BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= 044032
(401 letters)
Database: pdbaa
62,578 sequences; 14,973,337 total letters
Searching..................................................done
>pdb|2Q9F|A Chain A, Crystal Structure Of Human Cytochrome P450 46a1 In Complex
With Cholesterol-3-Sulphate
pdb|2Q9G|A Chain A, Crystal Structure Of Human Cytochrome P450 46a1
pdb|3MDM|A Chain A, Thioperamide Complex Of Cytochrome P450 46a1
pdb|3MDR|A Chain A, Tranylcypromine Complex Of Cytochrome P450 46a1
pdb|3MDR|B Chain B, Tranylcypromine Complex Of Cytochrome P450 46a1
pdb|3MDT|A Chain A, Voriconazole Complex Of Cytochrome P450 46a1
pdb|3MDT|B Chain B, Voriconazole Complex Of Cytochrome P450 46a1
pdb|3MDV|A Chain A, Clotrimazole Complex Of Cytochrome P450 46a1
pdb|3MDV|B Chain B, Clotrimazole Complex Of Cytochrome P450 46a1
pdb|4ENH|A Chain A, Crystal Structure Of Human Cytochrome P450 Cyp46a1 With
Fluvoxamine Bound
pdb|4FIA|A Chain A, Crystal Structure Of Human Cyp46a1 P450 With Bicalutamide
Bound
Length = 456
Score = 60.8 bits (146), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 73/300 (24%), Positives = 127/300 (42%), Gaps = 24/300 (8%)
Query: 103 LLGDGIFN-SDGDKWKFQRQVSSHEFNTKSLRKFVETVVETELSDRLIHILSAAAADKTV 161
L G G+ + + ++W QR+V F+ SL +ET E +++L+ IL A A +T
Sbjct: 72 LFGQGLVSECNYERWHKQRRVIDLAFSRSSLVSLMETF--NEKAEQLVEILEAKADGQTP 129
Query: 162 LDLQDMLQRFAFVNICKTAFGYDPEY-LSPSLPQAEFAKAFDDAVQTSAERFREPLRIFW 220
+ +QDML A + K AFG + L P ++ K + + S R L F
Sbjct: 130 VSMQDMLTYTAMDILAKAAFGMETSMLLGAQKPLSQAVKLMLEGITAS----RNTLAKFL 185
Query: 221 KIQRLLNIGSQKRLQVAICQVREFAXXXXXXXXXXXXXXXSPDES-MHLLSTFLSSLQY- 278
G +K+L+ +R +E +L+ L + +
Sbjct: 186 P-------GKRKQLREVRESIRFLRQVGRDWVQRRREALKRGEEVPADILTQILKAEEGA 238
Query: 279 ---ERQLYIVISFTLADRDTTSAPLTWIFWLLFRNPEAETPILKEIREKSDAPV---FED 332
E L ++F +A +T++ L + L R PE + E+ E + FED
Sbjct: 239 QDDEGLLDNFVTFFIAGHETSANHLAFTVMELSRQPEIVARLQAEVDEVIGSKRYLDFED 298
Query: 333 IKDMVFTHASLCESMRFYPPVPLDGKLAKKDDVWPDGKVIKKETRVTYHSYAMGRTEIKF 392
+ + + L ES+R YPP +L +++ + DG + T + + +Y MGR + F
Sbjct: 299 LGRLQYLSQVLKESLRLYPPAWGTFRLLEEETLI-DGVRVPGNTPLLFSTYVMGRMDTYF 357
>pdb|3K9V|A Chain A, Crystal Structure Of Rat Mitochondrial P450 24a1 S57d In
Complex With Chaps
pdb|3K9V|B Chain B, Crystal Structure Of Rat Mitochondrial P450 24a1 S57d In
Complex With Chaps
pdb|3K9Y|A Chain A, Crystal Structure Of Rat Mitochondrial P450 24a1 S57d In
Complex With Cymal-5
pdb|3K9Y|B Chain B, Crystal Structure Of Rat Mitochondrial P450 24a1 S57d In
Complex With Cymal-5
Length = 482
Score = 58.5 bits (140), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 37/118 (31%), Positives = 64/118 (54%), Gaps = 5/118 (4%)
Query: 279 ERQLYIVIS-FTLADRDTTSAPLTWIFWLLFRNPEAETPILKEIRE---KSDAPVFEDIK 334
+++LY ++ LA +TT+ L WI + L RNP+A+ +L+E++ + P ED++
Sbjct: 281 KKELYAAVTELQLAAVETTANSLMWILYNLSRNPQAQRRLLQEVQSVLPDNQTPRAEDLR 340
Query: 335 DMVFTHASLCESMRFYPPVPLDGKLAKKDDVWPDGKVIKKETRVTYHSYAMGRTEIKF 392
+M + A L ESMR P VP + K V + + K T +T ++ +G +E F
Sbjct: 341 NMPYLKACLKESMRLTPSVPFTTRTLDKPTVLGE-YALPKGTVLTLNTQVLGSSEDNF 397
>pdb|3EQM|A Chain A, Crystal Structure Of Human Placental Aromatase Cytochrome
P450 In Complex With Androstenedione
pdb|3S79|A Chain A, Human Placental Aromatase Cytochrome P450 (Cyp19a1)
Refined At 2.75 Angstrom
pdb|3S7S|A Chain A, Crystal Structure Of Human Placental Aromatase Complexed
With Breast Cancer Drug Exemestane
pdb|4GL5|A Chain A, Structure Of Human Placental Aromatase Complexed With
Designed Inhibitor Hddg029 (Compound 4)
pdb|4GL7|A Chain A, Structure Of Human Placental Aromatase Complexed With
Designed Inhibitor Hddg046 (Compound 5)
Length = 503
Score = 47.0 bits (110), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 34/108 (31%), Positives = 57/108 (52%), Gaps = 5/108 (4%)
Query: 285 VISFTLADRDTTSAPLTWIFWLLFRNPEAETPILKEIRE---KSDAPVFEDIKDMVFTHA 341
++ +A DT S L ++ +L+ ++P E I+KEI+ + D + +DI+ +
Sbjct: 300 ILEMLIAAPDTMSVSLFFMLFLIAKHPNVEEAIIKEIQTVIGERDIKI-DDIQKLKVMEN 358
Query: 342 SLCESMRFYPPVPLDGKLAKKDDVWPDGKVIKKETRVTYHSYAMGRTE 389
+ ESMR+ P V L + A +DDV DG +KK T + + M R E
Sbjct: 359 FIYESMRYQPVVDLVMRKALEDDVI-DGYPVKKGTNIILNIGRMHRLE 405
>pdb|1ZOA|A Chain A, Crystal Structure Of A328v Mutant Of The Heme Domain Of
P450bm-3 With N-Palmitoylglycine
pdb|1ZOA|B Chain B, Crystal Structure Of A328v Mutant Of The Heme Domain Of
P450bm-3 With N-Palmitoylglycine
Length = 473
Score = 43.1 bits (100), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 32/119 (26%), Positives = 58/119 (48%), Gaps = 18/119 (15%)
Query: 261 SPDESMHLLSTFLSS--------LQYERQLYIVISFTLADRDTTSAPLTWIFWLLFRNPE 312
S ++S LL+ L+ L E Y +I+F +A +TTS L++ + L +NP
Sbjct: 229 SGEQSDDLLTHMLNGKDPETGEPLDDENIRYQIITFLIAGHETTSGLLSFALYFLVKNPH 288
Query: 313 AETPILKEIREKSD------APVFEDIKDMVFTHASLCESMRFYPPVPLDGKLAKKDDV 365
+L++ E++ P ++ +K + + L E++R +P VP AK+D V
Sbjct: 289 ----VLQKAAEEAARVLVDPVPSYKQVKQLKYVGMVLNEALRLWPTVPAFSLYAKEDTV 343
>pdb|3CBD|A Chain A, Directed Evolution Of Cytochrome P450 Bm3, To Octane
Monoxygenase 139-3
pdb|3CBD|B Chain B, Directed Evolution Of Cytochrome P450 Bm3, To Octane
Monoxygenase 139-3
Length = 455
Score = 43.1 bits (100), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 24/89 (26%), Positives = 47/89 (52%), Gaps = 10/89 (11%)
Query: 283 YIVISFTLADRDTTSAPLTWIFWLLFRNPEAETPILKEIREKSD------APVFEDIKDM 336
Y +I+F +A +TTS L++ + L +NP +L+++ E++ P ++ +K +
Sbjct: 256 YQIITFLIAGHETTSGLLSFALYFLVKNPH----VLQKVAEEATRVLVDPVPSYKQVKQL 311
Query: 337 VFTHASLCESMRFYPPVPLDGKLAKKDDV 365
+ L E++R +P P AK+D V
Sbjct: 312 KYVGMVLNEALRLWPTAPAFSLYAKEDTV 340
>pdb|3EBS|A Chain A, Human Cytochrome P450 2a6 I208sI300FG301AS369G IN COMPLEX
With Phenacetin
pdb|3EBS|B Chain B, Human Cytochrome P450 2a6 I208sI300FG301AS369G IN COMPLEX
With Phenacetin
pdb|3EBS|C Chain C, Human Cytochrome P450 2a6 I208sI300FG301AS369G IN COMPLEX
With Phenacetin
pdb|3EBS|D Chain D, Human Cytochrome P450 2a6 I208sI300FG301AS369G IN COMPLEX
With Phenacetin
pdb|3T3Q|A Chain A, Human Cytochrome P450 2a6 I208sI300FG301AS369G IN COMPLEX
WITH Pilocarpine
pdb|3T3Q|B Chain B, Human Cytochrome P450 2a6 I208sI300FG301AS369G IN COMPLEX
WITH Pilocarpine
pdb|3T3Q|C Chain C, Human Cytochrome P450 2a6 I208sI300FG301AS369G IN COMPLEX
WITH Pilocarpine
pdb|3T3Q|D Chain D, Human Cytochrome P450 2a6 I208sI300FG301AS369G IN COMPLEX
WITH Pilocarpine
Length = 476
Score = 42.0 bits (97), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 32/122 (26%), Positives = 53/122 (43%), Gaps = 15/122 (12%)
Query: 262 PDESMHLLSTFLSSLQYERQ-----------LYIVISFTLADRDTTSAPLTWIFWLLFRN 310
P+ + +FL +Q E + + ++ A +T S L + F LL ++
Sbjct: 239 PNSPRDFIDSFLIRMQEEEKNPNTEFYLKNLVMTTLNLFFAGTETVSTTLRYGFLLLMKH 298
Query: 311 PEAETPILKEIRE---KSDAPVFEDIKDMVFTHASLCESMRFYPPVPLD-GKLAKKDDVW 366
PE E + +EI K+ P FED M + A + E RF +P+ + KKD +
Sbjct: 299 PEVEAKVHEEIDRVIGKNRQPKFEDRAKMPYMEAVIHEIQRFGDVIPMGLARRVKKDTKF 358
Query: 367 PD 368
D
Sbjct: 359 RD 360
>pdb|3KX3|A Chain A, Crystal Structure Of Bacillus Megaterium Bm3 Heme Domain
Mut
pdb|3KX3|B Chain B, Crystal Structure Of Bacillus Megaterium Bm3 Heme Domain
Mut
Length = 470
Score = 41.6 bits (96), Expect = 8e-04, Method: Compositional matrix adjust.
Identities = 31/119 (26%), Positives = 57/119 (47%), Gaps = 18/119 (15%)
Query: 261 SPDESMHLLSTFLSS--------LQYERQLYIVISFTLADRDTTSAPLTWIFWLLFRNPE 312
S ++S LL+ L+ L E Y +I+F +A +TTS L++ + L +NP
Sbjct: 226 SGEQSDDLLTHMLNGKDPETGEPLDDENIRYQIITFLIAGHETTSGLLSFALYFLVKNPH 285
Query: 313 AETPILKEIREKSD------APVFEDIKDMVFTHASLCESMRFYPPVPLDGKLAKKDDV 365
+L++ E++ P ++ +K + + L E++R +P P AK+D V
Sbjct: 286 ----VLQKAAEEAARVLVDPVPSYKQVKQLKYVGMVLNEALRLWPTAPAFSLYAKEDTV 340
>pdb|1JPZ|A Chain A, Crystal Structure Of A Complex Of The Heme Domain Of
P450bm- 3 With N-Palmitoylglycine
pdb|1JPZ|B Chain B, Crystal Structure Of A Complex Of The Heme Domain Of
P450bm- 3 With N-Palmitoylglycine
pdb|1ZO9|A Chain A, Crystal Structure Of The Wild Type Heme Domain Of P450bm-3
With N- Palmitoylmethionine
pdb|1ZO9|B Chain B, Crystal Structure Of The Wild Type Heme Domain Of P450bm-3
With N- Palmitoylmethionine
Length = 473
Score = 41.6 bits (96), Expect = 8e-04, Method: Compositional matrix adjust.
Identities = 31/119 (26%), Positives = 57/119 (47%), Gaps = 18/119 (15%)
Query: 261 SPDESMHLLSTFLSS--------LQYERQLYIVISFTLADRDTTSAPLTWIFWLLFRNPE 312
S ++S LL+ L+ L E Y +I+F +A +TTS L++ + L +NP
Sbjct: 229 SGEQSDDLLTHMLNGKDPETGEPLDDENIRYQIITFLIAGHETTSGLLSFALYFLVKNPH 288
Query: 313 AETPILKEIREKSD------APVFEDIKDMVFTHASLCESMRFYPPVPLDGKLAKKDDV 365
+L++ E++ P ++ +K + + L E++R +P P AK+D V
Sbjct: 289 ----VLQKAAEEAARVLVDPVPSYKQVKQLKYVGMVLNEALRLWPTAPAFSLYAKEDTV 343
>pdb|2IJ2|A Chain A, Atomic Structure Of The Heme Domain Of Flavocytochrome
P450- Bm3
pdb|2IJ2|B Chain B, Atomic Structure Of The Heme Domain Of Flavocytochrome
P450- Bm3
Length = 470
Score = 41.6 bits (96), Expect = 8e-04, Method: Compositional matrix adjust.
Identities = 31/119 (26%), Positives = 57/119 (47%), Gaps = 18/119 (15%)
Query: 261 SPDESMHLLSTFLSS--------LQYERQLYIVISFTLADRDTTSAPLTWIFWLLFRNPE 312
S ++S LL+ L+ L E Y +I+F +A +TTS L++ + L +NP
Sbjct: 226 SGEQSDDLLTHMLNGKDPETGEPLDDENIRYQIITFLIAGHETTSGLLSFALYFLVKNPH 285
Query: 313 AETPILKEIREKSD------APVFEDIKDMVFTHASLCESMRFYPPVPLDGKLAKKDDV 365
+L++ E++ P ++ +K + + L E++R +P P AK+D V
Sbjct: 286 ----VLQKAAEEAARVLVDPVPSYKQVKQLKYVGMVLNEALRLWPTAPAFSLYAKEDTV 340
>pdb|3NPL|A Chain A, Structure Of Ru(Bpy)2(A-Phen)(K97c) P450 Bm3 Heme Domain,
A Ruthenium Modified P450 Bm3 Mutant
pdb|3NPL|B Chain B, Structure Of Ru(Bpy)2(A-Phen)(K97c) P450 Bm3 Heme Domain,
A Ruthenium Modified P450 Bm3 Mutant
Length = 470
Score = 41.6 bits (96), Expect = 8e-04, Method: Compositional matrix adjust.
Identities = 31/119 (26%), Positives = 57/119 (47%), Gaps = 18/119 (15%)
Query: 261 SPDESMHLLSTFLSS--------LQYERQLYIVISFTLADRDTTSAPLTWIFWLLFRNPE 312
S ++S LL+ L+ L E Y +I+F +A +TTS L++ + L +NP
Sbjct: 227 SGEQSDDLLTHMLNGKDPETGEPLDDENIRYQIITFLIAGHETTSGLLSFALYFLVKNPH 286
Query: 313 AETPILKEIREKSD------APVFEDIKDMVFTHASLCESMRFYPPVPLDGKLAKKDDV 365
+L++ E++ P ++ +K + + L E++R +P P AK+D V
Sbjct: 287 ----VLQKAAEEAARVLVDPVPSYKQVKQLKYVGMVLNEALRLWPTAPAFSLYAKEDTV 341
>pdb|2HPD|A Chain A, Crystal Structure Of Hemoprotein Domain Of P450bm-3, A
Prototype For Microsomal P450's
pdb|2HPD|B Chain B, Crystal Structure Of Hemoprotein Domain Of P450bm-3, A
Prototype For Microsomal P450's
pdb|1FAG|A Chain A, Structure Of Cytochrome P450
pdb|1FAG|B Chain B, Structure Of Cytochrome P450
pdb|1FAG|C Chain C, Structure Of Cytochrome P450
pdb|1FAG|D Chain D, Structure Of Cytochrome P450
Length = 471
Score = 41.6 bits (96), Expect = 9e-04, Method: Compositional matrix adjust.
Identities = 31/119 (26%), Positives = 57/119 (47%), Gaps = 18/119 (15%)
Query: 261 SPDESMHLLSTFLSS--------LQYERQLYIVISFTLADRDTTSAPLTWIFWLLFRNPE 312
S ++S LL+ L+ L E Y +I+F +A +TTS L++ + L +NP
Sbjct: 226 SGEQSDDLLTHMLNGKDPETGEPLDDENIRYQIITFLIAGHETTSGLLSFALYFLVKNPH 285
Query: 313 AETPILKEIREKSD------APVFEDIKDMVFTHASLCESMRFYPPVPLDGKLAKKDDV 365
+L++ E++ P ++ +K + + L E++R +P P AK+D V
Sbjct: 286 ----VLQKAAEEAARVLVDPVPSYKQVKQLKYVGMVLNEALRLWPTAPAFSLYAKEDTV 340
>pdb|1P0X|A Chain A, F393y Mutant Heme Domain Of Flavocytochrome P450 Bm3
pdb|1P0X|B Chain B, F393y Mutant Heme Domain Of Flavocytochrome P450 Bm3
Length = 455
Score = 41.6 bits (96), Expect = 9e-04, Method: Compositional matrix adjust.
Identities = 31/119 (26%), Positives = 57/119 (47%), Gaps = 18/119 (15%)
Query: 261 SPDESMHLLSTFLSS--------LQYERQLYIVISFTLADRDTTSAPLTWIFWLLFRNPE 312
S ++S LL+ L+ L E Y +I+F +A +TTS L++ + L +NP
Sbjct: 226 SGEQSDDLLTHMLNGKDPETGEPLDDENIRYQIITFLIAGHETTSGLLSFALYFLVKNPH 285
Query: 313 AETPILKEIREKSD------APVFEDIKDMVFTHASLCESMRFYPPVPLDGKLAKKDDV 365
+L++ E++ P ++ +K + + L E++R +P P AK+D V
Sbjct: 286 ----VLQKAAEEAARVLVDPVPSYKQVKQLKYVGMVLNEALRLWPTAPAFSLYAKEDTV 340
>pdb|3HF2|A Chain A, Crystal Structure Of The I401p Mutant Of Cytochrome P450
Bm3
pdb|3HF2|B Chain B, Crystal Structure Of The I401p Mutant Of Cytochrome P450
Bm3
Length = 482
Score = 41.6 bits (96), Expect = 9e-04, Method: Compositional matrix adjust.
Identities = 31/119 (26%), Positives = 57/119 (47%), Gaps = 18/119 (15%)
Query: 261 SPDESMHLLSTFLSS--------LQYERQLYIVISFTLADRDTTSAPLTWIFWLLFRNPE 312
S ++S LL+ L+ L E Y +I+F +A +TTS L++ + L +NP
Sbjct: 227 SGEQSDDLLTHMLNGKDPETGEPLDDENIRYQIITFLIAGHETTSGLLSFALYFLVKNPH 286
Query: 313 AETPILKEIREKSD------APVFEDIKDMVFTHASLCESMRFYPPVPLDGKLAKKDDV 365
+L++ E++ P ++ +K + + L E++R +P P AK+D V
Sbjct: 287 ----VLQKAAEEAARVLVDPVPSYKQVKQLKYVGMVLNEALRLWPTAPAFSLYAKEDTV 341
>pdb|2BMH|A Chain A, Modeling Protein-Substrate Interactions In The Heme Domain
Of Cytochrome P450bm-3
pdb|2BMH|B Chain B, Modeling Protein-Substrate Interactions In The Heme Domain
Of Cytochrome P450bm-3
pdb|1BU7|A Chain A, Cryogenic Structure Of Cytochrome P450bm-3 Heme Domain
pdb|1BU7|B Chain B, Cryogenic Structure Of Cytochrome P450bm-3 Heme Domain
pdb|2J1M|A Chain A, P450 Bm3 Heme Domain In Complex With Dmso
pdb|2J1M|B Chain B, P450 Bm3 Heme Domain In Complex With Dmso
pdb|2J4S|A Chain A, P450 Bm3 Heme Domain In Complex With Dmso
pdb|2J4S|B Chain B, P450 Bm3 Heme Domain In Complex With Dmso
Length = 455
Score = 41.6 bits (96), Expect = 9e-04, Method: Compositional matrix adjust.
Identities = 31/119 (26%), Positives = 57/119 (47%), Gaps = 18/119 (15%)
Query: 261 SPDESMHLLSTFLSS--------LQYERQLYIVISFTLADRDTTSAPLTWIFWLLFRNPE 312
S ++S LL+ L+ L E Y +I+F +A +TTS L++ + L +NP
Sbjct: 226 SGEQSDDLLTHMLNGKDPETGEPLDDENIRYQIITFLIAGHETTSGLLSFALYFLVKNPH 285
Query: 313 AETPILKEIREKSD------APVFEDIKDMVFTHASLCESMRFYPPVPLDGKLAKKDDV 365
+L++ E++ P ++ +K + + L E++R +P P AK+D V
Sbjct: 286 ----VLQKAAEEAARVLVDPVPSYKQVKQLKYVGMVLNEALRLWPTAPAFSLYAKEDTV 340
>pdb|1JME|A Chain A, Crystal Structure Of Phe393his Cytochrome P450 Bm3
pdb|1JME|B Chain B, Crystal Structure Of Phe393his Cytochrome P450 Bm3
Length = 455
Score = 41.6 bits (96), Expect = 9e-04, Method: Compositional matrix adjust.
Identities = 31/119 (26%), Positives = 57/119 (47%), Gaps = 18/119 (15%)
Query: 261 SPDESMHLLSTFLSS--------LQYERQLYIVISFTLADRDTTSAPLTWIFWLLFRNPE 312
S ++S LL+ L+ L E Y +I+F +A +TTS L++ + L +NP
Sbjct: 226 SGEQSDDLLTHMLNGKDPETGEPLDDENIRYQIITFLIAGHETTSGLLSFALYFLVKNPH 285
Query: 313 AETPILKEIREKSD------APVFEDIKDMVFTHASLCESMRFYPPVPLDGKLAKKDDV 365
+L++ E++ P ++ +K + + L E++R +P P AK+D V
Sbjct: 286 ----VLQKAAEEAARVLVDPVPSYKQVKQLKYVGMVLNEALRLWPTAPAFSLYAKEDTV 340
>pdb|3BEN|A Chain A, Structure Of N-(12-Imidazolyl-Dodecanoyl)-L-Leucine
Inhibitor Bound To The Heme Domain Of Cytochrome
P450-Bm3
pdb|3BEN|B Chain B, Structure Of N-(12-Imidazolyl-Dodecanoyl)-L-Leucine
Inhibitor Bound To The Heme Domain Of Cytochrome
P450-Bm3
Length = 470
Score = 41.6 bits (96), Expect = 9e-04, Method: Compositional matrix adjust.
Identities = 31/119 (26%), Positives = 57/119 (47%), Gaps = 18/119 (15%)
Query: 261 SPDESMHLLSTFLSS--------LQYERQLYIVISFTLADRDTTSAPLTWIFWLLFRNPE 312
S ++S LL+ L+ L E Y +I+F +A +TTS L++ + L +NP
Sbjct: 227 SGEQSDDLLTHMLNGKDPETGEPLDDENIRYQIITFLIAGHETTSGLLSFALYFLVKNPH 286
Query: 313 AETPILKEIREKSD------APVFEDIKDMVFTHASLCESMRFYPPVPLDGKLAKKDDV 365
+L++ E++ P ++ +K + + L E++R +P P AK+D V
Sbjct: 287 ----VLQKAAEEAARVLVDPVPSYKQVKQLKYVGMVLNEALRLWPTAPAFSLYAKEDTV 341
>pdb|1BVY|A Chain A, Complex Of The Heme And Fmn-Binding Domains Of The
Cytochrome P450(Bm-3)
pdb|1BVY|B Chain B, Complex Of The Heme And Fmn-Binding Domains Of The
Cytochrome P450(Bm-3)
Length = 458
Score = 41.6 bits (96), Expect = 9e-04, Method: Compositional matrix adjust.
Identities = 31/119 (26%), Positives = 57/119 (47%), Gaps = 18/119 (15%)
Query: 261 SPDESMHLLSTFLSS--------LQYERQLYIVISFTLADRDTTSAPLTWIFWLLFRNPE 312
S ++S LL+ L+ L E Y +I+F +A +TTS L++ + L +NP
Sbjct: 226 SGEQSDDLLTHMLNGKDPETGEPLDDENIRYQIITFLIAGHETTSGLLSFALYFLVKNPH 285
Query: 313 AETPILKEIREKSD------APVFEDIKDMVFTHASLCESMRFYPPVPLDGKLAKKDDV 365
+L++ E++ P ++ +K + + L E++R +P P AK+D V
Sbjct: 286 ----VLQKAAEEAARVLVDPVPSYKQVKQLKYVGMVLNEALRLWPTAPAFSLYAKEDTV 340
>pdb|3KX4|A Chain A, Crystal Structure Of Bacillus Megaterium Bm3 Heme Domain
Mut
pdb|3KX4|B Chain B, Crystal Structure Of Bacillus Megaterium Bm3 Heme Domain
Mut
Length = 470
Score = 41.6 bits (96), Expect = 9e-04, Method: Compositional matrix adjust.
Identities = 31/119 (26%), Positives = 57/119 (47%), Gaps = 18/119 (15%)
Query: 261 SPDESMHLLSTFLSS--------LQYERQLYIVISFTLADRDTTSAPLTWIFWLLFRNPE 312
S ++S LL+ L+ L E Y +I+F +A +TTS L++ + L +NP
Sbjct: 226 SGEQSDDLLTHMLNGKDPETGEPLDDENIRYQIITFLIAGHETTSGLLSFALYFLVKNPH 285
Query: 313 AETPILKEIREKSD------APVFEDIKDMVFTHASLCESMRFYPPVPLDGKLAKKDDV 365
+L++ E++ P ++ +K + + L E++R +P P AK+D V
Sbjct: 286 ----VLQKAAEEAARVLVDPVPSYKQVKQLKYVGMVLNEALRLWPTAPAFSLYAKEDTV 340
>pdb|2UWH|A Chain A, Cytochrome P450 Bm3 Mutant In Complex With Palmitic Acid
pdb|2UWH|B Chain B, Cytochrome P450 Bm3 Mutant In Complex With Palmitic Acid
pdb|2UWH|C Chain C, Cytochrome P450 Bm3 Mutant In Complex With Palmitic Acid
pdb|2UWH|D Chain D, Cytochrome P450 Bm3 Mutant In Complex With Palmitic Acid
pdb|2UWH|E Chain E, Cytochrome P450 Bm3 Mutant In Complex With Palmitic Acid
pdb|2UWH|F Chain F, Cytochrome P450 Bm3 Mutant In Complex With Palmitic Acid
Length = 458
Score = 41.6 bits (96), Expect = 9e-04, Method: Compositional matrix adjust.
Identities = 31/119 (26%), Positives = 57/119 (47%), Gaps = 18/119 (15%)
Query: 261 SPDESMHLLSTFLSS--------LQYERQLYIVISFTLADRDTTSAPLTWIFWLLFRNPE 312
S ++S LL+ L+ L E Y +I+F +A +TTS L++ + L +NP
Sbjct: 226 SGEQSDDLLTHMLNGKDPETGEPLDDENIRYQIITFLIAGHETTSGLLSFALYFLVKNPH 285
Query: 313 AETPILKEIREKSD------APVFEDIKDMVFTHASLCESMRFYPPVPLDGKLAKKDDV 365
+L++ E++ P ++ +K + + L E++R +P P AK+D V
Sbjct: 286 ----VLQKAAEEAARVLVDPVPSYKQVKQLKYVGMVLNEALRLWPTAPAFSLYAKEDTV 340
>pdb|1P0W|A Chain A, F393w Mutant Heme Domain Of Flavocytochrome P450 Bm3
pdb|1P0W|B Chain B, F393w Mutant Heme Domain Of Flavocytochrome P450 Bm3
Length = 455
Score = 41.6 bits (96), Expect = 9e-04, Method: Compositional matrix adjust.
Identities = 31/119 (26%), Positives = 57/119 (47%), Gaps = 18/119 (15%)
Query: 261 SPDESMHLLSTFLSS--------LQYERQLYIVISFTLADRDTTSAPLTWIFWLLFRNPE 312
S ++S LL+ L+ L E Y +I+F +A +TTS L++ + L +NP
Sbjct: 226 SGEQSDDLLTHMLNGKDPETGEPLDDENIRYQIITFLIAGHETTSGLLSFALYFLVKNPH 285
Query: 313 AETPILKEIREKSD------APVFEDIKDMVFTHASLCESMRFYPPVPLDGKLAKKDDV 365
+L++ E++ P ++ +K + + L E++R +P P AK+D V
Sbjct: 286 ----VLQKAAEEAARVLVDPVPSYKQVKQLKYVGMVLNEALRLWPTAPAFSLYAKEDTV 340
>pdb|1P0V|A Chain A, F393a Mutant Heme Domain Of Flavocytochrome P450 Bm3
pdb|1P0V|B Chain B, F393a Mutant Heme Domain Of Flavocytochrome P450 Bm3
Length = 455
Score = 41.6 bits (96), Expect = 9e-04, Method: Compositional matrix adjust.
Identities = 31/119 (26%), Positives = 57/119 (47%), Gaps = 18/119 (15%)
Query: 261 SPDESMHLLSTFLSS--------LQYERQLYIVISFTLADRDTTSAPLTWIFWLLFRNPE 312
S ++S LL+ L+ L E Y +I+F +A +TTS L++ + L +NP
Sbjct: 226 SGEQSDDLLTHMLNGKDPETGEPLDDENIRYQIITFLIAGHETTSGLLSFALYFLVKNPH 285
Query: 313 AETPILKEIREKSD------APVFEDIKDMVFTHASLCESMRFYPPVPLDGKLAKKDDV 365
+L++ E++ P ++ +K + + L E++R +P P AK+D V
Sbjct: 286 ----VLQKAAEEAARVLVDPVPSYKQVKQLKYVGMVLNEALRLWPTAPAFSLYAKEDTV 340
>pdb|2X7Y|A Chain A, P450 Bm3 F87a In Complex With Dmso
pdb|2X7Y|B Chain B, P450 Bm3 F87a In Complex With Dmso
pdb|2X80|A Chain A, P450 Bm3 F87a In Complex With Dmso
pdb|2X80|B Chain B, P450 Bm3 F87a In Complex With Dmso
Length = 455
Score = 41.6 bits (96), Expect = 9e-04, Method: Compositional matrix adjust.
Identities = 31/119 (26%), Positives = 57/119 (47%), Gaps = 18/119 (15%)
Query: 261 SPDESMHLLSTFLSS--------LQYERQLYIVISFTLADRDTTSAPLTWIFWLLFRNPE 312
S ++S LL+ L+ L E Y +I+F +A +TTS L++ + L +NP
Sbjct: 226 SGEQSDDLLTHMLNGKDPETGEPLDDENIRYQIITFLIAGHETTSGLLSFALYFLVKNPH 285
Query: 313 AETPILKEIREKSD------APVFEDIKDMVFTHASLCESMRFYPPVPLDGKLAKKDDV 365
+L++ E++ P ++ +K + + L E++R +P P AK+D V
Sbjct: 286 ----VLQKAAEEAARVLVDPVPSYKQVKQLKYVGMVLNEALRLWPTAPAFSLYAKEDTV 340
>pdb|2NNB|A Chain A, The Q403k Mutnat Heme Domain Of Flavocytochrome P450 Bm3
pdb|2NNB|B Chain B, The Q403k Mutnat Heme Domain Of Flavocytochrome P450 Bm3
Length = 471
Score = 41.6 bits (96), Expect = 9e-04, Method: Compositional matrix adjust.
Identities = 31/119 (26%), Positives = 57/119 (47%), Gaps = 18/119 (15%)
Query: 261 SPDESMHLLSTFLSS--------LQYERQLYIVISFTLADRDTTSAPLTWIFWLLFRNPE 312
S ++S LL+ L+ L E Y +I+F +A +TTS L++ + L +NP
Sbjct: 226 SGEQSDDLLTHMLNGKDPETGEPLDDENIRYQIITFLIAGHETTSGLLSFALYFLVKNPH 285
Query: 313 AETPILKEIREKSD------APVFEDIKDMVFTHASLCESMRFYPPVPLDGKLAKKDDV 365
+L++ E++ P ++ +K + + L E++R +P P AK+D V
Sbjct: 286 ----VLQKAAEEAARVLVDPVPSYKQVKQLKYVGMVLNEALRLWPTAPAFSLYAKEDTV 340
>pdb|1Z10|A Chain A, Crystal Structure Of Human Microsomal P450 2a6 With
Coumarin Bound
pdb|1Z10|B Chain B, Crystal Structure Of Human Microsomal P450 2a6 With
Coumarin Bound
pdb|1Z10|C Chain C, Crystal Structure Of Human Microsomal P450 2a6 With
Coumarin Bound
pdb|1Z10|D Chain D, Crystal Structure Of Human Microsomal P450 2a6 With
Coumarin Bound
pdb|1Z11|A Chain A, Crystal Structure Of Human Microsomal P450 2a6 With
Methoxsalen Bound
pdb|1Z11|B Chain B, Crystal Structure Of Human Microsomal P450 2a6 With
Methoxsalen Bound
pdb|1Z11|C Chain C, Crystal Structure Of Human Microsomal P450 2a6 With
Methoxsalen Bound
pdb|1Z11|D Chain D, Crystal Structure Of Human Microsomal P450 2a6 With
Methoxsalen Bound
pdb|2FDU|A Chain A, Microsomal P450 2a6 With The Inhibitor N,N-Dimethyl(5-
(Pyridin-3-Yl)furan-2-Yl)methanamine Bound
pdb|2FDU|B Chain B, Microsomal P450 2a6 With The Inhibitor N,N-Dimethyl(5-
(Pyridin-3-Yl)furan-2-Yl)methanamine Bound
pdb|2FDU|C Chain C, Microsomal P450 2a6 With The Inhibitor N,N-Dimethyl(5-
(Pyridin-3-Yl)furan-2-Yl)methanamine Bound
pdb|2FDU|D Chain D, Microsomal P450 2a6 With The Inhibitor N,N-Dimethyl(5-
(Pyridin-3-Yl)furan-2-Yl)methanamine Bound
pdb|2FDV|A Chain A, Microsomal P450 2a6 With The Inhibitor
N-Methyl(5-(Pyridin- 3-Yl)furan-2-Yl)methanamine Bound
pdb|2FDV|B Chain B, Microsomal P450 2a6 With The Inhibitor
N-Methyl(5-(Pyridin- 3-Yl)furan-2-Yl)methanamine Bound
pdb|2FDV|C Chain C, Microsomal P450 2a6 With The Inhibitor
N-Methyl(5-(Pyridin- 3-Yl)furan-2-Yl)methanamine Bound
pdb|2FDV|D Chain D, Microsomal P450 2a6 With The Inhibitor
N-Methyl(5-(Pyridin- 3-Yl)furan-2-Yl)methanamine Bound
pdb|2FDW|A Chain A, Crystal Structure Of Human Microsomal P450 2a6 With The
Inhibitor (5-(Pyridin-3-Yl)furan-2-Yl)methanamine Bound
pdb|2FDW|B Chain B, Crystal Structure Of Human Microsomal P450 2a6 With The
Inhibitor (5-(Pyridin-3-Yl)furan-2-Yl)methanamine Bound
pdb|2FDW|C Chain C, Crystal Structure Of Human Microsomal P450 2a6 With The
Inhibitor (5-(Pyridin-3-Yl)furan-2-Yl)methanamine Bound
pdb|2FDW|D Chain D, Crystal Structure Of Human Microsomal P450 2a6 With The
Inhibitor (5-(Pyridin-3-Yl)furan-2-Yl)methanamine Bound
pdb|2FDY|A Chain A, Microsomal P450 2a6 With The Inhibitor Adrithiol Bound
pdb|2FDY|B Chain B, Microsomal P450 2a6 With The Inhibitor Adrithiol Bound
pdb|2FDY|C Chain C, Microsomal P450 2a6 With The Inhibitor Adrithiol Bound
pdb|2FDY|D Chain D, Microsomal P450 2a6 With The Inhibitor Adrithiol Bound
pdb|3T3R|A Chain A, Human Cytochrome P450 2a6 In Complex With Pilocarpine
pdb|3T3R|B Chain B, Human Cytochrome P450 2a6 In Complex With Pilocarpine
pdb|3T3R|C Chain C, Human Cytochrome P450 2a6 In Complex With Pilocarpine
pdb|3T3R|D Chain D, Human Cytochrome P450 2a6 In Complex With Pilocarpine
pdb|4EJJ|A Chain A, Human Cytochrome P450 2a6 In Complex With Nicotine
pdb|4EJJ|B Chain B, Human Cytochrome P450 2a6 In Complex With Nicotine
pdb|4EJJ|C Chain C, Human Cytochrome P450 2a6 In Complex With Nicotine
pdb|4EJJ|D Chain D, Human Cytochrome P450 2a6 In Complex With Nicotine
Length = 476
Score = 41.6 bits (96), Expect = 9e-04, Method: Compositional matrix adjust.
Identities = 31/122 (25%), Positives = 53/122 (43%), Gaps = 15/122 (12%)
Query: 262 PDESMHLLSTFLSSLQYERQ-----------LYIVISFTLADRDTTSAPLTWIFWLLFRN 310
P+ + +FL +Q E + + ++ + +T S L + F LL ++
Sbjct: 239 PNSPRDFIDSFLIRMQEEEKNPNTEFYLKNLVMTTLNLFIGGTETVSTTLRYGFLLLMKH 298
Query: 311 PEAETPILKEIRE---KSDAPVFEDIKDMVFTHASLCESMRFYPPVPLD-GKLAKKDDVW 366
PE E + +EI K+ P FED M + A + E RF +P+ + KKD +
Sbjct: 299 PEVEAKVHEEIDRVIGKNRQPKFEDRAKMPYMEAVIHEIQRFGDVIPMSLARRVKKDTKF 358
Query: 367 PD 368
D
Sbjct: 359 RD 360
>pdb|2PG6|A Chain A, Crystal Structure Of Human Microsomal P450 2a6 L240cN297Q
pdb|2PG6|B Chain B, Crystal Structure Of Human Microsomal P450 2a6 L240cN297Q
pdb|2PG6|C Chain C, Crystal Structure Of Human Microsomal P450 2a6 L240cN297Q
pdb|2PG6|D Chain D, Crystal Structure Of Human Microsomal P450 2a6 L240cN297Q
Length = 476
Score = 41.2 bits (95), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 32/112 (28%), Positives = 53/112 (47%), Gaps = 14/112 (12%)
Query: 261 SPDESMHLLSTFLSSLQYERQLYIVISFTLADRDTTSAPLTWIFWLLFRNPEAETPILKE 320
+P+ +L + +++LQ L+I +T S L + F LL ++PE E + +E
Sbjct: 259 NPNTEFYLKNLVMTTLQ----LFI------GGTETVSTTLRYGFLLLMKHPEVEAKVHEE 308
Query: 321 IRE---KSDAPVFEDIKDMVFTHASLCESMRFYPPVPLD-GKLAKKDDVWPD 368
I K+ P FED M + A + E RF +P+ + KKD + D
Sbjct: 309 IDRVIGKNRQPKFEDRAKMPYMEAVIHEIQRFGDVIPMSLARRVKKDTKFRD 360
>pdb|2PG5|A Chain A, Crystal Structure Of Human Microsomal P450 2a6 N297q
pdb|2PG5|B Chain B, Crystal Structure Of Human Microsomal P450 2a6 N297q
pdb|2PG5|C Chain C, Crystal Structure Of Human Microsomal P450 2a6 N297q
pdb|2PG5|D Chain D, Crystal Structure Of Human Microsomal P450 2a6 N297q
Length = 476
Score = 41.2 bits (95), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 32/112 (28%), Positives = 53/112 (47%), Gaps = 14/112 (12%)
Query: 261 SPDESMHLLSTFLSSLQYERQLYIVISFTLADRDTTSAPLTWIFWLLFRNPEAETPILKE 320
+P+ +L + +++LQ L+I +T S L + F LL ++PE E + +E
Sbjct: 259 NPNTEFYLKNLVMTTLQ----LFI------GGTETVSTTLRYGFLLLMKHPEVEAKVHEE 308
Query: 321 IRE---KSDAPVFEDIKDMVFTHASLCESMRFYPPVPLD-GKLAKKDDVWPD 368
I K+ P FED M + A + E RF +P+ + KKD + D
Sbjct: 309 IDRVIGKNRQPKFEDRAKMPYMEAVIHEIQRFGDVIPMSLARRVKKDTKFRD 360
>pdb|3QI8|B Chain B, Evolved Variant Of Cytochrome P450 (Bm3, Cyp102a1)
pdb|3QI8|A Chain A, Evolved Variant Of Cytochrome P450 (Bm3, Cyp102a1)
Length = 472
Score = 41.2 bits (95), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 24/87 (27%), Positives = 45/87 (51%), Gaps = 10/87 (11%)
Query: 283 YIVISFTLADRDTTSAPLTWIFWLLFRNPEAETPILKEIREKSD------APVFEDIKDM 336
Y +I+F +A +TTS LT+ + L +NP +L++ E++ P ++ +K +
Sbjct: 257 YQIITFLIAGHETTSGLLTFALYFLVKNPH----VLQKAAEEAARVLVDPVPSYKQVKQL 312
Query: 337 VFTHASLCESMRFYPPVPLDGKLAKKD 363
+ L E++R +P P AK+D
Sbjct: 313 KYVGMVLNEALRIWPTAPAFSLYAKED 339
>pdb|2P85|A Chain A, Structure Of Human Lung Cytochrome P450 2a13 With Indole
Bound In Two Alternate Conformations
pdb|2P85|B Chain B, Structure Of Human Lung Cytochrome P450 2a13 With Indole
Bound In Two Alternate Conformations
pdb|2P85|C Chain C, Structure Of Human Lung Cytochrome P450 2a13 With Indole
Bound In Two Alternate Conformations
pdb|2P85|D Chain D, Structure Of Human Lung Cytochrome P450 2a13 With Indole
Bound In Two Alternate Conformations
pdb|2P85|E Chain E, Structure Of Human Lung Cytochrome P450 2a13 With Indole
Bound In Two Alternate Conformations
pdb|2P85|F Chain F, Structure Of Human Lung Cytochrome P450 2a13 With Indole
Bound In Two Alternate Conformations
pdb|3T3S|A Chain A, Human Cytochrome P450 2a13 In Complex With Pilocarpine
pdb|3T3S|B Chain B, Human Cytochrome P450 2a13 In Complex With Pilocarpine
pdb|3T3S|C Chain C, Human Cytochrome P450 2a13 In Complex With Pilocarpine
pdb|3T3S|D Chain D, Human Cytochrome P450 2a13 In Complex With Pilocarpine
pdb|3T3S|E Chain E, Human Cytochrome P450 2a13 In Complex With Pilocarpine
pdb|3T3S|F Chain F, Human Cytochrome P450 2a13 In Complex With Pilocarpine
pdb|3T3S|G Chain G, Human Cytochrome P450 2a13 In Complex With Pilocarpine
pdb|3T3S|H Chain H, Human Cytochrome P450 2a13 In Complex With Pilocarpine
pdb|4EJG|A Chain A, Human Cytochrome P450 2a13 In Complex With Nicotine
pdb|4EJG|B Chain B, Human Cytochrome P450 2a13 In Complex With Nicotine
pdb|4EJG|C Chain C, Human Cytochrome P450 2a13 In Complex With Nicotine
pdb|4EJG|D Chain D, Human Cytochrome P450 2a13 In Complex With Nicotine
pdb|4EJG|E Chain E, Human Cytochrome P450 2a13 In Complex With Nicotine
pdb|4EJG|F Chain F, Human Cytochrome P450 2a13 In Complex With Nicotine
pdb|4EJG|G Chain G, Human Cytochrome P450 2a13 In Complex With Nicotine
pdb|4EJG|H Chain H, Human Cytochrome P450 2a13 In Complex With Nicotine
pdb|4EJH|A Chain A, Human Cytochrome P450 2a13 In Complex With
4-(Methylnitrosamino)-1-(3- Pyridyl)-1-Butanone (Nnk)
pdb|4EJH|B Chain B, Human Cytochrome P450 2a13 In Complex With
4-(Methylnitrosamino)-1-(3- Pyridyl)-1-Butanone (Nnk)
pdb|4EJH|C Chain C, Human Cytochrome P450 2a13 In Complex With
4-(Methylnitrosamino)-1-(3- Pyridyl)-1-Butanone (Nnk)
pdb|4EJH|D Chain D, Human Cytochrome P450 2a13 In Complex With
4-(Methylnitrosamino)-1-(3- Pyridyl)-1-Butanone (Nnk)
pdb|4EJH|E Chain E, Human Cytochrome P450 2a13 In Complex With
4-(Methylnitrosamino)-1-(3- Pyridyl)-1-Butanone (Nnk)
pdb|4EJH|F Chain F, Human Cytochrome P450 2a13 In Complex With
4-(Methylnitrosamino)-1-(3- Pyridyl)-1-Butanone (Nnk)
pdb|4EJH|G Chain G, Human Cytochrome P450 2a13 In Complex With
4-(Methylnitrosamino)-1-(3- Pyridyl)-1-Butanone (Nnk)
pdb|4EJH|H Chain H, Human Cytochrome P450 2a13 In Complex With
4-(Methylnitrosamino)-1-(3- Pyridyl)-1-Butanone (Nnk)
pdb|4EJI|A Chain A, Human Cytochrome P450 2a13 In Complex With Two Molecules
Of 4- (Methylnitrosamino)-1-(3-Puridyl)-1-Butanone
Length = 476
Score = 41.2 bits (95), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 29/108 (26%), Positives = 48/108 (44%), Gaps = 14/108 (12%)
Query: 262 PDESMHLLSTFLSSLQYERQ-----------LYIVISFTLADRDTTSAPLTWIFWLLFRN 310
P+ + +FL +Q E + + ++ A +T S L + F LL ++
Sbjct: 239 PNSPRDFIDSFLIRMQEEEKNPNTEFYLKNLVMTTLNLFFAGTETVSTTLRYGFLLLMKH 298
Query: 311 PEAETPILKEIRE---KSDAPVFEDIKDMVFTHASLCESMRFYPPVPL 355
PE E + +EI K+ P FED M +T A + E RF +P+
Sbjct: 299 PEVEAKVHEEIDRVIGKNRQPKFEDRAKMPYTEAVIHEIQRFGDMLPM 346
>pdb|3PSX|A Chain A, Crystal Structure Of The Kt2 Mutant Of Cytochrome P450 Bm3
pdb|3PSX|B Chain B, Crystal Structure Of The Kt2 Mutant Of Cytochrome P450 Bm3
Length = 487
Score = 40.8 bits (94), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 23/89 (25%), Positives = 46/89 (51%), Gaps = 10/89 (11%)
Query: 283 YIVISFTLADRDTTSAPLTWIFWLLFRNPEAETPILKEIREKSD------APVFEDIKDM 336
Y +++F +A +TTS L++ + L +NP +L++ E++ P ++ +K +
Sbjct: 262 YQIVTFLIAGHETTSGLLSFTLYFLVKNPH----VLQKAAEEAARVLVDPVPSYKQVKQL 317
Query: 337 VFTHASLCESMRFYPPVPLDGKLAKKDDV 365
+ L E++R +P P AK+D V
Sbjct: 318 KYVGMVLNEALRLWPTAPAFSLYAKEDTV 346
>pdb|1ZO4|A Chain A, Crystal Structure Of A328s Mutant Of The Heme Domain Of
P450bm-3
pdb|1ZO4|B Chain B, Crystal Structure Of A328s Mutant Of The Heme Domain Of
P450bm-3
Length = 473
Score = 40.8 bits (94), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 31/119 (26%), Positives = 57/119 (47%), Gaps = 18/119 (15%)
Query: 261 SPDESMHLLSTFLSS--------LQYERQLYIVISFTLADRDTTSAPLTWIFWLLFRNPE 312
S ++S LL+ L+ L E Y +I+F +A +TTS L++ + L +NP
Sbjct: 229 SGEQSDDLLTHMLNGKDPETGEPLDDENIRYQIITFLIAGHETTSGLLSFALYFLVKNPH 288
Query: 313 AETPILKEIREKSD------APVFEDIKDMVFTHASLCESMRFYPPVPLDGKLAKKDDV 365
+L++ E++ P ++ +K + + L E++R +P P AK+D V
Sbjct: 289 ----VLQKAAEEAARVLVDPVPSYKQVKQLKYVGMVLNEALRLWPTSPAFSLYAKEDTV 343
>pdb|2PG7|A Chain A, Crystal Structure Of Human Microsomal P450 2a6 N297qI300V
pdb|2PG7|B Chain B, Crystal Structure Of Human Microsomal P450 2a6 N297qI300V
pdb|2PG7|C Chain C, Crystal Structure Of Human Microsomal P450 2a6 N297qI300V
pdb|2PG7|D Chain D, Crystal Structure Of Human Microsomal P450 2a6 N297qI300V
Length = 476
Score = 40.8 bits (94), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 31/122 (25%), Positives = 52/122 (42%), Gaps = 15/122 (12%)
Query: 262 PDESMHLLSTFLSSLQYERQ-----------LYIVISFTLADRDTTSAPLTWIFWLLFRN 310
P+ + +FL +Q E + + + + +T S L + F LL ++
Sbjct: 239 PNSPRDFIDSFLIRMQEEEKNPNTEFYLKNLVMTTLQLFVGGTETVSTTLRYGFLLLMKH 298
Query: 311 PEAETPILKEIRE---KSDAPVFEDIKDMVFTHASLCESMRFYPPVPLD-GKLAKKDDVW 366
PE E + +EI K+ P FED M + A + E RF +P+ + KKD +
Sbjct: 299 PEVEAKVHEEIDRVIGKNRQPKFEDRAKMPYMEAVIHEIQRFGDVIPMSLARRVKKDTKF 358
Query: 367 PD 368
D
Sbjct: 359 RD 360
>pdb|3M4V|A Chain A, Crystal Structure Of The A330p Mutant Of Cytochrome P450
Bm3
pdb|3M4V|B Chain B, Crystal Structure Of The A330p Mutant Of Cytochrome P450
Bm3
Length = 482
Score = 40.8 bits (94), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 31/119 (26%), Positives = 57/119 (47%), Gaps = 18/119 (15%)
Query: 261 SPDESMHLLSTFLSS--------LQYERQLYIVISFTLADRDTTSAPLTWIFWLLFRNPE 312
S ++S LL+ L+ L E Y +I+F +A +TTS L++ + L +NP
Sbjct: 227 SGEQSDDLLTHMLNGKDPETGEPLDDENIRYQIITFLIAGHETTSGLLSFALYFLVKNPH 286
Query: 313 AETPILKEIREKSD------APVFEDIKDMVFTHASLCESMRFYPPVPLDGKLAKKDDV 365
+L++ E++ P ++ +K + + L E++R +P P AK+D V
Sbjct: 287 ----VLQKAAEEAARVLVDPVPSYKQVKQLKYVGMVLNEALRLWPTAPPFSLYAKEDTV 341
>pdb|3CZH|A Chain A, Crystal Structure Of Cyp2r1 In Complex With Vitamin D2
pdb|3CZH|B Chain B, Crystal Structure Of Cyp2r1 In Complex With Vitamin D2
Length = 481
Score = 40.4 bits (93), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 32/115 (27%), Positives = 50/115 (43%), Gaps = 3/115 (2%)
Query: 274 SSLQYERQLYIVISFTLADRDTTSAPLTWIFWLLFRNPEAETPILKEI---REKSDAPVF 330
S+ E ++ V +A +TT+ L W + P + + KEI + P +
Sbjct: 267 STFSKENLIFSVGELIIAGTETTTNVLRWAILFMALYPNIQGQVQKEIDLIMGPNGKPSW 326
Query: 331 EDIKDMVFTHASLCESMRFYPPVPLDGKLAKKDDVWPDGKVIKKETRVTYHSYAM 385
+D M +T A L E +RF VPL A +D G I K T V + Y++
Sbjct: 327 DDKCKMPYTEAVLHEVLRFCNIVPLGIFHATSEDAVVRGYSIPKGTTVITNLYSV 381
>pdb|3C6G|A Chain A, Crystal Structure Of Cyp2r1 In Complex With Vitamin D3
pdb|3C6G|B Chain B, Crystal Structure Of Cyp2r1 In Complex With Vitamin D3
pdb|3DL9|A Chain A, Crystal Structure Of Cyp2r1 In Complex With
1-Alpha-Hydroxy- Vitamin D2
pdb|3DL9|B Chain B, Crystal Structure Of Cyp2r1 In Complex With
1-Alpha-Hydroxy- Vitamin D2
Length = 479
Score = 40.4 bits (93), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 32/115 (27%), Positives = 50/115 (43%), Gaps = 3/115 (2%)
Query: 274 SSLQYERQLYIVISFTLADRDTTSAPLTWIFWLLFRNPEAETPILKEI---REKSDAPVF 330
S+ E ++ V +A +TT+ L W + P + + KEI + P +
Sbjct: 267 STFSKENLIFSVGELIIAGTETTTNVLRWAILFMALYPNIQGQVQKEIDLIMGPNGKPSW 326
Query: 331 EDIKDMVFTHASLCESMRFYPPVPLDGKLAKKDDVWPDGKVIKKETRVTYHSYAM 385
+D M +T A L E +RF VPL A +D G I K T V + Y++
Sbjct: 327 DDKCKMPYTEAVLHEVLRFCNIVPLGIFHATSEDAVVRGYSIPKGTTVITNLYSV 381
>pdb|4DUD|A Chain A, Cytochrome P450 Bm3h-2g9c6 Mri Sensor, No Ligand
pdb|4DUD|B Chain B, Cytochrome P450 Bm3h-2g9c6 Mri Sensor, No Ligand
pdb|4DUE|A Chain A, Cytochrome P450 Bm3h-2g9c6 Mri Sensor Bound To Serotonin
pdb|4DUE|B Chain B, Cytochrome P450 Bm3h-2g9c6 Mri Sensor Bound To Serotonin
Length = 471
Score = 40.0 bits (92), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 30/119 (25%), Positives = 57/119 (47%), Gaps = 18/119 (15%)
Query: 261 SPDESMHLLSTFLSS--------LQYERQLYIVISFTLADRDTTSAPLTWIFWLLFRNPE 312
S ++S LL+ L+ L E Y +I+F +A ++TS L++ + L +NP
Sbjct: 226 SGEQSDDLLTHMLNGKDPETGEPLDDENIRYQIITFLIAGHESTSGLLSFALYFLVKNPH 285
Query: 313 AETPILKEIREKSD------APVFEDIKDMVFTHASLCESMRFYPPVPLDGKLAKKDDV 365
+L++ E++ P ++ +K + + L E++R +P P AK+D V
Sbjct: 286 ----VLQKAAEEAARVLVDPVPSYKQVKQLKYVGMVLNEALRLWPTAPAFSLYAKEDTV 340
>pdb|3EKB|A Chain A, Crystal Structure Of The A264c Mutant Heme Domain Of
Cytochrome P450 Bm3
pdb|3EKB|B Chain B, Crystal Structure Of The A264c Mutant Heme Domain Of
Cytochrome P450 Bm3
Length = 470
Score = 40.0 bits (92), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 30/119 (25%), Positives = 56/119 (47%), Gaps = 18/119 (15%)
Query: 261 SPDESMHLLSTFLSS--------LQYERQLYIVISFTLADRDTTSAPLTWIFWLLFRNPE 312
S ++S LL+ L+ L E Y +I+F + +TTS L++ + L +NP
Sbjct: 226 SGEQSDDLLTHMLNGKDPETGEPLDDENIRYQIITFLICGHETTSGLLSFALYFLVKNPH 285
Query: 313 AETPILKEIREKSD------APVFEDIKDMVFTHASLCESMRFYPPVPLDGKLAKKDDV 365
+L++ E++ P ++ +K + + L E++R +P P AK+D V
Sbjct: 286 ----VLQKAAEEAARVLVDPVPSYKQVKQLKYVGMVLNEALRLWPTAPAFSLYAKEDTV 340
>pdb|4DUC|A Chain A, Cytochrome P450 Bm3h-2g9 Mri Sensor, No Ligand
pdb|4DUC|B Chain B, Cytochrome P450 Bm3h-2g9 Mri Sensor, No Ligand
Length = 472
Score = 40.0 bits (92), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 30/119 (25%), Positives = 57/119 (47%), Gaps = 18/119 (15%)
Query: 261 SPDESMHLLSTFLSS--------LQYERQLYIVISFTLADRDTTSAPLTWIFWLLFRNPE 312
S ++S LL+ L+ L E Y +I+F +A ++TS L++ + L +NP
Sbjct: 227 SGEQSDDLLTHMLNGKDPETGEPLDDENIRYQIITFLIAGHESTSGLLSFALYFLVKNPH 286
Query: 313 AETPILKEIREKSD------APVFEDIKDMVFTHASLCESMRFYPPVPLDGKLAKKDDV 365
+L++ E++ P ++ +K + + L E++R +P P AK+D V
Sbjct: 287 ----VLQKAAEEAARVLVDPVPSYKQVKQLKYVGMVLNEALRLWPTAPAFSLYAKEDTV 341
>pdb|4DUF|A Chain A, Cytochrome P450 Bm3h-2g9 Mri Sensor Bound To Serotonin
pdb|4DUF|B Chain B, Cytochrome P450 Bm3h-2g9 Mri Sensor Bound To Serotonin
pdb|4DUF|C Chain C, Cytochrome P450 Bm3h-2g9 Mri Sensor Bound To Serotonin
pdb|4DUF|D Chain D, Cytochrome P450 Bm3h-2g9 Mri Sensor Bound To Serotonin
Length = 471
Score = 40.0 bits (92), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 30/119 (25%), Positives = 57/119 (47%), Gaps = 18/119 (15%)
Query: 261 SPDESMHLLSTFLSS--------LQYERQLYIVISFTLADRDTTSAPLTWIFWLLFRNPE 312
S ++S LL+ L+ L E Y +I+F +A ++TS L++ + L +NP
Sbjct: 226 SGEQSDDLLTHMLNGKDPETGEPLDDENIRYQIITFLIAGHESTSGLLSFALYFLVKNPH 285
Query: 313 AETPILKEIREKSD------APVFEDIKDMVFTHASLCESMRFYPPVPLDGKLAKKDDV 365
+L++ E++ P ++ +K + + L E++R +P P AK+D V
Sbjct: 286 ----VLQKAAEEAARVLVDPVPSYKQVKQLKYVGMVLNEALRLWPTAPAFSLYAKEDTV 340
>pdb|1YQP|A Chain A, T268n Mutant Cytochrome Domain Of Flavocytochrome P450 Bm3
pdb|1YQP|B Chain B, T268n Mutant Cytochrome Domain Of Flavocytochrome P450 Bm3
Length = 455
Score = 39.7 bits (91), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 30/119 (25%), Positives = 56/119 (47%), Gaps = 18/119 (15%)
Query: 261 SPDESMHLLSTFLSS--------LQYERQLYIVISFTLADRDTTSAPLTWIFWLLFRNPE 312
S ++S LL+ L+ L E Y +I+F +A + TS L++ + L +NP
Sbjct: 226 SGEQSDDLLTHMLNGKDPETGEPLDDENIRYQIITFLIAGHENTSGLLSFALYFLVKNPH 285
Query: 313 AETPILKEIREKSD------APVFEDIKDMVFTHASLCESMRFYPPVPLDGKLAKKDDV 365
+L++ E++ P ++ +K + + L E++R +P P AK+D V
Sbjct: 286 ----VLQKAAEEAARVLVDPVPSYKQVKQLKYVGMVLNEALRLWPTAPAFSLYAKEDTV 340
>pdb|1FAH|A Chain A, Structure Of Cytochrome P450
pdb|1FAH|B Chain B, Structure Of Cytochrome P450
Length = 471
Score = 39.7 bits (91), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 30/119 (25%), Positives = 56/119 (47%), Gaps = 18/119 (15%)
Query: 261 SPDESMHLLSTFLSS--------LQYERQLYIVISFTLADRDTTSAPLTWIFWLLFRNPE 312
S ++S LL+ L+ L E Y +I+F +A + TS L++ + L +NP
Sbjct: 226 SGEQSDDLLTHMLNGKDPETGEPLDDENIRYQIITFLIAGHEATSGLLSFALYFLVKNPH 285
Query: 313 AETPILKEIREKSD------APVFEDIKDMVFTHASLCESMRFYPPVPLDGKLAKKDDV 365
+L++ E++ P ++ +K + + L E++R +P P AK+D V
Sbjct: 286 ----VLQKAAEEAARVLVDPVPSYKQVKQLKYVGMVLNEALRLWPTAPAFSLYAKEDTV 340
>pdb|1YQO|A Chain A, T268a Mutant Heme Domain Of Flavocytochrome P450 Bm3
pdb|1YQO|B Chain B, T268a Mutant Heme Domain Of Flavocytochrome P450 Bm3
Length = 455
Score = 39.7 bits (91), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 30/119 (25%), Positives = 56/119 (47%), Gaps = 18/119 (15%)
Query: 261 SPDESMHLLSTFLSS--------LQYERQLYIVISFTLADRDTTSAPLTWIFWLLFRNPE 312
S ++S LL+ L+ L E Y +I+F +A + TS L++ + L +NP
Sbjct: 226 SGEQSDDLLTHMLNGKDPETGEPLDDENIRYQIITFLIAGHEATSGLLSFALYFLVKNPH 285
Query: 313 AETPILKEIREKSD------APVFEDIKDMVFTHASLCESMRFYPPVPLDGKLAKKDDV 365
+L++ E++ P ++ +K + + L E++R +P P AK+D V
Sbjct: 286 ----VLQKAAEEAARVLVDPVPSYKQVKQLKYVGMVLNEALRLWPTAPAFSLYAKEDTV 340
>pdb|3DGI|A Chain A, Crystal Structure Of F87aT268A MUTANT OF CYP BM3
pdb|3DGI|B Chain B, Crystal Structure Of F87aT268A MUTANT OF CYP BM3
Length = 461
Score = 39.7 bits (91), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 30/119 (25%), Positives = 56/119 (47%), Gaps = 18/119 (15%)
Query: 261 SPDESMHLLSTFLSS--------LQYERQLYIVISFTLADRDTTSAPLTWIFWLLFRNPE 312
S ++S LL+ L+ L E Y +I+F +A + TS L++ + L +NP
Sbjct: 226 SGEQSDDLLTHMLNGKDPETGEPLDDENIRYQIITFLIAGHEATSGLLSFALYFLVKNPH 285
Query: 313 AETPILKEIREKSD------APVFEDIKDMVFTHASLCESMRFYPPVPLDGKLAKKDDV 365
+L++ E++ P ++ +K + + L E++R +P P AK+D V
Sbjct: 286 ----VLQKAAEEAARVLVDPVPSYKQVKQLKYVGMVLNEALRLWPTAPAFSLYAKEDTV 340
>pdb|2IJ4|A Chain A, Structure Of The A264k Mutant Of Cytochrome P450 Bm3
pdb|2IJ4|B Chain B, Structure Of The A264k Mutant Of Cytochrome P450 Bm3
Length = 470
Score = 39.7 bits (91), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 30/119 (25%), Positives = 56/119 (47%), Gaps = 18/119 (15%)
Query: 261 SPDESMHLLSTFLSS--------LQYERQLYIVISFTLADRDTTSAPLTWIFWLLFRNPE 312
S ++S LL+ L+ L E Y +I+F + +TTS L++ + L +NP
Sbjct: 226 SGEQSDDLLTHMLNGKDPETGEPLDDENIRYQIITFLIKGHETTSGLLSFALYFLVKNPH 285
Query: 313 AETPILKEIREKSD------APVFEDIKDMVFTHASLCESMRFYPPVPLDGKLAKKDDV 365
+L++ E++ P ++ +K + + L E++R +P P AK+D V
Sbjct: 286 ----VLQKAAEEAARVLVDPVPSYKQVKQLKYVGMVLNEALRLWPTAPAFSLYAKEDTV 340
>pdb|1SMI|A Chain A, A Single Mutation Of P450 Bm3 Induces The Conformational
Rearrangement Seen Upon Substrate-Binding In Wild-Type
Enzyme
pdb|1SMI|B Chain B, A Single Mutation Of P450 Bm3 Induces The Conformational
Rearrangement Seen Upon Substrate-Binding In Wild-Type
Enzyme
pdb|1SMJ|A Chain A, Structure Of The A264e Mutant Of Cytochrome P450 Bm3
Complexed With Palmitoleate
pdb|1SMJ|B Chain B, Structure Of The A264e Mutant Of Cytochrome P450 Bm3
Complexed With Palmitoleate
pdb|1SMJ|C Chain C, Structure Of The A264e Mutant Of Cytochrome P450 Bm3
Complexed With Palmitoleate
pdb|1SMJ|D Chain D, Structure Of The A264e Mutant Of Cytochrome P450 Bm3
Complexed With Palmitoleate
Length = 471
Score = 39.7 bits (91), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 30/119 (25%), Positives = 56/119 (47%), Gaps = 18/119 (15%)
Query: 261 SPDESMHLLSTFLSS--------LQYERQLYIVISFTLADRDTTSAPLTWIFWLLFRNPE 312
S ++S LL+ L+ L E Y +I+F + +TTS L++ + L +NP
Sbjct: 226 SGEQSDDLLTHMLNGKDPETGEPLDDENIRYQIITFLIEGHETTSGLLSFALYFLVKNPH 285
Query: 313 AETPILKEIREKSD------APVFEDIKDMVFTHASLCESMRFYPPVPLDGKLAKKDDV 365
+L++ E++ P ++ +K + + L E++R +P P AK+D V
Sbjct: 286 ----VLQKAAEEAARVLVDPVPSYKQVKQLKYVGMVLNEALRLWPTAPAFSLYAKEDTV 340
>pdb|3EKF|A Chain A, Crystal Structure Of The A264q Heme Domain Of Cytochrome
P450 Bm3
pdb|3EKF|B Chain B, Crystal Structure Of The A264q Heme Domain Of Cytochrome
P450 Bm3
Length = 470
Score = 39.7 bits (91), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 30/119 (25%), Positives = 56/119 (47%), Gaps = 18/119 (15%)
Query: 261 SPDESMHLLSTFLSS--------LQYERQLYIVISFTLADRDTTSAPLTWIFWLLFRNPE 312
S ++S LL+ L+ L E Y +I+F + +TTS L++ + L +NP
Sbjct: 226 SGEQSDDLLTHMLNGKDPETGEPLDDENIRYQIITFLIQGHETTSGLLSFALYFLVKNPH 285
Query: 313 AETPILKEIREKSD------APVFEDIKDMVFTHASLCESMRFYPPVPLDGKLAKKDDV 365
+L++ E++ P ++ +K + + L E++R +P P AK+D V
Sbjct: 286 ----VLQKAAEEAARVLVDPVPSYKQVKQLKYVGMVLNEALRLWPTAPAFSLYAKEDTV 340
>pdb|3EKD|A Chain A, Crystal Structure Of The A264m Heme Domain Of Cytochrome
P450 Bm3
pdb|3EKD|B Chain B, Crystal Structure Of The A264m Heme Domain Of Cytochrome
P450 Bm3
Length = 470
Score = 39.7 bits (91), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 30/119 (25%), Positives = 56/119 (47%), Gaps = 18/119 (15%)
Query: 261 SPDESMHLLSTFLSS--------LQYERQLYIVISFTLADRDTTSAPLTWIFWLLFRNPE 312
S ++S LL+ L+ L E Y +I+F + +TTS L++ + L +NP
Sbjct: 226 SGEQSDDLLTHMLNGKDPETGEPLDDENIRYQIITFLIMGHETTSGLLSFALYFLVKNPH 285
Query: 313 AETPILKEIREKSD------APVFEDIKDMVFTHASLCESMRFYPPVPLDGKLAKKDDV 365
+L++ E++ P ++ +K + + L E++R +P P AK+D V
Sbjct: 286 ----VLQKAAEEAARVLVDPVPSYKQVKQLKYVGMVLNEALRLWPTAPAFSLYAKEDTV 340
>pdb|2IJ3|A Chain A, Structure Of The A264h Mutant Of Cytochrome P450 Bm3
pdb|2IJ3|B Chain B, Structure Of The A264h Mutant Of Cytochrome P450 Bm3
Length = 470
Score = 39.3 bits (90), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 30/119 (25%), Positives = 56/119 (47%), Gaps = 18/119 (15%)
Query: 261 SPDESMHLLSTFLSS--------LQYERQLYIVISFTLADRDTTSAPLTWIFWLLFRNPE 312
S ++S LL+ L+ L E Y +I+F + +TTS L++ + L +NP
Sbjct: 226 SGEQSDDLLTHMLNGKDPETGEPLDDENIRYQIITFLIHGHETTSGLLSFALYFLVKNPH 285
Query: 313 AETPILKEIREKSD------APVFEDIKDMVFTHASLCESMRFYPPVPLDGKLAKKDDV 365
+L++ E++ P ++ +K + + L E++R +P P AK+D V
Sbjct: 286 ----VLQKAAEEAARVLVDPVPSYKQVKQLKYVGMVLNEALRLWPTAPAFSLYAKEDTV 340
>pdb|1SUO|A Chain A, Structure Of Mammalian Cytochrome P450 2b4 With Bound
4-(4- Chlorophenyl)imidazole
pdb|2BDM|A Chain A, Structure Of Cytochrome P450 2b4 With Bound Bifonazole
pdb|3G5N|A Chain A, Triple Ligand Occupancy Crystal Structure Of Cytochrome
P450 Complex With The Inhibitor
1-Biphenyl-4-Methyl-1h-Imidazole
pdb|3G5N|B Chain B, Triple Ligand Occupancy Crystal Structure Of Cytochrome
P450 Complex With The Inhibitor
1-Biphenyl-4-Methyl-1h-Imidazole
pdb|3G5N|C Chain C, Triple Ligand Occupancy Crystal Structure Of Cytochrome
P450 Complex With The Inhibitor
1-Biphenyl-4-Methyl-1h-Imidazole
pdb|3G5N|D Chain D, Triple Ligand Occupancy Crystal Structure Of Cytochrome
P450 Complex With The Inhibitor
1-Biphenyl-4-Methyl-1h-Imidazole
pdb|3G93|A Chain A, Single Ligand Occupancy Crystal Structure Of Cytochrome
P450 Complex With The Inhibitor
1-Biphenyl-4-Methyl-1h-Imidazole
pdb|3G93|B Chain B, Single Ligand Occupancy Crystal Structure Of Cytochrome
P450 Complex With The Inhibitor
1-Biphenyl-4-Methyl-1h-Imidazole
pdb|3G93|C Chain C, Single Ligand Occupancy Crystal Structure Of Cytochrome
P450 Complex With The Inhibitor
1-Biphenyl-4-Methyl-1h-Imidazole
pdb|3G93|D Chain D, Single Ligand Occupancy Crystal Structure Of Cytochrome
P450 Complex With The Inhibitor
1-Biphenyl-4-Methyl-1h-Imidazole
pdb|3KW4|A Chain A, Crystal Structure Of Cytochrome 2b4 In Complex With The
Anti-Platelet Drug Ticlopidine
pdb|3ME6|A Chain A, Crystal Structure Of Cytochrome 2b4 In Complex With The
Anti-Platelet Drug Clopidogrel
pdb|3ME6|B Chain B, Crystal Structure Of Cytochrome 2b4 In Complex With The
Anti-Platelet Drug Clopidogrel
pdb|3ME6|C Chain C, Crystal Structure Of Cytochrome 2b4 In Complex With The
Anti-Platelet Drug Clopidogrel
pdb|3ME6|D Chain D, Crystal Structure Of Cytochrome 2b4 In Complex With The
Anti-Platelet Drug Clopidogrel
pdb|3MVR|A Chain A, Crystal Structure Of Cytochrome P450 2b4-H226y In A Closed
Conformation
pdb|3MVR|B Chain B, Crystal Structure Of Cytochrome P450 2b4-H226y In A Closed
Conformation
pdb|3R1A|A Chain A, Closed Crystal Structure Of Cytochrome P450 2b4 Covalently
Bound To The Mechanism-Based Inactivator
Tert-Butylphenylacetylene
pdb|3R1A|B Chain B, Closed Crystal Structure Of Cytochrome P450 2b4 Covalently
Bound To The Mechanism-Based Inactivator
Tert-Butylphenylacetylene
pdb|3R1A|C Chain C, Closed Crystal Structure Of Cytochrome P450 2b4 Covalently
Bound To The Mechanism-Based Inactivator
Tert-Butylphenylacetylene
pdb|3R1A|D Chain D, Closed Crystal Structure Of Cytochrome P450 2b4 Covalently
Bound To The Mechanism-Based Inactivator
Tert-Butylphenylacetylene
pdb|3R1A|E Chain E, Closed Crystal Structure Of Cytochrome P450 2b4 Covalently
Bound To The Mechanism-Based Inactivator
Tert-Butylphenylacetylene
pdb|3R1A|F Chain F, Closed Crystal Structure Of Cytochrome P450 2b4 Covalently
Bound To The Mechanism-Based Inactivator
Tert-Butylphenylacetylene
pdb|3R1A|G Chain G, Closed Crystal Structure Of Cytochrome P450 2b4 Covalently
Bound To The Mechanism-Based Inactivator
Tert-Butylphenylacetylene
pdb|3R1A|H Chain H, Closed Crystal Structure Of Cytochrome P450 2b4 Covalently
Bound To The Mechanism-Based Inactivator
Tert-Butylphenylacetylene
pdb|3R1B|A Chain A, Open Crystal Structure Of Cytochrome P450 2b4 Covalently
Bound To The Mechanism-Based Inactivator
Tert-Butylphenylacetylene
pdb|3R1B|B Chain B, Open Crystal Structure Of Cytochrome P450 2b4 Covalently
Bound To The Mechanism-Based Inactivator
Tert-Butylphenylacetylene
pdb|3R1B|C Chain C, Open Crystal Structure Of Cytochrome P450 2b4 Covalently
Bound To The Mechanism-Based Inactivator
Tert-Butylphenylacetylene
pdb|3R1B|D Chain D, Open Crystal Structure Of Cytochrome P450 2b4 Covalently
Bound To The Mechanism-Based Inactivator
Tert-Butylphenylacetylene
pdb|3TMZ|A Chain A, Crystal Structure Of P450 2b4(H226y) In Complex With
Amlodipine
pdb|3UAS|A Chain A, Cytochrome P450 2b4 Covalently Bound To The
Mechanism-based Inactivator 9-ethynylphenanthrene
Length = 476
Score = 38.9 bits (89), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 29/108 (26%), Positives = 44/108 (40%), Gaps = 3/108 (2%)
Query: 274 SSLQYERQLYIVISFTLADRDTTSAPLTWIFWLLFRNPEAETPILKEIREKSDA---PVF 330
S ++ + V+S A +TTS L + F L+ + P + KEI + + P
Sbjct: 262 SEFHHQNLILTVLSLFFAGTETTSTTLRYGFLLMLKYPHVTERVQKEIEQVIGSHRPPAL 321
Query: 331 EDIKDMVFTHASLCESMRFYPPVPLDGKLAKKDDVWPDGKVIKKETRV 378
+D M +T A + E R +P D G VI K T V
Sbjct: 322 DDRAKMPYTDAVIHEIQRLGDLIPFGVPHTVTKDTQFRGYVIPKNTEV 369
>pdb|1PO5|A Chain A, Structure Of Mammalian Cytochrome P450 2b4
Length = 476
Score = 38.9 bits (89), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 29/108 (26%), Positives = 44/108 (40%), Gaps = 3/108 (2%)
Query: 274 SSLQYERQLYIVISFTLADRDTTSAPLTWIFWLLFRNPEAETPILKEIREKSDA---PVF 330
S ++ + V+S A +TTS L + F L+ + P + KEI + + P
Sbjct: 262 SEFHHQNLILTVLSLFFAGTETTSTTLRYGFLLMLKYPHVTERVQKEIEQVIGSHRPPAL 321
Query: 331 EDIKDMVFTHASLCESMRFYPPVPLDGKLAKKDDVWPDGKVIKKETRV 378
+D M +T A + E R +P D G VI K T V
Sbjct: 322 DDRAKMPYTDAVIHEIQRLGDLIPFGVPHTVTKDTQFRGYVIPKNTEV 369
>pdb|3TK3|A Chain A, Cytochrome P450 2b4 Mutant L437a In Complex With
4-(4-Chlorophenyl) Imidazole
pdb|3TK3|B Chain B, Cytochrome P450 2b4 Mutant L437a In Complex With
4-(4-Chlorophenyl) Imidazole
pdb|3TK3|C Chain C, Cytochrome P450 2b4 Mutant L437a In Complex With
4-(4-Chlorophenyl) Imidazole
pdb|3TK3|D Chain D, Cytochrome P450 2b4 Mutant L437a In Complex With
4-(4-Chlorophenyl) Imidazole
Length = 476
Score = 38.9 bits (89), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 29/108 (26%), Positives = 44/108 (40%), Gaps = 3/108 (2%)
Query: 274 SSLQYERQLYIVISFTLADRDTTSAPLTWIFWLLFRNPEAETPILKEIREKSDA---PVF 330
S ++ + V+S A +TTS L + F L+ + P + KEI + + P
Sbjct: 262 SEFHHQNLILTVLSLFFAGTETTSTTLRYGFLLMLKYPHVTERVQKEIEQVIGSHRPPAL 321
Query: 331 EDIKDMVFTHASLCESMRFYPPVPLDGKLAKKDDVWPDGKVIKKETRV 378
+D M +T A + E R +P D G VI K T V
Sbjct: 322 DDRAKMPYTDAVIHEIQRLGDLIPFGVPHTVTKDTQFRGYVIPKNTEV 369
>pdb|3PM0|A Chain A, Structural Characterization Of The Complex Between Alpha-
Naphthoflavone And Human Cytochrome P450 1b1 (Cyp1b1)
Length = 507
Score = 38.5 bits (88), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 28/105 (26%), Positives = 49/105 (46%), Gaps = 3/105 (2%)
Query: 291 ADRDTTSAPLTWIFWLLFRNPEAETPI---LKEIREKSDAPVFEDIKDMVFTHASLCESM 347
A +DT S L W+ L R P+ +T + L ++ + P D ++ + A L E+M
Sbjct: 290 ASQDTLSTALQWLLLLFTRYPDVQTRVQAELDQVVGRDRLPCMGDQPNLPYVLAFLYEAM 349
Query: 348 RFYPPVPLDGKLAKKDDVWPDGKVIKKETRVTYHSYAMGRTEIKF 392
RF VP+ A + G I K+T V + +++ +K+
Sbjct: 350 RFSSFVPVTIPHATTANTSVLGYHIPKDTVVFVNQWSVNHDPLKW 394
>pdb|2Q6N|A Chain A, Structure Of Cytochrome P450 2b4 With Bound 1-(4-
Cholorophenyl)imidazole
pdb|2Q6N|B Chain B, Structure Of Cytochrome P450 2b4 With Bound 1-(4-
Cholorophenyl)imidazole
pdb|2Q6N|C Chain C, Structure Of Cytochrome P450 2b4 With Bound 1-(4-
Cholorophenyl)imidazole
pdb|2Q6N|D Chain D, Structure Of Cytochrome P450 2b4 With Bound 1-(4-
Cholorophenyl)imidazole
pdb|2Q6N|E Chain E, Structure Of Cytochrome P450 2b4 With Bound 1-(4-
Cholorophenyl)imidazole
pdb|2Q6N|F Chain F, Structure Of Cytochrome P450 2b4 With Bound 1-(4-
Cholorophenyl)imidazole
pdb|2Q6N|G Chain G, Structure Of Cytochrome P450 2b4 With Bound 1-(4-
Cholorophenyl)imidazole
Length = 478
Score = 38.5 bits (88), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 29/108 (26%), Positives = 44/108 (40%), Gaps = 3/108 (2%)
Query: 274 SSLQYERQLYIVISFTLADRDTTSAPLTWIFWLLFRNPEAETPILKEIREKSDA---PVF 330
S ++ + V+S A +TTS L + F L+ + P + KEI + + P
Sbjct: 262 SEFHHQNLILTVLSLFFAGTETTSTTLRYGFLLMLKYPHVTERVQKEIEQVIGSHRPPAL 321
Query: 331 EDIKDMVFTHASLCESMRFYPPVPLDGKLAKKDDVWPDGKVIKKETRV 378
+D M +T A + E R +P D G VI K T V
Sbjct: 322 DDRAKMPYTDAVIHEIQRLGDLIPFGVPHTVTKDTQFRGYVIPKNTEV 369
>pdb|3KX5|A Chain A, Crystal Structure Of Bacillus Megaterium Bm3 Heme Domain
Mut
pdb|3KX5|B Chain B, Crystal Structure Of Bacillus Megaterium Bm3 Heme Domain
Mut
Length = 470
Score = 38.1 bits (87), Expect = 0.009, Method: Compositional matrix adjust.
Identities = 30/119 (25%), Positives = 56/119 (47%), Gaps = 18/119 (15%)
Query: 261 SPDESMHLLSTFLSS--------LQYERQLYIVISFTLADRDTTSAPLTWIFWLLFRNPE 312
S ++S LL+ L+ L E Y +I+ +A +TTS L++ + L +NP
Sbjct: 226 SGEQSDDLLTHMLNGKDPETGEPLDDENIRYQIITELIAGHETTSGLLSFALYFLVKNPH 285
Query: 313 AETPILKEIREKSD------APVFEDIKDMVFTHASLCESMRFYPPVPLDGKLAKKDDV 365
+L++ E++ P ++ +K + + L E++R +P P AK+D V
Sbjct: 286 ----VLQKAAEEAARVLVDPVPSYKQVKQLKYVGMVLNEALRLWPTAPAFSLYAKEDTV 340
>pdb|4DTW|B Chain B, Cytochrome P450 Bm3h-8c8 Mri Sensor Bound To Serotonin
pdb|4DTW|A Chain A, Cytochrome P450 Bm3h-8c8 Mri Sensor Bound To Serotonin
pdb|4DTY|B Chain B, Cytochrome P450 Bm3h-8c8 Mri Sensor, No Ligand
pdb|4DTY|A Chain A, Cytochrome P450 Bm3h-8c8 Mri Sensor, No Ligand
pdb|4DTZ|A Chain A, Cytochrome P450 Bm3h-8c8 Mri Sensor Bound To Dopamine
pdb|4DTZ|B Chain B, Cytochrome P450 Bm3h-8c8 Mri Sensor Bound To Dopamine
Length = 469
Score = 38.1 bits (87), Expect = 0.009, Method: Compositional matrix adjust.
Identities = 31/115 (26%), Positives = 53/115 (46%), Gaps = 10/115 (8%)
Query: 261 SPDESMHLLSTFLSS--------LQYERQLYIVISFTLADRDTTSAPLTWIFWLLFRNP- 311
S ++S LL+ L+ L E Y +I+F A + TS L++ + L +NP
Sbjct: 226 SGEQSDDLLTHMLNGKDPETGEPLDDENIRYQIITFLAAGHEATSGLLSFALYFLVKNPH 285
Query: 312 EAETPILKEIREKSD-APVFEDIKDMVFTHASLCESMRFYPPVPLDGKLAKKDDV 365
E + + R D P ++ +K + + L E++R +P P AK+D V
Sbjct: 286 ELQKAAEEAARVLVDPVPSYKQVKQLKYVGMVLNEALRLWPTAPAFSLYAKEDTV 340
>pdb|4H1N|A Chain A, Crystal Structure Of P450 2b4 F297a Mutant In Complex With
Anti- Platelet Drug Clopidogrel
Length = 479
Score = 38.1 bits (87), Expect = 0.010, Method: Compositional matrix adjust.
Identities = 29/108 (26%), Positives = 44/108 (40%), Gaps = 3/108 (2%)
Query: 274 SSLQYERQLYIVISFTLADRDTTSAPLTWIFWLLFRNPEAETPILKEIREKSDA---PVF 330
S ++ + V+S A +TTS L + F L+ + P + KEI + + P
Sbjct: 262 SEFHHQNLILTVLSLFAAGTETTSTTLRYGFLLMLKYPHVTERVQKEIEQVIGSHRPPAL 321
Query: 331 EDIKDMVFTHASLCESMRFYPPVPLDGKLAKKDDVWPDGKVIKKETRV 378
+D M +T A + E R +P D G VI K T V
Sbjct: 322 DDRAKMPYTDAVIHEIQRLGDLIPFGVPHTVTKDTQFRGYVIPKNTEV 369
>pdb|4DUB|A Chain A, Cytochrome P450 Bm3h-9d7 Mri Sensor Bound To Dopamine
pdb|4DUB|B Chain B, Cytochrome P450 Bm3h-9d7 Mri Sensor Bound To Dopamine
Length = 472
Score = 37.4 bits (85), Expect = 0.013, Method: Compositional matrix adjust.
Identities = 30/119 (25%), Positives = 55/119 (46%), Gaps = 18/119 (15%)
Query: 261 SPDESMHLLSTFLSS--------LQYERQLYIVISFTLADRDTTSAPLTWIFWLLFRNPE 312
S ++S LL+ L+ L E Y +I+F A + TS L++ + L +NP
Sbjct: 227 SGEQSDDLLTHMLNGKDPETGEPLDDENIRYQIITFLAAGHEATSGLLSFALYFLVKNPH 286
Query: 313 AETPILKEIREKSD------APVFEDIKDMVFTHASLCESMRFYPPVPLDGKLAKKDDV 365
+L++ E++ P ++ +K + + L E++R +P P AK+D V
Sbjct: 287 ----VLQKAAEEAARVLVDPVPSYKQVKQLKYVGMVLNEALRLWPTGPAFSLYAKEDTV 341
>pdb|4DUA|A Chain A, Cytochrome P450 Bm3h-9d7 Mri Sensor, No Ligand
pdb|4DUA|B Chain B, Cytochrome P450 Bm3h-9d7 Mri Sensor, No Ligand
Length = 471
Score = 37.4 bits (85), Expect = 0.013, Method: Compositional matrix adjust.
Identities = 30/119 (25%), Positives = 55/119 (46%), Gaps = 18/119 (15%)
Query: 261 SPDESMHLLSTFLSS--------LQYERQLYIVISFTLADRDTTSAPLTWIFWLLFRNPE 312
S ++S LL+ L+ L E Y +I+F A + TS L++ + L +NP
Sbjct: 226 SGEQSDDLLTHMLNGKDPETGEPLDDENIRYQIITFLAAGHEATSGLLSFALYFLVKNPH 285
Query: 313 AETPILKEIREKSD------APVFEDIKDMVFTHASLCESMRFYPPVPLDGKLAKKDDV 365
+L++ E++ P ++ +K + + L E++R +P P AK+D V
Sbjct: 286 ----VLQKAAEEAARVLVDPVPSYKQVKQLKYVGMVLNEALRLWPTGPAFSLYAKEDTV 340
>pdb|4DU2|B Chain B, Cytochrome P450 Bm3h-B7 Mri Sensor Bound To Dopamine
pdb|4DU2|A Chain A, Cytochrome P450 Bm3h-B7 Mri Sensor Bound To Dopamine
Length = 470
Score = 36.2 bits (82), Expect = 0.029, Method: Compositional matrix adjust.
Identities = 31/115 (26%), Positives = 52/115 (45%), Gaps = 10/115 (8%)
Query: 261 SPDESMHLLSTFLSS--------LQYERQLYIVISFTLADRDTTSAPLTWIFWLLFRNP- 311
S ++S LL+ L+ L E Y +I+F A + TS L++ + L +NP
Sbjct: 227 SGEQSDDLLTHMLNGKDPETGEPLDDENIRYQIITFLAAGHEATSGLLSFALYFLVKNPH 286
Query: 312 EAETPILKEIREKSD-APVFEDIKDMVFTHASLCESMRFYPPVPLDGKLAKKDDV 365
E + + R D P + +K + + L E++R +P P AK+D V
Sbjct: 287 ELQKAAEEAARVLVDPVPSHKQVKQLKYVGMVLNEALRLWPTAPAFSLYAKEDTV 341
>pdb|3E4E|A Chain A, Human Cytochrome P450 2e1 In Complex With The Inhibitor 4-
Methylpyrazole
pdb|3E4E|B Chain B, Human Cytochrome P450 2e1 In Complex With The Inhibitor 4-
Methylpyrazole
pdb|3E6I|A Chain A, Human Cytochrome P450 2e1 In Complex With The Inhibitor
Indazole
pdb|3E6I|B Chain B, Human Cytochrome P450 2e1 In Complex With The Inhibitor
Indazole
pdb|3GPH|A Chain A, Human Cytochrome P450 2e1 In Complex With
Omega-Imidazolyl-Decanoic Acid
pdb|3GPH|B Chain B, Human Cytochrome P450 2e1 In Complex With
Omega-Imidazolyl-Decanoic Acid
pdb|3KOH|A Chain A, Cytochrome P450 2e1 With Omega-Imidazolyl Octanoic Acid
pdb|3KOH|B Chain B, Cytochrome P450 2e1 With Omega-Imidazolyl Octanoic Acid
pdb|3LC4|A Chain A, Human Cytochrome P450 2e1 In Complex With
Omega-Imidazolyl-Dodecanoic Acid
pdb|3LC4|B Chain B, Human Cytochrome P450 2e1 In Complex With
Omega-Imidazolyl-Dodecanoic Acid
pdb|3T3Z|A Chain A, Human Cytochrome P450 2e1 In Complex With Pilocarpine
pdb|3T3Z|B Chain B, Human Cytochrome P450 2e1 In Complex With Pilocarpine
pdb|3T3Z|C Chain C, Human Cytochrome P450 2e1 In Complex With Pilocarpine
pdb|3T3Z|D Chain D, Human Cytochrome P450 2e1 In Complex With Pilocarpine
Length = 476
Score = 34.7 bits (78), Expect = 0.10, Method: Compositional matrix adjust.
Identities = 39/161 (24%), Positives = 64/161 (39%), Gaps = 10/161 (6%)
Query: 229 GSQKRLQVAICQVREFAXXXXXXXXXXXXXXXSPDESMHLLSTFLSSLQYERQLYIV--I 286
GS +++ + +V+E+ D + LL +LY + I
Sbjct: 209 GSHRKVIKNVAEVKEYVSERVKEHHQSLDPNCPRDLTDCLLVEMEKEKHSAERLYTMDGI 268
Query: 287 SFTLAD-----RDTTSAPLTWIFWLLFRNPEAETPILKEIRE---KSDAPVFEDIKDMVF 338
+ T+AD +TTS L + +L + PE E + +EI S P +D ++M +
Sbjct: 269 TVTVADLFFAGTETTSTTLRYGLLILMKYPEIEEKLHEEIDRVIGPSRIPAIKDRQEMPY 328
Query: 339 THASLCESMRFYPPVPLDGKLAKKDDVWPDGKVIKKETRVT 379
A + E RF VP + D G +I K T V
Sbjct: 329 MDAVVHEIQRFITLVPSNLPHEATRDTIFRGYLIPKGTVVV 369
>pdb|3RUK|A Chain A, Human Cytochrome P450 Cyp17a1 In Complex With Abiraterone
pdb|3RUK|B Chain B, Human Cytochrome P450 Cyp17a1 In Complex With Abiraterone
pdb|3RUK|C Chain C, Human Cytochrome P450 Cyp17a1 In Complex With Abiraterone
pdb|3RUK|D Chain D, Human Cytochrome P450 Cyp17a1 In Complex With Abiraterone
pdb|3SWZ|A Chain A, Human Cytochrome P450 17a1 In Complex With Tok-001
pdb|3SWZ|B Chain B, Human Cytochrome P450 17a1 In Complex With Tok-001
pdb|3SWZ|C Chain C, Human Cytochrome P450 17a1 In Complex With Tok-001
pdb|3SWZ|D Chain D, Human Cytochrome P450 17a1 In Complex With Tok-001
Length = 494
Score = 34.7 bits (78), Expect = 0.11, Method: Compositional matrix adjust.
Identities = 17/68 (25%), Positives = 32/68 (47%), Gaps = 3/68 (4%)
Query: 291 ADRDTTSAPLTWIFWLLFRNPEAETPILKEIREK---SDAPVFEDIKDMVFTHASLCESM 347
A +TT++ + W L NP+ + + +EI + S P D ++ A++ E +
Sbjct: 284 AGVETTTSVVKWTLAFLLHNPQVKKKLYEEIDQNVGFSRTPTISDRNRLLLLEATIREVL 343
Query: 348 RFYPPVPL 355
R P P+
Sbjct: 344 RLRPVAPM 351
>pdb|3IBD|A Chain A, Crystal Structure Of A Cytochrome P450 2b6 Genetic Variant
In Complex With The Inhibitor
4-(4-Chlorophenyl)imidazole
pdb|3QOA|A Chain A, Crystal Structure Of A Human Cytochrome P450 2b6
(Y226hK262R) IN Complex With The Inhibitor
4-Benzylpyridine.
pdb|3QU8|A Chain A, Crystal Structure Of A Human Cytochrome P450 2b6
(Y226hK262R) IN Complex With The Inhibitor
4-(4-Nitrobenzyl)pyridine.
pdb|3QU8|B Chain B, Crystal Structure Of A Human Cytochrome P450 2b6
(Y226hK262R) IN Complex With The Inhibitor
4-(4-Nitrobenzyl)pyridine.
pdb|3QU8|C Chain C, Crystal Structure Of A Human Cytochrome P450 2b6
(Y226hK262R) IN Complex With The Inhibitor
4-(4-Nitrobenzyl)pyridine.
pdb|3QU8|D Chain D, Crystal Structure Of A Human Cytochrome P450 2b6
(Y226hK262R) IN Complex With The Inhibitor
4-(4-Nitrobenzyl)pyridine.
pdb|3QU8|E Chain E, Crystal Structure Of A Human Cytochrome P450 2b6
(Y226hK262R) IN Complex With The Inhibitor
4-(4-Nitrobenzyl)pyridine.
pdb|3QU8|F Chain F, Crystal Structure Of A Human Cytochrome P450 2b6
(Y226hK262R) IN Complex With The Inhibitor
4-(4-Nitrobenzyl)pyridine.
pdb|3UA5|A Chain A, Crystal Structure Of P450 2b6 (Y226hK262R) IN COMPLEX WITH
TWO Molecules Of Amlodipine
pdb|3UA5|B Chain B, Crystal Structure Of P450 2b6 (Y226hK262R) IN COMPLEX WITH
TWO Molecules Of Amlodipine
Length = 476
Score = 34.7 bits (78), Expect = 0.11, Method: Compositional matrix adjust.
Identities = 62/300 (20%), Positives = 111/300 (37%), Gaps = 47/300 (15%)
Query: 105 GDGIFNSDGDKWKFQRQVSSHEFNTKSLRKF------VETVVETELSDRLIHILSAAAAD 158
G G+ ++G++WK R+ F+ ++R F VE ++ E + LI L +
Sbjct: 91 GYGVIFANGNRWKVLRR-----FSVTTMRDFGMGKRSVEERIQEE-AQCLIEELRKSKG- 143
Query: 159 KTVLDLQDMLQRFAFVNICKTAFGYDPEYLSPSLPQAEFAKAFDDAVQTSAERFREPLRI 218
++D + Q IC FG Y EF K + QT F +
Sbjct: 144 -ALMDPTFLFQSITANIICSIVFGKRFHY-----QDQEFLKMLNLFYQT----FSLISSV 193
Query: 219 FWKIQRLLNI------GSQKRLQVAICQVREFAXXXXXXXXXXXXXXXSPDESMHLLSTF 272
F ++ L + G+ +++ + ++ + P L+ T+
Sbjct: 194 FGQLFELFSGFLKHFPGAHRQVYKNLQEINAYIGHSVEKHRETL----DPSAPRDLIDTY 249
Query: 273 LSSLQYER----------QLYI-VISFTLADRDTTSAPLTWIFWLLFRNPEAETPILKEI 321
L ++ E+ L + +S A +TTS L + F L+ + P + +EI
Sbjct: 250 LLHMEKEKSNAHSEFSHQNLNLNTLSLFFAGTETTSTTLRYGFLLMLKYPHVAERVYREI 309
Query: 322 RE---KSDAPVFEDIKDMVFTHASLCESMRFYPPVPLDGKLAKKDDVWPDGKVIKKETRV 378
+ P D M +T A + E RF +P+ G +I K+T V
Sbjct: 310 EQVIGPHRPPELHDRAKMPYTEAVIYEIQRFSDLLPMGVPHIVTQHTSFRGYIIPKDTEV 369
>pdb|2F9Q|A Chain A, Crystal Structure Of Human Cytochrome P450 2d6
pdb|2F9Q|B Chain B, Crystal Structure Of Human Cytochrome P450 2d6
pdb|2F9Q|C Chain C, Crystal Structure Of Human Cytochrome P450 2d6
pdb|2F9Q|D Chain D, Crystal Structure Of Human Cytochrome P450 2d6
Length = 479
Score = 33.1 bits (74), Expect = 0.25, Method: Compositional matrix adjust.
Identities = 30/106 (28%), Positives = 42/106 (39%), Gaps = 3/106 (2%)
Query: 274 SSLQYERQLYIVISFTLADRDTTSAPLTWIFWLLFRNPEAETPILKEIRE---KSDAPVF 330
SS E +V A TTS L W L+ +P+ + + +EI + + P
Sbjct: 266 SSFNDENLRIVVADLFSAGMVTTSTTLAWGLLLMILHPDVQRRVQQEIDDVIGQVRRPEM 325
Query: 331 EDIKDMVFTHASLCESMRFYPPVPLDGKLAKKDDVWPDGKVIKKET 376
D M +T A + E RF VPL D+ G I K T
Sbjct: 326 GDQAHMPYTTAVIHEVQRFGDIVPLGMTHMTSRDIEVQGFRIPKGT 371
>pdb|3QM4|A Chain A, Human Cytochrome P450 (Cyp) 2d6 - Prinomastat Complex
pdb|3QM4|B Chain B, Human Cytochrome P450 (Cyp) 2d6 - Prinomastat Complex
pdb|3TBG|A Chain A, Human Cytochrome P450 2d6 With Two Thioridazines Bound In
Active Site
pdb|3TBG|B Chain B, Human Cytochrome P450 2d6 With Two Thioridazines Bound In
Active Site
pdb|3TBG|C Chain C, Human Cytochrome P450 2d6 With Two Thioridazines Bound In
Active Site
pdb|3TBG|D Chain D, Human Cytochrome P450 2d6 With Two Thioridazines Bound In
Active Site
pdb|3TDA|A Chain A, Competitive Replacement Of Thioridazine By Prinomastat In
Crystals Of Cytochrome P450 2d6
pdb|3TDA|B Chain B, Competitive Replacement Of Thioridazine By Prinomastat In
Crystals Of Cytochrome P450 2d6
pdb|3TDA|C Chain C, Competitive Replacement Of Thioridazine By Prinomastat In
Crystals Of Cytochrome P450 2d6
pdb|3TDA|D Chain D, Competitive Replacement Of Thioridazine By Prinomastat In
Crystals Of Cytochrome P450 2d6
Length = 479
Score = 33.1 bits (74), Expect = 0.26, Method: Compositional matrix adjust.
Identities = 30/106 (28%), Positives = 42/106 (39%), Gaps = 3/106 (2%)
Query: 274 SSLQYERQLYIVISFTLADRDTTSAPLTWIFWLLFRNPEAETPILKEIRE---KSDAPVF 330
SS E +V A TTS L W L+ +P+ + + +EI + + P
Sbjct: 266 SSFNDENLRIVVADLFSAGMVTTSTTLAWGLLLMILHPDVQRRVQQEIDDVIGQVRRPEM 325
Query: 331 EDIKDMVFTHASLCESMRFYPPVPLDGKLAKKDDVWPDGKVIKKET 376
D M +T A + E RF VPL D+ G I K T
Sbjct: 326 GDQAHMPYTTAVIHEVQRFGDIVPLGVTHMTSRDIEVQGFRIPKGT 371
>pdb|2OZO|A Chain A, Autoinhibited Intact Human Zap-70
Length = 613
Score = 32.7 bits (73), Expect = 0.39, Method: Compositional matrix adjust.
Identities = 20/82 (24%), Positives = 40/82 (48%), Gaps = 5/82 (6%)
Query: 68 VQFVTANPDNFPAHAQKTQFHNYPKGIDFQPILFDLLGDGIF-NSDGDKWKFQRQVSSHE 126
+F + +PD P + +K N P G++ QP +FD L D + + WK + +
Sbjct: 84 CEFYSRDPDGLPCNLRKPC--NRPSGLEPQPGVFDCLRDAMVRDYVRQTWKLEGEALEQA 141
Query: 127 FNTKSLRKFVETVVETELSDRL 148
+++ + VE ++ T +R+
Sbjct: 142 IISQAPQ--VEKLIATTAHERM 161
>pdb|1M61|A Chain A, Crystal Structure Of The Apo Sh2 Domains Of Zap-70
Length = 259
Score = 32.3 bits (72), Expect = 0.46, Method: Compositional matrix adjust.
Identities = 20/82 (24%), Positives = 40/82 (48%), Gaps = 5/82 (6%)
Query: 68 VQFVTANPDNFPAHAQKTQFHNYPKGIDFQPILFDLLGDGIF-NSDGDKWKFQRQVSSHE 126
+F + +PD P + +K N P G++ QP +FD L D + + WK + +
Sbjct: 87 CEFYSRDPDGLPCNLRKPC--NRPSGLEPQPGVFDCLRDAMVRDYVRQTWKLEGEALEQA 144
Query: 127 FNTKSLRKFVETVVETELSDRL 148
+++ + VE ++ T +R+
Sbjct: 145 IISQAPQ--VEKLIATTAHERM 164
>pdb|3DBG|A Chain A, Crystal Structure Of Cytochrome P450 170a1 (Cyp170a1) From
Streptomyces Coelicolor
pdb|3DBG|B Chain B, Crystal Structure Of Cytochrome P450 170a1 (Cyp170a1) From
Streptomyces Coelicolor
pdb|3EL3|A Chain A, Distinct Monooxygenase And Farnesene Synthase Active Sites
In Cytochrome P450 170a1
pdb|3EL3|B Chain B, Distinct Monooxygenase And Farnesene Synthase Active Sites
In Cytochrome P450 170a1
Length = 467
Score = 32.0 bits (71), Expect = 0.57, Method: Compositional matrix adjust.
Identities = 19/71 (26%), Positives = 34/71 (47%), Gaps = 2/71 (2%)
Query: 285 VISFTLADRDTTSAPLTWIFWLLFRNPEAETPILKEIREKSDA-PV-FEDIKDMVFTHAS 342
V++ +T ++ + W+ L +PE I E+ + PV FED++ + T
Sbjct: 268 VVAILTPGSETIASTIMWLLQALADHPEHADRIRDEVEAVTGGRPVAFEDVRKLRHTGNV 327
Query: 343 LCESMRFYPPV 353
+ E+MR P V
Sbjct: 328 IVEAMRLRPAV 338
>pdb|4DVQ|A Chain A, Structure Of Human Aldosterone Synthase, Cyp11b2, In
Complex With Deoxycorticosterone
pdb|4DVQ|B Chain B, Structure Of Human Aldosterone Synthase, Cyp11b2, In
Complex With Deoxycorticosterone
pdb|4DVQ|C Chain C, Structure Of Human Aldosterone Synthase, Cyp11b2, In
Complex With Deoxycorticosterone
pdb|4DVQ|D Chain D, Structure Of Human Aldosterone Synthase, Cyp11b2, In
Complex With Deoxycorticosterone
pdb|4DVQ|E Chain E, Structure Of Human Aldosterone Synthase, Cyp11b2, In
Complex With Deoxycorticosterone
pdb|4DVQ|F Chain F, Structure Of Human Aldosterone Synthase, Cyp11b2, In
Complex With Deoxycorticosterone
pdb|4DVQ|G Chain G, Structure Of Human Aldosterone Synthase, Cyp11b2, In
Complex With Deoxycorticosterone
pdb|4DVQ|H Chain H, Structure Of Human Aldosterone Synthase, Cyp11b2, In
Complex With Deoxycorticosterone
pdb|4DVQ|I Chain I, Structure Of Human Aldosterone Synthase, Cyp11b2, In
Complex With Deoxycorticosterone
pdb|4DVQ|J Chain J, Structure Of Human Aldosterone Synthase, Cyp11b2, In
Complex With Deoxycorticosterone
pdb|4DVQ|K Chain K, Structure Of Human Aldosterone Synthase, Cyp11b2, In
Complex With Deoxycorticosterone
pdb|4DVQ|L Chain L, Structure Of Human Aldosterone Synthase, Cyp11b2, In
Complex With Deoxycorticosterone
pdb|4FDH|A Chain A, Structure Of Human Aldosterone Synthase, Cyp11b2, In
Complex With Fadrozole
pdb|4FDH|B Chain B, Structure Of Human Aldosterone Synthase, Cyp11b2, In
Complex With Fadrozole
pdb|4FDH|C Chain C, Structure Of Human Aldosterone Synthase, Cyp11b2, In
Complex With Fadrozole
pdb|4FDH|D Chain D, Structure Of Human Aldosterone Synthase, Cyp11b2, In
Complex With Fadrozole
pdb|4FDH|E Chain E, Structure Of Human Aldosterone Synthase, Cyp11b2, In
Complex With Fadrozole
pdb|4FDH|F Chain F, Structure Of Human Aldosterone Synthase, Cyp11b2, In
Complex With Fadrozole
pdb|4FDH|G Chain G, Structure Of Human Aldosterone Synthase, Cyp11b2, In
Complex With Fadrozole
pdb|4FDH|H Chain H, Structure Of Human Aldosterone Synthase, Cyp11b2, In
Complex With Fadrozole
pdb|4FDH|I Chain I, Structure Of Human Aldosterone Synthase, Cyp11b2, In
Complex With Fadrozole
pdb|4FDH|J Chain J, Structure Of Human Aldosterone Synthase, Cyp11b2, In
Complex With Fadrozole
pdb|4FDH|K Chain K, Structure Of Human Aldosterone Synthase, Cyp11b2, In
Complex With Fadrozole
pdb|4FDH|L Chain L, Structure Of Human Aldosterone Synthase, Cyp11b2, In
Complex With Fadrozole
Length = 483
Score = 32.0 bits (71), Expect = 0.62, Method: Compositional matrix adjust.
Identities = 30/111 (27%), Positives = 48/111 (43%), Gaps = 6/111 (5%)
Query: 286 ISFTLADRDTTSAPLTWIFWLLFRNPEAETPILKEIREKSDAPVFED----IKDMVFTHA 341
+ T DTT+ PL + L RNP+ + IL++ + A + E ++ A
Sbjct: 283 MELTAGSVDTTAFPLLMTLFELARNPDVQQ-ILRQESLAAAASISEHPQKATTELPLLRA 341
Query: 342 SLCESMRFYPPVPLDGKLAKKDDVWPDGKVIKKETRVTYHSYAMGRTEIKF 392
+L E++R Y PV L + D+ I T V Y++GR F
Sbjct: 342 ALKETLRLY-PVGLFLERVVSSDLVLQNYHIPAGTLVQVFLYSLGRNAALF 391
>pdb|3QZ1|A Chain A, Crystal Structure Of Bovine Steroid Of 21-Hydroxylase
(P450c21)
pdb|3QZ1|B Chain B, Crystal Structure Of Bovine Steroid Of 21-Hydroxylase
(P450c21)
pdb|3QZ1|C Chain C, Crystal Structure Of Bovine Steroid Of 21-Hydroxylase
(P450c21)
pdb|3QZ1|D Chain D, Crystal Structure Of Bovine Steroid Of 21-Hydroxylase
(P450c21)
Length = 496
Score = 31.2 bits (69), Expect = 0.99, Method: Compositional matrix adjust.
Identities = 19/77 (24%), Positives = 37/77 (48%), Gaps = 6/77 (7%)
Query: 285 VISFTLADRDTTSAPLTWIFWLLFRNPEAETPILKEI-REKSDAP-----VFEDIKDMVF 338
V+ + +TT++ L+W L +PE + + +E+ RE ++D +
Sbjct: 284 VVDLFIGGTETTASTLSWAVAFLLHHPEIQRRLQEELDRELGPGASCSRVTYKDRARLPL 343
Query: 339 THASLCESMRFYPPVPL 355
+A++ E +R P VPL
Sbjct: 344 LNATIAEVLRLRPVVPL 360
>pdb|2OQ1|A Chain A, Tandem Sh2 Domains Of Zap-70 With 19-Mer Zeta1 Peptide
Length = 254
Score = 31.2 bits (69), Expect = 1.1, Method: Compositional matrix adjust.
Identities = 20/81 (24%), Positives = 39/81 (48%), Gaps = 5/81 (6%)
Query: 68 VQFVTANPDNFPAHAQKTQFHNYPKGIDFQPILFDLLGDG-IFNSDGDKWKFQRQVSSHE 126
+F + +PD P + +K N P G++ QP +FD L D + + WK + +
Sbjct: 82 CEFYSRDPDGLPCNLRKPC--NRPSGLEPQPGVFDCLRDAXVRDYVRQTWKLEGEALEQA 139
Query: 127 FNTKSLRKFVETVVETELSDR 147
+++ + VE ++ T +R
Sbjct: 140 IISQAPQ--VEKLIATTAHER 158
>pdb|3N9Y|A Chain A, Crystal Structure Of Human Cyp11a1 In Complex With
Cholesterol
pdb|3N9Y|B Chain B, Crystal Structure Of Human Cyp11a1 In Complex With
Cholesterol
pdb|3N9Z|A Chain A, Crystal Structure Of Human Cyp11a1 In Complex With 22-
Hydroxycholesterol
pdb|3N9Z|B Chain B, Crystal Structure Of Human Cyp11a1 In Complex With 22-
Hydroxycholesterol
pdb|3NA1|A Chain A, Crystal Structure Of Human Cyp11a1 In Complex With 20-
Hydroxycholesterol
pdb|3NA1|B Chain B, Crystal Structure Of Human Cyp11a1 In Complex With 20-
Hydroxycholesterol
Length = 487
Score = 29.6 bits (65), Expect = 3.2, Method: Compositional matrix adjust.
Identities = 27/104 (25%), Positives = 49/104 (47%), Gaps = 6/104 (5%)
Query: 294 DTTSAPLTWIFWLLFRNPEAETPILKEI---REKSDAPVFEDIKDMVFTHASLCESMRFY 350
DTTS L W + + RN + + + E+ R ++ + ++ + AS+ E++R +
Sbjct: 289 DTTSMTLQWHLYEMARNLKVQDMLRAEVLAARHQAQGDMATMLQLVPLLKASIKETLRLH 348
Query: 351 P-PVPLDGKLAKKDDVWPDGKVIKKETRVTYHSYAMGRTEIKFY 393
P V L L +D+ +I +T V YA+GR F+
Sbjct: 349 PISVTLQRYLV--NDLVLRDYMIPAKTLVQVAIYALGREPTFFF 390
>pdb|4I8V|A Chain A, Human Cytochrome P450 1a1 In Complex With
Alpha-naphthoflavone
pdb|4I8V|B Chain B, Human Cytochrome P450 1a1 In Complex With
Alpha-naphthoflavone
pdb|4I8V|C Chain C, Human Cytochrome P450 1a1 In Complex With
Alpha-naphthoflavone
pdb|4I8V|D Chain D, Human Cytochrome P450 1a1 In Complex With
Alpha-naphthoflavone
Length = 491
Score = 29.6 bits (65), Expect = 3.3, Method: Compositional matrix adjust.
Identities = 21/82 (25%), Positives = 35/82 (42%), Gaps = 3/82 (3%)
Query: 276 LQYERQLYIVISFTLADRDTTSAPLTWIFWLLFRNPEAETPILKE---IREKSDAPVFED 332
L E+ + IV+ A DT + ++W L NP + I +E + +S P D
Sbjct: 275 LSDEKIINIVLDLFGAGFDTVTTAISWSLMYLVMNPRVQRKIQEELDTVIGRSRRPRLSD 334
Query: 333 IKDMVFTHASLCESMRFYPPVP 354
+ + A + E+ R VP
Sbjct: 335 RSHLPYMEAFILETFRHSSFVP 356
>pdb|3NA0|A Chain A, Crystal Structure Of Human Cyp11a1 In Complex With 20,22-
Dihydroxycholesterol
pdb|3NA0|B Chain B, Crystal Structure Of Human Cyp11a1 In Complex With 20,22-
Dihydroxycholesterol
Length = 471
Score = 29.6 bits (65), Expect = 3.5, Method: Compositional matrix adjust.
Identities = 27/104 (25%), Positives = 49/104 (47%), Gaps = 6/104 (5%)
Query: 294 DTTSAPLTWIFWLLFRNPEAETPILKEI---REKSDAPVFEDIKDMVFTHASLCESMRFY 350
DTTS L W + + RN + + + E+ R ++ + ++ + AS+ E++R +
Sbjct: 286 DTTSMTLQWHLYEMARNLKVQDMLRAEVLAARHQAQGDMATMLQLVPLLKASIKETLRLH 345
Query: 351 P-PVPLDGKLAKKDDVWPDGKVIKKETRVTYHSYAMGRTEIKFY 393
P V L L +D+ +I +T V YA+GR F+
Sbjct: 346 PISVTLQRYLV--NDLVLRDYMIPAKTLVQVAIYALGREPTFFF 387
>pdb|3LD6|A Chain A, Crystal Structure Of Human Lanosterol 14alpha-Demethylase
(C Complex With Ketoconazole
pdb|3LD6|B Chain B, Crystal Structure Of Human Lanosterol 14alpha-Demethylase
(C Complex With Ketoconazole
pdb|3JUS|A Chain A, Crystal Structure Of Human Lanosterol 14alpha-Demethylase
(Cyp51) In Complex With Econazole
pdb|3JUS|B Chain B, Crystal Structure Of Human Lanosterol 14alpha-Demethylase
(Cyp51) In Complex With Econazole
pdb|3JUV|A Chain A, Crystal Structure Of Human Lanosterol 14alpha-Demethylase
(C
Length = 461
Score = 28.5 bits (62), Expect = 6.1, Method: Compositional matrix adjust.
Identities = 17/82 (20%), Positives = 38/82 (46%), Gaps = 4/82 (4%)
Query: 284 IVISFTLADRDTTSAPLTWIFWLLFRNPEAETPILKEIR----EKSDAPVFEDIKDMVFT 339
++I LA + T+S W+ + L R+ + E + E ++ +KD+
Sbjct: 256 MLIGLLLAGQHTSSTTSAWMGFFLARDKTLQKKCYLEQKTVCGENLPPLTYDQLKDLNLL 315
Query: 340 HASLCESMRFYPPVPLDGKLAK 361
+ E++R PP+ + ++A+
Sbjct: 316 DRCIKETLRLRPPIMIMMRMAR 337
>pdb|1PQ2|A Chain A, Crystal Structure Of Human Drug Metabolizing Cytochrome
P450 2c8
pdb|1PQ2|B Chain B, Crystal Structure Of Human Drug Metabolizing Cytochrome
P450 2c8
pdb|2NNH|A Chain A, Cyp2c8dh Complexed With 2 Molecules Of 9-Cis Retinoic Acid
pdb|2NNH|B Chain B, Cyp2c8dh Complexed With 2 Molecules Of 9-Cis Retinoic Acid
pdb|2NNI|A Chain A, Cyp2c8dh Complexed With Montelukast
pdb|2NNJ|A Chain A, Cyp2c8dh Complexed With Felodipine
pdb|2VN0|A Chain A, Cyp2c8dh Complexed With Troglitazone
Length = 476
Score = 28.5 bits (62), Expect = 6.3, Method: Compositional matrix adjust.
Identities = 23/84 (27%), Positives = 37/84 (44%), Gaps = 3/84 (3%)
Query: 274 SSLQYERQLYIVISFTLADRDTTSAPLTWIFWLLFRNPEAETPILKEIRE---KSDAPVF 330
S E + V +A +TTS L + LL ++PE + +EI + +P
Sbjct: 262 SEFNIENLVGTVADLFVAGTETTSTTLRYGLLLLLKHPEVTAKVQEEIDHVIGRHRSPCM 321
Query: 331 EDIKDMVFTHASLCESMRFYPPVP 354
+D M +T A + E R+ VP
Sbjct: 322 QDRSHMPYTDAVVHEIQRYSDLVP 345
>pdb|4GQS|A Chain A, Structure Of Human Microsomal Cytochrome P450 (cyp) 2c19
pdb|4GQS|B Chain B, Structure Of Human Microsomal Cytochrome P450 (cyp) 2c19
pdb|4GQS|C Chain C, Structure Of Human Microsomal Cytochrome P450 (cyp) 2c19
pdb|4GQS|D Chain D, Structure Of Human Microsomal Cytochrome P450 (cyp) 2c19
Length = 477
Score = 28.5 bits (62), Expect = 7.4, Method: Compositional matrix adjust.
Identities = 25/91 (27%), Positives = 41/91 (45%), Gaps = 3/91 (3%)
Query: 291 ADRDTTSAPLTWIFWLLFRNPEAETPILKEIRE---KSDAPVFEDIKDMVFTHASLCESM 347
A +TTS L + LL ++PE + +EI ++ +P +D M +T A + E
Sbjct: 280 AGTETTSTTLRYALLLLLKHPEVTAKVQEEIERVVGRNRSPCMQDRGHMPYTDAVVHEVQ 339
Query: 348 RFYPPVPLDGKLAKKDDVWPDGKVIKKETRV 378
R+ +P A DV +I K T +
Sbjct: 340 RYIDLIPTSLPHAVTCDVKFRNYLIPKGTTI 370
Database: pdbaa
Posted date: Mar 3, 2013 10:34 PM
Number of letters in database: 14,973,337
Number of sequences in database: 62,578
Lambda K H
0.323 0.136 0.410
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 11,271,374
Number of Sequences: 62578
Number of extensions: 453266
Number of successful extensions: 1032
Number of sequences better than 100.0: 80
Number of HSP's better than 100.0 without gapping: 29
Number of HSP's successfully gapped in prelim test: 51
Number of HSP's that attempted gapping in prelim test: 993
Number of HSP's gapped (non-prelim): 88
length of query: 401
length of database: 14,973,337
effective HSP length: 101
effective length of query: 300
effective length of database: 8,652,959
effective search space: 2595887700
effective search space used: 2595887700
T: 11
A: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (22.0 bits)
S2: 52 (24.6 bits)