------NGQR-------HPADVE-AVHSVLVDLLGKYGVDTPVKEYWDEIEGLTIVFLPKSFQP 199 (402)
T ss_dssp HHHHHHHH--------------HTCC-------CGGGSH-HHHHHHHHHHHTTTCCSCHHHHHTCCCSCEEESSCGGGST
T ss_pred cccccccc--------------cccc-------ChhhHH-HHHHHHHHHHHHcCCCCChhhhhcCCCCeEEEEcChHhCC
Confidence 00000000 0000 000000 0000000000000 00000 13333333333321
Q ss_pred HHHHHHHcCcccCCCCCCCeeEecccccCCcCCCCCCCCCCcchhHHhhcCCCCCceEEeccCCCcCCCHHHHHHHHHHH
Q 044031 216 QAIKAIVNGDCVTNGTTPPLHCIGPLIVDAKDRAGGVSDDVSSDCLTWLDSQPSGSVVFLCFGSRGTFSAPQLKEIAIGL 295 (468)
Q Consensus 216 ~~~~~~~~~~~~~~~~~p~~~~VGpl~~~~~~~~~~~~~~~~~~l~~~l~~~~~~~~v~vs~GS~~~~~~~~~~~~~~al 295 (468)
. ... ...+++++||+..... +...|+...+++++|||++||......+.+..+++++
T Consensus 200 ~-----~~~------~~~~~~~vGp~~~~~~------------~~~~~~~~~~~~~~v~v~~G~~~~~~~~~~~~~~~~~ 256 (402)
T 3ia7_A 200 F-----AET------FDERFAFVGPTLTGRD------------GQPGWQPPRPDAPVLLVSLGNQFNEHPEFFRACAQAF 256 (402)
T ss_dssp T-----GGG------CCTTEEECCCCCCC----------------CCCCCSSTTCCEEEEECCSCSSCCHHHHHHHHHHH
T ss_pred c-----ccc------CCCCeEEeCCCCCCcc------------cCCCCcccCCCCCEEEEECCCCCcchHHHHHHHHHHH
Confidence 1 011 1256999999875432 1122444445667999999999877777888899999
Q ss_pred HhCCCcEEEEEeCCCCccccCCChhHHhhccCCCeEecCCCCHHhhhCccCcceEEecCCcchHHHHHHhCCcEEeccc-
Q 044031 296 ERSNQRFLWVVRNPSNAAEAELPEGFLERTKERGLVVKSWAPQSTILGHESVGGFVTHCGWSSVVEAVTYGVPMIAWPL- 374 (468)
Q Consensus 296 ~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~pq~~il~~~~~~~~ithgG~~s~~eal~~GvP~v~~P~- 374 (468)
+..+.+++|.++...+ .+.+. ..+.|+.+.+|+|+.++|+++++ ||||||+||++|++++|+|+|++|.
T Consensus 257 ~~~~~~~~~~~g~~~~------~~~~~--~~~~~v~~~~~~~~~~ll~~ad~--~v~~~G~~t~~Ea~~~G~P~v~~p~~ 326 (402)
T 3ia7_A 257 ADTPWHVVMAIGGFLD------PAVLG--PLPPNVEAHQWIPFHSVLAHARA--CLTHGTTGAVLEAFAAGVPLVLVPHF 326 (402)
T ss_dssp TTSSCEEEEECCTTSC------GGGGC--SCCTTEEEESCCCHHHHHTTEEE--EEECCCHHHHHHHHHTTCCEEECGGG
T ss_pred hcCCcEEEEEeCCcCC------hhhhC--CCCCcEEEecCCCHHHHHhhCCE--EEECCCHHHHHHHHHhCCCEEEeCCC
Confidence 9889999998886411 01111 12458888899999999999988 9999999999999999999999999
Q ss_pred ccchhhHHHHHHhhcceeeeeccCCcccccCCCCccccHHHHHHHHHHHhcCchhHHHHHHHHHHHHHHHHhhcCCCCCC
Q 044031 375 YAEQFLNSVALVQEMKVAMPMFLNGEEETIGNGEGVVSAERVEERVRELMMGSEGKALRERSLEMRMMAATAWNNNDGGS 454 (468)
Q Consensus 375 ~~DQ~~na~~~~~~~g~g~~~~~~~~~~~~~~~~~~~~~~~l~~av~~~l~~~~~~~~~~~a~~l~~~~~~a~~~~~~g~ 454 (468)
..||+.||+++++ .|+|+.+.. .+ ++.+.|.++|+++|+|+ +++++++++++.+.+ .++
T Consensus 327 ~~~q~~~a~~~~~-~g~g~~~~~--------~~---~~~~~l~~~~~~ll~~~---~~~~~~~~~~~~~~~------~~~ 385 (402)
T 3ia7_A 327 ATEAAPSAERVIE-LGLGSVLRP--------DQ---LEPASIREAVERLAADS---AVRERVRRMQRDILS------SGG 385 (402)
T ss_dssp CGGGHHHHHHHHH-TTSEEECCG--------GG---CSHHHHHHHHHHHHHCH---HHHHHHHHHHHHHHT------SCH
T ss_pred cccHHHHHHHHHH-cCCEEEccC--------CC---CCHHHHHHHHHHHHcCH---HHHHHHHHHHHHHhh------CCh
Confidence 9999999999975 499999974 34 79999999999999999 899999888887654 344
Q ss_pred hHHHHHHHHH
Q 044031 455 SFTAFSNLFD 464 (468)
Q Consensus 455 ~~~~~~~~~~ 464 (468)
+...++.+.+
T Consensus 386 ~~~~~~~i~~ 395 (402)
T 3ia7_A 386 PARAADEVEA 395 (402)
T ss_dssp HHHHHHHHHH
T ss_pred HHHHHHHHHH
Confidence 5555554443
No 13
>2iyf_A OLED, oleandomycin glycosyltransferase; antibiotic resistance, glycosylation, enzyme, macrolide, carbohydrate; HET: ERY UDP; 1.7A {Streptomyces antibioticus}
Probab=100.00 E-value=2e-34 Score=288.53 Aligned_cols=352 Identities=15% Similarity=0.137 Sum_probs=226.6
Q ss_pred ceEEEecCCCccCHHHHHHHHHHHHhCCCCcEEEEEeCCCCCCchhhhhhhhccccCCCCCeeEEEcCCCCCCCCCC---
Q 044031 3 KTIALYPGPAFHHMISMVELGKLILQHRSDVSITILVPSMPLEESKTCSYINSISHRLNPIISFYYLPAIQMPSETL--- 79 (468)
Q Consensus 3 ~~Iv~~~~~~~GHv~P~l~LA~~L~~~G~~h~Vt~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~i~~~~lp~~~~--- 79 (468)
+||+++++++.||++|++.||++|+++| |+|+++++..... .+ ...+++++.++.. .+....
T Consensus 8 ~kIl~~~~~~~Gh~~p~~~la~~L~~~G--~~V~~~~~~~~~~------~~------~~~g~~~~~~~~~-~~~~~~~~~ 72 (430)
T 2iyf_A 8 AHIAMFSIAAHGHVNPSLEVIRELVARG--HRVTYAIPPVFAD------KV------AATGPRPVLYHST-LPGPDADPE 72 (430)
T ss_dssp CEEEEECCSCHHHHGGGHHHHHHHHHTT--CEEEEEECGGGHH------HH------HTTSCEEEECCCC-SCCTTSCGG
T ss_pred ceEEEEeCCCCccccchHHHHHHHHHCC--CeEEEEeCHHHHH------HH------HhCCCEEEEcCCc-Ccccccccc
Confidence 5999999999999999999999999999 9999997654211 11 2237888888764 332211
Q ss_pred ----ChhHHHH---HHHHHhhHHHHHHHHhhhcCCCccEEEe----cCcHHHhhhCCCCeEEEecchhHHHHHHHhhh-h
Q 044031 80 ----SRADIAI---ESIKLNSSNVFQALENISLTSKILSFII----TSTTSFSYHPNIPTYTYFNSCASTLAAILYLP-T 147 (468)
Q Consensus 80 ----~~~~~~~---~~~~~~~~~l~~ll~~~~~~~~pD~vI~----~~~~~vA~~lgIP~i~~~~~~~~~~~~~~~~p-~ 147 (468)
.....+. .........+.+++++ .+||+||+ .++..+|+++|||++.+++...........+. .
T Consensus 73 ~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~----~~pD~Vi~d~~~~~~~~~A~~~giP~v~~~~~~~~~~~~~~~~~~~ 148 (430)
T 2iyf_A 73 AWGSTLLDNVEPFLNDAIQALPQLADAYAD----DIPDLVLHDITSYPARVLARRWGVPAVSLSPNLVAWKGYEEEVAEP 148 (430)
T ss_dssp GGCSSHHHHHHHHHHHHHHHHHHHHHHHTT----SCCSEEEEETTCHHHHHHHHHHTCCEEEEESSCCCCTTHHHHTHHH
T ss_pred ccchhhHHHHHHHHHHHHHHHHHHHHHhhc----cCCCEEEECCccHHHHHHHHHcCCCEEEEecccccccccccccccc
Confidence 1111111 1112223334444444 49999999 34667899999999998865431100000000 0
Q ss_pred hhhcccCCCCCCCCccccCCCCCCCCCCCCCccccCCCchhHHHHHHH-------hhhhcccceEEecChhhhhHHHHHH
Q 044031 148 LHNQITSSFKDHPSSLLFIPGLPPVKSSFMPEPVLDRQKPIYDFFLNY-------STSLSKSNGIIINTFDFLEQQAIKA 220 (468)
Q Consensus 148 ~~~~~~~~~~~~~~~~~~~pg~~~~~~~~l~~~~~~~~~~~~~~~~~~-------~~~~~~~~~~l~~s~~~le~~~~~~ 220 (468)
.... ....++.. .+. .....+.+. .......+.++.++...++...
T Consensus 149 ~~~~-----------~~~~~~~~---------~~~----~~~~~~~~~~g~~~~~~~~~~~~~~~l~~~~~~~~~~~--- 201 (430)
T 2iyf_A 149 MWRE-----------PRQTERGR---------AYY----ARFEAWLKENGITEHPDTFASHPPRSLVLIPKALQPHA--- 201 (430)
T ss_dssp HHHH-----------HHHSHHHH---------HHH----HHHHHHHHHTTCCSCHHHHHHCCSSEEECSCGGGSTTG---
T ss_pred hhhh-----------hccchHHH---------HHH----HHHHHHHHHhCCCCCHHHHhcCCCcEEEeCcHHhCCCc---
Confidence 0000 00000000 000 000000000 0011134667888877766431
Q ss_pred HHcCcccCCCCCCC-eeEecccccCCcCCCCCCCCCCcchhHHhhcCCCCCceEEeccCCCcCCCHHHHHHHHHHHHhC-
Q 044031 221 IVNGDCVTNGTTPP-LHCIGPLIVDAKDRAGGVSDDVSSDCLTWLDSQPSGSVVFLCFGSRGTFSAPQLKEIAIGLERS- 298 (468)
Q Consensus 221 ~~~~~~~~~~~~p~-~~~VGpl~~~~~~~~~~~~~~~~~~l~~~l~~~~~~~~v~vs~GS~~~~~~~~~~~~~~al~~~- 298 (468)
..+ .++ +++|||++.... . ..+|.+..+++++|||++||+.....+.+.+++++++..
T Consensus 202 --~~~------~~~~v~~vG~~~~~~~--~----------~~~~~~~~~~~~~v~v~~Gs~~~~~~~~~~~~~~~l~~~~ 261 (430)
T 2iyf_A 202 --DRV------DEDVYTFVGACQGDRA--E----------EGGWQRPAGAEKVVLVSLGSAFTKQPAFYRECVRAFGNLP 261 (430)
T ss_dssp --GGS------CTTTEEECCCCC-----------------CCCCCCCTTCSEEEEEECTTTCC-CHHHHHHHHHHHTTCT
T ss_pred --ccC------CCccEEEeCCcCCCCC--C----------CCCCccccCCCCeEEEEcCCCCCCcHHHHHHHHHHHhcCC
Confidence 111 246 999998664321 0 113544444567999999999855567788899999885
Q ss_pred CCcEEEEEeCCCCccccCCChhHHhhccCCCeEecCCCCHHhhhCccCcceEEecCCcchHHHHHHhCCcEEecccccch
Q 044031 299 NQRFLWVVRNPSNAAEAELPEGFLERTKERGLVVKSWAPQSTILGHESVGGFVTHCGWSSVVEAVTYGVPMIAWPLYAEQ 378 (468)
Q Consensus 299 ~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~pq~~il~~~~~~~~ithgG~~s~~eal~~GvP~v~~P~~~DQ 378 (468)
+.+++|.+|...+ . +.+. . .+.|+.+.+|+||.++|+++++ ||||||+||++||+++|+|+|++|..+||
T Consensus 262 ~~~~~~~~G~~~~--~----~~l~-~-~~~~v~~~~~~~~~~~l~~ad~--~v~~~G~~t~~Ea~~~G~P~i~~p~~~~q 331 (430)
T 2iyf_A 262 GWHLVLQIGRKVT--P----AELG-E-LPDNVEVHDWVPQLAILRQADL--FVTHAGAGGSQEGLATATPMIAVPQAVDQ 331 (430)
T ss_dssp TEEEEEECC---C--G----GGGC-S-CCTTEEEESSCCHHHHHTTCSE--EEECCCHHHHHHHHHTTCCEEECCCSHHH
T ss_pred CeEEEEEeCCCCC--h----HHhc-c-CCCCeEEEecCCHHHHhhccCE--EEECCCccHHHHHHHhCCCEEECCCccch
Confidence 8899998886411 0 1111 1 2457888899999999999998 99999999999999999999999999999
Q ss_pred hhHHHHHHhhcceeeeeccCCcccccCCCCccccHHHHHHHHHHHhcCchhHHHHHHHHHHHHHHHH
Q 044031 379 FLNSVALVQEMKVAMPMFLNGEEETIGNGEGVVSAERVEERVRELMMGSEGKALRERSLEMRMMAAT 445 (468)
Q Consensus 379 ~~na~~~~~~~g~g~~~~~~~~~~~~~~~~~~~~~~~l~~av~~~l~~~~~~~~~~~a~~l~~~~~~ 445 (468)
+.|++++++ .|+|+.+.. ++ ++.++|.++|+++|+|+ ++++++.++++.+++
T Consensus 332 ~~~a~~~~~-~g~g~~~~~--------~~---~~~~~l~~~i~~ll~~~---~~~~~~~~~~~~~~~ 383 (430)
T 2iyf_A 332 FGNADMLQG-LGVARKLAT--------EE---ATADLLRETALALVDDP---EVARRLRRIQAEMAQ 383 (430)
T ss_dssp HHHHHHHHH-TTSEEECCC--------C----CCHHHHHHHHHHHHHCH---HHHHHHHHHHHHHHH
T ss_pred HHHHHHHHH-cCCEEEcCC--------CC---CCHHHHHHHHHHHHcCH---HHHHHHHHHHHHHHh
Confidence 999999975 599999874 45 79999999999999998 788888887777665
No 14
>2p6p_A Glycosyl transferase; X-RAY-diffraction,urdamycina-biosynthesis; 1.88A {Streptomyces fradiae}
Probab=100.00 E-value=8.1e-34 Score=279.77 Aligned_cols=346 Identities=12% Similarity=0.085 Sum_probs=227.4
Q ss_pred eEEEecCCCccCHHHHHHHHHHHHhCCCCcEEEEEeCCCCCCchhhhhhhhccccCCCCCeeEEEcCCCC----------
Q 044031 4 TIALYPGPAFHHMISMVELGKLILQHRSDVSITILVPSMPLEESKTCSYINSISHRLNPIISFYYLPAIQ---------- 73 (468)
Q Consensus 4 ~Iv~~~~~~~GHv~P~l~LA~~L~~~G~~h~Vt~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~i~~~~---------- 73 (468)
||++++.++.||++|+++||++|+++| |+|+++++... ...+.. .+++++.++...
T Consensus 2 rIl~~~~~~~Gh~~p~~~la~~L~~~G--h~V~~~~~~~~------~~~~~~------~g~~~~~~~~~~~~~~~~~~~~ 67 (384)
T 2p6p_A 2 RILFVAAGSPATVFALAPLATAARNAG--HQVVMAANQDM------GPVVTG------VGLPAVATTDLPIRHFITTDRE 67 (384)
T ss_dssp EEEEECCSSHHHHHHHHHHHHHHHHTT--CEEEEEECGGG------HHHHHH------TTCCEEESCSSCHHHHHHBCTT
T ss_pred EEEEEeCCccchHhHHHHHHHHHHHCC--CEEEEEeCHHH------HHHHHh------CCCEEEEeCCcchHHHHhhhcc
Confidence 699999999999999999999999999 99999976431 111211 267788776541
Q ss_pred -CCCCCCCh-hHH--H-HH----HHHHhhHHHHHHHHhhhcCCCccEEEe----cCcHHHhhhCCCCeEEEecchhHHHH
Q 044031 74 -MPSETLSR-ADI--A-IE----SIKLNSSNVFQALENISLTSKILSFII----TSTTSFSYHPNIPTYTYFNSCASTLA 140 (468)
Q Consensus 74 -lp~~~~~~-~~~--~-~~----~~~~~~~~l~~ll~~~~~~~~pD~vI~----~~~~~vA~~lgIP~i~~~~~~~~~~~ 140 (468)
++...... ... + .. ........+.+++++. +||+||+ .++..+|+++|||++.+...+..
T Consensus 68 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~----~pD~Vi~~~~~~~~~~~a~~~giP~v~~~~~~~~--- 140 (384)
T 2p6p_A 68 GRPEAIPSDPVAQARFTGRWFARMAASSLPRMLDFSRAW----RPDLIVGGTMSYVAPLLALHLGVPHARQTWDAVD--- 140 (384)
T ss_dssp SCBCCCCCSHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH----CCSEEEEETTCTHHHHHHHHHTCCEEEECCSSCC---
T ss_pred cCccccCcchHHHHHHHHHHHHhhHHHHHHHHHHHHhcc----CCcEEEECcchhhHHHHHHhcCCCEEEeccCCcc---
Confidence 11111011 111 1 11 1112234455555555 9999999 45666899999999987542210
Q ss_pred HHHhhhhhhhcccCCCCCCCCccccCCCCCCCCCCCCCccccCCCchhHHHHHHHhhh--hcccceEEecChhhhhHHHH
Q 044031 141 AILYLPTLHNQITSSFKDHPSSLLFIPGLPPVKSSFMPEPVLDRQKPIYDFFLNYSTS--LSKSNGIIINTFDFLEQQAI 218 (468)
Q Consensus 141 ~~~~~p~~~~~~~~~~~~~~~~~~~~pg~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~--~~~~~~~l~~s~~~le~~~~ 218 (468)
..+ +...+ ....+.+.+.... ....+.++.++...++...
T Consensus 141 -------------------------~~~--------~~~~~----~~~~~~~~~~~g~~~~~~~~~~l~~~~~~~~~~~- 182 (384)
T 2p6p_A 141 -------------------------ADG--------IHPGA----DAELRPELSELGLERLPAPDLFIDICPPSLRPAN- 182 (384)
T ss_dssp -------------------------CTT--------THHHH----HHHTHHHHHHTTCSSCCCCSEEEECSCGGGSCTT-
T ss_pred -------------------------cch--------hhHHH----HHHHHHHHHHcCCCCCCCCCeEEEECCHHHCCCC-
Confidence 000 00000 0000011111000 0013456777766655321
Q ss_pred HHHHcCcccCCCCCCCeeEecccccCCcCCCCCCCCCCcchhHHhhcCCCCCceEEeccCCCcCC-----CHHHHHHHHH
Q 044031 219 KAIVNGDCVTNGTTPPLHCIGPLIVDAKDRAGGVSDDVSSDCLTWLDSQPSGSVVFLCFGSRGTF-----SAPQLKEIAI 293 (468)
Q Consensus 219 ~~~~~~~~~~~~~~p~~~~VGpl~~~~~~~~~~~~~~~~~~l~~~l~~~~~~~~v~vs~GS~~~~-----~~~~~~~~~~ 293 (468)
. . ++ .++.+++. . .+.++.+|++..+++++|||++||+... ..+.+..+++
T Consensus 183 ----~-~--~~---~~~~~~~~---~-----------~~~~~~~~l~~~~~~~~v~v~~Gs~~~~~~~~~~~~~~~~~~~ 238 (384)
T 2p6p_A 183 ----A-A--PA---RMMRHVAT---S-----------RQCPLEPWMYTRDTRQRVLVTSGSRVAKESYDRNFDFLRGLAK 238 (384)
T ss_dssp ----S-C--CC---EECCCCCC---C-----------CCCBCCHHHHCCCSSCEEEEECSSSSSCCSSCCCCTTHHHHHH
T ss_pred ----C-C--CC---CceEecCC---C-----------CCCCCCchhhcCCCCCEEEEECCCCCccccccccHHHHHHHHH
Confidence 0 0 00 12333321 0 1224567887655567999999999764 4467888999
Q ss_pred HHHhCCCcEEEEEeCCCCccccCCChhHHhhccCCCeEecCCCCHHhhhCccCcceEEecCCcchHHHHHHhCCcEEecc
Q 044031 294 GLERSNQRFLWVVRNPSNAAEAELPEGFLERTKERGLVVKSWAPQSTILGHESVGGFVTHCGWSSVVEAVTYGVPMIAWP 373 (468)
Q Consensus 294 al~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~pq~~il~~~~~~~~ithgG~~s~~eal~~GvP~v~~P 373 (468)
+|+..+++++|++++. + .+.+.. .++|+.+ +|+||.++|+++++ ||||||+||++||+++|+|+|++|
T Consensus 239 al~~~~~~~~~~~g~~---~----~~~l~~--~~~~v~~-~~~~~~~~l~~~d~--~v~~~G~~t~~Ea~~~G~P~v~~p 306 (384)
T 2p6p_A 239 DLVRWDVELIVAAPDT---V----AEALRA--EVPQARV-GWTPLDVVAPTCDL--LVHHAGGVSTLTGLSAGVPQLLIP 306 (384)
T ss_dssp HHHTTTCEEEEECCHH---H----HHHHHH--HCTTSEE-ECCCHHHHGGGCSE--EEECSCTTHHHHHHHTTCCEEECC
T ss_pred HHhcCCcEEEEEeCCC---C----HHhhCC--CCCceEE-cCCCHHHHHhhCCE--EEeCCcHHHHHHHHHhCCCEEEcc
Confidence 9999999999988742 0 011111 2568889 99999999988777 999999999999999999999999
Q ss_pred cccchhhHHHHHHhhcceeeeeccCCcccccCCCCccccHHHHHHHHHHHhcCchhHHHHHHHHHHHHHHHHhhcCCCCC
Q 044031 374 LYAEQFLNSVALVQEMKVAMPMFLNGEEETIGNGEGVVSAERVEERVRELMMGSEGKALRERSLEMRMMAATAWNNNDGG 453 (468)
Q Consensus 374 ~~~DQ~~na~~~~~~~g~g~~~~~~~~~~~~~~~~~~~~~~~l~~av~~~l~~~~~~~~~~~a~~l~~~~~~a~~~~~~g 453 (468)
...||+.||+++++ .|+|+.+.. .+ ++.++|.++|+++|+|+ +++++++++++.++. . .
T Consensus 307 ~~~dq~~~a~~~~~-~g~g~~~~~--------~~---~~~~~l~~~i~~ll~~~---~~~~~~~~~~~~~~~-----~-~ 365 (384)
T 2p6p_A 307 KGSVLEAPARRVAD-YGAAIALLP--------GE---DSTEAIADSCQELQAKD---TYARRAQDLSREISG-----M-P 365 (384)
T ss_dssp CSHHHHHHHHHHHH-HTSEEECCT--------TC---CCHHHHHHHHHHHHHCH---HHHHHHHHHHHHHHT-----S-C
T ss_pred CcccchHHHHHHHH-CCCeEecCc--------CC---CCHHHHHHHHHHHHcCH---HHHHHHHHHHHHHHh-----C-C
Confidence 99999999999975 599999874 45 79999999999999998 899999999988775 2 3
Q ss_pred ChHHHHHHHHHH
Q 044031 454 SSFTAFSNLFDL 465 (468)
Q Consensus 454 ~~~~~~~~~~~~ 465 (468)
+....++.+.+.
T Consensus 366 ~~~~~~~~i~~~ 377 (384)
T 2p6p_A 366 LPATVVTALEQL 377 (384)
T ss_dssp CHHHHHHHHHHH
T ss_pred CHHHHHHHHHHH
Confidence 445555554443
No 15
>2yjn_A ERYCIII, glycosyltransferase; transferase, cytochrome P450; 3.09A {Saccharopolyspora erythraea}
Probab=100.00 E-value=1.2e-33 Score=283.69 Aligned_cols=347 Identities=11% Similarity=0.045 Sum_probs=215.1
Q ss_pred ceEEEecCCCccCHHHHHHHHHHHHhCCCCcEEEEEeCCCCCCchhhhhhhhccccCCCCCeeEEEcCCCC----CCCC-
Q 044031 3 KTIALYPGPAFHHMISMVELGKLILQHRSDVSITILVPSMPLEESKTCSYINSISHRLNPIISFYYLPAIQ----MPSE- 77 (468)
Q Consensus 3 ~~Iv~~~~~~~GHv~P~l~LA~~L~~~G~~h~Vt~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~i~~~~----lp~~- 77 (468)
+||+++++++.||++|+++||++|+++| |+|+|+++... ...+ ...+++|+.++... +...
T Consensus 21 mrIl~~~~~~~GHv~p~l~la~~L~~~G--heV~~~~~~~~------~~~v------~~~G~~~~~i~~~~~~~~~~~~~ 86 (441)
T 2yjn_A 21 MRVVFSSMASKSHLFGLVPLAWAFRAAG--HEVRVVASPAL------TEDI------TAAGLTAVPVGTDVDLVDFMTHA 86 (441)
T ss_dssp CEEEEECCSCHHHHTTTHHHHHHHHHTT--CEEEEEECGGG------HHHH------HTTTCCEEECSCCCCHHHHHHHT
T ss_pred cEEEEEcCCCcchHhHHHHHHHHHHHCC--CeEEEEeCchh------HHHH------HhCCCceeecCCccchHHHhhhh
Confidence 6899999999999999999999999999 99999976432 1122 22378888887651 0000
Q ss_pred ----------CC-----Ch---hHHH---HHHHH---------H-hhHHHHHHHHhhhcCCCccEEEe----cCcHHHhh
Q 044031 78 ----------TL-----SR---ADIA---IESIK---------L-NSSNVFQALENISLTSKILSFII----TSTTSFSY 122 (468)
Q Consensus 78 ----------~~-----~~---~~~~---~~~~~---------~-~~~~l~~ll~~~~~~~~pD~vI~----~~~~~vA~ 122 (468)
.. .. ...+ ...+. . ....+.++++++ +||+||+ .++..+|+
T Consensus 87 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~----~pDlVv~d~~~~~~~~aA~ 162 (441)
T 2yjn_A 87 GHDIIDYVRSLDFSERDPATLTWEHLLGMQTVLTPTFYALMSPDTLIEGMVSFCRKW----RPDLVIWEPLTFAAPIAAA 162 (441)
T ss_dssp THHHHHHHTTCCCTTCCGGGGSHHHHHHHHHHHHHHTTTTSSCHHHHHHHHHHHHHH----CCSEEEECTTCTHHHHHHH
T ss_pred hcccccccccccccccCcchhhhhhhhhHHHHHHHHHHhhcchHHHHHHHHHHHHhc----CCCEEEecCcchhHHHHHH
Confidence 00 00 0000 01111 1 233344444555 9999999 45667899
Q ss_pred hCCCCeEEEecchhHHHHHHHhhhhhhhcccCCCCCCCCccccCCCCCCCCCCCCCccccCCCchhHHHHHHHhhhhc--
Q 044031 123 HPNIPTYTYFNSCASTLAAILYLPTLHNQITSSFKDHPSSLLFIPGLPPVKSSFMPEPVLDRQKPIYDFFLNYSTSLS-- 200 (468)
Q Consensus 123 ~lgIP~i~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~pg~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~-- 200 (468)
++|||++.+...+............... ..|.. . + .....+.+.+....+.
T Consensus 163 ~lgiP~v~~~~~~~~~~~~~~~~~~~~~--------------~~~~~---~-------~---~~~~~~~l~~~~~~~g~~ 215 (441)
T 2yjn_A 163 VTGTPHARLLWGPDITTRARQNFLGLLP--------------DQPEE---H-------R---EDPLAEWLTWTLEKYGGP 215 (441)
T ss_dssp HHTCCEEEECSSCCHHHHHHHHHHHHGG--------------GSCTT---T-------C---CCHHHHHHHHHHHHTTCC
T ss_pred HcCCCEEEEecCCCcchhhhhhhhhhcc--------------ccccc---c-------c---cchHHHHHHHHHHHcCCC
Confidence 9999999986554332111100000000 00000 0 0 0111111111111110
Q ss_pred -------ccceEEecChhhhhHHHHHHHHcCcccCCCCCCCeeEecccccCCcCCCCCCCCCCcchhHHhhcCCCCCceE
Q 044031 201 -------KSNGIIINTFDFLEQQAIKAIVNGDCVTNGTTPPLHCIGPLIVDAKDRAGGVSDDVSSDCLTWLDSQPSGSVV 273 (468)
Q Consensus 201 -------~~~~~l~~s~~~le~~~~~~~~~~~~~~~~~~p~~~~VGpl~~~~~~~~~~~~~~~~~~l~~~l~~~~~~~~v 273 (468)
..+..+..+.+.++.+ . .++. ..+++.... .+.++.+|++..+++++|
T Consensus 216 ~~~~~~~~~~~~l~~~~~~~~~~------------~-~~~~-~~~~~~~~~-----------~~~~~~~~l~~~~~~~~v 270 (441)
T 2yjn_A 216 AFDEEVVVGQWTIDPAPAAIRLD------------T-GLKT-VGMRYVDYN-----------GPSVVPEWLHDEPERRRV 270 (441)
T ss_dssp CCCGGGTSCSSEEECSCGGGSCC------------C-CCCE-EECCCCCCC-----------SSCCCCGGGSSCCSSCEE
T ss_pred CCCccccCCCeEEEecCccccCC------------C-CCCC-CceeeeCCC-----------CCcccchHhhcCCCCCEE
Confidence 0111222222222110 0 0010 112221100 123456798866666799
Q ss_pred EeccCCCcCC---CHHHHHHHHHHHHhCCCcEEEEEeCCCCccccCCChhHHhhccCCCeEecCCCCHHhhhCccCcceE
Q 044031 274 FLCFGSRGTF---SAPQLKEIAIGLERSNQRFLWVVRNPSNAAEAELPEGFLERTKERGLVVKSWAPQSTILGHESVGGF 350 (468)
Q Consensus 274 ~vs~GS~~~~---~~~~~~~~~~al~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~pq~~il~~~~~~~~ 350 (468)
||++||+... ..+.+..++++++..++++||++++.. .+.+. ..++|+.+.+|+||.++|+++++ |
T Consensus 271 ~v~~Gs~~~~~~~~~~~~~~~~~al~~~~~~~v~~~g~~~---~~~l~------~~~~~v~~~~~~~~~~ll~~ad~--~ 339 (441)
T 2yjn_A 271 CLTLGISSRENSIGQVSIEELLGAVGDVDAEIIATFDAQQ---LEGVA------NIPDNVRTVGFVPMHALLPTCAA--T 339 (441)
T ss_dssp EEEC----------CCSTTTTHHHHHTSSSEEEECCCTTT---TSSCS------SCCSSEEECCSCCHHHHGGGCSE--E
T ss_pred EEECCCCcccccChHHHHHHHHHHHHcCCCEEEEEECCcc---hhhhc------cCCCCEEEecCCCHHHHHhhCCE--E
Confidence 9999999753 234567788999888999999988641 11111 12458889999999999987777 9
Q ss_pred EecCCcchHHHHHHhCCcEEecccccchhhHHHHHHhhcceeeeeccCCcccccCCCCccccHHHHHHHHHHHhcCchhH
Q 044031 351 VTHCGWSSVVEAVTYGVPMIAWPLYAEQFLNSVALVQEMKVAMPMFLNGEEETIGNGEGVVSAERVEERVRELMMGSEGK 430 (468)
Q Consensus 351 ithgG~~s~~eal~~GvP~v~~P~~~DQ~~na~~~~~~~g~g~~~~~~~~~~~~~~~~~~~~~~~l~~av~~~l~~~~~~ 430 (468)
|||||+||++|++++|||+|++|+..||+.||+++++ .|+|+.+.. ++ ++.++|.++|+++|+|+
T Consensus 340 V~~~G~~t~~Ea~~~G~P~i~~p~~~dQ~~na~~l~~-~g~g~~~~~--------~~---~~~~~l~~~i~~ll~~~--- 404 (441)
T 2yjn_A 340 VHHGGPGSWHTAAIHGVPQVILPDGWDTGVRAQRTQE-FGAGIALPV--------PE---LTPDQLRESVKRVLDDP--- 404 (441)
T ss_dssp EECCCHHHHHHHHHTTCCEEECCCSHHHHHHHHHHHH-HTSEEECCT--------TT---CCHHHHHHHHHHHHHCH---
T ss_pred EECCCHHHHHHHHHhCCCEEEeCCcccHHHHHHHHHH-cCCEEEccc--------cc---CCHHHHHHHHHHHhcCH---
Confidence 9999999999999999999999999999999999975 599999874 45 89999999999999998
Q ss_pred HHHHHHHHHHHHHHH
Q 044031 431 ALRERSLEMRMMAAT 445 (468)
Q Consensus 431 ~~~~~a~~l~~~~~~ 445 (468)
+++++++++++.+++
T Consensus 405 ~~~~~~~~~~~~~~~ 419 (441)
T 2yjn_A 405 AHRAGAARMRDDMLA 419 (441)
T ss_dssp HHHHHHHHHHHHHHT
T ss_pred HHHHHHHHHHHHHHc
Confidence 899999998887765
No 16
>3s2u_A UDP-N-acetylglucosamine--N-acetylmuramyl-(pentape pyrophosphoryl-undecaprenol N-acetylglucosamine...; N-acetylglucosaminyl transferase; HET: UD1; 2.23A {Pseudomonas aeruginosa}
Probab=100.00 E-value=1.5e-31 Score=260.93 Aligned_cols=319 Identities=12% Similarity=0.094 Sum_probs=199.8
Q ss_pred CcceEEEecCCCccCHHHHHHHHHHHHhCCCCcEEEEEeCCCCCCchhhhhhhhccccCCCCCeeEEEcCCCCCCCCCCC
Q 044031 1 MKKTIALYPGPAFHHMISMVELGKLILQHRSDVSITILVPSMPLEESKTCSYINSISHRLNPIISFYYLPAIQMPSETLS 80 (468)
Q Consensus 1 m~~~Iv~~~~~~~GHv~P~l~LA~~L~~~G~~h~Vt~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~i~~~~lp~~~~~ 80 (468)
||++|++...|+.||++|+++||++|+++| |+|+|++.....+.. .++. .++++..++...++....
T Consensus 1 M~~~i~i~~GGTgGHi~palala~~L~~~g--~~V~~vg~~~g~e~~----~v~~------~g~~~~~i~~~~~~~~~~- 67 (365)
T 3s2u_A 1 MKGNVLIMAGGTGGHVFPALACAREFQARG--YAVHWLGTPRGIEND----LVPK------AGLPLHLIQVSGLRGKGL- 67 (365)
T ss_dssp --CEEEEECCSSHHHHHHHHHHHHHHHHTT--CEEEEEECSSSTHHH----HTGG------GTCCEEECC----------
T ss_pred CCCcEEEEcCCCHHHHHHHHHHHHHHHhCC--CEEEEEECCchHhhc----hhhh------cCCcEEEEECCCcCCCCH-
Confidence 999999999999999999999999999999 999999865443322 2222 277888887554432110
Q ss_pred hhHH-HHHHHHHhhHHHHHHHHhhhcCCCccEEEe---c---CcHHHhhhCCCCeEEEecchhHHHHHHHhhhhhhhccc
Q 044031 81 RADI-AIESIKLNSSNVFQALENISLTSKILSFII---T---STTSFSYHPNIPTYTYFNSCASTLAAILYLPTLHNQIT 153 (468)
Q Consensus 81 ~~~~-~~~~~~~~~~~l~~ll~~~~~~~~pD~vI~---~---~~~~vA~~lgIP~i~~~~~~~~~~~~~~~~p~~~~~~~ 153 (468)
...+ ....+.........+++++ +||+||+ + ++..+|+.+|||++++-.
T Consensus 68 ~~~~~~~~~~~~~~~~~~~~l~~~----~PDvVi~~g~~~s~p~~laA~~~~iP~vihe~-------------------- 123 (365)
T 3s2u_A 68 KSLVKAPLELLKSLFQALRVIRQL----RPVCVLGLGGYVTGPGGLAARLNGVPLVIHEQ-------------------- 123 (365)
T ss_dssp -----CHHHHHHHHHHHHHHHHHH----CCSEEEECSSSTHHHHHHHHHHTTCCEEEEEC--------------------
T ss_pred HHHHHHHHHHHHHHHHHHHHHHhc----CCCEEEEcCCcchHHHHHHHHHcCCCEEEEec--------------------
Confidence 0000 0111222344556778888 9999998 2 233467789999987532
Q ss_pred CCCCCCCCccccCCCCCCCCCCCCCccccCCCchhHHHHHHHhhhhcccceEEecChhhhhHHHHHHHHcCcccCCCCCC
Q 044031 154 SSFKDHPSSLLFIPGLPPVKSSFMPEPVLDRQKPIYDFFLNYSTSLSKSNGIIINTFDFLEQQAIKAIVNGDCVTNGTTP 233 (468)
Q Consensus 154 ~~~~~~~~~~~~~pg~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~s~~~le~~~~~~~~~~~~~~~~~~p 233 (468)
..+||+. .+.+.+....++.++++..+ ...
T Consensus 124 ----------n~~~G~~-------------------------nr~l~~~a~~v~~~~~~~~~---------------~~~ 153 (365)
T 3s2u_A 124 ----------NAVAGTA-------------------------NRSLAPIARRVCEAFPDTFP---------------ASD 153 (365)
T ss_dssp ----------SSSCCHH-------------------------HHHHGGGCSEEEESSTTSSC---------------C--
T ss_pred ----------chhhhhH-------------------------HHhhccccceeeeccccccc---------------CcC
Confidence 1122221 11111111223334433211 114
Q ss_pred CeeEecccccCCcCCCCCCCCCCcchhHHhhcCCCCCceEEeccCCCcCCCHHHHHHHHHHHHh----CCCcEEEEEeCC
Q 044031 234 PLHCIGPLIVDAKDRAGGVSDDVSSDCLTWLDSQPSGSVVFLCFGSRGTFSAPQLKEIAIGLER----SNQRFLWVVRNP 309 (468)
Q Consensus 234 ~~~~VGpl~~~~~~~~~~~~~~~~~~l~~~l~~~~~~~~v~vs~GS~~~~~~~~~~~~~~al~~----~~~~~l~~~~~~ 309 (468)
+.+++|+.+..+.... .. ......++++.|+|..||.+...... .+.++++. .+..++|++|..
T Consensus 154 k~~~~g~pvr~~~~~~--------~~--~~~~~~~~~~~ilv~gGs~g~~~~~~--~~~~al~~l~~~~~~~vi~~~G~~ 221 (365)
T 3s2u_A 154 KRLTTGNPVRGELFLD--------AH--ARAPLTGRRVNLLVLGGSLGAEPLNK--LLPEALAQVPLEIRPAIRHQAGRQ 221 (365)
T ss_dssp -CEECCCCCCGGGCCC--------TT--SSCCCTTSCCEEEECCTTTTCSHHHH--HHHHHHHTSCTTTCCEEEEECCTT
T ss_pred cEEEECCCCchhhccc--------hh--hhcccCCCCcEEEEECCcCCccccch--hhHHHHHhcccccceEEEEecCcc
Confidence 6778887765543111 00 01112234558999999997654432 34455543 345688887764
Q ss_pred CCccccCCChhHHhhc--cCCCeEecCCCCHH-hhhCccCcceEEecCCcchHHHHHHhCCcEEecccc----cchhhHH
Q 044031 310 SNAAEAELPEGFLERT--KERGLVVKSWAPQS-TILGHESVGGFVTHCGWSSVVEAVTYGVPMIAWPLY----AEQFLNS 382 (468)
Q Consensus 310 ~~~~~~~~~~~~~~~~--~~~~~~v~~~~pq~-~il~~~~~~~~ithgG~~s~~eal~~GvP~v~~P~~----~DQ~~na 382 (468)
. .+...+.. .+.++.+.+|+++. ++++.+++ +|||+|.+|+.|++++|+|+|.+|+. .||..||
T Consensus 222 ~-------~~~~~~~~~~~~~~~~v~~f~~dm~~~l~~aDl--vI~raG~~Tv~E~~a~G~P~Ilip~p~~~~~~Q~~NA 292 (365)
T 3s2u_A 222 H-------AEITAERYRTVAVEADVAPFISDMAAAYAWADL--VICRAGALTVSELTAAGLPAFLVPLPHAIDDHQTRNA 292 (365)
T ss_dssp T-------HHHHHHHHHHTTCCCEEESCCSCHHHHHHHCSE--EEECCCHHHHHHHHHHTCCEEECC-----CCHHHHHH
T ss_pred c-------cccccceecccccccccccchhhhhhhhccceE--EEecCCcchHHHHHHhCCCeEEeccCCCCCcHHHHHH
Confidence 1 11222211 23467777999875 68888888 99999999999999999999999974 5899999
Q ss_pred HHHHhhcceeeeeccCCcccccCCCCccccHHHHHHHHHHHhcCch-hHHHHHHHHHH
Q 044031 383 VALVQEMKVAMPMFLNGEEETIGNGEGVVSAERVEERVRELMMGSE-GKALRERSLEM 439 (468)
Q Consensus 383 ~~~~~~~g~g~~~~~~~~~~~~~~~~~~~~~~~l~~av~~~l~~~~-~~~~~~~a~~l 439 (468)
+.+++. |+|+.+.. ++ ++++.|.++|.++|+|++ .++|+++|+++
T Consensus 293 ~~l~~~-G~a~~l~~--------~~---~~~~~L~~~i~~ll~d~~~~~~m~~~a~~~ 338 (365)
T 3s2u_A 293 EFLVRS-GAGRLLPQ--------KS---TGAAELAAQLSEVLMHPETLRSMADQARSL 338 (365)
T ss_dssp HHHHTT-TSEEECCT--------TT---CCHHHHHHHHHHHHHCTHHHHHHHHHHHHT
T ss_pred HHHHHC-CCEEEeec--------CC---CCHHHHHHHHHHHHCCHHHHHHHHHHHHhc
Confidence 999865 99999973 56 899999999999999996 56666666554
No 17
>3oti_A CALG3; calicheamicin, TDP, structural genomics, PSI-2, protein STRU initiative, center for eukaryotic structural genomics, CESG fold; HET: TYD C0T; 1.60A {Micromonospora echinospora} PDB: 3d0q_A* 3d0r_A*
Probab=99.98 E-value=2.1e-31 Score=263.80 Aligned_cols=330 Identities=14% Similarity=0.119 Sum_probs=211.9
Q ss_pred cceEEEecCCCccCHHHHHHHHHHHHhCCCCcEEEEEeCCCCCCchhhhhhhhccccCCCCCeeEEEcCCCCC-C-----
Q 044031 2 KKTIALYPGPAFHHMISMVELGKLILQHRSDVSITILVPSMPLEESKTCSYINSISHRLNPIISFYYLPAIQM-P----- 75 (468)
Q Consensus 2 ~~~Iv~~~~~~~GHv~P~l~LA~~L~~~G~~h~Vt~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~i~~~~l-p----- 75 (468)
+|||+|++.++.||++|++.||++|+++| |+|++++. .. . ..+ ...++.+..++.... .
T Consensus 20 ~MrIl~~~~~~~Ghv~~~~~La~~L~~~G--heV~v~~~-~~--~----~~~------~~~G~~~~~~~~~~~~~~~~~~ 84 (398)
T 3oti_A 20 HMRVLFVSSPGIGHLFPLIQLAWGFRTAG--HDVLIAVA-EH--A----DRA------AAAGLEVVDVAPDYSAVKVFEQ 84 (398)
T ss_dssp CCEEEEECCSSHHHHGGGHHHHHHHHHTT--CEEEEEES-SC--H----HHH------HTTTCEEEESSTTCCHHHHHHH
T ss_pred cCEEEEEcCCCcchHhHHHHHHHHHHHCC--CEEEEecc-ch--H----HHH------HhCCCeeEecCCccCHHHHhhh
Confidence 46899999999999999999999999999 99999976 21 1 112 223788888874310 0
Q ss_pred --------------CCCCChh---HHHHHHHHHhhHHHHHHHHhhhcCCCccEEEe----cCcHHHhhhCCCCeEEEecc
Q 044031 76 --------------SETLSRA---DIAIESIKLNSSNVFQALENISLTSKILSFII----TSTTSFSYHPNIPTYTYFNS 134 (468)
Q Consensus 76 --------------~~~~~~~---~~~~~~~~~~~~~l~~ll~~~~~~~~pD~vI~----~~~~~vA~~lgIP~i~~~~~ 134 (468)
....... ..+..........+.++++++ +||+||+ .++..+|+++|||++.....
T Consensus 85 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~----~pDlVv~d~~~~~~~~aA~~~giP~v~~~~~ 160 (398)
T 3oti_A 85 VAKDNPRFAETVATRPAIDLEEWGVQIAAVNRPLVDGTMALVDDY----RPDLVVYEQGATVGLLAADRAGVPAVQRNQS 160 (398)
T ss_dssp HHHHCHHHHHTGGGSCCCSGGGGHHHHHHHHGGGHHHHHHHHHHH----CCSEEEEETTCHHHHHHHHHHTCCEEEECCT
T ss_pred cccCCccccccccCChhhhHHHHHHHHHHHHHHHHHHHHHHHHHc----CCCEEEECchhhHHHHHHHHcCCCEEEEecc
Confidence 0011111 112223334556777777777 9999999 33556888999999876532
Q ss_pred hhHHHHHHHhhhhhhhcccCCCCCCCCccccCCCCCCCCCCCCCccccCCCchhHHHHHHHhh-hhcccceEEecChhhh
Q 044031 135 CASTLAAILYLPTLHNQITSSFKDHPSSLLFIPGLPPVKSSFMPEPVLDRQKPIYDFFLNYST-SLSKSNGIIINTFDFL 213 (468)
Q Consensus 135 ~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~pg~~~~~~~~l~~~~~~~~~~~~~~~~~~~~-~~~~~~~~l~~s~~~l 213 (468)
....... ....... .....+... ........+...-..+
T Consensus 161 ~~~~~~~------------------------------------~~~~~~~----l~~~~~~~~~~~~~~~~~~~~~~~~~ 200 (398)
T 3oti_A 161 AWRTRGM------------------------------------HRSIASF----LTDLMDKHQVSLPEPVATIESFPPSL 200 (398)
T ss_dssp TCCCTTH------------------------------------HHHHHTT----CHHHHHHTTCCCCCCSEEECSSCGGG
T ss_pred CCCccch------------------------------------hhHHHHH----HHHHHHHcCCCCCCCCeEEEeCCHHH
Confidence 1100000 0000000 000000000 0001111222221222
Q ss_pred hHHHHHHHHcCcccCCCCCCCeeEecccccCCcCCCCCCCCCCcchhHHhhcCCCCCceEEeccCCCcCC--CHHHHHHH
Q 044031 214 EQQAIKAIVNGDCVTNGTTPPLHCIGPLIVDAKDRAGGVSDDVSSDCLTWLDSQPSGSVVFLCFGSRGTF--SAPQLKEI 291 (468)
Q Consensus 214 e~~~~~~~~~~~~~~~~~~p~~~~VGpl~~~~~~~~~~~~~~~~~~l~~~l~~~~~~~~v~vs~GS~~~~--~~~~~~~~ 291 (468)
.... +....++.++ |. . .+..+.+|+...+++++|||++||+... ..+.+.++
T Consensus 201 ~~~~-----------~~~~~~~~~~-~~----~---------~~~~~~~~~~~~~~~~~v~v~~G~~~~~~~~~~~~~~~ 255 (398)
T 3oti_A 201 LLEA-----------EPEGWFMRWV-PY----G---------GGAVLGDRLPPVPARPEVAITMGTIELQAFGIGAVEPI 255 (398)
T ss_dssp GTTS-----------CCCSBCCCCC-CC----C---------CCEECCSSCCCCCSSCEEEECCTTTHHHHHCGGGHHHH
T ss_pred CCCC-----------CCCCCCcccc-CC----C---------CCcCCchhhhcCCCCCEEEEEcCCCccccCcHHHHHHH
Confidence 1100 0000011111 00 0 1222344666555667999999999643 45668889
Q ss_pred HHHHHhCCCcEEEEEeCCCCccccCCChhHHhhccCCCeEecCCCCHHhhhCccCcceEEecCCcchHHHHHHhCCcEEe
Q 044031 292 AIGLERSNQRFLWVVRNPSNAAEAELPEGFLERTKERGLVVKSWAPQSTILGHESVGGFVTHCGWSSVVEAVTYGVPMIA 371 (468)
Q Consensus 292 ~~al~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~pq~~il~~~~~~~~ithgG~~s~~eal~~GvP~v~ 371 (468)
+++|+..+.+++|++++.. .+.+. ..++|+.+.+|+|+.++|+++++ ||||||+||++||+++|+|+|+
T Consensus 256 ~~~l~~~~~~~v~~~g~~~-------~~~l~--~~~~~v~~~~~~~~~~ll~~ad~--~v~~~G~~t~~Eal~~G~P~v~ 324 (398)
T 3oti_A 256 IAAAGEVDADFVLALGDLD-------ISPLG--TLPRNVRAVGWTPLHTLLRTCTA--VVHHGGGGTVMTAIDAGIPQLL 324 (398)
T ss_dssp HHHHHTSSSEEEEECTTSC-------CGGGC--SCCTTEEEESSCCHHHHHTTCSE--EEECCCHHHHHHHHHHTCCEEE
T ss_pred HHHHHcCCCEEEEEECCcC-------hhhhc--cCCCcEEEEccCCHHHHHhhCCE--EEECCCHHHHHHHHHhCCCEEE
Confidence 9999999999999988751 11111 12458889999999999999888 9999999999999999999999
Q ss_pred cccccchhhHH--HHHHhhcceeeeeccCCcccccCCCCccccHHHHHHHHHHHhcCchhHHHHHHHHHHHHHHHH
Q 044031 372 WPLYAEQFLNS--VALVQEMKVAMPMFLNGEEETIGNGEGVVSAERVEERVRELMMGSEGKALRERSLEMRMMAAT 445 (468)
Q Consensus 372 ~P~~~DQ~~na--~~~~~~~g~g~~~~~~~~~~~~~~~~~~~~~~~l~~av~~~l~~~~~~~~~~~a~~l~~~~~~ 445 (468)
+|...||+.|| .++++ .|+|+.++. .+ .+.+.|. ++++|+ +++++++++++.+++
T Consensus 325 ~p~~~dq~~~a~~~~~~~-~g~g~~~~~--------~~---~~~~~l~----~ll~~~---~~~~~~~~~~~~~~~ 381 (398)
T 3oti_A 325 APDPRDQFQHTAREAVSR-RGIGLVSTS--------DK---VDADLLR----RLIGDE---SLRTAAREVREEMVA 381 (398)
T ss_dssp CCCTTCCSSCTTHHHHHH-HTSEEECCG--------GG---CCHHHHH----HHHHCH---HHHHHHHHHHHHHHT
T ss_pred cCCCchhHHHHHHHHHHH-CCCEEeeCC--------CC---CCHHHHH----HHHcCH---HHHHHHHHHHHHHHh
Confidence 99999999999 99975 599999974 34 6777776 788898 899999888887764
No 18
>4fzr_A SSFS6; structural genomics, PSI-biology, protein structure initiati enzyme discovery for natural product biosynthesis, natPro; 2.40A {Streptomyces SP} PDB: 4g2t_A*
Probab=99.98 E-value=4.4e-31 Score=261.45 Aligned_cols=337 Identities=14% Similarity=0.068 Sum_probs=202.2
Q ss_pred ceEEEecCCCccCHHHHHHHHHHHHhCCCCcEEEEEeCCCCCCchhhhhhhhccccCCCCCeeEEEcCCCC---------
Q 044031 3 KTIALYPGPAFHHMISMVELGKLILQHRSDVSITILVPSMPLEESKTCSYINSISHRLNPIISFYYLPAIQ--------- 73 (468)
Q Consensus 3 ~~Iv~~~~~~~GHv~P~l~LA~~L~~~G~~h~Vt~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~i~~~~--------- 73 (468)
|||+|++.++.||++|++.||++|+++| |+|+++++.. +...+.. .++.+..++...
T Consensus 16 MrIl~~~~~~~gh~~~~~~La~~L~~~G--heV~v~~~~~------~~~~~~~------~G~~~~~~~~~~~~~~~~~~~ 81 (398)
T 4fzr_A 16 MRILVIAGCSEGFVMPLVPLSWALRAAG--HEVLVAASEN------MGPTVTG------AGLPFAPTCPSLDMPEVLSWD 81 (398)
T ss_dssp CEEEEECCSSHHHHGGGHHHHHHHHHTT--CEEEEEEEGG------GHHHHHH------TTCCEEEEESSCCHHHHHSBC
T ss_pred eEEEEEcCCCcchHHHHHHHHHHHHHCC--CEEEEEcCHH------HHHHHHh------CCCeeEecCCccchHhhhhhh
Confidence 5799999999999999999999999999 9999997532 1112222 267777775320
Q ss_pred ---CCCCCC-ChhHH-------HHHHHHHhhHHHHHHHHhhhcCCCccEEEe----cCcHHHhhhCCCCeEEEecchhHH
Q 044031 74 ---MPSETL-SRADI-------AIESIKLNSSNVFQALENISLTSKILSFII----TSTTSFSYHPNIPTYTYFNSCAST 138 (468)
Q Consensus 74 ---lp~~~~-~~~~~-------~~~~~~~~~~~l~~ll~~~~~~~~pD~vI~----~~~~~vA~~lgIP~i~~~~~~~~~ 138 (468)
.+.... ..... +..........+.++++++ +||+||+ .++..+|+++|||++.+.......
T Consensus 82 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~----~pDlVv~d~~~~~~~~~a~~~giP~v~~~~~~~~~ 157 (398)
T 4fzr_A 82 REGNRTTMPREEKPLLEHIGRGYGRLVLRMRDEALALAERW----KPDLVLTETYSLTGPLVAATLGIPWIEQSIRLASP 157 (398)
T ss_dssp TTSCBCCCCSSHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH----CCSEEEEETTCTHHHHHHHHHTCCEEEECCSSCCC
T ss_pred ccCcccccccchhhHHHHHHHHHHHHHHHHHHHHHHHHHhC----CCCEEEECccccHHHHHHHhhCCCEEEeccCCCCc
Confidence 000000 11111 1122223344566666666 9999999 445568888999999766543211
Q ss_pred HHHHHhhhhhhhcccCCCCCCCCccccCCCCCCCCCCCCCccccCCCchhHHHHHHHhhhhcccceEEecChhhhhHHHH
Q 044031 139 LAAILYLPTLHNQITSSFKDHPSSLLFIPGLPPVKSSFMPEPVLDRQKPIYDFFLNYSTSLSKSNGIIINTFDFLEQQAI 218 (468)
Q Consensus 139 ~~~~~~~p~~~~~~~~~~~~~~~~~~~~pg~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~s~~~le~~~~ 218 (468)
.............. ..--+++. ....+..+......+....
T Consensus 158 ~~~~~~~~~~l~~~-----------~~~~~~~~---------------------------~~~~~~~~~~~~~~~~~~~- 198 (398)
T 4fzr_A 158 ELIKSAGVGELAPE-----------LAELGLTD---------------------------FPDPLLSIDVCPPSMEAQP- 198 (398)
T ss_dssp HHHHHHHHHHTHHH-----------HHTTTCSS---------------------------CCCCSEEEECSCGGGC----
T ss_pred hhhhHHHHHHHHHH-----------HHHcCCCC---------------------------CCCCCeEEEeCChhhCCCC-
Confidence 10000000000000 00000000 0001112222222222110
Q ss_pred HHHHcCcccCCCCCCCeeEecccccCCcCCCCCCCCCCcchhHHhhcCCCCCceEEeccCCCcCC--------CHHHHHH
Q 044031 219 KAIVNGDCVTNGTTPPLHCIGPLIVDAKDRAGGVSDDVSSDCLTWLDSQPSGSVVFLCFGSRGTF--------SAPQLKE 290 (468)
Q Consensus 219 ~~~~~~~~~~~~~~p~~~~VGpl~~~~~~~~~~~~~~~~~~l~~~l~~~~~~~~v~vs~GS~~~~--------~~~~~~~ 290 (468)
.. ...++.++++.. ...++.+|+...+++++|||++||+... ..+.+..
T Consensus 199 ----~~------~~~~~~~~~~~~-------------~~~~~~~~~~~~~~~~~v~v~~G~~~~~~~~~~~~~~~~~~~~ 255 (398)
T 4fzr_A 199 ----KP------GTTKMRYVPYNG-------------RNDQVPSWVFEERKQPRLCLTFGTRVPLPNTNTIPGGLSLLQA 255 (398)
T ss_dssp -----C------CCEECCCCCCCC-------------SSCCCCHHHHSCCSSCEEECC----------------CCSHHH
T ss_pred ----CC------CCCCeeeeCCCC-------------CCCCCchhhhcCCCCCEEEEEccCcccccccccccchHHHHHH
Confidence 00 000111221110 1223456776655667999999999643 2345788
Q ss_pred HHHHHHhCCCcEEEEEeCCCCccccCCChhHHhhccCCCeEecCCCCHHhhhCccCcceEEecCCcchHHHHHHhCCcEE
Q 044031 291 IAIGLERSNQRFLWVVRNPSNAAEAELPEGFLERTKERGLVVKSWAPQSTILGHESVGGFVTHCGWSSVVEAVTYGVPMI 370 (468)
Q Consensus 291 ~~~al~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~pq~~il~~~~~~~~ithgG~~s~~eal~~GvP~v 370 (468)
++++++..+.+++|+.++.. .+.+. ..++|+.+.+|+|+.++|+++++ ||||||.||++||+++|+|+|
T Consensus 256 ~~~al~~~~~~~v~~~~~~~-------~~~l~--~~~~~v~~~~~~~~~~ll~~ad~--~v~~gG~~t~~Ea~~~G~P~v 324 (398)
T 4fzr_A 256 LSQELPKLGFEVVVAVSDKL-------AQTLQ--PLPEGVLAAGQFPLSAIMPACDV--VVHHGGHGTTLTCLSEGVPQV 324 (398)
T ss_dssp HHHHGGGGTCEEEECCCC-----------------CCTTEEEESCCCHHHHGGGCSE--EEECCCHHHHHHHHHTTCCEE
T ss_pred HHHHHHhCCCEEEEEeCCcc-------hhhhc--cCCCcEEEeCcCCHHHHHhhCCE--EEecCCHHHHHHHHHhCCCEE
Confidence 99999989999999887641 11111 12468889899999999999888 999999999999999999999
Q ss_pred ecccccchhhHHHHHHhhcceeeeeccCCcccccCCCCccccHHHHHHHHHHHhcCchhHHHHHHHHHHHHHHHH
Q 044031 371 AWPLYAEQFLNSVALVQEMKVAMPMFLNGEEETIGNGEGVVSAERVEERVRELMMGSEGKALRERSLEMRMMAAT 445 (468)
Q Consensus 371 ~~P~~~DQ~~na~~~~~~~g~g~~~~~~~~~~~~~~~~~~~~~~~l~~av~~~l~~~~~~~~~~~a~~l~~~~~~ 445 (468)
++|...||+.|+.++++. |+|+.+.. .+ ++.+.|.++|+++|+|+ ++++++++.++.+++
T Consensus 325 ~~p~~~~q~~~a~~~~~~-g~g~~~~~--------~~---~~~~~l~~ai~~ll~~~---~~~~~~~~~~~~~~~ 384 (398)
T 4fzr_A 325 SVPVIAEVWDSARLLHAA-GAGVEVPW--------EQ---AGVESVLAACARIRDDS---SYVGNARRLAAEMAT 384 (398)
T ss_dssp ECCCSGGGHHHHHHHHHT-TSEEECC------------------CHHHHHHHHHHCT---HHHHHHHHHHHHHTT
T ss_pred ecCCchhHHHHHHHHHHc-CCEEecCc--------cc---CCHHHHHHHHHHHHhCH---HHHHHHHHHHHHHHc
Confidence 999999999999999754 99999974 45 78999999999999999 899999888876654
No 19
>3tsa_A SPNG, NDP-rhamnosyltransferase; glycosyltransferase; HET: GLC; 1.70A {Saccharopolyspora spinosa} PDB: 3uyk_A* 3uyl_A*
Probab=99.97 E-value=1.4e-29 Score=250.14 Aligned_cols=160 Identities=15% Similarity=0.218 Sum_probs=128.2
Q ss_pred hHHhhcCCCCCceEEeccCCCcC--CC-HHHHHHHHHHHHhC-CCcEEEEEeCCCCccccCCChhHHhhccCCCeEecCC
Q 044031 260 CLTWLDSQPSGSVVFLCFGSRGT--FS-APQLKEIAIGLERS-NQRFLWVVRNPSNAAEAELPEGFLERTKERGLVVKSW 335 (468)
Q Consensus 260 l~~~l~~~~~~~~v~vs~GS~~~--~~-~~~~~~~~~al~~~-~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~ 335 (468)
+..|+...+++++|||++||... .. .+.+..++++ +.. +.+++|+.++. ..+.+. ....|+.+.+|
T Consensus 208 ~~~~~~~~~~~~~vlv~~G~~~~~~~~~~~~~~~~~~~-~~~p~~~~v~~~~~~---~~~~l~------~~~~~v~~~~~ 277 (391)
T 3tsa_A 208 FPAWGAARTSARRVCICMGRMVLNATGPAPLLRAVAAA-TELPGVEAVIAVPPE---HRALLT------DLPDNARIAES 277 (391)
T ss_dssp CCGGGSSCCSSEEEEEECCHHHHHHHCSHHHHHHHHHH-HTSTTEEEEEECCGG---GGGGCT------TCCTTEEECCS
T ss_pred CCchhhcCCCCCEEEEEcCCCCCcccchHHHHHHHHHh-ccCCCeEEEEEECCc---chhhcc------cCCCCEEEecc
Confidence 34577665566799999999953 23 5667778888 777 78999987754 111111 12468888999
Q ss_pred CCHHhhhCccCcceEEecCCcchHHHHHHhCCcEEecccccchhhHHHHHHhhcceeeeeccCCcccccC-CCCccccHH
Q 044031 336 APQSTILGHESVGGFVTHCGWSSVVEAVTYGVPMIAWPLYAEQFLNSVALVQEMKVAMPMFLNGEEETIG-NGEGVVSAE 414 (468)
Q Consensus 336 ~pq~~il~~~~~~~~ithgG~~s~~eal~~GvP~v~~P~~~DQ~~na~~~~~~~g~g~~~~~~~~~~~~~-~~~~~~~~~ 414 (468)
+|+.++++++++ ||||||.||++||+++|+|+|++|...||+.|+.++++. |+|+.+.. . .+ .+.+
T Consensus 278 ~~~~~ll~~ad~--~v~~~G~~t~~Ea~~~G~P~v~~p~~~~q~~~a~~~~~~-g~g~~~~~-------~~~~---~~~~ 344 (391)
T 3tsa_A 278 VPLNLFLRTCEL--VICAGGSGTAFTATRLGIPQLVLPQYFDQFDYARNLAAA-GAGICLPD-------EQAQ---SDHE 344 (391)
T ss_dssp CCGGGTGGGCSE--EEECCCHHHHHHHHHTTCCEEECCCSTTHHHHHHHHHHT-TSEEECCS-------HHHH---TCHH
T ss_pred CCHHHHHhhCCE--EEeCCCHHHHHHHHHhCCCEEecCCcccHHHHHHHHHHc-CCEEecCc-------cccc---CCHH
Confidence 999999977777 999999999999999999999999999999999999754 99999872 0 23 6899
Q ss_pred HHHHHHHHHhcCchhHHHHHHHHHHHHHHHH
Q 044031 415 RVEERVRELMMGSEGKALRERSLEMRMMAAT 445 (468)
Q Consensus 415 ~l~~av~~~l~~~~~~~~~~~a~~l~~~~~~ 445 (468)
.|.++|.++|+|+ +++++++++++.+.+
T Consensus 345 ~l~~ai~~ll~~~---~~~~~~~~~~~~~~~ 372 (391)
T 3tsa_A 345 QFTDSIATVLGDT---GFAAAAIKLSDEITA 372 (391)
T ss_dssp HHHHHHHHHHTCT---HHHHHHHHHHHHHHT
T ss_pred HHHHHHHHHHcCH---HHHHHHHHHHHHHHc
Confidence 9999999999999 899998888876653
No 20
>3otg_A CALG1; calicheamicin, TDP, structural genomics, PSI-2, protein STRU initiative, center for eukaryotic structural genomics, CESG fold; HET: TYD; 2.08A {Micromonospora echinospora} PDB: 3oth_A*
Probab=99.96 E-value=2.1e-28 Score=243.23 Aligned_cols=346 Identities=14% Similarity=0.119 Sum_probs=215.9
Q ss_pred cceEEEecCCCccCHHHHHHHHHHHHhCCCCcEEEEEeCCCCCCchhhhhhhhccccCCCCCeeEEEcCCC---C-----
Q 044031 2 KKTIALYPGPAFHHMISMVELGKLILQHRSDVSITILVPSMPLEESKTCSYINSISHRLNPIISFYYLPAI---Q----- 73 (468)
Q Consensus 2 ~~~Iv~~~~~~~GHv~P~l~LA~~L~~~G~~h~Vt~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~i~~~---~----- 73 (468)
+|||++++.++.||++|++.||++|+++| |+|++++.... ...+. ..++++..++.. .
T Consensus 20 ~MrIl~~~~~~~Gh~~~~~~la~~L~~~G--heV~v~~~~~~------~~~~~------~~g~~~~~~~~~~~~~~~~~~ 85 (412)
T 3otg_A 20 HMRVLFASLGTHGHTYPLLPLATAARAAG--HEVTFATGEGF------AGTLR------KLGFEPVATGMPVFDGFLAAL 85 (412)
T ss_dssp SCEEEEECCSSHHHHGGGHHHHHHHHHTT--CEEEEEECGGG------HHHHH------HTTCEEEECCCCHHHHHHHHH
T ss_pred eeEEEEEcCCCcccHHHHHHHHHHHHHCC--CEEEEEccHHH------HHHHH------hcCCceeecCcccccchhhhh
Confidence 36899999999999999999999999999 99999976421 11222 227888888741 0
Q ss_pred --------CCCC-----CCChhHHHHHH-HHHhhHHHHHHHHhhhcCCCccEEEe----cCcHHHhhhCCCCeEEEecch
Q 044031 74 --------MPSE-----TLSRADIAIES-IKLNSSNVFQALENISLTSKILSFII----TSTTSFSYHPNIPTYTYFNSC 135 (468)
Q Consensus 74 --------lp~~-----~~~~~~~~~~~-~~~~~~~l~~ll~~~~~~~~pD~vI~----~~~~~vA~~lgIP~i~~~~~~ 135 (468)
.+.. .......+... .......+.++++++ +||+||+ ..+..+|+++|||++.+....
T Consensus 86 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~----~pDvVv~~~~~~~~~~aa~~~giP~v~~~~~~ 161 (412)
T 3otg_A 86 RIRFDTDSPEGLTPEQLSELPQIVFGRVIPQRVFDELQPVIERL----RPDLVVQEISNYGAGLAALKAGIPTICHGVGR 161 (412)
T ss_dssp HHHHSCSCCTTCCHHHHTTSHHHHHHTHHHHHHHHHHHHHHHHH----CCSEEEEETTCHHHHHHHHHHTCCEEEECCSC
T ss_pred hhhhcccCCccCChhHhhHHHHHHHhccchHHHHHHHHHHHHhc----CCCEEEECchhhHHHHHHHHcCCCEEEecccc
Confidence 0000 00000001111 122335666777777 9999999 234557888999998865432
Q ss_pred hHHHHHHHhhhhhhhcccCCCCCCCCccccCCCCCCCCCCCCCccccCCCchhHHHHHHHhhhhcccceEEecChhhhhH
Q 044031 136 ASTLAAILYLPTLHNQITSSFKDHPSSLLFIPGLPPVKSSFMPEPVLDRQKPIYDFFLNYSTSLSKSNGIIINTFDFLEQ 215 (468)
Q Consensus 136 ~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~pg~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~s~~~le~ 215 (468)
.........+....... ..--|++.... ......+.++..+-..++.
T Consensus 162 ~~~~~~~~~~~~~~~~~-----------~~~~g~~~~~~----------------------~~~~~~d~~i~~~~~~~~~ 208 (412)
T 3otg_A 162 DTPDDLTRSIEEEVRGL-----------AQRLGLDLPPG----------------------RIDGFGNPFIDIFPPSLQE 208 (412)
T ss_dssp CCCSHHHHHHHHHHHHH-----------HHHTTCCCCSS----------------------CCGGGGCCEEECSCGGGSC
T ss_pred cCchhhhHHHHHHHHHH-----------HHHcCCCCCcc----------------------cccCCCCeEEeeCCHHhcC
Confidence 21000000000000000 00000100000 0011223334333333322
Q ss_pred HHHHHHHcCcccCCCCCCCeeEecccccCCcCCCCCCCCCCcchhHHh-hcCCCCCceEEeccCCCcCCCHHHHHHHHHH
Q 044031 216 QAIKAIVNGDCVTNGTTPPLHCIGPLIVDAKDRAGGVSDDVSSDCLTW-LDSQPSGSVVFLCFGSRGTFSAPQLKEIAIG 294 (468)
Q Consensus 216 ~~~~~~~~~~~~~~~~~p~~~~VGpl~~~~~~~~~~~~~~~~~~l~~~-l~~~~~~~~v~vs~GS~~~~~~~~~~~~~~a 294 (468)
... .. . .....+-+.... ...+..+| ....+++++||+++||......+.+.+++++
T Consensus 209 ~~~-~~---~-------~~~~~~~~~~~~-----------~~~~~~~~~~~~~~~~~~vlv~~G~~~~~~~~~~~~~~~~ 266 (412)
T 3otg_A 209 PEF-RA---R-------PRRHELRPVPFA-----------EQGDLPAWLSSRDTARPLVYLTLGTSSGGTVEVLRAAIDG 266 (412)
T ss_dssp HHH-HT---C-------TTEEECCCCCCC-----------CCCCCCGGGGGSCTTSCEEEEECTTTTCSCHHHHHHHHHH
T ss_pred Ccc-cC---C-------CCcceeeccCCC-----------CCCCCCCccccccCCCCEEEEEcCCCCcCcHHHHHHHHHH
Confidence 110 00 0 111111111000 11223345 2323456699999999975566778889999
Q ss_pred HHhCCCcEEEEEeCCCCccccCCChhHHhhccCCCeEecCCCCHHhhhCccCcceEEecCCcchHHHHHHhCCcEEeccc
Q 044031 295 LERSNQRFLWVVRNPSNAAEAELPEGFLERTKERGLVVKSWAPQSTILGHESVGGFVTHCGWSSVVEAVTYGVPMIAWPL 374 (468)
Q Consensus 295 l~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~pq~~il~~~~~~~~ithgG~~s~~eal~~GvP~v~~P~ 374 (468)
++..+.+++|+++...+ .+.+.. ...++.+.+|+|+.++|+++++ ||+|||+||++||+++|+|+|++|.
T Consensus 267 l~~~~~~~~~~~g~~~~--~~~l~~------~~~~v~~~~~~~~~~~l~~ad~--~v~~~g~~t~~Ea~a~G~P~v~~p~ 336 (412)
T 3otg_A 267 LAGLDADVLVASGPSLD--VSGLGE------VPANVRLESWVPQAALLPHVDL--VVHHGGSGTTLGALGAGVPQLSFPW 336 (412)
T ss_dssp HHTSSSEEEEECCSSCC--CTTCCC------CCTTEEEESCCCHHHHGGGCSE--EEESCCHHHHHHHHHHTCCEEECCC
T ss_pred HHcCCCEEEEEECCCCC--hhhhcc------CCCcEEEeCCCCHHHHHhcCcE--EEECCchHHHHHHHHhCCCEEecCC
Confidence 99889999999887510 011110 2457888899999999999988 9999999999999999999999999
Q ss_pred ccchhhHHHHHHhhcceeeeeccCCcccccCCCCccccHHHHHHHHHHHhcCchhHHHHHHHHHHHHHHHH
Q 044031 375 YAEQFLNSVALVQEMKVAMPMFLNGEEETIGNGEGVVSAERVEERVRELMMGSEGKALRERSLEMRMMAAT 445 (468)
Q Consensus 375 ~~DQ~~na~~~~~~~g~g~~~~~~~~~~~~~~~~~~~~~~~l~~av~~~l~~~~~~~~~~~a~~l~~~~~~ 445 (468)
..||..|+..+++. |+|+.+.. .+ ++.++|.++|.++|+|+ ++++++.+.++.+.+
T Consensus 337 ~~~q~~~~~~v~~~-g~g~~~~~--------~~---~~~~~l~~ai~~ll~~~---~~~~~~~~~~~~~~~ 392 (412)
T 3otg_A 337 AGDSFANAQAVAQA-GAGDHLLP--------DN---ISPDSVSGAAKRLLAEE---SYRAGARAVAAEIAA 392 (412)
T ss_dssp STTHHHHHHHHHHH-TSEEECCG--------GG---CCHHHHHHHHHHHHHCH---HHHHHHHHHHHHHHH
T ss_pred chhHHHHHHHHHHc-CCEEecCc--------cc---CCHHHHHHHHHHHHhCH---HHHHHHHHHHHHHhc
Confidence 99999999999765 99999974 34 79999999999999999 788887777776654
No 21
>2o6l_A UDP-glucuronosyltransferase 2B7; drug metabolism, rossman, MAD, enzyme, nucleotide binding, sugar,UDP-glucuronosyltransferase, UGT; 1.80A {Homo sapiens}
Probab=99.95 E-value=3.5e-27 Score=204.71 Aligned_cols=162 Identities=22% Similarity=0.401 Sum_probs=137.9
Q ss_pred CcchhHHhhcCCCCCceEEeccCCCc-CCCHHHHHHHHHHHHhCCCcEEEEEeCCCCccccCCChhHHhhccCCCeEecC
Q 044031 256 VSSDCLTWLDSQPSGSVVFLCFGSRG-TFSAPQLKEIAIGLERSNQRFLWVVRNPSNAAEAELPEGFLERTKERGLVVKS 334 (468)
Q Consensus 256 ~~~~l~~~l~~~~~~~~v~vs~GS~~-~~~~~~~~~~~~al~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~ 334 (468)
++.++.+|++..+++++|||++||+. ....+.+..++++|+..+.+++|++++. .++. .+.|+.+.+
T Consensus 7 l~~~~~~~l~~~~~~~~vlv~~Gs~~~~~~~~~~~~~~~al~~~~~~~~~~~g~~-------~~~~-----~~~~v~~~~ 74 (170)
T 2o6l_A 7 LPKEMEDFVQSSGENGVVVFSLGSMVSNMTEERANVIASALAQIPQKVLWRFDGN-------KPDT-----LGLNTRLYK 74 (170)
T ss_dssp CCHHHHHHHHTTTTTCEEEEECCSCCTTCCHHHHHHHHHHHTTSSSEEEEECCSS-------CCTT-----CCTTEEEES
T ss_pred CCHHHHHHHHcCCCCCEEEEECCCCcccCCHHHHHHHHHHHHhCCCeEEEEECCc-------Cccc-----CCCcEEEec
Confidence 78899999987766679999999996 4466778889999998899999998764 1111 235788889
Q ss_pred CCCHHhhhCccCcceEEecCCcchHHHHHHhCCcEEecccccchhhHHHHHHhhcceeeeeccCCcccccCCCCccccHH
Q 044031 335 WAPQSTILGHESVGGFVTHCGWSSVVEAVTYGVPMIAWPLYAEQFLNSVALVQEMKVAMPMFLNGEEETIGNGEGVVSAE 414 (468)
Q Consensus 335 ~~pq~~il~~~~~~~~ithgG~~s~~eal~~GvP~v~~P~~~DQ~~na~~~~~~~g~g~~~~~~~~~~~~~~~~~~~~~~ 414 (468)
|+||.+++.|+++++||||||+||++|++++|+|+|++|...||+.||+++++ .|+|+.++. .+ ++.+
T Consensus 75 ~~~~~~~l~~~~ad~~I~~~G~~t~~Ea~~~G~P~i~~p~~~~Q~~na~~l~~-~g~g~~~~~--------~~---~~~~ 142 (170)
T 2o6l_A 75 WIPQNDLLGHPKTRAFITHGGANGIYEAIYHGIPMVGIPLFADQPDNIAHMKA-RGAAVRVDF--------NT---MSST 142 (170)
T ss_dssp SCCHHHHHTSTTEEEEEECCCHHHHHHHHHHTCCEEECCCSTTHHHHHHHHHT-TTSEEECCT--------TT---CCHH
T ss_pred CCCHHHHhcCCCcCEEEEcCCccHHHHHHHcCCCEEeccchhhHHHHHHHHHH-cCCeEEecc--------cc---CCHH
Confidence 99999999888888899999999999999999999999999999999999975 599999874 45 8999
Q ss_pred HHHHHHHHHhcCchhHHHHHHHHHHHHHHH
Q 044031 415 RVEERVRELMMGSEGKALRERSLEMRMMAA 444 (468)
Q Consensus 415 ~l~~av~~~l~~~~~~~~~~~a~~l~~~~~ 444 (468)
+|.++|+++++|+ +|+++++++++.++
T Consensus 143 ~l~~~i~~ll~~~---~~~~~a~~~~~~~~ 169 (170)
T 2o6l_A 143 DLLNALKRVINDP---SYKENVMKLSRIQH 169 (170)
T ss_dssp HHHHHHHHHHHCH---HHHHHHHHHC----
T ss_pred HHHHHHHHHHcCH---HHHHHHHHHHHHhh
Confidence 9999999999998 89999999998775
No 22
>1f0k_A MURG, UDP-N-acetylglucosamine-N-acetylmuramyl- (pentapeptide) pyrophosphoryl-undecaprenol...; rossmann fold, transferase; 1.90A {Escherichia coli} SCOP: c.87.1.2 PDB: 1nlm_A*
Probab=99.83 E-value=1.1e-18 Score=170.00 Aligned_cols=310 Identities=13% Similarity=0.075 Sum_probs=187.6
Q ss_pred ceEEEecCCCccCHHHHHHHHHHHHhCCCCcEEEEEeCCCCCCchhhhhhhhccccCCCCCeeEEEcCCCCCCCCCCChh
Q 044031 3 KTIALYPGPAFHHMISMVELGKLILQHRSDVSITILVPSMPLEESKTCSYINSISHRLNPIISFYYLPAIQMPSETLSRA 82 (468)
Q Consensus 3 ~~Iv~~~~~~~GHv~P~l~LA~~L~~~G~~h~Vt~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~i~~~~lp~~~~~~~ 82 (468)
++|++++.+..||..+++.||+.|+++| |+|++++........ .. ...++++..++...++.. ...
T Consensus 7 mkIl~~~~~~gG~~~~~~~la~~L~~~G--~~V~v~~~~~~~~~~----~~------~~~g~~~~~~~~~~~~~~--~~~ 72 (364)
T 1f0k_A 7 KRLMVMAGGTGGHVFPGLAVAHHLMAQG--WQVRWLGTADRMEAD----LV------PKHGIEIDFIRISGLRGK--GIK 72 (364)
T ss_dssp CEEEEECCSSHHHHHHHHHHHHHHHTTT--CEEEEEECTTSTHHH----HG------GGGTCEEEECCCCCCTTC--CHH
T ss_pred cEEEEEeCCCccchhHHHHHHHHHHHcC--CEEEEEecCCcchhh----hc------cccCCceEEecCCccCcC--ccH
Confidence 6899999888899999999999999999 999999765432111 11 112677777765433221 111
Q ss_pred HHH--HHHHHHhhHHHHHHHHhhhcCCCccEEEe--cC----cHHHhhhCCCCeEEEecchhHHHHHHHhhhhhhhcccC
Q 044031 83 DIA--IESIKLNSSNVFQALENISLTSKILSFII--TS----TTSFSYHPNIPTYTYFNSCASTLAAILYLPTLHNQITS 154 (468)
Q Consensus 83 ~~~--~~~~~~~~~~l~~ll~~~~~~~~pD~vI~--~~----~~~vA~~lgIP~i~~~~~~~~~~~~~~~~p~~~~~~~~ 154 (468)
..+ ..........+.+++++. +||+|++ .+ +..+++.+|+|++......
T Consensus 73 ~~~~~~~~~~~~~~~l~~~l~~~----~pDvv~~~~~~~~~~~~~~~~~~~~p~v~~~~~~------------------- 129 (364)
T 1f0k_A 73 ALIAAPLRIFNAWRQARAIMKAY----KPDVVLGMGGYVSGPGGLAAWSLGIPVVLHEQNG------------------- 129 (364)
T ss_dssp HHHTCHHHHHHHHHHHHHHHHHH----CCSEEEECSSTTHHHHHHHHHHTTCCEEEEECSS-------------------
T ss_pred HHHHHHHHHHHHHHHHHHHHHhc----CCCEEEEeCCcCchHHHHHHHHcCCCEEEEecCC-------------------
Confidence 110 001112234456666666 9999999 22 2346677899988643210
Q ss_pred CCCCCCCccccCCCCCCCCCCCCCccccCCCchhHHHHHHHhhhhcccceEEecChhhhhHHHHHHHHcCcccCCCCCCC
Q 044031 155 SFKDHPSSLLFIPGLPPVKSSFMPEPVLDRQKPIYDFFLNYSTSLSKSNGIIINTFDFLEQQAIKAIVNGDCVTNGTTPP 234 (468)
Q Consensus 155 ~~~~~~~~~~~~pg~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~s~~~le~~~~~~~~~~~~~~~~~~p~ 234 (468)
.++. ... .....++.++..+ ++. + ++
T Consensus 130 -----------~~~~-------------------~~~-----~~~~~~d~v~~~~-~~~-----------~-------~~ 155 (364)
T 1f0k_A 130 -----------IAGL-------------------TNK-----WLAKIATKVMQAF-PGA-----------F-------PN 155 (364)
T ss_dssp -----------SCCH-------------------HHH-----HHTTTCSEEEESS-TTS-----------S-------SS
T ss_pred -----------CCcH-------------------HHH-----HHHHhCCEEEecC-hhh-----------c-------CC
Confidence 0000 000 0112234444432 211 1 34
Q ss_pred eeEecccccCCcCCCCCCCCCCcchhHHhhcCCCCCceEEeccCCCcCCCHHHHHHHHHHHHhC--CCcEEEEEeCCCCc
Q 044031 235 LHCIGPLIVDAKDRAGGVSDDVSSDCLTWLDSQPSGSVVFLCFGSRGTFSAPQLKEIAIGLERS--NQRFLWVVRNPSNA 312 (468)
Q Consensus 235 ~~~VGpl~~~~~~~~~~~~~~~~~~l~~~l~~~~~~~~v~vs~GS~~~~~~~~~~~~~~al~~~--~~~~l~~~~~~~~~ 312 (468)
+..+|..+....... + ...+.+...+++++|++..|+... .+....++++++.. +.++++.+|...
T Consensus 156 ~~~i~n~v~~~~~~~-------~-~~~~~~~~~~~~~~il~~~g~~~~--~k~~~~li~a~~~l~~~~~~l~i~G~~~-- 223 (364)
T 1f0k_A 156 AEVVGNPVRTDVLAL-------P-LPQQRLAGREGPVRVLVVGGSQGA--RILNQTMPQVAAKLGDSVTIWHQSGKGS-- 223 (364)
T ss_dssp CEECCCCCCHHHHTS-------C-CHHHHHTTCCSSEEEEEECTTTCC--HHHHHHHHHHHHHHGGGEEEEEECCTTC--
T ss_pred ceEeCCccchhhccc-------c-hhhhhcccCCCCcEEEEEcCchHh--HHHHHHHHHHHHHhcCCcEEEEEcCCch--
Confidence 556665443221000 0 111222222334467787888753 33334455555543 567777777651
Q ss_pred cccCCChhHHhhc---cCCCeEecCCCC-HHhhhCccCcceEEecCCcchHHHHHHhCCcEEecccc---cchhhHHHHH
Q 044031 313 AEAELPEGFLERT---KERGLVVKSWAP-QSTILGHESVGGFVTHCGWSSVVEAVTYGVPMIAWPLY---AEQFLNSVAL 385 (468)
Q Consensus 313 ~~~~~~~~~~~~~---~~~~~~v~~~~p-q~~il~~~~~~~~ithgG~~s~~eal~~GvP~v~~P~~---~DQ~~na~~~ 385 (468)
.+.+.+.. .-.++.+.+|++ -..++..+++ ||+++|.+++.||+++|+|+|+.|.. .||..|++.+
T Consensus 224 -----~~~l~~~~~~~~~~~v~~~g~~~~~~~~~~~ad~--~v~~sg~~~~~EAma~G~Pvi~~~~~g~~~~q~~~~~~~ 296 (364)
T 1f0k_A 224 -----QQSVEQAYAEAGQPQHKVTEFIDDMAAAYAWADV--VVCRSGALTVSEIAAAGLPALFVPFQHKDRQQYWNALPL 296 (364)
T ss_dssp -----HHHHHHHHHHTTCTTSEEESCCSCHHHHHHHCSE--EEECCCHHHHHHHHHHTCCEEECCCCCTTCHHHHHHHHH
T ss_pred -----HHHHHHHHhhcCCCceEEecchhhHHHHHHhCCE--EEECCchHHHHHHHHhCCCEEEeeCCCCchhHHHHHHHH
Confidence 12222211 124688889984 4678888888 99999999999999999999999987 7999999999
Q ss_pred HhhcceeeeeccCCcccccCCCCccccHHHHHHHHHHHhcCch-hHHHHHHH
Q 044031 386 VQEMKVAMPMFLNGEEETIGNGEGVVSAERVEERVRELMMGSE-GKALRERS 436 (468)
Q Consensus 386 ~~~~g~g~~~~~~~~~~~~~~~~~~~~~~~l~~av~~~l~~~~-~~~~~~~a 436 (468)
.+. |.|+.++. .+ ++.+++.++|.++ |++ .+++++++
T Consensus 297 ~~~-g~g~~~~~--------~d---~~~~~la~~i~~l--~~~~~~~~~~~~ 334 (364)
T 1f0k_A 297 EKA-GAAKIIEQ--------PQ---LSVDAVANTLAGW--SRETLLTMAERA 334 (364)
T ss_dssp HHT-TSEEECCG--------GG---CCHHHHHHHHHTC--CHHHHHHHHHHH
T ss_pred HhC-CcEEEecc--------cc---CCHHHHHHHHHhc--CHHHHHHHHHHH
Confidence 765 99998874 34 6699999999998 663 33444443
No 23
>2jzc_A UDP-N-acetylglucosamine transferase subunit ALG13; rossmann-like fold, endoplasmic reticulum, glycosyltransferase, structural genomics; NMR {Saccharomyces cerevisiae} PDB: 2ks6_A
Probab=99.59 E-value=4.2e-15 Score=132.09 Aligned_cols=121 Identities=12% Similarity=0.146 Sum_probs=86.7
Q ss_pred CCCceEEeccCCCcCCCHHHHHHH-----HHHHHhCC-CcEEEEEeCCCCccccCCChhHHhhc----------------
Q 044031 268 PSGSVVFLCFGSRGTFSAPQLKEI-----AIGLERSN-QRFLWVVRNPSNAAEAELPEGFLERT---------------- 325 (468)
Q Consensus 268 ~~~~~v~vs~GS~~~~~~~~~~~~-----~~al~~~~-~~~l~~~~~~~~~~~~~~~~~~~~~~---------------- 325 (468)
+++++|||+.||.... .+.+..+ +++|...+ .+++|++|.... ...+.+....
T Consensus 26 ~~~~~VlVtgGS~~~~-n~li~~vl~~~~l~~L~~~~~~~vv~q~G~~~~----~~~~~~~~~~~~~~~~~l~p~~~~~~ 100 (224)
T 2jzc_A 26 IEEKALFVTCGATVPF-PKLVSCVLSDEFCQELIQYGFVRLIIQFGRNYS----SEFEHLVQERGGQRESQKIPIDQFGC 100 (224)
T ss_dssp CCSCCEEEECCSCCSC-HHHHHHHTSHHHHHHHHTTTCCCEEECCCSSSC----CCCCSHHHHHTCEECSCCCSSCTTCT
T ss_pred CCCCEEEEEcCCchHH-HHHHHHHHHHHHHHHHhcCCCeEEEEEECCCch----hhHHHHHHhhhccccccccccccccc
Confidence 4456999999998422 2323333 48888777 799999997611 0111111000
Q ss_pred -----------cCCCeEecCCCCHH-hhhC-ccCcceEEecCCcchHHHHHHhCCcEEecccc----cchhhHHHHHHhh
Q 044031 326 -----------KERGLVVKSWAPQS-TILG-HESVGGFVTHCGWSSVVEAVTYGVPMIAWPLY----AEQFLNSVALVQE 388 (468)
Q Consensus 326 -----------~~~~~~v~~~~pq~-~il~-~~~~~~~ithgG~~s~~eal~~GvP~v~~P~~----~DQ~~na~~~~~~ 388 (468)
..-++.+.+|++++ ++++ .+++ +|||||+||++|++++|+|+|++|.. .||..||+++++.
T Consensus 101 ~~~~~~~~~~~~~~~v~v~~f~~~m~~~l~~~Adl--vIshaGagTv~Eal~~G~P~IvVP~~~~~~~HQ~~nA~~l~~~ 178 (224)
T 2jzc_A 101 GDTARQYVLMNGKLKVIGFDFSTKMQSIIRDYSDL--VISHAGTGSILDSLRLNKPLIVCVNDSLMDNHQQQIADKFVEL 178 (224)
T ss_dssp TCSCEEEESTTTSSEEEECCSSSSHHHHHHHHCSC--EEESSCHHHHHHHHHTTCCCCEECCSSCCCCHHHHHHHHHHHH
T ss_pred cccccccccccCCceEEEeeccchHHHHHHhcCCE--EEECCcHHHHHHHHHhCCCEEEEcCcccccchHHHHHHHHHHC
Confidence 01245677898876 7888 8888 99999999999999999999999984 4799999999865
Q ss_pred cceeeeec
Q 044031 389 MKVAMPMF 396 (468)
Q Consensus 389 ~g~g~~~~ 396 (468)
|+++.+.
T Consensus 179 -G~~~~~~ 185 (224)
T 2jzc_A 179 -GYVWSCA 185 (224)
T ss_dssp -SCCCEEC
T ss_pred -CCEEEcC
Confidence 9986553
No 24
>3hbm_A UDP-sugar hydrolase; PSEG; 1.80A {Campylobacter jejuni subsp} PDB: 3hbn_A*
Probab=99.46 E-value=4e-12 Score=117.68 Aligned_cols=116 Identities=11% Similarity=0.047 Sum_probs=86.4
Q ss_pred CceEEeccCCCcCCCHHHHHHHHHHHHhCCCcEEEEEeCCCCccccCCChhHHhhc-cCCCeEecCCCCHH-hhhCccCc
Q 044031 270 GSVVFLCFGSRGTFSAPQLKEIAIGLERSNQRFLWVVRNPSNAAEAELPEGFLERT-KERGLVVKSWAPQS-TILGHESV 347 (468)
Q Consensus 270 ~~~v~vs~GS~~~~~~~~~~~~~~al~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~-~~~~~~v~~~~pq~-~il~~~~~ 347 (468)
.+.|+|++|..... +....++++|.... ++.+++|.+ ....+.+.... ..+|+.+..|++++ +++..+++
T Consensus 157 ~~~ILv~~GG~d~~--~l~~~vl~~L~~~~-~i~vv~G~~-----~~~~~~l~~~~~~~~~v~v~~~~~~m~~~m~~aDl 228 (282)
T 3hbm_A 157 KYDFFICMGGTDIK--NLSLQIASELPKTK-IISIATSSS-----NPNLKKLQKFAKLHNNIRLFIDHENIAKLMNESNK 228 (282)
T ss_dssp CEEEEEECCSCCTT--CHHHHHHHHSCTTS-CEEEEECTT-----CTTHHHHHHHHHTCSSEEEEESCSCHHHHHHTEEE
T ss_pred CCeEEEEECCCchh--hHHHHHHHHhhcCC-CEEEEECCC-----chHHHHHHHHHhhCCCEEEEeCHHHHHHHHHHCCE
Confidence 44899999976432 34556778886654 567777765 11112232221 23488888999877 57777777
Q ss_pred ceEEecCCcchHHHHHHhCCcEEecccccchhhHHHHHHhhcceeeeecc
Q 044031 348 GGFVTHCGWSSVVEAVTYGVPMIAWPLYAEQFLNSVALVQEMKVAMPMFL 397 (468)
Q Consensus 348 ~~~ithgG~~s~~eal~~GvP~v~~P~~~DQ~~na~~~~~~~g~g~~~~~ 397 (468)
+||+|| +|+.|+++.|+|+|.+|+..+|..||+.+++. |+++.+..
T Consensus 229 --vI~~gG-~T~~E~~~~g~P~i~ip~~~~Q~~nA~~l~~~-G~~~~~~~ 274 (282)
T 3hbm_A 229 --LIISAS-SLVNEALLLKANFKAICYVKNQESTATWLAKK-GYEVEYKY 274 (282)
T ss_dssp --EEEESS-HHHHHHHHTTCCEEEECCSGGGHHHHHHHHHT-TCEEECGG
T ss_pred --EEECCc-HHHHHHHHcCCCEEEEeCCCCHHHHHHHHHHC-CCEEEcch
Confidence 999999 89999999999999999999999999999865 99998864
No 25
>3c48_A Predicted glycosyltransferases; retaining glycosyltransferase, beta alpha beta, substrate AS catalysis; 2.10A {Corynebacterium glutamicum} PDB: 3c4v_A* 3c4q_A*
Probab=99.24 E-value=3.4e-09 Score=105.34 Aligned_cols=353 Identities=11% Similarity=0.043 Sum_probs=175.7
Q ss_pred ceEEEecC-----------CCccCHHHHHHHHHHHHhCCCCcEEEEEeCCCCCCchhhhhhhhccccCCCCCeeEEEcCC
Q 044031 3 KTIALYPG-----------PAFHHMISMVELGKLILQHRSDVSITILVPSMPLEESKTCSYINSISHRLNPIISFYYLPA 71 (468)
Q Consensus 3 ~~Iv~~~~-----------~~~GHv~P~l~LA~~L~~~G~~h~Vt~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~i~~ 71 (468)
|||++++. ...|+-.....||+.|.++| |+|++++......... ... ...+++++.++.
T Consensus 21 mkIl~i~~~~~p~~~~~~~~~GG~~~~~~~la~~L~~~G--~~V~v~~~~~~~~~~~----~~~----~~~~v~v~~~~~ 90 (438)
T 3c48_A 21 MRVAMISMHTSPLQQPGTGDSGGMNVYILSTATELAKQG--IEVDIYTRATRPSQGE----IVR----VAENLRVINIAA 90 (438)
T ss_dssp CEEEEECTTSCTTCC-------CHHHHHHHHHHHHHHTT--CEEEEEEECCCGGGCS----EEE----EETTEEEEEECC
T ss_pred heeeeEEeeccccccCCCCCCCCHHHHHHHHHHHHHhcC--CEEEEEecCCCCCCcc----ccc----ccCCeEEEEecC
Confidence 57999985 24688899999999999999 9999998654321110 000 123777777765
Q ss_pred CCCCCCCCChhHHHHHHHHHhhHHHHHH-HHhhhcCCCccEEEe-c-----CcHHHhhhCCCCeEEEecchhHHHHHHHh
Q 044031 72 IQMPSETLSRADIAIESIKLNSSNVFQA-LENISLTSKILSFII-T-----STTSFSYHPNIPTYTYFNSCASTLAAILY 144 (468)
Q Consensus 72 ~~lp~~~~~~~~~~~~~~~~~~~~l~~l-l~~~~~~~~pD~vI~-~-----~~~~vA~~lgIP~i~~~~~~~~~~~~~~~ 144 (468)
.... ... .... ...+......+... ++.. .+||+|++ . .+..+++.+|+|++..........
T Consensus 91 ~~~~-~~~-~~~~-~~~~~~~~~~~~~~~~~~~---~~~Div~~~~~~~~~~~~~~~~~~~~p~v~~~h~~~~~~----- 159 (438)
T 3c48_A 91 GPYE-GLS-KEEL-PTQLAAFTGGMLSFTRREK---VTYDLIHSHYWLSGQVGWLLRDLWRIPLIHTAHTLAAVK----- 159 (438)
T ss_dssp SCSS-SCC-GGGG-GGGHHHHHHHHHHHHHHHT---CCCSEEEEEHHHHHHHHHHHHHHHTCCEEEECSSCHHHH-----
T ss_pred CCcc-ccc-hhHH-HHHHHHHHHHHHHHHHhcc---CCCCEEEeCCccHHHHHHHHHHHcCCCEEEEecCCcccc-----
Confidence 4211 111 1111 00011111111122 2222 25999998 2 223356678999886544221100
Q ss_pred hhhhhhcccCCCCCCCCccccCCCCCCCCCCCCCccccCCCchhHHHHHHHhhhhcccceEEecChhhhhHHHHHHHHcC
Q 044031 145 LPTLHNQITSSFKDHPSSLLFIPGLPPVKSSFMPEPVLDRQKPIYDFFLNYSTSLSKSNGIIINTFDFLEQQAIKAIVNG 224 (468)
Q Consensus 145 ~p~~~~~~~~~~~~~~~~~~~~pg~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~s~~~le~~~~~~~~~~ 224 (468)
...+ .... ......... .....+..++.++..|-...+. ....+. .
T Consensus 160 ---------------------~~~~---~~~~-------~~~~~~~~~-~~~~~~~~~d~ii~~s~~~~~~-~~~~~g-~ 205 (438)
T 3c48_A 160 ---------------------NSYR---DDSD-------TPESEARRI-CEQQLVDNADVLAVNTQEEMQD-LMHHYD-A 205 (438)
T ss_dssp ---------------------SCC-------C-------CHHHHHHHH-HHHHHHHHCSEEEESSHHHHHH-HHHHHC-C
T ss_pred ---------------------cccc---cccC-------CcchHHHHH-HHHHHHhcCCEEEEcCHHHHHH-HHHHhC-C
Confidence 0000 0000 000000111 1122345677777776443321 111110 0
Q ss_pred cccCCCCCCCeeEecccccCCcCCCCCCCCCCcchhHHhhcCCCCCceEEeccCCCcC-CCHHHHHHHHHHHHhC----C
Q 044031 225 DCVTNGTTPPLHCIGPLIVDAKDRAGGVSDDVSSDCLTWLDSQPSGSVVFLCFGSRGT-FSAPQLKEIAIGLERS----N 299 (468)
Q Consensus 225 ~~~~~~~~p~~~~VGpl~~~~~~~~~~~~~~~~~~l~~~l~~~~~~~~v~vs~GS~~~-~~~~~~~~~~~al~~~----~ 299 (468)
+..++..+...+......... ......+.+-+.-. ++..+++..|++.. ...+.+.+.+..+... +
T Consensus 206 ------~~~k~~vi~ngvd~~~~~~~~--~~~~~~~r~~~~~~-~~~~~i~~~G~~~~~Kg~~~li~a~~~l~~~~p~~~ 276 (438)
T 3c48_A 206 ------DPDRISVVSPGADVELYSPGN--DRATERSRRELGIP-LHTKVVAFVGRLQPFKGPQVLIKAVAALFDRDPDRN 276 (438)
T ss_dssp ------CGGGEEECCCCCCTTTSCCC------CHHHHHHTTCC-SSSEEEEEESCBSGGGCHHHHHHHHHHHHHHCTTCS
T ss_pred ------ChhheEEecCCccccccCCcc--cchhhhhHHhcCCC-CCCcEEEEEeeecccCCHHHHHHHHHHHHhhCCCcc
Confidence 013455665544322101100 00001133333221 22366777788752 2233333433434322 3
Q ss_pred CcEEEEEeCCCCccccCCChhHHh---hc-cCCCeEecCCCCHH---hhhCccCcceEEec----CCcchHHHHHHhCCc
Q 044031 300 QRFLWVVRNPSNAAEAELPEGFLE---RT-KERGLVVKSWAPQS---TILGHESVGGFVTH----CGWSSVVEAVTYGVP 368 (468)
Q Consensus 300 ~~~l~~~~~~~~~~~~~~~~~~~~---~~-~~~~~~v~~~~pq~---~il~~~~~~~~ith----gG~~s~~eal~~GvP 368 (468)
.+++ .+|.... .....+.+.+ +. ..+++.+.+++|+. .++..+++ +|.- +..+++.||+++|+|
T Consensus 277 ~~l~-i~G~~~~--~g~~~~~l~~~~~~~~l~~~v~~~g~~~~~~~~~~~~~adv--~v~ps~~e~~~~~~~Eama~G~P 351 (438)
T 3c48_A 277 LRVI-ICGGPSG--PNATPDTYRHMAEELGVEKRIRFLDPRPPSELVAVYRAADI--VAVPSFNESFGLVAMEAQASGTP 351 (438)
T ss_dssp EEEE-EECCBC--------CHHHHHHHHTTCTTTEEEECCCCHHHHHHHHHHCSE--EEECCSCCSSCHHHHHHHHTTCC
T ss_pred eEEE-EEeCCCC--CCcHHHHHHHHHHHcCCCCcEEEcCCCChHHHHHHHHhCCE--EEECccccCCchHHHHHHHcCCC
Confidence 4444 4454100 0001112222 11 24678888999874 56777887 6543 224589999999999
Q ss_pred EEecccccchhhHHHHHHhhcceeeeeccCCcccccCCCCccccHHHHHHHHHHHhcCch-hHHHHHHHHHHHHH
Q 044031 369 MIAWPLYAEQFLNSVALVQEMKVAMPMFLNGEEETIGNGEGVVSAERVEERVRELMMGSE-GKALRERSLEMRMM 442 (468)
Q Consensus 369 ~v~~P~~~DQ~~na~~~~~~~g~g~~~~~~~~~~~~~~~~~~~~~~~l~~av~~~l~~~~-~~~~~~~a~~l~~~ 442 (468)
+|+.+. ......+. .-+.|+.++. -+.+++.++|.++++|++ .++|.+++++..+.
T Consensus 352 vI~~~~----~~~~e~i~-~~~~g~~~~~-------------~d~~~la~~i~~l~~~~~~~~~~~~~~~~~~~~ 408 (438)
T 3c48_A 352 VIAARV----GGLPIAVA-EGETGLLVDG-------------HSPHAWADALATLLDDDETRIRMGEDAVEHART 408 (438)
T ss_dssp EEEESC----TTHHHHSC-BTTTEEEESS-------------CCHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHH
T ss_pred EEecCC----CChhHHhh-CCCcEEECCC-------------CCHHHHHHHHHHHHcCHHHHHHHHHHHHHHHHh
Confidence 999764 33444453 3257887763 478999999999999886 56777777766554
No 26
>1vgv_A UDP-N-acetylglucosamine 2-epimerase; structural genomics, isomerase; HET: UD1; 2.31A {Escherichia coli} SCOP: c.87.1.3 PDB: 1f6d_A*
Probab=99.23 E-value=7e-10 Score=108.28 Aligned_cols=138 Identities=15% Similarity=0.178 Sum_probs=86.1
Q ss_pred CceEEeccCCCcCCCHHHHHHHHHHHHh-----CCCcEEEEEeCCCCccccCCChhHHhhcc-CCCeEecCCCCH---Hh
Q 044031 270 GSVVFLCFGSRGTFSAPQLKEIAIGLER-----SNQRFLWVVRNPSNAAEAELPEGFLERTK-ERGLVVKSWAPQ---ST 340 (468)
Q Consensus 270 ~~~v~vs~GS~~~~~~~~~~~~~~al~~-----~~~~~l~~~~~~~~~~~~~~~~~~~~~~~-~~~~~v~~~~pq---~~ 340 (468)
++.|+++.|+...... .+..++++++. .+..+++..+.. ..+-+.+.+... .+++.+.+++++ ..
T Consensus 205 ~~~vl~~~gr~~~~~k-g~~~li~a~~~l~~~~~~~~l~i~~g~~-----~~~~~~l~~~~~~~~~v~~~g~~~~~~~~~ 278 (384)
T 1vgv_A 205 KKMILVTGHRRESFGR-GFEEICHALADIATTHQDIQIVYPVHLN-----PNVREPVNRILGHVKNVILIDPQEYLPFVW 278 (384)
T ss_dssp SEEEEEECCCBSSCCH-HHHHHHHHHHHHHHHCTTEEEEEECCBC-----HHHHHHHHHHHTTCTTEEEECCCCHHHHHH
T ss_pred CCEEEEEeCCccccch-HHHHHHHHHHHHHhhCCCeEEEEEcCCC-----HHHHHHHHHHhhcCCCEEEeCCCCHHHHHH
Confidence 4478888887754322 23444444432 245666644432 001111222111 257888677765 45
Q ss_pred hhCccCcceEEecCCcchHHHHHHhCCcEEecccccchhhHHHHHHhhcceeeeeccCCcccccCCCCccccHHHHHHHH
Q 044031 341 ILGHESVGGFVTHCGWSSVVEAVTYGVPMIAWPLYAEQFLNSVALVQEMKVAMPMFLNGEEETIGNGEGVVSAERVEERV 420 (468)
Q Consensus 341 il~~~~~~~~ithgG~~s~~eal~~GvP~v~~P~~~DQ~~na~~~~~~~g~g~~~~~~~~~~~~~~~~~~~~~~~l~~av 420 (468)
++..+++ ||+..| +.+.||+++|+|+|+.+..++... +.+. |.|+.++ .+.+++.++|
T Consensus 279 ~~~~ad~--~v~~Sg-~~~lEA~a~G~PvI~~~~~~~~~e----~v~~-g~g~lv~--------------~d~~~la~~i 336 (384)
T 1vgv_A 279 LMNHAWL--ILTDSG-GIQEEAPSLGKPVLVMRDTTERPE----AVTA-GTVRLVG--------------TDKQRIVEEV 336 (384)
T ss_dssp HHHHCSE--EEESSS-TGGGTGGGGTCCEEEESSCCSCHH----HHHH-TSEEEEC--------------SSHHHHHHHH
T ss_pred HHHhCcE--EEECCc-chHHHHHHcCCCEEEccCCCCcch----hhhC-CceEEeC--------------CCHHHHHHHH
Confidence 6888888 999885 458899999999999987544332 3345 8888776 3788999999
Q ss_pred HHHhcCch-hHHHHHH
Q 044031 421 RELMMGSE-GKALRER 435 (468)
Q Consensus 421 ~~~l~~~~-~~~~~~~ 435 (468)
.++++|++ .++|.++
T Consensus 337 ~~ll~d~~~~~~~~~~ 352 (384)
T 1vgv_A 337 TRLLKDENEYQAMSRA 352 (384)
T ss_dssp HHHHHCHHHHHHHHSS
T ss_pred HHHHhChHHHhhhhhc
Confidence 99999884 3444443
No 27
>3okp_A GDP-mannose-dependent alpha-(1-6)-phosphatidylino monomannoside mannosyltransferase...; GT-B fold, alpha-mannosyltransferase; HET: GDD; 2.00A {Corynebacterium glutamicum} PDB: 3okc_A* 3oka_A*
Probab=99.19 E-value=7.5e-09 Score=101.09 Aligned_cols=326 Identities=10% Similarity=-0.000 Sum_probs=177.1
Q ss_pred cceEEEecC--C--CccCHHHHHHHHHHHHhCCCCcEEEEEeCCCCCCchhhhhhhhccccCCCCCeeEEEcCCCCCCCC
Q 044031 2 KKTIALYPG--P--AFHHMISMVELGKLILQHRSDVSITILVPSMPLEESKTCSYINSISHRLNPIISFYYLPAIQMPSE 77 (468)
Q Consensus 2 ~~~Iv~~~~--~--~~GHv~P~l~LA~~L~~~G~~h~Vt~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~i~~~~lp~~ 77 (468)
+++|++++. + ..|.-.-...|++.| +| |+|++++....... ..... ...++.+..++....
T Consensus 4 ~mkIl~v~~~~~p~~gG~~~~~~~l~~~L--~g--~~v~v~~~~~~~~~--~~~~~------~~~~~~~~~~~~~~~--- 68 (394)
T 3okp_A 4 SRKTLVVTNDFPPRIGGIQSYLRDFIATQ--DP--ESIVVFASTQNAEE--AHAYD------KTLDYEVIRWPRSVM--- 68 (394)
T ss_dssp CCCEEEEESCCTTSCSHHHHHHHHHHTTS--CG--GGEEEEEECSSHHH--HHHHH------TTCSSEEEEESSSSC---
T ss_pred CceEEEEeCccCCccchHHHHHHHHHHHh--cC--CeEEEEECCCCccc--hhhhc------cccceEEEEcccccc---
Confidence 468999875 3 578888999999999 68 99999987654321 01111 233677777765411
Q ss_pred CCChhHHHHHHHHHhhHHHHHHHHhhhcCCCccEEEe------cCcHHHhhhCCCCeEEEecchhHHHHHHHhhhhhhhc
Q 044031 78 TLSRADIAIESIKLNSSNVFQALENISLTSKILSFII------TSTTSFSYHPNIPTYTYFNSCASTLAAILYLPTLHNQ 151 (468)
Q Consensus 78 ~~~~~~~~~~~~~~~~~~l~~ll~~~~~~~~pD~vI~------~~~~~vA~~lgIP~i~~~~~~~~~~~~~~~~p~~~~~ 151 (468)
.... .....+.+++++. +||+|++ .+...+++++|+|.+++.........
T Consensus 69 ~~~~---------~~~~~l~~~~~~~----~~Dvv~~~~~~~~~~~~~~~~~~~~~~~i~~~h~~~~~~----------- 124 (394)
T 3okp_A 69 LPTP---------TTAHAMAEIIRER----EIDNVWFGAAAPLALMAGTAKQAGASKVIASTHGHEVGW----------- 124 (394)
T ss_dssp CSCH---------HHHHHHHHHHHHT----TCSEEEESSCTTGGGGHHHHHHTTCSEEEEECCSTHHHH-----------
T ss_pred ccch---------hhHHHHHHHHHhc----CCCEEEECCcchHHHHHHHHHhcCCCcEEEEeccchhhh-----------
Confidence 1110 1223455666666 9999998 23444678899995554442211100
Q ss_pred ccCCCCCCCCccccCCCCCCCCCCCCCccccCCCchhHHHHHHHhhhhcccceEEecChhhhhHHHHHHHHcCcccCCCC
Q 044031 152 ITSSFKDHPSSLLFIPGLPPVKSSFMPEPVLDRQKPIYDFFLNYSTSLSKSNGIIINTFDFLEQQAIKAIVNGDCVTNGT 231 (468)
Q Consensus 152 ~~~~~~~~~~~~~~~pg~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~s~~~le~~~~~~~~~~~~~~~~~ 231 (468)
.......... ...+..++.++..|-...+ ........
T Consensus 125 --------------------------------~~~~~~~~~~--~~~~~~~d~ii~~s~~~~~-~~~~~~~~-------- 161 (394)
T 3okp_A 125 --------------------------------SMLPGSRQSL--RKIGTEVDVLTYISQYTLR-RFKSAFGS-------- 161 (394)
T ss_dssp --------------------------------TTSHHHHHHH--HHHHHHCSEEEESCHHHHH-HHHHHHCS--------
T ss_pred --------------------------------hhcchhhHHH--HHHHHhCCEEEEcCHHHHH-HHHHhcCC--------
Confidence 0000111111 2233556777776643322 11121210
Q ss_pred CCCeeEecccccCCcCCCCCCCCCCcchhHHhhcCCCCCceEEeccCCCc-CCCHHHHHHHHHHHHh--CCCcEEEEEeC
Q 044031 232 TPPLHCIGPLIVDAKDRAGGVSDDVSSDCLTWLDSQPSGSVVFLCFGSRG-TFSAPQLKEIAIGLER--SNQRFLWVVRN 308 (468)
Q Consensus 232 ~p~~~~VGpl~~~~~~~~~~~~~~~~~~l~~~l~~~~~~~~v~vs~GS~~-~~~~~~~~~~~~al~~--~~~~~l~~~~~ 308 (468)
..++..+...+......... ......+.+-+.- +++..+++..|+.. ....+.+.+.+..+.. .+.+++++ |.
T Consensus 162 ~~~~~vi~ngv~~~~~~~~~--~~~~~~~~~~~~~-~~~~~~i~~~G~~~~~Kg~~~li~a~~~l~~~~~~~~l~i~-G~ 237 (394)
T 3okp_A 162 HPTFEHLPSGVDVKRFTPAT--PEDKSATRKKLGF-TDTTPVIACNSRLVPRKGQDSLIKAMPQVIAARPDAQLLIV-GS 237 (394)
T ss_dssp SSEEEECCCCBCTTTSCCCC--HHHHHHHHHHTTC-CTTCCEEEEESCSCGGGCHHHHHHHHHHHHHHSTTCEEEEE-CC
T ss_pred CCCeEEecCCcCHHHcCCCC--chhhHHHHHhcCC-CcCceEEEEEeccccccCHHHHHHHHHHHHhhCCCeEEEEE-cC
Confidence 13566665544322101000 0001222222322 22336667778874 2233334444444433 25565554 43
Q ss_pred CCCccccCCChhHHhhc--cCCCeEecCCCCHHh---hhCccCcceEEe-----------cCCcchHHHHHHhCCcEEec
Q 044031 309 PSNAAEAELPEGFLERT--KERGLVVKSWAPQST---ILGHESVGGFVT-----------HCGWSSVVEAVTYGVPMIAW 372 (468)
Q Consensus 309 ~~~~~~~~~~~~~~~~~--~~~~~~v~~~~pq~~---il~~~~~~~~it-----------hgG~~s~~eal~~GvP~v~~ 372 (468)
.. ..+.+.... ..+++.+.+|+|+.+ ++..+++ +|. -|..+++.||+++|+|+|+.
T Consensus 238 g~------~~~~l~~~~~~~~~~v~~~g~~~~~~~~~~~~~ad~--~v~ps~~~~~~~~~e~~~~~~~Ea~a~G~PvI~~ 309 (394)
T 3okp_A 238 GR------YESTLRRLATDVSQNVKFLGRLEYQDMINTLAAADI--FAMPARTRGGGLDVEGLGIVYLEAQACGVPVIAG 309 (394)
T ss_dssp CT------THHHHHHHTGGGGGGEEEEESCCHHHHHHHHHHCSE--EEECCCCBGGGTBCCSSCHHHHHHHHTTCCEEEC
T ss_pred ch------HHHHHHHHHhcccCeEEEcCCCCHHHHHHHHHhCCE--EEecCccccccccccccCcHHHHHHHcCCCEEEe
Confidence 31 111222111 235788889998665 5777777 665 45567899999999999998
Q ss_pred ccccchhhHHHHHHhhcceeeeeccCCcccccCCCCccccHHHHHHHHHHHhcCch-hHHHHHHHHHHH
Q 044031 373 PLYAEQFLNSVALVQEMKVAMPMFLNGEEETIGNGEGVVSAERVEERVRELMMGSE-GKALRERSLEMR 440 (468)
Q Consensus 373 P~~~DQ~~na~~~~~~~g~g~~~~~~~~~~~~~~~~~~~~~~~l~~av~~~l~~~~-~~~~~~~a~~l~ 440 (468)
+..+ ....+ +. |.|+.++. -+.+++.++|.++++|++ .+++.+++++..
T Consensus 310 ~~~~----~~e~i-~~-~~g~~~~~-------------~d~~~l~~~i~~l~~~~~~~~~~~~~~~~~~ 359 (394)
T 3okp_A 310 TSGG----APETV-TP-ATGLVVEG-------------SDVDKLSELLIELLDDPIRRAAMGAAGRAHV 359 (394)
T ss_dssp SSTT----GGGGC-CT-TTEEECCT-------------TCHHHHHHHHHHHHTCHHHHHHHHHHHHHHH
T ss_pred CCCC----hHHHH-hc-CCceEeCC-------------CCHHHHHHHHHHHHhCHHHHHHHHHHHHHHH
Confidence 7643 22233 34 57777763 478999999999999886 566666665544
No 28
>1v4v_A UDP-N-acetylglucosamine 2-epimerase; UDP-GLCNAC, two domains, homodimer, riken structural genomics/proteomics initiative, RSGI; HET: MSE; 1.80A {Thermus thermophilus} SCOP: c.87.1.3
Probab=99.19 E-value=6.6e-10 Score=108.24 Aligned_cols=130 Identities=21% Similarity=0.261 Sum_probs=82.8
Q ss_pred CceEEeccCCCcCCCHHHHHHHHHHHHh-----CCCcEEEEEeCCCCccccCCChhHHhhcc-CCCeEecCCCCHH---h
Q 044031 270 GSVVFLCFGSRGTFSAPQLKEIAIGLER-----SNQRFLWVVRNPSNAAEAELPEGFLERTK-ERGLVVKSWAPQS---T 340 (468)
Q Consensus 270 ~~~v~vs~GS~~~~~~~~~~~~~~al~~-----~~~~~l~~~~~~~~~~~~~~~~~~~~~~~-~~~~~v~~~~pq~---~ 340 (468)
++.|+++.|...... .+..++++++. .+..+++..+.+ ..+-+.+.+... .+++.+.+++++. .
T Consensus 198 ~~~vl~~~gr~~~~k--~~~~ll~a~~~l~~~~~~~~lv~~~g~~-----~~~~~~l~~~~~~~~~v~~~g~~g~~~~~~ 270 (376)
T 1v4v_A 198 GPYVTVTMHRRENWP--LLSDLAQALKRVAEAFPHLTFVYPVHLN-----PVVREAVFPVLKGVRNFVLLDPLEYGSMAA 270 (376)
T ss_dssp SCEEEECCCCGGGGG--GHHHHHHHHHHHHHHCTTSEEEEECCSC-----HHHHHHHHHHHTTCTTEEEECCCCHHHHHH
T ss_pred CCEEEEEeCcccchH--HHHHHHHHHHHHHhhCCCeEEEEECCCC-----HHHHHHHHHHhccCCCEEEECCCCHHHHHH
Confidence 347778777653221 23445555432 245666555543 000112222111 3478787776654 6
Q ss_pred hhCccCcceEEecCCcchHHHHHHhCCcEEecccccchhhHHHHHHhhcceeeeeccCCcccccCCCCccccHHHHHHHH
Q 044031 341 ILGHESVGGFVTHCGWSSVVEAVTYGVPMIAWPLYAEQFLNSVALVQEMKVAMPMFLNGEEETIGNGEGVVSAERVEERV 420 (468)
Q Consensus 341 il~~~~~~~~ithgG~~s~~eal~~GvP~v~~P~~~DQ~~na~~~~~~~g~g~~~~~~~~~~~~~~~~~~~~~~~l~~av 420 (468)
++..+++ ||+.+| |.+.||+++|+|+|+.+..++++.. + +. |.|+.+. .+.++|.+++
T Consensus 271 ~~~~ad~--~v~~S~-g~~lEA~a~G~PvI~~~~~~~~~~~---~-~~-g~g~lv~--------------~d~~~la~~i 328 (376)
T 1v4v_A 271 LMRASLL--LVTDSG-GLQEEGAALGVPVVVLRNVTERPEG---L-KA-GILKLAG--------------TDPEGVYRVV 328 (376)
T ss_dssp HHHTEEE--EEESCH-HHHHHHHHTTCCEEECSSSCSCHHH---H-HH-TSEEECC--------------SCHHHHHHHH
T ss_pred HHHhCcE--EEECCc-CHHHHHHHcCCCEEeccCCCcchhh---h-cC-CceEECC--------------CCHHHHHHHH
Confidence 7877887 999884 4456999999999999876666652 3 44 8887764 4788999999
Q ss_pred HHHhcCch
Q 044031 421 RELMMGSE 428 (468)
Q Consensus 421 ~~~l~~~~ 428 (468)
.++++|++
T Consensus 329 ~~ll~d~~ 336 (376)
T 1v4v_A 329 KGLLENPE 336 (376)
T ss_dssp HHHHTCHH
T ss_pred HHHHhChH
Confidence 99999883
No 29
>3ot5_A UDP-N-acetylglucosamine 2-epimerase; structural genomics, center for structural genomics of infec diseases, csgid, alpha beta; HET: PGE; 2.20A {Listeria monocytogenes}
Probab=99.18 E-value=1.2e-09 Score=107.22 Aligned_cols=161 Identities=10% Similarity=0.132 Sum_probs=94.0
Q ss_pred CCceEEeccCCCcCCCHHHHHHHHHHHHh-----CCCcEEEEEeCCCCccccCCChhHHhhc-cCCCeEecCCCCH---H
Q 044031 269 SGSVVFLCFGSRGTFSAPQLKEIAIGLER-----SNQRFLWVVRNPSNAAEAELPEGFLERT-KERGLVVKSWAPQ---S 339 (468)
Q Consensus 269 ~~~~v~vs~GS~~~~~~~~~~~~~~al~~-----~~~~~l~~~~~~~~~~~~~~~~~~~~~~-~~~~~~v~~~~pq---~ 339 (468)
+++.++++.|....... .+..++++++. .+.++|+..+.+ ..+-+.+.+.. ...++.+.+++++ .
T Consensus 223 ~~~~vlv~~~r~~~~~~-~l~~ll~a~~~l~~~~~~~~~v~~~~~~-----~~~~~~l~~~~~~~~~v~l~~~l~~~~~~ 296 (403)
T 3ot5_A 223 DNRLILMTAHRRENLGE-PMQGMFEAVREIVESREDTELVYPMHLN-----PAVREKAMAILGGHERIHLIEPLDAIDFH 296 (403)
T ss_dssp TCEEEEECCCCHHHHTT-HHHHHHHHHHHHHHHCTTEEEEEECCSC-----HHHHHHHHHHHTTCTTEEEECCCCHHHHH
T ss_pred CCCEEEEEeCcccccCc-HHHHHHHHHHHHHHhCCCceEEEecCCC-----HHHHHHHHHHhCCCCCEEEeCCCCHHHHH
Confidence 44577777664321111 13444444432 356777765543 00111111111 2357888898874 3
Q ss_pred hhhCccCcceEEecCCcchHHHHHHhCCcEEecccccchhhHHHHHHhhcceeeeeccCCcccccCCCCccccHHHHHHH
Q 044031 340 TILGHESVGGFVTHCGWSSVVEAVTYGVPMIAWPLYAEQFLNSVALVQEMKVAMPMFLNGEEETIGNGEGVVSAERVEER 419 (468)
Q Consensus 340 ~il~~~~~~~~ithgG~~s~~eal~~GvP~v~~P~~~DQ~~na~~~~~~~g~g~~~~~~~~~~~~~~~~~~~~~~~l~~a 419 (468)
.++.++++ +|+..|. .+.||.++|+|+|+.|-.++++. .+ +. |.|+.+. .+.++|.++
T Consensus 297 ~l~~~ad~--vv~~SGg-~~~EA~a~g~PvV~~~~~~~~~e---~v-~~-g~~~lv~--------------~d~~~l~~a 354 (403)
T 3ot5_A 297 NFLRKSYL--VFTDSGG-VQEEAPGMGVPVLVLRDTTERPE---GI-EA-GTLKLIG--------------TNKENLIKE 354 (403)
T ss_dssp HHHHHEEE--EEECCHH-HHHHGGGTTCCEEECCSSCSCHH---HH-HH-TSEEECC--------------SCHHHHHHH
T ss_pred HHHHhcCE--EEECCcc-HHHHHHHhCCCEEEecCCCcchh---he-eC-CcEEEcC--------------CCHHHHHHH
Confidence 56667776 9988752 23699999999999976666654 23 45 8777665 478899999
Q ss_pred HHHHhcCchhHHHHHHHHHHHHHHHHhhcCCCCCChHHHHHHHHHHh
Q 044031 420 VRELMMGSEGKALRERSLEMRMMAATAWNNNDGGSSFTAFSNLFDLW 466 (468)
Q Consensus 420 v~~~l~~~~~~~~~~~a~~l~~~~~~a~~~~~~g~~~~~~~~~~~~~ 466 (468)
+.++++|+ +.+++. ++.. .... .++++.+.++.+.+.+
T Consensus 355 i~~ll~~~---~~~~~m---~~~~-~~~g--~~~aa~rI~~~l~~~l 392 (403)
T 3ot5_A 355 ALDLLDNK---ESHDKM---AQAA-NPYG--DGFAANRILAAIKSHF 392 (403)
T ss_dssp HHHHHHCH---HHHHHH---HHSC-CTTC--CSCHHHHHHHHHHHHH
T ss_pred HHHHHcCH---HHHHHH---Hhhc-Cccc--CCcHHHHHHHHHHHHh
Confidence 99999988 333322 1111 1223 5666666655554433
No 30
>2gek_A Phosphatidylinositol mannosyltransferase (PIMA); GT4 glycosyltransferase, rossmann fold, complex; HET: GDP; 2.40A {Mycobacterium smegmatis} PDB: 2gej_A*
Probab=99.10 E-value=3.6e-08 Score=96.71 Aligned_cols=143 Identities=13% Similarity=0.055 Sum_probs=88.2
Q ss_pred eEEeccCCC-c-CCCHHHHHHHHHHHHh--CCCcEEEEEeCCCCccccCCChhHHhhcc--CCCeEecCCCCHH---hhh
Q 044031 272 VVFLCFGSR-G-TFSAPQLKEIAIGLER--SNQRFLWVVRNPSNAAEAELPEGFLERTK--ERGLVVKSWAPQS---TIL 342 (468)
Q Consensus 272 ~v~vs~GS~-~-~~~~~~~~~~~~al~~--~~~~~l~~~~~~~~~~~~~~~~~~~~~~~--~~~~~v~~~~pq~---~il 342 (468)
.+++..|+. . ....+.+.+.+..+.. .+.++++ +|.. . . +.+.+... .+++.+.+++++. .++
T Consensus 209 ~~i~~~G~~~~~~Kg~~~li~a~~~l~~~~~~~~l~i-~G~~-----~-~-~~l~~~~~~~~~~v~~~g~~~~~~~~~~~ 280 (406)
T 2gek_A 209 RTVLFLGRYDEPRKGMAVLLAALPKLVARFPDVEILI-VGRG-----D-E-DELREQAGDLAGHLRFLGQVDDATKASAM 280 (406)
T ss_dssp CEEEEESCTTSGGGCHHHHHHHHHHHHTTSTTCEEEE-ESCS-----C-H-HHHHHHTGGGGGGEEECCSCCHHHHHHHH
T ss_pred eEEEEEeeeCccccCHHHHHHHHHHHHHHCCCeEEEE-EcCC-----c-H-HHHHHHHHhccCcEEEEecCCHHHHHHHH
Confidence 566667877 4 2233333333344433 2455544 4443 1 1 23332222 4678888999975 678
Q ss_pred CccCcceEEe--cCCcc-hHHHHHHhCCcEEecccccchhhHHHHHHhhcceeeeeccCCcccccCCCCccccHHHHHHH
Q 044031 343 GHESVGGFVT--HCGWS-SVVEAVTYGVPMIAWPLYAEQFLNSVALVQEMKVAMPMFLNGEEETIGNGEGVVSAERVEER 419 (468)
Q Consensus 343 ~~~~~~~~it--hgG~~-s~~eal~~GvP~v~~P~~~DQ~~na~~~~~~~g~g~~~~~~~~~~~~~~~~~~~~~~~l~~a 419 (468)
..+++-++-+ +-|.+ ++.||+++|+|+|+.+. ......+. .-+.|+.++. -+.+++.++
T Consensus 281 ~~adv~v~ps~~~e~~~~~~~Ea~a~G~PvI~~~~----~~~~e~i~-~~~~g~~~~~-------------~d~~~l~~~ 342 (406)
T 2gek_A 281 RSADVYCAPHLGGESFGIVLVEAMAAGTAVVASDL----DAFRRVLA-DGDAGRLVPV-------------DDADGMAAA 342 (406)
T ss_dssp HHSSEEEECCCSCCSSCHHHHHHHHHTCEEEECCC----HHHHHHHT-TTTSSEECCT-------------TCHHHHHHH
T ss_pred HHCCEEEecCCCCCCCchHHHHHHHcCCCEEEecC----CcHHHHhc-CCCceEEeCC-------------CCHHHHHHH
Confidence 8888833222 33444 89999999999999865 44555554 3367777763 478899999
Q ss_pred HHHHhcCch-hHHHHHHHHHHH
Q 044031 420 VRELMMGSE-GKALRERSLEMR 440 (468)
Q Consensus 420 v~~~l~~~~-~~~~~~~a~~l~ 440 (468)
|.++++|++ .+++.+++++..
T Consensus 343 i~~l~~~~~~~~~~~~~~~~~~ 364 (406)
T 2gek_A 343 LIGILEDDQLRAGYVARASERV 364 (406)
T ss_dssp HHHHHHCHHHHHHHHHHHHHHG
T ss_pred HHHHHcCHHHHHHHHHHHHHHH
Confidence 999999885 455555555543
No 31
>2iw1_A Lipopolysaccharide core biosynthesis protein RFAG; transferase, lipopolysaccharide biosynthesis, family GT-4, glycosyltransferase, LPS; HET: U2F; 1.5A {Escherichia coli} SCOP: c.87.1.8 PDB: 2iv7_A*
Probab=99.09 E-value=8.5e-09 Score=100.00 Aligned_cols=159 Identities=16% Similarity=0.116 Sum_probs=99.7
Q ss_pred ceEEeccCCCcCCCHHHHHHHHHHHHhCC------CcEEEEEeCCCCccccCCChhHHhh---c-cCCCeEecCCCCH-H
Q 044031 271 SVVFLCFGSRGTFSAPQLKEIAIGLERSN------QRFLWVVRNPSNAAEAELPEGFLER---T-KERGLVVKSWAPQ-S 339 (468)
Q Consensus 271 ~~v~vs~GS~~~~~~~~~~~~~~al~~~~------~~~l~~~~~~~~~~~~~~~~~~~~~---~-~~~~~~v~~~~pq-~ 339 (468)
..+++..|+... .+.+..++++++... .+ ++.+|.+. .+.+.+. . ...++.+.++..+ .
T Consensus 196 ~~~i~~~G~~~~--~K~~~~li~a~~~l~~~~~~~~~-l~i~G~g~-------~~~~~~~~~~~~~~~~v~~~g~~~~~~ 265 (374)
T 2iw1_A 196 QNLLLQVGSDFG--RKGVDRSIEALASLPESLRHNTL-LFVVGQDK-------PRKFEALAEKLGVRSNVHFFSGRNDVS 265 (374)
T ss_dssp CEEEEEECSCTT--TTTHHHHHHHHHTSCHHHHHTEE-EEEESSSC-------CHHHHHHHHHHTCGGGEEEESCCSCHH
T ss_pred CeEEEEeccchh--hcCHHHHHHHHHHhHhccCCceE-EEEEcCCC-------HHHHHHHHHHcCCCCcEEECCCcccHH
Confidence 367777787742 234555667776543 34 44455431 1222221 1 1357777777543 4
Q ss_pred hhhCccCcceEEe----cCCcchHHHHHHhCCcEEecccccchhhHHHHHHhhcceeeeeccCCcccccCCCCccccHHH
Q 044031 340 TILGHESVGGFVT----HCGWSSVVEAVTYGVPMIAWPLYAEQFLNSVALVQEMKVAMPMFLNGEEETIGNGEGVVSAER 415 (468)
Q Consensus 340 ~il~~~~~~~~it----hgG~~s~~eal~~GvP~v~~P~~~DQ~~na~~~~~~~g~g~~~~~~~~~~~~~~~~~~~~~~~ 415 (468)
.++..+++ +|. -|..+++.||+++|+|+|+.... .+...+.+. +.|+.+.. . -+.++
T Consensus 266 ~~~~~ad~--~v~ps~~e~~~~~~~Ea~a~G~Pvi~~~~~----~~~e~i~~~-~~g~~~~~---------~---~~~~~ 326 (374)
T 2iw1_A 266 ELMAAADL--LLHPAYQEAAGIVLLEAITAGLPVLTTAVC----GYAHYIADA-NCGTVIAE---------P---FSQEQ 326 (374)
T ss_dssp HHHHHCSE--EEECCSCCSSCHHHHHHHHHTCCEEEETTS----TTTHHHHHH-TCEEEECS---------S---CCHHH
T ss_pred HHHHhcCE--EEeccccCCcccHHHHHHHCCCCEEEecCC----CchhhhccC-CceEEeCC---------C---CCHHH
Confidence 67878887 664 45667899999999999998763 344556544 78888861 1 48899
Q ss_pred HHHHHHHHhcCch-hHHHHHHHHHHHHHHHHhhcCCCCCChHHHHHHHHHH
Q 044031 416 VEERVRELMMGSE-GKALRERSLEMRMMAATAWNNNDGGSSFTAFSNLFDL 465 (468)
Q Consensus 416 l~~av~~~l~~~~-~~~~~~~a~~l~~~~~~a~~~~~~g~~~~~~~~~~~~ 465 (468)
+.+++.++++|++ .+++.+++++..+.. .--+....+.++++.
T Consensus 327 l~~~i~~l~~~~~~~~~~~~~~~~~~~~~-------~~~~~~~~~~~~l~~ 370 (374)
T 2iw1_A 327 LNEVLRKALTQSPLRMAWAENARHYADTQ-------DLYSLPEKAADIITG 370 (374)
T ss_dssp HHHHHHHHHHCHHHHHHHHHHHHHHHHHS-------CCSCHHHHHHHHHHC
T ss_pred HHHHHHHHHcChHHHHHHHHHHHHHHHHh-------hHHHHHHHHHHHHHH
Confidence 9999999999886 566777776665521 123444555555543
No 32
>2jjm_A Glycosyl transferase, group 1 family protein; anthrax, nucleotide, carbohydrate; 3.10A {Bacillus anthracis} PDB: 3mbo_A*
Probab=99.07 E-value=2.6e-08 Score=97.49 Aligned_cols=330 Identities=12% Similarity=0.100 Sum_probs=168.3
Q ss_pred CcceEEEecCCC-ccCHHHHHHHHHHHHhCCCCcEEEEEeCCCCCCchhhhhhhhccccCCCCCeeEEEcCCCCCCCCCC
Q 044031 1 MKKTIALYPGPA-FHHMISMVELGKLILQHRSDVSITILVPSMPLEESKTCSYINSISHRLNPIISFYYLPAIQMPSETL 79 (468)
Q Consensus 1 m~~~Iv~~~~~~-~GHv~P~l~LA~~L~~~G~~h~Vt~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~i~~~~lp~~~~ 79 (468)
|++.+....+|. .|.-.-...||+.|+++| |+|++++...+.... . ..+++.+..++....+....
T Consensus 14 ~~~~~~~~~~p~~GG~~~~~~~la~~L~~~G--~~V~v~~~~~~~~~~-------~----~~~~i~~~~~~~~~~~~~~~ 80 (394)
T 2jjm_A 14 MKLKIGITCYPSVGGSGVVGTELGKQLAERG--HEIHFITSGLPFRLN-------K----VYPNIYFHEVTVNQYSVFQY 80 (394)
T ss_dssp -CCEEEEECCC--CHHHHHHHHHHHHHHHTT--CEEEEECSSCC-----------C----CCTTEEEECCCCC----CCS
T ss_pred heeeeehhcCCCCCCHHHHHHHHHHHHHhCC--CEEEEEeCCCCCccc-------c----cCCceEEEeccccccccccc
Confidence 778888888875 456677789999999999 999999765432110 0 33467766655432211000
Q ss_pred ChhHHHHHHHHHhhHHHHHHHHhhhcCCCccEEEe--cC----cHHHhhh-C--CCCeEEEecchhHHHHHHHhhhhhhh
Q 044031 80 SRADIAIESIKLNSSNVFQALENISLTSKILSFII--TS----TTSFSYH-P--NIPTYTYFNSCASTLAAILYLPTLHN 150 (468)
Q Consensus 80 ~~~~~~~~~~~~~~~~l~~ll~~~~~~~~pD~vI~--~~----~~~vA~~-l--gIP~i~~~~~~~~~~~~~~~~p~~~~ 150 (468)
.... ......+.+++++. +||+|++ .. ...++.+ + ++|++......... .
T Consensus 81 ~~~~------~~~~~~l~~~l~~~----~~Dvv~~~~~~~~~~~~~~~~~~~~~~~p~v~~~h~~~~~------~----- 139 (394)
T 2jjm_A 81 PPYD------LALASKMAEVAQRE----NLDILHVHYAIPHAICAYLAKQMIGERIKIVTTLHGTDIT------V----- 139 (394)
T ss_dssp CCHH------HHHHHHHHHHHHHH----TCSEEEECSSTTHHHHHHHHHHHTTTCSEEEEECCHHHHH------T-----
T ss_pred cccc------HHHHHHHHHHHHHc----CCCEEEEcchhHHHHHHHHHHHhhcCCCCEEEEEecCccc------c-----
Confidence 0100 11223455666666 9999998 22 1223443 3 58977643321100 0
Q ss_pred cccCCCCCCCCccccCCCCCCCCCCCCCccccCCCchhHHHHHHHhhhhcccceEEecChhhhhHHHHHHHHcCcccCCC
Q 044031 151 QITSSFKDHPSSLLFIPGLPPVKSSFMPEPVLDRQKPIYDFFLNYSTSLSKSNGIIINTFDFLEQQAIKAIVNGDCVTNG 230 (468)
Q Consensus 151 ~~~~~~~~~~~~~~~~pg~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~s~~~le~~~~~~~~~~~~~~~~ 230 (468)
.+.. ..+.... ...+..++.++..|-...+ .+...+ +
T Consensus 140 ----------------~~~~----------------~~~~~~~--~~~~~~ad~ii~~s~~~~~-----~~~~~~---~- 176 (394)
T 2jjm_A 140 ----------------LGSD----------------PSLNNLI--RFGIEQSDVVTAVSHSLIN-----ETHELV---K- 176 (394)
T ss_dssp ----------------TTTC----------------TTTHHHH--HHHHHHSSEEEESCHHHHH-----HHHHHT---C-
T ss_pred ----------------cCCC----------------HHHHHHH--HHHHhhCCEEEECCHHHHH-----HHHHhh---C-
Confidence 0000 0001111 1223456777776643222 111111 0
Q ss_pred CCCCeeEecccccCCcCCCCCCCCCCcchhHHhhcCCCCCceEEeccCCCcC-CCHHHHHHHHHHHHh-CCCcEEEEEeC
Q 044031 231 TTPPLHCIGPLIVDAKDRAGGVSDDVSSDCLTWLDSQPSGSVVFLCFGSRGT-FSAPQLKEIAIGLER-SNQRFLWVVRN 308 (468)
Q Consensus 231 ~~p~~~~VGpl~~~~~~~~~~~~~~~~~~l~~~l~~~~~~~~v~vs~GS~~~-~~~~~~~~~~~al~~-~~~~~l~~~~~ 308 (468)
...++..+...+....... . ....+.+-+.-. ++..+++..|+... ...+.+.+.+..+.. .+.+++ .+|.
T Consensus 177 ~~~~~~vi~ngv~~~~~~~-~----~~~~~~~~~~~~-~~~~~i~~~G~~~~~Kg~~~li~a~~~l~~~~~~~l~-i~G~ 249 (394)
T 2jjm_A 177 PNKDIQTVYNFIDERVYFK-R----DMTQLKKEYGIS-ESEKILIHISNFRKVKRVQDVVQAFAKIVTEVDAKLL-LVGD 249 (394)
T ss_dssp CSSCEEECCCCCCTTTCCC-C----CCHHHHHHTTCC----CEEEEECCCCGGGTHHHHHHHHHHHHHSSCCEEE-EECC
T ss_pred CcccEEEecCCccHHhcCC-c----chHHHHHHcCCC-CCCeEEEEeeccccccCHHHHHHHHHHHHhhCCCEEE-EECC
Confidence 0135666655443221011 0 122222323221 22256666788752 223333333333333 345544 4454
Q ss_pred CCCccccCCChhHHhhcc----CCCeEecCCCC-HHhhhCccCcceEE----ecCCcchHHHHHHhCCcEEecccccchh
Q 044031 309 PSNAAEAELPEGFLERTK----ERGLVVKSWAP-QSTILGHESVGGFV----THCGWSSVVEAVTYGVPMIAWPLYAEQF 379 (468)
Q Consensus 309 ~~~~~~~~~~~~~~~~~~----~~~~~v~~~~p-q~~il~~~~~~~~i----thgG~~s~~eal~~GvP~v~~P~~~DQ~ 379 (468)
.. ..+.+.+... ..++.+.++.. -..++..+++ +| .-|..+++.||+++|+|+|+.+..+
T Consensus 250 g~------~~~~l~~~~~~~~l~~~v~~~g~~~~~~~~~~~adv--~v~ps~~e~~~~~~~EAma~G~PvI~~~~~~--- 318 (394)
T 2jjm_A 250 GP------EFCTILQLVKNLHIEDRVLFLGKQDNVAELLAMSDL--MLLLSEKESFGLVLLEAMACGVPCIGTRVGG--- 318 (394)
T ss_dssp CT------THHHHHHHHHTTTCGGGBCCCBSCSCTHHHHHTCSE--EEECCSCCSCCHHHHHHHHTTCCEEEECCTT---
T ss_pred ch------HHHHHHHHHHHcCCCCeEEEeCchhhHHHHHHhCCE--EEeccccCCCchHHHHHHhcCCCEEEecCCC---
Confidence 31 1112221111 24566666644 3467878887 66 4455678999999999999987642
Q ss_pred hHHHHHHhhcceeeeeccCCcccccCCCCccccHHHHHHHHHHHhcCch-hHHHHHHHHHHH
Q 044031 380 LNSVALVQEMKVAMPMFLNGEEETIGNGEGVVSAERVEERVRELMMGSE-GKALRERSLEMR 440 (468)
Q Consensus 380 ~na~~~~~~~g~g~~~~~~~~~~~~~~~~~~~~~~~l~~av~~~l~~~~-~~~~~~~a~~l~ 440 (468)
....+. .-+.|+.++. -+.+++.++|.++++|++ .+++.+++++..
T Consensus 319 -~~e~v~-~~~~g~~~~~-------------~d~~~la~~i~~l~~~~~~~~~~~~~~~~~~ 365 (394)
T 2jjm_A 319 -IPEVIQ-HGDTGYLCEV-------------GDTTGVADQAIQLLKDEELHRNMGERARESV 365 (394)
T ss_dssp -STTTCC-BTTTEEEECT-------------TCHHHHHHHHHHHHHCHHHHHHHHHHHHHHH
T ss_pred -hHHHhh-cCCceEEeCC-------------CCHHHHHHHHHHHHcCHHHHHHHHHHHHHHH
Confidence 222232 2257777763 478999999999999885 556666665544
No 33
>3dzc_A UDP-N-acetylglucosamine 2-epimerase; structural genomics, in diseases, isomerase, center for structural genomics of INFE diseases, csgid; 2.35A {Vibrio cholerae}
Probab=99.06 E-value=3.7e-09 Score=103.62 Aligned_cols=132 Identities=14% Similarity=0.163 Sum_probs=81.2
Q ss_pred CCceEEeccCCCcCCCHHHHHHHHHHHHh-----CCCcEEEEEeCCCCccccCCChhHHhhc-cCCCeEecCCCCH---H
Q 044031 269 SGSVVFLCFGSRGTFSAPQLKEIAIGLER-----SNQRFLWVVRNPSNAAEAELPEGFLERT-KERGLVVKSWAPQ---S 339 (468)
Q Consensus 269 ~~~~v~vs~GS~~~~~~~~~~~~~~al~~-----~~~~~l~~~~~~~~~~~~~~~~~~~~~~-~~~~~~v~~~~pq---~ 339 (468)
++++|+++.+-..+... .+..++++++. .+.++|+.++.+ ..+-+.+.+.. ..+++.+.+++++ .
T Consensus 229 ~~~~vlv~~hR~~~~~~-~~~~ll~A~~~l~~~~~~~~~v~~~g~~-----~~~~~~l~~~~~~~~~v~~~~~lg~~~~~ 302 (396)
T 3dzc_A 229 SKKLILVTGHRRESFGG-GFERICQALITTAEQHPECQILYPVHLN-----PNVREPVNKLLKGVSNIVLIEPQQYLPFV 302 (396)
T ss_dssp TSEEEEEECSCBCCCTT-HHHHHHHHHHHHHHHCTTEEEEEECCBC-----HHHHHHHHHHTTTCTTEEEECCCCHHHHH
T ss_pred CCCEEEEEECCcccchh-HHHHHHHHHHHHHHhCCCceEEEEeCCC-----hHHHHHHHHHHcCCCCEEEeCCCCHHHHH
Confidence 34577776532222222 24455555543 356777765532 00111122211 2357877777753 3
Q ss_pred hhhCccCcceEEecCCcchHHHHHHhCCcEEecccccchhhHHHHHHhhcceeeeeccCCcccccCCCCccccHHHHHHH
Q 044031 340 TILGHESVGGFVTHCGWSSVVEAVTYGVPMIAWPLYAEQFLNSVALVQEMKVAMPMFLNGEEETIGNGEGVVSAERVEER 419 (468)
Q Consensus 340 ~il~~~~~~~~ithgG~~s~~eal~~GvP~v~~P~~~DQ~~na~~~~~~~g~g~~~~~~~~~~~~~~~~~~~~~~~l~~a 419 (468)
.++..+++ ||+-.| |.+.||.++|+|+|+..-..+++. .+ +. |.++.+. .+.++|.++
T Consensus 303 ~l~~~ad~--vv~~SG-g~~~EA~a~G~PvV~~~~~~~~~e---~v-~~-G~~~lv~--------------~d~~~l~~a 360 (396)
T 3dzc_A 303 YLMDRAHI--ILTDSG-GIQEEAPSLGKPVLVMRETTERPE---AV-AA-GTVKLVG--------------TNQQQICDA 360 (396)
T ss_dssp HHHHHCSE--EEESCS-GGGTTGGGGTCCEEECCSSCSCHH---HH-HH-TSEEECT--------------TCHHHHHHH
T ss_pred HHHHhcCE--EEECCc-cHHHHHHHcCCCEEEccCCCcchH---HH-Hc-CceEEcC--------------CCHHHHHHH
Confidence 56777777 999987 555799999999999865555432 33 45 8775554 368899999
Q ss_pred HHHHhcCch
Q 044031 420 VRELMMGSE 428 (468)
Q Consensus 420 v~~~l~~~~ 428 (468)
+.++++|++
T Consensus 361 i~~ll~d~~ 369 (396)
T 3dzc_A 361 LSLLLTDPQ 369 (396)
T ss_dssp HHHHHHCHH
T ss_pred HHHHHcCHH
Confidence 999999883
No 34
>3fro_A GLGA glycogen synthase; glycosyltransferase family, UDP/ADP-glucose-glycogen synthas rossman folds, transferase; HET: NHF; 2.50A {Pyrococcus abyssi} SCOP: c.87.1.8 PDB: 2bis_A* 3l01_A*
Probab=99.06 E-value=4.6e-07 Score=89.62 Aligned_cols=146 Identities=13% Similarity=0.068 Sum_probs=90.5
Q ss_pred eEEeccCCCc-C-CCHHHHHHHHHHHHh----CCCcEEEEEeCCCCccccCCChhHHhhccCCCeEecCCCCHHh---hh
Q 044031 272 VVFLCFGSRG-T-FSAPQLKEIAIGLER----SNQRFLWVVRNPSNAAEAELPEGFLERTKERGLVVKSWAPQST---IL 342 (468)
Q Consensus 272 ~v~vs~GS~~-~-~~~~~~~~~~~al~~----~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~pq~~---il 342 (468)
.+++..|++. . ...+.+.+.+..+.. .+.++++ +|.........+ ..+..... +.+++.+|+++.+ ++
T Consensus 252 ~~i~~~G~~~~~~Kg~~~li~a~~~l~~~~~~~~~~l~i-~G~g~~~~~~~l-~~~~~~~~-~~~~~~g~~~~~~~~~~~ 328 (439)
T 3fro_A 252 VTFMFIGRFDRGQKGVDVLLKAIEILSSKKEFQEMRFII-IGKGDPELEGWA-RSLEEKHG-NVKVITEMLSREFVRELY 328 (439)
T ss_dssp EEEEEECCSSCTTBCHHHHHHHHHHHHTSGGGGGEEEEE-ECCCCHHHHHHH-HHHHHHCT-TEEEECSCCCHHHHHHHH
T ss_pred cEEEEEcccccccccHHHHHHHHHHHHhcccCCCeEEEE-EcCCChhHHHHH-HHHHhhcC-CEEEEcCCCCHHHHHHHH
Confidence 7777788886 2 234555555555544 3455544 444310000000 11112222 4566778899864 57
Q ss_pred CccCcceEEec----CCcchHHHHHHhCCcEEecccccchhhHHHHHHhhcceeeeeccCCcccccCCCCccccHHHHHH
Q 044031 343 GHESVGGFVTH----CGWSSVVEAVTYGVPMIAWPLYAEQFLNSVALVQEMKVAMPMFLNGEEETIGNGEGVVSAERVEE 418 (468)
Q Consensus 343 ~~~~~~~~ith----gG~~s~~eal~~GvP~v~~P~~~DQ~~na~~~~~~~g~g~~~~~~~~~~~~~~~~~~~~~~~l~~ 418 (468)
..+++ +|.- |-.+++.||+++|+|+|+-.. ......+ +. |.|..++. -+.+++.+
T Consensus 329 ~~adv--~v~ps~~e~~~~~~~EAma~G~Pvi~s~~----~~~~e~~-~~-~~g~~~~~-------------~d~~~la~ 387 (439)
T 3fro_A 329 GSVDF--VIIPSYFEPFGLVALEAMCLGAIPIASAV----GGLRDII-TN-ETGILVKA-------------GDPGELAN 387 (439)
T ss_dssp TTCSE--EEECBSCCSSCHHHHHHHHTTCEEEEESS----THHHHHC-CT-TTCEEECT-------------TCHHHHHH
T ss_pred HHCCE--EEeCCCCCCccHHHHHHHHCCCCeEEcCC----CCcceeE-Ec-CceEEeCC-------------CCHHHHHH
Confidence 77777 5522 334689999999999999754 3344444 34 78888874 47899999
Q ss_pred HHHHHhc-Cch-hHHHHHHHHHHHH
Q 044031 419 RVRELMM-GSE-GKALRERSLEMRM 441 (468)
Q Consensus 419 av~~~l~-~~~-~~~~~~~a~~l~~ 441 (468)
+|.++++ |++ .+++.+++++..+
T Consensus 388 ~i~~ll~~~~~~~~~~~~~~~~~~~ 412 (439)
T 3fro_A 388 AILKALELSRSDLSKFRENCKKRAM 412 (439)
T ss_dssp HHHHHHHHTTTTTHHHHHHHHHHHH
T ss_pred HHHHHHhcCHHHHHHHHHHHHHHHh
Confidence 9999998 776 6778777776553
No 35
>2r60_A Glycosyl transferase, group 1; rossmann-fold; 1.80A {Halothermothrix orenii} PDB: 2r66_A* 2r68_A*
Probab=99.03 E-value=4.9e-08 Score=98.79 Aligned_cols=147 Identities=12% Similarity=0.017 Sum_probs=88.8
Q ss_pred eEEeccCCCcCCCHHHHHHHHHHHHhCC-----CcEEEEEeCCCCc--cccCC-------ChhHHhhc----cCCCeEec
Q 044031 272 VVFLCFGSRGTFSAPQLKEIAIGLERSN-----QRFLWVVRNPSNA--AEAEL-------PEGFLERT----KERGLVVK 333 (468)
Q Consensus 272 ~v~vs~GS~~~~~~~~~~~~~~al~~~~-----~~~l~~~~~~~~~--~~~~~-------~~~~~~~~----~~~~~~v~ 333 (468)
.+++..|++. ..+.+..++++++... ...++.+|...+. ....+ -+.+.+.. ..+++.+.
T Consensus 263 ~~i~~vGrl~--~~Kg~~~li~a~~~l~~~~~~~~~l~i~G~~~~~~~~y~~l~~~~~~y~~~l~~~~~~~~l~~~V~~~ 340 (499)
T 2r60_A 263 PAIIASSRLD--QKKNHYGLVEAYVQNKELQDKANLVLTLRGIENPFEDYSRAGQEEKEILGKIIELIDNNDCRGKVSMF 340 (499)
T ss_dssp CEEEECSCCC--GGGCHHHHHHHHHTCHHHHHHCEEEEEESSCSBTTTBCTTSCHHHHHHHHHHHHHHHHTTCBTTEEEE
T ss_pred cEEEEeecCc--cccCHHHHHHHHHHHHHhCCCceEEEEECCCCCcccccccccccchHHHHHHHHHHHhcCCCceEEEC
Confidence 5666778774 2334556667766542 2245566652100 00000 11222111 24578888
Q ss_pred CCCCHHh---hhCcc----CcceEEec----CCcchHHHHHHhCCcEEecccccchhhHHHHHHhhcceeeeeccCCccc
Q 044031 334 SWAPQST---ILGHE----SVGGFVTH----CGWSSVVEAVTYGVPMIAWPLYAEQFLNSVALVQEMKVAMPMFLNGEEE 402 (468)
Q Consensus 334 ~~~pq~~---il~~~----~~~~~ith----gG~~s~~eal~~GvP~v~~P~~~DQ~~na~~~~~~~g~g~~~~~~~~~~ 402 (468)
+++|+.+ ++..+ ++ +|.- |-..++.||+++|+|+|+.... .....+. .-..|+.++.
T Consensus 341 G~v~~~~~~~~~~~a~~~~dv--~v~pS~~Eg~~~~~lEAma~G~PvI~s~~~----g~~e~v~-~~~~g~l~~~----- 408 (499)
T 2r60_A 341 PLNSQQELAGCYAYLASKGSV--FALTSFYEPFGLAPVEAMASGLPAVVTRNG----GPAEILD-GGKYGVLVDP----- 408 (499)
T ss_dssp ECCSHHHHHHHHHHHHHTTCE--EEECCSCBCCCSHHHHHHHTTCCEEEESSB----HHHHHTG-GGTSSEEECT-----
T ss_pred CCCCHHHHHHHHHhcCcCCCE--EEECcccCCCCcHHHHHHHcCCCEEEecCC----CHHHHhc-CCceEEEeCC-----
Confidence 9998664 56667 66 6532 2346899999999999998642 3444443 3247888874
Q ss_pred ccCCCCccccHHHHHHHHHHHhcCch-hHHHHHHHHHHH
Q 044031 403 TIGNGEGVVSAERVEERVRELMMGSE-GKALRERSLEMR 440 (468)
Q Consensus 403 ~~~~~~~~~~~~~l~~av~~~l~~~~-~~~~~~~a~~l~ 440 (468)
-+.+++.++|.++++|++ .+++.+++++..
T Consensus 409 --------~d~~~la~~i~~ll~~~~~~~~~~~~a~~~~ 439 (499)
T 2r60_A 409 --------EDPEDIARGLLKAFESEETWSAYQEKGKQRV 439 (499)
T ss_dssp --------TCHHHHHHHHHHHHSCHHHHHHHHHHHHHHH
T ss_pred --------CCHHHHHHHHHHHHhCHHHHHHHHHHHHHHH
Confidence 478899999999999885 456666665543
No 36
>3beo_A UDP-N-acetylglucosamine 2-epimerase; UDP-GLCNAC, allosteric, regulation, isomerase; HET: UD1 UDP; 1.70A {Bacillus anthracis} PDB: 1o6c_A
Probab=98.96 E-value=7.4e-08 Score=93.42 Aligned_cols=132 Identities=13% Similarity=0.135 Sum_probs=79.8
Q ss_pred CCceEEeccCCCcCCCHHHHHHHHHHHHh-----CCCcEEEEEeCCCCccccCCChhHHhhcc-CCCeEecCCCCHH---
Q 044031 269 SGSVVFLCFGSRGTFSAPQLKEIAIGLER-----SNQRFLWVVRNPSNAAEAELPEGFLERTK-ERGLVVKSWAPQS--- 339 (468)
Q Consensus 269 ~~~~v~vs~GS~~~~~~~~~~~~~~al~~-----~~~~~l~~~~~~~~~~~~~~~~~~~~~~~-~~~~~v~~~~pq~--- 339 (468)
++++++++.|...... +.+..++++++. .+..+++ +...+ ..+-+.+.+... .+++.+.+++++.
T Consensus 204 ~~~~vl~~~gr~~~~~-K~~~~li~a~~~l~~~~~~~~~i~--~~g~~---~~~~~~~~~~~~~~~~v~~~g~~~~~~~~ 277 (375)
T 3beo_A 204 NNRLVLMTAHRRENLG-EPMRNMFRAIKRLVDKHEDVQVVY--PVHMN---PVVRETANDILGDYGRIHLIEPLDVIDFH 277 (375)
T ss_dssp TSEEEEEECCCGGGTT-HHHHHHHHHHHHHHHHCTTEEEEE--ECCSC---HHHHHHHHHHHTTCTTEEEECCCCHHHHH
T ss_pred CCCeEEEEecccccch-hHHHHHHHHHHHHHhhCCCeEEEE--eCCCC---HHHHHHHHHHhhccCCEEEeCCCCHHHHH
Confidence 3446777777764322 234445555543 2445444 32200 001111112112 2578887777754
Q ss_pred hhhCccCcceEEecCCcchHHHHHHhCCcEEecccccchhhHHHHHHhhcceeeeeccCCcccccCCCCccccHHHHHHH
Q 044031 340 TILGHESVGGFVTHCGWSSVVEAVTYGVPMIAWPLYAEQFLNSVALVQEMKVAMPMFLNGEEETIGNGEGVVSAERVEER 419 (468)
Q Consensus 340 ~il~~~~~~~~ithgG~~s~~eal~~GvP~v~~P~~~DQ~~na~~~~~~~g~g~~~~~~~~~~~~~~~~~~~~~~~l~~a 419 (468)
.++..+++ ||+..| +.+.||+++|+|+|+....+..+ ..+ +. |.|+.++ .+.+++.++
T Consensus 278 ~~~~~ad~--~v~~sg-~~~lEA~a~G~Pvi~~~~~~~~~---e~v-~~-g~g~~v~--------------~d~~~la~~ 335 (375)
T 3beo_A 278 NVAARSYL--MLTDSG-GVQEEAPSLGVPVLVLRDTTERP---EGI-EA-GTLKLAG--------------TDEETIFSL 335 (375)
T ss_dssp HHHHTCSE--EEECCH-HHHHHHHHHTCCEEECSSCCSCH---HHH-HT-TSEEECC--------------SCHHHHHHH
T ss_pred HHHHhCcE--EEECCC-ChHHHHHhcCCCEEEecCCCCCc---eee-cC-CceEEcC--------------CCHHHHHHH
Confidence 56777777 888874 55889999999999985433332 234 45 7887775 377899999
Q ss_pred HHHHhcCch
Q 044031 420 VRELMMGSE 428 (468)
Q Consensus 420 v~~~l~~~~ 428 (468)
|.++++|++
T Consensus 336 i~~ll~~~~ 344 (375)
T 3beo_A 336 ADELLSDKE 344 (375)
T ss_dssp HHHHHHCHH
T ss_pred HHHHHhChH
Confidence 999999883
No 37
>2iuy_A Avigt4, glycosyltransferase; antibiotics, family GT-4, avilamycin A; HET: MES; 2.1A {Streptomyces viridochromogenes} PDB: 2iv3_A*
Probab=98.82 E-value=1.1e-07 Score=91.02 Aligned_cols=128 Identities=11% Similarity=0.004 Sum_probs=78.7
Q ss_pred EEeccCCCcCCCHHHHHHHHHHHHhCCCcEEEEEeCCCCccccCCChhHHhhccCCCeEecCCCCHH---hhhCccCcce
Q 044031 273 VFLCFGSRGTFSAPQLKEIAIGLERSNQRFLWVVRNPSNAAEAELPEGFLERTKERGLVVKSWAPQS---TILGHESVGG 349 (468)
Q Consensus 273 v~vs~GS~~~~~~~~~~~~~~al~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~pq~---~il~~~~~~~ 349 (468)
+++..|+.. ..+.+..++++++..+.+++++ |.... ...+ +.+..... .++.+.+|+++. .++..+++-+
T Consensus 164 ~i~~vG~~~--~~Kg~~~li~a~~~~~~~l~i~-G~g~~--~~~l-~~~~~~~~-~~v~~~g~~~~~~l~~~~~~adv~v 236 (342)
T 2iuy_A 164 FLLFMGRVS--PHKGALEAAAFAHACGRRLVLA-GPAWE--PEYF-DEITRRYG-STVEPIGEVGGERRLDLLASAHAVL 236 (342)
T ss_dssp CEEEESCCC--GGGTHHHHHHHHHHHTCCEEEE-SCCCC--HHHH-HHHHHHHT-TTEEECCCCCHHHHHHHHHHCSEEE
T ss_pred EEEEEeccc--cccCHHHHHHHHHhcCcEEEEE-eCccc--HHHH-HHHHHHhC-CCEEEeccCCHHHHHHHHHhCCEEE
Confidence 444467764 3344666777777777776654 44310 0001 11222222 689899999976 6788888822
Q ss_pred EEec-----------CC-cchHHHHHHhCCcEEecccccchhhHHHHHHhh-cceeeeeccCCcccccCCCCccccHHHH
Q 044031 350 FVTH-----------CG-WSSVVEAVTYGVPMIAWPLYAEQFLNSVALVQE-MKVAMPMFLNGEEETIGNGEGVVSAERV 416 (468)
Q Consensus 350 ~ith-----------gG-~~s~~eal~~GvP~v~~P~~~DQ~~na~~~~~~-~g~g~~~~~~~~~~~~~~~~~~~~~~~l 416 (468)
+-++ -| .+++.||+++|+|+|+.... .+...+.+. -+.|+.++ .+.+++
T Consensus 237 ~ps~~~~~~~~~~~~E~~~~~~~EAma~G~PvI~s~~~----~~~e~~~~~~~~~g~~~~--------------~d~~~l 298 (342)
T 2iuy_A 237 AMSQAVTGPWGGIWCEPGATVVSEAAVSGTPVVGTGNG----CLAEIVPSVGEVVGYGTD--------------FAPDEA 298 (342)
T ss_dssp ECCCCCCCTTCSCCCCCCCHHHHHHHHTTCCEEECCTT----THHHHGGGGEEECCSSSC--------------CCHHHH
T ss_pred ECCcccccccccccccCccHHHHHHHhcCCCEEEcCCC----ChHHHhcccCCCceEEcC--------------CCHHHH
Confidence 2233 23 45899999999999998763 344444320 24555554 267889
Q ss_pred HHHHHHHhc
Q 044031 417 EERVRELMM 425 (468)
Q Consensus 417 ~~av~~~l~ 425 (468)
.++|.++++
T Consensus 299 ~~~i~~l~~ 307 (342)
T 2iuy_A 299 RRTLAGLPA 307 (342)
T ss_dssp HHHHHTSCC
T ss_pred HHHHHHHHH
Confidence 999999886
No 38
>4hwg_A UDP-N-acetylglucosamine 2-epimerase; ssgcid, structural genomics, seattle structural genomics center for infectious disease, isomerase; 2.00A {Rickettsia bellii}
Probab=98.78 E-value=4.7e-08 Score=95.12 Aligned_cols=156 Identities=12% Similarity=0.063 Sum_probs=95.4
Q ss_pred CceEEeccCCCcCCCH-HHHHHHHHHHHhC----CCcEEEEEeCCCCccccCCChhHHhh---c-cCCCeEecCCCCH--
Q 044031 270 GSVVFLCFGSRGTFSA-PQLKEIAIGLERS----NQRFLWVVRNPSNAAEAELPEGFLER---T-KERGLVVKSWAPQ-- 338 (468)
Q Consensus 270 ~~~v~vs~GS~~~~~~-~~~~~~~~al~~~----~~~~l~~~~~~~~~~~~~~~~~~~~~---~-~~~~~~v~~~~pq-- 338 (468)
++.|+++.|....... +.+..++++++.. +..+|+..+.. +.+.+.+. . ..+++.+.+.+++
T Consensus 203 ~~~iLvt~hr~e~~~~~~~l~~ll~al~~l~~~~~~~vv~p~~p~-------~~~~l~~~~~~~~~~~~v~l~~~lg~~~ 275 (385)
T 4hwg_A 203 KQYFLISSHREENVDVKNNLKELLNSLQMLIKEYNFLIIFSTHPR-------TKKRLEDLEGFKELGDKIRFLPAFSFTD 275 (385)
T ss_dssp TSEEEEEECCC-----CHHHHHHHHHHHHHHHHHCCEEEEEECHH-------HHHHHHTSGGGGGTGGGEEECCCCCHHH
T ss_pred CCEEEEEeCCchhcCcHHHHHHHHHHHHHHHhcCCeEEEEECChH-------HHHHHHHHHHHhcCCCCEEEEcCCCHHH
Confidence 4588888887643332 4455666666542 67788765421 10111111 1 1346777666664
Q ss_pred -HhhhCccCcceEEecCCcchHHHHHHhCCcEEecccccchhhHHHHHHhhcceeeeeccCCcccccCCCCccccHHHHH
Q 044031 339 -STILGHESVGGFVTHCGWSSVVEAVTYGVPMIAWPLYAEQFLNSVALVQEMKVAMPMFLNGEEETIGNGEGVVSAERVE 417 (468)
Q Consensus 339 -~~il~~~~~~~~ithgG~~s~~eal~~GvP~v~~P~~~DQ~~na~~~~~~~g~g~~~~~~~~~~~~~~~~~~~~~~~l~ 417 (468)
..++.++++ +||-.|. .+.||.++|+|+|.++...+.+. .+ +. |.++.+. .+.++|.
T Consensus 276 ~~~l~~~adl--vvt~SGg-v~~EA~alG~Pvv~~~~~ter~e---~v-~~-G~~~lv~--------------~d~~~i~ 333 (385)
T 4hwg_A 276 YVKLQMNAFC--ILSDSGT-ITEEASILNLPALNIREAHERPE---GM-DA-GTLIMSG--------------FKAERVL 333 (385)
T ss_dssp HHHHHHHCSE--EEECCTT-HHHHHHHTTCCEEECSSSCSCTH---HH-HH-TCCEECC--------------SSHHHHH
T ss_pred HHHHHHhCcE--EEECCcc-HHHHHHHcCCCEEEcCCCccchh---hh-hc-CceEEcC--------------CCHHHHH
Confidence 457878887 9999885 47899999999999987554222 24 45 8776665 4788999
Q ss_pred HHHHHHhcCch-hHHHHHHHHHHHHHHHHhh-cCCCCCChHHHHHHHHH
Q 044031 418 ERVRELMMGSE-GKALRERSLEMRMMAATAW-NNNDGGSSFTAFSNLFD 464 (468)
Q Consensus 418 ~av~~~l~~~~-~~~~~~~a~~l~~~~~~a~-~~~~~g~~~~~~~~~~~ 464 (468)
+++.++++|++ .+.|++++.. . . +++++.+.++.+.+
T Consensus 334 ~ai~~ll~d~~~~~~m~~~~~~--------~~g--~g~aa~rI~~~l~~ 372 (385)
T 4hwg_A 334 QAVKTITEEHDNNKRTQGLVPD--------YNE--AGLVSKKILRIVLS 372 (385)
T ss_dssp HHHHHHHTTCBTTBCCSCCCHH--------HHT--CCCHHHHHHHHHHH
T ss_pred HHHHHHHhChHHHHHhhccCCC--------CCC--CChHHHHHHHHHHH
Confidence 99999999874 2334333321 2 3 56666655554433
No 39
>2x6q_A Trehalose-synthase TRET; biosynthetic protein; 2.20A {Pyrococcus horikoshii} PDB: 2x6r_A 2xa1_A 2xa2_A* 2xa9_A* 2xmp_A*
Probab=98.71 E-value=5.6e-06 Score=81.38 Aligned_cols=146 Identities=15% Similarity=0.061 Sum_probs=83.2
Q ss_pred eEEeccCCCcC-CCHHHHHHHHHHHHh--CCCcEEEEEeCCCC-cc-ccCCChhHHhhc-cCCCeEecCCCC---HH---
Q 044031 272 VVFLCFGSRGT-FSAPQLKEIAIGLER--SNQRFLWVVRNPSN-AA-EAELPEGFLERT-KERGLVVKSWAP---QS--- 339 (468)
Q Consensus 272 ~v~vs~GS~~~-~~~~~~~~~~~al~~--~~~~~l~~~~~~~~-~~-~~~~~~~~~~~~-~~~~~~v~~~~p---q~--- 339 (468)
.+++..|.+.. ...+.+.+.+..+.. .+.+++++-.+..+ .+ ...+ ..+.... ...++.+.+|++ +.
T Consensus 232 ~~i~~vGrl~~~Kg~~~li~a~~~l~~~~~~~~l~i~G~g~~~~~~~~~~l-~~~~~~~~~~~~V~~~G~~~~~~~~~~~ 310 (416)
T 2x6q_A 232 PIITQVSRFDPWKGIFDVIEIYRKVKEKIPGVQLLLVGVMAHDDPEGWIYF-EKTLRKIGEDYDVKVLTNLIGVHAREVN 310 (416)
T ss_dssp CEEEEECCCCTTSCHHHHHHHHHHHHHHCTTCEEEEEECCCTTCHHHHHHH-HHHHHHHTTCTTEEEEEGGGTCCHHHHH
T ss_pred cEEEEEeccccccCHHHHHHHHHHHHHhCCCeEEEEEecCcccchhHHHHH-HHHHHHhCCCCcEEEecccCCCCHHHHH
Confidence 56666787753 233444444444433 25666655433210 00 0000 1111121 246788877665 33
Q ss_pred hhhCccCcceEEecC----CcchHHHHHHhCCcEEecccccchhhHHHHHHhhcceeeeeccCCcccccCCCCccccHHH
Q 044031 340 TILGHESVGGFVTHC----GWSSVVEAVTYGVPMIAWPLYAEQFLNSVALVQEMKVAMPMFLNGEEETIGNGEGVVSAER 415 (468)
Q Consensus 340 ~il~~~~~~~~ithg----G~~s~~eal~~GvP~v~~P~~~DQ~~na~~~~~~~g~g~~~~~~~~~~~~~~~~~~~~~~~ 415 (468)
.++..+++ +|.-. ..+++.||+++|+|+|+.+. ..+...+. .-+.|+.++ +.++
T Consensus 311 ~~~~~ad~--~v~ps~~E~~~~~~lEAma~G~PvI~~~~----~g~~e~i~-~~~~g~l~~---------------d~~~ 368 (416)
T 2x6q_A 311 AFQRASDV--ILQMSIREGFGLTVTEAMWKGKPVIGRAV----GGIKFQIV-DGETGFLVR---------------DANE 368 (416)
T ss_dssp HHHHHCSE--EEECCSSCSSCHHHHHHHHTTCCEEEESC----HHHHHHCC-BTTTEEEES---------------SHHH
T ss_pred HHHHhCCE--EEECCCcCCCccHHHHHHHcCCCEEEccC----CCChhhee-cCCCeEEEC---------------CHHH
Confidence 46667777 66543 45689999999999999775 23444443 324565553 5678
Q ss_pred HHHHHHHHhcCch-hHHHHHHHHHHH
Q 044031 416 VEERVRELMMGSE-GKALRERSLEMR 440 (468)
Q Consensus 416 l~~av~~~l~~~~-~~~~~~~a~~l~ 440 (468)
+.++|.++++|++ .+++.+++++..
T Consensus 369 la~~i~~ll~~~~~~~~~~~~a~~~~ 394 (416)
T 2x6q_A 369 AVEVVLYLLKHPEVSKEMGAKAKERV 394 (416)
T ss_dssp HHHHHHHHHHCHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHhCHHHHHHHHHHHHHHH
Confidence 9999999999885 455666665543
No 40
>3s28_A Sucrose synthase 1; glycosyltransferase, sucrose metabolism, sugar donar complex rossmann fold, GT-B fold, glycosyltansferase, UDP-glucose; HET: UDP LCN NHF; 2.80A {Arabidopsis thaliana} PDB: 3s27_A* 3s29_A*
Probab=98.57 E-value=4.1e-06 Score=88.54 Aligned_cols=94 Identities=15% Similarity=0.107 Sum_probs=60.5
Q ss_pred CCCeEecCCC----CHHhhhC----ccCcceEEec----CCcchHHHHHHhCCcEEecccccchhhHHHHHHhhcceeee
Q 044031 327 ERGLVVKSWA----PQSTILG----HESVGGFVTH----CGWSSVVEAVTYGVPMIAWPLYAEQFLNSVALVQEMKVAMP 394 (468)
Q Consensus 327 ~~~~~v~~~~----pq~~il~----~~~~~~~ith----gG~~s~~eal~~GvP~v~~P~~~DQ~~na~~~~~~~g~g~~ 394 (468)
.+++.+.++. |+.++.. .+++ ||.- +-..++.||+++|+|+|+-.. ......+.+. ..|+.
T Consensus 639 ~~~V~flG~~~~~v~~~eL~~~~~~aaDv--fV~PS~~EgfglvllEAMA~G~PVIasd~----GG~~EiV~dg-~~Gll 711 (816)
T 3s28_A 639 NGQFRWISSQMDRVRNGELYRYICDTKGA--FVQPALYEAFGLTVVEAMTCGLPTFATCK----GGPAEIIVHG-KSGFH 711 (816)
T ss_dssp BBBEEEECCCCCHHHHHHHHHHHHHTTCE--EEECCSCBSSCHHHHHHHHTTCCEEEESS----BTHHHHCCBT-TTBEE
T ss_pred CCcEEEccCccccCCHHHHHHHHHhcCeE--EEECCCccCccHHHHHHHHcCCCEEEeCC----CChHHHHccC-CcEEE
Confidence 3567776644 4455443 3345 6632 234689999999999999743 3344444332 57888
Q ss_pred eccCCcccccCCCCccccHHHHHHHHHHHh----cCch-hHHHHHHHHHHH
Q 044031 395 MFLNGEEETIGNGEGVVSAERVEERVRELM----MGSE-GKALRERSLEMR 440 (468)
Q Consensus 395 ~~~~~~~~~~~~~~~~~~~~~l~~av~~~l----~~~~-~~~~~~~a~~l~ 440 (468)
++. -+.++++++|.+++ .|++ .+++.+++++..
T Consensus 712 v~p-------------~D~e~LA~aI~~lL~~Ll~d~~~~~~m~~~ar~~a 749 (816)
T 3s28_A 712 IDP-------------YHGDQAADTLADFFTKCKEDPSHWDEISKGGLQRI 749 (816)
T ss_dssp ECT-------------TSHHHHHHHHHHHHHHHHHCTHHHHHHHHHHHHHH
T ss_pred eCC-------------CCHHHHHHHHHHHHHHhccCHHHHHHHHHHHHHHH
Confidence 874 47788888887666 7875 566666665544
No 41
>2f9f_A First mannosyl transferase (WBAZ-1); alpha-beta protein, structural genomics, PSI, protein struct initiative; 1.80A {Archaeoglobus fulgidus} SCOP: c.87.1.8
Probab=98.45 E-value=1.3e-06 Score=75.10 Aligned_cols=131 Identities=7% Similarity=0.030 Sum_probs=84.3
Q ss_pred eEEeccCCCcCCCHHHHHHHHHHHHhC-CCcEEEEEeCCCCccccCCChhHH--hhccCCCeEecCCCCH---HhhhCcc
Q 044031 272 VVFLCFGSRGTFSAPQLKEIAIGLERS-NQRFLWVVRNPSNAAEAELPEGFL--ERTKERGLVVKSWAPQ---STILGHE 345 (468)
Q Consensus 272 ~v~vs~GS~~~~~~~~~~~~~~al~~~-~~~~l~~~~~~~~~~~~~~~~~~~--~~~~~~~~~v~~~~pq---~~il~~~ 345 (468)
.+++..|+.. ..+.+..++++++.. +.+++++-.... ...+-+-.. .....+++.+.+|+++ ..++..+
T Consensus 24 ~~i~~~G~~~--~~Kg~~~li~a~~~l~~~~l~i~G~~~~---~~~l~~~~~~~~~~l~~~v~~~g~~~~~e~~~~~~~a 98 (177)
T 2f9f_A 24 DFWLSVNRIY--PEKRIELQLEVFKKLQDEKLYIVGWFSK---GDHAERYARKIMKIAPDNVKFLGSVSEEELIDLYSRC 98 (177)
T ss_dssp SCEEEECCSS--GGGTHHHHHHHHHHCTTSCEEEEBCCCT---TSTHHHHHHHHHHHSCTTEEEEESCCHHHHHHHHHHC
T ss_pred CEEEEEeccc--cccCHHHHHHHHHhCCCcEEEEEecCcc---HHHHHHHHHhhhcccCCcEEEeCCCCHHHHHHHHHhC
Confidence 4555667775 234466677777775 566665433321 111111111 1123458888899997 4678788
Q ss_pred CcceEEe---cCCcc-hHHHHHHhCCcEEecccccchhhHHHHHHhhcceeeeeccCCcccccCCCCccccHHHHHHHHH
Q 044031 346 SVGGFVT---HCGWS-SVVEAVTYGVPMIAWPLYAEQFLNSVALVQEMKVAMPMFLNGEEETIGNGEGVVSAERVEERVR 421 (468)
Q Consensus 346 ~~~~~it---hgG~~-s~~eal~~GvP~v~~P~~~DQ~~na~~~~~~~g~g~~~~~~~~~~~~~~~~~~~~~~~l~~av~ 421 (468)
++ +|. +-|++ ++.||+++|+|+|+... ..+...+. .-+.|+.+ . -+.+++.++|.
T Consensus 99 di--~v~ps~~e~~~~~~~Eama~G~PvI~~~~----~~~~e~i~-~~~~g~~~-~-------------~d~~~l~~~i~ 157 (177)
T 2f9f_A 99 KG--LLCTAKDEDFGLTPIEAMASGKPVIAVNE----GGFKETVI-NEKTGYLV-N-------------ADVNEIIDAMK 157 (177)
T ss_dssp SE--EEECCSSCCSCHHHHHHHHTTCCEEEESS----HHHHHHCC-BTTTEEEE-C-------------SCHHHHHHHHH
T ss_pred CE--EEeCCCcCCCChHHHHHHHcCCcEEEeCC----CCHHHHhc-CCCccEEe-C-------------CCHHHHHHHHH
Confidence 87 554 33444 89999999999999764 44445553 32577776 4 57899999999
Q ss_pred HHhcCch
Q 044031 422 ELMMGSE 428 (468)
Q Consensus 422 ~~l~~~~ 428 (468)
++++|++
T Consensus 158 ~l~~~~~ 164 (177)
T 2f9f_A 158 KVSKNPD 164 (177)
T ss_dssp HHHHCTT
T ss_pred HHHhCHH
Confidence 9998874
No 42
>1rzu_A Glycogen synthase 1; glycosyl-transferase, GT-B fold, rossmann fold, ADP-binding, transferase; HET: ADP; 2.30A {Agrobacterium tumefaciens} SCOP: c.87.1.8 PDB: 1rzv_A
Probab=98.37 E-value=9.1e-05 Score=74.24 Aligned_cols=139 Identities=7% Similarity=0.033 Sum_probs=81.0
Q ss_pred eEEeccCCCcC-CCHHHHHHHHHHHHhCCCcEEEEEeCCCCccccCCChhHHhhc--cCCCeE-ecCCCCHH---hhhCc
Q 044031 272 VVFLCFGSRGT-FSAPQLKEIAIGLERSNQRFLWVVRNPSNAAEAELPEGFLERT--KERGLV-VKSWAPQS---TILGH 344 (468)
Q Consensus 272 ~v~vs~GS~~~-~~~~~~~~~~~al~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~--~~~~~~-v~~~~pq~---~il~~ 344 (468)
.+++..|++.. ...+.+.+.+..+...+.+++++ |... ...-+.+.+.. .+.+++ +.++ ++. .++..
T Consensus 292 ~~i~~vGrl~~~Kg~~~li~a~~~l~~~~~~l~iv-G~g~----~~~~~~l~~~~~~~~~~v~~~~g~-~~~~~~~~~~~ 365 (485)
T 1rzu_A 292 PLFCVISRLTWQKGIDLMAEAVDEIVSLGGRLVVL-GAGD----VALEGALLAAASRHHGRVGVAIGY-NEPLSHLMQAG 365 (485)
T ss_dssp CEEEEESCBSTTTTHHHHHTTHHHHHHTTCEEEEE-ECBC----HHHHHHHHHHHHHTTTTEEEEESC-CHHHHHHHHHH
T ss_pred eEEEEEccCccccCHHHHHHHHHHHHhcCceEEEE-eCCc----hHHHHHHHHHHHhCCCcEEEecCC-CHHHHHHHHhc
Confidence 56777788853 22344444444444446676654 4320 00011122111 135675 5677 543 56777
Q ss_pred cCcceEEe----cCCcchHHHHHHhCCcEEecccccchhhHHHHHHhhc---------ceeeeeccCCcccccCCCCccc
Q 044031 345 ESVGGFVT----HCGWSSVVEAVTYGVPMIAWPLYAEQFLNSVALVQEM---------KVAMPMFLNGEEETIGNGEGVV 411 (468)
Q Consensus 345 ~~~~~~it----hgG~~s~~eal~~GvP~v~~P~~~DQ~~na~~~~~~~---------g~g~~~~~~~~~~~~~~~~~~~ 411 (468)
+++ ||. -+-..+++||+++|+|+|+.... -....+ +.- +.|+.++. -
T Consensus 366 adv--~v~pS~~E~~~~~~lEAma~G~PvI~s~~g----g~~e~v-~~~~~~~~~~~~~~G~l~~~-------------~ 425 (485)
T 1rzu_A 366 CDA--IIIPSRFEPCGLTQLYALRYGCIPVVARTG----GLADTV-IDANHAALASKAATGVQFSP-------------V 425 (485)
T ss_dssp CSE--EEECCSCCSSCSHHHHHHHHTCEEEEESSH----HHHHHC-CBCCHHHHHTTCCCBEEESS-------------C
T ss_pred CCE--EEECcccCCCCHHHHHHHHCCCCEEEeCCC----Chhhee-cccccccccccCCcceEeCC-------------C
Confidence 887 663 23356899999999999997652 333333 331 46777763 4
Q ss_pred cHHHHHHHHHHHh---cCch-hHHHHHHH
Q 044031 412 SAERVEERVRELM---MGSE-GKALRERS 436 (468)
Q Consensus 412 ~~~~l~~av~~~l---~~~~-~~~~~~~a 436 (468)
+.+++.++|.+++ +|++ .+++.+++
T Consensus 426 d~~~la~~i~~ll~~~~~~~~~~~~~~~~ 454 (485)
T 1rzu_A 426 TLDGLKQAIRRTVRYYHDPKLWTQMQKLG 454 (485)
T ss_dssp SHHHHHHHHHHHHHHHTCHHHHHHHHHHH
T ss_pred CHHHHHHHHHHHHHHhCCHHHHHHHHHHH
Confidence 7889999999999 6774 34444444
No 43
>2vsy_A XCC0866; transferase, glycosyl transferase, GT-B, OGT, protein O-GLCN; HET: NHE; 2.10A {Xanthomonas campestris PV} PDB: 2jlb_A* 2xgm_A* 2xgo_A* 2xgs_A* 2vsn_A*
Probab=98.35 E-value=0.00036 Score=71.40 Aligned_cols=95 Identities=14% Similarity=0.092 Sum_probs=63.7
Q ss_pred CCeEecCCCCHH---hhhCccCcceEE--e-cCCcchHHHHHHhCCcEEecccccchhhH-HHHHHhhcceeeeeccCCc
Q 044031 328 RGLVVKSWAPQS---TILGHESVGGFV--T-HCGWSSVVEAVTYGVPMIAWPLYAEQFLN-SVALVQEMKVAMPMFLNGE 400 (468)
Q Consensus 328 ~~~~v~~~~pq~---~il~~~~~~~~i--t-hgG~~s~~eal~~GvP~v~~P~~~DQ~~n-a~~~~~~~g~g~~~~~~~~ 400 (468)
+++++.+++|+. .++..+++ || + .|+.+++.||+++|+|+|++|...-.-.. +..+. ..|+.-.+.
T Consensus 434 ~~v~~~g~~~~~~~~~~~~~adv--~v~ps~~~~g~~~lEAma~G~Pvv~~~g~~~~s~~~~~~l~-~~g~~e~v~---- 506 (568)
T 2vsy_A 434 QRLVFMPKLPHPQYLARYRHADL--FLDTHPYNAHTTASDALWTGCPVLTTPGETFAARVAGSLNH-HLGLDEMNV---- 506 (568)
T ss_dssp GGEEEECCCCHHHHHHHGGGCSE--EECCSSSCCSHHHHHHHHTTCCEEBCCCSSGGGSHHHHHHH-HHTCGGGBC----
T ss_pred hHEEeeCCCCHHHHHHHHhcCCE--EeeCCCCCCcHHHHHHHhCCCCEEeccCCCchHHHHHHHHH-HCCChhhhc----
Confidence 578888999855 45777777 65 2 25567899999999999998753211111 33343 335554443
Q ss_pred ccccCCCCccccHHHHHHHHHHHhcCch-hHHHHHHHHHH
Q 044031 401 EETIGNGEGVVSAERVEERVRELMMGSE-GKALRERSLEM 439 (468)
Q Consensus 401 ~~~~~~~~~~~~~~~l~~av~~~l~~~~-~~~~~~~a~~l 439 (468)
-+.+++.+++.++++|++ .++|++++++.
T Consensus 507 ----------~~~~~la~~i~~l~~~~~~~~~~~~~~~~~ 536 (568)
T 2vsy_A 507 ----------ADDAAFVAKAVALASDPAALTALHARVDVL 536 (568)
T ss_dssp ----------SSHHHHHHHHHHHHHCHHHHHHHHHHHHHH
T ss_pred ----------CCHHHHHHHHHHHhcCHHHHHHHHHHHHHh
Confidence 278899999999999985 45566655543
No 44
>2qzs_A Glycogen synthase; glycosyl-transferase, GT-B fold, rossmann fold, closed-form, ADP and glucose binding, glycogen biosynthesis; HET: GLC ADP 250; 2.20A {Escherichia coli} PDB: 2r4t_A* 2r4u_A* 3guh_A* 3cx4_A* 3cop_A* 3d1j_A
Probab=98.24 E-value=0.00022 Score=71.37 Aligned_cols=139 Identities=12% Similarity=0.070 Sum_probs=79.8
Q ss_pred eEEeccCCCc-CCCHHHHHHHHHHHHhCCCcEEEEEeCCCCccccCCChhHHhhc--cCCCeE-ecCCCCHH---hhhCc
Q 044031 272 VVFLCFGSRG-TFSAPQLKEIAIGLERSNQRFLWVVRNPSNAAEAELPEGFLERT--KERGLV-VKSWAPQS---TILGH 344 (468)
Q Consensus 272 ~v~vs~GS~~-~~~~~~~~~~~~al~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~--~~~~~~-v~~~~pq~---~il~~ 344 (468)
.+++..|.+. ....+.+.+.+..+...+.+++++-.+. ...-+.+.+.. ...++. +.++ ++. .++..
T Consensus 293 ~~i~~vGrl~~~Kg~~~li~a~~~l~~~~~~l~ivG~g~-----~~~~~~l~~~~~~~~~~v~~~~g~-~~~~~~~~~~~ 366 (485)
T 2qzs_A 293 PLFAVVSRLTSQKGLDLVLEALPGLLEQGGQLALLGAGD-----PVLQEGFLAAAAEYPGQVGVQIGY-HEAFSHRIMGG 366 (485)
T ss_dssp CEEEEEEEESGGGCHHHHHHHHHHHHHTTCEEEEEEEEC-----HHHHHHHHHHHHHSTTTEEEEESC-CHHHHHHHHHH
T ss_pred eEEEEeccCccccCHHHHHHHHHHHhhCCcEEEEEeCCc-----hHHHHHHHHHHHhCCCcEEEeCCC-CHHHHHHHHHh
Confidence 5666677774 2223333343444433467766554332 00111222111 125664 6677 543 56778
Q ss_pred cCcceEEec----CCcchHHHHHHhCCcEEecccccchhhHHHHHHhhc---------ceeeeeccCCcccccCCCCccc
Q 044031 345 ESVGGFVTH----CGWSSVVEAVTYGVPMIAWPLYAEQFLNSVALVQEM---------KVAMPMFLNGEEETIGNGEGVV 411 (468)
Q Consensus 345 ~~~~~~ith----gG~~s~~eal~~GvP~v~~P~~~DQ~~na~~~~~~~---------g~g~~~~~~~~~~~~~~~~~~~ 411 (468)
+++ ||.- +-.++++||+++|+|+|+.... -+...+ +.- +.|+.++. -
T Consensus 367 adv--~v~pS~~E~~g~~~lEAma~G~PvI~s~~g----g~~e~v-~~~~~~~~~~~~~~G~l~~~-------------~ 426 (485)
T 2qzs_A 367 ADV--ILVPSRFEPCGLTQLYGLKYGTLPLVRRTG----GLADTV-SDCSLENLADGVASGFVFED-------------S 426 (485)
T ss_dssp CSE--EEECCSCCSSCSHHHHHHHHTCEEEEESSH----HHHHHC-CBCCHHHHHTTCCCBEEECS-------------S
T ss_pred CCE--EEECCccCCCcHHHHHHHHCCCCEEECCCC----Ccccee-ccCccccccccccceEEECC-------------C
Confidence 887 5522 3356889999999999998642 333333 331 46777763 4
Q ss_pred cHHHHHHHHHHHh---cCch-hHHHHHHH
Q 044031 412 SAERVEERVRELM---MGSE-GKALRERS 436 (468)
Q Consensus 412 ~~~~l~~av~~~l---~~~~-~~~~~~~a 436 (468)
+.+++.++|.+++ +|++ .+++.+++
T Consensus 427 d~~~la~~i~~ll~~~~~~~~~~~~~~~~ 455 (485)
T 2qzs_A 427 NAWSLLRAIRRAFVLWSRPSLWRFVQRQA 455 (485)
T ss_dssp SHHHHHHHHHHHHHHHTSHHHHHHHHHHH
T ss_pred CHHHHHHHHHHHHHHcCCHHHHHHHHHHH
Confidence 7899999999999 6774 34444444
No 45
>3q3e_A HMW1C-like glycosyltransferase; N-glycosylation; 2.10A {Actinobacillus pleuropneumoniae serovaorganism_taxid} PDB: 3q3h_A* 3q3i_A
Probab=97.71 E-value=0.00049 Score=69.65 Aligned_cols=153 Identities=12% Similarity=0.081 Sum_probs=92.8
Q ss_pred CceEEeccCCCcCCCHHHHHHHHHHHHhCCCcEEEE--EeCCCCccccCCChhHHhhccCCCeEecCCCCHHhhh---Cc
Q 044031 270 GSVVFLCFGSRGTFSAPQLKEIAIGLERSNQRFLWV--VRNPSNAAEAELPEGFLERTKERGLVVKSWAPQSTIL---GH 344 (468)
Q Consensus 270 ~~~v~vs~GS~~~~~~~~~~~~~~al~~~~~~~l~~--~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~pq~~il---~~ 344 (468)
+.++|.+|++.....++.+....+-+++.+..++|. .+.... ....+-..+.+.-.++.+++.+.+|+.+.+ ..
T Consensus 440 G~v~Fg~fn~~~Ki~p~~l~~WarIL~~vP~s~L~l~~~g~~~g-~~~~~~~~~~~~GI~~Rv~F~g~~p~~e~la~y~~ 518 (631)
T 3q3e_A 440 EVVNIGIASTTMKLNPYFLEALKAIRDRAKVKVHFHFALGQSNG-ITHPYVERFIKSYLGDSATAHPHSPYHQYLRILHN 518 (631)
T ss_dssp SEEEEEEEECSTTCCHHHHHHHHHHHHHCSSEEEEEEEESSCCG-GGHHHHHHHHHHHHGGGEEEECCCCHHHHHHHHHT
T ss_pred CeEEEEECCccccCCHHHHHHHHHHHHhCCCcEEEEEecCCCch-hhHHHHHHHHHcCCCccEEEcCCCCHHHHHHHHhc
Confidence 358999999988888888888888888888777774 332200 000011111111112456677888876544 56
Q ss_pred cCcceEEe---cCCcchHHHHHHhCCcEEecccccchhhHHHHHHhhcceeee-eccCCcccccCCCCccccHHHHHHHH
Q 044031 345 ESVGGFVT---HCGWSSVVEAVTYGVPMIAWPLYAEQFLNSVALVQEMKVAMP-MFLNGEEETIGNGEGVVSAERVEERV 420 (468)
Q Consensus 345 ~~~~~~it---hgG~~s~~eal~~GvP~v~~P~~~DQ~~na~~~~~~~g~g~~-~~~~~~~~~~~~~~~~~~~~~l~~av 420 (468)
+++ |+. .+|.+|+.||+++|||+|+++-..=--..+.-+-...|+.-. +. -+.++..+..
T Consensus 519 aDI--fLDpfpy~GgtTtlEALwmGVPVVTl~G~~~asRvgaSlL~~~GLpE~LIA--------------~d~eeYv~~A 582 (631)
T 3q3e_A 519 CDM--MVNPFPFGNTNGIIDMVTLGLVGVCKTGAEVHEHIDEGLFKRLGLPEWLIA--------------NTVDEYVERA 582 (631)
T ss_dssp CSE--EECCSSSCCSHHHHHHHHTTCCEEEECCSSHHHHHHHHHHHHTTCCGGGEE--------------SSHHHHHHHH
T ss_pred CcE--EEeCCcccCChHHHHHHHcCCCEEeccCCcHHHHhHHHHHHhcCCCcceec--------------CCHHHHHHHH
Confidence 666 543 377899999999999999998532111122111123355432 22 3667777777
Q ss_pred HHHhcCch-hHHHHHHHHHH
Q 044031 421 RELMMGSE-GKALRERSLEM 439 (468)
Q Consensus 421 ~~~l~~~~-~~~~~~~a~~l 439 (468)
.++.+|++ ..++|+++++-
T Consensus 583 v~La~D~~~l~~LR~~Lr~~ 602 (631)
T 3q3e_A 583 VRLAENHQERLELRRYIIEN 602 (631)
T ss_dssp HHHHHCHHHHHHHHHHHHHS
T ss_pred HHHhCCHHHHHHHHHHHHHH
Confidence 78888885 45666665443
No 46
>2bfw_A GLGA glycogen synthase; glycosyltransferase family 5 UDP/ADP-glucose-glycogen syntha rossman folds, transferase; 1.8A {Pyrococcus abyssi} SCOP: c.87.1.8
Probab=97.69 E-value=0.00085 Score=58.17 Aligned_cols=92 Identities=11% Similarity=0.062 Sum_probs=66.9
Q ss_pred CeEe-cCCCCHH---hhhCccCcceEEecC---C-cchHHHHHHhCCcEEecccccchhhHHHHHHhhcceeeeeccCCc
Q 044031 329 GLVV-KSWAPQS---TILGHESVGGFVTHC---G-WSSVVEAVTYGVPMIAWPLYAEQFLNSVALVQEMKVAMPMFLNGE 400 (468)
Q Consensus 329 ~~~v-~~~~pq~---~il~~~~~~~~ithg---G-~~s~~eal~~GvP~v~~P~~~DQ~~na~~~~~~~g~g~~~~~~~~ 400 (468)
++.+ .+++++. .++..+++ +|.-. | ..++.||+++|+|+|+.... .+...+ +. +.|+.++.
T Consensus 96 ~v~~~~g~~~~~~~~~~~~~ad~--~l~ps~~e~~~~~~~Ea~a~G~PvI~~~~~----~~~e~~-~~-~~g~~~~~--- 164 (200)
T 2bfw_A 96 NVKVITEMLSREFVRELYGSVDF--VIIPSYFEPFGLVALEAMCLGAIPIASAVG----GLRDII-TN-ETGILVKA--- 164 (200)
T ss_dssp TEEEECSCCCHHHHHHHHTTCSE--EEECCSCCSSCHHHHHHHHTTCEEEEESCH----HHHHHC-CT-TTCEEECT---
T ss_pred CEEEEeccCCHHHHHHHHHHCCE--EEECCCCCCccHHHHHHHHCCCCEEEeCCC----ChHHHc-CC-CceEEecC---
Confidence 7888 8999854 56777777 55322 3 45889999999999998643 334444 33 67777763
Q ss_pred ccccCCCCccccHHHHHHHHHHHhc-Cch-hHHHHHHHHHHHH
Q 044031 401 EETIGNGEGVVSAERVEERVRELMM-GSE-GKALRERSLEMRM 441 (468)
Q Consensus 401 ~~~~~~~~~~~~~~~l~~av~~~l~-~~~-~~~~~~~a~~l~~ 441 (468)
-+.+++.++|.++++ |++ .+++.+++++..+
T Consensus 165 ----------~~~~~l~~~i~~l~~~~~~~~~~~~~~a~~~~~ 197 (200)
T 2bfw_A 165 ----------GDPGELANAILKALELSRSDLSKFRENCKKRAM 197 (200)
T ss_dssp ----------TCHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHH
T ss_pred ----------CCHHHHHHHHHHHHhcCHHHHHHHHHHHHHHHH
Confidence 478899999999999 886 5667777766544
No 47
>3qhp_A Type 1 capsular polysaccharide biosynthesis prote (CAPJ); rossmann fold, glycosyltransferase, transferase; 1.50A {Helicobacter pylori}
Probab=97.67 E-value=0.00025 Score=59.59 Aligned_cols=139 Identities=9% Similarity=0.074 Sum_probs=81.3
Q ss_pred eEEeccCCCcCCCHHHHHHHHHHHHhC----CCcEEEEEeCCCCccccCCChhHHhhc--cCCCeEecCCCCHHh---hh
Q 044031 272 VVFLCFGSRGTFSAPQLKEIAIGLERS----NQRFLWVVRNPSNAAEAELPEGFLERT--KERGLVVKSWAPQST---IL 342 (468)
Q Consensus 272 ~v~vs~GS~~~~~~~~~~~~~~al~~~----~~~~l~~~~~~~~~~~~~~~~~~~~~~--~~~~~~v~~~~pq~~---il 342 (468)
++++..|++.. .+.+..++++++.. +.+++ .+|... ..+.+.... .+.++.+ +|+|+.+ ++
T Consensus 3 ~~i~~~G~~~~--~Kg~~~li~a~~~l~~~~~~~l~-i~G~g~------~~~~~~~~~~~~~~~v~~-g~~~~~~~~~~~ 72 (166)
T 3qhp_A 3 FKIAMVGRYSN--EKNQSVLIKAVALSKYKQDIVLL-LKGKGP------DEKKIKLLAQKLGVKAEF-GFVNSNELLEIL 72 (166)
T ss_dssp EEEEEESCCST--TTTHHHHHHHHHTCTTGGGEEEE-EECCST------THHHHHHHHHHHTCEEEC-CCCCHHHHHHHH
T ss_pred eEEEEEeccch--hcCHHHHHHHHHHhccCCCeEEE-EEeCCc------cHHHHHHHHHHcCCeEEE-eecCHHHHHHHH
Confidence 66777788752 23355566666654 23333 344321 111222111 1226777 9998654 67
Q ss_pred CccCcceEEe----cCCcchHHHHHHhCC-cEEecccccchhhHHHHHHhhcceeeeeccCCcccccCCCCccccHHHHH
Q 044031 343 GHESVGGFVT----HCGWSSVVEAVTYGV-PMIAWPLYAEQFLNSVALVQEMKVAMPMFLNGEEETIGNGEGVVSAERVE 417 (468)
Q Consensus 343 ~~~~~~~~it----hgG~~s~~eal~~Gv-P~v~~P~~~DQ~~na~~~~~~~g~g~~~~~~~~~~~~~~~~~~~~~~~l~ 417 (468)
..+++ +|. -+...++.||+++|+ |+|+-...+. ....+ +. +.. .+.. -+.+++.
T Consensus 73 ~~adv--~v~ps~~e~~~~~~~Eama~G~vPvi~~~~~~~---~~~~~-~~-~~~-~~~~-------------~~~~~l~ 131 (166)
T 3qhp_A 73 KTCTL--YVHAANVESEAIACLEAISVGIVPVIANSPLSA---TRQFA-LD-ERS-LFEP-------------NNAKDLS 131 (166)
T ss_dssp TTCSE--EEECCCSCCCCHHHHHHHHTTCCEEEECCTTCG---GGGGC-SS-GGG-EECT-------------TCHHHHH
T ss_pred HhCCE--EEECCcccCccHHHHHHHhcCCCcEEeeCCCCc---hhhhc-cC-Cce-EEcC-------------CCHHHHH
Confidence 77777 554 233459999999996 9999432211 11111 12 211 3332 4789999
Q ss_pred HHHHHHhcCch-hHHHHHHHHHHHH
Q 044031 418 ERVRELMMGSE-GKALRERSLEMRM 441 (468)
Q Consensus 418 ~av~~~l~~~~-~~~~~~~a~~l~~ 441 (468)
+++.++++|++ .+++.+++++..+
T Consensus 132 ~~i~~l~~~~~~~~~~~~~~~~~~~ 156 (166)
T 3qhp_A 132 AKIDWWLENKLERERMQNEYAKSAL 156 (166)
T ss_dssp HHHHHHHHCHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHhCHHHHHHHHHHHHHHHH
Confidence 99999999886 5677777777654
No 48
>2xci_A KDO-transferase, 3-deoxy-D-manno-2-octulosonic acid transferase; KDTA, GSEA, glycosyltransferase superfamily B,; HET: PG4; 2.00A {Aquifex aeolicus} PDB: 2xcu_A*
Probab=97.41 E-value=0.00093 Score=64.50 Aligned_cols=99 Identities=13% Similarity=0.154 Sum_probs=69.2
Q ss_pred CeEecCCCC-HHhhhCccCcceEEe---c--CCcchHHHHHHhCCcEEecccccchhhHHHHHHhhcceeeeeccCCccc
Q 044031 329 GLVVKSWAP-QSTILGHESVGGFVT---H--CGWSSVVEAVTYGVPMIAWPLYAEQFLNSVALVQEMKVAMPMFLNGEEE 402 (468)
Q Consensus 329 ~~~v~~~~p-q~~il~~~~~~~~it---h--gG~~s~~eal~~GvP~v~~P~~~DQ~~na~~~~~~~g~g~~~~~~~~~~ 402 (468)
++.+.++.. -..+++.+++ |+. . +|..+++||+++|+|+|+-|..++.......+.+. |.++...
T Consensus 261 ~v~~~~~~~dl~~~y~~aDv--~vl~ss~~e~gg~~~lEAmA~G~PVI~~~~~~~~~e~~~~~~~~-G~l~~~~------ 331 (374)
T 2xci_A 261 DVILVDRFGILKELYPVGKI--AIVGGTFVNIGGHNLLEPTCWGIPVIYGPYTHKVNDLKEFLEKE-GAGFEVK------ 331 (374)
T ss_dssp SEEECCSSSCHHHHGGGEEE--EEECSSSSSSCCCCCHHHHTTTCCEEECSCCTTSHHHHHHHHHT-TCEEECC------
T ss_pred cEEEECCHHHHHHHHHhCCE--EEECCcccCCCCcCHHHHHHhCCCEEECCCccChHHHHHHHHHC-CCEEEeC------
Confidence 455555443 3456766666 543 1 34578999999999999877766666666555334 7666553
Q ss_pred ccCCCCccccHHHHHHHHHHHhcCch-hHHHHHHHHHHHHHHHHh
Q 044031 403 TIGNGEGVVSAERVEERVRELMMGSE-GKALRERSLEMRMMAATA 446 (468)
Q Consensus 403 ~~~~~~~~~~~~~l~~av~~~l~~~~-~~~~~~~a~~l~~~~~~a 446 (468)
+.+++.+++.++++| + .++|.+++++..+.-..+
T Consensus 332 ---------d~~~La~ai~~ll~d-~~r~~mg~~ar~~~~~~~ga 366 (374)
T 2xci_A 332 ---------NETELVTKLTELLSV-KKEIKVEEKSREIKGCYLEK 366 (374)
T ss_dssp ---------SHHHHHHHHHHHHHS-CCCCCHHHHHHHHHHHHHHH
T ss_pred ---------CHHHHHHHHHHHHhH-HHHHHHHHHHHHHHHhcccH
Confidence 568999999999988 6 678999998877654444
No 49
>4gyw_A UDP-N-acetylglucosamine--peptide N- acetylglucosaminyltransferase 110 kDa subunit...; GT-B, glycosyltransferase, glcnacylation, transferase-peptid; HET: UDP NAG; 1.70A {Homo sapiens} PDB: 3pe3_A* 3pe4_A* 4ay5_A* 4ay6_A* 3tax_A* 4gyy_A* 4gz3_A* 4gz5_A* 4gz6_A*
Probab=97.33 E-value=0.0029 Score=66.49 Aligned_cols=152 Identities=15% Similarity=0.177 Sum_probs=93.1
Q ss_pred CCceEEeccCCCcCCCHHHHHHHHHHHHhCCCcEEEEEeCCCCccccCCChhHHhh-ccCCCeEecCCCCHHhhhC-ccC
Q 044031 269 SGSVVFLCFGSRGTFSAPQLKEIAIGLERSNQRFLWVVRNPSNAAEAELPEGFLER-TKERGLVVKSWAPQSTILG-HES 346 (468)
Q Consensus 269 ~~~~v~vs~GS~~~~~~~~~~~~~~al~~~~~~~l~~~~~~~~~~~~~~~~~~~~~-~~~~~~~v~~~~pq~~il~-~~~ 346 (468)
++.+||.+|-+..-.+++.+..-++-|++.+-.++|....+... ...+-..+... +....+++.+..|..+-|. +..
T Consensus 521 ~~~v~f~~fN~~~Ki~p~~~~~W~~IL~~vP~S~L~Ll~~~~~~-~~~l~~~~~~~gi~~~r~~f~~~~~~~~~l~~~~~ 599 (723)
T 4gyw_A 521 EDAIVYCNFNQLYKIDPSTLQMWANILKRVPNSVLWLLRFPAVG-EPNIQQYAQNMGLPQNRIIFSPVAPKEEHVRRGQL 599 (723)
T ss_dssp TTSEEEECCSCGGGCCHHHHHHHHHHHHHCSSEEEEEEETTGGG-HHHHHHHHHHTTCCGGGEEEEECCCHHHHHHHGGG
T ss_pred CCCEEEEeCCccccCCHHHHHHHHHHHHhCCCCeEEEEeCcHHH-HHHHHHHHHhcCCCcCeEEECCCCCHHHHHHHhCC
Confidence 44599999999988999999999999999999999998765110 00011111111 1234567778888655443 333
Q ss_pred cceEEe---cCCcchHHHHHHhCCcEEecccccchhhHHHHHHhhcceeeeeccCCcccccCCCCccccHHH-HHHHHHH
Q 044031 347 VGGFVT---HCGWSSVVEAVTYGVPMIAWPLYAEQFLNSVALVQEMKVAMPMFLNGEEETIGNGEGVVSAER-VEERVRE 422 (468)
Q Consensus 347 ~~~~it---hgG~~s~~eal~~GvP~v~~P~~~DQ~~na~~~~~~~g~g~~~~~~~~~~~~~~~~~~~~~~~-l~~av~~ 422 (468)
+++++. .+|.+|+.|||+.|||+|.+|-..---..+.-+-..+|+.-.+- -+.++ +..|| +
T Consensus 600 ~Di~LDt~p~~g~tT~~eal~~GvPvvt~~g~~~~sR~~~s~l~~~gl~e~ia--------------~~~~~Y~~~a~-~ 664 (723)
T 4gyw_A 600 ADVCLDTPLCNGHTTGMDVLWAGTPMVTMPGETLASRVAASQLTCLGCLELIA--------------KNRQEYEDIAV-K 664 (723)
T ss_dssp CSEEECCSSSCCSHHHHHHHHTTCCEEBCCCSSGGGTHHHHHHHHHTCGGGBC--------------SSHHHHHHHHH-H
T ss_pred CeEEeCCCCcCCHHHHHHHHHcCCCEEEccCCCccHhHHHHHHHHcCCccccc--------------CCHHHHHHHHH-H
Confidence 344765 88999999999999999999942211122333323446554332 24444 44555 4
Q ss_pred HhcCch-hHHHHHHH
Q 044031 423 LMMGSE-GKALRERS 436 (468)
Q Consensus 423 ~l~~~~-~~~~~~~a 436 (468)
+-+|++ ..++|++.
T Consensus 665 la~d~~~l~~lr~~l 679 (723)
T 4gyw_A 665 LGTDLEYLKKVRGKV 679 (723)
T ss_dssp HHHCHHHHHHHHHHH
T ss_pred HhcCHHHHHHHHHHH
Confidence 555664 44455443
No 50
>3oy2_A Glycosyltransferase B736L; rossmann fold, GDP-mannose, sugar, VIRU proteins, viral protein,transferase; 2.31A {Paramecium bursaria chlorella virus NY} PDB: 3oy7_A*
Probab=97.29 E-value=0.0031 Score=61.45 Aligned_cols=144 Identities=11% Similarity=0.147 Sum_probs=80.9
Q ss_pred ceEEeccCCCcCCCHHHHHHHHHHHHh-----CCCcEEEEEeCCCCccccCCChhHHh---hc-cCCC-------eEecC
Q 044031 271 SVVFLCFGSRGTFSAPQLKEIAIGLER-----SNQRFLWVVRNPSNAAEAELPEGFLE---RT-KERG-------LVVKS 334 (468)
Q Consensus 271 ~~v~vs~GS~~~~~~~~~~~~~~al~~-----~~~~~l~~~~~~~~~~~~~~~~~~~~---~~-~~~~-------~~v~~ 334 (468)
..+++..|.... .+.+..++++++. .+.+++++-.+... ....+.+.+.+ .. .... +.+.+
T Consensus 184 ~~~il~vGr~~~--~Kg~~~li~a~~~l~~~~~~~~l~ivG~g~~~-~~~~l~~~~~~~~~~~~l~~~v~~l~~vv~~~g 260 (413)
T 3oy2_A 184 DVLFLNMNRNTA--RKRLDIYVLAAARFISKYPDAKVRFLCNSHHE-SKFDLHSIALRELVASGVDNVFTHLNKIMINRT 260 (413)
T ss_dssp SEEEECCSCSSG--GGTHHHHHHHHHHHHHHCTTCCEEEEEECCTT-CSCCHHHHHHHHHHHHTCSCHHHHHTTEEEECS
T ss_pred ceEEEEcCCCch--hcCcHHHHHHHHHHHHhCCCcEEEEEeCCccc-chhhHHHHHHHHHHHcCcccccccccceeeccC
Confidence 377788888642 2223334444432 35677666554311 00000012221 11 1222 66779
Q ss_pred CCCHHh---hhCccCcceEEe--c--CCcchHHHHHHhCCcEEecccccchhhHHHHHHhhcce----------------
Q 044031 335 WAPQST---ILGHESVGGFVT--H--CGWSSVVEAVTYGVPMIAWPLYAEQFLNSVALVQEMKV---------------- 391 (468)
Q Consensus 335 ~~pq~~---il~~~~~~~~it--h--gG~~s~~eal~~GvP~v~~P~~~DQ~~na~~~~~~~g~---------------- 391 (468)
|+|+.+ ++..+++ +|. + |...++.||+++|+|+|+.... .....+ +. |.
T Consensus 261 ~~~~~~~~~~~~~adv--~v~pS~~E~~~~~~lEAma~G~PvI~s~~~----g~~e~v-~~-~~~~~i~~~~~~~~~~~~ 332 (413)
T 3oy2_A 261 VLTDERVDMMYNACDV--IVNCSSGEGFGLCSAEGAVLGKPLIISAVG----GADDYF-SG-DCVYKIKPSAWISVDDRD 332 (413)
T ss_dssp CCCHHHHHHHHHHCSE--EEECCSCCSSCHHHHHHHTTTCCEEEECCH----HHHHHS-CT-TTSEEECCCEEEECTTTC
T ss_pred cCCHHHHHHHHHhCCE--EEeCCCcCCCCcHHHHHHHcCCCEEEcCCC----ChHHHH-cc-Cccccccccccccccccc
Confidence 999554 5667777 553 2 2345899999999999997643 333333 22 33
Q ss_pred ee--eeccCCcccccCCCCccccHHHHHHHHHHHhcCch-hHHHHHHHHHH
Q 044031 392 AM--PMFLNGEEETIGNGEGVVSAERVEERVRELMMGSE-GKALRERSLEM 439 (468)
Q Consensus 392 g~--~~~~~~~~~~~~~~~~~~~~~~l~~av~~~l~~~~-~~~~~~~a~~l 439 (468)
|+ .+.. -+.+++.++| ++++|++ .+++.+++++.
T Consensus 333 G~~gl~~~-------------~d~~~la~~i-~l~~~~~~~~~~~~~a~~~ 369 (413)
T 3oy2_A 333 GIGGIEGI-------------IDVDDLVEAF-TFFKDEKNRKEYGKRVQDF 369 (413)
T ss_dssp SSCCEEEE-------------CCHHHHHHHH-HHTTSHHHHHHHHHHHHHH
T ss_pred CcceeeCC-------------CCHHHHHHHH-HHhcCHHHHHHHHHHHHHH
Confidence 44 4442 4789999999 9999885 34555554443
No 51
>3rhz_A GTF3, nucleotide sugar synthetase-like protein; glycosyltransferase, transferase; HET: UDP; 1.90A {Streptococcus parasanguinis} PDB: 3qkw_A*
Probab=96.89 E-value=0.0022 Score=60.85 Aligned_cols=111 Identities=11% Similarity=0.055 Sum_probs=76.8
Q ss_pred CeEecCCCCHHhhh---CccCcceEEecCC---------cchHHHHHHhCCcEEecccccchhhHHHHHHhhcceeeeec
Q 044031 329 GLVVKSWAPQSTIL---GHESVGGFVTHCG---------WSSVVEAVTYGVPMIAWPLYAEQFLNSVALVQEMKVAMPMF 396 (468)
Q Consensus 329 ~~~v~~~~pq~~il---~~~~~~~~ithgG---------~~s~~eal~~GvP~v~~P~~~DQ~~na~~~~~~~g~g~~~~ 396 (468)
|+.+.+|+|+.++. +.++.+++..-+. -+-+.|++++|+|+|+.+ ...++..+.+. ++|+.++
T Consensus 215 nV~f~G~~~~~el~~~l~~~~~~lv~~~~~~~~y~~~~~P~Kl~eymA~G~PVI~~~----~~~~~~~v~~~-~~G~~~~ 289 (339)
T 3rhz_A 215 NVHKINYRPDEQLLMEMSQGGFGLVWMDDKDKEYQSLYCSYKLGSFLAAGIPVIVQE----GIANQELIENN-GLGWIVK 289 (339)
T ss_dssp TEEEEECCCHHHHHHHHHTEEEEECCCCGGGHHHHTTCCCHHHHHHHHHTCCEEEET----TCTTTHHHHHH-TCEEEES
T ss_pred CEEEeCCCCHHHHHHHHHhCCEEEEECCCchhHHHHhcChHHHHHHHHcCCCEEEcc----ChhHHHHHHhC-CeEEEeC
Confidence 88898999988764 3445544442221 235889999999999866 45677777665 9999886
Q ss_pred cCCcccccCCCCccccHHHHHHHHHHHhcCchhHHHHHHHHHHHHHHHHhhcCCCCCChHHHHHHHHHHh
Q 044031 397 LNGEEETIGNGEGVVSAERVEERVRELMMGSEGKALRERSLEMRMMAATAWNNNDGGSSFTAFSNLFDLW 466 (468)
Q Consensus 397 ~~~~~~~~~~~~~~~~~~~l~~av~~~l~~~~~~~~~~~a~~l~~~~~~a~~~~~~g~~~~~~~~~~~~~ 466 (468)
+.+++.+++..+. .++.++|++|+++.++.++. |--..+.+.+.+.++
T Consensus 290 ---------------~~~e~~~~i~~l~-~~~~~~m~~na~~~a~~~~~------~~f~k~~l~~~~~~~ 337 (339)
T 3rhz_A 290 ---------------DVEEAIMKVKNVN-EDEYIELVKNVRSFNPILRK------GFFTRRLLTESVFQA 337 (339)
T ss_dssp ---------------SHHHHHHHHHHCC-HHHHHHHHHHHHHHTHHHHT------THHHHHHHHHHHHHH
T ss_pred ---------------CHHHHHHHHHHhC-HHHHHHHHHHHHHHHHHhhc------cHHHHHHHHHHHHHh
Confidence 3467888888753 33478899999998887664 344555555555443
No 52
>1psw_A ADP-heptose LPS heptosyltransferase II; structural genomics, NYSGXRC, LPS biosynthetic pathway, PSI, protein structure initiative; 2.00A {Escherichia coli} SCOP: c.87.1.7
Probab=96.24 E-value=0.13 Score=48.53 Aligned_cols=97 Identities=13% Similarity=0.146 Sum_probs=58.9
Q ss_pred CCceEEeccCC-Cc---CCCHHHHHHHHHHHHhCCCcEEEEEeCCCCccccCCChhHHhhcc---CCCe-EecCCCC---
Q 044031 269 SGSVVFLCFGS-RG---TFSAPQLKEIAIGLERSNQRFLWVVRNPSNAAEAELPEGFLERTK---ERGL-VVKSWAP--- 337 (468)
Q Consensus 269 ~~~~v~vs~GS-~~---~~~~~~~~~~~~al~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~---~~~~-~v~~~~p--- 337 (468)
+++.|.+.-|| .. ..+.+.+.++++.|.+.+.++++. +.+.+ ...-+.+.+... ..++ .+.+..+
T Consensus 179 ~~~~i~l~pga~~~~~k~wp~~~~~~l~~~L~~~~~~vvl~-g~~~e---~~~~~~i~~~~~~~~~~~~~~l~g~~sl~e 254 (348)
T 1psw_A 179 ERPMIGFCPGAEFGPAKRWPHYHYAELAKQLIDEGYQVVLF-GSAKD---HEAGNEILAALNTEQQAWCRNLAGETQLDQ 254 (348)
T ss_dssp SSCEEEEECCCTTCGGGSCCHHHHHHHHHHHHHTTCEEEEC-CCGGG---HHHHHHHHTTSCHHHHTTEEECTTTSCHHH
T ss_pred CCcEEEEECCCCccccCCCCHHHHHHHHHHHHHCCCeEEEE-eChhh---HHHHHHHHHhhhhccccceEeccCcCCHHH
Confidence 44588888888 32 567888999999998778887764 44311 101111111111 0122 2333332
Q ss_pred HHhhhCccCcceEEecCCcchHHHHHHhCCcEEec
Q 044031 338 QSTILGHESVGGFVTHCGWSSVVEAVTYGVPMIAW 372 (468)
Q Consensus 338 q~~il~~~~~~~~ithgG~~s~~eal~~GvP~v~~ 372 (468)
-..++.++++ +|+.- .|++.-|.+.|+|+|++
T Consensus 255 ~~ali~~a~l--~I~~D-sg~~HlAaa~g~P~v~l 286 (348)
T 1psw_A 255 AVILIAACKA--IVTND-SGLMHVAAALNRPLVAL 286 (348)
T ss_dssp HHHHHHTSSE--EEEES-SHHHHHHHHTTCCEEEE
T ss_pred HHHHHHhCCE--EEecC-CHHHHHHHHcCCCEEEE
Confidence 3468888888 99973 34555588899999987
No 53
>3tov_A Glycosyl transferase family 9; structural genomics, PSI-BIOL protein structure initiative, midwest center for structural genomics, MCSG; 2.98A {Veillonella parvula}
Probab=96.15 E-value=0.19 Score=47.55 Aligned_cols=96 Identities=17% Similarity=0.297 Sum_probs=59.7
Q ss_pred CCceEEeccCCCc---CCCHHHHHHHHHHHHhCCCcEEEEEeCCCCccccCCChhHHhhccCCCeEecCCCC---HHhhh
Q 044031 269 SGSVVFLCFGSRG---TFSAPQLKEIAIGLERSNQRFLWVVRNPSNAAEAELPEGFLERTKERGLVVKSWAP---QSTIL 342 (468)
Q Consensus 269 ~~~~v~vs~GS~~---~~~~~~~~~~~~al~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~p---q~~il 342 (468)
+++.|.+..||.. .++.+.+.++++.|.+.+.++++ ++.+.+ ..+-+.+.+....+.+.+.+-.+ -..++
T Consensus 184 ~~~~i~i~pga~~~~k~wp~~~~~~l~~~l~~~g~~vvl-~g~~~e---~~~~~~i~~~~~~~~~~l~g~~sl~e~~ali 259 (349)
T 3tov_A 184 TDILIGFNIGSAVPEKRWPAERFAHVADYFGRLGYKTVF-FGGPMD---LEMVQPVVEQMETKPIVATGKFQLGPLAAAM 259 (349)
T ss_dssp TCCEEEEECCCSSGGGCCCHHHHHHHHHHHHHHTCEEEE-CCCTTT---HHHHHHHHHTCSSCCEECTTCCCHHHHHHHH
T ss_pred CCCEEEEeCCCCCccCCCCHHHHHHHHHHHHhCCCeEEE-EeCcch---HHHHHHHHHhcccccEEeeCCCCHHHHHHHH
Confidence 3558888888853 66788899999999777888876 444311 11111222222222333333332 34678
Q ss_pred CccCcceEEec-CCcchHHHHHHhCCcEEec
Q 044031 343 GHESVGGFVTH-CGWSSVVEAVTYGVPMIAW 372 (468)
Q Consensus 343 ~~~~~~~~ith-gG~~s~~eal~~GvP~v~~ 372 (468)
.++++ +|+. .|..-+ |.+.|+|+|++
T Consensus 260 ~~a~~--~i~~DsG~~Hl--Aaa~g~P~v~l 286 (349)
T 3tov_A 260 NRCNL--LITNDSGPMHV--GISQGVPIVAL 286 (349)
T ss_dssp HTCSE--EEEESSHHHHH--HHTTTCCEEEE
T ss_pred HhCCE--EEECCCCHHHH--HHhcCCCEEEE
Confidence 88888 9998 443333 77899999997
No 54
>2x0d_A WSAF; GT4 family, transferase; HET: MSE; 2.28A {Geobacillus stearothermophilus} PDB: 2x0f_A* 2x0e_A*
Probab=95.20 E-value=0.0061 Score=59.55 Aligned_cols=80 Identities=16% Similarity=0.115 Sum_probs=55.5
Q ss_pred CCeEecCCCCHHh---hhCccCcceEEe--c-CC-cchHHHHHHhCCcEEecccccchhhHHHHHHhhcceeeeeccCCc
Q 044031 328 RGLVVKSWAPQST---ILGHESVGGFVT--H-CG-WSSVVEAVTYGVPMIAWPLYAEQFLNSVALVQEMKVAMPMFLNGE 400 (468)
Q Consensus 328 ~~~~v~~~~pq~~---il~~~~~~~~it--h-gG-~~s~~eal~~GvP~v~~P~~~DQ~~na~~~~~~~g~g~~~~~~~~ 400 (468)
.++.+.+++|+.+ ++..+++ ||. . =| ..+++||+++|+|+|+ -..+ ....+ +.-..|+.++.
T Consensus 295 ~~v~f~G~~~~~~l~~~~~~adv--~v~pS~~E~~g~~~lEAmA~G~PVV~-~~~g----~~e~v-~~~~~G~lv~~--- 363 (413)
T 2x0d_A 295 IHLNSLGKLTLEDYADLLKRSSI--GISLMISPHPSYPPLEMAHFGLRVIT-NKYE----NKDLS-NWHSNIVSLEQ--- 363 (413)
T ss_dssp EEEEEEESCCHHHHHHHHHHCCE--EECCCSSSSCCSHHHHHHHTTCEEEE-ECBT----TBCGG-GTBTTEEEESS---
T ss_pred CcEEEcCCCCHHHHHHHHHhCCE--EEEecCCCCCCcHHHHHHhCCCcEEE-eCCC----cchhh-hcCCCEEEeCC---
Confidence 4677789998764 5667777 663 2 13 3568999999999998 3322 11233 33246777764
Q ss_pred ccccCCCCccccHHHHHHHHHHHhcCch
Q 044031 401 EETIGNGEGVVSAERVEERVRELMMGSE 428 (468)
Q Consensus 401 ~~~~~~~~~~~~~~~l~~av~~~l~~~~ 428 (468)
-+.++++++|.++++|++
T Consensus 364 ----------~d~~~la~ai~~ll~~~~ 381 (413)
T 2x0d_A 364 ----------LNPENIAETLVELCMSFN 381 (413)
T ss_dssp ----------CSHHHHHHHHHHHHHHTC
T ss_pred ----------CCHHHHHHHHHHHHcCHH
Confidence 478899999999999873
No 55
>2hy7_A Glucuronosyltransferase GUMK; glycosyltransferases, xanthan, membrane-associated proteins; 1.90A {Xanthomonas campestris} PDB: 2q6v_A* 3cv3_A* 3cuy_A*
Probab=94.50 E-value=0.14 Score=49.62 Aligned_cols=77 Identities=10% Similarity=0.052 Sum_probs=56.0
Q ss_pred CCCeEecCCCCHHh---hhCccCcceEEe-cCC-cchHHHHH-------HhCCcEEecccccchhhHHHHHHhhcceeee
Q 044031 327 ERGLVVKSWAPQST---ILGHESVGGFVT-HCG-WSSVVEAV-------TYGVPMIAWPLYAEQFLNSVALVQEMKVAMP 394 (468)
Q Consensus 327 ~~~~~v~~~~pq~~---il~~~~~~~~it-hgG-~~s~~eal-------~~GvP~v~~P~~~DQ~~na~~~~~~~g~g~~ 394 (468)
.+++.+.+++|+.+ ++..+++-++-+ +-| .+++.||+ ++|+|+|+-.. +.+. ..|..
T Consensus 264 ~~~V~f~G~~~~~~l~~~~~~adv~v~ps~~E~~~~~~lEAm~Kl~eYla~G~PVIas~~----------v~~~-~~G~l 332 (406)
T 2hy7_A 264 GDNVIVYGEMKHAQTIGYIKHARFGIAPYASEQVPVYLADSSMKLLQYDFFGLPAVCPNA----------VVGP-YKSRF 332 (406)
T ss_dssp CTTEEEECCCCHHHHHHHHHTCSEEECCBSCSCCCTTHHHHCHHHHHHHHHTCCEEEEGG----------GTCS-CSSEE
T ss_pred CCCEEEcCCCCHHHHHHHHHhcCEEEECCCcccCchHHHHHHHHHHHHhhCCCcEEEehh----------cccC-cceEE
Confidence 45788889999754 577777722222 233 45789999 99999999865 4332 55776
Q ss_pred -eccCCcccccCCCCccccHHHHHHHHHHHhcCc
Q 044031 395 -MFLNGEEETIGNGEGVVSAERVEERVRELMMGS 427 (468)
Q Consensus 395 -~~~~~~~~~~~~~~~~~~~~~l~~av~~~l~~~ 427 (468)
+.. -+.+++.++|.++++|+
T Consensus 333 ~v~~-------------~d~~~la~ai~~ll~~~ 353 (406)
T 2hy7_A 333 GYTP-------------GNADSVIAAITQALEAP 353 (406)
T ss_dssp EECT-------------TCHHHHHHHHHHHHHCC
T ss_pred EeCC-------------CCHHHHHHHHHHHHhCc
Confidence 663 47889999999999887
No 56
>3vue_A GBSS-I, granule-bound starch synthase 1, chloroplastic/amyloplastic; rossmann fold, glycosyltransferase, transferase; 2.70A {Oryza sativa japonica group} PDB: 3vuf_A*
Probab=91.89 E-value=0.85 Score=45.88 Aligned_cols=135 Identities=9% Similarity=0.037 Sum_probs=70.0
Q ss_pred eEEeccCCCcC-CCHHHHHHHHHHHHhCCCcEEEEEeCCCCccccCCChhHH--hhccCCCeEecCCCCHH---hhhCcc
Q 044031 272 VVFLCFGSRGT-FSAPQLKEIAIGLERSNQRFLWVVRNPSNAAEAELPEGFL--ERTKERGLVVKSWAPQS---TILGHE 345 (468)
Q Consensus 272 ~v~vs~GS~~~-~~~~~~~~~~~al~~~~~~~l~~~~~~~~~~~~~~~~~~~--~~~~~~~~~v~~~~pq~---~il~~~ 345 (468)
++++..|.+.. ...+.+.+.+..|.+.+.+++++..+. . . ....+. ......++.+....++. .+++.+
T Consensus 328 p~i~~vgRl~~~Kg~~~li~a~~~l~~~~~~l~l~G~G~-~-~---~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~a 402 (536)
T 3vue_A 328 PLIAFIGRLEEQKGPDVMAAAIPELMQEDVQIVLLGTGK-K-K---FEKLLKSMEEKYPGKVRAVVKFNAPLAHLIMAGA 402 (536)
T ss_dssp CEEEEECCBSGGGCHHHHHHHHHHHTTSSCEEEEECCBC-H-H---HHHHHHHHHHHSTTTEEEECSCCHHHHHHHHHHC
T ss_pred cEEEEEeeccccCChHHHHHHHHHhHhhCCeEEEEeccC-c-h---HHHHHHHHHhhcCCceEEEEeccHHHHHHHHHhh
Confidence 55666787752 223333333444444566766543332 0 0 001111 11123466666666654 356667
Q ss_pred CcceEEec---CC-cchHHHHHHhCCcEEecccccchhhHHHHHHhhcceeeeeccCCcccccCCCCc-c---ccHHHHH
Q 044031 346 SVGGFVTH---CG-WSSVVEAVTYGVPMIAWPLYAEQFLNSVALVQEMKVAMPMFLNGEEETIGNGEG-V---VSAERVE 417 (468)
Q Consensus 346 ~~~~~ith---gG-~~s~~eal~~GvP~v~~P~~~DQ~~na~~~~~~~g~g~~~~~~~~~~~~~~~~~-~---~~~~~l~ 417 (468)
++ ||.= =| -.+++||+++|+|+|+-...+ ....+.+. .-|..... ...++ . .+.+.+.
T Consensus 403 D~--~v~PS~~E~fgl~~lEAma~G~PvI~s~~gG----~~e~V~dg-~~G~~~~~-------~~~~g~l~~~~d~~~la 468 (536)
T 3vue_A 403 DV--LAVPSRFEPCGLIQLQGMRYGTPCACASTGG----LVDTVIEG-KTGFHMGR-------LSVDCKVVEPSDVKKVA 468 (536)
T ss_dssp SE--EEECCSCCSSCSHHHHHHHTTCCEEECSCTH----HHHHCCBT-TTEEECCC-------CCSCTTCCCHHHHHHHH
T ss_pred he--eecccccCCCCHHHHHHHHcCCCEEEcCCCC----chheeeCC-CCcccccc-------CCCceeEECCCCHHHHH
Confidence 77 6532 12 258999999999999976532 33333222 34443331 01111 1 3567889
Q ss_pred HHHHHHhc
Q 044031 418 ERVRELMM 425 (468)
Q Consensus 418 ~av~~~l~ 425 (468)
++|++++.
T Consensus 469 ~ai~ral~ 476 (536)
T 3vue_A 469 ATLKRAIK 476 (536)
T ss_dssp HHHHHHHH
T ss_pred HHHHHHHH
Confidence 99988774
No 57
>1xmp_A PURE, phosphoribosylaminoimidazole carboxylase; purine biosynthesis, spine, lyase; 1.80A {Bacillus anthracis} SCOP: c.23.8.1
Probab=82.41 E-value=15 Score=30.13 Aligned_cols=147 Identities=15% Similarity=0.124 Sum_probs=80.8
Q ss_pred CceEEeccCCCcCCCHHHHHHHHHHHHhCCCcEEEEEeCCCCccccCCChhHHhhccCCCeEecCCCCHHhhhCccCcce
Q 044031 270 GSVVFLCFGSRGTFSAPQLKEIAIGLERSNQRFLWVVRNPSNAAEAELPEGFLERTKERGLVVKSWAPQSTILGHESVGG 349 (468)
Q Consensus 270 ~~~v~vs~GS~~~~~~~~~~~~~~al~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~pq~~il~~~~~~~ 349 (468)
+|.|-|-+||.+ +.+..++....|+..|.++=.-+-+. ...|+.+.+ |+.+.. -...++
T Consensus 11 ~~~V~IimGS~S--D~~v~~~a~~~L~~~Gi~~dv~V~Sa-----HR~p~~l~~-----------~~~~a~-~~g~~V-- 69 (170)
T 1xmp_A 11 KSLVGVIMGSTS--DWETMKYACDILDELNIPYEKKVVSA-----HRTPDYMFE-----------YAETAR-ERGLKV-- 69 (170)
T ss_dssp CCSEEEEESSGG--GHHHHHHHHHHHHHTTCCEEEEECCT-----TTSHHHHHH-----------HHHHTT-TTTCCE--
T ss_pred CCcEEEEECcHH--HHHHHHHHHHHHHHcCCCEEEEEEec-----cCCHHHHHH-----------HHHHHH-hCCCcE--
Confidence 346777788885 66777888999999998865444433 345554332 111100 011233
Q ss_pred EEecCCcchHHHHHHh---CCcEEecccccc--hhhHHHHHHhh--cceeeeeccCCcccccCCCCccccHHHHHHHHHH
Q 044031 350 FVTHCGWSSVVEAVTY---GVPMIAWPLYAE--QFLNSVALVQE--MKVAMPMFLNGEEETIGNGEGVVSAERVEERVRE 422 (468)
Q Consensus 350 ~ithgG~~s~~eal~~---GvP~v~~P~~~D--Q~~na~~~~~~--~g~g~~~~~~~~~~~~~~~~~~~~~~~l~~av~~ 422 (468)
||.=+|...-+-++.+ -+|+|++|.... .-..+-.-.-+ -|+.+..-. ..+.+..++.-+...|.
T Consensus 70 iIa~AG~aa~LpgvvA~~t~~PVIgVP~~~~~l~G~daLlSivqmP~GvpVatV~-------I~~a~~~nAallAaqIl- 141 (170)
T 1xmp_A 70 IIAGAGGAAHLPGMVAAKTNLPVIGVPVQSKALNGLDSLLSIVQMPGGVPVATVA-------IGKAGSTNAGLLAAQIL- 141 (170)
T ss_dssp EEEEEESSCCHHHHHHTTCCSCEEEEEECCTTTTTHHHHHHHHCCCTTCCCEECC-------SSHHHHHHHHHHHHHHH-
T ss_pred EEEECCchhhhHHHHHhccCCCEEEeeCCCCCCCcHHHHHHHhcCCCCCeeEEEe-------cCCcchHHHHHHHHHHH-
Confidence 7777765544444333 489999998542 22222221112 144432211 01112255666665554
Q ss_pred HhcCchhHHHHHHHHHHHHHHHHhhc
Q 044031 423 LMMGSEGKALRERSLEMRMMAATAWN 448 (468)
Q Consensus 423 ~l~~~~~~~~~~~a~~l~~~~~~a~~ 448 (468)
-+.|+ +++++.+.+++..++.+.
T Consensus 142 a~~d~---~l~~kl~~~r~~~~~~v~ 164 (170)
T 1xmp_A 142 GSFHD---DIHDALELRREAIEKDVR 164 (170)
T ss_dssp HTTCH---HHHHHHHHHHHHHHHHHH
T ss_pred ccCCH---HHHHHHHHHHHHHHHHHH
Confidence 34677 788888888888777666
No 58
>1o4v_A Phosphoribosylaminoimidazole mutase PURE; structural genomics, joint center for structural genomics, J protein structure initiative, PSI; 1.77A {Thermotoga maritima} SCOP: c.23.8.1
Probab=80.64 E-value=23 Score=29.37 Aligned_cols=143 Identities=16% Similarity=0.171 Sum_probs=79.3
Q ss_pred ceEEeccCCCcCCCHHHHHHHHHHHHhCCCcEEEEEeCCCCccccCCChhHHhhccCCCeEecCCCCHHhhhCccCcceE
Q 044031 271 SVVFLCFGSRGTFSAPQLKEIAIGLERSNQRFLWVVRNPSNAAEAELPEGFLERTKERGLVVKSWAPQSTILGHESVGGF 350 (468)
Q Consensus 271 ~~v~vs~GS~~~~~~~~~~~~~~al~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~pq~~il~~~~~~~~ 350 (468)
|.|-|-+||.+ +.+..++....|+..|.++=.-+-+. ...|+.+.+ |+.+.. -...++ |
T Consensus 14 ~~V~IimGS~S--D~~v~~~a~~~L~~~Gi~~dv~V~Sa-----HR~p~~l~~-----------~~~~a~-~~g~~V--i 72 (183)
T 1o4v_A 14 PRVGIIMGSDS--DLPVMKQAAEILEEFGIDYEITIVSA-----HRTPDRMFE-----------YAKNAE-ERGIEV--I 72 (183)
T ss_dssp CEEEEEESCGG--GHHHHHHHHHHHHHTTCEEEEEECCT-----TTCHHHHHH-----------HHHHTT-TTTCCE--E
T ss_pred CeEEEEeccHH--HHHHHHHHHHHHHHcCCCeEEEEEcc-----cCCHHHHHH-----------HHHHHH-hCCCcE--E
Confidence 47888888886 66777888999999998865444433 445554332 111100 011233 7
Q ss_pred EecCCcc----hHHHHHHhCCcEEeccccc--chhhHHHHHHhhc--ceeeeeccCCcccccCCCCccccHHHHHHHHHH
Q 044031 351 VTHCGWS----SVVEAVTYGVPMIAWPLYA--EQFLNSVALVQEM--KVAMPMFLNGEEETIGNGEGVVSAERVEERVRE 422 (468)
Q Consensus 351 ithgG~~----s~~eal~~GvP~v~~P~~~--DQ~~na~~~~~~~--g~g~~~~~~~~~~~~~~~~~~~~~~~l~~av~~ 422 (468)
|.=+|.. ++..++ .-+|+|++|... -.-..+-.-.-+. |+.+..-. =++..++.-++..|.
T Consensus 73 Ia~AG~aa~LpgvvA~~-t~~PVIgVP~~~~~l~G~dsLlSivqmP~GvpVatV~---------Id~~~nAa~lAaqIl- 141 (183)
T 1o4v_A 73 IAGAGGAAHLPGMVASI-THLPVIGVPVKTSTLNGLDSLFSIVQMPGGVPVATVA---------INNAKNAGILAASIL- 141 (183)
T ss_dssp EEEEESSCCHHHHHHHH-CSSCEEEEEECCTTTTTHHHHHHHHTCCTTCCCEECC---------TTCHHHHHHHHHHHH-
T ss_pred EEecCcccccHHHHHhc-cCCCEEEeeCCCCCCCcHHHHHHHhcCCCCCeeEEEe---------cCCchHHHHHHHHHH-
Confidence 7766644 333333 568999999854 2223332221234 54332221 022356666666565
Q ss_pred HhcCchhHHHHHHHHHHHHHHHHhhc
Q 044031 423 LMMGSEGKALRERSLEMRMMAATAWN 448 (468)
Q Consensus 423 ~l~~~~~~~~~~~a~~l~~~~~~a~~ 448 (468)
-+.|+ +++++.+.++...++.+.
T Consensus 142 a~~d~---~l~~kL~~~r~~~~~~v~ 164 (183)
T 1o4v_A 142 GIKYP---EIARKVKEYKERMKREVL 164 (183)
T ss_dssp HTTCH---HHHHHHHHHHHHHHHHHH
T ss_pred hcCCH---HHHHHHHHHHHHHHHHHH
Confidence 34677 677777777766666554
No 59
>2gt1_A Lipopolysaccharide heptosyltransferase-1; GT-B fold; 1.90A {Escherichia coli UTI89} PDB: 2h1f_A* 2h1h_A*
Probab=80.63 E-value=2.2 Score=39.59 Aligned_cols=137 Identities=15% Similarity=0.104 Sum_probs=76.7
Q ss_pred CCceEEeccCCCc---CCCHHHHHHHHHHHHhCCCcEEEEEeCCCCccccCCChhHHhhccCCCeEecCCCC---HHhhh
Q 044031 269 SGSVVFLCFGSRG---TFSAPQLKEIAIGLERSNQRFLWVVRNPSNAAEAELPEGFLERTKERGLVVKSWAP---QSTIL 342 (468)
Q Consensus 269 ~~~~v~vs~GS~~---~~~~~~~~~~~~al~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~p---q~~il 342 (468)
+++.|.+..||.. ..+.+.+.++++.|.+.+.++++..+... +...-+.+.+.. +++.+.+-.+ -..++
T Consensus 177 ~~~~i~l~pga~~~~k~wp~~~~~~l~~~L~~~~~~vvl~~g~~~---e~~~~~~i~~~~--~~~~l~g~~sl~el~ali 251 (326)
T 2gt1_A 177 AGEYAVFLHATTRDDKHWPEEHWRELIGLLADSGIRIKLPWGAPH---EEERAKRLAEGF--AYVEVLPKMSLEGVARVL 251 (326)
T ss_dssp TTSEEEEECCCSSGGGSCCHHHHHHHHHHTTTTCCEEEECCSSHH---HHHHHHHHHTTC--TTEEECCCCCHHHHHHHH
T ss_pred CCCEEEEEeCCCCccccCCHHHHHHHHHHHHHCCCcEEEecCCHH---HHHHHHHHHhhC--CcccccCCCCHHHHHHHH
Confidence 3457888778754 66788899999988777888766544321 111111111111 2333333222 34678
Q ss_pred CccCcceEEec-CCcchHHHHHHhCCcEEec--ccccchhhHHHHHHhhcceee-eeccCCcccccCCCCccccHHHHHH
Q 044031 343 GHESVGGFVTH-CGWSSVVEAVTYGVPMIAW--PLYAEQFLNSVALVQEMKVAM-PMFLNGEEETIGNGEGVVSAERVEE 418 (468)
Q Consensus 343 ~~~~~~~~ith-gG~~s~~eal~~GvP~v~~--P~~~DQ~~na~~~~~~~g~g~-~~~~~~~~~~~~~~~~~~~~~~l~~ 418 (468)
.++++ +|+. .|.-.+ |.+.|+|+|++ |. | ..+- .-+|-.. .+.. ...|-++ ++.+++.+
T Consensus 252 ~~a~l--~I~~DSG~~Hl--Aaa~g~P~v~lfg~t--~----p~~~-~P~~~~~~~~~~---~~~cm~~---I~~~~V~~ 314 (326)
T 2gt1_A 252 AGAKF--VVSVDTGLSHL--TAALDRPNITVYGPT--D----PGLI-GGYGKNQMVCRA---PGNELSQ---LTANAVKQ 314 (326)
T ss_dssp HTCSE--EEEESSHHHHH--HHHTTCCEEEEESSS--C----HHHH-CCCSSSEEEEEC---GGGCGGG---CCHHHHHH
T ss_pred HhCCE--EEecCCcHHHH--HHHcCCCEEEEECCC--C----hhhc-CCCCCCceEecC---CcccccC---CCHHHHHH
Confidence 88888 9998 554444 55599999998 32 1 1111 0112111 1110 0011123 89999999
Q ss_pred HHHHHhcCc
Q 044031 419 RVRELMMGS 427 (468)
Q Consensus 419 av~~~l~~~ 427 (468)
+++++|++-
T Consensus 315 ~i~~~l~~~ 323 (326)
T 2gt1_A 315 FIEENAEKA 323 (326)
T ss_dssp HHHHTTTTC
T ss_pred HHHHHHHHh
Confidence 999999754
No 60
>3nb0_A Glycogen [starch] synthase isoform 2; glycogen synthase, glucose-6-phosphate, yeast, allosteric AC transferase; HET: G6P; 2.41A {Saccharomyces cerevisiae} PDB: 3rt1_A* 3nch_A 3naz_A 3o3c_A* 3rsz_A*
Probab=79.95 E-value=1.9 Score=44.24 Aligned_cols=47 Identities=17% Similarity=0.265 Sum_probs=31.6
Q ss_pred eEecCCCCH---------HhhhCccCcceEEe-cCCc-chHHHHHHhCCcEEeccccc
Q 044031 330 LVVKSWAPQ---------STILGHESVGGFVT-HCGW-SSVVEAVTYGVPMIAWPLYA 376 (468)
Q Consensus 330 ~~v~~~~pq---------~~il~~~~~~~~it-hgG~-~s~~eal~~GvP~v~~P~~~ 376 (468)
+.+-.|++. ..++..+++-++-+ +=|+ .+.+||+++|+|+|+--..+
T Consensus 495 If~P~~L~~~d~lf~~d~~~~~~~advfV~PS~~EgfGl~~LEAmA~G~PvI~s~~gG 552 (725)
T 3nb0_A 495 IFHPEFLNANNPILGLDYDEFVRGCHLGVFPSYYEPWGYTPAECTVMGVPSITTNVSG 552 (725)
T ss_dssp EECCSCCCTTCSSSCCCHHHHHHHCSEEECCCSSBSSCHHHHHHHHTTCCEEEETTBH
T ss_pred EEeccccCCCCccchhHHHHHHhhceEEEeccccCCCCHHHHHHHHcCCCEEEeCCCC
Confidence 334467765 45788888833333 2343 48999999999999976543
No 61
>3rg8_A Phosphoribosylaminoimidazole carboxylase, PURE PR; purine biosynthesis, lyase; 1.74A {Treponema denticola} SCOP: c.23.8.0 PDB: 3rgg_A*
Probab=79.09 E-value=16 Score=29.71 Aligned_cols=141 Identities=13% Similarity=0.097 Sum_probs=73.9
Q ss_pred eEEeccCCCcCCCHHHHHHHHHHHHhCCCcEEEEEeCCCCccccCCChhHHhhccCCCeEecCCCCHHhhhCccCcceEE
Q 044031 272 VVFLCFGSRGTFSAPQLKEIAIGLERSNQRFLWVVRNPSNAAEAELPEGFLERTKERGLVVKSWAPQSTILGHESVGGFV 351 (468)
Q Consensus 272 ~v~vs~GS~~~~~~~~~~~~~~al~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~pq~~il~~~~~~~~i 351 (468)
.|-|-+||.+ +.+..++....|+..|.++=.-+-+. +..|+.+. .|+.+.. .....++||
T Consensus 4 ~V~Iimgs~S--D~~v~~~a~~~l~~~gi~~ev~V~sa-----HR~p~~~~-----------~~~~~a~--~~~~~~ViI 63 (159)
T 3rg8_A 4 LVIILMGSSS--DMGHAEKIASELKTFGIEYAIRIGSA-----HKTAEHVV-----------SMLKEYE--ALDRPKLYI 63 (159)
T ss_dssp EEEEEESSGG--GHHHHHHHHHHHHHTTCEEEEEECCT-----TTCHHHHH-----------HHHHHHH--TSCSCEEEE
T ss_pred eEEEEECcHH--HHHHHHHHHHHHHHcCCCEEEEEEcc-----cCCHHHHH-----------HHHHHhh--hcCCCcEEE
Confidence 5667778875 56777888899999998865444443 44555433 2211111 001233488
Q ss_pred ecCCcchHHHHHH---hCCcEEeccccc---chhhHHHHHHhhcceeeeeccCCcccccCCCCccccHHHHHHHHHHHhc
Q 044031 352 THCGWSSVVEAVT---YGVPMIAWPLYA---EQFLNSVALVQEMKVAMPMFLNGEEETIGNGEGVVSAERVEERVRELMM 425 (468)
Q Consensus 352 thgG~~s~~eal~---~GvP~v~~P~~~---DQ~~na~~~~~~~g~g~~~~~~~~~~~~~~~~~~~~~~~l~~av~~~l~ 425 (468)
.=+|...-+-++. --+|+|++|... +-.+ ---+.+ .--|+.+-. - ++-.++.-+...|-. +.
T Consensus 64 a~AG~aa~LpgvvA~~t~~PVIgVP~~~~~l~G~d-LlS~vq-mp~GvpVat-------v--~~~~nAa~lA~~Il~-~~ 131 (159)
T 3rg8_A 64 TIAGRSNALSGFVDGFVKGATIACPPPSDSFAGAD-IYSSLR-MPSGISPAL-------V--LEPKNAALLAARIFS-LY 131 (159)
T ss_dssp EECCSSCCHHHHHHHHSSSCEEECCCCCCGGGGTH-HHHHHC-CCTTCCCEE-------C--CSHHHHHHHHHHHHT-TT
T ss_pred EECCchhhhHHHHHhccCCCEEEeeCCCCCCCCcc-HHHHHh-CCCCCceEE-------e--cCchHHHHHHHHHHh-CC
Confidence 8777553333333 448999999642 1111 111222 222333321 0 122566555554433 35
Q ss_pred CchhHHHHHHHHHHHHHHHHhh
Q 044031 426 GSEGKALRERSLEMRMMAATAW 447 (468)
Q Consensus 426 ~~~~~~~~~~a~~l~~~~~~a~ 447 (468)
|+ +++++.+.+++..++.+
T Consensus 132 d~---~l~~kl~~~r~~~~~~v 150 (159)
T 3rg8_A 132 DK---EIADSVKSYMESNAQKI 150 (159)
T ss_dssp CH---HHHHHHHHHHHHHHHHH
T ss_pred CH---HHHHHHHHHHHHHHHHH
Confidence 67 67777666666555543
No 62
>3oow_A Phosphoribosylaminoimidazole carboxylase,catalyic; structural genomics, center for structural genomics of infec diseases, csgid; HET: MSE; 1.75A {Francisella tularensis subsp} SCOP: c.23.8.1 PDB: 3opq_A*
Probab=77.95 E-value=11 Score=30.77 Aligned_cols=145 Identities=13% Similarity=0.153 Sum_probs=78.1
Q ss_pred eEEeccCCCcCCCHHHHHHHHHHHHhCCCcEEEEEeCCCCccccCCChhHHhhccCCCeEecCCCCHHhhhCccCcceEE
Q 044031 272 VVFLCFGSRGTFSAPQLKEIAIGLERSNQRFLWVVRNPSNAAEAELPEGFLERTKERGLVVKSWAPQSTILGHESVGGFV 351 (468)
Q Consensus 272 ~v~vs~GS~~~~~~~~~~~~~~al~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~pq~~il~~~~~~~~i 351 (468)
.|-|-+||.+ +.+..++....|+..|..+=.-+-+. +..|+.+.+ |+.+ +....+++||
T Consensus 7 ~V~IimgS~S--D~~v~~~a~~~l~~~gi~~ev~V~Sa-----HRtp~~l~~-----------~~~~---~~~~g~~ViI 65 (166)
T 3oow_A 7 QVGVIMGSKS--DWSTMKECCDILDNLGIGYECEVVSA-----HRTPDKMFD-----------YAET---AKERGLKVII 65 (166)
T ss_dssp EEEEEESSGG--GHHHHHHHHHHHHHTTCEEEEEECCT-----TTCHHHHHH-----------HHHH---TTTTTCCEEE
T ss_pred eEEEEECcHH--hHHHHHHHHHHHHHcCCCEEEEEEcC-----cCCHHHHHH-----------HHHH---HHhCCCcEEE
Confidence 5667788885 56777888899999998765444443 445554332 1111 1111223388
Q ss_pred ecCCcchHHHHHHh---CCcEEecccccch--hhHHHHHHhhc--ceeeeeccCCcccccCCCCccccHHHHHHHHHHHh
Q 044031 352 THCGWSSVVEAVTY---GVPMIAWPLYAEQ--FLNSVALVQEM--KVAMPMFLNGEEETIGNGEGVVSAERVEERVRELM 424 (468)
Q Consensus 352 thgG~~s~~eal~~---GvP~v~~P~~~DQ--~~na~~~~~~~--g~g~~~~~~~~~~~~~~~~~~~~~~~l~~av~~~l 424 (468)
.=+|...-+-++.+ -+|+|++|..... -..+-.-.-+. |+++..-. ..+.+..++.-+...|.. +
T Consensus 66 a~AG~aa~LpgvvA~~t~~PVIgVP~~~~~l~G~dsLlS~vqmp~gvpVatV~-------I~~ag~~nAa~lAa~Il~-~ 137 (166)
T 3oow_A 66 AGAGGAAHLPGMVAAKTTLPVLGVPVKSSTLNGQDSLLSIVQMPAGIPVATFA-------IGMAGAKNAALFAASILQ-H 137 (166)
T ss_dssp EEECSSCCHHHHHHHTCSSCEEEEECCCTTTTTHHHHHHHHTCCTTSCCEECC-------STHHHHHHHHHHHHHHHG-G
T ss_pred EECCcchhhHHHHHhccCCCEEEeecCcCCCCCHHHHHHHhcCCCCCceEEEe-------cCCccchHHHHHHHHHHc-C
Confidence 87775543333333 4899999984321 11111100112 54444321 010022455555544433 3
Q ss_pred cCchhHHHHHHHHHHHHHHHHhhc
Q 044031 425 MGSEGKALRERSLEMRMMAATAWN 448 (468)
Q Consensus 425 ~~~~~~~~~~~a~~l~~~~~~a~~ 448 (468)
.|+ +++++.+.+++..++.+.
T Consensus 138 ~d~---~l~~kl~~~r~~~~~~v~ 158 (166)
T 3oow_A 138 TDI---NIAKALAEFRAEQTRFVL 158 (166)
T ss_dssp GCH---HHHHHHHHHHHHHHHHHH
T ss_pred CCH---HHHHHHHHHHHHHHHHHH
Confidence 577 788888888888777665
No 63
>3dfz_A SIRC, precorrin-2 dehydrogenase; NAD dehydrogenase, cobalamin biosynthesis, NAD, oxidoreducta porphyrin biosynthesis; 2.30A {Bacillus megaterium}
Probab=77.76 E-value=5 Score=34.94 Aligned_cols=152 Identities=13% Similarity=0.058 Sum_probs=77.5
Q ss_pred CceEEeccCCCcCCCHHHHHHHHHHHHhCCCcEEEEEeCCCCccccCCChhHHhhccCCCeEecCCCCHHhhhCccCcce
Q 044031 270 GSVVFLCFGSRGTFSAPQLKEIAIGLERSNQRFLWVVRNPSNAAEAELPEGFLERTKERGLVVKSWAPQSTILGHESVGG 349 (468)
Q Consensus 270 ~~~v~vs~GS~~~~~~~~~~~~~~al~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~pq~~il~~~~~~~ 349 (468)
+.++.|+.|.++ ...++.|...|..+.++... +.+.+.......++.+....-+...|...++
T Consensus 32 k~VLVVGgG~va-------~~ka~~Ll~~GA~VtVvap~--------~~~~l~~l~~~~~i~~i~~~~~~~dL~~adL-- 94 (223)
T 3dfz_A 32 RSVLVVGGGTIA-------TRRIKGFLQEGAAITVVAPT--------VSAEINEWEAKGQLRVKRKKVGEEDLLNVFF-- 94 (223)
T ss_dssp CCEEEECCSHHH-------HHHHHHHGGGCCCEEEECSS--------CCHHHHHHHHTTSCEEECSCCCGGGSSSCSE--
T ss_pred CEEEEECCCHHH-------HHHHHHHHHCCCEEEEECCC--------CCHHHHHHHHcCCcEEEECCCCHhHhCCCCE--
Confidence 348888877554 45667777778887765432 2223332222223333222122333555555
Q ss_pred EEecCCcchHHHHHHhCCcEEeccc-ccchhhHHHHHH----hhcceeeeeccCCcccccCCCCccccHHHHHHHHHHHh
Q 044031 350 FVTHCGWSSVVEAVTYGVPMIAWPL-YAEQFLNSVALV----QEMKVAMPMFLNGEEETIGNGEGVVSAERVEERVRELM 424 (468)
Q Consensus 350 ~ithgG~~s~~eal~~GvP~v~~P~-~~DQ~~na~~~~----~~~g~g~~~~~~~~~~~~~~~~~~~~~~~l~~av~~~l 424 (468)
+|.--|--.+.+.++.-.- ..+|. ..|.+..+..+. +.=++-+.+.+ ....-.-+..|++.|++.+
T Consensus 95 VIaAT~d~~~N~~I~~~ak-~gi~VNvvD~p~~~~f~~Paiv~rg~l~iaIST--------~G~sP~la~~iR~~ie~~l 165 (223)
T 3dfz_A 95 IVVATNDQAVNKFVKQHIK-NDQLVNMASSFSDGNIQIPAQFSRGRLSLAIST--------DGASPLLTKRIKEDLSSNY 165 (223)
T ss_dssp EEECCCCTHHHHHHHHHSC-TTCEEEC-----CCSEECCEEEEETTEEEEEEC--------TTSCHHHHHHHHHHHHHHS
T ss_pred EEECCCCHHHHHHHHHHHh-CCCEEEEeCCcccCeEEEeeEEEeCCEEEEEEC--------CCCCcHHHHHHHHHHHHHc
Confidence 8888887777766665333 44444 245555543221 11123333332 1111234456777777777
Q ss_pred cCchhHHHHHHHHHHHHHHHHhhc
Q 044031 425 MGSEGKALRERSLEMRMMAATAWN 448 (468)
Q Consensus 425 ~~~~~~~~~~~a~~l~~~~~~a~~ 448 (468)
. +....+-+.+.++++.+++...
T Consensus 166 p-~~~~~~~~~~~~~R~~vk~~~~ 188 (223)
T 3dfz_A 166 D-ESYTQYTQFLYECRVLIHRLNV 188 (223)
T ss_dssp C-THHHHHHHHHHHHHHHHHHCCS
T ss_pred c-HHHHHHHHHHHHHHHHHHHHCC
Confidence 3 3345677888888888887544
No 64
>4grd_A N5-CAIR mutase, phosphoribosylaminoimidazole carboxylase catalyti; ssgcid, NIH, niaid, SBRI, UW, emerald biostructures; 1.85A {Burkholderia cenocepacia}
Probab=76.59 E-value=15 Score=30.10 Aligned_cols=146 Identities=16% Similarity=0.221 Sum_probs=76.7
Q ss_pred CCceEEeccCCCcCCCHHHHHHHHHHHHhCCCcEEEEEeCCCCccccCCChhHHhhccCCCeEecCCCCHHhhhCccCcc
Q 044031 269 SGSVVFLCFGSRGTFSAPQLKEIAIGLERSNQRFLWVVRNPSNAAEAELPEGFLERTKERGLVVKSWAPQSTILGHESVG 348 (468)
Q Consensus 269 ~~~~v~vs~GS~~~~~~~~~~~~~~al~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~pq~~il~~~~~~ 348 (468)
+.|.|-|-+||.+ +....++....|+..|.++=.-+-+. +..|+.+.+ |+.... ...++
T Consensus 11 ~~P~V~IimGS~S--D~~v~~~a~~~l~~~gi~~ev~V~sa-----HR~p~~l~~-----------~~~~a~---~~g~~ 69 (173)
T 4grd_A 11 SAPLVGVLMGSSS--DWDVMKHAVAILQEFGVPYEAKVVSA-----HRMPDEMFD-----------YAEKAR---ERGLR 69 (173)
T ss_dssp SSCSEEEEESSGG--GHHHHHHHHHHHHHTTCCEEEEECCT-----TTSHHHHHH-----------HHHHHT---TTTCS
T ss_pred CCCeEEEEeCcHh--HHHHHHHHHHHHHHcCCCEEEEEEcc-----ccCHHHHHH-----------HHHHHH---hcCCe
Confidence 3457888889986 56777888999999998865444443 445554331 111111 11222
Q ss_pred eEEecCCcc----hHHHHHHhCCcEEecccccch--hhHH-HHHHhhc--ceeeeeccCCcccccCCCCccccHHHHHHH
Q 044031 349 GFVTHCGWS----SVVEAVTYGVPMIAWPLYAEQ--FLNS-VALVQEM--KVAMPMFLNGEEETIGNGEGVVSAERVEER 419 (468)
Q Consensus 349 ~~ithgG~~----s~~eal~~GvP~v~~P~~~DQ--~~na-~~~~~~~--g~g~~~~~~~~~~~~~~~~~~~~~~~l~~a 419 (468)
+||.-.|.- ++..+ .--+|+|++|....- -..+ .-+. ++ |+.+..-. .+.++..++.-++..
T Consensus 70 ViIa~AG~aahLpgvvA~-~t~~PVIgVPv~~~~l~G~dsLlSiv-qMP~Gvpvatv~-------i~~~~a~NAallA~~ 140 (173)
T 4grd_A 70 AIIAGAGGAAHLPGMLAA-KTTVPVLGVPVASKYLKGVDSLHSIV-QMPKGVPVATFA-------IGEAGAANAALFAVS 140 (173)
T ss_dssp EEEEEEESSCCHHHHHHH-HCCSCEEEEEECCTTTTTHHHHHHHH-CCCTTSCCEECC-------SSHHHHHHHHHHHHH
T ss_pred EEEEeccccccchhhhee-cCCCCEEEEEcCCCCCCchhHHHHHH-hCCCCCCceEEe-------cCCcchHHHHHHHHH
Confidence 366655543 33333 336999999974321 1111 1121 22 44433321 011122344444443
Q ss_pred HHHHhcCchhHHHHHHHHHHHHHHHHhhc
Q 044031 420 VRELMMGSEGKALRERSLEMRMMAATAWN 448 (468)
Q Consensus 420 v~~~l~~~~~~~~~~~a~~l~~~~~~a~~ 448 (468)
|-. +.|+ +++++.+.+++..++.+.
T Consensus 141 ILa-~~d~---~l~~kl~~~r~~~~~~v~ 165 (173)
T 4grd_A 141 ILS-GNSV---DYANRLAAFRVRQNEAAH 165 (173)
T ss_dssp HHT-TSCH---HHHHHHHHHHHHHHHHHH
T ss_pred HHc-CCCH---HHHHHHHHHHHHHHHHHH
Confidence 322 3577 788888877777776544
No 65
>1uqt_A Alpha, alpha-trehalose-phosphate synthase; glycosyltransferase, transferase; HET: U2F; 2.0A {Escherichia coli} SCOP: c.87.1.6 PDB: 1uqu_A* 2wtx_A* 1gz5_A*
Probab=76.35 E-value=21 Score=35.02 Aligned_cols=73 Identities=11% Similarity=0.021 Sum_probs=48.6
Q ss_pred ecCCCCHHh---hhCccCcceEEe---cCCcc-hHHHHHHhCC-----cEEecccccchhhHHHHHHhhcceeeeeccCC
Q 044031 332 VKSWAPQST---ILGHESVGGFVT---HCGWS-SVVEAVTYGV-----PMIAWPLYAEQFLNSVALVQEMKVAMPMFLNG 399 (468)
Q Consensus 332 v~~~~pq~~---il~~~~~~~~it---hgG~~-s~~eal~~Gv-----P~v~~P~~~DQ~~na~~~~~~~g~g~~~~~~~ 399 (468)
+.+++++.+ ++..+++ ||. +=|.| ++.||+++|+ |+|+--..+--.. +.-|+.+++
T Consensus 336 ~~g~v~~~el~~ly~~ADv--~v~pS~~EGfgLv~lEAmA~g~~~~~gpvV~S~~~G~~~~--------l~~g~lv~p-- 403 (482)
T 1uqt_A 336 LNQHFDRKLLMKIFRYSDV--GLVTPLRDGMNLVAKEYVAAQDPANPGVLVLSQFAGAANE--------LTSALIVNP-- 403 (482)
T ss_dssp ECSCCCHHHHHHHHHHCSE--EEECCSSBSCCHHHHHHHHHSCTTSCCEEEEETTBGGGGT--------CTTSEEECT--
T ss_pred eCCCCCHHHHHHHHHHccE--EEECCCcccCCchHHHHHHhCCCCCCCCEEEECCCCCHHH--------hCCeEEECC--
Confidence 457888775 4556666 553 33555 8999999998 6666544331111 124666764
Q ss_pred cccccCCCCccccHHHHHHHHHHHhcCc
Q 044031 400 EEETIGNGEGVVSAERVEERVRELMMGS 427 (468)
Q Consensus 400 ~~~~~~~~~~~~~~~~l~~av~~~l~~~ 427 (468)
.+.+.++++|.++|+++
T Consensus 404 -----------~d~~~lA~ai~~lL~~~ 420 (482)
T 1uqt_A 404 -----------YDRDEVAAALDRALTMS 420 (482)
T ss_dssp -----------TCHHHHHHHHHHHHTCC
T ss_pred -----------CCHHHHHHHHHHHHcCC
Confidence 57889999999999864
No 66
>3trh_A Phosphoribosylaminoimidazole carboxylase carboxyltransferase subunit; purines, pyrimidines, nucleosides, nucleotides, lyase; 2.20A {Coxiella burnetii}
Probab=74.34 E-value=26 Score=28.68 Aligned_cols=145 Identities=12% Similarity=0.150 Sum_probs=76.5
Q ss_pred eEEeccCCCcCCCHHHHHHHHHHHHhCCCcEEEEEeCCCCccccCCChhHHhhccCCCeEecCCCCHHhhhCccCcceEE
Q 044031 272 VVFLCFGSRGTFSAPQLKEIAIGLERSNQRFLWVVRNPSNAAEAELPEGFLERTKERGLVVKSWAPQSTILGHESVGGFV 351 (468)
Q Consensus 272 ~v~vs~GS~~~~~~~~~~~~~~al~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~pq~~il~~~~~~~~i 351 (468)
.|-|-+||.+ +.+..++....|+..|.++=.-+-+. +..|+.+. +|+.... -...+ +||
T Consensus 8 ~V~IimgS~S--D~~v~~~a~~~l~~~gi~~ev~V~Sa-----HR~p~~~~-----------~~~~~a~-~~g~~--ViI 66 (169)
T 3trh_A 8 FVAILMGSDS--DLSTMETAFTELKSLGIPFEAHILSA-----HRTPKETV-----------EFVENAD-NRGCA--VFI 66 (169)
T ss_dssp EEEEEESCGG--GHHHHHHHHHHHHHTTCCEEEEECCT-----TTSHHHHH-----------HHHHHHH-HTTEE--EEE
T ss_pred cEEEEECcHH--hHHHHHHHHHHHHHcCCCEEEEEEcc-----cCCHHHHH-----------HHHHHHH-hCCCc--EEE
Confidence 6777788885 56777888899999998865544443 44555433 1111111 11223 388
Q ss_pred ecCCcchHHHHHHh---CCcEEecccccch--hhHHHH-HHh-hcceeeeeccCCcccccCCCCccccHHHHHHHHHHHh
Q 044031 352 THCGWSSVVEAVTY---GVPMIAWPLYAEQ--FLNSVA-LVQ-EMKVAMPMFLNGEEETIGNGEGVVSAERVEERVRELM 424 (468)
Q Consensus 352 thgG~~s~~eal~~---GvP~v~~P~~~DQ--~~na~~-~~~-~~g~g~~~~~~~~~~~~~~~~~~~~~~~l~~av~~~l 424 (468)
.=+|...-+-++.+ -+|+|++|...-. -..+-. +.+ --|+.+..-. ..+.+.+++.-+...|.. +
T Consensus 67 a~AG~aa~LpgvvA~~t~~PVIgVP~~~~~l~G~dsLlS~vqmp~GvPVatV~-------I~~a~~~nAa~lAa~Il~-~ 138 (169)
T 3trh_A 67 AAAGLAAHLAGTIAAHTLKPVIGVPMAGGSLGGLDALLSTVQMPGGVPVACTA-------IGKAGAKNAAILAAQIIA-L 138 (169)
T ss_dssp EEECSSCCHHHHHHHTCSSCEEEEECCCSTTTTHHHHHHHHCCCTTSCCEECC-------STHHHHHHHHHHHHHHHH-T
T ss_pred EECChhhhhHHHHHhcCCCCEEEeecCCCCCCCHHHHHHhhcCCCCCceEEEe-------cCCccchHHHHHHHHHHc-C
Confidence 87775544333333 4899999985321 112111 111 0144322210 011122455555544433 3
Q ss_pred cCchhHHHHHHHHHHHHHHHHhhc
Q 044031 425 MGSEGKALRERSLEMRMMAATAWN 448 (468)
Q Consensus 425 ~~~~~~~~~~~a~~l~~~~~~a~~ 448 (468)
.|+ +++++.+.+++..++.+.
T Consensus 139 ~d~---~l~~kl~~~r~~~~~~v~ 159 (169)
T 3trh_A 139 QDK---SIAQKLVQQRTAKRETLK 159 (169)
T ss_dssp TCH---HHHHHHHHHHHHHHHHHH
T ss_pred CCH---HHHHHHHHHHHHHHHHHH
Confidence 577 677777777777766554
No 67
>3ors_A N5-carboxyaminoimidazole ribonucleotide mutase; isomerase, isomerase,biosynthetic protein; 1.45A {Staphylococcus aureus subsp}
Probab=73.56 E-value=21 Score=29.02 Aligned_cols=145 Identities=14% Similarity=0.178 Sum_probs=75.0
Q ss_pred eEEeccCCCcCCCHHHHHHHHHHHHhCCCcEEEEEeCCCCccccCCChhHHhhccCCCeEecCCCCHHhhhCccCcceEE
Q 044031 272 VVFLCFGSRGTFSAPQLKEIAIGLERSNQRFLWVVRNPSNAAEAELPEGFLERTKERGLVVKSWAPQSTILGHESVGGFV 351 (468)
Q Consensus 272 ~v~vs~GS~~~~~~~~~~~~~~al~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~pq~~il~~~~~~~~i 351 (468)
.|-|-+||.+ +.+..++....|+..|.++=.-+-+. +..|+.+.+ |+.+ .....+++||
T Consensus 5 ~V~Iimgs~S--D~~v~~~a~~~l~~~gi~~ev~V~Sa-----HR~p~~~~~-----------~~~~---a~~~g~~ViI 63 (163)
T 3ors_A 5 KVAVIMGSSS--DWKIMQESCNMLDYFEIPYEKQVVSA-----HRTPKMMVQ-----------FASE---ARERGINIII 63 (163)
T ss_dssp CEEEEESCGG--GHHHHHHHHHHHHHTTCCEEEEECCT-----TTSHHHHHH-----------HHHH---TTTTTCCEEE
T ss_pred eEEEEECcHH--HHHHHHHHHHHHHHcCCCEEEEEECC-----cCCHHHHHH-----------HHHH---HHhCCCcEEE
Confidence 5666678875 56777888899999998864444433 445554332 1100 0111122377
Q ss_pred ecCCcchHHHHHH---hCCcEEecccccchh--hHHH-HHHh-hcceeeeeccCCcccccCCCCccccHHHHHHHHHHHh
Q 044031 352 THCGWSSVVEAVT---YGVPMIAWPLYAEQF--LNSV-ALVQ-EMKVAMPMFLNGEEETIGNGEGVVSAERVEERVRELM 424 (468)
Q Consensus 352 thgG~~s~~eal~---~GvP~v~~P~~~DQ~--~na~-~~~~-~~g~g~~~~~~~~~~~~~~~~~~~~~~~l~~av~~~l 424 (468)
.=+|...-+-++. --+|+|++|....-. ..+- -+.+ --|+.+..-. ..+.+-.++.-+...|..+
T Consensus 64 a~AG~aa~LpgvvA~~t~~PVIgVP~~~~~l~G~dsLlS~vqmp~GvPVatV~-------I~~a~~~nAa~lAa~Il~~- 135 (163)
T 3ors_A 64 AGAGGAAHLPGMVASLTTLPVIGVPIETKSLKGIDSLLSIVQMPGGIPVATTA-------IGAAGAKNAGILAARMLSI- 135 (163)
T ss_dssp EEEESSCCHHHHHHHHCSSCEEEEEECCTTTTTHHHHHHHHTCCTTSCCEECC-------STHHHHHHHHHHHHHHHHT-
T ss_pred EECCchhhhHHHHHhccCCCEEEeeCCCCCCCCHHHHHHHhhCCCCCceEEEE-------cCCcccHHHHHHHHHHHhC-
Confidence 7776543333322 458999999853311 1111 1111 1144222211 0110224555555544433
Q ss_pred cCchhHHHHHHHHHHHHHHHHhhc
Q 044031 425 MGSEGKALRERSLEMRMMAATAWN 448 (468)
Q Consensus 425 ~~~~~~~~~~~a~~l~~~~~~a~~ 448 (468)
.|+ +++++.+.+++..++.+.
T Consensus 136 ~d~---~l~~kl~~~r~~~~~~v~ 156 (163)
T 3ors_A 136 QNP---SLVEKLNQYESSLIQKVE 156 (163)
T ss_dssp TCT---HHHHHHHHHHHHHHHHHH
T ss_pred CCH---HHHHHHHHHHHHHHHHHH
Confidence 577 677777777777666543
No 68
>3kuu_A Phosphoribosylaminoimidazole carboxylase catalyti PURE; 3-layer (ABA) sandwich, rossmann fold, csgid, lyase, structu genomics; 1.41A {Yersinia pestis} SCOP: c.23.8.1 PDB: 1d7a_A* 1qcz_A 2ate_A* 2nsl_A* 2nsh_A* 2nsj_A*
Probab=73.19 E-value=15 Score=30.20 Aligned_cols=144 Identities=16% Similarity=0.187 Sum_probs=77.0
Q ss_pred eEEeccCCCcCCCHHHHHHHHHHHHhCCCcEEEEEeCCCCccccCCChhHHhhccCCCeEecCCCCHHhhhCccCcceEE
Q 044031 272 VVFLCFGSRGTFSAPQLKEIAIGLERSNQRFLWVVRNPSNAAEAELPEGFLERTKERGLVVKSWAPQSTILGHESVGGFV 351 (468)
Q Consensus 272 ~v~vs~GS~~~~~~~~~~~~~~al~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~pq~~il~~~~~~~~i 351 (468)
.|-|-+||.+ +.+..++....|+..|.++=.-+-+. +..|+.+.+ |+.... -...++ ||
T Consensus 14 ~V~IimGS~S--D~~v~~~a~~~L~~~Gi~~ev~V~Sa-----HR~p~~~~~-----------~~~~a~-~~g~~V--iI 72 (174)
T 3kuu_A 14 KIAIVMGSKS--DWATMQFAADVLTTLNVPFHVEVVSA-----HRTPDRLFS-----------FAEQAE-ANGLHV--II 72 (174)
T ss_dssp CEEEEESSGG--GHHHHHHHHHHHHHTTCCEEEEECCT-----TTCHHHHHH-----------HHHHTT-TTTCSE--EE
T ss_pred cEEEEECcHH--HHHHHHHHHHHHHHcCCCEEEEEEcc-----cCCHHHHHH-----------HHHHHH-hCCCcE--EE
Confidence 5667778875 56777888899999998865444443 445554332 111000 011233 77
Q ss_pred ecCCcchHHHHHHh---CCcEEecccccch--hhHHHH-HHhhc--ceeeeeccCCcccccCCCCccccHHHHHHHHHHH
Q 044031 352 THCGWSSVVEAVTY---GVPMIAWPLYAEQ--FLNSVA-LVQEM--KVAMPMFLNGEEETIGNGEGVVSAERVEERVREL 423 (468)
Q Consensus 352 thgG~~s~~eal~~---GvP~v~~P~~~DQ--~~na~~-~~~~~--g~g~~~~~~~~~~~~~~~~~~~~~~~l~~av~~~ 423 (468)
.=+|...-+-++.+ -+|+|++|...-- -..+-. +. ++ |+.+..-. ..+.+..++.-+...|..
T Consensus 73 a~AG~aa~LpgvvA~~t~~PVIgVP~~~~~l~G~dsLlS~v-qmP~GvPVatV~-------I~~a~~~nAa~lAa~ILa- 143 (174)
T 3kuu_A 73 AGNGGAAHLPGMLAAKTLVPVLGVPVQSAALSGVDSLYSIV-QMPRGIPVGTLA-------IGKAGAANAALLAAQILA- 143 (174)
T ss_dssp EEEESSCCHHHHHHHTCSSCEEEEEECCTTTTTHHHHHHHH-TCCTTSCCEECC-------SSHHHHHHHHHHHHHHHH-
T ss_pred EECChhhhhHHHHHhccCCCEEEeeCCCCCCCCHHHHHHhh-hCCCCCeeEEEE-------eCCccchHHHHHHHHHHc-
Confidence 77775433333332 4899999985321 112111 11 22 44322211 011122445555544433
Q ss_pred hcCchhHHHHHHHHHHHHHHHHhhc
Q 044031 424 MMGSEGKALRERSLEMRMMAATAWN 448 (468)
Q Consensus 424 l~~~~~~~~~~~a~~l~~~~~~a~~ 448 (468)
+.|+ +++++.+.+++..++.+.
T Consensus 144 ~~d~---~l~~kl~~~r~~~~~~v~ 165 (174)
T 3kuu_A 144 LHDT---ELAGRLAHWRQSQTDDVL 165 (174)
T ss_dssp TTCH---HHHHHHHHHHHHHHHHHH
T ss_pred CCCH---HHHHHHHHHHHHHHHHHH
Confidence 3577 788888888888777665
No 69
>3lp6_A Phosphoribosylaminoimidazole carboxylase catalyti; alpha and beta protein, structural genomics, PSI-2, protein initiative; 1.70A {Mycobacterium tuberculosis} SCOP: c.23.8.0
Probab=73.02 E-value=37 Score=27.94 Aligned_cols=144 Identities=19% Similarity=0.179 Sum_probs=77.2
Q ss_pred ceEEeccCCCcCCCHHHHHHHHHHHHhCCCcEEEEEeCCCCccccCCChhHHhhccCCCeEecCCCCHHhhhCccCcceE
Q 044031 271 SVVFLCFGSRGTFSAPQLKEIAIGLERSNQRFLWVVRNPSNAAEAELPEGFLERTKERGLVVKSWAPQSTILGHESVGGF 350 (468)
Q Consensus 271 ~~v~vs~GS~~~~~~~~~~~~~~al~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~pq~~il~~~~~~~~ 350 (468)
+.|-|-+||.+ +.+..++....|+..|.++=.-+-+. +..|+.+. +|+.... -...++ |
T Consensus 8 ~~V~IimgS~S--D~~v~~~a~~~L~~~gi~~ev~V~Sa-----HR~p~~~~-----------~~~~~a~-~~g~~V--i 66 (174)
T 3lp6_A 8 PRVGVIMGSDS--DWPVMADAAAALAEFDIPAEVRVVSA-----HRTPEAMF-----------SYARGAA-ARGLEV--I 66 (174)
T ss_dssp CSEEEEESCGG--GHHHHHHHHHHHHHTTCCEEEEECCT-----TTCHHHHH-----------HHHHHHH-HHTCCE--E
T ss_pred CeEEEEECcHH--hHHHHHHHHHHHHHcCCCEEEEEECC-----CCCHHHHH-----------HHHHHHH-hCCCCE--E
Confidence 35667778875 56777888899999998865444433 44555433 2211111 112333 7
Q ss_pred EecCCcchHHHHHH---hCCcEEecccccc--hhhHHHHHHhhc--ceeeeeccCCcccccCCCCccccHHHHHHHHHHH
Q 044031 351 VTHCGWSSVVEAVT---YGVPMIAWPLYAE--QFLNSVALVQEM--KVAMPMFLNGEEETIGNGEGVVSAERVEERVREL 423 (468)
Q Consensus 351 ithgG~~s~~eal~---~GvP~v~~P~~~D--Q~~na~~~~~~~--g~g~~~~~~~~~~~~~~~~~~~~~~~l~~av~~~ 423 (468)
|.=+|...-+-++. --+|+|++|.... .-..+-.-.-+. |+.+..-. =++..++..+...|..+
T Consensus 67 Ia~AG~aa~LpgvvA~~t~~PVIgVP~~~~~l~G~daLlS~vqmp~GvpVatV~---------I~~~~nAa~lAa~Il~~ 137 (174)
T 3lp6_A 67 IAGAGGAAHLPGMVAAATPLPVIGVPVPLGRLDGLDSLLSIVQMPAGVPVATVS---------IGGAGNAGLLAVRMLGA 137 (174)
T ss_dssp EEEEESSCCHHHHHHHHCSSCEEEEEECCSSGGGHHHHHHHHCCCTTCCCEECC---------TTCHHHHHHHHHHHHHT
T ss_pred EEecCchhhhHHHHHhccCCCEEEeeCCCCCCCCHHHHHHHhhCCCCCeeEEEE---------cCcchHHHHHHHHHHhC
Confidence 77776543333322 4589999998532 111211111112 43333221 01225666666555433
Q ss_pred hcCchhHHHHHHHHHHHHHHHHhhc
Q 044031 424 MMGSEGKALRERSLEMRMMAATAWN 448 (468)
Q Consensus 424 l~~~~~~~~~~~a~~l~~~~~~a~~ 448 (468)
.|+ +++++.+.+++..++.+.
T Consensus 138 -~d~---~l~~kl~~~r~~~~~~v~ 158 (174)
T 3lp6_A 138 -ANP---QLRARIVAFQDRLADVVA 158 (174)
T ss_dssp -TCH---HHHHHHHHHHHHHHHHHH
T ss_pred -CCH---HHHHHHHHHHHHHHHHHH
Confidence 577 677777777777776554
No 70
>3qjg_A Epidermin biosynthesis protein EPID; structural genomics, center for structural genomics of infec diseases, csgid, oxidoreductase; HET: FMN; 2.04A {Staphylococcus aureus} SCOP: c.34.1.0
Probab=72.00 E-value=4.1 Score=33.96 Aligned_cols=39 Identities=3% Similarity=0.024 Sum_probs=32.3
Q ss_pred CcceEEEecCCCccCHHHHHHHHHHHHhCCCCcEEEEEeCCC
Q 044031 1 MKKTIALYPGPAFHHMISMVELGKLILQHRSDVSITILVPSM 42 (468)
Q Consensus 1 m~~~Iv~~~~~~~GHv~P~l~LA~~L~~~G~~h~Vt~~~~~~ 42 (468)
|++||++.-.|+.|=+. .+.+.+.|+++| ++|.++.+..
T Consensus 4 m~k~IllgvTGs~aa~k-~~~ll~~L~~~g--~~V~vv~T~~ 42 (175)
T 3qjg_A 4 MGENVLICLCGSVNSIN-ISHYIIELKSKF--DEVNVIASTN 42 (175)
T ss_dssp -CCEEEEEECSSGGGGG-HHHHHHHHTTTC--SEEEEEECTG
T ss_pred CCCEEEEEEeCHHHHHH-HHHHHHHHHHCC--CEEEEEECcC
Confidence 66789988888877765 899999999999 9999997654
No 71
>3lrx_A Putative hydrogenase; alpha-beta protein, structural genomics, PSI-2, protein structure initiative, northeast structural genomics consortium; 2.60A {Pyrococcus furiosus}
Probab=70.86 E-value=32 Score=27.74 Aligned_cols=48 Identities=8% Similarity=-0.060 Sum_probs=34.2
Q ss_pred eEEEecCCCccCHHHHHHHHHHHHhCCCCcEEEEEeCCCCCCchhhhhhhhcc
Q 044031 4 TIALYPGPAFHHMISMVELGKLILQHRSDVSITILVPSMPLEESKTCSYINSI 56 (468)
Q Consensus 4 ~Iv~~~~~~~GHv~P~l~LA~~L~~~G~~h~Vt~~~~~~~~~~~~~~~~~~~~ 56 (468)
+++++..|+ | +.|++.+++.|.++| .+|+++ .....+...+.+.++.+
T Consensus 25 ~~llIaGG~-G-ItPl~sm~~~l~~~~--~~v~l~-g~r~~~d~~~~~el~~l 72 (158)
T 3lrx_A 25 KILAIGAYT-G-IVEVYPIAKAWQEIG--NDVTTL-HVTFEPMVILKEELEKA 72 (158)
T ss_dssp EEEEEEETT-H-HHHHHHHHHHHHHHT--CEEEEE-EECBGGGCCSHHHHHHH
T ss_pred eEEEEEccC-c-HHHHHHHHHHHHhcC--CcEEEE-EeCCHHHhhHHHHHHHH
Confidence 577777555 3 899999999999998 899998 65544444444444444
No 72
>3lyu_A Putative hydrogenase; the C-terminal has AN alpha-beta fold, structural genomics, PSI-2, protein structure initiative; 2.30A {Pyrococcus furiosus}
Probab=68.63 E-value=33 Score=27.13 Aligned_cols=48 Identities=8% Similarity=-0.060 Sum_probs=33.4
Q ss_pred eEEEecCCCccCHHHHHHHHHHHHhCCCCcEEEEEeCCCCCCchhhhhhhhcc
Q 044031 4 TIALYPGPAFHHMISMVELGKLILQHRSDVSITILVPSMPLEESKTCSYINSI 56 (468)
Q Consensus 4 ~Iv~~~~~~~GHv~P~l~LA~~L~~~G~~h~Vt~~~~~~~~~~~~~~~~~~~~ 56 (468)
+++++..|+ =+.|++.+++.|.++| .+|+++ .....+...+.+.++.+
T Consensus 20 ~~llIaGG~--GiaPl~sm~~~l~~~~--~~v~l~-g~R~~~~~~~~~el~~l 67 (142)
T 3lyu_A 20 KILAIGAYT--GIVEVYPIAKAWQEIG--NDVTTL-HVTFEPMVILKEELEKA 67 (142)
T ss_dssp EEEEEEETT--HHHHHHHHHHHHHHTT--CEEEEE-EEEEGGGCCSHHHHHTT
T ss_pred eEEEEECcC--cHHHHHHHHHHHHhcC--CcEEEE-EeCCHHHhhHHHHHHHH
Confidence 577777555 3899999999999999 889998 54443333344444443
No 73
>1u11_A PURE (N5-carboxyaminoimidazole ribonucleotide MUT; acidophIle, protein stability, lyase; HET: CIT; 1.55A {Acetobacter aceti} SCOP: c.23.8.1 PDB: 2fwj_A* 2fw1_A* 2fwb_A 2fwa_A 2fw9_A 2fw7_A 2fw6_A 2fwp_A* 2fwi_A* 2fw8_A
Probab=68.47 E-value=50 Score=27.36 Aligned_cols=144 Identities=15% Similarity=0.186 Sum_probs=79.4
Q ss_pred eEEeccCCCcCCCHHHHHHHHHHHHhCCCcEEEEEeCCCCccccCCChhHHhhccCCCeEecCCCCHHhhhCccCcceEE
Q 044031 272 VVFLCFGSRGTFSAPQLKEIAIGLERSNQRFLWVVRNPSNAAEAELPEGFLERTKERGLVVKSWAPQSTILGHESVGGFV 351 (468)
Q Consensus 272 ~v~vs~GS~~~~~~~~~~~~~~al~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~pq~~il~~~~~~~~i 351 (468)
.|-|-+||.+ +.+..++....|+..|.++=.-+-+. +..|+.+.+ |+.+.. -...++ ||
T Consensus 23 ~V~IimGS~S--D~~v~~~a~~~L~~~Gi~~dv~V~Sa-----HR~p~~l~~-----------~~~~a~-~~g~~V--iI 81 (182)
T 1u11_A 23 VVGIIMGSQS--DWETMRHADALLTELEIPHETLIVSA-----HRTPDRLAD-----------YARTAA-ERGLNV--II 81 (182)
T ss_dssp SEEEEESSGG--GHHHHHHHHHHHHHTTCCEEEEECCT-----TTCHHHHHH-----------HHHHTT-TTTCCE--EE
T ss_pred EEEEEECcHH--HHHHHHHHHHHHHHcCCCeEEEEEcc-----cCCHHHHHH-----------HHHHHH-hCCCcE--EE
Confidence 5667778875 66777888999999998865444433 445554331 111100 011233 77
Q ss_pred ecCCcc----hHHHHHHhCCcEEecccccc--hhhHHHH-HHh-hcceeeeeccCCcccccCCCCccccHHHHHHHHHHH
Q 044031 352 THCGWS----SVVEAVTYGVPMIAWPLYAE--QFLNSVA-LVQ-EMKVAMPMFLNGEEETIGNGEGVVSAERVEERVREL 423 (468)
Q Consensus 352 thgG~~----s~~eal~~GvP~v~~P~~~D--Q~~na~~-~~~-~~g~g~~~~~~~~~~~~~~~~~~~~~~~l~~av~~~ 423 (468)
.=+|.. ++..++ .-+|+|++|.... .-..+-. +.+ --|+.+..-. ..+.+..++.-+...|. -
T Consensus 82 a~AG~aa~LpgvvA~~-t~~PVIgVP~~~~~l~G~dsLlSivqmP~GvpVatV~-------I~~a~~~nAallAaqIl-a 152 (182)
T 1u11_A 82 AGAGGAAHLPGMCAAW-TRLPVLGVPVESRALKGMDSLLSIVQMPGGVPVGTLA-------IGASGAKNAALLAASIL-A 152 (182)
T ss_dssp EEEESSCCHHHHHHHH-CSSCEEEEEECCTTTTTHHHHHHHHCCCTTSCCEECC-------SSHHHHHHHHHHHHHHH-G
T ss_pred EecCchhhhHHHHHhc-cCCCEEEeeCCCCCCCcHHHHHHHhcCCCCCceEEEe-------cCCccchHHHHHHHHHH-c
Confidence 766644 344444 3699999998542 2222221 222 0155532211 01112245555655554 3
Q ss_pred hcCchhHHHHHHHHHHHHHHHHhhc
Q 044031 424 MMGSEGKALRERSLEMRMMAATAWN 448 (468)
Q Consensus 424 l~~~~~~~~~~~a~~l~~~~~~a~~ 448 (468)
+.|+ +++++.+.+++..++.+.
T Consensus 153 ~~d~---~l~~kL~~~r~~~~~~v~ 174 (182)
T 1u11_A 153 LYNP---ALAARLETWRALQTASVP 174 (182)
T ss_dssp GGCH---HHHHHHHHHHHHHHHHSC
T ss_pred cCCH---HHHHHHHHHHHHHHHHHH
Confidence 4577 788998888888887766
No 74
>3t5t_A Putative glycosyltransferase; GTB fold, pseudoglycosyltransferase; 1.70A {Streptomyces hygroscopicus} PDB: 4f97_A* 4f96_B* 4f9f_A* 3t7d_A*
Probab=66.16 E-value=31 Score=33.92 Aligned_cols=109 Identities=9% Similarity=-0.019 Sum_probs=63.8
Q ss_pred CeEecCCCCHHh---hhCccCcceEEe---cCCcch-HHHHHHhC---CcEEecccccchhhHHHHHHhhcceeeeeccC
Q 044031 329 GLVVKSWAPQST---ILGHESVGGFVT---HCGWSS-VVEAVTYG---VPMIAWPLYAEQFLNSVALVQEMKVAMPMFLN 398 (468)
Q Consensus 329 ~~~v~~~~pq~~---il~~~~~~~~it---hgG~~s-~~eal~~G---vP~v~~P~~~DQ~~na~~~~~~~g~g~~~~~~ 398 (468)
.+++...+|+.+ ++..+++ |+. +=|+|- ..|++++| .|+|+--+.+ .+..+. .-|+.+++
T Consensus 353 ~V~f~g~v~~~el~aly~~ADv--~vv~SlrEGfgLv~~EamA~~~~~g~lVlSe~aG----a~~~l~---~~allVnP- 422 (496)
T 3t5t_A 353 TVRIDNDNDVNHTIACFRRADL--LIFNSTVDGQNLSTFEAPLVNERDADVILSETCG----AAEVLG---EYCRSVNP- 422 (496)
T ss_dssp SEEEEECCCHHHHHHHHHHCSE--EEECCSSBSCCSHHHHHHHHCSSCCEEEEETTBT----THHHHG---GGSEEECT-
T ss_pred CEEEeCCCCHHHHHHHHHhccE--EEECcccccCChhHHHHHHhCCCCCCEEEeCCCC----CHHHhC---CCEEEECC-
Confidence 466667788754 4445666 442 458884 58999996 5665543332 222221 24788875
Q ss_pred CcccccCCCCccccHHHHHHHHHHHhcCchhHHHHHHHHHHHHHHHHhhcCCCCCChHHHHHHHHHHhh
Q 044031 399 GEEETIGNGEGVVSAERVEERVRELMMGSEGKALRERSLEMRMMAATAWNNNDGGSSFTAFSNLFDLWQ 467 (468)
Q Consensus 399 ~~~~~~~~~~~~~~~~~l~~av~~~l~~~~~~~~~~~a~~l~~~~~~a~~~~~~g~~~~~~~~~~~~~~ 467 (468)
.+.+.++++|.++|+++. .++.++.++..+.. . .-....=.++|++.|.
T Consensus 423 ------------~D~~~lA~AI~~aL~m~~----~er~~r~~~~~~~V-~---~~d~~~W~~~fl~~L~ 471 (496)
T 3t5t_A 423 ------------FDLVEQAEAISAALAAGP----RQRAEAAARRRDAA-R---PWTLEAWVQAQLDGLA 471 (496)
T ss_dssp ------------TBHHHHHHHHHHHHHCCH----HHHHHHHHHHHHHH-T---TCBHHHHHHHHHHHHH
T ss_pred ------------CCHHHHHHHHHHHHcCCH----HHHHHHHHHHHHHH-H---HCCHHHHHHHHHHHHh
Confidence 688999999999998762 22223333333332 2 1344455666666653
No 75
>3hyw_A Sulfide-quinone reductase; monotopic membrane protein, flavoprotein, polysulfur, oxidoreductase; HET: FAD DCQ LMT; 2.00A {Aquifex aeolicus} PDB: 3hyv_A* 3hyx_A*
Probab=65.58 E-value=3.9 Score=39.62 Aligned_cols=36 Identities=17% Similarity=0.188 Sum_probs=27.3
Q ss_pred CcceEEEecCCCccCHHHHHHHHHHHHhCCCCcEEEEEeCC
Q 044031 1 MKKTIALYPGPAFHHMISMVELGKLILQHRSDVSITILVPS 41 (468)
Q Consensus 1 m~~~Iv~~~~~~~GHv~P~l~LA~~L~~~G~~h~Vt~~~~~ 41 (468)
|++|||++-.+..| +..|+.|++++++++||++...
T Consensus 1 M~K~VvIIGgG~aG-----l~aA~~L~~~~~~~~VtlI~~~ 36 (430)
T 3hyw_A 1 MAKHVVVIGGGVGG-----IATAYNLRNLMPDLKITLISDR 36 (430)
T ss_dssp -CCEEEEECSSHHH-----HHHHHHHHHHCTTCEEEEECSS
T ss_pred CCCcEEEECCCHHH-----HHHHHHHhccCcCCeEEEEcCC
Confidence 88899999766555 5677888887788999999543
No 76
>4b4k_A N5-carboxyaminoimidazole ribonucleotide mutase; isomerase; 2.50A {Bacillus anthracis}
Probab=65.18 E-value=58 Score=26.91 Aligned_cols=148 Identities=14% Similarity=0.159 Sum_probs=77.4
Q ss_pred CceEEeccCCCcCCCHHHHHHHHHHHHhCCCcEEEEEeCCCCccccCCChhHHhhccCCCeEecCCCCHHhhhCccCcce
Q 044031 270 GSVVFLCFGSRGTFSAPQLKEIAIGLERSNQRFLWVVRNPSNAAEAELPEGFLERTKERGLVVKSWAPQSTILGHESVGG 349 (468)
Q Consensus 270 ~~~v~vs~GS~~~~~~~~~~~~~~al~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~pq~~il~~~~~~~ 349 (468)
+|.|-|-+||.+ +.+..++..+.|+..+..+=..+-+. ...|+.+.+ |+.... ...+++
T Consensus 22 kp~V~IimGS~S--D~~v~~~a~~~L~~~gI~~e~~V~SA-----HRtp~~l~~-----------~~~~a~---~~g~~V 80 (181)
T 4b4k_A 22 KSLVGVIMGSTS--DWETMKYACDILDELNIPYEKKVVSA-----HRTPDYMFE-----------YAETAR---ERGLKV 80 (181)
T ss_dssp CCSEEEEESSGG--GHHHHHHHHHHHHHTTCCEEEEECCT-----TTSHHHHHH-----------HHHHTT---TTTCCE
T ss_pred CccEEEEECCHh--HHHHHHHHHHHHHHcCCCeeEEEEcc-----ccChHHHHH-----------HHHHHH---hcCceE
Confidence 347888899996 56778889999999998865555443 445554331 111100 112223
Q ss_pred EEecCCcchHHHHHH---hCCcEEecccccch---hhHHHHHHhhcceeeeeccCCcccccCCCCccccHHHHHHHHHHH
Q 044031 350 FVTHCGWSSVVEAVT---YGVPMIAWPLYAEQ---FLNSVALVQEMKVAMPMFLNGEEETIGNGEGVVSAERVEERVREL 423 (468)
Q Consensus 350 ~ithgG~~s~~eal~---~GvP~v~~P~~~DQ---~~na~~~~~~~g~g~~~~~~~~~~~~~~~~~~~~~~~l~~av~~~ 423 (468)
+|.=+|.-.-+-++. .-+|+|++|....- .+.---+. ++=.|+.+-... ..+.+..++.-++..|-.
T Consensus 81 iIa~AG~aahLpGvvAa~T~~PVIGVPv~s~~l~G~DsLlSiv-QMP~GvpVaTva-----ig~~ga~NAallA~qILa- 153 (181)
T 4b4k_A 81 IIAGAGGAAHLPGMVAAKTNLPVIGVPVQSKALNGLDSLLSIV-QMPGGVPVATVA-----IGKAGSTNAGLLAAQILG- 153 (181)
T ss_dssp EEEEECSSCCHHHHHHTTCCSCEEEEECCCTTTTTHHHHHHHH-TCCTTCCCEECC-----SSHHHHHHHHHHHHHHHT-
T ss_pred EEEeccccccchhhHHhcCCCCEEEEecCCCCccchhhHHHHH-hCCCCCceEEEe-----cCCccHHHHHHHHHHHHc-
Confidence 777666543333333 35899999986432 22222222 333344432200 011011233333333322
Q ss_pred hcCchhHHHHHHHHHHHHHHHHhhc
Q 044031 424 MMGSEGKALRERSLEMRMMAATAWN 448 (468)
Q Consensus 424 l~~~~~~~~~~~a~~l~~~~~~a~~ 448 (468)
+.|+ +++++.+.+++..++.+.
T Consensus 154 ~~d~---~l~~kl~~~r~~~~~~v~ 175 (181)
T 4b4k_A 154 SFHD---DIHDALELRREAIEKDVR 175 (181)
T ss_dssp TTCH---HHHHHHHHHHHHHHHHHH
T ss_pred cCCH---HHHHHHHHHHHHHHHHHH
Confidence 3467 677777777777766554
No 77
>1ccw_A Protein (glutamate mutase); coenzyme B12, radical reaction, TIM-barrel rossman-fold, isomerase; HET: CNC TAR; 1.60A {Clostridium cochlearium} SCOP: c.23.6.1 PDB: 1cb7_A* 1b1a_A 1i9c_A* 1be1_A 1fmf_A 1id8_A*
Probab=64.08 E-value=7.3 Score=30.91 Aligned_cols=41 Identities=20% Similarity=0.084 Sum_probs=36.4
Q ss_pred Cc-ceEEEecCCCccCHHHHHHHHHHHHhCCCCcEEEEEeCCCC
Q 044031 1 MK-KTIALYPGPAFHHMISMVELGKLILQHRSDVSITILVPSMP 43 (468)
Q Consensus 1 m~-~~Iv~~~~~~~GHv~P~l~LA~~L~~~G~~h~Vt~~~~~~~ 43 (468)
|+ ++|++.+.+.-+|-....-++..|..+| ++|.......+
T Consensus 1 ~~~~~vvla~~~~d~HdiG~~~v~~~l~~~G--~~Vi~lG~~~p 42 (137)
T 1ccw_A 1 MEKKTIVLGVIGSDCHAVGNKILDHAFTNAG--FNVVNIGVLSP 42 (137)
T ss_dssp CCCCEEEEEEETTCCCCHHHHHHHHHHHHTT--CEEEEEEEEEC
T ss_pred CCCCEEEEEeCCCchhHHHHHHHHHHHHHCC--CEEEECCCCCC
Confidence 64 7999999999999999999999999999 99998866444
No 78
>1g63_A Epidermin modifying enzyme EPID; alpha, beta protein, rossmann like fold, oxidoreductase; HET: FMN; 2.50A {Staphylococcus epidermidis} SCOP: c.34.1.1 PDB: 1g5q_A*
Probab=63.28 E-value=5.6 Score=33.34 Aligned_cols=39 Identities=13% Similarity=0.135 Sum_probs=33.1
Q ss_pred CcceEEEecCCCccCHHHHHHHHHHHHhCCCCcEEEEEeCCC
Q 044031 1 MKKTIALYPGPAFHHMISMVELGKLILQHRSDVSITILVPSM 42 (468)
Q Consensus 1 m~~~Iv~~~~~~~GHv~P~l~LA~~L~~~G~~h~Vt~~~~~~ 42 (468)
|++||++.-.|+.|=+ =...+.++|.++| ++|.++.+..
T Consensus 1 ~~k~IllgvTGs~aa~-k~~~l~~~L~~~g--~~V~vv~T~~ 39 (181)
T 1g63_A 1 MYGKLLICATASINVI-NINHYIVELKQHF--DEVNILFSPS 39 (181)
T ss_dssp CCCCEEEEECSCGGGG-GHHHHHHHHTTTS--SCEEEEECGG
T ss_pred CCCEEEEEEECHHHHH-HHHHHHHHHHHCC--CEEEEEEchh
Confidence 7788998888887766 6799999999999 9999996654
No 79
>3vue_A GBSS-I, granule-bound starch synthase 1, chloroplastic/amyloplastic; rossmann fold, glycosyltransferase, transferase; 2.70A {Oryza sativa japonica group} PDB: 3vuf_A*
Probab=62.54 E-value=5.3 Score=40.02 Aligned_cols=36 Identities=6% Similarity=0.156 Sum_probs=27.4
Q ss_pred ceEEEecC--------CCccCHHHHHHHHHHHHhCCCCcEEEEEeCCC
Q 044031 3 KTIALYPG--------PAFHHMISMVELGKLILQHRSDVSITILVPSM 42 (468)
Q Consensus 3 ~~Iv~~~~--------~~~GHv~P~l~LA~~L~~~G~~h~Vt~~~~~~ 42 (468)
|||+++++ |+.|++ .-+|+++|+++| |+|+++++..
T Consensus 10 MkIl~vs~E~~P~~K~GGLadv--v~~L~~aL~~~G--~~V~Vi~P~Y 53 (536)
T 3vue_A 10 MNVVFVGAEMAPWSKTGGLGDV--LGGLPPAMAANG--HRVMVISPRY 53 (536)
T ss_dssp CEEEEECSCBTTTBCSSHHHHH--HHHHHHHHHTTT--CEEEEEEECC
T ss_pred cEEEEEEEeccchhccCcHHHH--HHHHHHHHHHcC--CeEEEEecCc
Confidence 67999974 233333 568999999999 9999998643
No 80
>2x0d_A WSAF; GT4 family, transferase; HET: MSE; 2.28A {Geobacillus stearothermophilus} PDB: 2x0f_A* 2x0e_A*
Probab=60.61 E-value=4.6 Score=38.93 Aligned_cols=39 Identities=13% Similarity=0.169 Sum_probs=29.6
Q ss_pred cceEEEecCC-C----ccCHHHHHHHHHHHHhCCCCcEEEEEeCCC
Q 044031 2 KKTIALYPGP-A----FHHMISMVELGKLILQHRSDVSITILVPSM 42 (468)
Q Consensus 2 ~~~Iv~~~~~-~----~GHv~P~l~LA~~L~~~G~~h~Vt~~~~~~ 42 (468)
++||++++.. . .|=......||++|+++| |+|++++...
T Consensus 46 ~mrI~~v~~~~~p~~~~GG~~~v~~la~~L~~~G--heV~Vvt~~~ 89 (413)
T 2x0d_A 46 GKRLNLLVPSINQEHMFGGISTALKLFEQFDNKK--FKKRIILTDA 89 (413)
T ss_dssp SCEEEEEESCCCGGGCSHHHHHHHHHHTTSCTTT--CEEEEEESSC
T ss_pred CceEEEEeCCCCccccccHHHHHHHHHHHHHHcC--CceEEEEecC
Confidence 3578887743 1 143456899999999999 9999998764
No 81
>3icc_A Putative 3-oxoacyl-(acyl carrier protein) reducta; structural genomics, putative 3-oxoacyl-(acyl carrier protei reductase, oxidoreductase; HET: NAP MES; 1.87A {Bacillus anthracis str}
Probab=57.79 E-value=60 Score=28.09 Aligned_cols=34 Identities=18% Similarity=0.138 Sum_probs=27.2
Q ss_pred cceEEEecCCCccCHHHHHHHHHHHHhCCCCcEEEEEeC
Q 044031 2 KKTIALYPGPAFHHMISMVELGKLILQHRSDVSITILVP 40 (468)
Q Consensus 2 ~~~Iv~~~~~~~GHv~P~l~LA~~L~~~G~~h~Vt~~~~ 40 (468)
+.++++++.++.| =..++|++|+++| ++|.++..
T Consensus 6 ~~k~vlITGas~g---IG~~~a~~l~~~G--~~v~~~~~ 39 (255)
T 3icc_A 6 KGKVALVTGASRG---IGRAIAKRLANDG--ALVAIHYG 39 (255)
T ss_dssp TTCEEEETTCSSH---HHHHHHHHHHHTT--CEEEEEES
T ss_pred CCCEEEEECCCCh---HHHHHHHHHHHCC--CeEEEEeC
Confidence 4578889877765 4678999999999 99988643
No 82
>2bw0_A 10-FTHFDH, 10-formyltetrahydrofolate dehydrogenase; nucleotide biosynthesis, oxidoreductase; 1.7A {Homo sapiens} SCOP: b.46.1.1 c.65.1.1 PDB: 2cfi_A* 1s3i_A
Probab=56.99 E-value=53 Score=30.27 Aligned_cols=33 Identities=9% Similarity=-0.043 Sum_probs=23.1
Q ss_pred CcceEEEecCCCccCHHHHHHHHHHHHhCCCCcEEEEEeC
Q 044031 1 MKKTIALYPGPAFHHMISMVELGKLILQHRSDVSITILVP 40 (468)
Q Consensus 1 m~~~Iv~~~~~~~GHv~P~l~LA~~L~~~G~~h~Vt~~~~ 40 (468)
|+++|+|+. --+-...+.+.|.+.| |+|..+.+
T Consensus 21 ~~mrIvf~G-----~~~fa~~~L~~L~~~~--~~i~~Vvt 53 (329)
T 2bw0_A 21 QSMKIAVIG-----QSLFGQEVYCHLRKEG--HEVVGVFT 53 (329)
T ss_dssp CCCEEEEEC-----CHHHHHHHHHHHHHTT--CEEEEEEE
T ss_pred CCCEEEEEc-----CcHHHHHHHHHHHHCC--CeEEEEEe
Confidence 457899982 2233345678899999 99987765
No 83
>1mio_A Nitrogenase molybdenum iron protein (alpha chain); HET: HCA CFM CLP; 3.00A {Clostridium pasteurianum} SCOP: c.92.2.3
Probab=56.07 E-value=40 Score=33.49 Aligned_cols=33 Identities=12% Similarity=0.051 Sum_probs=27.6
Q ss_pred HHHHHHHHhhhcCCCccEEEe-cCcHHHhhhCCCCeEE
Q 044031 94 SNVFQALENISLTSKILSFII-TSTTSFSYHPNIPTYT 130 (468)
Q Consensus 94 ~~l~~ll~~~~~~~~pD~vI~-~~~~~vA~~lgIP~i~ 130 (468)
..+.+++++. +||++|. .....+|+++|||++.
T Consensus 446 ~el~~~i~~~----~pDl~ig~~~~~~~a~k~gIP~~~ 479 (533)
T 1mio_A 446 HDMEVVLEKL----KPDMFFAGIKEKFVIQKGGVLSKQ 479 (533)
T ss_dssp HHHHHHHHHH----CCSEEEECHHHHHHHHHTTCEEEE
T ss_pred HHHHHHHHhc----CCCEEEcccchhHHHHhcCCCEEE
Confidence 4567777777 9999999 6777899999999984
No 84
>3auf_A Glycinamide ribonucleotide transformylase 1; structural genomics, riken structural genomics/proteomics in RSGI, rossmann fold; 2.07A {Symbiobacterium toebii}
Probab=54.61 E-value=80 Score=27.33 Aligned_cols=104 Identities=6% Similarity=-0.059 Sum_probs=0.0
Q ss_pred cceEEEecCCCccCHHHHHHHHHHHHhC--CCCcEEEEEeCCCCCCchhhhhhhhccccCCCCCeeEEEcCCCCCCCCCC
Q 044031 2 KKTIALYPGPAFHHMISMVELGKLILQH--RSDVSITILVPSMPLEESKTCSYINSISHRLNPIISFYYLPAIQMPSETL 79 (468)
Q Consensus 2 ~~~Iv~~~~~~~GHv~P~l~LA~~L~~~--G~~h~Vt~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~i~~~~lp~~~~ 79 (468)
+++|+|+..++ |+. +.++.+.|.+. + ++|..+.+..+.. .....+ ...+|.+..++...+...
T Consensus 22 ~~rI~~l~SG~-g~~--~~~~l~~l~~~~~~--~~I~~Vvt~~~~~------~~~~~A--~~~gIp~~~~~~~~~~~r-- 86 (229)
T 3auf_A 22 MIRIGVLISGS-GTN--LQAILDGCREGRIP--GRVAVVISDRADA------YGLERA--RRAGVDALHMDPAAYPSR-- 86 (229)
T ss_dssp CEEEEEEESSC-CHH--HHHHHHHHHTTSSS--EEEEEEEESSTTC------HHHHHH--HHTTCEEEECCGGGSSSH--
T ss_pred CcEEEEEEeCC-cHH--HHHHHHHHHhCCCC--CeEEEEEcCCCch------HHHHHH--HHcCCCEEEECcccccch--
Q ss_pred ChhHHHHHHHHHhhHHHHHHHHhhhcCCCccEEEe-----cCcHHHhhhCCCCeEEEecc
Q 044031 80 SRADIAIESIKLNSSNVFQALENISLTSKILSFII-----TSTTSFSYHPNIPTYTYFNS 134 (468)
Q Consensus 80 ~~~~~~~~~~~~~~~~l~~ll~~~~~~~~pD~vI~-----~~~~~vA~~lgIP~i~~~~~ 134 (468)
....+.+.+.++++ +||++|+ .-...+-+.....++-++++
T Consensus 87 ----------~~~~~~~~~~l~~~----~~Dliv~agy~~IL~~~~l~~~~~~~iNiHpS 132 (229)
T 3auf_A 87 ----------TAFDAALAERLQAY----GVDLVCLAGYMRLVRGPMLTAFPNRILNIHPS 132 (229)
T ss_dssp ----------HHHHHHHHHHHHHT----TCSEEEESSCCSCCCHHHHHHSTTCEEEEESS
T ss_pred ----------hhccHHHHHHHHhc----CCCEEEEcChhHhCCHHHHhhccCCEEEEccC
No 85
>3zqu_A Probable aromatic acid decarboxylase; lyase; HET: FNR; 1.50A {Pseudomonas aeruginosa} SCOP: c.34.1.0
Probab=52.94 E-value=19 Score=30.84 Aligned_cols=37 Identities=16% Similarity=0.114 Sum_probs=31.9
Q ss_pred cceEEEecCCCccCHHHHHHHHHHHHhCCCCcEEEEEeCC
Q 044031 2 KKTIALYPGPAFHHMISMVELGKLILQHRSDVSITILVPS 41 (468)
Q Consensus 2 ~~~Iv~~~~~~~GHv~P~l~LA~~L~~~G~~h~Vt~~~~~ 41 (468)
++||++.-.|+-|-+. ...|.+.|.++| ++|.++.+.
T Consensus 4 ~k~IllgvTGaiaa~k-~~~ll~~L~~~g--~eV~vv~T~ 40 (209)
T 3zqu_A 4 PERITLAMTGASGAQY-GLRLLDCLVQEE--REVHFLISK 40 (209)
T ss_dssp CSEEEEEECSSSCHHH-HHHHHHHHHHTT--CEEEEEECH
T ss_pred CCEEEEEEECHHHHHH-HHHHHHHHHHCC--CEEEEEECc
Confidence 3589888889888877 999999999999 999999654
No 86
>3tqq_A Methionyl-tRNA formyltransferase; protein synthesis; 2.00A {Coxiella burnetii}
Probab=50.85 E-value=1.2e+02 Score=27.73 Aligned_cols=98 Identities=9% Similarity=-0.005 Sum_probs=0.0
Q ss_pred CcceEEEecCCCccCHHHHHHHHHHHHhCCCCcEEEEEeCCCCCC--------chhhhhhhhccccCCCCCeeEEEcCCC
Q 044031 1 MKKTIALYPGPAFHHMISMVELGKLILQHRSDVSITILVPSMPLE--------ESKTCSYINSISHRLNPIISFYYLPAI 72 (468)
Q Consensus 1 m~~~Iv~~~~~~~GHv~P~l~LA~~L~~~G~~h~Vt~~~~~~~~~--------~~~~~~~~~~~~~~~~~~i~~~~i~~~ 72 (468)
|+++|+|+-.|..+- ...+.|.++| |+|..+.+.+... ..-+....... +|.+......
T Consensus 1 ~~mrivf~Gtp~fa~-----~~L~~L~~~~--~~v~~Vvt~pd~~~grg~~l~~~~v~~~A~~~------gIpv~~~~~~ 67 (314)
T 3tqq_A 1 MSLKIVFAGTPQFAV-----PTLRALIDSS--HRVLAVYTQPDRPSGRGQKIMESPVKEIARQN------EIPIIQPFSL 67 (314)
T ss_dssp CCCEEEEEECSGGGH-----HHHHHHHHSS--SEEEEEECCCC----------CCHHHHHHHHT------TCCEECCSCS
T ss_pred CCcEEEEECCCHHHH-----HHHHHHHHCC--CeEEEEEeCCCCccccCCccCCCHHHHHHHHc------CCCEECcccC
Q ss_pred CCCCCCCChhHHHHHHHHHhhHHHHHHHHhhhcCCCccEEEe-----cCcHHHhhhCCCCeEEEecc
Q 044031 73 QMPSETLSRADIAIESIKLNSSNVFQALENISLTSKILSFII-----TSTTSFSYHPNIPTYTYFNS 134 (468)
Q Consensus 73 ~lp~~~~~~~~~~~~~~~~~~~~l~~ll~~~~~~~~pD~vI~-----~~~~~vA~~lgIP~i~~~~~ 134 (468)
..+.+.+.++++ +||++|+ .-...+-+.....++-++++
T Consensus 68 -------------------~~~~~~~~l~~~----~~Dliv~~~~~~ilp~~il~~~~~g~iNiHpS 111 (314)
T 3tqq_A 68 -------------------RDEVEQEKLIAM----NADVMVVVAYGLILPKKALNAFRLGCVNVHAS 111 (314)
T ss_dssp -------------------SSHHHHHHHHTT----CCSEEEEESCCSCCCHHHHTSSTTCEEEEESS
T ss_pred -------------------CCHHHHHHHHhc----CCCEEEEcCcccccCHHHHhhCcCCEEEecCc
No 87
>2h31_A Multifunctional protein ADE2; alpha-beta-alpha, ligase, lyase; 2.80A {Homo sapiens}
Probab=50.34 E-value=1.8e+02 Score=27.83 Aligned_cols=84 Identities=19% Similarity=0.169 Sum_probs=50.4
Q ss_pred CceEEeccCCCcCCCHHHHHHHHHHHHhCCCcEEEEEeCCCCccccCCChhHHhhccCCCeEecCCCCHHhhhCcc-Ccc
Q 044031 270 GSVVFLCFGSRGTFSAPQLKEIAIGLERSNQRFLWVVRNPSNAAEAELPEGFLERTKERGLVVKSWAPQSTILGHE-SVG 348 (468)
Q Consensus 270 ~~~v~vs~GS~~~~~~~~~~~~~~al~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~pq~~il~~~-~~~ 348 (468)
.+.|-|-+||.+ +.....+++..|+..|.++=.-+-+. +..|+... .++.+..- ... .|
T Consensus 265 ~~~V~Ii~gs~S--D~~~~~~a~~~l~~~gi~~~v~V~sa-----HR~p~~~~-----------~~~~~~~~-~g~~~v- 324 (425)
T 2h31_A 265 QCRVVVLMGSTS--DLGHCEKIKKACGNFGIPCELRVTSA-----HKGPDETL-----------RIKAEYEG-DGIPTV- 324 (425)
T ss_dssp CCEEEEEESCGG--GHHHHHHHHHHHHHTTCCEEEEECCT-----TTCHHHHH-----------HHHHHHHT-TCCCEE-
T ss_pred CCeEEEEecCcc--cHHHHHHHHHHHHHcCCceEEeeeec-----cCCHHHHH-----------HHHHHHHH-CCCCeE-
Confidence 347778888886 56777888999999998864444333 44555432 11111110 111 23
Q ss_pred eEEecCCcc----hHHHHHHhCCcEEecccc
Q 044031 349 GFVTHCGWS----SVVEAVTYGVPMIAWPLY 375 (468)
Q Consensus 349 ~~ithgG~~----s~~eal~~GvP~v~~P~~ 375 (468)
+|.=+|.. ++..++ .-+|+|++|..
T Consensus 325 -iIa~AG~~a~Lpgvva~~-t~~PVIgvP~~ 353 (425)
T 2h31_A 325 -FVAVAGRSNGLGPVMSGN-TAYPVISCPPL 353 (425)
T ss_dssp -EEEECCSSCCHHHHHHHH-CSSCEEECCCC
T ss_pred -EEEEcCcccchHhHHhcc-CCCCEEEeeCc
Confidence 77776654 444444 36899999984
No 88
>2ejb_A Probable aromatic acid decarboxylase; phenylacrylic acid decarboxylase, X-RAY diffraction, structural genomics, NPPSFA; 2.15A {Aquifex aeolicus}
Probab=49.73 E-value=28 Score=29.22 Aligned_cols=38 Identities=16% Similarity=0.141 Sum_probs=31.1
Q ss_pred cceEEEecCCCccCHHHHHHHHHHHHhCCCCcEEEEEeCCC
Q 044031 2 KKTIALYPGPAFHHMISMVELGKLILQHRSDVSITILVPSM 42 (468)
Q Consensus 2 ~~~Iv~~~~~~~GHv~P~l~LA~~L~~~G~~h~Vt~~~~~~ 42 (468)
|+||++.-.|+.|-+ =...+.++|.++| ++|.++.+..
T Consensus 1 mk~IllgvTGs~aa~-k~~~l~~~L~~~g--~~V~vv~T~~ 38 (189)
T 2ejb_A 1 MQKIALCITGASGVI-YGIKLLQVLEELD--FSVDLVISRN 38 (189)
T ss_dssp CCEEEEEECSSTTHH-HHHHHHHHHHHTT--CEEEEEECHH
T ss_pred CCEEEEEEECHHHHH-HHHHHHHHHHHCC--CEEEEEEChh
Confidence 157888888988854 6899999999999 9999996543
No 89
>2wqk_A 5'-nucleotidase SURE; SURE protein, putative acid phosphatase, structural genomics, 3-D structure, mixed alpha/beta protein, NPPSFA; 1.50A {Aquifex aeolicus}
Probab=49.02 E-value=26 Score=31.03 Aligned_cols=36 Identities=11% Similarity=0.088 Sum_probs=21.5
Q ss_pred ceEEEecCCCccCHHH-HHHHHHHHHhCCCCcEEEEEeCCCC
Q 044031 3 KTIALYPGPAFHHMIS-MVELGKLILQHRSDVSITILVPSMP 43 (468)
Q Consensus 3 ~~Iv~~~~~~~GHv~P-~l~LA~~L~~~G~~h~Vt~~~~~~~ 43 (468)
+||++. +- .|---| +.+|++.|.+.| + |+++.+...
T Consensus 2 p~ILlT-ND-DGi~apGi~~L~~~l~~~g--~-V~VvAP~~~ 38 (251)
T 2wqk_A 2 PTFLLV-ND-DGYFSPGINALREALKSLG--R-VVVVAPDRN 38 (251)
T ss_dssp CEEEEE-CS-SCTTCHHHHHHHHHHTTTS--E-EEEEEESSC
T ss_pred CEEEEE-cC-CCCCcHHHHHHHHHHHhCC--C-EEEEeeCCC
Confidence 566554 22 222233 557888888887 6 888865543
No 90
>3fwz_A Inner membrane protein YBAL; TRKA-N domain, E.coli, structural genomics, PSI-2, Pro structure initiative; HET: MSE AMP; 1.79A {Escherichia coli k-12}
Probab=48.34 E-value=11 Score=29.82 Aligned_cols=33 Identities=12% Similarity=0.147 Sum_probs=26.6
Q ss_pred CcceEEEecCCCccCHHHHHHHHHHHHhCCCCcEEEEEeC
Q 044031 1 MKKTIALYPGPAFHHMISMVELGKLILQHRSDVSITILVP 40 (468)
Q Consensus 1 m~~~Iv~~~~~~~GHv~P~l~LA~~L~~~G~~h~Vt~~~~ 40 (468)
|+.||+++-++..| ..+|+.|.++| |+|+++..
T Consensus 6 ~~~~viIiG~G~~G-----~~la~~L~~~g--~~v~vid~ 38 (140)
T 3fwz_A 6 ICNHALLVGYGRVG-----SLLGEKLLASD--IPLVVIET 38 (140)
T ss_dssp CCSCEEEECCSHHH-----HHHHHHHHHTT--CCEEEEES
T ss_pred CCCCEEEECcCHHH-----HHHHHHHHHCC--CCEEEEEC
Confidence 56789998776554 47899999999 99999944
No 91
>3i83_A 2-dehydropantoate 2-reductase; structural genomics, oxidoreductase, NADP, pantothenate BIOS PSI-2, protein structure initiative; 1.90A {Methylococcus capsulatus}
Probab=48.12 E-value=13 Score=34.13 Aligned_cols=33 Identities=15% Similarity=0.184 Sum_probs=26.8
Q ss_pred CcceEEEecCCCccCHHHHHHHHHHHHhCCCCcEEEEEeC
Q 044031 1 MKKTIALYPGPAFHHMISMVELGKLILQHRSDVSITILVP 40 (468)
Q Consensus 1 m~~~Iv~~~~~~~GHv~P~l~LA~~L~~~G~~h~Vt~~~~ 40 (468)
|+++|+++-.|+.|- .+|..|++.| |+|+++..
T Consensus 1 M~mkI~IiGaGaiG~-----~~a~~L~~~g--~~V~~~~r 33 (320)
T 3i83_A 1 MSLNILVIGTGAIGS-----FYGALLAKTG--HCVSVVSR 33 (320)
T ss_dssp --CEEEEESCCHHHH-----HHHHHHHHTT--CEEEEECS
T ss_pred CCCEEEEECcCHHHH-----HHHHHHHhCC--CeEEEEeC
Confidence 778999998888874 6788999999 99999954
No 92
>3hn2_A 2-dehydropantoate 2-reductase; PSI-2, NYSGXRC, structural GE protein structure initiative; 2.50A {Geobacter metallireducens}
Probab=47.68 E-value=14 Score=33.80 Aligned_cols=33 Identities=21% Similarity=0.253 Sum_probs=26.2
Q ss_pred CcceEEEecCCCccCHHHHHHHHHHHHhCCCCcEEEEEeC
Q 044031 1 MKKTIALYPGPAFHHMISMVELGKLILQHRSDVSITILVP 40 (468)
Q Consensus 1 m~~~Iv~~~~~~~GHv~P~l~LA~~L~~~G~~h~Vt~~~~ 40 (468)
|+++|+++-.|+.|- .+|..|++.| |+|+++..
T Consensus 1 M~mkI~IiGaGaiG~-----~~a~~L~~~g--~~V~~~~r 33 (312)
T 3hn2_A 1 MSLRIAIVGAGALGL-----YYGALLQRSG--EDVHFLLR 33 (312)
T ss_dssp ---CEEEECCSTTHH-----HHHHHHHHTS--CCEEEECS
T ss_pred CCCEEEEECcCHHHH-----HHHHHHHHCC--CeEEEEEc
Confidence 778899999999885 5789999999 99999954
No 93
>1yt5_A Inorganic polyphosphate/ATP-NAD kinase; domain 1: alpha/beta domain2: beta sandwich, structural genomics, PSI, protein structure initiative; 2.30A {Thermotoga maritima}
Probab=47.37 E-value=14 Score=32.78 Aligned_cols=28 Identities=25% Similarity=0.362 Sum_probs=24.2
Q ss_pred cceEEecCCcchHHHHHHh---CCcEEeccc
Q 044031 347 VGGFVTHCGWSSVVEAVTY---GVPMIAWPL 374 (468)
Q Consensus 347 ~~~~ithgG~~s~~eal~~---GvP~v~~P~ 374 (468)
.+++|+=||=||+.+++.. ++|+++++.
T Consensus 42 ~D~vv~~GGDGTll~~a~~~~~~~PilGIn~ 72 (258)
T 1yt5_A 42 ADLIVVVGGDGTVLKAAKKAADGTPMVGFKA 72 (258)
T ss_dssp CSEEEEEECHHHHHHHHTTBCTTCEEEEEES
T ss_pred CCEEEEEeCcHHHHHHHHHhCCCCCEEEEEC
Confidence 3459999999999999887 889999874
No 94
>1id1_A Putative potassium channel protein; RCK domain, E.coli potassium channel, BK channel, rossmann fold, membrane protein; 2.40A {Escherichia coli} SCOP: c.2.1.9
Probab=46.86 E-value=12 Score=29.94 Aligned_cols=32 Identities=9% Similarity=0.076 Sum_probs=24.9
Q ss_pred cceEEEecCCCccCHHHHHHHHHHHHhCCCCcEEEEEeC
Q 044031 2 KKTIALYPGPAFHHMISMVELGKLILQHRSDVSITILVP 40 (468)
Q Consensus 2 ~~~Iv~~~~~~~GHv~P~l~LA~~L~~~G~~h~Vt~~~~ 40 (468)
+.||+++-+ |++- ..+++.|.++| |+|+++..
T Consensus 3 ~~~vlI~G~---G~vG--~~la~~L~~~g--~~V~vid~ 34 (153)
T 1id1_A 3 KDHFIVCGH---SILA--INTILQLNQRG--QNVTVISN 34 (153)
T ss_dssp CSCEEEECC---SHHH--HHHHHHHHHTT--CCEEEEEC
T ss_pred CCcEEEECC---CHHH--HHHHHHHHHCC--CCEEEEEC
Confidence 468888843 5443 78899999999 99999954
No 95
>3osu_A 3-oxoacyl-[acyl-carrier-protein] reductase; structural genomics, csgid, center for structural genomics O infectious diseases; 1.90A {Staphylococcus aureus subsp} SCOP: c.2.1.0 PDB: 3sj7_A*
Probab=46.52 E-value=67 Score=27.75 Aligned_cols=34 Identities=9% Similarity=0.040 Sum_probs=26.1
Q ss_pred cceEEEecCCCccCHHHHHHHHHHHHhCCCCcEEEEEeC
Q 044031 2 KKTIALYPGPAFHHMISMVELGKLILQHRSDVSITILVP 40 (468)
Q Consensus 2 ~~~Iv~~~~~~~GHv~P~l~LA~~L~~~G~~h~Vt~~~~ 40 (468)
+.++++++.++.| =..++|++|+++| ++|.++..
T Consensus 3 ~~k~~lVTGas~g---IG~~ia~~l~~~G--~~V~~~~~ 36 (246)
T 3osu_A 3 MTKSALVTGASRG---IGRSIALQLAEEG--YNVAVNYA 36 (246)
T ss_dssp CSCEEEETTCSSH---HHHHHHHHHHHTT--CEEEEEES
T ss_pred CCCEEEEECCCCh---HHHHHHHHHHHCC--CEEEEEeC
Confidence 3468888866653 4678999999999 99988743
No 96
>3u7q_B Nitrogenase molybdenum-iron protein beta chain; multiple rossmann fold domains, reductase, nitrogen fixing, oxidoreductase; HET: HCA ICS 1CL CLF; 1.00A {Azotobacter vinelandii} SCOP: c.92.2.3 PDB: 1fp4_B* 1g21_B* 1g20_B* 1m1n_B* 1l5h_B* 1m1y_B* 1m34_B* 1n2c_B* 2afh_B* 2afi_B* 2afk_B* 2min_B* 3k1a_B* 3min_B*
Probab=45.07 E-value=98 Score=30.62 Aligned_cols=33 Identities=9% Similarity=-0.071 Sum_probs=25.4
Q ss_pred HHHHHHHhhhcCCCccEEEe-cCcHHHhhhC-------CCCeEEE
Q 044031 95 NVFQALENISLTSKILSFII-TSTTSFSYHP-------NIPTYTY 131 (468)
Q Consensus 95 ~l~~ll~~~~~~~~pD~vI~-~~~~~vA~~l-------gIP~i~~ 131 (468)
.+++.+++. +||++|. .+...+|+++ |||++..
T Consensus 429 ~l~~~i~~~----~pDLlig~s~~k~~a~~~~~~~~~~giP~iri 469 (523)
T 3u7q_B 429 HLRSLVFTD----KPDFMIGNSYGKFIQRDTLHKGKEFEVPLIRI 469 (523)
T ss_dssp HHHHHHHHT----CCSEEEECTTHHHHHHHHHHHCGGGCCCEEEC
T ss_pred HHHHHHHhc----CCCEEEECccHHHHHHHhhcccccCCCceEEe
Confidence 445666666 9999999 7777778777 9998854
No 97
>2lnd_A De novo designed protein, PFK fold; structural genomics, northeast structural genomics consortiu PSI-biology, protein structure initiative; NMR {Artificial gene}
Probab=44.60 E-value=27 Score=24.28 Aligned_cols=49 Identities=20% Similarity=0.230 Sum_probs=30.2
Q ss_pred hCCcEEecccccchhhHHHHHHhhc--ceeeeeccCCcccccCCCCccccHHHHHHHHHHHhc
Q 044031 365 YGVPMIAWPLYAEQFLNSVALVQEM--KVAMPMFLNGEEETIGNGEGVVSAERVEERVRELMM 425 (468)
Q Consensus 365 ~GvP~v~~P~~~DQ~~na~~~~~~~--g~g~~~~~~~~~~~~~~~~~~~~~~~l~~av~~~l~ 425 (468)
.|+|+++.--.+.|.+....--++. |+...+-. . -.++++.+.|++.|.
T Consensus 50 ngkplvvfvngasqndvnefqneakkegvsydvlk---------s---tdpeeltqrvreflk 100 (112)
T 2lnd_A 50 NGKPLVVFVNGASQNDVNEFQNEAKKEGVSYDVLK---------S---TDPEELTQRVREFLK 100 (112)
T ss_dssp CCSCEEEEECSCCHHHHHHHHHHHHHHTCEEEEEE---------C---CCHHHHHHHHHHHHH
T ss_pred cCCeEEEEecCcccccHHHHHHHHHhcCcchhhhc---------c---CCHHHHHHHHHHHHH
Confidence 6788887776666654222111122 66655543 3 578899999998874
No 98
>1jx7_A Hypothetical protein YCHN; NEW fold, hexamer, structural genomics, BSGC structure funded by NIH, protein structure initiative, PSI; 2.80A {Escherichia coli} SCOP: c.114.1.1
Probab=44.10 E-value=27 Score=26.20 Aligned_cols=39 Identities=13% Similarity=0.271 Sum_probs=27.3
Q ss_pred CcceEEEecCC--CccCHHHHHHHHHHHHhC-CCCc-EEEEEeCC
Q 044031 1 MKKTIALYPGP--AFHHMISMVELGKLILQH-RSDV-SITILVPS 41 (468)
Q Consensus 1 m~~~Iv~~~~~--~~GHv~P~l~LA~~L~~~-G~~h-~Vt~~~~~ 41 (468)
||.-+.++..+ ........+.+|..+++. | | +|+++-..
T Consensus 1 M~k~~ii~~~~p~~~~~~~~al~~a~~~~~~~g--~~~v~vff~~ 43 (117)
T 1jx7_A 1 MQKIVIVANGAPYGSESLFNSLRLAIALREQES--NLDLRLFLMS 43 (117)
T ss_dssp CCEEEEEECCCTTTCSHHHHHHHHHHHHHHHCT--TCEEEEEECG
T ss_pred CcEEEEEEcCCCCCcHHHHHHHHHHHHHHhcCC--CccEEEEEEc
Confidence 64334444444 345677889999999999 9 9 99888443
No 99
>2yxb_A Coenzyme B12-dependent mutase; alpha/beta, structural genomics, NPPSFA, national project on structural and functional analyses; 1.80A {Aeropyrum pernix}
Probab=43.91 E-value=20 Score=29.26 Aligned_cols=39 Identities=3% Similarity=-0.154 Sum_probs=34.7
Q ss_pred ceEEEecCCCccCHHHHHHHHHHHHhCCCCcEEEEEeCCCC
Q 044031 3 KTIALYPGPAFHHMISMVELGKLILQHRSDVSITILVPSMP 43 (468)
Q Consensus 3 ~~Iv~~~~~~~GHv~P~l~LA~~L~~~G~~h~Vt~~~~~~~ 43 (468)
++|++.+.+..+|-....-++..|..+| ++|.......+
T Consensus 19 ~~vlla~~~gd~HdiG~~~va~~l~~~G--~eVi~lG~~~p 57 (161)
T 2yxb_A 19 YKVLVAKMGLDGHDRGAKVVARALRDAG--FEVVYTGLRQT 57 (161)
T ss_dssp CEEEEEEESSSSCCHHHHHHHHHHHHTT--CEEECCCSBCC
T ss_pred CEEEEEeCCCCccHHHHHHHHHHHHHCC--CEEEECCCCCC
Confidence 6899999999999999999999999999 99998865443
No 100
>3s2u_A UDP-N-acetylglucosamine--N-acetylmuramyl-(pentape pyrophosphoryl-undecaprenol N-acetylglucosamine...; N-acetylglucosaminyl transferase; HET: UD1; 2.23A {Pseudomonas aeruginosa}
Probab=43.74 E-value=27 Score=32.67 Aligned_cols=36 Identities=14% Similarity=0.187 Sum_probs=25.1
Q ss_pred eEEeccCCCcCCCHHHHHHHHHHHHhCCCcEEEEEeCC
Q 044031 272 VVFLCFGSRGTFSAPQLKEIAIGLERSNQRFLWVVRNP 309 (468)
Q Consensus 272 ~v~vs~GS~~~~~~~~~~~~~~al~~~~~~~l~~~~~~ 309 (468)
+++.+.||-+...+ ...++++|++.|..++|+....
T Consensus 5 i~i~~GGTgGHi~p--alala~~L~~~g~~V~~vg~~~ 40 (365)
T 3s2u_A 5 VLIMAGGTGGHVFP--ALACAREFQARGYAVHWLGTPR 40 (365)
T ss_dssp EEEECCSSHHHHHH--HHHHHHHHHHTTCEEEEEECSS
T ss_pred EEEEcCCCHHHHHH--HHHHHHHHHhCCCEEEEEECCc
Confidence 77777777553322 2458889998999999987543
No 101
>2r85_A PURP protein PF1517; ATP-grAsp superfamily, unknown function; HET: AMP; 1.70A {Pyrococcus furiosus} SCOP: c.30.1.8 d.142.1.9 PDB: 2r84_A* 2r86_A* 2r87_A*
Probab=42.97 E-value=18 Score=33.10 Aligned_cols=32 Identities=22% Similarity=0.159 Sum_probs=27.0
Q ss_pred CcceEEEecCCCccCHHHHHHHHHHHHhCCCCcEEEEEeC
Q 044031 1 MKKTIALYPGPAFHHMISMVELGKLILQHRSDVSITILVP 40 (468)
Q Consensus 1 m~~~Iv~~~~~~~GHv~P~l~LA~~L~~~G~~h~Vt~~~~ 40 (468)
|+++|+++..+ ....+++.+.++| |+|.++..
T Consensus 1 m~m~Ililg~g------~~~~l~~a~~~~G--~~v~~~~~ 32 (334)
T 2r85_A 1 MKVRIATYASH------SALQILKGAKDEG--FETIAFGS 32 (334)
T ss_dssp CCSEEEEESST------THHHHHHHHHHTT--CCEEEESC
T ss_pred CceEEEEECCh------hHHHHHHHHHhCC--CEEEEEEC
Confidence 88889998876 5678999999999 99998843
No 102
>3tov_A Glycosyl transferase family 9; structural genomics, PSI-BIOL protein structure initiative, midwest center for structural genomics, MCSG; 2.98A {Veillonella parvula}
Probab=42.95 E-value=1.4e+02 Score=27.54 Aligned_cols=97 Identities=7% Similarity=0.085 Sum_probs=53.3
Q ss_pred eEEEecCCCcc----CHHHHHHHHHHHHhCCCCcEEEEEeCCCCCCchhhhhhhhccccCCCCCeeEEEcCCCCCCCCCC
Q 044031 4 TIALYPGPAFH----HMISMVELGKLILQHRSDVSITILVPSMPLEESKTCSYINSISHRLNPIISFYYLPAIQMPSETL 79 (468)
Q Consensus 4 ~Iv~~~~~~~G----Hv~P~l~LA~~L~~~G~~h~Vt~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~i~~~~lp~~~~ 79 (468)
-|++.|..+.. -..-+.+|++.|.++| ++|.++. .+.+.....+..... . .. ...+. +..
T Consensus 187 ~i~i~pga~~~~k~wp~~~~~~l~~~l~~~g--~~vvl~g--~~~e~~~~~~i~~~~---~-~~--~~~l~------g~~ 250 (349)
T 3tov_A 187 LIGFNIGSAVPEKRWPAERFAHVADYFGRLG--YKTVFFG--GPMDLEMVQPVVEQM---E-TK--PIVAT------GKF 250 (349)
T ss_dssp EEEEECCCSSGGGCCCHHHHHHHHHHHHHHT--CEEEECC--CTTTHHHHHHHHHTC---S-SC--CEECT------TCC
T ss_pred EEEEeCCCCCccCCCCHHHHHHHHHHHHhCC--CeEEEEe--CcchHHHHHHHHHhc---c-cc--cEEee------CCC
Confidence 46666655432 1445899999999888 9887753 233322221221111 0 00 01110 001
Q ss_pred ChhHHHHHHHHHhhHHHHHHHHhhhcCCCccEEEe--cCcHHHhhhCCCCeEEEecc
Q 044031 80 SRADIAIESIKLNSSNVFQALENISLTSKILSFII--TSTTSFSYHPNIPTYTYFNS 134 (468)
Q Consensus 80 ~~~~~~~~~~~~~~~~l~~ll~~~~~~~~pD~vI~--~~~~~vA~~lgIP~i~~~~~ 134 (468)
...++..+++ +.|++|+ +...-+|..+|+|.+.++..
T Consensus 251 ------------sl~e~~ali~------~a~~~i~~DsG~~HlAaa~g~P~v~lfg~ 289 (349)
T 3tov_A 251 ------------QLGPLAAAMN------RCNLLITNDSGPMHVGISQGVPIVALYGP 289 (349)
T ss_dssp ------------CHHHHHHHHH------TCSEEEEESSHHHHHHHTTTCCEEEECSS
T ss_pred ------------CHHHHHHHHH------hCCEEEECCCCHHHHHHhcCCCEEEEECC
Confidence 1122333444 7799999 55555899999999987653
No 103
>2i2x_B MTAC, methyltransferase 1; TIM barrel and helix bundle (MTAB), rossman fold and helix B (MTAC); HET: B13; 2.50A {Methanosarcina barkeri}
Probab=42.05 E-value=28 Score=30.87 Aligned_cols=41 Identities=17% Similarity=0.084 Sum_probs=36.5
Q ss_pred ceEEEecCCCccCHHHHHHHHHHHHhCCCCcEEEEEeCCCCCC
Q 044031 3 KTIALYPGPAFHHMISMVELGKLILQHRSDVSITILVPSMPLE 45 (468)
Q Consensus 3 ~~Iv~~~~~~~GHv~P~l~LA~~L~~~G~~h~Vt~~~~~~~~~ 45 (468)
++|++.+.+...|-....-++..|..+| ++|..+....+.+
T Consensus 124 ~~vlla~~~gd~HdiG~~iva~~L~~~G--~~Vi~LG~~vp~e 164 (258)
T 2i2x_B 124 GTVVCHVAEGDVHDIGKNIVTALLRANG--YNVVDLGRDVPAE 164 (258)
T ss_dssp CEEEEEECTTCCCCHHHHHHHHHHHHTT--CEEEEEEEECCSH
T ss_pred CeEEEEeCCCCccHHHHHHHHHHHHHCC--CEEEECCCCCCHH
Confidence 5899999999999999999999999999 9999997655443
No 104
>3pdi_B Nitrogenase MOFE cofactor biosynthesis protein NI; nitrogenase cofactor maturation, NIFB, nifdk, NIFH; HET: CZL; 2.40A {Azotobacter vinelandii}
Probab=41.71 E-value=22 Score=34.64 Aligned_cols=32 Identities=9% Similarity=-0.035 Sum_probs=27.3
Q ss_pred HHHHHHhhhcCCCccEEEe-cCcHHHhhhCCCCeEEE
Q 044031 96 VFQALENISLTSKILSFII-TSTTSFSYHPNIPTYTY 131 (468)
Q Consensus 96 l~~ll~~~~~~~~pD~vI~-~~~~~vA~~lgIP~i~~ 131 (468)
+++++++. +||++|. .....+|+++|||++.+
T Consensus 367 le~~i~~~----~pDllig~~~~~~~a~k~gip~~~~ 399 (458)
T 3pdi_B 367 LEHAARAG----QAQLVIGNSHALASARRLGVPLLRA 399 (458)
T ss_dssp HHHHHHHH----TCSEEEECTTHHHHHHHTTCCEEEC
T ss_pred HHHHHHhc----CCCEEEEChhHHHHHHHcCCCEEEe
Confidence 56677777 9999999 88888999999998864
No 105
>3vot_A L-amino acid ligase, BL00235; ATP-grAsp motif, ATP-binding; HET: ADP PG4; 1.80A {Bacillus licheniformis}
Probab=41.36 E-value=1.1e+02 Score=29.09 Aligned_cols=33 Identities=15% Similarity=0.027 Sum_probs=21.3
Q ss_pred ceEEEecCCCccCHHHHHHHHHHHHhCCCCcEEEEEeCCC
Q 044031 3 KTIALYPGPAFHHMISMVELGKLILQHRSDVSITILVPSM 42 (468)
Q Consensus 3 ~~Iv~~~~~~~GHv~P~l~LA~~L~~~G~~h~Vt~~~~~~ 42 (468)
+||+++..+ +.+ .. +.+..++.| ++|+++....
T Consensus 6 k~l~Il~~~-~~~-~~---i~~aa~~lG--~~vv~v~~~~ 38 (425)
T 3vot_A 6 KNLAIICQN-KHL-PF---IFEEAERLG--LKVTFFYNSA 38 (425)
T ss_dssp CEEEEECCC-TTC-CH---HHHHHHHTT--CEEEEEEETT
T ss_pred cEEEEECCC-hhH-HH---HHHHHHHCC--CEEEEEECCC
Confidence 578887644 332 22 456667779 9999986544
No 106
>2ywx_A Phosphoribosylaminoimidazole carboxylase catalyti; rossmann fold, structural genomics, NPPSFA; 2.31A {Methanocaldococcus jannaschii}
Probab=41.23 E-value=1.4e+02 Score=24.05 Aligned_cols=139 Identities=17% Similarity=0.164 Sum_probs=74.1
Q ss_pred EEeccCCCcCCCHHHHHHHHHHHHhCCCcEEEEEeCCCCccccCCChhHHhhccCCCeEecCCCCHHhhhCccCcceEEe
Q 044031 273 VFLCFGSRGTFSAPQLKEIAIGLERSNQRFLWVVRNPSNAAEAELPEGFLERTKERGLVVKSWAPQSTILGHESVGGFVT 352 (468)
Q Consensus 273 v~vs~GS~~~~~~~~~~~~~~al~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~pq~~il~~~~~~~~it 352 (468)
|-|-+||.+ +.+..++....|+..|.++=.-+-+. +..|+.+.+-.. +. ...+ ||.
T Consensus 2 V~Iimgs~S--D~~v~~~a~~~l~~~gi~~dv~V~sa-----HR~p~~~~~~~~-----------~a----~~~V--iIa 57 (157)
T 2ywx_A 2 ICIIMGSES--DLKIAEKAVNILKEFGVEFEVRVASA-----HRTPELVEEIVK-----------NS----KADV--FIA 57 (157)
T ss_dssp EEEEESSGG--GHHHHHHHHHHHHHTTCCEEEEECCT-----TTCHHHHHHHHH-----------HC----CCSE--EEE
T ss_pred EEEEEccHH--HHHHHHHHHHHHHHcCCCeEEEEEcc-----cCCHHHHHHHHH-----------hc----CCCE--EEE
Confidence 445567775 56777888899999888854444332 445554332110 00 1133 777
Q ss_pred cCCcchHHHHHHh---CCcEEecccccc-hhhHHHHHHhhc--ceeeeeccCCcccccCCCCccccHHHHHHHHHHHhcC
Q 044031 353 HCGWSSVVEAVTY---GVPMIAWPLYAE-QFLNSVALVQEM--KVAMPMFLNGEEETIGNGEGVVSAERVEERVRELMMG 426 (468)
Q Consensus 353 hgG~~s~~eal~~---GvP~v~~P~~~D-Q~~na~~~~~~~--g~g~~~~~~~~~~~~~~~~~~~~~~~l~~av~~~l~~ 426 (468)
=+|...-+-++.+ -+|+|++|.... .-..+-.-.-++ |+.+..-. =++-.++.-+...|. -+.|
T Consensus 58 ~AG~aa~Lpgvva~~t~~PVIgVP~~~~l~G~daLlS~vqmP~gvpVatV~---------I~~~~nAa~lA~~Il-~~~d 127 (157)
T 2ywx_A 58 IAGLAAHLPGVVASLTTKPVIAVPVDAKLDGLDALLSSVQMPPGIPVATVG---------IDRGENAAILALEIL-ALKD 127 (157)
T ss_dssp EEESSCCHHHHHHTTCSSCEEEEEECSSGGGHHHHHHHHSCCTTSCCEECC---------TTCHHHHHHHHHHHH-TTTC
T ss_pred EcCchhhhHHHHHhccCCCEEEecCCCccCcHHHHHHHhcCCCCCeeEEEe---------cCCcHHHHHHHHHHH-hcCC
Confidence 7665544444433 489999998321 222222111121 43332211 012256666665554 3356
Q ss_pred chhHHHHHHHHHHHHHHHHhhc
Q 044031 427 SEGKALRERSLEMRMMAATAWN 448 (468)
Q Consensus 427 ~~~~~~~~~a~~l~~~~~~a~~ 448 (468)
+ +++++.+.++...++.+.
T Consensus 128 ~---~l~~kl~~~r~~~~~~v~ 146 (157)
T 2ywx_A 128 E---NIAKKLIEYREKMKKKVY 146 (157)
T ss_dssp H---HHHHHHHHHHHHHHHHHH
T ss_pred H---HHHHHHHHHHHHHHHHHH
Confidence 7 677777777777766554
No 107
>1y80_A Predicted cobalamin binding protein; corrinoid, factor IIIM, methyl transferase, structural genomics, PSI, protein structure initiative; HET: B1M; 1.70A {Moorella thermoacetica}
Probab=41.10 E-value=29 Score=29.53 Aligned_cols=39 Identities=13% Similarity=-0.021 Sum_probs=34.9
Q ss_pred ceEEEecCCCccCHHHHHHHHHHHHhCCCCcEEEEEeCCCC
Q 044031 3 KTIALYPGPAFHHMISMVELGKLILQHRSDVSITILVPSMP 43 (468)
Q Consensus 3 ~~Iv~~~~~~~GHv~P~l~LA~~L~~~G~~h~Vt~~~~~~~ 43 (468)
++|++.+.++..|-....-++..|..+| ++|..+....+
T Consensus 89 ~~vll~~~~gd~H~iG~~~va~~l~~~G--~~v~~LG~~vp 127 (210)
T 1y80_A 89 GKIVLGTVKGDLHDIGKNLVAMMLESGG--FTVYNLGVDIE 127 (210)
T ss_dssp CEEEEEEBTTCCCCHHHHHHHHHHHHTT--CEEEECCSSBC
T ss_pred CEEEEEeCCCcccHHHHHHHHHHHHHCC--CEEEECCCCCC
Confidence 4799999999999999999999999999 99999865433
No 108
>3ius_A Uncharacterized conserved protein; APC63810, silicibacter pomeroyi DSS, structural genomics, PSI-2, protein structure initiative; HET: MSE; 1.66A {Ruegeria pomeroyi dss-3}
Probab=41.00 E-value=23 Score=31.56 Aligned_cols=33 Identities=12% Similarity=-0.001 Sum_probs=24.7
Q ss_pred CcceEEEecCCCccCHHHHHHHHHHHHhCCCCcEEEEEeC
Q 044031 1 MKKTIALYPGPAFHHMISMVELGKLILQHRSDVSITILVP 40 (468)
Q Consensus 1 m~~~Iv~~~~~~~GHv~P~l~LA~~L~~~G~~h~Vt~~~~ 40 (468)
|+++|++. |+ |.+ .-.|+++|.++| |+|+.++-
T Consensus 4 m~~~ilVt--Ga-G~i--G~~l~~~L~~~g--~~V~~~~r 36 (286)
T 3ius_A 4 MTGTLLSF--GH-GYT--ARVLSRALAPQG--WRIIGTSR 36 (286)
T ss_dssp -CCEEEEE--TC-CHH--HHHHHHHHGGGT--CEEEEEES
T ss_pred CcCcEEEE--CC-cHH--HHHHHHHHHHCC--CEEEEEEc
Confidence 66777666 36 765 457899999999 99999854
No 109
>4gbj_A 6-phosphogluconate dehydrogenase NAD-binding; structural genomics, PSI-biology, midwest center for structu genomics, MCSG; 2.05A {Dyadobacter fermentans}
Probab=40.74 E-value=23 Score=32.23 Aligned_cols=32 Identities=13% Similarity=0.232 Sum_probs=27.9
Q ss_pred CcceEEEecCCCccCHHHHHHHHHHHHhCCCCcEEEEEe
Q 044031 1 MKKTIALYPGPAFHHMISMVELGKLILQHRSDVSITILV 39 (468)
Q Consensus 1 m~~~Iv~~~~~~~GHv~P~l~LA~~L~~~G~~h~Vt~~~ 39 (468)
|+.+|.|+-.|..|. .+|+.|+++| |+|+++.
T Consensus 4 Ms~kIgfIGLG~MG~-----~mA~~L~~~G--~~V~v~d 35 (297)
T 4gbj_A 4 MSEKIAFLGLGNLGT-----PIAEILLEAG--YELVVWN 35 (297)
T ss_dssp CCCEEEEECCSTTHH-----HHHHHHHHTT--CEEEEC-
T ss_pred CCCcEEEEecHHHHH-----HHHHHHHHCC--CeEEEEe
Confidence 777899999998885 6899999999 9999873
No 110
>3ego_A Probable 2-dehydropantoate 2-reductase; structural genomics, PANE, unknown function, cytoplasm, NADP, oxidoreductase; 1.90A {Bacillus subtilis}
Probab=40.61 E-value=16 Score=33.38 Aligned_cols=31 Identities=13% Similarity=0.114 Sum_probs=26.2
Q ss_pred CcceEEEecCCCccCHHHHHHHHHHHHhCCCCcEEEEEe
Q 044031 1 MKKTIALYPGPAFHHMISMVELGKLILQHRSDVSITILV 39 (468)
Q Consensus 1 m~~~Iv~~~~~~~GHv~P~l~LA~~L~~~G~~h~Vt~~~ 39 (468)
|+++|+++-.|+.|- .+|..|+ +| |+|+++.
T Consensus 1 M~mkI~IiGaGa~G~-----~~a~~L~-~g--~~V~~~~ 31 (307)
T 3ego_A 1 MSLKIGIIGGGSVGL-----LCAYYLS-LY--HDVTVVT 31 (307)
T ss_dssp -CCEEEEECCSHHHH-----HHHHHHH-TT--SEEEEEC
T ss_pred CCCEEEEECCCHHHH-----HHHHHHh-cC--CceEEEE
Confidence 888999998888885 6788899 99 9999994
No 111
>2iz6_A Molybdenum cofactor carrier protein; metal transport; 1.60A {Chlamydomonas reinhardtii} PDB: 2iz5_A 2iz7_A
Probab=39.96 E-value=62 Score=26.75 Aligned_cols=45 Identities=13% Similarity=0.075 Sum_probs=29.6
Q ss_pred EecCCCC-HHhhhCccCcceEEecCCcchHHHH---HHhCCcEEecccc
Q 044031 331 VVKSWAP-QSTILGHESVGGFVTHCGWSSVVEA---VTYGVPMIAWPLY 375 (468)
Q Consensus 331 ~v~~~~p-q~~il~~~~~~~~ithgG~~s~~ea---l~~GvP~v~~P~~ 375 (468)
++.++.+ ...++..-+..+++--||.||+.|+ +..++|++.+|.+
T Consensus 92 i~~~~~~~Rk~~m~~~sda~IvlpGg~GTL~E~~~al~~~kpV~~l~~~ 140 (176)
T 2iz6_A 92 IVTGLGSARDNINALSSNVLVAVGMGPGTAAEVALALKAKKPVVLLGTQ 140 (176)
T ss_dssp EECCCCSSSCCCCGGGCSEEEEESCCHHHHHHHHHHHHTTCCEEEESCC
T ss_pred EEcCCHHHHHHHHHHhCCEEEEecCCccHHHHHHHHHHhCCcEEEEcCc
Confidence 3445555 2334443444467778899986655 6799999999983
No 112
>1sbz_A Probable aromatic acid decarboxylase; FMN binding, PAD1, UBIX, montreal-kingston bacterial structu genomics initiative, BSGI; HET: FMN; 2.00A {Escherichia coli} SCOP: c.34.1.1
Probab=39.80 E-value=37 Score=28.70 Aligned_cols=35 Identities=11% Similarity=0.037 Sum_probs=29.6
Q ss_pred eEEEecCCCccCHHHHHHHHHHHHhC-CCCcEEEEEeCC
Q 044031 4 TIALYPGPAFHHMISMVELGKLILQH-RSDVSITILVPS 41 (468)
Q Consensus 4 ~Iv~~~~~~~GHv~P~l~LA~~L~~~-G~~h~Vt~~~~~ 41 (468)
||++.-.|+.|-+. ...|.+.|+++ | ++|.++.+.
T Consensus 2 ~IllgvTGsiaa~k-~~~ll~~L~~~~g--~~V~vv~T~ 37 (197)
T 1sbz_A 2 KLIVGMTGATGAPL-GVALLQALREMPN--VETHLVMSK 37 (197)
T ss_dssp EEEEEECSSSCHHH-HHHHHHHHHTCTT--CEEEEEECH
T ss_pred EEEEEEeChHHHHH-HHHHHHHHHhccC--CEEEEEECc
Confidence 58888888877765 99999999999 9 999999654
No 113
>1ooe_A Dihydropteridine reductase; structural genomics, PSI, protein structure initiative, southeast collaboratory for structural genomics; HET: MES; 1.65A {Caenorhabditis elegans} SCOP: c.2.1.2
Probab=39.14 E-value=44 Score=28.71 Aligned_cols=35 Identities=6% Similarity=-0.081 Sum_probs=26.8
Q ss_pred CcceEEEecCCCccCHHHHHHHHHHHHhCCCCcEEEEEeC
Q 044031 1 MKKTIALYPGPAFHHMISMVELGKLILQHRSDVSITILVP 40 (468)
Q Consensus 1 m~~~Iv~~~~~~~GHv~P~l~LA~~L~~~G~~h~Vt~~~~ 40 (468)
|+.++++++.++.| =..++|++|+++| ++|+++.-
T Consensus 1 m~~k~vlITGas~g---IG~~~a~~l~~~G--~~V~~~~r 35 (236)
T 1ooe_A 1 MSSGKVIVYGGKGA---LGSAILEFFKKNG--YTVLNIDL 35 (236)
T ss_dssp -CCEEEEEETTTSH---HHHHHHHHHHHTT--EEEEEEES
T ss_pred CCCCEEEEECCCcH---HHHHHHHHHHHCC--CEEEEEec
Confidence 66678888866553 4678999999999 99988853
No 114
>1efp_B ETF, protein (electron transfer flavoprotein); electron transport, glutaric acidemia type II; HET: FAD AMP; 2.60A {Paracoccus denitrificans} SCOP: c.26.2.3
Probab=39.11 E-value=1.2e+02 Score=26.54 Aligned_cols=35 Identities=6% Similarity=-0.099 Sum_probs=25.8
Q ss_pred HHHHHHHhhhcCCCccEEEe---c-------CcHHHhhhCCCCeEEEec
Q 044031 95 NVFQALENISLTSKILSFII---T-------STTSFSYHPNIPTYTYFN 133 (468)
Q Consensus 95 ~l~~ll~~~~~~~~pD~vI~---~-------~~~~vA~~lgIP~i~~~~ 133 (468)
.+..++++. +||+|++ . .+..+|++||+|.+....
T Consensus 104 ~La~~i~~~----~~dlVl~G~~s~d~~~~~v~p~lA~~L~~~~vt~v~ 148 (252)
T 1efp_B 104 ILAAVARAE----GTELIIAGKQAIDNDMNATGQMLAAILGWAQATFAS 148 (252)
T ss_dssp HHHHHHHHH----TCSEEEEESCCTTTCCCCHHHHHHHHHTCEEEEEEE
T ss_pred HHHHHHHhc----CCCEEEEcCCccCCchhhHHHHHHHHhCCCccccEE
Confidence 344455554 8999999 2 356699999999998754
No 115
>3l6e_A Oxidoreductase, short-chain dehydrogenase/reducta; structural genomics, PSI-2, protein structure initiative; 2.30A {Aeromonas hydrophila subsp} SCOP: c.2.1.0
Probab=39.05 E-value=31 Score=29.79 Aligned_cols=34 Identities=9% Similarity=0.029 Sum_probs=26.2
Q ss_pred CcceEEEecCCCccCHHHHHHHHHHHHhCCCCcEEEEEe
Q 044031 1 MKKTIALYPGPAFHHMISMVELGKLILQHRSDVSITILV 39 (468)
Q Consensus 1 m~~~Iv~~~~~~~GHv~P~l~LA~~L~~~G~~h~Vt~~~ 39 (468)
|++++++++.++.| =..++|++|+++| ++|.++.
T Consensus 1 Ms~k~vlVTGas~G---IG~a~a~~l~~~G--~~V~~~~ 34 (235)
T 3l6e_A 1 MSLGHIIVTGAGSG---LGRALTIGLVERG--HQVSMMG 34 (235)
T ss_dssp --CCEEEEESTTSH---HHHHHHHHHHHTT--CEEEEEE
T ss_pred CCCCEEEEECCCCH---HHHHHHHHHHHCC--CEEEEEE
Confidence 66678888877654 4678999999999 9998874
No 116
>1xmp_A PURE, phosphoribosylaminoimidazole carboxylase; purine biosynthesis, spine, lyase; 1.80A {Bacillus anthracis} SCOP: c.23.8.1
Probab=38.99 E-value=71 Score=26.12 Aligned_cols=37 Identities=8% Similarity=0.023 Sum_probs=30.8
Q ss_pred CcceEEEecCCCccCHHHHHHHHHHHHhCCCCcEEEEE
Q 044031 1 MKKTIALYPGPAFHHMISMVELGKLILQHRSDVSITIL 38 (468)
Q Consensus 1 m~~~Iv~~~~~~~GHv~P~l~LA~~L~~~G~~h~Vt~~ 38 (468)
||+.|+++. ++.+|+.-+-..++.|.+-|=.++|.++
T Consensus 10 ~~~~V~Iim-GS~SD~~v~~~a~~~L~~~Gi~~dv~V~ 46 (170)
T 1xmp_A 10 MKSLVGVIM-GSTSDWETMKYACDILDELNIPYEKKVV 46 (170)
T ss_dssp -CCSEEEEE-SSGGGHHHHHHHHHHHHHTTCCEEEEEC
T ss_pred CCCcEEEEE-CcHHHHHHHHHHHHHHHHcCCCEEEEEE
Confidence 788888777 8999999999999999999855777777
No 117
>3av3_A Phosphoribosylglycinamide formyltransferase; structural genomics, riken structural genomics/proteomics in RSGI, rossmann fold; HET: MSE; 1.70A {Geobacillus kaustophilus}
Probab=38.22 E-value=1.8e+02 Score=24.59 Aligned_cols=104 Identities=11% Similarity=0.078 Sum_probs=0.0
Q ss_pred cceEEEecCCCccCHHHHHHHHHHHHhC--CCCcEEEEEeCCCCCCchhhhhhhhccccCCCCCeeEEEcCCCCCCCCCC
Q 044031 2 KKTIALYPGPAFHHMISMVELGKLILQH--RSDVSITILVPSMPLEESKTCSYINSISHRLNPIISFYYLPAIQMPSETL 79 (468)
Q Consensus 2 ~~~Iv~~~~~~~GHv~P~l~LA~~L~~~--G~~h~Vt~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~i~~~~lp~~~~ 79 (468)
|++|+++-.++.. -+.++.+.|.+. + |+|..+.+..+.......+ ...+|.+..++...+...
T Consensus 3 m~ki~vl~sG~g~---~~~~~l~~l~~~~l~--~~I~~Vit~~~~~~v~~~A--------~~~gIp~~~~~~~~~~~~-- 67 (212)
T 3av3_A 3 MKRLAVFASGSGT---NFQAIVDAAKRGDLP--ARVALLVCDRPGAKVIERA--------ARENVPAFVFSPKDYPSK-- 67 (212)
T ss_dssp CEEEEEECCSSCH---HHHHHHHHHHTTCCC--EEEEEEEESSTTCHHHHHH--------HHTTCCEEECCGGGSSSH--
T ss_pred CcEEEEEEECCcH---HHHHHHHHHHhCCCC--CeEEEEEeCCCCcHHHHHH--------HHcCCCEEEeCcccccch--
Q ss_pred ChhHHHHHHHHHhhHHHHHHHHhhhcCCCccEEEe-----cCcHHHhhhCCCCeEEEecc
Q 044031 80 SRADIAIESIKLNSSNVFQALENISLTSKILSFII-----TSTTSFSYHPNIPTYTYFNS 134 (468)
Q Consensus 80 ~~~~~~~~~~~~~~~~l~~ll~~~~~~~~pD~vI~-----~~~~~vA~~lgIP~i~~~~~ 134 (468)
....+.+.+.++++ +||++|. .-...+-+.....++-++++
T Consensus 68 ----------~~~~~~~~~~l~~~----~~Dliv~a~y~~il~~~~l~~~~~~~iNiHpS 113 (212)
T 3av3_A 68 ----------AAFESEILRELKGR----QIDWIALAGYMRLIGPTLLSAYEGKIVNIHPS 113 (212)
T ss_dssp ----------HHHHHHHHHHHHHT----TCCEEEESSCCSCCCHHHHHHTTTCEEEEESS
T ss_pred ----------hhhHHHHHHHHHhc----CCCEEEEchhhhhCCHHHHhhhcCCEEEEecC
No 118
>1qgu_B Protein (nitrogenase molybdenum iron protein); biological nitrogen fixation, nitrogen metabolism, molybdoenzymes, electron transfer; HET: HCA CFM CLF; 1.60A {Klebsiella pneumoniae} SCOP: c.92.2.3 PDB: 1h1l_B* 1qh1_B* 1qh8_B*
Probab=37.45 E-value=1.6e+02 Score=28.92 Aligned_cols=33 Identities=6% Similarity=-0.074 Sum_probs=26.6
Q ss_pred HHHHHHHhhhcCCCccEEEe-cCcHHHhhhC-------CCCeEEE
Q 044031 95 NVFQALENISLTSKILSFII-TSTTSFSYHP-------NIPTYTY 131 (468)
Q Consensus 95 ~l~~ll~~~~~~~~pD~vI~-~~~~~vA~~l-------gIP~i~~ 131 (468)
.+.+++++. +||++|. .....+|+++ |||++.+
T Consensus 425 ~l~~~i~~~----~pDLiig~~~~~~~a~~~~~~g~~~gip~v~i 465 (519)
T 1qgu_B 425 HFRSLMFTR----QPDFMIGNSYGKFIQRDTLAKGKAFEVPLIRL 465 (519)
T ss_dssp HHHHHHHHH----CCSEEEECGGGHHHHHHHHHHCGGGCCCEEEC
T ss_pred HHHHHHhhc----CCCEEEECcchHHHHHHhhcccccCCCCeEEe
Confidence 445666766 9999999 7788899999 9999754
No 119
>4b4o_A Epimerase family protein SDR39U1; isomerase; HET: NDP PE4; 2.70A {Homo sapiens}
Probab=37.32 E-value=30 Score=31.06 Aligned_cols=33 Identities=12% Similarity=0.169 Sum_probs=24.6
Q ss_pred CcceEEEecCCCccCHHHHHHHHHHHHhCCCCcEEEEEeCC
Q 044031 1 MKKTIALYPGPAFHHMISMVELGKLILQHRSDVSITILVPS 41 (468)
Q Consensus 1 m~~~Iv~~~~~~~GHv~P~l~LA~~L~~~G~~h~Vt~~~~~ 41 (468)
|| |++ + |+.|.+= -.|+++|.++| |+|+.++-.
T Consensus 1 Mk--ILV-T-GatGfIG--~~L~~~L~~~G--~~V~~l~R~ 33 (298)
T 4b4o_A 1 MR--VLV-G-GGTGFIG--TALTQLLNARG--HEVTLVSRK 33 (298)
T ss_dssp CE--EEE-E-TTTSHHH--HHHHHHHHHTT--CEEEEEESS
T ss_pred CE--EEE-E-CCCCHHH--HHHHHHHHHCC--CEEEEEECC
Confidence 54 544 3 6777664 56899999999 999998653
No 120
>1iow_A DD-ligase, DDLB, D-ALA\:D-Ala ligase; glycogen phosphorylase, cell WALL, peptidoglycan synthesis, vancomycin, ADP binding; HET: ADP PHY; 1.90A {Escherichia coli} SCOP: c.30.1.2 d.142.1.1 PDB: 1iov_A* 2dln_A* 3v4z_A*
Probab=37.09 E-value=42 Score=30.08 Aligned_cols=39 Identities=15% Similarity=0.105 Sum_probs=28.8
Q ss_pred CcceEEEecCCCc-cCHH---HHHHHHHHHHhCCCCcEEEEEeCC
Q 044031 1 MKKTIALYPGPAF-HHMI---SMVELGKLILQHRSDVSITILVPS 41 (468)
Q Consensus 1 m~~~Iv~~~~~~~-GHv~---P~l~LA~~L~~~G~~h~Vt~~~~~ 41 (468)
||++|+++..+.. -|-. ....+++.|.++| |+|.++...
T Consensus 1 m~~~i~il~gg~s~e~~~s~~~~~~l~~al~~~G--~~v~~~~~~ 43 (306)
T 1iow_A 1 MTDKIAVLLGGTSAEREVSLNSGAAVLAGLREGG--IDAYPVDPK 43 (306)
T ss_dssp CCCEEEEECCCSSTTHHHHHHHHHHHHHHHHHTT--CEEEEECTT
T ss_pred CCcEEEEEeCCCCccceEcHHhHHHHHHHHHHCC--CeEEEEecC
Confidence 8889999886532 2322 4467999999999 999998543
No 121
>1pjq_A CYSG, siroheme synthase; rossman fold, nucleotide binding motif, SAM, NAD, phosphoserine, transferase/oxidoreductase/lyase complex; HET: SEP PGE SAH; 2.21A {Salmonella typhimurium} SCOP: c.2.1.11 c.90.1.1 e.37.1.1 PDB: 1pjs_A* 1pjt_A*
Probab=36.78 E-value=85 Score=30.39 Aligned_cols=150 Identities=13% Similarity=0.052 Sum_probs=73.1
Q ss_pred CceEEeccCCCcCCCHHHHHHHHHHHHhCCCcEEEEEeCCCCccccCCChhHHhhccCCCeEec-CCCCHHhhhCccCcc
Q 044031 270 GSVVFLCFGSRGTFSAPQLKEIAIGLERSNQRFLWVVRNPSNAAEAELPEGFLERTKERGLVVK-SWAPQSTILGHESVG 348 (468)
Q Consensus 270 ~~~v~vs~GS~~~~~~~~~~~~~~al~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~-~~~pq~~il~~~~~~ 348 (468)
+.++.|..|..+ ...++.|.+.|..+.++... +.+.+.+.....++.+. +-....+ |...++
T Consensus 13 ~~vlVvGgG~va-------~~k~~~L~~~ga~V~vi~~~--------~~~~~~~l~~~~~i~~~~~~~~~~~-l~~~~l- 75 (457)
T 1pjq_A 13 RDCLIVGGGDVA-------ERKARLLLEAGARLTVNALT--------FIPQFTVWANEGMLTLVEGPFDETL-LDSCWL- 75 (457)
T ss_dssp CEEEEECCSHHH-------HHHHHHHHHTTBEEEEEESS--------CCHHHHHHHTTTSCEEEESSCCGGG-GTTCSE-
T ss_pred CEEEEECCCHHH-------HHHHHHHHhCcCEEEEEcCC--------CCHHHHHHHhcCCEEEEECCCCccc-cCCccE-
Confidence 348888777654 44566677788887665433 22233322222233221 2222223 444444
Q ss_pred eEEecCCcch-----HHHHHHhCCcE--EecccccchhhHHHHHHhhcceeeeeccCCcccccCCCCccccHHHHHHHHH
Q 044031 349 GFVTHCGWSS-----VVEAVTYGVPM--IAWPLYAEQFLNSVALVQEMKVAMPMFLNGEEETIGNGEGVVSAERVEERVR 421 (468)
Q Consensus 349 ~~ithgG~~s-----~~eal~~GvP~--v~~P~~~DQ~~na~~~~~~~g~g~~~~~~~~~~~~~~~~~~~~~~~l~~av~ 421 (468)
+|.--|--. ..+|-..|+|+ +.-|-..|...-|-.-...+-+|+. .+ ++. -.-+..|++.|+
T Consensus 76 -Vi~at~~~~~n~~i~~~a~~~~i~vn~~d~~e~~~~~~pa~~~~~~l~iaIs--T~------Gks--p~la~~ir~~ie 144 (457)
T 1pjq_A 76 -AIAATDDDTVNQRVSDAAESRRIFCNVVDAPKAASFIMPSIIDRSPLMVAVS--SG------GTS--PVLARLLREKLE 144 (457)
T ss_dssp -EEECCSCHHHHHHHHHHHHHTTCEEEETTCTTSSSEECCEEEEETTEEEEEE--CT------TSC--HHHHHHHHHHHH
T ss_pred -EEEcCCCHHHHHHHHHHHHHcCCEEEECCCcccCceEeeeEEEeCCeEEEEE--CC------CCC--hHHHHHHHHHHH
Confidence 777777654 34456678886 2223222222100000011233443 21 111 122567778888
Q ss_pred HHhcCchhHHHHHHHHHHHHHHHHhhc
Q 044031 422 ELMMGSEGKALRERSLEMRMMAATAWN 448 (468)
Q Consensus 422 ~~l~~~~~~~~~~~a~~l~~~~~~a~~ 448 (468)
+.+.. ....+-+.+.++++.+++...
T Consensus 145 ~~l~~-~~~~~~~~~~~~R~~~~~~~~ 170 (457)
T 1pjq_A 145 SLLPQ-HLGQVARYAGQLRARVKKQFA 170 (457)
T ss_dssp HHSCT-THHHHHHHHHHHHHHHHHHCC
T ss_pred Hhcch-hHHHHHHHHHHHHHHHHhhCC
Confidence 87753 233566677777777766543
No 122
>1u0t_A Inorganic polyphosphate/ATP-NAD kinase; alpha-beta, beta sandwich, structural genomics, PSI, protein structure initiative; 2.30A {Mycobacterium tuberculosis} SCOP: e.52.1.1 PDB: 1u0r_A 1y3i_A* 1y3h_A
Probab=35.75 E-value=48 Score=30.18 Aligned_cols=27 Identities=15% Similarity=0.216 Sum_probs=23.5
Q ss_pred ceEEecCCcchHHHHHHh----CCcEEeccc
Q 044031 348 GGFVTHCGWSSVVEAVTY----GVPMIAWPL 374 (468)
Q Consensus 348 ~~~ithgG~~s~~eal~~----GvP~v~~P~ 374 (468)
+++|+-||=||+.+++.. ++|+++++.
T Consensus 77 d~vi~~GGDGT~l~a~~~~~~~~~pvlgi~~ 107 (307)
T 1u0t_A 77 ELVLVLGGDGTFLRAAELARNASIPVLGVNL 107 (307)
T ss_dssp CCEEEEECHHHHHHHHHHHHHHTCCEEEEEC
T ss_pred CEEEEEeCCHHHHHHHHHhccCCCCEEEEeC
Confidence 449999999999999864 899999985
No 123
>4dzz_A Plasmid partitioning protein PARF; deviant walker BOX, DNA segregation, unknown function; HET: ADP; 1.80A {Escherichia coli} PDB: 4e03_A* 4e07_A* 4e09_A*
Probab=35.60 E-value=1.3e+02 Score=24.68 Aligned_cols=39 Identities=13% Similarity=0.255 Sum_probs=31.0
Q ss_pred CcceEEEe-cCCCccCHHHHHHHHHHHHhCCCCcEEEEEeCCC
Q 044031 1 MKKTIALY-PGPAFHHMISMVELGKLILQHRSDVSITILVPSM 42 (468)
Q Consensus 1 m~~~Iv~~-~~~~~GHv~P~l~LA~~L~~~G~~h~Vt~~~~~~ 42 (468)
|+ .|+++ +-|+-|-..-...||..|+++| ++|.++-.++
T Consensus 1 M~-vi~v~s~kgG~GKTt~a~~la~~la~~g--~~vlliD~D~ 40 (206)
T 4dzz_A 1 MK-VISFLNPKGGSGKTTAVINIATALSRSG--YNIAVVDTDP 40 (206)
T ss_dssp CE-EEEECCSSTTSSHHHHHHHHHHHHHHTT--CCEEEEECCT
T ss_pred Ce-EEEEEeCCCCccHHHHHHHHHHHHHHCC--CeEEEEECCC
Confidence 53 34444 3478999999999999999999 9999996554
No 124
>3pdi_A Nitrogenase MOFE cofactor biosynthesis protein NI; nitrogenase cofactor maturation, NIFB, nifdk, NIFH; HET: CZL; 2.40A {Azotobacter vinelandii}
Probab=35.56 E-value=24 Score=34.71 Aligned_cols=33 Identities=6% Similarity=0.115 Sum_probs=26.7
Q ss_pred HHHHHHHhhhcCCCccEEEe-cCcHHHhhhCCCCeEEE
Q 044031 95 NVFQALENISLTSKILSFII-TSTTSFSYHPNIPTYTY 131 (468)
Q Consensus 95 ~l~~ll~~~~~~~~pD~vI~-~~~~~vA~~lgIP~i~~ 131 (468)
.+.+.+++. +||++|. .....+|+++|||++.+
T Consensus 392 el~~~i~~~----~pDL~ig~~~~~~~a~k~gIP~~~~ 425 (483)
T 3pdi_A 392 VLLKTVDEY----QADILIAGGRNMYTALKGRVPFLDI 425 (483)
T ss_dssp HHHHHHHHT----TCSEEECCGGGHHHHHHTTCCBCCC
T ss_pred HHHHHHHhc----CCCEEEECCchhHHHHHcCCCEEEe
Confidence 455666666 9999999 77888999999998743
No 125
>3v2h_A D-beta-hydroxybutyrate dehydrogenase; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; 3.00A {Sinorhizobium meliloti}
Probab=35.38 E-value=45 Score=29.75 Aligned_cols=33 Identities=9% Similarity=0.095 Sum_probs=26.4
Q ss_pred cceEEEecCCCccCHHHHHHHHHHHHhCCCCcEEEEEe
Q 044031 2 KKTIALYPGPAFHHMISMVELGKLILQHRSDVSITILV 39 (468)
Q Consensus 2 ~~~Iv~~~~~~~GHv~P~l~LA~~L~~~G~~h~Vt~~~ 39 (468)
+.++++++.++.| =..++|++|+++| ++|.++.
T Consensus 24 ~~k~~lVTGas~G---IG~~ia~~la~~G--~~V~~~~ 56 (281)
T 3v2h_A 24 MTKTAVITGSTSG---IGLAIARTLAKAG--ANIVLNG 56 (281)
T ss_dssp TTCEEEEETCSSH---HHHHHHHHHHHTT--CEEEEEC
T ss_pred CCCEEEEeCCCcH---HHHHHHHHHHHCC--CEEEEEe
Confidence 3468888877664 4678999999999 9998873
No 126
>3ezx_A MMCP 1, monomethylamine corrinoid protein 1; N terminal all helical bundle C terminal rossmann fold, cobalt, metal-binding; HET: HCB; 2.56A {Methanosarcina barkeri}
Probab=35.33 E-value=46 Score=28.51 Aligned_cols=41 Identities=12% Similarity=-0.039 Sum_probs=36.5
Q ss_pred ceEEEecCCCccCHHHHHHHHHHHHhCCCCcEEEEEeCCCCCC
Q 044031 3 KTIALYPGPAFHHMISMVELGKLILQHRSDVSITILVPSMPLE 45 (468)
Q Consensus 3 ~~Iv~~~~~~~GHv~P~l~LA~~L~~~G~~h~Vt~~~~~~~~~ 45 (468)
++|++.+.+...|-....-++..|..+| ++|.......+.+
T Consensus 93 ~~vll~~v~gd~HdiG~~iv~~~l~~~G--~~Vi~LG~~vp~e 133 (215)
T 3ezx_A 93 GLAITFVAEGDIHDIGHRLVTTMLGANG--FQIVDLGVDVLNE 133 (215)
T ss_dssp CEEEEEECTTCCCCHHHHHHHHHHHHTS--CEEEECCSSCCHH
T ss_pred CeEEEEeCCCChhHHHHHHHHHHHHHCC--CeEEEcCCCCCHH
Confidence 5899999999999999999999999999 9999987655443
No 127
>3lqk_A Dipicolinate synthase subunit B; flavoprotein, PSI2, MCSG, structural protein structure initiative, midwest center for structural genomics; 2.10A {Bacillus halodurans}
Probab=35.14 E-value=41 Score=28.52 Aligned_cols=37 Identities=11% Similarity=0.113 Sum_probs=30.4
Q ss_pred ceEEEecCCCccCHH-HHHHHHHHHHhCCCCcEEEEEeCCC
Q 044031 3 KTIALYPGPAFHHMI-SMVELGKLILQHRSDVSITILVPSM 42 (468)
Q Consensus 3 ~~Iv~~~~~~~GHv~-P~l~LA~~L~~~G~~h~Vt~~~~~~ 42 (468)
+||++.-.|+ +..+ -.+.|.++|.++| ++|.++.+..
T Consensus 8 k~I~lgiTGs-~aa~~k~~~ll~~L~~~g--~eV~vv~T~~ 45 (201)
T 3lqk_A 8 KHVGFGLTGS-HCTYHEVLPQMERLVELG--AKVTPFVTHT 45 (201)
T ss_dssp CEEEEECCSC-GGGGGGTHHHHHHHHHTT--CEEEEECSSC
T ss_pred CEEEEEEECh-HHHHHHHHHHHHHHhhCC--CEEEEEEChh
Confidence 5788888787 5555 7999999999999 9999996654
No 128
>1z82_A Glycerol-3-phosphate dehydrogenase; TM0378, structural genom joint center for structural genomics, JCSG, protein structu initiative, PSI; HET: MSE NDP G3H G3P; 2.00A {Thermotoga maritima}
Probab=34.77 E-value=26 Score=32.35 Aligned_cols=32 Identities=3% Similarity=0.165 Sum_probs=26.8
Q ss_pred CcceEEEecCCCccCHHHHHHHHHHHHhCCCCcEEEEEe
Q 044031 1 MKKTIALYPGPAFHHMISMVELGKLILQHRSDVSITILV 39 (468)
Q Consensus 1 m~~~Iv~~~~~~~GHv~P~l~LA~~L~~~G~~h~Vt~~~ 39 (468)
|.++|.|+-.|..| ..+|..|++.| |+|+++.
T Consensus 13 ~~~kI~iIG~G~mG-----~ala~~L~~~G--~~V~~~~ 44 (335)
T 1z82_A 13 MEMRFFVLGAGSWG-----TVFAQMLHENG--EEVILWA 44 (335)
T ss_dssp -CCEEEEECCSHHH-----HHHHHHHHHTT--CEEEEEC
T ss_pred cCCcEEEECcCHHH-----HHHHHHHHhCC--CeEEEEe
Confidence 56789999888777 47899999999 9999984
No 129
>2ywr_A Phosphoribosylglycinamide formyltransferase; rossmann fold, structural genomics, NPPSFA; 1.77A {Aquifex aeolicus}
Probab=34.28 E-value=2.2e+02 Score=24.22 Aligned_cols=86 Identities=10% Similarity=0.032 Sum_probs=46.1
Q ss_pred cceEEEecCCCccCHHHHHHHHHHHHhCCCCc--EEEEEeCCCCCCchhhhhhhhccccCCCCCeeEEEcCCCCCCCCCC
Q 044031 2 KKTIALYPGPAFHHMISMVELGKLILQHRSDV--SITILVPSMPLEESKTCSYINSISHRLNPIISFYYLPAIQMPSETL 79 (468)
Q Consensus 2 ~~~Iv~~~~~~~GHv~P~l~LA~~L~~~G~~h--~Vt~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~i~~~~lp~~~~ 79 (468)
|+||+++..++... +.++.+.|.+.+ | +|..+.+..+... ....... .+|.+..++.. +..
T Consensus 1 m~rI~vl~SG~g~~---~~~~l~~l~~~~--~~~~i~~Vvs~~~~~~--~~~~A~~------~gIp~~~~~~~----~~~ 63 (216)
T 2ywr_A 1 MLKIGVLVSGRGSN---LQAIIDAIESGK--VNASIELVISDNPKAY--AIERCKK------HNVECKVIQRK----EFP 63 (216)
T ss_dssp CEEEEEEECSCCHH---HHHHHHHHHTTS--SCEEEEEEEESCTTCH--HHHHHHH------HTCCEEECCGG----GSS
T ss_pred CCEEEEEEeCCcHH---HHHHHHHHHhCC--CCCeEEEEEeCCCChH--HHHHHHH------cCCCEEEeCcc----ccc
Confidence 14788887666533 556667788777 7 7776665443321 1111112 26666654432 111
Q ss_pred ChhHHHHHHHHHhhHHHHHHHHhhhcCCCccEEEe-cC
Q 044031 80 SRADIAIESIKLNSSNVFQALENISLTSKILSFII-TS 116 (468)
Q Consensus 80 ~~~~~~~~~~~~~~~~l~~ll~~~~~~~~pD~vI~-~~ 116 (468)
+.. ...+.+.+.++++ ++|++|+ .|
T Consensus 64 ~r~--------~~~~~~~~~l~~~----~~Dliv~a~y 89 (216)
T 2ywr_A 64 SKK--------EFEERMALELKKK----GVELVVLAGF 89 (216)
T ss_dssp SHH--------HHHHHHHHHHHHT----TCCEEEESSC
T ss_pred chh--------hhhHHHHHHHHhc----CCCEEEEeCc
Confidence 111 1112345566666 9999999 44
No 130
>3da8_A Probable 5'-phosphoribosylglycinamide formyltransferase PURN; glycinamide ribonucleotide transformylase, structure; 1.30A {Mycobacterium tuberculosis} PDB: 3dcj_A*
Probab=33.93 E-value=1.5e+02 Score=25.28 Aligned_cols=84 Identities=5% Similarity=-0.030 Sum_probs=44.3
Q ss_pred CcceEEEecCCCccCHHHHHHHHHHHHh-CCCCcEEEEEeCCCCCCchhhhhhhhccccCCCCCeeEEEcCCCCCCCCCC
Q 044031 1 MKKTIALYPGPAFHHMISMVELGKLILQ-HRSDVSITILVPSMPLEESKTCSYINSISHRLNPIISFYYLPAIQMPSETL 79 (468)
Q Consensus 1 m~~~Iv~~~~~~~GHv~P~l~LA~~L~~-~G~~h~Vt~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~i~~~~lp~~~~ 79 (468)
|+++|+++..+....+..++ +.+.+ .+ ++|..+.+..... . .... ...+|.+..++.. +..
T Consensus 11 ~~~ri~vl~SG~gsnl~all---~~~~~~~~--~eI~~Vis~~~a~--~-~~~A------~~~gIp~~~~~~~----~~~ 72 (215)
T 3da8_A 11 APARLVVLASGTGSLLRSLL---DAAVGDYP--ARVVAVGVDRECR--A-AEIA------AEASVPVFTVRLA----DHP 72 (215)
T ss_dssp SSEEEEEEESSCCHHHHHHH---HHSSTTCS--EEEEEEEESSCCH--H-HHHH------HHTTCCEEECCGG----GSS
T ss_pred CCcEEEEEEeCChHHHHHHH---HHHhccCC--CeEEEEEeCCchH--H-HHHH------HHcCCCEEEeCcc----ccc
Confidence 35689998877755544444 33332 34 7888887655421 1 1111 2226776655321 111
Q ss_pred ChhHHHHHHHHHhhHHHHHHHHhhhcCCCccEEEe
Q 044031 80 SRADIAIESIKLNSSNVFQALENISLTSKILSFII 114 (468)
Q Consensus 80 ~~~~~~~~~~~~~~~~l~~ll~~~~~~~~pD~vI~ 114 (468)
+.. ...+.+.+.++++ ++|++|.
T Consensus 73 ~r~--------~~d~~~~~~l~~~----~~Dlivl 95 (215)
T 3da8_A 73 SRD--------AWDVAITAATAAH----EPDLVVS 95 (215)
T ss_dssp SHH--------HHHHHHHHHHHTT----CCSEEEE
T ss_pred chh--------hhhHHHHHHHHhh----CCCEEEE
Confidence 111 1123455666666 9999998
No 131
>4egb_A DTDP-glucose 4,6-dehydratase; rhamnose pathway, center for structural genomics of infectio diseases, csgid, niaid; HET: NAD SUC; 3.00A {Bacillus anthracis}
Probab=33.71 E-value=2.6e+02 Score=25.09 Aligned_cols=32 Identities=13% Similarity=-0.010 Sum_probs=20.9
Q ss_pred EEEecCCCccCHHHHHHHHHHHHhCCCCcEEEEEe
Q 044031 5 IALYPGPAFHHMISMVELGKLILQHRSDVSITILV 39 (468)
Q Consensus 5 Iv~~~~~~~GHv~P~l~LA~~L~~~G~~h~Vt~~~ 39 (468)
-++++ |+.|.+ ...|+++|.++|++++|+.+.
T Consensus 26 ~vlVt-GatG~i--G~~l~~~L~~~g~~~~v~~~~ 57 (346)
T 4egb_A 26 NILVT-GGAGFI--GSNFVHYMLQSYETYKIINFD 57 (346)
T ss_dssp EEEEE-TTTSHH--HHHHHHHHHHHCTTEEEEEEE
T ss_pred eEEEE-CCccHH--HHHHHHHHHhhCCCcEEEEEe
Confidence 34444 566755 468899999999555555553
No 132
>3g17_A Similar to 2-dehydropantoate 2-reductase; structural genomics, putative 2-dehydropantoate 2-reductase, protein structure initiative; 2.30A {Staphylococcus aureus subsp}
Probab=33.66 E-value=13 Score=33.72 Aligned_cols=34 Identities=15% Similarity=0.084 Sum_probs=27.1
Q ss_pred CcceEEEecCCCccCHHHHHHHHHHHHhCCCCcEEEEEeCC
Q 044031 1 MKKTIALYPGPAFHHMISMVELGKLILQHRSDVSITILVPS 41 (468)
Q Consensus 1 m~~~Iv~~~~~~~GHv~P~l~LA~~L~~~G~~h~Vt~~~~~ 41 (468)
|+++|+++-.|+.|- .+|..|++.| |+|+++...
T Consensus 1 M~mkI~iiGaGa~G~-----~~a~~L~~~g--~~V~~~~r~ 34 (294)
T 3g17_A 1 MSLSVAIIGPGAVGT-----TIAYELQQSL--PHTTLIGRH 34 (294)
T ss_dssp --CCEEEECCSHHHH-----HHHHHHHHHC--TTCEEEESS
T ss_pred CCcEEEEECCCHHHH-----HHHHHHHHCC--CeEEEEEec
Confidence 778899998888885 6788999999 999999543
No 133
>4e5s_A MCCFLIKE protein (BA_5613); structural genomics, center for structural genomi infectious diseases, csgid, serine peptidase S66; 1.95A {Bacillus anthracis}
Probab=33.50 E-value=48 Score=30.61 Aligned_cols=75 Identities=9% Similarity=0.123 Sum_probs=54.3
Q ss_pred CCCHHHHHHHHHHHHhCCCcEEEEEeCCCCccccCCChhHHhhccCCCeEecCCCCHHhhhCccCcceEEecCCcchHHH
Q 044031 282 TFSAPQLKEIAIGLERSNQRFLWVVRNPSNAAEAELPEGFLERTKERGLVVKSWAPQSTILGHESVGGFVTHCGWSSVVE 361 (468)
Q Consensus 282 ~~~~~~~~~~~~al~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~pq~~il~~~~~~~~ithgG~~s~~e 361 (468)
..+.+...++.+++.+...+.||.+.++.. -..+.++++...+-.+|.. ||=..-...+.-
T Consensus 61 g~d~~Ra~dL~~a~~Dp~i~aI~~~rGG~g-----------------~~rlL~~lD~~~i~~~PK~--~~GySDiTaL~~ 121 (331)
T 4e5s_A 61 SSISSRVQDLHEAFRDPNVKAILTTLGGYN-----------------SNGLLKYLDYDLIRENPKF--FCGYSDITALNN 121 (331)
T ss_dssp CCHHHHHHHHHHHHHCTTEEEEEESCCCSC-----------------GGGGGGGCCHHHHHTSCCE--EEECGGGHHHHH
T ss_pred CCHHHHHHHHHHHhhCCCCCEEEEcccccc-----------------HHHHHhhcChhHHHhCCeE--EEEecchHHHHH
Confidence 345567888999999999999998887611 0113366777777677777 888888778877
Q ss_pred HHH--hCCcEEecccc
Q 044031 362 AVT--YGVPMIAWPLY 375 (468)
Q Consensus 362 al~--~GvP~v~~P~~ 375 (468)
+++ .|+..+.=|..
T Consensus 122 al~~~~G~~t~hGp~~ 137 (331)
T 4e5s_A 122 AIYTKTGLVTYSGPHF 137 (331)
T ss_dssp HHHHHHCBCEEECCCG
T ss_pred HHHHhhCCcEEEccch
Confidence 776 58888777763
No 134
>2ew2_A 2-dehydropantoate 2-reductase, putative; alpha-structure, alpha-beta structure, structural genomics, protein structure initiative; HET: MSE; 2.00A {Enterococcus faecalis}
Probab=33.43 E-value=27 Score=31.57 Aligned_cols=32 Identities=22% Similarity=0.234 Sum_probs=24.8
Q ss_pred CcceEEEecCCCccCHHHHHHHHHHHHhCCCCcEEEEEe
Q 044031 1 MKKTIALYPGPAFHHMISMVELGKLILQHRSDVSITILV 39 (468)
Q Consensus 1 m~~~Iv~~~~~~~GHv~P~l~LA~~L~~~G~~h~Vt~~~ 39 (468)
|+++|+++-.|..|. .+|..|+++| |+|+++.
T Consensus 2 ~~m~i~iiG~G~~G~-----~~a~~l~~~g--~~V~~~~ 33 (316)
T 2ew2_A 2 NAMKIAIAGAGAMGS-----RLGIMLHQGG--NDVTLID 33 (316)
T ss_dssp --CEEEEECCSHHHH-----HHHHHHHHTT--CEEEEEC
T ss_pred CCCeEEEECcCHHHH-----HHHHHHHhCC--CcEEEEE
Confidence 346899997766664 6789999999 9999983
No 135
>1uan_A Hypothetical protein TT1542; rossmann-like, structural genomics, riken structural genomics/proteomics initiative, RSGI, unknown function; 2.00A {Thermus thermophilus} SCOP: c.134.1.1
Probab=33.10 E-value=2.2e+02 Score=24.25 Aligned_cols=92 Identities=12% Similarity=-0.030 Sum_probs=46.6
Q ss_pred CcceEEEecCCCccCHHHHHHHHHHHHhCCCCcEEEEEeCCCCCCc----hhhh-----hhhhccccCCCCCeeEEEcCC
Q 044031 1 MKKTIALYPGPAFHHMISMVELGKLILQHRSDVSITILVPSMPLEE----SKTC-----SYINSISHRLNPIISFYYLPA 71 (468)
Q Consensus 1 m~~~Iv~~~~~~~GHv~P~l~LA~~L~~~G~~h~Vt~~~~~~~~~~----~~~~-----~~~~~~~~~~~~~i~~~~i~~ 71 (468)
|+.-+++.+.|-.=-+.-.=.|+ .+.++| ++|++++-...... ...+ +....+ ....+.+..+++
T Consensus 1 m~~vL~v~aHPDDe~l~~ggtia-~~~~~G--~~v~vv~lT~G~~g~~~~~~~R~~E~~~A~~~l---G~~~~~~l~~~D 74 (227)
T 1uan_A 1 MLDLLVVAPHPDDGELGCGGTLA-RAKAEG--LSTGILDLTRGEMGSKGTPEEREKEVAEASRIL---GLDFRGNLGFPD 74 (227)
T ss_dssp CEEEEEEESSTTHHHHHHHHHHH-HHHHTT--CCEEEEEEECCTTTCCSCHHHHHHHHHHHHHHH---TCSEEEEEEECT
T ss_pred CceEEEEEeCCCcHHHhHHHHHH-HHHhCC--CcEEEEEEcCCCCCCCCCHHHHHHHHHHHHHhc---CCCeEEECCCCC
Confidence 54445666665443333333444 455789 88777754433221 0011 111112 222345666666
Q ss_pred CCCCCCCCChhHHHHHHHHHhhHHHHHHHHhhhcCCCccEEEe
Q 044031 72 IQMPSETLSRADIAIESIKLNSSNVFQALENISLTSKILSFII 114 (468)
Q Consensus 72 ~~lp~~~~~~~~~~~~~~~~~~~~l~~ll~~~~~~~~pD~vI~ 114 (468)
..+... ......+.++++++ +||+|++
T Consensus 75 ~~l~~~------------~~~~~~l~~~ir~~----~P~~V~t 101 (227)
T 1uan_A 75 GGLADV------------PEQRLKLAQALRRL----RPRVVFA 101 (227)
T ss_dssp TCCCCC------------HHHHHHHHHHHHHH----CEEEEEE
T ss_pred CCCCCh------------HHHHHHHHHHHHHh----CCCEEEe
Confidence 544321 12234566777887 9999998
No 136
>3kuu_A Phosphoribosylaminoimidazole carboxylase catalyti PURE; 3-layer (ABA) sandwich, rossmann fold, csgid, lyase, structu genomics; 1.41A {Yersinia pestis} SCOP: c.23.8.1 PDB: 1d7a_A* 1qcz_A 2ate_A* 2nsl_A* 2nsh_A* 2nsj_A*
Probab=33.06 E-value=1.1e+02 Score=25.17 Aligned_cols=37 Identities=8% Similarity=0.047 Sum_probs=30.6
Q ss_pred CcceEEEecCCCccCHHHHHHHHHHHHhCCCCcEEEEE
Q 044031 1 MKKTIALYPGPAFHHMISMVELGKLILQHRSDVSITIL 38 (468)
Q Consensus 1 m~~~Iv~~~~~~~GHv~P~l~LA~~L~~~G~~h~Vt~~ 38 (468)
|+++|+++. ++.+|+.-+-..++.|.+-|=.++|.++
T Consensus 11 m~~~V~Iim-GS~SD~~v~~~a~~~L~~~Gi~~ev~V~ 47 (174)
T 3kuu_A 11 AGVKIAIVM-GSKSDWATMQFAADVLTTLNVPFHVEVV 47 (174)
T ss_dssp CCCCEEEEE-SSGGGHHHHHHHHHHHHHTTCCEEEEEC
T ss_pred CCCcEEEEE-CcHHHHHHHHHHHHHHHHcCCCEEEEEE
Confidence 667777776 8999999999999999998855777777
No 137
>3u7q_A Nitrogenase molybdenum-iron protein alpha chain; multiple rossmann fold domains, reductase, nitrogen fixing, oxidoreductase; HET: HCA ICS 1CL CLF; 1.00A {Azotobacter vinelandii} SCOP: c.92.2.3 PDB: 1g21_A* 1g20_A* 1fp4_A* 1m1n_A* 1l5h_A* 1m1y_A* 1m34_A* 1n2c_A* 2afh_A* 2afi_A* 2afk_A* 2min_A* 3min_A* 3k1a_A* 1h1l_A* 1qgu_A* 1qh1_A* 1qh8_A*
Probab=32.52 E-value=28 Score=34.27 Aligned_cols=33 Identities=12% Similarity=-0.077 Sum_probs=27.2
Q ss_pred HHHHHHHhhhcCCCccEEEe-cCcHHHhhhCCCCeEEE
Q 044031 95 NVFQALENISLTSKILSFII-TSTTSFSYHPNIPTYTY 131 (468)
Q Consensus 95 ~l~~ll~~~~~~~~pD~vI~-~~~~~vA~~lgIP~i~~ 131 (468)
.+.+++++. +||++|. .....+|+++|||++-+
T Consensus 408 el~~~i~~~----~pDL~ig~~~~~~ia~k~gIP~~~~ 441 (492)
T 3u7q_A 408 EFEEFVKRI----KPDLIGSGIKEKFIFQKMGIPFREM 441 (492)
T ss_dssp HHHHHHHHH----CCSEEEECHHHHHHHHHTTCCEEES
T ss_pred HHHHHHHhc----CCcEEEeCcchhHHHHHcCCCEEec
Confidence 456667777 9999999 77778999999998853
No 138
>1g5t_A COB(I)alamin adenosyltransferase; P-loop protein, cobalamin biosynthesis, RECA fold; HET: ATP; 1.80A {Salmonella typhimurium} SCOP: c.37.1.11 PDB: 1g5r_A* 1g64_A*
Probab=32.39 E-value=2.2e+02 Score=23.81 Aligned_cols=38 Identities=8% Similarity=0.075 Sum_probs=33.7
Q ss_pred ceEEEecCCCccCHHHHHHHHHHHHhCCCCcEEEEEeCCC
Q 044031 3 KTIALYPGPAFHHMISMVELGKLILQHRSDVSITILVPSM 42 (468)
Q Consensus 3 ~~Iv~~~~~~~GHv~P~l~LA~~L~~~G~~h~Vt~~~~~~ 42 (468)
..|.+++..+.|-..-.+.+|-+.+.+| ++|.|+....
T Consensus 29 g~i~v~tG~GkGKTTaA~GlalRA~g~G--~rV~~vQF~K 66 (196)
T 1g5t_A 29 GIIIVFTGNGKGKTTAAFGTAARAVGHG--KNVGVVQFIK 66 (196)
T ss_dssp CCEEEEESSSSCHHHHHHHHHHHHHHTT--CCEEEEESSC
T ss_pred ceEEEECCCCCCHHHHHHHHHHHHHHCC--CeEEEEEeeC
Confidence 4688999999999999999999999999 9999995543
No 139
>2q5c_A NTRC family transcriptional regulator; structural genomics, protein structure initiative; HET: SO4 GOL; 1.49A {Clostridium acetobutylicum atcc 824}
Probab=32.23 E-value=33 Score=28.94 Aligned_cols=44 Identities=9% Similarity=0.040 Sum_probs=33.3
Q ss_pred HHHHHHHHhhhcCCCccEEEe-cCcHHHhhhCCCCeEEEecchhHH
Q 044031 94 SNVFQALENISLTSKILSFII-TSTTSFSYHPNIPTYTYFNSCAST 138 (468)
Q Consensus 94 ~~l~~ll~~~~~~~~pD~vI~-~~~~~vA~~lgIP~i~~~~~~~~~ 138 (468)
...+..++++.+ .+.|+||. ..+..+|+++|+|.+.+.+..-+.
T Consensus 129 ~e~~~~i~~l~~-~G~~vvVG~~~~~~~A~~~Gl~~vli~sg~eSI 173 (196)
T 2q5c_A 129 DEITTLISKVKT-ENIKIVVSGKTVTDEAIKQGLYGETINSGEESL 173 (196)
T ss_dssp GGHHHHHHHHHH-TTCCEEEECHHHHHHHHHTTCEEEECCCCHHHH
T ss_pred HHHHHHHHHHHH-CCCeEEECCHHHHHHHHHcCCcEEEEecCHHHH
Confidence 355566666544 38999999 778899999999999988755443
No 140
>3mc3_A DSRE/DSRF-like family protein; structural genomics, joint center for structural genomics, J protein structure initiative, PSI-2; HET: MLY MSE; 1.49A {Sulfolobus solfataricus}
Probab=32.07 E-value=52 Score=25.64 Aligned_cols=29 Identities=0% Similarity=-0.007 Sum_probs=24.4
Q ss_pred CccCHHHHHHHHHHHHhCCCCcEEEEEeCCC
Q 044031 12 AFHHMISMVELGKLILQHRSDVSITILVPSM 42 (468)
Q Consensus 12 ~~GHv~P~l~LA~~L~~~G~~h~Vt~~~~~~ 42 (468)
........+.+|...++.| |+|+++-...
T Consensus 28 ~~~~~~~al~lA~~A~a~g--~eV~vFf~~d 56 (134)
T 3mc3_A 28 DLDRTYAPLFMASISASME--YETSVFFMIX 56 (134)
T ss_dssp GTHHHHHHHHHHHHHHHTT--CEEEEEECTT
T ss_pred CHHHHHHHHHHHHHHHHCC--CCEEEEEEeC
Confidence 5678889999999999999 9999885443
No 141
>3r6d_A NAD-dependent epimerase/dehydratase; structural genomics, PSI-biology, midwest center for structu genomics, MCSG, veillo parvula; HET: MLZ; 1.25A {Veillonella parvula dsm 2008} PDB: 4hng_A 4hnh_A* 3r14_A*
Probab=31.99 E-value=46 Score=28.17 Aligned_cols=33 Identities=15% Similarity=0.000 Sum_probs=23.5
Q ss_pred ceEEEecCCCccCHHHHHHHHHHHH-hCCCCcEEEEEeC
Q 044031 3 KTIALYPGPAFHHMISMVELGKLIL-QHRSDVSITILVP 40 (468)
Q Consensus 3 ~~Iv~~~~~~~GHv~P~l~LA~~L~-~~G~~h~Vt~~~~ 40 (468)
++.++++ |+.|-+ ..+++++|+ ++| |+|+.+.-
T Consensus 5 mk~vlVt-Gasg~i--G~~~~~~l~~~~g--~~V~~~~r 38 (221)
T 3r6d_A 5 YXYITIL-GAAGQI--AQXLTATLLTYTD--MHITLYGR 38 (221)
T ss_dssp CSEEEEE-STTSHH--HHHHHHHHHHHCC--CEEEEEES
T ss_pred EEEEEEE-eCCcHH--HHHHHHHHHhcCC--ceEEEEec
Confidence 4545555 444544 578999999 899 99998854
No 142
>3mcu_A Dipicolinate synthase, B chain; NESG, structural genomics, PSI-2, protein structure initiative, northeast structural genomics consortium; 2.30A {Bacillus cereus}
Probab=31.67 E-value=41 Score=28.67 Aligned_cols=37 Identities=11% Similarity=0.072 Sum_probs=29.7
Q ss_pred ceEEEecCCCccCHHH-HHHHHHHHHhCCCCcEEEEEeCCC
Q 044031 3 KTIALYPGPAFHHMIS-MVELGKLILQHRSDVSITILVPSM 42 (468)
Q Consensus 3 ~~Iv~~~~~~~GHv~P-~l~LA~~L~~~G~~h~Vt~~~~~~ 42 (468)
+||++.-.|+ +..+- .+.|.+.|.++| ++|.++.+..
T Consensus 6 k~IllgiTGs-iaayk~~~~ll~~L~~~g--~eV~vv~T~~ 43 (207)
T 3mcu_A 6 KRIGFGFTGS-HCTYEEVMPHLEKLIAEG--AEVRPVVSYT 43 (207)
T ss_dssp CEEEEEECSC-GGGGTTSHHHHHHHHHTT--CEEEEEECC-
T ss_pred CEEEEEEECh-HHHHHHHHHHHHHHHhCC--CEEEEEEehH
Confidence 5788877776 55665 899999999999 9999997654
No 143
>2gt1_A Lipopolysaccharide heptosyltransferase-1; GT-B fold; 1.90A {Escherichia coli UTI89} PDB: 2h1f_A* 2h1h_A*
Probab=31.24 E-value=36 Score=31.05 Aligned_cols=39 Identities=5% Similarity=0.008 Sum_probs=35.3
Q ss_pred eEEEecCCCccCHHHHHHHHHHHHhCCCCcEEEEEeCCC
Q 044031 4 TIALYPGPAFHHMISMVELGKLILQHRSDVSITILVPSM 42 (468)
Q Consensus 4 ~Iv~~~~~~~GHv~P~l~LA~~L~~~G~~h~Vt~~~~~~ 42 (468)
+|+++-..+.|++.=...+.+.|+++-|+.+|++++...
T Consensus 2 ~ILii~~~~iGD~i~~~p~l~~Lk~~~P~a~I~~l~~~~ 40 (326)
T 2gt1_A 2 RVLIVKTSSMGDVLHTLPALTDAQQAIPGIKFDWVVEEG 40 (326)
T ss_dssp EEEEECCCCHHHHHHHHHHHHHHHHHSTTCEEEEEEEGG
T ss_pred eEEEEeccccchHHhHHHHHHHHHHhCCCCEEEEEEehh
Confidence 599999999999999999999999997789999997654
No 144
>3rft_A Uronate dehydrogenase; apoenzyme, rossmann fold, NAD binding, oxidoreductase; 1.90A {Agrobacterium tumefaciens} PDB: 3rfv_A* 3rfx_A*
Probab=30.94 E-value=78 Score=27.72 Aligned_cols=36 Identities=11% Similarity=-0.001 Sum_probs=26.8
Q ss_pred CcceEEEecCCCccCHHHHHHHHHHHHhCCCCcEEEEEeCC
Q 044031 1 MKKTIALYPGPAFHHMISMVELGKLILQHRSDVSITILVPS 41 (468)
Q Consensus 1 m~~~Iv~~~~~~~GHv~P~l~LA~~L~~~G~~h~Vt~~~~~ 41 (468)
|+++.++++.+ .|-+ ...|+++|+++| |+|+++.-.
T Consensus 1 m~~k~vlVTGa-sg~I--G~~la~~L~~~G--~~V~~~~r~ 36 (267)
T 3rft_A 1 MAMKRLLVTGA-AGQL--GRVMRERLAPMA--EILRLADLS 36 (267)
T ss_dssp CCEEEEEEEST-TSHH--HHHHHHHTGGGE--EEEEEEESS
T ss_pred CCCCEEEEECC-CCHH--HHHHHHHHHhcC--CEEEEEecC
Confidence 66677777744 4544 467899999999 999988543
No 145
>1q1v_A DEK protein; winged-helix motif, DNA binding protein; NMR {Homo sapiens} SCOP: a.159.4.1
Probab=30.87 E-value=87 Score=21.37 Aligned_cols=53 Identities=6% Similarity=0.035 Sum_probs=32.0
Q ss_pred ccccHHHHHHHHHHHhcCchhHHHHHHHHHHHHHHHHhh-cCCCCCCh-HHHHHHHHHH
Q 044031 409 GVVSAERVEERVRELMMGSEGKALRERSLEMRMMAATAW-NNNDGGSS-FTAFSNLFDL 465 (468)
Q Consensus 409 ~~~~~~~l~~av~~~l~~~~~~~~~~~a~~l~~~~~~a~-~~~~~g~~-~~~~~~~~~~ 465 (468)
+..|.++|.++|+++|...+...+.. +.+++.+.+.. . -+=+. ...+++.|+.
T Consensus 10 ~~Psd~ei~~~I~~IL~~aDL~tvT~--K~VR~~Le~~~pg--~dLs~kK~~I~~~I~~ 64 (70)
T 1q1v_A 10 KPPTDEELKETIKKLLASANLEEVTM--KQICKKVYENYPT--YDLTERKDFIKTTVKE 64 (70)
T ss_dssp CCCCHHHHHHHHHHHHTTSCGGGCCH--HHHHHHHHHHCSS--SCCSHHHHHHHHHHHH
T ss_pred CCcCHHHHHHHHHHHHHhCCHHHHhH--HHHHHHHHHHccC--CCChHHHHHHHHHHHH
Confidence 44899999999999998665433333 33555555555 3 33333 3445555544
No 146
>3imf_A Short chain dehydrogenase; structural genomics, infectious D center for structural genomics of infectious diseases, oxidoreductase, csgid; HET: MSE; 1.99A {Bacillus anthracis str}
Probab=30.86 E-value=51 Score=28.83 Aligned_cols=34 Identities=12% Similarity=0.130 Sum_probs=27.3
Q ss_pred CcceEEEecCCCccCHHHHHHHHHHHHhCCCCcEEEEEe
Q 044031 1 MKKTIALYPGPAFHHMISMVELGKLILQHRSDVSITILV 39 (468)
Q Consensus 1 m~~~Iv~~~~~~~GHv~P~l~LA~~L~~~G~~h~Vt~~~ 39 (468)
|+.++++++.++.| =..++|++|+++| ++|.++.
T Consensus 4 l~~k~vlVTGas~g---IG~aia~~l~~~G--~~V~~~~ 37 (257)
T 3imf_A 4 MKEKVVIITGGSSG---MGKGMATRFAKEG--ARVVITG 37 (257)
T ss_dssp TTTCEEEETTTTSH---HHHHHHHHHHHTT--CEEEEEE
T ss_pred CCCCEEEEECCCCH---HHHHHHHHHHHCC--CEEEEEe
Confidence 45678888877664 4678999999999 9998874
No 147
>3tqr_A Phosphoribosylglycinamide formyltransferase; purines, pyrimidines, nucleosides, nucleotides; HET: NHE; 1.97A {Coxiella burnetii} SCOP: c.65.1.0
Probab=30.81 E-value=2.3e+02 Score=24.09 Aligned_cols=84 Identities=11% Similarity=0.078 Sum_probs=45.3
Q ss_pred cceEEEecCCCccCHHHHHHHHHHHHh-CCCCcEEEEEeCCCCCCchhhhhhhhccccCCCCCeeEEEcCCCCCCCCCCC
Q 044031 2 KKTIALYPGPAFHHMISMVELGKLILQ-HRSDVSITILVPSMPLEESKTCSYINSISHRLNPIISFYYLPAIQMPSETLS 80 (468)
Q Consensus 2 ~~~Iv~~~~~~~GHv~P~l~LA~~L~~-~G~~h~Vt~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~i~~~~lp~~~~~ 80 (468)
++||+++..+....+.- |.+...+ .+ ++|..+.+..+.... . +.. ...+|.+..++...++ +
T Consensus 5 ~~riavl~SG~Gsnl~a---ll~~~~~~~~--~eI~~Vis~~~~a~~-~-~~A------~~~gIp~~~~~~~~~~----~ 67 (215)
T 3tqr_A 5 PLPIVVLISGNGTNLQA---IIGAIQKGLA--IEIRAVISNRADAYG-L-KRA------QQADIPTHIIPHEEFP----S 67 (215)
T ss_dssp CEEEEEEESSCCHHHHH---HHHHHHTTCS--EEEEEEEESCTTCHH-H-HHH------HHTTCCEEECCGGGSS----S
T ss_pred CcEEEEEEeCCcHHHHH---HHHHHHcCCC--CEEEEEEeCCcchHH-H-HHH------HHcCCCEEEeCccccC----c
Confidence 35788888776555444 4444444 35 999988765443211 0 111 2237777665533121 1
Q ss_pred hhHHHHHHHHHhhHHHHHHHHhhhcCCCccEEEe
Q 044031 81 RADIAIESIKLNSSNVFQALENISLTSKILSFII 114 (468)
Q Consensus 81 ~~~~~~~~~~~~~~~l~~ll~~~~~~~~pD~vI~ 114 (468)
.. ...+.+.+.++++ ++|++|+
T Consensus 68 r~--------~~d~~~~~~l~~~----~~Dliv~ 89 (215)
T 3tqr_A 68 RT--------DFESTLQKTIDHY----DPKLIVL 89 (215)
T ss_dssp HH--------HHHHHHHHHHHTT----CCSEEEE
T ss_pred hh--------HhHHHHHHHHHhc----CCCEEEE
Confidence 11 1123455666666 9999999
No 148
>4ds3_A Phosphoribosylglycinamide formyltransferase; structural genomics, seattle structural genomics center for infectious disease, ssgcid; 1.85A {Brucella melitensis BV}
Probab=30.66 E-value=2.5e+02 Score=23.79 Aligned_cols=86 Identities=9% Similarity=0.043 Sum_probs=46.2
Q ss_pred cceEEEecCCCccCHHHHHHHHHHHHhCCCCcEEEEEeCCCCCCchhhhhhhhccccCCCCCeeEEEcCCCCCCCCCCCh
Q 044031 2 KKTIALYPGPAFHHMISMVELGKLILQHRSDVSITILVPSMPLEESKTCSYINSISHRLNPIISFYYLPAIQMPSETLSR 81 (468)
Q Consensus 2 ~~~Iv~~~~~~~GHv~P~l~LA~~L~~~G~~h~Vt~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~i~~~~lp~~~~~~ 81 (468)
+++|+++..+....+ .+|.+.+.+.+-+++|..+.+..+..... ... ...+|.+..++...+ .+.
T Consensus 7 ~~ri~vl~SG~gsnl---~all~~~~~~~l~~~I~~Visn~~~a~~l--~~A------~~~gIp~~~~~~~~~----~~r 71 (209)
T 4ds3_A 7 RNRVVIFISGGGSNM---EALIRAAQAPGFPAEIVAVFSDKAEAGGL--AKA------EAAGIATQVFKRKDF----ASK 71 (209)
T ss_dssp CEEEEEEESSCCHHH---HHHHHHHTSTTCSEEEEEEEESCTTCTHH--HHH------HHTTCCEEECCGGGS----SSH
T ss_pred CccEEEEEECCcHHH---HHHHHHHHcCCCCcEEEEEEECCcccHHH--HHH------HHcCCCEEEeCcccc----CCH
Confidence 358988887765444 44555555432137888887654332110 111 223677665553211 111
Q ss_pred hHHHHHHHHHhhHHHHHHHHhhhcCCCccEEEe
Q 044031 82 ADIAIESIKLNSSNVFQALENISLTSKILSFII 114 (468)
Q Consensus 82 ~~~~~~~~~~~~~~l~~ll~~~~~~~~pD~vI~ 114 (468)
. ...+.+.+.++++ +||++|+
T Consensus 72 ~--------~~d~~~~~~l~~~----~~Dliv~ 92 (209)
T 4ds3_A 72 E--------AHEDAILAALDVL----KPDIICL 92 (209)
T ss_dssp H--------HHHHHHHHHHHHH----CCSEEEE
T ss_pred H--------HHHHHHHHHHHhc----CCCEEEE
Confidence 1 1123456667777 9999999
No 149
>2qx0_A 7,8-dihydro-6-hydroxymethylpterin- pyrophosphokinase; 3-layered alpha-BATA-alpha fold, homodimer, ternary complex, transferase; HET: APC PH2; 1.80A {Yersinia pestis}
Probab=30.45 E-value=59 Score=26.36 Aligned_cols=28 Identities=18% Similarity=0.243 Sum_probs=24.2
Q ss_pred eEEeccCCCcCCCHHHHHHHHHHHHhCC
Q 044031 272 VVFLCFGSRGTFSAPQLKEIAIGLERSN 299 (468)
Q Consensus 272 ~v~vs~GS~~~~~~~~~~~~~~al~~~~ 299 (468)
.+|+++||....+.+.+...+++|+..+
T Consensus 3 ~~~i~LGSNlGd~~~~l~~A~~~L~~~~ 30 (159)
T 2qx0_A 3 RVYIALGSNLAMPLQQVSAAREALAHLP 30 (159)
T ss_dssp EEEEEEEECSSSCHHHHHHHHHHHHTCT
T ss_pred EEEEEEeCchhhHHHHHHHHHHHHhcCC
Confidence 5899999998888888999999998754
No 150
>3kcq_A Phosphoribosylglycinamide formyltransferase; structural genomics, niaid, seattle structural center for infectious disease, ssgcid; 2.20A {Anaplasma phagocytophilum} SCOP: c.65.1.0
Probab=30.30 E-value=2.1e+02 Score=24.33 Aligned_cols=81 Identities=9% Similarity=0.045 Sum_probs=44.0
Q ss_pred cceEEEecCCCccCHHHHHHHHHHHHhCCCCcEEEEEeCCCCCCchhhhhhhhccccCCCCCeeEEEcCCCCCCCCCCCh
Q 044031 2 KKTIALYPGPAFHHMISMVELGKLILQHRSDVSITILVPSMPLEESKTCSYINSISHRLNPIISFYYLPAIQMPSETLSR 81 (468)
Q Consensus 2 ~~~Iv~~~~~~~GHv~P~l~LA~~L~~~G~~h~Vt~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~i~~~~lp~~~~~~ 81 (468)
++||+++..+.... +.+|.+.+.+.+-+++|..+.+..+.... . ... ...+|.+..++...+.
T Consensus 8 ~~ri~vl~SG~gsn---l~all~~~~~~~~~~~I~~Vis~~~~a~~-l-~~A------~~~gIp~~~~~~~~~~------ 70 (215)
T 3kcq_A 8 ELRVGVLISGRGSN---LEALAKAFSTEESSVVISCVISNNAEARG-L-LIA------QSYGIPTFVVKRKPLD------ 70 (215)
T ss_dssp CEEEEEEESSCCHH---HHHHHHHTCCC-CSEEEEEEEESCTTCTH-H-HHH------HHTTCCEEECCBTTBC------
T ss_pred CCEEEEEEECCcHH---HHHHHHHHHcCCCCcEEEEEEeCCcchHH-H-HHH------HHcCCCEEEeCcccCC------
Confidence 45888887766444 34455555443212788888765433211 0 111 2226776655432111
Q ss_pred hHHHHHHHHHhhHHHHHHHHhhhcCCCccEEEe
Q 044031 82 ADIAIESIKLNSSNVFQALENISLTSKILSFII 114 (468)
Q Consensus 82 ~~~~~~~~~~~~~~l~~ll~~~~~~~~pD~vI~ 114 (468)
.+.+.+.++++ ++|++|.
T Consensus 71 -----------~~~~~~~L~~~----~~Dlivl 88 (215)
T 3kcq_A 71 -----------IEHISTVLREH----DVDLVCL 88 (215)
T ss_dssp -----------HHHHHHHHHHT----TCSEEEE
T ss_pred -----------hHHHHHHHHHh----CCCEEEE
Confidence 03455666776 9999998
No 151
>2hy5_A Putative sulfurtransferase DSRE; DSRE, DSRF, sulfur, structural genomics, PSI, protein initiative, berkeley structural genomics center, BSGC, TRAN; 1.72A {Allochromatium vinosum} SCOP: c.114.1.1 PDB: 2hyb_A
Probab=30.28 E-value=61 Score=25.02 Aligned_cols=25 Identities=16% Similarity=0.141 Sum_probs=21.0
Q ss_pred cCHHHHHHHHHHHHhCCCCcEE-EEEeC
Q 044031 14 HHMISMVELGKLILQHRSDVSI-TILVP 40 (468)
Q Consensus 14 GHv~P~l~LA~~L~~~G~~h~V-t~~~~ 40 (468)
-.....+.+|..+.+.| |+| +++-.
T Consensus 15 ~~~~~al~~a~a~~~~g--~~v~~vff~ 40 (130)
T 2hy5_A 15 QASDSAYQFAKAALEKG--HEIFRVFFY 40 (130)
T ss_dssp THHHHHHHHHHHHHHTT--CEEEEEEEC
T ss_pred HHHHHHHHHHHHHHhcC--CeeCEEEEe
Confidence 45678899999999999 999 88743
No 152
>2r6j_A Eugenol synthase 1; phenylpropene, PIP reductase, short-chain dehydrogenase/reductase, plant protein; HET: NDP; 1.50A {Ocimum basilicum} PDB: 2qys_A 2qx7_A* 2qzz_A* 2r2g_A* 3c3x_A* 2qw8_A*
Probab=30.19 E-value=46 Score=30.05 Aligned_cols=34 Identities=9% Similarity=-0.011 Sum_probs=24.3
Q ss_pred ceEEEecCCCccCHHHHHHHHHHHHhCCCCcEEEEEeCCC
Q 044031 3 KTIALYPGPAFHHMISMVELGKLILQHRSDVSITILVPSM 42 (468)
Q Consensus 3 ~~Iv~~~~~~~GHv~P~l~LA~~L~~~G~~h~Vt~~~~~~ 42 (468)
++|+++ |+.|.+ ...|+++|.++| |+|+.++-..
T Consensus 12 ~~ilVt--GatG~i--G~~l~~~L~~~g--~~V~~l~R~~ 45 (318)
T 2r6j_A 12 SKILIF--GGTGYI--GNHMVKGSLKLG--HPTYVFTRPN 45 (318)
T ss_dssp CCEEEE--TTTSTT--HHHHHHHHHHTT--CCEEEEECTT
T ss_pred CeEEEE--CCCchH--HHHHHHHHHHCC--CcEEEEECCC
Confidence 355444 566665 567899999999 9999886543
No 153
>3kkj_A Amine oxidase, flavin-containing; oxidoreductase, PSR10, Q888A4, X-RAY, structure, PSI, protein structure initiative; HET: FAD; 2.50A {Pseudomonas syringae PV}
Probab=29.89 E-value=28 Score=30.04 Aligned_cols=31 Identities=10% Similarity=0.103 Sum_probs=25.1
Q ss_pred CcceEEEecCCCccCHHHHHHHHHHHHhCCCCcEEEEE
Q 044031 1 MKKTIALYPGPAFHHMISMVELGKLILQHRSDVSITIL 38 (468)
Q Consensus 1 m~~~Iv~~~~~~~GHv~P~l~LA~~L~~~G~~h~Vt~~ 38 (468)
|+..|+++-.|-.| +.+|..|+++| ++|+++
T Consensus 1 Mt~dV~IIGaGpaG-----L~aA~~La~~G--~~V~v~ 31 (336)
T 3kkj_A 1 MTVPIAIIGTGIAG-----LSAAQALTAAG--HQVHLF 31 (336)
T ss_dssp -CCCEEEECCSHHH-----HHHHHHHHHTT--CCEEEE
T ss_pred CCCCEEEECcCHHH-----HHHHHHHHHCC--CCEEEE
Confidence 66678888766444 89999999999 999999
No 154
>3gg2_A Sugar dehydrogenase, UDP-glucose/GDP-mannose dehydrogenase family; structural genomics, oxidoreductase, PSI-2; HET: UGA; 1.70A {Porphyromonas gingivalis}
Probab=29.73 E-value=34 Score=33.18 Aligned_cols=33 Identities=9% Similarity=-0.033 Sum_probs=26.2
Q ss_pred CcceEEEecCCCccCHHHHHHHHHHHHhCCCCcEEEEEeC
Q 044031 1 MKKTIALYPGPAFHHMISMVELGKLILQHRSDVSITILVP 40 (468)
Q Consensus 1 m~~~Iv~~~~~~~GHv~P~l~LA~~L~~~G~~h~Vt~~~~ 40 (468)
|+++|.++-.|..| +.+|..|+++| |+|+++..
T Consensus 1 M~mkI~VIG~G~vG-----~~lA~~La~~G--~~V~~~D~ 33 (450)
T 3gg2_A 1 MSLDIAVVGIGYVG-----LVSATCFAELG--ANVRCIDT 33 (450)
T ss_dssp -CCEEEEECCSHHH-----HHHHHHHHHTT--CEEEEECS
T ss_pred CCCEEEEECcCHHH-----HHHHHHHHhcC--CEEEEEEC
Confidence 77789999766555 57899999999 99999843
No 155
>3m2p_A UDP-N-acetylglucosamine 4-epimerase; SGXNY, 11155J, isomerase, structural genomics, PSI-2, protein structure initiative; HET: UDP; 2.95A {Bacillus cereus}
Probab=29.72 E-value=53 Score=29.53 Aligned_cols=35 Identities=20% Similarity=0.040 Sum_probs=25.1
Q ss_pred CcceEEEecCCCccCHHHHHHHHHHHHhCCCCcEEEEEeCC
Q 044031 1 MKKTIALYPGPAFHHMISMVELGKLILQHRSDVSITILVPS 41 (468)
Q Consensus 1 m~~~Iv~~~~~~~GHv~P~l~LA~~L~~~G~~h~Vt~~~~~ 41 (468)
|+++|++. |+.|-+ ...|+++|.++| |+|+.++-.
T Consensus 1 M~~~vlVt--GatG~i--G~~l~~~L~~~g--~~V~~~~r~ 35 (311)
T 3m2p_A 1 MSLKIAVT--GGTGFL--GQYVVESIKNDG--NTPIILTRS 35 (311)
T ss_dssp -CCEEEEE--TTTSHH--HHHHHHHHHHTT--CEEEEEESC
T ss_pred CCCEEEEE--CCCcHH--HHHHHHHHHhCC--CEEEEEeCC
Confidence 76776654 556644 457889999999 999998654
No 156
>4g6h_A Rotenone-insensitive NADH-ubiquinone oxidoreducta mitochondrial; rossmann fold, electron transfer, FAD, oxidoreductase; HET: FAD NAD; 2.26A {Saccharomyces cerevisiae} PDB: 4g6g_A* 4g73_A* 4g74_A* 4g9k_A* 4gap_A* 4gav_A*
Probab=29.67 E-value=25 Score=34.72 Aligned_cols=33 Identities=15% Similarity=0.189 Sum_probs=26.9
Q ss_pred cceEEEecCCCccCHHHHHHHHHHHHhCCCCcEEEEEeCC
Q 044031 2 KKTIALYPGPAFHHMISMVELGKLILQHRSDVSITILVPS 41 (468)
Q Consensus 2 ~~~Iv~~~~~~~GHv~P~l~LA~~L~~~G~~h~Vt~~~~~ 41 (468)
|+|||++-.+..| +.+|++|..++ ++||++...
T Consensus 42 KprVVIIGgG~AG-----l~~A~~L~~~~--~~VtLId~~ 74 (502)
T 4g6h_A 42 KPNVLILGSGWGA-----ISFLKHIDTKK--YNVSIISPR 74 (502)
T ss_dssp SCEEEEECSSHHH-----HHHHHHSCTTT--CEEEEEESS
T ss_pred CCCEEEECCcHHH-----HHHHHHhhhCC--CcEEEECCC
Confidence 5799999877655 67899999888 999999543
No 157
>2ab0_A YAJL; DJ-1/THIJ superfamily, alpha-beta hydrolase fold, unknown function; 1.10A {Escherichia coli} SCOP: c.23.16.2
Probab=29.64 E-value=90 Score=26.20 Aligned_cols=39 Identities=13% Similarity=0.132 Sum_probs=29.6
Q ss_pred CcceEEEecCCCccCHHHHHHHHHHHHhCCCCcEEEEEeCCC
Q 044031 1 MKKTIALYPGPAFHHMISMVELGKLILQHRSDVSITILVPSM 42 (468)
Q Consensus 1 m~~~Iv~~~~~~~GHv~P~l~LA~~L~~~G~~h~Vt~~~~~~ 42 (468)
|+++|+++.++.. ...-+....+.|.+.| ++|++++...
T Consensus 1 M~~kV~ill~~g~-~~~e~~~~~~~l~~ag--~~v~~vs~~~ 39 (205)
T 2ab0_A 1 MSASALVCLAPGS-EETEAVTTIDLLVRGG--IKVTTASVAS 39 (205)
T ss_dssp -CCEEEEEECTTC-CHHHHHHHHHHHHHTT--CEEEEEECSS
T ss_pred CCcEEEEEEcCCC-cHHHHHHHHHHHHHCC--CEEEEEeCCC
Confidence 7678888888755 3456667778899999 9999997654
No 158
>2i2c_A Probable inorganic polyphosphate/ATP-NAD kinase 1; NADP bound of lmnadk1, transferase; HET: DTA PG4; 1.85A {Listeria monocytogenes egd-e} PDB: 2i1w_A* 2i2a_A* 2i2b_A* 2i29_A* 2i2d_A* 2i2e_A* 3v7u_A* 3v7w_A* 3v7y_A* 3v80_A* 3v8m_A* 3v8n_A* 3v8p_A* 4dy6_A* 2i2f_A* 2q5f_A* 3v8q_A* 3v8r_A*
Probab=29.52 E-value=25 Score=31.51 Aligned_cols=28 Identities=11% Similarity=0.048 Sum_probs=24.2
Q ss_pred cceEEecCCcchHHHHHHh------CCcEEeccc
Q 044031 347 VGGFVTHCGWSSVVEAVTY------GVPMIAWPL 374 (468)
Q Consensus 347 ~~~~ithgG~~s~~eal~~------GvP~v~~P~ 374 (468)
++++|+=||=||+.+++.. ++|++++|.
T Consensus 36 ~D~vv~lGGDGT~l~aa~~~~~~~~~~PilGIn~ 69 (272)
T 2i2c_A 36 PEIVISIGGDGTFLSAFHQYEERLDEIAFIGIHT 69 (272)
T ss_dssp CSEEEEEESHHHHHHHHHHTGGGTTTCEEEEEES
T ss_pred CCEEEEEcCcHHHHHHHHHHhhcCCCCCEEEEeC
Confidence 3459999999999999875 899999986
No 159
>3fbs_A Oxidoreductase; structural genomics, PSI2, MCSG, protein STR initiative, midwest center for structural genomics; HET: FAD; 2.15A {Agrobacterium tumefaciens}
Probab=29.20 E-value=32 Score=30.56 Aligned_cols=32 Identities=16% Similarity=0.138 Sum_probs=26.4
Q ss_pred CcceEEEecCCCccCHHHHHHHHHHHHhCCCCcEEEEEe
Q 044031 1 MKKTIALYPGPAFHHMISMVELGKLILQHRSDVSITILV 39 (468)
Q Consensus 1 m~~~Iv~~~~~~~GHv~P~l~LA~~L~~~G~~h~Vt~~~ 39 (468)
|+.+|+++-.+..| +..|..|+++| ++|+++-
T Consensus 1 m~~~vvIIG~G~aG-----l~aA~~l~~~g--~~v~lie 32 (297)
T 3fbs_A 1 MKFDVIIIGGSYAG-----LSAALQLGRAR--KNILLVD 32 (297)
T ss_dssp CCEEEEEECCSHHH-----HHHHHHHHHTT--CCEEEEE
T ss_pred CCCCEEEECCCHHH-----HHHHHHHHhCC--CCEEEEe
Confidence 77788888766554 67899999999 9999994
No 160
>1f9y_A HPPK, protein (6-hydroxymethyl-7,8-dihydropterin pyrophosphokinase); pyrophosphoryl transfer, catalytic mechanism, folate, ternary complex; HET: APC HHR; 0.89A {Escherichia coli} PDB: 1eq0_A 1dy3_A* 1ex8_A* 1eqm_A* 1hka_A 1q0n_A* 1rao_A* 1rb0_A* 2f63_A 2f65_A 3h4a_A* 3ip0_A* 3ud5_A* 3ude_A* 3udv_A* 4f7v_A* 3kue_A 3hd2_A* 1f9h_A* 1g4c_A ...
Probab=29.20 E-value=54 Score=26.58 Aligned_cols=32 Identities=19% Similarity=0.229 Sum_probs=25.1
Q ss_pred eEEeccCCCcCCCHHHHHHHHHHHHhCC-CcEE
Q 044031 272 VVFLCFGSRGTFSAPQLKEIAIGLERSN-QRFL 303 (468)
Q Consensus 272 ~v~vs~GS~~~~~~~~~~~~~~al~~~~-~~~l 303 (468)
.+|+++||....+...+...+.+|+..+ ..++
T Consensus 2 ~~~i~LGSNlGd~~~~l~~A~~~L~~~~~~~~~ 34 (158)
T 1f9y_A 2 VAYIAIGSNLASPLEQVNAALKALGDIPESHIL 34 (158)
T ss_dssp EEEEEEEECSSCHHHHHHHHHHHHHTSTTEEEE
T ss_pred EEEEEEecCccCHHHHHHHHHHHHhcCCCCcee
Confidence 6899999998777778888889998753 4433
No 161
>3ip0_A 2-amino-4-hydroxy-6-hydroxymethyldihydropteridine pyrophosphokinase; alpha beta, ATP-binding, folate biosynthesis, nucleotide-binding; HET: APC HHR HHS; 0.89A {Escherichia coli} PDB: 1eq0_A 1dy3_A* 1ex8_A* 1hka_A 1eqm_A* 1rao_A* 1rb0_A* 2f63_A 2f65_A 1q0n_A* 3ud5_A* 3ude_A* 3udv_A* 4f7v_A* 3kue_A 3hd2_A* 1f9h_A* 1g4c_A 1kbr_A 1hq2_A* ...
Probab=29.13 E-value=54 Score=26.59 Aligned_cols=28 Identities=18% Similarity=0.192 Sum_probs=22.7
Q ss_pred eEEeccCCCcCCCHHHHHHHHHHHHhCC
Q 044031 272 VVFLCFGSRGTFSAPQLKEIAIGLERSN 299 (468)
Q Consensus 272 ~v~vs~GS~~~~~~~~~~~~~~al~~~~ 299 (468)
+.|+++||....+.+.+...+..|++..
T Consensus 2 iAyi~lGSNlGd~~~~l~~A~~~L~~~~ 29 (158)
T 3ip0_A 2 VAYIAIGSNLASPLEQVNAALKALGDIP 29 (158)
T ss_dssp EEEEEEEECSSCHHHHHHHHHHHHHTST
T ss_pred EEEEEEecchhhHHHHHHHHHHHHHcCC
Confidence 5799999998667777888888887753
No 162
>3afo_A NADH kinase POS5; alpha/beta+BETA sandwich, ATP-binding, mitochondrion NADP, nucleotide-binding, transferase, transit peptide; HET: NAI; 2.00A {Saccharomyces cerevisiae}
Probab=29.08 E-value=44 Score=31.66 Aligned_cols=34 Identities=26% Similarity=0.508 Sum_probs=25.6
Q ss_pred HhhhCccCcceEEecCCcchHHHHHHh----CC-cEEeccc
Q 044031 339 STILGHESVGGFVTHCGWSSVVEAVTY----GV-PMIAWPL 374 (468)
Q Consensus 339 ~~il~~~~~~~~ithgG~~s~~eal~~----Gv-P~v~~P~ 374 (468)
..+-..+++ +|+=||=||++.|+.. ++ |++++..
T Consensus 109 ~~~~~~~Dl--VIvlGGDGTlL~aa~~~~~~~vpPiLGIN~ 147 (388)
T 3afo_A 109 QDIVNRTDL--LVTLGGDGTILHGVSMFGNTQVPPVLAFAL 147 (388)
T ss_dssp HHHHHHCSE--EEEEESHHHHHHHHHTTTTSCCCCEEEEEC
T ss_pred hhcccCCCE--EEEEeCcHHHHHHHHHhcccCCCeEEEEEC
Confidence 343344555 9999999999999754 67 7999874
No 163
>3edm_A Short chain dehydrogenase; structural genomics, oxidoreductase, PSI-2, P structure initiative; 2.30A {Agrobacterium tumefaciens str}
Probab=28.97 E-value=97 Score=27.01 Aligned_cols=33 Identities=6% Similarity=-0.021 Sum_probs=26.2
Q ss_pred ceEEEecCCCccCHHHHHHHHHHHHhCCCCcEEEEEeC
Q 044031 3 KTIALYPGPAFHHMISMVELGKLILQHRSDVSITILVP 40 (468)
Q Consensus 3 ~~Iv~~~~~~~GHv~P~l~LA~~L~~~G~~h~Vt~~~~ 40 (468)
.++++++.++.| =..++|++|+++| ++|.++..
T Consensus 8 ~k~vlVTGas~G---IG~aia~~la~~G--~~V~~~~~ 40 (259)
T 3edm_A 8 NRTIVVAGAGRD---IGRACAIRFAQEG--ANVVLTYN 40 (259)
T ss_dssp TCEEEEETTTSH---HHHHHHHHHHHTT--CEEEEEEC
T ss_pred CCEEEEECCCch---HHHHHHHHHHHCC--CEEEEEcC
Confidence 468888877664 3578999999999 99988743
No 164
>3sc6_A DTDP-4-dehydrorhamnose reductase; RFBD, structural genomics, infectious diseases, bacillus anthracis STR. AMES, rhamnose biosynthetic pathway; HET: NAP; 2.65A {Bacillus anthracis} SCOP: c.2.1.0
Probab=28.92 E-value=30 Score=30.77 Aligned_cols=33 Identities=15% Similarity=0.086 Sum_probs=23.7
Q ss_pred CcceEEEecCCCccCHHHHHHHHHHHHhCCCCcEEEEEe
Q 044031 1 MKKTIALYPGPAFHHMISMVELGKLILQHRSDVSITILV 39 (468)
Q Consensus 1 m~~~Iv~~~~~~~GHv~P~l~LA~~L~~~G~~h~Vt~~~ 39 (468)
|+++|++. |+.|.+ ...|+++|.++| |+|+.++
T Consensus 4 M~m~ilVt--GatG~i--G~~l~~~L~~~g--~~V~~~~ 36 (287)
T 3sc6_A 4 MKERVIIT--GANGQL--GKQLQEELNPEE--YDIYPFD 36 (287)
T ss_dssp -CEEEEEE--STTSHH--HHHHHHHSCTTT--EEEEEEC
T ss_pred ceeEEEEE--CCCCHH--HHHHHHHHHhCC--CEEEEec
Confidence 55566554 566654 557889999999 9999984
No 165
>1g3q_A MIND ATPase, cell division inhibitor; alpha-beta-alpha layered, protein-ADP complex, cell cycle, hydrolase; HET: ADP; 2.00A {Pyrococcus furiosus} SCOP: c.37.1.10 PDB: 1g3r_A* 1ion_A*
Probab=28.59 E-value=71 Score=27.21 Aligned_cols=40 Identities=10% Similarity=0.113 Sum_probs=31.5
Q ss_pred CcceEEEecC-CCccCHHHHHHHHHHHHhCCCCcEEEEEeCCC
Q 044031 1 MKKTIALYPG-PAFHHMISMVELGKLILQHRSDVSITILVPSM 42 (468)
Q Consensus 1 m~~~Iv~~~~-~~~GHv~P~l~LA~~L~~~G~~h~Vt~~~~~~ 42 (468)
|.+.|+++.. ++-|-..-.+.||..|+++| ++|.++-.+.
T Consensus 1 M~~~i~v~s~kgGvGKTt~a~~LA~~la~~g--~~VlliD~D~ 41 (237)
T 1g3q_A 1 MGRIISIVSGKGGTGKTTVTANLSVALGDRG--RKVLAVDGDL 41 (237)
T ss_dssp CCEEEEEECSSTTSSHHHHHHHHHHHHHHTT--CCEEEEECCT
T ss_pred CceEEEEecCCCCCCHHHHHHHHHHHHHhcC--CeEEEEeCCC
Confidence 6444555543 68899999999999999999 9999995543
No 166
>2x5n_A SPRPN10, 26S proteasome regulatory subunit RPN10; nuclear protein, nucleus, ubiquitin; 1.30A {Schizosaccharomyces pombe}
Probab=28.52 E-value=1.8e+02 Score=24.05 Aligned_cols=64 Identities=17% Similarity=0.251 Sum_probs=37.0
Q ss_pred EEEecCCCccCHHHHHHHHHHHHhCCCCcEEEEEeCCCCCCchhhhhhhhccccCCCCCeeEEEcCCC
Q 044031 5 IALYPGPAFHHMISMVELGKLILQHRSDVSITILVPSMPLEESKTCSYINSISHRLNPIISFYYLPAI 72 (468)
Q Consensus 5 Iv~~~~~~~GHv~P~l~LA~~L~~~G~~h~Vt~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~i~~~ 72 (468)
|+++..+...+-.....+++.|++.| ++|.++...............+... ...+-.++.+|..
T Consensus 110 iil~~~~~~~~~~~~~~~a~~lk~~g--i~v~~Ig~G~~~~~~~l~~la~~~n--~~~~s~~~~~~~~ 173 (192)
T 2x5n_A 110 VAFVGSPIVEDEKNLIRLAKRMKKNN--VAIDIIHIGELQNESALQHFIDAAN--SSDSCHLVSIPPS 173 (192)
T ss_dssp EEEECSCCSSCHHHHHHHHHHHHHTT--EEEEEEEESCC---CHHHHHHHHHC--STTCCEEEEECCC
T ss_pred EEEEECCCCCCchhHHHHHHHHHHCC--CEEEEEEeCCCCccHHHHHHHHhcc--CCCceEEEEecCc
Confidence 44555555567778889999999999 9998886654332111222222211 1235566666655
No 167
>3ef6_A Toluene 1,2-dioxygenase system ferredoxin--NAD(+) reductase; FAD binding protein, NADH binding protein, aromatic hydrocar catabolism, FAD; HET: FAD; 1.80A {Pseudomonas putida} PDB: 4emi_A* 4emj_A*
Probab=28.40 E-value=37 Score=32.31 Aligned_cols=37 Identities=8% Similarity=0.026 Sum_probs=27.2
Q ss_pred CcceEEEecCCCccCHHHHHHHHHHHHhCCCCcEEEEEeCCC
Q 044031 1 MKKTIALYPGPAFHHMISMVELGKLILQHRSDVSITILVPSM 42 (468)
Q Consensus 1 m~~~Iv~~~~~~~GHv~P~l~LA~~L~~~G~~h~Vt~~~~~~ 42 (468)
|+++|+++-.+..| +..|..|+++|.+.+||++....
T Consensus 1 M~~~vvIIGaG~AG-----l~aA~~L~~~g~~~~V~li~~~~ 37 (410)
T 3ef6_A 1 MATHVAIIGNGVGG-----FTTAQALRAEGFEGRISLIGDEP 37 (410)
T ss_dssp --CEEEEECCSHHH-----HHHHHHHHHTTCCSEEEEEECSS
T ss_pred CCCCEEEEcccHHH-----HHHHHHHHccCcCCeEEEEECCC
Confidence 77799999877665 78899999999434499996543
No 168
>3llv_A Exopolyphosphatase-related protein; NAD(P)-binding, rossmann, PSI, M structural genomics; 1.70A {Archaeoglobus fulgidus}
Probab=28.39 E-value=33 Score=26.69 Aligned_cols=31 Identities=6% Similarity=-0.083 Sum_probs=23.9
Q ss_pred ceEEEecCCCccCHHHHHHHHHHHHhCCCCcEEEEEeC
Q 044031 3 KTIALYPGPAFHHMISMVELGKLILQHRSDVSITILVP 40 (468)
Q Consensus 3 ~~Iv~~~~~~~GHv~P~l~LA~~L~~~G~~h~Vt~~~~ 40 (468)
+||+++-. |.+ ...+|+.|.++| |+|+++..
T Consensus 7 ~~v~I~G~---G~i--G~~la~~L~~~g--~~V~~id~ 37 (141)
T 3llv_A 7 YEYIVIGS---EAA--GVGLVRELTAAG--KKVLAVDK 37 (141)
T ss_dssp CSEEEECC---SHH--HHHHHHHHHHTT--CCEEEEES
T ss_pred CEEEEECC---CHH--HHHHHHHHHHCC--CeEEEEEC
Confidence 47887764 443 568999999999 99999843
No 169
>1vpd_A Tartronate semialdehyde reductase; structural genomics, MCSG, protein structure initiative, PSI, midwest center for structural genomics; HET: MSE TLA; 1.65A {Salmonella typhimurium} SCOP: a.100.1.1 c.2.1.6
Probab=28.09 E-value=53 Score=29.43 Aligned_cols=31 Identities=13% Similarity=0.160 Sum_probs=24.2
Q ss_pred CcceEEEecCCCccCHHHHHHHHHHHHhCCCCcEEEEE
Q 044031 1 MKKTIALYPGPAFHHMISMVELGKLILQHRSDVSITIL 38 (468)
Q Consensus 1 m~~~Iv~~~~~~~GHv~P~l~LA~~L~~~G~~h~Vt~~ 38 (468)
|+++|.++-.|..|. .+|+.|++.| |+|+++
T Consensus 4 M~m~i~iiG~G~~G~-----~~a~~l~~~g--~~V~~~ 34 (299)
T 1vpd_A 4 MTMKVGFIGLGIMGK-----PMSKNLLKAG--YSLVVS 34 (299)
T ss_dssp --CEEEEECCSTTHH-----HHHHHHHHTT--CEEEEE
T ss_pred ccceEEEECchHHHH-----HHHHHHHhCC--CEEEEE
Confidence 667899998777775 4688899999 999887
No 170
>1mxh_A Pteridine reductase 2; SDR topology, protein-substrate complex, oxidoreductase; HET: NAP DHF; 2.20A {Trypanosoma cruzi} SCOP: c.2.1.2 PDB: 1mxf_A*
Probab=27.78 E-value=57 Score=28.78 Aligned_cols=34 Identities=12% Similarity=0.045 Sum_probs=25.8
Q ss_pred cceEEEecCCCccCHHHHHHHHHHHHhCCCCcEEEEEeC
Q 044031 2 KKTIALYPGPAFHHMISMVELGKLILQHRSDVSITILVP 40 (468)
Q Consensus 2 ~~~Iv~~~~~~~GHv~P~l~LA~~L~~~G~~h~Vt~~~~ 40 (468)
+.++++++.++.| =..++|++|+++| ++|+++.-
T Consensus 10 ~~k~~lVTGas~g---IG~~ia~~l~~~G--~~V~~~~r 43 (276)
T 1mxh_A 10 ECPAAVITGGARR---IGHSIAVRLHQQG--FRVVVHYR 43 (276)
T ss_dssp -CCEEEETTCSSH---HHHHHHHHHHHTT--CEEEEEES
T ss_pred CCCEEEEeCCCcH---HHHHHHHHHHHCC--CEEEEEeC
Confidence 3467888866654 4678999999999 99998843
No 171
>2d1p_B TUSC, hypothetical UPF0116 protein YHEM; tRNA modification, sulfur transfer, structural genomics, translation; 2.15A {Escherichia coli} SCOP: c.114.1.1
Probab=27.77 E-value=92 Score=23.54 Aligned_cols=38 Identities=5% Similarity=-0.004 Sum_probs=28.7
Q ss_pred CcceEEEecCCCccCH--HHHHHHHHHHHhCCCCcEEEEEeC
Q 044031 1 MKKTIALYPGPAFHHM--ISMVELGKLILQHRSDVSITILVP 40 (468)
Q Consensus 1 m~~~Iv~~~~~~~GHv--~P~l~LA~~L~~~G~~h~Vt~~~~ 40 (468)
||.-+.++..+-.|+- .=.+.+|..+...| |+|.++-.
T Consensus 1 Mkk~~~vv~~~P~g~~~~~~al~~a~a~~a~~--~~v~vff~ 40 (119)
T 2d1p_B 1 MKRIAFVFSTAPHGTAAGREGLDALLATSALT--DDLAVFFI 40 (119)
T ss_dssp CCCEEEEECSCTTTSTHHHHHHHHHHHHHTTC--SCEEEEEC
T ss_pred CcEEEEEEcCCCCCcHHHHHHHHHHHHHHhCC--CCEEEEEe
Confidence 7655666666666766 66788999999999 88888843
No 172
>2r8r_A Sensor protein; KDPD, PFAM02702, MCSG, structural genomics, protein structure initiative, midwest center for structural genomics, kinase; 2.30A {Pseudomonas syringae PV}
Probab=27.72 E-value=78 Score=27.38 Aligned_cols=39 Identities=15% Similarity=0.153 Sum_probs=34.2
Q ss_pred ceEEEecCCCccCHHHHHHHHHHHHhCCCCcEEEEEeCCCC
Q 044031 3 KTIALYPGPAFHHMISMVELGKLILQHRSDVSITILVPSMP 43 (468)
Q Consensus 3 ~~Iv~~~~~~~GHv~P~l~LA~~L~~~G~~h~Vt~~~~~~~ 43 (468)
..|++..-|+-|-..=++.+|..|+++| ++|.++..++.
T Consensus 7 l~I~~~~kgGvGKTt~a~~la~~l~~~G--~~V~v~d~D~q 45 (228)
T 2r8r_A 7 LKVFLGAAPGVGKTYAMLQAAHAQLRQG--VRVMAGVVETH 45 (228)
T ss_dssp EEEEEESSTTSSHHHHHHHHHHHHHHTT--CCEEEEECCCT
T ss_pred EEEEEECCCCCcHHHHHHHHHHHHHHCC--CCEEEEEeCCC
Confidence 4678888899999999999999999999 99988876653
No 173
>4hb9_A Similarities with probable monooxygenase; flavin, structural genomics, NEW YORK structural genomics RE consortium, nysgrc, PSI; HET: MSE FAD; 1.93A {Photorhabdus luminescens}
Probab=27.71 E-value=39 Score=31.70 Aligned_cols=29 Identities=14% Similarity=0.134 Sum_probs=24.9
Q ss_pred ceEEEecCCCccCHHHHHHHHHHHHhCCCCcEEEEE
Q 044031 3 KTIALYPGPAFHHMISMVELGKLILQHRSDVSITIL 38 (468)
Q Consensus 3 ~~Iv~~~~~~~GHv~P~l~LA~~L~~~G~~h~Vt~~ 38 (468)
+||+|+-.|-.| +.+|..|+++| ++|+++
T Consensus 2 m~V~IVGaGpaG-----l~~A~~L~~~G--~~v~v~ 30 (412)
T 4hb9_A 2 MHVGIIGAGIGG-----TCLAHGLRKHG--IKVTIY 30 (412)
T ss_dssp CEEEEECCSHHH-----HHHHHHHHHTT--CEEEEE
T ss_pred CEEEEECcCHHH-----HHHHHHHHhCC--CCEEEE
Confidence 569998777555 88999999999 999999
No 174
>3ijr_A Oxidoreductase, short chain dehydrogenase/reducta; structural genomics, infectious D center for structural genomics of infectious diseases; HET: NAD; 2.05A {Bacillus anthracis str} PDB: 3i3o_A*
Probab=27.41 E-value=89 Score=27.88 Aligned_cols=34 Identities=15% Similarity=0.009 Sum_probs=26.7
Q ss_pred cceEEEecCCCccCHHHHHHHHHHHHhCCCCcEEEEEeC
Q 044031 2 KKTIALYPGPAFHHMISMVELGKLILQHRSDVSITILVP 40 (468)
Q Consensus 2 ~~~Iv~~~~~~~GHv~P~l~LA~~L~~~G~~h~Vt~~~~ 40 (468)
+.++++++.++.| =..++|++|+++| ++|.++.-
T Consensus 46 ~gk~vlVTGas~G---IG~aia~~la~~G--~~V~~~~r 79 (291)
T 3ijr_A 46 KGKNVLITGGDSG---IGRAVSIAFAKEG--ANIAIAYL 79 (291)
T ss_dssp TTCEEEEETTTSH---HHHHHHHHHHHTT--CEEEEEES
T ss_pred CCCEEEEeCCCcH---HHHHHHHHHHHCC--CEEEEEeC
Confidence 3468888876654 4678999999999 99988854
No 175
>4iin_A 3-ketoacyl-acyl carrier protein reductase (FABG); structural genomics, center for structural genomics of infec diseases, csgid; HET: NAD; 2.40A {Helicobacter pylori} PDB: 4ijk_A
Probab=27.11 E-value=92 Score=27.33 Aligned_cols=33 Identities=15% Similarity=0.069 Sum_probs=26.2
Q ss_pred ceEEEecCCCccCHHHHHHHHHHHHhCCCCcEEEEEeC
Q 044031 3 KTIALYPGPAFHHMISMVELGKLILQHRSDVSITILVP 40 (468)
Q Consensus 3 ~~Iv~~~~~~~GHv~P~l~LA~~L~~~G~~h~Vt~~~~ 40 (468)
.++++++.++.| =..++|++|+++| ++|.++.-
T Consensus 29 ~k~vlITGas~g---IG~~la~~l~~~G--~~V~~~~r 61 (271)
T 4iin_A 29 GKNVLITGASKG---IGAEIAKTLASMG--LKVWINYR 61 (271)
T ss_dssp CCEEEETTCSSH---HHHHHHHHHHHTT--CEEEEEES
T ss_pred CCEEEEECCCcH---HHHHHHHHHHHCC--CEEEEEeC
Confidence 467888876654 4678999999999 99988854
No 176
>3oow_A Phosphoribosylaminoimidazole carboxylase,catalyic; structural genomics, center for structural genomics of infec diseases, csgid; HET: MSE; 1.75A {Francisella tularensis subsp} SCOP: c.23.8.1 PDB: 3opq_A*
Probab=27.11 E-value=1.4e+02 Score=24.32 Aligned_cols=37 Identities=8% Similarity=0.037 Sum_probs=29.0
Q ss_pred CcceEEEecCCCccCHHHHHHHHHHHHhCCCCcEEEEE
Q 044031 1 MKKTIALYPGPAFHHMISMVELGKLILQHRSDVSITIL 38 (468)
Q Consensus 1 m~~~Iv~~~~~~~GHv~P~l~LA~~L~~~G~~h~Vt~~ 38 (468)
|+++|+++. ++.+|+--+-..++.|.+-|=.++|.++
T Consensus 4 m~p~V~Iim-gS~SD~~v~~~a~~~l~~~gi~~ev~V~ 40 (166)
T 3oow_A 4 MSVQVGVIM-GSKSDWSTMKECCDILDNLGIGYECEVV 40 (166)
T ss_dssp -CEEEEEEE-SSGGGHHHHHHHHHHHHHTTCEEEEEEC
T ss_pred CCCeEEEEE-CcHHhHHHHHHHHHHHHHcCCCEEEEEE
Confidence 667777776 8999999999999999998844666666
No 177
>1fy2_A Aspartyl dipeptidase; serine protease, catalytic triad, strand-helix MO hydrolase; 1.20A {Salmonella typhimurium} SCOP: c.23.16.4 PDB: 1fye_A
Probab=27.07 E-value=2e+02 Score=24.56 Aligned_cols=46 Identities=15% Similarity=-0.017 Sum_probs=31.5
Q ss_pred cchhHHhhcCCCCCceEEeccCCCcCCCHHHHHHHHHHHHhCCCcEEE
Q 044031 257 SSDCLTWLDSQPSGSVVFLCFGSRGTFSAPQLKEIAIGLERSNQRFLW 304 (468)
Q Consensus 257 ~~~l~~~l~~~~~~~~v~vs~GS~~~~~~~~~~~~~~al~~~~~~~l~ 304 (468)
.+.+.+|+... ..+++|..|+........+..+.++|++.|..+..
T Consensus 21 ~~~l~~~~~~~--~~i~iI~~a~~~~~~~~~~~~~~~al~~lG~~~~~ 66 (229)
T 1fy2_A 21 LPLIANQLNGR--RSAVFIPFAGVTQTWDEYTDKTAEVLAPLGVNVTG 66 (229)
T ss_dssp HHHHHHHHTTC--CEEEEECTTCCSSCHHHHHHHHHHHHGGGTCEEEE
T ss_pred HHHHHHHhcCC--CeEEEEECCCCCCCHHHHHHHHHHHHHHCCCEEEE
Confidence 44466777643 34999999875433445567789999999877543
No 178
>4eg0_A D-alanine--D-alanine ligase; structural genomics, seattle structural genomics center for infectious disease, ssgcid; 1.65A {Burkholderia ambifaria} PDB: 4egq_A 4egj_A
Probab=27.01 E-value=64 Score=29.24 Aligned_cols=37 Identities=8% Similarity=-0.098 Sum_probs=29.1
Q ss_pred CcceEEEecCCCcc-C---HHHHHHHHHHHHhCCCCcEEEEEe
Q 044031 1 MKKTIALYPGPAFH-H---MISMVELGKLILQHRSDVSITILV 39 (468)
Q Consensus 1 m~~~Iv~~~~~~~G-H---v~P~l~LA~~L~~~G~~h~Vt~~~ 39 (468)
|+++|+++..+... | +.-...+++.|.+.| |+|..+.
T Consensus 12 ~~~~v~vl~gg~s~E~~vsl~s~~~v~~al~~~g--~~v~~i~ 52 (317)
T 4eg0_A 12 RFGKVAVLFGGESAEREVSLTSGRLVLQGLRDAG--IDAHPFD 52 (317)
T ss_dssp GGCEEEEECCCSSTTHHHHHHHHHHHHHHHHHTT--CEEEEEC
T ss_pred hcceEEEEECCCCCcceeeHHHHHHHHHHHHHCC--CEEEEEe
Confidence 56789888865333 2 457889999999999 9999994
No 179
>1jkx_A GART;, phosphoribosylglycinamide formyltransferase; purine biosynthesis, anti-cancer agent; HET: 138; 1.60A {Escherichia coli} SCOP: c.65.1.1 PDB: 1cdd_A 1cde_A* 1c2t_A* 1grc_A 1gar_A* 2gar_A 3gar_A 1c3e_A*
Probab=26.99 E-value=2.9e+02 Score=23.37 Aligned_cols=103 Identities=8% Similarity=-0.014 Sum_probs=0.0
Q ss_pred ceEEEecCCCccCHHHHHHHHHHHHhC--CCCcEEEEEeCCCCCCchhhhhhhhccccCCCCCeeEEEcCCCCCCCCCCC
Q 044031 3 KTIALYPGPAFHHMISMVELGKLILQH--RSDVSITILVPSMPLEESKTCSYINSISHRLNPIISFYYLPAIQMPSETLS 80 (468)
Q Consensus 3 ~~Iv~~~~~~~GHv~P~l~LA~~L~~~--G~~h~Vt~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~i~~~~lp~~~~~ 80 (468)
++|+++..+..+. +-+|.+.+.+. + |+|..+.+..+.. .....+ ...+|.+..++...+...
T Consensus 1 ~ri~vl~Sg~gsn---l~ali~~~~~~~~~--~~i~~Vis~~~~~------~~~~~A--~~~gIp~~~~~~~~~~~r--- 64 (212)
T 1jkx_A 1 MNIVVLISGNGSN---LQAIIDACKTNKIK--GTVRAVFSNKADA------FGLERA--RQAGIATHTLIASAFDSR--- 64 (212)
T ss_dssp CEEEEEESSCCHH---HHHHHHHHHTTSSS--SEEEEEEESCTTC------HHHHHH--HHTTCEEEECCGGGCSSH---
T ss_pred CEEEEEEECCcHH---HHHHHHHHHcCCCC--ceEEEEEeCCCch------HHHHHH--HHcCCcEEEeCcccccch---
Q ss_pred hhHHHHHHHHHhhHHHHHHHHhhhcCCCccEEEe-----cCcHHHhhhCCCCeEEEecc
Q 044031 81 RADIAIESIKLNSSNVFQALENISLTSKILSFII-----TSTTSFSYHPNIPTYTYFNS 134 (468)
Q Consensus 81 ~~~~~~~~~~~~~~~l~~ll~~~~~~~~pD~vI~-----~~~~~vA~~lgIP~i~~~~~ 134 (468)
....+.+.+.++++ +||++|+ .-...+-+.....++-++++
T Consensus 65 ---------~~~~~~~~~~l~~~----~~Dliv~agy~~il~~~~l~~~~~~~iNiHpS 110 (212)
T 1jkx_A 65 ---------EAYDRELIHEIDMY----APDVVVLAGFMRILSPAFVSHYAGRLLNIHPS 110 (212)
T ss_dssp ---------HHHHHHHHHHHGGG----CCSEEEESSCCSCCCHHHHHHTTTSEEEEESS
T ss_pred ---------hhccHHHHHHHHhc----CCCEEEEeChhhhCCHHHHhhccCCEEEEccC
No 180
>1cbk_A Protein (7,8-dihydro-6-hydroxymethylpterin- pyrophosphokinase); transferase; HET: ROI; 2.02A {Haemophilus influenzae} SCOP: d.58.30.1
Probab=26.91 E-value=58 Score=26.45 Aligned_cols=28 Identities=14% Similarity=0.246 Sum_probs=23.4
Q ss_pred eEEeccCCCcCCCHHHHHHHHHHHHhCC
Q 044031 272 VVFLCFGSRGTFSAPQLKEIAIGLERSN 299 (468)
Q Consensus 272 ~v~vs~GS~~~~~~~~~~~~~~al~~~~ 299 (468)
.+|+++||....+.+.+...+++|+..+
T Consensus 3 ~~~i~LGSNlGd~~~~l~~A~~~L~~~~ 30 (160)
T 1cbk_A 3 TAYIALGSNLNTPVEQLHAALKAISQLS 30 (160)
T ss_dssp EEEEEEEECSSCHHHHHHHHHHHHHTST
T ss_pred EEEEEEeccchHHHHHHHHHHHHHhhCC
Confidence 5899999998777788888889998753
No 181
>4e08_A DJ-1 beta; flavodoxin-like fold, stress response, motor protein; 2.00A {Drosophila melanogaster}
Probab=26.87 E-value=1.2e+02 Score=25.01 Aligned_cols=39 Identities=10% Similarity=0.170 Sum_probs=30.0
Q ss_pred CcceEEEecCCCccCHHHHHHHHHHHHhCCCCcEEEEEeCCC
Q 044031 1 MKKTIALYPGPAFHHMISMVELGKLILQHRSDVSITILVPSM 42 (468)
Q Consensus 1 m~~~Iv~~~~~~~GHv~P~l~LA~~L~~~G~~h~Vt~~~~~~ 42 (468)
|+++|+++-.+.. ...=+....+.|.+.| ++|++++...
T Consensus 4 m~kkv~ill~~g~-~~~e~~~~~~~l~~ag--~~v~~~s~~~ 42 (190)
T 4e08_A 4 MSKSALVILAPGA-EEMEFIIAADVLRRAG--IKVTVAGLNG 42 (190)
T ss_dssp CCCEEEEEECTTC-CHHHHHHHHHHHHHTT--CEEEEEESSS
T ss_pred CCcEEEEEECCCc-hHHHHHHHHHHHHHCC--CEEEEEECCC
Confidence 7778888887655 3455666778999999 9999997654
No 182
>1kyq_A Met8P, siroheme biosynthesis protein Met8; homodimer, oxidoreductase, lyase; HET: NAD; 2.20A {Saccharomyces cerevisiae} SCOP: c.2.1.11 e.37.1.1
Probab=26.73 E-value=1.5e+02 Score=26.47 Aligned_cols=37 Identities=14% Similarity=-0.031 Sum_probs=26.5
Q ss_pred cHHHHHHHHHHHh---cCchhHHHHHHHHHHHHHHHHhhc
Q 044031 412 SAERVEERVRELM---MGSEGKALRERSLEMRMMAATAWN 448 (468)
Q Consensus 412 ~~~~l~~av~~~l---~~~~~~~~~~~a~~l~~~~~~a~~ 448 (468)
-+..|++.|+..+ .+++...+-+.+.++++.+++...
T Consensus 173 lA~~ir~~ie~~l~~~p~~~~~~~~~~l~~~R~~ik~~~~ 212 (274)
T 1kyq_A 173 FGALVRDEIRNLFTQMGDLALEDAVVKLGELRRGIRLLAP 212 (274)
T ss_dssp HHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHSC
T ss_pred HHHHHHHHHHHHHhcCCchhHHHHHHHHHHHHHHHHhhCC
Confidence 4467888888888 544444677888888888887654
No 183
>1qkk_A DCTD, C4-dicarboxylate transport transcriptional regulatory protein; receiver domain, 2-component signal transduction; 1.7A {Sinorhizobium meliloti} SCOP: c.23.1.1 PDB: 1l5z_A 1l5y_A
Probab=26.65 E-value=1.7e+02 Score=22.47 Aligned_cols=49 Identities=16% Similarity=0.071 Sum_probs=31.6
Q ss_pred hCCcEEecccccchhhHHHHHHhhcceeeeeccCCcccccCCCCccccHHHHHHHHHHHhcCc
Q 044031 365 YGVPMIAWPLYAEQFLNSVALVQEMKVAMPMFLNGEEETIGNGEGVVSAERVEERVRELMMGS 427 (468)
Q Consensus 365 ~GvP~v~~P~~~DQ~~na~~~~~~~g~g~~~~~~~~~~~~~~~~~~~~~~~l~~av~~~l~~~ 427 (468)
..+|+|++--..+.......+ +. |+--.+.+ . ++.++|..+|+.++...
T Consensus 74 ~~~pii~ls~~~~~~~~~~~~-~~-g~~~~l~k---------P---~~~~~L~~~i~~~~~~~ 122 (155)
T 1qkk_A 74 PDLPMILVTGHGDIPMAVQAI-QD-GAYDFIAK---------P---FAADRLVQSARRAEEKR 122 (155)
T ss_dssp TTSCEEEEECGGGHHHHHHHH-HT-TCCEEEES---------S---CCHHHHHHHHHHHHHHH
T ss_pred CCCCEEEEECCCChHHHHHHH-hc-CCCeEEeC---------C---CCHHHHHHHHHHHHHHH
Confidence 478888886544433333333 33 66544542 2 89999999999998654
No 184
>1u7z_A Coenzyme A biosynthesis bifunctional protein coabc; ligase; HET: PMT; 2.30A {Escherichia coli} SCOP: c.72.3.1 PDB: 1u7w_A* 1u7u_A* 1u80_A*
Probab=26.64 E-value=83 Score=27.18 Aligned_cols=24 Identities=4% Similarity=0.016 Sum_probs=19.5
Q ss_pred ccCHHHHHHHHHHHHhCCCCcEEEEEeC
Q 044031 13 FHHMISMVELGKLILQHRSDVSITILVP 40 (468)
Q Consensus 13 ~GHv~P~l~LA~~L~~~G~~h~Vt~~~~ 40 (468)
.|- -..++|++|+++| ++|+++..
T Consensus 33 Sg~--iG~aiA~~~~~~G--a~V~l~~~ 56 (226)
T 1u7z_A 33 SGK--MGFAIAAAAARRG--ANVTLVSG 56 (226)
T ss_dssp CSH--HHHHHHHHHHHTT--CEEEEEEC
T ss_pred ccH--HHHHHHHHHHHCC--CEEEEEEC
Confidence 554 3578899999999 99999854
No 185
>3ucx_A Short chain dehydrogenase; ssgcid, seattle structural genomics center for infectious DI dehydrogenase, oxidoreductase; HET: 1PE; 1.85A {Mycobacterium smegmatis} SCOP: c.2.1.0
Probab=26.46 E-value=75 Score=27.81 Aligned_cols=33 Identities=6% Similarity=0.104 Sum_probs=26.5
Q ss_pred cceEEEecCCCccCHHHHHHHHHHHHhCCCCcEEEEEe
Q 044031 2 KKTIALYPGPAFHHMISMVELGKLILQHRSDVSITILV 39 (468)
Q Consensus 2 ~~~Iv~~~~~~~GHv~P~l~LA~~L~~~G~~h~Vt~~~ 39 (468)
+.++++++.++.| =..++|++|+++| ++|.++.
T Consensus 10 ~~k~vlVTGas~g---IG~aia~~l~~~G--~~V~~~~ 42 (264)
T 3ucx_A 10 TDKVVVISGVGPA---LGTTLARRCAEQG--ADLVLAA 42 (264)
T ss_dssp TTCEEEEESCCTT---HHHHHHHHHHHTT--CEEEEEE
T ss_pred CCcEEEEECCCcH---HHHHHHHHHHHCc--CEEEEEe
Confidence 3478888877665 4678999999999 9998874
No 186
>2pju_A Propionate catabolism operon regulatory protein; structural genomics, PRPR, transcriptional regulation, PSI- 2, protein structure initiative; 2.10A {Escherichia coli} SCOP: c.92.3.1
Probab=26.30 E-value=51 Score=28.52 Aligned_cols=40 Identities=3% Similarity=0.047 Sum_probs=31.8
Q ss_pred hHHHHHHHHhhhcCCCccEEEe-cCcHHHhhhCCCCeEEEec
Q 044031 93 SSNVFQALENISLTSKILSFII-TSTTSFSYHPNIPTYTYFN 133 (468)
Q Consensus 93 ~~~l~~ll~~~~~~~~pD~vI~-~~~~~vA~~lgIP~i~~~~ 133 (468)
....+..++++.+ .+.|+||. ..+..+|+++|+|.+.+.+
T Consensus 140 ~ee~~~~i~~l~~-~G~~vVVG~~~~~~~A~~~Gl~~vlI~s 180 (225)
T 2pju_A 140 EEDARGQINELKA-NGTEAVVGAGLITDLAEEAGMTGIFIYS 180 (225)
T ss_dssp HHHHHHHHHHHHH-TTCCEEEESHHHHHHHHHTTSEEEESSC
T ss_pred HHHHHHHHHHHHH-CCCCEEECCHHHHHHHHHcCCcEEEECC
Confidence 4456666666654 38999999 7788999999999999884
No 187
>3qbc_A 2-amino-4-hydroxy-6-hydroxymethyldihydropteridine pyrophosphokinase; protein-inhibitor complex, ferredoxin-like fold; HET: B55; 1.65A {Staphylococcus aureus}
Probab=26.27 E-value=65 Score=26.19 Aligned_cols=31 Identities=19% Similarity=0.117 Sum_probs=24.4
Q ss_pred eEEeccCCCcCCCHHHHHHHHHHHHhC-CCcE
Q 044031 272 VVFLCFGSRGTFSAPQLKEIAIGLERS-NQRF 302 (468)
Q Consensus 272 ~v~vs~GS~~~~~~~~~~~~~~al~~~-~~~~ 302 (468)
.+|+++||....+...+...+.+|+.. +..+
T Consensus 6 ~v~i~LGSNlGd~~~~l~~A~~~L~~~~~~~v 37 (161)
T 3qbc_A 6 QAYLGLGSNIGDRESQLNDAIKILNEYDGISV 37 (161)
T ss_dssp EEEEEEEECSSSHHHHHHHHHHHHHHSTTEEE
T ss_pred EEEEEEecCccCHHHHHHHHHHHHhcCCCCce
Confidence 699999999866777788888888874 3443
No 188
>2gk4_A Conserved hypothetical protein; alpha-beta-alpha sandwich, flavoprotein, structural genomics protein structure initiative; 1.83A {Streptococcus pneumoniae}
Probab=26.25 E-value=71 Score=27.73 Aligned_cols=25 Identities=8% Similarity=0.157 Sum_probs=20.6
Q ss_pred ccCHHHHHHHHHHHHhCCCCcEEEEEeCC
Q 044031 13 FHHMISMVELGKLILQHRSDVSITILVPS 41 (468)
Q Consensus 13 ~GHv~P~l~LA~~L~~~G~~h~Vt~~~~~ 41 (468)
.|.+ ..++|++|+++| ++|++++..
T Consensus 28 SG~m--G~aiA~~~~~~G--a~V~lv~~~ 52 (232)
T 2gk4_A 28 TGHL--GKIITETLLSAG--YEVCLITTK 52 (232)
T ss_dssp CCHH--HHHHHHHHHHTT--CEEEEEECT
T ss_pred CCHH--HHHHHHHHHHCC--CEEEEEeCC
Confidence 6654 577899999999 999999654
No 189
>3ro0_A Pyrrolidone-carboxylate peptidase; hydrolase-hydrolase inhibitor complex; HET: TPT; 1.50A {Bacillus amyloliquefaciens} SCOP: c.56.4.1 PDB: 3rnz_A* 1aug_A
Probab=26.19 E-value=69 Score=27.63 Aligned_cols=28 Identities=18% Similarity=-0.114 Sum_probs=21.0
Q ss_pred CcceEEEecCC-Ccc-CHHHHHHHHHHHHh
Q 044031 1 MKKTIALYPGP-AFH-HMISMVELGKLILQ 28 (468)
Q Consensus 1 m~~~Iv~~~~~-~~G-Hv~P~l~LA~~L~~ 28 (468)
||++|++.-|+ ..| .+||-..++++|..
T Consensus 1 ~m~~VLvTGF~PF~~~~~NPS~~~v~~L~~ 30 (223)
T 3ro0_A 1 MEKKVLLTGFDPFGGETVNPSWEAVKRLNG 30 (223)
T ss_dssp -CEEEEEEEECCCTTCSCCHHHHHHHHTTT
T ss_pred CCCEEEEEeCCCCCCCCCChHHHHHHHhcc
Confidence 66789888875 333 58999999999954
No 190
>1hyq_A MIND, cell division inhibitor (MIND-1); MINC, FTSZ, bacterial cell division, cell cycle; 2.60A {Archaeoglobus fulgidus} SCOP: c.37.1.10
Probab=25.52 E-value=65 Score=28.08 Aligned_cols=40 Identities=20% Similarity=0.202 Sum_probs=30.9
Q ss_pred CcceEEEec-CCCccCHHHHHHHHHHHHhCCCCcEEEEEeCCC
Q 044031 1 MKKTIALYP-GPAFHHMISMVELGKLILQHRSDVSITILVPSM 42 (468)
Q Consensus 1 m~~~Iv~~~-~~~~GHv~P~l~LA~~L~~~G~~h~Vt~~~~~~ 42 (468)
|++.|+++. -++-|-..-.+.||..|+++| ++|.++-.+.
T Consensus 1 M~~~I~v~s~kgGvGKTt~a~~LA~~la~~g--~~VlliD~D~ 41 (263)
T 1hyq_A 1 MVRTITVASGKGGTGKTTITANLGVALAQLG--HDVTIVDADI 41 (263)
T ss_dssp -CEEEEEEESSSCSCHHHHHHHHHHHHHHTT--CCEEEEECCC
T ss_pred CCeEEEEECCCCCCCHHHHHHHHHHHHHhCC--CcEEEEECCC
Confidence 544455544 468899999999999999999 9999995543
No 191
>3sc4_A Short chain dehydrogenase (A0QTM2 homolog); ssgcid, NIH, niaid, SBRI, UW, emerald biostructures, structu genomics; 2.50A {Mycobacterium thermoresistibile}
Probab=25.35 E-value=87 Score=27.83 Aligned_cols=35 Identities=9% Similarity=0.159 Sum_probs=27.7
Q ss_pred cceEEEecCCCccCHHHHHHHHHHHHhCCCCcEEEEEeCC
Q 044031 2 KKTIALYPGPAFHHMISMVELGKLILQHRSDVSITILVPS 41 (468)
Q Consensus 2 ~~~Iv~~~~~~~GHv~P~l~LA~~L~~~G~~h~Vt~~~~~ 41 (468)
+.++++++.++.| =..++|++|+++| ++|.++.-.
T Consensus 8 ~~k~vlVTGas~G---IG~aia~~l~~~G--~~V~~~~r~ 42 (285)
T 3sc4_A 8 RGKTMFISGGSRG---IGLAIAKRVAADG--ANVALVAKS 42 (285)
T ss_dssp TTCEEEEESCSSH---HHHHHHHHHHTTT--CEEEEEESC
T ss_pred CCCEEEEECCCCH---HHHHHHHHHHHCC--CEEEEEECC
Confidence 3578889877765 4578999999999 999888544
No 192
>3sju_A Keto reductase; short-chain dehydrogenase, oxidoreductase; HET: NDP; 2.40A {Streptomyces griseoruber}
Probab=25.26 E-value=69 Score=28.42 Aligned_cols=33 Identities=6% Similarity=0.076 Sum_probs=25.5
Q ss_pred cceEEEecCCCccCHHHHHHHHHHHHhCCCCcEEEEEe
Q 044031 2 KKTIALYPGPAFHHMISMVELGKLILQHRSDVSITILV 39 (468)
Q Consensus 2 ~~~Iv~~~~~~~GHv~P~l~LA~~L~~~G~~h~Vt~~~ 39 (468)
+.++++++.++.| =..++|++|+++| ++|.++.
T Consensus 23 ~~k~~lVTGas~G---IG~aia~~la~~G--~~V~~~~ 55 (279)
T 3sju_A 23 RPQTAFVTGVSSG---IGLAVARTLAARG--IAVYGCA 55 (279)
T ss_dssp --CEEEEESTTSH---HHHHHHHHHHHTT--CEEEEEE
T ss_pred CCCEEEEeCCCCH---HHHHHHHHHHHCC--CEEEEEe
Confidence 3468888877664 4678999999999 9998874
No 193
>1ek6_A UDP-galactose 4-epimerase; short-chain dehydrogenase, galactosemia, isomerase; HET: NAI UPG; 1.50A {Homo sapiens} SCOP: c.2.1.2 PDB: 1ek5_A* 1hzj_A* 1i3k_A* 1i3l_A* 1i3m_A* 1i3n_A*
Probab=25.26 E-value=63 Score=29.48 Aligned_cols=34 Identities=6% Similarity=-0.077 Sum_probs=24.6
Q ss_pred CcceEEEecCCCccCHHHHHHHHHHHHhCCCCcEEEEEeC
Q 044031 1 MKKTIALYPGPAFHHMISMVELGKLILQHRSDVSITILVP 40 (468)
Q Consensus 1 m~~~Iv~~~~~~~GHv~P~l~LA~~L~~~G~~h~Vt~~~~ 40 (468)
|+++|++. |+.|.+ ...|+++|+++| |+|+.+.-
T Consensus 1 M~~~vlVt--GatG~i--G~~l~~~L~~~g--~~V~~~~r 34 (348)
T 1ek6_A 1 MAEKVLVT--GGAGYI--GSHTVLELLEAG--YLPVVIDN 34 (348)
T ss_dssp CCSEEEEE--TTTSHH--HHHHHHHHHHTT--CCEEEEEC
T ss_pred CCCEEEEE--CCCCHH--HHHHHHHHHHCC--CEEEEEec
Confidence 76555443 555655 467899999999 99998853
No 194
>3rkr_A Short chain oxidoreductase; rossmann fold; HET: NAP; 2.42A {Uncultured bacterium BIO5}
Probab=25.20 E-value=79 Score=27.62 Aligned_cols=33 Identities=6% Similarity=0.070 Sum_probs=25.9
Q ss_pred ceEEEecCCCccCHHHHHHHHHHHHhCCCCcEEEEEeC
Q 044031 3 KTIALYPGPAFHHMISMVELGKLILQHRSDVSITILVP 40 (468)
Q Consensus 3 ~~Iv~~~~~~~GHv~P~l~LA~~L~~~G~~h~Vt~~~~ 40 (468)
.++++++.++.| =..++|++|+++| ++|.++.-
T Consensus 29 ~k~vlITGas~g---IG~~la~~l~~~G--~~V~~~~r 61 (262)
T 3rkr_A 29 GQVAVVTGASRG---IGAAIARKLGSLG--ARVVLTAR 61 (262)
T ss_dssp TCEEEESSTTSH---HHHHHHHHHHHTT--CEEEEEES
T ss_pred CCEEEEECCCCh---HHHHHHHHHHHCC--CEEEEEEC
Confidence 468888866654 4678999999999 99988743
No 195
>3h7a_A Short chain dehydrogenase; oxidoreductase, PSI-2, NYSGXRC, structural genomics, protein structure initiative; 1.87A {Rhodopseudomonas palustris}
Probab=25.18 E-value=74 Score=27.67 Aligned_cols=33 Identities=9% Similarity=-0.069 Sum_probs=26.4
Q ss_pred ceEEEecCCCccCHHHHHHHHHHHHhCCCCcEEEEEeC
Q 044031 3 KTIALYPGPAFHHMISMVELGKLILQHRSDVSITILVP 40 (468)
Q Consensus 3 ~~Iv~~~~~~~GHv~P~l~LA~~L~~~G~~h~Vt~~~~ 40 (468)
.++++++.++.| =..++|++|+++| ++|.++.-
T Consensus 7 ~k~vlVTGas~G---IG~aia~~l~~~G--~~V~~~~r 39 (252)
T 3h7a_A 7 NATVAVIGAGDY---IGAEIAKKFAAEG--FTVFAGRR 39 (252)
T ss_dssp SCEEEEECCSSH---HHHHHHHHHHHTT--CEEEEEES
T ss_pred CCEEEEECCCch---HHHHHHHHHHHCC--CEEEEEeC
Confidence 468888876654 4679999999999 99988843
No 196
>4h1h_A LMO1638 protein; MCCF-like, csgid, MCCF homolog, structural genomics, niaid, institute of allergy and infectious diseases; 2.46A {Listeria monocytogenes}
Probab=25.05 E-value=74 Score=29.23 Aligned_cols=74 Identities=8% Similarity=0.045 Sum_probs=49.3
Q ss_pred CCCHHHHHHHHHHHHhCCCcEEEEEeCCCCccccCCChhHHhhccCCCeEecCCCCHHhhhCccCcceEEecCCcchHHH
Q 044031 282 TFSAPQLKEIAIGLERSNQRFLWVVRNPSNAAEAELPEGFLERTKERGLVVKSWAPQSTILGHESVGGFVTHCGWSSVVE 361 (468)
Q Consensus 282 ~~~~~~~~~~~~al~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~pq~~il~~~~~~~~ithgG~~s~~e 361 (468)
..+.+...++.+++.+...+.||...++.. -..+.++++...+-.+|.. ||=..-..++.-
T Consensus 61 gtd~~Ra~dL~~a~~Dp~i~aI~~~rGG~g-----------------~~rlL~~LD~~~i~~~PK~--~~GySDiT~L~~ 121 (327)
T 4h1h_A 61 SSIRSRVADIHEAFNDSSVKAILTVIGGFN-----------------SNQLLPYLDYDLISENPKI--LCGFSDITALAT 121 (327)
T ss_dssp CCHHHHHHHHHHHHHCTTEEEEEESCCCSC-----------------GGGGGGGCCHHHHHHSCCE--EEECTTHHHHHH
T ss_pred CCHHHHHHHHHHHhhCCCCCEEEEcCCchh-----------------HHHHhhhcchhhhccCCeE--EEecccccHHHH
Confidence 345567888999999999999998877511 0113366666666666666 776666666666
Q ss_pred HHH--hCCcEEeccc
Q 044031 362 AVT--YGVPMIAWPL 374 (468)
Q Consensus 362 al~--~GvP~v~~P~ 374 (468)
+++ .|+..+.=|.
T Consensus 122 al~~~~g~~t~hGp~ 136 (327)
T 4h1h_A 122 AIYTQTELITYSGAH 136 (327)
T ss_dssp HHHHHHCBCEEECCC
T ss_pred HHHHhcCeEEEeCcc
Confidence 664 4666665554
No 197
>3q9l_A Septum site-determining protein MIND; ATPase, bacterial cell division inhibitor, MINC, MINE, cell hydrolase; HET: ATP; 2.34A {Escherichia coli} PDB: 3r9i_A* 3r9j_A*
Probab=25.03 E-value=69 Score=27.76 Aligned_cols=40 Identities=13% Similarity=0.155 Sum_probs=30.3
Q ss_pred CcceEEEecC-CCccCHHHHHHHHHHHHhCCCCcEEEEEeCCC
Q 044031 1 MKKTIALYPG-PAFHHMISMVELGKLILQHRSDVSITILVPSM 42 (468)
Q Consensus 1 m~~~Iv~~~~-~~~GHv~P~l~LA~~L~~~G~~h~Vt~~~~~~ 42 (468)
|...|+++.. |+-|-..-...||..|+++| ++|.++-.+.
T Consensus 1 M~~vi~v~s~kgGvGKTt~a~~LA~~la~~g--~~VlliD~D~ 41 (260)
T 3q9l_A 1 MARIIVVTSGKGGVGKTTSSAAIATGLAQKG--KKTVVIDFAI 41 (260)
T ss_dssp -CEEEEEECSSTTSSHHHHHHHHHHHHHHTT--CCEEEEECCC
T ss_pred CCeEEEEECCCCCCcHHHHHHHHHHHHHhCC--CcEEEEECCC
Confidence 5434444433 68899999999999999999 9999995443
No 198
>2pju_A Propionate catabolism operon regulatory protein; structural genomics, PRPR, transcriptional regulation, PSI- 2, protein structure initiative; 2.10A {Escherichia coli} SCOP: c.92.3.1
Probab=24.99 E-value=85 Score=27.09 Aligned_cols=29 Identities=10% Similarity=0.134 Sum_probs=23.5
Q ss_pred cceEEecCCcchHHHHHHhCCcEEeccccc
Q 044031 347 VGGFVTHCGWSSVVEAVTYGVPMIAWPLYA 376 (468)
Q Consensus 347 ~~~~ithgG~~s~~eal~~GvP~v~~P~~~ 376 (468)
++++|++||-....... .++|+|-++..+
T Consensus 64 ~dVIISRGgta~~Lr~~-~~iPVV~I~vs~ 92 (225)
T 2pju_A 64 CDAIIAAGSNGAYLKSR-LSVPVILIKPSG 92 (225)
T ss_dssp CSEEEEEHHHHHHHHTT-CSSCEEEECCCH
T ss_pred CeEEEeCChHHHHHHhh-CCCCEEEecCCH
Confidence 34499999988888875 589999999853
No 199
>3obb_A Probable 3-hydroxyisobutyrate dehydrogenase; structural genomics, PSI-2, protein structure initiative, MI center for structural genomics; HET: EPE; 2.20A {Pseudomonas aeruginosa} PDB: 3q3c_A*
Probab=24.92 E-value=57 Score=29.58 Aligned_cols=30 Identities=17% Similarity=0.200 Sum_probs=26.7
Q ss_pred CcceEEEecCCCccCHHHHHHHHHHHHhCCCCcEEEEE
Q 044031 1 MKKTIALYPGPAFHHMISMVELGKLILQHRSDVSITIL 38 (468)
Q Consensus 1 m~~~Iv~~~~~~~GHv~P~l~LA~~L~~~G~~h~Vt~~ 38 (468)
| .+|.|+-.+..|. .+|+.|.++| |+|++.
T Consensus 3 M-~kIgfIGlG~MG~-----~mA~~L~~~G--~~v~v~ 32 (300)
T 3obb_A 3 M-KQIAFIGLGHMGA-----PMATNLLKAG--YLLNVF 32 (300)
T ss_dssp C-CEEEEECCSTTHH-----HHHHHHHHTT--CEEEEE
T ss_pred c-CEEEEeeehHHHH-----HHHHHHHhCC--CeEEEE
Confidence 5 4799999999985 6899999999 999988
No 200
>3s55_A Putative short-chain dehydrogenase/reductase; structural genomics, seattle structural genomics center for infectious disease, ssgcid; HET: NAD; 2.10A {Mycobacterium abscessus} SCOP: c.2.1.0
Probab=24.77 E-value=73 Score=28.17 Aligned_cols=33 Identities=18% Similarity=0.017 Sum_probs=26.9
Q ss_pred ceEEEecCCCccCHHHHHHHHHHHHhCCCCcEEEEEeC
Q 044031 3 KTIALYPGPAFHHMISMVELGKLILQHRSDVSITILVP 40 (468)
Q Consensus 3 ~~Iv~~~~~~~GHv~P~l~LA~~L~~~G~~h~Vt~~~~ 40 (468)
.++++++.++.| =..++|++|+++| ++|.++.-
T Consensus 10 ~k~~lVTGas~g---IG~a~a~~l~~~G--~~V~~~~r 42 (281)
T 3s55_A 10 GKTALITGGARG---MGRSHAVALAEAG--ADIAICDR 42 (281)
T ss_dssp TCEEEEETTTSH---HHHHHHHHHHHTT--CEEEEEEC
T ss_pred CCEEEEeCCCch---HHHHHHHHHHHCC--CeEEEEeC
Confidence 478888877765 4678999999999 99988854
No 201
>2l82_A Designed protein OR32; structural genomics, northeast structural genomics consortiu PSI-biology, protein structure initiative, de novo protein; NMR {Artificial gene}
Probab=24.77 E-value=1.3e+02 Score=22.31 Aligned_cols=34 Identities=26% Similarity=0.455 Sum_probs=27.8
Q ss_pred eEEeccCCCcCCCHHHHHHHHHHHHhCCCcEEEEEeCC
Q 044031 272 VVFLCFGSRGTFSAPQLKEIAIGLERSNQRFLWVVRNP 309 (468)
Q Consensus 272 ~v~vs~GS~~~~~~~~~~~~~~al~~~~~~~l~~~~~~ 309 (468)
-|||.|.| +++.+++++..+++.|.+++..+..+
T Consensus 3 qifvvfss----dpeilkeivreikrqgvrvvllysdq 36 (162)
T 2l82_A 3 QIFVVFSS----DPEILKEIVREIKRQGVRVVLLYSDQ 36 (162)
T ss_dssp EEEEEEES----CHHHHHHHHHHHHHTTCEEEEEECCS
T ss_pred eEEEEecC----CHHHHHHHHHHHHhCCeEEEEEecCc
Confidence 56666643 67889999999999999999888775
No 202
>2xws_A Sirohydrochlorin cobaltochelatase; lyase, beta-alpha-beta, cobalamin biosynthesis, metal-bindin parallel beta sheet; 1.60A {Archaeoglobus fulgidus} PDB: 2dj5_A* 2xwq_A
Probab=24.75 E-value=1e+02 Score=23.51 Aligned_cols=41 Identities=15% Similarity=0.056 Sum_probs=30.4
Q ss_pred CcceEEEecCCCcc-C-HHHHHHHHHHHHhCCCCcEEEEEeCC
Q 044031 1 MKKTIALYPGPAFH-H-MISMVELGKLILQHRSDVSITILVPS 41 (468)
Q Consensus 1 m~~~Iv~~~~~~~G-H-v~P~l~LA~~L~~~G~~h~Vt~~~~~ 41 (468)
|+.-|+++..|+.. . -..+-.+++.|+++.++..|.+...+
T Consensus 2 m~~alllv~HGS~~~~~~~~~~~la~~l~~~~~~~~V~~a~le 44 (133)
T 2xws_A 2 MRRGLVIVGHGSQLNHYREVMELHRKRIEESGAFDEVKIAFAA 44 (133)
T ss_dssp CCEEEEEEECSCCCHHHHHHHHHHHHHHHHHTSSSEEEEEESS
T ss_pred CcceEEEEECCCCCHHHHHHHHHHHHHHHhhCCCCcEEeeeee
Confidence 77679999999874 2 34788999999988655677666444
No 203
>1u9c_A APC35852; structural genomics, protein structure initiative, MCSG, PAR disease, chaperone, cysteine protease, PSI; 1.35A {Geobacillus stearothermophilus} SCOP: c.23.16.2
Probab=24.73 E-value=1.3e+02 Score=25.38 Aligned_cols=40 Identities=5% Similarity=-0.066 Sum_probs=29.4
Q ss_pred CcceEEEecCC---------CccCHHHHHHHHHHHHhCCCCcEEEEEeCCC
Q 044031 1 MKKTIALYPGP---------AFHHMISMVELGKLILQHRSDVSITILVPSM 42 (468)
Q Consensus 1 m~~~Iv~~~~~---------~~GHv~P~l~LA~~L~~~G~~h~Vt~~~~~~ 42 (468)
|+++|+++... ..-...=+....+.|.++| ++|++++...
T Consensus 4 m~~kv~ill~~~~~~~~~~~~G~~~~e~~~p~~~l~~ag--~~v~~vs~~~ 52 (224)
T 1u9c_A 4 MSKRVLMVVTNHTTITDDHKTGLWLEEFAVPYLVFQEKG--YDVKVASIQG 52 (224)
T ss_dssp CCCEEEEEECCCCEEETTEECCBCHHHHHHHHHHHHHTT--CEEEEEESSC
T ss_pred CCceEEEEECCcccccCCCCCceeHHHHHHHHHHHHHCC--CeEEEECCCC
Confidence 65678888762 2334466777888899999 9999998654
No 204
>2qs7_A Uncharacterized protein; putative oxidoreductase of the DSRE/DSRF-like family, struct genomics, joint center for structural genomics; HET: MSE EPE; 2.09A {Sulfolobus solfataricus P2}
Probab=24.69 E-value=93 Score=24.54 Aligned_cols=36 Identities=3% Similarity=-0.027 Sum_probs=29.1
Q ss_pred eEEEecCCCccCHHHHHHHHHHHHhCCCCcEEEEEeCC
Q 044031 4 TIALYPGPAFHHMISMVELGKLILQHRSDVSITILVPS 41 (468)
Q Consensus 4 ~Iv~~~~~~~GHv~P~l~LA~~L~~~G~~h~Vt~~~~~ 41 (468)
-.+++..+..-.+++.+.+|...++.| ++|+++-+.
T Consensus 10 l~II~~sg~~d~~~~a~~lA~~Aaa~g--~eV~iF~t~ 45 (144)
T 2qs7_A 10 LSIIVFSGTIDKLMPVGILTSGAAASG--YEVNLFFTF 45 (144)
T ss_dssp EEEEECCCSHHHHHHHHHHHHHHHHTT--CEEEEEECH
T ss_pred EEEEEEcCCHHHHHHHHHHHHHHHHcC--CcEEEEEeh
Confidence 344555567888999999999999999 999999543
No 205
>1e7w_A Pteridine reductase; dihydrofolate reductase, shortchain dehydrogenase, methotrexate resistance, oxidoreductase; HET: NDP MTX; 1.75A {Leishmania major} SCOP: c.2.1.2 PDB: 1w0c_A* 1e92_A* 2bf7_A* 2bfa_A* 2bfm_A* 2bfo_A* 2bfp_A* 2p8k_A* 3h4v_A* 2xox_A 1p33_A*
Probab=24.66 E-value=76 Score=28.32 Aligned_cols=33 Identities=12% Similarity=0.091 Sum_probs=26.4
Q ss_pred cceEEEecCCCccCHHHHHHHHHHHHhCCCCcEEEEEe
Q 044031 2 KKTIALYPGPAFHHMISMVELGKLILQHRSDVSITILV 39 (468)
Q Consensus 2 ~~~Iv~~~~~~~GHv~P~l~LA~~L~~~G~~h~Vt~~~ 39 (468)
+.++++++.++.| =..++|++|+++| ++|+++.
T Consensus 8 ~~k~~lVTGas~G---IG~aia~~la~~G--~~V~~~~ 40 (291)
T 1e7w_A 8 TVPVALVTGAAKR---LGRSIAEGLHAEG--YAVCLHY 40 (291)
T ss_dssp CCCEEEETTCSSH---HHHHHHHHHHHTT--CEEEEEE
T ss_pred CCCEEEEECCCch---HHHHHHHHHHHCC--CeEEEEc
Confidence 3468888876654 4678999999999 9998884
No 206
>1p3y_1 MRSD protein; flavoprotein, FMN, rossmann fold, HFCD family, oxdidative decarboxylation, cystein, lantibiotics, mersacidin, oxidore; HET: FAD; 2.54A {Bacillus SP} SCOP: c.34.1.1
Probab=24.63 E-value=61 Score=27.25 Aligned_cols=36 Identities=6% Similarity=-0.032 Sum_probs=30.5
Q ss_pred ceEEEecCCCccCHHHHHHHHHHHHhCCCCcEEEEEeCC
Q 044031 3 KTIALYPGPAFHHMISMVELGKLILQHRSDVSITILVPS 41 (468)
Q Consensus 3 ~~Iv~~~~~~~GHv~P~l~LA~~L~~~G~~h~Vt~~~~~ 41 (468)
+||++.-.|+.|=.. ...|.+.|.++| ++|.++.+.
T Consensus 9 k~IllgvTGs~aa~k-~~~l~~~L~~~g--~~V~vv~T~ 44 (194)
T 1p3y_1 9 KKLLIGICGSISSVG-ISSYLLYFKSFF--KEIRVVMTK 44 (194)
T ss_dssp CEEEEEECSCGGGGG-THHHHHHHTTTS--SEEEEEECH
T ss_pred CEEEEEEECHHHHHH-HHHHHHHHHHCC--CEEEEEEch
Confidence 588888888877775 799999999999 999999654
No 207
>2qq5_A DHRS1, dehydrogenase/reductase SDR family member 1; short-chain, structura genomics consortium, SGC, oxidoreductase; 1.80A {Homo sapiens}
Probab=24.59 E-value=77 Score=27.61 Aligned_cols=34 Identities=9% Similarity=0.066 Sum_probs=26.5
Q ss_pred CcceEEEecCCCccCHHHHHHHHHHHHhCCCCcEEEEEe
Q 044031 1 MKKTIALYPGPAFHHMISMVELGKLILQHRSDVSITILV 39 (468)
Q Consensus 1 m~~~Iv~~~~~~~GHv~P~l~LA~~L~~~G~~h~Vt~~~ 39 (468)
|+.++++++.++.| =..++|++|+++| ++|.++.
T Consensus 3 l~~k~vlVTGas~g---IG~~ia~~l~~~G--~~V~~~~ 36 (260)
T 2qq5_A 3 MNGQVCVVTGASRG---IGRGIALQLCKAG--ATVYITG 36 (260)
T ss_dssp TTTCEEEESSTTSH---HHHHHHHHHHHTT--CEEEEEE
T ss_pred CCCCEEEEeCCCch---HHHHHHHHHHHCC--CEEEEEe
Confidence 45578888866654 3678999999999 9998874
No 208
>4iiu_A 3-oxoacyl-[acyl-carrier protein] reductase; structural genomics, center for structural genomics of infec diseases, csgid; HET: NAP; 2.10A {Escherichia coli} PDB: 4iiv_A*
Probab=24.55 E-value=1e+02 Score=26.85 Aligned_cols=33 Identities=9% Similarity=0.056 Sum_probs=25.2
Q ss_pred ceEEEecCCCccCHHHHHHHHHHHHhCCCCcEEEEEeC
Q 044031 3 KTIALYPGPAFHHMISMVELGKLILQHRSDVSITILVP 40 (468)
Q Consensus 3 ~~Iv~~~~~~~GHv~P~l~LA~~L~~~G~~h~Vt~~~~ 40 (468)
.+.++++.++.| =..++|++|+++| ++|.++..
T Consensus 26 ~k~vlVTGas~g---IG~~la~~l~~~G--~~v~i~~~ 58 (267)
T 4iiu_A 26 SRSVLVTGASKG---IGRAIARQLAADG--FNIGVHYH 58 (267)
T ss_dssp CCEEEETTTTSH---HHHHHHHHHHHTT--CEEEEEES
T ss_pred CCEEEEECCCCh---HHHHHHHHHHHCC--CEEEEEeC
Confidence 467888866544 3678999999999 99977643
No 209
>1x1t_A D(-)-3-hydroxybutyrate dehydrogenase; NAD, NADH, SDR, short chain dehydrogenase, ketone BODY, beta hydroxybutyrate, oxidoreductase; HET: NAD; 1.52A {Pseudomonas fragi} SCOP: c.2.1.2 PDB: 1wmb_A* 2ztl_A* 2ztv_A* 2ztm_A* 2ztu_A* 2yz7_A 2zea_A* 3eew_A* 3vdq_A* 3vdr_A*
Probab=24.36 E-value=78 Score=27.57 Aligned_cols=34 Identities=12% Similarity=0.152 Sum_probs=26.4
Q ss_pred CcceEEEecCCCccCHHHHHHHHHHHHhCCCCcEEEEEe
Q 044031 1 MKKTIALYPGPAFHHMISMVELGKLILQHRSDVSITILV 39 (468)
Q Consensus 1 m~~~Iv~~~~~~~GHv~P~l~LA~~L~~~G~~h~Vt~~~ 39 (468)
|+.++++++.++.| =..++|++|+++| ++|+++.
T Consensus 2 l~~k~vlVTGas~g---IG~~ia~~l~~~G--~~V~~~~ 35 (260)
T 1x1t_A 2 LKGKVAVVTGSTSG---IGLGIATALAAQG--ADIVLNG 35 (260)
T ss_dssp CTTCEEEETTCSSH---HHHHHHHHHHHTT--CEEEEEC
T ss_pred CCCCEEEEeCCCcH---HHHHHHHHHHHcC--CEEEEEe
Confidence 34568888866654 3678999999999 9998873
No 210
>1kjn_A MTH0777; hypotethical protein, structural genomics, PSI, protein structure initiative; 2.20A {Methanothermobacterthermautotrophicus} SCOP: c.115.1.1
Probab=24.21 E-value=89 Score=24.94 Aligned_cols=32 Identities=6% Similarity=0.062 Sum_probs=24.2
Q ss_pred EecCC-CccCHHHHHHHHHHHHhCCCCcEEEEEeC
Q 044031 7 LYPGP-AFHHMISMVELGKLILQHRSDVSITILVP 40 (468)
Q Consensus 7 ~~~~~-~~GHv~P~l~LA~~L~~~G~~h~Vt~~~~ 40 (468)
++-.| ..-.+--.+-++..|.++| |+|++++.
T Consensus 12 lLGCPE~Pvq~p~~lYl~~~Lk~~G--~~v~VA~n 44 (157)
T 1kjn_A 12 VLGCPESPVQIPLAIYTSHKLKKKG--FRVTVTAN 44 (157)
T ss_dssp ECCCSCSTTHHHHHHHHHHHHHHTT--CEEEEEEC
T ss_pred EecCCCCcchhhHHHHHHHHHHhcC--CeeEEecC
Confidence 33345 4455566789999999999 99999954
No 211
>3da8_A Probable 5'-phosphoribosylglycinamide formyltransferase PURN; glycinamide ribonucleotide transformylase, structure; 1.30A {Mycobacterium tuberculosis} PDB: 3dcj_A*
Probab=24.20 E-value=2.5e+02 Score=23.87 Aligned_cols=69 Identities=20% Similarity=0.212 Sum_probs=47.4
Q ss_pred HHHHHHHHhCCCcEEEEEeCCCCccccCCChhHHhhccCCCeEecCCCCHHhhhCccCcceEEecCCcchHHHHHHhCCc
Q 044031 289 KEIAIGLERSNQRFLWVVRNPSNAAEAELPEGFLERTKERGLVVKSWAPQSTILGHESVGGFVTHCGWSSVVEAVTYGVP 368 (468)
Q Consensus 289 ~~~~~al~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~pq~~il~~~~~~~~ithgG~~s~~eal~~GvP 368 (468)
.++.+.|+..+..++.+.+.. ..+|+.+.+......+-+ |++. .=..-|+..+..|+.+|+.
T Consensus 79 ~~~~~~l~~~~~Dlivlagy~-----~iL~~~~l~~~~~~~iNi-----------HpSL--LP~yrG~~pi~~Ai~~G~~ 140 (215)
T 3da8_A 79 VAITAATAAHEPDLVVSAGFM-----RILGPQFLSRFYGRTLNT-----------HPAL--LPAFPGTHGVADALAYGVK 140 (215)
T ss_dssp HHHHHHHHTTCCSEEEEEECC-----SCCCHHHHHHHTTTEEEE-----------ESSC--TTSSCSTTHHHHHHHHTCS
T ss_pred HHHHHHHHhhCCCEEEEcCch-----hhCCHHHHhhccCCeEEe-----------Cccc--ccCCCCchHHHHHHHcCCC
Confidence 447788888888888888764 557777765443222222 4443 3345689999999999999
Q ss_pred EEecccc
Q 044031 369 MIAWPLY 375 (468)
Q Consensus 369 ~v~~P~~ 375 (468)
..++=.+
T Consensus 141 ~tGvTvh 147 (215)
T 3da8_A 141 VTGATVH 147 (215)
T ss_dssp EEEEEEE
T ss_pred eEEEEEE
Confidence 8887753
No 212
>3c1o_A Eugenol synthase; phenylpropene, PIP reductase, short-chain dehydrogenase/reductase, oxidoreductase; HET: NAP; 1.80A {Clarkia breweri}
Probab=24.16 E-value=66 Score=29.01 Aligned_cols=34 Identities=12% Similarity=0.027 Sum_probs=24.3
Q ss_pred cceEEEecCCCccCHHHHHHHHHHHHhCCCCcEEEEEeCC
Q 044031 2 KKTIALYPGPAFHHMISMVELGKLILQHRSDVSITILVPS 41 (468)
Q Consensus 2 ~~~Iv~~~~~~~GHv~P~l~LA~~L~~~G~~h~Vt~~~~~ 41 (468)
+++|+++ |+.|.+ ...|+++|.++| |+|+.++-.
T Consensus 4 ~~~ilVt--GatG~i--G~~l~~~L~~~g--~~V~~~~R~ 37 (321)
T 3c1o_A 4 MEKIIIY--GGTGYI--GKFMVRASLSFS--HPTFIYARP 37 (321)
T ss_dssp CCCEEEE--TTTSTT--HHHHHHHHHHTT--CCEEEEECC
T ss_pred ccEEEEE--cCCchh--HHHHHHHHHhCC--CcEEEEECC
Confidence 3455444 566665 457889999999 999998654
No 213
>3f8d_A Thioredoxin reductase (TRXB-3); redox protein, nucleotide binding, FAD, flavoprotein, oxidoreductase; HET: FAD; 1.40A {Sulfolobus solfataricus} PDB: 3f8p_A* 3f8r_A*
Probab=24.04 E-value=41 Score=30.20 Aligned_cols=32 Identities=3% Similarity=-0.148 Sum_probs=25.8
Q ss_pred cceEEEecCCCccCHHHHHHHHHHHHhCCCCcEEEEEeC
Q 044031 2 KKTIALYPGPAFHHMISMVELGKLILQHRSDVSITILVP 40 (468)
Q Consensus 2 ~~~Iv~~~~~~~GHv~P~l~LA~~L~~~G~~h~Vt~~~~ 40 (468)
+.+|+++-.+..| +..|..|+++| ++|+++-.
T Consensus 15 ~~~vvIIG~G~aG-----l~aA~~l~~~g--~~v~lie~ 46 (323)
T 3f8d_A 15 KFDVIIVGLGPAA-----YGAALYSARYM--LKTLVIGE 46 (323)
T ss_dssp EEEEEEECCSHHH-----HHHHHHHHHTT--CCEEEEES
T ss_pred ccCEEEECccHHH-----HHHHHHHHHCC--CcEEEEec
Confidence 3578888877666 78899999999 99999943
No 214
>3qha_A Putative oxidoreductase; seattle structural genomics center for infectious disease, S mycobacterium avium 104, rossmann fold; 2.25A {Mycobacterium avium}
Probab=24.03 E-value=47 Score=29.91 Aligned_cols=31 Identities=3% Similarity=-0.015 Sum_probs=26.2
Q ss_pred cceEEEecCCCccCHHHHHHHHHHHHhCCCCcEEEEEe
Q 044031 2 KKTIALYPGPAFHHMISMVELGKLILQHRSDVSITILV 39 (468)
Q Consensus 2 ~~~Iv~~~~~~~GHv~P~l~LA~~L~~~G~~h~Vt~~~ 39 (468)
+++|.++-.|..|. .+|+.|+++| |+|+++.
T Consensus 15 ~~~I~vIG~G~mG~-----~~A~~l~~~G--~~V~~~d 45 (296)
T 3qha_A 15 QLKLGYIGLGNMGA-----PMATRMTEWP--GGVTVYD 45 (296)
T ss_dssp CCCEEEECCSTTHH-----HHHHHHTTST--TCEEEEC
T ss_pred CCeEEEECcCHHHH-----HHHHHHHHCC--CeEEEEe
Confidence 45799998888775 6899999999 9999984
No 215
>2an1_A Putative kinase; structural genomics, PSI, protein structure initiative, midwest center for structural genomics, MCSG, transferase; 2.00A {Salmonella typhimurium}
Probab=24.03 E-value=39 Score=30.45 Aligned_cols=27 Identities=15% Similarity=0.027 Sum_probs=23.2
Q ss_pred ceEEecCCcchHHHHHHh----CCcEEeccc
Q 044031 348 GGFVTHCGWSSVVEAVTY----GVPMIAWPL 374 (468)
Q Consensus 348 ~~~ithgG~~s~~eal~~----GvP~v~~P~ 374 (468)
+++|+-||=||+.+++.. ++|+++++.
T Consensus 65 D~vi~~GGDGT~l~a~~~~~~~~~P~lGI~~ 95 (292)
T 2an1_A 65 DLAVVVGGDGNMLGAARTLARYDINVIGINR 95 (292)
T ss_dssp SEEEECSCHHHHHHHHHHHTTSSCEEEEBCS
T ss_pred CEEEEEcCcHHHHHHHHHhhcCCCCEEEEEC
Confidence 449999999999999853 889999984
No 216
>3pxx_A Carveol dehydrogenase; structural genomics, seattle structural genomics center for infectious disease, ssgcid, NAD, tuberculosis; HET: NAD; 2.00A {Mycobacterium avium} SCOP: c.2.1.0
Probab=24.03 E-value=77 Score=28.03 Aligned_cols=33 Identities=12% Similarity=0.056 Sum_probs=26.8
Q ss_pred ceEEEecCCCccCHHHHHHHHHHHHhCCCCcEEEEEeC
Q 044031 3 KTIALYPGPAFHHMISMVELGKLILQHRSDVSITILVP 40 (468)
Q Consensus 3 ~~Iv~~~~~~~GHv~P~l~LA~~L~~~G~~h~Vt~~~~ 40 (468)
.++++++.++.| =..++|++|+++| ++|.++.-
T Consensus 10 gk~vlVTGas~g---IG~~ia~~l~~~G--~~V~~~~~ 42 (287)
T 3pxx_A 10 DKVVLVTGGARG---QGRSHAVKLAEEG--ADIILFDI 42 (287)
T ss_dssp TCEEEEETTTSH---HHHHHHHHHHHTT--CEEEEEEC
T ss_pred CCEEEEeCCCCh---HHHHHHHHHHHCC--CeEEEEcc
Confidence 478888877664 4678999999999 99988853
No 217
>1v5e_A Pyruvate oxidase; oxidoreductase, flavoprotein; HET: FAD; 1.60A {Aerococcus viridans} SCOP: c.31.1.3 c.36.1.5 c.36.1.9 PDB: 2dji_A* 1v5f_A* 1v5g_A*
Probab=23.94 E-value=1.7e+02 Score=29.36 Aligned_cols=27 Identities=22% Similarity=0.319 Sum_probs=22.9
Q ss_pred cceEEecCC------cchHHHHHHhCCcEEecc
Q 044031 347 VGGFVTHCG------WSSVVEAVTYGVPMIAWP 373 (468)
Q Consensus 347 ~~~~ithgG------~~s~~eal~~GvP~v~~P 373 (468)
.+++++|.| .+.+.||...++|+|++-
T Consensus 69 ~~v~~~tsGpG~~N~~~gl~~A~~~~vPll~It 101 (590)
T 1v5e_A 69 LGVTVGSGGPGASHLINGLYDAAMDNIPVVAIL 101 (590)
T ss_dssp CCEEEECTTHHHHTTHHHHHHHHHHTCCEEEEE
T ss_pred CEEEEeCcChHHHHHHHHHHHHHhcCCCEEEEc
Confidence 445999998 558999999999999984
No 218
>2qk4_A Trifunctional purine biosynthetic protein adenosi; purine synthesis, enzyme, protein-ATP complex, structural GE structural genomics consortium, SGC; HET: ATP; 2.45A {Homo sapiens}
Probab=23.69 E-value=3.2e+02 Score=25.93 Aligned_cols=33 Identities=18% Similarity=0.248 Sum_probs=22.9
Q ss_pred CcceEEEecCCCccCHHHHHHHHHHHHh-CCCCcEEEEEeC
Q 044031 1 MKKTIALYPGPAFHHMISMVELGKLILQ-HRSDVSITILVP 40 (468)
Q Consensus 1 m~~~Iv~~~~~~~GHv~P~l~LA~~L~~-~G~~h~Vt~~~~ 40 (468)
|+++|+++..+. ...++++.|++ .| +++.++.+
T Consensus 23 m~~~IlIlG~g~-----r~~al~~~~a~~~g--~~~v~~~~ 56 (452)
T 2qk4_A 23 MAARVLIIGSGG-----REHTLAWKLAQSHH--VKQVLVAP 56 (452)
T ss_dssp CSEEEEEEECSH-----HHHHHHHHHTTCTT--EEEEEEEE
T ss_pred cCcEEEEECCCH-----HHHHHHHHHHhcCC--CCEEEEEC
Confidence 567888887763 35677888765 47 88777644
No 219
>3nks_A Protoporphyrinogen oxidase; FAD containing protein, PPO, variegate porphyria disease, VP oxidoreductase-oxidoreductase inhibitor complex; HET: ACJ FAD; 1.90A {Homo sapiens}
Probab=23.67 E-value=46 Score=32.13 Aligned_cols=31 Identities=10% Similarity=0.186 Sum_probs=25.8
Q ss_pred CcceEEEecCCCccCHHHHHHHHHHHHhCCCCc--EEEEE
Q 044031 1 MKKTIALYPGPAFHHMISMVELGKLILQHRSDV--SITIL 38 (468)
Q Consensus 1 m~~~Iv~~~~~~~GHv~P~l~LA~~L~~~G~~h--~Vt~~ 38 (468)
|+++|+++-.|..| |..|.+|+++| + +|+++
T Consensus 1 m~~dVvVIGaGiaG-----LsaA~~L~~~G--~~~~V~vl 33 (477)
T 3nks_A 1 MGRTVVVLGGGISG-----LAASYHLSRAP--CPPKVVLV 33 (477)
T ss_dssp -CCEEEEECCBHHH-----HHHHHHHHTSS--SCCEEEEE
T ss_pred CCceEEEECCcHHH-----HHHHHHHHhCC--CCCcEEEE
Confidence 77789988777554 88999999999 9 99999
No 220
>1evy_A Glycerol-3-phosphate dehydrogenase; rossmann fold, oxidoreductase; HET: MYS; 1.75A {Leishmania mexicana} SCOP: a.100.1.6 c.2.1.6 PDB: 1evz_A* 1jdj_A* 1m66_A* 1m67_A* 1n1e_A* 1n1g_A*
Probab=23.65 E-value=37 Score=31.71 Aligned_cols=32 Identities=9% Similarity=0.174 Sum_probs=26.1
Q ss_pred Ccc-eEEEecCCCccCHHHHHHHHHHHHhCCCCcEEEEEe
Q 044031 1 MKK-TIALYPGPAFHHMISMVELGKLILQHRSDVSITILV 39 (468)
Q Consensus 1 m~~-~Iv~~~~~~~GHv~P~l~LA~~L~~~G~~h~Vt~~~ 39 (468)
|++ +|.|+-.|..|. .+|..|+++| |+|+++.
T Consensus 13 m~M~kI~iIG~G~mG~-----~la~~L~~~G--~~V~~~~ 45 (366)
T 1evy_A 13 LYLNKAVVFGSGAFGT-----ALAMVLSKKC--REVCVWH 45 (366)
T ss_dssp CCEEEEEEECCSHHHH-----HHHHHHTTTE--EEEEEEC
T ss_pred hccCeEEEECCCHHHH-----HHHHHHHhCC--CEEEEEE
Confidence 444 899998877774 6899999999 9999984
No 221
>3c24_A Putative oxidoreductase; YP_511008.1, structural genomics, center for structural genomics, JCSG, protein structure INI PSI-2; HET: MSE; 1.62A {Jannaschia SP}
Probab=23.59 E-value=57 Score=29.11 Aligned_cols=31 Identities=13% Similarity=0.165 Sum_probs=24.6
Q ss_pred CcceEEEecC-CCccCHHHHHHHHHHHHhCCCCcEEEEE
Q 044031 1 MKKTIALYPG-PAFHHMISMVELGKLILQHRSDVSITIL 38 (468)
Q Consensus 1 m~~~Iv~~~~-~~~GHv~P~l~LA~~L~~~G~~h~Vt~~ 38 (468)
|+++|.++-. |..| ..+|+.|+++| |+|+++
T Consensus 10 mmm~I~iIG~tG~mG-----~~la~~l~~~g--~~V~~~ 41 (286)
T 3c24_A 10 GPKTVAILGAGGKMG-----ARITRKIHDSA--HHLAAI 41 (286)
T ss_dssp CCCEEEEETTTSHHH-----HHHHHHHHHSS--SEEEEE
T ss_pred cCCEEEEECCCCHHH-----HHHHHHHHhCC--CEEEEE
Confidence 3468998877 6666 46789999999 999977
No 222
>3l7i_A Teichoic acid biosynthesis protein F; GT-B fold, monotopic membrane protein, structural protein; 2.70A {Staphylococcus epidermidis} PDB: 3l7j_A 3l7k_A* 3l7l_A* 3l7m_A*
Probab=23.45 E-value=1.5e+02 Score=30.65 Aligned_cols=116 Identities=9% Similarity=0.011 Sum_probs=72.5
Q ss_pred ecCCCCHHhhhCccCcceEEecCCcchHHHHHHhCCcEEecccccchhhHHHHHHhhcceeeeeccCCcccccCCCCccc
Q 044031 332 VKSWAPQSTILGHESVGGFVTHCGWSSVVEAVTYGVPMIAWPLYAEQFLNSVALVQEMKVAMPMFLNGEEETIGNGEGVV 411 (468)
Q Consensus 332 v~~~~pq~~il~~~~~~~~ithgG~~s~~eal~~GvP~v~~P~~~DQ~~na~~~~~~~g~g~~~~~~~~~~~~~~~~~~~ 411 (468)
+.++.+-.++|..+++ .||=.. +.+.|.+..++|+|......|++.+ +..| ...+.. .+....-.-
T Consensus 603 ~~~~~di~~ll~~aD~--lITDyS-Sv~fD~~~l~kPiif~~~D~~~Y~~-----~~rg--~y~d~~----~~~pg~~~~ 668 (729)
T 3l7i_A 603 VSNYNDVSELFLISDC--LITDYS-SVMFDYGILKRPQFFFAYDIDKYDK-----GLRG--FYMNYM----EDLPGPIYT 668 (729)
T ss_dssp CTTCSCHHHHHHTCSE--EEESSC-THHHHHGGGCCCEEEECTTTTTTTS-----SCCS--BSSCTT----SSSSSCEES
T ss_pred CCCCcCHHHHHHHhCE--EEeech-HHHHhHHhhCCCEEEecCCHHHHhh-----ccCC--cccChh----HhCCCCeEC
Confidence 4456677788888887 999864 7889999999999999876666543 1113 333210 000001124
Q ss_pred cHHHHHHHHHHHhcCchhHHHHHHHHHHHHHHHHhhcCCCCCChHHHHHHHHHHh
Q 044031 412 SAERVEERVRELMMGSEGKALRERSLEMRMMAATAWNNNDGGSSFTAFSNLFDLW 466 (468)
Q Consensus 412 ~~~~l~~av~~~l~~~~~~~~~~~a~~l~~~~~~a~~~~~~g~~~~~~~~~~~~~ 466 (468)
+.++|.++|+....+. ..++++.+++.+.+-.. . +|.++.+.++.+++..
T Consensus 669 ~~~eL~~~i~~~~~~~--~~~~~~~~~~~~~~~~~-~--dg~as~ri~~~i~~~~ 718 (729)
T 3l7i_A 669 EPYGLAKELKNLDKVQ--QQYQEKIDAFYDRFCSV-D--NGKASQYIGDLIHKDI 718 (729)
T ss_dssp SHHHHHHHHTTHHHHH--HHTHHHHHHHHHHHSTT-C--CSCHHHHHHHHHHHHH
T ss_pred CHHHHHHHHhhhhccc--hhHHHHHHHHHHHhCCc-c--CChHHHHHHHHHHhcC
Confidence 6788888888776422 26777777777766653 3 4556666666666543
No 223
>3ppi_A 3-hydroxyacyl-COA dehydrogenase type-2; ssgcid, dehydrogenas mycobacterium avium, structural genomics; 2.00A {Mycobacterium avium}
Probab=23.39 E-value=80 Score=27.88 Aligned_cols=32 Identities=13% Similarity=-0.032 Sum_probs=26.2
Q ss_pred ceEEEecCCCccCHHHHHHHHHHHHhCCCCcEEEEEe
Q 044031 3 KTIALYPGPAFHHMISMVELGKLILQHRSDVSITILV 39 (468)
Q Consensus 3 ~~Iv~~~~~~~GHv~P~l~LA~~L~~~G~~h~Vt~~~ 39 (468)
.++++++.++.| =..++|++|+++| ++|.++.
T Consensus 30 ~k~vlVTGas~G---IG~aia~~l~~~G--~~Vi~~~ 61 (281)
T 3ppi_A 30 GASAIVSGGAGG---LGEATVRRLHADG--LGVVIAD 61 (281)
T ss_dssp TEEEEEETTTSH---HHHHHHHHHHHTT--CEEEEEE
T ss_pred CCEEEEECCCCh---HHHHHHHHHHHCC--CEEEEEe
Confidence 478888877765 4678999999999 9998874
No 224
>4dqx_A Probable oxidoreductase protein; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; 2.00A {Rhizobium etli}
Probab=23.35 E-value=82 Score=27.92 Aligned_cols=33 Identities=6% Similarity=0.080 Sum_probs=26.4
Q ss_pred cceEEEecCCCccCHHHHHHHHHHHHhCCCCcEEEEEe
Q 044031 2 KKTIALYPGPAFHHMISMVELGKLILQHRSDVSITILV 39 (468)
Q Consensus 2 ~~~Iv~~~~~~~GHv~P~l~LA~~L~~~G~~h~Vt~~~ 39 (468)
+.++++++.++.| =..++|++|+++| ++|.++.
T Consensus 26 ~~k~vlVTGas~G---IG~aia~~l~~~G--~~V~~~~ 58 (277)
T 4dqx_A 26 NQRVCIVTGGGSG---IGRATAELFAKNG--AYVVVAD 58 (277)
T ss_dssp TTCEEEEETTTSH---HHHHHHHHHHHTT--CEEEEEE
T ss_pred CCCEEEEECCCcH---HHHHHHHHHHHCC--CEEEEEe
Confidence 3468888877654 4678999999999 9998874
No 225
>4b4k_A N5-carboxyaminoimidazole ribonucleotide mutase; isomerase; 2.50A {Bacillus anthracis}
Probab=23.28 E-value=1.9e+02 Score=23.86 Aligned_cols=53 Identities=9% Similarity=0.038 Sum_probs=34.9
Q ss_pred CcceEEEecCCCccCHHHHHHHHHHHHhCCCCcEEEEEeCCCCCCchhhhhhhhcc
Q 044031 1 MKKTIALYPGPAFHHMISMVELGKLILQHRSDVSITILVPSMPLEESKTCSYINSI 56 (468)
Q Consensus 1 m~~~Iv~~~~~~~GHv~P~l~LA~~L~~~G~~h~Vt~~~~~~~~~~~~~~~~~~~~ 56 (468)
||+.|.++. ++.+|..-+-..++.|.+-|=.|++.++ +..+....+.++....
T Consensus 21 mkp~V~Iim-GS~SD~~v~~~a~~~L~~~gI~~e~~V~--SAHRtp~~l~~~~~~a 73 (181)
T 4b4k_A 21 MKSLVGVIM-GSTSDWETMKYACDILDELNIPYEKKVV--SAHRTPDYMFEYAETA 73 (181)
T ss_dssp -CCSEEEEE-SSGGGHHHHHHHHHHHHHTTCCEEEEEC--CTTTSHHHHHHHHHHT
T ss_pred CCccEEEEE-CCHhHHHHHHHHHHHHHHcCCCeeEEEE--ccccChHHHHHHHHHH
Confidence 666566555 9999999899999999998855677776 4444333344444443
No 226
>3ksu_A 3-oxoacyl-acyl carrier protein reductase; structural genomics, PSI-2, dehydrogenase, protein structure initiative; 2.30A {Oenococcus oeni psu-1}
Probab=23.21 E-value=70 Score=28.06 Aligned_cols=32 Identities=9% Similarity=0.052 Sum_probs=26.5
Q ss_pred ceEEEecCCCccCHHHHHHHHHHHHhCCCCcEEEEEe
Q 044031 3 KTIALYPGPAFHHMISMVELGKLILQHRSDVSITILV 39 (468)
Q Consensus 3 ~~Iv~~~~~~~GHv~P~l~LA~~L~~~G~~h~Vt~~~ 39 (468)
.++++++.++.| =..++|++|+++| ++|.++.
T Consensus 11 ~k~vlVTGas~G---IG~aia~~la~~G--~~V~~~~ 42 (262)
T 3ksu_A 11 NKVIVIAGGIKN---LGALTAKTFALES--VNLVLHY 42 (262)
T ss_dssp TCEEEEETCSSH---HHHHHHHHHTTSS--CEEEEEE
T ss_pred CCEEEEECCCch---HHHHHHHHHHHCC--CEEEEEe
Confidence 478889977766 4688999999999 9998874
No 227
>4dgk_A Phytoene dehydrogenase; the FAD/NAD(P)-binding rossmann fold, oxidoreductase; 2.35A {Pantoea ananatis}
Probab=23.16 E-value=34 Score=33.41 Aligned_cols=30 Identities=10% Similarity=0.054 Sum_probs=24.3
Q ss_pred cceEEEecCCCccCHHHHHHHHHHHHhCCCCcEEEEE
Q 044031 2 KKTIALYPGPAFHHMISMVELGKLILQHRSDVSITIL 38 (468)
Q Consensus 2 ~~~Iv~~~~~~~GHv~P~l~LA~~L~~~G~~h~Vt~~ 38 (468)
|+||+++-.|..| |.-|..|+++| ++|+++
T Consensus 1 Mk~VvVIGaG~~G-----L~aA~~La~~G--~~V~Vl 30 (501)
T 4dgk_A 1 MKPTTVIGAGFGG-----LALAIRLQAAG--IPVLLL 30 (501)
T ss_dssp CCCEEEECCHHHH-----HHHHHHHHHTT--CCEEEE
T ss_pred CCCEEEECCcHHH-----HHHHHHHHHCC--CcEEEE
Confidence 1478888766554 88899999999 999999
No 228
>1d7o_A Enoyl-[acyl-carrier protein] reductase (NADH) PRE; triclosan, enoyl reductase, oxidoreductase; HET: NAD TCL; 1.90A {Brassica napus} SCOP: c.2.1.2 PDB: 1eno_A* 1enp_A* 1cwu_A*
Probab=22.98 E-value=92 Score=27.76 Aligned_cols=32 Identities=16% Similarity=-0.006 Sum_probs=25.3
Q ss_pred ceEEEecCCC--ccCHHHHHHHHHHHHhCCCCcEEEEEe
Q 044031 3 KTIALYPGPA--FHHMISMVELGKLILQHRSDVSITILV 39 (468)
Q Consensus 3 ~~Iv~~~~~~--~GHv~P~l~LA~~L~~~G~~h~Vt~~~ 39 (468)
.++++++.++ .| =..++|++|+++| ++|.++.
T Consensus 8 ~k~~lVTGas~~~G---IG~aia~~la~~G--~~V~~~~ 41 (297)
T 1d7o_A 8 GKRAFIAGIADDNG---YGWAVAKSLAAAG--AEILVGT 41 (297)
T ss_dssp TCEEEEECCSSSSS---HHHHHHHHHHHTT--CEEEEEE
T ss_pred CCEEEEECCCCCCC---hHHHHHHHHHHCC--CeEEEee
Confidence 4688888776 44 3578999999999 9998873
No 229
>3kkl_A Probable chaperone protein HSP33; peptidase, heat shock protein, hydrolase, protease, stress response; 2.03A {Saccharomyces cerevisiae} PDB: 3mii_A*
Probab=22.82 E-value=1.2e+02 Score=26.35 Aligned_cols=37 Identities=5% Similarity=0.070 Sum_probs=26.8
Q ss_pred ceEEEecCCCcc-----------CHHHHHHHHHHHHhCCCCcEEEEEeCC
Q 044031 3 KTIALYPGPAFH-----------HMISMVELGKLILQHRSDVSITILVPS 41 (468)
Q Consensus 3 ~~Iv~~~~~~~G-----------Hv~P~l~LA~~L~~~G~~h~Vt~~~~~ 41 (468)
++|+++.....+ ...=++.....|.++| ++|+++++.
T Consensus 4 ~kvlivlt~~~~~~~~~g~~tG~~~~E~~~p~~~l~~aG--~~V~iaS~~ 51 (244)
T 3kkl_A 4 KRALISLTSYHGPFYKDGAKTGVFVVEILRSFDTFEKHG--FEVDFVSET 51 (244)
T ss_dssp CEEEEECCCCCCCCSTTSCCCCBCHHHHHHHHHHHHTTT--CEEEEEESS
T ss_pred CEEEEEECCCCcccCCCCCcCcccHHHHHHHHHHHHHCC--CEEEEEeCC
Confidence 467777665432 2255677788899999 999999764
No 230
>1ydn_A Hydroxymethylglutaryl-COA lyase; TIM-barrel protein, structural genomics, PSI, protein struct initiative; 2.30A {Brucella melitensis}
Probab=22.81 E-value=4e+02 Score=23.61 Aligned_cols=26 Identities=4% Similarity=-0.119 Sum_probs=21.9
Q ss_pred CCHHHHHHHHHHHHhCCCcEEEEEeC
Q 044031 283 FSAPQLKEIAIGLERSNQRFLWVVRN 308 (468)
Q Consensus 283 ~~~~~~~~~~~al~~~~~~~l~~~~~ 308 (468)
++.+...+++++|.+.|.+.|-+...
T Consensus 23 ~~~e~k~~i~~~L~~~Gv~~IE~g~~ 48 (295)
T 1ydn_A 23 VPTADKIALINRLSDCGYARIEATSF 48 (295)
T ss_dssp CCHHHHHHHHHHHTTTTCSEEEEEEC
T ss_pred cCHHHHHHHHHHHHHcCcCEEEEccC
Confidence 67888899999999999998877653
No 231
>3ia7_A CALG4; glycosysltransferase, calicheamicin, enediyne, transf; 1.91A {Micromonospora echinospora}
Probab=22.78 E-value=1.3e+02 Score=27.73 Aligned_cols=35 Identities=17% Similarity=0.271 Sum_probs=24.3
Q ss_pred eEEeccCCCcCCCHHHHHHHHHHHHhCCCcEEEEEeC
Q 044031 272 VVFLCFGSRGTFSAPQLKEIAIGLERSNQRFLWVVRN 308 (468)
Q Consensus 272 ~v~vs~GS~~~~~~~~~~~~~~al~~~~~~~l~~~~~ 308 (468)
++++++|+.+. ...+..++++|.+.|..+.+.+..
T Consensus 7 il~~~~~~~Gh--v~~~~~La~~L~~~GheV~v~~~~ 41 (402)
T 3ia7_A 7 ILFANVQGHGH--VYPSLGLVSELARRGHRITYVTTP 41 (402)
T ss_dssp EEEECCSSHHH--HHHHHHHHHHHHHTTCEEEEEECH
T ss_pred EEEEeCCCCcc--cccHHHHHHHHHhCCCEEEEEcCH
Confidence 77777776542 233566888888888888777653
No 232
>3lf2_A Short chain oxidoreductase Q9HYA2; SDR, SCOR, rossmann fold; HET: NAP; 2.30A {Pseudomonas aeruginosa} PDB: 3lf1_A*
Probab=22.62 E-value=87 Score=27.40 Aligned_cols=32 Identities=13% Similarity=0.192 Sum_probs=26.2
Q ss_pred ceEEEecCCCccCHHHHHHHHHHHHhCCCCcEEEEEe
Q 044031 3 KTIALYPGPAFHHMISMVELGKLILQHRSDVSITILV 39 (468)
Q Consensus 3 ~~Iv~~~~~~~GHv~P~l~LA~~L~~~G~~h~Vt~~~ 39 (468)
.++++++.++.| =..++|++|+++| ++|.++.
T Consensus 8 ~k~~lVTGas~G---IG~aia~~l~~~G--~~V~~~~ 39 (265)
T 3lf2_A 8 EAVAVVTGGSSG---IGLATVELLLEAG--AAVAFCA 39 (265)
T ss_dssp TCEEEEETCSSH---HHHHHHHHHHHTT--CEEEEEE
T ss_pred CCEEEEeCCCCh---HHHHHHHHHHHCC--CEEEEEe
Confidence 478888877664 4678999999999 9998874
No 233
>3is3_A 17BETA-hydroxysteroid dehydrogenase; short chain dehydrogenase/REDU SDR, fungi, oxidoreductase; HET: GOL; 1.48A {Cochliobolus lunatus} PDB: 3qwf_A* 3qwh_A* 3qwi_A* 3itd_A
Probab=22.56 E-value=1.3e+02 Score=26.41 Aligned_cols=33 Identities=9% Similarity=0.038 Sum_probs=25.7
Q ss_pred ceEEEecCCCccCHHHHHHHHHHHHhCCCCcEEEEEeC
Q 044031 3 KTIALYPGPAFHHMISMVELGKLILQHRSDVSITILVP 40 (468)
Q Consensus 3 ~~Iv~~~~~~~GHv~P~l~LA~~L~~~G~~h~Vt~~~~ 40 (468)
.++++++.++.| =..++|++|+++| ++|.++..
T Consensus 18 ~k~~lVTGas~g---IG~aia~~l~~~G--~~V~~~~~ 50 (270)
T 3is3_A 18 GKVALVTGSGRG---IGAAVAVHLGRLG--AKVVVNYA 50 (270)
T ss_dssp TCEEEESCTTSH---HHHHHHHHHHHTT--CEEEEEES
T ss_pred CCEEEEECCCch---HHHHHHHHHHHCC--CEEEEEcC
Confidence 468888866653 3678999999999 99988743
No 234
>3f1l_A Uncharacterized oxidoreductase YCIK; E. coli, NADP+,; 0.95A {Escherichia coli K12} SCOP: c.2.1.0 PDB: 3f1k_A 3e9q_A* 3f5q_A 3gz4_A* 3f5s_A 3gy0_A* 3iah_A* 3g1t_A
Probab=22.55 E-value=89 Score=27.10 Aligned_cols=32 Identities=16% Similarity=0.060 Sum_probs=25.5
Q ss_pred ceEEEecCCCccCHHHHHHHHHHHHhCCCCcEEEEEe
Q 044031 3 KTIALYPGPAFHHMISMVELGKLILQHRSDVSITILV 39 (468)
Q Consensus 3 ~~Iv~~~~~~~GHv~P~l~LA~~L~~~G~~h~Vt~~~ 39 (468)
.++++++.++.| =..++|++|+++| ++|.++.
T Consensus 12 ~k~vlVTGas~g---IG~aia~~l~~~G--~~V~~~~ 43 (252)
T 3f1l_A 12 DRIILVTGASDG---IGREAAMTYARYG--ATVILLG 43 (252)
T ss_dssp TCEEEEESTTSH---HHHHHHHHHHHTT--CEEEEEE
T ss_pred CCEEEEeCCCCh---HHHHHHHHHHHCC--CEEEEEe
Confidence 468888876653 3678999999999 9998874
No 235
>4da9_A Short-chain dehydrogenase/reductase; structural genomics, protein structure initiative, PSI-biology; 2.50A {Sinorhizobium meliloti}
Probab=22.49 E-value=1.3e+02 Score=26.64 Aligned_cols=32 Identities=13% Similarity=0.160 Sum_probs=25.8
Q ss_pred ceEEEecCCCccCHHHHHHHHHHHHhCCCCcEEEEEe
Q 044031 3 KTIALYPGPAFHHMISMVELGKLILQHRSDVSITILV 39 (468)
Q Consensus 3 ~~Iv~~~~~~~GHv~P~l~LA~~L~~~G~~h~Vt~~~ 39 (468)
.++++++.++.| =..++|++|+++| ++|.++.
T Consensus 29 ~k~~lVTGas~G---IG~aia~~la~~G--~~V~~~~ 60 (280)
T 4da9_A 29 RPVAIVTGGRRG---IGLGIARALAASG--FDIAITG 60 (280)
T ss_dssp CCEEEEETTTSH---HHHHHHHHHHHTT--CEEEEEE
T ss_pred CCEEEEecCCCH---HHHHHHHHHHHCC--CeEEEEe
Confidence 368888876654 4678999999999 9998885
No 236
>2cob_A LCOR protein; MLR2, KIAA1795, helix-turn-helix, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: a.4.1.15
Probab=22.48 E-value=1.2e+02 Score=20.61 Aligned_cols=27 Identities=19% Similarity=0.249 Sum_probs=21.3
Q ss_pred ccHHHHHHHHHHHhcCchhHHHHHHHHHH
Q 044031 411 VSAERVEERVRELMMGSEGKALRERSLEM 439 (468)
Q Consensus 411 ~~~~~l~~av~~~l~~~~~~~~~~~a~~l 439 (468)
.++++|..||+.|.++. .+++..|+.+
T Consensus 14 Yte~~L~~Ai~aVr~g~--mS~~~Aak~y 40 (70)
T 2cob_A 14 YNSEILEEAISVVMSGK--MSVSKAQSIY 40 (70)
T ss_dssp CCHHHHHHHHHHHHTTS--SCHHHHHHHH
T ss_pred cCHHHHHHHHHHHHcCC--ccHHHHHHHh
Confidence 89999999999998873 2666666654
No 237
>3grp_A 3-oxoacyl-(acyl carrierprotein) reductase; structural genomics, oxidoreductase, S structural genomics center for infectious disease, ssgcid; 2.09A {Bartonella henselae} PDB: 3enn_A 3emk_A
Probab=22.47 E-value=91 Score=27.40 Aligned_cols=32 Identities=9% Similarity=-0.027 Sum_probs=25.9
Q ss_pred ceEEEecCCCccCHHHHHHHHHHHHhCCCCcEEEEEe
Q 044031 3 KTIALYPGPAFHHMISMVELGKLILQHRSDVSITILV 39 (468)
Q Consensus 3 ~~Iv~~~~~~~GHv~P~l~LA~~L~~~G~~h~Vt~~~ 39 (468)
.++++++.++.| =..++|++|+++| ++|.++.
T Consensus 27 gk~vlVTGas~g---IG~aia~~la~~G--~~V~~~~ 58 (266)
T 3grp_A 27 GRKALVTGATGG---IGEAIARCFHAQG--AIVGLHG 58 (266)
T ss_dssp TCEEEESSTTSH---HHHHHHHHHHHTT--CEEEEEE
T ss_pred CCEEEEeCCCcH---HHHHHHHHHHHCC--CEEEEEe
Confidence 468888876654 4678999999999 9998874
No 238
>3tfo_A Putative 3-oxoacyl-(acyl-carrier-protein) reducta; structural genomics, PSI-biology, NEW YORK structural genomi research consortium; 2.08A {Sinorhizobium meliloti}
Probab=22.46 E-value=91 Score=27.41 Aligned_cols=33 Identities=9% Similarity=-0.018 Sum_probs=26.2
Q ss_pred cceEEEecCCCccCHHHHHHHHHHHHhCCCCcEEEEEe
Q 044031 2 KKTIALYPGPAFHHMISMVELGKLILQHRSDVSITILV 39 (468)
Q Consensus 2 ~~~Iv~~~~~~~GHv~P~l~LA~~L~~~G~~h~Vt~~~ 39 (468)
+.++++++.++.| =..++|++|+++| ++|.++.
T Consensus 3 ~~k~~lVTGas~G---IG~aia~~la~~G--~~V~~~~ 35 (264)
T 3tfo_A 3 MDKVILITGASGG---IGEGIARELGVAG--AKILLGA 35 (264)
T ss_dssp TTCEEEESSTTSH---HHHHHHHHHHHTT--CEEEEEE
T ss_pred CCCEEEEeCCccH---HHHHHHHHHHHCC--CEEEEEE
Confidence 4578888876654 3678999999999 9998874
No 239
>2ydy_A Methionine adenosyltransferase 2 subunit beta; oxidoreductase; 2.25A {Homo sapiens} PDB: 2ydx_A
Probab=22.38 E-value=80 Score=28.27 Aligned_cols=33 Identities=12% Similarity=-0.063 Sum_probs=23.1
Q ss_pred CcceEEEecCCCccCHHHHHHHHHHHHhCCCCcEEEEEe
Q 044031 1 MKKTIALYPGPAFHHMISMVELGKLILQHRSDVSITILV 39 (468)
Q Consensus 1 m~~~Iv~~~~~~~GHv~P~l~LA~~L~~~G~~h~Vt~~~ 39 (468)
|.++|++. |+.|.+ ...|+++|+++| |+|+.+.
T Consensus 1 m~~~vlVt--GatG~i--G~~l~~~L~~~g--~~V~~~~ 33 (315)
T 2ydy_A 1 MNRRVLVT--GATGLL--GRAVHKEFQQNN--WHAVGCG 33 (315)
T ss_dssp -CCEEEEE--TTTSHH--HHHHHHHHHTTT--CEEEEEC
T ss_pred CCCeEEEE--CCCcHH--HHHHHHHHHhCC--CeEEEEc
Confidence 65555443 555655 457899999999 9999884
No 240
>3gem_A Short chain dehydrogenase; structural genomics, APC65077, oxidoreductase, PSI-2, protein structure initiative; 1.83A {Pseudomonas syringae PV}
Probab=22.36 E-value=73 Score=27.93 Aligned_cols=33 Identities=15% Similarity=0.131 Sum_probs=26.1
Q ss_pred ceEEEecCCCccCHHHHHHHHHHHHhCCCCcEEEEEeC
Q 044031 3 KTIALYPGPAFHHMISMVELGKLILQHRSDVSITILVP 40 (468)
Q Consensus 3 ~~Iv~~~~~~~GHv~P~l~LA~~L~~~G~~h~Vt~~~~ 40 (468)
.++++++.++.| =..++|++|+++| ++|.++.-
T Consensus 27 ~k~vlVTGas~g---IG~aia~~l~~~G--~~V~~~~r 59 (260)
T 3gem_A 27 SAPILITGASQR---VGLHCALRLLEHG--HRVIISYR 59 (260)
T ss_dssp CCCEEESSTTSH---HHHHHHHHHHHTT--CCEEEEES
T ss_pred CCEEEEECCCCH---HHHHHHHHHHHCC--CEEEEEeC
Confidence 467888876654 4678999999999 99998854
No 241
>3irs_A Uncharacterized protein BB4693; structural genomics, PSI-2, protein structure initiative, TI protein; HET: GOL; 1.76A {Bordetella bronchiseptica} PDB: 3k4w_A
Probab=22.32 E-value=1.2e+02 Score=27.08 Aligned_cols=135 Identities=10% Similarity=0.070 Sum_probs=67.1
Q ss_pred CCHHHHHHHHHHHHhCCCcEEEEEeCCCCccccCCChhHHhhccCCCeEecCCCCHHhhh-CccCcceEEecCCcchHHH
Q 044031 283 FSAPQLKEIAIGLERSNQRFLWVVRNPSNAAEAELPEGFLERTKERGLVVKSWAPQSTIL-GHESVGGFVTHCGWSSVVE 361 (468)
Q Consensus 283 ~~~~~~~~~~~al~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~pq~~il-~~~~~~~~ithgG~~s~~e 361 (468)
.+.+.+..+.+.+++.+.+++.-.+.... . ...+. .-..-..++ .+|+++++|.|||+....+
T Consensus 135 ~~d~~~~~~~~~a~e~glpv~iH~~~~~~---~--~~~~~-----------~p~~~~~v~~~~P~l~ivl~H~G~~~~~~ 198 (291)
T 3irs_A 135 VDDRRLYPLYAFCEDNGIPVIMMTGGNAG---P--DITYT-----------NPEHIDRVLGDFPDLTVVSSHGNWPWVQE 198 (291)
T ss_dssp TTCGGGHHHHHHHHHTTCCEEEECSSSCS---S--SGGGG-----------CHHHHHHHHHHCTTCCEEEEGGGTTCHHH
T ss_pred CCCHHHHHHHHHHHHcCCeEEEeCCCCCC---C--CCccC-----------CHHHHHHHHHHCCCCEEEeecCCcccHHH
Confidence 34566788888888899987765543200 0 00000 000012223 4688888999999988777
Q ss_pred HHHh--CCcEEeccccc---chhhH--HHHHHhhcceeeeeccCCcccccCCCCccccHHHHHHHHHHH-hcCch-hHHH
Q 044031 362 AVTY--GVPMIAWPLYA---EQFLN--SVALVQEMKVAMPMFLNGEEETIGNGEGVVSAERVEERVREL-MMGSE-GKAL 432 (468)
Q Consensus 362 al~~--GvP~v~~P~~~---DQ~~n--a~~~~~~~g~g~~~~~~~~~~~~~~~~~~~~~~~l~~av~~~-l~~~~-~~~~ 432 (468)
++.. ..|-+.+-..+ ..+.+ -..+.+..|.-..+- +.+-...+.....+.+.++ ++.++ .+-+
T Consensus 199 ~~~l~~~~~nvy~~~Sg~~~~~~~~~~~~~~~~~~g~drllf--------gSD~P~~~~~~~~~~~~~l~l~~e~~~~i~ 270 (291)
T 3irs_A 199 IIHVAFRRPNLYLSPDMYLYNLPGHADFIQAANSFLADRMLF--------GTAYPMCPLKEYTEWFLTLPIKPDAMEKIL 270 (291)
T ss_dssp HHHHHHHCTTEEEECGGGGSSSTTHHHHHHHHTTGGGGTBCC--------CCCBTSSCHHHHHHHHHTSSCCHHHHHHHH
T ss_pred HHHHHhHCCCeEecHHHHhccCCCHHHHHHHHHHhCcceEEE--------ecCCCCCCHHHHHHHHHHCCCCHHHHHHHH
Confidence 7663 22333332211 11211 112223345443332 3332334555555555554 22222 4567
Q ss_pred HHHHHHHHH
Q 044031 433 RERSLEMRM 441 (468)
Q Consensus 433 ~~~a~~l~~ 441 (468)
.+||+++=.
T Consensus 271 ~~NA~rl~~ 279 (291)
T 3irs_A 271 HGNAERLLA 279 (291)
T ss_dssp THHHHHHHH
T ss_pred HHHHHHHhC
Confidence 777777643
No 242
>2vzf_A NADH-dependent FMN reductase; oxidoreductase; 2.50A {Edta-degrading bacterium BNC1} PDB: 2vzh_A* 2vzj_A*
Probab=22.23 E-value=1.1e+02 Score=25.43 Aligned_cols=36 Identities=11% Similarity=0.050 Sum_probs=24.6
Q ss_pred CcceEEEecCCC--ccCHHHHHH-HHHH-HHhCCCCcEEEEE
Q 044031 1 MKKTIALYPGPA--FHHMISMVE-LGKL-ILQHRSDVSITIL 38 (468)
Q Consensus 1 m~~~Iv~~~~~~--~GHv~P~l~-LA~~-L~~~G~~h~Vt~~ 38 (468)
||++|+++.... .|+..-+.. +++. |.++| ++|.++
T Consensus 1 mMmkilii~gS~r~~g~t~~la~~i~~~~l~~~g--~~v~~~ 40 (197)
T 2vzf_A 1 MTYSIVAISGSPSRNSTTAKLAEYALAHVLARSD--SQGRHI 40 (197)
T ss_dssp CCEEEEEEECCSSTTCHHHHHHHHHHHHHHHHSS--EEEEEE
T ss_pred CCceEEEEECCCCCCChHHHHHHHHHHHHHHHCC--CeEEEE
Confidence 556777776543 476666555 4566 77889 999888
No 243
>4eso_A Putative oxidoreductase; NADP, structural genomics, PSI-biology, NEW structural genomics research consortium, nysgrc; HET: MSE NAP; 1.91A {Sinorhizobium meliloti} PDB: 3vc7_A
Probab=22.22 E-value=90 Score=27.17 Aligned_cols=32 Identities=6% Similarity=-0.003 Sum_probs=25.9
Q ss_pred ceEEEecCCCccCHHHHHHHHHHHHhCCCCcEEEEEe
Q 044031 3 KTIALYPGPAFHHMISMVELGKLILQHRSDVSITILV 39 (468)
Q Consensus 3 ~~Iv~~~~~~~GHv~P~l~LA~~L~~~G~~h~Vt~~~ 39 (468)
.++++++.++.| =..++|++|+++| ++|.++.
T Consensus 8 gk~~lVTGas~g---IG~a~a~~l~~~G--~~V~~~~ 39 (255)
T 4eso_A 8 GKKAIVIGGTHG---MGLATVRRLVEGG--AEVLLTG 39 (255)
T ss_dssp TCEEEEETCSSH---HHHHHHHHHHHTT--CEEEEEE
T ss_pred CCEEEEECCCCH---HHHHHHHHHHHCC--CEEEEEe
Confidence 368888877654 4678999999999 9998884
No 244
>4dik_A Flavoprotein; TM0755, electron transport, DI-iron protein; 1.75A {Thermotoga maritima} PDB: 4dil_A 1vme_A*
Probab=22.15 E-value=51 Score=31.51 Aligned_cols=46 Identities=13% Similarity=0.100 Sum_probs=33.5
Q ss_pred hhHHhhcCCCCCceEEeccCCCcCCCHHHHHHHHHHHHhCCCcEEE
Q 044031 259 DCLTWLDSQPSGSVVFLCFGSRGTFSAPQLKEIAIGLERSNQRFLW 304 (468)
Q Consensus 259 ~l~~~l~~~~~~~~v~vs~GS~~~~~~~~~~~~~~al~~~~~~~l~ 304 (468)
...+|-...+...-|.|-++|+...+......++++|+..|...+.
T Consensus 254 ~Y~~w~~~~~~~~~v~I~Y~S~yGnTe~mA~~ia~gl~~~Gv~~~~ 299 (410)
T 4dik_A 254 HYVSVAKGDPKKGKVTVIYDSMYGFVENVMKKAIDSLKEKGFTPVV 299 (410)
T ss_dssp HHHHHHHTCCCTTEEEEEEECSSSHHHHHHHHHHHHHHHTTCEEEE
T ss_pred HHHHhhcccccccceeeEEecccChHHHHHHHHHHHHHhcCCceEE
Confidence 3445655444444677889999877777778899999999988654
No 245
>1uls_A Putative 3-oxoacyl-acyl carrier protein reductase; structural genomics, riken structural genomics/proteomics initiative, RSGI; 2.40A {Thermus thermophilus} SCOP: c.2.1.2
Probab=22.10 E-value=92 Score=26.84 Aligned_cols=33 Identities=15% Similarity=0.050 Sum_probs=25.3
Q ss_pred cceEEEecCCCccCHHHHHHHHHHHHhCCCCcEEEEEe
Q 044031 2 KKTIALYPGPAFHHMISMVELGKLILQHRSDVSITILV 39 (468)
Q Consensus 2 ~~~Iv~~~~~~~GHv~P~l~LA~~L~~~G~~h~Vt~~~ 39 (468)
+.++++++.++.| =..++|++|+++| ++|+++.
T Consensus 4 ~~k~vlVTGas~g---iG~~ia~~l~~~G--~~V~~~~ 36 (245)
T 1uls_A 4 KDKAVLITGAAHG---IGRATLELFAKEG--ARLVACD 36 (245)
T ss_dssp TTCEEEEESTTSH---HHHHHHHHHHHTT--CEEEEEE
T ss_pred CCCEEEEECCCCH---HHHHHHHHHHHCC--CEEEEEe
Confidence 3467788866543 3678999999999 9998874
No 246
>4ds3_A Phosphoribosylglycinamide formyltransferase; structural genomics, seattle structural genomics center for infectious disease, ssgcid; 1.85A {Brucella melitensis BV}
Probab=21.97 E-value=2.1e+02 Score=24.25 Aligned_cols=69 Identities=16% Similarity=0.183 Sum_probs=48.0
Q ss_pred HHHHHHHHhCCCcEEEEEeCCCCccccCCChhHHhhccCCCeEecCCCCHHhhhCccCcceEEecCCcchHHHHHHhCCc
Q 044031 289 KEIAIGLERSNQRFLWVVRNPSNAAEAELPEGFLERTKERGLVVKSWAPQSTILGHESVGGFVTHCGWSSVVEAVTYGVP 368 (468)
Q Consensus 289 ~~~~~al~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~pq~~il~~~~~~~~ithgG~~s~~eal~~GvP 368 (468)
.++.+.|+..+..++.+.+.. ..+|+.+.+......+-+ |++. .=...|+..+..|+.+|+.
T Consensus 76 ~~~~~~l~~~~~Dliv~agy~-----~il~~~~l~~~~~~~iNi-----------HpSL--LP~yrG~~pi~~Ai~~G~~ 137 (209)
T 4ds3_A 76 DAILAALDVLKPDIICLAGYM-----RLLSGRFIAPYEGRILNI-----------HPSL--LPLFPGLHTHQRALDAGMK 137 (209)
T ss_dssp HHHHHHHHHHCCSEEEESSCC-----SCCCHHHHGGGTTCEEEE-----------ESSC--TTSSCSSCHHHHHHHTTCS
T ss_pred HHHHHHHHhcCCCEEEEeccc-----cCcCHHHHhhccCCeEEE-----------CCcc--ccCCCChhHHHHHHHcCCC
Confidence 457888888888888887764 557777765433222222 4554 4456789999999999999
Q ss_pred EEecccc
Q 044031 369 MIAWPLY 375 (468)
Q Consensus 369 ~v~~P~~ 375 (468)
..++=.+
T Consensus 138 ~tGvTvh 144 (209)
T 4ds3_A 138 LAGCTVH 144 (209)
T ss_dssp EEEEEEE
T ss_pred eEEEEEE
Confidence 8877653
No 247
>1mio_B Nitrogenase molybdenum iron protein (beta chain); HET: HCA CFM CLP; 3.00A {Clostridium pasteurianum} SCOP: c.92.2.3
Probab=21.97 E-value=60 Score=31.48 Aligned_cols=32 Identities=25% Similarity=0.227 Sum_probs=26.2
Q ss_pred HHHHHHhhhcCCCccEEEe-cCcHHHhhhCCCCeEEE
Q 044031 96 VFQALENISLTSKILSFII-TSTTSFSYHPNIPTYTY 131 (468)
Q Consensus 96 l~~ll~~~~~~~~pD~vI~-~~~~~vA~~lgIP~i~~ 131 (468)
+++++++. +||++|. .....+|+++|||++.+
T Consensus 377 l~~~i~~~----~pDl~ig~~~~~~~a~k~gip~~~~ 409 (458)
T 1mio_B 377 VHQWIKNE----GVDLLISNTYGKFIAREENIPFVRF 409 (458)
T ss_dssp HHHHHHHS----CCSEEEESGGGHHHHHHHTCCEEEC
T ss_pred HHHHHHhc----CCCEEEeCcchHHHHHHcCCCEEEe
Confidence 45556666 9999999 77888999999998864
No 248
>3l77_A Short-chain alcohol dehydrogenase; oxidoreductase; HET: NJP PG4; 1.60A {Thermococcus sibiricus} SCOP: c.2.1.0 PDB: 3tn7_A*
Probab=21.95 E-value=97 Score=26.36 Aligned_cols=32 Identities=6% Similarity=0.120 Sum_probs=25.0
Q ss_pred eEEEecCCCccCHHHHHHHHHHHHhCCCCcEEEEEeC
Q 044031 4 TIALYPGPAFHHMISMVELGKLILQHRSDVSITILVP 40 (468)
Q Consensus 4 ~Iv~~~~~~~GHv~P~l~LA~~L~~~G~~h~Vt~~~~ 40 (468)
++++++.++.| =..++|++|+++| ++|.++.-
T Consensus 3 k~vlITGas~g---IG~~ia~~l~~~G--~~V~~~~r 34 (235)
T 3l77_A 3 KVAVITGASRG---IGEAIARALARDG--YALALGAR 34 (235)
T ss_dssp CEEEEESCSSH---HHHHHHHHHHHTT--CEEEEEES
T ss_pred CEEEEECCCcH---HHHHHHHHHHHCC--CEEEEEeC
Confidence 47788866654 4678999999999 99988743
No 249
>3e9m_A Oxidoreductase, GFO/IDH/MOCA family; GFO/LDH/MOCA, PSI-II, dimeric dihydodiol dehydrogenase, structural genomics; 2.70A {Enterococcus faecalis}
Probab=21.89 E-value=4.4e+02 Score=23.69 Aligned_cols=109 Identities=11% Similarity=0.062 Sum_probs=56.7
Q ss_pred eEEeccCCCcCCCHHHHHHHHHHHHhC-CCcEEEEEeCCCCccccCCChhHHhhccCCCeEecCCCCHHhhhCccCcceE
Q 044031 272 VVFLCFGSRGTFSAPQLKEIAIGLERS-NQRFLWVVRNPSNAAEAELPEGFLERTKERGLVVKSWAPQSTILGHESVGGF 350 (468)
Q Consensus 272 ~v~vs~GS~~~~~~~~~~~~~~al~~~-~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~pq~~il~~~~~~~~ 350 (468)
+.+|+.|.++ ...+.+|... +..++.++.... + ..+.+.++. ++ ..-+-...++|..++++++
T Consensus 8 igiiG~G~~g-------~~~~~~l~~~~~~~l~av~d~~~----~-~~~~~~~~~---~~-~~~~~~~~~ll~~~~~D~V 71 (330)
T 3e9m_A 8 YGIMSTAQIV-------PRFVAGLRESAQAEVRGIASRRL----E-NAQKMAKEL---AI-PVAYGSYEELCKDETIDII 71 (330)
T ss_dssp EEECSCCTTH-------HHHHHHHHHSSSEEEEEEBCSSS----H-HHHHHHHHT---TC-CCCBSSHHHHHHCTTCSEE
T ss_pred EEEECchHHH-------HHHHHHHHhCCCcEEEEEEeCCH----H-HHHHHHHHc---CC-CceeCCHHHHhcCCCCCEE
Confidence 7788888886 3456666664 455554444320 0 001222221 11 1134566778876666656
Q ss_pred EecCCcch----HHHHHHhCCcEEe-ccccc--chhhHHHHHHhhcceeeeec
Q 044031 351 VTHCGWSS----VVEAVTYGVPMIA-WPLYA--EQFLNSVALVQEMKVAMPMF 396 (468)
Q Consensus 351 ithgG~~s----~~eal~~GvP~v~-~P~~~--DQ~~na~~~~~~~g~g~~~~ 396 (468)
+--.-... +.+++.+|+++++ -|+.. ++-.-...++++.|+-+.+.
T Consensus 72 ~i~tp~~~h~~~~~~al~~gk~vl~EKP~~~~~~e~~~l~~~a~~~g~~~~v~ 124 (330)
T 3e9m_A 72 YIPTYNQGHYSAAKLALSQGKPVLLEKPFTLNAAEAEELFAIAQEQGVFLMEA 124 (330)
T ss_dssp EECCCGGGHHHHHHHHHHTTCCEEECSSCCSSHHHHHHHHHHHHHTTCCEEEC
T ss_pred EEcCCCHHHHHHHHHHHHCCCeEEEeCCCCCCHHHHHHHHHHHHHcCCeEEEE
Confidence 64444333 6778999998876 36543 33333333333335544444
No 250
>3zv4_A CIS-2,3-dihydrobiphenyl-2,3-DIOL dehydrogenase; oxidoreductase, short chain dehydrogenase/oxidoreductase, SD comamonas testosteroni; 1.80A {Pandoraea pnomenusa} SCOP: c.2.1.2 PDB: 2y99_A* 3zv3_A 2y93_A 3zv5_A* 3zv6_A* 1bdb_A*
Probab=21.89 E-value=90 Score=27.65 Aligned_cols=33 Identities=18% Similarity=0.125 Sum_probs=26.6
Q ss_pred cceEEEecCCCccCHHHHHHHHHHHHhCCCCcEEEEEe
Q 044031 2 KKTIALYPGPAFHHMISMVELGKLILQHRSDVSITILV 39 (468)
Q Consensus 2 ~~~Iv~~~~~~~GHv~P~l~LA~~L~~~G~~h~Vt~~~ 39 (468)
+.++++++.++.| =..++|++|+++| ++|.++.
T Consensus 4 ~gk~~lVTGas~G---IG~aia~~la~~G--~~V~~~~ 36 (281)
T 3zv4_A 4 TGEVALITGGASG---LGRALVDRFVAEG--ARVAVLD 36 (281)
T ss_dssp TTCEEEEETCSSH---HHHHHHHHHHHTT--CEEEEEE
T ss_pred CCCEEEEECCCcH---HHHHHHHHHHHCc--CEEEEEe
Confidence 3578888877654 4678999999999 9998884
No 251
>3c7a_A Octopine dehydrogenase; L) stereospecific opine dehydrogenas, oxidorecutase, oxidoreductase; HET: NAD; 2.10A {Pecten maximus} PDB: 3c7c_B* 3c7d_B* 3iqd_B*
Probab=21.85 E-value=38 Score=32.14 Aligned_cols=32 Identities=22% Similarity=0.306 Sum_probs=25.4
Q ss_pred CcceEEEecCCCccCHHHHHHHHHHHHh-CCCCcEEEEEe
Q 044031 1 MKKTIALYPGPAFHHMISMVELGKLILQ-HRSDVSITILV 39 (468)
Q Consensus 1 m~~~Iv~~~~~~~GHv~P~l~LA~~L~~-~G~~h~Vt~~~ 39 (468)
|+++|+++-.|+.|. .+|..|++ .| |+|+++.
T Consensus 1 ~~mkI~ViGaG~~G~-----~~a~~La~~~G--~~V~~~~ 33 (404)
T 3c7a_A 1 MTVKVCVCGGGNGAH-----TLSGLAASRDG--VEVRVLT 33 (404)
T ss_dssp -CEEEEEECCSHHHH-----HHHHHHTTSTT--EEEEEEC
T ss_pred CCceEEEECCCHHHH-----HHHHHHHhCCC--CEEEEEe
Confidence 667899998887775 57888988 49 9999984
No 252
>3sr3_A Microcin immunity protein MCCF; csgid, structural genomics, MCCF protein, center for structu genomics of infectious diseases, immune system; 1.50A {Bacillus anthracis} PDB: 3gjz_A 3t5m_A* 3u1b_A* 3tyx_A*
Probab=21.79 E-value=84 Score=29.01 Aligned_cols=75 Identities=9% Similarity=0.109 Sum_probs=55.1
Q ss_pred CCCHHHHHHHHHHHHhCCCcEEEEEeCCCCccccCCChhHHhhccCCCeEecCCCCHHhhhCccCcceEEecCCcchHHH
Q 044031 282 TFSAPQLKEIAIGLERSNQRFLWVVRNPSNAAEAELPEGFLERTKERGLVVKSWAPQSTILGHESVGGFVTHCGWSSVVE 361 (468)
Q Consensus 282 ~~~~~~~~~~~~al~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~pq~~il~~~~~~~~ithgG~~s~~e 361 (468)
..+.+....+.+++.+...+.||.+.++.. -..+.++++...+-.+|.. ||=+.-...+.-
T Consensus 62 g~d~~Ra~dL~~a~~Dp~i~aI~~~rGG~g-----------------~~rlL~~lD~~~i~~~PK~--~~GySDiTaL~~ 122 (336)
T 3sr3_A 62 GSIQERAKELNALIRNPNVSCIMSTIGGMN-----------------SNSLLPYIDYDAFQNNPKI--MIGYSDATALLL 122 (336)
T ss_dssp SCHHHHHHHHHHHHHCTTEEEEEESCCCSC-----------------GGGGGGGSCHHHHHHSCCE--EEECGGGHHHHH
T ss_pred CCHHHHHHHHHHHhhCCCCCEEEEcccccc-----------------HHHHhhhcChhHHhhCCeE--EEEechHHHHHH
Confidence 345566888999999999999998887611 1114466777776667777 888888888888
Q ss_pred HHH--hCCcEEecccc
Q 044031 362 AVT--YGVPMIAWPLY 375 (468)
Q Consensus 362 al~--~GvP~v~~P~~ 375 (468)
+++ .|+..+.=|..
T Consensus 123 al~~~~G~~t~hGp~~ 138 (336)
T 3sr3_A 123 GIYAKTGIPTFYGPAL 138 (336)
T ss_dssp HHHHHHCCCEEECCCH
T ss_pred HHHHhcCceEEECChh
Confidence 886 58888888863
No 253
>4egf_A L-xylulose reductase; structural genomics, ssgcid, seattle structural genomics CEN infectious disease, oxidoreductase; 2.30A {Mycobacterium smegmatis}
Probab=21.70 E-value=95 Score=27.20 Aligned_cols=33 Identities=9% Similarity=0.048 Sum_probs=26.2
Q ss_pred ceEEEecCCCccCHHHHHHHHHHHHhCCCCcEEEEEeC
Q 044031 3 KTIALYPGPAFHHMISMVELGKLILQHRSDVSITILVP 40 (468)
Q Consensus 3 ~~Iv~~~~~~~GHv~P~l~LA~~L~~~G~~h~Vt~~~~ 40 (468)
.++++++.++.| =..++|++|+++| ++|.++.-
T Consensus 20 ~k~vlVTGas~g---IG~aia~~l~~~G--~~V~~~~r 52 (266)
T 4egf_A 20 GKRALITGATKG---IGADIARAFAAAG--ARLVLSGR 52 (266)
T ss_dssp TCEEEETTTTSH---HHHHHHHHHHHTT--CEEEEEES
T ss_pred CCEEEEeCCCcH---HHHHHHHHHHHCC--CEEEEEeC
Confidence 468888877654 4678999999999 99988743
No 254
>3o1l_A Formyltetrahydrofolate deformylase; structural genomics, joint center for structural genomics, J protein structure initiative; HET: MSE; 2.20A {Pseudomonas syringae PV}
Probab=21.65 E-value=2.2e+02 Score=25.77 Aligned_cols=71 Identities=15% Similarity=0.165 Sum_probs=47.6
Q ss_pred HHHHHHHHHHhCCCcEEEEEeCCCCccccCCChhHHhhccCCCeEecCCCCHHhhhCccCcceEEecCCcchHHHHHHhC
Q 044031 287 QLKEIAIGLERSNQRFLWVVRNPSNAAEAELPEGFLERTKERGLVVKSWAPQSTILGHESVGGFVTHCGWSSVVEAVTYG 366 (468)
Q Consensus 287 ~~~~~~~al~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~pq~~il~~~~~~~~ithgG~~s~~eal~~G 366 (468)
.-.++++.|+..+..++...+.. ..+|+.|.+....+.+-+ |++. .=...|++.+..|+.+|
T Consensus 169 ~~~~~~~~l~~~~~DliVlagym-----~IL~~~~l~~~~~~~INi-----------HpSl--LP~frG~~p~~~Ai~~G 230 (302)
T 3o1l_A 169 AFAEVSRLVGHHQADVVVLARYM-----QILPPQLCREYAHQVINI-----------HHSF--LPSFVGAKPYHQASLRG 230 (302)
T ss_dssp HHHHHHHHHHHTTCSEEEESSCC-----SCCCTTHHHHTTTCEEEE-----------ESSC--TTSSCSSCHHHHHHHHT
T ss_pred HHHHHHHHHHHhCCCEEEHhHhh-----hhcCHHHHhhhhCCeEEe-----------Cccc--ccCCCCccHHHHHHHcC
Confidence 33457777888788888777764 456777665443222222 4443 44457999999999999
Q ss_pred CcEEecccc
Q 044031 367 VPMIAWPLY 375 (468)
Q Consensus 367 vP~v~~P~~ 375 (468)
+...++=.+
T Consensus 231 ~k~tG~TvH 239 (302)
T 3o1l_A 231 VKLIGATCH 239 (302)
T ss_dssp CSEEEEEEE
T ss_pred CCeEEEEEE
Confidence 999888763
No 255
>1zl0_A Hypothetical protein PA5198; structural genomics, PSI, PROT structure initiative, midwest center for structural genomic unknown function; HET: TLA PEG; 1.10A {Pseudomonas aeruginosa} SCOP: c.8.10.1 c.23.16.7 PDB: 1zrs_A 2aum_A 2aun_A
Probab=21.63 E-value=1.7e+02 Score=26.57 Aligned_cols=76 Identities=12% Similarity=0.168 Sum_probs=56.2
Q ss_pred cCCCHHHHHHHHHHHHhCCCcEEEEEeCCCCccccCCChhHHhhccCCCeEecCCCCHHhhhC-ccCcceEEecCCcchH
Q 044031 281 GTFSAPQLKEIAIGLERSNQRFLWVVRNPSNAAEAELPEGFLERTKERGLVVKSWAPQSTILG-HESVGGFVTHCGWSSV 359 (468)
Q Consensus 281 ~~~~~~~~~~~~~al~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~pq~~il~-~~~~~~~ithgG~~s~ 359 (468)
...+.+...++.+++.+..++.||.+.++.. -..+.++++...+-. +|.. ||=+.-...+
T Consensus 62 agtd~~Ra~dL~~a~~Dp~i~aI~~~rGGyg-----------------a~rlLp~LD~~~i~~a~PK~--~iGySDiTaL 122 (311)
T 1zl0_A 62 AGTVEQRLEDLHNAFDMPDITAVWCLRGGYG-----------------CGQLLPGLDWGRLQAASPRP--LIGFSDISVL 122 (311)
T ss_dssp SSCHHHHHHHHHHHHHSTTEEEEEESCCSSC-----------------GGGGTTTCCHHHHHHSCCCC--EEECGGGHHH
T ss_pred CCCHHHHHHHHHHHHhCCCCCEEEEccCCcC-----------------HHHHhhccchhhhhccCCCE--EEEEchhHHH
Confidence 3445677888999999999999999887611 011446777777665 7877 8888888888
Q ss_pred HHHHH-hCCcEEecccc
Q 044031 360 VEAVT-YGVPMIAWPLY 375 (468)
Q Consensus 360 ~eal~-~GvP~v~~P~~ 375 (468)
.-+++ .|++.+.=|..
T Consensus 123 ~~al~~~G~~t~hGp~~ 139 (311)
T 1zl0_A 123 LSAFHRHGLPAIHGPVA 139 (311)
T ss_dssp HHHHHHTTCCEEECCCG
T ss_pred HHHHHHcCCcEEECHhh
Confidence 88886 48888887754
No 256
>3tzq_B Short-chain type dehydrogenase/reductase; ssgcid, structural genomics, seattle structural genomics CEN infectious disease, oxidoreductase; 2.50A {Mycobacterium marinum} SCOP: c.2.1.0
Probab=21.53 E-value=1.2e+02 Score=26.58 Aligned_cols=33 Identities=9% Similarity=0.141 Sum_probs=26.3
Q ss_pred ceEEEecCCCccCHHHHHHHHHHHHhCCCCcEEEEEeC
Q 044031 3 KTIALYPGPAFHHMISMVELGKLILQHRSDVSITILVP 40 (468)
Q Consensus 3 ~~Iv~~~~~~~GHv~P~l~LA~~L~~~G~~h~Vt~~~~ 40 (468)
.++++++.++.| =..++|++|+++| ++|.++.-
T Consensus 11 ~k~vlVTGas~g---IG~aia~~l~~~G--~~V~~~~r 43 (271)
T 3tzq_B 11 NKVAIITGACGG---IGLETSRVLARAG--ARVVLADL 43 (271)
T ss_dssp TCEEEEETTTSH---HHHHHHHHHHHTT--CEEEEEEC
T ss_pred CCEEEEECCCcH---HHHHHHHHHHHCC--CEEEEEcC
Confidence 468888877654 3678999999999 99988854
No 257
>1p9o_A Phosphopantothenoylcysteine synthetase; ligase; 2.30A {Homo sapiens} SCOP: c.72.3.1
Probab=21.52 E-value=63 Score=29.53 Aligned_cols=23 Identities=9% Similarity=0.020 Sum_probs=19.5
Q ss_pred HHHHHHHHHHhCCCCcEEEEEeCCC
Q 044031 18 SMVELGKLILQHRSDVSITILVPSM 42 (468)
Q Consensus 18 P~l~LA~~L~~~G~~h~Vt~~~~~~ 42 (468)
-..++|+.+.++| ++|||++...
T Consensus 67 mG~aiAe~~~~~G--a~V~lv~g~~ 89 (313)
T 1p9o_A 67 RGATSAEAFLAAG--YGVLFLYRAR 89 (313)
T ss_dssp HHHHHHHHHHHTT--CEEEEEEETT
T ss_pred HHHHHHHHHHHCC--CEEEEEecCC
Confidence 4668899999999 9999997643
No 258
>4h15_A Short chain alcohol dehydrogenase-related dehydro; structural genomics, PSI-biology, nysgrc; HET: MSE; 1.45A {Sinorhizobium meliloti} PDB: 4h16_A*
Probab=21.51 E-value=98 Score=27.27 Aligned_cols=33 Identities=12% Similarity=-0.022 Sum_probs=27.7
Q ss_pred ceEEEecCCCccCHHHHHHHHHHHHhCCCCcEEEEEeC
Q 044031 3 KTIALYPGPAFHHMISMVELGKLILQHRSDVSITILVP 40 (468)
Q Consensus 3 ~~Iv~~~~~~~GHv~P~l~LA~~L~~~G~~h~Vt~~~~ 40 (468)
.++++++.++.| =..++|++|+++| ++|.+..-
T Consensus 11 GK~alVTGas~G---IG~aia~~la~~G--a~V~~~~r 43 (261)
T 4h15_A 11 GKRALITAGTKG---AGAATVSLFLELG--AQVLTTAR 43 (261)
T ss_dssp TCEEEESCCSSH---HHHHHHHHHHHTT--CEEEEEES
T ss_pred CCEEEEeccCcH---HHHHHHHHHHHcC--CEEEEEEC
Confidence 379999988876 3688999999999 99988743
No 259
>3gvc_A Oxidoreductase, probable short-chain type dehydrogenase/reductase; ssgcid, decode, niaid, UWPPG, SBRI, structural genomics; 2.45A {Mycobacterium tuberculosis}
Probab=21.44 E-value=1.1e+02 Score=27.13 Aligned_cols=32 Identities=6% Similarity=0.081 Sum_probs=25.2
Q ss_pred ceEEEecCCCccCHHHHHHHHHHHHhCCCCcEEEEEe
Q 044031 3 KTIALYPGPAFHHMISMVELGKLILQHRSDVSITILV 39 (468)
Q Consensus 3 ~~Iv~~~~~~~GHv~P~l~LA~~L~~~G~~h~Vt~~~ 39 (468)
.++++++.++.| =..++|++|+++| ++|.++.
T Consensus 29 gk~vlVTGas~g---IG~aia~~la~~G--~~V~~~~ 60 (277)
T 3gvc_A 29 GKVAIVTGAGAG---IGLAVARRLADEG--CHVLCAD 60 (277)
T ss_dssp TCEEEETTTTST---HHHHHHHHHHHTT--CEEEEEE
T ss_pred CCEEEEECCCcH---HHHHHHHHHHHCC--CEEEEEe
Confidence 468888866654 3568999999999 9998874
No 260
>1wrd_A TOM1, target of MYB protein 1; three-helix bundle, ubiquitin-binding protein, protein trans signaling protein complex; 1.75A {Homo sapiens} SCOP: a.7.8.1
Probab=21.41 E-value=1.6e+02 Score=21.79 Aligned_cols=30 Identities=17% Similarity=0.145 Sum_probs=21.8
Q ss_pred ccHHHHHHHHHHHhcCchhHHHHHHHHHHHHHHHHh
Q 044031 411 VSAERVEERVRELMMGSEGKALRERSLEMRMMAATA 446 (468)
Q Consensus 411 ~~~~~l~~av~~~l~~~~~~~~~~~a~~l~~~~~~a 446 (468)
++++++.+...++= .++.+++-|.+++...
T Consensus 3 ~~~eq~~k~~~el~------~v~~n~~lL~EML~~~ 32 (103)
T 1wrd_A 3 LGSEQIGKLRSELE------MVSGNVRVMSEMLTEL 32 (103)
T ss_dssp SSSTTHHHHHHHHH------HHHHHHHHHHHHHHHS
T ss_pred CCHHHHHHHHHHHH------HHHHHHHHHHHHHHhc
Confidence 67777777766652 6888888888887764
No 261
>3e03_A Short chain dehydrogenase; structural genomics, PSI-2, protein structure initiative, NEW YORK structural genomix research consortium; 1.69A {Xanthomonas campestris PV}
Probab=21.32 E-value=1.2e+02 Score=26.71 Aligned_cols=35 Identities=9% Similarity=0.057 Sum_probs=27.5
Q ss_pred cceEEEecCCCccCHHHHHHHHHHHHhCCCCcEEEEEeCC
Q 044031 2 KKTIALYPGPAFHHMISMVELGKLILQHRSDVSITILVPS 41 (468)
Q Consensus 2 ~~~Iv~~~~~~~GHv~P~l~LA~~L~~~G~~h~Vt~~~~~ 41 (468)
+.++++++.++.| =..++|++|+++| ++|.++.-.
T Consensus 5 ~~k~~lVTGas~G---IG~aia~~la~~G--~~V~~~~r~ 39 (274)
T 3e03_A 5 SGKTLFITGASRG---IGLAIALRAARDG--ANVAIAAKS 39 (274)
T ss_dssp TTCEEEEETTTSH---HHHHHHHHHHHTT--CEEEEEESC
T ss_pred CCcEEEEECCCCh---HHHHHHHHHHHCC--CEEEEEecc
Confidence 4578888877654 4578999999999 999888544
No 262
>3pgx_A Carveol dehydrogenase; structural genomics, seattle structural genomics center for infectious disease, ssgcid; HET: NAD; 1.85A {Mycobacterium avium} SCOP: c.2.1.0
Probab=21.22 E-value=96 Score=27.39 Aligned_cols=33 Identities=12% Similarity=-0.029 Sum_probs=26.4
Q ss_pred ceEEEecCCCccCHHHHHHHHHHHHhCCCCcEEEEEeC
Q 044031 3 KTIALYPGPAFHHMISMVELGKLILQHRSDVSITILVP 40 (468)
Q Consensus 3 ~~Iv~~~~~~~GHv~P~l~LA~~L~~~G~~h~Vt~~~~ 40 (468)
.++++++.++.| =..++|++|+++| ++|.++.-
T Consensus 15 gk~~lVTGas~g---IG~a~a~~la~~G--~~V~~~~r 47 (280)
T 3pgx_A 15 GRVAFITGAARG---QGRSHAVRLAAEG--ADIIACDI 47 (280)
T ss_dssp TCEEEEESTTSH---HHHHHHHHHHHTT--CEEEEEEC
T ss_pred CCEEEEECCCcH---HHHHHHHHHHHCC--CEEEEEec
Confidence 478888877654 3678999999999 99988743
No 263
>3o26_A Salutaridine reductase; short chain dehydrogenase/reductases, oxidoreductase; HET: NDP; 1.91A {Papaver somniferum} SCOP: c.2.1.0
Probab=21.19 E-value=94 Score=27.67 Aligned_cols=33 Identities=12% Similarity=0.122 Sum_probs=26.3
Q ss_pred ceEEEecCCCccCHHHHHHHHHHHHhCCCCcEEEEEeC
Q 044031 3 KTIALYPGPAFHHMISMVELGKLILQHRSDVSITILVP 40 (468)
Q Consensus 3 ~~Iv~~~~~~~GHv~P~l~LA~~L~~~G~~h~Vt~~~~ 40 (468)
.++++++.++.| =..++|++|+++| ++|.++.-
T Consensus 12 ~k~vlITGas~G---IG~~~a~~L~~~G--~~V~~~~r 44 (311)
T 3o26_A 12 RRCAVVTGGNKG---IGFEICKQLSSNG--IMVVLTCR 44 (311)
T ss_dssp CCEEEESSCSSH---HHHHHHHHHHHTT--CEEEEEES
T ss_pred CcEEEEecCCch---HHHHHHHHHHHCC--CEEEEEeC
Confidence 468888877654 4678999999999 99988843
No 264
>1eiw_A Hypothetical protein MTH538; CHEY-like fold, flavodoxin-like fold, (A/B)5 doubly wound fold, parallel beta sheet; NMR {Methanothermobacterthermautotrophicus} SCOP: c.23.3.1
Probab=21.08 E-value=1.5e+02 Score=22.32 Aligned_cols=65 Identities=12% Similarity=0.098 Sum_probs=44.0
Q ss_pred hCccCcceEEecCCcch---------HHHHHHhCCcEEecccccchhhHHHHHHhhcceeeeeccCCcccccCCCCcccc
Q 044031 342 LGHESVGGFVTHCGWSS---------VVEAVTYGVPMIAWPLYAEQFLNSVALVQEMKVAMPMFLNGEEETIGNGEGVVS 412 (468)
Q Consensus 342 l~~~~~~~~ithgG~~s---------~~eal~~GvP~v~~P~~~DQ~~na~~~~~~~g~g~~~~~~~~~~~~~~~~~~~~ 412 (468)
+..+++ +|--+|..| +..|...|+|+|++=.++.+.. -..+. ..|..+-. .+
T Consensus 36 I~~~~~--vIvL~G~~t~~s~wv~~EI~~A~~~gkpIigV~~~g~~~~-P~~l~---~~a~~iV~-------------Wn 96 (111)
T 1eiw_A 36 PEDADA--VIVLAGLWGTRRDEILGAVDLARKSSKPIITVRPYGLENV-PPELE---AVSSEVVG-------------WN 96 (111)
T ss_dssp SSSCSE--EEEEGGGTTTSHHHHHHHHHHHTTTTCCEEEECCSSSSCC-CTTHH---HHCSEEEC-------------SC
T ss_pred cccCCE--EEEEeCCCcCCChHHHHHHHHHHHcCCCEEEEEcCCCCcC-CHHHH---hhCceecc-------------CC
Confidence 444565 888889887 6778899999999877665411 11132 22333331 78
Q ss_pred HHHHHHHHHHHhc
Q 044031 413 AERVEERVRELMM 425 (468)
Q Consensus 413 ~~~l~~av~~~l~ 425 (468)
.+.|.++|+..++
T Consensus 97 ~~~I~~aI~~~~~ 109 (111)
T 1eiw_A 97 PHCIRDALEDALD 109 (111)
T ss_dssp HHHHHHHHHHHHC
T ss_pred HHHHHHHHHhccC
Confidence 8999999998764
No 265
>1hxh_A 3BETA/17BETA-hydroxysteroid dehydrogenase; alpha-beta, rossmann fold, short-chain dehydrogenase, oxidoreductase; 1.22A {Comamonas testosteroni} SCOP: c.2.1.2
Probab=21.07 E-value=1e+02 Score=26.75 Aligned_cols=34 Identities=24% Similarity=0.263 Sum_probs=25.7
Q ss_pred CcceEEEecCCCccCHHHHHHHHHHHHhCCCCcEEEEEe
Q 044031 1 MKKTIALYPGPAFHHMISMVELGKLILQHRSDVSITILV 39 (468)
Q Consensus 1 m~~~Iv~~~~~~~GHv~P~l~LA~~L~~~G~~h~Vt~~~ 39 (468)
|+.++++++.++.| =..++|++|+++| ++|+++.
T Consensus 4 l~~k~vlVTGas~g---iG~~ia~~l~~~G--~~V~~~~ 37 (253)
T 1hxh_A 4 LQGKVALVTGGASG---VGLEVVKLLLGEG--AKVAFSD 37 (253)
T ss_dssp TTTCEEEETTTTSH---HHHHHHHHHHHTT--CEEEEEC
T ss_pred CCCCEEEEeCCCcH---HHHHHHHHHHHCC--CEEEEEe
Confidence 44467788865543 4678999999999 9998873
No 266
>1vl8_A Gluconate 5-dehydrogenase; TM0441, structural genomics, JCSG structure initiative, PSI, joint center for structural GENO oxidoreductase; HET: NAP; 2.07A {Thermotoga maritima} SCOP: c.2.1.2
Probab=20.96 E-value=1.1e+02 Score=26.94 Aligned_cols=34 Identities=12% Similarity=0.123 Sum_probs=25.8
Q ss_pred cceEEEecCCCccCHHHHHHHHHHHHhCCCCcEEEEEeC
Q 044031 2 KKTIALYPGPAFHHMISMVELGKLILQHRSDVSITILVP 40 (468)
Q Consensus 2 ~~~Iv~~~~~~~GHv~P~l~LA~~L~~~G~~h~Vt~~~~ 40 (468)
+.++++++.++.| =..++|++|+++| ++|+++.-
T Consensus 20 ~~k~~lVTGas~g---IG~~ia~~l~~~G--~~V~~~~r 53 (267)
T 1vl8_A 20 RGRVALVTGGSRG---LGFGIAQGLAEAG--CSVVVASR 53 (267)
T ss_dssp TTCEEEEETTTSH---HHHHHHHHHHHTT--CEEEEEES
T ss_pred CCCEEEEECCCCH---HHHHHHHHHHHCC--CEEEEEeC
Confidence 3467888865543 3678999999999 99988743
No 267
>3kcq_A Phosphoribosylglycinamide formyltransferase; structural genomics, niaid, seattle structural center for infectious disease, ssgcid; 2.20A {Anaplasma phagocytophilum} SCOP: c.65.1.0
Probab=20.92 E-value=1.9e+02 Score=24.68 Aligned_cols=69 Identities=19% Similarity=0.255 Sum_probs=46.4
Q ss_pred HHHHHHHHhCCCcEEEEEeCCCCccccCCChhHHhhccCCCeEecCCCCHHhhhCccCcceEEecCCcchHHHHHHhCCc
Q 044031 289 KEIAIGLERSNQRFLWVVRNPSNAAEAELPEGFLERTKERGLVVKSWAPQSTILGHESVGGFVTHCGWSSVVEAVTYGVP 368 (468)
Q Consensus 289 ~~~~~al~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~pq~~il~~~~~~~~ithgG~~s~~eal~~GvP 368 (468)
.++.+.|+..+..++.+.+.. ..+|+.+.+......+-+ |++. .=...|+..+..|+.+|+.
T Consensus 72 ~~~~~~L~~~~~Dlivlagy~-----~IL~~~~l~~~~~~~iNi-----------HpSL--LP~yrG~~pi~~Ai~~G~~ 133 (215)
T 3kcq_A 72 EHISTVLREHDVDLVCLAGFM-----SILPEKFVTDWHHKIINI-----------HPSL--LPSFKGLNAQEQAYKAGVK 133 (215)
T ss_dssp HHHHHHHHHTTCSEEEESSCC-----SCCCHHHHHHTTTSEEEE-----------ESSC--TTTTCSSCHHHHHHHHTCS
T ss_pred HHHHHHHHHhCCCEEEEeCCc-----eEeCHHHHhhccCCeEEE-----------Cccc--ccCCCCccHHHHHHHcCCC
Confidence 456777777788888877764 457777665433222222 4444 4445689999999999999
Q ss_pred EEecccc
Q 044031 369 MIAWPLY 375 (468)
Q Consensus 369 ~v~~P~~ 375 (468)
..++=.+
T Consensus 134 ~tGvTvh 140 (215)
T 3kcq_A 134 IAGCTLH 140 (215)
T ss_dssp EEEEEEE
T ss_pred eEEEEEE
Confidence 8877753
No 268
>2nwq_A Probable short-chain dehydrogenase; oxidoreductase; 2.30A {Pseudomonas aeruginosa}
Probab=20.92 E-value=88 Score=27.61 Aligned_cols=33 Identities=9% Similarity=0.051 Sum_probs=25.1
Q ss_pred CcceEEEecCCCccCHHHHHHHHHHHHhCCCCcEEEEEe
Q 044031 1 MKKTIALYPGPAFHHMISMVELGKLILQHRSDVSITILV 39 (468)
Q Consensus 1 m~~~Iv~~~~~~~GHv~P~l~LA~~L~~~G~~h~Vt~~~ 39 (468)
|+ ++++++.++.| + ..++|++|+++| ++|+++.
T Consensus 20 ~~-k~vlVTGas~g-I--G~aia~~La~~G--~~V~~~~ 52 (272)
T 2nwq_A 20 MS-STLFITGATSG-F--GEACARRFAEAG--WSLVLTG 52 (272)
T ss_dssp -C-CEEEESSTTTS-S--HHHHHHHHHHTT--CEEEEEE
T ss_pred cC-cEEEEeCCCCH-H--HHHHHHHHHHCC--CEEEEEE
Confidence 44 57788866654 2 578999999999 9998874
No 269
>3q2i_A Dehydrogenase; rossmann fold, UDP-sugar binding, NAD binding oxidoreductase; HET: NAD HP7; 1.50A {Chromobacterium violaceum} PDB: 3q2k_A*
Probab=20.89 E-value=4.6e+02 Score=23.81 Aligned_cols=108 Identities=17% Similarity=0.177 Sum_probs=57.7
Q ss_pred eEEeccCCCcCCCHHHHHHHHHHHHhC--CCcEEEEEeCCCCccccCCChhHHhhccCCCeEecCCCCHHhhhCccCcce
Q 044031 272 VVFLCFGSRGTFSAPQLKEIAIGLERS--NQRFLWVVRNPSNAAEAELPEGFLERTKERGLVVKSWAPQSTILGHESVGG 349 (468)
Q Consensus 272 ~v~vs~GS~~~~~~~~~~~~~~al~~~--~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~pq~~il~~~~~~~ 349 (468)
+.+|+.|.++ ...+.++... +..++.++... .+ -.+.+.++. ++ ..+-...++|..+++++
T Consensus 16 vgiiG~G~~g-------~~~~~~l~~~~~~~~lvav~d~~----~~-~~~~~~~~~---~~--~~~~~~~~ll~~~~~D~ 78 (354)
T 3q2i_A 16 FALVGCGRIA-------NNHFGALEKHADRAELIDVCDID----PA-ALKAAVERT---GA--RGHASLTDMLAQTDADI 78 (354)
T ss_dssp EEEECCSTTH-------HHHHHHHHHTTTTEEEEEEECSS----HH-HHHHHHHHH---CC--EEESCHHHHHHHCCCSE
T ss_pred EEEEcCcHHH-------HHHHHHHHhCCCCeEEEEEEcCC----HH-HHHHHHHHc---CC--ceeCCHHHHhcCCCCCE
Confidence 8899999886 3455666655 56666555432 00 001122221 22 23456777887666555
Q ss_pred EEecCCcc----hHHHHHHhCCcEEe-ccccc--chhhHHHHHHhhcceeeeec
Q 044031 350 FVTHCGWS----SVVEAVTYGVPMIA-WPLYA--EQFLNSVALVQEMKVAMPMF 396 (468)
Q Consensus 350 ~ithgG~~----s~~eal~~GvP~v~-~P~~~--DQ~~na~~~~~~~g~g~~~~ 396 (468)
++--.-.. -+.+++.+|+++++ -|+.. ++-.-...++++.|+-+.+.
T Consensus 79 V~i~tp~~~h~~~~~~al~~gk~v~~EKP~a~~~~~~~~l~~~a~~~g~~~~v~ 132 (354)
T 3q2i_A 79 VILTTPSGLHPTQSIECSEAGFHVMTEKPMATRWEDGLEMVKAADKAKKHLFVV 132 (354)
T ss_dssp EEECSCGGGHHHHHHHHHHTTCEEEECSSSCSSHHHHHHHHHHHHHHTCCEEEC
T ss_pred EEECCCcHHHHHHHHHHHHCCCCEEEeCCCcCCHHHHHHHHHHHHHhCCeEEEE
Confidence 55433222 46678999999887 47643 33333233333335555443
No 270
>3tl4_X Glutaminyl-tRNA synthetase; glutamine, appended domain, hinge, tRNA LIG amidotransferase, ligase; 2.30A {Saccharomyces cerevisiae}
Probab=20.78 E-value=87 Score=26.13 Aligned_cols=52 Identities=10% Similarity=0.092 Sum_probs=32.9
Q ss_pred ccHHHHHHHHHHHhcCch----hHHHHHHHHHHHHHHHH----hhcCCCCCChHHHHHHHHHH
Q 044031 411 VSAERVEERVRELMMGSE----GKALRERSLEMRMMAAT----AWNNNDGGSSFTAFSNLFDL 465 (468)
Q Consensus 411 ~~~~~l~~av~~~l~~~~----~~~~~~~a~~l~~~~~~----a~~~~~~g~~~~~~~~~~~~ 465 (468)
+|+|+|.++|.++++..+ .+.|+ +.-.+-..+|+ -|+ ++-.-...+++-+-+
T Consensus 117 VT~EqI~~~V~~~i~~~k~~i~~~RY~-~~g~ll~~vr~~p~LkWA--d~~~vK~~vD~~~l~ 176 (187)
T 3tl4_X 117 ITEDQVRNYVMQYIQENKERILTERYK-LVPGIFADVKNLKELKWA--DPRSFKPIIDQEVLK 176 (187)
T ss_dssp CCHHHHHHHHHHHHHHTHHHHHHHGGG-GHHHHHHHHHTCGGGTTS--CTTSHHHHHHHHHHH
T ss_pred eCHHHHHHHHHHHHHHhHHHHHHhccc-cHHHHHHHHhcccCCCCC--CHHHHHHHHHHHHHH
Confidence 588899999999996322 23455 66666555554 355 566666666655443
No 271
>3rwb_A TPLDH, pyridoxal 4-dehydrogenase; short chain dehydrogenase/reductase, 4-pyridoxola NAD+, oxidoreductase; HET: NAD 4PL; 1.70A {Mesorhizobium loti} PDB: 3ndr_A* 3nug_A*
Probab=20.72 E-value=1e+02 Score=26.63 Aligned_cols=32 Identities=13% Similarity=0.089 Sum_probs=25.7
Q ss_pred cceEEEecCCCccCHHHHHHHHHHHHhCCCCcEEEEE
Q 044031 2 KKTIALYPGPAFHHMISMVELGKLILQHRSDVSITIL 38 (468)
Q Consensus 2 ~~~Iv~~~~~~~GHv~P~l~LA~~L~~~G~~h~Vt~~ 38 (468)
+.++++++.++.| =..++|++|+++| ++|.++
T Consensus 5 ~gk~vlVTGas~g---IG~a~a~~l~~~G--~~V~~~ 36 (247)
T 3rwb_A 5 AGKTALVTGAAQG---IGKAIAARLAADG--ATVIVS 36 (247)
T ss_dssp TTCEEEEETTTSH---HHHHHHHHHHHTT--CEEEEE
T ss_pred CCCEEEEECCCCH---HHHHHHHHHHHCC--CEEEEE
Confidence 4578888876654 3578999999999 999887
No 272
>4fn4_A Short chain dehydrogenase; NADH-binding, rossmann fold, oxidoreductase; HET: NAD; 1.75A {Sulfolobus acidocaldarius}
Probab=20.69 E-value=93 Score=27.35 Aligned_cols=33 Identities=9% Similarity=0.082 Sum_probs=28.0
Q ss_pred cceEEEecCCCccCHHHHHHHHHHHHhCCCCcEEEEEe
Q 044031 2 KKTIALYPGPAFHHMISMVELGKLILQHRSDVSITILV 39 (468)
Q Consensus 2 ~~~Iv~~~~~~~GHv~P~l~LA~~L~~~G~~h~Vt~~~ 39 (468)
+-++++++.++.| =..++|++|+++| .+|.++.
T Consensus 6 ~gKvalVTGas~G---IG~aiA~~la~~G--a~Vv~~~ 38 (254)
T 4fn4_A 6 KNKVVIVTGAGSG---IGRAIAKKFALND--SIVVAVE 38 (254)
T ss_dssp TTCEEEEETTTSH---HHHHHHHHHHHTT--CEEEEEE
T ss_pred CCCEEEEeCCCCH---HHHHHHHHHHHcC--CEEEEEE
Confidence 4579999988887 3789999999999 9998874
No 273
>3op4_A 3-oxoacyl-[acyl-carrier protein] reductase; 3-ketoacyl-(acyl-carrier-protein) reductase; HET: MSE NAP; 1.60A {Vibrio cholerae o1 biovar el tor} SCOP: c.2.1.2 PDB: 3rsh_A* 3rro_A* 4i08_A* 3tzk_A 3tzc_A* 3u09_A 3tzh_A 1q7b_A* 1i01_A* 1q7c_A* 2cf2_E
Probab=20.67 E-value=1.1e+02 Score=26.55 Aligned_cols=32 Identities=13% Similarity=0.130 Sum_probs=25.7
Q ss_pred ceEEEecCCCccCHHHHHHHHHHHHhCCCCcEEEEEe
Q 044031 3 KTIALYPGPAFHHMISMVELGKLILQHRSDVSITILV 39 (468)
Q Consensus 3 ~~Iv~~~~~~~GHv~P~l~LA~~L~~~G~~h~Vt~~~ 39 (468)
.++++++.++.| =..++|++|+++| ++|.++.
T Consensus 9 gk~~lVTGas~g---IG~a~a~~l~~~G--~~V~~~~ 40 (248)
T 3op4_A 9 GKVALVTGASRG---IGKAIAELLAERG--AKVIGTA 40 (248)
T ss_dssp TCEEEESSCSSH---HHHHHHHHHHHTT--CEEEEEE
T ss_pred CCEEEEeCCCCH---HHHHHHHHHHHCC--CEEEEEe
Confidence 468888876654 3678999999999 9998874
No 274
>4dmm_A 3-oxoacyl-[acyl-carrier-protein] reductase; rossmann fold, oxoacyl-ACP reductase, NADP binding, fatty AC biosynthsis, oxidoreductase; HET: NAP; 2.38A {Synechococcus elongatus} PDB: 4dml_A*
Probab=20.65 E-value=1e+02 Score=27.10 Aligned_cols=33 Identities=12% Similarity=0.073 Sum_probs=26.1
Q ss_pred ceEEEecCCCccCHHHHHHHHHHHHhCCCCcEEEEEeC
Q 044031 3 KTIALYPGPAFHHMISMVELGKLILQHRSDVSITILVP 40 (468)
Q Consensus 3 ~~Iv~~~~~~~GHv~P~l~LA~~L~~~G~~h~Vt~~~~ 40 (468)
.++++++.++.| =..++|++|+++| ++|.+...
T Consensus 28 ~k~vlVTGas~g---IG~aia~~la~~G--~~V~~~~~ 60 (269)
T 4dmm_A 28 DRIALVTGASRG---IGRAIALELAAAG--AKVAVNYA 60 (269)
T ss_dssp TCEEEETTCSSH---HHHHHHHHHHHTT--CEEEEEES
T ss_pred CCEEEEECCCCH---HHHHHHHHHHHCC--CEEEEEeC
Confidence 468888876654 3678999999999 99988743
No 275
>3un1_A Probable oxidoreductase; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; 2.45A {Sinorhizobium meliloti}
Probab=20.64 E-value=2.5e+02 Score=24.25 Aligned_cols=33 Identities=6% Similarity=0.032 Sum_probs=25.4
Q ss_pred ceEEEecCCCccCHHHHHHHHHHHHhCCCCcEEEEEeC
Q 044031 3 KTIALYPGPAFHHMISMVELGKLILQHRSDVSITILVP 40 (468)
Q Consensus 3 ~~Iv~~~~~~~GHv~P~l~LA~~L~~~G~~h~Vt~~~~ 40 (468)
.++++++.++.| =..++|++|+++| ++|.++.-
T Consensus 28 ~k~vlVTGas~g---IG~aia~~l~~~G--~~V~~~~r 60 (260)
T 3un1_A 28 QKVVVITGASQG---IGAGLVRAYRDRN--YRVVATSR 60 (260)
T ss_dssp CCEEEESSCSSH---HHHHHHHHHHHTT--CEEEEEES
T ss_pred CCEEEEeCCCCH---HHHHHHHHHHHCC--CEEEEEeC
Confidence 467888866543 3568999999999 99998853
No 276
>1qfj_A Protein (flavin reductase); riboflavin, ferredoxin reductase superfami oxidoreductase; 2.20A {Escherichia coli} SCOP: b.43.4.2 c.25.1.1
Probab=20.59 E-value=88 Score=26.64 Aligned_cols=63 Identities=13% Similarity=0.062 Sum_probs=36.8
Q ss_pred eEEEecCCCccCHHHHHHHHHHHHhCCCCcEEEEEeCCCCCCchhhhhhhhccccCCCCCeeEEEc
Q 044031 4 TIALYPGPAFHHMISMVELGKLILQHRSDVSITILVPSMPLEESKTCSYINSISHRLNPIISFYYL 69 (468)
Q Consensus 4 ~Iv~~~~~~~GHv~P~l~LA~~L~~~G~~h~Vt~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~i 69 (468)
+++++..++ | +.|++.+++.|.++++..+|+++......+...+.+....+.. ..+++++..+
T Consensus 104 ~~vliagG~-G-itP~~~~l~~l~~~~~~~~v~l~~~~r~~~~~~~~~el~~l~~-~~~~~~~~~~ 166 (232)
T 1qfj_A 104 PMILIAGGT-G-FSYARSILLTALARNPNRDITIYWGGREEQHLYDLCELEALSL-KHPGLQVVPV 166 (232)
T ss_dssp CEEEEEETT-C-HHHHHHHHHHHHHHCTTCCEEEEEEESSGGGCTTHHHHHHHHH-HCTTEEEEEE
T ss_pred cEEEEEecc-c-HhHHHHHHHHHHhcCCCCcEEEEEeeCCHHHhhhHHHHHHHHH-HCCCeEEEEE
Confidence 577777554 3 9999999999998764456777644333332223333333321 2346776544
No 277
>3rd5_A Mypaa.01249.C; ssgcid, structural genomics, seattle structural genomics CEN infectious disease, oxidoreductase; HET: EPE; 1.50A {Mycobacterium paratuberculosis}
Probab=20.58 E-value=1.1e+02 Score=27.27 Aligned_cols=33 Identities=6% Similarity=0.075 Sum_probs=25.8
Q ss_pred cceEEEecCCCccCHHHHHHHHHHHHhCCCCcEEEEEe
Q 044031 2 KKTIALYPGPAFHHMISMVELGKLILQHRSDVSITILV 39 (468)
Q Consensus 2 ~~~Iv~~~~~~~GHv~P~l~LA~~L~~~G~~h~Vt~~~ 39 (468)
+.++++++.++.| =..++|++|+++| ++|.++.
T Consensus 15 ~gk~vlVTGas~g---IG~~~a~~L~~~G--~~V~~~~ 47 (291)
T 3rd5_A 15 AQRTVVITGANSG---LGAVTARELARRG--ATVIMAV 47 (291)
T ss_dssp TTCEEEEECCSSH---HHHHHHHHHHHTT--CEEEEEE
T ss_pred CCCEEEEeCCCCh---HHHHHHHHHHHCC--CEEEEEE
Confidence 3468888866643 3578999999999 9998884
No 278
>2wsb_A Galactitol dehydrogenase; oxidoreductase, SDR, rossmann fold, tagatose; HET: NAD; 1.25A {Rhodobacter sphaeroides} PDB: 2wdz_A* 3lqf_A*
Probab=20.52 E-value=1.1e+02 Score=26.29 Aligned_cols=33 Identities=9% Similarity=0.094 Sum_probs=24.7
Q ss_pred ceEEEecCCCccCHHHHHHHHHHHHhCCCCcEEEEEeC
Q 044031 3 KTIALYPGPAFHHMISMVELGKLILQHRSDVSITILVP 40 (468)
Q Consensus 3 ~~Iv~~~~~~~GHv~P~l~LA~~L~~~G~~h~Vt~~~~ 40 (468)
.+.++++.++ |- =..++|++|+++| ++|+++.-
T Consensus 11 ~k~vlITGas-gg--iG~~la~~l~~~G--~~V~~~~r 43 (254)
T 2wsb_A 11 GACAAVTGAG-SG--IGLEICRAFAASG--ARLILIDR 43 (254)
T ss_dssp TCEEEEETTT-SH--HHHHHHHHHHHTT--CEEEEEES
T ss_pred CCEEEEECCC-cH--HHHHHHHHHHHCC--CEEEEEeC
Confidence 3577777554 43 3678999999999 99988843
No 279
>1zk4_A R-specific alcohol dehydrogenase; short chain reductases/dehydrogenases, magnesium dependence, oxidoreductase; HET: NAP; 1.00A {Lactobacillus brevis} SCOP: c.2.1.2 PDB: 1nxq_A* 1zjy_A* 1zjz_A* 1zk0_A* 1zk1_A* 1zk2_A 1zk3_A
Probab=20.49 E-value=1.1e+02 Score=26.19 Aligned_cols=35 Identities=9% Similarity=0.184 Sum_probs=25.8
Q ss_pred CcceEEEecCCCccCHHHHHHHHHHHHhCCCCcEEEEEeC
Q 044031 1 MKKTIALYPGPAFHHMISMVELGKLILQHRSDVSITILVP 40 (468)
Q Consensus 1 m~~~Iv~~~~~~~GHv~P~l~LA~~L~~~G~~h~Vt~~~~ 40 (468)
|+.+.++++.++.| =..++|++|+++| ++|+++.-
T Consensus 4 ~~~k~vlVtGasgg---iG~~~a~~l~~~G--~~V~~~~r 38 (251)
T 1zk4_A 4 LDGKVAIITGGTLG---IGLAIATKFVEEG--AKVMITGR 38 (251)
T ss_dssp TTTCEEEETTTTSH---HHHHHHHHHHHTT--CEEEEEES
T ss_pred CCCcEEEEeCCCCh---HHHHHHHHHHHCC--CEEEEEeC
Confidence 34467777755443 4678999999999 99988743
No 280
>1qzu_A Hypothetical protein MDS018; alpha-beta sandwich, lyase; HET: FMN; 2.91A {Homo sapiens} SCOP: c.34.1.1
Probab=20.48 E-value=86 Score=26.62 Aligned_cols=37 Identities=5% Similarity=0.055 Sum_probs=28.4
Q ss_pred ceEEEecCCCccCHHHHHHHHHHHHh-CCCCcEEEEEeCCC
Q 044031 3 KTIALYPGPAFHHMISMVELGKLILQ-HRSDVSITILVPSM 42 (468)
Q Consensus 3 ~~Iv~~~~~~~GHv~P~l~LA~~L~~-~G~~h~Vt~~~~~~ 42 (468)
+||++...|+.+=+ -...|.++|.+ +| ++|.++.+..
T Consensus 20 k~IllgvTGsiaa~-k~~~lv~~L~~~~g--~~V~vv~T~~ 57 (206)
T 1qzu_A 20 FHVLVGVTGSVAAL-KLPLLVSKLLDIPG--LEVAVVTTER 57 (206)
T ss_dssp EEEEEEECSSGGGG-THHHHHHHHC---C--EEEEEEECTG
T ss_pred CEEEEEEeChHHHH-HHHHHHHHHhcccC--CEEEEEECHh
Confidence 57888888887754 46999999999 89 9999997654
No 281
>3db2_A Putative NADPH-dependent oxidoreductase; two domain protein, rossman fold, putative dehydrogenase, ST genomics; 1.70A {Desulfitobacterium hafniense dcb-2}
Probab=20.46 E-value=4.1e+02 Score=24.17 Aligned_cols=108 Identities=15% Similarity=0.124 Sum_probs=57.1
Q ss_pred eEEeccCCCcCCCHHHHHHHHHHHHhC-CCcEEEEEeCCCCccccCCChhHHhhccCCCeEecCCCCHHhhhCccCcceE
Q 044031 272 VVFLCFGSRGTFSAPQLKEIAIGLERS-NQRFLWVVRNPSNAAEAELPEGFLERTKERGLVVKSWAPQSTILGHESVGGF 350 (468)
Q Consensus 272 ~v~vs~GS~~~~~~~~~~~~~~al~~~-~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~pq~~il~~~~~~~~ 350 (468)
+.+|+.|.++ ...+.++... +..++.++... .+ ..+.+.++. + +..+-...+++..++++++
T Consensus 8 vgiiG~G~~g-------~~~~~~l~~~~~~~lvav~d~~----~~-~~~~~~~~~---g--~~~~~~~~~~l~~~~~D~V 70 (354)
T 3db2_A 8 VAAIGLGRWA-------YVMADAYTKSEKLKLVTCYSRT----ED-KREKFGKRY---N--CAGDATMEALLAREDVEMV 70 (354)
T ss_dssp EEEECCSHHH-------HHHHHHHTTCSSEEEEEEECSS----HH-HHHHHHHHH---T--CCCCSSHHHHHHCSSCCEE
T ss_pred EEEEccCHHH-------HHHHHHHHhCCCcEEEEEECCC----HH-HHHHHHHHc---C--CCCcCCHHHHhcCCCCCEE
Confidence 7788888875 3456677665 56666555433 00 001122221 2 2235567788866555555
Q ss_pred EecCCc----chHHHHHHhCCcEEe-ccccc--chhhHHHHHHhhcceeeeec
Q 044031 351 VTHCGW----SSVVEAVTYGVPMIA-WPLYA--EQFLNSVALVQEMKVAMPMF 396 (468)
Q Consensus 351 ithgG~----~s~~eal~~GvP~v~-~P~~~--DQ~~na~~~~~~~g~g~~~~ 396 (468)
+--.-. --+.+++.+|+++++ -|+.. +|-.-...++++.|+-+.+.
T Consensus 71 ~i~tp~~~h~~~~~~al~~gk~vl~EKP~~~~~~~~~~l~~~a~~~~~~~~v~ 123 (354)
T 3db2_A 71 IITVPNDKHAEVIEQCARSGKHIYVEKPISVSLDHAQRIDQVIKETGVKFLCG 123 (354)
T ss_dssp EECSCTTSHHHHHHHHHHTTCEEEEESSSCSSHHHHHHHHHHHHHHCCCEEEE
T ss_pred EEeCChHHHHHHHHHHHHcCCEEEEccCCCCCHHHHHHHHHHHHHcCCeEEEe
Confidence 533322 346678999998876 36543 33333333333335555554
No 282
>3g0o_A 3-hydroxyisobutyrate dehydrogenase; NAD(P), valine catabolism, tartaric acid, target 11128H, NYSGXRC, PSI-2, structural genomics; HET: TLA; 1.80A {Salmonella typhimurium}
Probab=20.38 E-value=56 Score=29.52 Aligned_cols=30 Identities=7% Similarity=-0.103 Sum_probs=25.1
Q ss_pred cceEEEecCCCccCHHHHHHHHHHHHhCCCCcEEEEE
Q 044031 2 KKTIALYPGPAFHHMISMVELGKLILQHRSDVSITIL 38 (468)
Q Consensus 2 ~~~Iv~~~~~~~GHv~P~l~LA~~L~~~G~~h~Vt~~ 38 (468)
+++|.|+-.|..|. .+|+.|+++| |+|+++
T Consensus 7 ~~~I~iIG~G~mG~-----~~a~~l~~~G--~~V~~~ 36 (303)
T 3g0o_A 7 DFHVGIVGLGSMGM-----GAARSCLRAG--LSTWGA 36 (303)
T ss_dssp CCEEEEECCSHHHH-----HHHHHHHHTT--CEEEEE
T ss_pred CCeEEEECCCHHHH-----HHHHHHHHCC--CeEEEE
Confidence 45799997776664 6899999999 999988
No 283
>2g1u_A Hypothetical protein TM1088A; structural genomics, joint center for structural genomics, J protein structure initiative, PSI-2; HET: AMP; 1.50A {Thermotoga maritima} PDB: 3l4b_A*
Probab=20.36 E-value=92 Score=24.57 Aligned_cols=31 Identities=13% Similarity=0.145 Sum_probs=23.2
Q ss_pred ceEEEecCCCccCHHHHHHHHHHHHhCCCCcEEEEEeC
Q 044031 3 KTIALYPGPAFHHMISMVELGKLILQHRSDVSITILVP 40 (468)
Q Consensus 3 ~~Iv~~~~~~~GHv~P~l~LA~~L~~~G~~h~Vt~~~~ 40 (468)
++|+++-. |.+ ...+|+.|.++| ++|+++..
T Consensus 20 ~~v~IiG~---G~i--G~~la~~L~~~g--~~V~vid~ 50 (155)
T 2g1u_A 20 KYIVIFGC---GRL--GSLIANLASSSG--HSVVVVDK 50 (155)
T ss_dssp CEEEEECC---SHH--HHHHHHHHHHTT--CEEEEEES
T ss_pred CcEEEECC---CHH--HHHHHHHHHhCC--CeEEEEEC
Confidence 47888754 433 356899999999 99999854
No 284
>3guy_A Short-chain dehydrogenase/reductase SDR; structural genomics, oxidoreductase, PSI-2, protein structur initiative; 1.90A {Vibrio parahaemolyticus}
Probab=20.34 E-value=75 Score=27.05 Aligned_cols=30 Identities=17% Similarity=0.073 Sum_probs=23.7
Q ss_pred EEEecCCCccCHHHHHHHHHHHHhCCCCcEEEEEe
Q 044031 5 IALYPGPAFHHMISMVELGKLILQHRSDVSITILV 39 (468)
Q Consensus 5 Iv~~~~~~~GHv~P~l~LA~~L~~~G~~h~Vt~~~ 39 (468)
+++++.++.| =..++|++|+++| ++|.++.
T Consensus 3 ~vlVTGas~g---IG~~~a~~l~~~G--~~V~~~~ 32 (230)
T 3guy_A 3 LIVITGASSG---LGAELAKLYDAEG--KATYLTG 32 (230)
T ss_dssp CEEEESTTSH---HHHHHHHHHHHTT--CCEEEEE
T ss_pred EEEEecCCch---HHHHHHHHHHHCC--CEEEEEe
Confidence 6777766543 4678999999999 9998884
No 285
>3i1j_A Oxidoreductase, short chain dehydrogenase/reducta; dimer, MIXE beta, structural genomics, PSI-2; 1.90A {Pseudomonas syringae PV} SCOP: c.2.1.0
Probab=20.33 E-value=1.3e+02 Score=25.69 Aligned_cols=33 Identities=21% Similarity=0.197 Sum_probs=25.4
Q ss_pred cceEEEecCCCccCHHHHHHHHHHHHhCCCCcEEEEEe
Q 044031 2 KKTIALYPGPAFHHMISMVELGKLILQHRSDVSITILV 39 (468)
Q Consensus 2 ~~~Iv~~~~~~~GHv~P~l~LA~~L~~~G~~h~Vt~~~ 39 (468)
+.++++++.++. - -..++|++|+++| ++|.++.
T Consensus 13 ~~k~vlITGas~-g--IG~~ia~~l~~~G--~~V~~~~ 45 (247)
T 3i1j_A 13 KGRVILVTGAAR-G--IGAAAARAYAAHG--ASVVLLG 45 (247)
T ss_dssp TTCEEEESSTTS-H--HHHHHHHHHHHTT--CEEEEEE
T ss_pred CCCEEEEeCCCC-h--HHHHHHHHHHHCC--CEEEEEe
Confidence 346888886654 2 3578999999999 9998874
No 286
>2ew8_A (S)-1-phenylethanol dehydrogenase; transferase; 2.10A {Azoarcus SP} SCOP: c.2.1.2 PDB: 2ewm_A*
Probab=20.33 E-value=1.3e+02 Score=25.97 Aligned_cols=33 Identities=15% Similarity=0.057 Sum_probs=25.3
Q ss_pred ceEEEecCCCccCHHHHHHHHHHHHhCCCCcEEEEEeC
Q 044031 3 KTIALYPGPAFHHMISMVELGKLILQHRSDVSITILVP 40 (468)
Q Consensus 3 ~~Iv~~~~~~~GHv~P~l~LA~~L~~~G~~h~Vt~~~~ 40 (468)
.++++++.++.| =..++|++|+++| ++|.++.-
T Consensus 7 ~k~vlVTGas~g---IG~~ia~~l~~~G--~~V~~~~r 39 (249)
T 2ew8_A 7 DKLAVITGGANG---IGRAIAERFAVEG--ADIAIADL 39 (249)
T ss_dssp TCEEEEETTTSH---HHHHHHHHHHHTT--CEEEEEES
T ss_pred CCEEEEeCCCcH---HHHHHHHHHHHCC--CEEEEEcC
Confidence 467788865543 3678999999999 99988843
No 287
>2pd6_A Estradiol 17-beta-dehydrogenase 8; short-chain dehydrogenase/reductase, steroid metabolism, LIP metabolism, structural genomics; HET: NAD; 2.00A {Homo sapiens}
Probab=20.31 E-value=1e+02 Score=26.64 Aligned_cols=32 Identities=9% Similarity=0.036 Sum_probs=24.6
Q ss_pred ceEEEecCCCccCHHHHHHHHHHHHhCCCCcEEEEEe
Q 044031 3 KTIALYPGPAFHHMISMVELGKLILQHRSDVSITILV 39 (468)
Q Consensus 3 ~~Iv~~~~~~~GHv~P~l~LA~~L~~~G~~h~Vt~~~ 39 (468)
.+.++++.++.| =..++|++|+++| ++|+++.
T Consensus 7 ~k~vlITGasgg---iG~~la~~l~~~G--~~V~~~~ 38 (264)
T 2pd6_A 7 SALALVTGAGSG---IGRAVSVRLAGEG--ATVAACD 38 (264)
T ss_dssp TCEEEEETTTSH---HHHHHHHHHHHTT--CEEEEEE
T ss_pred CCEEEEECCCCh---HHHHHHHHHHHCC--CEEEEEe
Confidence 467777755543 3578999999999 9998884
No 288
>2xdq_B Light-independent protochlorophyllide reductase S; oxidoreductase, DPOR, (bacterio)chlorophyll biosynthesis, photosynthesis; 2.40A {Thermosynechococcus elongatus}
Probab=20.24 E-value=54 Score=32.39 Aligned_cols=33 Identities=15% Similarity=0.068 Sum_probs=26.9
Q ss_pred HHHHHHHhhhcCCCccEEEe-cCcHHHhhhCCCCeEEE
Q 044031 95 NVFQALENISLTSKILSFII-TSTTSFSYHPNIPTYTY 131 (468)
Q Consensus 95 ~l~~ll~~~~~~~~pD~vI~-~~~~~vA~~lgIP~i~~ 131 (468)
.+.+++++. +||++|. .....+|+++|||++.+
T Consensus 363 el~~~i~~~----~pDl~ig~~~~r~~a~k~gip~~~i 396 (511)
T 2xdq_B 363 VVGDAIARV----EPAAIFGTQMERHVGKRLNIPCGVI 396 (511)
T ss_dssp HHHHHHHHH----CCSEEEECHHHHHHHHHHTCCEEEC
T ss_pred HHHHHHHhc----CCCEEEeccchHHHHHhcCCCeEec
Confidence 455667776 9999999 77778999999998864
No 289
>3h28_A Sulfide-quinone reductase; monotopic membrane protein, flavoprotein, polysulfur, oxidoreductase; HET: FAD DCQ LMT; 2.00A {Aquifex aeolicus} PDB: 3h27_A* 3h29_A* 3hyv_A* 3hyw_A* 3hyx_A*
Probab=20.24 E-value=66 Score=30.66 Aligned_cols=33 Identities=15% Similarity=0.178 Sum_probs=23.5
Q ss_pred CcceEEEecCCCccCHHHHHHHHHHHHh--CCCCcEEEEEeC
Q 044031 1 MKKTIALYPGPAFHHMISMVELGKLILQ--HRSDVSITILVP 40 (468)
Q Consensus 1 m~~~Iv~~~~~~~GHv~P~l~LA~~L~~--~G~~h~Vt~~~~ 40 (468)
|+.+|+++-.+..| +..|..|++ +| ++||++..
T Consensus 1 M~~~vvIIGgG~aG-----l~aA~~L~~~~~g--~~Vtlie~ 35 (430)
T 3h28_A 1 MAKHVVVIGGGVGG-----IATAYNLRNLMPD--LKITLISD 35 (430)
T ss_dssp -CCEEEEECSSHHH-----HHHHHHHHHHCTT--CEEEEECS
T ss_pred CCCCEEEECccHHH-----HHHHHHHHcCCCC--CeEEEECC
Confidence 77789988766555 456666776 77 99999943
No 290
>3uf0_A Short-chain dehydrogenase/reductase SDR; gluconate, gluconate 5-dehydratase, NAD(P) dependent, enzyme initiative, EFI, oxidoreductase; HET: NAP; 2.00A {Beutenbergia cavernae} SCOP: c.2.1.0
Probab=20.21 E-value=1e+02 Score=27.11 Aligned_cols=32 Identities=6% Similarity=-0.087 Sum_probs=25.9
Q ss_pred ceEEEecCCCccCHHHHHHHHHHHHhCCCCcEEEEEe
Q 044031 3 KTIALYPGPAFHHMISMVELGKLILQHRSDVSITILV 39 (468)
Q Consensus 3 ~~Iv~~~~~~~GHv~P~l~LA~~L~~~G~~h~Vt~~~ 39 (468)
.++++++.++.| =..++|++|+++| ++|.++.
T Consensus 31 gk~~lVTGas~G---IG~aia~~la~~G--~~V~~~~ 62 (273)
T 3uf0_A 31 GRTAVVTGAGSG---IGRAIAHGYARAG--AHVLAWG 62 (273)
T ss_dssp TCEEEEETTTSH---HHHHHHHHHHHTT--CEEEEEE
T ss_pred CCEEEEeCCCcH---HHHHHHHHHHHCC--CEEEEEc
Confidence 468888877654 4678999999999 9998885
No 291
>3tqr_A Phosphoribosylglycinamide formyltransferase; purines, pyrimidines, nucleosides, nucleotides; HET: NHE; 1.97A {Coxiella burnetii} SCOP: c.65.1.0
Probab=20.20 E-value=2e+02 Score=24.49 Aligned_cols=69 Identities=12% Similarity=0.173 Sum_probs=45.1
Q ss_pred HHHHHHHHhCCCcEEEEEeCCCCccccCCChhHHhhccCCCeEecCCCCHHhhhCccCcceEEecCCcchHHHHHHhCCc
Q 044031 289 KEIAIGLERSNQRFLWVVRNPSNAAEAELPEGFLERTKERGLVVKSWAPQSTILGHESVGGFVTHCGWSSVVEAVTYGVP 368 (468)
Q Consensus 289 ~~~~~al~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~pq~~il~~~~~~~~ithgG~~s~~eal~~GvP 368 (468)
.++.+.|+..+..++.+.+.. ..+|+.+.+......+-+ |++. .=...|+..+..|+.+|..
T Consensus 73 ~~~~~~l~~~~~Dliv~agy~-----~il~~~~l~~~~~~~iNi-----------HpSL--LP~yrG~~pi~~Ai~~G~~ 134 (215)
T 3tqr_A 73 STLQKTIDHYDPKLIVLAGFM-----RKLGKAFVSHYSGRMINI-----------HPSL--LPKYTGLNTHERALAAGET 134 (215)
T ss_dssp HHHHHHHHTTCCSEEEESSCC-----SCCCHHHHHHTTTSEEEE-----------ESSS--TTTTCSSCHHHHHHHTTCS
T ss_pred HHHHHHHHhcCCCEEEEccch-----hhCCHHHHhhccCCeEEe-----------Cccc--CCCCCChhHHHHHHHcCCC
Confidence 457777887788877777654 456666655433222222 3333 3345689999999999999
Q ss_pred EEecccc
Q 044031 369 MIAWPLY 375 (468)
Q Consensus 369 ~v~~P~~ 375 (468)
..++=.+
T Consensus 135 ~tGvTvh 141 (215)
T 3tqr_A 135 EHGVSVH 141 (215)
T ss_dssp EEEEEEE
T ss_pred eEEEEEE
Confidence 8877653
No 292
>3uve_A Carveol dehydrogenase ((+)-trans-carveol dehydrog; ssgcid, structural genomics, seattle structural genomics CEN infectious disease; HET: NAD PG4; 1.55A {Mycobacterium avium} SCOP: c.2.1.0 PDB: 3uwr_A*
Probab=20.17 E-value=1e+02 Score=27.24 Aligned_cols=33 Identities=15% Similarity=0.033 Sum_probs=26.9
Q ss_pred ceEEEecCCCccCHHHHHHHHHHHHhCCCCcEEEEEeC
Q 044031 3 KTIALYPGPAFHHMISMVELGKLILQHRSDVSITILVP 40 (468)
Q Consensus 3 ~~Iv~~~~~~~GHv~P~l~LA~~L~~~G~~h~Vt~~~~ 40 (468)
.++++++.++.| =..++|++|+++| ++|.++.-
T Consensus 11 ~k~~lVTGas~g---IG~aia~~la~~G--~~V~~~~~ 43 (286)
T 3uve_A 11 GKVAFVTGAARG---QGRSHAVRLAQEG--ADIIAVDI 43 (286)
T ss_dssp TCEEEEESTTSH---HHHHHHHHHHHTT--CEEEEEEC
T ss_pred CCEEEEeCCCch---HHHHHHHHHHHCC--CeEEEEec
Confidence 478899977765 4678999999999 99988854
No 293
>3t4x_A Oxidoreductase, short chain dehydrogenase/reducta; structural genomics, center for structural genomics of infec diseases, csgid; 2.80A {Bacillus anthracis}
Probab=20.11 E-value=1.1e+02 Score=26.84 Aligned_cols=32 Identities=13% Similarity=0.068 Sum_probs=25.6
Q ss_pred ceEEEecCCCccCHHHHHHHHHHHHhCCCCcEEEEEe
Q 044031 3 KTIALYPGPAFHHMISMVELGKLILQHRSDVSITILV 39 (468)
Q Consensus 3 ~~Iv~~~~~~~GHv~P~l~LA~~L~~~G~~h~Vt~~~ 39 (468)
.++++++.++.| =..++|++|+++| ++|.++.
T Consensus 10 ~k~~lVTGas~g---IG~aia~~l~~~G--~~V~~~~ 41 (267)
T 3t4x_A 10 GKTALVTGSTAG---IGKAIATSLVAEG--ANVLING 41 (267)
T ss_dssp TCEEEETTCSSH---HHHHHHHHHHHTT--CEEEEEE
T ss_pred CCEEEEeCCCcH---HHHHHHHHHHHCC--CEEEEEe
Confidence 368888876654 3678999999999 9998884
No 294
>3gk3_A Acetoacetyl-COA reductase; acetoacetyl-CO reductase, oxidoreductase, structural genomics; 2.10A {Burkholderia pseudomallei 1710B}
Probab=20.10 E-value=1.4e+02 Score=26.05 Aligned_cols=33 Identities=9% Similarity=0.107 Sum_probs=25.7
Q ss_pred cceEEEecCCCccCHHHHHHHHHHHHhCCCCcEEEEEe
Q 044031 2 KKTIALYPGPAFHHMISMVELGKLILQHRSDVSITILV 39 (468)
Q Consensus 2 ~~~Iv~~~~~~~GHv~P~l~LA~~L~~~G~~h~Vt~~~ 39 (468)
+.++++++.++.| =..++|++|+++| ++|.++.
T Consensus 24 ~~k~vlITGas~g---IG~~~a~~l~~~G--~~v~~~~ 56 (269)
T 3gk3_A 24 AKRVAFVTGGMGG---LGAAISRRLHDAG--MAVAVSH 56 (269)
T ss_dssp CCCEEEETTTTSH---HHHHHHHHHHTTT--CEEEEEE
T ss_pred cCCEEEEECCCch---HHHHHHHHHHHCC--CEEEEEc
Confidence 3468888866643 3578999999999 9998874
No 295
>3gpi_A NAD-dependent epimerase/dehydratase; structural genomics, unknown function, PSI-2, protein structure initiative; 1.44A {Methylobacillus flagellatus KT}
Probab=20.05 E-value=1e+02 Score=27.12 Aligned_cols=34 Identities=21% Similarity=0.147 Sum_probs=24.2
Q ss_pred Cc-ceEEEecCCCccCHHHHHHHHHHHHhCCCCcEEEEEeCC
Q 044031 1 MK-KTIALYPGPAFHHMISMVELGKLILQHRSDVSITILVPS 41 (468)
Q Consensus 1 m~-~~Iv~~~~~~~GHv~P~l~LA~~L~~~G~~h~Vt~~~~~ 41 (468)
|+ ++|++. |+ |. =...|+++|.++| |+|+.++-.
T Consensus 1 M~~~~ilVt--Ga-G~--iG~~l~~~L~~~g--~~V~~~~r~ 35 (286)
T 3gpi_A 1 MSLSKILIA--GC-GD--LGLELARRLTAQG--HEVTGLRRS 35 (286)
T ss_dssp -CCCCEEEE--CC-SH--HHHHHHHHHHHTT--CCEEEEECT
T ss_pred CCCCcEEEE--CC-CH--HHHHHHHHHHHCC--CEEEEEeCC
Confidence 54 456655 35 84 4668899999999 999998543
No 296
>3kjh_A CO dehydrogenase/acetyl-COA synthase complex, accessory protein COOC; Zn-bound dimer, nickel binding protein, ATPase; 1.90A {Carboxydothermus hydrogenoformans} PDB: 3kjg_A* 3kje_A 3kji_A*
Probab=20.02 E-value=63 Score=27.75 Aligned_cols=37 Identities=11% Similarity=-0.031 Sum_probs=32.0
Q ss_pred eEEEecCCCccCHHHHHHHHHHHHhCCCCcEEEEEeCCC
Q 044031 4 TIALYPGPAFHHMISMVELGKLILQHRSDVSITILVPSM 42 (468)
Q Consensus 4 ~Iv~~~~~~~GHv~P~l~LA~~L~~~G~~h~Vt~~~~~~ 42 (468)
+|++..-|+-|=..=...||..|+++| ++|.++-.+.
T Consensus 2 kI~vs~kGGvGKTt~a~~LA~~la~~g--~~VlliD~D~ 38 (254)
T 3kjh_A 2 KLAVAGKGGVGKTTVAAGLIKIMASDY--DKIYAVDGDP 38 (254)
T ss_dssp EEEEECSSSHHHHHHHHHHHHHHTTTC--SCEEEEEECT
T ss_pred EEEEecCCCCCHHHHHHHHHHHHHHCC--CeEEEEeCCC
Confidence 388866788899999999999999999 9999995554
Done!